Query 021121
Match_columns 317
No_of_seqs 706 out of 1621
Neff 11.7
Searched_HMMs 29240
Date Mon Mar 25 13:03:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021121.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021121hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gqb_B Methylosome protein 50; 100.0 4.5E-53 1.5E-57 347.4 39.7 301 6-314 29-333 (344)
2 4g56_B MGC81050 protein; prote 100.0 1.5E-52 5.1E-57 346.7 36.5 301 6-314 41-345 (357)
3 1vyh_C Platelet-activating fac 100.0 5.2E-52 1.8E-56 349.8 39.4 285 6-311 107-410 (410)
4 3ow8_A WD repeat-containing pr 100.0 7.7E-52 2.6E-56 337.5 37.9 289 5-311 30-320 (321)
5 1got_B GT-beta; complex (GTP-b 100.0 1.3E-49 4.4E-54 327.3 41.5 284 6-309 54-340 (340)
6 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.8E-50 9.7E-55 331.8 37.2 296 6-315 14-338 (345)
7 2ynn_A Coatomer subunit beta'; 100.0 3E-49 1E-53 320.2 39.1 288 6-313 12-303 (304)
8 2pbi_B Guanine nucleotide-bind 100.0 9.7E-49 3.3E-53 323.6 41.1 286 6-309 63-354 (354)
9 3iz6_a 40S ribosomal protein R 100.0 7.7E-50 2.6E-54 333.5 34.2 294 6-316 65-379 (380)
10 2hes_X YDR267CP; beta-propelle 100.0 1.4E-48 4.7E-53 319.8 37.3 291 6-312 13-328 (330)
11 1erj_A Transcriptional repress 100.0 1E-47 3.5E-52 322.1 39.9 291 4-313 61-390 (393)
12 3frx_A Guanine nucleotide-bind 100.0 2.6E-47 8.8E-52 310.8 38.1 288 6-313 16-318 (319)
13 4ery_A WD repeat-containing pr 100.0 1.4E-46 4.7E-51 305.8 39.4 284 6-311 22-311 (312)
14 2ynn_A Coatomer subunit beta'; 100.0 6.5E-47 2.2E-51 306.4 36.4 248 57-313 10-260 (304)
15 2xzm_R RACK1; ribosome, transl 100.0 2.2E-46 7.4E-51 308.5 38.5 289 6-313 20-341 (343)
16 4gqb_B Methylosome protein 50; 100.0 7.7E-47 2.6E-51 310.3 35.2 252 4-270 79-333 (344)
17 1nr0_A Actin interacting prote 100.0 2.6E-46 8.8E-51 330.4 37.4 286 7-313 18-356 (611)
18 2pm9_A Protein WEB1, protein t 100.0 2.1E-47 7.3E-52 322.5 28.0 308 2-314 7-339 (416)
19 1gxr_A ESG1, transducin-like e 100.0 5.5E-45 1.9E-49 299.1 40.8 287 4-311 48-336 (337)
20 2pm9_A Protein WEB1, protein t 100.0 6.5E-47 2.2E-51 319.6 29.0 302 3-314 63-416 (416)
21 1nr0_A Actin interacting prote 100.0 1.4E-45 4.9E-50 325.6 38.1 288 5-312 57-397 (611)
22 1vyh_C Platelet-activating fac 100.0 1E-45 3.5E-50 311.4 35.3 247 56-313 104-370 (410)
23 2ymu_A WD-40 repeat protein; u 100.0 5.9E-45 2E-49 320.1 40.3 276 6-309 302-577 (577)
24 3ow8_A WD repeat-containing pr 100.0 1.1E-45 3.8E-50 301.1 32.6 248 58-313 30-280 (321)
25 3k26_A Polycomb protein EED; W 100.0 1E-45 3.4E-50 306.9 31.9 288 6-311 17-365 (366)
26 3i2n_A WD repeat-containing pr 100.0 3.1E-45 1E-49 303.1 34.0 296 6-314 17-355 (357)
27 4aow_A Guanine nucleotide-bind 100.0 2.6E-44 8.9E-49 295.6 38.1 292 6-315 37-340 (340)
28 1sq9_A Antiviral protein SKI8; 100.0 1.4E-44 4.8E-49 303.5 35.6 287 5-313 14-396 (397)
29 1k8k_C P40, ARP2/3 complex 41 100.0 8E-45 2.7E-49 302.3 32.8 290 6-313 7-362 (372)
30 4e54_B DNA damage-binding prot 100.0 1.7E-45 5.7E-50 312.7 28.3 292 6-313 118-431 (435)
31 3dm0_A Maltose-binding peripla 100.0 7.9E-44 2.7E-48 319.2 39.4 287 6-311 381-692 (694)
32 3vl1_A 26S proteasome regulato 100.0 6.4E-45 2.2E-49 307.9 30.6 283 10-313 59-366 (420)
33 2j04_B YDR362CP, TAU91; beta p 100.0 9.1E-45 3.1E-49 312.2 31.4 305 3-313 129-518 (524)
34 3ei3_B DNA damage-binding prot 100.0 5.7E-44 2E-48 298.5 35.3 285 6-312 72-382 (383)
35 2pm7_B Protein transport prote 100.0 1.8E-43 6.2E-48 285.3 36.3 253 57-313 6-286 (297)
36 1r5m_A SIR4-interacting protei 100.0 1.4E-43 4.9E-48 299.6 36.7 287 5-311 43-424 (425)
37 3zwl_B Eukaryotic translation 100.0 9E-43 3.1E-47 289.3 40.6 283 6-312 31-346 (369)
38 4aez_A CDC20, WD repeat-contai 100.0 4.9E-43 1.7E-47 294.6 39.3 282 9-314 95-382 (401)
39 3dwl_C Actin-related protein 2 100.0 2.4E-45 8.3E-50 306.2 24.9 288 6-310 10-377 (377)
40 4g56_B MGC81050 protein; prote 100.0 2.7E-44 9.4E-49 297.2 30.9 251 4-270 91-345 (357)
41 2xyi_A Probable histone-bindin 100.0 1.1E-43 3.7E-48 301.1 34.7 306 4-312 42-410 (430)
42 2ymu_A WD-40 repeat protein; u 100.0 6.8E-43 2.3E-47 307.0 40.8 279 6-312 261-539 (577)
43 4gga_A P55CDC, cell division c 100.0 1.8E-42 6.3E-47 292.8 41.2 287 3-312 101-395 (420)
44 3odt_A Protein DOA1; ubiquitin 100.0 1.6E-42 5.4E-47 281.7 39.3 281 6-314 17-298 (313)
45 4h5i_A Guanine nucleotide-exch 100.0 6.4E-44 2.2E-48 295.8 30.9 298 4-313 11-344 (365)
46 1got_B GT-beta; complex (GTP-b 100.0 6.7E-43 2.3E-47 287.3 35.3 245 57-313 52-302 (340)
47 1gxr_A ESG1, transducin-like e 100.0 5.4E-43 1.8E-47 287.3 34.5 287 6-314 8-298 (337)
48 4ery_A WD repeat-containing pr 100.0 1.5E-42 5.3E-47 281.9 35.7 250 56-314 19-270 (312)
49 3gre_A Serine/threonine-protei 100.0 4E-43 1.4E-47 298.5 32.4 289 6-309 62-437 (437)
50 3fm0_A Protein CIAO1; WDR39,SG 100.0 6.1E-43 2.1E-47 288.1 32.2 250 58-313 13-284 (345)
51 4ggc_A P55CDC, cell division c 100.0 3.3E-41 1.1E-45 274.6 40.6 284 7-313 25-316 (318)
52 3bg1_A Protein SEC13 homolog; 100.0 1.3E-43 4.4E-48 288.6 25.7 252 57-313 10-294 (316)
53 3frx_A Guanine nucleotide-bind 100.0 4.7E-42 1.6E-46 279.7 34.5 246 58-312 15-267 (319)
54 3iz6_a 40S ribosomal protein R 100.0 3E-43 1E-47 293.7 27.3 250 56-313 62-330 (380)
55 2aq5_A Coronin-1A; WD40 repeat 100.0 1E-42 3.4E-47 292.8 30.4 290 10-313 37-343 (402)
56 2pbi_B Guanine nucleotide-bind 100.0 1.7E-41 5.7E-46 280.3 36.5 247 57-313 61-316 (354)
57 3vl1_A 26S proteasome regulato 100.0 6.6E-42 2.2E-46 289.4 34.4 282 9-312 99-419 (420)
58 2hes_X YDR267CP; beta-propelle 100.0 1.6E-41 5.5E-46 277.9 33.9 246 58-313 12-281 (330)
59 3dw8_B Serine/threonine-protei 100.0 1.2E-41 4.1E-46 290.0 34.3 291 4-311 25-445 (447)
60 1erj_A Transcriptional repress 100.0 2.4E-41 8.1E-46 283.5 35.1 266 38-314 41-343 (393)
61 1yfq_A Cell cycle arrest prote 100.0 4.2E-41 1.4E-45 276.7 35.1 281 5-309 9-321 (342)
62 2pm7_B Protein transport prote 100.0 1.7E-40 5.8E-45 267.9 36.1 252 5-269 7-286 (297)
63 4a11_B DNA excision repair pro 100.0 3.4E-40 1.2E-44 277.6 39.1 293 6-314 42-367 (408)
64 3mkq_A Coatomer beta'-subunit; 100.0 1.2E-40 4.1E-45 303.9 38.1 289 6-313 12-303 (814)
65 2xzm_R RACK1; ribosome, transl 100.0 3.6E-40 1.2E-44 271.4 37.1 246 57-313 18-286 (343)
66 3f3f_A Nucleoporin SEH1; struc 100.0 2.3E-40 8E-45 272.5 32.7 255 57-314 8-339 (351)
67 3jrp_A Fusion protein of prote 100.0 1.8E-40 6.1E-45 276.6 31.2 251 57-312 8-287 (379)
68 3v7d_B Cell division control p 100.0 3.2E-39 1.1E-43 276.5 39.4 278 6-314 120-423 (464)
69 1p22_A F-BOX/WD-repeat protein 100.0 1.1E-39 3.6E-44 277.1 36.0 274 6-314 132-416 (435)
70 3bg1_A Protein SEC13 homolog; 100.0 5.1E-41 1.7E-45 273.3 25.7 251 5-268 11-293 (316)
71 3sfz_A APAF-1, apoptotic pepti 100.0 1.5E-39 5E-44 308.9 38.0 286 6-312 614-913 (1249)
72 1pgu_A Actin interacting prote 100.0 4.1E-39 1.4E-43 284.9 38.3 284 6-312 159-614 (615)
73 2oaj_A Protein SNI1; WD40 repe 100.0 5.8E-40 2E-44 300.0 33.3 293 4-313 95-606 (902)
74 1pgu_A Actin interacting prote 100.0 5.6E-39 1.9E-43 284.0 37.7 288 5-312 16-328 (615)
75 2oaj_A Protein SNI1; WD40 repe 100.0 4.6E-40 1.6E-44 300.7 31.5 233 4-258 14-297 (902)
76 2ovr_B FBW7, F-BOX/WD repeat p 100.0 3.6E-38 1.2E-42 268.6 39.8 276 6-315 158-445 (445)
77 3f3f_A Nucleoporin SEH1; struc 100.0 9E-39 3.1E-43 263.0 34.7 253 6-270 10-339 (351)
78 3dwl_C Actin-related protein 2 100.0 1.3E-40 4.3E-45 277.6 22.8 244 59-311 10-280 (377)
79 1k8k_C P40, ARP2/3 complex 41 100.0 6.9E-39 2.4E-43 266.5 32.9 246 58-312 6-274 (372)
80 3mmy_A MRNA export factor; mRN 100.0 1.3E-38 4.5E-43 264.1 34.1 285 6-311 38-345 (368)
81 3dm0_A Maltose-binding peripla 100.0 9E-39 3.1E-43 286.5 34.4 248 57-313 379-633 (694)
82 3v7d_B Cell division control p 100.0 7.7E-38 2.6E-42 267.9 38.1 280 6-311 161-462 (464)
83 3i2n_A WD repeat-containing pr 100.0 8.3E-39 2.8E-43 264.5 30.6 251 55-313 13-292 (357)
84 1sq9_A Antiviral protein SKI8; 100.0 7.5E-39 2.6E-43 268.7 30.0 245 58-313 14-323 (397)
85 3sfz_A APAF-1, apoptotic pepti 100.0 1.9E-38 6.5E-43 301.2 36.4 288 6-313 656-1035(1249)
86 2ovr_B FBW7, F-BOX/WD repeat p 100.0 2E-37 6.7E-42 264.0 39.0 273 6-314 117-393 (445)
87 3zwl_B Eukaryotic translation 100.0 1.3E-37 4.3E-42 258.3 36.7 251 51-313 23-305 (369)
88 2vdu_B TRNA (guanine-N(7)-)-me 100.0 9.2E-38 3.2E-42 266.3 36.7 285 8-313 5-392 (450)
89 4aow_A Guanine nucleotide-bind 100.0 1.2E-37 4.1E-42 255.9 35.7 249 57-313 35-287 (340)
90 2xyi_A Probable histone-bindin 100.0 4.5E-38 1.5E-42 266.6 34.0 259 4-269 125-411 (430)
91 1r5m_A SIR4-interacting protei 100.0 5.7E-38 1.9E-42 265.3 33.9 263 38-312 26-361 (425)
92 3mkq_A Coatomer beta'-subunit; 100.0 3.3E-38 1.1E-42 287.8 34.7 248 57-313 10-260 (814)
93 3jrp_A Fusion protein of prote 100.0 5.9E-38 2E-42 261.3 32.3 249 6-269 10-288 (379)
94 3dw8_B Serine/threonine-protei 100.0 8.8E-39 3E-43 272.3 27.4 250 58-314 26-375 (447)
95 3ei3_B DNA damage-binding prot 100.0 1.3E-37 4.6E-42 259.9 33.7 245 57-314 70-341 (383)
96 3k26_A Polycomb protein EED; W 100.0 1.7E-38 5.9E-43 263.3 28.1 248 58-313 16-319 (366)
97 4aez_A CDC20, WD repeat-contai 100.0 1.3E-37 4.4E-42 261.6 33.1 261 6-286 133-398 (401)
98 2j04_B YDR362CP, TAU91; beta p 100.0 4.7E-39 1.6E-43 276.7 24.6 250 56-312 129-428 (524)
99 3jro_A Fusion protein of prote 100.0 1.3E-38 4.3E-43 287.3 28.4 252 57-313 6-286 (753)
100 4gq1_A NUP37; propeller, trans 100.0 1.2E-38 4E-43 267.0 25.7 294 6-312 14-389 (393)
101 2aq5_A Coronin-1A; WD40 repeat 100.0 2.8E-38 9.5E-43 265.8 27.6 248 62-314 36-301 (402)
102 3gre_A Serine/threonine-protei 100.0 2.8E-38 9.7E-43 268.6 27.0 247 58-314 61-361 (437)
103 4e54_B DNA damage-binding prot 100.0 2.6E-38 8.9E-43 268.5 26.7 251 58-314 117-389 (435)
104 1yfq_A Cell cycle arrest prote 100.0 8.6E-38 2.9E-42 257.0 28.5 246 58-313 9-283 (342)
105 3vu4_A KMHSV2; beta-propeller 100.0 6.3E-37 2.1E-41 253.0 32.3 276 6-313 18-337 (355)
106 3odt_A Protein DOA1; ubiquitin 100.0 1.3E-36 4.4E-41 246.8 32.6 239 57-314 15-257 (313)
107 2j04_A TAU60, YPL007P, hypothe 100.0 8.9E-38 3E-42 263.5 25.7 263 5-311 13-296 (588)
108 3lrv_A PRE-mRNA-splicing facto 100.0 3.9E-37 1.3E-41 253.3 27.7 265 20-311 47-332 (343)
109 4h5i_A Guanine nucleotide-exch 100.0 1.4E-36 4.8E-41 251.7 30.6 250 6-269 72-344 (365)
110 4a11_B DNA excision repair pro 100.0 7.7E-36 2.6E-40 251.0 33.7 286 6-312 98-405 (408)
111 4gga_A P55CDC, cell division c 100.0 2.6E-35 8.8E-40 249.0 35.3 257 6-284 146-410 (420)
112 3jro_A Fusion protein of prote 100.0 2.4E-36 8.2E-41 272.4 28.9 252 5-270 7-287 (753)
113 3bws_A Protein LP49; two-domai 100.0 8.4E-35 2.9E-39 246.8 34.4 285 5-312 120-432 (433)
114 1l0q_A Surface layer protein; 100.0 2.2E-34 7.5E-39 241.1 35.4 268 22-313 3-276 (391)
115 2vdu_B TRNA (guanine-N(7)-)-me 100.0 6.5E-35 2.2E-39 248.7 32.4 242 61-310 5-337 (450)
116 1p22_A F-BOX/WD-repeat protein 100.0 8.9E-35 3E-39 246.9 32.8 232 58-312 131-365 (435)
117 3lrv_A PRE-mRNA-splicing facto 100.0 2E-35 6.8E-40 243.1 25.3 233 67-314 43-294 (343)
118 3mmy_A MRNA export factor; mRN 100.0 4.4E-34 1.5E-38 236.9 31.1 247 58-313 37-305 (368)
119 2j04_A TAU60, YPL007P, hypothe 100.0 5.2E-35 1.8E-39 246.8 23.9 256 6-301 51-350 (588)
120 3vu4_A KMHSV2; beta-propeller 100.0 5.6E-34 1.9E-38 235.4 29.3 236 57-313 16-272 (355)
121 3bws_A Protein LP49; two-domai 100.0 1.4E-33 4.6E-38 239.4 31.9 293 7-313 60-391 (433)
122 1l0q_A Surface layer protein; 100.0 1.4E-32 4.9E-37 230.1 37.7 288 4-313 28-343 (391)
123 2w18_A PALB2, fancn, partner a 100.0 8.6E-33 3E-37 219.7 33.5 264 36-311 62-356 (356)
124 4ggc_A P55CDC, cell division c 100.0 1.5E-32 5.2E-37 223.4 35.0 244 6-270 66-317 (318)
125 4gq1_A NUP37; propeller, trans 100.0 4.1E-34 1.4E-38 239.4 22.5 235 20-267 100-388 (393)
126 2w18_A PALB2, fancn, partner a 100.0 7.5E-31 2.6E-35 208.6 27.9 244 6-266 85-355 (356)
127 2hqs_A Protein TOLB; TOLB, PAL 100.0 9.4E-30 3.2E-34 214.2 29.6 285 8-313 63-388 (415)
128 1nir_A Nitrite reductase; hemo 100.0 1.7E-28 5.9E-33 212.6 34.7 287 7-313 178-515 (543)
129 1nir_A Nitrite reductase; hemo 100.0 2.5E-28 8.4E-33 211.7 33.7 278 14-314 144-460 (543)
130 1ri6_A Putative isomerase YBHE 100.0 4.6E-28 1.6E-32 198.9 30.6 269 36-312 14-308 (343)
131 3u4y_A Uncharacterized protein 100.0 1.7E-27 5.7E-32 194.8 32.3 281 14-313 4-305 (331)
132 2hqs_A Protein TOLB; TOLB, PAL 100.0 3.2E-27 1.1E-31 198.8 34.2 235 37-291 159-408 (415)
133 3vgz_A Uncharacterized protein 100.0 4.7E-27 1.6E-31 193.8 33.8 280 6-302 39-334 (353)
134 2ecf_A Dipeptidyl peptidase IV 100.0 9.3E-28 3.2E-32 216.9 29.9 286 7-312 36-413 (741)
135 2ojh_A Uncharacterized protein 100.0 2.1E-27 7.1E-32 190.8 26.7 252 36-303 21-293 (297)
136 1xfd_A DIP, dipeptidyl aminope 100.0 1.3E-27 4.6E-32 215.3 27.3 286 8-313 17-394 (723)
137 3hfq_A Uncharacterized protein 100.0 5.4E-26 1.8E-30 187.2 31.5 271 36-312 15-317 (347)
138 1pby_B Quinohemoprotein amine 100.0 1.6E-26 5.4E-31 189.3 27.0 259 36-314 10-312 (337)
139 2z3z_A Dipeptidyl aminopeptida 100.0 3.2E-26 1.1E-30 205.8 31.3 281 8-313 82-436 (706)
140 1ri6_A Putative isomerase YBHE 100.0 6.8E-26 2.3E-30 185.9 30.5 274 4-291 34-333 (343)
141 2ecf_A Dipeptidyl peptidase IV 100.0 3.6E-26 1.2E-30 206.5 28.2 281 9-312 110-459 (741)
142 2oit_A Nucleoporin 214KDA; NH2 100.0 1.1E-25 3.7E-30 190.1 29.0 246 8-266 37-331 (434)
143 3o4h_A Acylamino-acid-releasin 100.0 8.5E-26 2.9E-30 198.6 27.2 274 7-312 21-315 (582)
144 2oit_A Nucleoporin 214KDA; NH2 99.9 1.4E-25 4.9E-30 189.4 25.0 203 61-269 37-279 (434)
145 3vgz_A Uncharacterized protein 99.9 1.4E-24 4.9E-29 178.9 29.0 245 58-313 38-304 (353)
146 1k32_A Tricorn protease; prote 99.9 7E-25 2.4E-29 204.6 29.9 277 7-314 295-639 (1045)
147 1k32_A Tricorn protease; prote 99.9 4.9E-25 1.7E-29 205.7 28.7 276 6-311 202-501 (1045)
148 3scy_A Hypothetical bacterial 99.9 6.6E-24 2.3E-28 175.6 31.9 269 36-312 26-337 (361)
149 2ojh_A Uncharacterized protein 99.9 4.9E-25 1.7E-29 176.9 23.6 225 79-314 18-260 (297)
150 2z3z_A Dipeptidyl aminopeptida 99.9 3.5E-25 1.2E-29 199.0 24.2 280 9-312 27-391 (706)
151 3u4y_A Uncharacterized protein 99.9 4.5E-24 1.5E-28 174.5 27.5 239 66-313 3-253 (331)
152 1jmx_B Amine dehydrogenase; ox 99.9 4.9E-24 1.7E-28 175.3 27.2 274 12-313 4-326 (349)
153 1xfd_A DIP, dipeptidyl aminope 99.9 3.7E-24 1.3E-28 192.8 26.8 282 9-302 62-431 (723)
154 3scy_A Hypothetical bacterial 99.9 1.8E-22 6.1E-27 167.0 34.0 272 6-289 48-360 (361)
155 3hfq_A Uncharacterized protein 99.9 1.5E-22 5.2E-27 166.5 33.1 249 6-267 38-316 (347)
156 1jof_A Carboxy-CIS,CIS-muconat 99.9 2.3E-22 7.9E-27 166.6 30.8 267 37-313 14-342 (365)
157 1z68_A Fibroblast activation p 99.9 7E-24 2.4E-28 190.9 22.2 277 11-312 19-391 (719)
158 3o4h_A Acylamino-acid-releasin 99.9 6.2E-24 2.1E-28 186.7 21.3 233 60-310 21-274 (582)
159 1pby_B Quinohemoprotein amine 99.9 1.7E-22 5.9E-27 165.2 26.8 246 9-279 35-320 (337)
160 1z68_A Fibroblast activation p 99.9 1.8E-21 6.1E-26 175.3 24.8 287 9-313 61-444 (719)
161 3pe7_A Oligogalacturonate lyas 99.9 4.7E-21 1.6E-25 159.9 25.4 280 13-314 41-384 (388)
162 1jof_A Carboxy-CIS,CIS-muconat 99.9 5.7E-20 1.9E-24 152.2 29.4 243 9-269 41-342 (365)
163 3azo_A Aminopeptidase; POP fam 99.9 5.2E-20 1.8E-24 164.3 28.1 282 6-310 22-365 (662)
164 3fvz_A Peptidyl-glycine alpha- 99.9 1.2E-19 4.2E-24 148.0 28.1 244 60-313 23-323 (329)
165 4a5s_A Dipeptidyl peptidase 4 99.9 1.4E-19 4.6E-24 163.3 29.5 278 9-311 18-397 (740)
166 1q7f_A NHL, brain tumor CG1071 99.9 7.2E-19 2.5E-23 140.6 29.7 237 60-313 29-281 (286)
167 3c5m_A Oligogalacturonate lyas 99.9 5.8E-20 2E-24 153.6 22.3 278 10-312 38-382 (396)
168 2oiz_A Aromatic amine dehydrog 99.9 1.9E-18 6.4E-23 142.6 29.6 260 35-313 29-335 (361)
169 3fvz_A Peptidyl-glycine alpha- 99.9 6.7E-18 2.3E-22 137.7 32.5 249 8-269 24-323 (329)
170 2z2n_A Virginiamycin B lyase; 99.9 5.3E-17 1.8E-21 130.4 36.4 280 8-313 15-296 (299)
171 4a5s_A Dipeptidyl peptidase 4 99.9 1.4E-19 4.8E-24 163.3 22.9 239 62-313 18-354 (740)
172 3pe7_A Oligogalacturonate lyas 99.9 2.2E-18 7.4E-23 143.8 28.5 239 66-313 41-330 (388)
173 1q7f_A NHL, brain tumor CG1071 99.8 1.1E-17 3.6E-22 133.8 30.2 238 8-269 30-281 (286)
174 1jmx_B Amine dehydrogenase; ox 99.8 5.3E-19 1.8E-23 145.2 22.8 235 65-313 4-285 (349)
175 2dg1_A DRP35, lactonase; beta 99.8 1.6E-17 5.5E-22 135.7 30.6 269 7-302 5-300 (333)
176 2gop_A Trilobed protease; beta 99.8 2.1E-17 7.2E-22 135.7 29.8 265 8-311 15-330 (347)
177 3azo_A Aminopeptidase; POP fam 99.8 2.9E-18 1E-22 152.9 26.2 243 58-311 21-322 (662)
178 3e5z_A Putative gluconolactona 99.8 7.4E-17 2.5E-21 129.5 30.1 229 58-303 25-278 (296)
179 1rwi_B Serine/threonine-protei 99.8 1.4E-17 4.7E-22 131.9 24.7 241 62-315 25-267 (270)
180 2oiz_A Aromatic amine dehydrog 99.8 5E-17 1.7E-21 134.1 27.3 263 12-292 54-359 (361)
181 2dg1_A DRP35, lactonase; beta 99.8 2E-17 7E-22 135.1 23.7 237 61-311 6-262 (333)
182 3dsm_A Uncharacterized protein 99.8 1.4E-16 4.7E-21 129.8 28.0 261 36-311 16-301 (328)
183 2qc5_A Streptogramin B lactona 99.8 1.8E-15 6.3E-20 121.4 34.1 278 7-310 19-298 (300)
184 1rwi_B Serine/threonine-protei 99.8 1.2E-16 4.1E-21 126.5 26.7 240 9-270 25-266 (270)
185 1qks_A Cytochrome CD1 nitrite 99.8 3.4E-15 1.2E-19 129.4 36.5 295 4-313 193-539 (567)
186 2xdw_A Prolyl endopeptidase; a 99.8 2.3E-16 7.7E-21 141.8 29.9 242 62-314 126-416 (710)
187 1qks_A Cytochrome CD1 nitrite 99.8 1.8E-15 6.1E-20 131.1 34.1 281 15-313 161-478 (567)
188 2xdw_A Prolyl endopeptidase; a 99.8 3.8E-16 1.3E-20 140.3 30.6 245 9-270 126-416 (710)
189 3c5m_A Oligogalacturonate lyas 99.8 8.2E-18 2.8E-22 140.6 17.6 235 63-313 38-330 (396)
190 2bkl_A Prolyl endopeptidase; m 99.8 9.3E-17 3.2E-21 143.9 25.5 245 59-314 119-399 (695)
191 3no2_A Uncharacterized protein 99.8 5.9E-16 2E-20 122.6 26.5 210 74-299 6-230 (276)
192 3e5z_A Putative gluconolactona 99.8 9.8E-16 3.3E-20 123.0 27.2 233 8-269 28-287 (296)
193 2z2n_A Virginiamycin B lyase; 99.8 5.8E-15 2E-19 118.4 30.7 237 60-311 14-254 (299)
194 3dsm_A Uncharacterized protein 99.7 5E-15 1.7E-19 120.6 28.6 253 9-288 45-319 (328)
195 2bkl_A Prolyl endopeptidase; m 99.7 9.3E-16 3.2E-20 137.4 25.3 249 8-270 121-399 (695)
196 1yr2_A Prolyl oligopeptidase; 99.7 2.7E-15 9.1E-20 135.4 27.6 241 61-313 163-442 (741)
197 2gop_A Trilobed protease; beta 99.7 7.2E-15 2.5E-19 120.6 27.9 227 9-267 60-330 (347)
198 1pjx_A Dfpase, DIISOPROPYLFLUO 99.7 1.3E-14 4.6E-19 117.2 28.2 240 59-313 16-300 (314)
199 1pjx_A Dfpase, DIISOPROPYLFLUO 99.7 2.1E-14 7E-19 116.1 28.4 242 9-269 19-300 (314)
200 2mad_H Methylamine dehydrogena 99.7 1.7E-13 6E-18 113.1 34.2 257 38-314 48-352 (373)
201 3no2_A Uncharacterized protein 99.7 1.7E-14 5.9E-19 114.1 27.1 234 20-278 4-261 (276)
202 3hrp_A Uncharacterized protein 99.7 4.3E-14 1.5E-18 118.3 28.0 235 62-311 132-409 (409)
203 2qc5_A Streptogramin B lactona 99.7 1.8E-13 6.3E-18 109.6 30.8 239 60-311 19-259 (300)
204 3g4e_A Regucalcin; six bladed 99.7 9.2E-14 3.1E-18 111.5 28.3 225 62-300 14-261 (297)
205 3g4e_A Regucalcin; six bladed 99.7 1.5E-13 5.2E-18 110.2 29.5 228 10-258 15-263 (297)
206 1xip_A Nucleoporin NUP159; bet 99.7 3.4E-14 1.2E-18 116.5 25.5 174 62-254 39-230 (388)
207 3hrp_A Uncharacterized protein 99.7 1.7E-13 5.7E-18 114.7 29.4 234 9-266 132-408 (409)
208 1xip_A Nucleoporin NUP159; bet 99.7 4.2E-14 1.4E-18 116.0 24.7 174 9-210 39-230 (388)
209 3sjl_D Methylamine dehydrogena 99.7 3.3E-13 1.1E-17 110.2 27.7 262 36-314 58-365 (386)
210 1yr2_A Prolyl oligopeptidase; 99.7 2.7E-13 9.2E-18 122.4 29.7 246 9-270 164-443 (741)
211 3c75_H MADH, methylamine dehyd 99.7 2.9E-13 9.9E-18 112.5 27.4 260 37-314 99-404 (426)
212 2ghs_A AGR_C_1268P; regucalcin 99.6 3.8E-12 1.3E-16 103.4 30.4 226 10-259 51-294 (326)
213 2ghs_A AGR_C_1268P; regucalcin 99.6 4.9E-12 1.7E-16 102.8 29.7 224 63-302 51-293 (326)
214 2qe8_A Uncharacterized protein 99.6 8.6E-13 2.9E-17 108.0 23.8 244 51-304 9-313 (343)
215 3dr2_A Exported gluconolactona 99.6 4.7E-12 1.6E-16 101.9 27.1 228 58-303 42-298 (305)
216 2mad_H Methylamine dehydrogena 99.6 4E-11 1.4E-15 99.0 32.3 244 12-272 70-354 (373)
217 2ece_A 462AA long hypothetical 99.6 1.8E-11 6.3E-16 100.8 28.6 260 36-300 42-399 (462)
218 3sjl_D Methylamine dehydrogena 99.6 6.1E-12 2.1E-16 102.8 25.0 262 12-291 82-384 (386)
219 3iuj_A Prolyl endopeptidase; h 99.5 3.3E-12 1.1E-16 114.3 25.3 248 8-270 129-407 (693)
220 3iuj_A Prolyl endopeptidase; h 99.5 4.7E-12 1.6E-16 113.3 26.1 243 59-313 127-406 (693)
221 1mda_H Methylamine dehydrogena 99.5 7.9E-13 2.7E-17 108.1 19.1 269 14-313 25-347 (368)
222 1npe_A Nidogen, entactin; glyc 99.5 6.1E-10 2.1E-14 87.7 31.2 247 36-291 9-261 (267)
223 3dr2_A Exported gluconolactona 99.5 5.3E-11 1.8E-15 95.7 25.2 224 9-259 46-298 (305)
224 2qe8_A Uncharacterized protein 99.4 1.4E-11 4.9E-16 100.7 18.9 242 8-265 17-318 (343)
225 1kb0_A Quinohemoprotein alcoho 99.4 2.3E-10 7.9E-15 101.8 27.5 195 111-311 247-566 (677)
226 3c75_H MADH, methylamine dehyd 99.4 6.4E-11 2.2E-15 98.5 22.3 249 12-276 122-409 (426)
227 1yiq_A Quinohemoprotein alcoho 99.4 1.8E-10 6.1E-15 102.7 26.5 252 36-299 130-536 (689)
228 1yiq_A Quinohemoprotein alcoho 99.4 2.1E-10 7.2E-15 102.2 26.4 228 74-314 122-507 (689)
229 3q7m_A Lipoprotein YFGL, BAMB; 99.4 1.1E-09 3.7E-14 90.8 28.4 248 36-309 112-375 (376)
230 1npe_A Nidogen, entactin; glyc 99.4 6.6E-09 2.3E-13 81.7 30.9 233 75-313 3-239 (267)
231 3hxj_A Pyrrolo-quinoline quino 99.4 8.9E-11 3E-15 95.4 20.6 220 74-315 108-327 (330)
232 3q7m_A Lipoprotein YFGL, BAMB; 99.4 3.8E-09 1.3E-13 87.5 30.6 258 36-314 62-339 (376)
233 1kb0_A Quinohemoprotein alcoho 99.4 5.3E-10 1.8E-14 99.5 26.3 229 74-314 129-509 (677)
234 2hz6_A Endoplasmic reticulum t 99.4 5E-13 1.7E-17 110.4 5.6 181 74-271 10-195 (369)
235 2hz6_A Endoplasmic reticulum t 99.3 6.7E-13 2.3E-17 109.6 5.7 180 121-314 11-194 (369)
236 2iwa_A Glutamine cyclotransfer 99.3 1.4E-09 4.7E-14 84.4 23.4 206 53-270 11-239 (266)
237 2ece_A 462AA long hypothetical 99.3 9.9E-10 3.4E-14 90.6 23.1 223 20-255 94-399 (462)
238 3v64_C Agrin; beta propeller, 99.3 5.3E-08 1.8E-12 79.6 33.4 225 36-270 52-277 (349)
239 2iwa_A Glutamine cyclotransfer 99.3 6.8E-10 2.3E-14 86.1 20.3 196 108-313 22-238 (266)
240 3hxj_A Pyrrolo-quinoline quino 99.3 2.6E-10 8.9E-15 92.6 18.4 253 20-310 30-282 (330)
241 1mda_H Methylamine dehydrogena 99.3 2E-10 6.8E-15 94.0 17.5 252 12-289 69-365 (368)
242 3v65_B Low-density lipoprotein 99.3 3.5E-08 1.2E-12 81.8 30.6 225 36-270 95-320 (386)
243 1ijq_A LDL receptor, low-densi 99.2 2.7E-07 9.2E-12 74.4 33.0 227 36-270 9-240 (316)
244 3nol_A Glutamine cyclotransfer 99.2 8.5E-09 2.9E-13 79.0 21.7 190 53-257 33-245 (262)
245 3nol_A Glutamine cyclotransfer 99.2 6E-09 2E-13 79.9 19.3 181 108-300 44-244 (262)
246 3v64_C Agrin; beta propeller, 99.2 5.4E-07 1.8E-11 73.6 32.1 237 62-309 35-272 (349)
247 3v65_B Low-density lipoprotein 99.2 1.9E-07 6.4E-12 77.5 29.7 237 63-310 79-316 (386)
248 1fwx_A Nitrous oxide reductase 99.2 4.7E-09 1.6E-13 89.7 20.1 234 20-270 100-433 (595)
249 3nok_A Glutaminyl cyclase; bet 99.2 2.5E-08 8.6E-13 76.4 22.0 188 54-257 46-255 (268)
250 3p5b_L Low density lipoprotein 99.2 1.3E-06 4.4E-11 72.7 34.2 228 36-270 91-322 (400)
251 2fp8_A Strictosidine synthase; 99.1 3E-07 1E-11 74.3 29.1 235 62-313 20-314 (322)
252 1ijq_A LDL receptor, low-densi 99.1 6.7E-07 2.3E-11 72.0 30.8 228 75-311 3-237 (316)
253 3nok_A Glutaminyl cyclase; bet 99.1 1.3E-08 4.5E-13 78.0 19.4 179 108-300 56-254 (268)
254 1fwx_A Nitrous oxide reductase 99.1 5.1E-09 1.8E-13 89.4 18.9 233 71-313 100-432 (595)
255 3sov_A LRP-6, low-density lipo 99.1 5.5E-07 1.9E-11 72.5 30.0 228 36-270 12-240 (318)
256 3mbr_X Glutamine cyclotransfer 99.1 6.3E-08 2.1E-12 73.6 22.5 191 53-257 11-224 (243)
257 4a2l_A BT_4663, two-component 99.1 1.3E-06 4.3E-11 79.7 35.4 271 10-312 175-480 (795)
258 2p4o_A Hypothetical protein; p 99.1 2.1E-07 7.4E-12 74.6 27.1 233 53-299 24-276 (306)
259 4a2l_A BT_4663, two-component 99.1 1.4E-06 4.9E-11 79.3 35.6 272 8-312 263-571 (795)
260 1kv9_A Type II quinohemoprotei 99.1 1.1E-07 3.6E-12 84.7 27.0 228 74-314 118-490 (668)
261 1kv9_A Type II quinohemoprotei 99.1 1.5E-07 5.1E-12 83.7 26.8 183 111-300 234-520 (668)
262 3mbr_X Glutamine cyclotransfer 99.1 2.2E-07 7.6E-12 70.6 23.1 188 4-211 15-222 (243)
263 2p4o_A Hypothetical protein; p 99.1 2.8E-07 9.5E-12 74.0 24.8 227 8-256 32-277 (306)
264 3p5b_L Low density lipoprotein 99.1 3.4E-06 1.2E-10 70.2 31.9 228 75-311 85-319 (400)
265 1k3i_A Galactose oxidase precu 99.0 4E-08 1.4E-12 87.4 21.1 278 11-301 189-530 (656)
266 3m0c_C LDL receptor, low-densi 99.0 2.6E-06 8.8E-11 76.7 32.1 228 36-270 403-634 (791)
267 2ad6_A Methanol dehydrogenase 99.0 5.2E-07 1.8E-11 78.7 27.0 181 112-299 240-525 (571)
268 3v9f_A Two-component system se 99.0 3.2E-06 1.1E-10 76.9 32.8 274 8-312 258-568 (781)
269 1w6s_A Methanol dehydrogenase 99.0 1.2E-06 4.1E-11 76.5 28.4 181 112-298 246-533 (599)
270 2fp8_A Strictosidine synthase; 99.0 8.9E-07 3E-11 71.5 26.1 239 9-269 20-314 (322)
271 3sov_A LRP-6, low-density lipo 99.0 2.9E-06 9.8E-11 68.3 28.6 231 75-312 6-238 (318)
272 3qqz_A Putative uncharacterize 99.0 1.9E-06 6.5E-11 66.4 26.1 201 102-309 22-250 (255)
273 3qqz_A Putative uncharacterize 99.0 2E-06 6.9E-11 66.3 25.2 197 59-265 25-250 (255)
274 2xe4_A Oligopeptidase B; hydro 99.0 3.6E-06 1.2E-10 76.1 30.3 247 9-270 175-460 (751)
275 3v9f_A Two-component system se 98.9 7.7E-06 2.6E-10 74.4 32.2 276 8-312 211-524 (781)
276 2xe4_A Oligopeptidase B; hydro 98.9 1.2E-06 4.1E-11 79.2 26.5 192 62-265 175-395 (751)
277 1w6s_A Methanol dehydrogenase 98.9 4.7E-06 1.6E-10 72.8 29.2 225 76-314 124-505 (599)
278 4a0p_A LRP6, LRP-6, low-densit 98.9 2E-05 6.8E-10 69.4 33.1 225 36-270 14-239 (628)
279 1flg_A Protein (quinoprotein e 98.9 6.5E-06 2.2E-10 71.9 29.4 166 129-299 291-547 (582)
280 2ad6_A Methanol dehydrogenase 98.9 3.8E-06 1.3E-10 73.3 27.7 227 74-314 116-496 (571)
281 1flg_A Protein (quinoprotein e 98.9 9.4E-06 3.2E-10 70.9 30.0 230 74-314 118-518 (582)
282 3tc9_A Hypothetical hydrolase; 98.9 6.3E-06 2.2E-10 69.3 27.1 237 62-311 138-429 (430)
283 3m0c_C LDL receptor, low-densi 98.9 1.4E-05 4.7E-10 72.1 30.2 227 75-310 397-630 (791)
284 3tc9_A Hypothetical hydrolase; 98.8 1.8E-05 6E-10 66.6 28.2 241 9-267 138-429 (430)
285 4hw6_A Hypothetical protein, I 98.8 1.6E-05 5.6E-10 66.8 27.3 239 62-311 140-432 (433)
286 1n7d_A LDL receptor, low-densi 98.8 6.3E-08 2.1E-12 86.4 13.0 228 36-270 385-616 (699)
287 4a0p_A LRP6, LRP-6, low-densit 98.8 7.1E-05 2.4E-09 65.9 31.9 228 75-312 8-237 (628)
288 3kya_A Putative phosphatase; s 98.8 1.3E-05 4.5E-10 67.8 25.9 240 63-313 141-476 (496)
289 3s94_A LRP-6, low-density lipo 98.8 7.8E-05 2.7E-09 65.6 33.2 162 8-181 40-202 (619)
290 2xbg_A YCF48-like protein; pho 98.7 4.5E-05 1.6E-09 61.6 33.2 274 7-310 35-320 (327)
291 1k3i_A Galactose oxidase precu 98.7 1.1E-06 3.8E-11 78.2 18.6 240 64-312 189-497 (656)
292 3kya_A Putative phosphatase; s 98.7 6.2E-05 2.1E-09 63.7 27.9 246 9-270 140-477 (496)
293 4hw6_A Hypothetical protein, I 98.7 7.1E-05 2.4E-09 62.9 28.0 238 9-267 140-432 (433)
294 1n7d_A LDL receptor, low-densi 98.6 4.5E-07 1.5E-11 81.0 12.7 222 82-311 385-613 (699)
295 2ism_A Putative oxidoreductase 98.5 0.00015 5.1E-09 59.2 25.2 227 8-254 31-331 (352)
296 2p9w_A MAL S 1 allergenic prot 98.5 0.00027 9.4E-09 56.1 23.9 159 106-269 12-216 (334)
297 3amr_A 3-phytase; beta-propell 98.4 0.00031 1.1E-08 56.3 22.9 194 74-276 41-271 (355)
298 3ei3_A DNA damage-binding prot 98.4 0.0018 6.2E-08 61.1 35.4 288 6-314 552-915 (1158)
299 2p9w_A MAL S 1 allergenic prot 98.4 0.00022 7.4E-09 56.7 20.6 199 63-268 15-265 (334)
300 2ism_A Putative oxidoreductase 98.4 0.00067 2.3E-08 55.3 24.9 229 60-299 30-332 (352)
301 3amr_A 3-phytase; beta-propell 98.3 0.00049 1.7E-08 55.2 22.6 187 121-312 42-263 (355)
302 3s94_A LRP-6, low-density lipo 98.3 0.0014 4.9E-08 57.6 34.0 227 36-269 325-552 (619)
303 3a9g_A Putative uncharacterize 98.1 0.0023 7.8E-08 52.2 25.8 233 8-255 29-329 (354)
304 3sre_A PON1, serum paraoxonase 98.1 0.0024 8.2E-08 51.8 22.4 205 10-221 52-295 (355)
305 3sre_A PON1, serum paraoxonase 98.0 0.0034 1.2E-07 50.9 22.7 186 109-302 52-287 (355)
306 3ii7_A Kelch-like protein 7; p 98.0 0.0021 7.3E-08 51.1 20.1 223 74-313 13-273 (306)
307 2vpj_A Kelch-like protein 12; 98.0 0.0019 6.6E-08 51.2 19.1 221 74-312 16-278 (301)
308 2xn4_A Kelch-like protein 2; s 97.9 0.002 6.9E-08 51.2 18.9 183 117-313 61-277 (302)
309 3ei3_A DNA damage-binding prot 97.9 0.015 5E-07 55.1 35.3 208 36-253 531-753 (1158)
310 3a9g_A Putative uncharacterize 97.9 0.0056 1.9E-07 49.9 27.7 232 60-300 28-330 (354)
311 2xbg_A YCF48-like protein; pho 97.9 0.0052 1.8E-07 49.5 30.9 229 59-305 34-272 (327)
312 2vpj_A Kelch-like protein 12; 97.9 0.0064 2.2E-07 48.2 22.1 216 37-270 31-280 (301)
313 3ii7_A Kelch-like protein 7; p 97.8 0.0067 2.3E-07 48.2 20.5 216 36-270 23-274 (306)
314 2uvk_A YJHT; unknown function, 97.8 0.0074 2.5E-07 49.2 20.4 136 129-271 168-345 (357)
315 3b7f_A Glycosyl hydrolase, BNR 97.8 0.013 4.3E-07 48.6 30.6 274 20-306 22-366 (394)
316 2xn4_A Kelch-like protein 2; s 97.7 0.0056 1.9E-07 48.6 18.5 216 37-270 30-278 (302)
317 2g8s_A Glucose/sorbosone dehyd 97.7 0.014 4.7E-07 47.5 24.4 234 8-254 18-339 (353)
318 4asc_A Kelch repeat and BTB do 97.7 0.0082 2.8E-07 48.0 18.5 181 75-270 7-223 (315)
319 3pbp_A Nucleoporin NUP82; beta 97.6 0.015 5E-07 47.9 18.8 141 162-307 32-207 (452)
320 2g8s_A Glucose/sorbosone dehyd 97.6 0.02 6.7E-07 46.7 24.0 240 62-311 19-351 (353)
321 1zgk_A Kelch-like ECH-associat 97.6 0.0075 2.6E-07 48.0 17.0 222 74-313 26-288 (308)
322 3pbp_A Nucleoporin NUP82; beta 97.6 0.019 6.5E-07 47.3 18.7 137 36-177 40-208 (452)
323 4asc_A Kelch repeat and BTB do 97.5 0.016 5.5E-07 46.2 18.3 215 37-270 13-279 (315)
324 1zgk_A Kelch-like ECH-associat 97.5 0.012 4.2E-07 46.7 17.3 216 37-270 39-289 (308)
325 3das_A Putative oxidoreductase 97.5 0.027 9.1E-07 45.5 26.7 236 8-259 32-330 (347)
326 2xzh_A Clathrin heavy chain 1; 97.5 0.025 8.4E-07 44.9 29.4 237 12-270 71-334 (365)
327 2woz_A Kelch repeat and BTB do 97.5 0.026 8.8E-07 45.1 18.7 181 75-270 18-233 (318)
328 1bpo_A Protein (clathrin); cla 97.4 0.037 1.2E-06 45.8 28.9 236 12-269 70-332 (494)
329 3b7f_A Glycosyl hydrolase, BNR 97.4 0.046 1.6E-06 45.2 27.5 270 7-289 54-391 (394)
330 2xzh_A Clathrin heavy chain 1; 97.3 0.043 1.5E-06 43.6 33.9 258 36-312 48-332 (365)
331 1bpo_A Protein (clathrin); cla 97.3 0.056 1.9E-06 44.7 34.0 257 36-312 47-331 (494)
332 1tl2_A L10, protein (tachylect 97.2 0.034 1.2E-06 41.4 16.9 177 121-313 6-209 (236)
333 2woz_A Kelch repeat and BTB do 97.2 0.054 1.8E-06 43.2 19.7 214 38-270 25-289 (318)
334 3ott_A Two-component system se 97.2 0.12 4.1E-06 46.8 28.1 228 60-312 21-260 (758)
335 1tl2_A L10, protein (tachylect 97.1 0.051 1.7E-06 40.5 16.5 147 107-267 41-207 (236)
336 1cru_A Protein (soluble quinop 97.1 0.11 3.7E-06 43.9 29.4 107 8-125 27-161 (454)
337 2uvk_A YJHT; unknown function, 97.0 0.038 1.3E-06 44.9 15.7 92 74-171 21-128 (357)
338 1xi4_A Clathrin heavy chain; a 97.0 0.16 5.4E-06 48.6 20.3 234 12-267 70-330 (1630)
339 2be1_A Serine/threonine-protei 96.7 0.12 4.3E-06 41.4 15.6 191 74-271 11-234 (339)
340 1sqj_A OXG-RCBH, oligoxylogluc 96.6 0.41 1.4E-05 43.6 23.6 153 60-214 14-190 (789)
341 1xi4_A Clathrin heavy chain; a 96.4 0.41 1.4E-05 46.0 18.7 205 4-224 102-331 (1630)
342 2cn3_A Xyloglucanase, beta-1,4 96.3 0.59 2E-05 42.2 27.8 237 9-258 24-322 (737)
343 1sqj_A OXG-RCBH, oligoxylogluc 96.3 0.62 2.1E-05 42.4 23.1 158 7-174 14-194 (789)
344 2zwa_A Leucine carboxyl methyl 96.2 0.33 1.1E-05 43.5 16.6 191 74-270 399-637 (695)
345 3das_A Putative oxidoreductase 96.1 0.43 1.5E-05 38.5 25.5 231 60-299 31-325 (347)
346 2be1_A Serine/threonine-protei 96.1 0.2 6.7E-06 40.3 13.3 111 121-233 12-138 (339)
347 2zwa_A Leucine carboxyl methyl 96.0 0.79 2.7E-05 41.1 18.7 187 121-313 400-636 (695)
348 1cru_A Protein (soluble quinop 95.9 0.65 2.2E-05 39.2 21.4 105 150-255 27-162 (454)
349 3s25_A Hypothetical 7-bladed b 95.9 0.47 1.6E-05 37.5 19.3 175 113-311 59-254 (302)
350 3s25_A Hypothetical 7-bladed b 95.8 0.53 1.8E-05 37.2 25.1 176 113-311 110-292 (302)
351 3ott_A Two-component system se 95.5 1.4 4.7E-05 39.9 35.0 269 9-310 147-446 (758)
352 2cn3_A Xyloglucanase, beta-1,4 93.9 3.6 0.00012 37.1 25.5 109 62-171 24-153 (737)
353 2wg3_C Hedgehog-interacting pr 93.9 2.6 9E-05 35.5 30.2 245 62-312 15-371 (463)
354 2wg3_C Hedgehog-interacting pr 93.8 2.7 9.1E-05 35.5 28.1 111 8-126 14-157 (463)
355 3qhy_B Beta-lactamase inhibito 93.8 1.9 6.4E-05 33.6 24.1 223 61-312 24-246 (282)
356 3qhy_B Beta-lactamase inhibito 92.5 3 0.0001 32.5 24.6 223 36-290 41-263 (282)
357 3sbq_A Nitrous-oxide reductase 92.2 5.3 0.00018 34.5 22.7 73 238-312 324-408 (638)
358 3sbq_A Nitrous-oxide reductase 91.7 6 0.0002 34.2 20.1 73 150-224 323-408 (638)
359 3kci_A Probable E3 ubiquitin-p 82.6 18 0.00063 29.5 26.7 263 36-312 19-345 (389)
360 3uc1_A DNA gyrase subunit A; D 79.7 22 0.00074 28.4 23.9 162 58-224 92-279 (327)
361 4gq2_M Nucleoporin NUP120; bet 78.2 45 0.0015 31.2 20.0 37 108-145 237-273 (950)
362 3a0f_A Xyloglucanase; beta-pro 75.8 46 0.0016 30.1 29.2 155 59-215 19-203 (763)
363 4hvt_A Ritya.17583.B, post-pro 70.8 60 0.002 29.2 26.1 240 63-311 131-429 (711)
364 4fhn_B Nucleoporin NUP120; pro 70.2 16 0.00054 34.9 8.3 38 108-146 239-276 (1139)
365 3q6k_A 43.2 kDa salivary prote 63.9 59 0.002 26.5 22.7 136 130-268 124-306 (381)
366 3zwu_A Alkaline phosphatase PH 62.5 80 0.0027 27.6 13.6 58 195-254 478-548 (592)
367 4gq2_M Nucleoporin NUP120; bet 54.4 1.4E+02 0.0048 27.9 22.4 37 151-188 237-273 (950)
368 3f7f_A Nucleoporin NUP120; nuc 51.4 27 0.00094 31.2 5.8 37 108-147 223-259 (729)
369 4a9v_A PHOX; hydrolase, beta-p 51.1 1.2E+02 0.004 26.5 9.4 60 107-168 476-548 (592)
370 3no0_A DNA gyrase subunit A; D 50.7 83 0.0028 24.2 22.8 161 57-224 64-246 (276)
371 3zwu_A Alkaline phosphatase PH 49.4 55 0.0019 28.6 7.3 65 10-78 478-548 (592)
372 3a0f_A Xyloglucanase; beta-pro 48.1 1.6E+02 0.0054 26.7 28.6 157 6-172 19-203 (763)
373 3f7f_A Nucleoporin NUP120; nuc 46.6 32 0.0011 30.8 5.5 35 152-189 224-258 (729)
374 1suu_A DNA gyrase subunit A; t 46.4 1.1E+02 0.0036 24.1 24.4 120 58-181 97-231 (312)
375 3q6k_A 43.2 kDa salivary prote 45.4 1.2E+02 0.0042 24.7 20.9 164 84-249 124-336 (381)
376 3mvd_K Regulator of chromosome 44.1 1.3E+02 0.0045 24.6 35.7 261 35-312 41-374 (423)
377 4a9v_A PHOX; hydrolase, beta-p 41.5 1.8E+02 0.0061 25.4 14.7 64 194-259 477-553 (592)
378 3kci_A Probable E3 ubiquitin-p 40.7 1.4E+02 0.0049 24.1 23.5 226 75-311 12-292 (389)
379 1xks_A Nuclear pore complex pr 39.7 1.7E+02 0.0057 24.6 17.1 60 75-137 111-171 (450)
380 1q47_A Semaphorin 3A; beta pro 39.4 1.8E+02 0.0061 24.8 9.0 34 53-87 454-487 (495)
381 3uc1_A DNA gyrase subunit A; D 38.8 1.5E+02 0.005 23.6 22.1 166 4-181 91-279 (327)
382 3no0_A DNA gyrase subunit A; D 36.7 1.4E+02 0.0049 22.9 21.6 197 107-312 24-246 (276)
383 1wp5_A Topoisomerase IV; broke 34.0 1.7E+02 0.0059 23.1 25.5 236 70-312 3-277 (323)
384 3al9_A Plexin-A2; beta-propell 32.6 1.8E+02 0.0062 25.0 7.9 72 9-87 401-476 (539)
385 1q47_A Semaphorin 3A; beta pro 30.9 2.2E+02 0.0075 24.2 8.0 59 74-133 422-487 (495)
386 3kvp_A Uncharacterized protein 30.0 63 0.0022 18.6 3.1 21 36-56 37-57 (72)
387 1ukf_A Avirulence protein AVRP 29.1 72 0.0025 22.8 4.0 35 236-270 118-152 (188)
388 4hvt_A Ritya.17583.B, post-pro 28.3 3.3E+02 0.011 24.5 26.9 245 12-267 133-429 (711)
389 1olz_A Semaphorin 4D; developm 25.7 2.1E+02 0.0073 25.4 7.3 56 251-307 417-477 (663)
390 3al9_A Plexin-A2; beta-propell 25.3 2.7E+02 0.0091 24.0 7.7 68 239-307 402-476 (539)
391 3oky_B Putative uncharacterize 25.1 3.4E+02 0.012 23.6 9.8 69 238-307 404-495 (565)
392 4d9s_A UVB-resistance protein 24.7 2.8E+02 0.0097 22.5 33.3 261 35-312 33-357 (406)
393 4gz8_A Semaphorin-3A; multi-do 24.5 3.1E+02 0.01 24.5 8.0 59 74-133 430-495 (667)
394 1olz_A Semaphorin 4D; developm 24.3 2.1E+02 0.0073 25.4 7.0 52 36-87 424-477 (663)
395 3ol2_B Plexin-B1; beta-propell 22.8 3E+02 0.01 23.6 7.4 58 75-133 402-461 (528)
396 1ukf_A Avirulence protein AVRP 22.5 70 0.0024 22.9 2.9 36 106-141 118-153 (188)
397 3v4v_A Integrin alpha-4; cell 21.2 4.2E+02 0.014 23.2 10.9 120 11-136 169-311 (597)
398 4fhn_B Nucleoporin NUP120; pro 21.0 5.6E+02 0.019 24.6 17.5 32 195-227 240-271 (1139)
No 1
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=4.5e-53 Score=347.36 Aligned_cols=301 Identities=21% Similarity=0.289 Sum_probs=245.7
Q ss_pred cCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCC-cceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCe
Q 021121 6 TPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAP-ALTELVAFDTADGVYDLAWSESHDSLLIAAVADGS 84 (317)
Q Consensus 6 ~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 84 (317)
+...|.+++|+| ++.++++++....-.+++.+.+|+...... .........+...|.+++|+|++ .|++|+.||+
T Consensus 29 ~~~~v~~~~fs~--dG~~l~~~sd~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~--~l~~~s~dg~ 104 (344)
T 4gqb_B 29 MERQLEAARYRS--DGALLLGASSLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER--GILVASDSGA 104 (344)
T ss_dssp CCSEEEEEEECT--TSCEEEEEECCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT--EEEEEETTSE
T ss_pred ccCCEEEEEECC--CCCEEEEEeCCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC--eEEEEECCCE
Confidence 456799999999 678888777332222344444444322221 11223334567889999999984 7889999999
Q ss_pred EEEEEeCCCCCCCCc-eeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeeccccceEEEEEecCCCC
Q 021121 85 VKIYDTALPPTANPI-RSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSD 163 (317)
Q Consensus 85 i~v~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 163 (317)
|++||+.+++..... ....+|...|++++|+|+++ +|++|+.|+.|++||+++++.+..+.+|...|.+++|+|++..
T Consensus 105 v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~-~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~ 183 (344)
T 4gqb_B 105 VELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGT-QAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDS 183 (344)
T ss_dssp EEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTT
T ss_pred EEEEeccCCCceeEeeccccCCCCCEEEEEECCCCC-EEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCC
Confidence 999999876322211 23458999999999999998 9999999999999999999999999999999999999999667
Q ss_pred eEEEEeCCCeEEEEeCCCCCceeeec--cCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEecCCCceeE
Q 021121 164 VFCSASGDCTLRIWDVREMGSTMIIP--AHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRK 241 (317)
Q Consensus 164 ~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~v~~ 241 (317)
++++++.|+.|++||+++++....+. .+...+.+++|+|.+++++++|+.|+.|++||+++.+ ++..+.+|...|++
T Consensus 184 ~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~-~~~~~~~h~~~v~~ 262 (344)
T 4gqb_B 184 VFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTS-CVLSSAVHSQCVTG 262 (344)
T ss_dssp EEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC---CCEEEECCSSCEEE
T ss_pred ceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCc-EEEEEcCCCCCEEE
Confidence 89999999999999999998887764 3455789999999778899999999999999999876 47888999999999
Q ss_pred EEecCCCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEeecCCcEEEEecCCCC
Q 021121 242 VKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGMDP 314 (317)
Q Consensus 242 ~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~ 314 (317)
++|+|++..+|++|+.|++|+|||+++++ + ..+.+|.+.|++++|+|++..+|+++|.||+|++|++..++
T Consensus 263 v~fsp~g~~~lasgs~D~~i~vwd~~~~~-~-~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 263 LVFSPHSVPFLASLSEDCSLAVLDSSLSE-L-FRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp EEECSSSSCCEEEEETTSCEEEECTTCCE-E-EEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred EEEccCCCeEEEEEeCCCeEEEEECCCCc-E-EEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 99999986689999999999999998876 3 45789999999999999966688899999999999998764
No 2
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.5e-52 Score=346.72 Aligned_cols=301 Identities=20% Similarity=0.284 Sum_probs=247.5
Q ss_pred cCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcce-eeeeecCCCCeeEEEecCCCCCeEEEEEcCCe
Q 021121 6 TPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALT-ELVAFDTADGVYDLAWSESHDSLLIAAVADGS 84 (317)
Q Consensus 6 ~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 84 (317)
|...|.+++||| ++.++++++.+....+||.|++|+.....+... .....+|...|.+++|+|++ .+++++.||.
T Consensus 41 H~~~V~~v~fSp--DG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~--~~l~~s~dg~ 116 (357)
T 4g56_B 41 MEVQIGAVRYRR--DGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEK--GILVASDSGA 116 (357)
T ss_dssp CCSEEEEEEECS--SSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTT--EEEEEETTSC
T ss_pred ccCCEEEEEECC--CCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCC--CEEEEECCCE
Confidence 678899999999 688888887654455688999999876653222 23344788899999999986 5667889999
Q ss_pred EEEEEeCCCCCCCC-ceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeeccccceEEEEEecCCCC
Q 021121 85 VKIYDTALPPTANP-IRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSD 163 (317)
Q Consensus 85 i~v~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 163 (317)
|++||+..++.... .....+|...|.+++|+|+++ +|++++.||.|++||+++++.+..+..|...|++++|+|++..
T Consensus 117 v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~-~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~ 195 (357)
T 4g56_B 117 VELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGT-QAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDT 195 (357)
T ss_dssp EEEC--------CCCCEEECCCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSS
T ss_pred EEEeeccccceeEEEeeccCCCCCCEEEEEECCCCC-EEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCc
Confidence 99999987632222 223457999999999999998 9999999999999999999999999999999999999999667
Q ss_pred eEEEEeCCCeEEEEeCCCCCceeeec--cCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEecCCCceeE
Q 021121 164 VFCSASGDCTLRIWDVREMGSTMIIP--AHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRK 241 (317)
Q Consensus 164 ~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~v~~ 241 (317)
++++++.||.|++||+++++....+. .+...+.+++|+|..+.+|++|+.|+.|++||+++++ ++..+.+|...|++
T Consensus 196 ~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~-~~~~~~~~~~~v~~ 274 (357)
T 4g56_B 196 IFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPD-SAQTSAVHSQNITG 274 (357)
T ss_dssp CEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGG-GCEEECCCSSCEEE
T ss_pred eeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCc-EeEEEeccceeEEE
Confidence 89999999999999999987766543 4667799999999667899999999999999999876 47888899999999
Q ss_pred EEecCCCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEeecCCcEEEEecCCCC
Q 021121 242 VKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGMDP 314 (317)
Q Consensus 242 ~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~ 314 (317)
++|+|++..+|++|+.|++|+|||+++++ ++ ...+|...|++++|+|.++.+|++++.||.|++|++..+.
T Consensus 275 l~~sp~~~~~lasgs~D~~i~iwd~~~~~-~~-~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~ 345 (357)
T 4g56_B 275 LAYSYHSSPFLASISEDCTVAVLDADFSE-VF-RDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEG 345 (357)
T ss_dssp EEECSSSSCCEEEEETTSCEEEECTTSCE-EE-EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC---
T ss_pred EEEcCCCCCEEEEEeCCCEEEEEECCCCc-Ee-EECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCC
Confidence 99999987689999999999999999876 33 3457999999999999547899999999999999997653
No 3
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=5.2e-52 Score=349.81 Aligned_cols=285 Identities=26% Similarity=0.396 Sum_probs=256.6
Q ss_pred cCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeE
Q 021121 6 TPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSV 85 (317)
Q Consensus 6 ~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 85 (317)
|..+|++++|+| ++.++++++. ||.|++||+..... .. ....|...|.+++|+|++ .+|++|+.|++|
T Consensus 107 h~~~V~~~~~~p--~~~~l~s~s~------Dg~i~vwd~~~~~~-~~--~l~~h~~~V~~v~~~~~~-~~l~sgs~D~~i 174 (410)
T 1vyh_C 107 HRSPVTRVIFHP--VFSVMVSASE------DATIKVWDYETGDF-ER--TLKGHTDSVQDISFDHSG-KLLASCSADMTI 174 (410)
T ss_dssp CSSCEEEEEECS--SSSEEEEEES------SSCEEEEETTTCCC-CE--EECCCSSCEEEEEECTTS-SEEEEEETTSCC
T ss_pred cCCcEEEEEEcC--CCCEEEEEeC------CCeEEEEECCCCcE-EE--EEeccCCcEEEEEEcCCC-CEEEEEeCCCeE
Confidence 778999999999 5667777765 99999999987652 22 223688999999999998 699999999999
Q ss_pred EEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeeccccceEEEEEecCCCCeE
Q 021121 86 KIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVF 165 (317)
Q Consensus 86 ~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 165 (317)
++||+... +.+..+.+|...|.+++|+|++. ++++|+.|+.|++||++++.++..+.+|...|.++.++|+ +.++
T Consensus 175 ~iwd~~~~---~~~~~~~~h~~~V~~v~~~p~~~-~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~-g~~l 249 (410)
T 1vyh_C 175 KLWDFQGF---ECIRTMHGHDHNVSSVSIMPNGD-HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD-GTLI 249 (410)
T ss_dssp CEEETTSS---CEEECCCCCSSCEEEEEECSSSS-EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTT-SSEE
T ss_pred EEEeCCCC---ceeEEEcCCCCCEEEEEEeCCCC-EEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCC-CCEE
Confidence 99999765 67778889999999999999988 9999999999999999999999999999999999999998 8999
Q ss_pred EEEeCCCeEEEEeCCCCCceeeeccCccceEEEEecCCC-------------------CcEEEEEecCCcEEEEEccCCC
Q 021121 166 CSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYD-------------------DCLIASASVDKSIKIWDVRNYR 226 (317)
Q Consensus 166 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~-------------------~~~l~~~~~d~~i~v~d~~~~~ 226 (317)
++++.|+.|++||+++++....+..|...|.+++|+|.. +.++++|+.|+.|++||++++.
T Consensus 250 ~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~ 329 (410)
T 1vyh_C 250 ASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM 329 (410)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTE
T ss_pred EEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCc
Confidence 999999999999999999999999999999999999831 5689999999999999999866
Q ss_pred ccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEeecCCcEE
Q 021121 227 VPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVY 306 (317)
Q Consensus 227 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~ 306 (317)
++..+.+|...|++++|+|+++ +|++++.|+.|++||+.+++ .+..+.+|...|++++|+|+ +.+|++|+.||.|+
T Consensus 330 -~~~~~~~h~~~v~~v~~~~~g~-~l~s~s~D~~i~vwd~~~~~-~~~~~~~h~~~v~~l~~~~~-~~~l~sgs~D~~i~ 405 (410)
T 1vyh_C 330 -CLMTLVGHDNWVRGVLFHSGGK-FILSCADDKTLRVWDYKNKR-CMKTLNAHEHFVTSLDFHKT-APYVVTGSVDQTVK 405 (410)
T ss_dssp -EEEEEECCSSCEEEEEECSSSS-CEEEEETTTEEEEECCTTSC-CCEEEECCSSCEEEEEECSS-SSCEEEEETTSEEE
T ss_pred -eEEEEECCCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCc-eEEEEcCCCCcEEEEEEcCC-CCEEEEEeCCCcEE
Confidence 4788889999999999999998 69999999999999998876 56788999999999999998 78999999999999
Q ss_pred EEecC
Q 021121 307 VWQQG 311 (317)
Q Consensus 307 ~w~~~ 311 (317)
+|+++
T Consensus 406 vW~~r 410 (410)
T 1vyh_C 406 VWECR 410 (410)
T ss_dssp EEC--
T ss_pred EEeCC
Confidence 99863
No 4
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=7.7e-52 Score=337.52 Aligned_cols=289 Identities=19% Similarity=0.253 Sum_probs=256.5
Q ss_pred ecCcceeEEEEecCC--CCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcC
Q 021121 5 KTPFNGYSVKFSPFY--ESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVAD 82 (317)
Q Consensus 5 ~~~~~v~~~~~~p~~--~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 82 (317)
.|...|++++|+|+. ++.++++++. |+.|++|++..... .......+|...|.+++|+|++ .++++++.|
T Consensus 30 ~H~~~V~~v~~~~~~~~~~~~l~tgs~------D~~v~vW~~~~~~~-~~~~~l~gh~~~v~~~~~~~~~-~~l~s~s~D 101 (321)
T 3ow8_A 30 AHDDAIWSVAWGTNKKENSETVVTGSL------DDLVKVWKWRDERL-DLQWSLEGHQLGVVSVDISHTL-PIAASSSLD 101 (321)
T ss_dssp SSSSCEEEEEEC-------CEEEEEET------TSCEEEEEEETTEE-EEEEEECCCSSCEEEEEECSSS-SEEEEEETT
T ss_pred cCCCcEEEEEEecCCCCCCCEEEEEcC------CCCEEEEECCCCCe-eeeeeeccCCCCEEEEEECCCC-CEEEEEeCC
Confidence 488999999999842 3456666665 99999999976541 1122234789999999999998 599999999
Q ss_pred CeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeeccccceEEEEEecCCC
Q 021121 83 GSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHS 162 (317)
Q Consensus 83 g~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 162 (317)
+.|++||+..+ +.+..+..|...+.+++|+|+++ +|++++.||.|++||+++++....+..+...+.+++|+|+ +
T Consensus 102 ~~i~lWd~~~~---~~~~~~~~~~~~~~~~~~spdg~-~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spd-g 176 (321)
T 3ow8_A 102 AHIRLWDLENG---KQIKSIDAGPVDAWTLAFSPDSQ-YLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPD-G 176 (321)
T ss_dssp SEEEEEETTTT---EEEEEEECCTTCCCCEEECTTSS-EEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTT-S
T ss_pred CcEEEEECCCC---CEEEEEeCCCccEEEEEECCCCC-EEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCC-C
Confidence 99999999876 67777888899999999999998 9999999999999999999999999989999999999999 8
Q ss_pred CeEEEEeCCCeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEecCCCceeEE
Q 021121 163 DVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKV 242 (317)
Q Consensus 163 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~v~~~ 242 (317)
++|++++.||.|++||+++++.+..+.+|..+|.+++|+| ++++|++++.|+.|++||+++.+ ....+.+|...|.++
T Consensus 177 ~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp-d~~~l~s~s~dg~i~iwd~~~~~-~~~~~~~h~~~v~~~ 254 (321)
T 3ow8_A 177 KYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYDVQHAN-LAGTLSGHASWVLNV 254 (321)
T ss_dssp SEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECT-TSCEEEEECTTSCEEEEETTTCC-EEEEECCCSSCEEEE
T ss_pred CEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcC-CCCEEEEEcCCCeEEEEECCCcc-eeEEEcCCCCceEEE
Confidence 9999999999999999999999999999999999999999 99999999999999999999866 477889999999999
Q ss_pred EecCCCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEeecCCcEEEEecC
Q 021121 243 KFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQG 311 (317)
Q Consensus 243 ~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~ 311 (317)
+|+|+++ +|++++.|+.|++||+.+++ ++..+.+|...|.+++|+|+ +.+|++++.||.|++||..
T Consensus 255 ~~sp~~~-~l~s~s~D~~v~iwd~~~~~-~~~~~~~h~~~v~~v~~s~~-g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 255 AFCPDDT-HFVSSSSDKSVKVWDVGTRT-CVHTFFDHQDQVWGVKYNGN-GSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EECTTSS-EEEEEETTSCEEEEETTTTE-EEEEECCCSSCEEEEEECTT-SSEEEEEETTCCEEEEECC
T ss_pred EECCCCC-EEEEEeCCCcEEEEeCCCCE-EEEEEcCCCCcEEEEEECCC-CCEEEEEeCCCeEEEEeCC
Confidence 9999998 79999999999999999876 66788899999999999998 7899999999999999974
No 5
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.3e-49 Score=327.30 Aligned_cols=284 Identities=22% Similarity=0.331 Sum_probs=249.4
Q ss_pred cCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeE
Q 021121 6 TPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSV 85 (317)
Q Consensus 6 ~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 85 (317)
|...|++++|+| ++.++++++. ||.|++||+..... . .....|...|.+++|+|++ .+|++|+.|+.|
T Consensus 54 H~~~v~~~~~s~--d~~~l~s~s~------Dg~v~iWd~~~~~~-~--~~~~~~~~~v~~~~~s~~~-~~l~s~~~d~~v 121 (340)
T 1got_B 54 HLAKIYAMHWGT--DSRLLLSASQ------DGKLIIWDSYTTNK-V--HAIPLRSSWVMTCAYAPSG-NYVACGGLDNIC 121 (340)
T ss_dssp CSSCEEEEEECT--TSSEEEEEET------TTEEEEEETTTCCE-E--EEEECSSSCEEEEEECTTS-SEEEEEETTCEE
T ss_pred CCCceEEEEECC--CCCEEEEEeC------CCcEEEEECCCCCc-c--eEeecCCccEEEEEECCCC-CEEEEEeCCCeE
Confidence 778999999999 6777777776 99999999987652 2 2223578889999999998 699999999999
Q ss_pred EEEEeCCCCC-CCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeeccccceEEEEEecCCCCe
Q 021121 86 KIYDTALPPT-ANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDV 164 (317)
Q Consensus 86 ~v~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 164 (317)
++|++..... ......+.+|...|.++.|++++ .+++++.|+.|++||+++++.+..+.+|...|.+++|+|+ +.+
T Consensus 122 ~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~-~~~ 198 (340)
T 1got_B 122 SIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDN--QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPD-TRL 198 (340)
T ss_dssp EEEETTTCSBSCEEEEEEECCSSCEEEEEEEETT--EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTT-SSE
T ss_pred EEEECccCCCcceeEEEecCCCccEEEEEECCCC--cEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCC-CCE
Confidence 9999976421 23445677899999999999886 5899999999999999999999999999999999999998 889
Q ss_pred EEEEeCCCeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEe--cCCCceeEE
Q 021121 165 FCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLN--GHGYAVRKV 242 (317)
Q Consensus 165 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~--~~~~~v~~~ 242 (317)
+++++.|+.|++||+++++....+.+|...|.+++|+| ++++|++++.|+.|++||+++.+. +..+. .+...|+++
T Consensus 199 l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p-~~~~l~s~s~d~~v~iwd~~~~~~-~~~~~~~~~~~~v~~~ 276 (340)
T 1got_B 199 FVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFP-NGNAFATGSDDATCRLFDLRADQE-LMTYSHDNIICGITSV 276 (340)
T ss_dssp EEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEE-EEEECCTTCCSCEEEE
T ss_pred EEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcC-CCCEEEEEcCCCcEEEEECCCCcE-EEEEccCCcccceEEE
Confidence 99999999999999999999999999999999999999 999999999999999999998653 44443 233579999
Q ss_pred EecCCCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEeecCCcEEEEe
Q 021121 243 KFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQ 309 (317)
Q Consensus 243 ~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~ 309 (317)
+|+|+++ +|++|+.|+.|++||+.+.+ ....+.+|...|.+++|+|+ +.+|++|+.||.|++||
T Consensus 277 ~~s~~g~-~l~~g~~d~~i~vwd~~~~~-~~~~~~~h~~~v~~~~~s~d-g~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 277 SFSKSGR-LLLAGYDDFNCNVWDALKAD-RAGVLAGHDNRVSCLGVTDD-GMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EECTTSS-EEEEEETTSEEEEEETTTCC-EEEEEECCSSCEEEEEECTT-SSCEEEEETTSCEEEEC
T ss_pred EECCCCC-EEEEECCCCeEEEEEcccCc-EeeEeecCCCcEEEEEEcCC-CCEEEEEcCCccEEecC
Confidence 9999998 79999999999999998876 56788999999999999998 88999999999999997
No 6
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.8e-50 Score=331.80 Aligned_cols=296 Identities=21% Similarity=0.295 Sum_probs=244.3
Q ss_pred cCc-ceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCe
Q 021121 6 TPF-NGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGS 84 (317)
Q Consensus 6 ~~~-~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 84 (317)
|.. .|.+++|+| ++.++++++. ||.|+|||+.............+|...|.+++|+|++ .+|++|+.|+.
T Consensus 14 h~~~~v~~l~~sp--~g~~las~~~------D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g-~~l~s~s~D~~ 84 (345)
T 3fm0_A 14 HPDSRCWFLAWNP--AGTLLASCGG------DRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCG-NYLASASFDAT 84 (345)
T ss_dssp STTSCEEEEEECT--TSSCEEEEET------TSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTS-SEEEEEETTSC
T ss_pred CCCCcEEEEEECC--CCCEEEEEcC------CCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCC-CEEEEEECCCc
Confidence 555 899999999 5777777775 9999999998664222222234688999999999998 69999999999
Q ss_pred EEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCc---eeEEeeccccceEEEEEecCC
Q 021121 85 VKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPT---SVRTFKEHAYCVYNATWNPRH 161 (317)
Q Consensus 85 i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~---~~~~~~~~~~~v~~~~~~~~~ 161 (317)
|++|++... ....+..+.+|...|.+++|+|+++ +|++++.|+.|++||++++. .+..+..|...|.+++|+|+
T Consensus 85 v~iw~~~~~-~~~~~~~~~~h~~~v~~v~~sp~~~-~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~- 161 (345)
T 3fm0_A 85 TCIWKKNQD-DFECVTTLEGHENEVKSVAWAPSGN-LLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPS- 161 (345)
T ss_dssp EEEEEECCC--EEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSS-
T ss_pred EEEEEccCC-CeEEEEEccCCCCCceEEEEeCCCC-EEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCC-
Confidence 999998754 2345667889999999999999998 99999999999999998764 45667789999999999999
Q ss_pred CCeEEEEeCCCeEEEEeCCCCC--ceeeeccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCc------------
Q 021121 162 SDVFCSASGDCTLRIWDVREMG--STMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRV------------ 227 (317)
Q Consensus 162 ~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~------------ 227 (317)
+.+|++++.|+.|++||.++++ ....+.+|...|.+++|+| ++++|++++.|+.|++||......
T Consensus 162 ~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp-~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~ 240 (345)
T 3fm0_A 162 QELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDP-SGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPS 240 (345)
T ss_dssp SSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CE
T ss_pred CCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECC-CCCEEEEEeCCCeEEEeccccCCCCccceeeccCCc
Confidence 8899999999999999998775 3467788999999999999 999999999999999999754321
Q ss_pred --cEEEEec-CCCceeEEEecCCCCeeEEeeecCCeEEEEecccccc--------eeeeeecccceeEeEEEEeccCCeE
Q 021121 228 --PIAVLNG-HGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDA--------LVGRYDHHTEFAVGVDMSVLVEGLL 296 (317)
Q Consensus 228 --~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~--------~~~~~~~~~~~v~~~~~~~~~~~~l 296 (317)
++..+.+ |...|.+++|+|++. +|++++.|+.|++|+...... ......+|...|++++|+|+++.+|
T Consensus 241 ~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l 319 (345)
T 3fm0_A 241 WKCICTLSGFHSRTIYDIAWCQLTG-ALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLL 319 (345)
T ss_dssp EEEEEEECSSCSSCEEEEEECTTTC-CEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEE
T ss_pred cceeEEecCCCCCcEEEEEEecCCC-EEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEE
Confidence 1223333 888999999999998 699999999999999876431 1123357899999999999855699
Q ss_pred EEeecCCcEEEEecCCCCC
Q 021121 297 ASTGWDELVYVWQQGMDPR 315 (317)
Q Consensus 297 ~s~~~dg~i~~w~~~~~~~ 315 (317)
++|+.||.|++|++...++
T Consensus 320 aS~s~Dg~v~~W~~~~~~~ 338 (345)
T 3fm0_A 320 ASCSDDGEVAFWKYQRPEG 338 (345)
T ss_dssp EEEETTSCEEEEEECC---
T ss_pred EEcCCCCcEEEEEecCCCC
Confidence 9999999999999987654
No 7
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=3e-49 Score=320.16 Aligned_cols=288 Identities=21% Similarity=0.282 Sum_probs=246.2
Q ss_pred cCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeE
Q 021121 6 TPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSV 85 (317)
Q Consensus 6 ~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 85 (317)
|...|++++|+| ++.++++++. ||.|++||+..... . .....|..+|.+++|+|++ ++|++|+.|+.|
T Consensus 12 h~~~V~~~~fsp--~~~~l~s~~~------dg~v~lWd~~~~~~-~--~~~~~~~~~v~~~~~~~~~-~~l~s~s~d~~i 79 (304)
T 2ynn_A 12 RSDRVKGIDFHP--TEPWVLTTLY------SGRVELWNYETQVE-V--RSIQVTETPVRAGKFIARK-NWIIVGSDDFRI 79 (304)
T ss_dssp ECSCEEEEEECS--SSSEEEEEET------TSEEEEEETTTTEE-E--EEEECCSSCEEEEEEEGGG-TEEEEEETTSEE
T ss_pred CCCceEEEEECC--CCCEEEEEcC------CCcEEEEECCCCce-e--EEeeccCCcEEEEEEeCCC-CEEEEECCCCEE
Confidence 778999999999 5666777665 99999999987541 1 2223578899999999998 699999999999
Q ss_pred EEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCC-ceeEEeeccccceEEEEEecCCCCe
Q 021121 86 KIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRP-TSVRTFKEHAYCVYNATWNPRHSDV 164 (317)
Q Consensus 86 ~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~ 164 (317)
++||+.++ +.+..+.+|...|.+++|+|+++ ++++|+.||.|++||++++ .....+.+|...|.+++|+|.++.+
T Consensus 80 ~vwd~~~~---~~~~~~~~h~~~v~~~~~~~~~~-~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~ 155 (304)
T 2ynn_A 80 RVFNYNTG---EKVVDFEAHPDYIRSIAVHPTKP-YVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPST 155 (304)
T ss_dssp EEEETTTC---CEEEEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTE
T ss_pred EEEECCCC---cEEEEEeCCCCcEEEEEEcCCCC-EEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCE
Confidence 99999876 67788899999999999999998 9999999999999999887 4456788899999999999966899
Q ss_pred EEEEeCCCeEEEEeCCCCCceeeec-cCccceEEEEecCC-CCcEEEEEecCCcEEEEEccCCCccEEEEecCCCceeEE
Q 021121 165 FCSASGDCTLRIWDVREMGSTMIIP-AHEFEILACDWNKY-DDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKV 242 (317)
Q Consensus 165 l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~v~~i~~~~~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~v~~~ 242 (317)
+++|+.|+.|++||+++......+. .+...+..+.|+|. ++.+|++++.|+.|++||+++.+ ++..+.+|...|.++
T Consensus 156 l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~-~~~~~~~h~~~v~~~ 234 (304)
T 2ynn_A 156 FASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKS-CVATLEGHMSNVSFA 234 (304)
T ss_dssp EEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTE-EEEEEECCSSCEEEE
T ss_pred EEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCc-cceeeCCCCCCEEEE
Confidence 9999999999999998877666554 45678899999873 56799999999999999999865 588899999999999
Q ss_pred EecCCCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEEeccCC-eEEEeecCCcEEEEecCCC
Q 021121 243 KFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEG-LLASTGWDELVYVWQQGMD 313 (317)
Q Consensus 243 ~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~s~~~dg~i~~w~~~~~ 313 (317)
+|+|+++ +|++|+.||.|++||+.+.+ +...+..|...+.+++|+|+++. ++++|+.|| +.+|++..+
T Consensus 235 ~~~p~~~-~l~s~s~Dg~i~iWd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g-~~~~~~~~~ 303 (304)
T 2ynn_A 235 VFHPTLP-IIISGSEDGTLKIWNSSTYK-VEKTLNVGLERSWCIATHPTGRKNYIASGFDNG-FTVLSLGND 303 (304)
T ss_dssp EECSSSS-EEEEEETTSCEEEEETTTCC-EEEEECCSSSSEEEEEECTTCGGGCEEEEETTE-EEEEECC--
T ss_pred EECCCCC-EEEEEcCCCeEEEEECCCCc-eeeeccCCCccEEEEEECCCCCceEEEEecCCc-eEEEEeccC
Confidence 9999998 79999999999999999876 66788889899999999998544 477776555 778888654
No 8
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=9.7e-49 Score=323.60 Aligned_cols=286 Identities=22% Similarity=0.315 Sum_probs=249.5
Q ss_pred cCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeE
Q 021121 6 TPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSV 85 (317)
Q Consensus 6 ~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 85 (317)
|...|++++|+| ++.++++++. ||.|++||...... ......+...|.+++|+|++ .++++|+.|+.+
T Consensus 63 H~~~V~~~~~s~--d~~~l~s~s~------Dg~v~vWd~~~~~~---~~~~~~~~~~v~~~~~sp~g-~~lasg~~d~~i 130 (354)
T 2pbi_B 63 HGNKVLCMDWCK--DKRRIVSSSQ------DGKVIVWDSFTTNK---EHAVTMPCTWVMACAYAPSG-CAIACGGLDNKC 130 (354)
T ss_dssp CSSCEEEEEECT--TSSEEEEEET------TSEEEEEETTTCCE---EEEEECSSSCCCEEEECTTS-SEEEEESTTSEE
T ss_pred CCCeEEEEEECC--CCCEEEEEeC------CCeEEEEECCCCCc---ceEEecCCCCEEEEEECCCC-CEEEEeeCCCCE
Confidence 788999999999 5677777776 99999999876642 12223577789999999998 699999999999
Q ss_pred EEEEeCCCCC---CCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeeccccceEEEEEecC-C
Q 021121 86 KIYDTALPPT---ANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPR-H 161 (317)
Q Consensus 86 ~v~~~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~-~ 161 (317)
++|++..... ......+..|...|.+++|+|++. .|++++.|++|++||+++++.+..+.+|...|.+++|+|. +
T Consensus 131 ~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~ 209 (354)
T 2pbi_B 131 SVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDM-QILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSET 209 (354)
T ss_dssp EEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSS-EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSS
T ss_pred EEEEEeccccccccccceeeeccCCcEEEEEEeCCCC-EEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCC
Confidence 9999875421 234456678999999999999987 8999999999999999999999999999999999999985 2
Q ss_pred CCeEEEEeCCCeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEec--CCCce
Q 021121 162 SDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNG--HGYAV 239 (317)
Q Consensus 162 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~--~~~~v 239 (317)
+++|++|+.||.|++||+++++.+..+..|...|.+++|+| ++++|++++.|+.|++||++..+. +..+.. +...+
T Consensus 210 g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p-~~~~l~s~s~D~~v~lwd~~~~~~-~~~~~~~~~~~~~ 287 (354)
T 2pbi_B 210 GNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYP-SGDAFASGSDDATCRLYDLRADRE-VAIYSKESIIFGA 287 (354)
T ss_dssp CCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEE-EEEECCTTCCSCE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeC-CCCEEEEEeCCCeEEEEECCCCcE-EEEEcCCCcccce
Confidence 58999999999999999999999999999999999999999 999999999999999999998653 444443 33478
Q ss_pred eEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEeecCCcEEEEe
Q 021121 240 RKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQ 309 (317)
Q Consensus 240 ~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~ 309 (317)
.+++|+|+++ +|++|+.|+.|++||+.+++ .+..+.+|...|.+++|+|+ +.+|++|+.||.|++|+
T Consensus 288 ~~~~~s~~g~-~l~~g~~d~~i~vwd~~~~~-~~~~l~~h~~~v~~l~~spd-g~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 288 SSVDFSLSGR-LLFAGYNDYTINVWDVLKGS-RVSILFGHENRVSTLRVSPD-GTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEEECTTSS-EEEEEETTSCEEEEETTTCS-EEEEECCCSSCEEEEEECTT-SSCEEEEETTSEEEEEC
T ss_pred eEEEEeCCCC-EEEEEECCCcEEEEECCCCc-eEEEEECCCCcEEEEEECCC-CCEEEEEcCCCCEEecC
Confidence 9999999998 79999999999999998876 56778899999999999999 88999999999999996
No 9
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=7.7e-50 Score=333.48 Aligned_cols=294 Identities=22% Similarity=0.323 Sum_probs=250.3
Q ss_pred cCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeE
Q 021121 6 TPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSV 85 (317)
Q Consensus 6 ~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 85 (317)
|...|++++|+| ++.++++++. ||.|++||+..... ......|...|.+++|+|++ .+|++|+.|+.+
T Consensus 65 H~~~V~~~~~sp--~~~~l~s~s~------D~~v~iWd~~~~~~---~~~~~~h~~~v~~~~~s~~g-~~las~~~d~~v 132 (380)
T 3iz6_a 65 HSGKVYSLDWTP--EKNWIVSASQ------DGRLIVWNALTSQK---THAIKLHCPWVMECAFAPNG-QSVACGGLDSAC 132 (380)
T ss_dssp CSSCEEEEEECT--TSSCEEEEET------TSEEEEEETTTTEE---EEEEECCCTTCCCCEECTTS-SEEEECCSSSCC
T ss_pred cccEEEEEEEcC--CCCEEEEEeC------CCeEEEEECCCCcc---ceEEecCCCCEEEEEECCCC-CEEEEeeCCCcE
Confidence 788999999999 5667777775 99999999977642 22233688899999999998 699999999999
Q ss_pred EEEEeCCCC----CCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEe-----eccccceEEEE
Q 021121 86 KIYDTALPP----TANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTF-----KEHAYCVYNAT 156 (317)
Q Consensus 86 ~v~~~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~-----~~~~~~v~~~~ 156 (317)
++|++.... .......+.+|.+.|.++.|.|++...|++|+.|+.|++||+++++.+..+ .+|...|.+++
T Consensus 133 ~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~ 212 (380)
T 3iz6_a 133 SIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLS 212 (380)
T ss_dssp EEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEE
T ss_pred EEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEE
Confidence 999987532 223445678999999999999987668999999999999999999988877 56888999999
Q ss_pred EecCCCCeEEEEeCCCeEEEEeCC-CCCceeeeccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEecC
Q 021121 157 WNPRHSDVFCSASGDCTLRIWDVR-EMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGH 235 (317)
Q Consensus 157 ~~~~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~ 235 (317)
|+|.+++++++|+.|+.|++||++ ..+.+..+.+|...|.+++|+| ++++|++++.|++|++||+++++. +..+..+
T Consensus 213 ~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p-~~~~l~s~s~D~~i~lwd~~~~~~-~~~~~~~ 290 (380)
T 3iz6_a 213 INSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFP-DGQRFGTGSDDGTCRLFDMRTGHQ-LQVYNRE 290 (380)
T ss_dssp ECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECT-TSSEEEEECSSSCEEEEETTTTEE-EEEECCC
T ss_pred eecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEec-CCCeEEEEcCCCeEEEEECCCCcE-EEEeccc
Confidence 998658999999999999999998 4577788889999999999999 999999999999999999998764 5554433
Q ss_pred C-------CceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeee----ecccceeEeEEEEeccCCeEEEeecCCc
Q 021121 236 G-------YAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRY----DHHTEFAVGVDMSVLVEGLLASTGWDEL 304 (317)
Q Consensus 236 ~-------~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~l~s~~~dg~ 304 (317)
. ..|++++|+|+++ +|++|+.||.|++||+.+++. ...+ .+|.+.|.+++|+|+ +.+|++|+.||.
T Consensus 291 ~~~~~~~~~~v~~~~~s~~g~-~l~~g~~dg~i~vwd~~~~~~-~~~~~~~~~~h~~~v~~l~~s~d-g~~l~sgs~D~~ 367 (380)
T 3iz6_a 291 PDRNDNELPIVTSVAFSISGR-LLFAGYSNGDCYVWDTLLAEM-VLNLGTLQNSHEGRISCLGLSSD-GSALCTGSWDKN 367 (380)
T ss_dssp CSSSCCSSCSCSEEEECSSSS-EEEEECTTSCEEEEETTTCCE-EEEECCSCSSCCCCCCEEEECSS-SSEEEEECTTSC
T ss_pred ccccccccCceEEEEECCCCC-EEEEEECCCCEEEEECCCCce-EEEEecccCCCCCceEEEEECCC-CCEEEEeeCCCC
Confidence 2 3489999999999 799999999999999988763 3333 679999999999999 889999999999
Q ss_pred EEEEecCCCCCC
Q 021121 305 VYVWQQGMDPRA 316 (317)
Q Consensus 305 i~~w~~~~~~~~ 316 (317)
|++|++....+.
T Consensus 368 i~iW~~~~~~~i 379 (380)
T 3iz6_a 368 LKIWAFSGHRKI 379 (380)
T ss_dssp EEEEECCSSSSC
T ss_pred EEEEecCCCccc
Confidence 999999876553
No 10
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-48 Score=319.83 Aligned_cols=291 Identities=21% Similarity=0.326 Sum_probs=229.6
Q ss_pred cCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeec-CCCCeeEEEecCCCCCeEEEEEcCCe
Q 021121 6 TPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFD-TADGVYDLAWSESHDSLLIAAVADGS 84 (317)
Q Consensus 6 ~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~ 84 (317)
|..+|.+++|+| + ++++++. ||.|++|++.............. |...|.+++|+|++ .+|++|+.|+.
T Consensus 13 h~~~v~~~~~s~--~--~las~~~------D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~-~~las~s~D~~ 81 (330)
T 2hes_X 13 YKEKIWSFDFSQ--G--ILATGST------DRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHT-SLLAAGSFDST 81 (330)
T ss_dssp CSSCEEEEEEET--T--EEEEEES------SSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTS-SEEEEEETTSC
T ss_pred CCCceeeeccCC--C--EEEEEcC------CCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCC-CEEEEEeCCCc
Confidence 778999999999 4 4555554 99999999986542222211123 88899999999998 69999999999
Q ss_pred EEEEEeCCCC----CCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCC----ceeEEeeccccceEEEE
Q 021121 85 VKIYDTALPP----TANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRP----TSVRTFKEHAYCVYNAT 156 (317)
Q Consensus 85 i~v~~~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~----~~~~~~~~~~~~v~~~~ 156 (317)
|++|++.... .......+.+|...|.+++|+|++. +|++|+.|+.|++||++.. +.+..+..|...|.+++
T Consensus 82 v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~-~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~ 160 (330)
T 2hes_X 82 VSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGY-YLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVI 160 (330)
T ss_dssp EEEEEC-------CCCEEEEEEC----CEEEEEECTTSC-EEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEE
T ss_pred EEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCC-EEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEE
Confidence 9999986421 1234566789999999999999998 9999999999999999432 45677888999999999
Q ss_pred EecCCCCeEEEEeCCCeEEEEeCCCC--CceeeeccCccceEEEEecCCC--CcEEEEEecCCcEEEEEccCCC------
Q 021121 157 WNPRHSDVFCSASGDCTLRIWDVREM--GSTMIIPAHEFEILACDWNKYD--DCLIASASVDKSIKIWDVRNYR------ 226 (317)
Q Consensus 157 ~~~~~~~~l~~~~~dg~i~i~d~~~~--~~~~~~~~~~~~v~~i~~~~~~--~~~l~~~~~d~~i~v~d~~~~~------ 226 (317)
|+|+ +.+|++++.|+.|++||.+++ +++..+.+|...|.+++|+| + +..|++++.|++|++||++...
T Consensus 161 ~~p~-~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~ 238 (330)
T 2hes_X 161 WHPS-EALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDK-TEGVFRLCSGSDDSTVRVWKYMGDDEDDQQE 238 (330)
T ss_dssp ECSS-SSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECC-SSSSCEEEEEETTSCEEEEEEEEECTTSCEE
T ss_pred ECCC-CCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecC-CCCeeEEEEEeCCCeEEEEEecCCCccccce
Confidence 9998 899999999999999999876 56778889999999999999 6 6789999999999999997642
Q ss_pred -ccEEEEec-CCCceeEEEecCCCCeeEEeeecCCeEEEEeccccc--ceeeeeecccc-eeEeEEEEec-cCCeEEEee
Q 021121 227 -VPIAVLNG-HGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVED--ALVGRYDHHTE-FAVGVDMSVL-VEGLLASTG 300 (317)
Q Consensus 227 -~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~--~~~~~~~~~~~-~v~~~~~~~~-~~~~l~s~~ 300 (317)
.....+.. |...|.+++|++++ +|++++.||.|++||..+++ ........|.. .|.+++|+|. ++.+|++|+
T Consensus 239 ~~~~~~~~~~h~~~v~~v~~s~~~--~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s 316 (330)
T 2hes_X 239 WVCEAILPDVHKRQVYNVAWGFNG--LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGG 316 (330)
T ss_dssp EEEEEECCSCCSSCEEEEEECTTS--CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEE
T ss_pred eEEeeecccccccceEEEEEcCCC--EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEec
Confidence 12333444 88999999999765 69999999999999988764 22233457776 8999999993 278999999
Q ss_pred cCCcEEEEecCC
Q 021121 301 WDELVYVWQQGM 312 (317)
Q Consensus 301 ~dg~i~~w~~~~ 312 (317)
.||.|++|++..
T Consensus 317 ~Dg~v~~W~~~~ 328 (330)
T 2hes_X 317 DDGIVNFWSLEK 328 (330)
T ss_dssp TTSEEEEEEC--
T ss_pred CCCcEEEEEecc
Confidence 999999999864
No 11
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1e-47 Score=322.05 Aligned_cols=291 Identities=19% Similarity=0.263 Sum_probs=245.5
Q ss_pred eecCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeee----------------cCCCCeeEEE
Q 021121 4 FKTPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAF----------------DTADGVYDLA 67 (317)
Q Consensus 4 ~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~----------------~~~~~v~~~~ 67 (317)
+.|...|.+++|+| ++.+++++. ++.+++|++..+.. ...+... .+...|++++
T Consensus 61 ~~h~~~V~~v~fsp--dg~~la~g~-------~~~v~i~~~~~g~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~ 130 (393)
T 1erj_A 61 LDHTSVVCCVKFSN--DGEYLATGC-------NKTTQVYRVSDGSL-VARLSDDSAANKDPENLNTSSSPSSDLYIRSVC 130 (393)
T ss_dssp EECSSCCCEEEECT--TSSEEEEEC-------BSCEEEEETTTCCE-EEEECC-----------------CCCCBEEEEE
T ss_pred cCCCCEEEEEEECC--CCCEEEEEc-------CCcEEEEEecCCCE-EEEecCccccccccccccccccCCCceeEEEEE
Confidence 45888999999999 677777765 67999999987652 1111100 1222499999
Q ss_pred ecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeec
Q 021121 68 WSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKE 147 (317)
Q Consensus 68 ~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~ 147 (317)
|+|++ .+|++|+.|+.|++||+... +....+.+|...|.+++|+|++. +|++++.|+.|++||+++++....+.
T Consensus 131 ~s~dg-~~l~s~~~d~~i~iwd~~~~---~~~~~~~~h~~~v~~~~~~p~~~-~l~s~s~d~~v~iwd~~~~~~~~~~~- 204 (393)
T 1erj_A 131 FSPDG-KFLATGAEDRLIRIWDIENR---KIVMILQGHEQDIYSLDYFPSGD-KLVSGSGDRTVRIWDLRTGQCSLTLS- 204 (393)
T ss_dssp ECTTS-SEEEEEETTSCEEEEETTTT---EEEEEECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTTEEEEEEE-
T ss_pred ECCCC-CEEEEEcCCCeEEEEECCCC---cEEEEEccCCCCEEEEEEcCCCC-EEEEecCCCcEEEEECCCCeeEEEEE-
Confidence 99998 69999999999999999865 67778889999999999999998 99999999999999999998877776
Q ss_pred cccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeee-------ccCccceEEEEecCCCCcEEEEEecCCcEEEE
Q 021121 148 HAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMII-------PAHEFEILACDWNKYDDCLIASASVDKSIKIW 220 (317)
Q Consensus 148 ~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-------~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~ 220 (317)
+...+.+++|+|.++.++++++.||.|++||+++++.+..+ .+|...|.+++|+| ++++|++++.|+.|++|
T Consensus 205 ~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~-~g~~l~s~s~d~~v~~w 283 (393)
T 1erj_A 205 IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTR-DGQSVVSGSLDRSVKLW 283 (393)
T ss_dssp CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECT-TSSEEEEEETTSEEEEE
T ss_pred cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECC-CCCEEEEEeCCCEEEEE
Confidence 56679999999955899999999999999999998877665 46888999999999 99999999999999999
Q ss_pred EccCCC-----------ccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEE
Q 021121 221 DVRNYR-----------VPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMS 289 (317)
Q Consensus 221 d~~~~~-----------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~ 289 (317)
|+++.. .+...+.+|...|.+++|+|+++ +|++|+.|+.|++||+.+++ .+..+.+|...|.+++|+
T Consensus 284 d~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~sgs~D~~v~iwd~~~~~-~~~~l~~h~~~v~~v~~~ 361 (393)
T 1erj_A 284 NLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDE-YILSGSKDRGVLFWDKKSGN-PLLMLQGHRNSVISVAVA 361 (393)
T ss_dssp EC---------------CEEEEEECCSSCEEEEEECGGGC-EEEEEETTSEEEEEETTTCC-EEEEEECCSSCEEEEEEC
T ss_pred ECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCC-EEEEEeCCCeEEEEECCCCe-EEEEECCCCCCEEEEEec
Confidence 997642 23456778999999999999998 79999999999999999886 567889999999999998
Q ss_pred ec-----cCCeEEEeecCCcEEEEecCCC
Q 021121 290 VL-----VEGLLASTGWDELVYVWQQGMD 313 (317)
Q Consensus 290 ~~-----~~~~l~s~~~dg~i~~w~~~~~ 313 (317)
+. .+.+|++|+.||.|++|++...
T Consensus 362 ~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 362 NGSSLGPEYNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp SSCTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred CCcCcCCCCCEEEEECCCCcEEECccccc
Confidence 63 1579999999999999998653
No 12
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2.6e-47 Score=310.81 Aligned_cols=288 Identities=20% Similarity=0.248 Sum_probs=242.4
Q ss_pred cCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcc-eee-eeecCCCCeeEEEecCCCCCeEEEEEcCC
Q 021121 6 TPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPAL-TEL-VAFDTADGVYDLAWSESHDSLLIAAVADG 83 (317)
Q Consensus 6 ~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~-~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 83 (317)
|...|.+++|+|+. +.++++++. |+.|++|++....... ..+ ...+|...|.+++|+|++ .+|++|+.|+
T Consensus 16 H~~~V~~l~~~~~~-~~~l~s~s~------D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg-~~l~s~s~D~ 87 (319)
T 3frx_A 16 HNGWVTSLATSAGQ-PNLLLSASR------DKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADG-AYALSASWDK 87 (319)
T ss_dssp CSSCEEEEEECSSC-TTEEEEEET------TSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTS-SEEEEEETTS
T ss_pred ccceEEEEEccCCC-ccEEEEecC------CccEEEecCCCCCccccccceEEeCCcccEEEEEECCCC-CEEEEEeCCC
Confidence 78899999999953 345555554 9999999997543221 122 233789999999999998 6999999999
Q ss_pred eEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeeccccceEEEEEecCC--
Q 021121 84 SVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRH-- 161 (317)
Q Consensus 84 ~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~-- 161 (317)
+|++||+.++ +.+..+.+|...|.+++|+|++. ++++++.|+.|++||++ ++.+..+.+|...+.++.|.|..
T Consensus 88 ~v~~wd~~~~---~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~ 162 (319)
T 3frx_A 88 TLRLWDVATG---ETYQRFVGHKSDVMSVDIDKKAS-MIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKA 162 (319)
T ss_dssp EEEEEETTTT---EEEEEEECCSSCEEEEEECTTSC-EEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC---
T ss_pred EEEEEECCCC---CeeEEEccCCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCC
Confidence 9999999876 67788899999999999999988 99999999999999996 56777888999999999999852
Q ss_pred ---CCeEEEEeCCCeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEecCCCc
Q 021121 162 ---SDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYA 238 (317)
Q Consensus 162 ---~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~ 238 (317)
+..+++++.|+.|++||+++.+....+.+|...|.+++|+| ++++|++++.|+.|++||+++.+ ++..+.. ...
T Consensus 163 ~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp-~g~~l~s~~~dg~i~iwd~~~~~-~~~~~~~-~~~ 239 (319)
T 3frx_A 163 DDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASP-DGTLIASAGKDGEIMLWNLAAKK-AMYTLSA-QDE 239 (319)
T ss_dssp ---CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECT-TSSEEEEEETTCEEEEEETTTTE-EEEEEEC-CSC
T ss_pred CCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCc-EEEEecC-CCc
Confidence 44899999999999999999888888999999999999999 99999999999999999999865 3666654 468
Q ss_pred eeEEEecCCCCeeEEeeecCCeEEEEecccccceeeee--------ecccceeEeEEEEeccCCeEEEeecCCcEEEEec
Q 021121 239 VRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRY--------DHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQ 310 (317)
Q Consensus 239 v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~--------~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~ 310 (317)
|.+++|+|++. +|++++ ++.+++|++.... ....+ ..|...+.+++|+|+ +++|++|+.||.|++|++
T Consensus 240 v~~~~~sp~~~-~la~~~-~~~i~v~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~spd-g~~l~sg~~Dg~i~vWd~ 315 (319)
T 3frx_A 240 VFSLAFSPNRY-WLAAAT-ATGIKVFSLDPQY-LVDDLRPEFAGYSKAAEPHAVSLAWSAD-GQTLFAGYTDNVIRVWQV 315 (319)
T ss_dssp EEEEEECSSSS-EEEEEE-TTEEEEEEETTEE-EEEEECCCCTTCCGGGCCCEEEEEECTT-SSEEEEEETTSCEEEEEE
T ss_pred EEEEEEcCCCC-EEEEEc-CCCcEEEEeCcCe-eeeccCccccccccCcCcceeEEEECCC-CCEEEEeecCceEEEEEE
Confidence 99999999998 577766 5569999988754 22222 235667999999999 899999999999999998
Q ss_pred CCC
Q 021121 311 GMD 313 (317)
Q Consensus 311 ~~~ 313 (317)
.+.
T Consensus 316 ~t~ 318 (319)
T 3frx_A 316 MTA 318 (319)
T ss_dssp EEC
T ss_pred eec
Confidence 653
No 13
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.4e-46 Score=305.83 Aligned_cols=284 Identities=22% Similarity=0.399 Sum_probs=245.7
Q ss_pred cCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeE
Q 021121 6 TPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSV 85 (317)
Q Consensus 6 ~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 85 (317)
|...|++++|+| ++.++++++. ||.|++|++..... ......|...|.+++|+|++ .+|++|+.|+.|
T Consensus 22 h~~~v~~~~~s~--~~~~l~s~~~------dg~i~iw~~~~~~~---~~~~~~h~~~v~~~~~~~~~-~~l~s~~~d~~i 89 (312)
T 4ery_A 22 HTKAVSSVKFSP--NGEWLASSSA------DKLIKIWGAYDGKF---EKTISGHKLGISDVAWSSDS-NLLVSASDDKTL 89 (312)
T ss_dssp CSSCEEEEEECT--TSSEEEEEET------TSCEEEEETTTCCE---EEEECCCSSCEEEEEECTTS-SEEEEEETTSEE
T ss_pred cCCcEEEEEECC--CCCEEEEeeC------CCeEEEEeCCCccc---chhhccCCCceEEEEEcCCC-CEEEEECCCCEE
Confidence 778999999999 5666776665 99999999976642 12233688899999999998 699999999999
Q ss_pred EEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeeccccceEEEEEecCCCCeE
Q 021121 86 KIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVF 165 (317)
Q Consensus 86 ~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 165 (317)
++||+..+ +.+..+.+|...|.+++|+|++. ++++++.||.|++||+++++.+..+..|..+|.+++|+|+ +.++
T Consensus 90 ~vwd~~~~---~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l 164 (312)
T 4ery_A 90 KIWDVSSG---KCLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRD-GSLI 164 (312)
T ss_dssp EEEETTTC---CEEEEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTT-SSEE
T ss_pred EEEECCCC---cEEEEEcCCCCCEEEEEEcCCCC-EEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCC-CCEE
Confidence 99999876 67778889999999999999988 9999999999999999999999999999999999999998 8899
Q ss_pred EEEeCCCeEEEEeCCCCCceeeec-cCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEecCCCcee--EE
Q 021121 166 CSASGDCTLRIWDVREMGSTMIIP-AHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVR--KV 242 (317)
Q Consensus 166 ~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~v~--~~ 242 (317)
++++.||.|++||+++++.+..+. .+..++..++|+| +++++++++.|+.|++||+++.+ .+..+.+|..... ..
T Consensus 165 ~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~ 242 (312)
T 4ery_A 165 VSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP-NGKYILAATLDNTLKLWDYSKGK-CLKTYTGHKNEKYCIFA 242 (312)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECT-TSSEEEEEETTTEEEEEETTTTE-EEEEECSSCCSSSCCCE
T ss_pred EEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECC-CCCEEEEEcCCCeEEEEECCCCc-EEEEEEecCCceEEEEE
Confidence 999999999999999988777654 4566799999999 99999999999999999999866 4677777765433 23
Q ss_pred Eec-CCCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEee--cCCcEEEEecC
Q 021121 243 KFS-PHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTG--WDELVYVWQQG 311 (317)
Q Consensus 243 ~~~-~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~--~dg~i~~w~~~ 311 (317)
.++ +++. +|++|+.||.|++||+.+++ ++..+.+|...|.+++|+|+ +.+|++++ .|+.|++|+.+
T Consensus 243 ~~~~~~~~-~l~sg~~dg~i~vwd~~~~~-~~~~~~~h~~~v~~~~~~p~-~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 243 NFSVTGGK-WIVSGSEDNLVYIWNLQTKE-IVQKLQGHTDVVISTACHPT-ENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp EEECSSSC-EEEECCTTSCEEEEETTTCC-EEEEECCCSSCEEEEEECSS-SSEEEEEECTTTCCEEEEECC
T ss_pred EEEeCCCc-EEEEECCCCEEEEEECCCch-hhhhhhccCCcEEEEeecCc-CCceEEEEccCCccEEEecCC
Confidence 444 4555 79999999999999999876 67889999999999999998 78899887 69999999975
No 14
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=6.5e-47 Score=306.44 Aligned_cols=248 Identities=17% Similarity=0.327 Sum_probs=225.2
Q ss_pred ecCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEc
Q 021121 57 FDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTV 136 (317)
Q Consensus 57 ~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~ 136 (317)
.+|.+.|++++|+|++ .+|++|+.||.|++||+.++ ..+..+..|..+|.+++|+|+++ +|++|+.|+.|++||+
T Consensus 10 ~~h~~~V~~~~fsp~~-~~l~s~~~dg~v~lWd~~~~---~~~~~~~~~~~~v~~~~~~~~~~-~l~s~s~d~~i~vwd~ 84 (304)
T 2ynn_A 10 SNRSDRVKGIDFHPTE-PWVLTTLYSGRVELWNYETQ---VEVRSIQVTETPVRAGKFIARKN-WIIVGSDDFRIRVFNY 84 (304)
T ss_dssp EEECSCEEEEEECSSS-SEEEEEETTSEEEEEETTTT---EEEEEEECCSSCEEEEEEEGGGT-EEEEEETTSEEEEEET
T ss_pred cCCCCceEEEEECCCC-CEEEEEcCCCcEEEEECCCC---ceeEEeeccCCcEEEEEEeCCCC-EEEEECCCCEEEEEEC
Confidence 3788999999999998 69999999999999999866 67778889999999999999998 9999999999999999
Q ss_pred CCCceeEEeeccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCC-ceeeeccCccceEEEEecCCCCcEEEEEecCC
Q 021121 137 DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMG-STMIIPAHEFEILACDWNKYDDCLIASASVDK 215 (317)
Q Consensus 137 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~ 215 (317)
++++.+..+.+|...|.+++|+|+ +.++++++.|++|++||++++. ....+.+|...|.+++|+|.++.+|++|+.|+
T Consensus 85 ~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~ 163 (304)
T 2ynn_A 85 NTGEKVVDFEAHPDYIRSIAVHPT-KPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDR 163 (304)
T ss_dssp TTCCEEEEEECCSSCEEEEEECSS-SSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTS
T ss_pred CCCcEEEEEeCCCCcEEEEEEcCC-CCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCC
Confidence 999999999999999999999999 8899999999999999998874 45667889999999999996788999999999
Q ss_pred cEEEEEccCCCccEEEEecCCCceeEEEecC--CCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEEeccC
Q 021121 216 SIKIWDVRNYRVPIAVLNGHGYAVRKVKFSP--HRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVE 293 (317)
Q Consensus 216 ~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 293 (317)
.|++||++...........|...+..+.|+| +++ +|++++.|+.|++||+++++ ++..+.+|...|..++|+|+ +
T Consensus 164 ~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~s~s~D~~i~iWd~~~~~-~~~~~~~h~~~v~~~~~~p~-~ 240 (304)
T 2ynn_A 164 TVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKP-YMITASDDLTIKIWDYQTKS-CVATLEGHMSNVSFAVFHPT-L 240 (304)
T ss_dssp EEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCC-EEEEEETTSEEEEEETTTTE-EEEEEECCSSCEEEEEECSS-S
T ss_pred eEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCC-EEEEEcCCCeEEEEeCCCCc-cceeeCCCCCCEEEEEECCC-C
Confidence 9999999887765555566778899999987 555 79999999999999999876 67889999999999999998 7
Q ss_pred CeEEEeecCCcEEEEecCCC
Q 021121 294 GLLASTGWDELVYVWQQGMD 313 (317)
Q Consensus 294 ~~l~s~~~dg~i~~w~~~~~ 313 (317)
.+|++|+.||.|++||+.+.
T Consensus 241 ~~l~s~s~Dg~i~iWd~~~~ 260 (304)
T 2ynn_A 241 PIIISGSEDGTLKIWNSSTY 260 (304)
T ss_dssp SEEEEEETTSCEEEEETTTC
T ss_pred CEEEEEcCCCeEEEEECCCC
Confidence 89999999999999998764
No 15
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=2.2e-46 Score=308.53 Aligned_cols=289 Identities=18% Similarity=0.267 Sum_probs=235.5
Q ss_pred cCcceeEEEE-----ecCCCCeEEEEEecccccccCceEEEEecCCCCCc----ceeeeeecCCCCeeEEEecCCCCCeE
Q 021121 6 TPFNGYSVKF-----SPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPA----LTELVAFDTADGVYDLAWSESHDSLL 76 (317)
Q Consensus 6 ~~~~v~~~~~-----~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~l 76 (317)
|...|++++| +|. ++.++++++. |+.|++||+...... .......+|...|.+++|+|++ .++
T Consensus 20 H~~~V~~~~~~~s~~~~~-d~~~l~sgs~------D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~-~~l 91 (343)
T 2xzm_R 20 HSDWVTSIVAGFSQKENE-DSPVLISGSR------DKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQEN-CFA 91 (343)
T ss_dssp CSSCEEEEEECCCSSTTC-CCCEEEEEET------TSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSST-TEE
T ss_pred chhhhhheeeEEEeecCC-CCCEEEEEcC------CCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCC-CEE
Confidence 7889999999 553 4666666665 999999999764321 1122234788999999999998 699
Q ss_pred EEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEee---ccccceE
Q 021121 77 IAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFK---EHAYCVY 153 (317)
Q Consensus 77 ~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~---~~~~~v~ 153 (317)
++|+.|++|++||+.++ +.+..+.+|...|.+++|+|++. +|++++.|+.|++||+.. ....... .|...|.
T Consensus 92 ~s~s~D~~v~lwd~~~~---~~~~~~~~h~~~v~~v~~sp~~~-~l~s~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~v~ 166 (343)
T 2xzm_R 92 ISSSWDKTLRLWDLRTG---TTYKRFVGHQSEVYSVAFSPDNR-QILSAGAEREIKLWNILG-ECKFSSAEKENHSDWVS 166 (343)
T ss_dssp EEEETTSEEEEEETTSS---CEEEEEECCCSCEEEEEECSSTT-EEEEEETTSCEEEEESSS-CEEEECCTTTSCSSCEE
T ss_pred EEEcCCCcEEEEECCCC---cEEEEEcCCCCcEEEEEECCCCC-EEEEEcCCCEEEEEeccC-CceeeeecccCCCceee
Confidence 99999999999999876 67778889999999999999998 999999999999999974 3333333 6788999
Q ss_pred EEEEecCC---------CCeEEEEeCCCeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEecCCcEEEEEccC
Q 021121 154 NATWNPRH---------SDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRN 224 (317)
Q Consensus 154 ~~~~~~~~---------~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~ 224 (317)
+++|+|++ +.++++++.||.|++||. +.+....+..|...|.+++|+| ++++|++|+.|+.|++||++.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s~-~g~~l~sgs~dg~v~iwd~~~ 244 (343)
T 2xzm_R 167 CVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLSISP-NGKYIATGGKDKKLLIWDILN 244 (343)
T ss_dssp EEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEEECT-TSSEEEEEETTCEEEEEESSC
T ss_pred eeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEEECC-CCCEEEEEcCCCeEEEEECCC
Confidence 99999983 268999999999999994 4566677888999999999999 999999999999999999965
Q ss_pred CCccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEeccccccee-eee-----------ecccceeEeEEEEecc
Q 021121 225 YRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALV-GRY-----------DHHTEFAVGVDMSVLV 292 (317)
Q Consensus 225 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~-~~~-----------~~~~~~v~~~~~~~~~ 292 (317)
...+...+. +...|.+++|+|++. +++ ++.|+.|++||+.+.+... ..+ .+|...|.+++|+|+
T Consensus 245 ~~~~~~~~~-~~~~v~~v~~sp~~~-~la-~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~- 320 (343)
T 2xzm_R 245 LTYPQREFD-AGSTINQIAFNPKLQ-WVA-VGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNAL- 320 (343)
T ss_dssp CSSCSEEEE-CSSCEEEEEECSSSC-EEE-EEESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSS-
T ss_pred Ccccceeec-CCCcEEEEEECCCCC-EEE-EECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCC-
Confidence 554444443 456799999999987 565 4568889999998765221 122 267788999999999
Q ss_pred CCeEEEeecCCcEEEEecCCC
Q 021121 293 EGLLASTGWDELVYVWQQGMD 313 (317)
Q Consensus 293 ~~~l~s~~~dg~i~~w~~~~~ 313 (317)
+.+|++|+.||.|++|++.+.
T Consensus 321 g~~l~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 321 GKKLFAGFTDGVIRTFSFETS 341 (343)
T ss_dssp SCCEEEEETTSEEEEEEEEEE
T ss_pred CCeEEEecCCceEEEEEEEcc
Confidence 789999999999999998753
No 16
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=7.7e-47 Score=310.30 Aligned_cols=252 Identities=19% Similarity=0.294 Sum_probs=216.9
Q ss_pred eecCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcce-eeeeecCCCCeeEEEecCCCCCeEEEEEcC
Q 021121 4 FKTPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALT-ELVAFDTADGVYDLAWSESHDSLLIAAVAD 82 (317)
Q Consensus 4 ~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 82 (317)
+++...|.+++|+| ++.+++++. ||.|+|||+...+.... .....+|...|++++|+|++ .+|++|+.|
T Consensus 79 ~~~~~~v~~~~~s~--d~~l~~~s~-------dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg-~~l~sgs~d 148 (344)
T 4gqb_B 79 VQTEAGVADLTWVG--ERGILVASD-------SGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSG-TQAVSGSKD 148 (344)
T ss_dssp EEESSCEEEEEEET--TTEEEEEET-------TSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTS-SEEEEEETT
T ss_pred eccCCCEEEEEEeC--CCeEEEEEC-------CCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCC-CEEEEEeCC
Confidence 34567899999999 677776655 99999999987764332 23344799999999999998 699999999
Q ss_pred CeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEee--ccccceEEEEEecC
Q 021121 83 GSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFK--EHAYCVYNATWNPR 160 (317)
Q Consensus 83 g~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~ 160 (317)
++|++||+.++ +.+..+.+|...|.+++|+|++..++++++.|+.|++||+++++....+. .+...+.+++|+|+
T Consensus 149 ~~i~iwd~~~~---~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~ 225 (344)
T 4gqb_B 149 ICIKVWDLAQQ---VVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQ 225 (344)
T ss_dssp SCEEEEETTTT---EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSS
T ss_pred CeEEEEECCCC---cEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCC
Confidence 99999999876 78888999999999999999987789999999999999999998887764 34567999999998
Q ss_pred CCCeEEEEeCCCeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEecCCCcee
Q 021121 161 HSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVR 240 (317)
Q Consensus 161 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~v~ 240 (317)
+++++++|+.||.|++||+++++.+..+.+|...|++++|+|...++|++|+.|++|++||+++++ +..+.+|...|+
T Consensus 226 ~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~--~~~~~~H~~~V~ 303 (344)
T 4gqb_B 226 QSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSE--LFRSQAHRDFVR 303 (344)
T ss_dssp CTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCE--EEEECCCSSCEE
T ss_pred CCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCc--EEEEcCCCCCEE
Confidence 788999999999999999999999999999999999999999334689999999999999998765 456789999999
Q ss_pred EEEecCCCCeeEEeeecCCeEEEEeccccc
Q 021121 241 KVKFSPHRRNLLASCSYDMTVCLWDFMVED 270 (317)
Q Consensus 241 ~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~ 270 (317)
+++|+|+++.+|++++.|++|++|++.+..
T Consensus 304 ~v~~sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 304 DATWSPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp EEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred EEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 999999998788899999999999997754
No 17
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.6e-46 Score=330.36 Aligned_cols=286 Identities=16% Similarity=0.147 Sum_probs=240.8
Q ss_pred CcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeEE
Q 021121 7 PFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVK 86 (317)
Q Consensus 7 ~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 86 (317)
...+.+++|+| ++..++++. ++.|++|++..... . ....+|...|++++|+|++ .+|++|+.||+|+
T Consensus 18 ~g~~~~~~~sp--dg~~l~~~~-------~~~v~l~~~~~~~~-~--~~~~~h~~~v~~~~~spdg-~~lasg~~d~~v~ 84 (611)
T 1nr0_A 18 RGTAVVLGNTP--AGDKIQYCN-------GTSVYTVPVGSLTD-T--EIYTEHSHQTTVAKTSPSG-YYCASGDVHGNVR 84 (611)
T ss_dssp TTCCCCCEECT--TSSEEEEEE-------TTEEEEEETTCSSC-C--EEECCCSSCEEEEEECTTS-SEEEEEETTSEEE
T ss_pred cCceeEEeeCC--CCCEEEeCC-------CCEEEEecCCCccc-C--eEecCCCCceEEEEECCCC-cEEEEEeCCCCEE
Confidence 45678899999 566666655 56999999975442 2 2223789999999999998 6999999999999
Q ss_pred EEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCC----CEEEEEEcCCCceeEEeeccccceEEEEEecCCC
Q 021121 87 IYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWD----DTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHS 162 (317)
Q Consensus 87 v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d----g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 162 (317)
|||+..+ .......+..|.++|.+++|+|+++ .|++++.+ +.|++|| .++....+.+|...|.+++|+|++.
T Consensus 85 lWd~~~~-~~~~~~~~~~~~~~v~~v~fs~dg~-~l~~~~~~~~~~~~v~~wd--~~~~~~~l~gh~~~v~~v~f~p~~~ 160 (611)
T 1nr0_A 85 IWDTTQT-THILKTTIPVFSGPVKDISWDSESK-RIAAVGEGRERFGHVFLFD--TGTSNGNLTGQARAMNSVDFKPSRP 160 (611)
T ss_dssp EEESSST-TCCEEEEEECSSSCEEEEEECTTSC-EEEEEECCSSCSEEEEETT--TCCBCBCCCCCSSCEEEEEECSSSS
T ss_pred EeECCCC-cceeeEeecccCCceEEEEECCCCC-EEEEEECCCCceeEEEEee--CCCCcceecCCCCCceEEEECCCCC
Confidence 9998653 2233456788999999999999998 78877754 4788887 4666778889999999999999955
Q ss_pred CeEEEEeCCCeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEe-------cC
Q 021121 163 DVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLN-------GH 235 (317)
Q Consensus 163 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-------~~ 235 (317)
..|++++.|++|++||.++++....+.+|...|.+++|+| ++++|++++.|+.|++||.++++. ...+. +|
T Consensus 161 ~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fsp-dg~~las~s~D~~i~lwd~~~g~~-~~~~~~~~~~~~~h 238 (611)
T 1nr0_A 161 FRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNP-DGSLFASTGGDGTIVLYNGVDGTK-TGVFEDDSLKNVAH 238 (611)
T ss_dssp CEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCE-EEECBCTTSSSCSS
T ss_pred eEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECC-CCCEEEEEECCCcEEEEECCCCcE-eeeecccccccccc
Confidence 5799999999999999998888888999999999999999 999999999999999999988664 55553 79
Q ss_pred CCceeEEEecCCCCeeEEeeecCCeEEEEecccccce------------------------------------------e
Q 021121 236 GYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDAL------------------------------------------V 273 (317)
Q Consensus 236 ~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~------------------------------------------~ 273 (317)
...|.+++|+|+++ +|++++.|++|++||+.+++.. .
T Consensus 239 ~~~V~~v~~spdg~-~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~ 317 (611)
T 1nr0_A 239 SGSVFGLTWSPDGT-KIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSID 317 (611)
T ss_dssp SSCEEEEEECTTSS-EEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEE
T ss_pred CCCEEEEEECCCCC-EEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcc
Confidence 99999999999998 7999999999999999875421 1
Q ss_pred eeeecccceeEeEEEEeccCCeEEEeecCCcEEEEecCCC
Q 021121 274 GRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGMD 313 (317)
Q Consensus 274 ~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~ 313 (317)
..+.+|...|++++|+|+ +++|++++.|+.|++||+...
T Consensus 318 ~~~~gh~~~v~~l~~spd-g~~l~s~s~D~~v~~Wd~~~~ 356 (611)
T 1nr0_A 318 QVRYGHNKAITALSSSAD-GKTLFSADAEGHINSWDISTG 356 (611)
T ss_dssp EEECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTC
T ss_pred eEEcCCCCCEEEEEEeCC-CCEEEEEeCCCcEEEEECCCC
Confidence 234578899999999998 899999999999999999764
No 18
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-47 Score=322.54 Aligned_cols=308 Identities=19% Similarity=0.336 Sum_probs=252.3
Q ss_pred CceecCcceeEEEEecCCCCeEEEEEecc----cccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEE
Q 021121 2 PVFKTPFNGYSVKFSPFYESRLAVATAQN----FGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLI 77 (317)
Q Consensus 2 ~~~~~~~~v~~~~~~p~~~~~~~~~~~~~----~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 77 (317)
..+.+...|.+++|+|++ ..+++++... .....||.|++||+..... ...+....|...|.+++|+|++ .+|+
T Consensus 7 ~~l~~~~~v~~~~~sp~g-~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~-~~~~~~~~~~~~v~~~~~s~~~-~~l~ 83 (416)
T 2pm9_A 7 VKLAEFSRTATFAWSHDK-IPLLVSGTVSGTVDANFSTDSSLELWSLLAADS-EKPIASLQVDSKFNDLDWSHNN-KIIA 83 (416)
T ss_dssp ---CEEEESCBCCBCSSS-SCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGG-CSCSCCCCCSSCEEEEEECSSS-SCEE
T ss_pred hhHhhhhhcceEeeCCCC-CCEEEEEecCcccccccCCCCeEEEEEccCCCC-CcEEEEEecCCceEEEEECCCC-CeEE
Confidence 445566789999999952 2255555110 0001289999999987642 1233444688899999999998 6999
Q ss_pred EEEcCCeEEEEEeCCCCC-CCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCc------eeEE---eec
Q 021121 78 AAVADGSVKIYDTALPPT-ANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPT------SVRT---FKE 147 (317)
Q Consensus 78 ~~~~dg~i~v~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~------~~~~---~~~ 147 (317)
+|+.||.|++|++..... ......+..|...|.+++|+|++..+|++++.||.|++||+.+++ .... +..
T Consensus 84 ~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~ 163 (416)
T 2pm9_A 84 GALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMS 163 (416)
T ss_dssp EEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCC
T ss_pred EEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccC
Confidence 999999999999986322 246677889999999999999844499999999999999999876 3333 356
Q ss_pred cccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeeccC------ccceEEEEecCCCCcEEEEEecCC---cEE
Q 021121 148 HAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAH------EFEILACDWNKYDDCLIASASVDK---SIK 218 (317)
Q Consensus 148 ~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~------~~~v~~i~~~~~~~~~l~~~~~d~---~i~ 218 (317)
|...|.+++|+|+++.++++++.||.|++||+++++.+..+..+ ...+.+++|+|....++++++.|+ .|+
T Consensus 164 ~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~ 243 (416)
T 2pm9_A 164 SVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSIL 243 (416)
T ss_dssp SSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCC
T ss_pred CCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEE
Confidence 88899999999987789999999999999999999888888766 788999999993347999999998 999
Q ss_pred EEEccCCCccEEEEe-cCCCceeEEEecC-CCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEEeccCCeE
Q 021121 219 IWDVRNYRVPIAVLN-GHGYAVRKVKFSP-HRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLL 296 (317)
Q Consensus 219 v~d~~~~~~~~~~~~-~~~~~v~~~~~~~-~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 296 (317)
+||+++...+...+. +|...|++++|+| +++ +|++++.|+.|++||+++++ .+..+..|...|.+++|+|+++.+|
T Consensus 244 ~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-~l~s~~~dg~v~~wd~~~~~-~~~~~~~~~~~v~~~~~s~~~~~~l 321 (416)
T 2pm9_A 244 IWDLRNANTPLQTLNQGHQKGILSLDWCHQDEH-LLLSSGRDNTVLLWNPESAE-QLSQFPARGNWCFKTKFAPEAPDLF 321 (416)
T ss_dssp EEETTSTTSCSBCCCSCCSSCEEEEEECSSCSS-CEEEEESSSEEEEECSSSCC-EEEEEECSSSCCCCEEECTTCTTEE
T ss_pred EEeCCCCCCCcEEeecCccCceeEEEeCCCCCC-eEEEEeCCCCEEEeeCCCCc-cceeecCCCCceEEEEECCCCCCEE
Confidence 999998766677777 8999999999999 676 79999999999999999876 6678889999999999999944899
Q ss_pred EEeecCCcEEEEecCCCC
Q 021121 297 ASTGWDELVYVWQQGMDP 314 (317)
Q Consensus 297 ~s~~~dg~i~~w~~~~~~ 314 (317)
++++.||.|++|++....
T Consensus 322 ~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 322 ACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp EECCSSSEEEEEESCCCC
T ss_pred EEEecCCcEEEEEccCCC
Confidence 999999999999998654
No 19
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=5.5e-45 Score=299.12 Aligned_cols=287 Identities=17% Similarity=0.202 Sum_probs=249.8
Q ss_pred eecCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCc--ceeeeeecCCCCeeEEEecCCCCCeEEEEEc
Q 021121 4 FKTPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPA--LTELVAFDTADGVYDLAWSESHDSLLIAAVA 81 (317)
Q Consensus 4 ~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 81 (317)
+.|...|.+++|+| ++.++++++ +|.|++|++...... ...+....|...|.+++|+|++ .+|++++.
T Consensus 48 ~~h~~~v~~~~~~~--~~~~l~~~~-------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~ 117 (337)
T 1gxr_A 48 LNHGEVVCAVTISN--PTRHVYTGG-------KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDG-CTLIVGGE 117 (337)
T ss_dssp ECCSSCCCEEEECS--SSSEEEEEC-------BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTS-SEEEEEES
T ss_pred ccCCCceEEEEEec--CCcEEEEcC-------CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCC-CEEEEEcC
Confidence 45888999999999 677777776 789999999875432 2222323688899999999998 69999999
Q ss_pred CCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeeccccceEEEEEecCC
Q 021121 82 DGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRH 161 (317)
Q Consensus 82 dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 161 (317)
||.|++||+..+ .......+..|...|.+++|+|++. ++++++.||.|++||+++++.+..+..|...+.+++|+|+
T Consensus 118 d~~i~~~d~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~- 194 (337)
T 1gxr_A 118 ASTLSIWDLAAP-TPRIKAELTSSAPACYALAISPDSK-VCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISND- 194 (337)
T ss_dssp SSEEEEEECCCC---EEEEEEECSSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTT-
T ss_pred CCcEEEEECCCC-CcceeeecccCCCceEEEEECCCCC-EEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCC-
Confidence 999999999865 2224556778999999999999988 9999999999999999999999999999999999999998
Q ss_pred CCeEEEEeCCCeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEecCCCceeE
Q 021121 162 SDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRK 241 (317)
Q Consensus 162 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~v~~ 241 (317)
++++++++.||.|++||+++++.+..+. +...+.+++|+| +++++++++.++.|++||+++.+ ...+..|...|.+
T Consensus 195 ~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~-~~~~l~~~~~~~~i~~~~~~~~~--~~~~~~~~~~v~~ 270 (337)
T 1gxr_A 195 GTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCP-TGEWLAVGMESSNVEVLHVNKPD--KYQLHLHESCVLS 270 (337)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECT-TSSEEEEEETTSCEEEEETTSSC--EEEECCCSSCEEE
T ss_pred CCEEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEECC-CCCEEEEEcCCCcEEEEECCCCC--eEEEcCCccceeE
Confidence 8999999999999999999988777765 677899999999 99999999999999999999865 4567789999999
Q ss_pred EEecCCCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEeecCCcEEEEecC
Q 021121 242 VKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQG 311 (317)
Q Consensus 242 ~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~ 311 (317)
++|+|+++ +|++++.||.|++||+.+++.. ....|...+.+++|+|+ +.+|++++.||.|++|++.
T Consensus 271 ~~~~~~~~-~l~~~~~dg~i~~~~~~~~~~~--~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 271 LKFAYCGK-WFVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISVD-DKYIVTGSGDKKATVYEVI 336 (337)
T ss_dssp EEECTTSS-EEEEEETTSEEEEEETTTCCEE--EEEECSSCEEEEEECTT-SCEEEEEETTSCEEEEEEE
T ss_pred EEECCCCC-EEEEecCCCcEEEEECCCCeEE--EEecCCCcEEEEEECCC-CCEEEEecCCCeEEEEEEe
Confidence 99999998 7999999999999999988743 33457889999999999 7899999999999999973
No 20
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.5e-47 Score=319.55 Aligned_cols=302 Identities=17% Similarity=0.263 Sum_probs=251.4
Q ss_pred ceecCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcc-eeeeeecCCCCeeEEEecCCCCCeEEEEEc
Q 021121 3 VFKTPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPAL-TELVAFDTADGVYDLAWSESHDSLLIAAVA 81 (317)
Q Consensus 3 ~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 81 (317)
.+.+...|.+++|+| ++.++++++. ||.|++|++....... .......|...|.+++|+|++..+|++++.
T Consensus 63 ~~~~~~~v~~~~~s~--~~~~l~~~~~------dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~ 134 (416)
T 2pm9_A 63 SLQVDSKFNDLDWSH--NNKIIAGALD------NGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGN 134 (416)
T ss_dssp CCCCSSCEEEEEECS--SSSCEEEEES------SSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECS
T ss_pred EEecCCceEEEEECC--CCCeEEEEcc------CCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcC
Confidence 355788999999999 5666666665 8999999998732212 222333688999999999984479999999
Q ss_pred CCeEEEEEeCCCC------CCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeecc------c
Q 021121 82 DGSVKIYDTALPP------TANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEH------A 149 (317)
Q Consensus 82 dg~i~v~~~~~~~------~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~------~ 149 (317)
||.|++||+.... ..........|...|.+++|+|++..++++++.||.|++||+++++.+..+..+ .
T Consensus 135 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~ 214 (416)
T 2pm9_A 135 NGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIK 214 (416)
T ss_dssp SSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCC
T ss_pred CCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccC
Confidence 9999999998763 222233456799999999999995559999999999999999999988888766 7
Q ss_pred cceEEEEEecCCCCeEEEEeCCC---eEEEEeCCCC-Cceeeec-cCccceEEEEecCCCCcEEEEEecCCcEEEEEccC
Q 021121 150 YCVYNATWNPRHSDVFCSASGDC---TLRIWDVREM-GSTMIIP-AHEFEILACDWNKYDDCLIASASVDKSIKIWDVRN 224 (317)
Q Consensus 150 ~~v~~~~~~~~~~~~l~~~~~dg---~i~i~d~~~~-~~~~~~~-~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~ 224 (317)
..+.+++|+|++..++++++.|+ .|++||++++ +....+. .|...+.+++|+|.++++|++++.|+.|++||+++
T Consensus 215 ~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~ 294 (416)
T 2pm9_A 215 QQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPES 294 (416)
T ss_dssp CCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSS
T ss_pred CceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCC
Confidence 88999999999668999999999 9999999986 5667777 89999999999987789999999999999999998
Q ss_pred CCccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeee-----------------------------
Q 021121 225 YRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGR----------------------------- 275 (317)
Q Consensus 225 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~----------------------------- 275 (317)
.+ ++..+..|...|++++|+|+++.+|++++.|+.|++||+.+.......
T Consensus 295 ~~-~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (416)
T 2pm9_A 295 AE-QLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSV 373 (416)
T ss_dssp CC-EEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCS
T ss_pred Cc-cceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCccccccccccccccccccc
Confidence 76 478888999999999999999448999999999999999876522111
Q ss_pred -----eecccceeEeEEEEeccCCeEEEeecCCcEEEEecCCCC
Q 021121 276 -----YDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGMDP 314 (317)
Q Consensus 276 -----~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~ 314 (317)
...|..++.+++|+|+ +++|++++.||.|++|++.+++
T Consensus 374 ~~~~~~~~~~~~~~~~~~s~d-g~~la~~~~d~~v~~w~~~~~~ 416 (416)
T 2pm9_A 374 FHLQAPTWYGEPSPAAHWAFG-GKLVQITPDGKGVSITNPKISG 416 (416)
T ss_dssp SCCCCCSTTCCCSCCCEEETT-TEEECBCTTSSCBCCBCCCCC-
T ss_pred ccccCCccccCCccceEEeeC-CeEEEEeCCCCeEEEEEeccCC
Confidence 0115677889999999 8999999999999999998764
No 21
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.4e-45 Score=325.63 Aligned_cols=288 Identities=26% Similarity=0.361 Sum_probs=244.5
Q ss_pred ecCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcC--
Q 021121 5 KTPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVAD-- 82 (317)
Q Consensus 5 ~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-- 82 (317)
.|...|++++|+| ++.++++++. ||.|+|||+....... ......|...|.+++|+|++ ..|++++.+
T Consensus 57 ~h~~~v~~~~~sp--dg~~lasg~~------d~~v~lWd~~~~~~~~-~~~~~~~~~~v~~v~fs~dg-~~l~~~~~~~~ 126 (611)
T 1nr0_A 57 EHSHQTTVAKTSP--SGYYCASGDV------HGNVRIWDTTQTTHIL-KTTIPVFSGPVKDISWDSES-KRIAAVGEGRE 126 (611)
T ss_dssp CCSSCEEEEEECT--TSSEEEEEET------TSEEEEEESSSTTCCE-EEEEECSSSCEEEEEECTTS-CEEEEEECCSS
T ss_pred CCCCceEEEEECC--CCcEEEEEeC------CCCEEEeECCCCccee-eEeecccCCceEEEEECCCC-CEEEEEECCCC
Confidence 3778999999999 6888888876 9999999997544222 22334688999999999998 577777764
Q ss_pred --CeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeeccccceEEEEEecC
Q 021121 83 --GSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPR 160 (317)
Q Consensus 83 --g~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 160 (317)
+.|++||. + .....+.+|...|.+++|+|+++..|++++.|+.|++||..+++....+.+|...|.+++|+|+
T Consensus 127 ~~~~v~~wd~--~---~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspd 201 (611)
T 1nr0_A 127 RFGHVFLFDT--G---TSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPD 201 (611)
T ss_dssp CSEEEEETTT--C---CBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTT
T ss_pred ceeEEEEeeC--C---CCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCC
Confidence 46778873 2 4556778999999999999998767999999999999999998888999999999999999999
Q ss_pred CCCeEEEEeCCCeEEEEeCCCCCceeeec-------cCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCc------
Q 021121 161 HSDVFCSASGDCTLRIWDVREMGSTMIIP-------AHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRV------ 227 (317)
Q Consensus 161 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-------~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~------ 227 (317)
+++|++++.|+.|++||+++++....+. +|...|.+++|+| ++++|++++.|++|++||+++++.
T Consensus 202 -g~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~sp-dg~~l~s~s~D~~v~lWd~~~~~~~~~~~~ 279 (611)
T 1nr0_A 202 -GSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSP-DGTKIASASADKTIKIWNVATLKVEKTIPV 279 (611)
T ss_dssp -SSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred -CCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECC-CCCEEEEEeCCCeEEEEeCCCCceeeeecC
Confidence 8999999999999999999988877773 6999999999999 999999999999999999986532
Q ss_pred ------------------------------------cEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccc
Q 021121 228 ------------------------------------PIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDA 271 (317)
Q Consensus 228 ------------------------------------~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~ 271 (317)
+...+.+|...|++++|+|+++ +|++++.|+.|++||+.+++.
T Consensus 280 ~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~-~l~s~s~D~~v~~Wd~~~~~~ 358 (611)
T 1nr0_A 280 GTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGK-TLFSADAEGHINSWDISTGIS 358 (611)
T ss_dssp CSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCCE
T ss_pred CCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCC-EEEEEeCCCcEEEEECCCCce
Confidence 1223457999999999999998 799999999999999998764
Q ss_pred eeeeeecccceeEeEEEEeccCCeEEEeecCCcEEEEecCC
Q 021121 272 LVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGM 312 (317)
Q Consensus 272 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~ 312 (317)
.......|...|.+++|+++ ..+++++.|+.+++|++..
T Consensus 359 ~~~~~~~h~~~v~~~~~s~~--~~l~s~s~d~~v~~w~~~~ 397 (611)
T 1nr0_A 359 NRVFPDVHATMITGIKTTSK--GDLFTVSWDDHLKVVPAGG 397 (611)
T ss_dssp EECSSCSCSSCEEEEEECTT--SCEEEEETTTEEEEECSSS
T ss_pred eeecccCCcceEEEEEECCC--CcEEEEEcCCceEEeecCC
Confidence 33223678999999999974 5789999999999999865
No 22
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1e-45 Score=311.43 Aligned_cols=247 Identities=24% Similarity=0.340 Sum_probs=229.7
Q ss_pred eecCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEE
Q 021121 56 AFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWT 135 (317)
Q Consensus 56 ~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd 135 (317)
..+|..+|++++|+|++ .+|++|+.||.|++||+.++ +....+.+|...|.+++|+|++. +|++|+.|+.|++||
T Consensus 104 l~gh~~~V~~~~~~p~~-~~l~s~s~Dg~i~vwd~~~~---~~~~~l~~h~~~V~~v~~~~~~~-~l~sgs~D~~i~iwd 178 (410)
T 1vyh_C 104 LSGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYETG---DFERTLKGHTDSVQDISFDHSGK-LLASCSADMTIKLWD 178 (410)
T ss_dssp EECCSSCEEEEEECSSS-SEEEEEESSSCEEEEETTTC---CCCEEECCCSSCEEEEEECTTSS-EEEEEETTSCCCEEE
T ss_pred ecccCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCCC---cEEEEEeccCCcEEEEEEcCCCC-EEEEEeCCCeEEEEe
Confidence 34789999999999998 69999999999999999876 67788899999999999999988 999999999999999
Q ss_pred cCCCceeEEeeccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEecCC
Q 021121 136 VDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDK 215 (317)
Q Consensus 136 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~ 215 (317)
+.+++++..+.+|...|.+++|+|+ ++++++++.|+.|++||++++..+..+.+|...+.++.++| ++.++++++.|+
T Consensus 179 ~~~~~~~~~~~~h~~~V~~v~~~p~-~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~-~g~~l~s~s~D~ 256 (410)
T 1vyh_C 179 FQGFECIRTMHGHDHNVSSVSIMPN-GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ-DGTLIASCSNDQ 256 (410)
T ss_dssp TTSSCEEECCCCCSSCEEEEEECSS-SSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECT-TSSEEEEEETTS
T ss_pred CCCCceeEEEcCCCCCEEEEEEeCC-CCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECC-CCCEEEEEcCCC
Confidence 9999999999999999999999998 88999999999999999999999999999999999999999 999999999999
Q ss_pred cEEEEEccCCCccEEEEecCCCceeEEEecCC--------------------CCeeEEeeecCCeEEEEecccccceeee
Q 021121 216 SIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPH--------------------RRNLLASCSYDMTVCLWDFMVEDALVGR 275 (317)
Q Consensus 216 ~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~~--------------------~~~~l~~~~~d~~i~vwd~~~~~~~~~~ 275 (317)
.|++||+++.+ ....+.+|...|.+++|+|+ +. +|++|+.|+.|++||+++++ ++..
T Consensus 257 ~v~vwd~~~~~-~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~l~sgs~D~~i~iwd~~~~~-~~~~ 333 (410)
T 1vyh_C 257 TVRVWVVATKE-CKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGP-FLLSGSRDKTIKMWDVSTGM-CLMT 333 (410)
T ss_dssp CEEEEETTTCC-EEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CC-EEEEEETTSEEEEEETTTTE-EEEE
T ss_pred eEEEEECCCCc-eeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCC-EEEEEeCCCeEEEEECCCCc-eEEE
Confidence 99999999866 47788899999999999996 44 79999999999999999886 5678
Q ss_pred eecccceeEeEEEEeccCCeEEEeecCCcEEEEecCCC
Q 021121 276 YDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGMD 313 (317)
Q Consensus 276 ~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~ 313 (317)
+.+|...|.+++|+|+ +.+|++++.||.|++||+...
T Consensus 334 ~~~h~~~v~~v~~~~~-g~~l~s~s~D~~i~vwd~~~~ 370 (410)
T 1vyh_C 334 LVGHDNWVRGVLFHSG-GKFILSCADDKTLRVWDYKNK 370 (410)
T ss_dssp EECCSSCEEEEEECSS-SSCEEEEETTTEEEEECCTTS
T ss_pred EECCCCcEEEEEEcCC-CCEEEEEeCCCeEEEEECCCC
Confidence 8899999999999998 889999999999999999764
No 23
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=5.9e-45 Score=320.13 Aligned_cols=276 Identities=26% Similarity=0.432 Sum_probs=243.8
Q ss_pred cCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeE
Q 021121 6 TPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSV 85 (317)
Q Consensus 6 ~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 85 (317)
|...|.+++|+| ++.++++++. ||.|++||+.... . .....|...|.+++|+|++ .++++|+.||.|
T Consensus 302 h~~~v~~~~~~~--~~~~l~t~~~------d~~i~~w~~~~~~--~--~~~~~~~~~v~~~~~s~~g-~~l~~~~~dg~v 368 (577)
T 2ymu_A 302 HSSSVWGVAFSP--DGQTIASASD------DKTVKLWNRNGQH--L--QTLTGHSSSVWGVAFSPDG-QTIASASDDKTV 368 (577)
T ss_dssp CSSCEEEEEECT--TSSEEEEEET------TSCEEEEETTSCE--E--EEECCCSSCEEEEEECTTS-SEEEEEETTSEE
T ss_pred CCCCeEEEEECC--CCCEEEEEeC------CCeEEEEeCCCCe--e--EEEeCCCCCEEEEEECCCC-CEEEEEeCCCEE
Confidence 677899999999 5666666665 8999999986543 2 2233688899999999998 699999999999
Q ss_pred EEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeeccccceEEEEEecCCCCeE
Q 021121 86 KIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVF 165 (317)
Q Consensus 86 ~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 165 (317)
++|+.. .+.+..+..|...|.+++|+|+++ +|++++.|+.|++||. +++.+..+..|...|++++|+|+ ++++
T Consensus 369 ~~~~~~----~~~~~~~~~~~~~v~~~~~s~dg~-~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d-~~~l 441 (577)
T 2ymu_A 369 KLWNRN----GQLLQTLTGHSSSVRGVAFSPDGQ-TIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPD-DQTI 441 (577)
T ss_dssp EEEETT----CCEEEEEECCSSCEEEEEECTTSS-CEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTT-SSEE
T ss_pred EEEcCC----CCEEEEecCCCCCeEEEEECCCCC-EEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCC-CCEE
Confidence 999953 256777889999999999999998 8999999999999995 57788889999999999999999 8899
Q ss_pred EEEeCCCeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEecCCCceeEEEec
Q 021121 166 CSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFS 245 (317)
Q Consensus 166 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~ 245 (317)
++++.|+.|++||. +++.+..+..|...|.+++|+| ++++|++++.|+.|++||.. ++ .+..+.+|...|++++|+
T Consensus 442 ~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~sp-d~~~las~~~d~~i~iw~~~-~~-~~~~~~~h~~~v~~l~~s 517 (577)
T 2ymu_A 442 ASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSP-DGQTIASASDDKTVKLWNRN-GQ-LLQTLTGHSSSVRGVAFS 517 (577)
T ss_dssp EEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECT-TSCEEEEEETTSEEEEEETT-SC-EEEEEECCSSCEEEEEEC
T ss_pred EEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcC-CCCEEEEEeCCCEEEEEcCC-CC-EEEEEeCCCCCEEEEEEc
Confidence 99999999999996 5677788889999999999999 99999999999999999964 33 578889999999999999
Q ss_pred CCCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEeecCCcEEEEe
Q 021121 246 PHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQ 309 (317)
Q Consensus 246 ~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~ 309 (317)
|+++ +|++++.|+.|++||.. ++ ++..+.+|...|++++|+|+ +++|+|++.|+.|++||
T Consensus 518 ~dg~-~l~s~~~dg~v~lwd~~-~~-~~~~~~~h~~~v~~~~fs~d-g~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 518 PDGQ-TIASASDDKTVKLWNRN-GQ-LLQTLTGHSSSVWGVAFSPD-GQTIASASSDKTVKLWN 577 (577)
T ss_dssp TTSS-CEEEEETTSEEEEECTT-SC-EEEEEECCSSCEEEEEECTT-SSCEEEEETTSCEEEEC
T ss_pred CCCC-EEEEEECcCEEEEEeCC-CC-EEEEEcCCCCCEEEEEEcCC-CCEEEEEeCCCEEEEeC
Confidence 9998 79999999999999963 43 67788999999999999999 78999999999999997
No 24
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.1e-45 Score=301.13 Aligned_cols=248 Identities=21% Similarity=0.370 Sum_probs=224.7
Q ss_pred cCCCCeeEEEecCCC---CCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEE
Q 021121 58 DTADGVYDLAWSESH---DSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLW 134 (317)
Q Consensus 58 ~~~~~v~~~~~~~~~---~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iw 134 (317)
.|.+.|.+++|+|++ ..+|++|+.|++|++|++... .......+.+|...|.+++|++++. ++++++.|+.|++|
T Consensus 30 ~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~-~~~~~~~l~gh~~~v~~~~~~~~~~-~l~s~s~D~~i~lW 107 (321)
T 3ow8_A 30 AHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDE-RLDLQWSLEGHQLGVVSVDISHTLP-IAASSSLDAHIRLW 107 (321)
T ss_dssp SSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETT-EEEEEEEECCCSSCEEEEEECSSSS-EEEEEETTSEEEEE
T ss_pred cCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCC-CeeeeeeeccCCCCEEEEEECCCCC-EEEEEeCCCcEEEE
Confidence 699999999999852 358999999999999999754 2223446789999999999999988 99999999999999
Q ss_pred EcCCCceeEEeeccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEecC
Q 021121 135 TVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVD 214 (317)
Q Consensus 135 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d 214 (317)
|+++++.+..+..+...+.+++|+|+ ++++++++.||.|++||+++++....+..+...+.+++|+| ++++|++++.|
T Consensus 108 d~~~~~~~~~~~~~~~~~~~~~~spd-g~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~sp-dg~~lasg~~d 185 (321)
T 3ow8_A 108 DLENGKQIKSIDAGPVDAWTLAFSPD-SQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSP-DGKYLASGAID 185 (321)
T ss_dssp ETTTTEEEEEEECCTTCCCCEEECTT-SSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECT-TSSEEEEEETT
T ss_pred ECCCCCEEEEEeCCCccEEEEEECCC-CCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECC-CCCEEEEEcCC
Confidence 99999999999989999999999999 89999999999999999999999888888999999999999 99999999999
Q ss_pred CcEEEEEccCCCccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEEeccCC
Q 021121 215 KSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEG 294 (317)
Q Consensus 215 ~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 294 (317)
+.|++||+++++ .+..+.+|..+|++++|+|+++ +|++++.|+.|++||+++.+ ....+.+|...|.+++|+|+ +.
T Consensus 186 g~i~iwd~~~~~-~~~~~~~h~~~v~~l~~spd~~-~l~s~s~dg~i~iwd~~~~~-~~~~~~~h~~~v~~~~~sp~-~~ 261 (321)
T 3ow8_A 186 GIINIFDIATGK-LLHTLEGHAMPIRSLTFSPDSQ-LLVTASDDGYIKIYDVQHAN-LAGTLSGHASWVLNVAFCPD-DT 261 (321)
T ss_dssp SCEEEEETTTTE-EEEEECCCSSCCCEEEECTTSC-EEEEECTTSCEEEEETTTCC-EEEEECCCSSCEEEEEECTT-SS
T ss_pred CeEEEEECCCCc-EEEEEcccCCceeEEEEcCCCC-EEEEEcCCCeEEEEECCCcc-eeEEEcCCCCceEEEEECCC-CC
Confidence 999999999865 4788899999999999999998 79999999999999999876 56788999999999999998 78
Q ss_pred eEEEeecCCcEEEEecCCC
Q 021121 295 LLASTGWDELVYVWQQGMD 313 (317)
Q Consensus 295 ~l~s~~~dg~i~~w~~~~~ 313 (317)
+|++++.|+.|++||+...
T Consensus 262 ~l~s~s~D~~v~iwd~~~~ 280 (321)
T 3ow8_A 262 HFVSSSSDKSVKVWDVGTR 280 (321)
T ss_dssp EEEEEETTSCEEEEETTTT
T ss_pred EEEEEeCCCcEEEEeCCCC
Confidence 9999999999999999764
No 25
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1e-45 Score=306.91 Aligned_cols=288 Identities=19% Similarity=0.323 Sum_probs=243.6
Q ss_pred cCcceeEEEEecC---CCCeEEEEEecccccccCceEEEEecCCCCCcceeeeee---cCCCCeeEEEecCCCC---CeE
Q 021121 6 TPFNGYSVKFSPF---YESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAF---DTADGVYDLAWSESHD---SLL 76 (317)
Q Consensus 6 ~~~~v~~~~~~p~---~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~---~~l 76 (317)
|..+|++++|+|+ ....++++++ ++.|++|++..... ...+..+ .+...|++++|+|++. .+|
T Consensus 17 h~~~v~~i~~~p~~~~~~~~~~~~~~-------~~~v~vw~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l 88 (366)
T 3k26_A 17 HNQPLFGVQFNWHSKEGDPLVFATVG-------SNRVTLYECHSQGE-IRLLQSYVDADADENFYTCAWTYDSNTSHPLL 88 (366)
T ss_dssp TCSCEEEEEECTTCCTTSCEEEEEEE-------TTEEEEEEECGGGC-EEEEEEEECSCTTCCEEEEEEEECTTTCCEEE
T ss_pred CCCceEEEEEecccCCCCceEEEECC-------CCEEEEEEcCCCcE-EEeeeeccccCCCCcEEEEEeccCCCCCCCEE
Confidence 7889999999984 3455666665 77999999986542 2333322 2668899999999832 589
Q ss_pred EEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEec-CCCCEEEEEcCCCEEEEEEcCCCceeEEe---eccccce
Q 021121 77 IAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNP-TRRDSFITSSWDDTVKLWTVDRPTSVRTF---KEHAYCV 152 (317)
Q Consensus 77 ~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~dg~v~iwd~~~~~~~~~~---~~~~~~v 152 (317)
++|+.||.|++||+... +.+..+..|...|.+++|+| ++. +|++++.||.|++||+++++.+..+ ..|...|
T Consensus 89 ~~~~~dg~i~v~d~~~~---~~~~~~~~~~~~i~~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v 164 (366)
T 3k26_A 89 AVAGSRGIIRIINPITM---QCIKHYVGHGNAINELKFHPRDPN-LLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEV 164 (366)
T ss_dssp EEEETTCEEEEECTTTC---CEEEEEESCCSCEEEEEECSSCTT-EEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCE
T ss_pred EEecCCCEEEEEEchhc---eEeeeecCCCCcEEEEEECCCCCC-EEEEEeCCCeEEEEEeecCeEEEEecccccccCce
Confidence 99999999999999866 67778889999999999999 665 9999999999999999999988888 6799999
Q ss_pred EEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeecc----------------------------CccceEEEEecCCC
Q 021121 153 YNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPA----------------------------HEFEILACDWNKYD 204 (317)
Q Consensus 153 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~----------------------------~~~~v~~i~~~~~~ 204 (317)
.+++|+|+ ++++++++.||.|++||+++++....+.. |...|.+++|+
T Consensus 165 ~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--- 240 (366)
T 3k26_A 165 LSADYDLL-GEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--- 240 (366)
T ss_dssp EEEEECTT-SSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE---
T ss_pred eEEEECCC-CCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc---
Confidence 99999998 88999999999999999997755443332 88899999998
Q ss_pred CcEEEEEecCCcEEEEEccCCCc-------------cEEEEecCCCceeEEEecCC--CCeeEEeeecCCeEEEEecccc
Q 021121 205 DCLIASASVDKSIKIWDVRNYRV-------------PIAVLNGHGYAVRKVKFSPH--RRNLLASCSYDMTVCLWDFMVE 269 (317)
Q Consensus 205 ~~~l~~~~~d~~i~v~d~~~~~~-------------~~~~~~~~~~~v~~~~~~~~--~~~~l~~~~~d~~i~vwd~~~~ 269 (317)
++++++++.|+.|++||+++... .+..+..|...|++++|+|+ ++ +|++++.||.|++||+.++
T Consensus 241 ~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~-~l~~~~~dg~i~vwd~~~~ 319 (366)
T 3k26_A 241 GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQK-MLALGNQVGKLYVWDLEVE 319 (366)
T ss_dssp TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSS-EEEEECTTSCEEEEECCSS
T ss_pred CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCc-EEEEEecCCcEEEEECCCC
Confidence 56999999999999999987643 35667889999999999999 88 7999999999999999987
Q ss_pred cc---eeeeeecc--cceeEeEEEEeccCCeEEEeecCCcEEEEecC
Q 021121 270 DA---LVGRYDHH--TEFAVGVDMSVLVEGLLASTGWDELVYVWQQG 311 (317)
Q Consensus 270 ~~---~~~~~~~~--~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~ 311 (317)
+. ....+..| ...|++++|+|+ +.+|++++.||.|++||+.
T Consensus 320 ~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 320 DPHKAKCTTLTHHKCGAAIRQTSFSRD-SSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp SGGGCEEEEECCTTCCSCEEEEEECTT-SSEEEEEETTSEEEEEEC-
T ss_pred CCccccceEEcccccCCceEEEEeCCC-CCeEEEEeCCCEEEEEEec
Confidence 52 33466666 789999999998 8899999999999999985
No 26
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=3.1e-45 Score=303.06 Aligned_cols=296 Identities=16% Similarity=0.276 Sum_probs=241.8
Q ss_pred cCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCC--CCeEEEEEcCC
Q 021121 6 TPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESH--DSLLIAAVADG 83 (317)
Q Consensus 6 ~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~l~~~~~dg 83 (317)
|...|++++|+|+ ...++++++.. .+||.|++||+.... .......+|...|.+++|+|++ ..+|++|+.||
T Consensus 17 h~~~v~~~~~~p~-~~~l~~~~s~~---~~d~~v~iw~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg 90 (357)
T 3i2n_A 17 FNYTVFDCKWVPC-SAKFVTMGNFA---RGTGVIQLYEIQHGD--LKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGG 90 (357)
T ss_dssp CSSCEEEEEECTT-SSEEEEEEC-----CCCEEEEEEEECSSS--EEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTS
T ss_pred CCCceEEEEEcCC-CceEEEecCcc---CCCcEEEEEeCCCCc--ccceeeecccCcEEEEEEcCCCCCCceEEEecCCC
Confidence 7889999999995 33566555420 017899999998765 3444455789999999999983 36999999999
Q ss_pred eEEEEEeCCCCCCCCceeeccCCcceEEEEE------ecCCCCEEEEEcCCCEEEEEEcCCCc-eeEEeecccc----ce
Q 021121 84 SVKIYDTALPPTANPIRSLHEHTREVHSADY------NPTRRDSFITSSWDDTVKLWTVDRPT-SVRTFKEHAY----CV 152 (317)
Q Consensus 84 ~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~------~~~~~~~l~~~~~dg~v~iwd~~~~~-~~~~~~~~~~----~v 152 (317)
.|++||+...+ .....+..|...|.+++| +|++. +|++++.||.|++||+++++ ....+..+.+ .+
T Consensus 91 ~i~iwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~s~~~~-~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v 167 (357)
T 3i2n_A 91 NLHIWNLEAPE--MPVYSVKGHKEIINAIDGIGGLGIGEGAP-EIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDC 167 (357)
T ss_dssp CEEEECTTSCS--SCSEEECCCSSCEEEEEEESGGGCC-CCC-EEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCE
T ss_pred eEEEEeCCCCC--ccEEEEEecccceEEEeeccccccCCCcc-EEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCce
Confidence 99999998651 267788899999999965 57777 99999999999999999887 6777765554 79
Q ss_pred EEEE----EecCCCCeEEEEeCCCeEEEEeCCCCCceeeeccCccceEEEEecCC--CCcEEEEEecCCcEEEEEccCCC
Q 021121 153 YNAT----WNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKY--DDCLIASASVDKSIKIWDVRNYR 226 (317)
Q Consensus 153 ~~~~----~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~--~~~~l~~~~~d~~i~v~d~~~~~ 226 (317)
.+++ |+|+ +.++++++.||.|++||+++++.... ..|...+.+++|+|. ++.++++++.|+.|++||+++.+
T Consensus 168 ~~~~~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 245 (357)
T 3i2n_A 168 WTVAFGNAYNQE-ERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQH 245 (357)
T ss_dssp EEEEEECCCC-C-CCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEE
T ss_pred EEEEEEeccCCC-CCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCC
Confidence 9998 6677 89999999999999999998876444 557889999999985 67899999999999999998754
Q ss_pred ccEE-----EEecCCCceeEEEecCCCCeeEEeeecCCeEEEEeccccc------------------ceeeeeeccccee
Q 021121 227 VPIA-----VLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVED------------------ALVGRYDHHTEFA 283 (317)
Q Consensus 227 ~~~~-----~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~------------------~~~~~~~~~~~~v 283 (317)
. .. .+.+|...|++++|+|+++.+|++++.||.|++||++... ..+..+..|...|
T Consensus 246 ~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v 324 (357)
T 3i2n_A 246 P-TKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPI 324 (357)
T ss_dssp T-TTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCE
T ss_pred c-ccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCe
Confidence 3 22 2348999999999999998679999999999999998643 2456788899999
Q ss_pred EeEEEEeccCCeEE-EeecCCcEEEEecCCCC
Q 021121 284 VGVDMSVLVEGLLA-STGWDELVYVWQQGMDP 314 (317)
Q Consensus 284 ~~~~~~~~~~~~l~-s~~~dg~i~~w~~~~~~ 314 (317)
++++|+|+ +.+|+ +++.||.|++|++....
T Consensus 325 ~~~~~s~~-~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 325 SSLDWSPD-KRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp EEEEECSS-STTEEEEEETTSEEEEEEECC--
T ss_pred eEEEEcCC-CCeEEEEecCCCcEEEEECCCcc
Confidence 99999999 66666 89999999999998643
No 27
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=2.6e-44 Score=295.61 Aligned_cols=292 Identities=18% Similarity=0.259 Sum_probs=239.7
Q ss_pred cCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcce--eeeeecCCCCeeEEEecCCCCCeEEEEEcCC
Q 021121 6 TPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALT--ELVAFDTADGVYDLAWSESHDSLLIAAVADG 83 (317)
Q Consensus 6 ~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 83 (317)
|...|++|+|+|+ .+.++++++. ||.|+|||+........ .....+|...|.+++|+|++ .+|++|+.|+
T Consensus 37 H~~~V~~v~~sp~-~~~~l~S~s~------D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg-~~l~s~~~d~ 108 (340)
T 4aow_A 37 HNGWVTQIATTPQ-FPDMILSASR------DKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDG-QFALSGSWDG 108 (340)
T ss_dssp CSSCEEEEEECTT-CTTEEEEEET------TSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTS-SEEEEEETTS
T ss_pred ccCCEEEEEEeCC-CCCEEEEEcC------CCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCC-CEEEEEcccc
Confidence 8899999999995 3456666665 99999999987653221 22233688999999999998 6999999999
Q ss_pred eEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCcee-EEeeccccceEEEEEecCCC
Q 021121 84 SVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSV-RTFKEHAYCVYNATWNPRHS 162 (317)
Q Consensus 84 ~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~-~~~~~~~~~v~~~~~~~~~~ 162 (317)
.|++|+.... ........+...+..+.+++++. .+++++.|+.+++||+...... .....|...+..++|+++..
T Consensus 109 ~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 184 (340)
T 4aow_A 109 TLRLWDLTTG---TTTRRFVGHTKDVLSVAFSSDNR-QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSS 184 (340)
T ss_dssp EEEEEETTTT---EEEEEEECCSSCEEEEEECTTSS-CEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSS
T ss_pred cceEEeeccc---ceeeeecCCCCceeEEEEeecCc-cceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCC
Confidence 9999998765 55566667888899999999987 8999999999999998766443 33456888999999998743
Q ss_pred -CeEEEEeCCCeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEecCCCceeE
Q 021121 163 -DVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRK 241 (317)
Q Consensus 163 -~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~v~~ 241 (317)
.++++++.|+.|++||+++++....+.+|..+|.+++|+| ++++|++++.|+.|++||+++.+. +..+.. ...|.+
T Consensus 185 ~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~Dg~i~iwd~~~~~~-~~~~~~-~~~v~~ 261 (340)
T 4aow_A 185 NPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP-DGSLCASGGKDGQAMLWDLNEGKH-LYTLDG-GDIINA 261 (340)
T ss_dssp SCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTCEEEEEETTTTEE-EEEEEC-SSCEEE
T ss_pred CcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECC-CCCEEEEEeCCCeEEEEEeccCce-eeeecC-CceEEe
Confidence 4678899999999999999999999999999999999999 999999999999999999998653 556654 458999
Q ss_pred EEecCCCCeeEEeeecCCeEEEEecccccce--------eeeeecccceeEeEEEEeccCCeEEEeecCCcEEEEecCCC
Q 021121 242 VKFSPHRRNLLASCSYDMTVCLWDFMVEDAL--------VGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGMD 313 (317)
Q Consensus 242 ~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~--------~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~ 313 (317)
++|+|++. +++++.|+.|++||+++.... ......|...|++++|+|+ +++|++|+.||.|++||+.++
T Consensus 262 ~~~~~~~~--~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~d-g~~l~sgs~Dg~v~iW~~~tG 338 (340)
T 4aow_A 262 LCFSPNRY--WLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSAD-GQTLFAGYTDNLVRVWQVTIG 338 (340)
T ss_dssp EEECSSSS--EEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTT-SSEEEEEETTSCEEEEEEEC-
T ss_pred eecCCCCc--eeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCC-CCEEEEEeCCCEEEEEeCCCc
Confidence 99999875 566778999999999876421 1223468889999999999 889999999999999999886
Q ss_pred CC
Q 021121 314 PR 315 (317)
Q Consensus 314 ~~ 315 (317)
.|
T Consensus 339 tr 340 (340)
T 4aow_A 339 TR 340 (340)
T ss_dssp --
T ss_pred CC
Confidence 54
No 28
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.4e-44 Score=303.52 Aligned_cols=287 Identities=12% Similarity=0.163 Sum_probs=243.8
Q ss_pred ecCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCC--c-ceeeeeecCCCCeeEEEecCC----C---CC
Q 021121 5 KTPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAP--A-LTELVAFDTADGVYDLAWSES----H---DS 74 (317)
Q Consensus 5 ~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~--~-~~~~~~~~~~~~v~~~~~~~~----~---~~ 74 (317)
.|...|++++|+| ..+++++. ||.|++|++..... . ........|...|.+++|+|+ + .
T Consensus 14 ~h~~~i~~~~~~~---~~l~s~~~-------dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~- 82 (397)
T 1sq9_A 14 AHDADIFSVSACN---SFTVSCSG-------DGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELC- 82 (397)
T ss_dssp CSSSCEEEEEECS---SEEEEEET-------TSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEE-
T ss_pred hhhcCeEEEEecC---CeEEEEcC-------CCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCcccc-
Confidence 3788999999998 45555544 99999999987651 0 112233378899999999998 5 4
Q ss_pred eEEEEEcCCeEEEEEeCCCCCCCC-----ceeeccC-----CcceEEEEEe----cCCCCE-EEEEcCCCEEEEEEcCC-
Q 021121 75 LLIAAVADGSVKIYDTALPPTANP-----IRSLHEH-----TREVHSADYN----PTRRDS-FITSSWDDTVKLWTVDR- 138 (317)
Q Consensus 75 ~l~~~~~dg~i~v~~~~~~~~~~~-----~~~~~~~-----~~~v~~~~~~----~~~~~~-l~~~~~dg~v~iwd~~~- 138 (317)
+|++++.||.|++|++... .. ...+..| ...|.+++|+ |++. + |++++.||.|++||+++
T Consensus 83 ~l~s~~~dg~i~iw~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~ 158 (397)
T 1sq9_A 83 LVATTSFSGDLLFYRITRE---DETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLS-HRLVATDVKGTTYIWKFHPF 158 (397)
T ss_dssp EEEEEETTSCEEEEEEEEC---TTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----C-EEEEEEETTSCEEEEEEESS
T ss_pred EEEEEcCCCCEEEEEccCC---cccccccceeecccccccCCCcEEEEEEeeccCCCCc-eEEEEEeCCCcEEEEeCCcc
Confidence 8999999999999999876 33 6667777 5999999999 9988 8 99999999999999998
Q ss_pred -----CceeE-----Eee-------ccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeecc---C---ccce
Q 021121 139 -----PTSVR-----TFK-------EHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPA---H---EFEI 195 (317)
Q Consensus 139 -----~~~~~-----~~~-------~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---~---~~~v 195 (317)
++.+. .+. .|...+.+++|+|+ + ++++++.||.|++||+++++.+..+.. | ...+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i 236 (397)
T 1sq9_A 159 ADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISER-G-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSI 236 (397)
T ss_dssp SSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTT-S-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCE
T ss_pred ccccccceeeccCcceeeeeeccccCCCCCceEEEECCC-c-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCcc
Confidence 66666 663 47889999999999 6 999999999999999999998888888 8 8999
Q ss_pred EEEEecCCCCcEEEEEecC---CcEEEEEccCCCccEEEEec-------------CCCceeEEEecCCCCeeEEeeecCC
Q 021121 196 LACDWNKYDDCLIASASVD---KSIKIWDVRNYRVPIAVLNG-------------HGYAVRKVKFSPHRRNLLASCSYDM 259 (317)
Q Consensus 196 ~~i~~~~~~~~~l~~~~~d---~~i~v~d~~~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~~l~~~~~d~ 259 (317)
.+++|+| ++++|++++.| +.|++||+++.+ ++..+.. |...|.+++|+|+++ +|++++.||
T Consensus 237 ~~i~~~~-~~~~l~~~~~d~~~g~i~i~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg 313 (397)
T 1sq9_A 237 RSVKFSP-QGSLLAIAHDSNSFGCITLYETEFGE-RIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGE-TLCSAGWDG 313 (397)
T ss_dssp EEEEECS-STTEEEEEEEETTEEEEEEEETTTCC-EEEEECBC--------CCBSBSSCEEEEEECSSSS-EEEEEETTS
T ss_pred ceEEECC-CCCEEEEEecCCCCceEEEEECCCCc-ccceeccCcccccccccccccCCcEEEEEECCCCC-EEEEEeCCC
Confidence 9999999 89999999999 999999999866 4777777 999999999999998 799999999
Q ss_pred eEEEEecccccceeeeee------cc---------------cceeEeEEEEeccC----------CeEEEeecCCcEEEE
Q 021121 260 TVCLWDFMVEDALVGRYD------HH---------------TEFAVGVDMSVLVE----------GLLASTGWDELVYVW 308 (317)
Q Consensus 260 ~i~vwd~~~~~~~~~~~~------~~---------------~~~v~~~~~~~~~~----------~~l~s~~~dg~i~~w 308 (317)
.|++||+++++ .+..+. .| ...|++++|+|+ + .+|++++.||.|++|
T Consensus 314 ~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~-g~~~~~~~~~~~~l~s~~~dg~i~iw 391 (397)
T 1sq9_A 314 KLRFWDVKTKE-RITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKK-GWRSGMGADLNESLCCVCLDRSIRWF 391 (397)
T ss_dssp EEEEEETTTTE-EEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECT-TTSBSTTCTTSCEEEEEETTTEEEEE
T ss_pred eEEEEEcCCCc-eeEEEecccCcccchhhhhccccccccccCCceeEEEeccc-cccccccccccceEEEecCCCcEEEE
Confidence 99999999886 556677 67 899999999998 4 799999999999999
Q ss_pred ecCCC
Q 021121 309 QQGMD 313 (317)
Q Consensus 309 ~~~~~ 313 (317)
++..+
T Consensus 392 ~~~~g 396 (397)
T 1sq9_A 392 REAGG 396 (397)
T ss_dssp EEEC-
T ss_pred EcCCC
Confidence 99764
No 29
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=8e-45 Score=302.29 Aligned_cols=290 Identities=14% Similarity=0.163 Sum_probs=241.3
Q ss_pred cCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeee-ecCCCCeeEEEecCCCCCeEEEEEcCCe
Q 021121 6 TPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVA-FDTADGVYDLAWSESHDSLLIAAVADGS 84 (317)
Q Consensus 6 ~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 84 (317)
+..+|++++|+| ++.++++++. +|.|++||+.... ...+.. ..|...|.+++|+|++ .+|++++.||.
T Consensus 7 ~~~~i~~~~~s~--~~~~l~~~~~------d~~v~i~~~~~~~--~~~~~~~~~h~~~v~~~~~~~~~-~~l~~~~~dg~ 75 (372)
T 1k8k_C 7 LVEPISCHAWNK--DRTQIAICPN------NHEVHIYEKSGNK--WVQVHELKEHNGQVTGVDWAPDS-NRIVTCGTDRN 75 (372)
T ss_dssp CSSCCCEEEECT--TSSEEEEECS------SSEEEEEEEETTE--EEEEEEEECCSSCEEEEEEETTT-TEEEEEETTSC
T ss_pred cCCCeEEEEECC--CCCEEEEEeC------CCEEEEEeCCCCc--EEeeeeecCCCCcccEEEEeCCC-CEEEEEcCCCe
Confidence 678999999999 5667777665 8999999998753 112222 3688999999999997 69999999999
Q ss_pred EEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCce---eEE-eeccccceEEEEEecC
Q 021121 85 VKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTS---VRT-FKEHAYCVYNATWNPR 160 (317)
Q Consensus 85 i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~---~~~-~~~~~~~v~~~~~~~~ 160 (317)
|++||+... .......+..|...|.+++|+|++. ++++++.||.|++||++.++. ... ...|...|.+++|+|+
T Consensus 76 i~vwd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 153 (372)
T 1k8k_C 76 AYVWTLKGR-TWKPTLVILRINRAARCVRWAPNEK-KFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPN 153 (372)
T ss_dssp EEEEEEETT-EEEEEEECCCCSSCEEEEEECTTSS-EEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTT
T ss_pred EEEEECCCC-eeeeeEEeecCCCceeEEEECCCCC-EEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCC
Confidence 999999764 1122333467899999999999987 999999999999999998763 233 3567889999999998
Q ss_pred CCCeEEEEeCCCeEEEEeCC------------------CCCceeeeccCccceEEEEecCCCCcEEEEEecCCcEEEEEc
Q 021121 161 HSDVFCSASGDCTLRIWDVR------------------EMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222 (317)
Q Consensus 161 ~~~~l~~~~~dg~i~i~d~~------------------~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~ 222 (317)
++++++++.||.|++||++ .++.+..+..|...+.+++|+| ++++|++++.|+.|++||+
T Consensus 154 -~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~ 231 (372)
T 1k8k_C 154 -SVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSA-NGSRVAWVSHDSTVCLADA 231 (372)
T ss_dssp -SSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECS-SSSEEEEEETTTEEEEEEG
T ss_pred -CCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECC-CCCEEEEEeCCCEEEEEEC
Confidence 8899999999999999954 5677778888999999999999 9999999999999999999
Q ss_pred cCCCccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEeccc--cc------------------------------
Q 021121 223 RNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMV--ED------------------------------ 270 (317)
Q Consensus 223 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~--~~------------------------------ 270 (317)
++.+ ++..+..|..+|.+++|+|++. +|+++ .|+.|++|++.+ ++
T Consensus 232 ~~~~-~~~~~~~~~~~v~~~~~~~~~~-~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (372)
T 1k8k_C 232 DKKM-AVATLASETLPLLAVTFITESS-LVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKK 308 (372)
T ss_dssp GGTT-EEEEEECSSCCEEEEEEEETTE-EEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCC
T ss_pred CCCc-eeEEEccCCCCeEEEEEecCCC-EEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccc
Confidence 9876 4788889999999999999997 67776 899999999987 31
Q ss_pred -ce-------eeeeecccceeEeEEEEeccC---CeEEEeecCCcEEEEecCCC
Q 021121 271 -AL-------VGRYDHHTEFAVGVDMSVLVE---GLLASTGWDELVYVWQQGMD 313 (317)
Q Consensus 271 -~~-------~~~~~~~~~~v~~~~~~~~~~---~~l~s~~~dg~i~~w~~~~~ 313 (317)
.. .....+|...|++++|.+..+ .+|++++.||.|++|++...
T Consensus 309 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~ 362 (372)
T 1k8k_C 309 ASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSL 362 (372)
T ss_dssp C---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHH
T ss_pred cccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecCh
Confidence 00 122248999999999886645 89999999999999998653
No 30
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.7e-45 Score=312.73 Aligned_cols=292 Identities=16% Similarity=0.192 Sum_probs=226.0
Q ss_pred cCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeE
Q 021121 6 TPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSV 85 (317)
Q Consensus 6 ~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 85 (317)
+...|++|+|+|..+ .++++++. ||.|+|||+..... ...+...+|.+.|++|+|+|.+..+|++|+.||+|
T Consensus 118 ~~~~V~~l~~~P~~~-~~lasGs~------dg~i~lWd~~~~~~-~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v 189 (435)
T 4e54_B 118 FDRRATSLAWHPTHP-STVAVGSK------GGDIMLWNFGIKDK-PTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTT 189 (435)
T ss_dssp CSSCEEEEEECSSCT-TCEEEEET------TSCEEEECSSCCSC-CEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCE
T ss_pred CCCCEEEEEEeCCCC-CEEEEEeC------CCEEEEEECCCCCc-eeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEE
Confidence 567799999999644 44555554 99999999986652 22334447999999999999655799999999999
Q ss_pred EEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeeccccceEEEEEecCCCCeE
Q 021121 86 KIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVF 165 (317)
Q Consensus 86 ~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 165 (317)
++||++.. ..........+...+.+++|+|++. +|++|+.||.|++||++ ++.+..+..|...|.+++|+|++..++
T Consensus 190 ~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~ 266 (435)
T 4e54_B 190 RLQDFKGN-ILRVFASSDTINIWFCSLDVSASSR-MVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFL 266 (435)
T ss_dssp EEEETTSC-EEEEEECCSSCSCCCCCEEEETTTT-EEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEE
T ss_pred EEeeccCC-ceeEEeccCCCCccEEEEEECCCCC-EEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEE
Confidence 99998753 1111122223455688999999998 99999999999999986 456677889999999999999967789
Q ss_pred EEEeCCCeEEEEeCCCCCceee---eccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEecCCC-----
Q 021121 166 CSASGDCTLRIWDVREMGSTMI---IPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGY----- 237 (317)
Q Consensus 166 ~~~~~dg~i~i~d~~~~~~~~~---~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~----- 237 (317)
++++.|+.|++||+++.+.... ..+|..+|++++|+| ++++|++++.|+.|++||+++... ...+..|..
T Consensus 267 ~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~sp-dg~~l~s~~~D~~i~iwd~~~~~~-~~~~~~~~~~~~~~ 344 (435)
T 4e54_B 267 ATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSP-DGARLLTTDQKSEIRVYSASQWDC-PLGLIPHPHRHFQH 344 (435)
T ss_dssp EEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCT-TSSEEEEEESSSCEEEEESSSSSS-EEEECCCCCCCCSS
T ss_pred EEecCcceeeEEecccccccceEEEeeeccccccceeECC-CCCeeEEEcCCCEEEEEECCCCcc-ceEEeccccccccc
Confidence 9999999999999998765433 356889999999999 999999999999999999998765 444444432
Q ss_pred -ceeEEEecCCCCeeEEeee------------cCCeEEEEecccccceeeeeecccceeEeE-EEEeccCCeEEEeecCC
Q 021121 238 -AVRKVKFSPHRRNLLASCS------------YDMTVCLWDFMVEDALVGRYDHHTEFAVGV-DMSVLVEGLLASTGWDE 303 (317)
Q Consensus 238 -~v~~~~~~~~~~~~l~~~~------------~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~l~s~~~dg 303 (317)
.+....|+|++. ++++++ .++.|++||..+++.+.....+|...|.++ +|+|+ +.+|++|+ |+
T Consensus 345 ~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspd-g~~lasg~-d~ 421 (435)
T 4e54_B 345 LTPIKAAWHPRYN-LIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPM-GDTLASAM-GY 421 (435)
T ss_dssp SCCCBCEECSSSS-CEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTT-SSCEEEEC-SS
T ss_pred ceeEEEEEcCCCC-EEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCC-CCEEEEEc-CC
Confidence 233456666665 344332 346799999999875545556788889988 69998 78888876 88
Q ss_pred cEEEEecCCC
Q 021121 304 LVYVWQQGMD 313 (317)
Q Consensus 304 ~i~~w~~~~~ 313 (317)
.|+||++...
T Consensus 422 ~i~iW~~~~g 431 (435)
T 4e54_B 422 HILIWSQQEA 431 (435)
T ss_dssp EEEECCCC--
T ss_pred cEEEEECCcC
Confidence 9999999875
No 31
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=7.9e-44 Score=319.17 Aligned_cols=287 Identities=19% Similarity=0.288 Sum_probs=236.6
Q ss_pred cCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcc--eeeeeecCCCCeeEEEecCCCCCeEEEEEcCC
Q 021121 6 TPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPAL--TELVAFDTADGVYDLAWSESHDSLLIAAVADG 83 (317)
Q Consensus 6 ~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 83 (317)
|...|++++|+|+ +..++++++. ||.|++|++....... .......|...|.+++|+|++ .+|++|+.||
T Consensus 381 H~~~V~~v~~~~~-~~~~l~s~s~------D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g-~~l~sgs~Dg 452 (694)
T 3dm0_A 381 HTDMVTAIATPID-NADIIVSASR------DKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDG-QFALSGSWDG 452 (694)
T ss_dssp CSSCEEEEECCTT-CCSEEEEEET------TSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTS-SEEEEEETTS
T ss_pred CCceeEEEEecCC-CCCEEEEEeC------CCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCC-CEEEEEeCCC
Confidence 8899999999996 3455555554 9999999998654322 122344799999999999998 6999999999
Q ss_pred eEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEe---eccccceEEEEEecC
Q 021121 84 SVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTF---KEHAYCVYNATWNPR 160 (317)
Q Consensus 84 ~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~---~~~~~~v~~~~~~~~ 160 (317)
.|++||+..+ .....+.+|...|.+++|+|++. +|++++.|++|++||.......... .+|...|.+++|+|+
T Consensus 453 ~v~vwd~~~~---~~~~~~~~h~~~v~~~~~s~~~~-~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 528 (694)
T 3dm0_A 453 ELRLWDLAAG---VSTRRFVGHTKDVLSVAFSLDNR-QIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPN 528 (694)
T ss_dssp EEEEEETTTT---EEEEEEECCSSCEEEEEECTTSS-CEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSC
T ss_pred cEEEEECCCC---cceeEEeCCCCCEEEEEEeCCCC-EEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCC
Confidence 9999999866 67778889999999999999998 8999999999999998654333222 357888999999998
Q ss_pred C-CCeEEEEeCCCeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEecCCCce
Q 021121 161 H-SDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAV 239 (317)
Q Consensus 161 ~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~v 239 (317)
+ ...+++++.|+.|++||+++.+....+.+|...|.+++|+| ++++|++++.|+.|++||+++++. +..+. +...|
T Consensus 529 ~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~sp-dg~~l~sg~~Dg~i~iwd~~~~~~-~~~~~-~~~~v 605 (694)
T 3dm0_A 529 TLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSP-DGSLCASGGKDGVVLLWDLAEGKK-LYSLE-ANSVI 605 (694)
T ss_dssp SSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSBCEEEETTTTEE-EECCB-CSSCE
T ss_pred CCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeC-CCCEEEEEeCCCeEEEEECCCCce-EEEec-CCCcE
Confidence 4 25899999999999999999999999999999999999999 999999999999999999998763 44444 45689
Q ss_pred eEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeecc-------------------cceeEeEEEEeccCCeEEEee
Q 021121 240 RKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHH-------------------TEFAVGVDMSVLVEGLLASTG 300 (317)
Q Consensus 240 ~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~-------------------~~~v~~~~~~~~~~~~l~s~~ 300 (317)
.+++|+|++. +|+++ .++.|++||+++++ ++..+..+ ...+++++|+|+ +.+|++|+
T Consensus 606 ~~~~~sp~~~-~l~~~-~~~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spd-g~~l~sgs 681 (694)
T 3dm0_A 606 HALCFSPNRY-WLCAA-TEHGIKIWDLESKS-IVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSAD-GSTLFSGY 681 (694)
T ss_dssp EEEEECSSSS-EEEEE-ETTEEEEEETTTTE-EEEEECCCCC----------------CCCCEEEEEECTT-SSEEEEEE
T ss_pred EEEEEcCCCc-EEEEE-cCCCEEEEECCCCC-ChhhhccccccccccccccccccCCceeEEeeeEEEcCC-CCEEEEEc
Confidence 9999999986 55554 57779999998876 33333211 123789999999 89999999
Q ss_pred cCCcEEEEecC
Q 021121 301 WDELVYVWQQG 311 (317)
Q Consensus 301 ~dg~i~~w~~~ 311 (317)
.||.|++|++.
T Consensus 682 ~Dg~i~iW~i~ 692 (694)
T 3dm0_A 682 TDGVIRVWGIG 692 (694)
T ss_dssp TTSEEEEEEC-
T ss_pred CCCeEEEEecc
Confidence 99999999986
No 32
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=6.4e-45 Score=307.86 Aligned_cols=283 Identities=16% Similarity=0.183 Sum_probs=235.4
Q ss_pred eeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeEEEEE
Q 021121 10 GYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYD 89 (317)
Q Consensus 10 v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~ 89 (317)
+++++|+|+ +.++++++. ||.|++||+....... .......+....|+|++ .+|++|+.||.|++||
T Consensus 59 ~~~~~~s~~--g~~l~~~~~------d~~v~i~d~~~~~~~~----~~~~~~~~~~~~~~~~~-~~l~~~~~dg~i~iwd 125 (420)
T 3vl1_A 59 GKGNTFEKV--GSHLYKARL------DGHDFLFNTIIRDGSK----MLKRADYTAVDTAKLQM-RRFILGTTEGDIKVLD 125 (420)
T ss_dssp CTTCEEEEE--ETTEEEEEE------TTEEEEEECCSEETTT----TSCSCCEEEEEEECSSS-CEEEEEETTSCEEEEC
T ss_pred ccceeeeec--CCeEEEEEc------CCcEEEEEecccceee----EEecCCceEEEEEecCC-CEEEEEECCCCEEEEe
Confidence 457999994 555555554 8999999987654211 11222445555788887 6999999999999999
Q ss_pred eCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeeccccceEEEEEecCCCCeEEEEe
Q 021121 90 TALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSAS 169 (317)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 169 (317)
+..+ .....+..|...|.+++|+|++. +|++++.|+.|++||+++++.+..+..|...|.+++|+|+ +.+|++++
T Consensus 126 ~~~~---~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~ 200 (420)
T 3vl1_A 126 SNFN---LQREIDQAHVSEITKLKFFPSGE-ALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDR-GRNVLSAS 200 (420)
T ss_dssp TTSC---EEEEETTSSSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETT-TTEEEEEE
T ss_pred CCCc---ceeeecccccCccEEEEECCCCC-EEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCC-CCEEEEEc
Confidence 8765 56666789999999999999988 9999999999999999999999999999999999999998 89999999
Q ss_pred CCCeEEEEeCCCCCceeeeccC------------------------ccceEEEEecCCCCcEEEEEecCCcEEEEEccCC
Q 021121 170 GDCTLRIWDVREMGSTMIIPAH------------------------EFEILACDWNKYDDCLIASASVDKSIKIWDVRNY 225 (317)
Q Consensus 170 ~dg~i~i~d~~~~~~~~~~~~~------------------------~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~ 225 (317)
.||.|++||+++++.+..+..+ ...+.+++|+| +++++++++.||.|++||+++.
T Consensus 201 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~i~d~~~~ 279 (420)
T 3vl1_A 201 LDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGT-YGKYVIAGHVSGVITVHNVFSK 279 (420)
T ss_dssp TTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSC-TTEEEEEEETTSCEEEEETTTC
T ss_pred CCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcC-CCCEEEEEcCCCeEEEEECCCC
Confidence 9999999999999888777642 24455566788 8999999999999999999988
Q ss_pred CccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeec-ccceeEeEEEEeccCCeEEEeecCCc
Q 021121 226 RVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDH-HTEFAVGVDMSVLVEGLLASTGWDEL 304 (317)
Q Consensus 226 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~s~~~dg~ 304 (317)
+........|...|++++|+|+++.+|++++.||.|++||+++++.++..+.. |...|..+.+ ++ +.+|++++.||.
T Consensus 280 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~-~~~l~s~~~d~~ 357 (420)
T 3vl1_A 280 EQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AA-GALFVSSGFDTS 357 (420)
T ss_dssp CEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ET-TEEEEEETTTEE
T ss_pred ceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CC-CCEEEEecCCcc
Confidence 76555556688999999999999867999999999999999988765566665 6777888855 55 679999999999
Q ss_pred EEEEecCCC
Q 021121 305 VYVWQQGMD 313 (317)
Q Consensus 305 i~~w~~~~~ 313 (317)
|++|++...
T Consensus 358 v~iw~~~~~ 366 (420)
T 3vl1_A 358 IKLDIISDP 366 (420)
T ss_dssp EEEEEECCT
T ss_pred EEEEeccCC
Confidence 999999763
No 33
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.1e-45 Score=312.17 Aligned_cols=305 Identities=10% Similarity=0.080 Sum_probs=233.3
Q ss_pred ceecCcceeEEEEecCCCC-------eEEEEEecc-------------cccccCceEEEEecCCCCCcceeee-eecCCC
Q 021121 3 VFKTPFNGYSVKFSPFYES-------RLAVATAQN-------------FGILGNGRVHVLDLSPAAPALTELV-AFDTAD 61 (317)
Q Consensus 3 ~~~~~~~v~~~~~~p~~~~-------~~~~~~~~~-------------~~~~~~g~i~i~~~~~~~~~~~~~~-~~~~~~ 61 (317)
.+.....|++|+|+|+..+ .+++++... .....|+.|+||++........... ...|.+
T Consensus 129 ~~~~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~ 208 (524)
T 2j04_B 129 IYNVGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFG 208 (524)
T ss_dssp EEECCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCC
T ss_pred EEECCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCC
Confidence 3556889999999996411 444443321 1123589999999977553222122 235678
Q ss_pred CeeEEEecCCC-----CCeEEEEEcCCeEEEEEeCCCCCC--------CCceeeccCCcceEEEEEecCCCCEEEEEcCC
Q 021121 62 GVYDLAWSESH-----DSLLIAAVADGSVKIYDTALPPTA--------NPIRSLHEHTREVHSADYNPTRRDSFITSSWD 128 (317)
Q Consensus 62 ~v~~~~~~~~~-----~~~l~~~~~dg~i~v~~~~~~~~~--------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 128 (317)
.|.+++|+|++ ..+||+++.||+|++||+..+... .+...+.+|...|++++|++++ .|++|+.|
T Consensus 209 ~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~--~lasgs~D 286 (524)
T 2j04_B 209 EVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT--TVVCGFKN 286 (524)
T ss_dssp SEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS--EEEEEETT
T ss_pred cEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC--eEEEEeCC
Confidence 89999999972 259999999999999999765221 2334677899999999999863 79999999
Q ss_pred CEEEEEEcCCCc-eeEEeeccccceEEE--EEecCCC-CeEEEEeCCCeEEEEeCCCCCceeeeccCcc--ceEEEEecC
Q 021121 129 DTVKLWTVDRPT-SVRTFKEHAYCVYNA--TWNPRHS-DVFCSASGDCTLRIWDVREMGSTMIIPAHEF--EILACDWNK 202 (317)
Q Consensus 129 g~v~iwd~~~~~-~~~~~~~~~~~v~~~--~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~--~v~~i~~~~ 202 (317)
|+|++||++++. ....+..|...|.++ .|+|+ + .+|++++.|++|++||+++++....+.+|.. .+.+++|+|
T Consensus 287 gtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~-g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp 365 (524)
T 2j04_B 287 GFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDF-EDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCP 365 (524)
T ss_dssp SEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTT-SCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEET
T ss_pred CEEEEEECCCCCCceEEeecccccEEEEEEEcCCC-CCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCC
Confidence 999999999764 455688999999999 46676 5 8999999999999999998877766665543 478999999
Q ss_pred CCCcEEEEEecCCcEEEEEccCCCccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEeccccc------------
Q 021121 203 YDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVED------------ 270 (317)
Q Consensus 203 ~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~------------ 270 (317)
+++.+++++.|++|++||+++... +..+.+|...|++++|+|+++ +|++|+.||+|++||+....
T Consensus 366 -~~~~l~s~~~d~tv~lwd~~~~~~-~~~l~gH~~~V~sva~Sp~g~-~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~ 442 (524)
T 2j04_B 366 -QIYSYIYSDGASSLRAVPSRAAFA-VHPLVSRETTITAIGVSRLHP-MVLAGSADGSLIITNAARRLLHGIKNSSATQK 442 (524)
T ss_dssp -TTTEEEEECSSSEEEEEETTCTTC-CEEEEECSSCEEEEECCSSCC-BCEEEETTTEEECCBSCSSTTTCC------CC
T ss_pred -CcCeEEEeCCCCcEEEEECccccc-ceeeecCCCceEEEEeCCCCC-eEEEEECCCEEEEEechHhhccccccCcccee
Confidence 888999999999999999998764 567778999999999999998 79999999999999853210
Q ss_pred -------------------------------ceeeeeecccceeEeEEEEecc--CCeEEEeecCCcEEEEecCCC
Q 021121 271 -------------------------------ALVGRYDHHTEFAVGVDMSVLV--EGLLASTGWDELVYVWQQGMD 313 (317)
Q Consensus 271 -------------------------------~~~~~~~~~~~~v~~~~~~~~~--~~~l~s~~~dg~i~~w~~~~~ 313 (317)
.....+.+|...|.+++|+|++ +..+++|+.||.|+||++..+
T Consensus 443 ~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 443 SLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSLE 518 (524)
T ss_dssp CCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSCC
T ss_pred eeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEcccc
Confidence 0122344678899999999984 248999999999999999865
No 34
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=5.7e-44 Score=298.54 Aligned_cols=285 Identities=16% Similarity=0.192 Sum_probs=229.2
Q ss_pred cCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeE
Q 021121 6 TPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSV 85 (317)
Q Consensus 6 ~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 85 (317)
|...|++++|+|+++ .++++++. ||.|++||+..... ...+....|...|.+++|+|++..+|++++.|+.|
T Consensus 72 h~~~v~~~~~~~~~~-~~l~s~~~------dg~i~iwd~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i 143 (383)
T 3ei3_B 72 FDRRVTSLEWHPTHP-TTVAVGSK------GGDIILWDYDVQNK-TSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGAT 143 (383)
T ss_dssp CSSCEEEEEECSSCT-TEEEEEEB------TSCEEEEETTSTTC-EEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEE
T ss_pred CCCCEEEEEECCCCC-CEEEEEcC------CCeEEEEeCCCccc-ceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEE
Confidence 678999999999522 55555554 99999999987652 22222236899999999999544799999999999
Q ss_pred EEEEeCCCCCCCCceee---ccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeeccccceEEEEEecCCC
Q 021121 86 KIYDTALPPTANPIRSL---HEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHS 162 (317)
Q Consensus 86 ~v~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 162 (317)
++||+.. .....+ ..|...|.+++|+|++. +|++++.||.|++||+ +++.+..+..|...|.+++|+|++.
T Consensus 144 ~iwd~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~ 217 (383)
T 3ei3_B 144 TLRDFSG----SVIQVFAKTDSWDYWYCCVDVSVSRQ-MLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCD 217 (383)
T ss_dssp EEEETTS----CEEEEEECCCCSSCCEEEEEEETTTT-EEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCT
T ss_pred EEEECCC----CceEEEeccCCCCCCeEEEEECCCCC-EEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCC
Confidence 9999974 233333 34558899999999998 9999999999999999 5778888999999999999999944
Q ss_pred CeEEEEeCCCeEEEEeCCC----CCceeeeccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEecCC--
Q 021121 163 DVFCSASGDCTLRIWDVRE----MGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHG-- 236 (317)
Q Consensus 163 ~~l~~~~~dg~i~i~d~~~----~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~-- 236 (317)
.++++++.|+.|++||+++ +..+..+ .|...+.+++|+|.++++|++++.|+.|++||+++.+. ...+..|.
T Consensus 218 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~-~~~~~~~~~~ 295 (383)
T 3ei3_B 218 WLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSK-PDQIIIHPHR 295 (383)
T ss_dssp TEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTS-CSEEEECCBC
T ss_pred CEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcc-cccccccccc
Confidence 4999999999999999998 4455555 68999999999987788999999999999999998764 33443332
Q ss_pred ---------------CceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeec--ccceeEeEEEEeccCCeEEEe
Q 021121 237 ---------------YAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDH--HTEFAVGVDMSVLVEGLLAST 299 (317)
Q Consensus 237 ---------------~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~s~ 299 (317)
..+..++|+|+++ + +++.|+.|++||+.+++ .+..+.+ |...+..++|+|+ +.+|+++
T Consensus 296 ~~~~~~~~~~~~~p~~~~~~~~~s~dg~-~--s~s~d~~i~iwd~~~~~-~~~~l~~~~~~~~~~~~~~s~~-g~~l~s~ 370 (383)
T 3ei3_B 296 QFQHLTPIKATWHPMYDLIVAGRYPDDQ-L--LLNDKRTIDIYDANSGG-LVHQLRDPNAAGIISLNKFSPT-GDVLASG 370 (383)
T ss_dssp CCTTSCCCCCEECSSSSEEEEECBCCTT-T--CTTCCCCEEEEETTTCC-EEEEECBTTBCSCCCEEEECTT-SSEEEEE
T ss_pred ccccccceEEeccCCCCceEEEecCCcc-c--ccCCCCeEEEEecCCCc-eeeeecCCCCCceEEEEEEecC-ccEEEEe
Confidence 2344467777776 3 77899999999999887 4566665 4567777899999 7899999
Q ss_pred ecCCcEEEEecCC
Q 021121 300 GWDELVYVWQQGM 312 (317)
Q Consensus 300 ~~dg~i~~w~~~~ 312 (317)
+ ||.|++|+++.
T Consensus 371 s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 371 M-GFNILIWNRED 382 (383)
T ss_dssp E-TTEEEEEECC-
T ss_pred c-CCcEEEEecCC
Confidence 7 99999999875
No 35
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.8e-43 Score=285.26 Aligned_cols=253 Identities=22% Similarity=0.363 Sum_probs=214.2
Q ss_pred ecCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecC--CCCEEEEEcCCCEEEEE
Q 021121 57 FDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPT--RRDSFITSSWDDTVKLW 134 (317)
Q Consensus 57 ~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~l~~~~~dg~v~iw 134 (317)
.+|...|++++|+|++ .+|++|+.|++|++|++... ..+.+..+.+|.++|.+++|+++ +. +|++|+.|++|++|
T Consensus 6 ~~h~~~V~~~~~s~~g-~~las~s~D~~v~iw~~~~~-~~~~~~~l~gH~~~V~~v~~s~~~~g~-~l~s~s~D~~v~iW 82 (297)
T 2pm7_B 6 NAHNEMIHDAVMDYYG-KRMATCSSDKTIKIFEVEGE-THKLIDTLTGHEGPVWRVDWAHPKFGT-ILASCSYDGKVMIW 82 (297)
T ss_dssp CSCSSCEEEEEECTTS-SEEEEEETTSCEEEEEBCSS-CBCCCEEECCCSSCEEEEEECCGGGCS-EEEEEETTTEEEEE
T ss_pred cCCcCceEEEEECCCC-CEEEEEeCCCEEEEEecCCC-CcEEEEEEccccCCeEEEEecCCCcCC-EEEEEcCCCEEEEE
Confidence 3688999999999998 69999999999999998743 33567788999999999999864 55 99999999999999
Q ss_pred EcCCCc--eeEEeeccccceEEEEEecCC-CCeEEEEeCCCeEEEEeCCCCCc--eeeeccCccceEEEEecCCC-----
Q 021121 135 TVDRPT--SVRTFKEHAYCVYNATWNPRH-SDVFCSASGDCTLRIWDVREMGS--TMIIPAHEFEILACDWNKYD----- 204 (317)
Q Consensus 135 d~~~~~--~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~v~~i~~~~~~----- 204 (317)
|+++++ .+..+..|...|.+++|+|+. +.+|++++.|+.|++||+++... ...+..|...+.+++|+|..
T Consensus 83 d~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~ 162 (297)
T 2pm7_B 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDG 162 (297)
T ss_dssp EBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC-----
T ss_pred EcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccc
Confidence 998874 566777899999999999963 67999999999999999987632 45667899999999999931
Q ss_pred -------CcEEEEEecCCcEEEEEccCCCc---cEEEEecCCCceeEEEecCCC--CeeEEeeecCCeEEEEecccccc-
Q 021121 205 -------DCLIASASVDKSIKIWDVRNYRV---PIAVLNGHGYAVRKVKFSPHR--RNLLASCSYDMTVCLWDFMVEDA- 271 (317)
Q Consensus 205 -------~~~l~~~~~d~~i~v~d~~~~~~---~~~~~~~~~~~v~~~~~~~~~--~~~l~~~~~d~~i~vwd~~~~~~- 271 (317)
+++|++|+.|+.|++||+++.+. ....+.+|...|.+++|+|++ ..+|++++.|++|++||+++...
T Consensus 163 ~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~ 242 (297)
T 2pm7_B 163 EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGP 242 (297)
T ss_dssp -------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSC
T ss_pred cCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCc
Confidence 57999999999999999987653 345678999999999999985 34899999999999999987431
Q ss_pred -eeeee--ecccceeEeEEEEeccCCeEEEeecCCcEEEEecCCC
Q 021121 272 -LVGRY--DHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGMD 313 (317)
Q Consensus 272 -~~~~~--~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~ 313 (317)
....+ ..|...|.+++|+|+ +.+|++++.||.|++|+...+
T Consensus 243 ~~~~~~~~~~~~~~v~~~~~s~~-g~~las~~~D~~v~lw~~~~~ 286 (297)
T 2pm7_B 243 WKKTLLKEEKFPDVLWRASWSLS-GNVLALSGGDNKVTLWKENLE 286 (297)
T ss_dssp CEEEESSSSCCSSCEEEEEECSS-SCCEEEEETTSCEEEEEECTT
T ss_pred cceeeeecccCCCcEEEEEECCC-CCEEEEEcCCCcEEEEEECCC
Confidence 11222 467889999999999 889999999999999998743
No 36
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-43 Score=299.59 Aligned_cols=287 Identities=20% Similarity=0.286 Sum_probs=240.0
Q ss_pred ecCcceeEEEEecCCCCe-EEEEEecccccccCceEEEEec----CCCCC-----cceeeee-e-------cCCCCeeEE
Q 021121 5 KTPFNGYSVKFSPFYESR-LAVATAQNFGILGNGRVHVLDL----SPAAP-----ALTELVA-F-------DTADGVYDL 66 (317)
Q Consensus 5 ~~~~~v~~~~~~p~~~~~-~~~~~~~~~~~~~~g~i~i~~~----~~~~~-----~~~~~~~-~-------~~~~~v~~~ 66 (317)
.+...|.+++|+|+ +. ++++++. ||.|++|++ ..... ....+.. + .|...|+++
T Consensus 43 ~~~~~v~~~~~s~~--~~~~l~~~~~------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (425)
T 1r5m_A 43 VKLDNIVSSTWNPL--DESILAYGEK------NSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCL 114 (425)
T ss_dssp EECSCCSEEEECSS--CTTEEEEEET------BTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEE
T ss_pred eccCceEEEEECCC--CCcEEEEecC------CceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEE
Confidence 45689999999994 54 5555554 899999999 65541 1111110 0 146699999
Q ss_pred EecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeE---
Q 021121 67 AWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVR--- 143 (317)
Q Consensus 67 ~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~--- 143 (317)
+|+|++ .+|++|+.||.|++|+ .. ......+..|...|.+++|+|++. +|++++.||.|++||+.+++.+.
T Consensus 115 ~~s~~~-~~l~~~~~dg~i~i~~-~~---~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~ 188 (425)
T 1r5m_A 115 AWSHDG-NSIVTGVENGELRLWN-KT---GALLNVLNFHRAPIVSVKWNKDGT-HIISMDVENVTILWNVISGTVMQHFE 188 (425)
T ss_dssp EECTTS-SEEEEEETTSCEEEEE-TT---SCEEEEECCCCSCEEEEEECTTSS-EEEEEETTCCEEEEETTTTEEEEEEC
T ss_pred EEcCCC-CEEEEEeCCCeEEEEe-CC---CCeeeeccCCCccEEEEEECCCCC-EEEEEecCCeEEEEECCCCcEEEEee
Confidence 999998 6999999999999999 32 367777889999999999999988 99999999999999997765433
Q ss_pred -----------------------------------------------------EeeccccceEEEEEecCCCCeEEEEeC
Q 021121 144 -----------------------------------------------------TFKEHAYCVYNATWNPRHSDVFCSASG 170 (317)
Q Consensus 144 -----------------------------------------------------~~~~~~~~v~~~~~~~~~~~~l~~~~~ 170 (317)
.+..|...|.+++|+|+ +.++++++.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~ 267 (425)
T 1r5m_A 189 LKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDT-NKLLLSASD 267 (425)
T ss_dssp CC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETT-TTEEEEEET
T ss_pred ccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCC-CCEEEEEcC
Confidence 23356778999999998 889999999
Q ss_pred CCeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEecCCCceeEEEecCCCCe
Q 021121 171 DCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRN 250 (317)
Q Consensus 171 dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 250 (317)
||.|++||+++++....+..|...+.+++|+| ++ ++++++.|+.|++||+++.+ .+..+..|...|.+++|+|+++
T Consensus 268 d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~-~~-~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~i~~~~~s~~~~- 343 (425)
T 1r5m_A 268 DGTLRIWHGGNGNSQNCFYGHSQSIVSASWVG-DD-KVISCSMDGSVRLWSLKQNT-LLALSIVDGVPIFAGRISQDGQ- 343 (425)
T ss_dssp TSCEEEECSSSBSCSEEECCCSSCEEEEEEET-TT-EEEEEETTSEEEEEETTTTE-EEEEEECTTCCEEEEEECTTSS-
T ss_pred CCEEEEEECCCCccceEecCCCccEEEEEECC-CC-EEEEEeCCCcEEEEECCCCc-EeEecccCCccEEEEEEcCCCC-
Confidence 99999999999999999988999999999999 77 99999999999999999866 4777888999999999999998
Q ss_pred eEEeeecCCeEEEEeccccc-------------------ceeeeeecccc--eeEeEEEEeccCCeEEEeecCCcEEEEe
Q 021121 251 LLASCSYDMTVCLWDFMVED-------------------ALVGRYDHHTE--FAVGVDMSVLVEGLLASTGWDELVYVWQ 309 (317)
Q Consensus 251 ~l~~~~~d~~i~vwd~~~~~-------------------~~~~~~~~~~~--~v~~~~~~~~~~~~l~s~~~dg~i~~w~ 309 (317)
+|++++.||.|++||+.+.+ ..+..+..|.. .|.+++|+|+ +.+|++++.||.|++|+
T Consensus 344 ~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~iw~ 422 (425)
T 1r5m_A 344 KYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCA-GNKISVAYSLQEGSVVA 422 (425)
T ss_dssp EEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTT-SSEEEEEESSSCCEEEE
T ss_pred EEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCC-CceEEEEecCceEEEEe
Confidence 79999999999999998765 15677888866 9999999999 78999999999999999
Q ss_pred cC
Q 021121 310 QG 311 (317)
Q Consensus 310 ~~ 311 (317)
+.
T Consensus 423 ~~ 424 (425)
T 1r5m_A 423 IP 424 (425)
T ss_dssp CC
T ss_pred ec
Confidence 86
No 37
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9e-43 Score=289.34 Aligned_cols=283 Identities=15% Similarity=0.192 Sum_probs=243.9
Q ss_pred cCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeE
Q 021121 6 TPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSV 85 (317)
Q Consensus 6 ~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 85 (317)
|...|++++|+| ++.++++++. ||.|++||+..... . .....|...|.+++|+|++ .+|++++.||.|
T Consensus 31 h~~~v~~~~~s~--~~~~l~~~~~------dg~i~vwd~~~~~~-~--~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg~i 98 (369)
T 3zwl_B 31 HERPLTQVKYNK--EGDLLFSCSK------DSSASVWYSLNGER-L--GTLDGHTGTIWSIDVDCFT-KYCVTGSADYSI 98 (369)
T ss_dssp CSSCEEEEEECT--TSCEEEEEES------SSCEEEEETTTCCE-E--EEECCCSSCEEEEEECTTS-SEEEEEETTTEE
T ss_pred eeceEEEEEEcC--CCCEEEEEeC------CCEEEEEeCCCchh-h--hhhhhcCCcEEEEEEcCCC-CEEEEEeCCCeE
Confidence 788999999999 5666666665 99999999987652 1 2223688999999999997 699999999999
Q ss_pred EEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCC-----CEEEEEEcCCCc-----------eeEEeeccc
Q 021121 86 KIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWD-----DTVKLWTVDRPT-----------SVRTFKEHA 149 (317)
Q Consensus 86 ~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~v~iwd~~~~~-----------~~~~~~~~~ 149 (317)
++||+..+ +....+. +...+.+++|+|++. ++++++.+ |.|++||+.... ....+..+.
T Consensus 99 ~iwd~~~~---~~~~~~~-~~~~v~~~~~~~~~~-~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (369)
T 3zwl_B 99 KLWDVSNG---QCVATWK-SPVPVKRVEFSPCGN-YFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHE 173 (369)
T ss_dssp EEEETTTC---CEEEEEE-CSSCEEEEEECTTSS-EEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCT
T ss_pred EEEECCCC---cEEEEee-cCCCeEEEEEccCCC-EEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCc
Confidence 99999876 5555555 889999999999998 89999888 999999998763 334444555
Q ss_pred c--ceEEEEEecCCCCeEEEEeCCCeEEEEeCCC-CCceeeeccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCC
Q 021121 150 Y--CVYNATWNPRHSDVFCSASGDCTLRIWDVRE-MGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYR 226 (317)
Q Consensus 150 ~--~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~ 226 (317)
. .+.+++|+|+ ++++++++.||.|++||+++ .+....+..|...+.+++|+| ++++|++++.|+.|++||+++.+
T Consensus 174 ~~~~~~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~~ 251 (369)
T 3zwl_B 174 GLDAATVAGWSTK-GKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSP-DLTYFITSSRDTNSFLVDVSTLQ 251 (369)
T ss_dssp TCCCEEEEEECGG-GCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCC
T ss_pred CccceeEEEEcCC-CCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECC-CCCEEEEecCCceEEEEECCCCc
Confidence 5 8999999998 88999999999999999998 677888888999999999999 99999999999999999999876
Q ss_pred ccEEEEecCCCceeEEEecCCCCeeEEeeecCC--------------eEEEEecccccceeeeeecccceeEeEEEEecc
Q 021121 227 VPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDM--------------TVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLV 292 (317)
Q Consensus 227 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~--------------~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~ 292 (317)
. +..+. +...+.+++|+|+++ ++++++.++ .+++||..+++ ....+.+|...|.+++|+|+
T Consensus 252 ~-~~~~~-~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~-~~~~~~~~~~~v~~~~~s~~- 326 (369)
T 3zwl_B 252 V-LKKYE-TDCPLNTAVITPLKE-FIILGGGQEAKDVTTTSANEGKFEARFYHKIFEE-EIGRVQGHFGPLNTVAISPQ- 326 (369)
T ss_dssp E-EEEEE-CSSCEEEEEECSSSS-EEEEEECCC-------------CEEEEEETTTCC-EEEEEECCSSCEEEEEECTT-
T ss_pred e-eeeec-CCCCceeEEecCCCc-eEEEeecCCCceEEEEecCCCcceeEEEecCCCc-chhheecccCcEEEEEECCC-
Confidence 4 55555 778999999999999 688888887 89999999886 66788899999999999998
Q ss_pred CCeEEEeecCCcEEEEecCC
Q 021121 293 EGLLASTGWDELVYVWQQGM 312 (317)
Q Consensus 293 ~~~l~s~~~dg~i~~w~~~~ 312 (317)
+.+|++++.||.|++|++..
T Consensus 327 ~~~l~s~~~dg~v~iw~~~~ 346 (369)
T 3zwl_B 327 GTSYASGGEDGFIRLHHFEK 346 (369)
T ss_dssp SSEEEEEETTSEEEEEEECH
T ss_pred CCEEEEEcCCCeEEEEECcc
Confidence 88999999999999999975
No 38
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.9e-43 Score=294.61 Aligned_cols=282 Identities=19% Similarity=0.321 Sum_probs=237.8
Q ss_pred ceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeEEEE
Q 021121 9 NGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIY 88 (317)
Q Consensus 9 ~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~ 88 (317)
.+.+++|++ +.+++++. +|.|++|++.... ........|...|.+++|+|++ .+|++|+.||.|++|
T Consensus 95 ~~~~~~~s~---~~l~~~~~-------d~~v~lw~~~~~~--~~~~~~~~~~~~v~~v~~s~~~-~~l~~~~~dg~i~iw 161 (401)
T 4aez_A 95 YLNLLDWSN---LNVVAVAL-------ERNVYVWNADSGS--VSALAETDESTYVASVKWSHDG-SFLSVGLGNGLVDIY 161 (401)
T ss_dssp TCBCEEECT---TSEEEEEE-------TTEEEEEETTTCC--EEEEEECCTTCCEEEEEECTTS-SEEEEEETTSCEEEE
T ss_pred eEEEEeecC---CCEEEEEC-------CCeEEEeeCCCCc--EeEeeecCCCCCEEEEEECCCC-CEEEEECCCCeEEEE
Confidence 345577777 34555554 8999999998765 3333334578899999999998 699999999999999
Q ss_pred EeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcC-CCceeEEeeccccceEEEEEecCCCCeEEE
Q 021121 89 DTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVD-RPTSVRTFKEHAYCVYNATWNPRHSDVFCS 167 (317)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 167 (317)
|+..+ +.+..+..|...|.+++|++ . ++++++.||.|++||++ .......+..|...|.+++|+|+ +.++++
T Consensus 162 d~~~~---~~~~~~~~~~~~v~~~~~~~--~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s 234 (401)
T 4aez_A 162 DVESQ---TKLRTMAGHQARVGCLSWNR--H-VLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSD-GLQLAS 234 (401)
T ss_dssp ETTTC---CEEEEECCCSSCEEEEEEET--T-EEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTT-SSEEEE
T ss_pred ECcCC---eEEEEecCCCCceEEEEECC--C-EEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCC-CCEEEE
Confidence 99866 67778889999999999953 4 89999999999999998 46677888899999999999998 899999
Q ss_pred EeCCCeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEe--cCCcEEEEEccCCCccEEEEecCCCceeEEEec
Q 021121 168 ASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASAS--VDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFS 245 (317)
Q Consensus 168 ~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~--~d~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~ 245 (317)
++.||.|++||+++++....+..|...|.+++|+|....++++++ .|+.|++||+++.+. +..+. +...|.+++|+
T Consensus 235 ~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~-~~~~~-~~~~v~~~~~s 312 (401)
T 4aez_A 235 GGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGAR-VNTVD-AGSQVTSLIWS 312 (401)
T ss_dssp EETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCE-EEEEE-CSSCEEEEEEC
T ss_pred EeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCE-EEEEe-CCCcEEEEEEC
Confidence 999999999999999999899899999999999995567777765 799999999998763 55554 66789999999
Q ss_pred CCCCeeEEe--eecCCeEEEEecccccc-eeeeeecccceeEeEEEEeccCCeEEEeecCCcEEEEecCCCC
Q 021121 246 PHRRNLLAS--CSYDMTVCLWDFMVEDA-LVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGMDP 314 (317)
Q Consensus 246 ~~~~~~l~~--~~~d~~i~vwd~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~ 314 (317)
|+++ ++++ |+.||.|++||+.+++. ....+.+|...|.+++|+|+ +.+|++++.||.|++|++....
T Consensus 313 ~~~~-~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~d-g~~l~s~~~dg~i~iw~~~~~~ 382 (401)
T 4aez_A 313 PHSK-EIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPD-GRILSTAASDENLKFWRVYDGD 382 (401)
T ss_dssp SSSS-EEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTT-SSEEEEECTTSEEEEEECCC--
T ss_pred CCCC-eEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCC-CCEEEEEeCCCcEEEEECCCCc
Confidence 9999 5666 44899999999988652 23346789999999999998 8899999999999999998754
No 39
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.4e-45 Score=306.17 Aligned_cols=288 Identities=14% Similarity=0.158 Sum_probs=226.2
Q ss_pred cCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceee-eeecCCCCeeEEEecCCCCCeEEEEEcCCe
Q 021121 6 TPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTEL-VAFDTADGVYDLAWSESHDSLLIAAVADGS 84 (317)
Q Consensus 6 ~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 84 (317)
+..+|++++|+| ++.++++++. ||.|++||+.... .... ....|...|.+++|+|++ .+|++++.|+.
T Consensus 10 ~~~~v~~~~~s~--~g~~l~~~~~------d~~i~iw~~~~~~--~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~s~d~~ 78 (377)
T 3dwl_C 10 LPKPSYEHAFNS--QRTEFVTTTA------TNQVELYEQDGNG--WKHARTFSDHDKIVTCVDWAPKS-NRIVTCSQDRN 78 (377)
T ss_dssp CSSCCSCCEECS--SSSEEECCCS------SSCBCEEEEETTE--EEECCCBCCCSSCEEEEEECTTT-CCEEEEETTSS
T ss_pred CCCcEEEEEECC--CCCEEEEecC------CCEEEEEEccCCc--eEEEEEEecCCceEEEEEEeCCC-CEEEEEeCCCe
Confidence 457899999999 5677777765 9999999998653 1112 222688999999999998 69999999999
Q ss_pred EEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCc---eeEEeec-cccceEEEEEecC
Q 021121 85 VKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPT---SVRTFKE-HAYCVYNATWNPR 160 (317)
Q Consensus 85 i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~---~~~~~~~-~~~~v~~~~~~~~ 160 (317)
|++||+..+........+..|...|.+++|+|++. +|++++.|+.|++||+++++ ....+.. |...|.+++|+|+
T Consensus 79 v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 157 (377)
T 3dwl_C 79 AYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNED-KFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPN 157 (377)
T ss_dssp EEEC------CCCCEEECCCCSSCEEEEECCTTSS-CCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTT
T ss_pred EEEEEcCCCCceeeeeEecccCCceEEEEECCCCC-EEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCC
Confidence 99999987633446677788999999999999988 89999999999999999886 4677777 9999999999998
Q ss_pred CCCeEEEEeCCCeEEEEeCCC------------------CCceeeeccCccceEEEEecCCCCcEEEEEecCCcEEEEEc
Q 021121 161 HSDVFCSASGDCTLRIWDVRE------------------MGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222 (317)
Q Consensus 161 ~~~~l~~~~~dg~i~i~d~~~------------------~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~ 222 (317)
++++++++.|+.|++||++. ++.+..+ .|...|.+++|+| ++++|++++.|+.|++||+
T Consensus 158 -~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp-~~~~l~~~~~d~~i~iwd~ 234 (377)
T 3dwl_C 158 -NVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSP-SGNALAYAGHDSSVTIAYP 234 (377)
T ss_dssp -SSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECT-TSSCEEEEETTTEEC-CEE
T ss_pred -CCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECC-CCCEEEEEeCCCcEEEEEC
Confidence 89999999999999999853 3344455 7889999999999 9999999999999999999
Q ss_pred cCCCcc---EEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEeccccc-cee-------------------------
Q 021121 223 RNYRVP---IAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVED-ALV------------------------- 273 (317)
Q Consensus 223 ~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~-~~~------------------------- 273 (317)
++.+.+ +..+..|...|.+++|+|+++ +|++++.++.+ +|+..... ...
T Consensus 235 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (377)
T 3dwl_C 235 SAPEQPPRALITVKLSQLPLRSLLWANESA-IVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEE 312 (377)
T ss_dssp CSTTSCEEECCCEECSSSCEEEEEEEETTE-EEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-
T ss_pred CCCCCcceeeEeecCCCCceEEEEEcCCCC-EEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccccccccccc
Confidence 987652 566788999999999999998 78888766655 66654211 000
Q ss_pred ---------e----------------eeecccceeEeEEEEeccCC---eEEEeecCCcEEEEec
Q 021121 274 ---------G----------------RYDHHTEFAVGVDMSVLVEG---LLASTGWDELVYVWQQ 310 (317)
Q Consensus 274 ---------~----------------~~~~~~~~v~~~~~~~~~~~---~l~s~~~dg~i~~w~~ 310 (317)
. ....|...|+++++.+..+. .|+|+|.||.|++||+
T Consensus 313 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 313 GPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp ------------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred cccccccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 0 11128899999998776344 6999999999999986
No 40
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.7e-44 Score=297.22 Aligned_cols=251 Identities=19% Similarity=0.286 Sum_probs=210.5
Q ss_pred eecCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcc-eeeeeecCCCCeeEEEecCCCCCeEEEEEcC
Q 021121 4 FKTPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPAL-TELVAFDTADGVYDLAWSESHDSLLIAAVAD 82 (317)
Q Consensus 4 ~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 82 (317)
..+...|.+++|+| ++.+++++. ||.|+|||+...+... ......+|...|++++|+|++ .+|++|+.|
T Consensus 91 ~~~~~~V~~~~~s~--d~~~l~~s~-------dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg-~~l~sgs~d 160 (357)
T 4g56_B 91 VQTEAGVTDVAWVS--EKGILVASD-------SGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDG-TQAVSGGKD 160 (357)
T ss_dssp EECSSCEEEEEEET--TTEEEEEET-------TSCEEEC--------CCCCEEECCCSSCEEEEEECSSS-SEEEEEETT
T ss_pred CCCCCCEEEEEEcC--CCCEEEEEC-------CCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCC-CEEEEEeCC
Confidence 34677899999999 678887765 8999999998765322 233444789999999999998 699999999
Q ss_pred CeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEee--ccccceEEEEEecC
Q 021121 83 GSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFK--EHAYCVYNATWNPR 160 (317)
Q Consensus 83 g~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~ 160 (317)
+.|++||+.++ +.+..+..|...|.+++|+|++..++++++.||.|++||+++++....+. .+...+.+++|+|+
T Consensus 161 g~v~iwd~~~~---~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~ 237 (357)
T 4g56_B 161 FSVKVWDLSQK---AVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPE 237 (357)
T ss_dssp SCEEEEETTTT---EEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTT
T ss_pred CeEEEEECCCC---cEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhc
Confidence 99999999876 77888899999999999999987689999999999999999987766543 46678999999999
Q ss_pred CCCeEEEEeCCCeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEecCCCcee
Q 021121 161 HSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVR 240 (317)
Q Consensus 161 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~v~ 240 (317)
++.+|++|+.|+.|++||+++++.+..+..|...|++++|+|..+++|++++.|++|++||+++++ +....+|...|+
T Consensus 238 ~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~--~~~~~~H~~~V~ 315 (357)
T 4g56_B 238 KDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSE--VFRDLSHRDFVT 315 (357)
T ss_dssp STTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCE--EEEECCCSSCEE
T ss_pred ccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCc--EeEECCCCCCEE
Confidence 788999999999999999999999999999999999999999445789999999999999998865 334458999999
Q ss_pred EEEecC-CCCeeEEeeecCCeEEEEeccccc
Q 021121 241 KVKFSP-HRRNLLASCSYDMTVCLWDFMVED 270 (317)
Q Consensus 241 ~~~~~~-~~~~~l~~~~~d~~i~vwd~~~~~ 270 (317)
+++|+| ++. +|++++.||+|++|++.+..
T Consensus 316 ~vafsP~d~~-~l~s~s~Dg~v~iW~~~~~~ 345 (357)
T 4g56_B 316 GVAWSPLDHS-KFTTVGWDHKVLHHHLPSEG 345 (357)
T ss_dssp EEEECSSSTT-EEEEEETTSCEEEEECC---
T ss_pred EEEEeCCCCC-EEEEEcCCCeEEEEECCCCC
Confidence 999999 566 79999999999999997654
No 41
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1.1e-43 Score=301.10 Aligned_cols=306 Identities=21% Similarity=0.377 Sum_probs=251.1
Q ss_pred eecCcceeEEEEecCCC---------CeEEEEEecccccccCceEEEEecC------------------------CCCCc
Q 021121 4 FKTPFNGYSVKFSPFYE---------SRLAVATAQNFGILGNGRVHVLDLS------------------------PAAPA 50 (317)
Q Consensus 4 ~~~~~~v~~~~~~p~~~---------~~~~~~~~~~~~~~~~g~i~i~~~~------------------------~~~~~ 50 (317)
+....+..++.|.|+.. .++++++... . ....|.++++. ...+.
T Consensus 42 ~~l~wp~l~~~~~p~~~~~~~~~~~~~~~~~GT~t~-~--~~n~i~i~~~~lp~~~~~~~~~~~d~~~~~~~~~~~~~~~ 118 (430)
T 2xyi_A 42 HALEWPSLTAQWLPDVTKQDGKDYSVHRLILGTHTS-D--EQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGK 118 (430)
T ss_dssp EECSSCCSCEEECSCCEECTTCSCEEEEEEEECCCS-S--SCEEEEEEEEEEC--------------------------C
T ss_pred cCCCCCceEEEECcccccccCCCcceEEEEEEEcCC-C--CCCEEEEEEEECCCCccccccccccccccccccccCCCCc
Confidence 44567889999999642 3455554421 1 24578888653 11123
Q ss_pred ceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCC-------CCCCCceeeccCCcceEEEEEecCCCCEEE
Q 021121 51 LTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALP-------PTANPIRSLHEHTREVHSADYNPTRRDSFI 123 (317)
Q Consensus 51 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~-------~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 123 (317)
+.......|.+.|++++|+|++..+|++++.+|.|++|++... ........+.+|...|.+++|+|++..+|+
T Consensus 119 ~~~~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~ 198 (430)
T 2xyi_A 119 IEIEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLL 198 (430)
T ss_dssp EEEEEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEE
T ss_pred eEEEEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEE
Confidence 4445566899999999999985579999999999999999752 124667778899999999999999877999
Q ss_pred EEcCCCEEEEEEcCCCce-------eEEeeccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCC---CceeeeccCcc
Q 021121 124 TSSWDDTVKLWTVDRPTS-------VRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREM---GSTMIIPAHEF 193 (317)
Q Consensus 124 ~~~~dg~v~iwd~~~~~~-------~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~---~~~~~~~~~~~ 193 (317)
+|+.||.|++||+.++.. ...+..|...|.+++|+|+++.+|++++.||.|++||++++ +....+..|..
T Consensus 199 s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 278 (430)
T 2xyi_A 199 SASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTA 278 (430)
T ss_dssp EECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSS
T ss_pred EEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCC
Confidence 999999999999987432 45667899999999999976899999999999999999987 56677778999
Q ss_pred ceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEeccccc---
Q 021121 194 EILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVED--- 270 (317)
Q Consensus 194 ~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~--- 270 (317)
.+++++|+|....++++|+.||.|++||+++...++..+..|...|++++|+|+++.+|++++.|+.|++||+....
T Consensus 279 ~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~ 358 (430)
T 2xyi_A 279 EVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQ 358 (430)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCC
T ss_pred CeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCcccc
Confidence 99999999944458999999999999999987767888999999999999999998789999999999999998732
Q ss_pred ----------ceeeeeecccceeEeEEEEeccCCeEEEeecCCcEEEEecCC
Q 021121 271 ----------ALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGM 312 (317)
Q Consensus 271 ----------~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~ 312 (317)
.++..+.+|...|++++|+|++..+|++++.||.|++|++..
T Consensus 359 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 359 STEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp CHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred CccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 356677789999999999999434999999999999999864
No 42
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=6.8e-43 Score=307.04 Aligned_cols=279 Identities=26% Similarity=0.415 Sum_probs=244.3
Q ss_pred cCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeE
Q 021121 6 TPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSV 85 (317)
Q Consensus 6 ~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 85 (317)
+...|.+++|+| ++..+++++. ++.|++|+.+... .. ....|...|.+++|+|++ ..+++++.|+.|
T Consensus 261 ~~~~v~~v~~~~--d~~~l~~~~~------d~~i~~w~~~~~~--~~--~~~~h~~~v~~~~~~~~~-~~l~t~~~d~~i 327 (577)
T 2ymu_A 261 HSSSVNGVAFRP--DGQTIASASD------DKTVKLWNRNGQL--LQ--TLTGHSSSVWGVAFSPDG-QTIASASDDKTV 327 (577)
T ss_dssp CSSCEEEEEECT--TSSEEEEEET------TSCEEEEETTSCE--EE--EECCCSSCEEEEEECTTS-SEEEEEETTSCE
T ss_pred CCCCEEEEEEcC--CCCEEEEEeC------CCEEEEEeCCCcE--EE--EEecCCCCeEEEEECCCC-CEEEEEeCCCeE
Confidence 677899999999 5666666665 8999999975431 22 223688899999999998 699999999999
Q ss_pred EEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeeccccceEEEEEecCCCCeE
Q 021121 86 KIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVF 165 (317)
Q Consensus 86 ~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 165 (317)
++||... ..+..+..|...+.+++|+|++. ++++++.||.|++||. +++.+..+..|...|.+++|+|+ +++|
T Consensus 328 ~~w~~~~----~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d-g~~l 400 (577)
T 2ymu_A 328 KLWNRNG----QHLQTLTGHSSSVWGVAFSPDGQ-TIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPD-GQTI 400 (577)
T ss_dssp EEEETTS----CEEEEECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTT-SSCE
T ss_pred EEEeCCC----CeeEEEeCCCCCEEEEEECCCCC-EEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCC-CCEE
Confidence 9999754 45567788999999999999998 9999999999999995 57788888999999999999999 8899
Q ss_pred EEEeCCCeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEecCCCceeEEEec
Q 021121 166 CSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFS 245 (317)
Q Consensus 166 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~ 245 (317)
++++.|+.|++||. +++.+..+..|...|.+++|+| ++++|++++.|+.|++||... + .+..+.+|...|++++|+
T Consensus 401 ~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~-d~~~l~~~~~d~~v~~w~~~~-~-~~~~~~~~~~~v~~~~~s 476 (577)
T 2ymu_A 401 ASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSP-DDQTIASASDDKTVKLWNRNG-Q-LLQTLTGHSSSVRGVAFS 476 (577)
T ss_dssp EEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTS-C-EEEEEECCSSCEEEEEEC
T ss_pred EEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECC-CCCEEEEEcCCCEEEEEECCC-C-EEEEEcCCCCCEEEEEEc
Confidence 99999999999995 5677888889999999999999 999999999999999999753 3 477888999999999999
Q ss_pred CCCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEeecCCcEEEEecCC
Q 021121 246 PHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGM 312 (317)
Q Consensus 246 ~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~ 312 (317)
|+++ +|++++.|+.|++||.. ++ ++..+.+|...|++++|+|+ +++|++++.||.|++||...
T Consensus 477 pd~~-~las~~~d~~i~iw~~~-~~-~~~~~~~h~~~v~~l~~s~d-g~~l~s~~~dg~v~lwd~~~ 539 (577)
T 2ymu_A 477 PDGQ-TIASASDDKTVKLWNRN-GQ-LLQTLTGHSSSVRGVAFSPD-GQTIASASDDKTVKLWNRNG 539 (577)
T ss_dssp TTSC-EEEEEETTSEEEEEETT-SC-EEEEEECCSSCEEEEEECTT-SSCEEEEETTSEEEEECTTS
T ss_pred CCCC-EEEEEeCCCEEEEEcCC-CC-EEEEEeCCCCCEEEEEEcCC-CCEEEEEECcCEEEEEeCCC
Confidence 9998 79999999999999953 43 67788999999999999999 88999999999999999754
No 43
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.8e-42 Score=292.79 Aligned_cols=287 Identities=20% Similarity=0.336 Sum_probs=239.0
Q ss_pred ceecCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcC
Q 021121 3 VFKTPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVAD 82 (317)
Q Consensus 3 ~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 82 (317)
.+...+....|+||+ .+.++++. |+.|+|||..++. ....+....|...|++++|+|++ .+|++|+.|
T Consensus 101 ~~~~d~y~~~l~wS~--~n~lAvgl--------d~tV~lWd~~tg~-~~~~~~~~~~~~~V~sv~fspdg-~~lasgs~D 168 (420)
T 4gga_A 101 EIRNDYYLNLVDWSS--GNVLAVAL--------DNSVYLWSASSGD-ILQLLQMEQPGEYISSVAWIKEG-NYLAVGTSS 168 (420)
T ss_dssp TCCCCTTCBCEEECT--TSEEEEEE--------TTEEEEEETTTCC-EEEEEECCSTTCCEEEEEECTTS-SEEEEEETT
T ss_pred CCcccccceeEEECC--CCEEEEEe--------CCEEEEEECCCCC-EEEEEEecCCCCcEEEEEECCCC-CEEEEEECC
Confidence 344455677899998 56555543 7899999998765 22333334677889999999998 699999999
Q ss_pred CeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCC-ceeEEeeccccceEEEEEecCC
Q 021121 83 GSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRP-TSVRTFKEHAYCVYNATWNPRH 161 (317)
Q Consensus 83 g~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~ 161 (317)
|.|++||+..+ +.+..+.+|...+.++.+++ . ++++|+.|+.+++||.... ..+..+.+|...+..+.|+|+
T Consensus 169 g~v~iWd~~~~---~~~~~~~~h~~~v~~~s~~~--~-~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~- 241 (420)
T 4gga_A 169 AEVQLWDVQQQ---KRLRNMTSHSARVGSLSWNS--Y-ILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPD- 241 (420)
T ss_dssp SCEEEEETTTT---EEEEEECCCSSCEEEEEEET--T-EEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTT-
T ss_pred CeEEEEEcCCC---cEEEEEeCCCCceEEEeeCC--C-EEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCC-
Confidence 99999999876 77888899999999998874 4 8999999999999998864 456778899999999999999
Q ss_pred CCeEEEEeCCCeEEEEeCCCCCc----eeeeccCccceEEEEecCCCCcEEEEE--ecCCcEEEEEccCCCccEEEEecC
Q 021121 162 SDVFCSASGDCTLRIWDVREMGS----TMIIPAHEFEILACDWNKYDDCLIASA--SVDKSIKIWDVRNYRVPIAVLNGH 235 (317)
Q Consensus 162 ~~~l~~~~~dg~i~i~d~~~~~~----~~~~~~~~~~v~~i~~~~~~~~~l~~~--~~d~~i~v~d~~~~~~~~~~~~~~ 235 (317)
+.++++++.|+.+++||..+++. +.....|...|.+++|+|.+..+++++ +.|+.|++||+++++. ...+..|
T Consensus 242 g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~-~~~~~~~ 320 (420)
T 4gga_A 242 GRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGAC-LSAVDAH 320 (420)
T ss_dssp SSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEE-EEEEECS
T ss_pred CCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcccc-ceeeccc
Confidence 89999999999999999987653 455667889999999999777777764 4799999999998764 5555544
Q ss_pred CCceeEEEecCCCCeeEEe-eecCCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEeecCCcEEEEecCC
Q 021121 236 GYAVRKVKFSPHRRNLLAS-CSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGM 312 (317)
Q Consensus 236 ~~~v~~~~~~~~~~~~l~~-~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~ 312 (317)
..+.++.|+|+++.++++ |+.|+.|+|||+.+++ ++..+.+|.+.|++++|+|+ +.+|+||+.|++|++||+..
T Consensus 321 -~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~-~v~~l~gH~~~V~~l~~spd-g~~l~S~s~D~tvriWdv~~ 395 (420)
T 4gga_A 321 -SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA-KVAELKGHTSRVLSLTMSPD-GATVASAAADETLRLWRCFE 395 (420)
T ss_dssp -SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC-EEEEECCCSSCEEEEEECTT-SSCEEEEETTTEEEEECCSC
T ss_pred -cceeeeeecCCCCeEEEEEecCCCEEEEEECCCCc-EEEEEcCCCCCEEEEEEcCC-CCEEEEEecCCeEEEEECCC
Confidence 578899999999964433 2378999999999886 66889999999999999999 88999999999999999965
No 44
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-42 Score=281.68 Aligned_cols=281 Identities=20% Similarity=0.240 Sum_probs=240.2
Q ss_pred cCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeE
Q 021121 6 TPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSV 85 (317)
Q Consensus 6 ~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 85 (317)
|...|.+++| | ++.++++++. ||.|++||+.... .......|...|.+++|+|++ .+|++++.||.|
T Consensus 17 h~~~v~~~~~-~--~~~~l~s~~~------dg~v~vw~~~~~~---~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i 83 (313)
T 3odt_A 17 HDQDVRDVVA-V--DDSKVASVSR------DGTVRLWSKDDQW---LGTVVYTGQGFLNSVCYDSEK-ELLLFGGKDTMI 83 (313)
T ss_dssp CSSCEEEEEE-E--ETTEEEEEET------TSEEEEEEESSSE---EEEEEEECSSCEEEEEEETTT-TEEEEEETTSCE
T ss_pred CCCCcEEEEe-c--CCCEEEEEEc------CCcEEEEECCCCE---EEEEeecCCccEEEEEECCCC-CEEEEecCCCeE
Confidence 7889999999 7 3444555554 9999999996643 222333678899999999998 699999999999
Q ss_pred EEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeeccccceEEEEEecCCCCeE
Q 021121 86 KIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVF 165 (317)
Q Consensus 86 ~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 165 (317)
++|++......+....+..|...|.+++|. +. ++++++.||.|++|| .++....+..|...+.++.|.|.+++++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~-~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l 158 (313)
T 3odt_A 84 NGVPLFATSGEDPLYTLIGHQGNVCSLSFQ--DG-VVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKF 158 (313)
T ss_dssp EEEETTCCTTSCC-CEECCCSSCEEEEEEE--TT-EEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEE
T ss_pred EEEEeeecCCCCcccchhhcccCEEEEEec--CC-EEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEE
Confidence 999998776667778888999999999994 44 899999999999999 6778888889999999999999448999
Q ss_pred EEEeCCCeEEEEeCCCCCceeeecc-CccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEecCCCceeEEEe
Q 021121 166 CSASGDCTLRIWDVREMGSTMIIPA-HEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKF 244 (317)
Q Consensus 166 ~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~ 244 (317)
++++.||.|++||. .+....+.. +...+.+++|+| ++. +++++.|+.|++||+++.+ ++..+..|...|++++|
T Consensus 159 ~~~~~d~~i~i~d~--~~~~~~~~~~~~~~i~~~~~~~-~~~-~~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~i~~~~~ 233 (313)
T 3odt_A 159 LTASADKTIKLWQN--DKVIKTFSGIHNDVVRHLAVVD-DGH-FISCSNDGLIKLVDMHTGD-VLRTYEGHESFVYCIKL 233 (313)
T ss_dssp EEEETTSCEEEEET--TEEEEEECSSCSSCEEEEEEEE-TTE-EEEEETTSEEEEEETTTCC-EEEEEECCSSCEEEEEE
T ss_pred EEEECCCCEEEEec--CceEEEEeccCcccEEEEEEcC-CCe-EEEccCCCeEEEEECCchh-hhhhhhcCCceEEEEEE
Confidence 99999999999993 455566665 888999999999 777 8999999999999999866 47888899999999999
Q ss_pred cCCCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEeecCCcEEEEecCCCC
Q 021121 245 SPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGMDP 314 (317)
Q Consensus 245 ~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~ 314 (317)
+|++. |++++.||.|++||+++++ ....+..|...|.+++|+|+ +. +++++.||.|++|++....
T Consensus 234 ~~~~~--l~~~~~dg~v~iwd~~~~~-~~~~~~~~~~~i~~~~~~~~-~~-~~~~~~dg~i~iw~~~~~~ 298 (313)
T 3odt_A 234 LPNGD--IVSCGEDRTVRIWSKENGS-LKQVITLPAISIWSVDCMSN-GD-IIVGSSDNLVRIFSQEKSR 298 (313)
T ss_dssp CTTSC--EEEEETTSEEEEECTTTCC-EEEEEECSSSCEEEEEECTT-SC-EEEEETTSCEEEEESCGGG
T ss_pred ecCCC--EEEEecCCEEEEEECCCCc-eeEEEeccCceEEEEEEccC-CC-EEEEeCCCcEEEEeCCCCc
Confidence 99983 8889999999999999886 66788889999999999998 55 6779999999999998653
No 45
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=6.4e-44 Score=295.78 Aligned_cols=298 Identities=11% Similarity=0.090 Sum_probs=227.7
Q ss_pred eecCcceeEEEEecCCCCeEEEEEecccccc-cCceEEEEecCCCCCcc-------eeeeeecCCCCeeEEEecCCCCCe
Q 021121 4 FKTPFNGYSVKFSPFYESRLAVATAQNFGIL-GNGRVHVLDLSPAAPAL-------TELVAFDTADGVYDLAWSESHDSL 75 (317)
Q Consensus 4 ~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~-~~g~i~i~~~~~~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~~ 75 (317)
++..+||++++|+| +++++++++...... -+++|++|++....... .......+...|.++++.+ ..
T Consensus 11 ~~~g~PV~sv~fs~--dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~---~~ 85 (365)
T 4h5i_A 11 YNVGYPAYGAKFLN--NDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASK---GI 85 (365)
T ss_dssp EECSSCEEEEEEEE--TTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEET---TE
T ss_pred cCCCCCEEEEEEeC--CCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCC---CE
Confidence 44578999999999 788888876421100 13469999998665321 1122235677788887764 35
Q ss_pred EEEE-----------EcCCeEEEEEeCCCCCCC-Cce-----eeccCCcceEEEEEecCCCCEEE--EEcCCCEEEEEEc
Q 021121 76 LIAA-----------VADGSVKIYDTALPPTAN-PIR-----SLHEHTREVHSADYNPTRRDSFI--TSSWDDTVKLWTV 136 (317)
Q Consensus 76 l~~~-----------~~dg~i~v~~~~~~~~~~-~~~-----~~~~~~~~v~~~~~~~~~~~~l~--~~~~dg~v~iwd~ 136 (317)
+++| +.|+.+++|++....... ... ....+...+.+++|+|||+ +++ +++.|++|++||+
T Consensus 86 ~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~-~la~as~~~d~~i~iwd~ 164 (365)
T 4h5i_A 86 ILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGT-VAAIASSKVPAIMRIIDP 164 (365)
T ss_dssp EEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSS-CEEEEESCSSCEEEEEET
T ss_pred EEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCC-EEEEEECCCCCEEEEeEC
Confidence 5555 346789999987642211 111 1123455689999999998 554 4557899999999
Q ss_pred CCCceeEEeeccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCcee--eeccCccceEEEEecCCCCcEEEEEecC
Q 021121 137 DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM--IIPAHEFEILACDWNKYDDCLIASASVD 214 (317)
Q Consensus 137 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~--~~~~~~~~v~~i~~~~~~~~~l~~~~~d 214 (317)
++++.+..+. |...|.+++|+|+ ++++++++.+ .+.+|+..+++.+. ....|...+.+++|+| +++++++++.|
T Consensus 165 ~~~~~~~~~~-~~~~V~~v~fspd-g~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fsp-dg~~l~~~s~d 240 (365)
T 4h5i_A 165 SDLTEKFEIE-TRGEVKDLHFSTD-GKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIA-DDTVLIAASLK 240 (365)
T ss_dssp TTTEEEEEEE-CSSCCCEEEECTT-SSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEE-TTEEEEEEEES
T ss_pred CCCcEEEEeC-CCCceEEEEEccC-CceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcC-CCCEEEEEecC
Confidence 9999988886 7788999999999 8899888855 56677777666543 3346788899999999 99999999988
Q ss_pred C----cEEEEEccCCCcc---EEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEE
Q 021121 215 K----SIKIWDVRNYRVP---IAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVD 287 (317)
Q Consensus 215 ~----~i~v~d~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~ 287 (317)
+ .++.||+...... ...+.+|...|++++|+|+++ +|++|+.|++|+|||+++++.+...+.+|...|++++
T Consensus 241 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~-~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~ 319 (365)
T 4h5i_A 241 KGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGE-LAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVT 319 (365)
T ss_dssp SSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSC-EEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEE
T ss_pred CcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCC-ceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEE
Confidence 7 6888998765432 345678999999999999999 7999999999999999998755444689999999999
Q ss_pred EEeccCCeEEEeecCCcEEEEecCCC
Q 021121 288 MSVLVEGLLASTGWDELVYVWQQGMD 313 (317)
Q Consensus 288 ~~~~~~~~l~s~~~dg~i~~w~~~~~ 313 (317)
|+|+ +++|+||+.|++|+||++..+
T Consensus 320 fSpd-g~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 320 ISPD-STYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp ECTT-SCEEEEEETTSEEEEEECCTT
T ss_pred ECCC-CCEEEEEeCCCeEEEEEcCCC
Confidence 9999 899999999999999999653
No 46
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=6.7e-43 Score=287.30 Aligned_cols=245 Identities=22% Similarity=0.329 Sum_probs=218.8
Q ss_pred ecCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEc
Q 021121 57 FDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTV 136 (317)
Q Consensus 57 ~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~ 136 (317)
.+|.+.|.+++|+|++ .+|++|+.||.|++||+..+ .....+..|...|.+++|+|++. ++++++.|+.|++|++
T Consensus 52 ~gH~~~v~~~~~s~d~-~~l~s~s~Dg~v~iWd~~~~---~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~~d~~v~iw~~ 126 (340)
T 1got_B 52 RGHLAKIYAMHWGTDS-RLLLSASQDGKLIIWDSYTT---NKVHAIPLRSSWVMTCAYAPSGN-YVACGGLDNICSIYNL 126 (340)
T ss_dssp CCCSSCEEEEEECTTS-SEEEEEETTTEEEEEETTTC---CEEEEEECSSSCEEEEEECTTSS-EEEEEETTCEEEEEET
T ss_pred cCCCCceEEEEECCCC-CEEEEEeCCCcEEEEECCCC---CcceEeecCCccEEEEEECCCCC-EEEEEeCCCeEEEEEC
Confidence 3789999999999998 69999999999999998766 66777888999999999999998 9999999999999999
Q ss_pred CCCc----eeEEeeccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEe
Q 021121 137 DRPT----SVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASAS 212 (317)
Q Consensus 137 ~~~~----~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~ 212 (317)
.+.+ ....+.+|...|.++.|+++ + .+++++.|+.|++||+++++.+..+.+|...|.+++|+| +++++++|+
T Consensus 127 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~sg~ 203 (340)
T 1got_B 127 KTREGNVRVSRELAGHTGYLSCCRFLDD-N-QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAP-DTRLFVSGA 203 (340)
T ss_dssp TTCSBSCEEEEEEECCSSCEEEEEEEET-T-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEE
T ss_pred ccCCCcceeEEEecCCCccEEEEEECCC-C-cEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECC-CCCEEEEEe
Confidence 8753 45667789999999999986 4 488999999999999999999999999999999999999 999999999
Q ss_pred cCCcEEEEEccCCCccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeee--cccceeEeEEEEe
Q 021121 213 VDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYD--HHTEFAVGVDMSV 290 (317)
Q Consensus 213 ~d~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~--~~~~~v~~~~~~~ 290 (317)
.|+.|++||+++.. +...+.+|...|++++|+|++. +|++++.||.|++||+++.+.. ..+. .+...|.+++|+|
T Consensus 204 ~d~~v~~wd~~~~~-~~~~~~~h~~~v~~v~~~p~~~-~l~s~s~d~~v~iwd~~~~~~~-~~~~~~~~~~~v~~~~~s~ 280 (340)
T 1got_B 204 CDASAKLWDVREGM-CRQTFTGHESDINAICFFPNGN-AFATGSDDATCRLFDLRADQEL-MTYSHDNIICGITSVSFSK 280 (340)
T ss_dssp TTSCEEEEETTTCS-EEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEEE-EEECCTTCCSCEEEEEECT
T ss_pred CCCcEEEEECCCCe-eEEEEcCCcCCEEEEEEcCCCC-EEEEEcCCCcEEEEECCCCcEE-EEEccCCcccceEEEEECC
Confidence 99999999999866 4788899999999999999998 7999999999999999987633 3333 2335799999999
Q ss_pred ccCCeEEEeecCCcEEEEecCCC
Q 021121 291 LVEGLLASTGWDELVYVWQQGMD 313 (317)
Q Consensus 291 ~~~~~l~s~~~dg~i~~w~~~~~ 313 (317)
+ +.+|++|+.||.|++||+...
T Consensus 281 ~-g~~l~~g~~d~~i~vwd~~~~ 302 (340)
T 1got_B 281 S-GRLLLAGYDDFNCNVWDALKA 302 (340)
T ss_dssp T-SSEEEEEETTSEEEEEETTTC
T ss_pred C-CCEEEEECCCCeEEEEEcccC
Confidence 9 899999999999999998764
No 47
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=5.4e-43 Score=287.25 Aligned_cols=287 Identities=16% Similarity=0.276 Sum_probs=243.5
Q ss_pred cCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeE
Q 021121 6 TPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSV 85 (317)
Q Consensus 6 ~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 85 (317)
+..+|.+++|+| ++++++.+.. ++.+..|..... ...+....|...|++++|+|++ .++++++ ||.|
T Consensus 8 ~~~~v~~~~~s~--dg~~~~~~~~------~~~~~~~~~~~~---~~~~~~~~h~~~v~~~~~~~~~-~~l~~~~-dg~i 74 (337)
T 1gxr_A 8 GSKPAYSFHVTA--DGQMQPVPFP------PDALIGPGIPRH---ARQINTLNHGEVVCAVTISNPT-RHVYTGG-KGCV 74 (337)
T ss_dssp EEEECCEEEECS--SSCEEECCCC------TTSSSSTTCCSE---EEEEEEECCSSCCCEEEECSSS-SEEEEEC-BSEE
T ss_pred cCCceeEEEECC--CCCEEEeecC------CCcEeccccCCc---cccceeccCCCceEEEEEecCC-cEEEEcC-CCeE
Confidence 456789999999 6777766554 455555543322 3344555899999999999998 5888888 9999
Q ss_pred EEEEeCCCCCCCCceeec--cCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCc--eeEEeeccccceEEEEEecCC
Q 021121 86 KIYDTALPPTANPIRSLH--EHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPT--SVRTFKEHAYCVYNATWNPRH 161 (317)
Q Consensus 86 ~v~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~ 161 (317)
++|++..+........+. .|...|.+++|+|+++ ++++++.||.|++||+++++ ....+..|...+.+++|+|+
T Consensus 75 ~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~- 152 (337)
T 1gxr_A 75 KVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGC-TLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPD- 152 (337)
T ss_dssp EEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSS-EEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTT-
T ss_pred EEEECCCCCceeeeecccccCCCCcEEEEEEcCCCC-EEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCC-
Confidence 999998765444555544 7899999999999988 99999999999999999887 56677788999999999998
Q ss_pred CCeEEEEeCCCeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEecCCCceeE
Q 021121 162 SDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRK 241 (317)
Q Consensus 162 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~v~~ 241 (317)
++++++++.||.|++||+++++....+..|...+.+++|+| +++++++++.|+.|++||+++.+. +..+ .+...+.+
T Consensus 153 ~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~~~d~~~~~~-~~~~-~~~~~v~~ 229 (337)
T 1gxr_A 153 SKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISN-DGTKLWTGGLDNTVRSWDLREGRQ-LQQH-DFTSQIFS 229 (337)
T ss_dssp SSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEE-EEEE-ECSSCEEE
T ss_pred CCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECC-CCCEEEEEecCCcEEEEECCCCce-Eeee-cCCCceEE
Confidence 89999999999999999999998999999999999999999 999999999999999999998653 4444 47788999
Q ss_pred EEecCCCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEeecCCcEEEEecCCCC
Q 021121 242 VKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGMDP 314 (317)
Q Consensus 242 ~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~ 314 (317)
++|+|+++ +|++++.++.|++||+++.+ ...+..|...|.+++|+|+ +.+|++++.||.|++|++....
T Consensus 230 ~~~s~~~~-~l~~~~~~~~i~~~~~~~~~--~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~~~~~~~~~ 298 (337)
T 1gxr_A 230 LGYCPTGE-WLAVGMESSNVEVLHVNKPD--KYQLHLHESCVLSLKFAYC-GKWFVSTGKDNLLNAWRTPYGA 298 (337)
T ss_dssp EEECTTSS-EEEEEETTSCEEEEETTSSC--EEEECCCSSCEEEEEECTT-SSEEEEEETTSEEEEEETTTCC
T ss_pred EEECCCCC-EEEEEcCCCcEEEEECCCCC--eEEEcCCccceeEEEECCC-CCEEEEecCCCcEEEEECCCCe
Confidence 99999998 79999999999999998876 3467789999999999998 7899999999999999998653
No 48
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.5e-42 Score=281.93 Aligned_cols=250 Identities=26% Similarity=0.422 Sum_probs=221.2
Q ss_pred eecCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEE
Q 021121 56 AFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWT 135 (317)
Q Consensus 56 ~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd 135 (317)
..+|...|++++|+|++ .+|++|+.||.|++|++..+ +....+.+|...|.+++|+|+++ +|++++.||.|++||
T Consensus 19 ~~gh~~~v~~~~~s~~~-~~l~s~~~dg~i~iw~~~~~---~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~d~~i~vwd 93 (312)
T 4ery_A 19 LAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDG---KFEKTISGHKLGISDVAWSSDSN-LLVSASDDKTLKIWD 93 (312)
T ss_dssp ECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTC---CEEEEECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEE
T ss_pred EcccCCcEEEEEECCCC-CEEEEeeCCCeEEEEeCCCc---ccchhhccCCCceEEEEEcCCCC-EEEEECCCCEEEEEE
Confidence 34789999999999998 69999999999999998765 66777889999999999999998 999999999999999
Q ss_pred cCCCceeEEeeccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEecCC
Q 021121 136 VDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDK 215 (317)
Q Consensus 136 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~ 215 (317)
+++++.+..+..|...|.+++|+|+ ++++++++.|+.|++||+++++.+..+..|..++.+++|+| +++++++++.|+
T Consensus 94 ~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~ 171 (312)
T 4ery_A 94 VSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR-DGSLIVSSSYDG 171 (312)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECSS-SSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTS
T ss_pred CCCCcEEEEEcCCCCCEEEEEEcCC-CCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcC-CCCEEEEEeCCC
Confidence 9999999999999999999999998 89999999999999999999999999999999999999999 999999999999
Q ss_pred cEEEEEccCCCccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeecccceeE--eEEEEeccC
Q 021121 216 SIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAV--GVDMSVLVE 293 (317)
Q Consensus 216 ~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~--~~~~~~~~~ 293 (317)
.|++||+++.+........+...+..++|+|+++ +|++++.|+.|++||+++++ ....+.+|..... ...+++.++
T Consensus 172 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 249 (312)
T 4ery_A 172 LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK-YILAATLDNTLKLWDYSKGK-CLKTYTGHKNEKYCIFANFSVTGG 249 (312)
T ss_dssp CEEEEETTTCCEEEEECCSSCCCEEEEEECTTSS-EEEEEETTTEEEEEETTTTE-EEEEECSSCCSSSCCCEEEECSSS
T ss_pred cEEEEECCCCceeeEEeccCCCceEEEEECCCCC-EEEEEcCCCeEEEEECCCCc-EEEEEEecCCceEEEEEEEEeCCC
Confidence 9999999987653333455677899999999998 69999999999999999876 5567777765443 335565547
Q ss_pred CeEEEeecCCcEEEEecCCCC
Q 021121 294 GLLASTGWDELVYVWQQGMDP 314 (317)
Q Consensus 294 ~~l~s~~~dg~i~~w~~~~~~ 314 (317)
.+|++|+.||.|++||+....
T Consensus 250 ~~l~sg~~dg~i~vwd~~~~~ 270 (312)
T 4ery_A 250 KWIVSGSEDNLVYIWNLQTKE 270 (312)
T ss_dssp CEEEECCTTSCEEEEETTTCC
T ss_pred cEEEEECCCCEEEEEECCCch
Confidence 899999999999999997653
No 49
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4e-43 Score=298.45 Aligned_cols=289 Identities=11% Similarity=0.169 Sum_probs=229.8
Q ss_pred cCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCC---CCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcC
Q 021121 6 TPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSP---AAPALTELVAFDTADGVYDLAWSESHDSLLIAAVAD 82 (317)
Q Consensus 6 ~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 82 (317)
|...|++++|+|. ++.++++++. ||.|++||+.. .. .......+.|...|.+++|+|++ .+|++|+.|
T Consensus 62 h~~~V~~~~~s~~-~~~~l~s~s~------dg~v~vwd~~~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~d 132 (437)
T 3gre_A 62 EPNSITSSAVSPG-ETPYLITGSD------QGVIKIWNLKEIIVGE-VYSSSLTYDCSSTVTQITMIPNF-DAFAVSSKD 132 (437)
T ss_dssp TTSCEEEEEEECS-SSCEEEEEET------TSEEEEEEHHHHHTTC-CCSCSEEEECSSCEEEEEECTTS-SEEEEEETT
T ss_pred CCCceEEEEECCC-CCCEEEEecC------CceEEEeECcccccCc-ccceeeeccCCCCEEEEEEeCCC-CEEEEEeCC
Confidence 5689999999993 2445555554 99999999976 32 12233444689999999999987 699999999
Q ss_pred CeEEEEEeCCCCCCCCceeec----------c--CCcceEEEE--EecCCCCEEEEEcCCCEEEEEEcCCCceeEEeec-
Q 021121 83 GSVKIYDTALPPTANPIRSLH----------E--HTREVHSAD--YNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKE- 147 (317)
Q Consensus 83 g~i~v~~~~~~~~~~~~~~~~----------~--~~~~v~~~~--~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~- 147 (317)
|.|++||+......+...... . +...+.++. +++++. ++++++.||.|++||+++++.+..+..
T Consensus 133 g~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 211 (437)
T 3gre_A 133 GQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKS-LLVALTNLSRVIIFDIRTLERLQIIENS 211 (437)
T ss_dssp SEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCE-EEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred CEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCC-EEEEEeCCCeEEEEeCCCCeeeEEEccC
Confidence 999999995211112222221 1 455666766 456776 999999999999999999999999987
Q ss_pred -cccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeec-cCccceEEEEecCC---CCcEEEEEecCCcEEEEEc
Q 021121 148 -HAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIP-AHEFEILACDWNKY---DDCLIASASVDKSIKIWDV 222 (317)
Q Consensus 148 -~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~v~~i~~~~~---~~~~l~~~~~d~~i~v~d~ 222 (317)
|...|++++|+|+ +.++++++.||.|++||+++++.+..+. .|..+|.+++|+|. ++.+|++++.|+.|++||+
T Consensus 212 ~h~~~v~~~~~s~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~ 290 (437)
T 3gre_A 212 PRHGAVSSICIDEE-CCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNF 290 (437)
T ss_dssp GGGCCEEEEEECTT-SCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEET
T ss_pred CCCCceEEEEECCC-CCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEc
Confidence 8899999999999 8999999999999999999988888775 67889999966651 6789999999999999999
Q ss_pred cCCCccEEEEec--------------------------CCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeee
Q 021121 223 RNYRVPIAVLNG--------------------------HGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRY 276 (317)
Q Consensus 223 ~~~~~~~~~~~~--------------------------~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~ 276 (317)
++++. +..+.+ |...|++++|+ +++ +|++++.|+.|++||+.+++.. ..+
T Consensus 291 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~-~l~s~~~d~~i~~wd~~~~~~~-~~~ 366 (437)
T 3gre_A 291 VKGHC-QYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDK-ILLTDEATSSIVMFSLNELSSS-KAV 366 (437)
T ss_dssp TTTEE-EEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTE-EEEEEGGGTEEEEEETTCGGGC-EEE
T ss_pred CCCcE-EEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-Cce-EEEecCCCCeEEEEECCCcccc-eEE
Confidence 87663 444442 55668889999 555 7999999999999999987633 333
Q ss_pred ec-------------------------------------ccceeEeEEEEec-cCCeEEEeecCCcEEEEe
Q 021121 277 DH-------------------------------------HTEFAVGVDMSVL-VEGLLASTGWDELVYVWQ 309 (317)
Q Consensus 277 ~~-------------------------------------~~~~v~~~~~~~~-~~~~l~s~~~dg~i~~w~ 309 (317)
.+ |...|++++|+++ ++.+|++|+.||.|++|+
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 367 ISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp ECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred ecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 32 8899999999997 345999999999999995
No 50
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=6.1e-43 Score=288.08 Aligned_cols=250 Identities=25% Similarity=0.428 Sum_probs=212.5
Q ss_pred cCCC-CeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEc
Q 021121 58 DTAD-GVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTV 136 (317)
Q Consensus 58 ~~~~-~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~ 136 (317)
.|.. .|.+++|+|++ .+|++|+.|+.|++||+..+..........+|...|.+++|+|+++ +|++|+.|+.+++||+
T Consensus 13 ~h~~~~v~~l~~sp~g-~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~-~l~s~s~D~~v~iw~~ 90 (345)
T 3fm0_A 13 AHPDSRCWFLAWNPAG-TLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGN-YLASASFDATTCIWKK 90 (345)
T ss_dssp CSTTSCEEEEEECTTS-SCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSS-EEEEEETTSCEEEEEE
T ss_pred CCCCCcEEEEEECCCC-CEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCC-EEEEEECCCcEEEEEc
Confidence 5666 89999999998 6999999999999999976411111223368999999999999998 9999999999999999
Q ss_pred CCC--ceeEEeeccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCc---eeeeccCccceEEEEecCCCCcEEEEE
Q 021121 137 DRP--TSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGS---TMIIPAHEFEILACDWNKYDDCLIASA 211 (317)
Q Consensus 137 ~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~---~~~~~~~~~~v~~i~~~~~~~~~l~~~ 211 (317)
.++ +.+..+.+|...|.+++|+|+ +++|++++.|+.|++||++++.. +..+..|...|.+++|+| ++++|+++
T Consensus 91 ~~~~~~~~~~~~~h~~~v~~v~~sp~-~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p-~~~~l~s~ 168 (345)
T 3fm0_A 91 NQDDFECVTTLEGHENEVKSVAWAPS-GNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHP-SQELLASA 168 (345)
T ss_dssp CCC-EEEEEEECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECS-SSSCEEEE
T ss_pred cCCCeEEEEEccCCCCCceEEEEeCC-CCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECC-CCCEEEEE
Confidence 876 456788899999999999998 89999999999999999987643 456678999999999999 99999999
Q ss_pred ecCCcEEEEEccCCC-ccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEeccccc--------------ceeeee
Q 021121 212 SVDKSIKIWDVRNYR-VPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVED--------------ALVGRY 276 (317)
Q Consensus 212 ~~d~~i~v~d~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~--------------~~~~~~ 276 (317)
+.|+.|++||.+..+ .+...+.+|...|++++|+|+++ +|++++.|++|++||..... .++..+
T Consensus 169 s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~-~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (345)
T 3fm0_A 169 SYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQ-RLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTL 247 (345)
T ss_dssp ETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEE
T ss_pred eCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCC-EEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEe
Confidence 999999999998764 23567889999999999999998 79999999999999974322 112233
Q ss_pred ec-ccceeEeEEEEeccCCeEEEeecCCcEEEEecCCC
Q 021121 277 DH-HTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGMD 313 (317)
Q Consensus 277 ~~-~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~ 313 (317)
.+ |...|.+++|+|+ +..|++++.|+.|++|+....
T Consensus 248 ~~~h~~~v~~v~~~~~-~~~l~s~~~d~~i~vw~~~~~ 284 (345)
T 3fm0_A 248 SGFHSRTIYDIAWCQL-TGALATACGDDAIRVFQEDPN 284 (345)
T ss_dssp CSSCSSCEEEEEECTT-TCCEEEEETTSCEEEEEECTT
T ss_pred cCCCCCcEEEEEEecC-CCEEEEEeCCCeEEEEEeCCC
Confidence 33 8889999999998 789999999999999998653
No 51
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=3.3e-41 Score=274.59 Aligned_cols=284 Identities=19% Similarity=0.296 Sum_probs=232.8
Q ss_pred CcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeEE
Q 021121 7 PFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVK 86 (317)
Q Consensus 7 ~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 86 (317)
.....+|+||| ++.++ ++. |++|+|||+.+++ ....+....|...|++++|+|++ .+|++|+.||.|+
T Consensus 25 d~y~~~l~WS~--~~~lA-vg~-------D~tV~iWd~~tg~-~~~~~~~~~~~~~V~~v~~~~~~-~~l~sgs~Dg~v~ 92 (318)
T 4ggc_A 25 DYYLNLVDWSS--GNVLA-VAL-------DNSVYLWSASSGD-ILQLLQMEQPGEYISSVAWIKEG-NYLAVGTSSAEVQ 92 (318)
T ss_dssp CTTCBCEEECT--TSEEE-EEE-------TTEEEEEETTTCC-EEEEEECCSTTCCEEEEEECTTS-SEEEEEETTSEEE
T ss_pred cccceEEEECC--CCEEE-EEe-------CCEEEEEECCCCC-EEEEEEecCCCCeEEEEEECCCC-CEEEEEECCCcEE
Confidence 33456799999 56544 443 8899999998765 23334444688889999999998 6999999999999
Q ss_pred EEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCC-ceeEEeeccccceEEEEEecCCCCeE
Q 021121 87 IYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRP-TSVRTFKEHAYCVYNATWNPRHSDVF 165 (317)
Q Consensus 87 v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l 165 (317)
+|+++++ +.+..+.+|...+.++.+. +. .+++++.++.+++|+.... ..+..+..|...+..+.+.++ ++++
T Consensus 93 iw~~~~~---~~~~~~~~h~~~~~~~~~~--~~-~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l 165 (318)
T 4ggc_A 93 LWDVQQQ---KRLRNMTSHSARVGSLSWN--SY-ILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPD-GRHL 165 (318)
T ss_dssp EEETTTT---EEEEEEECCSSCEEEEEEE--TT-EEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTT-SSEE
T ss_pred EeecCCc---eeEEEecCccceEEEeecC--CC-EEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCC-CCEE
Confidence 9999876 7788888999998877665 34 8999999999999998876 455677889999999999998 8999
Q ss_pred EEEeCCCeEEEEeCCCCCc----eeeeccCccceEEEEecCCCCcEE--EEEecCCcEEEEEccCCCccEEEEecCCCce
Q 021121 166 CSASGDCTLRIWDVREMGS----TMIIPAHEFEILACDWNKYDDCLI--ASASVDKSIKIWDVRNYRVPIAVLNGHGYAV 239 (317)
Q Consensus 166 ~~~~~dg~i~i~d~~~~~~----~~~~~~~~~~v~~i~~~~~~~~~l--~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~v 239 (317)
++++.||.|++||+++++. ......+...+.+++++|.....+ ++++.++.|++||.+.... .....+...+
T Consensus 166 ~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~--~~~~~~~~~v 243 (318)
T 4ggc_A 166 ASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGAC--LSAVDAHSQV 243 (318)
T ss_dssp EEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCE--EEEEECSSCE
T ss_pred EEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccc--cccccceeee
Confidence 9999999999999988653 334456778899999999556555 4566789999999988653 3344567789
Q ss_pred eEEEecCCCCeeEEe-eecCCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEeecCCcEEEEecCCC
Q 021121 240 RKVKFSPHRRNLLAS-CSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGMD 313 (317)
Q Consensus 240 ~~~~~~~~~~~~l~~-~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~ 313 (317)
..+.|+|+++.++++ |+.|+.|++||+++++ ++..+.+|.+.|++++|+|+ +.+|+||+.||+|++||+...
T Consensus 244 ~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~-~~~~l~gH~~~V~~l~~spd-g~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 244 CSILWSPHYKELISGHGFAQNQLVIWKYPTMA-KVAELKGHTSRVLSLTMSPD-GATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp EEEEEETTTTEEEEEECTTTCCEEEEETTTCC-EEEEECCCSSCEEEEEECTT-SSCEEEEETTTEEEEECCSCC
T ss_pred eeeeecccccceEEEEEcCCCEEEEEECCCCc-EEEEEcCCCCCEEEEEEcCC-CCEEEEEecCCeEEEEECCCC
Confidence 999999999864433 3479999999999886 66889999999999999999 889999999999999999653
No 52
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.3e-43 Score=288.59 Aligned_cols=252 Identities=23% Similarity=0.316 Sum_probs=209.3
Q ss_pred ecCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecC--CCCEEEEEcCCCEEEEE
Q 021121 57 FDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPT--RRDSFITSSWDDTVKLW 134 (317)
Q Consensus 57 ~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~l~~~~~dg~v~iw 134 (317)
.+|...|++++|+|++ .+|++|+.|++|++||+..+ ....+..+.+|..+|.+++|+++ +. +|++|+.|++|++|
T Consensus 10 ~~H~~~V~~v~~s~~g-~~lasgs~D~~v~lwd~~~~-~~~~~~~l~gH~~~V~~v~~~~~~~~~-~l~s~s~D~~v~iW 86 (316)
T 3bg1_A 10 TSHEDMIHDAQMDYYG-TRLATCSSDRSVKIFDVRNG-GQILIADLRGHEGPVWQVAWAHPMYGN-ILASCSYDRKVIIW 86 (316)
T ss_dssp ----CCEEEEEECGGG-CEEEEEETTTEEEEEEEETT-EEEEEEEEECCSSCEEEEEECCGGGSS-CEEEEETTSCEEEE
T ss_pred ccccCeEEEeeEcCCC-CEEEEEeCCCeEEEEEecCC-CcEEEEEEcCCCccEEEEEeCCCCCCC-EEEEEECCCEEEEE
Confidence 3789999999999998 69999999999999999754 11245678899999999999863 55 89999999999999
Q ss_pred EcCCC--ceeEEeeccccceEEEEEecCC-CCeEEEEeCCCeEEEEeCCCCCc---eeeeccCccceEEEEecCCC----
Q 021121 135 TVDRP--TSVRTFKEHAYCVYNATWNPRH-SDVFCSASGDCTLRIWDVREMGS---TMIIPAHEFEILACDWNKYD---- 204 (317)
Q Consensus 135 d~~~~--~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~---~~~~~~~~~~v~~i~~~~~~---- 204 (317)
|++++ +....+.+|...|.+++|+|++ +.+|++++.|+.|++||++.... ...+..|...+.+++|+| +
T Consensus 87 d~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~ 165 (316)
T 3bg1_A 87 REENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAP-AVVPG 165 (316)
T ss_dssp CCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECC-CCCC-
T ss_pred ECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEcc-ccCCc
Confidence 99887 3566778899999999999973 67899999999999999987633 345567888999999998 4
Q ss_pred -------------CcEEEEEecCCcEEEEEccCCC--ccEEEEecCCCceeEEEecCCC---CeeEEeeecCCeEEEEec
Q 021121 205 -------------DCLIASASVDKSIKIWDVRNYR--VPIAVLNGHGYAVRKVKFSPHR---RNLLASCSYDMTVCLWDF 266 (317)
Q Consensus 205 -------------~~~l~~~~~d~~i~v~d~~~~~--~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~~~d~~i~vwd~ 266 (317)
+++|++|+.|+.|++||++... .+...+.+|...|++++|+|++ ..+|++++.|++|++|++
T Consensus 166 ~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~ 245 (316)
T 3bg1_A 166 SLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTC 245 (316)
T ss_dssp -----CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEEC
T ss_pred cccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEc
Confidence 4689999999999999997543 2456678999999999999986 237999999999999998
Q ss_pred ccc---cceeeeeecccceeEeEEEEeccCCeEEEeecCCcEEEEecCCC
Q 021121 267 MVE---DALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGMD 313 (317)
Q Consensus 267 ~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~ 313 (317)
.+. +.....+..|...|.+++|+|+ +.+|++++.||.|++|+....
T Consensus 246 ~~~~~~~~~~~~~~~~~~~v~~v~~sp~-g~~las~~~D~~v~lw~~~~~ 294 (316)
T 3bg1_A 246 DDASSNTWSPKLLHKFNDVVWHVSWSIT-ANILAVSGGDNKVTLWKESVD 294 (316)
T ss_dssp SSTTCCCCBCCEEEECSSCEEEEEECTT-TCCEEEEESSSCEEEEEECTT
T ss_pred cCccccchhhhhhhcCCCcEEEEEEcCC-CCEEEEEcCCCeEEEEEECCC
Confidence 763 1123345678899999999999 789999999999999998643
No 53
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=4.7e-42 Score=279.72 Aligned_cols=246 Identities=21% Similarity=0.314 Sum_probs=215.6
Q ss_pred cCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCC--CCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEE
Q 021121 58 DTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPT--ANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWT 135 (317)
Q Consensus 58 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd 135 (317)
+|.+.|++++|+|+++.+|++|+.|++|++|++..... ..++..+.+|...|.+++|+|++. ++++++.|+.|++||
T Consensus 15 gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~-~l~s~s~D~~v~~wd 93 (319)
T 3frx_A 15 GHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGA-YALSASWDKTLRLWD 93 (319)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSS-EEEEEETTSEEEEEE
T ss_pred cccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCC-EEEEEeCCCEEEEEE
Confidence 79999999999998767999999999999999874321 234667889999999999999998 999999999999999
Q ss_pred cCCCceeEEeeccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeeccCccceEEEEecCC-----CCcEEEE
Q 021121 136 VDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKY-----DDCLIAS 210 (317)
Q Consensus 136 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~-----~~~~l~~ 210 (317)
+++++.+..+.+|...|.+++|+|+ +.++++++.|+.|++||++ ++.+..+.+|...+.++++.|. ++..+++
T Consensus 94 ~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s 171 (319)
T 3frx_A 94 VATGETYQRFVGHKSDVMSVDIDKK-ASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIIS 171 (319)
T ss_dssp TTTTEEEEEEECCSSCEEEEEECTT-SCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC------CCEEEE
T ss_pred CCCCCeeEEEccCCCcEEEEEEcCC-CCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEE
Confidence 9999999999999999999999998 8999999999999999996 4567778889999999999983 2348999
Q ss_pred EecCCcEEEEEccCCCccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEEe
Q 021121 211 ASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSV 290 (317)
Q Consensus 211 ~~~d~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~ 290 (317)
++.|+.|++||+++.+ ....+.+|...|++++|+|+++ +|++++.||.|++||+.+.+ .+..+.. ...|.+++|+|
T Consensus 172 ~~~d~~i~~wd~~~~~-~~~~~~~h~~~v~~~~~sp~g~-~l~s~~~dg~i~iwd~~~~~-~~~~~~~-~~~v~~~~~sp 247 (319)
T 3frx_A 172 AGNDKMVKAWNLNQFQ-IEADFIGHNSNINTLTASPDGT-LIASAGKDGEIMLWNLAAKK-AMYTLSA-QDEVFSLAFSP 247 (319)
T ss_dssp EETTSCEEEEETTTTE-EEEEECCCCSCEEEEEECTTSS-EEEEEETTCEEEEEETTTTE-EEEEEEC-CSCEEEEEECS
T ss_pred EeCCCEEEEEECCcch-hheeecCCCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCc-EEEEecC-CCcEEEEEEcC
Confidence 9999999999999865 4677889999999999999998 79999999999999999876 4455554 46799999999
Q ss_pred ccCCeEEEeecCCcEEEEecCC
Q 021121 291 LVEGLLASTGWDELVYVWQQGM 312 (317)
Q Consensus 291 ~~~~~l~s~~~dg~i~~w~~~~ 312 (317)
+ +.+|++++.+ .+++|+++.
T Consensus 248 ~-~~~la~~~~~-~i~v~~~~~ 267 (319)
T 3frx_A 248 N-RYWLAAATAT-GIKVFSLDP 267 (319)
T ss_dssp S-SSEEEEEETT-EEEEEEETT
T ss_pred C-CCEEEEEcCC-CcEEEEeCc
Confidence 8 7788877755 599999864
No 54
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=3e-43 Score=293.67 Aligned_cols=250 Identities=20% Similarity=0.373 Sum_probs=219.5
Q ss_pred eecCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEE
Q 021121 56 AFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWT 135 (317)
Q Consensus 56 ~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd 135 (317)
..+|.+.|++++|+|++ .+|++|+.||+|++||+.++ .....+..|...|.+++|+|++. ++++|+.|+.+++||
T Consensus 62 l~gH~~~V~~~~~sp~~-~~l~s~s~D~~v~iWd~~~~---~~~~~~~~h~~~v~~~~~s~~g~-~las~~~d~~v~iw~ 136 (380)
T 3iz6_a 62 LQGHSGKVYSLDWTPEK-NWIVSASQDGRLIVWNALTS---QKTHAIKLHCPWVMECAFAPNGQ-SVACGGLDSACSIFN 136 (380)
T ss_dssp ECCCSSCEEEEEECTTS-SCEEEEETTSEEEEEETTTT---EEEEEEECCCTTCCCCEECTTSS-EEEECCSSSCCEEEE
T ss_pred ccccccEEEEEEEcCCC-CEEEEEeCCCeEEEEECCCC---ccceEEecCCCCEEEEEECCCCC-EEEEeeCCCcEEEEE
Confidence 34799999999999998 69999999999999998766 67778889999999999999998 999999999999999
Q ss_pred cCCCc-------eeEEeeccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeee-----ccCccceEEEEecCC
Q 021121 136 VDRPT-------SVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMII-----PAHEFEILACDWNKY 203 (317)
Q Consensus 136 ~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-----~~~~~~v~~i~~~~~ 203 (317)
+.+.. ....+.+|.+.+.++.|.|+++..+++++.|++|++||+++++.+..+ .+|...+.++++++.
T Consensus 137 ~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 216 (380)
T 3iz6_a 137 LSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSL 216 (380)
T ss_dssp CCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSS
T ss_pred CCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecC
Confidence 97532 345677899999999999986778999999999999999999887766 568889999999887
Q ss_pred CCcEEEEEecCCcEEEEEccCCCccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeecc----
Q 021121 204 DDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHH---- 279 (317)
Q Consensus 204 ~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~---- 279 (317)
+++++++|+.|+.|++||++....++..+.+|...|++++|+|+++ +|++|+.|++|++||+++++. +..+..+
T Consensus 217 ~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s~D~~i~lwd~~~~~~-~~~~~~~~~~~ 294 (380)
T 3iz6_a 217 NANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQ-RFGTGSDDGTCRLFDMRTGHQ-LQVYNREPDRN 294 (380)
T ss_dssp SCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSS-EEEEECSSSCEEEEETTTTEE-EEEECCCCSSS
T ss_pred CCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCC-eEEEEcCCCeEEEEECCCCcE-EEEeccccccc
Confidence 8899999999999999999866566888999999999999999998 799999999999999998763 3333332
Q ss_pred ---cceeEeEEEEeccCCeEEEeecCCcEEEEecCCC
Q 021121 280 ---TEFAVGVDMSVLVEGLLASTGWDELVYVWQQGMD 313 (317)
Q Consensus 280 ---~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~ 313 (317)
...|++++|+|+ +.+|++|+.||.|++||+...
T Consensus 295 ~~~~~~v~~~~~s~~-g~~l~~g~~dg~i~vwd~~~~ 330 (380)
T 3iz6_a 295 DNELPIVTSVAFSIS-GRLLFAGYSNGDCYVWDTLLA 330 (380)
T ss_dssp CCSSCSCSEEEECSS-SSEEEEECTTSCEEEEETTTC
T ss_pred ccccCceEEEEECCC-CCEEEEEECCCCEEEEECCCC
Confidence 234899999999 889999999999999998654
No 55
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1e-42 Score=292.82 Aligned_cols=290 Identities=16% Similarity=0.300 Sum_probs=236.0
Q ss_pred eeEEEEecCCCCeEEEE-EecccccccCceEEEEecCCCCCcceeee-eecCCCCeeEEEecC-CCCCeEEEEEcCCeEE
Q 021121 10 GYSVKFSPFYESRLAVA-TAQNFGILGNGRVHVLDLSPAAPALTELV-AFDTADGVYDLAWSE-SHDSLLIAAVADGSVK 86 (317)
Q Consensus 10 v~~~~~~p~~~~~~~~~-~~~~~~~~~~g~i~i~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~-~~~~~l~~~~~dg~i~ 86 (317)
...++++| +...+++ ++. +|.|+||++........... ...|...|++++|+| ++ .+|++|+.||.|+
T Consensus 37 ~~~~~~~~--~~~~~~~~~~~------~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~-~~l~s~s~dg~v~ 107 (402)
T 2aq5_A 37 SGFCAVNP--KFMALICEASG------GGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHND-NVIASGSEDCTVM 107 (402)
T ss_dssp SCSEEECS--SEEEEEBCCSS------SCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCT-TEEEEEETTSEEE
T ss_pred CCcEEECC--CeEEEEEEEcC------CCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCC-CEEEEEeCCCeEE
Confidence 34577888 3433333 333 89999999976532212222 236899999999999 55 7999999999999
Q ss_pred EEEeCCCCCC----CCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEe--eccccceEEEEEecC
Q 021121 87 IYDTALPPTA----NPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTF--KEHAYCVYNATWNPR 160 (317)
Q Consensus 87 v~~~~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~--~~~~~~v~~~~~~~~ 160 (317)
+|++..+... .++..+.+|...|.+++|+|++..+|++++.||.|++||+++++.+..+ ..|...|.+++|+|+
T Consensus 108 vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 187 (402)
T 2aq5_A 108 VWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRD 187 (402)
T ss_dssp EEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTT
T ss_pred EEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCC
Confidence 9999865321 4567788999999999999998559999999999999999999999998 789999999999998
Q ss_pred CCCeEEEEeCCCeEEEEeCCCCCceeee-ccCccc-eEEEEecCCCCcEEEEE---ecCCcEEEEEccCCCccEEEEe-c
Q 021121 161 HSDVFCSASGDCTLRIWDVREMGSTMII-PAHEFE-ILACDWNKYDDCLIASA---SVDKSIKIWDVRNYRVPIAVLN-G 234 (317)
Q Consensus 161 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~-v~~i~~~~~~~~~l~~~---~~d~~i~v~d~~~~~~~~~~~~-~ 234 (317)
+.+|++++.||.|++||+++++.+..+ ..|... +.++.|+| ++.++++| +.|+.|++||+++.+.++.... .
T Consensus 188 -~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~ 265 (402)
T 2aq5_A 188 -GALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVS-EGKILTTGFSRMSERQVALWDTKHLEEPLSLQELD 265 (402)
T ss_dssp -SSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECS-TTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECC
T ss_pred -CCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcC-CCcEEEEeccCCCCceEEEEcCccccCCceEEecc
Confidence 889999999999999999999888887 677765 89999999 89999999 7899999999998775444433 5
Q ss_pred CCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeec--ccceeEeEEEEeccCCeEEEeecCCcEEEEecCC
Q 021121 235 HGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDH--HTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGM 312 (317)
Q Consensus 235 ~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~ 312 (317)
|...+.+++|+|+++.++++++.||.|++||+.+++..+..+.. |...|.+++|+|+ +.++++ .++.+++|++..
T Consensus 266 ~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~-~~~~~s--~~~~~~~~~l~~ 342 (402)
T 2aq5_A 266 TSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPK-RGLEVN--KCEIARFYKLHE 342 (402)
T ss_dssp CCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCG-GGSCGG--GTEEEEEEEEET
T ss_pred CCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEecc-ccccee--cceeEEEEEcCC
Confidence 77789999999999954456778999999999988753444444 4589999999998 666654 567999999876
Q ss_pred C
Q 021121 313 D 313 (317)
Q Consensus 313 ~ 313 (317)
.
T Consensus 343 ~ 343 (402)
T 2aq5_A 343 R 343 (402)
T ss_dssp T
T ss_pred C
Confidence 3
No 56
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.7e-41 Score=280.33 Aligned_cols=247 Identities=21% Similarity=0.300 Sum_probs=218.4
Q ss_pred ecCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEc
Q 021121 57 FDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTV 136 (317)
Q Consensus 57 ~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~ 136 (317)
.+|...|++++|+|++ .+|++|+.||+|++||.... .....+..|...|.+++|+|++. .+++++.|+.+++|++
T Consensus 61 ~gH~~~V~~~~~s~d~-~~l~s~s~Dg~v~vWd~~~~---~~~~~~~~~~~~v~~~~~sp~g~-~lasg~~d~~i~v~~~ 135 (354)
T 2pbi_B 61 KGHGNKVLCMDWCKDK-RRIVSSSQDGKVIVWDSFTT---NKEHAVTMPCTWVMACAYAPSGC-AIACGGLDNKCSVYPL 135 (354)
T ss_dssp ECCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTC---CEEEEEECSSSCCCEEEECTTSS-EEEEESTTSEEEEEEC
T ss_pred cCCCCeEEEEEECCCC-CEEEEEeCCCeEEEEECCCC---CcceEEecCCCCEEEEEECCCCC-EEEEeeCCCCEEEEEE
Confidence 4799999999999998 69999999999999998765 56667778899999999999998 9999999999999998
Q ss_pred CCC------ceeEEeeccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeeccCccceEEEEecCC-CCcEEE
Q 021121 137 DRP------TSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKY-DDCLIA 209 (317)
Q Consensus 137 ~~~------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~-~~~~l~ 209 (317)
... .....+..|...|.+++|+|+ +..+++++.|++|++||+++++.+..+.+|...+.+++++|. ++++|+
T Consensus 136 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~ 214 (354)
T 2pbi_B 136 TFDKNENMAAKKKSVAMHTNYLSACSFTNS-DMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFV 214 (354)
T ss_dssp CCCTTCCSGGGCEEEEECSSCEEEEEECSS-SSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEE
T ss_pred eccccccccccceeeeccCCcEEEEEEeCC-CCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEE
Confidence 653 345667789999999999998 889999999999999999999999999999999999999883 368999
Q ss_pred EEecCCcEEEEEccCCCccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeec--ccceeEeEE
Q 021121 210 SASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDH--HTEFAVGVD 287 (317)
Q Consensus 210 ~~~~d~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~--~~~~v~~~~ 287 (317)
+|+.|+.|++||+++++ ++..+.+|...|++++|+|++. +|++++.|++|++||++..+. ...+.. +...+.+++
T Consensus 215 sgs~Dg~v~~wd~~~~~-~~~~~~~h~~~v~~v~~~p~~~-~l~s~s~D~~v~lwd~~~~~~-~~~~~~~~~~~~~~~~~ 291 (354)
T 2pbi_B 215 SGGCDKKAMVWDMRSGQ-CVQAFETHESDVNSVRYYPSGD-AFASGSDDATCRLYDLRADRE-VAIYSKESIIFGASSVD 291 (354)
T ss_dssp EEETTSCEEEEETTTCC-EEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEE-EEEECCTTCCSCEEEEE
T ss_pred EEeCCCeEEEEECCCCc-EEEEecCCCCCeEEEEEeCCCC-EEEEEeCCCeEEEEECCCCcE-EEEEcCCCcccceeEEE
Confidence 99999999999999876 4788889999999999999998 799999999999999988753 333332 334789999
Q ss_pred EEeccCCeEEEeecCCcEEEEecCCC
Q 021121 288 MSVLVEGLLASTGWDELVYVWQQGMD 313 (317)
Q Consensus 288 ~~~~~~~~l~s~~~dg~i~~w~~~~~ 313 (317)
|+|+ +.+|++|+.|+.|++||+...
T Consensus 292 ~s~~-g~~l~~g~~d~~i~vwd~~~~ 316 (354)
T 2pbi_B 292 FSLS-GRLLFAGYNDYTINVWDVLKG 316 (354)
T ss_dssp ECTT-SSEEEEEETTSCEEEEETTTC
T ss_pred EeCC-CCEEEEEECCCcEEEEECCCC
Confidence 9998 889999999999999998654
No 57
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=6.6e-42 Score=289.40 Aligned_cols=282 Identities=15% Similarity=0.171 Sum_probs=231.9
Q ss_pred ceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeee-ecCCCCeeEEEecCCCCCeEEEEEcCCeEEE
Q 021121 9 NGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVA-FDTADGVYDLAWSESHDSLLIAAVADGSVKI 87 (317)
Q Consensus 9 ~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v 87 (317)
.+....|+| ++.++++++. +|.|++||+.... .... ..|...|++++|+|++ .+|++|+.|+.|++
T Consensus 99 ~~~~~~~~~--~~~~l~~~~~------dg~i~iwd~~~~~----~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~d~~i~i 165 (420)
T 3vl1_A 99 YTAVDTAKL--QMRRFILGTT------EGDIKVLDSNFNL----QREIDQAHVSEITKLKFFPSG-EALISSSQDMQLKI 165 (420)
T ss_dssp EEEEEEECS--SSCEEEEEET------TSCEEEECTTSCE----EEEETTSSSSCEEEEEECTTS-SEEEEEETTSEEEE
T ss_pred ceEEEEEec--CCCEEEEEEC------CCCEEEEeCCCcc----eeeecccccCccEEEEECCCC-CEEEEEeCCCeEEE
Confidence 344456788 5566666664 9999999988553 2223 3789999999999998 59999999999999
Q ss_pred EEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeec---cccceEEEEE-------
Q 021121 88 YDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKE---HAYCVYNATW------- 157 (317)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~---~~~~v~~~~~------- 157 (317)
||+..+ +....+.+|...|.+++|+|++. +|++++.||.|++||+++++.+..+.. +...+.+++|
T Consensus 166 wd~~~~---~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 241 (420)
T 3vl1_A 166 WSVKDG---SNPRTLIGHRATVTDIAIIDRGR-NVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQ 241 (420)
T ss_dssp EETTTC---CCCEEEECCSSCEEEEEEETTTT-EEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSS
T ss_pred EeCCCC---cCceEEcCCCCcEEEEEEcCCCC-EEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcce
Confidence 999876 67778889999999999999988 999999999999999999998888874 3445555555
Q ss_pred --------------ecCCCCeEEEEeCCCeEEEEeCCCCCceeeec-cCccceEEEEecCCCCc-EEEEEecCCcEEEEE
Q 021121 158 --------------NPRHSDVFCSASGDCTLRIWDVREMGSTMIIP-AHEFEILACDWNKYDDC-LIASASVDKSIKIWD 221 (317)
Q Consensus 158 --------------~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~v~~i~~~~~~~~-~l~~~~~d~~i~v~d 221 (317)
+|+ ++++++++.||.|++||+++++....+. .|...+.+++|+| ++. +|++++.||.|++||
T Consensus 242 ~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~g~~dg~i~vwd 319 (420)
T 3vl1_A 242 LHEISTSKKNNLEFGTY-GKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDG-NNANYIYAGYENGMLAQWD 319 (420)
T ss_dssp CGGGCCCCCCTTCSSCT-TEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECS-SCTTEEEEEETTSEEEEEE
T ss_pred eeecccCcccceEEcCC-CCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeC-CCCCEEEEEeCCCeEEEEE
Confidence 566 7899999999999999999988777664 4788999999999 776 999999999999999
Q ss_pred ccCCCccEEEEec-CCCceeEEEecCCCCeeEEeeecCCeEEEEecccccc--------eeeeeecccceeEeEEEEecc
Q 021121 222 VRNYRVPIAVLNG-HGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDA--------LVGRYDHHTEFAVGVDMSVLV 292 (317)
Q Consensus 222 ~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~--------~~~~~~~~~~~v~~~~~~~~~ 292 (317)
+++.+.++..+.. |...|.++.+. +++ +|++++.|+.|++||+...+. ....+..|...|.+++|+|+
T Consensus 320 ~~~~~~~~~~~~~~~~~~v~~~~~~-~~~-~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~- 396 (420)
T 3vl1_A 320 LRSPECPVGEFLINEGTPINNVYFA-AGA-LFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSD- 396 (420)
T ss_dssp TTCTTSCSEEEEESTTSCEEEEEEE-TTE-EEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECC-
T ss_pred cCCCcCchhhhhccCCCCceEEEeC-CCC-EEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccC-
Confidence 9988766667666 67788888665 565 799999999999999887421 12345678889999999999
Q ss_pred CC---eEEEeecCCcEEEEecCC
Q 021121 293 EG---LLASTGWDELVYVWQQGM 312 (317)
Q Consensus 293 ~~---~l~s~~~dg~i~~w~~~~ 312 (317)
+. .+++++.+|.+.+|+++.
T Consensus 397 ~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 397 DESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp SSSSCEEEEEETTTEEEEEESCC
T ss_pred CCCcceEEEEcCCceEEEEeccC
Confidence 56 677777899999999864
No 58
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-41 Score=277.90 Aligned_cols=246 Identities=23% Similarity=0.403 Sum_probs=203.9
Q ss_pred cCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceee-cc-CCcceEEEEEecCCCCEEEEEcCCCEEEEEE
Q 021121 58 DTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSL-HE-HTREVHSADYNPTRRDSFITSSWDDTVKLWT 135 (317)
Q Consensus 58 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~-~~-~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd 135 (317)
.|...|.+++|+|+ +|++|+.|+.|++|++..+ .......+ .. |...|.+++|+|++. +|++++.|+.|++||
T Consensus 12 ~h~~~v~~~~~s~~---~las~~~D~~i~lw~~~~~-~~~~~~~~~~~~h~~~v~~v~~sp~~~-~las~s~D~~v~iw~ 86 (330)
T 2hes_X 12 LYKEKIWSFDFSQG---ILATGSTDRKIKLVSVKYD-DFTLIDVLDETAHKKAIRSVAWRPHTS-LLAAGSFDSTVSIWA 86 (330)
T ss_dssp CCSSCEEEEEEETT---EEEEEESSSCEEEEECSSS-CCEEEEEECTTCCCSCEEEEEECTTSS-EEEEEETTSCEEEEE
T ss_pred cCCCceeeeccCCC---EEEEEcCCCEEEEEEecCC-CeEEEEEEecCCccCCEEEEEECCCCC-EEEEEeCCCcEEEEE
Confidence 68999999999975 8999999999999999754 12233344 34 999999999999988 999999999999999
Q ss_pred cCC-------CceeEEeeccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCC----CceeeeccCccceEEEEecCCC
Q 021121 136 VDR-------PTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREM----GSTMIIPAHEFEILACDWNKYD 204 (317)
Q Consensus 136 ~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~----~~~~~~~~~~~~v~~i~~~~~~ 204 (317)
++. .+.+..+.+|...|.+++|+|+ +++|++++.|+.|++||++.. +.+..+..|...|.+++|+| +
T Consensus 87 ~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~-g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p-~ 164 (330)
T 2hes_X 87 KEESADRTFEMDLLAIIEGHENEVKGVAWSND-GYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHP-S 164 (330)
T ss_dssp C-------CCCEEEEEEC----CEEEEEECTT-SCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECS-S
T ss_pred cccCcCccccceeEEEEcCCCCcEEEEEECCC-CCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECC-C
Confidence 853 3456678899999999999998 899999999999999999533 34567788999999999999 9
Q ss_pred CcEEEEEecCCcEEEEEccCCC-ccEEEEecCCCceeEEEecCC--CCeeEEeeecCCeEEEEeccccc-------ceee
Q 021121 205 DCLIASASVDKSIKIWDVRNYR-VPIAVLNGHGYAVRKVKFSPH--RRNLLASCSYDMTVCLWDFMVED-------ALVG 274 (317)
Q Consensus 205 ~~~l~~~~~d~~i~v~d~~~~~-~~~~~~~~~~~~v~~~~~~~~--~~~~l~~~~~d~~i~vwd~~~~~-------~~~~ 274 (317)
+.+|++++.|+.|++||.+... .++..+.+|...|.+++|+|+ +. +|++++.|++|++||+.... ....
T Consensus 165 ~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~-~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~ 243 (330)
T 2hes_X 165 EALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVF-RLCSGSDDSTVRVWKYMGDDEDDQQEWVCEA 243 (330)
T ss_dssp SSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSC-EEEEEETTSCEEEEEEEEECTTSCEEEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCee-EEEEEeCCCeEEEEEecCCCccccceeEEee
Confidence 9999999999999999988653 357788899999999999998 54 69999999999999997652 1233
Q ss_pred eeec-ccceeEeEEEEeccCCeEEEeecCCcEEEEecCCC
Q 021121 275 RYDH-HTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGMD 313 (317)
Q Consensus 275 ~~~~-~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~ 313 (317)
.+.. |...|.+++|++ +.+|++++.||.|++|+....
T Consensus 244 ~~~~~h~~~v~~v~~s~--~~~l~s~~~dg~v~iw~~~~~ 281 (330)
T 2hes_X 244 ILPDVHKRQVYNVAWGF--NGLIASVGADGVLAVYEEVDG 281 (330)
T ss_dssp ECCSCCSSCEEEEEECT--TSCEEEEETTSCEEEEEEETT
T ss_pred ecccccccceEEEEEcC--CCEEEEEeCCCEEEEEEcCCC
Confidence 3444 889999999996 458999999999999998653
No 59
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.2e-41 Score=290.00 Aligned_cols=291 Identities=15% Similarity=0.287 Sum_probs=227.0
Q ss_pred eecCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCC-------cceee-eeecCC------------CCe
Q 021121 4 FKTPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAP-------ALTEL-VAFDTA------------DGV 63 (317)
Q Consensus 4 ~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~-------~~~~~-~~~~~~------------~~v 63 (317)
+.+...|++++|+| ++.++++++. ||.|+||++..... ..... ....|. ..|
T Consensus 25 ~~~~~~V~~v~~s~--~g~~la~g~~------dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V 96 (447)
T 3dw8_B 25 VAEADIISTVEFNH--SGELLATGDK------GGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKI 96 (447)
T ss_dssp CCGGGSEEEEEECS--SSSEEEEEET------TSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCC
T ss_pred ccccCcEEEEEECC--CCCEEEEEcC------CCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCce
Confidence 44678999999999 6777777765 99999999986541 11112 222576 889
Q ss_pred eEEEecCCCC-CeEEEEEcCCeEEEEEeCCCCCC------------------------------------CCcee-eccC
Q 021121 64 YDLAWSESHD-SLLIAAVADGSVKIYDTALPPTA------------------------------------NPIRS-LHEH 105 (317)
Q Consensus 64 ~~~~~~~~~~-~~l~~~~~dg~i~v~~~~~~~~~------------------------------------~~~~~-~~~~ 105 (317)
++++|+|+++ .+|++++.|+.|++|++...... .+... ..+|
T Consensus 97 ~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h 176 (447)
T 3dw8_B 97 NKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAH 176 (447)
T ss_dssp CEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCC
T ss_pred EEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCC
Confidence 9999999863 48999999999999998753110 00011 3579
Q ss_pred CcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCC-ceeE-------EeeccccceEEEEEecCCCCeEEEEeCCCeEEEE
Q 021121 106 TREVHSADYNPTRRDSFITSSWDDTVKLWTVDRP-TSVR-------TFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIW 177 (317)
Q Consensus 106 ~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~-~~~~-------~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~ 177 (317)
...|.+++|+|++. +|++| .|+.|++||+++. +... .+..|...|.+++|+|++.+++++++.||.|++|
T Consensus 177 ~~~v~~~~~~~~~~-~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iw 254 (447)
T 3dw8_B 177 TYHINSISINSDYE-TYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLC 254 (447)
T ss_dssp SSCCCEEEECTTSS-EEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEE
T ss_pred CcceEEEEEcCCCC-EEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEE
Confidence 99999999999988 88998 7999999999843 3333 2457889999999999944999999999999999
Q ss_pred eCCCCCc----eeeeccCcc------------ceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEecCCCc---
Q 021121 178 DVREMGS----TMIIPAHEF------------EILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYA--- 238 (317)
Q Consensus 178 d~~~~~~----~~~~~~~~~------------~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~--- 238 (317)
|+++++. ...+..|.. .|.+++|+| ++++|++++. +.|++||+++...++..+..|...
T Consensus 255 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~ 332 (447)
T 3dw8_B 255 DMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSH-SGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSK 332 (447)
T ss_dssp ETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECT-TSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTT
T ss_pred ECcCCccccceeeEeccCCCccccccccccCceEEEEEECC-CCCEEEEeeC-CeEEEEeCCCCccccceeecccccccc
Confidence 9999876 677777775 899999999 9999999998 999999999744457777777532
Q ss_pred ------------eeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeee-----------------------------
Q 021121 239 ------------VRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYD----------------------------- 277 (317)
Q Consensus 239 ------------v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~----------------------------- 277 (317)
+..++|+|+++ +|++|+.||.|++||+.+++.. .+.
T Consensus 333 l~~~~~~~~i~~~~~~~~s~~~~-~l~s~s~dg~v~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (447)
T 3dw8_B 333 LCSLYENDCIFDKFECCWNGSDS-VVMTGSYNNFFRMFDRNTKRDI--TLEASRENNKPRTVLKPRKVCASGKRKKDEIS 409 (447)
T ss_dssp HHHHHHTSGGGCCCCEEECTTSS-EEEEECSTTEEEEEETTTCCEE--EEECCSTTCCTTCBCCCCCEECSSCCCTTCEE
T ss_pred ccccccccccccceEEEECCCCC-EEEEeccCCEEEEEEcCCCcce--eeeecccccccccccCCccccccCCccccccc
Confidence 23499999998 6899999999999999887632 111
Q ss_pred ----cccceeEeEEEEeccCCeEEEeecCCcEEEEecC
Q 021121 278 ----HHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQG 311 (317)
Q Consensus 278 ----~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~ 311 (317)
.+...|..++|+|+ +.+|++++.++ +++|.-.
T Consensus 410 ~~~~~~~~~i~~~~~~p~-~~~la~~~~~~-~~~~~~~ 445 (447)
T 3dw8_B 410 VDSLDFNKKILHTAWHPK-ENIIAVATTNN-LYIFQDK 445 (447)
T ss_dssp GGGCCTTSCCCEEEECSS-SSEEEEECSSC-EEEEECC
T ss_pred ccccccCCceeEEEECCC-CCEEEEEecce-eeeeccc
Confidence 23456889999999 78999888776 7888754
No 60
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.4e-41 Score=283.46 Aligned_cols=266 Identities=20% Similarity=0.346 Sum_probs=219.0
Q ss_pred eEEEEecCCCCC-cceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeeccC-----------
Q 021121 38 RVHVLDLSPAAP-ALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEH----------- 105 (317)
Q Consensus 38 ~i~i~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~----------- 105 (317)
...+|+...... .......++|...|.+++|+|++ .+|++|+ ++.+++|++..+ ..+..+..|
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fspdg-~~la~g~-~~~v~i~~~~~g---~~~~~l~~~~~~~~~~~~~~ 115 (393)
T 1erj_A 41 YYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDG-EYLATGC-NKTTQVYRVSDG---SLVARLSDDSAANKDPENLN 115 (393)
T ss_dssp CEEEECTTSCCCEEEEEEEEEECSSCCCEEEECTTS-SEEEEEC-BSCEEEEETTTC---CEEEEECC------------
T ss_pred eEEEECCCCCcccCceeEEecCCCCEEEEEEECCCC-CEEEEEc-CCcEEEEEecCC---CEEEEecCcccccccccccc
Confidence 344666543321 11223345799999999999998 5888876 688999999765 344444333
Q ss_pred -------CcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeeccccceEEEEEecCCCCeEEEEeCCCeEEEEe
Q 021121 106 -------TREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWD 178 (317)
Q Consensus 106 -------~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d 178 (317)
...|.+++|+|+++ +|++|+.|+.|++||+++++.+..+.+|...|.+++|+|+ +..|++++.|+.|++||
T Consensus 116 ~~~~~~~~~~v~~v~~s~dg~-~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~-~~~l~s~s~d~~v~iwd 193 (393)
T 1erj_A 116 TSSSPSSDLYIRSVCFSPDGK-FLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPS-GDKLVSGSGDRTVRIWD 193 (393)
T ss_dssp -----CCCCBEEEEEECTTSS-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTT-SSEEEEEETTSEEEEEE
T ss_pred ccccCCCceeEEEEEECCCCC-EEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCC-CCEEEEecCCCcEEEEE
Confidence 23499999999998 9999999999999999999999999999999999999999 88999999999999999
Q ss_pred CCCCCceeeeccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEE-------ecCCCceeEEEecCCCCee
Q 021121 179 VREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVL-------NGHGYAVRKVKFSPHRRNL 251 (317)
Q Consensus 179 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~~ 251 (317)
+++++....+. +...+.+++|+|.+++++++++.|+.|++||++++.. +..+ .+|...|.+++|+|+++ +
T Consensus 194 ~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~-~~~~~~~~~~~~~h~~~v~~v~~~~~g~-~ 270 (393)
T 1erj_A 194 LRTGQCSLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFL-VERLDSENESGTGHKDSVYSVVFTRDGQ-S 270 (393)
T ss_dssp TTTTEEEEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCE-EEEEC------CCCSSCEEEEEECTTSS-E
T ss_pred CCCCeeEEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcE-EEeecccccCCCCCCCCEEEEEECCCCC-E
Confidence 99988777765 5667999999997889999999999999999988653 4444 57889999999999998 7
Q ss_pred EEeeecCCeEEEEeccccc-----------ceeeeeecccceeEeEEEEeccCCeEEEeecCCcEEEEecCCCC
Q 021121 252 LASCSYDMTVCLWDFMVED-----------ALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGMDP 314 (317)
Q Consensus 252 l~~~~~d~~i~vwd~~~~~-----------~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~ 314 (317)
|++++.|+.|++||+++.. .+...+.+|...|.+++|+|+ +.+|++|+.||.|++||+....
T Consensus 271 l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~sgs~D~~v~iwd~~~~~ 343 (393)
T 1erj_A 271 VVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQN-DEYILSGSKDRGVLFWDKKSGN 343 (393)
T ss_dssp EEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGG-GCEEEEEETTSEEEEEETTTCC
T ss_pred EEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCC-CCEEEEEeCCCeEEEEECCCCe
Confidence 9999999999999997642 234567789999999999998 7899999999999999987653
No 61
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=4.2e-41 Score=276.75 Aligned_cols=281 Identities=12% Similarity=0.168 Sum_probs=236.3
Q ss_pred ecCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCC-eEEEEEcCC
Q 021121 5 KTPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDS-LLIAAVADG 83 (317)
Q Consensus 5 ~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~~dg 83 (317)
.|...|++++|+| ++.++++++. ||.|++|++..............|...|.+++|+|++ . +|++|+.||
T Consensus 9 ~h~~~v~~~~~s~--~~~~l~~~~~------d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~dg 79 (342)
T 1yfq_A 9 APKDYISDIKIIP--SKSLLLITSW------DGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNT-DLQIYVGTVQG 79 (342)
T ss_dssp CCSSCEEEEEEEG--GGTEEEEEET------TSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESS-SEEEEEEETTS
T ss_pred CCCCcEEEEEEcC--CCCEEEEEcC------CCeEEEEEeCCCCccccceeeeecCCceEEEEECCCC-CcEEEEEcCCC
Confidence 3778999999999 5555565554 9999999998776433444555889999999999997 7 899999999
Q ss_pred eEEEEEe-CCCCCCCCceeecc--CCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCC---------CceeEEeeccccc
Q 021121 84 SVKIYDT-ALPPTANPIRSLHE--HTREVHSADYNPTRRDSFITSSWDDTVKLWTVDR---------PTSVRTFKEHAYC 151 (317)
Q Consensus 84 ~i~v~~~-~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~---------~~~~~~~~~~~~~ 151 (317)
.|++||+ ... ....+.. |...|.+++|+| +. ++++++.|+.|++||+++ ++.+..+. |...
T Consensus 80 ~i~~wd~~~~~----~~~~~~~~~~~~~v~~l~~~~-~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~ 152 (342)
T 1yfq_A 80 EILKVDLIGSP----SFQALTNNEANLGICRICKYG-DD-KLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNK 152 (342)
T ss_dssp CEEEECSSSSS----SEEECBSCCCCSCEEEEEEET-TT-EEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCC
T ss_pred eEEEEEeccCC----ceEeccccCCCCceEEEEeCC-CC-EEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCc
Confidence 9999998 654 3466777 999999999999 66 999999999999999987 76666666 8889
Q ss_pred eEEEEEecCCCCeEEEEeCCCeEEEEeCCC-CCc--eeeeccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCC---
Q 021121 152 VYNATWNPRHSDVFCSASGDCTLRIWDVRE-MGS--TMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNY--- 225 (317)
Q Consensus 152 v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~--~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~--- 225 (317)
+.+++|+|+ . +++++.|+.|++||+++ +.. ......+...+.+++|+|.+++++++++.||.|++||++..
T Consensus 153 v~~~~~~~~-~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~ 229 (342)
T 1yfq_A 153 IFTMDTNSS-R--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDD 229 (342)
T ss_dssp EEEEEECSS-E--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCS
T ss_pred eEEEEecCC-c--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcc
Confidence 999999987 4 88999999999999998 543 33445678899999999845779999999999999999876
Q ss_pred --CccEEEEecCCC---------ceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeecc-cceeEeEEEEeccC
Q 021121 226 --RVPIAVLNGHGY---------AVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHH-TEFAVGVDMSVLVE 293 (317)
Q Consensus 226 --~~~~~~~~~~~~---------~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~-~~~v~~~~~~~~~~ 293 (317)
......+..|.. .|.+++|+|+++ +|++++.||.|++||+.+++ .+..+..| ...|.+++ |+ +
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~vwd~~~~~-~~~~~~~~h~~~v~~~~--~~-~ 304 (342)
T 1yfq_A 230 YNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHK-FLYTAGSDGIISCWNLQTRK-KIKNFAKFNEDSVVKIA--CS-D 304 (342)
T ss_dssp TTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTC-CEEEEETTSCEEEEETTTTE-EEEECCCCSSSEEEEEE--EC-S
T ss_pred cccccceeeecccccccccccceeEEEEEEcCCCC-EEEEecCCceEEEEcCccHh-HhhhhhcccCCCceEec--CC-C
Confidence 255777777765 999999999998 79999999999999999886 56778887 99999999 87 8
Q ss_pred CeEEEeecCCc-EEEEe
Q 021121 294 GLLASTGWDEL-VYVWQ 309 (317)
Q Consensus 294 ~~l~s~~~dg~-i~~w~ 309 (317)
.+|++++.||. .+.|.
T Consensus 305 ~~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 305 NILCLATSDDTFKTNAA 321 (342)
T ss_dssp SEEEEEEECTHHHHCSS
T ss_pred CeEEEEecCCccccccc
Confidence 89999999998 44444
No 62
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.7e-40 Score=267.89 Aligned_cols=252 Identities=19% Similarity=0.274 Sum_probs=206.7
Q ss_pred ecCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCC-CCCeEEEEEcCC
Q 021121 5 KTPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSES-HDSLLIAAVADG 83 (317)
Q Consensus 5 ~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~dg 83 (317)
.|...|++++|+| ++.++++++. |+.|+|||+....... .....+|.+.|.+++|+|+ ...+|++|+.|+
T Consensus 7 ~h~~~V~~~~~s~--~g~~las~s~------D~~v~iw~~~~~~~~~-~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~ 77 (297)
T 2pm7_B 7 AHNEMIHDAVMDY--YGKRMATCSS------DKTIKIFEVEGETHKL-IDTLTGHEGPVWRVDWAHPKFGTILASCSYDG 77 (297)
T ss_dssp SCSSCEEEEEECT--TSSEEEEEET------TSCEEEEEBCSSCBCC-CEEECCCSSCEEEEEECCGGGCSEEEEEETTT
T ss_pred CCcCceEEEEECC--CCCEEEEEeC------CCEEEEEecCCCCcEE-EEEEccccCCeEEEEecCCCcCCEEEEEcCCC
Confidence 3788999999999 5777777765 9999999997543111 1223379999999999864 236999999999
Q ss_pred eEEEEEeCCCCCCCCceeeccCCcceEEEEEecC--CCCEEEEEcCCCEEEEEEcCCCc--eeEEeeccccceEEEEEec
Q 021121 84 SVKIYDTALPPTANPIRSLHEHTREVHSADYNPT--RRDSFITSSWDDTVKLWTVDRPT--SVRTFKEHAYCVYNATWNP 159 (317)
Q Consensus 84 ~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~l~~~~~dg~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~ 159 (317)
+|++||+..+ ....+..+..|...|.+++|+|+ +. +|++++.|+.|++||++++. ....+..|...|.+++|+|
T Consensus 78 ~v~iWd~~~~-~~~~~~~~~~h~~~v~~v~~~p~~~g~-~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p 155 (297)
T 2pm7_B 78 KVMIWKEENG-RWSQIAVHAVHSASVNSVQWAPHEYGP-MLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAP 155 (297)
T ss_dssp EEEEEEBSSS-CBCCCEEECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECC
T ss_pred EEEEEEcCCC-ceEEEEEeecCCCceeEEEeCcCCCCc-EEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecC
Confidence 9999999764 22355667789999999999997 65 99999999999999998763 2456778999999999999
Q ss_pred CC------------CCeEEEEeCCCeEEEEeCCCCC----ceeeeccCccceEEEEecCCC---CcEEEEEecCCcEEEE
Q 021121 160 RH------------SDVFCSASGDCTLRIWDVREMG----STMIIPAHEFEILACDWNKYD---DCLIASASVDKSIKIW 220 (317)
Q Consensus 160 ~~------------~~~l~~~~~dg~i~i~d~~~~~----~~~~~~~~~~~v~~i~~~~~~---~~~l~~~~~d~~i~v~ 220 (317)
+. +++|++|+.|+.|++||+++++ ....+.+|...|.+++|+| + +.+|++++.|++|++|
T Consensus 156 ~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp-~~~~~~~las~s~D~~v~iW 234 (297)
T 2pm7_B 156 ATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSP-TVLLRSYMASVSQDRTCIIW 234 (297)
T ss_dssp CC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECC-CCSSSEEEEEEETTSCEEEE
T ss_pred CcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECC-CCCCceEEEEEECCCcEEEE
Confidence 62 4689999999999999998876 4567788999999999999 6 5899999999999999
Q ss_pred EccCCCcc--EEEE--ecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccc
Q 021121 221 DVRNYRVP--IAVL--NGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVE 269 (317)
Q Consensus 221 d~~~~~~~--~~~~--~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~ 269 (317)
|++..... ...+ ..|...|.+++|+|+++ +|++++.|+.|++|+....
T Consensus 235 d~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~las~~~D~~v~lw~~~~~ 286 (297)
T 2pm7_B 235 TQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN-VLALSGGDNKVTLWKENLE 286 (297)
T ss_dssp EESSTTSCCEEEESSSSCCSSCEEEEEECSSSC-CEEEEETTSCEEEEEECTT
T ss_pred EeCCCCCccceeeeecccCCCcEEEEEECCCCC-EEEEEcCCCcEEEEEECCC
Confidence 99874321 2233 46788999999999998 7999999999999997643
No 63
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=3.4e-40 Score=277.56 Aligned_cols=293 Identities=15% Similarity=0.231 Sum_probs=231.6
Q ss_pred cCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeee----------ecCCCCeeEEEecCCCCCe
Q 021121 6 TPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVA----------FDTADGVYDLAWSESHDSL 75 (317)
Q Consensus 6 ~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~----------~~~~~~v~~~~~~~~~~~~ 75 (317)
|...|.+++|+|. ++.++++++. ||.|++||+............ ..|...|.+++|+|++..+
T Consensus 42 h~~~v~~~~~s~~-~~~~l~~~~~------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 114 (408)
T 4a11_B 42 HGGGINTLDIEPV-EGRYMLSGGS------DGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGM 114 (408)
T ss_dssp CSSCEEEEEECTT-TCCEEEEEET------TSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTC
T ss_pred cCCcEEEEEEecC-CCCEEEEEcC------CCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcE
Confidence 7889999999994 2444555544 999999999876532221110 1388899999999955579
Q ss_pred EEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCC--CEEEEEcCCCEEEEEEcCCCceeEEeeccccceE
Q 021121 76 LIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRR--DSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVY 153 (317)
Q Consensus 76 l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~ 153 (317)
|++++.||.|++||+... .....+. +...+.++.|+|.+. .++++++.||.|++||+++++.+..+..|...|.
T Consensus 115 l~s~~~d~~i~iwd~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~ 190 (408)
T 4a11_B 115 FTSSSFDKTLKVWDTNTL---QTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEIL 190 (408)
T ss_dssp EEEEETTSEEEEEETTTT---EEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEE
T ss_pred EEEEeCCCeEEEeeCCCC---ccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEE
Confidence 999999999999999865 4444444 778899999988543 2899999999999999999999999999999999
Q ss_pred EEEEecCCCCeEEEEeCCCeEEEEeCCCCC-ceeee---------------ccCccceEEEEecCCCCcEEEEEecCCcE
Q 021121 154 NATWNPRHSDVFCSASGDCTLRIWDVREMG-STMII---------------PAHEFEILACDWNKYDDCLIASASVDKSI 217 (317)
Q Consensus 154 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~---------------~~~~~~v~~i~~~~~~~~~l~~~~~d~~i 217 (317)
+++|+|++..++++++.||.|++||+++.. ....+ ..|...|.+++|+| ++++|++++.|+.|
T Consensus 191 ~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i 269 (408)
T 4a11_B 191 AVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTS-DGLHLLTVGTDNRM 269 (408)
T ss_dssp EEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECT-TSSEEEEEETTSCE
T ss_pred EEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcC-CCCEEEEecCCCeE
Confidence 999999955579999999999999998765 23332 46888999999999 99999999999999
Q ss_pred EEEEccCCCccEEEEec-----CCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEEecc
Q 021121 218 KIWDVRNYRVPIAVLNG-----HGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLV 292 (317)
Q Consensus 218 ~v~d~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~ 292 (317)
++||+++.+... .... ....+........+. .+++++.++.|++||+.+++ .+..+.+|...|++++|+|+
T Consensus 270 ~vwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~v~d~~~~~-~~~~~~~~~~~v~~~~~s~~- 345 (408)
T 4a11_B 270 RLWNSSNGENTL-VNYGKVCNNSKKGLKFTVSCGCSS-EFVFVPYGSTIAVYTVYSGE-QITMLKGHYKTVDCCVFQSN- 345 (408)
T ss_dssp EEEETTTCCBCC-CCCCCCCCCCSSCCCCEECCSSSS-CEEEEEETTEEEEEETTTCC-EEEEECCCSSCEEEEEEETT-
T ss_pred EEEECCCCccce-eccccccccccccceeEEecCCCc-eEEEEecCCEEEEEECcCCc-ceeeeccCCCeEEEEEEcCC-
Confidence 999999876422 2111 111222222222333 57777889999999999876 66788999999999999998
Q ss_pred CCeEEEeecCCcEEEEecCCCC
Q 021121 293 EGLLASTGWDELVYVWQQGMDP 314 (317)
Q Consensus 293 ~~~l~s~~~dg~i~~w~~~~~~ 314 (317)
+.+|++++.||.|++|++...+
T Consensus 346 ~~~l~s~~~dg~i~iw~~~~~~ 367 (408)
T 4a11_B 346 FQELYSGSRDCNILAWVPSLYE 367 (408)
T ss_dssp TTEEEEEETTSCEEEEEECC--
T ss_pred CCEEEEECCCCeEEEEeCCCCC
Confidence 7899999999999999998753
No 64
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.2e-40 Score=303.88 Aligned_cols=289 Identities=21% Similarity=0.293 Sum_probs=248.6
Q ss_pred cCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeE
Q 021121 6 TPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSV 85 (317)
Q Consensus 6 ~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 85 (317)
|...|.+++|+| ++.++++++. +|.|++||+..... . .....|...|.+++|+|++ .+|++|+.||.|
T Consensus 12 h~~~v~~i~~sp--~~~~la~~~~------~g~v~iwd~~~~~~-~--~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i 79 (814)
T 3mkq_A 12 RSDRVKGIDFHP--TEPWVLTTLY------SGRVEIWNYETQVE-V--RSIQVTETPVRAGKFIARK-NWIIVGSDDFRI 79 (814)
T ss_dssp ECSCEEEEEECS--SSSEEEEEET------TSEEEEEETTTTEE-E--EEEECCSSCEEEEEEEGGG-TEEEEEETTSEE
T ss_pred CCCceEEEEECC--CCCEEEEEeC------CCEEEEEECCCCce-E--EEEecCCCcEEEEEEeCCC-CEEEEEeCCCeE
Confidence 788999999999 5666666665 89999999977541 2 2223688999999999998 699999999999
Q ss_pred EEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCC-ceeEEeeccccceEEEEEecCCCCe
Q 021121 86 KIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRP-TSVRTFKEHAYCVYNATWNPRHSDV 164 (317)
Q Consensus 86 ~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~ 164 (317)
++||+.++ +....+..|...|.+++|+|+++ ++++++.||.|++||++++ .....+..|...|.+++|+|.++..
T Consensus 80 ~vw~~~~~---~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~ 155 (814)
T 3mkq_A 80 RVFNYNTG---EKVVDFEAHPDYIRSIAVHPTKP-YVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPST 155 (814)
T ss_dssp EEEETTTC---CEEEEEECCSSCEEEEEECSSSS-EEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEE
T ss_pred EEEECCCC---cEEEEEecCCCCEEEEEEeCCCC-EEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCE
Confidence 99999876 67778889999999999999998 8999999999999999987 6677888899999999999944889
Q ss_pred EEEEeCCCeEEEEeCCCCCceeeeccCc-cceEEEEecCC-CCcEEEEEecCCcEEEEEccCCCccEEEEecCCCceeEE
Q 021121 165 FCSASGDCTLRIWDVREMGSTMIIPAHE-FEILACDWNKY-DDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKV 242 (317)
Q Consensus 165 l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~v~~i~~~~~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~v~~~ 242 (317)
+++++.||.|++||+++++....+..+. ..+.+++|+|. ++.++++++.|+.|++||+++.+ .+..+.+|...|.++
T Consensus 156 l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~-~~~~~~~~~~~v~~~ 234 (814)
T 3mkq_A 156 FASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKS-CVATLEGHMSNVSFA 234 (814)
T ss_dssp EEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTE-EEEEEECCSSCEEEE
T ss_pred EEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCc-EEEEEcCCCCCEEEE
Confidence 9999999999999999888777776554 78999999973 67799999999999999998865 477888899999999
Q ss_pred EecCCCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEeecCCcEEEEecCCC
Q 021121 243 KFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGMD 313 (317)
Q Consensus 243 ~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~ 313 (317)
+|+|+++ +|++++.||.|++||+.+++ ....+..|...+.+++|+|++...+++++.++.+.+|++...
T Consensus 235 ~~~~~~~-~l~~~~~dg~v~vwd~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (814)
T 3mkq_A 235 VFHPTLP-IIISGSEDGTLKIWNSSTYK-VEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGND 303 (814)
T ss_dssp EECSSSS-EEEEEETTSCEEEEETTTCS-EEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCC
T ss_pred EEcCCCC-EEEEEeCCCeEEEEECCCCc-EEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCC
Confidence 9999998 79999999999999999876 667788888999999999985455455556777899998754
No 65
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=3.6e-40 Score=271.45 Aligned_cols=246 Identities=19% Similarity=0.287 Sum_probs=206.9
Q ss_pred ecCCCCeeEEEe-----cC-CCCCeEEEEEcCCeEEEEEeCCCCC----CCCceeeccCCcceEEEEEecCCCCEEEEEc
Q 021121 57 FDTADGVYDLAW-----SE-SHDSLLIAAVADGSVKIYDTALPPT----ANPIRSLHEHTREVHSADYNPTRRDSFITSS 126 (317)
Q Consensus 57 ~~~~~~v~~~~~-----~~-~~~~~l~~~~~dg~i~v~~~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 126 (317)
.+|...|++++| ++ ++ .+|++|+.|++|++||+...+. ..+...+.+|...|.+++|+|++. ++++++
T Consensus 18 ~gH~~~V~~~~~~~s~~~~~d~-~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~-~l~s~s 95 (343)
T 2xzm_R 18 EGHSDWVTSIVAGFSQKENEDS-PVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENC-FAISSS 95 (343)
T ss_dssp ECCSSCEEEEEECCCSSTTCCC-CEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTT-EEEEEE
T ss_pred ccchhhhhheeeEEEeecCCCC-CEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCC-EEEEEc
Confidence 379999999999 76 65 6999999999999999975422 134556789999999999999988 999999
Q ss_pred CCCEEEEEEcCCCceeEEeeccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeee---ccCccceEEEEecCC
Q 021121 127 WDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMII---PAHEFEILACDWNKY 203 (317)
Q Consensus 127 ~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~---~~~~~~v~~i~~~~~ 203 (317)
.|+.|++||+++++.+..+.+|...|.+++|+|+ ++++++++.|+.|++||++.. ..... ..|...+.+++|+|
T Consensus 96 ~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~-~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~~~v~~~~~~~- 172 (343)
T 2xzm_R 96 WDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPD-NRQILSAGAEREIKLWNILGE-CKFSSAEKENHSDWVSCVRYSP- 172 (343)
T ss_dssp TTSEEEEEETTSSCEEEEEECCCSCEEEEEECSS-TTEEEEEETTSCEEEEESSSC-EEEECCTTTSCSSCEEEEEECC-
T ss_pred CCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCC-CCEEEEEcCCCEEEEEeccCC-ceeeeecccCCCceeeeeeecc-
Confidence 9999999999999999999999999999999998 889999999999999999743 33222 26788899999999
Q ss_pred CC----------cEEEEEecCCcEEEEEccCCCccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEeccccccee
Q 021121 204 DD----------CLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALV 273 (317)
Q Consensus 204 ~~----------~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~ 273 (317)
++ .++++++.|+.|++||.+ ......+.+|...|.+++|+|+++ +|++|+.||.|++||+.......
T Consensus 173 ~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~--~~~~~~~~~h~~~v~~~~~s~~g~-~l~sgs~dg~v~iwd~~~~~~~~ 249 (343)
T 2xzm_R 173 IMKSANKVQPFAPYFASVGWDGRLKVWNTN--FQIRYTFKAHESNVNHLSISPNGK-YIATGGKDKKLLIWDILNLTYPQ 249 (343)
T ss_dssp CCCSCSCCCSSCCEEEEEETTSEEEEEETT--TEEEEEEECCSSCEEEEEECTTSS-EEEEEETTCEEEEEESSCCSSCS
T ss_pred ccccccccCCCCCEEEEEcCCCEEEEEcCC--CceeEEEcCccccceEEEECCCCC-EEEEEcCCCeEEEEECCCCcccc
Confidence 54 789999999999999943 234667889999999999999998 79999999999999996544333
Q ss_pred eeeecccceeEeEEEEeccCCeEEEeecCCcEEEEecCCC
Q 021121 274 GRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGMD 313 (317)
Q Consensus 274 ~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~ 313 (317)
..+ .+...|.+++|+|+ +.+++ ++.|+.|++|++...
T Consensus 250 ~~~-~~~~~v~~v~~sp~-~~~la-~~~d~~v~iw~~~~~ 286 (343)
T 2xzm_R 250 REF-DAGSTINQIAFNPK-LQWVA-VGTDQGVKIFNLMTQ 286 (343)
T ss_dssp EEE-ECSSCEEEEEECSS-SCEEE-EEESSCEEEEESSSC
T ss_pred eee-cCCCcEEEEEECCC-CCEEE-EECCCCEEEEEeCCC
Confidence 333 34567999999998 66655 556888999998764
No 66
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=2.3e-40 Score=272.49 Aligned_cols=255 Identities=19% Similarity=0.288 Sum_probs=217.0
Q ss_pred ecCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCC-CCceeeccCCcceEEEEEec--CCCCEEEEEcCCCEEEE
Q 021121 57 FDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTA-NPIRSLHEHTREVHSADYNP--TRRDSFITSSWDDTVKL 133 (317)
Q Consensus 57 ~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~--~~~~~l~~~~~dg~v~i 133 (317)
.+|.+.|++++|+|++ .+|++|+.||.|++||+...... .....+.+|...|.+++|+| ++. +|++++.||.|++
T Consensus 8 ~gH~~~v~~~~~~~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~-~l~s~~~dg~v~v 85 (351)
T 3f3f_A 8 SGHDDLVHDVVYDFYG-RHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGR-IIASASYDKTVKL 85 (351)
T ss_dssp CCCSSCEEEEEECSSS-SEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCS-EEEEEETTSCEEE
T ss_pred cccccceeEEEEcCCC-CEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCC-EEEEEcCCCeEEE
Confidence 3799999999999998 69999999999999999864221 34566778999999999999 466 9999999999999
Q ss_pred EEcCCC---------ceeEEeeccccceEEEEEecCC-CCeEEEEeCCCeEEEEeCCCCCceeeec-------------c
Q 021121 134 WTVDRP---------TSVRTFKEHAYCVYNATWNPRH-SDVFCSASGDCTLRIWDVREMGSTMIIP-------------A 190 (317)
Q Consensus 134 wd~~~~---------~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~-------------~ 190 (317)
||++++ +.+..+..|...|.+++|+|+. +.++++++.||.|++||+++++.+..+. .
T Consensus 86 wd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (351)
T 3f3f_A 86 WEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPAN 165 (351)
T ss_dssp EEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSS
T ss_pred EecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCC
Confidence 999887 4577788899999999999974 6789999999999999999887654432 5
Q ss_pred CccceEEEEecCC--CCcEEEEEecCCcEEEEEccCCCc-cEEEEecCCCceeEEEecCCCC---eeEEeeecCCeEEEE
Q 021121 191 HEFEILACDWNKY--DDCLIASASVDKSIKIWDVRNYRV-PIAVLNGHGYAVRKVKFSPHRR---NLLASCSYDMTVCLW 264 (317)
Q Consensus 191 ~~~~v~~i~~~~~--~~~~l~~~~~d~~i~v~d~~~~~~-~~~~~~~~~~~v~~~~~~~~~~---~~l~~~~~d~~i~vw 264 (317)
+...+.+++|+|. ++.++++++.++.+.+|+....+. .+..+.+|...|++++|+|++. .+|++++.||.|++|
T Consensus 166 ~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iw 245 (351)
T 3f3f_A 166 HLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIF 245 (351)
T ss_dssp CSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEE
T ss_pred cccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEE
Confidence 6778999999993 389999999999998887766542 2566778999999999999982 389999999999999
Q ss_pred eccccc---------------------------------------------ceeeeeecccceeEeEEEEeccCCeEEEe
Q 021121 265 DFMVED---------------------------------------------ALVGRYDHHTEFAVGVDMSVLVEGLLAST 299 (317)
Q Consensus 265 d~~~~~---------------------------------------------~~~~~~~~~~~~v~~~~~~~~~~~~l~s~ 299 (317)
|++... ..+..+.+|...|++++|+|+ +.+|+++
T Consensus 246 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~-~~~l~s~ 324 (351)
T 3f3f_A 246 KITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLT-GTILSSA 324 (351)
T ss_dssp EEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSS-SCCEEEE
T ss_pred eCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCC-CCEEEEe
Confidence 998741 355667889999999999998 7899999
Q ss_pred ecCCcEEEEecCCCC
Q 021121 300 GWDELVYVWQQGMDP 314 (317)
Q Consensus 300 ~~dg~i~~w~~~~~~ 314 (317)
+.||.|++|++....
T Consensus 325 ~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 325 GDDGKVRLWKATYSN 339 (351)
T ss_dssp ETTSCEEEEEECTTS
T ss_pred cCCCcEEEEecCcCc
Confidence 999999999998754
No 67
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-40 Score=276.59 Aligned_cols=251 Identities=23% Similarity=0.373 Sum_probs=216.7
Q ss_pred ecCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecC--CCCEEEEEcCCCEEEEE
Q 021121 57 FDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPT--RRDSFITSSWDDTVKLW 134 (317)
Q Consensus 57 ~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~l~~~~~dg~v~iw 134 (317)
..|...|++++|+|++ .+|++|+.||.|++|++... .......+.+|...|.+++|+++ +. +|++++.||.|++|
T Consensus 8 ~~h~~~v~~~~~s~~~-~~l~~~~~dg~i~iw~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~~-~l~s~~~dg~v~iw 84 (379)
T 3jrp_A 8 NAHNELIHDAVLDYYG-KRLATCSSDKTIKIFEVEGE-THKLIDTLTGHEGPVWRVDWAHPKFGT-ILASCSYDGKVLIW 84 (379)
T ss_dssp EECCCCEEEEEECSSS-SEEEEEETTSCEEEEEEETT-EEEEEEEECCCSSCEEEEEECCGGGCS-EEEEEETTSCEEEE
T ss_pred cCCcccEEEEEEcCCC-CEEEEEECCCcEEEEecCCC-cceeeeEecCCCCcEEEEEeCCCCCCC-EEEEeccCCEEEEE
Confidence 3799999999999998 69999999999999999742 33566678899999999999877 66 99999999999999
Q ss_pred EcCCCc--eeEEeeccccceEEEEEecCC-CCeEEEEeCCCeEEEEeCCCCC--ceeeeccCccceEEEEecCC------
Q 021121 135 TVDRPT--SVRTFKEHAYCVYNATWNPRH-SDVFCSASGDCTLRIWDVREMG--STMIIPAHEFEILACDWNKY------ 203 (317)
Q Consensus 135 d~~~~~--~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~v~~i~~~~~------ 203 (317)
|+++++ ....+..|...|.+++|+|+. +.++++++.||.|++||+++.. ....+..|...+.+++|+|.
T Consensus 85 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 164 (379)
T 3jrp_A 85 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDG 164 (379)
T ss_dssp EEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC-----
T ss_pred EcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccc
Confidence 999986 677778899999999999974 6789999999999999999873 34456688999999999994
Q ss_pred ------CCcEEEEEecCCcEEEEEccCCCc---cEEEEecCCCceeEEEecCC---CCeeEEeeecCCeEEEEeccccc-
Q 021121 204 ------DDCLIASASVDKSIKIWDVRNYRV---PIAVLNGHGYAVRKVKFSPH---RRNLLASCSYDMTVCLWDFMVED- 270 (317)
Q Consensus 204 ------~~~~l~~~~~d~~i~v~d~~~~~~---~~~~~~~~~~~v~~~~~~~~---~~~~l~~~~~d~~i~vwd~~~~~- 270 (317)
++.++++++.|+.|++||++.... ....+.+|...|.+++|+|+ +. +|++++.||.|++||+++++
T Consensus 165 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~-~l~s~~~dg~i~iwd~~~~~~ 243 (379)
T 3jrp_A 165 EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRS-YLASVSQDRTCIIWTQDNEQG 243 (379)
T ss_dssp -----CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSE-EEEEEETTSCEEEEEESSTTS
T ss_pred cccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCC-eEEEEeCCCEEEEEeCCCCCc
Confidence 489999999999999999987653 34567789999999999999 55 89999999999999998864
Q ss_pred ---ceeeeeecccceeEeEEEEeccCCeEEEeecCCcEEEEecCC
Q 021121 271 ---ALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGM 312 (317)
Q Consensus 271 ---~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~ 312 (317)
........|...|.+++|+|+ +.+|++++.||.|++|++..
T Consensus 244 ~~~~~~~~~~~~~~~v~~~~~s~~-g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 244 PWKKTLLKEEKFPDVLWRASWSLS-GNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp CCEEEESSSSCCSSCEEEEEECSS-SCCEEEEESSSSEEEEEEEE
T ss_pred cceeeeeccccCCCcEEEEEEcCC-CCEEEEecCCCcEEEEeCCC
Confidence 222333458889999999999 78999999999999999974
No 68
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=3.2e-39 Score=276.45 Aligned_cols=278 Identities=22% Similarity=0.335 Sum_probs=231.8
Q ss_pred cCcc-eeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCe
Q 021121 6 TPFN-GYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGS 84 (317)
Q Consensus 6 ~~~~-v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 84 (317)
|... +.++.|++ +. +++++. ||.|++||+.+... ......|...|.+++|+|++ ++++|+.||.
T Consensus 120 h~~~v~~~~~~~~---~~-l~sgs~------dg~i~vwd~~~~~~---~~~~~~h~~~V~~l~~~~~~--~l~s~s~dg~ 184 (464)
T 3v7d_B 120 HMTSVITCLQFED---NY-VITGAD------DKMIRVYDSINKKF---LLQLSGHDGGVWALKYAHGG--ILVSGSTDRT 184 (464)
T ss_dssp CSSSCEEEEEEET---TE-EEEEET------TSCEEEEETTTTEE---EEEECCCSSCEEEEEECSTT--EEEEEETTSC
T ss_pred CCCCcEEEEEECC---CE-EEEEcC------CCcEEEEECCCCcE---EEEEeCCCcCEEEEEEcCCC--EEEEEeCCCC
Confidence 4444 46666644 44 444444 99999999987641 12223699999999999875 8999999999
Q ss_pred EEEEEeCCCCCCCCceeeccCCcceEEEEEec--CCCCEEEEEcCCCEEEEEEcCCCce---------------------
Q 021121 85 VKIYDTALPPTANPIRSLHEHTREVHSADYNP--TRRDSFITSSWDDTVKLWTVDRPTS--------------------- 141 (317)
Q Consensus 85 i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~l~~~~~dg~v~iwd~~~~~~--------------------- 141 (317)
|++||+.++ +....+.+|...|.+++|++ ++. ++++++.||.|++||++++..
T Consensus 185 i~vwd~~~~---~~~~~~~~h~~~v~~l~~~~~~~~~-~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (464)
T 3v7d_B 185 VRVWDIKKG---CCTHVFEGHNSTVRCLDIVEYKNIK-YIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENP 260 (464)
T ss_dssp EEEEETTTT---EEEEEECCCSSCEEEEEEEESSSCE-EEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCT
T ss_pred EEEEECCCC---cEEEEECCCCCccEEEEEecCCCCC-EEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCe
Confidence 999999876 67788889999999999985 555 899999999999999987653
Q ss_pred --eEEeeccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEecCCcEEE
Q 021121 142 --VRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKI 219 (317)
Q Consensus 142 --~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v 219 (317)
...+.+|...+.++. ++ ++++++++.||.|++||+++++.+..+.+|...+.+++|+| +++++++++.|+.|++
T Consensus 261 ~~~~~~~~~~~~v~~~~--~~-~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~sg~~dg~i~v 336 (464)
T 3v7d_B 261 YFVGVLRGHMASVRTVS--GH-GNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDH-ERKRCISASMDTTIRI 336 (464)
T ss_dssp TEEEEECCCSSCEEEEE--EE-TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEET-TTTEEEEEETTSCEEE
T ss_pred EEEEEccCccceEEEEc--CC-CCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcC-CCCEEEEEeCCCcEEE
Confidence 445667888888874 55 78999999999999999999999999999999999999999 9999999999999999
Q ss_pred EEccCCCccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEe
Q 021121 220 WDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLAST 299 (317)
Q Consensus 220 ~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~ 299 (317)
||+++++ ++..+.+|...|.+++|++ . +|++++.||.|++||+.+.+.... ..+...+..++|+++ +.+++++
T Consensus 337 wd~~~~~-~~~~~~~h~~~v~~~~~~~--~-~l~s~s~dg~v~vwd~~~~~~~~~--~~~~~~~~~~~~~~~-~~~l~~~ 409 (464)
T 3v7d_B 337 WDLENGE-LMYTLQGHTALVGLLRLSD--K-FLVSAAADGSIRGWDANDYSRKFS--YHHTNLSAITTFYVS-DNILVSG 409 (464)
T ss_dssp EETTTTE-EEEEECCCSSCEEEEEECS--S-EEEEEETTSEEEEEETTTCCEEEE--EECTTCCCEEEEEEC-SSEEEEE
T ss_pred EECCCCc-EEEEEeCCCCcEEEEEEcC--C-EEEEEeCCCcEEEEECCCCceeee--ecCCCCccEEEEEeC-CCEEEEe
Confidence 9999866 5888899999999999984 4 799999999999999998763322 245667888899998 7888888
Q ss_pred ecCCcEEEEecCCCC
Q 021121 300 GWDELVYVWQQGMDP 314 (317)
Q Consensus 300 ~~dg~i~~w~~~~~~ 314 (317)
+ ||.|++||+....
T Consensus 410 ~-dg~i~iwd~~~g~ 423 (464)
T 3v7d_B 410 S-ENQFNIYNLRSGK 423 (464)
T ss_dssp E-TTEEEEEETTTCC
T ss_pred c-CCeEEEEECCCCc
Confidence 8 9999999998753
No 69
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1.1e-39 Score=277.13 Aligned_cols=274 Identities=22% Similarity=0.422 Sum_probs=229.3
Q ss_pred cCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeE
Q 021121 6 TPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSV 85 (317)
Q Consensus 6 ~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 85 (317)
+...|++++|. +..+ ++++. ||.|++||+.+... ......|...|.+++| ++ .+|++|+.||.|
T Consensus 132 ~~~~v~~~~~d---~~~l-~~g~~------dg~i~iwd~~~~~~---~~~~~~h~~~v~~l~~--~~-~~l~sg~~dg~i 195 (435)
T 1p22_A 132 TSKGVYCLQYD---DQKI-VSGLR------DNTIKIWDKNTLEC---KRILTGHTGSVLCLQY--DE-RVIITGSSDSTV 195 (435)
T ss_dssp SCCCEEEEECC---SSEE-EEEES------SSCEEEEESSSCCE---EEEECCCSSCEEEEEC--CS-SEEEEEETTSCE
T ss_pred CCCcEEEEEEC---CCEE-EEEeC------CCeEEEEeCCCCeE---EEEEcCCCCcEEEEEE--CC-CEEEEEcCCCeE
Confidence 34567777762 2444 44444 99999999987642 1222368899999999 44 699999999999
Q ss_pred EEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCcee---EEeeccccceEEEEEecCCC
Q 021121 86 KIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSV---RTFKEHAYCVYNATWNPRHS 162 (317)
Q Consensus 86 ~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~---~~~~~~~~~v~~~~~~~~~~ 162 (317)
++||+.++ +.+..+..|...|.+++|++ . .+++|+.||.|++||+++++.. ..+.+|...|.+++|. +
T Consensus 196 ~vwd~~~~---~~~~~~~~h~~~v~~l~~~~--~-~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~---~ 266 (435)
T 1p22_A 196 RVWDVNTG---EMLNTLIHHCEAVLHLRFNN--G-MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD---D 266 (435)
T ss_dssp EEEESSSC---CEEEEECCCCSCEEEEECCT--T-EEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE---T
T ss_pred EEEECCCC---cEEEEEcCCCCcEEEEEEcC--C-EEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeC---C
Confidence 99999876 67788889999999999974 3 8999999999999999988765 5677899999999993 7
Q ss_pred CeEEEEeCCCeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEecCCCceeEE
Q 021121 163 DVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKV 242 (317)
Q Consensus 163 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~v~~~ 242 (317)
+++++++.||.|++||+++++.+..+..|...+.++.++ ++++++|+.||.|++||+++++ ++..+.+|...|.++
T Consensus 267 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~g~~dg~i~iwd~~~~~-~~~~~~~h~~~v~~~ 342 (435)
T 1p22_A 267 KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGA-CLRVLEGHEELVRCI 342 (435)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE---TTEEEEEETTSCEEEEETTTCC-EEEEECCCSSCEEEE
T ss_pred CEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC---CCEEEEEeCCCeEEEEECCCCC-EEEEEeCCcCcEEEE
Confidence 899999999999999999999999999999999999984 5699999999999999999876 478889999999999
Q ss_pred EecCCCCeeEEeeecCCeEEEEecccccc--------eeeeeecccceeEeEEEEeccCCeEEEeecCCcEEEEecCCCC
Q 021121 243 KFSPHRRNLLASCSYDMTVCLWDFMVEDA--------LVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGMDP 314 (317)
Q Consensus 243 ~~~~~~~~~l~~~~~d~~i~vwd~~~~~~--------~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~ 314 (317)
+| ++. +|++|+.||.|++||+.+.+. ....+.+|.+.|.+++| + +.+|++++.||.|++||+...+
T Consensus 343 ~~--~~~-~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~-~~~l~s~s~Dg~i~iwd~~~~~ 416 (435)
T 1p22_A 343 RF--DNK-RIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--D-EFQIVSSSHDDTILIWDFLNDP 416 (435)
T ss_dssp EC--CSS-EEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--C-SSCEEECCSSSEEEEEC-----
T ss_pred Ee--cCC-EEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--C-CCEEEEEeCCCEEEEEECCCCC
Confidence 99 555 799999999999999987641 56778899999999999 4 7789999999999999997754
No 70
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=5.1e-41 Score=273.28 Aligned_cols=251 Identities=19% Similarity=0.228 Sum_probs=202.7
Q ss_pred ecCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCC-CCCeEEEEEcCC
Q 021121 5 KTPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSES-HDSLLIAAVADG 83 (317)
Q Consensus 5 ~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~dg 83 (317)
.|...|++++|+| ++.++++++. |+.|++||+..... .......+|...|.+++|+|+ ...+|++|+.|+
T Consensus 11 ~H~~~V~~v~~s~--~g~~lasgs~------D~~v~lwd~~~~~~-~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~ 81 (316)
T 3bg1_A 11 SHEDMIHDAQMDY--YGTRLATCSS------DRSVKIFDVRNGGQ-ILIADLRGHEGPVWQVAWAHPMYGNILASCSYDR 81 (316)
T ss_dssp ---CCEEEEEECG--GGCEEEEEET------TTEEEEEEEETTEE-EEEEEEECCSSCEEEEEECCGGGSSCEEEEETTS
T ss_pred cccCeEEEeeEcC--CCCEEEEEeC------CCeEEEEEecCCCc-EEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCC
Confidence 4788999999999 5677777775 99999999976531 111223479999999999863 236999999999
Q ss_pred eEEEEEeCCCCCCCCceeeccCCcceEEEEEecC--CCCEEEEEcCCCEEEEEEcCCCce---eEEeeccccceEEEEEe
Q 021121 84 SVKIYDTALPPTANPIRSLHEHTREVHSADYNPT--RRDSFITSSWDDTVKLWTVDRPTS---VRTFKEHAYCVYNATWN 158 (317)
Q Consensus 84 ~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~---~~~~~~~~~~v~~~~~~ 158 (317)
+|++||++.+ .......+.+|...|.+++|+|+ +. +|++|+.|+.|++||++++.. ...+..|...+.+++|+
T Consensus 82 ~v~iWd~~~~-~~~~~~~~~~h~~~V~~v~~~p~~~g~-~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~ 159 (316)
T 3bg1_A 82 KVIIWREENG-TWEKSHEHAGHDSSVNSVCWAPHDYGL-ILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWA 159 (316)
T ss_dssp CEEEECCSSS-CCCEEEEECCCSSCCCEEEECCTTTCS-CEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEEC
T ss_pred EEEEEECCCC-cceEEEEccCCCCceEEEEECCCCCCc-EEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEc
Confidence 9999998754 22345567789999999999998 55 899999999999999987632 34456788899999999
Q ss_pred cCC----------------CCeEEEEeCCCeEEEEeCCCC---CceeeeccCccceEEEEecCCCC----cEEEEEecCC
Q 021121 159 PRH----------------SDVFCSASGDCTLRIWDVREM---GSTMIIPAHEFEILACDWNKYDD----CLIASASVDK 215 (317)
Q Consensus 159 ~~~----------------~~~l~~~~~dg~i~i~d~~~~---~~~~~~~~~~~~v~~i~~~~~~~----~~l~~~~~d~ 215 (317)
|+. +.+|++++.|+.|++||++.. +....+.+|...|.+++|+| ++ .+|++++.|+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp-~~~~~~~~las~s~D~ 238 (316)
T 3bg1_A 160 PAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAP-SIGLPTSTIASCSQDG 238 (316)
T ss_dssp CCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCC-CSSCSCCEEEEEETTC
T ss_pred cccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecC-CCCCCCceEEEEcCCC
Confidence 873 368999999999999999755 35567788999999999999 64 8999999999
Q ss_pred cEEEEEccCC---CccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEeccc
Q 021121 216 SIKIWDVRNY---RVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMV 268 (317)
Q Consensus 216 ~i~v~d~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~ 268 (317)
+|++||++.. ......+..|...|.+++|+|+++ +|++++.|+.|++|+...
T Consensus 239 ~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~-~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 239 RVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITAN-ILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp EEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTC-CEEEEESSSCEEEEEECT
T ss_pred eEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCC-EEEEEcCCCeEEEEEECC
Confidence 9999999763 212344567889999999999998 799999999999999763
No 71
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.5e-39 Score=308.89 Aligned_cols=286 Identities=23% Similarity=0.355 Sum_probs=249.4
Q ss_pred cCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeE
Q 021121 6 TPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSV 85 (317)
Q Consensus 6 ~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 85 (317)
|...|++++|+| ++.++++++. ||.|++||+.+... . .....|...|.+++|+|++ .+|++|+.||.|
T Consensus 614 h~~~v~~~~~s~--~~~~l~s~~~------d~~i~vw~~~~~~~-~--~~~~~h~~~v~~~~~s~~~-~~l~s~~~d~~v 681 (1249)
T 3sfz_A 614 HTDAVYHACFSQ--DGQRIASCGA------DKTLQVFKAETGEK-L--LDIKAHEDEVLCCAFSSDD-SYIATCSADKKV 681 (1249)
T ss_dssp CSSCEEEEEECT--TSSEEEEEET------TSCEEEEETTTCCE-E--EEECCCSSCEEEEEECTTS-SEEEEEETTSEE
T ss_pred ccccEEEEEECC--CCCEEEEEeC------CCeEEEEECCCCCE-E--EEeccCCCCEEEEEEecCC-CEEEEEeCCCeE
Confidence 778999999999 6777777765 99999999987652 2 2223689999999999998 699999999999
Q ss_pred EEEEeCCCCCCCCceeeccCCcceEEEEEecCC-CCEEEEEcCCCEEEEEEcCCCceeEEeeccccceEEEEEecCCCCe
Q 021121 86 KIYDTALPPTANPIRSLHEHTREVHSADYNPTR-RDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDV 164 (317)
Q Consensus 86 ~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 164 (317)
++||+.++ +.+..+.+|...|.+++|+|++ ..++++++.||.|++||+++++....+.+|...|.+++|+|+ +.+
T Consensus 682 ~vwd~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~-~~~ 757 (1249)
T 3sfz_A 682 KIWDSATG---KLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPD-DEL 757 (1249)
T ss_dssp EEEETTTC---CEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSS-TTE
T ss_pred EEEECCCC---ceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecC-CCE
Confidence 99999876 7788888999999999999953 238899999999999999999999999999999999999998 889
Q ss_pred EEEEeCCCeEEEEeCCCCCceeeecc-------------CccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEE
Q 021121 165 FCSASGDCTLRIWDVREMGSTMIIPA-------------HEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAV 231 (317)
Q Consensus 165 l~~~~~dg~i~i~d~~~~~~~~~~~~-------------~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 231 (317)
+++++.||.|++||+++++....+.. ....+.+++|+| ++..+++++ ++.+.+||+.+.......
T Consensus 758 l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-dg~~l~~~~-~~~v~~~d~~~~~~~~~~ 835 (1249)
T 3sfz_A 758 LASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSA-DGDKIIVAA-KNKVLLFDIHTSGLLAEI 835 (1249)
T ss_dssp EEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCT-TSSEEEEEE-TTEEEEEETTTCCEEEEE
T ss_pred EEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECC-CCCEEEEEc-CCcEEEEEecCCCceeEE
Confidence 99999999999999998866555431 233688999999 899998887 689999999988764455
Q ss_pred EecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEeecCCcEEEEecC
Q 021121 232 LNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQG 311 (317)
Q Consensus 232 ~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~ 311 (317)
..+|...|.+++|+|+++ ++++++.||.|++||+.++. ....+.+|...|.+++|+|+ +..|++++.||.|++|++.
T Consensus 836 ~~~~~~~v~~~~~sp~~~-~l~~~~~dg~v~vwd~~~~~-~~~~~~~h~~~v~~v~~spd-g~~l~s~s~dg~v~vw~~~ 912 (1249)
T 3sfz_A 836 HTGHHSTIQYCDFSPYDH-LAVIALSQYCVELWNIDSRL-KVADCRGHLSWVHGVMFSPD-GSSFLTASDDQTIRVWETK 912 (1249)
T ss_dssp ECSSSSCCCEEEECSSTT-EEEEECSSSCEEEEETTTTE-EEEEECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEEHH
T ss_pred cCCCCCceEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCc-eeeecCCCccceEEEEECCC-CCEEEEEeCCCeEEEEEcc
Confidence 558999999999999998 79999999999999999876 56788899999999999998 8899999999999999975
Q ss_pred C
Q 021121 312 M 312 (317)
Q Consensus 312 ~ 312 (317)
.
T Consensus 913 ~ 913 (1249)
T 3sfz_A 913 K 913 (1249)
T ss_dssp H
T ss_pred c
Confidence 3
No 72
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=4.1e-39 Score=284.90 Aligned_cols=284 Identities=13% Similarity=0.190 Sum_probs=220.9
Q ss_pred cCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCC---CeeEEEecCC-CCCeEEEEEc
Q 021121 6 TPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTAD---GVYDLAWSES-HDSLLIAAVA 81 (317)
Q Consensus 6 ~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~-~~~~l~~~~~ 81 (317)
+...|.+++|+|++.. ++++++. ||.|++||+..... ......|.. .|.+++|+|+ + .+|++++.
T Consensus 159 ~~~~v~~~~~~~~~~~-~l~~~~~------d~~v~vwd~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~-~~l~~~~~ 227 (615)
T 1pgu_A 159 HSQRINACHLKQSRPM-RSMTVGD------DGSVVFYQGPPFKF---SASDRTHHKQGSFVRDVEFSPDSG-EFVITVGS 227 (615)
T ss_dssp CSSCEEEEEECSSSSC-EEEEEET------TTEEEEEETTTBEE---EEEECSSSCTTCCEEEEEECSTTC-CEEEEEET
T ss_pred CCccEEEEEECCCCCc-EEEEEeC------CCcEEEEeCCCcce---eeeecccCCCCceEEEEEECCCCC-CEEEEEeC
Confidence 6678999999995222 4444444 89999999876531 112225777 8999999999 7 69999999
Q ss_pred CCeEEEEEeCCCCCCCCceee-c---cCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeec----------
Q 021121 82 DGSVKIYDTALPPTANPIRSL-H---EHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKE---------- 147 (317)
Q Consensus 82 dg~i~v~~~~~~~~~~~~~~~-~---~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~---------- 147 (317)
||.|++||+..+ +.+..+ . .|...|.+++|+ ++. ++++++.||.|++||+++++.+..+..
T Consensus 228 dg~i~vwd~~~~---~~~~~~~~~~~~~~~~v~~~~~~-~~~-~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~ 302 (615)
T 1pgu_A 228 DRKISCFDGKSG---EFLKYIEDDQEPVQGGIFALSWL-DSQ-KFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQV 302 (615)
T ss_dssp TCCEEEEETTTC---CEEEECCBTTBCCCSCEEEEEES-SSS-EEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEE
T ss_pred CCeEEEEECCCC---CEeEEecccccccCCceEEEEEc-CCC-EEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCcee
Confidence 999999999866 566666 5 899999999999 776 999999999999999987655444332
Q ss_pred -----------------------------------cccc---------------------------------eEEEEEec
Q 021121 148 -----------------------------------HAYC---------------------------------VYNATWNP 159 (317)
Q Consensus 148 -----------------------------------~~~~---------------------------------v~~~~~~~ 159 (317)
|... |.+++| +
T Consensus 303 ~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~-~ 381 (615)
T 1pgu_A 303 GVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDN-S 381 (615)
T ss_dssp EEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEEC-C
T ss_pred EEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEE-C
Confidence 2222 333333 1
Q ss_pred CCCCeEEEE-----------------------------------------------------------------------
Q 021121 160 RHSDVFCSA----------------------------------------------------------------------- 168 (317)
Q Consensus 160 ~~~~~l~~~----------------------------------------------------------------------- 168 (317)
+ +..++++
T Consensus 382 ~-~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 460 (615)
T 1pgu_A 382 K-AQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVA 460 (615)
T ss_dssp S-TTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEE
T ss_pred C-CcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEE
Confidence 1 2233333
Q ss_pred --eC-CCeEEEEeCCCCCce-eeeccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEec-CCCceeEEE
Q 021121 169 --SG-DCTLRIWDVREMGST-MIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNG-HGYAVRKVK 243 (317)
Q Consensus 169 --~~-dg~i~i~d~~~~~~~-~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~-~~~~v~~~~ 243 (317)
+. |+.|++||+.+++.. ..+..|...|.+++|+| ++++|++++.|+.|++||+.+.+. +..+.+ |...|++++
T Consensus 461 ~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~~dg~i~iw~~~~~~~-~~~~~~~h~~~v~~~~ 538 (615)
T 1pgu_A 461 VGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISP-SETYIAAGDVMGKILLYDLQSREV-KTSRWAFRTSKINAIS 538 (615)
T ss_dssp EEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEE-EECCSCCCSSCEEEEE
T ss_pred EeecCCCeEEEEECCCccccccccCCccCceEEEEECC-CCCEEEEcCCCCeEEEeeCCCCcc-eeEeecCCCCceeEEE
Confidence 33 444444444443322 44566888999999999 999999999999999999998664 666666 999999999
Q ss_pred ecC----------CCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEeecCCcEEEEecCC
Q 021121 244 FSP----------HRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGM 312 (317)
Q Consensus 244 ~~~----------~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~ 312 (317)
|+| +++ +|++++.||.|++||+.++...+..+.+|...|++++|+|+ +. |++++.||.|++|++..
T Consensus 539 ~sp~~~~~~~~~~~~~-~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~-~~-l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 539 WKPAEKGANEEEIEED-LVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETP-ST-LVSSGADACIKRWNVVL 614 (615)
T ss_dssp ECCCC------CCSCC-EEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEET-TE-EEEEETTSCEEEEEEC-
T ss_pred EcCccccccccccCCC-EEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCC-CC-eEEecCCceEEEEeeec
Confidence 999 888 79999999999999999885577888999999999999999 66 99999999999999975
No 73
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.8e-40 Score=300.02 Aligned_cols=293 Identities=12% Similarity=0.086 Sum_probs=216.6
Q ss_pred eecCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCccee--------eeeecCCCCeeEEEecCCCCCe
Q 021121 4 FKTPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTE--------LVAFDTADGVYDLAWSESHDSL 75 (317)
Q Consensus 4 ~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~--------~~~~~~~~~v~~~~~~~~~~~~ 75 (317)
+.+...|++++|+| ++.++++++. ||.|++||+......... .....|...|.+++|+|++...
T Consensus 95 ~~~~~~V~~v~~sp--~g~~l~sgs~------dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~ 166 (902)
T 2oaj_A 95 VFVPGKITSIDTDA--SLDWMLIGLQ------NGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGT 166 (902)
T ss_dssp EECSSCEEEEECCT--TCSEEEEEET------TSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEE
T ss_pred EcCCCCEEEEEECC--CCCEEEEEcC------CCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCE
Confidence 45667899999999 5666666665 999999999865421000 1113578899999999975568
Q ss_pred EEEEEcCCeEEEEEeCCCCCCCCceeecc------------------CCcceEEEEEecCCCCEEEEEcCCCEEEEEEcC
Q 021121 76 LIAAVADGSVKIYDTALPPTANPIRSLHE------------------HTREVHSADYNPTRRDSFITSSWDDTVKLWTVD 137 (317)
Q Consensus 76 l~~~~~dg~i~v~~~~~~~~~~~~~~~~~------------------~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~ 137 (317)
+++|+.||.| +||++.. +....+.. |...|.+++|+|++. +|++++.||.|++||++
T Consensus 167 l~~g~~dg~v-lWd~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~-~lasgs~Dg~i~lWd~~ 241 (902)
T 2oaj_A 167 VLISYEYVTL-TYSLVEN---EIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSL-HIITIHEDNSLVFWDAN 241 (902)
T ss_dssp EEEECSSCEE-EEETTTT---EEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSS-EEEEEETTCCEEEEETT
T ss_pred EEEEeCCCcE-EEECCCC---ceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCC-EEEEEECCCeEEEEECC
Confidence 9999999999 9999865 44444443 357899999999988 99999999999999999
Q ss_pred CCceeEE--ee---c-------------cccceEEEEEec----CCCCeEEEEeC-------------------------
Q 021121 138 RPTSVRT--FK---E-------------HAYCVYNATWNP----RHSDVFCSASG------------------------- 170 (317)
Q Consensus 138 ~~~~~~~--~~---~-------------~~~~v~~~~~~~----~~~~~l~~~~~------------------------- 170 (317)
+++.+.. +. . +..+|.+++|++ +++.++++|+.
T Consensus 242 ~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~ 321 (902)
T 2oaj_A 242 SGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSY 321 (902)
T ss_dssp TCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCH
T ss_pred CCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccch
Confidence 8877653 21 1 244688888854 22234555533
Q ss_pred ---------------------------------------------------CCeEEEEeCCCCCceee-------e----
Q 021121 171 ---------------------------------------------------DCTLRIWDVREMGSTMI-------I---- 188 (317)
Q Consensus 171 ---------------------------------------------------dg~i~i~d~~~~~~~~~-------~---- 188 (317)
||.|++||+.++..... +
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~ 401 (902)
T 2oaj_A 322 EGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLR 401 (902)
T ss_dssp HHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBT
T ss_pred hhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccC
Confidence 34455555443321111 1
Q ss_pred ------------------------------ccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCcc---EEE--Ee
Q 021121 189 ------------------------------PAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVP---IAV--LN 233 (317)
Q Consensus 189 ------------------------------~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~---~~~--~~ 233 (317)
.+|...+.+++|+| ++++|++|+.|++|++||+.++... ... +.
T Consensus 402 ~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~sp-dg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~ 480 (902)
T 2oaj_A 402 PLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAE-YGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLS 480 (902)
T ss_dssp TBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCS-EEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHH
T ss_pred CCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccc-cCcEEEEecCCCcEEEEECCCccccCCceEEeech
Confidence 11222333455677 8999999999999999999876421 111 11
Q ss_pred -----cCCCceeEEEecCCCCeeEEeeecCCeEEEEeccccc--------------------------------------
Q 021121 234 -----GHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVED-------------------------------------- 270 (317)
Q Consensus 234 -----~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~-------------------------------------- 270 (317)
+|...|++++|+|+++ +||+|+.||+|+|||+.+++
T Consensus 481 ~~~~~~h~~~V~svafspdg~-~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 559 (902)
T 2oaj_A 481 RTLNKAKELAVDKISFAAETL-ELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPT 559 (902)
T ss_dssp HHTTCSSSCCEEEEEEETTTT-EEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCT
T ss_pred hhcCCCCCCceeEEEecCCCC-eEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCC
Confidence 7889999999999999 79999999999999998762
Q ss_pred ------ceeeeeecccceeEeEEEEeccCCeEEEeecCCcEEEEecCCC
Q 021121 271 ------ALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGMD 313 (317)
Q Consensus 271 ------~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~ 313 (317)
.++..+.+|.+.|++++|+|+ + +||+|+.|++|++||+...
T Consensus 560 ~~~~g~~~~~~l~~h~~~V~svafSpd-G-~lAsgs~D~tv~lwd~~~~ 606 (902)
T 2oaj_A 560 GVRQGFMPSTAVHANKGKTSAINNSNI-G-FVGIAYAAGSLMLIDRRGP 606 (902)
T ss_dssp TCSEEEEEEEEECCCSCSEEEEEECBT-S-EEEEEETTSEEEEEETTTT
T ss_pred CCCCccceeEEEEcCCCcEEEEEecCC-c-EEEEEeCCCcEEEEECCCC
Confidence 135667789999999999999 6 9999999999999998654
No 74
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=5.6e-39 Score=284.00 Aligned_cols=288 Identities=11% Similarity=0.147 Sum_probs=242.6
Q ss_pred ecCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCc-ceeeeeecCCCC-eeEEEecC--CCCCeEEEEE
Q 021121 5 KTPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPA-LTELVAFDTADG-VYDLAWSE--SHDSLLIAAV 80 (317)
Q Consensus 5 ~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~-~~~~~~~~~~~~-v~~~~~~~--~~~~~l~~~~ 80 (317)
.+...|.+++|+| ++.++++++ ++.|++|++...... ........|... |++++|+| ++ .+|++|+
T Consensus 16 ~~~~~v~~~~~sp--dg~~l~~~~-------~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~-~~l~s~~ 85 (615)
T 1pgu_A 16 TQRNFTTHLSYDP--TTNAIAYPC-------GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGS-QYLCSGD 85 (615)
T ss_dssp CCTTCCCCCEEET--TTTEEEEEE-------TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTC-CEEEEEE
T ss_pred CccCceeEEEECC--CCCEEEEec-------CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCC-CEEEEec
Confidence 3667899999999 566666665 679999999865211 112233368889 99999999 88 6999999
Q ss_pred cCCeEEEEEeCCCC-----CCCCceeeccCCcceEEEEEecCCCCEEEEEcCC----CEEEEEEcCCCceeEEeeccccc
Q 021121 81 ADGSVKIYDTALPP-----TANPIRSLHEHTREVHSADYNPTRRDSFITSSWD----DTVKLWTVDRPTSVRTFKEHAYC 151 (317)
Q Consensus 81 ~dg~i~v~~~~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d----g~v~iwd~~~~~~~~~~~~~~~~ 151 (317)
.||.|++||+..+. .......+..|...|.+++|+|+++ ++++++.+ +.|++|| .++.+..+..|...
T Consensus 86 ~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~ 162 (615)
T 1pgu_A 86 ESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGR-RLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQR 162 (615)
T ss_dssp TTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSS-EEEEEECCSSCSEEEEETT--TCCEEEECCSCSSC
T ss_pred CCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCC-EEEEeccCCCCccEEEEEE--CCCcceeeecCCcc
Confidence 99999999996321 1245566778999999999999998 88888877 7888888 56788889999999
Q ss_pred eEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeeccCcc---ceEEEEecCCC-CcEEEEEecCCcEEEEEccCCCc
Q 021121 152 VYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEF---EILACDWNKYD-DCLIASASVDKSIKIWDVRNYRV 227 (317)
Q Consensus 152 v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~---~v~~i~~~~~~-~~~l~~~~~d~~i~v~d~~~~~~ 227 (317)
|.+++|+|++..++++++.|+.|++||+++++.+..+..|.. .|.+++|+| + ++++++++.|+.|++||+++++.
T Consensus 163 v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~dg~i~vwd~~~~~~ 241 (615)
T 1pgu_A 163 INACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSP-DSGEFVITVGSDRKISCFDGKSGEF 241 (615)
T ss_dssp EEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECS-TTCCEEEEEETTCCEEEEETTTCCE
T ss_pred EEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECC-CCCCEEEEEeCCCeEEEEECCCCCE
Confidence 999999999545899999999999999999999999999998 999999999 7 99999999999999999998764
Q ss_pred cEEEE-e---cCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeecc----cceeEeEEEEeccCCeEEEe
Q 021121 228 PIAVL-N---GHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHH----TEFAVGVDMSVLVEGLLAST 299 (317)
Q Consensus 228 ~~~~~-~---~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~l~s~ 299 (317)
+..+ . .|...|.+++|+ +++ +|++++.|+.|++||+++++ ....+..+ ...+.++.|. + +.+++++
T Consensus 242 -~~~~~~~~~~~~~~v~~~~~~-~~~-~l~~~~~d~~i~~wd~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~-~~~l~~~ 315 (615)
T 1pgu_A 242 -LKYIEDDQEPVQGGIFALSWL-DSQ-KFATVGADATIRVWDVTTSK-CVQKWTLDKQQLGNQQVGVVAT-G-NGRIISL 315 (615)
T ss_dssp -EEECCBTTBCCCSCEEEEEES-SSS-EEEEEETTSEEEEEETTTTE-EEEEEECCTTCGGGCEEEEEEE-E-TTEEEEE
T ss_pred -eEEecccccccCCceEEEEEc-CCC-EEEEEcCCCcEEEEECCCCc-EEEEEcCCCCcccCceeEEEeC-C-CCeEEEE
Confidence 6666 5 899999999999 887 79999999999999999876 44555555 4678888886 4 7899999
Q ss_pred ecCCcEEEEecCC
Q 021121 300 GWDELVYVWQQGM 312 (317)
Q Consensus 300 ~~dg~i~~w~~~~ 312 (317)
+.||.|++||+..
T Consensus 316 ~~~g~i~~~d~~~ 328 (615)
T 1pgu_A 316 SLDGTLNFYELGH 328 (615)
T ss_dssp ETTSCEEEEETTE
T ss_pred ECCCCEEEEECCC
Confidence 9999999999875
No 75
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.6e-40 Score=300.67 Aligned_cols=233 Identities=13% Similarity=0.197 Sum_probs=188.2
Q ss_pred eecCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCC
Q 021121 4 FKTPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADG 83 (317)
Q Consensus 4 ~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 83 (317)
+.|...|++++|+| ++.++++++. ||.|+||+..... ......|...|.+++|+| + .+|++++.|+
T Consensus 14 ~gh~~~V~~lafsp--dg~~lAsgs~------Dg~I~lw~~~~~~----~~~~~~~~~~V~~l~fsp-g-~~L~S~s~D~ 79 (902)
T 2oaj_A 14 YGMSSKPIAAAFDF--TQNLLAIATV------TGEVHIYGQQQVE----VVIKLEDRSAIKEMRFVK-G-IYLVVINAKD 79 (902)
T ss_dssp EECSSCEEEEEEET--TTTEEEEEET------TSEEEEECSTTCE----EEEECSSCCCEEEEEEET-T-TEEEEEETTC
T ss_pred cCCCCCcEEEEECC--CCCEEEEEeC------CCEEEEEeCCCcE----EEEEcCCCCCEEEEEEcC-C-CEEEEEECcC
Confidence 45788999999999 5777777775 9999999976542 333446788999999999 6 4999999999
Q ss_pred eEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCcee-----------EEeeccccce
Q 021121 84 SVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSV-----------RTFKEHAYCV 152 (317)
Q Consensus 84 ~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~-----------~~~~~~~~~v 152 (317)
.|++||+..+ +.+..+. |...|++++|+|++. ++++|+.||.|++||+++++.. ..+.+|.++|
T Consensus 80 ~v~lWd~~~~---~~~~~~~-~~~~V~~v~~sp~g~-~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V 154 (902)
T 2oaj_A 80 TVYVLSLYSQ---KVLTTVF-VPGKITSIDTDASLD-WMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPI 154 (902)
T ss_dssp EEEEEETTTC---SEEEEEE-CSSCEEEEECCTTCS-EEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCC
T ss_pred eEEEEECCCC---cEEEEEc-CCCCEEEEEECCCCC-EEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCe
Confidence 9999999876 5555554 678999999999998 9999999999999999987653 2235688899
Q ss_pred EEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeeccC------------------ccceEEEEecCCCCcEEEEEecC
Q 021121 153 YNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAH------------------EFEILACDWNKYDDCLIASASVD 214 (317)
Q Consensus 153 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~------------------~~~v~~i~~~~~~~~~l~~~~~d 214 (317)
.+++|+|++...+++++.||.| +||+++++.+..+..| ...|.+++|+| ++++|++++.|
T Consensus 155 ~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fsp-dg~~lasgs~D 232 (902)
T 2oaj_A 155 VSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHP-NSLHIITIHED 232 (902)
T ss_dssp CEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECT-TSSEEEEEETT
T ss_pred EEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcC-CCCEEEEEECC
Confidence 9999999756889999999999 9999998887777654 46799999999 89999999999
Q ss_pred CcEEEEEccCCCccEEE--E---ec-------------CCCceeEEEec----CCCCeeEEeeecC
Q 021121 215 KSIKIWDVRNYRVPIAV--L---NG-------------HGYAVRKVKFS----PHRRNLLASCSYD 258 (317)
Q Consensus 215 ~~i~v~d~~~~~~~~~~--~---~~-------------~~~~v~~~~~~----~~~~~~l~~~~~d 258 (317)
+.|++||+++++. +.. + .. |..+|++++|+ |++..+|++|+.|
T Consensus 233 g~i~lWd~~~g~~-~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~ 297 (902)
T 2oaj_A 233 NSLVFWDANSGHM-IMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSI 297 (902)
T ss_dssp CCEEEEETTTCCE-EEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECS
T ss_pred CeEEEEECCCCcE-EEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCC
Confidence 9999999988653 332 1 11 34578999995 4433456666543
No 76
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=3.6e-38 Score=268.57 Aligned_cols=276 Identities=19% Similarity=0.322 Sum_probs=236.4
Q ss_pred cCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeE
Q 021121 6 TPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSV 85 (317)
Q Consensus 6 ~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 85 (317)
|...|.+++|++ +.+++++. ||.|++||+..... ......|...|.+++|++ ..+++|+.||.|
T Consensus 158 h~~~v~~~~~~~---~~l~s~~~-------dg~i~vwd~~~~~~---~~~~~~h~~~v~~~~~~~---~~l~s~s~dg~i 221 (445)
T 2ovr_B 158 HTGGVWSSQMRD---NIIISGST-------DRTLKVWNAETGEC---IHTLYGHTSTVRCMHLHE---KRVVSGSRDATL 221 (445)
T ss_dssp CSSCEEEEEEET---TEEEEEET-------TSCEEEEETTTTEE---EEEECCCSSCEEEEEEET---TEEEEEETTSEE
T ss_pred CCCCEEEEEecC---CEEEEEeC-------CCeEEEEECCcCcE---EEEECCCCCcEEEEEecC---CEEEEEeCCCEE
Confidence 678899999986 44444444 99999999987642 122236888999999963 479999999999
Q ss_pred EEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeeccccceEEEEEecCCCCeE
Q 021121 86 KIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVF 165 (317)
Q Consensus 86 ~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 165 (317)
++||+..+ +....+..|...|.+++| ++. ++++++.||.|++||+++++.+..+..|...+.++.| + +..+
T Consensus 222 ~~wd~~~~---~~~~~~~~~~~~v~~~~~--~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~-~~~l 292 (445)
T 2ovr_B 222 RVWDIETG---QCLHVLMGHVAAVRCVQY--DGR-RVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--D-GIHV 292 (445)
T ss_dssp EEEESSSC---CEEEEEECCSSCEEEEEE--CSS-CEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--C-SSEE
T ss_pred EEEECCCC---cEEEEEcCCcccEEEEEE--CCC-EEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--C-CCEE
Confidence 99999876 677788899999999999 455 8999999999999999999999999999999999999 4 7899
Q ss_pred EEEeCCCeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEec---CCCceeEE
Q 021121 166 CSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNG---HGYAVRKV 242 (317)
Q Consensus 166 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~---~~~~v~~~ 242 (317)
++++.||.|++||+++++.+..+..|...+.++.++ ++++++++.||.|++||+++++ ++..+.. |...|+++
T Consensus 293 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~dg~i~vwd~~~~~-~~~~~~~~~~~~~~v~~~ 368 (445)
T 2ovr_B 293 VSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK---DNILVSGNADSTVKIWDIKTGQ-CLQTLQGPNKHQSAVTCL 368 (445)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE---TTEEEEEETTSCEEEEETTTCC-EEEEECSTTSCSSCEEEE
T ss_pred EEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEe---CCEEEEEeCCCeEEEEECCCCc-EEEEEccCCCCCCCEEEE
Confidence 999999999999999999999999999999988875 4689999999999999998866 4666665 88899999
Q ss_pred EecCCCCeeEEeeecCCeEEEEecccccceeeee-----ecccceeEeEEEEeccCCeEEEeecCCc----EEEEecCCC
Q 021121 243 KFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRY-----DHHTEFAVGVDMSVLVEGLLASTGWDEL----VYVWQQGMD 313 (317)
Q Consensus 243 ~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~~l~s~~~dg~----i~~w~~~~~ 313 (317)
+|++ + +|++++.||.|++||+.+++ .+..+ ..|.+.|.+++|+|+ +.++++|+.||. |.+||++.+
T Consensus 369 ~~~~--~-~l~s~~~dg~v~iwd~~~~~-~~~~~~~~~~~~~~~~v~~~~~s~~-~~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 369 QFNK--N-FVITSSDDGTVKLWDLKTGE-FIRNLVTLESGGSGGVVWRIRASNT-KLVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp EECS--S-EEEEEETTSEEEEEETTTCC-EEEEEEECTTGGGTCEEEEEEECSS-EEEEEEECSSSSSCCEEEEEECCCC
T ss_pred EECC--C-EEEEEeCCCeEEEEECCCCc-eeeeeeccccCCCCceEEEEEecCC-EEEEEEcccCCCCccEEEEEECCCC
Confidence 9964 4 79999999999999999887 44444 478889999999998 789999999998 999999987
Q ss_pred CC
Q 021121 314 PR 315 (317)
Q Consensus 314 ~~ 315 (317)
++
T Consensus 444 ~~ 445 (445)
T 2ovr_B 444 MK 445 (445)
T ss_dssp C-
T ss_pred CC
Confidence 64
No 77
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=9e-39 Score=263.02 Aligned_cols=253 Identities=15% Similarity=0.255 Sum_probs=212.2
Q ss_pred cCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeee-ecCCCCeeEEEecC--CCCCeEEEEEcC
Q 021121 6 TPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVA-FDTADGVYDLAWSE--SHDSLLIAAVAD 82 (317)
Q Consensus 6 ~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~--~~~~~l~~~~~d 82 (317)
|...|++++|+| ++.++++++. ||.|++||+............ ..|...|.+++|+| ++ .+|++|+.|
T Consensus 10 H~~~v~~~~~~~--~~~~l~~~~~------dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~-~~l~s~~~d 80 (351)
T 3f3f_A 10 HDDLVHDVVYDF--YGRHVATCSS------DQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYG-RIIASASYD 80 (351)
T ss_dssp CSSCEEEEEECS--SSSEEEEEET------TSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGC-SEEEEEETT
T ss_pred cccceeEEEEcC--CCCEEEEeeC------CCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCC-CEEEEEcCC
Confidence 788999999999 5666666665 999999999876543333333 36889999999999 45 699999999
Q ss_pred CeEEEEEeCCCCCC------CCceeeccCCcceEEEEEecC--CCCEEEEEcCCCEEEEEEcCCCceeEEee--------
Q 021121 83 GSVKIYDTALPPTA------NPIRSLHEHTREVHSADYNPT--RRDSFITSSWDDTVKLWTVDRPTSVRTFK-------- 146 (317)
Q Consensus 83 g~i~v~~~~~~~~~------~~~~~~~~~~~~v~~~~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~-------- 146 (317)
|.|++||+..+... +....+..|...|.+++|+|+ +. ++++++.||.|++||+++++.+..+.
T Consensus 81 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~ 159 (351)
T 3f3f_A 81 KTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGL-KLACLGNDGILRLYDALEPSDLRSWTLTSEMKVL 159 (351)
T ss_dssp SCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCS-EEEEEETTCEEEEEECSSTTCTTCCEEEEEEESC
T ss_pred CeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCc-EEEEecCCCcEEEecCCChHHhcccccccccccc
Confidence 99999999865221 335667789999999999999 77 99999999999999999886554432
Q ss_pred -----ccccceEEEEEecC--CCCeEEEEeCCCeEEEEeCCCCCc--eeeeccCccceEEEEecCCCC----cEEEEEec
Q 021121 147 -----EHAYCVYNATWNPR--HSDVFCSASGDCTLRIWDVREMGS--TMIIPAHEFEILACDWNKYDD----CLIASASV 213 (317)
Q Consensus 147 -----~~~~~v~~~~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~v~~i~~~~~~~----~~l~~~~~ 213 (317)
.+...+.+++|+|+ .+.++++++.++.+.+|+...++. ...+..|...|.+++|+| ++ ++|++++.
T Consensus 160 ~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p-~~~~~~~~l~s~~~ 238 (351)
T 3f3f_A 160 SIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAP-SIGRWYQLIATGCK 238 (351)
T ss_dssp SCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECC-CSSCSSEEEEEEET
T ss_pred ccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECC-CCCCcceEEEEEcC
Confidence 46778999999996 478999999999998888877664 566778999999999999 76 89999999
Q ss_pred CCcEEEEEccCCC---------------------------------------------ccEEEEecCCCceeEEEecCCC
Q 021121 214 DKSIKIWDVRNYR---------------------------------------------VPIAVLNGHGYAVRKVKFSPHR 248 (317)
Q Consensus 214 d~~i~v~d~~~~~---------------------------------------------~~~~~~~~~~~~v~~~~~~~~~ 248 (317)
||.|++||++... .++..+.+|...|++++|+|++
T Consensus 239 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~ 318 (351)
T 3f3f_A 239 DGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTG 318 (351)
T ss_dssp TSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSS
T ss_pred CCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCC
Confidence 9999999998742 3456677899999999999999
Q ss_pred CeeEEeeecCCeEEEEeccccc
Q 021121 249 RNLLASCSYDMTVCLWDFMVED 270 (317)
Q Consensus 249 ~~~l~~~~~d~~i~vwd~~~~~ 270 (317)
+ +|++++.||.|++||+.+++
T Consensus 319 ~-~l~s~~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 319 T-ILSSAGDDGKVRLWKATYSN 339 (351)
T ss_dssp C-CEEEEETTSCEEEEEECTTS
T ss_pred C-EEEEecCCCcEEEEecCcCc
Confidence 8 79999999999999998875
No 78
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.3e-40 Score=277.65 Aligned_cols=244 Identities=16% Similarity=0.196 Sum_probs=201.7
Q ss_pred CCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCC
Q 021121 59 TADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDR 138 (317)
Q Consensus 59 ~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~ 138 (317)
+.++|++++|+|++ .+|++|+.|+.|++|++..+ ..+....+.+|...|.+++|+|+++ +|++++.||.|++||+.+
T Consensus 10 ~~~~v~~~~~s~~g-~~l~~~~~d~~i~iw~~~~~-~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~s~d~~v~vwd~~~ 86 (377)
T 3dwl_C 10 LPKPSYEHAFNSQR-TEFVTTTATNQVELYEQDGN-GWKHARTFSDHDKIVTCVDWAPKSN-RIVTCSQDRNAYVYEKRP 86 (377)
T ss_dssp CSSCCSCCEECSSS-SEEECCCSSSCBCEEEEETT-EEEECCCBCCCSSCEEEEEECTTTC-CEEEEETTSSEEEC----
T ss_pred CCCcEEEEEECCCC-CEEEEecCCCEEEEEEccCC-ceEEEEEEecCCceEEEEEEeCCCC-EEEEEeCCCeEEEEEcCC
Confidence 56789999999998 69999999999999999853 1145667788999999999999987 999999999999999998
Q ss_pred Cc---eeEEeeccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCC---ceeeecc-CccceEEEEecCCCCcEEEEE
Q 021121 139 PT---SVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMG---STMIIPA-HEFEILACDWNKYDDCLIASA 211 (317)
Q Consensus 139 ~~---~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~-~~~~v~~i~~~~~~~~~l~~~ 211 (317)
++ ....+..|...|.+++|+|+ +++|++++.|+.|++||+++++ ....+.. |...|.+++|+| ++++|+++
T Consensus 87 ~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~~~ 164 (377)
T 3dwl_C 87 DGTWKQTLVLLRLNRAATFVRWSPN-EDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHP-NNVLLAAG 164 (377)
T ss_dssp --CCCCEEECCCCSSCEEEEECCTT-SSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECT-TSSEEEEE
T ss_pred CCceeeeeEecccCCceEEEEECCC-CCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcC-CCCEEEEE
Confidence 77 66677789999999999998 8899999999999999999876 3667776 899999999999 99999999
Q ss_pred ecCCcEEEEEccCCC-----------------ccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccc---
Q 021121 212 SVDKSIKIWDVRNYR-----------------VPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDA--- 271 (317)
Q Consensus 212 ~~d~~i~v~d~~~~~-----------------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~--- 271 (317)
+.|+.|++||++... .++..+ .|...|++++|+|+++ +|++++.||.|++||+.+++.
T Consensus 165 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~-~l~~~~~d~~i~iwd~~~~~~~~~ 242 (377)
T 3dwl_C 165 CADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGN-ALAYAGHDSSVTIAYPSAPEQPPR 242 (377)
T ss_dssp ESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSS-CEEEEETTTEEC-CEECSTTSCEE
T ss_pred eCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCC-EEEEEeCCCcEEEEECCCCCCcce
Confidence 999999999986321 123344 8999999999999998 799999999999999998874
Q ss_pred eeeeeecccceeEeEEEEeccCCeEEEeecCCcEEEEecC
Q 021121 272 LVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQG 311 (317)
Q Consensus 272 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~ 311 (317)
.+..+..|...|.+++|+|+ +.+|++++.++.+ +|+..
T Consensus 243 ~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 243 ALITVKLSQLPLRSLLWANE-SAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp ECCCEECSSSCEEEEEEEET-TEEEEEESSSSEE-EECCC
T ss_pred eeEeecCCCCceEEEEEcCC-CCEEEEEcCCcEE-EEEeC
Confidence 16778899999999999998 7888888766655 77765
No 79
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=6.9e-39 Score=266.46 Aligned_cols=246 Identities=20% Similarity=0.254 Sum_probs=213.7
Q ss_pred cCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcC
Q 021121 58 DTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVD 137 (317)
Q Consensus 58 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~ 137 (317)
.|.++|++++|+|++ .+|++|+.|+.|++||+... .......+..|...|.+++|+|++. +|++++.||.|++||++
T Consensus 6 ~~~~~i~~~~~s~~~-~~l~~~~~d~~v~i~~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~-~l~~~~~dg~i~vwd~~ 82 (372)
T 1k8k_C 6 FLVEPISCHAWNKDR-TQIAICPNNHEVHIYEKSGN-KWVQVHELKEHNGQVTGVDWAPDSN-RIVTCGTDRNAYVWTLK 82 (372)
T ss_dssp SCSSCCCEEEECTTS-SEEEEECSSSEEEEEEEETT-EEEEEEEEECCSSCEEEEEEETTTT-EEEEEETTSCEEEEEEE
T ss_pred ccCCCeEEEEECCCC-CEEEEEeCCCEEEEEeCCCC-cEEeeeeecCCCCcccEEEEeCCCC-EEEEEcCCCeEEEEECC
Confidence 377899999999998 69999999999999999865 1126777889999999999999988 99999999999999998
Q ss_pred CCceeEEe--eccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCc---e-eeeccCccceEEEEecCCCCcEEEEE
Q 021121 138 RPTSVRTF--KEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGS---T-MIIPAHEFEILACDWNKYDDCLIASA 211 (317)
Q Consensus 138 ~~~~~~~~--~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~---~-~~~~~~~~~v~~i~~~~~~~~~l~~~ 211 (317)
+++....+ ..|...|.+++|+|+ ++++++++.|+.|++||++..+. . .....|...+.+++|+| ++++++++
T Consensus 83 ~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~ 160 (372)
T 1k8k_C 83 GRTWKPTLVILRINRAARCVRWAPN-EKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHP-NSVLLAAG 160 (372)
T ss_dssp TTEEEEEEECCCCSSCEEEEEECTT-SSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECT-TSSEEEEE
T ss_pred CCeeeeeEEeecCCCceeEEEECCC-CCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcC-CCCEEEEE
Confidence 88654443 568889999999998 89999999999999999998764 2 23356788999999999 99999999
Q ss_pred ecCCcEEEEEccC-----------------CCccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceee
Q 021121 212 SVDKSIKIWDVRN-----------------YRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVG 274 (317)
Q Consensus 212 ~~d~~i~v~d~~~-----------------~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~ 274 (317)
+.|+.|++||++. ...++..+..|...|.+++|+|+++ +|++++.|+.|++||+++++ .+.
T Consensus 161 ~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~-~~~ 238 (372)
T 1k8k_C 161 SCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGS-RVAWVSHDSTVCLADADKKM-AVA 238 (372)
T ss_dssp ETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSS-EEEEEETTTEEEEEEGGGTT-EEE
T ss_pred cCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCC-EEEEEeCCCEEEEEECCCCc-eeE
Confidence 9999999999641 1235677778999999999999998 79999999999999999886 667
Q ss_pred eeecccceeEeEEEEeccCCeEEEeecCCcEEEEecCC
Q 021121 275 RYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGM 312 (317)
Q Consensus 275 ~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~ 312 (317)
.+..|...|.+++|+|+ +.+|+++ .|+.|++|++..
T Consensus 239 ~~~~~~~~v~~~~~~~~-~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 239 TLASETLPLLAVTFITE-SSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp EEECSSCCEEEEEEEET-TEEEEEE-TTSSCEEEEEET
T ss_pred EEccCCCCeEEEEEecC-CCEEEEE-eCCeEEEEEccC
Confidence 88899999999999998 6677766 899999999976
No 80
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.3e-38 Score=264.14 Aligned_cols=285 Identities=16% Similarity=0.190 Sum_probs=227.2
Q ss_pred cCcceeEEEEecCC-CCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCe
Q 021121 6 TPFNGYSVKFSPFY-ESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGS 84 (317)
Q Consensus 6 ~~~~v~~~~~~p~~-~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 84 (317)
|...|++++|+|+. ++.++++++. ||.|++||+....... ......|...|.+++|+|++ .+|++++.||.
T Consensus 38 h~~~v~~~~~~~~~~~g~~l~~~~~------dg~i~iw~~~~~~~~~-~~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg~ 109 (368)
T 3mmy_A 38 PDDSIGCLSFSPPTLPGNFLIAGSW------ANDVRCWEVQDSGQTI-PKAQQMHTGPVLDVCWSDDG-SKVFTASCDKT 109 (368)
T ss_dssp CSSCEEEEEECCTTSSSEEEEEEET------TSEEEEEEECTTSCEE-EEEEEECSSCEEEEEECTTS-SEEEEEETTSE
T ss_pred CCCceEEEEEcCCCCCceEEEEECC------CCcEEEEEcCCCCcee-EEEeccccCCEEEEEECcCC-CEEEEEcCCCc
Confidence 77899999999942 0467777665 9999999998743222 23334789999999999997 69999999999
Q ss_pred EEEEEeCCCCCCCCceeeccCCcceEEEEE--ecCCCCEEEEEcCCCEEEEEEcCCCceeEEeeccccceEEEEEecCCC
Q 021121 85 VKIYDTALPPTANPIRSLHEHTREVHSADY--NPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHS 162 (317)
Q Consensus 85 i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 162 (317)
|++||+... .. ..+..|...|.+++| +|++. ++++++.||.|++||+++++.+..+..+. .+.++.+. .
T Consensus 110 v~iwd~~~~---~~-~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~---~ 180 (368)
T 3mmy_A 110 AKMWDLSSN---QA-IQIAQHDAPVKTIHWIKAPNYS-CVMTGSWDKTLKFWDTRSSNPMMVLQLPE-RCYCADVI---Y 180 (368)
T ss_dssp EEEEETTTT---EE-EEEEECSSCEEEEEEEECSSCE-EEEEEETTSEEEEECSSCSSCSEEEECSS-CEEEEEEE---T
T ss_pred EEEEEcCCC---Cc-eeeccccCceEEEEEEeCCCCC-EEEEccCCCcEEEEECCCCcEEEEEecCC-CceEEEec---C
Confidence 999999865 33 335679999999999 88877 89999999999999999999988888654 57777776 4
Q ss_pred CeEEEEeCCCeEEEEeCCCCCceeeec--cCccceEEEEecCCCC----cEEEEEecCCcEEEEEccCCC--ccEEEEec
Q 021121 163 DVFCSASGDCTLRIWDVREMGSTMIIP--AHEFEILACDWNKYDD----CLIASASVDKSIKIWDVRNYR--VPIAVLNG 234 (317)
Q Consensus 163 ~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~v~~i~~~~~~~----~~l~~~~~d~~i~v~d~~~~~--~~~~~~~~ 234 (317)
..+++++.++.+++||++......... .+.....++.+.+ .. ..+++++.|+.|++||++... .....+..
T Consensus 181 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~ 259 (368)
T 3mmy_A 181 PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFK-DKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKC 259 (368)
T ss_dssp TEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEE-CTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEEC
T ss_pred CeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcc-cCCCCCCeEEEecCCCcEEEEecCCCCccccceeeee
Confidence 478889999999999998765433222 2233445555544 33 339999999999999998763 34566677
Q ss_pred CCC------------ceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEeecC
Q 021121 235 HGY------------AVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWD 302 (317)
Q Consensus 235 ~~~------------~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d 302 (317)
|.. .|++++|+|+++ +|++++.||.|++||+.+++ .+..+..|...|.+++|+|+ +.+|++++.|
T Consensus 260 ~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~v~~~~~s~~-g~~l~~~s~d 336 (368)
T 3mmy_A 260 HRSNGTNTSAPQDIYAVNGIAFHPVHG-TLATVGSDGRFSFWDKDART-KLKTSEQLDQPISACCFNHN-GNIFAYASSY 336 (368)
T ss_dssp SEEC----CCCEEECCEEEEEECTTTC-CEEEEETTSCEEEEETTTTE-EEEECCCCSSCEEEEEECTT-SSCEEEEECC
T ss_pred eecccccccccccccceEEEEEecCCC-EEEEEccCCeEEEEECCCCc-EEEEecCCCCCceEEEECCC-CCeEEEEecc
Confidence 765 799999999998 79999999999999999876 56788899999999999999 8899999988
Q ss_pred CcEEEEecC
Q 021121 303 ELVYVWQQG 311 (317)
Q Consensus 303 g~i~~w~~~ 311 (317)
+..+.|++-
T Consensus 337 ~~~~~~~~~ 345 (368)
T 3mmy_A 337 DWSKGHEFY 345 (368)
T ss_dssp CSTTCGGGC
T ss_pred ccccccccc
Confidence 866666543
No 81
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=9e-39 Score=286.47 Aligned_cols=248 Identities=23% Similarity=0.316 Sum_probs=212.6
Q ss_pred ecCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCC--CCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEE
Q 021121 57 FDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTA--NPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLW 134 (317)
Q Consensus 57 ~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iw 134 (317)
..|.+.|++++|+|++..+|++|+.|++|++|++...... .....+.+|...|.+++|+|+++ +|++|+.||.|++|
T Consensus 379 ~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~-~l~sgs~Dg~v~vw 457 (694)
T 3dm0_A 379 RAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQ-FALSGSWDGELRLW 457 (694)
T ss_dssp ECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSS-EEEEEETTSEEEEE
T ss_pred ccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCC-EEEEEeCCCcEEEE
Confidence 3799999999999987779999999999999999764221 23456789999999999999998 99999999999999
Q ss_pred EcCCCceeEEeeccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeee---ccCccceEEEEecCCCC--cEEE
Q 021121 135 TVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMII---PAHEFEILACDWNKYDD--CLIA 209 (317)
Q Consensus 135 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~---~~~~~~v~~i~~~~~~~--~~l~ 209 (317)
|+.+++....+.+|...|.+++|+|+ +.+|++++.|++|++||.......... .+|...|.+++|+| ++ ..++
T Consensus 458 d~~~~~~~~~~~~h~~~v~~~~~s~~-~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~~l~ 535 (694)
T 3dm0_A 458 DLAAGVSTRRFVGHTKDVLSVAFSLD-NRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSP-NTLQPTIV 535 (694)
T ss_dssp ETTTTEEEEEEECCSSCEEEEEECTT-SSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECS-CSSSCEEE
T ss_pred ECCCCcceeEEeCCCCCEEEEEEeCC-CCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeC-CCCcceEE
Confidence 99999999999999999999999999 889999999999999998654332222 36788899999999 54 6899
Q ss_pred EEecCCcEEEEEccCCCccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEE
Q 021121 210 SASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMS 289 (317)
Q Consensus 210 ~~~~d~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~ 289 (317)
+++.|+.|++||+++.+ ....+.+|...|++++|+|+++ +|++++.||.|++||+++++. +..+.. ...|.+++|+
T Consensus 536 s~s~d~~v~vwd~~~~~-~~~~~~~h~~~v~~v~~spdg~-~l~sg~~Dg~i~iwd~~~~~~-~~~~~~-~~~v~~~~~s 611 (694)
T 3dm0_A 536 SASWDKTVKVWNLSNCK-LRSTLAGHTGYVSTVAVSPDGS-LCASGGKDGVVLLWDLAEGKK-LYSLEA-NSVIHALCFS 611 (694)
T ss_dssp EEETTSCEEEEETTTCC-EEEEECCCSSCEEEEEECTTSS-EEEEEETTSBCEEEETTTTEE-EECCBC-SSCEEEEEEC
T ss_pred EEeCCCeEEEEECCCCc-EEEEEcCCCCCEEEEEEeCCCC-EEEEEeCCCeEEEEECCCCce-EEEecC-CCcEEEEEEc
Confidence 99999999999999865 4778889999999999999998 799999999999999998873 344443 4679999999
Q ss_pred eccCCeEEEeecCCcEEEEecCCC
Q 021121 290 VLVEGLLASTGWDELVYVWQQGMD 313 (317)
Q Consensus 290 ~~~~~~l~s~~~dg~i~~w~~~~~ 313 (317)
|+ +.+|+++ .|+.|++||+...
T Consensus 612 p~-~~~l~~~-~~~~i~iwd~~~~ 633 (694)
T 3dm0_A 612 PN-RYWLCAA-TEHGIKIWDLESK 633 (694)
T ss_dssp SS-SSEEEEE-ETTEEEEEETTTT
T ss_pred CC-CcEEEEE-cCCCEEEEECCCC
Confidence 97 6666655 4667999999764
No 82
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=7.7e-38 Score=267.88 Aligned_cols=280 Identities=18% Similarity=0.240 Sum_probs=231.3
Q ss_pred cCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecC--CCCCeEEEEEcCC
Q 021121 6 TPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSE--SHDSLLIAAVADG 83 (317)
Q Consensus 6 ~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~l~~~~~dg 83 (317)
|...|.+++|+| ++.+ ++++. ||.|++||+..... ......|...|.+++|++ ++ .++++|+.||
T Consensus 161 h~~~V~~l~~~~--~~~l-~s~s~------dg~i~vwd~~~~~~---~~~~~~h~~~v~~l~~~~~~~~-~~l~s~s~d~ 227 (464)
T 3v7d_B 161 HDGGVWALKYAH--GGIL-VSGST------DRTVRVWDIKKGCC---THVFEGHNSTVRCLDIVEYKNI-KYIVTGSRDN 227 (464)
T ss_dssp CSSCEEEEEECS--TTEE-EEEET------TSCEEEEETTTTEE---EEEECCCSSCEEEEEEEESSSC-EEEEEEETTS
T ss_pred CCcCEEEEEEcC--CCEE-EEEeC------CCCEEEEECCCCcE---EEEECCCCCccEEEEEecCCCC-CEEEEEcCCC
Confidence 788999999999 4544 44444 99999999987641 122236889999999995 54 6999999999
Q ss_pred eEEEEEeCCCCCCC--------------------CceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeE
Q 021121 84 SVKIYDTALPPTAN--------------------PIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVR 143 (317)
Q Consensus 84 ~i~v~~~~~~~~~~--------------------~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~ 143 (317)
.|++||+....... ....+.+|...+.++ ++++. ++++++.||.|++||+.+++.+.
T Consensus 228 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~-~l~~~~~d~~i~vwd~~~~~~~~ 304 (464)
T 3v7d_B 228 TLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGN-IVVSGSYDNTLIVWDVAQMKCLY 304 (464)
T ss_dssp CEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETT-EEEEEETTSCEEEEETTTTEEEE
T ss_pred cEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCC-EEEEEeCCCeEEEEECCCCcEEE
Confidence 99999998653221 144567888888887 45566 99999999999999999999999
Q ss_pred EeeccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEecCCcEEEEEcc
Q 021121 144 TFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVR 223 (317)
Q Consensus 144 ~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~ 223 (317)
.+..|...|.+++|+|+ ++.+++++.||.|++||+++++.+..+..|...+.+++++ ++++++++.||.|++||++
T Consensus 305 ~~~~~~~~v~~~~~~~~-~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~---~~~l~s~s~dg~v~vwd~~ 380 (464)
T 3v7d_B 305 ILSGHTDRIYSTIYDHE-RKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS---DKFLVSAAADGSIRGWDAN 380 (464)
T ss_dssp EECCCSSCEEEEEEETT-TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC---SSEEEEEETTSEEEEEETT
T ss_pred EecCCCCCEEEEEEcCC-CCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc---CCEEEEEeCCCcEEEEECC
Confidence 99999999999999998 8899999999999999999999999999999999999997 4689999999999999999
Q ss_pred CCCccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEeecCC
Q 021121 224 NYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDE 303 (317)
Q Consensus 224 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg 303 (317)
+... .... .+...+..++|+|++. ++++++ ||.|++||+++++.+......|...|.+++|+. +.++++++.||
T Consensus 381 ~~~~-~~~~-~~~~~~~~~~~~~~~~-~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~~--~~l~~~~~~~g 454 (464)
T 3v7d_B 381 DYSR-KFSY-HHTNLSAITTFYVSDN-ILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFKG--KTLVAAVEKDG 454 (464)
T ss_dssp TCCE-EEEE-ECTTCCCEEEEEECSS-EEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEEEEEEET--TEEEEEEEETT
T ss_pred CCce-eeee-cCCCCccEEEEEeCCC-EEEEec-CCeEEEEECCCCcEEehhhccCCCcEEEEEecC--CEEEEEEEeCC
Confidence 8664 2222 3666788899999998 688887 999999999998855445778899999999973 56777777888
Q ss_pred cEEEEecC
Q 021121 304 LVYVWQQG 311 (317)
Q Consensus 304 ~i~~w~~~ 311 (317)
.+.+|-++
T Consensus 455 ~~~i~~ld 462 (464)
T 3v7d_B 455 QSFLEILD 462 (464)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEee
Confidence 77666543
No 83
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=8.3e-39 Score=264.45 Aligned_cols=251 Identities=14% Similarity=0.246 Sum_probs=208.1
Q ss_pred eeecCCCCeeEEEecCCCCCeEEEEEc---CCeEEEEEeCCCCCCCCce-eeccCCcceEEEEEecCC--CCEEEEEcCC
Q 021121 55 VAFDTADGVYDLAWSESHDSLLIAAVA---DGSVKIYDTALPPTANPIR-SLHEHTREVHSADYNPTR--RDSFITSSWD 128 (317)
Q Consensus 55 ~~~~~~~~v~~~~~~~~~~~~l~~~~~---dg~i~v~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~--~~~l~~~~~d 128 (317)
....|...|.+++|+|+++.++++|+. ||.|++|++..+ +... ....|...|.+++|+|++ ..++++++.|
T Consensus 13 ~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d 89 (357)
T 3i2n_A 13 IQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHG---DLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFG 89 (357)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSS---SEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETT
T ss_pred hccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCC---cccceeeecccCcEEEEEEcCCCCCCceEEEecCC
Confidence 334699999999999998667777776 999999999865 3322 233689999999999983 2389999999
Q ss_pred CEEEEEEcCCCc-eeEEeeccccceEEEEE------ecCCCCeEEEEeCCCeEEEEeCCCCC-ceeeeccCcc----ceE
Q 021121 129 DTVKLWTVDRPT-SVRTFKEHAYCVYNATW------NPRHSDVFCSASGDCTLRIWDVREMG-STMIIPAHEF----EIL 196 (317)
Q Consensus 129 g~v~iwd~~~~~-~~~~~~~~~~~v~~~~~------~~~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~----~v~ 196 (317)
|.|++||+.+++ .+..+..|...|.++.| +|+ ++++++++.||.|++||+++++ ....+..+.. .+.
T Consensus 90 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~-~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~ 168 (357)
T 3i2n_A 90 GNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEG-APEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCW 168 (357)
T ss_dssp SCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-C-CCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEE
T ss_pred CeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCC-ccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceE
Confidence 999999999988 88899999999999966 566 8899999999999999999886 6677765544 788
Q ss_pred EEE----ecCCCCcEEEEEecCCcEEEEEccCCCccEEEEecCCCceeEEEecC---CCCeeEEeeecCCeEEEEecccc
Q 021121 197 ACD----WNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSP---HRRNLLASCSYDMTVCLWDFMVE 269 (317)
Q Consensus 197 ~i~----~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~l~~~~~d~~i~vwd~~~~ 269 (317)
+++ |+| +++++++++.|+.|++||+++.+. .....|...|.+++|+| ++. +|++++.||.|++||+++.
T Consensus 169 ~~~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~ 244 (357)
T 3i2n_A 169 TVAFGNAYNQ-EERVVCAGYDNGDIKLFDLRNMAL--RWETNIKNGVCSLEFDRKDISMN-KLVATSLEGKFHVFDMRTQ 244 (357)
T ss_dssp EEEEECCCC--CCCEEEEEETTSEEEEEETTTTEE--EEEEECSSCEEEEEESCSSSSCC-EEEEEESTTEEEEEEEEEE
T ss_pred EEEEEeccCC-CCCEEEEEccCCeEEEEECccCce--eeecCCCCceEEEEcCCCCCCCC-EEEEECCCCeEEEEeCcCC
Confidence 888 778 899999999999999999998663 44466888999999999 787 7999999999999999887
Q ss_pred ccee----eeeecccceeEeEEEEeccCCeEEEeecCCcEEEEecCCC
Q 021121 270 DALV----GRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGMD 313 (317)
Q Consensus 270 ~~~~----~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~ 313 (317)
+... .....|...|++++|+|++..+|++++.||.|++||+...
T Consensus 245 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 292 (357)
T 3i2n_A 245 HPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYP 292 (357)
T ss_dssp ETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECC
T ss_pred CcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCC
Confidence 6321 1234899999999999984348999999999999999754
No 84
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=7.5e-39 Score=268.67 Aligned_cols=245 Identities=17% Similarity=0.298 Sum_probs=214.2
Q ss_pred cCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCC---CCCceeeccCCcceEEEEEecC----C---CCEEEEEcC
Q 021121 58 DTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPT---ANPIRSLHEHTREVHSADYNPT----R---RDSFITSSW 127 (317)
Q Consensus 58 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~---~~~~~~~~~~~~~v~~~~~~~~----~---~~~l~~~~~ 127 (317)
.|.+.|++++|+| .+|++|+.||.|++|++...+. ......+..|...|.+++|+|+ + . +|++++.
T Consensus 14 ~h~~~i~~~~~~~---~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~-~l~s~~~ 89 (397)
T 1sq9_A 14 AHDADIFSVSACN---SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELC-LVATTSF 89 (397)
T ss_dssp CSSSCEEEEEECS---SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEE-EEEEEET
T ss_pred hhhcCeEEEEecC---CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCcccc-EEEEEcC
Confidence 6899999999998 4999999999999999987621 1256777899999999999999 7 7 9999999
Q ss_pred CCEEEEEEcCCCce-----eEEeecc-----ccceEEEEEe----cCCCCe-EEEEeCCCeEEEEeCCC------CCcee
Q 021121 128 DDTVKLWTVDRPTS-----VRTFKEH-----AYCVYNATWN----PRHSDV-FCSASGDCTLRIWDVRE------MGSTM 186 (317)
Q Consensus 128 dg~v~iwd~~~~~~-----~~~~~~~-----~~~v~~~~~~----~~~~~~-l~~~~~dg~i~i~d~~~------~~~~~ 186 (317)
||.|++||+.+++. ...+..| ...|.+++|+ |+ +.+ +++++.||.|++||+++ ++.+.
T Consensus 90 dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 168 (397)
T 1sq9_A 90 SGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRL-LSHRLVATDVKGTTYIWKFHPFADESNSLTLN 168 (397)
T ss_dssp TSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC-----CEEEEEEETTSCEEEEEEESSSSHHHHTTTC
T ss_pred CCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCC-CceEEEEEeCCCcEEEEeCCccccccccceee
Confidence 99999999998887 8888888 5899999999 88 788 99999999999999998 66665
Q ss_pred -----ee-------ccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEec---C---CCceeEEEecCCC
Q 021121 187 -----II-------PAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNG---H---GYAVRKVKFSPHR 248 (317)
Q Consensus 187 -----~~-------~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~---~---~~~v~~~~~~~~~ 248 (317)
.+ ..|...+.+++|+| ++ ++++++.|+.|++||+++.+ ++..+.. | ...|.+++|+|++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~-~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~h~~~~~~i~~i~~~~~~ 245 (397)
T 1sq9_A 169 WSPTLELQGTVESPMTPSQFATSVDISE-RG-LIATGFNNGTVQISELSTLR-PLYNFESQHSMINNSNSIRSVKFSPQG 245 (397)
T ss_dssp CCCEEEEEEEECCSSSSCCCCCEEEECT-TS-EEEEECTTSEEEEEETTTTE-EEEEEECCC---CCCCCEEEEEECSST
T ss_pred ccCcceeeeeeccccCCCCCceEEEECC-Cc-eEEEEeCCCcEEEEECCCCc-eeEEEeccccccccCCccceEEECCCC
Confidence 66 44788899999999 88 99999999999999999865 4777887 8 9999999999999
Q ss_pred CeeEEeeecC---CeEEEEecccccceeeeeec-------------ccceeEeEEEEeccCCeEEEeecCCcEEEEecCC
Q 021121 249 RNLLASCSYD---MTVCLWDFMVEDALVGRYDH-------------HTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGM 312 (317)
Q Consensus 249 ~~~l~~~~~d---~~i~vwd~~~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~ 312 (317)
+ +|++++.| +.|++||+++++ .+..+.. |...|.+++|+|+ +.+|++++.||.|++||+..
T Consensus 246 ~-~l~~~~~d~~~g~i~i~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~ 322 (397)
T 1sq9_A 246 S-LLAIAHDSNSFGCITLYETEFGE-RIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDS-GETLCSAGWDGKLRFWDVKT 322 (397)
T ss_dssp T-EEEEEEEETTEEEEEEEETTTCC-EEEEECBC--------CCBSBSSCEEEEEECSS-SSEEEEEETTSEEEEEETTT
T ss_pred C-EEEEEecCCCCceEEEEECCCCc-ccceeccCcccccccccccccCCcEEEEEECCC-CCEEEEEeCCCeEEEEEcCC
Confidence 8 79999999 999999999876 5567777 9999999999998 78999999999999999976
Q ss_pred C
Q 021121 313 D 313 (317)
Q Consensus 313 ~ 313 (317)
.
T Consensus 323 ~ 323 (397)
T 1sq9_A 323 K 323 (397)
T ss_dssp T
T ss_pred C
Confidence 4
No 85
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.9e-38 Score=301.24 Aligned_cols=288 Identities=15% Similarity=0.215 Sum_probs=244.2
Q ss_pred cCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCC-CCeEEEEEcCCe
Q 021121 6 TPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESH-DSLLIAAVADGS 84 (317)
Q Consensus 6 ~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~dg~ 84 (317)
|...|.+++|+| ++.++++++. ||.|++||+.+... .. ....|...|.+++|+|++ ..++++|+.||.
T Consensus 656 h~~~v~~~~~s~--~~~~l~s~~~------d~~v~vwd~~~~~~-~~--~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~ 724 (1249)
T 3sfz_A 656 HEDEVLCCAFSS--DDSYIATCSA------DKKVKIWDSATGKL-VH--TYDEHSEQVNCCHFTNKSNHLLLATGSNDFF 724 (1249)
T ss_dssp CSSCEEEEEECT--TSSEEEEEET------TSEEEEEETTTCCE-EE--EEECCSSCEEEEEECSSSSCCEEEEEETTSC
T ss_pred CCCCEEEEEEec--CCCEEEEEeC------CCeEEEEECCCCce-EE--EEcCCCCcEEEEEEecCCCceEEEEEeCCCe
Confidence 678999999999 5667777665 99999999987652 22 223688999999999953 358899999999
Q ss_pred EEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEe-------------------
Q 021121 85 VKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTF------------------- 145 (317)
Q Consensus 85 i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~------------------- 145 (317)
|++||+..+ .....+.+|...|.+++|+|++. ++++++.||.|++||+.+++....+
T Consensus 725 v~vwd~~~~---~~~~~~~~h~~~v~~~~~sp~~~-~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (1249)
T 3sfz_A 725 LKLWDLNQK---ECRNTMFGHTNSVNHCRFSPDDE-LLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVI 800 (1249)
T ss_dssp EEEEETTSS---SEEEEECCCSSCEEEEEECSSTT-EEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCC
T ss_pred EEEEECCCc---chhheecCCCCCEEEEEEecCCC-EEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccce
Confidence 999999876 67778889999999999999998 9999999999999999776443322
Q ss_pred ------------------------------------eccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeec
Q 021121 146 ------------------------------------KEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIP 189 (317)
Q Consensus 146 ------------------------------------~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 189 (317)
..|...+.+++|+|+ +.++++++.||.|++||+.++.....+.
T Consensus 801 v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~-~~~l~~~~~dg~v~vwd~~~~~~~~~~~ 879 (1249)
T 3sfz_A 801 VKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPY-DHLAVIALSQYCVELWNIDSRLKVADCR 879 (1249)
T ss_dssp BCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSS-TTEEEEECSSSCEEEEETTTTEEEEEEC
T ss_pred EEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCceeeecC
Confidence 156678899999998 8999999999999999999999999999
Q ss_pred cCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCc----------------------------cEE--------EEe
Q 021121 190 AHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRV----------------------------PIA--------VLN 233 (317)
Q Consensus 190 ~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~----------------------------~~~--------~~~ 233 (317)
+|...|.+++|+| +++.+++++.|+.|++||+.+... ... ...
T Consensus 880 ~h~~~v~~v~~sp-dg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 958 (1249)
T 3sfz_A 880 GHLSWVHGVMFSP-DGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDY 958 (1249)
T ss_dssp CCSSCEEEEEECT-TSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEE
T ss_pred CCccceEEEEECC-CCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEE
Confidence 9999999999999 999999999999999999764210 000 011
Q ss_pred cCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEeecCCcEEEEecCCC
Q 021121 234 GHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGMD 313 (317)
Q Consensus 234 ~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~ 313 (317)
.+...+.+++|+|+++ ++++|+.+|.|++||+.+++ ....+.+|...|.+++|+|+ +.+|++++.||.|++|++...
T Consensus 959 ~~~~~i~~~~~sp~g~-~l~~g~~~g~i~i~d~~~~~-~~~~~~~h~~~v~~l~~s~d-g~~l~s~~~dg~i~vwd~~~~ 1035 (1249)
T 3sfz_A 959 LPEAQVSCCCLSPHLE-YVAFGDEDGAIKIIELPNNR-VFSSGVGHKKAVRHIQFTAD-GKTLISSSEDSVIQVWNWQTG 1035 (1249)
T ss_dssp ECCSCEEEEEECTTSS-EEEEEETTSCCEEEETTTTS-CEEECCCCSSCCCCEEECSS-SSCEEEECSSSBEEEEETTTT
T ss_pred cccCcEEEEEEcCCCC-EEEEEcCCCCEEEEEcCCCc-eeeecccCCCceEEEEECCC-CCEEEEEcCCCEEEEEECCCC
Confidence 2345789999999998 79999999999999999876 56778899999999999999 889999999999999998764
No 86
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=2e-37 Score=264.01 Aligned_cols=273 Identities=18% Similarity=0.339 Sum_probs=231.0
Q ss_pred cCcce-eEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCe
Q 021121 6 TPFNG-YSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGS 84 (317)
Q Consensus 6 ~~~~v-~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 84 (317)
|...+ .+++++ +.++++++. ||.|++||+.+... . .....|...|.+++|++ .++++|+.||.
T Consensus 117 h~~~v~~~~~~~----g~~l~sg~~------dg~i~vwd~~~~~~-~--~~~~~h~~~v~~~~~~~---~~l~s~~~dg~ 180 (445)
T 2ovr_B 117 HDDHVITCLQFC----GNRIVSGSD------DNTLKVWSAVTGKC-L--RTLVGHTGGVWSSQMRD---NIIISGSTDRT 180 (445)
T ss_dssp STTSCEEEEEEE----TTEEEEEET------TSCEEEEETTTCCE-E--EECCCCSSCEEEEEEET---TEEEEEETTSC
T ss_pred cCCCcEEEEEEc----CCEEEEEEC------CCcEEEEECCCCcE-E--EEEcCCCCCEEEEEecC---CEEEEEeCCCe
Confidence 44444 444443 344555554 99999999987652 2 22236889999999983 49999999999
Q ss_pred EEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeeccccceEEEEEecCCCCe
Q 021121 85 VKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDV 164 (317)
Q Consensus 85 i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 164 (317)
|++||+.++ +....+.+|...|.++.|++ . .+++++.||.|++||+++++.+..+..|...+.+++| + +..
T Consensus 181 i~vwd~~~~---~~~~~~~~h~~~v~~~~~~~--~-~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~-~~~ 251 (445)
T 2ovr_B 181 LKVWNAETG---ECIHTLYGHTSTVRCMHLHE--K-RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--D-GRR 251 (445)
T ss_dssp EEEEETTTT---EEEEEECCCSSCEEEEEEET--T-EEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--C-SSC
T ss_pred EEEEECCcC---cEEEEECCCCCcEEEEEecC--C-EEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--C-CCE
Confidence 999999876 67788889999999999973 3 8999999999999999999999999999999999999 3 778
Q ss_pred EEEEeCCCeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEecCCCceeEEEe
Q 021121 165 FCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKF 244 (317)
Q Consensus 165 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~ 244 (317)
+++++.||.|++||+++++.+..+..|...+.++.| ++.++++++.|+.|++||+++++ ++..+.+|...+.++.+
T Consensus 252 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~v~~~~~ 327 (445)
T 2ovr_B 252 VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF---DGIHVVSGSLDTSIRVWDVETGN-CIHTLTGHQSLTSGMEL 327 (445)
T ss_dssp EEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE---CSSEEEEEETTSCEEEEETTTCC-EEEEECCCCSCEEEEEE
T ss_pred EEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE---CCCEEEEEeCCCeEEEEECCCCC-EEEEEcCCcccEEEEEE
Confidence 999999999999999999999999999999999998 56789999999999999999876 47888899999998888
Q ss_pred cCCCCeeEEeeecCCeEEEEecccccceeeeeec---ccceeEeEEEEeccCCeEEEeecCCcEEEEecCCCC
Q 021121 245 SPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDH---HTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGMDP 314 (317)
Q Consensus 245 ~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~ 314 (317)
+ +. ++++++.||.|++||+++++ ....+.. |...|.+++|+ +.+|++++.||.|++||+....
T Consensus 328 ~--~~-~l~~~~~dg~i~vwd~~~~~-~~~~~~~~~~~~~~v~~~~~~---~~~l~s~~~dg~v~iwd~~~~~ 393 (445)
T 2ovr_B 328 K--DN-ILVSGNADSTVKIWDIKTGQ-CLQTLQGPNKHQSAVTCLQFN---KNFVITSSDDGTVKLWDLKTGE 393 (445)
T ss_dssp E--TT-EEEEEETTSCEEEEETTTCC-EEEEECSTTSCSSCEEEEEEC---SSEEEEEETTSEEEEEETTTCC
T ss_pred e--CC-EEEEEeCCCeEEEEECCCCc-EEEEEccCCCCCCCEEEEEEC---CCEEEEEeCCCeEEEEECCCCc
Confidence 5 44 79999999999999998876 4556655 88899999996 5799999999999999998653
No 87
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-37 Score=258.34 Aligned_cols=251 Identities=18% Similarity=0.273 Sum_probs=220.4
Q ss_pred ceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCE
Q 021121 51 LTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDT 130 (317)
Q Consensus 51 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 130 (317)
.+.....+|...|++++|+|++ .+|++|+.||.|++||+..+ +.+..+..|...|.+++|+|+++ +|++++.||.
T Consensus 23 ~~~~~l~~h~~~v~~~~~s~~~-~~l~~~~~dg~i~vwd~~~~---~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~dg~ 97 (369)
T 3zwl_B 23 MKAIKLTGHERPLTQVKYNKEG-DLLFSCSKDSSASVWYSLNG---ERLGTLDGHTGTIWSIDVDCFTK-YCVTGSADYS 97 (369)
T ss_dssp EEEEEEECCSSCEEEEEECTTS-CEEEEEESSSCEEEEETTTC---CEEEEECCCSSCEEEEEECTTSS-EEEEEETTTE
T ss_pred cccEEEEEeeceEEEEEEcCCC-CEEEEEeCCCEEEEEeCCCc---hhhhhhhhcCCcEEEEEEcCCCC-EEEEEeCCCe
Confidence 4455556899999999999998 69999999999999999866 77788889999999999999988 9999999999
Q ss_pred EEEEEcCCCceeEEeeccccceEEEEEecCCCCeEEEEeCC-----CeEEEEeCCCCCc-----------eeeeccCcc-
Q 021121 131 VKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGD-----CTLRIWDVREMGS-----------TMIIPAHEF- 193 (317)
Q Consensus 131 v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~-----------~~~~~~~~~- 193 (317)
|++||+.+++.+..+. +...+.+++|+|+ +.++++++.+ |.|++||++.... ...+..+..
T Consensus 98 i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~-~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (369)
T 3zwl_B 98 IKLWDVSNGQCVATWK-SPVPVKRVEFSPC-GNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGL 175 (369)
T ss_dssp EEEEETTTCCEEEEEE-CSSCEEEEEECTT-SSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTC
T ss_pred EEEEECCCCcEEEEee-cCCCeEEEEEccC-CCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCc
Confidence 9999999999988887 8889999999998 8899999998 9999999987643 333444555
Q ss_pred -ceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccce
Q 021121 194 -EILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDAL 272 (317)
Q Consensus 194 -~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~ 272 (317)
.+.+++|+| +++++++++.||.|++||+++....+..+..|...|.+++|+|+++ +|++++.|+.|++||+++.+ .
T Consensus 176 ~~~~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~-~ 252 (369)
T 3zwl_B 176 DAATVAGWST-KGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLT-YFITSSRDTNSFLVDVSTLQ-V 252 (369)
T ss_dssp CCEEEEEECG-GGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTCC-E
T ss_pred cceeEEEEcC-CCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCC-EEEEecCCceEEEEECCCCc-e
Confidence 899999999 9999999999999999999985556888889999999999999998 79999999999999999876 4
Q ss_pred eeeeecccceeEeEEEEeccCCeEEEeecCC--------------cEEEEecCCC
Q 021121 273 VGRYDHHTEFAVGVDMSVLVEGLLASTGWDE--------------LVYVWQQGMD 313 (317)
Q Consensus 273 ~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg--------------~i~~w~~~~~ 313 (317)
...+. +...+..++|+|+ +.++++++.++ .+++|++...
T Consensus 253 ~~~~~-~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 305 (369)
T 3zwl_B 253 LKKYE-TDCPLNTAVITPL-KEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFE 305 (369)
T ss_dssp EEEEE-CSSCEEEEEECSS-SSEEEEEECCC-------------CEEEEEETTTC
T ss_pred eeeec-CCCCceeEEecCC-CceEEEeecCCCceEEEEecCCCcceeEEEecCCC
Confidence 44444 6788999999999 78999998888 8999998764
No 88
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.2e-38 Score=266.32 Aligned_cols=285 Identities=11% Similarity=0.075 Sum_probs=225.0
Q ss_pred cceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeee------------------------------
Q 021121 8 FNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAF------------------------------ 57 (317)
Q Consensus 8 ~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~------------------------------ 57 (317)
.++.+++|+| ++.+++++. ++.|++||+..+.. ...+..+
T Consensus 5 ~p~~~v~~s~--dg~~l~~~~-------~~~i~v~d~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (450)
T 2vdu_B 5 HPLQNLLTSR--DGSLVFAII-------KNCILSFKYQSPNH-WEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENK 74 (450)
T ss_dssp CCCCEEEECS--SSSEEEEEE-------TTEEEEEEEETTTE-EEEEEEEECCC--------------------------
T ss_pred ccEEEEEecC--CCCEEEEEe-------CCeEEEEECCCCCc-ceeeeecCCccccccccccccchhhcccccccccccc
Confidence 5688999999 456776665 67999999876651 0011110
Q ss_pred -------------------------cCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeC--CCCCCCCceeec--cCCcc
Q 021121 58 -------------------------DTADGVYDLAWSESHDSLLIAAVADGSVKIYDTA--LPPTANPIRSLH--EHTRE 108 (317)
Q Consensus 58 -------------------------~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~--~~~~~~~~~~~~--~~~~~ 108 (317)
.|...|.+++|+|++..++++|+.||.|++||+. .+ ..+..+. .|...
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~---~~~~~~~~~~~~~~ 151 (450)
T 2vdu_B 75 KLKSNKGDSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSK---NVLKLRKRFCFSKR 151 (450)
T ss_dssp -------------------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSS---SCEEEEEEEECSSC
T ss_pred ccccCcCccccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCC---ceeeeeecccCCCC
Confidence 2334699999999985335899999999999998 44 5555554 56789
Q ss_pred eEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeE----EeeccccceEEEEEecC--CCCeEEEEeCCCeEEEEeCCCC
Q 021121 109 VHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVR----TFKEHAYCVYNATWNPR--HSDVFCSASGDCTLRIWDVREM 182 (317)
Q Consensus 109 v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~----~~~~~~~~v~~~~~~~~--~~~~l~~~~~dg~i~i~d~~~~ 182 (317)
|.+++|+|++. +|++++.+|.|++|++.+++... .+.+|...|.+++|+|+ ++.+|++++.|+.|++||++++
T Consensus 152 v~~~~~sp~~~-~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~ 230 (450)
T 2vdu_B 152 PNAISIAEDDT-TVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQC 230 (450)
T ss_dssp EEEEEECTTSS-EEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCT
T ss_pred ceEEEEcCCCC-EEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCC
Confidence 99999999998 99999999999999998876554 67789999999999997 3568999999999999999998
Q ss_pred Cceee-eccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEe-------------------------cCC
Q 021121 183 GSTMI-IPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLN-------------------------GHG 236 (317)
Q Consensus 183 ~~~~~-~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-------------------------~~~ 236 (317)
+.+.. +.+|...|.+++|+ ++++|++++.|+.|++||+++++. +..+. ...
T Consensus 231 ~~~~~~~~~h~~~v~~~~~s--d~~~l~s~~~d~~v~vwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (450)
T 2vdu_B 231 FIVDKWLFGHKHFVSSICCG--KDYLLLSAGGDDKIFAWDWKTGKN-LSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIE 307 (450)
T ss_dssp TCEEEECCCCSSCEEEEEEC--STTEEEEEESSSEEEEEETTTCCE-EEEEECHHHHGGGCCTTSBC----------CBC
T ss_pred ceeeeeecCCCCceEEEEEC--CCCEEEEEeCCCeEEEEECCCCcE-eeeecchhhhhhhhhhcccccccccccccccce
Confidence 88777 55899999999999 889999999999999999998764 45544 223
Q ss_pred CceeEEEecCCCCeeEEeee-cCCeEEEEec--cccc--ceeeeeecccceeEeEEEEeccCCeEEEeec-------CCc
Q 021121 237 YAVRKVKFSPHRRNLLASCS-YDMTVCLWDF--MVED--ALVGRYDHHTEFAVGVDMSVLVEGLLASTGW-------DEL 304 (317)
Q Consensus 237 ~~v~~~~~~~~~~~~l~~~~-~d~~i~vwd~--~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~-------dg~ 304 (317)
..|.+++|+|+++ +|++++ .++.|++|++ .++. ..+..+..| ..|.+++|+|+ .++++.+. +..
T Consensus 308 ~~v~~i~~~~~~~-~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~--~~~v~~~~~~~~~~~~~~ 383 (450)
T 2vdu_B 308 FAVSKIIKSKNLP-FVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHND--EFQVTLDNKESSGVQKNF 383 (450)
T ss_dssp CCEEEEEECSSSS-EEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETT--EEEEEECCTTCCSSCCCS
T ss_pred EEEEEEEEeCCCC-EEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCC--cEEEEEecccCCCCCCcc
Confidence 5789999999998 577777 8999999999 4431 345666777 78999999994 35555432 566
Q ss_pred EEEEecCCC
Q 021121 305 VYVWQQGMD 313 (317)
Q Consensus 305 i~~w~~~~~ 313 (317)
|.+|.+..+
T Consensus 384 i~v~~~~~~ 392 (450)
T 2vdu_B 384 AKFIEYNLN 392 (450)
T ss_dssp EEEEEEETT
T ss_pred eEEEEEEcC
Confidence 899988654
No 89
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.2e-37 Score=255.89 Aligned_cols=249 Identities=20% Similarity=0.291 Sum_probs=213.5
Q ss_pred ecCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCC--CCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEE
Q 021121 57 FDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTA--NPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLW 134 (317)
Q Consensus 57 ~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iw 134 (317)
.+|.+.|++++|+|+++.+|++|+.|++|++||+...+.. .+...+.+|...|.+++|+|++. +|++++.|+.|++|
T Consensus 35 ~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~-~l~s~~~d~~i~~~ 113 (340)
T 4aow_A 35 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQ-FALSGSWDGTLRLW 113 (340)
T ss_dssp CCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSEEEEE
T ss_pred CCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCC-EEEEEcccccceEE
Confidence 3799999999999986679999999999999999865322 34556789999999999999998 99999999999999
Q ss_pred EcCCCceeEEeeccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCce-eeeccCccceEEEEecCCC-CcEEEEEe
Q 021121 135 TVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGST-MIIPAHEFEILACDWNKYD-DCLIASAS 212 (317)
Q Consensus 135 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~~v~~i~~~~~~-~~~l~~~~ 212 (317)
+............+...+....++++ +..+++++.|+.+++||+...... .....|...+..++|++.. ..++++++
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~ 192 (340)
T 4aow_A 114 DLTTGTTTRRFVGHTKDVLSVAFSSD-NRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCG 192 (340)
T ss_dssp ETTTTEEEEEEECCSSCEEEEEECTT-SSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEE
T ss_pred eecccceeeeecCCCCceeEEEEeec-CccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEc
Confidence 99999888888888889999999998 889999999999999998765433 3445788899999998732 45788999
Q ss_pred cCCcEEEEEccCCCccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEEecc
Q 021121 213 VDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLV 292 (317)
Q Consensus 213 ~d~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~ 292 (317)
.|+.|++||+++.+ ....+.+|...|++++|+|+++ +|++|+.|+.|++||+++.+ .+..+.. ...|..++|+|+
T Consensus 193 ~d~~i~i~d~~~~~-~~~~~~~h~~~v~~~~~s~~~~-~l~s~s~Dg~i~iwd~~~~~-~~~~~~~-~~~v~~~~~~~~- 267 (340)
T 4aow_A 193 WDKLVKVWNLANCK-LKTNHIGHTGYLNTVTVSPDGS-LCASGGKDGQAMLWDLNEGK-HLYTLDG-GDIINALCFSPN- 267 (340)
T ss_dssp TTSCEEEEETTTTE-EEEEECCCSSCEEEEEECTTSS-EEEEEETTCEEEEEETTTTE-EEEEEEC-SSCEEEEEECSS-
T ss_pred CCCEEEEEECCCCc-eeeEecCCCCcEEEEEECCCCC-EEEEEeCCCeEEEEEeccCc-eeeeecC-CceEEeeecCCC-
Confidence 99999999999866 4778889999999999999998 79999999999999999876 4445554 457999999996
Q ss_pred CCeEEEeecCCcEEEEecCCC
Q 021121 293 EGLLASTGWDELVYVWQQGMD 313 (317)
Q Consensus 293 ~~~l~s~~~dg~i~~w~~~~~ 313 (317)
..+++++.|+.|++||+...
T Consensus 268 -~~~~~~~~d~~i~iwd~~~~ 287 (340)
T 4aow_A 268 -RYWLCAATGPSIKIWDLEGK 287 (340)
T ss_dssp -SSEEEEEETTEEEEEETTTT
T ss_pred -CceeeccCCCEEEEEECCCC
Confidence 46677778999999998753
No 90
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=4.5e-38 Score=266.63 Aligned_cols=259 Identities=18% Similarity=0.357 Sum_probs=215.0
Q ss_pred eecCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCC-------CCcceeeeeecCCCCeeEEEecCCCCCeE
Q 021121 4 FKTPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPA-------APALTELVAFDTADGVYDLAWSESHDSLL 76 (317)
Q Consensus 4 ~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~-------~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 76 (317)
+.|...|.+++|+|+ ++.++++++. +|.|++|++... ...........|...|.+++|+|++..+|
T Consensus 125 ~~h~~~v~~l~~~p~-~~~~lat~~~------dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l 197 (430)
T 2xyi_A 125 INHEGEVNRARYMPQ-NACVIATKTP------SSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYL 197 (430)
T ss_dssp EEESSCCSEEEEETT-EEEEEEEECS------SSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEE
T ss_pred EcCCCcEEEEEECCC-CCcEEEEECC------CCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeE
Confidence 458889999999994 2556666665 899999999762 10111223337888999999999986699
Q ss_pred EEEEcCCeEEEEEeCCCCCC----CCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCC---ceeEEeeccc
Q 021121 77 IAAVADGSVKIYDTALPPTA----NPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRP---TSVRTFKEHA 149 (317)
Q Consensus 77 ~~~~~dg~i~v~~~~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~---~~~~~~~~~~ 149 (317)
++|+.||.|++|++...... .....+..|...|.+++|+|++..+|++++.||.|++||++++ +.+..+..|.
T Consensus 198 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 277 (430)
T 2xyi_A 198 LSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHT 277 (430)
T ss_dssp EEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCS
T ss_pred EEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCC
Confidence 99999999999999864221 1245667899999999999966669999999999999999987 5777888899
Q ss_pred cceEEEEEecCCCCeEEEEeCCCeEEEEeCCC-CCceeeeccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCC--
Q 021121 150 YCVYNATWNPRHSDVFCSASGDCTLRIWDVRE-MGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYR-- 226 (317)
Q Consensus 150 ~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~-- 226 (317)
..|++++|+|++..++++|+.||.|++||+++ ..++..+..|...|.+++|+|....+|++++.|+.|++||++...
T Consensus 278 ~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~ 357 (430)
T 2xyi_A 278 AEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEE 357 (430)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCC
T ss_pred CCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccc
Confidence 99999999999666899999999999999998 466788888999999999999444689999999999999998732
Q ss_pred -----------ccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccc
Q 021121 227 -----------VPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVE 269 (317)
Q Consensus 227 -----------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~ 269 (317)
..+..+.+|...|++++|+|+++.+|++++.||.|++|++...
T Consensus 358 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 358 QSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp CCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred cCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 3466677899999999999999867999999999999998764
No 91
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.7e-38 Score=265.27 Aligned_cols=263 Identities=18% Similarity=0.215 Sum_probs=213.8
Q ss_pred eEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEe----CCCCCC---CCceeecc------
Q 021121 38 RVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDT----ALPPTA---NPIRSLHE------ 104 (317)
Q Consensus 38 ~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~----~~~~~~---~~~~~~~~------ 104 (317)
.+.+|+++.. ...+....|...|++++|+|++..+|++|+.||.|++|++ ..+... .....+..
T Consensus 26 ~~~~~~~~~~---~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (425)
T 1r5m_A 26 IDSSDDLDGF---VKILKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSA 102 (425)
T ss_dssp --------CC---CEECEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC-
T ss_pred ccccccchhh---hhheeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccc
Confidence 4567776544 3445555677899999999998449999999999999999 655210 02222222
Q ss_pred ----CCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeeccccceEEEEEecCCCCeEEEEeCCCeEEEEeCC
Q 021121 105 ----HTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVR 180 (317)
Q Consensus 105 ----~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 180 (317)
|...|.+++|+|++. +|++++.||.|++|| .+++.+..+..|...|.+++|+|+ ++++++++.||.|++||++
T Consensus 103 ~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iwd~~ 179 (425)
T 1r5m_A 103 SSGKTTNQVTCLAWSHDGN-SIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKD-GTHIISMDVENVTILWNVI 179 (425)
T ss_dssp -----CBCEEEEEECTTSS-EEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTT-SSEEEEEETTCCEEEEETT
T ss_pred cccCCCCceEEEEEcCCCC-EEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCC-CCEEEEEecCCeEEEEECC
Confidence 678999999999988 999999999999999 677888889999999999999998 8899999999999999997
Q ss_pred CCCcee--------------------------------------------------------eeccCccceEEEEecCCC
Q 021121 181 EMGSTM--------------------------------------------------------IIPAHEFEILACDWNKYD 204 (317)
Q Consensus 181 ~~~~~~--------------------------------------------------------~~~~~~~~v~~i~~~~~~ 204 (317)
+++.+. .+..|...+.+++|+| +
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~-~ 258 (425)
T 1r5m_A 180 SGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFND-T 258 (425)
T ss_dssp TTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEET-T
T ss_pred CCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECC-C
Confidence 654332 2335677899999999 8
Q ss_pred CcEEEEEecCCcEEEEEccCCCccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeecccceeE
Q 021121 205 DCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAV 284 (317)
Q Consensus 205 ~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~ 284 (317)
+++|++++.|+.|++||+++.+ ....+..|...|.+++|+|++ ++++++.|+.|++||+++++ .+..+..|...|.
T Consensus 259 ~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~i~~~~~~~~~--~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~i~ 334 (425)
T 1r5m_A 259 NKLLLSASDDGTLRIWHGGNGN-SQNCFYGHSQSIVSASWVGDD--KVISCSMDGSVRLWSLKQNT-LLALSIVDGVPIF 334 (425)
T ss_dssp TTEEEEEETTSCEEEECSSSBS-CSEEECCCSSCEEEEEEETTT--EEEEEETTSEEEEEETTTTE-EEEEEECTTCCEE
T ss_pred CCEEEEEcCCCEEEEEECCCCc-cceEecCCCccEEEEEECCCC--EEEEEeCCCcEEEEECCCCc-EeEecccCCccEE
Confidence 9999999999999999999865 467778899999999999998 69999999999999998876 6677888999999
Q ss_pred eEEEEeccCCeEEEeecCCcEEEEecCC
Q 021121 285 GVDMSVLVEGLLASTGWDELVYVWQQGM 312 (317)
Q Consensus 285 ~~~~~~~~~~~l~s~~~dg~i~~w~~~~ 312 (317)
+++|+|+ +.+|++++.||.|++|++..
T Consensus 335 ~~~~s~~-~~~l~~~~~dg~i~i~~~~~ 361 (425)
T 1r5m_A 335 AGRISQD-GQKYAVAFMDGQVNVYDLKK 361 (425)
T ss_dssp EEEECTT-SSEEEEEETTSCEEEEECHH
T ss_pred EEEEcCC-CCEEEEEECCCeEEEEECCC
Confidence 9999998 88999999999999999864
No 92
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=3.3e-38 Score=287.82 Aligned_cols=248 Identities=17% Similarity=0.334 Sum_probs=224.5
Q ss_pred ecCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEc
Q 021121 57 FDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTV 136 (317)
Q Consensus 57 ~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~ 136 (317)
..|.+.|.+++|+|++ .+|++|+.+|.|++||+.++ .....+..|..+|.+++|+|+++ +|++++.||.|++||+
T Consensus 10 ~~h~~~v~~i~~sp~~-~~la~~~~~g~v~iwd~~~~---~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~vw~~ 84 (814)
T 3mkq_A 10 SNRSDRVKGIDFHPTE-PWVLTTLYSGRVEIWNYETQ---VEVRSIQVTETPVRAGKFIARKN-WIIVGSDDFRIRVFNY 84 (814)
T ss_dssp EEECSCEEEEEECSSS-SEEEEEETTSEEEEEETTTT---EEEEEEECCSSCEEEEEEEGGGT-EEEEEETTSEEEEEET
T ss_pred ecCCCceEEEEECCCC-CEEEEEeCCCEEEEEECCCC---ceEEEEecCCCcEEEEEEeCCCC-EEEEEeCCCeEEEEEC
Confidence 3788999999999998 69999999999999999766 67778889999999999999998 9999999999999999
Q ss_pred CCCceeEEeeccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCC-CceeeeccCccceEEEEecCCCCcEEEEEecCC
Q 021121 137 DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREM-GSTMIIPAHEFEILACDWNKYDDCLIASASVDK 215 (317)
Q Consensus 137 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~ 215 (317)
.+++.+..+..|...|.+++|+|+ +..+++++.||.|++||++++ .....+..|...+.+++|+|.+++.+++++.||
T Consensus 85 ~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg 163 (814)
T 3mkq_A 85 NTGEKVVDFEAHPDYIRSIAVHPT-KPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDR 163 (814)
T ss_dssp TTCCEEEEEECCSSCEEEEEECSS-SSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTS
T ss_pred CCCcEEEEEecCCCCEEEEEEeCC-CCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCC
Confidence 999999999999999999999999 889999999999999999987 566777889999999999996788999999999
Q ss_pred cEEEEEccCCCccEEEEecCCCceeEEEecC--CCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEEeccC
Q 021121 216 SIKIWDVRNYRVPIAVLNGHGYAVRKVKFSP--HRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVE 293 (317)
Q Consensus 216 ~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 293 (317)
.|++||+++..........+...+.+++|+| +++ +|++++.||.|++||+.+++ ....+.+|...|.+++|+|+ +
T Consensus 164 ~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~~-~~~~~~~~~~~v~~~~~~~~-~ 240 (814)
T 3mkq_A 164 TVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKP-YMITASDDLTIKIWDYQTKS-CVATLEGHMSNVSFAVFHPT-L 240 (814)
T ss_dssp EEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCC-EEEEECTTSEEEEEETTTTE-EEEEEECCSSCEEEEEECSS-S
T ss_pred eEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCC-EEEEEeCCCEEEEEECCCCc-EEEEEcCCCCCEEEEEEcCC-C
Confidence 9999999887654444445558999999999 887 79999999999999998876 56788889999999999998 7
Q ss_pred CeEEEeecCCcEEEEecCCC
Q 021121 294 GLLASTGWDELVYVWQQGMD 313 (317)
Q Consensus 294 ~~l~s~~~dg~i~~w~~~~~ 313 (317)
.+|++++.||.|++||+...
T Consensus 241 ~~l~~~~~dg~v~vwd~~~~ 260 (814)
T 3mkq_A 241 PIIISGSEDGTLKIWNSSTY 260 (814)
T ss_dssp SEEEEEETTSCEEEEETTTC
T ss_pred CEEEEEeCCCeEEEEECCCC
Confidence 89999999999999999764
No 93
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.9e-38 Score=261.33 Aligned_cols=249 Identities=18% Similarity=0.272 Sum_probs=207.3
Q ss_pred cCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceee-eeecCCCCeeEEEecCC--CCCeEEEEEcC
Q 021121 6 TPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTEL-VAFDTADGVYDLAWSES--HDSLLIAAVAD 82 (317)
Q Consensus 6 ~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~--~~~~l~~~~~d 82 (317)
|...|++++|+| ++.++++++. ||.|++|++.... .... ....|...|++++|+|+ + .+|++|+.|
T Consensus 10 h~~~v~~~~~s~--~~~~l~~~~~------dg~i~iw~~~~~~--~~~~~~~~~h~~~v~~~~~~~~~~~-~~l~s~~~d 78 (379)
T 3jrp_A 10 HNELIHDAVLDY--YGKRLATCSS------DKTIKIFEVEGET--HKLIDTLTGHEGPVWRVDWAHPKFG-TILASCSYD 78 (379)
T ss_dssp CCCCEEEEEECS--SSSEEEEEET------TSCEEEEEEETTE--EEEEEEECCCSSCEEEEEECCGGGC-SEEEEEETT
T ss_pred CcccEEEEEEcC--CCCEEEEEEC------CCcEEEEecCCCc--ceeeeEecCCCCcEEEEEeCCCCCC-CEEEEeccC
Confidence 889999999999 5666666665 9999999997543 2222 22368899999999976 5 699999999
Q ss_pred CeEEEEEeCCCCCCCCceeeccCCcceEEEEEecC--CCCEEEEEcCCCEEEEEEcCCCc--eeEEeeccccceEEEEEe
Q 021121 83 GSVKIYDTALPPTANPIRSLHEHTREVHSADYNPT--RRDSFITSSWDDTVKLWTVDRPT--SVRTFKEHAYCVYNATWN 158 (317)
Q Consensus 83 g~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~l~~~~~dg~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~ 158 (317)
|.|++||+..+ .......+..|...|.+++|+|+ +. ++++++.||.|++||++++. ....+..|...|.+++|+
T Consensus 79 g~v~iwd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~ 156 (379)
T 3jrp_A 79 GKVLIWKEENG-RWSQIAVHAVHSASVNSVQWAPHEYGP-LLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWA 156 (379)
T ss_dssp SCEEEEEEETT-EEEEEEEECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEEC
T ss_pred CEEEEEEcCCC-ceeEeeeecCCCcceEEEEeCCCCCCC-EEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEc
Confidence 99999999865 12256677789999999999999 76 99999999999999998873 344567889999999999
Q ss_pred cC------------CCCeEEEEeCCCeEEEEeCCCCCc----eeeeccCccceEEEEecCCC---CcEEEEEecCCcEEE
Q 021121 159 PR------------HSDVFCSASGDCTLRIWDVREMGS----TMIIPAHEFEILACDWNKYD---DCLIASASVDKSIKI 219 (317)
Q Consensus 159 ~~------------~~~~l~~~~~dg~i~i~d~~~~~~----~~~~~~~~~~v~~i~~~~~~---~~~l~~~~~d~~i~v 219 (317)
|. ++.++++++.||.|++||+++++. ...+..|...|.+++|+| + +++|++++.||.|++
T Consensus 157 ~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp-~~~~~~~l~s~~~dg~i~i 235 (379)
T 3jrp_A 157 PATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSP-TVLLRSYLASVSQDRTCII 235 (379)
T ss_dssp CCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECC-CCSSSEEEEEEETTSCEEE
T ss_pred CccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECC-CCCCCCeEEEEeCCCEEEE
Confidence 94 389999999999999999987753 346678999999999999 7 899999999999999
Q ss_pred EEccCCCccE--EE--EecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccc
Q 021121 220 WDVRNYRVPI--AV--LNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVE 269 (317)
Q Consensus 220 ~d~~~~~~~~--~~--~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~ 269 (317)
||++....+. .. ...|...|++++|+|+++ +|++++.||.|++|++...
T Consensus 236 wd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 236 WTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN-VLALSGGDNKVTLWKENLE 288 (379)
T ss_dssp EEESSTTSCCEEEESSSSCCSSCEEEEEECSSSC-CEEEEESSSSEEEEEEEET
T ss_pred EeCCCCCccceeeeeccccCCCcEEEEEEcCCCC-EEEEecCCCcEEEEeCCCC
Confidence 9999864322 22 234788999999999999 6999999999999999854
No 94
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=8.8e-39 Score=272.34 Aligned_cols=250 Identities=18% Similarity=0.345 Sum_probs=204.1
Q ss_pred cCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCC--------CCCceeeccCC------------cceEEEEEecC
Q 021121 58 DTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPT--------ANPIRSLHEHT------------REVHSADYNPT 117 (317)
Q Consensus 58 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~--------~~~~~~~~~~~------------~~v~~~~~~~~ 117 (317)
.+.+.|++++|+|++ .+|++|+.||.|++|++..... .+....+.+|. ..|.+++|+|+
T Consensus 26 ~~~~~V~~v~~s~~g-~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~ 104 (447)
T 3dw8_B 26 AEADIISTVEFNHSG-ELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQ 104 (447)
T ss_dssp CGGGSEEEEEECSSS-SEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCC
T ss_pred cccCcEEEEEECCCC-CEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCC
Confidence 467889999999998 6999999999999999986521 11356778898 88999999999
Q ss_pred CC-CEEEEEcCCCEEEEEEcCCCcee---------------------------------------EE-eeccccceEEEE
Q 021121 118 RR-DSFITSSWDDTVKLWTVDRPTSV---------------------------------------RT-FKEHAYCVYNAT 156 (317)
Q Consensus 118 ~~-~~l~~~~~dg~v~iwd~~~~~~~---------------------------------------~~-~~~~~~~v~~~~ 156 (317)
+. ..+++++.|+.|++||+.+++.. .. ..+|...|.+++
T Consensus 105 ~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 184 (447)
T 3dw8_B 105 KNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSIS 184 (447)
T ss_dssp CSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEE
T ss_pred CCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEE
Confidence 73 38999999999999999764331 12 357899999999
Q ss_pred EecCCCCeEEEEeCCCeEEEEeCCCC-Ccee-------eeccCccceEEEEecCCCC-cEEEEEecCCcEEEEEccCCCc
Q 021121 157 WNPRHSDVFCSASGDCTLRIWDVREM-GSTM-------IIPAHEFEILACDWNKYDD-CLIASASVDKSIKIWDVRNYRV 227 (317)
Q Consensus 157 ~~~~~~~~l~~~~~dg~i~i~d~~~~-~~~~-------~~~~~~~~v~~i~~~~~~~-~~l~~~~~d~~i~v~d~~~~~~ 227 (317)
|+|+ +++|+++ .|+.|++||+++. +... .+..|...|.+++|+| ++ ++|++++.|+.|++||+++.+.
T Consensus 185 ~~~~-~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~~l~s~~~dg~i~iwd~~~~~~ 261 (447)
T 3dw8_B 185 INSD-YETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHP-NSCNTFVYSSSKGTIRLCDMRASAL 261 (447)
T ss_dssp ECTT-SSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECS-SCTTEEEEEETTSCEEEEETTTCSS
T ss_pred EcCC-CCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECC-CCCcEEEEEeCCCeEEEEECcCCcc
Confidence 9998 8899998 7999999999843 3333 2557889999999999 76 9999999999999999998663
Q ss_pred ---cEEEEecCCC------------ceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeecccce----------
Q 021121 228 ---PIAVLNGHGY------------AVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEF---------- 282 (317)
Q Consensus 228 ---~~~~~~~~~~------------~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~---------- 282 (317)
....+..|.. .|.+++|+|+++ +|++++. +.|++||+++....+..+..|...
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~ 339 (447)
T 3dw8_B 262 CDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGR-YMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYEN 339 (447)
T ss_dssp SCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSS-EEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHT
T ss_pred ccceeeEeccCCCccccccccccCceEEEEEECCCCC-EEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccc
Confidence 1567777775 899999999998 6888888 999999999744466777777642
Q ss_pred -----eEeEEEEeccCCeEEEeecCCcEEEEecCCCC
Q 021121 283 -----AVGVDMSVLVEGLLASTGWDELVYVWQQGMDP 314 (317)
Q Consensus 283 -----v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~ 314 (317)
+..++|+|+ +.+|++++.||.|++||+....
T Consensus 340 ~~i~~~~~~~~s~~-~~~l~s~s~dg~v~iwd~~~~~ 375 (447)
T 3dw8_B 340 DCIFDKFECCWNGS-DSVVMTGSYNNFFRMFDRNTKR 375 (447)
T ss_dssp SGGGCCCCEEECTT-SSEEEEECSTTEEEEEETTTCC
T ss_pred cccccceEEEECCC-CCEEEEeccCCEEEEEEcCCCc
Confidence 234999999 7899999999999999997653
No 95
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.3e-37 Score=259.94 Aligned_cols=245 Identities=14% Similarity=0.201 Sum_probs=201.1
Q ss_pred ecCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceee--ccCCcceEEEEEecCCCCEEEEEcCCCEEEEE
Q 021121 57 FDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSL--HEHTREVHSADYNPTRRDSFITSSWDDTVKLW 134 (317)
Q Consensus 57 ~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iw 134 (317)
..|...|++++|+|+++.+|++|+.||.|++||+... .....+ .+|...|.+++|+|++..+|++++.|+.|++|
T Consensus 70 ~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw 146 (383)
T 3ei3_B 70 SPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQ---NKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLR 146 (383)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTST---TCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEE
T ss_pred cCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCc---ccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEE
Confidence 3688999999999998569999999999999999865 344443 36999999999999433399999999999999
Q ss_pred EcCCCceeEEeecc---ccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeeccCccceEEEEecCCCCc-EEEE
Q 021121 135 TVDRPTSVRTFKEH---AYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDC-LIAS 210 (317)
Q Consensus 135 d~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~-~l~~ 210 (317)
|+++ .....+..+ ...|.+++|+|+ +.++++++.|+.|++||+ +++.+..+..|...|.+++|+| +++ ++++
T Consensus 147 d~~~-~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~-~~~~~l~s 222 (383)
T 3ei3_B 147 DFSG-SVIQVFAKTDSWDYWYCCVDVSVS-RQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNP-RCDWLMAT 222 (383)
T ss_dssp ETTS-CEEEEEECCCCSSCCEEEEEEETT-TTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECS-SCTTEEEE
T ss_pred ECCC-CceEEEeccCCCCCCeEEEEECCC-CCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECC-CCCCEEEE
Confidence 9985 555555443 478999999998 889999999999999999 5678888889999999999999 777 9999
Q ss_pred EecCCcEEEEEccCCC---ccEEEEecCCCceeEEEecC-CCCeeEEeeecCCeEEEEecccccceeeeeeccc------
Q 021121 211 ASVDKSIKIWDVRNYR---VPIAVLNGHGYAVRKVKFSP-HRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHT------ 280 (317)
Q Consensus 211 ~~~d~~i~v~d~~~~~---~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~------ 280 (317)
++.|+.|++||+++.+ ..+..+ +|...|++++|+| ++. +|++++.|+.|++||+++.+.. ..+..|.
T Consensus 223 ~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~-~l~~~~~d~~i~iwd~~~~~~~-~~~~~~~~~~~~~ 299 (383)
T 3ei3_B 223 SSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDST-KLLTTDQRNEIRVYSSYDWSKP-DQIIIHPHRQFQH 299 (383)
T ss_dssp EETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSC-EEEEEESSSEEEEEETTBTTSC-SEEEECCBCCCTT
T ss_pred EeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCC-EEEEEcCCCcEEEEECCCCccc-ccccccccccccc
Confidence 9999999999999733 223444 6999999999999 888 7999999999999999987633 3444332
Q ss_pred -----------ceeEeEEEEeccCCeEEEeecCCcEEEEecCCCC
Q 021121 281 -----------EFAVGVDMSVLVEGLLASTGWDELVYVWQQGMDP 314 (317)
Q Consensus 281 -----------~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~ 314 (317)
..+..++|+|+ +.+ +++.||.|++||+....
T Consensus 300 ~~~~~~~~~p~~~~~~~~~s~d-g~~--s~s~d~~i~iwd~~~~~ 341 (383)
T 3ei3_B 300 LTPIKATWHPMYDLIVAGRYPD-DQL--LLNDKRTIDIYDANSGG 341 (383)
T ss_dssp SCCCCCEECSSSSEEEEECBCC-TTT--CTTCCCCEEEEETTTCC
T ss_pred ccceEEeccCCCCceEEEecCC-ccc--ccCCCCeEEEEecCCCc
Confidence 23444666776 444 77899999999997653
No 96
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.7e-38 Score=263.35 Aligned_cols=248 Identities=19% Similarity=0.337 Sum_probs=212.6
Q ss_pred cCCCCeeEEEecCC---CCCeEEEEEcCCeEEEEEeCCCCCCCCceeec-----cCCcceEEEEEecC----CCCEEEEE
Q 021121 58 DTADGVYDLAWSES---HDSLLIAAVADGSVKIYDTALPPTANPIRSLH-----EHTREVHSADYNPT----RRDSFITS 125 (317)
Q Consensus 58 ~~~~~v~~~~~~~~---~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~----~~~~l~~~ 125 (317)
+|...|++++|+|+ +...+++++.++.|++|++..+ ..+..+. .|...|.+++|+|+ +. +|++|
T Consensus 16 ~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~l~~~ 91 (366)
T 3k26_A 16 DHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQ---GEIRLLQSYVDADADENFYTCAWTYDSNTSHP-LLAVA 91 (366)
T ss_dssp TTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGG---GCEEEEEEEECSCTTCCEEEEEEEECTTTCCE-EEEEE
T ss_pred CCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCC---cEEEeeeeccccCCCCcEEEEEeccCCCCCCC-EEEEe
Confidence 68999999999984 4467777888889999999865 3333333 26688999999999 44 89999
Q ss_pred cCCCEEEEEEcCCCceeEEeeccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeee---ccCccceEEEEecC
Q 021121 126 SWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMII---PAHEFEILACDWNK 202 (317)
Q Consensus 126 ~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~---~~~~~~v~~i~~~~ 202 (317)
+.||.|++||+.+++.+..+..|...|.+++|+|+++.++++++.||.|++||+++++.+..+ ..|...|.+++|+|
T Consensus 92 ~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 171 (366)
T 3k26_A 92 GSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDL 171 (366)
T ss_dssp ETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECT
T ss_pred cCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECC
Confidence 999999999999999999999999999999999944899999999999999999999888887 67999999999999
Q ss_pred CCCcEEEEEecCCcEEEEEccCCCcc---------------------------EEEEecCCCceeEEEecCCCCeeEEee
Q 021121 203 YDDCLIASASVDKSIKIWDVRNYRVP---------------------------IAVLNGHGYAVRKVKFSPHRRNLLASC 255 (317)
Q Consensus 203 ~~~~~l~~~~~d~~i~v~d~~~~~~~---------------------------~~~~~~~~~~v~~~~~~~~~~~~l~~~ 255 (317)
++++|++++.|+.|++||+++.+.. ......|...|.+++|+ ++ +|+++
T Consensus 172 -~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~-~l~~~ 247 (366)
T 3k26_A 172 -LGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GD-LILSK 247 (366)
T ss_dssp -TSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TT-EEEEE
T ss_pred -CCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CC-EEEEE
Confidence 9999999999999999999864321 22333489999999998 55 79999
Q ss_pred ecCCeEEEEecccccc-------------eeeeeecccceeEeEEEEecc-CCeEEEeecCCcEEEEecCCC
Q 021121 256 SYDMTVCLWDFMVEDA-------------LVGRYDHHTEFAVGVDMSVLV-EGLLASTGWDELVYVWQQGMD 313 (317)
Q Consensus 256 ~~d~~i~vwd~~~~~~-------------~~~~~~~~~~~v~~~~~~~~~-~~~l~s~~~dg~i~~w~~~~~ 313 (317)
+.|+.|++||+.+.+. .+..+..|...|.+++|+|+. +.+|++++.||.|++||+...
T Consensus 248 ~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~ 319 (366)
T 3k26_A 248 SCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVE 319 (366)
T ss_dssp CSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSS
T ss_pred ecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCC
Confidence 9999999999987642 356778889999999999973 579999999999999999874
No 97
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.3e-37 Score=261.57 Aligned_cols=261 Identities=18% Similarity=0.292 Sum_probs=209.2
Q ss_pred cCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeE
Q 021121 6 TPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSV 85 (317)
Q Consensus 6 ~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 85 (317)
+...|.+++|+| ++.++++++. +|.|++||+..... .. ....|...|.+++|++ .++++|+.||.|
T Consensus 133 ~~~~v~~v~~s~--~~~~l~~~~~------dg~i~iwd~~~~~~-~~--~~~~~~~~v~~~~~~~---~~l~~~~~dg~i 198 (401)
T 4aez_A 133 ESTYVASVKWSH--DGSFLSVGLG------NGLVDIYDVESQTK-LR--TMAGHQARVGCLSWNR---HVLSSGSRSGAI 198 (401)
T ss_dssp TTCCEEEEEECT--TSSEEEEEET------TSCEEEEETTTCCE-EE--EECCCSSCEEEEEEET---TEEEEEETTSEE
T ss_pred CCCCEEEEEECC--CCCEEEEECC------CCeEEEEECcCCeE-EE--EecCCCCceEEEEECC---CEEEEEcCCCCE
Confidence 578899999999 5666666665 99999999987652 22 2227889999999953 599999999999
Q ss_pred EEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeeccccceEEEEEecCCCCeE
Q 021121 86 KIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVF 165 (317)
Q Consensus 86 ~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 165 (317)
++||+... ......+..|...|.+++|+|++. +|++++.||.|++||+++++....+..|...|.+++|+|++..++
T Consensus 199 ~i~d~~~~--~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll 275 (401)
T 4aez_A 199 HHHDVRIA--NHQIGTLQGHSSEVCGLAWRSDGL-QLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLL 275 (401)
T ss_dssp EEEETTSS--SCEEEEEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEE
T ss_pred EEEecccC--cceeeEEcCCCCCeeEEEEcCCCC-EEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEE
Confidence 99999743 255677888999999999999987 999999999999999999999999999999999999999877888
Q ss_pred EEEe--CCCeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEEEEE--ecCCcEEEEEccCCCc-cEEEEecCCCcee
Q 021121 166 CSAS--GDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASA--SVDKSIKIWDVRNYRV-PIAVLNGHGYAVR 240 (317)
Q Consensus 166 ~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~--~~d~~i~v~d~~~~~~-~~~~~~~~~~~v~ 240 (317)
++++ .|+.|++||+++++.+..+. +...+.+++|+| ++++++++ +.|+.|++||+++.+. ....+.+|...|.
T Consensus 276 ~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~-~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~ 353 (401)
T 4aez_A 276 ATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWSP-HSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVL 353 (401)
T ss_dssp EEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEECS-SSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCC
T ss_pred EEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEECC-CCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEE
Confidence 8876 79999999999998888886 667899999999 88888884 4899999999998543 2334678999999
Q ss_pred EEEecCCCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeE
Q 021121 241 KVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGV 286 (317)
Q Consensus 241 ~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~ 286 (317)
+++|+|+++ +|++++.||.|++||+.+++.+......+......+
T Consensus 354 ~~~~s~dg~-~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~i 398 (401)
T 4aez_A 354 YSALSPDGR-ILSTAASDENLKFWRVYDGDHVKRPIPITKTPSSSI 398 (401)
T ss_dssp EEEECTTSS-EEEEECTTSEEEEEECCC------------------
T ss_pred EEEECCCCC-EEEEEeCCCcEEEEECCCCccccccccccCCCccce
Confidence 999999998 799999999999999998875443333333333333
No 98
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.7e-39 Score=276.73 Aligned_cols=250 Identities=10% Similarity=0.098 Sum_probs=198.9
Q ss_pred eecCCCCeeEEEecCCC-C-------CeEEE-------------------EEcCCeEEEEEeCCCCCCC-CceeeccCCc
Q 021121 56 AFDTADGVYDLAWSESH-D-------SLLIA-------------------AVADGSVKIYDTALPPTAN-PIRSLHEHTR 107 (317)
Q Consensus 56 ~~~~~~~v~~~~~~~~~-~-------~~l~~-------------------~~~dg~i~v~~~~~~~~~~-~~~~~~~~~~ 107 (317)
.+.+.+.|.+|+|+|++ . .+||+ ++.|++|+||++..++... ....+..|.+
T Consensus 129 ~~~~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~ 208 (524)
T 2j04_B 129 IYNVGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFG 208 (524)
T ss_dssp EEECCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCC
T ss_pred EEECCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCC
Confidence 34567889999999875 1 35655 4567899999997652111 1133566788
Q ss_pred ceEEEEEecCC-----CCEEEEEcCCCEEEEEEcCCCce-----------eEEeeccccceEEEEEecCCCCeEEEEeCC
Q 021121 108 EVHSADYNPTR-----RDSFITSSWDDTVKLWTVDRPTS-----------VRTFKEHAYCVYNATWNPRHSDVFCSASGD 171 (317)
Q Consensus 108 ~v~~~~~~~~~-----~~~l~~~~~dg~v~iwd~~~~~~-----------~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 171 (317)
.|.+++|+|++ ..+|++++.||+|++||+.++.. ...+.+|...|++++|+|+ ..|++|+.|
T Consensus 209 ~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~--~~lasgs~D 286 (524)
T 2j04_B 209 EVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP--TTVVCGFKN 286 (524)
T ss_dssp SEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS--SEEEEEETT
T ss_pred cEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC--CeEEEEeCC
Confidence 99999999972 23899999999999999987642 2467788999999999985 479999999
Q ss_pred CeEEEEeCCCCC-ceeeeccCccceEEE--EecCCCC-cEEEEEecCCcEEEEEccCCCccEEEEecCCC--ceeEEEec
Q 021121 172 CTLRIWDVREMG-STMIIPAHEFEILAC--DWNKYDD-CLIASASVDKSIKIWDVRNYRVPIAVLNGHGY--AVRKVKFS 245 (317)
Q Consensus 172 g~i~i~d~~~~~-~~~~~~~~~~~v~~i--~~~~~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~--~v~~~~~~ 245 (317)
|+|++||+++++ +...+..|...|.++ .|+| ++ ++|++++.|++|++||+++.+. ...+.+|.. .|.+++|+
T Consensus 287 gtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~-~g~~~laS~S~D~tvklWD~~~~~~-~~~~~~~~~~~~v~~v~fs 364 (524)
T 2j04_B 287 GFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSD-FEDTVVSTVAVDGYFYIFNPKDIAT-TKTTVSRFRGSNLVPVVYC 364 (524)
T ss_dssp SEEEEEETTBCSSCSEEEECSSSCEEEEEEECCT-TSCCEEEEEETTSEEEEECGGGHHH-HCEEEEECSCCSCCCEEEE
T ss_pred CEEEEEECCCCCCceEEeecccccEEEEEEEcCC-CCCeEEEEeccCCeEEEEECCCCCc-ccccccccccCcccceEeC
Confidence 999999999764 445678899999999 5677 76 8999999999999999998654 444555543 58899999
Q ss_pred CCCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEeecCCcEEEEecCC
Q 021121 246 PHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGM 312 (317)
Q Consensus 246 ~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~ 312 (317)
|+++ .+++++.|++|++||++++. ....+.+|.+.|++++|+|+ +.+|++|+.||+|++|++..
T Consensus 365 p~~~-~l~s~~~d~tv~lwd~~~~~-~~~~l~gH~~~V~sva~Sp~-g~~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 365 PQIY-SYIYSDGASSLRAVPSRAAF-AVHPLVSRETTITAIGVSRL-HPMVLAGSADGSLIITNAAR 428 (524)
T ss_dssp TTTT-EEEEECSSSEEEEEETTCTT-CCEEEEECSSCEEEEECCSS-CCBCEEEETTTEEECCBSCS
T ss_pred CCcC-eEEEeCCCCcEEEEECcccc-cceeeecCCCceEEEEeCCC-CCeEEEEECCCEEEEEechH
Confidence 9998 58999999999999999876 44567789999999999998 78999999999999999754
No 99
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-38 Score=287.27 Aligned_cols=252 Identities=23% Similarity=0.382 Sum_probs=217.5
Q ss_pred ecCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecC--CCCEEEEEcCCCEEEEE
Q 021121 57 FDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPT--RRDSFITSSWDDTVKLW 134 (317)
Q Consensus 57 ~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~l~~~~~dg~v~iw 134 (317)
.+|.+.|++++|+|++ .+|++|+.||.|++||+..+ .......+.+|..+|.+++|+|+ +. ++++|+.||.|++|
T Consensus 6 ~gH~~~V~~l~~s~dg-~~latg~~dg~I~vwd~~~~-~~~~~~~l~~h~~~V~~l~~s~~~~~~-~l~s~s~Dg~I~vw 82 (753)
T 3jro_A 6 NAHNELIHDAVLDYYG-KRLATCSSDKTIKIFEVEGE-THKLIDTLTGHEGPVWRVDWAHPKFGT-ILASCSYDGKVLIW 82 (753)
T ss_dssp --CCCCEEEECCCSSS-CCEEEEETTTEEEEEEEETT-EEEEEEEECCCSSCEEEEEECCTTSCS-EEEEEETTSCEEEE
T ss_pred ccCcceeEEEEECCCC-CeEEEEECCCcEEEEecCCC-CCccceeccCCcCceEEEEecCCCCCC-EEEEEeCCCeEEEE
Confidence 3789999999999998 59999999999999999743 33566778899999999999987 66 99999999999999
Q ss_pred EcCCCc--eeEEeeccccceEEEEEecCC-CCeEEEEeCCCeEEEEeCCCCC--ceeeeccCccceEEEEecCC------
Q 021121 135 TVDRPT--SVRTFKEHAYCVYNATWNPRH-SDVFCSASGDCTLRIWDVREMG--STMIIPAHEFEILACDWNKY------ 203 (317)
Q Consensus 135 d~~~~~--~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~v~~i~~~~~------ 203 (317)
|+.+++ ....+..|...|.+++|+|+. +.++++++.||.|++||++++. ....+..|...|.+++|+|.
T Consensus 83 d~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~ 162 (753)
T 3jro_A 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDG 162 (753)
T ss_dssp EEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC-----
T ss_pred ECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccccccc
Confidence 999886 677778899999999999974 6899999999999999998873 34556788999999999994
Q ss_pred ------CCcEEEEEecCCcEEEEEccCCC---ccEEEEecCCCceeEEEecCC---CCeeEEeeecCCeEEEEecccccc
Q 021121 204 ------DDCLIASASVDKSIKIWDVRNYR---VPIAVLNGHGYAVRKVKFSPH---RRNLLASCSYDMTVCLWDFMVEDA 271 (317)
Q Consensus 204 ------~~~~l~~~~~d~~i~v~d~~~~~---~~~~~~~~~~~~v~~~~~~~~---~~~~l~~~~~d~~i~vwd~~~~~~ 271 (317)
++.++++|+.||.|++||+++.. .+...+.+|...|++++|+|+ +. +|++++.||.|++||+.+++.
T Consensus 163 ~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~-~l~s~s~Dg~I~iwd~~~~~~ 241 (753)
T 3jro_A 163 EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRS-YLASVSQDRTCIIWTQDNEQG 241 (753)
T ss_dssp ----CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSE-EEEEEESSSCEEEEEESSSSS
T ss_pred ccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCC-EEEEEecCCEEEEecCCCCCC
Confidence 48899999999999999999865 334567789999999999999 66 799999999999999988641
Q ss_pred ----eeeeeecccceeEeEEEEeccCCeEEEeecCCcEEEEecCCC
Q 021121 272 ----LVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGMD 313 (317)
Q Consensus 272 ----~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~ 313 (317)
.......|...|++++|+|+ +.+|++++.||.|++|++...
T Consensus 242 ~~~~~~~~~~~~~~~v~~l~~spd-g~~l~s~s~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 242 PWKKTLLKEEKFPDVLWRASWSLS-GNVLALSGGDNKVTLWKENLE 286 (753)
T ss_dssp CCBCCBSSSSCCSSCCCCEEECTT-TCCEEEECSSSCEECCBCCSS
T ss_pred cceeEEeccCCCCCceEEEEEcCC-CCEEEEEcCCCEEEEEecCCC
Confidence 23344568889999999998 789999999999999999853
No 100
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=1.2e-38 Score=266.99 Aligned_cols=294 Identities=13% Similarity=0.068 Sum_probs=208.9
Q ss_pred cCcceeEEEEe---cCCCCeEEEEEecccccccCceEEEEecCCCCC------cceeeeeecCCCCeeEEEecCC-----
Q 021121 6 TPFNGYSVKFS---PFYESRLAVATAQNFGILGNGRVHVLDLSPAAP------ALTELVAFDTADGVYDLAWSES----- 71 (317)
Q Consensus 6 ~~~~v~~~~~~---p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~------~~~~~~~~~~~~~v~~~~~~~~----- 71 (317)
.+...+++.|. |. ...+++++. ++.|.+|+...... ....+....+...+..+.|++.
T Consensus 14 l~~~p~~~~w~~~~~~-~~~l~a~g~-------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (393)
T 4gq1_A 14 LNVRPYTTTWCSQSPS-CSNLLAIGH-------DTGITIYCASEEQTPGSTGLTLQELFTIQTGLPTLHLSFSSSCSYSE 85 (393)
T ss_dssp TTCCEEEEEECTTSGG-GTTEEEEEE-------SSEEEEEEEEECCSSSCCSEEEEEEEEEECSSCEEEEEECTTCEEEC
T ss_pred CCCCCeEEEEeCCCCC-CCCEEEEEC-------CCCEEEEECCCCCcccccccceeeeEEEecCCCeeeEeecCCccccc
Confidence 34566777885 43 234555554 77899998754321 1223333455556666666532
Q ss_pred --------------CCCeEEEEEcCCeEEEEEeCCCCCC--CCceeeccCCcceEEEEEec--------CCCCEEEEEcC
Q 021121 72 --------------HDSLLIAAVADGSVKIYDTALPPTA--NPIRSLHEHTREVHSADYNP--------TRRDSFITSSW 127 (317)
Q Consensus 72 --------------~~~~l~~~~~dg~i~v~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~--------~~~~~l~~~~~ 127 (317)
...+|++++.|++|++||...++.. ..+..+.+|.+.|++++|+| +++ +|++++.
T Consensus 86 ~~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~-~las~s~ 164 (393)
T 4gq1_A 86 NLHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQ-VIASVGD 164 (393)
T ss_dssp C----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEE-EEEEEET
T ss_pred cccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCC-EEEEEEC
Confidence 1247999999999999999865211 23345779999999999998 666 9999999
Q ss_pred CCEEEEEEcCCCceeEEeeccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeee-------------------
Q 021121 128 DDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMII------------------- 188 (317)
Q Consensus 128 dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~------------------- 188 (317)
|++|++||++++..+..+..|..++.+++|+|++..+|++++.||.|++||+++++.....
T Consensus 165 D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~ 244 (393)
T 4gq1_A 165 DCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPL 244 (393)
T ss_dssp TSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGG
T ss_pred CCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccc
Confidence 9999999999988888888899999999999986678999999999999999876543221
Q ss_pred ------ccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEecCCCcee-------------------EEE
Q 021121 189 ------PAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVR-------------------KVK 243 (317)
Q Consensus 189 ------~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~v~-------------------~~~ 243 (317)
.+|...+.++.|++.+++.+++++.|+.+++||+...+. ...+..|...+. .+.
T Consensus 245 ~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (393)
T 4gq1_A 245 VNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANND-YNEISDSTMKLGPKNLLPNVQGISLFPSLLGACP 323 (393)
T ss_dssp C------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC--------------------CCSCSEEEECSSCCSSCCEE
T ss_pred eeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCC-CceEeeecCccccEEEccccccccccCcceeEEE
Confidence 246667889998754999999999999999999986543 333333332222 223
Q ss_pred ecCCCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEeecCCcEEEEecCC
Q 021121 244 FSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGM 312 (317)
Q Consensus 244 ~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~ 312 (317)
+.+.+..++++|+.||.|++||+.+++. ......|..+|.+++|+|+ +++||+++.+| +.+|++..
T Consensus 324 ~~~~~~~~~~sgs~Dg~V~lwd~~~~~~-~~~~~~~~~~V~svafspd-G~~LA~as~~G-v~lvrL~g 389 (393)
T 4gq1_A 324 HPRYMDYFATAHSQHGLIQLINTYEKDS-NSIPIQLGMPIVDFCWHQD-GSHLAIATEGS-VLLTRLMG 389 (393)
T ss_dssp CSSCTTEEEEEETTTTEEEEEETTCTTC-CEEEEECSSCEEEEEECTT-SSEEEEEESSE-EEEEEEGG
T ss_pred ccCCCCEEEEEECCCCEEEEEECCCCcE-EEEecCCCCcEEEEEEcCC-CCEEEEEeCCC-eEEEEEeC
Confidence 3333444678888999999999998874 4566778889999999999 89999998776 66776643
No 101
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=2.8e-38 Score=265.76 Aligned_cols=248 Identities=19% Similarity=0.244 Sum_probs=209.5
Q ss_pred CeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCC-CCCceeeccCCcceEEEEEec-CCCCEEEEEcCCCEEEEEEcCCC
Q 021121 62 GVYDLAWSESHDSLLIAAVADGSVKIYDTALPPT-ANPIRSLHEHTREVHSADYNP-TRRDSFITSSWDDTVKLWTVDRP 139 (317)
Q Consensus 62 ~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~dg~v~iwd~~~~ 139 (317)
....++++|+...++++++.+|.|++|++..... ......+.+|.+.|.+++|+| ++. +|++|+.||.|++||+.++
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~-~l~s~s~dg~v~vw~~~~~ 114 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDN-VIASGSEDCTVMVWEIPDG 114 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTT-EEEEEETTSEEEEEECCTT
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCC-EEEEEeCCCeEEEEEccCC
Confidence 4556889988654555688899999999865322 234556788999999999999 665 9999999999999999987
Q ss_pred -------ceeEEeeccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeee--ccCccceEEEEecCCCCcEEEE
Q 021121 140 -------TSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMII--PAHEFEILACDWNKYDDCLIAS 210 (317)
Q Consensus 140 -------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~--~~~~~~v~~i~~~~~~~~~l~~ 210 (317)
+.+..+.+|...|.+++|+|++.+++++++.||.|++||+++++.+..+ ..|...|.+++|+| ++++|++
T Consensus 115 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~ 193 (402)
T 2aq5_A 115 GLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSR-DGALICT 193 (402)
T ss_dssp CCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECT-TSSCEEE
T ss_pred CCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECC-CCCEEEE
Confidence 6678888999999999999995579999999999999999999988888 78999999999999 9999999
Q ss_pred EecCCcEEEEEccCCCccEEEE-ecCCCc-eeEEEecCCCCeeEEee---ecCCeEEEEecccccceeeee-ecccceeE
Q 021121 211 ASVDKSIKIWDVRNYRVPIAVL-NGHGYA-VRKVKFSPHRRNLLASC---SYDMTVCLWDFMVEDALVGRY-DHHTEFAV 284 (317)
Q Consensus 211 ~~~d~~i~v~d~~~~~~~~~~~-~~~~~~-v~~~~~~~~~~~~l~~~---~~d~~i~vwd~~~~~~~~~~~-~~~~~~v~ 284 (317)
++.|+.|++||+++.+. +..+ ..|... +.+++|+|++. +|++| +.|+.|++||+++.+...... ..|...+.
T Consensus 194 ~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~ 271 (402)
T 2aq5_A 194 SCRDKRVRVIEPRKGTV-VAEKDRPHEGTRPVHAVFVSEGK-ILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVL 271 (402)
T ss_dssp EETTSEEEEEETTTTEE-EEEEECSSCSSSCCEEEECSTTE-EEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCE
T ss_pred EecCCcEEEEeCCCCce-eeeeccCCCCCcceEEEEcCCCc-EEEEeccCCCCceEEEEcCccccCCceEEeccCCCcee
Confidence 99999999999998764 5555 678765 89999999987 78888 789999999999876433333 35677899
Q ss_pred eEEEEeccCCeEE-EeecCCcEEEEecCCCC
Q 021121 285 GVDMSVLVEGLLA-STGWDELVYVWQQGMDP 314 (317)
Q Consensus 285 ~~~~~~~~~~~l~-s~~~dg~i~~w~~~~~~ 314 (317)
.++|+|+ +.+|+ +++.||.|++|++....
T Consensus 272 ~~~~s~~-~~~l~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 272 LPFFDPD-TNIVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp EEEEETT-TTEEEEEETTCSCEEEEEECSST
T ss_pred EEEEcCC-CCEEEEEEcCCCeEEEEEecCCC
Confidence 9999999 56665 66689999999998754
No 102
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.8e-38 Score=268.56 Aligned_cols=247 Identities=14% Similarity=0.216 Sum_probs=202.1
Q ss_pred cCCCCeeEEEecC-CCCCeEEEEEcCCeEEEEEeCC---CCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEE
Q 021121 58 DTADGVYDLAWSE-SHDSLLIAAVADGSVKIYDTAL---PPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKL 133 (317)
Q Consensus 58 ~~~~~v~~~~~~~-~~~~~l~~~~~dg~i~v~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~i 133 (317)
.|.+.|++++|+| ++ .+|++|+.||.|++||+.. +........+ .|...|.+++|+|++. +|++++.||.|++
T Consensus 61 ~h~~~V~~~~~s~~~~-~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~-~l~s~s~dg~i~v 137 (437)
T 3gre_A 61 NEPNSITSSAVSPGET-PYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFD-AFAVSSKDGQIIV 137 (437)
T ss_dssp TTTSCEEEEEEECSSS-CEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSS-EEEEEETTSEEEE
T ss_pred CCCCceEEEEECCCCC-CEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCC-EEEEEeCCCEEEE
Confidence 6789999999999 77 6999999999999999876 3212223333 5899999999999887 9999999999999
Q ss_pred EEcC---CCceeEEeec------------cccceEEEE--EecCCCCeEEEEeCCCeEEEEeCCCCCceeeecc--Cccc
Q 021121 134 WTVD---RPTSVRTFKE------------HAYCVYNAT--WNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPA--HEFE 194 (317)
Q Consensus 134 wd~~---~~~~~~~~~~------------~~~~v~~~~--~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~ 194 (317)
||++ +++....+.. +...+.++. ++++ +.++++++.||.|++||+++++.+..+.. |...
T Consensus 138 wd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~ 216 (437)
T 3gre_A 138 LKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEE-KSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGA 216 (437)
T ss_dssp EEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSS-CEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCC
T ss_pred EEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCC-CCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCc
Confidence 9995 5555544432 334455555 4466 78999999999999999999999998887 8899
Q ss_pred eEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEe-cCCCceeEEEecC----CCCeeEEeeecCCeEEEEecccc
Q 021121 195 ILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLN-GHGYAVRKVKFSP----HRRNLLASCSYDMTVCLWDFMVE 269 (317)
Q Consensus 195 v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-~~~~~v~~~~~~~----~~~~~l~~~~~d~~i~vwd~~~~ 269 (317)
|.+++|+| ++++|++|+.||.|++||+++.+ ++..+. .|..+|++++|+| ++. +|++++.||.|++||++++
T Consensus 217 v~~~~~s~-~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~v~~~~~~~~~s~~~~-~l~s~~~dg~i~iwd~~~~ 293 (437)
T 3gre_A 217 VSSICIDE-ECCVLILGTTRGIIDIWDIRFNV-LIRSWSFGDHAPITHVEVCQFYGKNSV-IVVGGSSKTFLTIWNFVKG 293 (437)
T ss_dssp EEEEEECT-TSCEEEEEETTSCEEEEETTTTE-EEEEEBCTTCEEEEEEEECTTTCTTEE-EEEEESTTEEEEEEETTTT
T ss_pred eEEEEECC-CCCEEEEEcCCCeEEEEEcCCcc-EEEEEecCCCCceEEEEeccccCCCcc-EEEEEcCCCcEEEEEcCCC
Confidence 99999999 89999999999999999999855 466654 7888999996665 555 7999999999999999887
Q ss_pred cceeeeeec--------------------------ccceeEeEEEEeccCCeEEEeecCCcEEEEecCCCC
Q 021121 270 DALVGRYDH--------------------------HTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGMDP 314 (317)
Q Consensus 270 ~~~~~~~~~--------------------------~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~ 314 (317)
+. ...+.+ |...|++++|+ + +.+|++++.||.|++||+....
T Consensus 294 ~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~-~~~l~s~~~d~~i~~wd~~~~~ 361 (437)
T 3gre_A 294 HC-QYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-N-DKILLTDEATSSIVMFSLNELS 361 (437)
T ss_dssp EE-EEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-T-TEEEEEEGGGTEEEEEETTCGG
T ss_pred cE-EEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-C-ceEEEecCCCCeEEEEECCCcc
Confidence 62 233322 66778999999 5 6899999999999999998653
No 103
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2.6e-38 Score=268.52 Aligned_cols=251 Identities=15% Similarity=0.161 Sum_probs=197.5
Q ss_pred cCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcC
Q 021121 58 DTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVD 137 (317)
Q Consensus 58 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~ 137 (317)
.|...|++|+|+|.++.+||+|+.||.|+|||+..+ .......+.+|.+.|++++|+|.+..+|++++.||+|++||++
T Consensus 117 ~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~-~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~ 195 (435)
T 4e54_B 117 PFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIK-DKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFK 195 (435)
T ss_dssp ECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCC-SCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETT
T ss_pred CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCC-CceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeecc
Confidence 577889999999977689999999999999999865 2233445668999999999998544499999999999999998
Q ss_pred CCceeEEeec--cccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEecCC
Q 021121 138 RPTSVRTFKE--HAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDK 215 (317)
Q Consensus 138 ~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~ 215 (317)
++........ +...+.+++|+|+ +.+|++|+.||.|++||++. +.+..+..|...|.+++|+|....++++++.|+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~g~~dg~i~~wd~~~-~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~ 273 (435)
T 4e54_B 196 GNILRVFASSDTINIWFCSLDVSAS-SRMVVTGDNVGNVILLNMDG-KELWNLRMHKKKVTHVALNPCCDWFLATASVDQ 273 (435)
T ss_dssp SCEEEEEECCSSCSCCCCCEEEETT-TTEEEEECSSSBEEEEESSS-CBCCCSBCCSSCEEEEEECTTCSSEEEEEETTS
T ss_pred CCceeEEeccCCCCccEEEEEECCC-CCEEEEEeCCCcEeeeccCc-ceeEEEecccceEEeeeecCCCceEEEEecCcc
Confidence 7644333332 3346789999998 89999999999999999874 566778889999999999995556899999999
Q ss_pred cEEEEEccCCCcc--EEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeecccc------eeEeEE
Q 021121 216 SIKIWDVRNYRVP--IAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTE------FAVGVD 287 (317)
Q Consensus 216 ~i~v~d~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~------~v~~~~ 287 (317)
.|++||+++.+.. .....+|...|++++|+|++. +|++++.||.|++||+.+++.. ..+..|.. .+....
T Consensus 274 ~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~-~l~s~~~D~~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 351 (435)
T 4e54_B 274 TVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGA-RLLTTDQKSEIRVYSASQWDCP-LGLIPHPHRHFQHLTPIKAA 351 (435)
T ss_dssp BCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSS-EEEEEESSSCEEEEESSSSSSE-EEECCCCCCCCSSSCCCBCE
T ss_pred eeeEEecccccccceEEEeeeccccccceeECCCCC-eeEEEcCCCEEEEEECCCCccc-eEEecccccccccceeEEEE
Confidence 9999999876532 233457999999999999998 7999999999999999987633 33333321 233456
Q ss_pred EEeccCCeEEEee------------cCCcEEEEecCCCC
Q 021121 288 MSVLVEGLLASTG------------WDELVYVWQQGMDP 314 (317)
Q Consensus 288 ~~~~~~~~l~s~~------------~dg~i~~w~~~~~~ 314 (317)
|+|+ +.++++++ .++.|++||...++
T Consensus 352 ~~~~-~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~ 389 (435)
T 4e54_B 352 WHPR-YNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGK 389 (435)
T ss_dssp ECSS-SSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCC
T ss_pred EcCC-CCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCc
Confidence 6665 44444443 34689999987653
No 104
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=8.6e-38 Score=257.01 Aligned_cols=246 Identities=15% Similarity=0.147 Sum_probs=210.8
Q ss_pred cCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEc-
Q 021121 58 DTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTV- 136 (317)
Q Consensus 58 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~- 136 (317)
.|.+.|++++|+|++ .+|++++.||.|++|++..............|...|.+++|+|++..++++++.||.|++||+
T Consensus 9 ~h~~~v~~~~~s~~~-~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~ 87 (342)
T 1yfq_A 9 APKDYISDIKIIPSK-SLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLI 87 (342)
T ss_dssp CCSSCEEEEEEEGGG-TEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSS
T ss_pred CCCCcEEEEEEcCCC-CEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEec
Confidence 688899999999998 699999999999999998763222355566899999999999986327899999999999999
Q ss_pred CCCceeEEeec--cccceEEEEEecCCCCeEEEEeCCCeEEEEeCCC---------CCceeeeccCccceEEEEecCCCC
Q 021121 137 DRPTSVRTFKE--HAYCVYNATWNPRHSDVFCSASGDCTLRIWDVRE---------MGSTMIIPAHEFEILACDWNKYDD 205 (317)
Q Consensus 137 ~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~---------~~~~~~~~~~~~~v~~i~~~~~~~ 205 (317)
++++. ..+.. |...|.+++|+| +.++++++.|+.|++||+++ ++.+..+. +...+.+++|+| ++
T Consensus 88 ~~~~~-~~~~~~~~~~~v~~l~~~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~-~~ 162 (342)
T 1yfq_A 88 GSPSF-QALTNNEANLGICRICKYG--DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNS-SR 162 (342)
T ss_dssp SSSSE-EECBSCCCCSCEEEEEEET--TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECS-SE
T ss_pred cCCce-EeccccCCCCceEEEEeCC--CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecC-Cc
Confidence 77654 67778 999999999999 78899999999999999988 77676666 888999999998 55
Q ss_pred cEEEEEecCCcEEEEEccC-CCcc-EEEEecCCCceeEEEecC-CCCeeEEeeecCCeEEEEecccc-----cceeeeee
Q 021121 206 CLIASASVDKSIKIWDVRN-YRVP-IAVLNGHGYAVRKVKFSP-HRRNLLASCSYDMTVCLWDFMVE-----DALVGRYD 277 (317)
Q Consensus 206 ~~l~~~~~d~~i~v~d~~~-~~~~-~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~d~~i~vwd~~~~-----~~~~~~~~ 277 (317)
+++++.|+.|++||+++ .... ......|...+.+++|+| +++ ++++++.||.|++|+++.. ......+.
T Consensus 163 --l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~-~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~ 239 (342)
T 1yfq_A 163 --LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQE-GYACSSIDGRVAVEFFDDQGDDYNSSKRFAFR 239 (342)
T ss_dssp --EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGC-EEEEEETTSEEEEEECCTTCCSTTCTTCEEEE
T ss_pred --EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCC-EEEEEecCCcEEEEEEcCCCcccccccceeee
Confidence 89999999999999998 5532 344556888999999999 988 7999999999999999876 24556777
Q ss_pred cccc---------eeEeEEEEeccCCeEEEeecCCcEEEEecCCC
Q 021121 278 HHTE---------FAVGVDMSVLVEGLLASTGWDELVYVWQQGMD 313 (317)
Q Consensus 278 ~~~~---------~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~ 313 (317)
.|.. .|.+++|+|+ +.+|++++.||.|++||+...
T Consensus 240 ~~~~~~~~~~~~~~i~~~~~s~~-~~~l~~~~~dg~i~vwd~~~~ 283 (342)
T 1yfq_A 240 CHRLNLKDTNLAYPVNSIEFSPR-HKFLYTAGSDGIISCWNLQTR 283 (342)
T ss_dssp CCCCCTTCCSSCCCEEEEEECTT-TCCEEEEETTSCEEEEETTTT
T ss_pred cccccccccccceeEEEEEEcCC-CCEEEEecCCceEEEEcCccH
Confidence 7755 9999999998 789999999999999999864
No 105
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=6.3e-37 Score=253.05 Aligned_cols=276 Identities=11% Similarity=0.152 Sum_probs=211.4
Q ss_pred cCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeE
Q 021121 6 TPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSV 85 (317)
Q Consensus 6 ~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 85 (317)
|...|.+++|+| ++.+++++. +..+++|++++.. ......+ ..+..+++.++++.++++++.|+.|
T Consensus 18 h~~~V~~v~fs~--dg~~la~g~-------~~~~~iw~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~v 83 (355)
T 3vu4_A 18 VSNPVTDYEFNQ--DQSCLILST-------LKSFEIYNVHPVA----HIMSQEM-RHLSKVRMLHRTNYVAFVTGVKEVV 83 (355)
T ss_dssp -CCCCCEEEECT--TSSEEEEEC-------SSEEEEEEETTEE----EEEEEEC-SCCCEEEECTTSSEEEEECSSTTEE
T ss_pred CCCceEEEEECC--CCCEEEEEc-------CCEEEEEecCCcc----eeeeeec-CCeEEEEEcCCCCEEEEEECCccEE
Confidence 778999999999 677777776 3468899987543 2222222 3588888988875455678888999
Q ss_pred EEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCC-ceeEEeeccccceEEEEEecCCCCe
Q 021121 86 KIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRP-TSVRTFKEHAYCVYNATWNPRHSDV 164 (317)
Q Consensus 86 ~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~ 164 (317)
++||+.++ +.+..+. +...|.+++|+++ .++++. |+.|++||+.++ +.+..+.. +...+++++ .+
T Consensus 84 ~iWd~~~~---~~~~~~~-~~~~v~~v~~~~~---~~~~~~-~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~---~~ 149 (355)
T 3vu4_A 84 HIWDDVKK---QDVSRIK-VDAPVKDLFLSRE---FIVVSY-GDVISVFKFGNPWKRITDDIR---FGGVCEFSN---GL 149 (355)
T ss_dssp EEEETTTT---EEEEEEE-CSSCEEEEEECSS---EEEEEE-TTEEEEEESSTTCCBSSCCEE---EEEEEEEET---TE
T ss_pred EEEECCCC---cEEEEEE-CCCceEEEEEcCC---EEEEEE-cCEEEEEECCCCceeeEEecc---CCceEEEEc---cE
Confidence 99998866 5565555 6779999999876 344443 789999999988 66666654 444556666 45
Q ss_pred EEE--EeCCCeEEEEeCCCCC----------------ceeeeccCccceEEEEecCCCCcEEEEEecCCc-EEEEEccCC
Q 021121 165 FCS--ASGDCTLRIWDVREMG----------------STMIIPAHEFEILACDWNKYDDCLIASASVDKS-IKIWDVRNY 225 (317)
Q Consensus 165 l~~--~~~dg~i~i~d~~~~~----------------~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~-i~v~d~~~~ 225 (317)
++. |+.+|.|++||+++++ ....+.+|..+|.+++|+| ++++|++++.|++ |++||++++
T Consensus 150 la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~-~g~~l~s~s~d~~~v~iwd~~~~ 228 (355)
T 3vu4_A 150 LVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNR-KSDMVATCSQDGTIIRVFKTEDG 228 (355)
T ss_dssp EEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECT-TSSEEEEEETTCSEEEEEETTTC
T ss_pred EEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECC-CCCEEEEEeCCCCEEEEEECCCC
Confidence 555 6899999999999765 2677889999999999999 9999999999998 999999987
Q ss_pred CccEEEEe-c-CCCceeEEEecCCCCeeEEeeecCCeEEEEeccccccee-eee---------------------ecccc
Q 021121 226 RVPIAVLN-G-HGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALV-GRY---------------------DHHTE 281 (317)
Q Consensus 226 ~~~~~~~~-~-~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~-~~~---------------------~~~~~ 281 (317)
+. +..+. + |...|++++|+|+++ +|++++.|++|++||++...... ..+ ..+..
T Consensus 229 ~~-~~~~~~g~h~~~v~~~~~s~~~~-~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (355)
T 3vu4_A 229 VL-VREFRRGLDRADVVDMKWSTDGS-KLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHV 306 (355)
T ss_dssp CE-EEEEECTTCCSCEEEEEECTTSC-EEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTC
T ss_pred cE-EEEEEcCCCCCcEEEEEECCCCC-EEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCC
Confidence 64 66666 5 999999999999998 79999999999999997653110 010 01122
Q ss_pred eeEeEEEEeccCCeEEEeecCCcEEEEecCCC
Q 021121 282 FAVGVDMSVLVEGLLASTGWDELVYVWQQGMD 313 (317)
Q Consensus 282 ~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~ 313 (317)
....++|+++ ++.|++++.||.+++|++...
T Consensus 307 ~~~~~a~~~d-~~~l~~~~~dg~~~~~~~~~~ 337 (355)
T 3vu4_A 307 RGCKIAWISE-SSLVVVWPHTRMIETFKVVFD 337 (355)
T ss_dssp CCCEEEESSS-SEEEEEETTTTEEEEEEEEEE
T ss_pred CceEEEEeCC-CCEEEEEeCCCeEEEEEEEcC
Confidence 3467899998 789999999999999998654
No 106
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-36 Score=246.81 Aligned_cols=239 Identities=20% Similarity=0.271 Sum_probs=210.0
Q ss_pred ecCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEc
Q 021121 57 FDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTV 136 (317)
Q Consensus 57 ~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~ 136 (317)
..|.+.|++++| |++ .+|++|+.||.|++||+... .....+..|...|.+++|+|++. ++++++.||.|++|++
T Consensus 15 ~~h~~~v~~~~~-~~~-~~l~s~~~dg~v~vw~~~~~---~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~~~ 88 (313)
T 3odt_A 15 KGHDQDVRDVVA-VDD-SKVASVSRDGTVRLWSKDDQ---WLGTVVYTGQGFLNSVCYDSEKE-LLLFGGKDTMINGVPL 88 (313)
T ss_dssp CCCSSCEEEEEE-EET-TEEEEEETTSEEEEEEESSS---EEEEEEEECSSCEEEEEEETTTT-EEEEEETTSCEEEEET
T ss_pred hCCCCCcEEEEe-cCC-CEEEEEEcCCcEEEEECCCC---EEEEEeecCCccEEEEEECCCCC-EEEEecCCCeEEEEEe
Confidence 378999999999 887 58999999999999999765 66677788999999999999988 9999999999999998
Q ss_pred CCC---ceeEEeeccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEec
Q 021121 137 DRP---TSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASV 213 (317)
Q Consensus 137 ~~~---~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~ 213 (317)
... +....+..|...|.++.|. ++++++++.||.|++|| .++....+..|...+.++.+.|.+++++++++.
T Consensus 89 ~~~~~~~~~~~~~~~~~~i~~~~~~---~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 163 (313)
T 3odt_A 89 FATSGEDPLYTLIGHQGNVCSLSFQ---DGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASA 163 (313)
T ss_dssp TCCTTSCC-CEECCCSSCEEEEEEE---TTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEET
T ss_pred eecCCCCcccchhhcccCEEEEEec---CCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEEC
Confidence 765 5567788899999999994 67899999999999999 567777888899999999998878899999999
Q ss_pred CCcEEEEEccCCCccEEEEec-CCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEEecc
Q 021121 214 DKSIKIWDVRNYRVPIAVLNG-HGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLV 292 (317)
Q Consensus 214 d~~i~v~d~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~ 292 (317)
|+.|++||.. .....+.. |...+.+++|+|++. +++++.||.|++||+++++ .+..+..|...|++++|+|+
T Consensus 164 d~~i~i~d~~---~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~i~~~~~~~~- 236 (313)
T 3odt_A 164 DKTIKLWQND---KVIKTFSGIHNDVVRHLAVVDDGH--FISCSNDGLIKLVDMHTGD-VLRTYEGHESFVYCIKLLPN- 236 (313)
T ss_dssp TSCEEEEETT---EEEEEECSSCSSCEEEEEEEETTE--EEEEETTSEEEEEETTTCC-EEEEEECCSSCEEEEEECTT-
T ss_pred CCCEEEEecC---ceEEEEeccCcccEEEEEEcCCCe--EEEccCCCeEEEEECCchh-hhhhhhcCCceEEEEEEecC-
Confidence 9999999943 23556665 899999999999986 8889999999999999876 66788899999999999998
Q ss_pred CCeEEEeecCCcEEEEecCCCC
Q 021121 293 EGLLASTGWDELVYVWQQGMDP 314 (317)
Q Consensus 293 ~~~l~s~~~dg~i~~w~~~~~~ 314 (317)
+ .|++++.||.|++||+....
T Consensus 237 ~-~l~~~~~dg~v~iwd~~~~~ 257 (313)
T 3odt_A 237 G-DIVSCGEDRTVRIWSKENGS 257 (313)
T ss_dssp S-CEEEEETTSEEEEECTTTCC
T ss_pred C-CEEEEecCCEEEEEECCCCc
Confidence 4 69999999999999997653
No 107
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.9e-38 Score=263.53 Aligned_cols=263 Identities=10% Similarity=0.039 Sum_probs=210.4
Q ss_pred ecCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCe
Q 021121 5 KTPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGS 84 (317)
Q Consensus 5 ~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 84 (317)
+....|.+++|+| +++++++++. |++|+ |..... .+ .+|...|.+++|+|+| .++.
T Consensus 13 ~~~~~v~sv~~Sp--DG~~iASas~------D~TV~--d~~~~~----~l--~gh~~~v~~V~FsPdg--------~~~~ 68 (588)
T 2j04_A 13 EFEDWKNNLTWAR--DGTLYLTTFP------DISIG--QPKYAK----DI--NCNSKNLFHVKEFPLE--------FENK 68 (588)
T ss_dssp CCSSSSCCEEECT--TSCEEEECSS------SEEEE--EECCCS----CC--SSBGGGTEEEEEECCC--------CCCT
T ss_pred HhhccEEEEEECC--CCCEEEEEcC------Cceee--cccccc----ee--cCCCccEEEEEECCCC--------Ccce
Confidence 4567899999999 7888888886 99999 633322 22 3789999999999987 4555
Q ss_pred EEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeecccc-----ceEEEEEec
Q 021121 85 VKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAY-----CVYNATWNP 159 (317)
Q Consensus 85 i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~-----~v~~~~~~~ 159 (317)
+.+|+.+. .....+ .|...|.+++|+|+|. .|++++.||.|++||.++ ++..+. |.. .+.+++|+|
T Consensus 69 ~~~~~~~~----~~~~~~-~~~~~V~~vawSPdG~-~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSP 139 (588)
T 2j04_A 69 LDFELAQQ----NGLLNS-QPVCYPRVCKPSPIDD-WMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNP 139 (588)
T ss_dssp TTTSCCCS----SCSSTT-SCSCCEEEEEECSSSS-CEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECS
T ss_pred EEEEeCCC----ceEeec-CCCCcEEEEEECCCCC-EEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcC
Confidence 55555321 122222 4578999999999998 999999999999999654 555666 554 499999999
Q ss_pred CCCCeEEEEeCCCeEEEEeCCCCCc-------eeee----ccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCc-
Q 021121 160 RHSDVFCSASGDCTLRIWDVREMGS-------TMII----PAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRV- 227 (317)
Q Consensus 160 ~~~~~l~~~~~dg~i~i~d~~~~~~-------~~~~----~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~- 227 (317)
+ +++|++|+.||+|++||+++++. +..+ .+|...|.+++|+| ++ +++++.|+.|++||+.....
T Consensus 140 D-G~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSP-dg--Laass~D~tVrlWd~~~~~~~ 215 (588)
T 2j04_A 140 I-ESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYE-DV--LVAALSNNSVFSMTVSASSHQ 215 (588)
T ss_dssp S-SSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEET-TE--EEEEETTCCEEEECCCSSSSC
T ss_pred C-CCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcC-Cc--EEEEeCCCeEEEEECCCCccc
Confidence 9 99999999999999999998753 4555 56778999999999 77 88888999999999987663
Q ss_pred -cEEEE-ecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEE--EeccCCeEEEeecCC
Q 021121 228 -PIAVL-NGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDM--SVLVEGLLASTGWDE 303 (317)
Q Consensus 228 -~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~l~s~~~dg 303 (317)
....+ .+|...|.+++|+ +. .|++++ ++.|++||+.+++.... ..+|...+.+++| +|+ +..|++++.||
T Consensus 216 ~~~~tL~~~h~~~V~svaFs--g~-~LASa~-~~tIkLWd~~~~~~~~~-~~gh~~~V~~va~~~s~d-~~~La~a~edG 289 (588)
T 2j04_A 216 PVSRMIQNASRRKITDLKIV--DY-KVVLTC-PGYVHKIDLKNYSISSL-KTGSLENFHIIPLNHEKE-STILLMSNKTS 289 (588)
T ss_dssp CCEEEEECCCSSCCCCEEEE--TT-EEEEEC-SSEEEEEETTTTEEEEE-ECSCCSCCCEEEETTCSS-CEEEEECSSCE
T ss_pred cceeeecccccCcEEEEEEE--CC-EEEEEe-CCeEEEEECCCCeEEEE-EcCCCceEEEEEeeeCCC-CCEEEEEcCCC
Confidence 23455 4788899999999 45 688887 69999999998763233 3379999999999 998 78999999999
Q ss_pred cEEEEecC
Q 021121 304 LVYVWQQG 311 (317)
Q Consensus 304 ~i~~w~~~ 311 (317)
. ++|..+
T Consensus 290 ~-klw~~d 296 (588)
T 2j04_A 290 Y-KVLLED 296 (588)
T ss_dssp E-EEEESS
T ss_pred C-EEEeec
Confidence 9 999974
No 108
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.9e-37 Score=253.33 Aligned_cols=265 Identities=9% Similarity=0.082 Sum_probs=203.2
Q ss_pred CCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCC------
Q 021121 20 ESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALP------ 93 (317)
Q Consensus 20 ~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~------ 93 (317)
++.++++++. ||.|++||+..... ...+. ...|.++.|+|+ +++++.|+.|++|+....
T Consensus 47 d~~~l~sg~~------Dg~v~iwd~~~~~~-~~~~~----~~~v~~~~~~~~----~~s~s~D~~i~~w~~~~~~~~~~~ 111 (343)
T 3lrv_A 47 DKWVCMCRCE------DGALHFTQLKDSKT-ITTIT----TPNPRTGGEHPA----IISRGPCNRLLLLYPGNQITILDS 111 (343)
T ss_dssp EEEEEEEEEE------TTEEEEEEESSSSC-EEEEE----EECCCTTCCCCS----EEEECSTTEEEEEETTTEEEEEET
T ss_pred CCCEEEEECC------CCcEEEEECCCCcE-EEEEe----cCCceeeeeCCc----eEEecCCCeEEEEEccCceEEeec
Confidence 4666676665 99999999987653 22222 356888889986 999999999999986532
Q ss_pred CCCCCceee-ccCCcceEEEEEec--CCCCEEEEEcCCCEEEEEEcCCCceeEEee-ccccceEEEEEecCCCCeEEEEe
Q 021121 94 PTANPIRSL-HEHTREVHSADYNP--TRRDSFITSSWDDTVKLWTVDRPTSVRTFK-EHAYCVYNATWNPRHSDVFCSAS 169 (317)
Q Consensus 94 ~~~~~~~~~-~~~~~~v~~~~~~~--~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~ 169 (317)
...+.+... ..|..+|.+++|+| ++. ++++++.||.|++||+++++...... .+...+.+++|+|+ +.++++|+
T Consensus 112 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pd-g~~lasg~ 189 (343)
T 3lrv_A 112 KTNKVLREIEVDSANEIIYMYGHNEVNTE-YFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKD-SLLLALYS 189 (343)
T ss_dssp TTCCEEEEEECCCSSCEEEEECCC---CC-EEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTT-SCEEEEEC
T ss_pred CCcceeEEeecCCCCCEEEEEcCCCCCCC-EEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCC-CCEEEEEc
Confidence 111223333 36778999999999 887 99999999999999999998876663 34557999999998 89999999
Q ss_pred CCCeEEEEeCCCCCce-eeecc-CccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEe---cCCCcee--EE
Q 021121 170 GDCTLRIWDVREMGST-MIIPA-HEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLN---GHGYAVR--KV 242 (317)
Q Consensus 170 ~dg~i~i~d~~~~~~~-~~~~~-~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~---~~~~~v~--~~ 242 (317)
.||.|++||+++++.. ..+.. |..+|.+++|+| ++.+|++++ ++.|++||+++.+. ...+. .|...+. ++
T Consensus 190 ~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~-~g~~l~s~~-~~~v~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~ 266 (343)
T 3lrv_A 190 PDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFAD-NGYWMVVEC-DQTVVCFDLRKDVG-TLAYPTYTIPEFKTGTVTY 266 (343)
T ss_dssp TTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECT-TSSEEEEEE-SSBEEEEETTSSTT-CBSSCCCBC-----CCEEE
T ss_pred CCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeC-CCCEEEEEe-CCeEEEEEcCCCCc-ceeecccccccccccceEE
Confidence 9999999999999887 77777 999999999999 999999999 55999999998764 22222 2434444 69
Q ss_pred EecCCCCeeEEeeec-CCeEEEEecccccceeeeeecccceeEeEEEEe---ccCCeEEEeecCCcEEEEecC
Q 021121 243 KFSPHRRNLLASCSY-DMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSV---LVEGLLASTGWDELVYVWQQG 311 (317)
Q Consensus 243 ~~~~~~~~~l~~~~~-d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~l~s~~~dg~i~~w~~~ 311 (317)
+|+|+++ +|++++. |+.+++|++......... .++..++|.+ + ...+++++.||.+.++-..
T Consensus 267 ~~~~~g~-~l~~~s~~d~~i~v~~~~~~~~~~~~-----~~~~~~~~~~~~~~-~~~l~~~~~d~~~~~~~~~ 332 (343)
T 3lrv_A 267 DIDDSGK-NMIAYSNESNSLTIYKFDKKTKNWTK-----DEESALCLQSDTAD-FTDMDVVCGDGGIAAILKT 332 (343)
T ss_dssp EECTTSS-EEEEEETTTTEEEEEEECTTTCSEEE-----EEEEECCC----CC-CCEEEEEEETTEEEEEEEC
T ss_pred EECCCCC-EEEEecCCCCcEEEEEEcccccceEe-----cCceeEecCccccc-cceeEEEecCCceEEEEec
Confidence 9999999 6888887 999999999766533222 5677888887 5 5688888888888887544
No 109
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.4e-36 Score=251.74 Aligned_cols=250 Identities=14% Similarity=0.132 Sum_probs=191.9
Q ss_pred cCcceeEEEEecCCCCeEEEEEecc----cccccCceEEEEecCCCCCcceeeeee------cCCCCeeEEEecCCCCCe
Q 021121 6 TPFNGYSVKFSPFYESRLAVATAQN----FGILGNGRVHVLDLSPAAPALTELVAF------DTADGVYDLAWSESHDSL 75 (317)
Q Consensus 6 ~~~~v~~~~~~p~~~~~~~~~~~~~----~~~~~~g~i~i~~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~ 75 (317)
+...|.++++++ ..++++.... .....++.+++|++............. .+...+.+++|+|||. +
T Consensus 72 ~~~~v~s~~~~~---~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~-~ 147 (365)
T 4h5i_A 72 NDDSPTAIDASK---GIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGT-V 147 (365)
T ss_dssp TSCCCCEEEEET---TEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSS-C
T ss_pred CCCceEEEEeCC---CEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCC-E
Confidence 345677777665 4444443321 112247889999998765433333222 2344588999999984 6
Q ss_pred EEEE--EcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEE--eeccccc
Q 021121 76 LIAA--VADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRT--FKEHAYC 151 (317)
Q Consensus 76 l~~~--~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~--~~~~~~~ 151 (317)
++++ +.|++|++||+.+. +.+..+. |...|.+++|+|+++ ++++++. +.+.+|+..+++.+.. ...|...
T Consensus 148 la~as~~~d~~i~iwd~~~~---~~~~~~~-~~~~V~~v~fspdg~-~l~s~s~-~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (365)
T 4h5i_A 148 AAIASSKVPAIMRIIDPSDL---TEKFEIE-TRGEVKDLHFSTDGK-VVAYITG-SSLEVISTVTGSCIARKTDFDKNWS 221 (365)
T ss_dssp EEEEESCSSCEEEEEETTTT---EEEEEEE-CSSCCCEEEECTTSS-EEEEECS-SCEEEEETTTCCEEEEECCCCTTEE
T ss_pred EEEEECCCCCEEEEeECCCC---cEEEEeC-CCCceEEEEEccCCc-eEEeccc-eeEEEEEeccCcceeeeecCCCCCC
Confidence 6544 46899999999865 5555554 778899999999998 8888885 4566777777765543 3467889
Q ss_pred eEEEEEecCCCCeEEEEeCCC----eEEEEeCCCCCc----eeeeccCccceEEEEecCCCCcEEEEEecCCcEEEEEcc
Q 021121 152 VYNATWNPRHSDVFCSASGDC----TLRIWDVREMGS----TMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVR 223 (317)
Q Consensus 152 v~~~~~~~~~~~~l~~~~~dg----~i~i~d~~~~~~----~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~ 223 (317)
+.+++|+|+ +..+++++.|+ .+++||+..... ...+..|..+|++++|+| ++++||+|+.|+.|++||++
T Consensus 222 v~~v~fspd-g~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Sp-dg~~lasgs~D~~V~iwd~~ 299 (365)
T 4h5i_A 222 LSKINFIAD-DTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDM-KGELAVLASNDNSIALVKLK 299 (365)
T ss_dssp EEEEEEEET-TEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECT-TSCEEEEEETTSCEEEEETT
T ss_pred EEEEEEcCC-CCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECC-CCCceEEEcCCCEEEEEECC
Confidence 999999999 88888888877 688999876643 345667889999999999 99999999999999999999
Q ss_pred CCCccEEE-EecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccc
Q 021121 224 NYRVPIAV-LNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVE 269 (317)
Q Consensus 224 ~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~ 269 (317)
+++. +.. +.+|..+|++++|+|+++ +|++|+.|++|+|||+...
T Consensus 300 ~~~~-~~~~~~gH~~~V~~v~fSpdg~-~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 300 DLSM-SKIFKQAHSFAITEVTISPDST-YVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp TTEE-EEEETTSSSSCEEEEEECTTSC-EEEEEETTSEEEEEECCTT
T ss_pred CCcE-EEEecCcccCCEEEEEECCCCC-EEEEEeCCCeEEEEEcCCC
Confidence 8764 554 578999999999999999 7999999999999999654
No 110
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=7.7e-36 Score=250.97 Aligned_cols=286 Identities=17% Similarity=0.213 Sum_probs=199.4
Q ss_pred cCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCC--CeEEEEEcCC
Q 021121 6 TPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHD--SLLIAAVADG 83 (317)
Q Consensus 6 ~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~l~~~~~dg 83 (317)
+...|.+++|+|+....++++ +. ||.|++||+.... ....+.+...+.++.|+|.+. .++++++.+|
T Consensus 98 ~~~~v~~~~~~~~~~~~l~s~-~~------d~~i~iwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (408)
T 4a11_B 98 HRYSVETVQWYPHDTGMFTSS-SF------DKTLKVWDTNTLQ----TADVFNFEETVYSHHMSPVSTKHCLVAVGTRGP 166 (408)
T ss_dssp CSSCEEEEEECTTCTTCEEEE-ET------TSEEEEEETTTTE----EEEEEECSSCEEEEEECSSCSSCCEEEEEESSS
T ss_pred CCCcEEEEEEccCCCcEEEEE-eC------CCeEEEeeCCCCc----cceeccCCCceeeeEeecCCCCCcEEEEEcCCC
Confidence 788999999999634455544 43 8999999998754 344456788899999998642 4899999999
Q ss_pred eEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCc-eeEEe---------------ec
Q 021121 84 SVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPT-SVRTF---------------KE 147 (317)
Q Consensus 84 ~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~-~~~~~---------------~~ 147 (317)
.|++||+..+ .....+..|...|.+++|+|++..++++++.||.|++||++++. ....+ ..
T Consensus 167 ~v~~~d~~~~---~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (408)
T 4a11_B 167 KVQLCDLKSG---SCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTA 243 (408)
T ss_dssp SEEEEESSSS---CCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCS
T ss_pred eEEEEeCCCc---ceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeecccccc
Confidence 9999999866 67778889999999999999998679999999999999998765 33333 46
Q ss_pred cccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeeccCcc----ceEEEEecCCCCcEEEEEecCCcEEEEEcc
Q 021121 148 HAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEF----EILACDWNKYDDCLIASASVDKSIKIWDVR 223 (317)
Q Consensus 148 ~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~----~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~ 223 (317)
|...|.+++|+|+ ++++++++.||.|++||+++++.......+.. ......+.......+++++.++.|++||+.
T Consensus 244 ~~~~v~~~~~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~ 322 (408)
T 4a11_B 244 HNGKVNGLCFTSD-GLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVY 322 (408)
T ss_dssp CSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETT
T ss_pred ccCceeEEEEcCC-CCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECc
Confidence 8889999999998 89999999999999999998876554432211 111122222245567777889999999999
Q ss_pred CCCccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEeecCC
Q 021121 224 NYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDE 303 (317)
Q Consensus 224 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg 303 (317)
+.+ ++..+.+|...|++++|+|+++ +|++++.||.|++||+.+.+.+ .....+. ....+.+.....+.+.+.++
T Consensus 323 ~~~-~~~~~~~~~~~v~~~~~s~~~~-~l~s~~~dg~i~iw~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 396 (408)
T 4a11_B 323 SGE-QITMLKGHYKTVDCCVFQSNFQ-ELYSGSRDCNILAWVPSLYEPV-PDDDETT---TKSQLNPAFEDAWSSSDEEG 396 (408)
T ss_dssp TCC-EEEEECCCSSCEEEEEEETTTT-EEEEEETTSCEEEEEECC-----------------------------------
T ss_pred CCc-ceeeeccCCCeEEEEEEcCCCC-EEEEECCCCeEEEEeCCCCCcc-CCCCceE---eccccccccceeecccCccC
Confidence 876 4888899999999999999998 7999999999999999987643 2222222 22344554355677788899
Q ss_pred cEEEEecCC
Q 021121 304 LVYVWQQGM 312 (317)
Q Consensus 304 ~i~~w~~~~ 312 (317)
.+++|+...
T Consensus 397 ~~~~W~~~~ 405 (408)
T 4a11_B 397 GTSAWSHPQ 405 (408)
T ss_dssp ---------
T ss_pred ceeecCCcc
Confidence 999998754
No 111
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=2.6e-35 Score=249.03 Aligned_cols=257 Identities=21% Similarity=0.354 Sum_probs=207.1
Q ss_pred cCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeE
Q 021121 6 TPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSV 85 (317)
Q Consensus 6 ~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 85 (317)
+...|++|+|+| ++.++++++. ||.|++||+..... ......|...+.+++|++ .+|++|+.|+.+
T Consensus 146 ~~~~V~sv~fsp--dg~~lasgs~------Dg~v~iWd~~~~~~---~~~~~~h~~~v~~~s~~~---~~l~sgs~d~~i 211 (420)
T 4gga_A 146 PGEYISSVAWIK--EGNYLAVGTS------SAEVQLWDVQQQKR---LRNMTSHSARVGSLSWNS---YILSSGSRSGHI 211 (420)
T ss_dssp TTCCEEEEEECT--TSSEEEEEET------TSCEEEEETTTTEE---EEEECCCSSCEEEEEEET---TEEEEEETTSEE
T ss_pred CCCcEEEEEECC--CCCEEEEEEC------CCeEEEEEcCCCcE---EEEEeCCCCceEEEeeCC---CEEEEEeCCCce
Confidence 566799999999 6777777765 99999999987642 222336888899988863 589999999999
Q ss_pred EEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCc----eeEEeeccccceEEEEEecCC
Q 021121 86 KIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPT----SVRTFKEHAYCVYNATWNPRH 161 (317)
Q Consensus 86 ~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~----~~~~~~~~~~~v~~~~~~~~~ 161 (317)
++||.... ...+..+.+|...+..+.|+|++. ++++++.|+.+++|+..+++ .+.....|...|.+++|+|.+
T Consensus 212 ~~~d~~~~--~~~~~~~~~h~~~~~~~~~~~~g~-~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~ 288 (420)
T 4gga_A 212 HHHDVRVA--EHHVATLSGHSQEVCGLRWAPDGR-HLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQ 288 (420)
T ss_dssp EEEETTSS--SCEEEEEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTC
T ss_pred eEeeeccc--ceeeEEecccccceeeeeecCCCC-eeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCc
Confidence 99998753 345667889999999999999998 99999999999999998764 355667789999999999997
Q ss_pred CCeEEEE--eCCCeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEe--cCCcEEEEEccCCCccEEEEecCCC
Q 021121 162 SDVFCSA--SGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASAS--VDKSIKIWDVRNYRVPIAVLNGHGY 237 (317)
Q Consensus 162 ~~~l~~~--~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~--~d~~i~v~d~~~~~~~~~~~~~~~~ 237 (317)
..+++++ +.|+.|++||+++++....+..+ ..+.++.|+| +++.+++++ .|+.|++||+++++ ++..+.+|..
T Consensus 289 ~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~-~~v~~~~~~~-~~~~lv~~sg~~d~~I~iwd~~~~~-~v~~l~gH~~ 365 (420)
T 4gga_A 289 SNVLATGGGTSDRHIRIWNVCSGACLSAVDAH-SQVCSILWSP-HYKELISGHGFAQNQLVIWKYPTMA-KVAELKGHTS 365 (420)
T ss_dssp TTEEEEEECTTTCEEEEEETTTTEEEEEEECS-SCEEEEEEET-TTTEEEEEECTTTCCEEEEETTTCC-EEEEECCCSS
T ss_pred ccEEEEEeecCCCEEEEEeCCccccceeeccc-cceeeeeecC-CCCeEEEEEecCCCEEEEEECCCCc-EEEEEcCCCC
Confidence 8888764 47999999999999888887754 5788999999 777776654 78999999999876 5888999999
Q ss_pred ceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeecccceeE
Q 021121 238 AVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAV 284 (317)
Q Consensus 238 ~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~ 284 (317)
.|++++|+|+++ +|++|+.|++|++||+....+ ....+.+...+.
T Consensus 366 ~V~~l~~spdg~-~l~S~s~D~tvriWdv~~~~~-~~~~~~~~~~~~ 410 (420)
T 4gga_A 366 RVLSLTMSPDGA-TVASAAADETLRLWRCFELDP-ARRREREKASAA 410 (420)
T ss_dssp CEEEEEECTTSS-CEEEEETTTEEEEECCSCSSC-C-----------
T ss_pred CEEEEEEcCCCC-EEEEEecCCeEEEEECCCCCc-cchhhhccCCcc
Confidence 999999999998 799999999999999987653 334444444333
No 112
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-36 Score=272.43 Aligned_cols=252 Identities=18% Similarity=0.247 Sum_probs=209.3
Q ss_pred ecCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCC--CCCeEEEEEcC
Q 021121 5 KTPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSES--HDSLLIAAVAD 82 (317)
Q Consensus 5 ~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~l~~~~~d 82 (317)
.|...|++++|+| ++.++++++. ||.|++||+..... ........|...|++++|+|+ + .+|++|+.|
T Consensus 7 gH~~~V~~l~~s~--dg~~latg~~------dg~I~vwd~~~~~~-~~~~~l~~h~~~V~~l~~s~~~~~-~~l~s~s~D 76 (753)
T 3jro_A 7 AHNELIHDAVLDY--YGKRLATCSS------DKTIKIFEVEGETH-KLIDTLTGHEGPVWRVDWAHPKFG-TILASCSYD 76 (753)
T ss_dssp -CCCCEEEECCCS--SSCCEEEEET------TTEEEEEEEETTEE-EEEEEECCCSSCEEEEEECCTTSC-SEEEEEETT
T ss_pred cCcceeEEEEECC--CCCeEEEEEC------CCcEEEEecCCCCC-ccceeccCCcCceEEEEecCCCCC-CEEEEEeCC
Confidence 3789999999999 5666666665 99999999975431 112223368999999999987 6 699999999
Q ss_pred CeEEEEEeCCCCCCCCceeeccCCcceEEEEEecC--CCCEEEEEcCCCEEEEEEcCCC--ceeEEeeccccceEEEEEe
Q 021121 83 GSVKIYDTALPPTANPIRSLHEHTREVHSADYNPT--RRDSFITSSWDDTVKLWTVDRP--TSVRTFKEHAYCVYNATWN 158 (317)
Q Consensus 83 g~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~l~~~~~dg~v~iwd~~~~--~~~~~~~~~~~~v~~~~~~ 158 (317)
|.|++||+..+ .......+..|...|.+++|+|+ +. .+++|+.||.|++||++++ .....+..|...|.+++|+
T Consensus 77 g~I~vwd~~~~-~~~~~~~~~~h~~~V~~v~~sp~~~~~-~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~ 154 (753)
T 3jro_A 77 GKVLIWKEENG-RWSQIAVHAVHSASVNSVQWAPHEYGP-LLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWA 154 (753)
T ss_dssp SCEEEEEEETT-EEEEEEEECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEEC
T ss_pred CeEEEEECCCC-cccccccccCCCCCeEEEEECCCCCCC-EEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEec
Confidence 99999999865 22256677889999999999999 76 9999999999999999887 3445667889999999999
Q ss_pred cC------------CCCeEEEEeCCCeEEEEeCCCCC----ceeeeccCccceEEEEecCCC---CcEEEEEecCCcEEE
Q 021121 159 PR------------HSDVFCSASGDCTLRIWDVREMG----STMIIPAHEFEILACDWNKYD---DCLIASASVDKSIKI 219 (317)
Q Consensus 159 ~~------------~~~~l~~~~~dg~i~i~d~~~~~----~~~~~~~~~~~v~~i~~~~~~---~~~l~~~~~d~~i~v 219 (317)
|. ++.++++|+.||.|++||++++. ....+..|..+|.+++|+| + +.++++++.||.|++
T Consensus 155 p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp-~~~~~~~l~s~s~Dg~I~i 233 (753)
T 3jro_A 155 PATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSP-TVLLRSYLASVSQDRTCII 233 (753)
T ss_dssp CCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECC-CCSSSEEEEEEESSSCEEE
T ss_pred CcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEecc-CCCCCCEEEEEecCCEEEE
Confidence 94 37899999999999999999873 4456778999999999999 7 899999999999999
Q ss_pred EEccCCCc----cEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEeccccc
Q 021121 220 WDVRNYRV----PIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVED 270 (317)
Q Consensus 220 ~d~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~ 270 (317)
||+++... .......|...|++++|+|+++ +|++++.||.|++||+....
T Consensus 234 wd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~-~l~s~s~Dg~I~vwd~~~~~ 287 (753)
T 3jro_A 234 WTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN-VLALSGGDNKVTLWKENLEG 287 (753)
T ss_dssp EEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTC-CEEEECSSSCEECCBCCSSS
T ss_pred ecCCCCCCcceeEEeccCCCCCceEEEEEcCCCC-EEEEEcCCCEEEEEecCCCC
Confidence 99988642 2233345888999999999998 69999999999999998644
No 113
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=8.4e-35 Score=246.84 Aligned_cols=285 Identities=14% Similarity=0.139 Sum_probs=226.4
Q ss_pred ecCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceee---eeecCCCCeeEEEecCCCCCeEEEEEc
Q 021121 5 KTPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTEL---VAFDTADGVYDLAWSESHDSLLIAAVA 81 (317)
Q Consensus 5 ~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~~l~~~~~ 81 (317)
.....+.+++|+| ++.+++++.. ++.|++||+...... ... ....|...|.+++|+|++ .++++++.
T Consensus 120 ~~~~~~~~~~~s~--~~~~~~~~~~------~~~i~~~d~~~g~~~-~~~~~~~~~~~~~~v~~~~~~~~~-~~~~s~~~ 189 (433)
T 3bws_A 120 KTGFQPKSVRFID--NTRLAIPLLE------DEGMDVLDINSGQTV-RLSPPEKYKKKLGFVETISIPEHN-ELWVSQMQ 189 (433)
T ss_dssp ECSSCBCCCEESS--SSEEEEEBTT------SSSEEEEETTTCCEE-EECCCHHHHTTCCEEEEEEEGGGT-EEEEEEGG
T ss_pred cCCCCceEEEEeC--CCeEEEEeCC------CCeEEEEECCCCeEe-eecCcccccccCCceeEEEEcCCC-EEEEEECC
Confidence 3455677899999 6788887765 889999999876521 111 112577789999999987 69999999
Q ss_pred CCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeeccccceEEEEEecCC
Q 021121 82 DGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRH 161 (317)
Q Consensus 82 dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 161 (317)
|+.|++||++.. +....+..|...+.+++|+|+++.++++++.|+.|++||+++++.+..+..+ ..+.+++|+|+
T Consensus 190 d~~v~~~d~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~- 264 (433)
T 3bws_A 190 ANAVHVFDLKTL---AYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKD- 264 (433)
T ss_dssp GTEEEEEETTTC---CEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECTT-
T ss_pred CCEEEEEECCCc---eEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcCC-
Confidence 999999999765 6667777889999999999999844466668999999999999888777654 45999999999
Q ss_pred CCeEEEEe--------CCCeEEEEeCCCCCceeeeccCccceEEEEecCCCCc-EEEEEecCCcEEEEEccCCCccEEEE
Q 021121 162 SDVFCSAS--------GDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDC-LIASASVDKSIKIWDVRNYRVPIAVL 232 (317)
Q Consensus 162 ~~~l~~~~--------~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~ 232 (317)
++.+++++ .||.|++||+++++....+. +...+.+++|+| +++ ++++++.++.|++||+++.+. ...+
T Consensus 265 g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~-~g~~l~~~~~~~~~v~v~d~~~~~~-~~~~ 341 (433)
T 3bws_A 265 GKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIG-PPGNKRHIVSGN-TENKIYVSDMCCSKIEVYDLKEKKV-QKSI 341 (433)
T ss_dssp SSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEE-EEECEEEEEECS-STTEEEEEETTTTEEEEEETTTTEE-EEEE
T ss_pred CCEEEEEECCCCccccCCCeEEEEECCCCcEEeecc-CCCCcceEEECC-CCCEEEEEecCCCEEEEEECCCCcE-EEEe
Confidence 77777777 58899999999887766553 556789999999 664 667778999999999997653 4444
Q ss_pred ecCCCceeEEEecCCCCeeEEeeec---------------CCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEE
Q 021121 233 NGHGYAVRKVKFSPHRRNLLASCSY---------------DMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLA 297 (317)
Q Consensus 233 ~~~~~~v~~~~~~~~~~~~l~~~~~---------------d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 297 (317)
. +...+.+++|+|+++ ++++++. ||.|++||+.+++ ....+.. ...+.+++|+|+ +++|+
T Consensus 342 ~-~~~~~~~~~~s~dg~-~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~-~~~~~~~-~~~~~~~~~s~d-g~~l~ 416 (433)
T 3bws_A 342 P-VFDKPNTIALSPDGK-YLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDT-VKEFWEA-GNQPTGLDVSPD-NRYLV 416 (433)
T ss_dssp E-CSSSEEEEEECTTSS-EEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTE-EEEEEEC-SSSEEEEEECTT-SCEEE
T ss_pred c-CCCCCCeEEEcCCCC-EEEEEecCCCccccccccccccceEEEEEECCCCc-EEEEecC-CCCCceEEEcCC-CCEEE
Confidence 4 677899999999998 4666654 5799999998876 4455554 456899999999 67777
Q ss_pred Eee-cCCcEEEEecCC
Q 021121 298 STG-WDELVYVWQQGM 312 (317)
Q Consensus 298 s~~-~dg~i~~w~~~~ 312 (317)
+++ .|+.|++|+++.
T Consensus 417 ~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 417 ISDFLDHQIRVYRRDG 432 (433)
T ss_dssp EEETTTTEEEEEEETT
T ss_pred EEECCCCeEEEEEecC
Confidence 666 599999999863
No 114
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=2.2e-34 Score=241.11 Aligned_cols=268 Identities=14% Similarity=0.147 Sum_probs=210.9
Q ss_pred eEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCcee
Q 021121 22 RLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRS 101 (317)
Q Consensus 22 ~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~ 101 (317)
.++++++. ++.|++||+.... .+..+.+...+.+++|+|++..++++++.++.|++||+.++ +....
T Consensus 3 ~l~vs~~~------d~~v~v~d~~~~~----~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~---~~~~~ 69 (391)
T 1l0q_A 3 FAYIANSE------SDNISVIDVTSNK----VTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATN---NVIAT 69 (391)
T ss_dssp EEEEEETT------TTEEEEEETTTTE----EEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTT---EEEEE
T ss_pred EEEEEcCC------CCEEEEEECCCCe----EEEEeecCCCcceEEECCCCCEEEEECCCCCeEEEEECCCC---eEEEE
Confidence 45555554 8999999998654 33334455679999999998645577778999999999765 55555
Q ss_pred eccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeeccccceEEEEEecCCCCeE-EEEeCCCeEEEEeCC
Q 021121 102 LHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVF-CSASGDCTLRIWDVR 180 (317)
Q Consensus 102 ~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~~~~~dg~i~i~d~~ 180 (317)
+..+. .+.+++|+|+++.++++++.++.|++||+.+++.+..+..+ ..+.+++|+|+ ++.+ ++++.++.|++||++
T Consensus 70 ~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~d-g~~l~~~~~~~~~v~~~d~~ 146 (391)
T 1l0q_A 70 VPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPD-GKKLYVTNNGDKTVSVINTV 146 (391)
T ss_dssp EECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTT-SSEEEEEETTTTEEEEEETT
T ss_pred EECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCC-CCEEEEEeCCCCEEEEEECC
Confidence 55444 89999999999844466677899999999999888877754 46899999999 5544 788889999999999
Q ss_pred CCCceeeeccCccceEEEEecCCCCcEE-EEEecCCcEEEEEccCCCccEEEEecCCCceeEEEecCCCCeeEEeee---
Q 021121 181 EMGSTMIIPAHEFEILACDWNKYDDCLI-ASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCS--- 256 (317)
Q Consensus 181 ~~~~~~~~~~~~~~v~~i~~~~~~~~~l-~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--- 256 (317)
+++....+..+ ..+.+++|+| +++.+ ++++.++.|++||+++.+. ...+. +...+.+++|+|+++. |++++
T Consensus 147 ~~~~~~~~~~~-~~~~~~~~~~-dg~~l~~~~~~~~~v~~~d~~~~~~-~~~~~-~~~~~~~~~~~~~g~~-l~~~~~~~ 221 (391)
T 1l0q_A 147 TKAVINTVSVG-RSPKGIAVTP-DGTKVYVANFDSMSISVIDTVTNSV-IDTVK-VEAAPSGIAVNPEGTK-AYVTNVDK 221 (391)
T ss_dssp TTEEEEEEECC-SSEEEEEECT-TSSEEEEEETTTTEEEEEETTTTEE-EEEEE-CSSEEEEEEECTTSSE-EEEEEECS
T ss_pred CCcEEEEEecC-CCcceEEECC-CCCEEEEEeCCCCEEEEEECCCCeE-EEEEe-cCCCccceEECCCCCE-EEEEecCc
Confidence 98888777755 4568999999 77666 6778889999999988653 44444 5668899999999985 65555
Q ss_pred cCCeEEEEecccccceeeeeecccceeEeEEEEeccCCe-EEEeecCCcEEEEecCCC
Q 021121 257 YDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGL-LASTGWDELVYVWQQGMD 313 (317)
Q Consensus 257 ~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-l~s~~~dg~i~~w~~~~~ 313 (317)
.++.|++||+.+++ .+..+..|. .+.+++|+|+ ++. +++++.|+.|++||+...
T Consensus 222 ~~~~v~~~d~~~~~-~~~~~~~~~-~~~~~~~s~d-g~~l~~s~~~d~~v~v~d~~~~ 276 (391)
T 1l0q_A 222 YFNTVSMIDTGTNK-ITARIPVGP-DPAGIAVTPD-GKKVYVALSFXNTVSVIDTATN 276 (391)
T ss_dssp SCCEEEEEETTTTE-EEEEEECCS-SEEEEEECTT-SSEEEEEETTTTEEEEEETTTT
T ss_pred CCCcEEEEECCCCe-EEEEEecCC-CccEEEEccC-CCEEEEEcCCCCEEEEEECCCC
Confidence 68999999998876 455666654 4789999999 554 478889999999999764
No 115
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.5e-35 Score=248.75 Aligned_cols=242 Identities=14% Similarity=0.067 Sum_probs=198.9
Q ss_pred CCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeec-------------------------------------
Q 021121 61 DGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLH------------------------------------- 103 (317)
Q Consensus 61 ~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~------------------------------------- 103 (317)
.++.+++|+|+|. +|+++ .++.|++||+.+++....+..+.
T Consensus 5 ~p~~~v~~s~dg~-~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 5 HPLQNLLTSRDGS-LVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp CCCCEEEECSSSS-EEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred ccEEEEEecCCCC-EEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 4689999999984 65555 57899999998763110222211
Q ss_pred -----------------cCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcC--CCceeEEee--ccccceEEEEEecCCC
Q 021121 104 -----------------EHTREVHSADYNPTRRDSFITSSWDDTVKLWTVD--RPTSVRTFK--EHAYCVYNATWNPRHS 162 (317)
Q Consensus 104 -----------------~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~--~~~~~~~~~--~~~~~v~~~~~~~~~~ 162 (317)
.|...|.+++|+|+++.++++++.||.|++||+. +++.+..+. .+...|.+++|+|+ +
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~-~ 161 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAED-D 161 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTT-S
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCC-C
Confidence 3445799999999998335899999999999999 888888776 46688999999998 8
Q ss_pred CeEEEEeCCCeEEEEeCCCCCcee----eeccCccceEEEEecCCC---CcEEEEEecCCcEEEEEccCCCccEEEEecC
Q 021121 163 DVFCSASGDCTLRIWDVREMGSTM----IIPAHEFEILACDWNKYD---DCLIASASVDKSIKIWDVRNYRVPIAVLNGH 235 (317)
Q Consensus 163 ~~l~~~~~dg~i~i~d~~~~~~~~----~~~~~~~~v~~i~~~~~~---~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~ 235 (317)
.+|++++.+|.+++|++.+++... .+.+|...|.+++|+| + +++|++++.|+.|++||+++.+.....+.+|
T Consensus 162 ~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp-~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h 240 (450)
T 2vdu_B 162 TTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIK-DSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGH 240 (450)
T ss_dssp SEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEE-CTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCC
T ss_pred CEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcC-CCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCC
Confidence 999999999999999998876554 6778999999999999 8 8999999999999999999876533346689
Q ss_pred CCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeec-------------------------ccceeEeEEEEe
Q 021121 236 GYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDH-------------------------HTEFAVGVDMSV 290 (317)
Q Consensus 236 ~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~-------------------------~~~~v~~~~~~~ 290 (317)
...|++++|+ +++ +|++++.|+.|++||+.+++ .+..+.. ....|.+++|+|
T Consensus 241 ~~~v~~~~~s-d~~-~l~s~~~d~~v~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~ 317 (450)
T 2vdu_B 241 KHFVSSICCG-KDY-LLLSAGGDDKIFAWDWKTGK-NLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSK 317 (450)
T ss_dssp SSCEEEEEEC-STT-EEEEEESSSEEEEEETTTCC-EEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECS
T ss_pred CCceEEEEEC-CCC-EEEEEeCCCeEEEEECCCCc-EeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeC
Confidence 9999999999 888 79999999999999999876 3344432 235689999999
Q ss_pred ccCCeEEEee-cCCcEEEEec
Q 021121 291 LVEGLLASTG-WDELVYVWQQ 310 (317)
Q Consensus 291 ~~~~~l~s~~-~dg~i~~w~~ 310 (317)
+ +.+|++++ .|+.|++|++
T Consensus 318 ~-~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 318 N-LPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp S-SSEEEEEETTCSEEEEEEE
T ss_pred C-CCEEEEEECCCCeEEEEEe
Confidence 8 77888888 8999999999
No 116
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=8.9e-35 Score=246.88 Aligned_cols=232 Identities=27% Similarity=0.474 Sum_probs=206.4
Q ss_pred cCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcC
Q 021121 58 DTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVD 137 (317)
Q Consensus 58 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~ 137 (317)
++...|.+++| ++ .++++|+.||.|++||+.++ +....+.+|...|.+++| ++. ++++|+.||.|++||++
T Consensus 131 ~~~~~v~~~~~--d~-~~l~~g~~dg~i~iwd~~~~---~~~~~~~~h~~~v~~l~~--~~~-~l~sg~~dg~i~vwd~~ 201 (435)
T 1p22_A 131 ETSKGVYCLQY--DD-QKIVSGLRDNTIKIWDKNTL---ECKRILTGHTGSVLCLQY--DER-VIITGSSDSTVRVWDVN 201 (435)
T ss_dssp SSCCCEEEEEC--CS-SEEEEEESSSCEEEEESSSC---CEEEEECCCSSCEEEEEC--CSS-EEEEEETTSCEEEEESS
T ss_pred CCCCcEEEEEE--CC-CEEEEEeCCCeEEEEeCCCC---eEEEEEcCCCCcEEEEEE--CCC-EEEEEcCCCeEEEEECC
Confidence 46677999888 45 69999999999999999766 677788899999999999 455 99999999999999999
Q ss_pred CCceeEEeeccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCce---eeeccCccceEEEEecCCCCcEEEEEecC
Q 021121 138 RPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGST---MIIPAHEFEILACDWNKYDDCLIASASVD 214 (317)
Q Consensus 138 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~---~~~~~~~~~v~~i~~~~~~~~~l~~~~~d 214 (317)
+++.+..+..|...|.+++|+ +..+++++.||.|++||+++++.. ..+.+|...|.++++ +++++++++.|
T Consensus 202 ~~~~~~~~~~h~~~v~~l~~~---~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~s~~~d 275 (435)
T 1p22_A 202 TGEMLNTLIHHCEAVLHLRFN---NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF---DDKYIVSASGD 275 (435)
T ss_dssp SCCEEEEECCCCSCEEEEECC---TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE---ETTEEEEEETT
T ss_pred CCcEEEEEcCCCCcEEEEEEc---CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe---CCCEEEEEeCC
Confidence 999999999999999999997 458999999999999999988765 567789999999998 56799999999
Q ss_pred CcEEEEEccCCCccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEEeccCC
Q 021121 215 KSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEG 294 (317)
Q Consensus 215 ~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 294 (317)
+.|++||+++.+ .+..+.+|...|.++.|+ +. ++++|+.||.|++||+++++ .+..+.+|...|.+++| + +.
T Consensus 276 g~i~vwd~~~~~-~~~~~~~~~~~v~~~~~~--~~-~l~~g~~dg~i~iwd~~~~~-~~~~~~~h~~~v~~~~~--~-~~ 347 (435)
T 1p22_A 276 RTIKVWNTSTCE-FVRTLNGHKRGIACLQYR--DR-LVVSGSSDNTIRLWDIECGA-CLRVLEGHEELVRCIRF--D-NK 347 (435)
T ss_dssp SEEEEEETTTCC-EEEEEECCSSCEEEEEEE--TT-EEEEEETTSCEEEEETTTCC-EEEEECCCSSCEEEEEC--C-SS
T ss_pred CeEEEEECCcCc-EEEEEcCCCCcEEEEEeC--CC-EEEEEeCCCeEEEEECCCCC-EEEEEeCCcCcEEEEEe--c-CC
Confidence 999999999876 478888999999999995 44 79999999999999999876 66788899999999999 3 78
Q ss_pred eEEEeecCCcEEEEecCC
Q 021121 295 LLASTGWDELVYVWQQGM 312 (317)
Q Consensus 295 ~l~s~~~dg~i~~w~~~~ 312 (317)
+|++|+.||.|++||+..
T Consensus 348 ~l~sg~~dg~i~vwd~~~ 365 (435)
T 1p22_A 348 RIVSGAYDGKIKVWDLVA 365 (435)
T ss_dssp EEEEEETTSCEEEEEHHH
T ss_pred EEEEEeCCCcEEEEECCC
Confidence 999999999999999854
No 117
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-35 Score=243.13 Aligned_cols=233 Identities=12% Similarity=0.110 Sum_probs=185.5
Q ss_pred EecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcC---------
Q 021121 67 AWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVD--------- 137 (317)
Q Consensus 67 ~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~--------- 137 (317)
.+.+++ .++++|+.||.|++||+..+ +.+..+. ...|.++.|+|. +++++.|+.|++|+..
T Consensus 43 ~~~~d~-~~l~sg~~Dg~v~iwd~~~~---~~~~~~~--~~~v~~~~~~~~----~~s~s~D~~i~~w~~~~~~~~~~~~ 112 (343)
T 3lrv_A 43 SMYYDK-WVCMCRCEDGALHFTQLKDS---KTITTIT--TPNPRTGGEHPA----IISRGPCNRLLLLYPGNQITILDSK 112 (343)
T ss_dssp SSSEEE-EEEEEEEETTEEEEEEESSS---SCEEEEE--EECCCTTCCCCS----EEEECSTTEEEEEETTTEEEEEETT
T ss_pred hhcCCC-CEEEEECCCCcEEEEECCCC---cEEEEEe--cCCceeeeeCCc----eEEecCCCeEEEEEccCceEEeecC
Confidence 344555 69999999999999999876 5555554 466778888876 8999999999999765
Q ss_pred CCceeEEee-ccccceEEEEEec--CCCCeEEEEeCCCeEEEEeCCCCCceeeec-cCccceEEEEecCCCCcEEEEEec
Q 021121 138 RPTSVRTFK-EHAYCVYNATWNP--RHSDVFCSASGDCTLRIWDVREMGSTMIIP-AHEFEILACDWNKYDDCLIASASV 213 (317)
Q Consensus 138 ~~~~~~~~~-~~~~~v~~~~~~~--~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~v~~i~~~~~~~~~l~~~~~ 213 (317)
+++.+..+. .|..+|.+++|+| + ++++++++.||.|++||+++++...... .+...+.+++|+| ++.+|++|+.
T Consensus 113 ~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~p-dg~~lasg~~ 190 (343)
T 3lrv_A 113 TNKVLREIEVDSANEIIYMYGHNEVN-TEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHK-DSLLLALYSP 190 (343)
T ss_dssp TCCEEEEEECCCSSCEEEEECCC----CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECT-TSCEEEEECT
T ss_pred CcceeEEeecCCCCCEEEEEcCCCCC-CCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECC-CCCEEEEEcC
Confidence 444444443 5668899999999 8 8999999999999999999988866553 3555799999999 9999999999
Q ss_pred CCcEEEEEccCCCccEEEEec-CCCceeEEEecCCCCeeEEeeecCCeEEEEecccccce--eeeeecccceeE--eEEE
Q 021121 214 DKSIKIWDVRNYRVPIAVLNG-HGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDAL--VGRYDHHTEFAV--GVDM 288 (317)
Q Consensus 214 d~~i~v~d~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~--~~~~~~~~~~v~--~~~~ 288 (317)
|+.|++||+++++.....+.. |..+|++++|+|++. +|++++ |+.|++||+++.+.. +..+..|...+. +++|
T Consensus 191 dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~-~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (343)
T 3lrv_A 191 DGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGY-WMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDI 268 (343)
T ss_dssp TSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSS-EEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEE
T ss_pred CCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCC-EEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEE
Confidence 999999999998764367777 999999999999998 688888 559999999987633 222223444444 5999
Q ss_pred EeccCCeEEEeec-CCcEEEEecCCCC
Q 021121 289 SVLVEGLLASTGW-DELVYVWQQGMDP 314 (317)
Q Consensus 289 ~~~~~~~l~s~~~-dg~i~~w~~~~~~ 314 (317)
+|+ +.+|++++. |+.+++|++....
T Consensus 269 ~~~-g~~l~~~s~~d~~i~v~~~~~~~ 294 (343)
T 3lrv_A 269 DDS-GKNMIAYSNESNSLTIYKFDKKT 294 (343)
T ss_dssp CTT-SSEEEEEETTTTEEEEEEECTTT
T ss_pred CCC-CCEEEEecCCCCcEEEEEEcccc
Confidence 998 889999888 9999999996643
No 118
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=4.4e-34 Score=236.89 Aligned_cols=247 Identities=18% Similarity=0.267 Sum_probs=202.2
Q ss_pred cCCCCeeEEEecCCC--CCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEE
Q 021121 58 DTADGVYDLAWSESH--DSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWT 135 (317)
Q Consensus 58 ~~~~~v~~~~~~~~~--~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd 135 (317)
.|.+.|++++|+|++ ..+|++|+.||.|++||+... .......+..|...|.+++|+|++. +|++++.||.|++||
T Consensus 37 ~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~dg~v~iwd 114 (368)
T 3mmy_A 37 SPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDS-GQTIPKAQQMHTGPVLDVCWSDDGS-KVFTASCDKTAKMWD 114 (368)
T ss_dssp CCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTT-SCEEEEEEEECSSCEEEEEECTTSS-EEEEEETTSEEEEEE
T ss_pred CCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCC-CceeEEEeccccCCEEEEEECcCCC-EEEEEcCCCcEEEEE
Confidence 789999999999984 369999999999999999862 1223366788999999999999988 999999999999999
Q ss_pred cCCCceeEEeeccccceEEEEE--ecCCCCeEEEEeCCCeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEec
Q 021121 136 VDRPTSVRTFKEHAYCVYNATW--NPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASV 213 (317)
Q Consensus 136 ~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~ 213 (317)
+++++... +..|...|.+++| +|+ +.++++++.||.|++||+++++.+..+..+. .+.++.+.+ ..+++++.
T Consensus 115 ~~~~~~~~-~~~~~~~v~~~~~~~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~ 188 (368)
T 3mmy_A 115 LSSNQAIQ-IAQHDAPVKTIHWIKAPN-YSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE-RCYCADVIY---PMAVVATA 188 (368)
T ss_dssp TTTTEEEE-EEECSSCEEEEEEEECSS-CEEEEEEETTSEEEEECSSCSSCSEEEECSS-CEEEEEEET---TEEEEEEG
T ss_pred cCCCCcee-eccccCceEEEEEEeCCC-CCEEEEccCCCcEEEEECCCCcEEEEEecCC-CceEEEecC---CeeEEEeC
Confidence 99887766 4569999999999 777 7889999999999999999999888887654 566666654 47888889
Q ss_pred CCcEEEEEccCCCccEEEEe-cCCCceeEEEecCCCC---eeEEeeecCCeEEEEeccccc--ceeeeeecccc------
Q 021121 214 DKSIKIWDVRNYRVPIAVLN-GHGYAVRKVKFSPHRR---NLLASCSYDMTVCLWDFMVED--ALVGRYDHHTE------ 281 (317)
Q Consensus 214 d~~i~v~d~~~~~~~~~~~~-~~~~~v~~~~~~~~~~---~~l~~~~~d~~i~vwd~~~~~--~~~~~~~~~~~------ 281 (317)
++.+++||++.......... .+...+.++.+.++.. ..+++++.||.|++||++... .....+..|..
T Consensus 189 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (368)
T 3mmy_A 189 ERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTS 268 (368)
T ss_dssp GGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----C
T ss_pred CCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeeccccccc
Confidence 99999999987654333332 2344566666665544 139999999999999998763 24456666665
Q ss_pred ------eeEeEEEEeccCCeEEEeecCCcEEEEecCCC
Q 021121 282 ------FAVGVDMSVLVEGLLASTGWDELVYVWQQGMD 313 (317)
Q Consensus 282 ------~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~ 313 (317)
.|++++|+|+ +.+|++++.||.|++||+...
T Consensus 269 ~~~~~~~v~~~~~sp~-~~~l~s~~~dg~i~iwd~~~~ 305 (368)
T 3mmy_A 269 APQDIYAVNGIAFHPV-HGTLATVGSDGRFSFWDKDAR 305 (368)
T ss_dssp CCEEECCEEEEEECTT-TCCEEEEETTSCEEEEETTTT
T ss_pred ccccccceEEEEEecC-CCEEEEEccCCeEEEEECCCC
Confidence 7999999998 789999999999999999864
No 119
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.2e-35 Score=246.78 Aligned_cols=256 Identities=13% Similarity=0.122 Sum_probs=199.8
Q ss_pred cCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeE
Q 021121 6 TPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSV 85 (317)
Q Consensus 6 ~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 85 (317)
|+..|++++|+|+ + . ++.+.+|+.+... +....+...|.+++|+|+| .+||+++.||.|
T Consensus 51 h~~~v~~V~FsPd--g-------~------~~~~~~~~~~~~~-----~~~~~~~~~V~~vawSPdG-~~LAs~s~dg~V 109 (588)
T 2j04_A 51 NSKNLFHVKEFPL--E-------F------ENKLDFELAQQNG-----LLNSQPVCYPRVCKPSPID-DWMAVLSNNGNV 109 (588)
T ss_dssp BGGGTEEEEEECC--C-------C------CCTTTTSCCCSSC-----SSTTSCSCCEEEEEECSSS-SCEEEEETTSCE
T ss_pred CCccEEEEEECCC--C-------C------cceEEEEeCCCce-----EeecCCCCcEEEEEECCCC-CEEEEEeCCCcE
Confidence 6788999999994 4 2 5566666644222 2222457789999999998 699999999999
Q ss_pred EEEEeCCCCCCCCceeeccCCc-----ceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCce-------eEEe----eccc
Q 021121 86 KIYDTALPPTANPIRSLHEHTR-----EVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTS-------VRTF----KEHA 149 (317)
Q Consensus 86 ~v~~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~-------~~~~----~~~~ 149 (317)
++||.+ ..+..+. |.. .+.+++|+|+|+ +|++|+.||+|++||+.++.. +..+ .+|.
T Consensus 110 ~iwd~~-----~~l~~l~-~~~~~~~~sv~svafSPDG~-~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~ 182 (588)
T 2j04_A 110 SVFKDN-----KMLTNLD-SKGNLSSRTYHCFEWNPIES-SIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSK 182 (588)
T ss_dssp EEEETT-----EEEEECC-CSSCSTTTCEEEEEECSSSS-CEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCC
T ss_pred EEEeCC-----ceeeecc-CCCccccccEEEEEEcCCCC-EEEEEcCCCEEEEEECCCCccccccceeeeeeeccccccc
Confidence 999943 2444555 555 599999999998 999999999999999998753 5665 5677
Q ss_pred cceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCce---eee-ccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCC
Q 021121 150 YCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGST---MII-PAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNY 225 (317)
Q Consensus 150 ~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~---~~~-~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~ 225 (317)
..|.+++|+|+ + +++++.|+.|++||+.+++.. ..+ ..|...|.+++|+ ++.+++++ +++|++||+.+.
T Consensus 183 ~~V~sVawSPd-g--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs---g~~LASa~-~~tIkLWd~~~~ 255 (588)
T 2j04_A 183 DWVTHIVWYED-V--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV---DYKVVLTC-PGYVHKIDLKNY 255 (588)
T ss_dssp CCEEEEEEETT-E--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE---TTEEEEEC-SSEEEEEETTTT
T ss_pred ccEEEEEEcCC-c--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE---CCEEEEEe-CCeEEEEECCCC
Confidence 89999999998 5 778999999999999887642 455 4788899999998 47888887 699999999876
Q ss_pred CccEEEEecCCCceeEEEe--cCCCCeeEEeeecCCeEEEEeccc-----cc-----------------ceeeeeecccc
Q 021121 226 RVPIAVLNGHGYAVRKVKF--SPHRRNLLASCSYDMTVCLWDFMV-----ED-----------------ALVGRYDHHTE 281 (317)
Q Consensus 226 ~~~~~~~~~~~~~v~~~~~--~~~~~~~l~~~~~d~~i~vwd~~~-----~~-----------------~~~~~~~~~~~ 281 (317)
+. .....+|...|..++| +|++. .|++++.||+ ++|.... .. .....+.+ ..
T Consensus 256 ~~-~~~~~gh~~~V~~va~~~s~d~~-~La~a~edG~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~g~~l~~~~~-~~ 331 (588)
T 2j04_A 256 SI-SSLKTGSLENFHIIPLNHEKEST-ILLMSNKTSY-KVLLEDELHVTADNIIAPYLEKKFKKWSTIWNEFNNYET-TL 331 (588)
T ss_dssp EE-EEEECSCCSCCCEEEETTCSSCE-EEEECSSCEE-EEEESSSEEEECCCSSHHHHHHHHHHTTTTTTSSSSSCC-EE
T ss_pred eE-EEEEcCCCceEEEEEeeeCCCCC-EEEEEcCCCC-EEEeeccEEECCCceEEEEcCCEEEEEECCCCceeeecc-ce
Confidence 53 2333389999999999 99997 6999999999 9998631 10 11223333 56
Q ss_pred eeEeEEEEeccCCeEEEeec
Q 021121 282 FAVGVDMSVLVEGLLASTGW 301 (317)
Q Consensus 282 ~v~~~~~~~~~~~~l~s~~~ 301 (317)
.|++++|+|+ ++.+|+++.
T Consensus 332 ~I~~va~SPd-G~~lA~~~~ 350 (588)
T 2j04_A 332 VIHGISLSPD-GYSIAIVYD 350 (588)
T ss_dssp EEEEEEECTT-SSEEEEEEE
T ss_pred EEEEEEECCC-CCEEEEEEe
Confidence 7999999999 788988873
No 120
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=5.6e-34 Score=235.39 Aligned_cols=236 Identities=14% Similarity=0.127 Sum_probs=186.4
Q ss_pred ecCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEc
Q 021121 57 FDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTV 136 (317)
Q Consensus 57 ~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~ 136 (317)
..|...|++++|+|++ .+|++|+.++ +++|++... ...... +...+..+++.++++.++++++.|+.|++||+
T Consensus 16 ~~h~~~V~~v~fs~dg-~~la~g~~~~-~~iw~~~~~---~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~ 88 (355)
T 3vu4_A 16 NHVSNPVTDYEFNQDQ-SCLILSTLKS-FEIYNVHPV---AHIMSQ--EMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDD 88 (355)
T ss_dssp ---CCCCCEEEECTTS-SEEEEECSSE-EEEEEETTE---EEEEEE--ECSCCCEEEECTTSSEEEEECSSTTEEEEEET
T ss_pred ccCCCceEEEEECCCC-CEEEEEcCCE-EEEEecCCc---ceeeee--ecCCeEEEEEcCCCCEEEEEECCccEEEEEEC
Confidence 3688999999999998 5888888765 789998753 332222 22357778888887744477888999999999
Q ss_pred CCCceeEEeeccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCC-CceeeeccCccceEEEEecCCCCcEEEE--Eec
Q 021121 137 DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREM-GSTMIIPAHEFEILACDWNKYDDCLIAS--ASV 213 (317)
Q Consensus 137 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~v~~i~~~~~~~~~l~~--~~~ 213 (317)
.+++.+..+. +...|.+++++++ .++++ .++.|++||++++ +.+..+.. +...+++++ .++++ |+.
T Consensus 89 ~~~~~~~~~~-~~~~v~~v~~~~~---~~~~~-~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~---~~la~~sg~~ 157 (355)
T 3vu4_A 89 VKKQDVSRIK-VDAPVKDLFLSRE---FIVVS-YGDVISVFKFGNPWKRITDDIR---FGGVCEFSN---GLLVYSNEFN 157 (355)
T ss_dssp TTTEEEEEEE-CSSCEEEEEECSS---EEEEE-ETTEEEEEESSTTCCBSSCCEE---EEEEEEEET---TEEEEEESSC
T ss_pred CCCcEEEEEE-CCCceEEEEEcCC---EEEEE-EcCEEEEEECCCCceeeEEecc---CCceEEEEc---cEEEEeCCCc
Confidence 9999988887 6678999999875 34343 4789999999988 66666554 444556665 45555 689
Q ss_pred CCcEEEEEccCCC--------------cc-EEEEecCCCceeEEEecCCCCeeEEeeecCCe-EEEEecccccceeeeee
Q 021121 214 DKSIKIWDVRNYR--------------VP-IAVLNGHGYAVRKVKFSPHRRNLLASCSYDMT-VCLWDFMVEDALVGRYD 277 (317)
Q Consensus 214 d~~i~v~d~~~~~--------------~~-~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~-i~vwd~~~~~~~~~~~~ 277 (317)
+|.|++||+++.+ .+ +..+.+|...|++++|+|+++ +|++++.|++ |++||+++++ .+..+.
T Consensus 158 ~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~-~l~s~s~d~~~v~iwd~~~~~-~~~~~~ 235 (355)
T 3vu4_A 158 LGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSD-MVATCSQDGTIIRVFKTEDGV-LVREFR 235 (355)
T ss_dssp TTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSS-EEEEEETTCSEEEEEETTTCC-EEEEEE
T ss_pred CcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCC-EEEEEeCCCCEEEEEECCCCc-EEEEEE
Confidence 9999999998754 12 677889999999999999998 7999999998 9999999887 455666
Q ss_pred -c-ccceeEeEEEEeccCCeEEEeecCCcEEEEecCCC
Q 021121 278 -H-HTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGMD 313 (317)
Q Consensus 278 -~-~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~ 313 (317)
+ |...|.+++|+|+ +.+|++++.|+.|++||+...
T Consensus 236 ~g~h~~~v~~~~~s~~-~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 236 RGLDRADVVDMKWSTD-GSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp CTTCCSCEEEEEECTT-SCEEEEEETTCEEEEEESSCC
T ss_pred cCCCCCcEEEEEECCC-CCEEEEEECCCEEEEEEccCC
Confidence 5 9999999999999 889999999999999999764
No 121
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=1.4e-33 Score=239.42 Aligned_cols=293 Identities=11% Similarity=0.050 Sum_probs=223.5
Q ss_pred CcceeEEE---EecCCCCeEEEEEeccc-------ccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeE
Q 021121 7 PFNGYSVK---FSPFYESRLAVATAQNF-------GILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLL 76 (317)
Q Consensus 7 ~~~v~~~~---~~p~~~~~~~~~~~~~~-------~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 76 (317)
...++.++ |+|+ ...++++....+ ....++.+.+|.++........+..+.....+.+++|+|+ ..++
T Consensus 60 ~~g~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~s~~-~~~~ 137 (433)
T 3bws_A 60 NIALVEMAIPVYKDE-KEIELKLSSPGFQNSSYRIRKPEELNEKLIALDKEGITHRFISRFKTGFQPKSVRFIDN-TRLA 137 (433)
T ss_dssp TEEEEEEEEECCCTT-CCEEEEEECTTBCCEEEEESSGGGGTTCEEECCBTTCSEEEEEEEECSSCBCCCEESSS-SEEE
T ss_pred CCccEEEEEeeccCC-CcEEEEEEccccCcceeeecccCCCceEEEEECCCCCcceEEEEEcCCCCceEEEEeCC-CeEE
Confidence 34567788 8885 333333332221 1122444455655543323445555556667889999995 4688
Q ss_pred EEEEcCCeEEEEEeCCCCCCCCce-----eeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeeccccc
Q 021121 77 IAAVADGSVKIYDTALPPTANPIR-----SLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYC 151 (317)
Q Consensus 77 ~~~~~dg~i~v~~~~~~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~ 151 (317)
++++.++.|++||+..+ +... .+..|...|.+++|++++. ++++++.|+.|++||+++++.+..+..|...
T Consensus 138 ~~~~~~~~i~~~d~~~g---~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~ 213 (433)
T 3bws_A 138 IPLLEDEGMDVLDINSG---QTVRLSPPEKYKKKLGFVETISIPEHNE-LWVSQMQANAVHVFDLKTLAYKATVDLTGKW 213 (433)
T ss_dssp EEBTTSSSEEEEETTTC---CEEEECCCHHHHTTCCEEEEEEEGGGTE-EEEEEGGGTEEEEEETTTCCEEEEEECSSSS
T ss_pred EEeCCCCeEEEEECCCC---eEeeecCcccccccCCceeEEEEcCCCE-EEEEECCCCEEEEEECCCceEEEEEcCCCCC
Confidence 88888899999998865 3333 3457889999999999887 9999999999999999999999999888899
Q ss_pred eEEEEEecCCCCeE-EEEeCCCeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEe--------cCCcEEEEEc
Q 021121 152 VYNATWNPRHSDVF-CSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASAS--------VDKSIKIWDV 222 (317)
Q Consensus 152 v~~~~~~~~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~--------~d~~i~v~d~ 222 (317)
+.+++|+|+ +..+ ++++.++.|++||+++++.+..+.. ...+.+++|+| +++.+++++ .|+.|++||+
T Consensus 214 ~~~~~~~~~-~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~-~g~~l~~~~~~~~~~~~~dg~i~~~d~ 290 (433)
T 3bws_A 214 SKILLYDPI-RDLVYCSNWISEDISVIDRKTKLEIRKTDK-IGLPRGLLLSK-DGKELYIAQFSASNQESGGGRLGIYSM 290 (433)
T ss_dssp EEEEEEETT-TTEEEEEETTTTEEEEEETTTTEEEEECCC-CSEEEEEEECT-TSSEEEEEEEESCTTCSCCEEEEEEET
T ss_pred eeEEEEcCC-CCEEEEEecCCCcEEEEECCCCcEEEEecC-CCCceEEEEcC-CCCEEEEEECCCCccccCCCeEEEEEC
Confidence 999999999 5555 5666899999999999888777765 44589999999 888888887 4889999999
Q ss_pred cCCCccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEeec-
Q 021121 223 RNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGW- 301 (317)
Q Consensus 223 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~- 301 (317)
++.+. ... ..|...+.+++|+|+++.++++++.|+.|++||+.+++ ....+. +...+.+++|+|+ +++|++++.
T Consensus 291 ~~~~~-~~~-~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~-~~~~~~-~~~~~~~~~~s~d-g~~l~~~~~~ 365 (433)
T 3bws_A 291 DKEKL-IDT-IGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKK-VQKSIP-VFDKPNTIALSPD-GKYLYVSCRG 365 (433)
T ss_dssp TTTEE-EEE-EEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTE-EEEEEE-CSSSEEEEEECTT-SSEEEEEECC
T ss_pred CCCcE-Eee-ccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCc-EEEEec-CCCCCCeEEEcCC-CCEEEEEecC
Confidence 87653 333 34556889999999998777888999999999999776 444444 5677999999999 677777665
Q ss_pred --------------CCcEEEEecCCC
Q 021121 302 --------------DELVYVWQQGMD 313 (317)
Q Consensus 302 --------------dg~i~~w~~~~~ 313 (317)
||.|++||+...
T Consensus 366 ~~~~~~~~~~~g~~dg~v~~~d~~~~ 391 (433)
T 3bws_A 366 PNHPTEGYLKKGLVLGKVYVIDTTTD 391 (433)
T ss_dssp CCCTTTCTTSCCSSCCEEEEEETTTT
T ss_pred CCccccccccccccceEEEEEECCCC
Confidence 579999998764
No 122
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=1.4e-32 Score=230.08 Aligned_cols=288 Identities=12% Similarity=0.144 Sum_probs=217.5
Q ss_pred eecCcceeEEEEecCCCCe-EEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcC
Q 021121 4 FKTPFNGYSVKFSPFYESR-LAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVAD 82 (317)
Q Consensus 4 ~~~~~~v~~~~~~p~~~~~-~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 82 (317)
+.....+.+++|+| ++. +++++.. ++.|++||+.... .+..+.+...+.+++|+|+++.++++++.+
T Consensus 28 ~~~~~~~~~~~~s~--dg~~l~~~~~~------d~~i~v~d~~~~~----~~~~~~~~~~v~~~~~spdg~~l~~~~~~~ 95 (391)
T 1l0q_A 28 IPVGSNPMGAVISP--DGTKVYVANAH------SNDVSIIDTATNN----VIATVPAGSSPQGVAVSPDGKQVYVTNMAS 95 (391)
T ss_dssp EECSSSEEEEEECT--TSSEEEEEEGG------GTEEEEEETTTTE----EEEEEECSSSEEEEEECTTSSEEEEEETTT
T ss_pred eecCCCcceEEECC--CCCEEEEECCC------CCeEEEEECCCCe----EEEEEECCCCccceEECCCCCEEEEEECCC
Confidence 44566789999999 454 4455544 8999999997654 233445555899999999985444566677
Q ss_pred CeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeeccccceEEEEEecCCC
Q 021121 83 GSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHS 162 (317)
Q Consensus 83 g~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 162 (317)
+.|++||+..+ +....+.. ...+.+++|+|+++.++++++.++.|++||+.+++.+..+..+ ..+.+++|+|++.
T Consensus 96 ~~v~v~d~~~~---~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~ 170 (391)
T 1l0q_A 96 STLSVIDTTSN---TVAGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGT 170 (391)
T ss_dssp TEEEEEETTTT---EEEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSS
T ss_pred CEEEEEECCCC---eEEEEEeC-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEECCCCC
Confidence 99999999865 45555544 4578999999999844478888999999999999888888755 4579999999944
Q ss_pred CeEEEEeCCCeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEe---cCCcEEEEEccCCCccEEEEecCCCce
Q 021121 163 DVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASAS---VDKSIKIWDVRNYRVPIAVLNGHGYAV 239 (317)
Q Consensus 163 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~---~d~~i~v~d~~~~~~~~~~~~~~~~~v 239 (317)
.++++++.++.|++||+++++....+. +...+.+++|+| +++++++++ .++.|++||+++.+ .+..+..+. .+
T Consensus 171 ~l~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~-~g~~l~~~~~~~~~~~v~~~d~~~~~-~~~~~~~~~-~~ 246 (391)
T 1l0q_A 171 KVYVANFDSMSISVIDTVTNSVIDTVK-VEAAPSGIAVNP-EGTKAYVTNVDKYFNTVSMIDTGTNK-ITARIPVGP-DP 246 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEE-CSSEEEEEEECT-TSSEEEEEEECSSCCEEEEEETTTTE-EEEEEECCS-SE
T ss_pred EEEEEeCCCCEEEEEECCCCeEEEEEe-cCCCccceEECC-CCCEEEEEecCcCCCcEEEEECCCCe-EEEEEecCC-Cc
Confidence 444778889999999999987777665 456789999999 888888877 68999999998865 366666655 57
Q ss_pred eEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeeccccee---------------EeEEEEecc-------C--Ce
Q 021121 240 RKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFA---------------VGVDMSVLV-------E--GL 295 (317)
Q Consensus 240 ~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v---------------~~~~~~~~~-------~--~~ 295 (317)
.+++|+|+++.++++++.|+.|++||+.+++ +...+..|..+. ....|+.+. . ..
T Consensus 247 ~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fs~~~~~~~~~~~~~~~ 325 (391)
T 1l0q_A 247 AGIAVTPDGKKVYVALSFXNTVSVIDTATNT-ITATMAVGKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQ 325 (391)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEETTTTE-EEEEEECSSSEECCSSCEEECSSCCCCCBCCEEESCCSSEEETTCCEE
T ss_pred cEEEEccCCCEEEEEcCCCCEEEEEECCCCc-EEEEEECCcCCCccceeeecccccccccccccccccccccccccceEE
Confidence 8999999999666788899999999999876 445555443332 112233321 1 34
Q ss_pred EEEeecCCcEEEEecCCC
Q 021121 296 LASTGWDELVYVWQQGMD 313 (317)
Q Consensus 296 l~s~~~dg~i~~w~~~~~ 313 (317)
+...+.|..+++|++..+
T Consensus 326 ~~~~~~~~~~~~W~~~~g 343 (391)
T 1l0q_A 326 FTDLSKDATEWKWDFGDG 343 (391)
T ss_dssp EEECCBSCSEEEEECSSS
T ss_pred EEeCCCCceEEEEECCCC
Confidence 667778999999999654
No 123
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=8.6e-33 Score=219.72 Aligned_cols=264 Identities=11% Similarity=0.071 Sum_probs=189.3
Q ss_pred CceEEEEecCCCCCcceeeeee-cCCCCeeEEEecCCCCCeEEEEEcCCeEE-EEEeCCCCC---CCCceeeccCCcceE
Q 021121 36 NGRVHVLDLSPAAPALTELVAF-DTADGVYDLAWSESHDSLLIAAVADGSVK-IYDTALPPT---ANPIRSLHEHTREVH 110 (317)
Q Consensus 36 ~g~i~i~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~dg~i~-v~~~~~~~~---~~~~~~~~~~~~~v~ 110 (317)
...|++|+..... ..+.+..+ .|..+|..+.+.|+..+++.++-.+=.+. ++-+.-... ........+|...|.
T Consensus 62 ~~~v~lw~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g~~~~v~ 140 (356)
T 2w18_A 62 EDVVSLWKALDAW-QWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLKSGNIKAVL 140 (356)
T ss_dssp SSEEEEEEESSSS-BEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEEEEEEEEEE
T ss_pred cceEEEcccCCCc-cceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEeCCCeEEEE
Confidence 6799999998863 34455554 46668999999998766766665443222 222222111 112222234555555
Q ss_pred EEEEecCCCCEEEEEc--CCCEEEEEEc-CCCceeEEeeccccceEEEEEec--CCCCeEEEEeCCCeEEEEeCCCCCce
Q 021121 111 SADYNPTRRDSFITSS--WDDTVKLWTV-DRPTSVRTFKEHAYCVYNATWNP--RHSDVFCSASGDCTLRIWDVREMGST 185 (317)
Q Consensus 111 ~~~~~~~~~~~l~~~~--~dg~v~iwd~-~~~~~~~~~~~~~~~v~~~~~~~--~~~~~l~~~~~dg~i~i~d~~~~~~~ 185 (317)
.+ ++++ ++.+++ .|+.|++|++ .+++.+..+..|...+..++|+| .++.+|++++.|++|++||+++++.+
T Consensus 141 ~l---~~g~-lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l 216 (356)
T 2w18_A 141 GL---TKRR-LVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLL 216 (356)
T ss_dssp EE---TTTE-EEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEE
T ss_pred ec---CCCc-EEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEE
Confidence 54 4554 555533 5999999999 45888888889999999999998 22789999999999999999999999
Q ss_pred eeeccCcc---ceEEEEecCCCCcEE------------EEEecCCcEEEEEccCCCccEEEE-----ecCCCceeEEEec
Q 021121 186 MIIPAHEF---EILACDWNKYDDCLI------------ASASVDKSIKIWDVRNYRVPIAVL-----NGHGYAVRKVKFS 245 (317)
Q Consensus 186 ~~~~~~~~---~v~~i~~~~~~~~~l------------~~~~~d~~i~v~d~~~~~~~~~~~-----~~~~~~v~~~~~~ 245 (317)
..+.+|.. .+.+++|+| ++.++ ++|+.|++|++||..+++. +..+ .+|...+.+..++
T Consensus 217 ~tL~g~~~~v~~v~~vafSp-dG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~-l~v~~~~~p~Gh~~~~lsg~~s 294 (356)
T 2w18_A 217 KKMHIDDSYQASVCHKAYSE-MGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLS-VGVMLYCLPPGQAGRFLEGDVK 294 (356)
T ss_dssp EEEECCC---CCCEEEEEEE-TTEEEEEEC------------CCEEEEEEETTTTEE-EEEEEECCCTTCCCCEEEEEEE
T ss_pred EEEcCCCcceeeeEEEEECC-CCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEE-EEEEEeeccCCCcceeEccccC
Confidence 99976543 567779999 88876 5678899999999988653 3333 3565555444444
Q ss_pred CCCCeeEEeeecCCeEEEEecccccceeeeeecccceeE-eEEEEeccCCeEEEeecCCcEEEEecC
Q 021121 246 PHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAV-GVDMSVLVEGLLASTGWDELVYVWQQG 311 (317)
Q Consensus 246 ~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~l~s~~~dg~i~~w~~~ 311 (317)
+. ++++++.|++|+|||+.+++ ++..+.+|...+. .++|+|+ +++|++|+.|++|+|||+.
T Consensus 295 --g~-~lASgS~DgTIkIWDl~tGk-~l~tL~gH~~~vvs~vafSPD-G~~LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 295 --DH-CAAAILTSGTIAIWDLLLGQ-CTALLPPVSDQHWSFVKWSGT-DSHLLAGQKDGNIFVYHYS 356 (356)
T ss_dssp --TT-EEEEEETTSCEEEEETTTCS-EEEEECCC--CCCCEEEECSS-SSEEEEECTTSCEEEEEEC
T ss_pred --CC-EEEEEcCCCcEEEEECCCCc-EEEEecCCCCCeEEEEEECCC-CCEEEEEECCCcEEEecCC
Confidence 55 79999999999999999987 6678888877665 5899999 8999999999999999963
No 124
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1.5e-32 Score=223.37 Aligned_cols=244 Identities=21% Similarity=0.360 Sum_probs=199.4
Q ss_pred cCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeE
Q 021121 6 TPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSV 85 (317)
Q Consensus 6 ~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 85 (317)
|...|.+++|+| ++.++++++. ||.|++|++..... . .....|...+.++.+. + .++++++.++.+
T Consensus 66 ~~~~V~~v~~~~--~~~~l~sgs~------Dg~v~iw~~~~~~~-~--~~~~~h~~~~~~~~~~--~-~~l~s~~~~~~~ 131 (318)
T 4ggc_A 66 PGEYISSVAWIK--EGNYLAVGTS------SAEVQLWDVQQQKR-L--RNMTSHSARVGSLSWN--S-YILSSGSRSGHI 131 (318)
T ss_dssp TTCCEEEEEECT--TSSEEEEEET------TSEEEEEETTTTEE-E--EEEECCSSCEEEEEEE--T-TEEEEEETTSEE
T ss_pred CCCeEEEEEECC--CCCEEEEEEC------CCcEEEeecCCcee-E--EEecCccceEEEeecC--C-CEEEEEecCCce
Confidence 567799999999 6677777775 99999999987642 1 2223677777766655 3 589999999999
Q ss_pred EEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCce----eEEeeccccceEEEEEecCC
Q 021121 86 KIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTS----VRTFKEHAYCVYNATWNPRH 161 (317)
Q Consensus 86 ~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~----~~~~~~~~~~v~~~~~~~~~ 161 (317)
++|+.... ......+.+|...+..+.+.+++. ++++++.||.|++||+++++. ......+.+.|.++.++|.+
T Consensus 132 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 208 (318)
T 4ggc_A 132 HHHDVRVA--EHHVATLSGHSQEVCGLRWAPDGR-HLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQ 208 (318)
T ss_dssp EEEETTSS--SCEEEEEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTS
T ss_pred EeeecCCC--ceeEEEEcCccCceEEEEEcCCCC-EEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCC
Confidence 99998754 345567788999999999999998 999999999999999987653 34555678889999999986
Q ss_pred CCeEE--EEeCCCeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEe--cCCcEEEEEccCCCccEEEEecCCC
Q 021121 162 SDVFC--SASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASAS--VDKSIKIWDVRNYRVPIAVLNGHGY 237 (317)
Q Consensus 162 ~~~l~--~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~--~d~~i~v~d~~~~~~~~~~~~~~~~ 237 (317)
..++. +++.++.|++||.+......... +...+..+.|+| .+..+++++ .|+.|++||+++++ ++..+.+|..
T Consensus 209 ~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~-~~~~v~~~~~~~-~~~~~~~~sg~~d~~i~iwd~~~~~-~~~~l~gH~~ 285 (318)
T 4ggc_A 209 SNVLATGGGTSDRHIRIWNVCSGACLSAVD-AHSQVCSILWSP-HYKELISGHGFAQNQLVIWKYPTMA-KVAELKGHTS 285 (318)
T ss_dssp TTEEEEEECTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEEET-TTTEEEEEECTTTCCEEEEETTTCC-EEEEECCCSS
T ss_pred CcEEEEEecCCCCEEEEEeccccccccccc-ceeeeeeeeecc-cccceEEEEEcCCCEEEEEECCCCc-EEEEEcCCCC
Confidence 66654 56678999999998877666554 667899999999 666666544 78999999999876 5888999999
Q ss_pred ceeEEEecCCCCeeEEeeecCCeEEEEeccccc
Q 021121 238 AVRKVKFSPHRRNLLASCSYDMTVCLWDFMVED 270 (317)
Q Consensus 238 ~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~ 270 (317)
.|++++|+|+++ +|++|+.||+|+|||+.+..
T Consensus 286 ~V~~l~~spdg~-~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 286 RVLSLTMSPDGA-TVASAAADETLRLWRCFELD 317 (318)
T ss_dssp CEEEEEECTTSS-CEEEEETTTEEEEECCSCCC
T ss_pred CEEEEEEcCCCC-EEEEEecCCeEEEEECCCCC
Confidence 999999999998 79999999999999987643
No 125
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=4.1e-34 Score=239.45 Aligned_cols=235 Identities=12% Similarity=0.104 Sum_probs=168.9
Q ss_pred CCeEEEEEecccccccCceEEEEecCCCCCcce-eee-eecCCCCeeEEEecC--------CCCCeEEEEEcCCeEEEEE
Q 021121 20 ESRLAVATAQNFGILGNGRVHVLDLSPAAPALT-ELV-AFDTADGVYDLAWSE--------SHDSLLIAAVADGSVKIYD 89 (317)
Q Consensus 20 ~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~-~~~-~~~~~~~v~~~~~~~--------~~~~~l~~~~~dg~i~v~~ 89 (317)
.+.++++++. |++|+|||......... .+. ..+|.+.|++++|+| ++ ++|++|+.|++|+|||
T Consensus 100 ~~~~las~~~------d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~-~~las~s~D~tv~~Wd 172 (393)
T 4gq1_A 100 YSLFLACVCQ------DNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAE-QVIASVGDDCTLIIWR 172 (393)
T ss_dssp EEEEEEEEET------TSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEE-EEEEEEETTSEEEEEE
T ss_pred CCCEEEEEeC------CCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCC-CEEEEEECCCeEEEEE
Confidence 3456666665 99999999987642111 111 236899999999997 55 6999999999999999
Q ss_pred eCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEe------------------------
Q 021121 90 TALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTF------------------------ 145 (317)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~------------------------ 145 (317)
+... .+...+..|..+|.+++|+|++..+|++++.||.|++||+++++.....
T Consensus 173 ~~~~---~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 249 (393)
T 4gq1_A 173 LTDE---GPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCH 249 (393)
T ss_dssp EETT---EEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC----
T ss_pred CCCC---ceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeee
Confidence 9765 5666777899999999999998668999999999999999887543322
Q ss_pred -eccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeeccCccceEEE------------------EecC-CCC
Q 021121 146 -KEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILAC------------------DWNK-YDD 205 (317)
Q Consensus 146 -~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i------------------~~~~-~~~ 205 (317)
.+|...+.++.|.+.++..+++++.|+.+++||+..++....+..+...+..+ .++| .++
T Consensus 250 ~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (393)
T 4gq1_A 250 SSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMD 329 (393)
T ss_dssp --CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTT
T ss_pred cccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCC
Confidence 24667788999985448999999999999999998776655554443333322 2332 244
Q ss_pred cEEEEEecCCcEEEEEccCCCccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecc
Q 021121 206 CLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFM 267 (317)
Q Consensus 206 ~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~ 267 (317)
.++++|+.||.|++||..+++. ......|..+|++++|+|+|+ +||+++.+| +.+|.+.
T Consensus 330 ~~~~sgs~Dg~V~lwd~~~~~~-~~~~~~~~~~V~svafspdG~-~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 330 YFATAHSQHGLIQLINTYEKDS-NSIPIQLGMPIVDFCWHQDGS-HLAIATEGS-VLLTRLM 388 (393)
T ss_dssp EEEEEETTTTEEEEEETTCTTC-CEEEEECSSCEEEEEECTTSS-EEEEEESSE-EEEEEEG
T ss_pred EEEEEECCCCEEEEEECCCCcE-EEEecCCCCcEEEEEEcCCCC-EEEEEeCCC-eEEEEEe
Confidence 5677888999999999998765 566667888999999999999 699888665 6666654
No 126
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=7.5e-31 Score=208.62 Aligned_cols=244 Identities=14% Similarity=0.133 Sum_probs=174.3
Q ss_pred cCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCc-ceeeeeecCCCCeeEEEecCCCCCeEEEEE--cC
Q 021121 6 TPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPA-LTELVAFDTADGVYDLAWSESHDSLLIAAV--AD 82 (317)
Q Consensus 6 ~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--~d 82 (317)
+..+|..+.|.|+..+.+.++.++. ..+.|+..-+.+.... .+.+..-++...|..+ +++ +++.+++ .|
T Consensus 85 ~~~~v~~~~~~~~~~~~~~~~~~~~----~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l---~~g-~lv~ss~~g~d 156 (356)
T 2w18_A 85 AEVPVLQIVPVPDVYNLVCVALGNL----EIREIRALFCSSDDESEKQVLLKSGNIKAVLGL---TKR-RLVSSSGTLSD 156 (356)
T ss_dssp CSSCEEEECCCTTCCSCEEEEECSS----SEEEEEEECC------CCEEEEEEEEEEEEEEE---TTT-EEEEEESSSTT
T ss_pred cCceeEEEEEcCcccceeeeeeccc----cccceEEEEECCCccccccEEEeCCCeEEEEec---CCC-cEEEecccCCC
Confidence 4568999999998888888887753 1223333333333111 1222222344445444 444 4555533 49
Q ss_pred CeEEEEEeCCCCCCCCceeeccCCcceEEEEEec---CCCCEEEEEcCCCEEEEEEcCCCceeEEeeccc---cceEEEE
Q 021121 83 GSVKIYDTALPPTANPIRSLHEHTREVHSADYNP---TRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHA---YCVYNAT 156 (317)
Q Consensus 83 g~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~---~~v~~~~ 156 (317)
+.|++|++... .+.+..+..|...+..++|++ ++. +|++++.|++|++||++++++++++.+|. ..+.+++
T Consensus 157 ~~V~~~~~s~d--G~~~~s~~~~~~~v~~l~fs~~~g~~~-~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~va 233 (356)
T 2w18_A 157 QQVEVMTFAED--GGGKENQFLMPPEETILTFAEVQGMQE-ALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKA 233 (356)
T ss_dssp CEEEEEEECTT--SCEEEEEEECCCSSCEEEEEEEETSTT-EEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEE
T ss_pred CcEEEEEECCC--CceeeeeccCCCceeeEEeeccCCCCc-eEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEE
Confidence 99999999642 356667778999999999998 556 99999999999999999999999998643 3677889
Q ss_pred EecCCCCeE------------EEEeCCCeEEEEeCCCCCceeee-----ccCccceEEEEecCCCCcEEEEEecCCcEEE
Q 021121 157 WNPRHSDVF------------CSASGDCTLRIWDVREMGSTMII-----PAHEFEILACDWNKYDDCLIASASVDKSIKI 219 (317)
Q Consensus 157 ~~~~~~~~l------------~~~~~dg~i~i~d~~~~~~~~~~-----~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v 219 (317)
|+|+ +.++ ++|+.|++|++||..+++.+..+ .+|...+.+..+ ++.++++++.|++|++
T Consensus 234 fSpd-G~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~---sg~~lASgS~DgTIkI 309 (356)
T 2w18_A 234 YSEM-GLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDV---KDHCAAAILTSGTIAI 309 (356)
T ss_dssp EEET-TEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEE---ETTEEEEEETTSCEEE
T ss_pred ECCC-CCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcccc---CCCEEEEEcCCCcEEE
Confidence 9998 6665 56889999999999988776554 245444443333 3678999999999999
Q ss_pred EEccCCCccEEEEecCCCcee-EEEecCCCCeeEEeeecCCeEEEEec
Q 021121 220 WDVRNYRVPIAVLNGHGYAVR-KVKFSPHRRNLLASCSYDMTVCLWDF 266 (317)
Q Consensus 220 ~d~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~l~~~~~d~~i~vwd~ 266 (317)
||+++++ .+..+.+|...+. +++|+|+++ +|++|+.|++|+|||+
T Consensus 310 WDl~tGk-~l~tL~gH~~~vvs~vafSPDG~-~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 310 WDLLLGQ-CTALLPPVSDQHWSFVKWSGTDS-HLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EETTTCS-EEEEECCC--CCCCEEEECSSSS-EEEEECTTSCEEEEEE
T ss_pred EECCCCc-EEEEecCCCCCeEEEEEECCCCC-EEEEEECCCcEEEecC
Confidence 9999977 4788888877655 589999999 7999999999999995
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.98 E-value=9.4e-30 Score=214.22 Aligned_cols=285 Identities=8% Similarity=0.048 Sum_probs=210.4
Q ss_pred cceeEEEEecCCCCeEEEEEecccccccCc----eEEEEec--CCCCCcceeeeeecCCCCeeEEEecC-----------
Q 021121 8 FNGYSVKFSPFYESRLAVATAQNFGILGNG----RVHVLDL--SPAAPALTELVAFDTADGVYDLAWSE----------- 70 (317)
Q Consensus 8 ~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g----~i~i~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~----------- 70 (317)
..+...+|++.+...++.+.-. ...+| .+++||+ .++. .+.......|...+..+++++
T Consensus 63 ~~~~~~~w~~~g~~~~~~g~~~---~~~~G~~~~~i~lwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~ 138 (415)
T 2hqs_A 63 QEVQPAAWSALGIDAVVVGQVT---PNPDGSYNVAYQLVDTGGAPGT-VLAQNSYKVNKQWLRYAGHTASDEVFEKLTGI 138 (415)
T ss_dssp GGCCHHHHHTTTCCEEEEEEEE---ECTTSCEEEEEEEEECSSSTTC-EEEEEEEEECGGGHHHHHHHHHHHHHHHHHSS
T ss_pred cCcCHHHHHhcCCCEEEEEEEE---ECCCCeEEEEEEEEeCCCCCCC-EEeeeEEEcChhHHHHHHHHHHHHHHHHHcCC
Confidence 3567788888643344343311 01267 8999999 6655 222233346777788777765
Q ss_pred ---CCCCeEEEEEcC------CeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCC---EEEEEEcCC
Q 021121 71 ---SHDSLLIAAVAD------GSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDD---TVKLWTVDR 138 (317)
Q Consensus 71 ---~~~~~l~~~~~d------g~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg---~v~iwd~~~ 138 (317)
.+ ..++.++.+ +.|++||++. .....+..|...+.+++|+|+++ .|++++.++ .|++||+++
T Consensus 139 ~~~~~-~~l~~~s~~~~~~~~~~i~i~d~~g----~~~~~l~~~~~~v~~~~~Spdg~-~la~~s~~~~~~~i~~~d~~t 212 (415)
T 2hqs_A 139 KGAFR-TRIAYVVQTNGGQFPYELRVSDYDG----YNQFVVHRSPQPLMSPAWSPDGS-KLAYVTFESGRSALVIQTLAN 212 (415)
T ss_dssp CCCTT-CEEEEEEECSSSSCCEEEEEEETTS----CSCEEEEEESSCEEEEEECTTSS-EEEEEECTTSSCEEEEEETTT
T ss_pred CCcCC-CEEEEEEecCCCCccceEEEEcCCC----CCCEEEeCCCCcceeeEEcCCCC-EEEEEEecCCCcEEEEEECCC
Confidence 14 355555554 7999999863 34566778899999999999998 888888775 999999998
Q ss_pred CceeEEeeccccceEEEEEecCCCCeEE-EEeCCCe--EEEEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEec-C
Q 021121 139 PTSVRTFKEHAYCVYNATWNPRHSDVFC-SASGDCT--LRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASV-D 214 (317)
Q Consensus 139 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~-~~~~dg~--i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~-d 214 (317)
++.. .+..+...+.+++|+|+ ++.|+ +++.++. |++||+++++. ..+..+...+.+++|+| +++.|++++. +
T Consensus 213 g~~~-~l~~~~~~~~~~~~spd-g~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~sp-dg~~l~~~s~~~ 288 (415)
T 2hqs_A 213 GAVR-QVASFPRHNGAPAFSPD-GSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFP-DSQNLAFTSDQA 288 (415)
T ss_dssp CCEE-EEECCSSCEEEEEECTT-SSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECT-TSSEEEEEECTT
T ss_pred CcEE-EeecCCCcccCEEEcCC-CCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECC-CCCEEEEEECCC
Confidence 8775 45667888999999999 66555 6766654 99999988765 56667888899999999 8988888775 4
Q ss_pred C--cEEEEEccCCCccEEEEecCCCceeEEEecCCCCeeEEeeecC---CeEEEEecccccceeeeeecccceeEeEEEE
Q 021121 215 K--SIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYD---MTVCLWDFMVEDALVGRYDHHTEFAVGVDMS 289 (317)
Q Consensus 215 ~--~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d---~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~ 289 (317)
+ .|++||+.+.+ ...+..+...+.+++|+|+++ +|++++.+ ..|.+||+.+++. ..+..+. .+.+++|+
T Consensus 289 g~~~i~~~d~~~~~--~~~l~~~~~~~~~~~~spdG~-~l~~~~~~~g~~~i~~~d~~~~~~--~~l~~~~-~~~~~~~s 362 (415)
T 2hqs_A 289 GRPQVYKVNINGGA--PQRITWEGSQNQDADVSSDGK-FMVMVSSNGGQQHIAKQDLATGGV--QVLSSTF-LDETPSLA 362 (415)
T ss_dssp SSCEEEEEETTSSC--CEECCCSSSEEEEEEECTTSS-EEEEEEECSSCEEEEEEETTTCCE--EECCCSS-SCEEEEEC
T ss_pred CCcEEEEEECCCCC--EEEEecCCCcccCeEECCCCC-EEEEEECcCCceEEEEEECCCCCE--EEecCCC-CcCCeEEc
Confidence 4 67778888755 345556777899999999999 46666553 5899999988763 3444554 78999999
Q ss_pred eccCCeEEEeecCC---cEEEEecCCC
Q 021121 290 VLVEGLLASTGWDE---LVYVWQQGMD 313 (317)
Q Consensus 290 ~~~~~~l~s~~~dg---~i~~w~~~~~ 313 (317)
|+ +++|++++.++ .|++||+...
T Consensus 363 pd-g~~l~~~s~~~~~~~l~~~d~~g~ 388 (415)
T 2hqs_A 363 PN-GTMVIYSSSQGMGSVLNLVSTDGR 388 (415)
T ss_dssp TT-SSEEEEEEEETTEEEEEEEETTSC
T ss_pred CC-CCEEEEEEcCCCccEEEEEECCCC
Confidence 99 77888777766 7999998754
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.97 E-value=1.7e-28 Score=212.65 Aligned_cols=287 Identities=13% Similarity=0.118 Sum_probs=215.3
Q ss_pred CcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecC----CCCCeEEEEE-c
Q 021121 7 PFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSE----SHDSLLIAAV-A 81 (317)
Q Consensus 7 ~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~~l~~~~-~ 81 (317)
...+..++|+| +++++++++. ++.|.+||+.... ...+..+.+...+..++|+| +++ ++++++ .
T Consensus 178 g~~~~~v~~sp--dg~~l~v~~~------d~~V~v~D~~~~t--~~~~~~i~~g~~p~~va~sp~~~~dg~-~l~v~~~~ 246 (543)
T 1nir_A 178 GYAVHISRMSA--SGRYLLVIGR------DARIDMIDLWAKE--PTKVAEIKIGIEARSVESSKFKGYEDR-YTIAGAYW 246 (543)
T ss_dssp STTEEEEEECT--TSCEEEEEET------TSEEEEEETTSSS--CEEEEEEECCSEEEEEEECCSTTCTTT-EEEEEEEE
T ss_pred CcccceEEECC--CCCEEEEECC------CCeEEEEECcCCC--CcEEEEEecCCCcceEEeCCCcCCCCC-EEEEEEcc
Confidence 34588999999 6777777765 8999999993211 23344445667789999999 984 676666 5
Q ss_pred CCeEEEEEeCCCCCCCCceeecc----------CC-cceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeE--Eeecc
Q 021121 82 DGSVKIYDTALPPTANPIRSLHE----------HT-REVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVR--TFKEH 148 (317)
Q Consensus 82 dg~i~v~~~~~~~~~~~~~~~~~----------~~-~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~--~~~~~ 148 (317)
+++|.+||..+. +++..+.. |. ..+..+.++|+++.++++...++.|.+||+.+.+.+. .+. +
T Consensus 247 ~~~v~v~D~~t~---~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~-~ 322 (543)
T 1nir_A 247 PPQFAIMDGETL---EPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG-A 322 (543)
T ss_dssp SSEEEEEETTTC---CEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE-C
T ss_pred CCeEEEEecccc---ccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec-c
Confidence 899999998765 45544433 22 3789999999888788888999999999998876544 333 4
Q ss_pred ccceEEEEEecCCCCeE-EEEeCCCeEEEEeCCCCCceeeecc----CccceEEEEecCCCCcEEEEEe-cCCcEEEEEc
Q 021121 149 AYCVYNATWNPRHSDVF-CSASGDCTLRIWDVREMGSTMIIPA----HEFEILACDWNKYDDCLIASAS-VDKSIKIWDV 222 (317)
Q Consensus 149 ~~~v~~~~~~~~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~----~~~~v~~i~~~~~~~~~l~~~~-~d~~i~v~d~ 222 (317)
...+..+.|+|+ ++++ +++..+++|.+||+.+++.+..+.. |......+ ++|..+.+++++. .|++|.+||+
T Consensus 323 ~~~~~~~~~spd-g~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~ 400 (543)
T 1nir_A 323 APFLHDGGWDSS-HRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGT 400 (543)
T ss_dssp CSSCCCEEECTT-SCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEEC
T ss_pred CcCccCceECCC-CCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEe
Confidence 566889999999 6655 4555689999999999988777763 43333333 4673477777775 5799999999
Q ss_pred cC-------CCccEEEEecCCCceeEEEecCCCCeeEEeee-------cCCeEEEEecccccceeeee--------eccc
Q 021121 223 RN-------YRVPIAVLNGHGYAVRKVKFSPHRRNLLASCS-------YDMTVCLWDFMVEDALVGRY--------DHHT 280 (317)
Q Consensus 223 ~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-------~d~~i~vwd~~~~~~~~~~~--------~~~~ 280 (317)
.+ .+ .+..+..|...+..++++|+++ .|++++ .+++|.+||+.+.+.....+ ..+.
T Consensus 401 ~~~~~~~~~~~-~v~~l~~~g~~~~~v~~~pdg~-~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~ 478 (543)
T 1nir_A 401 DPKNHPQYAWK-KVAELQGQGGGSLFIKTHPKSS-HLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGA 478 (543)
T ss_dssp CTTTCTTTBTS-EEEEEECSCSCCCCEECCTTCC-EEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSC
T ss_pred CCCCCchhcCe-EEEEEEcCCCCceEEEcCCCCC-cEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCC
Confidence 87 44 5788888988889999999999 577766 37799999999887543333 3456
Q ss_pred ceeEeEEEEeccCCeEEEe-----ecCCcEEEEecCCC
Q 021121 281 EFAVGVDMSVLVEGLLAST-----GWDELVYVWQQGMD 313 (317)
Q Consensus 281 ~~v~~~~~~~~~~~~l~s~-----~~dg~i~~w~~~~~ 313 (317)
..+..+.|+|+ ++.++.+ +.|+.|.|||..+.
T Consensus 479 ~~~~~~~~~~~-g~~~~~s~~~~~~~~~~i~v~D~~t~ 515 (543)
T 1nir_A 479 KRVVQPEYNKR-GDEVWFSVWNGKNDSSALVVVDDKTL 515 (543)
T ss_dssp CEEEEEEECSS-SSEEEEEEECCTTSCCEEEEEETTTT
T ss_pred CceEeccCCCC-CCEEEEEeecCCCCCCeEEEEECCCc
Confidence 78999999999 5555543 24799999998875
No 129
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.97 E-value=2.5e-28 Score=211.66 Aligned_cols=278 Identities=12% Similarity=0.110 Sum_probs=214.4
Q ss_pred EEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEe--C
Q 021121 14 KFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDT--A 91 (317)
Q Consensus 14 ~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~--~ 91 (317)
.|+| ++.++++... ++.|.+||..... .+..+.....+..++|+|++ ++|++++.++.|++||+ .
T Consensus 144 ~~~p--~~~~~vs~~~------d~~V~v~D~~t~~----~~~~i~~g~~~~~v~~spdg-~~l~v~~~d~~V~v~D~~~~ 210 (543)
T 1nir_A 144 DLDL--PNLFSVTLRD------AGQIALVDGDSKK----IVKVIDTGYAVHISRMSASG-RYLLVIGRDARIDMIDLWAK 210 (543)
T ss_dssp CCCG--GGEEEEEEGG------GTEEEEEETTTCC----EEEEEECSTTEEEEEECTTS-CEEEEEETTSEEEEEETTSS
T ss_pred ccCC--CCEEEEEEcC------CCeEEEEECCCce----EEEEEecCcccceEEECCCC-CEEEEECCCCeEEEEECcCC
Confidence 4888 6788888775 8999999988765 22333322338999999998 59999999999999999 4
Q ss_pred CCCCCCCceeeccCCcceEEEEEec----CCCCEEEEEc-CCCEEEEEEcCCCceeEEeecc-----------ccceEEE
Q 021121 92 LPPTANPIRSLHEHTREVHSADYNP----TRRDSFITSS-WDDTVKLWTVDRPTSVRTFKEH-----------AYCVYNA 155 (317)
Q Consensus 92 ~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~~l~~~~-~dg~v~iwd~~~~~~~~~~~~~-----------~~~v~~~ 155 (317)
+. +.+..+. +...+..++|+| +++ ++++++ .+++|.+||..+++++..+..+ ...+..+
T Consensus 211 t~---~~~~~i~-~g~~p~~va~sp~~~~dg~-~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i 285 (543)
T 1nir_A 211 EP---TKVAEIK-IGIEARSVESSKFKGYEDR-YTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAI 285 (543)
T ss_dssp SC---EEEEEEE-CCSEEEEEEECCSTTCTTT-EEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEE
T ss_pred CC---cEEEEEe-cCCCcceEEeCCCcCCCCC-EEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEE
Confidence 43 5555555 455679999999 998 777776 5899999999999988887642 2268999
Q ss_pred EEecCCCCeEEEEeCCCeEEEEeCCCCCcee--eeccCccceEEEEecCCCCcEEEEE-ecCCcEEEEEccCCCccEEEE
Q 021121 156 TWNPRHSDVFCSASGDCTLRIWDVREMGSTM--IIPAHEFEILACDWNKYDDCLIASA-SVDKSIKIWDVRNYRVPIAVL 232 (317)
Q Consensus 156 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~--~~~~~~~~v~~i~~~~~~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~ 232 (317)
.++|++..++++...++.|.+||..+.+.+. .+. +...+..+.|+| ++++++++ ..+++|.+||..+++. +..+
T Consensus 286 ~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~-~~~~~~~~~~sp-dg~~l~va~~~~~~v~v~D~~tg~l-~~~i 362 (543)
T 1nir_A 286 IASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG-AAPFLHDGGWDS-SHRYFMTAANNSNKVAVIDSKDRRL-SALV 362 (543)
T ss_dssp EECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE-CCSSCCCEEECT-TSCEEEEEEGGGTEEEEEETTTTEE-EEEE
T ss_pred EECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec-cCcCccCceECC-CCCEEEEEecCCCeEEEEECCCCeE-EEee
Confidence 9999877788888899999999998876544 333 456678899999 88866554 5688999999998763 5555
Q ss_pred ec----CCCceeEEEecCCCCeeEEeee-cCCeEEEEecccc------cceeeeeecccceeEeEEEEeccCCeEEEee-
Q 021121 233 NG----HGYAVRKVKFSPHRRNLLASCS-YDMTVCLWDFMVE------DALVGRYDHHTEFAVGVDMSVLVEGLLASTG- 300 (317)
Q Consensus 233 ~~----~~~~v~~~~~~~~~~~~l~~~~-~d~~i~vwd~~~~------~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~- 300 (317)
.. |......+ ++|++..+++++. .|++|.+||+.+. -.+++.+..|...+..+.++|+ ++.|++++
T Consensus 363 ~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pd-g~~l~v~~~ 440 (543)
T 1nir_A 363 DVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPK-SSHLYVDTT 440 (543)
T ss_dssp ECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTT-CCEEEECCT
T ss_pred ccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCC-CCcEEEecC
Confidence 53 54333333 4787555777775 6899999999872 2477888899888899999999 78888887
Q ss_pred ------cCCcEEEEecCCCC
Q 021121 301 ------WDELVYVWQQGMDP 314 (317)
Q Consensus 301 ------~dg~i~~w~~~~~~ 314 (317)
.+++|.+||+.+..
T Consensus 441 ~~~~~~~~~~v~v~d~~~~~ 460 (543)
T 1nir_A 441 FNPDARISQSVAVFDLKNLD 460 (543)
T ss_dssp TCSSHHHHTCEEEEETTCTT
T ss_pred CCCCcccCceEEEEECCCCC
Confidence 37899999998754
No 130
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.97 E-value=4.6e-28 Score=198.90 Aligned_cols=269 Identities=13% Similarity=0.121 Sum_probs=186.1
Q ss_pred CceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcC-CeEEEEEeCCC-CCCCCceeeccCCcceEEEE
Q 021121 36 NGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVAD-GSVKIYDTALP-PTANPIRSLHEHTREVHSAD 113 (317)
Q Consensus 36 ~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-g~i~v~~~~~~-~~~~~~~~~~~~~~~v~~~~ 113 (317)
++.|++|+++... ....+....+...+.+++|+|++ .+|++++.+ +.|.+|++... .....+..+..+. .+..++
T Consensus 14 ~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~spdg-~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 90 (343)
T 1ri6_A 14 SQQIHVWNLNHEG-ALTLTQVVDVPGQVQPMVVSPDK-RYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHIS 90 (343)
T ss_dssp GTEEEEEEECTTS-CEEEEEEEECSSCCCCEEECTTS-SEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEE
T ss_pred CCeEEEEEECCCC-cEEEeeeEecCCCCceEEECCCC-CEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEE
Confidence 8999999997532 24445556778889999999998 467777765 99999999722 1222333444333 788999
Q ss_pred EecCCCCEEEEEcCCCEEEEEEcC---CCceeEEeeccccceEEEEEecCCCCeEEEEe-CCCeEEEEeCCC-CCcee--
Q 021121 114 YNPTRRDSFITSSWDDTVKLWTVD---RPTSVRTFKEHAYCVYNATWNPRHSDVFCSAS-GDCTLRIWDVRE-MGSTM-- 186 (317)
Q Consensus 114 ~~~~~~~~l~~~~~dg~v~iwd~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~-~~~~~-- 186 (317)
|+|+++.+++++..++.|.+||+. ..+....+.. ...+.+++|+|+ ++.+++++ .++.|.+||+.+ ++...
T Consensus 91 ~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~d-g~~l~~~~~~~~~v~~~d~~~~~~~~~~~ 168 (343)
T 1ri6_A 91 TDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG-LDGCHSANISPD-NRTLWVPALKQDRICLFTVSDDGHLVAQD 168 (343)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECC-CTTBCCCEECTT-SSEEEEEEGGGTEEEEEEECTTSCEEEEE
T ss_pred EcCCCCEEEEEecCCCeEEEEECCCCccccccccccC-CCCceEEEECCC-CCEEEEecCCCCEEEEEEecCCCceeeec
Confidence 999998333445568999999994 3334444443 345889999999 66666665 899999999987 44322
Q ss_pred --eec-cCccceEEEEecCCCCcEEE-EEecCCcEEEEEccC--CCcc-EEEEec---C---CCceeEEEecCCCCeeEE
Q 021121 187 --IIP-AHEFEILACDWNKYDDCLIA-SASVDKSIKIWDVRN--YRVP-IAVLNG---H---GYAVRKVKFSPHRRNLLA 253 (317)
Q Consensus 187 --~~~-~~~~~v~~i~~~~~~~~~l~-~~~~d~~i~v~d~~~--~~~~-~~~~~~---~---~~~v~~~~~~~~~~~~l~ 253 (317)
... .....+..++|+| ++++++ ++..++.|.+||+.. ++.. ...... . ...+..++|+|+++.+++
T Consensus 169 ~~~~~~~~~~~~~~~~~~p-dg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v 247 (343)
T 1ri6_A 169 PAEVTTVEGAGPRHMVFHP-NEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYA 247 (343)
T ss_dssp EEEEECSTTCCEEEEEECT-TSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEE
T ss_pred ccccccCCCCCcceEEECC-CCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEE
Confidence 222 2334678899999 787655 445789999999964 2211 122221 1 235668999999986555
Q ss_pred eeecCCeEEEEeccc--cc-ceeeeeecccceeEeEEEEeccCCeEEEee-cCCcEEEEecCC
Q 021121 254 SCSYDMTVCLWDFMV--ED-ALVGRYDHHTEFAVGVDMSVLVEGLLASTG-WDELVYVWQQGM 312 (317)
Q Consensus 254 ~~~~d~~i~vwd~~~--~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~-~dg~i~~w~~~~ 312 (317)
+...++.|.+||+.. +. ..+..+..+.. +..++|+|+ +++|++++ .++.|.+|+++.
T Consensus 248 ~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~d-g~~l~~~~~~~~~v~v~~~d~ 308 (343)
T 1ri6_A 248 CDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHS-GKYLIAAGQKSHHISVYEIVG 308 (343)
T ss_dssp EETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTT-SSEEEEECTTTCEEEEEEEET
T ss_pred EecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCC-CCEEEEecCCCCeEEEEEEcC
Confidence 666899999999983 22 23334444444 889999999 66666665 689999997753
No 131
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.97 E-value=1.7e-27 Score=194.83 Aligned_cols=281 Identities=12% Similarity=0.123 Sum_probs=193.7
Q ss_pred EEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCC
Q 021121 14 KFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALP 93 (317)
Q Consensus 14 ~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~ 93 (317)
.|.++ .+.++++... ++.|.+||..... ...... .+...+ .++|+|+++.+++++..++.|.+||+..+
T Consensus 4 ~~~~~-~~~~~v~~~~------~~~v~~~d~~~~~--~~~~~~-~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~ 72 (331)
T 3u4y_A 4 MFQTT-SNFGIVVEQH------LRRISFFSTDTLE--ILNQIT-LGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLE 72 (331)
T ss_dssp ---CC-CCEEEEEEGG------GTEEEEEETTTCC--EEEEEE-CCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSS
T ss_pred eEcCC-CCEEEEEecC------CCeEEEEeCcccc--eeeeEE-ccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCC
Confidence 45554 4555565554 8999999998765 222222 234455 99999998544445555899999999865
Q ss_pred CCCCC-ceeeccCCcceEEEEEecCCCCEEEEEcCCC---EEEEEEcCCCceeEEeeccccceEEEEEecCCCCeEEEEe
Q 021121 94 PTANP-IRSLHEHTREVHSADYNPTRRDSFITSSWDD---TVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSAS 169 (317)
Q Consensus 94 ~~~~~-~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg---~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 169 (317)
+. ...+..+..+..+++|+|+++ +++++..++ .|.+||+++++.+..+..+ ..+.+++|+|++..++++..
T Consensus 73 ---~~~~~~~~~~~~~~~~~~~s~dg~-~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~ 147 (331)
T 3u4y_A 73 ---PPKVVAIQEGQSSMADVDITPDDQ-FAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAISPNGNGLILIDR 147 (331)
T ss_dssp ---SCEEEEEEECSSCCCCEEECTTSS-EEEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEECTTSSCEEEEEE
T ss_pred ---ceeEEecccCCCCccceEECCCCC-EEEEecCCCCcccEEEEECCCCCeEEEEECC-CCccceEECCCCCEEEEEec
Confidence 44 555555666666699999998 777555553 9999999999888877644 45799999999445666666
Q ss_pred CCCe-EEEEeCCCCCcee----eeccCccceEEEEecCCCCcEE-EEEecCCcEEEEEccCCCcc--EEEEecCCCceeE
Q 021121 170 GDCT-LRIWDVREMGSTM----IIPAHEFEILACDWNKYDDCLI-ASASVDKSIKIWDVRNYRVP--IAVLNGHGYAVRK 241 (317)
Q Consensus 170 ~dg~-i~i~d~~~~~~~~----~~~~~~~~v~~i~~~~~~~~~l-~~~~~d~~i~v~d~~~~~~~--~~~~~~~~~~v~~ 241 (317)
.++. |.+|++.....+. ........+..++|+| +++++ +++..++.|++||+.+++.. +..+. ....+..
T Consensus 148 ~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~-~~~~~~~ 225 (331)
T 3u4y_A 148 SSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTP-DGNFAFVANLIGNSIGILETQNPENITLLNAVG-TNNLPGT 225 (331)
T ss_dssp TTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECT-TSSEEEEEETTTTEEEEEECSSTTSCEEEEEEE-CSSCCCC
T ss_pred CCCceEEEEEECCCCcEeecCCccccCCCCccceEECC-CCCEEEEEeCCCCeEEEEECCCCcccceeeecc-CCCCCce
Confidence 7688 9999988654332 1112345578999999 88754 55556889999999876631 44444 3456789
Q ss_pred EEecCCCCeeEEeeecCCeEEEEecccccc-eeeeeecc----cc---eeEeEEEEeccCCeE-EEeecCCcEEEEecCC
Q 021121 242 VKFSPHRRNLLASCSYDMTVCLWDFMVEDA-LVGRYDHH----TE---FAVGVDMSVLVEGLL-ASTGWDELVYVWQQGM 312 (317)
Q Consensus 242 ~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~-~~~~~~~~----~~---~v~~~~~~~~~~~~l-~s~~~dg~i~~w~~~~ 312 (317)
++|+|+++.++++...++.|.+||+.+++. .+..+..+ .. ....++|+|+ +++| +++..++.|.+|++..
T Consensus 226 ~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spd-g~~l~v~~~~~~~v~v~d~~~ 304 (331)
T 3u4y_A 226 IVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKT-ETKLFISANISRELKVFTISG 304 (331)
T ss_dssp EEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTT-SSEEEEEETTTTEEEEEETTS
T ss_pred EEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCC-CCEEEEecCCCCcEEEEEecC
Confidence 999999996555555678899999988762 12222211 22 2255899999 5555 5566678999999976
Q ss_pred C
Q 021121 313 D 313 (317)
Q Consensus 313 ~ 313 (317)
.
T Consensus 305 ~ 305 (331)
T 3u4y_A 305 K 305 (331)
T ss_dssp C
T ss_pred C
Confidence 4
No 132
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.97 E-value=3.2e-27 Score=198.76 Aligned_cols=235 Identities=14% Similarity=0.078 Sum_probs=184.2
Q ss_pred ceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCC---eEEEEEeCCCCCCCCceeeccCCcceEEEE
Q 021121 37 GRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADG---SVKIYDTALPPTANPIRSLHEHTREVHSAD 113 (317)
Q Consensus 37 g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg---~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~ 113 (317)
+.|++||++... ...+ ..|...+.+++|+|++ ..|++++.++ .|++||+.++ +. ..+..|...+.+++
T Consensus 159 ~~i~i~d~~g~~--~~~l--~~~~~~v~~~~~Spdg-~~la~~s~~~~~~~i~~~d~~tg---~~-~~l~~~~~~~~~~~ 229 (415)
T 2hqs_A 159 YELRVSDYDGYN--QFVV--HRSPQPLMSPAWSPDG-SKLAYVTFESGRSALVIQTLANG---AV-RQVASFPRHNGAPA 229 (415)
T ss_dssp EEEEEEETTSCS--CEEE--EEESSCEEEEEECTTS-SEEEEEECTTSSCEEEEEETTTC---CE-EEEECCSSCEEEEE
T ss_pred ceEEEEcCCCCC--CEEE--eCCCCcceeeEEcCCC-CEEEEEEecCCCcEEEEEECCCC---cE-EEeecCCCcccCEE
Confidence 799999997543 2223 3577889999999998 5888888775 9999999865 32 34667888999999
Q ss_pred EecCCCCEEE-EEcCCC--EEEEEEcCCCceeEEeeccccceEEEEEecCCCCeEEEEeC-CC--eEEEEeCCCCCceee
Q 021121 114 YNPTRRDSFI-TSSWDD--TVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASG-DC--TLRIWDVREMGSTMI 187 (317)
Q Consensus 114 ~~~~~~~~l~-~~~~dg--~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-dg--~i~i~d~~~~~~~~~ 187 (317)
|+|+++ .|+ +++.++ .|++||+.+++. ..+..+...+.+++|+|+ ++.|++++. ++ .|++||+.+++. ..
T Consensus 230 ~spdg~-~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spd-g~~l~~~s~~~g~~~i~~~d~~~~~~-~~ 305 (415)
T 2hqs_A 230 FSPDGS-KLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPD-SQNLAFTSDQAGRPQVYKVNINGGAP-QR 305 (415)
T ss_dssp ECTTSS-EEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTT-SSEEEEEECTTSSCEEEEEETTSSCC-EE
T ss_pred EcCCCC-EEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCC-CCEEEEEECCCCCcEEEEEECCCCCE-EE
Confidence 999998 555 776655 499999988765 566678888999999999 777776665 45 688889887764 34
Q ss_pred eccCccceEEEEecCCCCcEEEEEecC---CcEEEEEccCCCccEEEEecCCCceeEEEecCCCCeeEEeeecCC---eE
Q 021121 188 IPAHEFEILACDWNKYDDCLIASASVD---KSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDM---TV 261 (317)
Q Consensus 188 ~~~~~~~v~~i~~~~~~~~~l~~~~~d---~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~---~i 261 (317)
+..+...+.+++|+| ++++|++++.+ ..|++||+.+++. ..+..+. .+.+++|+|+++ +|++++.++ .|
T Consensus 306 l~~~~~~~~~~~~sp-dG~~l~~~~~~~g~~~i~~~d~~~~~~--~~l~~~~-~~~~~~~spdg~-~l~~~s~~~~~~~l 380 (415)
T 2hqs_A 306 ITWEGSQNQDADVSS-DGKFMVMVSSNGGQQHIAKQDLATGGV--QVLSSTF-LDETPSLAPNGT-MVIYSSSQGMGSVL 380 (415)
T ss_dssp CCCSSSEEEEEEECT-TSSEEEEEEECSSCEEEEEEETTTCCE--EECCCSS-SCEEEEECTTSS-EEEEEEEETTEEEE
T ss_pred EecCCCcccCeEECC-CCCEEEEEECcCCceEEEEEECCCCCE--EEecCCC-CcCCeEEcCCCC-EEEEEEcCCCccEE
Confidence 455667889999999 89988888764 5899999988653 4555554 889999999999 566666665 79
Q ss_pred EEEecccccceeeeeecccceeEeEEEEec
Q 021121 262 CLWDFMVEDALVGRYDHHTEFAVGVDMSVL 291 (317)
Q Consensus 262 ~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~ 291 (317)
.+||+... ....+..|.+.|.+++|+|.
T Consensus 381 ~~~d~~g~--~~~~l~~~~~~v~~~~~~~~ 408 (415)
T 2hqs_A 381 NLVSTDGR--FKARLPATDGQVKFPAWSPY 408 (415)
T ss_dssp EEEETTSC--CEEECCCSSSEEEEEEECCC
T ss_pred EEEECCCC--cEEEeeCCCCCCcCCccccc
Confidence 99998754 35678889999999999996
No 133
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.97 E-value=4.7e-27 Score=193.75 Aligned_cols=280 Identities=13% Similarity=0.073 Sum_probs=202.9
Q ss_pred cCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeE
Q 021121 6 TPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSV 85 (317)
Q Consensus 6 ~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 85 (317)
....+..++|+|+ .+.++++.........++.|.+||..... ....+.....+..++|+|++..++++...++.|
T Consensus 39 ~~~~~~~~~~s~d-g~~l~~~~~~~~~~~~~~~v~~~d~~~~~----~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v 113 (353)
T 3vgz_A 39 VGKGAYEMAYSQQ-ENALWLATSQSRKLDKGGVVYRLDPVTLE----VTQAIHNDLKPFGATINNTTQTLWFGNTVNSAV 113 (353)
T ss_dssp EESSEEEEEEETT-TTEEEEEECCCTTTEESEEEEEECTTTCC----EEEEEEESSCCCSEEEETTTTEEEEEETTTTEE
T ss_pred hccCccceEECCC-CCEEEEEcCCCcCCCCCccEEEEcCCCCe----EEEEEecCCCcceEEECCCCCEEEEEecCCCEE
Confidence 4456789999995 34455544321111126799999998764 223333445688999999986456666668999
Q ss_pred EEEEeCCCCCCCCceeeccCCc---------ceEEEEEecCCCCEEEEEc--CCCEEEEEEcCCCceeEEeeccccceEE
Q 021121 86 KIYDTALPPTANPIRSLHEHTR---------EVHSADYNPTRRDSFITSS--WDDTVKLWTVDRPTSVRTFKEHAYCVYN 154 (317)
Q Consensus 86 ~v~~~~~~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~~l~~~~--~dg~v~iwd~~~~~~~~~~~~~~~~v~~ 154 (317)
.+||..++ +....+..+.. .+.+++|+|+++ .+++++ .++.|.+||+++++....+..+...+.+
T Consensus 114 ~~~d~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~ 189 (353)
T 3vgz_A 114 TAIDAKTG---EVKGRLVLDDRKRTEEVRPLQPRELVADDATN-TVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTG 189 (353)
T ss_dssp EEEETTTC---CEEEEEESCCCCCCSSCCCCEEEEEEEETTTT-EEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCC
T ss_pred EEEeCCCC---eeEEEEecCCCccccccCCCCCceEEECCCCC-EEEEEecCCCceEEEEcCCCCceEEEecCCCCccce
Confidence 99998766 44444443322 278899999998 555544 5889999999999888888756666899
Q ss_pred EEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeecc----CccceEEEEecCCCCcEEEEEe-cCCcEEEEEccCCCccE
Q 021121 155 ATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPA----HEFEILACDWNKYDDCLIASAS-VDKSIKIWDVRNYRVPI 229 (317)
Q Consensus 155 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~----~~~~v~~i~~~~~~~~~l~~~~-~d~~i~v~d~~~~~~~~ 229 (317)
++|+|+ ++.+++++.++.|.+||+.+++....+.. +...+..++|+| +++.+++++ .++.|.+||..+++. +
T Consensus 190 ~~~s~d-g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~~~~~-~ 266 (353)
T 3vgz_A 190 LALDSE-GKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDT-ARQRAFITDSKAAEVLVVDTRNGNI-L 266 (353)
T ss_dssp CEEETT-TTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEET-TTTEEEEEESSSSEEEEEETTTCCE-E
T ss_pred EEECCC-CCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECC-CCCEEEEEeCCCCEEEEEECCCCcE-E
Confidence 999999 78888888999999999999887776653 445678899999 777665555 458999999988764 4
Q ss_pred EEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEeecC
Q 021121 230 AVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWD 302 (317)
Q Consensus 230 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d 302 (317)
..+.... ...++|+|+++.++++...++.|.+||..+++ ....+.. ...+.+++|+|+ +++|+.+..+
T Consensus 267 ~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~-~~~~~~~-~~~~~~~~~s~d-g~~l~v~~~~ 334 (353)
T 3vgz_A 267 AKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYK-VVKTFDT-PTHPNSLALSAD-GKTLYVSVKQ 334 (353)
T ss_dssp EEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTTTE-EEEEEEC-CSEEEEEEECTT-SCEEEEEEEC
T ss_pred EEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCCCe-EEEEEec-CCCCCeEEEcCC-CCEEEEEEcc
Confidence 5554333 25799999999656666679999999998876 4444444 346799999999 6655554444
No 134
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.97 E-value=9.3e-28 Score=216.86 Aligned_cols=286 Identities=11% Similarity=0.103 Sum_probs=205.8
Q ss_pred CcceeEEEEecCCCCeEEEEEecccccccCc-----eEEEEecCCCCCcceeeeee-cCC--------------------
Q 021121 7 PFNGYSVKFSPFYESRLAVATAQNFGILGNG-----RVHVLDLSPAAPALTELVAF-DTA-------------------- 60 (317)
Q Consensus 7 ~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g-----~i~i~~~~~~~~~~~~~~~~-~~~-------------------- 60 (317)
...+.+++||| +++.++..+.. +| .|++||+.... ...+... .+.
T Consensus 36 ~~~~~~~~~Sp--dG~~la~~~~~-----d~~~~~~~i~~~d~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (741)
T 2ecf_A 36 GPTLMKPKVAP--DGSRVTFLRGK-----DSDRNQLDLWSYDIGSGQ--TRLLVDSKVVLPGTETLSDEEKARRERQRIA 106 (741)
T ss_dssp CCCCEEEEECT--TSSEEEEEECC-----SSCTTEEEEEEEETTTCC--EEEEECGGGTC--------------------
T ss_pred CCCCCCceEec--CCCEEEEEecc-----CCCCcccEEEEEECCCCc--eeEccchhhcccccccccchhhhhhhhhhhc
Confidence 45689999999 56655554421 55 89999998765 2222211 111
Q ss_pred --CCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCC
Q 021121 61 --DGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDR 138 (317)
Q Consensus 61 --~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~ 138 (317)
..+.+++|+||| ++|++++. +.|.+||+..+.. .....+..|...+..++|+|+|+ .|+.++ ++.|++||+.+
T Consensus 107 ~~~~v~~~~~SpDg-~~l~~~~~-~~i~~~d~~~~~~-~~~~~l~~~~~~~~~~~~SPDG~-~la~~~-~~~i~~~d~~~ 181 (741)
T 2ecf_A 107 AMTGIVDYQWSPDA-QRLLFPLG-GELYLYDLKQEGK-AAVRQLTHGEGFATDAKLSPKGG-FVSFIR-GRNLWVIDLAS 181 (741)
T ss_dssp CCEESCCCEECTTS-SEEEEEET-TEEEEEESSSCST-TSCCBCCCSSSCEEEEEECTTSS-EEEEEE-TTEEEEEETTT
T ss_pred cccCcceeEECCCC-CEEEEEeC-CcEEEEECCCCCc-ceEEEcccCCcccccccCCCCCC-EEEEEe-CCcEEEEecCC
Confidence 238899999998 57877775 8999999976410 03445666788899999999998 777776 56999999998
Q ss_pred CceeEEeeccccc----------------eEEEEEecCCCCeEEEEeCCC------------------------------
Q 021121 139 PTSVRTFKEHAYC----------------VYNATWNPRHSDVFCSASGDC------------------------------ 172 (317)
Q Consensus 139 ~~~~~~~~~~~~~----------------v~~~~~~~~~~~~l~~~~~dg------------------------------ 172 (317)
++.......+... +..++|+|+ ++.|++++.|+
T Consensus 182 g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpD-g~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~ 260 (741)
T 2ecf_A 182 GRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPD-DSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDAN 260 (741)
T ss_dssp TEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTT-SSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCC
T ss_pred CCEEEeccCCccceeccccceeeeeccccccceEECCC-CCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCC
Confidence 7665444333322 478999999 77777776655
Q ss_pred ---eEEEEeCCC-CCceeeec--cCccceEEEEecCCCCcEEEEEec-----CCcEEEEEccCCCccEEEEecCCC----
Q 021121 173 ---TLRIWDVRE-MGSTMIIP--AHEFEILACDWNKYDDCLIASASV-----DKSIKIWDVRNYRVPIAVLNGHGY---- 237 (317)
Q Consensus 173 ---~i~i~d~~~-~~~~~~~~--~~~~~v~~i~~~~~~~~~l~~~~~-----d~~i~v~d~~~~~~~~~~~~~~~~---- 237 (317)
.|++||+.+ ++...... .+...+..++| | +++.|++++. +..|++||+.+++. ...+..+..
T Consensus 261 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-p-Dg~~l~~~~~~~~~~~~~i~~~d~~~g~~-~~~~~~~~~~~~~ 337 (741)
T 2ecf_A 261 VQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-R-DPQHLSFQRQSRDQKKLDLVEVTLASNQQ-RVLAHETSPTWVP 337 (741)
T ss_dssp CEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-E-ETTEEEEEEEETTSSEEEEEEEETTTCCE-EEEEEEECSSCCC
T ss_pred CeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-C-CCCEEEEEEecccCCeEEEEEEECCCCce-EEEEEcCCCCcCC
Confidence 889999988 76554432 36778999999 9 8988887654 56799999998763 444443332
Q ss_pred ceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeE-EEEeccCCeEEEeecCC--cEEEEecCC
Q 021121 238 AVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGV-DMSVLVEGLLASTGWDE--LVYVWQQGM 312 (317)
Q Consensus 238 ~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~l~s~~~dg--~i~~w~~~~ 312 (317)
.+..++|+|+++ ++++++.||.++||.+..... ...+..|...+..+ .|+|++..++++++.++ .+++|++..
T Consensus 338 ~~~~~~~spdg~-~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~ 413 (741)
T 2ecf_A 338 LHNSLRFLDDGS-ILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPL 413 (741)
T ss_dssp CCSCCEECTTSC-EEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEET
T ss_pred cCCceEECCCCe-EEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEc
Confidence 456899999999 789999999888887763333 56677777778887 59999433445666666 899999864
No 135
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.96 E-value=2.1e-27 Score=190.76 Aligned_cols=252 Identities=17% Similarity=0.155 Sum_probs=185.7
Q ss_pred CceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCC-CCCCCCceeeccC-CcceEEEE
Q 021121 36 NGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTAL-PPTANPIRSLHEH-TREVHSAD 113 (317)
Q Consensus 36 ~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~-~~~~~~~~~~~~~-~~~v~~~~ 113 (317)
++.|++||+.... ......+...|.+++|+|++ .+|++++ ++.|.+||+.. + +.......+ ...+.+++
T Consensus 21 ~~~i~~~d~~~~~----~~~~~~~~~~v~~~~~spdg-~~l~~~~-~~~i~~~d~~~~~---~~~~~~~~~~~~~~~~~~ 91 (297)
T 2ojh_A 21 RSSIEIFNIRTRK----MRVVWQTPELFEAPNWSPDG-KYLLLNS-EGLLYRLSLAGDP---SPEKVDTGFATICNNDHG 91 (297)
T ss_dssp CEEEEEEETTTTE----EEEEEEESSCCEEEEECTTS-SEEEEEE-TTEEEEEESSSCC---SCEECCCTTCCCBCSCCE
T ss_pred ceeEEEEeCCCCc----eeeeccCCcceEeeEECCCC-CEEEEEc-CCeEEEEeCCCCC---CceEeccccccccccceE
Confidence 7899999998654 22334678889999999998 5777776 78999999986 4 344444444 46788999
Q ss_pred EecCCCCEEEEEc--CC--CEEEEEEcCCCceeEEeeccccceEEEEEecCCCCeE-EEEeCCCeEEEEeCCC-CCceee
Q 021121 114 YNPTRRDSFITSS--WD--DTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVF-CSASGDCTLRIWDVRE-MGSTMI 187 (317)
Q Consensus 114 ~~~~~~~~l~~~~--~d--g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~~~~~dg~i~i~d~~~-~~~~~~ 187 (317)
|+|+++ .+++++ .+ ..|..+++.+++ ...+..+ ..+..++|+|+ ++.+ +++..++.+++|+++. ......
T Consensus 92 ~spdg~-~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spd-g~~l~~~~~~~~~~~l~~~~~~~~~~~~ 167 (297)
T 2ojh_A 92 ISPDGA-LYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPD-GKSFTYCGIRDQVFDIYSMDIDSGVETR 167 (297)
T ss_dssp ECTTSS-EEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTT-SSEEEEEEEETTEEEEEEEETTTCCEEE
T ss_pred ECCCCC-EEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEECCC-CCEEEEEECCCCceEEEEEECCCCcceE
Confidence 999998 788777 33 445555555544 3444433 34899999999 5554 4788899999998643 234455
Q ss_pred eccCccceEEEEecCCCCcEEEEEe-cCCcEEEEEccCCCccEEEEecCCCceeEEEecCCCCeeEEeeecC--------
Q 021121 188 IPAHEFEILACDWNKYDDCLIASAS-VDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYD-------- 258 (317)
Q Consensus 188 ~~~~~~~v~~i~~~~~~~~~l~~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-------- 258 (317)
+..+...+.+++|+| +++.++.++ .++.+++|++.........+..|...+..++|+|+++. |++++.+
T Consensus 168 ~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~-l~~~~~~~~~~~~~~ 245 (297)
T 2ojh_A 168 LTHGEGRNDGPDYSP-DGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDK-VVFVSYDADVFDHPR 245 (297)
T ss_dssp CCCSSSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSE-EEEEEEETTCCSCCS
T ss_pred cccCCCccccceECC-CCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCE-EEEEEcCCCCCcccc
Confidence 666778899999999 888777665 58999999987434446777778888999999999994 6666554
Q ss_pred ---CeEEEEecccccc-eeeeeecccceeEeEEEEeccCCeEEEeecCC
Q 021121 259 ---MTVCLWDFMVEDA-LVGRYDHHTEFAVGVDMSVLVEGLLASTGWDE 303 (317)
Q Consensus 259 ---~~i~vwd~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg 303 (317)
+.|.+||+.+++. .+....+|...+..++|+|+ ++.|++++.+.
T Consensus 246 ~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spd-g~~l~~~~~~~ 293 (297)
T 2ojh_A 246 DLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPD-GDEFAYVRYFP 293 (297)
T ss_dssp SEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTT-SSEEEEEEECC
T ss_pred cCceEEEEEecCCCCceeeeccCCCCcccccceECCC-CCEEEEEEecc
Confidence 5699999988752 23344577888999999999 67777666543
No 136
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.96 E-value=1.3e-27 Score=215.25 Aligned_cols=286 Identities=9% Similarity=0.050 Sum_probs=196.8
Q ss_pred cceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCC---CeeEEEecCCCCCeEEEEEcC--
Q 021121 8 FNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTAD---GVYDLAWSESHDSLLIAAVAD-- 82 (317)
Q Consensus 8 ~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~l~~~~~d-- 82 (317)
..+.+++|+| ++.++++ +. +|.|++||...... ..+. ..+.. .|.+++|+||| ++|++++.+
T Consensus 17 ~~~~~~~~sp--dg~~~~~-~~------dg~i~~~d~~~g~~--~~~~-~~~~~~~~~v~~~~~SpDg-~~l~~~~~~~~ 83 (723)
T 1xfd_A 17 IHDPEAKWIS--DTEFIYR-EQ------KGTVRLWNVETNTS--TVLI-EGKKIESLRAIRYEISPDR-EYALFSYNVEP 83 (723)
T ss_dssp CCCCCCCBSS--SSCBCCC-CS------SSCEEEBCGGGCCC--EEEE-CTTTTTTTTCSEEEECTTS-SEEEEEESCCC
T ss_pred ccccccEEcC--CCcEEEE-eC------CCCEEEEECCCCcE--EEEe-ccccccccccceEEECCCC-CEEEEEecCcc
Confidence 3467899999 5666665 33 89999999987652 2221 12332 49999999998 588888764
Q ss_pred -------CeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeeccccce---
Q 021121 83 -------GSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCV--- 152 (317)
Q Consensus 83 -------g~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v--- 152 (317)
+.+.+||+..++. ..+.....|...+..++|+|+|+ .|+.++. +.|++||+.+++.......+...+
T Consensus 84 ~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~-~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~ 160 (723)
T 1xfd_A 84 IYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQ-QLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYN 160 (723)
T ss_dssp CSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTT-CEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEE
T ss_pred ceeecceeeEEEEECCCCce-EeccCCccccccccccEECCCCC-EEEEEEC-CeEEEEECCCCceEEEecCCCCCceEC
Confidence 7888999987622 22333334555688999999998 7777775 799999999887766555443333
Q ss_pred ---------------EEEEEecCCCCeEEEEeCCC----------------------------------eEEEEeCCCCC
Q 021121 153 ---------------YNATWNPRHSDVFCSASGDC----------------------------------TLRIWDVREMG 183 (317)
Q Consensus 153 ---------------~~~~~~~~~~~~l~~~~~dg----------------------------------~i~i~d~~~~~ 183 (317)
.+++|+|+ ++.|++++.++ .|++||+.+++
T Consensus 161 g~~~~v~~ee~~~~~~~~~~SpD-g~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~ 239 (723)
T 1xfd_A 161 GLSDWLYEEEILKTHIAHWWSPD-GTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPT 239 (723)
T ss_dssp EECCHHHHHTTSSSSEEEEECTT-SSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSC
T ss_pred cccceeEEEEeccCcceEEECCC-CCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCc
Confidence 78999999 78777776542 79999999887
Q ss_pred ceeeeccC------ccceEEEEecCCCCcEEEEEec----CCcEEEEEccCCCccEEEEe-cCCCce----eEEEecCCC
Q 021121 184 STMIIPAH------EFEILACDWNKYDDCLIASASV----DKSIKIWDVRNYRVPIAVLN-GHGYAV----RKVKFSPHR 248 (317)
Q Consensus 184 ~~~~~~~~------~~~v~~i~~~~~~~~~l~~~~~----d~~i~v~d~~~~~~~~~~~~-~~~~~v----~~~~~~~~~ 248 (317)
....+..+ ...+.+++|+| +++++++... +..|++||+.+++. ...+. .+...+ ..++|+|+|
T Consensus 240 ~~~~l~~~~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~~~~~~~~spdg 317 (723)
T 1xfd_A 240 HDLEMMPPDDPRMREYYITMVKWAT-STKVAVTWLNRAQNVSILTLCDATTGVC-TKKHEDESEAWLHRQNEEPVFSKDG 317 (723)
T ss_dssp CCEECCCCCCGGGSSEEEEEEEESS-SSEEEEEEEETTSCEEEEEEEETTTCCE-EEEEEEECSSCCCCCCCCCEECTTS
T ss_pred eeEEeeCCccCCCccceeEEEEEeC-CCeEEEEEEcCCCCeEEEEEEeCCCCcc-eEEEEeccCCEEeccCCCceEcCCC
Confidence 65555543 56789999999 9998877653 35799999988764 33332 334444 378999999
Q ss_pred CeeEEe-eecCC------eEEEEecccccc--eeeeeecccceeEe-EEEEeccCCeEEEee-cC--CcEEEEecCCC
Q 021121 249 RNLLAS-CSYDM------TVCLWDFMVEDA--LVGRYDHHTEFAVG-VDMSVLVEGLLASTG-WD--ELVYVWQQGMD 313 (317)
Q Consensus 249 ~~~l~~-~~~d~------~i~vwd~~~~~~--~~~~~~~~~~~v~~-~~~~~~~~~~l~s~~-~d--g~i~~w~~~~~ 313 (317)
+.+++. +..++ .|.+||+..+.. ....+..+...+.. ++|+|+ ++.|+..+ .+ +.+++|+++..
T Consensus 318 ~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spd-g~~l~~~~~~~~~~~~~l~~~~~~ 394 (723)
T 1xfd_A 318 RKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEK-GNKIYFLSTEDLPRRRQLYSANTV 394 (723)
T ss_dssp CSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETT-TTEEEEEESSSCTTCCEEEEECSS
T ss_pred CeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCC-CCEEEEEEcCCCCcceEEEEEeCC
Confidence 965444 55677 466677323322 12334333333444 699999 66665544 44 88999998653
No 137
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.96 E-value=5.4e-26 Score=187.15 Aligned_cols=271 Identities=10% Similarity=0.115 Sum_probs=187.1
Q ss_pred CceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEc--CCeEEEEEeCCCCCCCCceeeccCCcceEEEE
Q 021121 36 NGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVA--DGSVKIYDTALPPTANPIRSLHEHTREVHSAD 113 (317)
Q Consensus 36 ~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~--dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~ 113 (317)
++.|.+|+++.....+..+....+...+..++|+|++. +++++.. ++.|.+|++..+ ..+.+..+..+...+..++
T Consensus 15 ~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g-~~~~~~~~~~~~~~p~~~a 92 (347)
T 3hfq_A 15 SQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQ-TAHKLNTVVAPGTPPAYVA 92 (347)
T ss_dssp CCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETT-EEEEEEEEEEESCCCSEEE
T ss_pred CCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCC-cEEEeeeeecCCCCCEEEE
Confidence 56799999886554455545555667788999999984 5444443 689999999654 2234444455677888999
Q ss_pred EecCCCCEEEEEc-CCCEEEEEEcCCC-c--eeEEeec---------cccceEEEEEecCCCCeEEEEeCCCeEEEEeCC
Q 021121 114 YNPTRRDSFITSS-WDDTVKLWTVDRP-T--SVRTFKE---------HAYCVYNATWNPRHSDVFCSASGDCTLRIWDVR 180 (317)
Q Consensus 114 ~~~~~~~~l~~~~-~dg~v~iwd~~~~-~--~~~~~~~---------~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 180 (317)
|+|+++ +|++++ .++.|.+|++... . .+..+.. ....+.+++|+|+ ++++++...++.|++||+.
T Consensus 93 ~spdg~-~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spd-g~l~v~~~~~~~v~~~~~~ 170 (347)
T 3hfq_A 93 VDEARQ-LVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPD-NRLAVIDLGSDKVYVYNVS 170 (347)
T ss_dssp EETTTT-EEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTT-SCEEEEETTTTEEEEEEEC
T ss_pred ECCCCC-EEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCC-CcEEEEeCCCCEEEEEEEC
Confidence 999998 666665 7899999999633 2 2222221 1124889999999 5577777778999999998
Q ss_pred -CCCcee--eecc-CccceEEEEecCCCCcEEEE-EecCCcEEEEEccC--CCc-cEEEEecCC------CceeEEEecC
Q 021121 181 -EMGSTM--IIPA-HEFEILACDWNKYDDCLIAS-ASVDKSIKIWDVRN--YRV-PIAVLNGHG------YAVRKVKFSP 246 (317)
Q Consensus 181 -~~~~~~--~~~~-~~~~v~~i~~~~~~~~~l~~-~~~d~~i~v~d~~~--~~~-~~~~~~~~~------~~v~~~~~~~ 246 (317)
+++... .+.. ....+..++|+| +++++++ ...++.|.+|++.. ++. ......... ..+..++|+|
T Consensus 171 ~~g~~~~~~~~~~~~g~~p~~~~~sp-dg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~sp 249 (347)
T 3hfq_A 171 DAGQLSEQSVLTMEAGFGPRHLVFSP-DGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSH 249 (347)
T ss_dssp TTSCEEEEEEEECCTTCCEEEEEECT-TSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECT
T ss_pred CCCcEEEeeeEEcCCCCCCceEEECC-CCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECC
Confidence 443221 1122 233577899999 8885554 56788999999885 221 122222222 3588899999
Q ss_pred CCCeeEEeeecCCeEEEEeccccc--ceeeeeecccceeEeEEEEeccCCeEEEee-cCCcEEEEecCC
Q 021121 247 HRRNLLASCSYDMTVCLWDFMVED--ALVGRYDHHTEFAVGVDMSVLVEGLLASTG-WDELVYVWQQGM 312 (317)
Q Consensus 247 ~~~~~l~~~~~d~~i~vwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~-~dg~i~~w~~~~ 312 (317)
+|+.++++...++.|.+|++.... ..+..+..+...+..++|+|+ +++|++++ .++.|.+|+++.
T Consensus 250 dG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spd-g~~l~v~~~~~~~v~v~~~d~ 317 (347)
T 3hfq_A 250 DGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPT-EAFVVVVNQNTDNATLYARDL 317 (347)
T ss_dssp TSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTT-SSEEEEEETTTTEEEEEEECT
T ss_pred CCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCC-CCEEEEEEcCCCcEEEEEEeC
Confidence 999655677778999999987432 234455555667889999999 67666666 458999997754
No 138
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.96 E-value=1.6e-26 Score=189.27 Aligned_cols=259 Identities=9% Similarity=0.025 Sum_probs=188.4
Q ss_pred CceEEEEecCCCCCcceeeeeecCCC---CeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeecc-----CCc
Q 021121 36 NGRVHVLDLSPAAPALTELVAFDTAD---GVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHE-----HTR 107 (317)
Q Consensus 36 ~g~i~i~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~-----~~~ 107 (317)
++.|.+||..... .+..+.... .+..++|+|++..+++++..++.|.+||+.++ +....+.. |..
T Consensus 10 ~~~v~~~d~~~~~----~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~---~~~~~~~~~~~~~~~~ 82 (337)
T 1pby_B 10 PDKLVVIDTEKMA----VDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTG---ETLGRIDLSTPEERVK 82 (337)
T ss_dssp TTEEEEEETTTTE----EEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTC---CEEEEEECCBTTEEEE
T ss_pred CCeEEEEECCCCc----EEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCC---CeEeeEEcCCcccccc
Confidence 8999999997654 233333333 58899999998655566667899999998765 44433332 122
Q ss_pred ceEEEEEecCCCCEEEEEc------------CCCEEEEEEcCCCceeEEeeccccceEEEEEecCCCCeEEEEeCCCeEE
Q 021121 108 EVHSADYNPTRRDSFITSS------------WDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLR 175 (317)
Q Consensus 108 ~v~~~~~~~~~~~~l~~~~------------~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 175 (317)
.+..++|+|+++ .+++++ .++.|.+||+.+++....+.. ...+.+++|+|+ ++.++++ ++.|.
T Consensus 83 ~~~~~~~s~dg~-~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~d-g~~l~~~--~~~i~ 157 (337)
T 1pby_B 83 SLFGAALSPDGK-TLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARD-GSKLYGL--GRDLH 157 (337)
T ss_dssp CTTCEEECTTSS-EEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTT-SSCEEEE--SSSEE
T ss_pred cccceEECCCCC-EEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCC-CCEEEEe--CCeEE
Confidence 577899999998 677765 579999999998888777764 456888999999 6666666 68899
Q ss_pred EEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEecC-C-----------------------cEEEEEccCCCccEEE
Q 021121 176 IWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVD-K-----------------------SIKIWDVRNYRVPIAV 231 (317)
Q Consensus 176 i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d-~-----------------------~i~v~d~~~~~~~~~~ 231 (317)
+||+.+++....+..+.. ...+.|+| ++..++..+.. + .|.+||+.+.+.....
T Consensus 158 ~~d~~~~~~~~~~~~~~~-~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~ 235 (337)
T 1pby_B 158 VMDPEAGTLVEDKPIQSW-EAETYAQP-DVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMRE 235 (337)
T ss_dssp EEETTTTEEEEEECSTTT-TTTTBCCC-BCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEE
T ss_pred EEECCCCcEeeeeecccc-CCCceeCC-CccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEee
Confidence 999998887766654331 11347788 66655444322 2 4689999987653334
Q ss_pred EecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEeecCCcEEEEecC
Q 021121 232 LNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQG 311 (317)
Q Consensus 232 ~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~ 311 (317)
+..+...+.+++|+|+++ +++++ ++.|.+||+.+++ ....+.. ...+.+++|+|+ +++|++++.++.|++||+.
T Consensus 236 ~~~~~~~~~~~~~s~dg~-~l~~~--~~~v~~~d~~~~~-~~~~~~~-~~~~~~~~~s~d-g~~l~~~~~~~~i~v~d~~ 309 (337)
T 1pby_B 236 VRIMDVFYFSTAVNPAKT-RAFGA--YNVLESFDLEKNA-SIKRVPL-PHSYYSVNVSTD-GSTVWLGGALGDLAAYDAE 309 (337)
T ss_dssp EEECSSCEEEEEECTTSS-EEEEE--ESEEEEEETTTTE-EEEEEEC-SSCCCEEEECTT-SCEEEEESBSSEEEEEETT
T ss_pred cCCCCCceeeEEECCCCC-EEEEe--CCeEEEEECCCCc-CcceecC-CCceeeEEECCC-CCEEEEEcCCCcEEEEECc
Confidence 455667788999999998 46666 6899999998876 3344443 345789999999 6778888889999999997
Q ss_pred CCC
Q 021121 312 MDP 314 (317)
Q Consensus 312 ~~~ 314 (317)
+..
T Consensus 310 ~~~ 312 (337)
T 1pby_B 310 TLE 312 (337)
T ss_dssp TCC
T ss_pred CCc
Confidence 653
No 139
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.96 E-value=3.2e-26 Score=205.76 Aligned_cols=281 Identities=12% Similarity=0.095 Sum_probs=200.6
Q ss_pred cceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeEEE
Q 021121 8 FNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKI 87 (317)
Q Consensus 8 ~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v 87 (317)
..|.+++||| ++.++++. ++.|++||+.... . .....+...+.+++|+|+| +.|+.+ .++.|.+
T Consensus 82 ~~v~~~~~sp--d~~~~~~~--------~~~i~~~d~~~~~--~--~~l~~~~~~~~~~~~SpdG-~~la~~-~~~~i~v 145 (706)
T 2z3z_A 82 FPSFRTLDAG--RGLVVLFT--------QGGLVGFDMLARK--V--TYLFDTNEETASLDFSPVG-DRVAYV-RNHNLYI 145 (706)
T ss_dssp CCCEEEEETT--TTEEEEEE--------TTEEEEEETTTTE--E--EEEECCTTCCTTCEECTTS-SEEEEE-ETTEEEE
T ss_pred cCceeEEECC--CCeEEEEE--------CCEEEEEECCCCc--e--EEccCCcccccCCcCCCCC-CEEEEE-ECCeEEE
Confidence 5699999999 46666653 6799999997653 2 2233566779999999998 477774 6899999
Q ss_pred EEeCC-----CCCCCCceeeccCCcc--------------eEEEEEecCCCCEEEEEc----------------------
Q 021121 88 YDTAL-----PPTANPIRSLHEHTRE--------------VHSADYNPTRRDSFITSS---------------------- 126 (317)
Q Consensus 88 ~~~~~-----~~~~~~~~~~~~~~~~--------------v~~~~~~~~~~~~l~~~~---------------------- 126 (317)
|++.. + +.......+... +.++.|+|||+ .|++++
T Consensus 146 ~~~~~~~~~~g---~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~-~la~~~~d~~~~~~~~~~~~~~~~~~~~ 221 (706)
T 2z3z_A 146 ARGGKLGEGMS---RAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGS-CLAFYRMDQSMVKPTPIVDYHPLEAESK 221 (706)
T ss_dssp EECBCTTSCCC---CCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSS-EEEEEEEECTTSCCEEEEECCSSSCEEE
T ss_pred EecCcccccCC---CcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCC-EEEEEEECCCCCceEEeeccCCCCCceE
Confidence 99986 4 233222222222 57899999998 777776
Q ss_pred -----------CCCEEEEEEcCCCceeEEee--ccccceEEEEEecCCCCeEEEEeCCC-----eEEEEeCCCCCceeee
Q 021121 127 -----------WDDTVKLWTVDRPTSVRTFK--EHAYCVYNATWNPRHSDVFCSASGDC-----TLRIWDVREMGSTMII 188 (317)
Q Consensus 127 -----------~dg~v~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~ 188 (317)
.+..|.+||+.+++...... .+...+.+++|+|+ ++.+++++.++ .|++||+.+++....+
T Consensus 222 ~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spd-g~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~ 300 (706)
T 2z3z_A 222 PLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPD-ENILYVAEVNRAQNECKVNAYDAETGRFVRTL 300 (706)
T ss_dssp EECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTT-SSEEEEEEECTTSCEEEEEEEETTTCCEEEEE
T ss_pred EeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECC-CCEEEEEEeCCCCCeeEEEEEECCCCceeeEE
Confidence 45789999999887544332 45677999999999 78777776665 8999999988443333
Q ss_pred c--cCcc---ceEEEEecC-CCCcEEEEEecCCcEEEEEccCCCccEEEEecCCCceeE-EEecCCCCeeEEeeecCC--
Q 021121 189 P--AHEF---EILACDWNK-YDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRK-VKFSPHRRNLLASCSYDM-- 259 (317)
Q Consensus 189 ~--~~~~---~v~~i~~~~-~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~l~~~~~d~-- 259 (317)
. .+.. .+.+++|+| .++++++++..++.+++|++.........+..+...+.. ++|+|+++.++++++.++
T Consensus 301 ~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~ 380 (706)
T 2z3z_A 301 FVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPL 380 (706)
T ss_dssp EEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTT
T ss_pred EEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCc
Confidence 2 1221 246789998 256788899899999999887333346677777777876 799999996666666655
Q ss_pred --eEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEe-ecC---CcEEEEecCCC
Q 021121 260 --TVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLAST-GWD---ELVYVWQQGMD 313 (317)
Q Consensus 260 --~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~-~~d---g~i~~w~~~~~ 313 (317)
.|..||+.+++ ...+. +...+..++|+|+ +++|+.. +.+ +.|++||+...
T Consensus 381 ~~~l~~~d~~~~~--~~~l~-~~~~~~~~~~spd-g~~l~~~~~~~~~p~~i~l~d~~~~ 436 (706)
T 2z3z_A 381 ERHFYCIDIKGGK--TKDLT-PESGMHRTQLSPD-GSAIIDIFQSPTVPRKVTVTNIGKG 436 (706)
T ss_dssp CBEEEEEETTCCC--CEESC-CSSSEEEEEECTT-SSEEEEEEECSSCSCEEEEEESSSC
T ss_pred eEEEEEEEcCCCC--ceecc-CCCceEEEEECCC-CCEEEEEecCCCCCcEEEEEECCCC
Confidence 66667766654 22333 5667899999999 5666554 333 56999998764
No 140
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.96 E-value=6.8e-26 Score=185.94 Aligned_cols=274 Identities=13% Similarity=0.163 Sum_probs=180.5
Q ss_pred eecCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEE-cC
Q 021121 4 FKTPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAV-AD 82 (317)
Q Consensus 4 ~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d 82 (317)
+.+...+.+++|+| ++..++++... ++.|.+|+++........+........+..++|+|++. ++++++ .+
T Consensus 34 ~~~~~~~~~~~~sp--dg~~l~~~~~~-----~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-~l~~~~~~~ 105 (343)
T 1ri6_A 34 VDVPGQVQPMVVSP--DKRYLYVGVRP-----EFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQ-FVFVGSYNA 105 (343)
T ss_dssp EECSSCCCCEEECT--TSSEEEEEETT-----TTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSS-EEEEEETTT
T ss_pred EecCCCCceEEECC--CCCEEEEeecC-----CCeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCC-EEEEEecCC
Confidence 34566788999999 55544444431 48999999984332344444444445889999999985 555544 58
Q ss_pred CeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEc-CCCEEEEEEcCC-CceeE----Eeec-cccceEEE
Q 021121 83 GSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSS-WDDTVKLWTVDR-PTSVR----TFKE-HAYCVYNA 155 (317)
Q Consensus 83 g~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~dg~v~iwd~~~-~~~~~----~~~~-~~~~v~~~ 155 (317)
+.|.+||+..+........+.. ...+.+++|+|+++ .+++++ .++.|.+||+.+ ++... .+.. ....+..+
T Consensus 106 ~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~-~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (343)
T 1ri6_A 106 GNVSVTRLEDGLPVGVVDVVEG-LDGCHSANISPDNR-TLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHM 183 (343)
T ss_dssp TEEEEEEEETTEEEEEEEEECC-CTTBCCCEECTTSS-EEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEE
T ss_pred CeEEEEECCCCccccccccccC-CCCceEEEECCCCC-EEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceE
Confidence 8999999952211233333333 34688999999998 566555 899999999987 54432 2222 33478899
Q ss_pred EEecCCCCe-EEEEeCCCeEEEEeCCC--CCc--eeeec---cC---ccceEEEEecCCCCcEEE-EEecCCcEEEEEcc
Q 021121 156 TWNPRHSDV-FCSASGDCTLRIWDVRE--MGS--TMIIP---AH---EFEILACDWNKYDDCLIA-SASVDKSIKIWDVR 223 (317)
Q Consensus 156 ~~~~~~~~~-l~~~~~dg~i~i~d~~~--~~~--~~~~~---~~---~~~v~~i~~~~~~~~~l~-~~~~d~~i~v~d~~ 223 (317)
+|+|+ ++. ++++..++.|.+||++. ++. ...+. .. ...+..++|+| ++++++ ++..++.|.+||+.
T Consensus 184 ~~~pd-g~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~-dg~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 184 VFHPN-EQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITP-DGRHLYACDRTASLITVFSVS 261 (343)
T ss_dssp EECTT-SSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECT-TSSEEEEEETTTTEEEEEEEC
T ss_pred EECCC-CCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECC-CCCEEEEEecCCCEEEEEEEc
Confidence 99999 664 45555899999999964 332 12221 11 23466899999 777666 55578999999998
Q ss_pred C--CC-ccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecc--ccc-ceeeeeecccceeEeEEEEec
Q 021121 224 N--YR-VPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFM--VED-ALVGRYDHHTEFAVGVDMSVL 291 (317)
Q Consensus 224 ~--~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~--~~~-~~~~~~~~~~~~v~~~~~~~~ 291 (317)
. .. ..+..+..+.. +..++|+|+++.+++++..++.|.+|++. +++ ..+..+.. .....+++|.|+
T Consensus 262 ~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~-g~~p~~i~~~~~ 333 (343)
T 1ri6_A 262 EDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAV-GQGPMWVVVNAH 333 (343)
T ss_dssp TTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEEC-SSSCCEEEEEEE
T ss_pred CCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEcccccc-CCCCeeEEEEcc
Confidence 3 22 22334444444 88999999999544444478999999654 433 22333333 245677888886
No 141
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.95 E-value=3.6e-26 Score=206.48 Aligned_cols=281 Identities=7% Similarity=0.056 Sum_probs=201.0
Q ss_pred ceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCC-cceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeEEE
Q 021121 9 NGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAP-ALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKI 87 (317)
Q Consensus 9 ~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v 87 (317)
.+.+++||| +++.++.+. ++.|++||+..... .... ...+...+..++|+||| +.|+.++ ++.|.+
T Consensus 110 ~v~~~~~Sp--Dg~~l~~~~-------~~~i~~~d~~~~~~~~~~~--l~~~~~~~~~~~~SPDG-~~la~~~-~~~i~~ 176 (741)
T 2ecf_A 110 GIVDYQWSP--DAQRLLFPL-------GGELYLYDLKQEGKAAVRQ--LTHGEGFATDAKLSPKG-GFVSFIR-GRNLWV 176 (741)
T ss_dssp ESCCCEECT--TSSEEEEEE-------TTEEEEEESSSCSTTSCCB--CCCSSSCEEEEEECTTS-SEEEEEE-TTEEEE
T ss_pred CcceeEECC--CCCEEEEEe-------CCcEEEEECCCCCcceEEE--cccCCcccccccCCCCC-CEEEEEe-CCcEEE
Confidence 478999999 666666665 47999999987610 1222 22566789999999998 5777776 568999
Q ss_pred EEeCCCCCCCCceeeccCCc----------------ceEEEEEecCCCCEEEEEcCCC----------------------
Q 021121 88 YDTALPPTANPIRSLHEHTR----------------EVHSADYNPTRRDSFITSSWDD---------------------- 129 (317)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~----------------~v~~~~~~~~~~~~l~~~~~dg---------------------- 129 (317)
||+..+ +.......+.. .+..+.|+|||+ .|++++.|+
T Consensus 177 ~d~~~g---~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~-~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~ 252 (741)
T 2ecf_A 177 IDLASG---RQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDS-AIAYARIDESPVPVQKRYEVYADRTDVIEQR 252 (741)
T ss_dssp EETTTT---EEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSS-CEEEEEEECTTSCEEEEEEECSSCEEEEEEE
T ss_pred EecCCC---CEEEeccCCccceeccccceeeeeccccccceEECCCCC-EEEEEEEcCCCCceEecCCCCCCcccceEee
Confidence 998764 22222222222 147799999998 777776554
Q ss_pred -----------EEEEEEcCC-CceeEEee--ccccceEEEEEecCCCCeEEEEeC-----CCeEEEEeCCCCCceeeecc
Q 021121 130 -----------TVKLWTVDR-PTSVRTFK--EHAYCVYNATWNPRHSDVFCSASG-----DCTLRIWDVREMGSTMIIPA 190 (317)
Q Consensus 130 -----------~v~iwd~~~-~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~-----dg~i~i~d~~~~~~~~~~~~ 190 (317)
.|.+||+.+ ++...... .+...+..++| |+ ++.|++++. +..|++||+.+++....+..
T Consensus 253 ~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pD-g~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~ 330 (741)
T 2ecf_A 253 YPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RD-PQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHE 330 (741)
T ss_dssp CCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EE-TTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEE
T ss_pred cCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CC-CCEEEEEEecccCCeEEEEEEECCCCceEEEEEc
Confidence 889999988 76554432 36778999999 99 777665543 57899999999887666654
Q ss_pred Ccc----ceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEecCCCceeEE-EecCCCCeeEEeeecCC--eEEE
Q 021121 191 HEF----EILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKV-KFSPHRRNLLASCSYDM--TVCL 263 (317)
Q Consensus 191 ~~~----~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~l~~~~~d~--~i~v 263 (317)
+.. .+..++|+| +++++++++.++.+++|.+..... ...+..+...+..+ .|+|+++.++++++.++ .++|
T Consensus 331 ~~~~~~~~~~~~~~sp-dg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l 408 (741)
T 2ecf_A 331 TSPTWVPLHNSLRFLD-DGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQI 408 (741)
T ss_dssp ECSSCCCCCSCCEECT-TSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEE
T ss_pred CCCCcCCcCCceEECC-CCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEE
Confidence 433 356899999 888999999999888887763333 66777777788887 59999986566666666 8999
Q ss_pred EecccccceeeeeecccceeEeEEEEeccCCeEEEe-ecC---CcEEEEecCC
Q 021121 264 WDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLAST-GWD---ELVYVWQQGM 312 (317)
Q Consensus 264 wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~-~~d---g~i~~w~~~~ 312 (317)
|++.........+.. ...+..++|+|+ ++.|+.. +.. ..+.+|+...
T Consensus 409 ~~~~~~g~~~~~l~~-~~~~~~~~~spd-g~~l~~~~~~~~~p~~~~l~~~~~ 459 (741)
T 2ecf_A 409 YAVPLQGGQPQRLSK-APGMHSASFARN-ASVYVDSWSNNSTPPQIELFRANG 459 (741)
T ss_dssp EEEETTCCCCEECCC-SCSEEEEEECTT-SSEEEEEEEETTEEEEEEEEETTS
T ss_pred EEEEcCCCCeeeccc-CCCceEEEECCC-CCEEEEEecCCCCCCeEEEEEcCC
Confidence 998753333344444 556789999999 5555443 332 4688888643
No 142
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.95 E-value=1.1e-25 Score=190.15 Aligned_cols=246 Identities=12% Similarity=0.092 Sum_probs=167.9
Q ss_pred cceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCC---------Cc---ceeeeeecCCCCeeEEEecCCCCCe
Q 021121 8 FNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAA---------PA---LTELVAFDTADGVYDLAWSESHDSL 75 (317)
Q Consensus 8 ~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~---------~~---~~~~~~~~~~~~v~~~~~~~~~~~~ 75 (317)
..+..++++|. +.++++++. +| +++|+..... .. ........+...|.+++|+|++ .+
T Consensus 37 ~~~n~lavs~~--~~~l~~~~~------dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg-~~ 106 (434)
T 2oit_A 37 ERSSLLAVSNK--YGLVFAGGA------SG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDN-LT 106 (434)
T ss_dssp SCCBCEEEETT--TTEEEEEET------TE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTS-CE
T ss_pred CCccEEEEecC--CCEEEEECC------CE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCC-CE
Confidence 35788999994 444444443 55 8888764210 00 0111223566789999999998 57
Q ss_pred EE----EEEcCCeEEEEEeCCC-----CCCC---CceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeE
Q 021121 76 LI----AAVADGSVKIYDTALP-----PTAN---PIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVR 143 (317)
Q Consensus 76 l~----~~~~dg~i~v~~~~~~-----~~~~---~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~ 143 (317)
|+ +|+.|+.|++||+... ...+ ....+.+|...|.+++|+|+...+|++++.||.|++||++++....
T Consensus 107 lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~ 186 (434)
T 2oit_A 107 LSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVC 186 (434)
T ss_dssp EEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEE
T ss_pred EEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCccee
Confidence 77 7788999999998653 1111 2345667999999999999855599999999999999999987776
Q ss_pred EeeccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeeccC-------ccceEEEEecCCCCcEEEEE-ecCC
Q 021121 144 TFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAH-------EFEILACDWNKYDDCLIASA-SVDK 215 (317)
Q Consensus 144 ~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-------~~~v~~i~~~~~~~~~l~~~-~~d~ 215 (317)
....|...|.+++|+|+ +++|++|+.||.|++||++ ++....+..+ ...+.+++|++ +..++++. ..+|
T Consensus 187 ~~~~~~~~v~~v~wspd-g~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~-~~~~l~~~~~~dg 263 (434)
T 2oit_A 187 ATLPSTVAVTSVCWSPK-GKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIG-TYVFAIVYAAADG 263 (434)
T ss_dssp EEECGGGCEEEEEECTT-SSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEE-TTEEEEEEEETTC
T ss_pred eccCCCCceeEEEEcCC-CCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEec-CceEEEEEccCCC
Confidence 67778899999999999 8999999999999999998 5555444332 33799999998 77666543 3343
Q ss_pred ------cEEEEEccCCCc----cEEEEe-------cCCCceeEEEecCCCCeeEEeeecCCeEEEEec
Q 021121 216 ------SIKIWDVRNYRV----PIAVLN-------GHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDF 266 (317)
Q Consensus 216 ------~i~v~d~~~~~~----~~~~~~-------~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~ 266 (317)
.+++|++++.+. ....+. +...+-..+.+-++.+.++++.+..+.|.+...
T Consensus 264 ~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv~vl~~ 331 (434)
T 2oit_A 264 TLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSILAR 331 (434)
T ss_dssp CSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBCEEEEE
T ss_pred ccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCceeEEEe
Confidence 389999986531 111111 111222233444666644555545555555553
No 143
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.95 E-value=8.5e-26 Score=198.57 Aligned_cols=274 Identities=11% Similarity=0.053 Sum_probs=197.1
Q ss_pred CcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCC-CCeeEEEecCCCCCeEEEEEc---C
Q 021121 7 PFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTA-DGVYDLAWSESHDSLLIAAVA---D 82 (317)
Q Consensus 7 ~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~~~~~---d 82 (317)
..+|++++|+| +++.++..+. .+|.++||+++.+. . .....+. ..+..++|+|+ .++++++. +
T Consensus 21 ~~~~~~~~~~~--DG~~la~~s~-----~~g~~~lw~~~~g~--~--~~lt~~~~~~~~~~~~spd--~~l~~~~~~~g~ 87 (582)
T 3o4h_A 21 AVEKYSLQGVV--DGDKLLVVGF-----SEGSVNAYLYDGGE--T--VKLNREPINSVLDPHYGVG--RVILVRDVSKGA 87 (582)
T ss_dssp HSCEEEEEEEE--TTTEEEEEEE-----ETTEEEEEEEETTE--E--EECCSSCCSEECEECTTCS--EEEEEEECSTTS
T ss_pred ccchheeecCC--CCCeEEEEEc-----cCCceeEEEEcCCC--c--EeeecccccccccccCCCC--eEEEEeccCCCC
Confidence 45799999999 4554444432 18999999985432 2 2222444 57999999998 47777765 4
Q ss_pred CeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeeccccceEEEEEecCCC
Q 021121 83 GSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHS 162 (317)
Q Consensus 83 g~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 162 (317)
...++|.+......... .+.. ...+...+|+|+++..+++.+.++.+.+||+++++.......+ . .+++|+|+ +
T Consensus 88 ~~~~l~~~~~~~~g~~~-~l~~-~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~-~--~~~~~spD-G 161 (582)
T 3o4h_A 88 EQHALFKVNTSRPGEEQ-RLEA-VKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLP-G--FGFVSDIR-G 161 (582)
T ss_dssp CCEEEEEEETTSTTCCE-ECTT-SCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEES-S--CEEEEEEE-T
T ss_pred cceEEEEEeccCCCccc-cccC-CCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCC-C--ceEEECCC-C
Confidence 56777776541111222 2222 2234466889988755555555556669999988765544433 2 88999999 8
Q ss_pred CeEEEEeCC----CeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEecCC--cEEEEEccCCCccEEEEecCC
Q 021121 163 DVFCSASGD----CTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDK--SIKIWDVRNYRVPIAVLNGHG 236 (317)
Q Consensus 163 ~~l~~~~~d----g~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~--~i~v~d~~~~~~~~~~~~~~~ 236 (317)
+.+++++.+ +.|++||+.+++.. .+..+...+..++|+| +++.|+++..++ .|++||+.+++. . .+..|.
T Consensus 162 ~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~i~~~d~~~~~~-~-~~~~~~ 237 (582)
T 3o4h_A 162 DLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISP-GMKVTAGLETAREARLVTVDPRDGSV-E-DLELPS 237 (582)
T ss_dssp TEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECT-TSCEEEEEECSSCEEEEEECTTTCCE-E-ECCCSC
T ss_pred CEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECC-CCCEEEEccCCCeeEEEEEcCCCCcE-E-EccCCC
Confidence 888877776 78999999887654 5667888899999999 999999888888 899999988664 3 666777
Q ss_pred CceeEEE--------ecCCCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEeecCC---cE
Q 021121 237 YAVRKVK--------FSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDE---LV 305 (317)
Q Consensus 237 ~~v~~~~--------~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg---~i 305 (317)
..+..++ |+|+|. ++++++.++.+++|++ ++ ... ...+.+.+++|+ + +.++++++.+. .+
T Consensus 238 ~~~~~~~~~~~~~~~~spdg~-~~~~~~~~g~~~l~~~--g~-~~~---~~~~~v~~~~~s-d-g~~l~~~s~~~~p~~l 308 (582)
T 3o4h_A 238 KDFSSYRPTAITWLGYLPDGR-LAVVARREGRSAVFID--GE-RVE---APQGNHGRVVLW-R-GKLVTSHTSLSTPPRI 308 (582)
T ss_dssp SHHHHHCCSEEEEEEECTTSC-EEEEEEETTEEEEEET--TE-EEC---CCSSEEEEEEEE-T-TEEEEEEEETTEEEEE
T ss_pred cChhhhhhccccceeEcCCCc-EEEEEEcCCcEEEEEE--CC-eec---cCCCceEEEEec-C-CEEEEEEcCCCCCCeE
Confidence 7777777 999995 8999999999999999 43 222 334678899999 6 78888877764 46
Q ss_pred EEEecCC
Q 021121 306 YVWQQGM 312 (317)
Q Consensus 306 ~~w~~~~ 312 (317)
.+|+...
T Consensus 309 ~~~d~~~ 315 (582)
T 3o4h_A 309 VSLPSGE 315 (582)
T ss_dssp EEETTCC
T ss_pred EEEcCCC
Confidence 6666543
No 144
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.95 E-value=1.4e-25 Score=189.40 Aligned_cols=203 Identities=15% Similarity=0.143 Sum_probs=155.6
Q ss_pred CCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCC-----C--CCce-----eeccCCcceEEEEEecCCCCEEE----E
Q 021121 61 DGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPT-----A--NPIR-----SLHEHTREVHSADYNPTRRDSFI----T 124 (317)
Q Consensus 61 ~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~-----~--~~~~-----~~~~~~~~v~~~~~~~~~~~~l~----~ 124 (317)
..++.+++++++ .++++++.++ +++|+...... . .... ....+...|.+++|+|+++ +|+ +
T Consensus 37 ~~~n~lavs~~~-~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~-~lav~~~s 113 (434)
T 2oit_A 37 ERSSLLAVSNKY-GLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNL-TLSACMMS 113 (434)
T ss_dssp SCCBCEEEETTT-TEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSC-EEEEEEEE
T ss_pred CCccEEEEecCC-CEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCC-EEEEEEec
Confidence 357899999987 5888888887 89987542100 0 0111 1123567899999999998 777 7
Q ss_pred EcCCCEEEEEEcCCC--------ce---eEEeeccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeeccCcc
Q 021121 125 SSWDDTVKLWTVDRP--------TS---VRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEF 193 (317)
Q Consensus 125 ~~~dg~v~iwd~~~~--------~~---~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 193 (317)
++.|+.|++||++++ +. ...+.+|...|.+++|+|+++++|++++.||+|++||++++........|..
T Consensus 114 gs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~ 193 (434)
T 2oit_A 114 SEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTV 193 (434)
T ss_dssp TTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGG
T ss_pred cCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCC
Confidence 889999999998764 22 3445568999999999998788999999999999999998866666667888
Q ss_pred ceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEecC-------CCceeEEEecCCCCeeEEeeecCC------e
Q 021121 194 EILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGH-------GYAVRKVKFSPHRRNLLASCSYDM------T 260 (317)
Q Consensus 194 ~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~l~~~~~d~------~ 260 (317)
.+.+++|+| ++++|++|+.||.|++||.+ .+ ....+..| ...|.+++|++++..+++....+| .
T Consensus 194 ~v~~v~wsp-dg~~lasgs~dg~v~iwd~~-~~-~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~ 270 (434)
T 2oit_A 194 AVTSVCWSP-KGKQLAVGKQNGTVVQYLPT-LQ-EKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPD 270 (434)
T ss_dssp CEEEEEECT-TSSCEEEEETTSCEEEECTT-CC-EEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCE
T ss_pred ceeEEEEcC-CCCEEEEEcCCCcEEEEccC-Cc-ccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCc
Confidence 999999999 89999999999999999998 33 23444333 338999999998874333444443 3
Q ss_pred EEEEecccc
Q 021121 261 VCLWDFMVE 269 (317)
Q Consensus 261 i~vwd~~~~ 269 (317)
+++|+++..
T Consensus 271 v~i~~l~~~ 279 (434)
T 2oit_A 271 VVMALLPKK 279 (434)
T ss_dssp EEEEECCCT
T ss_pred eEEEEeccC
Confidence 899999865
No 145
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.95 E-value=1.4e-24 Score=178.88 Aligned_cols=245 Identities=10% Similarity=0.080 Sum_probs=185.1
Q ss_pred cCCCCeeEEEecCCCCCeEEEEEc-------CCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCE
Q 021121 58 DTADGVYDLAWSESHDSLLIAAVA-------DGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDT 130 (317)
Q Consensus 58 ~~~~~v~~~~~~~~~~~~l~~~~~-------dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 130 (317)
.....+..++|+|+++ .+++++. ++.|.+||..+. +....+.. ...+..++|+|+++.++++...++.
T Consensus 38 ~~~~~~~~~~~s~dg~-~l~~~~~~~~~~~~~~~v~~~d~~~~---~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~ 112 (353)
T 3vgz_A 38 AVGKGAYEMAYSQQEN-ALWLATSQSRKLDKGGVVYRLDPVTL---EVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSA 112 (353)
T ss_dssp EEESSEEEEEEETTTT-EEEEEECCCTTTEESEEEEEECTTTC---CEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTE
T ss_pred hhccCccceEECCCCC-EEEEEcCCCcCCCCCccEEEEcCCCC---eEEEEEec-CCCcceEEECCCCCEEEEEecCCCE
Confidence 4456788999999985 5666553 568999998765 44444443 3457789999999855666677899
Q ss_pred EEEEEcCCCceeEEeecccc---------ceEEEEEecCCCCeEEEEe--CCCeEEEEeCCCCCceeeeccCccceEEEE
Q 021121 131 VKLWTVDRPTSVRTFKEHAY---------CVYNATWNPRHSDVFCSAS--GDCTLRIWDVREMGSTMIIPAHEFEILACD 199 (317)
Q Consensus 131 v~iwd~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~ 199 (317)
|.+||+++++.+..+..+.. .+.+++|+|+ ++.+++++ .++.|.+||+++++....+..+...+..++
T Consensus 113 v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d-g~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~ 191 (353)
T 3vgz_A 113 VTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDA-TNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLA 191 (353)
T ss_dssp EEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETT-TTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCE
T ss_pred EEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCC-CCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEE
Confidence 99999999998887765432 2789999999 56555554 578999999999888887775566688999
Q ss_pred ecCCCCcEEEEEecCCcEEEEEccCCCccEEEEec----CCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeee
Q 021121 200 WNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNG----HGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGR 275 (317)
Q Consensus 200 ~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~ 275 (317)
|+| +++.+++++.++.|.+||..+.+. ...+.. +...+..++|+|+++.++++...++.|.+||..+++ ....
T Consensus 192 ~s~-dg~~l~~~~~~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~-~~~~ 268 (353)
T 3vgz_A 192 LDS-EGKRLYTTNADGELITIDTADNKI-LSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGN-ILAK 268 (353)
T ss_dssp EET-TTTEEEEECTTSEEEEEETTTTEE-EEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCC-EEEE
T ss_pred ECC-CCCEEEEEcCCCeEEEEECCCCeE-EEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCc-EEEE
Confidence 999 899999999999999999988664 444432 455678899999999655555566999999998876 3444
Q ss_pred eecccceeEeEEEEeccCCeEEEeecCCcEEEEecCCC
Q 021121 276 YDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGMD 313 (317)
Q Consensus 276 ~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~ 313 (317)
+.... ...++|+|++..++++...++.|.+||+...
T Consensus 269 ~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~ 304 (353)
T 3vgz_A 269 VAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSY 304 (353)
T ss_dssp EECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTTT
T ss_pred EEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCCC
Confidence 44332 2679999994335556667999999998764
No 146
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.94 E-value=7e-25 Score=204.64 Aligned_cols=277 Identities=10% Similarity=0.012 Sum_probs=210.4
Q ss_pred CcceeEEEEe-cCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCC-CeeEEEecCCCCCeEEEEEcCCe
Q 021121 7 PFNGYSVKFS-PFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTAD-GVYDLAWSESHDSLLIAAVADGS 84 (317)
Q Consensus 7 ~~~v~~~~~~-p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~l~~~~~dg~ 84 (317)
...+.+++|| | ++..++... ++.|.+|+..... . .....+.. .+..++|+ ++ ..|+.++.++.
T Consensus 295 ~~~v~~~~~S~p--dG~~la~~~-------~~~i~~~~~~~~~--~--~~~~~~~~~~~~~~~~s-dg-~~l~~~s~~~~ 359 (1045)
T 1k32_A 295 IPSKFAEDFSPL--DGDLIAFVS-------RGQAFIQDVSGTY--V--LKVPEPLRIRYVRRGGD-TK-VAFIHGTREGD 359 (1045)
T ss_dssp CGGGGEEEEEEC--GGGCEEEEE-------TTEEEEECTTSSB--E--EECSCCSCEEEEEECSS-SE-EEEEEEETTEE
T ss_pred ccccceeeecCC--CCCEEEEEE-------cCEEEEEcCCCCc--e--EEccCCCcceEEeeeEc-CC-CeEEEEECCCc
Confidence 3468999999 9 566565555 6799999987653 1 22234556 79999999 87 57888888888
Q ss_pred EE-EEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeeccccceEEEEEecCCCC
Q 021121 85 VK-IYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSD 163 (317)
Q Consensus 85 i~-v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 163 (317)
+. +|++..+ . ...+..|...+..++|+|+++ .|++++.++.|++||+.+++.......|...+.+++|+|+ ++
T Consensus 360 l~~~~d~~~~---~-~~~l~~~~~~~~~~~~SpDG~-~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpD-G~ 433 (1045)
T 1k32_A 360 FLGIYDYRTG---K-AEKFEENLGNVFAMGVDRNGK-FAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDN-SR 433 (1045)
T ss_dssp EEEEEETTTC---C-EEECCCCCCSEEEEEECTTSS-EEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTT-SC
T ss_pred eEEEEECCCC---C-ceEecCCccceeeeEECCCCC-EEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCC-CC
Confidence 88 8887654 2 233447788999999999998 8999999999999999999888777788888999999999 77
Q ss_pred eEEEEeCC----------CeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCC-------
Q 021121 164 VFCSASGD----------CTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYR------- 226 (317)
Q Consensus 164 ~l~~~~~d----------g~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~------- 226 (317)
.+++++.+ +.|++||+.+++ ...+..+...+..++|+| +++.|+.++.++...+|+.....
T Consensus 434 ~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~sp-dG~~l~~~s~~~~~~~~~~~~~~~~~~~~~ 511 (1045)
T 1k32_A 434 FIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDA-DSKNLYYLSYRSLDPSPDRVVLNFSFEVVS 511 (1045)
T ss_dssp EEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECT-TSCEEEEEESCCCCCEECSSSSCEECCSCB
T ss_pred eEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcC-CCCEEEEEecccCCcCcchhccccccccCc
Confidence 77777654 489999998876 666777888889999999 99999998887766666532211
Q ss_pred -----------------------------------ccEEEEecCCCceeEEEecCCCCeeEEe-------------eecC
Q 021121 227 -----------------------------------VPIAVLNGHGYAVRKVKFSPHRRNLLAS-------------CSYD 258 (317)
Q Consensus 227 -----------------------------------~~~~~~~~~~~~v~~~~~~~~~~~~l~~-------------~~~d 258 (317)
..+..+..|...+..++++|++. ++++ ....
T Consensus 512 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~-~~~~~~~~g~~~~~~~~~~~~ 590 (1045)
T 1k32_A 512 KPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSI-LIYSVPVHGEFAAYYQGAPEK 590 (1045)
T ss_dssp EEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEE-EEEECCCCCSHHHHHHCCCCC
T ss_pred eeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCe-EEEEecccCcccccccccCCC
Confidence 11233344667789999999997 4553 1234
Q ss_pred CeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEeecCCcEEEEecCCCC
Q 021121 259 MTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGMDP 314 (317)
Q Consensus 259 ~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~ 314 (317)
..|.+||+.+++. ..+. ..+..++|+|+ ++.|++++.+ .+++||+...+
T Consensus 591 ~~l~~~d~~~~~~--~~l~---~~v~~~~~S~D-G~~l~~~~~~-~i~~~d~~~~~ 639 (1045)
T 1k32_A 591 GVLLKYDVKTRKV--TEVK---NNLTDLRLSAD-RKTVMVRKDD-GKIYTFPLEKP 639 (1045)
T ss_dssp EEEEEEETTTCCE--EEEE---EEEEEEEECTT-SCEEEEEETT-SCEEEEESSCT
T ss_pred ceEEEEECCCCcE--EEee---cCcceEEECCC-CCEEEEEcCC-cEEEEeCccCc
Confidence 5788889887762 2222 56889999999 7888888766 79999998765
No 147
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.94 E-value=4.9e-25 Score=205.73 Aligned_cols=276 Identities=10% Similarity=0.043 Sum_probs=211.5
Q ss_pred cCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeE
Q 021121 6 TPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSV 85 (317)
Q Consensus 6 ~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 85 (317)
+...+.++.|+| + .++++... +|.+.||.++........+. .+ ..+...+|+|+| ..|+.+ .++.|
T Consensus 202 ~~~~v~~~~~s~--d-~l~~~~~~------dg~~~l~~~~~~g~~~~~l~--~~-~~~~~~~~SpDG-~~la~~-~~~~i 267 (1045)
T 1k32_A 202 MSTHVSSPVIVG--H-RIYFITDI------DGFGQIYSTDLDGKDLRKHT--SF-TDYYPRHLNTDG-RRILFS-KGGSI 267 (1045)
T ss_dssp CSSCCEEEEEET--T-EEEEEECT------TSSCEEEEEETTSCSCEECC--CC-CSSCEEEEEESS-SCEEEE-ETTEE
T ss_pred CCCcccceEEeC--C-EEEEEEec------cCceEEEEEeCCCCcceEec--CC-CCcceeeEcCCC-CEEEEE-eCCEE
Confidence 567788999999 4 66666654 78889998765432233322 22 356778999998 467666 48999
Q ss_pred EEEEeCCCCCCCCceeecc-----------CCcceEEEEEe-cCCCCEEEEEcCCCEEEEEEcCCCceeEEeecccc-ce
Q 021121 86 KIYDTALPPTANPIRSLHE-----------HTREVHSADYN-PTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAY-CV 152 (317)
Q Consensus 86 ~v~~~~~~~~~~~~~~~~~-----------~~~~v~~~~~~-~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~-~v 152 (317)
.+|++.. ..+..+.. |...+.+++|+ |+|+ .+++++ ++.|.+|++.+++.. .+..+.. .+
T Consensus 268 ~~~d~~~----~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~-~la~~~-~~~i~~~~~~~~~~~-~~~~~~~~~~ 340 (1045)
T 1k32_A 268 YIFNPDT----EKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGD-LIAFVS-RGQAFIQDVSGTYVL-KVPEPLRIRY 340 (1045)
T ss_dssp EEECTTT----CCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGG-CEEEEE-TTEEEEECTTSSBEE-ECSCCSCEEE
T ss_pred EEecCCc----eEeeeeccCcccccccccccccccceeeecCCCCC-EEEEEE-cCEEEEEcCCCCceE-EccCCCcceE
Confidence 9999832 22223333 44578999999 9998 677666 789999999877644 3555666 89
Q ss_pred EEEEEecCCCCeEEEEeCCCeEE-EEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEE
Q 021121 153 YNATWNPRHSDVFCSASGDCTLR-IWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAV 231 (317)
Q Consensus 153 ~~~~~~~~~~~~l~~~~~dg~i~-i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 231 (317)
..++|+ + ++.++.++.++.+. +||+.+++.. .+..+...+..++|+| +++.|++++.++.|++||+.+++. ...
T Consensus 341 ~~~~~s-d-g~~l~~~s~~~~l~~~~d~~~~~~~-~l~~~~~~~~~~~~Sp-DG~~la~~~~~~~v~~~d~~tg~~-~~~ 415 (1045)
T 1k32_A 341 VRRGGD-T-KVAFIHGTREGDFLGIYDYRTGKAE-KFEENLGNVFAMGVDR-NGKFAVVANDRFEIMTVDLETGKP-TVI 415 (1045)
T ss_dssp EEECSS-S-EEEEEEEETTEEEEEEEETTTCCEE-ECCCCCCSEEEEEECT-TSSEEEEEETTSEEEEEETTTCCE-EEE
T ss_pred EeeeEc-C-CCeEEEEECCCceEEEEECCCCCce-EecCCccceeeeEECC-CCCEEEEECCCCeEEEEECCCCce-EEe
Confidence 999999 7 78888888888899 9999876544 3446778899999999 999999999999999999988663 555
Q ss_pred EecCCCceeEEEecCCCCeeEEeeecC----------CeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEeec
Q 021121 232 LNGHGYAVRKVKFSPHRRNLLASCSYD----------MTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGW 301 (317)
Q Consensus 232 ~~~~~~~v~~~~~~~~~~~~l~~~~~d----------~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~ 301 (317)
...|...+..++|+|+|+ +|++++.+ +.|++||+.+++ ...+..|...+..++|+|+ ++.|+.++.
T Consensus 416 ~~~~~~~v~~~~~SpDG~-~la~~~~~~~~~~~~~~~~~i~l~d~~~g~--~~~l~~~~~~~~~~~~spd-G~~l~~~s~ 491 (1045)
T 1k32_A 416 ERSREAMITDFTISDNSR-FIAYGFPLKHGETDGYVMQAIHVYDMEGRK--IFAATTENSHDYAPAFDAD-SKNLYYLSY 491 (1045)
T ss_dssp EECSSSCCCCEEECTTSC-EEEEEEEECSSTTCSCCEEEEEEEETTTTE--EEECSCSSSBEEEEEECTT-SCEEEEEES
T ss_pred ccCCCCCccceEECCCCC-eEEEEecCccccccCCCCCeEEEEECCCCc--EEEeeCCCcccCCceEcCC-CCEEEEEec
Confidence 557888999999999999 46666554 489999998875 4566777888899999999 788888888
Q ss_pred CCcEEEEecC
Q 021121 302 DELVYVWQQG 311 (317)
Q Consensus 302 dg~i~~w~~~ 311 (317)
++...+|+..
T Consensus 492 ~~~~~~~~~~ 501 (1045)
T 1k32_A 492 RSLDPSPDRV 501 (1045)
T ss_dssp CCCCCEECSS
T ss_pred ccCCcCcchh
Confidence 8877777653
No 148
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.94 E-value=6.6e-24 Score=175.63 Aligned_cols=269 Identities=7% Similarity=0.032 Sum_probs=180.9
Q ss_pred CceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcC----CeEEEEEeCCC-CCCCCceeeccCCcceE
Q 021121 36 NGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVAD----GSVKIYDTALP-PTANPIRSLHEHTREVH 110 (317)
Q Consensus 36 ~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d----g~i~v~~~~~~-~~~~~~~~~~~~~~~v~ 110 (317)
++.|++|+++.....+..+... +...+..++|+|++ ++|++++.+ +.|.+|++... .....+.....+.....
T Consensus 26 ~~~i~~~~~d~~~g~~~~~~~~-~~~~p~~l~~spdg-~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~ 103 (361)
T 3scy_A 26 SKGIYTFRFNEETGESLPLSDA-EVANPSYLIPSADG-KFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPC 103 (361)
T ss_dssp CCEEEEEEEETTTCCEEEEEEE-ECSCCCSEEECTTS-SEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEE
T ss_pred CCCEEEEEEeCCCCCEEEeecc-cCCCCceEEECCCC-CEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcE
Confidence 6789999997655445555555 66778889999998 577777775 79999998753 12233334444556677
Q ss_pred EEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEe----e--c--------cccceEEEEEecCCCC-eEEEEeCCCeEE
Q 021121 111 SADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTF----K--E--------HAYCVYNATWNPRHSD-VFCSASGDCTLR 175 (317)
Q Consensus 111 ~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~----~--~--------~~~~v~~~~~~~~~~~-~l~~~~~dg~i~ 175 (317)
.+++ +++.++++...++.|.+|++.....+..+ . + +...+.+++|+|+ ++ ++++...++.|.
T Consensus 104 ~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spd-g~~l~~~~~~~~~v~ 180 (361)
T 3scy_A 104 YLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPD-GKYLLADDLGTDQIH 180 (361)
T ss_dssp EEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTT-SSEEEEEETTTTEEE
T ss_pred EEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCC-CCEEEEEeCCCCEEE
Confidence 7777 66634444457899999999754332211 1 1 1223588999999 66 555555689999
Q ss_pred EEeCCCCCc------e-------eeeccCccceEEEEecCCCCcEEEEEe-cCCcEEEEEccCCCc-cEEEEe---cCCC
Q 021121 176 IWDVREMGS------T-------MIIPAHEFEILACDWNKYDDCLIASAS-VDKSIKIWDVRNYRV-PIAVLN---GHGY 237 (317)
Q Consensus 176 i~d~~~~~~------~-------~~~~~~~~~v~~i~~~~~~~~~l~~~~-~d~~i~v~d~~~~~~-~~~~~~---~~~~ 237 (317)
+|++..... + .........+..++|+| +++++++++ .++.|.+||+.+++. .+..+. .+..
T Consensus 181 v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~ 259 (361)
T 3scy_A 181 KFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNS-DGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQ 259 (361)
T ss_dssp EEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECT-TSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCC
T ss_pred EEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcC-CCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCC
Confidence 999875442 1 11223345678999999 888777666 689999999986532 122222 2334
Q ss_pred ceeEEEecCCCCeeEEeeec-CCeEEEEecc--ccc-ceeeeeecccceeEeEEEEeccCCeEEEee-cCCcEEEEecCC
Q 021121 238 AVRKVKFSPHRRNLLASCSY-DMTVCLWDFM--VED-ALVGRYDHHTEFAVGVDMSVLVEGLLASTG-WDELVYVWQQGM 312 (317)
Q Consensus 238 ~v~~~~~~~~~~~~l~~~~~-d~~i~vwd~~--~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~-~dg~i~~w~~~~ 312 (317)
....++|+|+++.++++... ++.|.+|++. +++ ..+..+.. ...+..++|+|+ +++|++++ .++.|.+|+++.
T Consensus 260 ~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spd-g~~l~~~~~~~~~v~v~~~d~ 337 (361)
T 3scy_A 260 GSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPN-GKYLLVACRDTNVIQIFERDQ 337 (361)
T ss_dssp CEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTT-SCEEEEEETTTTEEEEEEECT
T ss_pred CcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCC-CCEEEEEECCCCCEEEEEEEC
Confidence 56799999999953344444 5899999986 233 12333333 456789999999 67666666 789999987764
No 149
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.94 E-value=4.9e-25 Score=176.85 Aligned_cols=225 Identities=11% Similarity=0.126 Sum_probs=170.1
Q ss_pred EEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCC-CceeEEeecc-ccceEEEE
Q 021121 79 AVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDR-PTSVRTFKEH-AYCVYNAT 156 (317)
Q Consensus 79 ~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~-~~~~~~~~~~-~~~v~~~~ 156 (317)
++.++.|++||+..+ + ...+..|...+.+++|+|+++ ++++++ ++.|++||+.+ ++.......+ ...+.+++
T Consensus 18 ~~~~~~i~~~d~~~~---~-~~~~~~~~~~v~~~~~spdg~-~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 91 (297)
T 2ojh_A 18 GSMRSSIEIFNIRTR---K-MRVVWQTPELFEAPNWSPDGK-YLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHG 91 (297)
T ss_dssp CCCCEEEEEEETTTT---E-EEEEEEESSCCEEEEECTTSS-EEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCE
T ss_pred CCcceeEEEEeCCCC---c-eeeeccCCcceEeeEECCCCC-EEEEEc-CCeEEEEeCCCCCCceEeccccccccccceE
Confidence 456889999998765 3 334556889999999999998 787776 78999999998 7766655554 36789999
Q ss_pred EecCCCCeEEEEe--CCC--eEEEEeCCCCCceeeeccCccceEEEEecCCCCcEEE-EEecCCcEEEEEccCCCccEEE
Q 021121 157 WNPRHSDVFCSAS--GDC--TLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIA-SASVDKSIKIWDVRNYRVPIAV 231 (317)
Q Consensus 157 ~~~~~~~~l~~~~--~dg--~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~-~~~~d~~i~v~d~~~~~~~~~~ 231 (317)
|+|+ ++.+++++ .++ .|..++..+++ ...+..+ ..+..++|+| +++.++ ++..++.+++|++.........
T Consensus 92 ~spd-g~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~sp-dg~~l~~~~~~~~~~~l~~~~~~~~~~~~ 167 (297)
T 2ojh_A 92 ISPD-GALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSP-DGKSFTYCGIRDQVFDIYSMDIDSGVETR 167 (297)
T ss_dssp ECTT-SSEEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECT-TSSEEEEEEEETTEEEEEEEETTTCCEEE
T ss_pred ECCC-CCEEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEECC-CCCEEEEEECCCCceEEEEEECCCCcceE
Confidence 9999 78888887 334 45555555444 3344433 3488999999 777666 7888999999997644334566
Q ss_pred EecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEeecC---------
Q 021121 232 LNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWD--------- 302 (317)
Q Consensus 232 ~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d--------- 302 (317)
+..+...+.+++|+|+++.+++++..++.+++|++.........+..|...+..++|+|+ +++|+.++.+
T Consensus 168 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~d-g~~l~~~~~~~~~~~~~~~ 246 (297)
T 2ojh_A 168 LTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPS-GDKVVFVSYDADVFDHPRD 246 (297)
T ss_dssp CCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTT-SSEEEEEEEETTCCSCCSS
T ss_pred cccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCC-CCEEEEEEcCCCCCccccc
Confidence 777888999999999999544455568999999987433355677778888999999999 7777777665
Q ss_pred --CcEEEEecCCCC
Q 021121 303 --ELVYVWQQGMDP 314 (317)
Q Consensus 303 --g~i~~w~~~~~~ 314 (317)
+.|++||+...+
T Consensus 247 ~~~~l~~~d~~~~~ 260 (297)
T 2ojh_A 247 LDVRVQLMDMDGGN 260 (297)
T ss_dssp EEEEEEEEETTSCS
T ss_pred CceEEEEEecCCCC
Confidence 569999997653
No 150
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.94 E-value=3.5e-25 Score=198.99 Aligned_cols=280 Identities=11% Similarity=0.140 Sum_probs=190.1
Q ss_pred ceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeec---------------CCCCeeEEEecCCCC
Q 021121 9 NGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFD---------------TADGVYDLAWSESHD 73 (317)
Q Consensus 9 ~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~---------------~~~~v~~~~~~~~~~ 73 (317)
.+..+.|. ++.++.+.. +| | +||+.++......+.... +...|.+++|+|+ .
T Consensus 27 ~~~~~~w~---g~~~~~~~~-------~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~ 93 (706)
T 2z3z_A 27 YVVGLQWM---GDNYVFIEG-------DD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-G 93 (706)
T ss_dssp -CTTCEEE---TTEEEEEET-------TE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-T
T ss_pred cCCCCcCc---CCeEEEEeC-------Cc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-C
Confidence 34557787 355665554 55 8 999987653102222111 0156999999999 4
Q ss_pred CeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCC-----CceeEEeecc
Q 021121 74 SLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDR-----PTSVRTFKEH 148 (317)
Q Consensus 74 ~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~-----~~~~~~~~~~ 148 (317)
.++.+ .++.|++||+..+ + ...+..+...+.+++|+|+|+ .|+.+ .++.|++||+.+ ++.......+
T Consensus 94 -~~~~~-~~~~i~~~d~~~~---~-~~~l~~~~~~~~~~~~SpdG~-~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~ 165 (706)
T 2z3z_A 94 -LVVLF-TQGGLVGFDMLAR---K-VTYLFDTNEETASLDFSPVGD-RVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDG 165 (706)
T ss_dssp -EEEEE-ETTEEEEEETTTT---E-EEEEECCTTCCTTCEECTTSS-EEEEE-ETTEEEEEECBCTTSCCCCCEESCSCC
T ss_pred -eEEEE-ECCEEEEEECCCC---c-eEEccCCcccccCCcCCCCCC-EEEEE-ECCeEEEEecCcccccCCCcEEeccCC
Confidence 44444 3599999998764 2 233445667788899999998 77775 679999999998 7665444333
Q ss_pred ccc--------------eEEEEEecCCCCeEEEEe---------------------------------CCCeEEEEeCCC
Q 021121 149 AYC--------------VYNATWNPRHSDVFCSAS---------------------------------GDCTLRIWDVRE 181 (317)
Q Consensus 149 ~~~--------------v~~~~~~~~~~~~l~~~~---------------------------------~dg~i~i~d~~~ 181 (317)
... +.++.|+|+ ++.|++++ .+..|++||+.+
T Consensus 166 ~~~~~~g~~~~~ee~~~~~~~~~SpD-g~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~ 244 (706)
T 2z3z_A 166 TETLVYGQAVHQREFGIEKGTFWSPK-GSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLAT 244 (706)
T ss_dssp BTTEEESSCCGGGCTTCCCSEEECTT-SSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTT
T ss_pred CCCeEcccchhhhhcCCCceEEECCC-CCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCC
Confidence 332 489999999 78888876 457899999988
Q ss_pred CCceeeec--cCccceEEEEecCCCCcEEEEEecCC-----cEEEEEccCCCccEEEEe-cCCC---ceeEEEecC--CC
Q 021121 182 MGSTMIIP--AHEFEILACDWNKYDDCLIASASVDK-----SIKIWDVRNYRVPIAVLN-GHGY---AVRKVKFSP--HR 248 (317)
Q Consensus 182 ~~~~~~~~--~~~~~v~~i~~~~~~~~~l~~~~~d~-----~i~v~d~~~~~~~~~~~~-~~~~---~v~~~~~~~--~~ 248 (317)
++...... .+...+.+++|+| +++.|++++.++ .|++||+.+++....... .+.. .+..++|+| ++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg 323 (706)
T 2z3z_A 245 GKTVYLQTGEPKEKFLTNLSWSP-DENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNN 323 (706)
T ss_dssp TEEEECCCCSCTTCEEEEEEECT-TSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSS
T ss_pred CceEeeccCCCCceeEeeEEEEC-CCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCC
Confidence 76544332 4567799999999 999888877775 899999988733222222 2222 346789999 99
Q ss_pred CeeEEeeecCCeEEEEecccccceeeeeecccceeEe-EEEEeccCCeEEEeecCC----cEEEEecCC
Q 021121 249 RNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVG-VDMSVLVEGLLASTGWDE----LVYVWQQGM 312 (317)
Q Consensus 249 ~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~l~s~~~dg----~i~~w~~~~ 312 (317)
+ ++++++.|+.++||++.........+..+...+.. ++|+|++..++++++.++ .|..|++..
T Consensus 324 ~-~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~ 391 (706)
T 2z3z_A 324 Q-FIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKG 391 (706)
T ss_dssp E-EEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTC
T ss_pred E-EEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCC
Confidence 8 78889999999999887333345666677777776 799999433445555555 566666554
No 151
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.94 E-value=4.5e-24 Score=174.46 Aligned_cols=239 Identities=9% Similarity=0.090 Sum_probs=174.3
Q ss_pred EEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCce-eEE
Q 021121 66 LAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTS-VRT 144 (317)
Q Consensus 66 ~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~-~~~ 144 (317)
..|.+++...+++++.++.|.+||..++ +....+..+...+ .++|+|+++.+++++..++.|.+||+.+++. ...
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~---~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~ 78 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTL---EILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVA 78 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTC---CEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEE
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCccc---ceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEe
Confidence 3466666667888888999999998866 4555555555666 9999999984444455589999999999887 667
Q ss_pred eeccccceEEEEEecCCCCeEEEEeCCC---eEEEEeCCCCCceeeeccCccceEEEEecCCCCc-EEEEEecCCc-EEE
Q 021121 145 FKEHAYCVYNATWNPRHSDVFCSASGDC---TLRIWDVREMGSTMIIPAHEFEILACDWNKYDDC-LIASASVDKS-IKI 219 (317)
Q Consensus 145 ~~~~~~~v~~~~~~~~~~~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~-~l~~~~~d~~-i~v 219 (317)
+..+..+..+++|+|+ +++++++..++ .|.+||+.+++.+..+.. .....+++|+| +++ ++++...++. |.+
T Consensus 79 ~~~~~~~~~~~~~s~d-g~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~sp-dg~~l~~~~~~~~~~i~~ 155 (331)
T 3u4y_A 79 IQEGQSSMADVDITPD-DQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI-PYDAVGIAISP-NGNGLILIDRSSANTVRR 155 (331)
T ss_dssp EEECSSCCCCEEECTT-SSEEEECCCSSSSCEEEEEETTTTEEEEEEEC-CTTEEEEEECT-TSSCEEEEEETTTTEEEE
T ss_pred cccCCCCccceEECCC-CCEEEEecCCCCcccEEEEECCCCCeEEEEEC-CCCccceEECC-CCCEEEEEecCCCceEEE
Confidence 7666666555999999 77777555553 899999999888777664 34568999999 776 5555566688 999
Q ss_pred EEccCCCccE---EEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccce--eeeeecccceeEeEEEEeccCC
Q 021121 220 WDVRNYRVPI---AVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDAL--VGRYDHHTEFAVGVDMSVLVEG 294 (317)
Q Consensus 220 ~d~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~ 294 (317)
|++....... ............++|+|+++.+++++..++.|.+||+.+++.. +..+.. ...+..++|+|+ ++
T Consensus 156 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~-~~~~~~~~~spd-g~ 233 (331)
T 3u4y_A 156 FKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGT-NNLPGTIVVSRD-GS 233 (331)
T ss_dssp EEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC-SSCCCCEEECTT-SS
T ss_pred EEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccC-CCCCceEEECCC-CC
Confidence 9987644321 1222344567899999999966666667899999999887630 444443 356789999999 56
Q ss_pred eE-EEeecCCcEEEEecCCC
Q 021121 295 LL-ASTGWDELVYVWQQGMD 313 (317)
Q Consensus 295 ~l-~s~~~dg~i~~w~~~~~ 313 (317)
+| ++...++.|.+||+...
T Consensus 234 ~l~v~~~~~~~i~~~d~~~~ 253 (331)
T 3u4y_A 234 TVYVLTESTVDVFNFNQLSG 253 (331)
T ss_dssp EEEEECSSEEEEEEEETTTT
T ss_pred EEEEEEcCCCEEEEEECCCC
Confidence 44 55556889999998764
No 152
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.94 E-value=4.9e-24 Score=175.32 Aligned_cols=274 Identities=13% Similarity=0.059 Sum_probs=180.2
Q ss_pred EEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCC--CeeEEEecCCCCCeEEEEEcCCeEEEEE
Q 021121 12 SVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTAD--GVYDLAWSESHDSLLIAAVADGSVKIYD 89 (317)
Q Consensus 12 ~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~l~~~~~dg~i~v~~ 89 (317)
.+++++ ++.++++... ++.|++||..... .+..+.... .+..++|+|++..+++++..++.|.+||
T Consensus 4 g~~~~~--~~~~~v~~~~------~~~v~~~d~~~~~----~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d 71 (349)
T 1jmx_B 4 GPALKA--GHEYMIVTNY------PNNLHVVDVASDT----VYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGID 71 (349)
T ss_dssp CCCCCT--TCEEEEEEET------TTEEEEEETTTTE----EEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred cccccC--CCEEEEEeCC------CCeEEEEECCCCc----EEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEe
Confidence 456777 6777777765 8999999997654 222223333 6889999999854555666789999999
Q ss_pred eCCCCCCCCceeeccC------CcceEEEEEecCCCCEEEEEcCC------------CEEEEEEcCCCce---eEEeecc
Q 021121 90 TALPPTANPIRSLHEH------TREVHSADYNPTRRDSFITSSWD------------DTVKLWTVDRPTS---VRTFKEH 148 (317)
Q Consensus 90 ~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~l~~~~~d------------g~v~iwd~~~~~~---~~~~~~~ 148 (317)
+.++ +....+... ...+..++|+|+++ ++++++.+ +.|.+||+.+++. +..+. +
T Consensus 72 ~~t~---~~~~~~~~~~~~~~~~~~~~~~~~spdg~-~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~ 146 (349)
T 1jmx_B 72 LDTC---KNTFHANLSSVPGEVGRSMYSFAISPDGK-EVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-M 146 (349)
T ss_dssp TTTT---EEEEEEESCCSTTEEEECSSCEEECTTSS-EEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-C
T ss_pred CCCC---cEEEEEEcccccccccccccceEECCCCC-EEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-C
Confidence 8765 444433322 23377899999998 77777754 8999999988543 33443 3
Q ss_pred ccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeeccCcc------------------------ceEEEEecCCC
Q 021121 149 AYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEF------------------------EILACDWNKYD 204 (317)
Q Consensus 149 ~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~------------------------~v~~i~~~~~~ 204 (317)
...+.+++|+|+ ++ +++++. .|.+||+.+++....+..... ....+++++ +
T Consensus 147 ~~~~~~~~~s~d-g~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d 221 (349)
T 1jmx_B 147 PRQVYLMRAADD-GS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFK-D 221 (349)
T ss_dssp CSSCCCEEECTT-SC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC---
T ss_pred CCcccceeECCC-Cc-EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecC-C
Confidence 346889999999 56 444443 499999998887766543320 233455554 2
Q ss_pred CcEEEE-EecCCcEEEEEccCCCccEEEEecCCCceeEEEecC-CCCeeEEeeecCCeEEEEecccccceeeeeecccce
Q 021121 205 DCLIAS-ASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSP-HRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEF 282 (317)
Q Consensus 205 ~~~l~~-~~~d~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~ 282 (317)
+..... ......+..+|..+.+........+...+..++|+| +++ +++++ ++.|.+||+.+++ ....+.. ...
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~-~l~~~--~~~v~~~d~~~~~-~~~~~~~-~~~ 296 (349)
T 1jmx_B 222 DKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPN-QIYGV--LNRLAKYDLKQRK-LIKAANL-DHT 296 (349)
T ss_dssp -----CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTT-EEEEE--ESEEEEEETTTTE-EEEEEEC-SSC
T ss_pred CcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCC-EEEEE--cCeEEEEECccCe-EEEEEcC-CCC
Confidence 211100 001111223555554433333344566788999999 998 46666 8899999998876 3344432 345
Q ss_pred eEeEEEEeccCCeEEEeecCCcEEEEecCCC
Q 021121 283 AVGVDMSVLVEGLLASTGWDELVYVWQQGMD 313 (317)
Q Consensus 283 v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~ 313 (317)
+.+++|+|+ +++|++++.++.|++||+.+.
T Consensus 297 ~~~~~~s~d-g~~l~~~~~~~~v~v~d~~~~ 326 (349)
T 1jmx_B 297 YYCVAFDKK-GDKLYLGGTFNDLAVFNPDTL 326 (349)
T ss_dssp CCEEEECSS-SSCEEEESBSSEEEEEETTTT
T ss_pred ccceEECCC-CCEEEEecCCCeEEEEecccc
Confidence 789999999 667777888999999999764
No 153
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.93 E-value=3.7e-24 Score=192.83 Aligned_cols=282 Identities=12% Similarity=0.075 Sum_probs=183.0
Q ss_pred ceeEEEEecCCCCeEEEEEeccccc---ccCceEEEEecCCCCCcceeeeee-cCCCCeeEEEecCCCCCeEEEEEcCCe
Q 021121 9 NGYSVKFSPFYESRLAVATAQNFGI---LGNGRVHVLDLSPAAPALTELVAF-DTADGVYDLAWSESHDSLLIAAVADGS 84 (317)
Q Consensus 9 ~v~~~~~~p~~~~~~~~~~~~~~~~---~~~g~i~i~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~dg~ 84 (317)
.|.+++||| +++.++........ ..++.+++||+..... ..+... .+...+..++|+||| +.|+.++. +.
T Consensus 62 ~v~~~~~Sp--Dg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~--~~l~~~~~~~~~~~~~~~SPdG-~~la~~~~-~~ 135 (723)
T 1xfd_A 62 RAIRYEISP--DREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP--QSLDPPEVSNAKLQYAGWGPKG-QQLIFIFE-NN 135 (723)
T ss_dssp TCSEEEECT--TSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC--EECCCTTCCSCCCSBCCBCSST-TCEEEEET-TE
T ss_pred ccceEEECC--CCCEEEEEecCccceeecceeeEEEEECCCCce--EeccCCccccccccccEECCCC-CEEEEEEC-Ce
Confidence 489999999 56655554431100 1137899999987652 222211 234458899999998 57777765 78
Q ss_pred EEEEEeCCCCCCCCceeeccCCcc------------------eEEEEEecCCCCEEEEEcCCC-----------------
Q 021121 85 VKIYDTALPPTANPIRSLHEHTRE------------------VHSADYNPTRRDSFITSSWDD----------------- 129 (317)
Q Consensus 85 i~v~~~~~~~~~~~~~~~~~~~~~------------------v~~~~~~~~~~~~l~~~~~dg----------------- 129 (317)
|++|++..+ +.......+... +.+++|+|||+ .|++++.++
T Consensus 136 i~~~~~~~g---~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~-~la~~~~~~~~~~~~~~~~~~~~~~~ 211 (723)
T 1xfd_A 136 IYYCAHVGK---QAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGT-RLAYAAINDSRVPIMELPTYTGSIYP 211 (723)
T ss_dssp EEEESSSSS---CCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSS-EEEEEEEECTTSCEEEECCCSSSSSC
T ss_pred EEEEECCCC---ceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCC-EEEEEEECCCccceEEeeccCCcCCC
Confidence 999998765 333333333332 37899999998 777776442
Q ss_pred -----------------EEEEEEcCCCceeEEeecc------ccceEEEEEecCCCCeEEEEeC----CCeEEEEeCCCC
Q 021121 130 -----------------TVKLWTVDRPTSVRTFKEH------AYCVYNATWNPRHSDVFCSASG----DCTLRIWDVREM 182 (317)
Q Consensus 130 -----------------~v~iwd~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~l~~~~~----dg~i~i~d~~~~ 182 (317)
.|++||+.+++....+..+ ...+..++|+|+ ++++++... +..|++||+.++
T Consensus 212 ~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpD-g~~l~~~~~~~~~~~~i~~~d~~~g 290 (723)
T 1xfd_A 212 TVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATS-TKVAVTWLNRAQNVSILTLCDATTG 290 (723)
T ss_dssp CCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSS-SEEEEEEEETTSCEEEEEEEETTTC
T ss_pred cceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCC-CeEEEEEEcCCCCeEEEEEEeCCCC
Confidence 8999999988765666543 567999999999 677766543 357999999988
Q ss_pred Cceeeecc-Cccce----EEEEecCCCCcEEEE--EecCC------cEEEEEc-cCCCc-cEEEEecCCCceeE-EEecC
Q 021121 183 GSTMIIPA-HEFEI----LACDWNKYDDCLIAS--ASVDK------SIKIWDV-RNYRV-PIAVLNGHGYAVRK-VKFSP 246 (317)
Q Consensus 183 ~~~~~~~~-~~~~v----~~i~~~~~~~~~l~~--~~~d~------~i~v~d~-~~~~~-~~~~~~~~~~~v~~-~~~~~ 246 (317)
+....+.. +...+ ..++|+| +++.|+. +..++ .|.+||. ..... ....+..+...+.. ++|+|
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~sp 369 (723)
T 1xfd_A 291 VCTKKHEDESEAWLHRQNEEPVFSK-DGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDE 369 (723)
T ss_dssp CEEEEEEEECSSCCCCCCCCCEECT-TSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEET
T ss_pred cceEEEEeccCCEEeccCCCceEcC-CCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcC
Confidence 76655433 23333 3789999 8876654 45666 5677773 33220 02333333334544 69999
Q ss_pred CCCeeEEeeecC--CeEEEEecccccc-eeeeeec---ccceeEeEEEEeccCCeEEEeecC
Q 021121 247 HRRNLLASCSYD--MTVCLWDFMVEDA-LVGRYDH---HTEFAVGVDMSVLVEGLLASTGWD 302 (317)
Q Consensus 247 ~~~~~l~~~~~d--~~i~vwd~~~~~~-~~~~~~~---~~~~v~~~~~~~~~~~~l~s~~~d 302 (317)
+++.+++++..+ +.+++|++..... ....+.. |...+..++|+|++..++++.+..
T Consensus 370 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 431 (723)
T 1xfd_A 370 KGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCEGP 431 (723)
T ss_dssp TTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECCSS
T ss_pred CCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEEccCC
Confidence 999544455554 7899999875431 2223332 566788999999943344444433
No 154
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.93 E-value=1.8e-22 Score=167.00 Aligned_cols=272 Identities=10% Similarity=0.058 Sum_probs=173.7
Q ss_pred cCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeec-CCCCeeEEEecCCCCCeEEEEE-cCC
Q 021121 6 TPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFD-TADGVYDLAWSESHDSLLIAAV-ADG 83 (317)
Q Consensus 6 ~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~-~dg 83 (317)
+...+..++|+| +++++++.+..- ..++.|.+|+++.....+..+.... +......+++ ++. +|++++ .++
T Consensus 48 ~~~~p~~l~~sp--dg~~l~~~~~~~--~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~-~l~~~~~~~~ 120 (361)
T 3scy_A 48 EVANPSYLIPSA--DGKFVYSVNEFS--KDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGK-NIVTANYSGG 120 (361)
T ss_dssp ECSCCCSEEECT--TSSEEEEEECCS--STTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSS-EEEEEETTTT
T ss_pred cCCCCceEEECC--CCCEEEEEEccC--CCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCC-EEEEEECCCC
Confidence 345667799999 566555554310 0147999999987533344444333 4456777888 664 555554 688
Q ss_pred eEEEEEeCCCCCCCCceeec-----------cCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCce------e----
Q 021121 84 SVKIYDTALPPTANPIRSLH-----------EHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTS------V---- 142 (317)
Q Consensus 84 ~i~v~~~~~~~~~~~~~~~~-----------~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~------~---- 142 (317)
.|.+|++............. .+...+.+++|+|+++.++++...++.|.+|++..... +
T Consensus 121 ~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~ 200 (361)
T 3scy_A 121 SITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKG 200 (361)
T ss_dssp EEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEE
T ss_pred EEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecc
Confidence 99999997543222221111 12334688999999984455556689999999875432 1
Q ss_pred ---EEeeccccceEEEEEecCCCCeEEEEe-CCCeEEEEeCCCCCc--eeeec---cCccceEEEEecCCCCcEEEEEec
Q 021121 143 ---RTFKEHAYCVYNATWNPRHSDVFCSAS-GDCTLRIWDVREMGS--TMIIP---AHEFEILACDWNKYDDCLIASASV 213 (317)
Q Consensus 143 ---~~~~~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~--~~~~~---~~~~~v~~i~~~~~~~~~l~~~~~ 213 (317)
.........+..++|+|+ ++++++++ .++.|.+||+++++. +..+. .+......++|+| ++++|+++..
T Consensus 201 ~~~~~~~~~~~~~~~~~~spd-g~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~sp-dg~~l~v~~~ 278 (361)
T 3scy_A 201 TPEAFKVAPGSGPRHLIFNSD-GKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSP-DGKYLYASNR 278 (361)
T ss_dssp EEEEEECCTTCCEEEEEECTT-SSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECT-TSSEEEEEEC
T ss_pred cccceecCCCCCCeEEEEcCC-CCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECC-CCCEEEEECC
Confidence 111233456789999999 66665555 689999999986643 22222 2234467999999 8988866665
Q ss_pred C--CcEEEEEcc--CCCc-cEEEEecCCCceeEEEecCCCCeeEEeee-cCCeEEEEecc--cccceeeee-ecccceeE
Q 021121 214 D--KSIKIWDVR--NYRV-PIAVLNGHGYAVRKVKFSPHRRNLLASCS-YDMTVCLWDFM--VEDALVGRY-DHHTEFAV 284 (317)
Q Consensus 214 d--~~i~v~d~~--~~~~-~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d~~i~vwd~~--~~~~~~~~~-~~~~~~v~ 284 (317)
+ +.|.+|++. +++. .+..+.. ...+..++|+|+++. |++++ .++.|.+|++. +++ +.... ..+...+.
T Consensus 279 ~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~-l~~~~~~~~~v~v~~~d~~~g~-~~~~~~~~~~~~p~ 355 (361)
T 3scy_A 279 LKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKY-LLVACRDTNVIQIFERDQATGL-LTDIKKDIKVDKPV 355 (361)
T ss_dssp SSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCE-EEEEETTTTEEEEEEECTTTCC-EEECSCCEECSSEE
T ss_pred CCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCE-EEEEECCCCCEEEEEEECCCCc-EeecceeeeCCCCe
Confidence 4 889999996 2231 2333343 557889999999995 55555 77999997554 444 22221 22344678
Q ss_pred eEEEE
Q 021121 285 GVDMS 289 (317)
Q Consensus 285 ~~~~~ 289 (317)
++.|.
T Consensus 356 ~v~~~ 360 (361)
T 3scy_A 356 CLKFV 360 (361)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 88875
No 155
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.93 E-value=1.5e-22 Score=166.51 Aligned_cols=249 Identities=12% Similarity=0.137 Sum_probs=169.6
Q ss_pred cCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeee-ecCCCCeeEEEecCCCCCeEEEEE-cCC
Q 021121 6 TPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVA-FDTADGVYDLAWSESHDSLLIAAV-ADG 83 (317)
Q Consensus 6 ~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~-~dg 83 (317)
+...+..++|+| +++++++.... .++.|.+|++.... ...+.. ..+...+..++|+|++. +|++++ .++
T Consensus 38 ~~~~p~~~a~sp--dg~l~~~~~~~----~~~~v~~~~~~~g~--~~~~~~~~~~~~~p~~~a~spdg~-~l~~~~~~~~ 108 (347)
T 3hfq_A 38 ATQNPTYLALSA--KDCLYSVDKED----DEGGIAAWQIDGQT--AHKLNTVVAPGTPPAYVAVDEARQ-LVYSANYHKG 108 (347)
T ss_dssp ECSCCCCEEECT--TCEEEEEEEET----TEEEEEEEEEETTE--EEEEEEEEEESCCCSEEEEETTTT-EEEEEETTTT
T ss_pred ccCCcceEEEcc--CCeEEEEEecC----CCceEEEEEecCCc--EEEeeeeecCCCCCEEEEECCCCC-EEEEEeCCCC
Confidence 445677899999 56555444310 15799999996543 233332 24566789999999984 666666 789
Q ss_pred eEEEEEeCCCCCCCCceeecc---------CCcceEEEEEecCCCCEEEEEcCCCEEEEEEcC-CCceeE--Eeec-ccc
Q 021121 84 SVKIYDTALPPTANPIRSLHE---------HTREVHSADYNPTRRDSFITSSWDDTVKLWTVD-RPTSVR--TFKE-HAY 150 (317)
Q Consensus 84 ~i~v~~~~~~~~~~~~~~~~~---------~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~-~~~~~~--~~~~-~~~ 150 (317)
.|.+|++........+..+.. +...+.+++|+|+++ ++++...++.|.+|++. +++... .+.. ...
T Consensus 109 ~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~ 187 (347)
T 3hfq_A 109 TAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGF 187 (347)
T ss_dssp EEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEECTTSCEEEEEEEECCTTC
T ss_pred EEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCC
Confidence 999999964322233332221 123488999999999 88888889999999998 444322 2222 233
Q ss_pred ceEEEEEecCCCC-eEEEEeCCCeEEEEeCCC--CCc--eeeeccCc------cceEEEEecCCCCcEE-EEEecCCcEE
Q 021121 151 CVYNATWNPRHSD-VFCSASGDCTLRIWDVRE--MGS--TMIIPAHE------FEILACDWNKYDDCLI-ASASVDKSIK 218 (317)
Q Consensus 151 ~v~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~--~~~--~~~~~~~~------~~v~~i~~~~~~~~~l-~~~~~d~~i~ 218 (317)
.+..++|+|+ ++ ++++...++.+.+|++.. ++. ...+.... ..+..++|+| ++++| ++...++.|.
T Consensus 188 ~p~~~~~spd-g~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~sp-dG~~l~v~~~~~~~v~ 265 (347)
T 3hfq_A 188 GPRHLVFSPD-GQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSH-DGHFLYVSNRGYNTLA 265 (347)
T ss_dssp CEEEEEECTT-SSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECT-TSCEEEEEEETTTEEE
T ss_pred CCceEEECCC-CCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECC-CCCEEEEEeCCCCEEE
Confidence 6788999999 66 555567789999999875 332 12222222 3578899999 88866 5566689999
Q ss_pred EEEccCCC--ccEEEEecCCCceeEEEecCCCCeeEEeee-cCCeEEEEecc
Q 021121 219 IWDVRNYR--VPIAVLNGHGYAVRKVKFSPHRRNLLASCS-YDMTVCLWDFM 267 (317)
Q Consensus 219 v~d~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d~~i~vwd~~ 267 (317)
+||+.... ..+..+..+...+..++|+|+++. |++++ .++.|.+|++.
T Consensus 266 v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~-l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 266 VFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAF-VVVVNQNTDNATLYARD 316 (347)
T ss_dssp EEEECGGGCEEEEEEEECSSSCCCEEEECTTSSE-EEEEETTTTEEEEEEEC
T ss_pred EEEECCCCcEEEeEEEecCCCCcCeEEECCCCCE-EEEEEcCCCcEEEEEEe
Confidence 99987322 234455556667899999999995 55555 55899999543
No 156
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.93 E-value=2.3e-22 Score=166.55 Aligned_cols=267 Identities=6% Similarity=-0.001 Sum_probs=177.4
Q ss_pred ceEEEEecCCCCCcceeeeee--cCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeC-CCCCCCCceeecc-CCcceEEE
Q 021121 37 GRVHVLDLSPAAPALTELVAF--DTADGVYDLAWSESHDSLLIAAVADGSVKIYDTA-LPPTANPIRSLHE-HTREVHSA 112 (317)
Q Consensus 37 g~i~i~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~-~~~~~~~~~~~~~-~~~~v~~~ 112 (317)
+.|.+|+++.....+..+... .....+..++|+|++ ++|++++.+ .|.+|++. .+ +....... ..+....+
T Consensus 14 ~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg-~~l~~~~~~-~v~~~~~~~~g---~~~~~~~~~~~g~~~~~ 88 (365)
T 1jof_A 14 GAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHER-KNIYGAAMK-KWSSFAVKSPT---EIVHEASHPIGGHPRAN 88 (365)
T ss_dssp CEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTS-SEEEEEEBT-EEEEEEEEETT---EEEEEEEEECCSSGGGG
T ss_pred CcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCC-CEEEEEccc-eEEEEEECCCC---CEEEeeEeecCCCCccE
Confidence 578888886544334444332 233468899999998 578888877 89999986 43 22221110 01234568
Q ss_pred EEecCCCC-EEEEEc-------------CCCEEEEEEcC-CCceeEEee----ccccceEEEEEecCCCCeEEEEe-CCC
Q 021121 113 DYNPTRRD-SFITSS-------------WDDTVKLWTVD-RPTSVRTFK----EHAYCVYNATWNPRHSDVFCSAS-GDC 172 (317)
Q Consensus 113 ~~~~~~~~-~l~~~~-------------~dg~v~iwd~~-~~~~~~~~~----~~~~~v~~~~~~~~~~~~l~~~~-~dg 172 (317)
+|+|+++. +++++. .+|.+.+|++. +++....+. .+...+.+++|+|+ ++.++++. .++
T Consensus 89 ~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spd-G~~l~~~~~~~~ 167 (365)
T 1jof_A 89 DADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPT-ETYLYSADLTAN 167 (365)
T ss_dssp CTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTT-SSEEEEEETTTT
T ss_pred EECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCC-CCEEEEEcCCCC
Confidence 89999973 244553 68999999997 455544443 24567999999999 67666655 468
Q ss_pred eEEEEeCC-CCCce--eeec--cCccceEEEEecCCCCcEEEEEec-CCcEEEEEccC--CCcc--EEEEe-------cC
Q 021121 173 TLRIWDVR-EMGST--MIIP--AHEFEILACDWNKYDDCLIASASV-DKSIKIWDVRN--YRVP--IAVLN-------GH 235 (317)
Q Consensus 173 ~i~i~d~~-~~~~~--~~~~--~~~~~v~~i~~~~~~~~~l~~~~~-d~~i~v~d~~~--~~~~--~~~~~-------~~ 235 (317)
.|++||+. +++.. ..+. .+...+..++|+| +++++++++. ++.|.+|++.. ++.. ...+. +|
T Consensus 168 ~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~sp-dg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~ 246 (365)
T 1jof_A 168 KLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHP-TGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDR 246 (365)
T ss_dssp EEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCB
T ss_pred EEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECC-CCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCc
Confidence 99999998 66543 2232 2355689999999 8888877664 68999998753 3321 11121 11
Q ss_pred CC------ceeEEE-ecCCCCeeEEeeec-CC-----eEEEEecc-cccceee---eeecccceeEeEEEEe---ccCCe
Q 021121 236 GY------AVRKVK-FSPHRRNLLASCSY-DM-----TVCLWDFM-VEDALVG---RYDHHTEFAVGVDMSV---LVEGL 295 (317)
Q Consensus 236 ~~------~v~~~~-~~~~~~~~l~~~~~-d~-----~i~vwd~~-~~~~~~~---~~~~~~~~v~~~~~~~---~~~~~ 295 (317)
.. .+..++ |+|+|+. |+++.. ++ .|.+|++. +++ +.. ....+...+..++|+| + +++
T Consensus 247 ~~~~~~~~~~~~i~~~spdG~~-l~v~~~~~~~~~~~~i~v~~~~~~g~-~~~~~~~~~~~~~~~~~~a~sp~~~d-g~~ 323 (365)
T 1jof_A 247 DPETGKGLYRADVCALTFSGKY-MFASSRANKFELQGYIAGFKLRDCGS-IEKQLFLSPTPTSGGHSNAVSPCPWS-DEW 323 (365)
T ss_dssp CTTTSSBSEEEEEEEECTTSSE-EEEEEEESSTTSCCEEEEEEECTTSC-EEEEEEEEECSSCCTTCCCEEECTTC-TTE
T ss_pred ccccccccccccEEEECCCCCE-EEEECCCCCCCCCCeEEEEEECCCCC-EEEeeeeeecCCCCcccceecCCCcC-CCE
Confidence 22 478999 9999995 555543 33 89999996 443 322 2333445577899999 7 778
Q ss_pred EEEeec-CCcEEEEecCCC
Q 021121 296 LASTGW-DELVYVWQQGMD 313 (317)
Q Consensus 296 l~s~~~-dg~i~~w~~~~~ 313 (317)
|++++. ++.|.+|+++.+
T Consensus 324 l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 324 MAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp EEEECSSSCEEEEEEEETT
T ss_pred EEEEEcCCCeEEEEEEchh
Confidence 887775 589999998654
No 157
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.92 E-value=7e-24 Score=190.91 Aligned_cols=277 Identities=10% Similarity=0.093 Sum_probs=186.7
Q ss_pred eEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCC---CCeeEEEecCCCCCeEEEEEc------
Q 021121 11 YSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTA---DGVYDLAWSESHDSLLIAAVA------ 81 (317)
Q Consensus 11 ~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~l~~~~~------ 81 (317)
.+++|+| ++.++++.. +|.|++||+..+.. ..+.. .+. ..+.+++|+||| ++|+.++.
T Consensus 19 ~~~~~s~--dg~~~~~~~-------d~~i~~~~~~~g~~--~~~~~-~~~~~~~~~~~~~~SpDg-~~la~~~~~~~~~~ 85 (719)
T 1z68_A 19 FFPNWIS--GQEYLHQSA-------DNNIVLYNIETGQS--YTILS-NRTMKSVNASNYGLSPDR-QFVYLESDYSKLWR 85 (719)
T ss_dssp CCCEESS--SSEEEEECT-------TSCEEEEESSSCCE--EEEEC-HHHHHTTTCSEEEECTTS-SEEEEEEEEEECSS
T ss_pred CccEECC--CCeEEEEcC-------CCCEEEEEcCCCcE--EEEEc-cccccccceeeEEECCCC-CeEEEEecCceeEE
Confidence 4789999 567776654 88999999987652 22211 121 148999999999 57777765
Q ss_pred ---CCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEe-eccccce-----
Q 021121 82 ---DGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTF-KEHAYCV----- 152 (317)
Q Consensus 82 ---dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~-~~~~~~v----- 152 (317)
++.|++||+..++... ...+ ...+..++|+|||+ .|+.+. ++.|++||+.+++..... .++...+
T Consensus 86 ~s~~~~i~~~d~~~g~~~~-~~~l---~~~~~~~~~SPDG~-~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~ 159 (719)
T 1z68_A 86 YSYTATYYIYDLSNGEFVR-GNEL---PRPIQYLCWSPVGS-KLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIP 159 (719)
T ss_dssp SCEEEEEEEEETTTTEECC-SSCC---CSSBCCEEECSSTT-CEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSC
T ss_pred eecceEEEEEECCCCcccc-ceec---CcccccceECCCCC-EEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccc
Confidence 6899999998652100 0112 24688899999998 677765 789999999887664432 1222212
Q ss_pred ------------EEEEEecCCCCeEEEEeCCC----------------------------------eEEEEeCCCCCce-
Q 021121 153 ------------YNATWNPRHSDVFCSASGDC----------------------------------TLRIWDVREMGST- 185 (317)
Q Consensus 153 ------------~~~~~~~~~~~~l~~~~~dg----------------------------------~i~i~d~~~~~~~- 185 (317)
.+++|+|+ ++.|++++.|. .|++||+.+++..
T Consensus 160 ~~v~~ee~~~~~~~~~wSPD-G~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~ 238 (719)
T 1z68_A 160 DWVYEEEMLATKYALWWSPN-GKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVG 238 (719)
T ss_dssp CHHHHHHTTCSSCCEEECTT-SSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHC
T ss_pred cceeeeecccCcccEEECCC-CCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccc
Confidence 48999999 78888876542 7889999887642
Q ss_pred -------eeeccCccceEEEEecCCCCcEEEEEecCC----cEEEEE----ccCCCccEEEE----ecCCCcee-----E
Q 021121 186 -------MIIPAHEFEILACDWNKYDDCLIASASVDK----SIKIWD----VRNYRVPIAVL----NGHGYAVR-----K 241 (317)
Q Consensus 186 -------~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~----~i~v~d----~~~~~~~~~~~----~~~~~~v~-----~ 241 (317)
..+..+...+.+++|+| +++++++....+ .|.+|| ..+++. .... ..|...+. .
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~Sp-D~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~ 316 (719)
T 1z68_A 239 PQEVPVPAMIASSDYYFSWLTWVT-DERVCLQWLKRVQNVSVLSICDFREDWQTWDC-PKTQEHIEESRTGWAGGFFVST 316 (719)
T ss_dssp CEECCCCHHHHTSCEEEEEEEESS-SSEEEEEEEESSTTEEEEEEEEECSSSSSEEC-CGGGEEEEECSSSCSSSSSCCC
T ss_pred eeEccCCccCCCCcceEEEeEEeC-CCeEEEEEeccccCeEEEEEEcccCCCCCCce-EEEEecccccCCceEccccCCc
Confidence 12235777899999999 788777754332 488899 665442 2222 45666676 8
Q ss_pred EEecCCCCeeEE-eeecCC--eEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEeec----CCcEEEEecCC
Q 021121 242 VKFSPHRRNLLA-SCSYDM--TVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGW----DELVYVWQQGM 312 (317)
Q Consensus 242 ~~~~~~~~~~l~-~~~~d~--~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~----dg~i~~w~~~~ 312 (317)
+.|+|+|+.+++ +...+| .|.+||+.+++ ...+..+...+..+.++ +++.+++++.. ++..++|.+..
T Consensus 317 ~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~--~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 317 PVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN--AIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp CEECTTSSCEEEEEECTTSCEEEEEESSCSTT--CEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEEC
T ss_pred cEECCCCCeEEEEEEccCCceEEEEEECCCCc--eEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeC
Confidence 899999986444 344555 57777876654 33455555567777777 63444444444 48899998865
No 158
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.92 E-value=6.2e-24 Score=186.74 Aligned_cols=233 Identities=12% Similarity=0.038 Sum_probs=173.7
Q ss_pred CCCeeEEEecCCCCCeEEEEEc-CCeEEEEEeCCCCCCCCceeeccCC-cceEEEEEecCCCCEEEEEcC---CCEEEEE
Q 021121 60 ADGVYDLAWSESHDSLLIAAVA-DGSVKIYDTALPPTANPIRSLHEHT-REVHSADYNPTRRDSFITSSW---DDTVKLW 134 (317)
Q Consensus 60 ~~~v~~~~~~~~~~~~l~~~~~-dg~i~v~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~~~~~---dg~v~iw 134 (317)
..+|.+++|+||| +.|+.++. +|+++||+++.+ . ...+..|. ..+..+.|+|+ + ++++++. +....+|
T Consensus 21 ~~~~~~~~~~~DG-~~la~~s~~~g~~~lw~~~~g---~-~~~lt~~~~~~~~~~~~spd-~-~l~~~~~~~g~~~~~l~ 93 (582)
T 3o4h_A 21 AVEKYSLQGVVDG-DKLLVVGFSEGSVNAYLYDGG---E-TVKLNREPINSVLDPHYGVG-R-VILVRDVSKGAEQHALF 93 (582)
T ss_dssp HSCEEEEEEEETT-TEEEEEEEETTEEEEEEEETT---E-EEECCSSCCSEECEECTTCS-E-EEEEEECSTTSCCEEEE
T ss_pred ccchheeecCCCC-CeEEEEEccCCceeEEEEcCC---C-cEeeecccccccccccCCCC-e-EEEEeccCCCCcceEEE
Confidence 4569999999999 47777666 999999998543 3 33344444 68999999998 5 7777764 4555565
Q ss_pred EcCC--CceeEEeeccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEe
Q 021121 135 TVDR--PTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASAS 212 (317)
Q Consensus 135 d~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~ 212 (317)
.+.. ......+.... .+...+|+|++..++++.+.++.+.+||+.+++....... .. .+++|+| +++.+++++
T Consensus 94 ~~~~~~~g~~~~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~-~~--~~~~~sp-DG~~la~~~ 168 (582)
T 3o4h_A 94 KVNTSRPGEEQRLEAVK-PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARL-PG--FGFVSDI-RGDLIAGLG 168 (582)
T ss_dssp EEETTSTTCCEECTTSC-SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEE-SS--CEEEEEE-ETTEEEEEE
T ss_pred EEeccCCCccccccCCC-CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecC-CC--ceEEECC-CCCEEEEEE
Confidence 5433 22222333222 3446788998555555655566666999988765544432 22 7899999 999999887
Q ss_pred cC----CcEEEEEccCCCccEEEEecCCCceeEEEecCCCCeeEEeeecCC--eEEEEecccccceeeeeecccceeEeE
Q 021121 213 VD----KSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDM--TVCLWDFMVEDALVGRYDHHTEFAVGV 286 (317)
Q Consensus 213 ~d----~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~--~i~vwd~~~~~~~~~~~~~~~~~v~~~ 286 (317)
.+ +.|++||+.+++ ...+..|...+..++|+|||+ .|+++..++ .|++||+.+++.. .+..|...+..+
T Consensus 169 ~~~~~~~~i~~~d~~~g~--~~~l~~~~~~~~~~~~SpDG~-~l~~~~~~~~~~i~~~d~~~~~~~--~~~~~~~~~~~~ 243 (582)
T 3o4h_A 169 FFGGGRVSLFTSNLSSGG--LRVFDSGEGSFSSASISPGMK-VTAGLETAREARLVTVDPRDGSVE--DLELPSKDFSSY 243 (582)
T ss_dssp EEETTEEEEEEEETTTCC--CEEECCSSCEEEEEEECTTSC-EEEEEECSSCEEEEEECTTTCCEE--ECCCSCSHHHHH
T ss_pred EcCCCCeEEEEEcCCCCC--ceEeecCCCccccceECCCCC-EEEEccCCCeeEEEEEcCCCCcEE--EccCCCcChhhh
Confidence 77 789999998766 346778888899999999999 577888888 8999999887633 666777777777
Q ss_pred E--------EEeccCCeEEEeecCCcEEEEec
Q 021121 287 D--------MSVLVEGLLASTGWDELVYVWQQ 310 (317)
Q Consensus 287 ~--------~~~~~~~~l~s~~~dg~i~~w~~ 310 (317)
+ |+|+ +.++++++.|+.+++|++
T Consensus 244 ~~~~~~~~~~spd-g~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 244 RPTAITWLGYLPD-GRLAVVARREGRSAVFID 274 (582)
T ss_dssp CCSEEEEEEECTT-SCEEEEEEETTEEEEEET
T ss_pred hhccccceeEcCC-CcEEEEEEcCCcEEEEEE
Confidence 7 9999 589999999999999998
No 159
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.92 E-value=1.7e-22 Score=165.21 Aligned_cols=246 Identities=11% Similarity=0.057 Sum_probs=171.8
Q ss_pred ceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecC----CCCeeEEEecCCCCCeEEEEE----
Q 021121 9 NGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDT----ADGVYDLAWSESHDSLLIAAV---- 80 (317)
Q Consensus 9 ~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~l~~~~---- 80 (317)
.+..++|+|+ ...++++... ++.|.+||+..... ...+. ..+ ...+..++|+|+++ .++++.
T Consensus 35 ~~~~~~~s~d-g~~l~v~~~~------~~~v~~~d~~~~~~-~~~~~-~~~~~~~~~~~~~~~~s~dg~-~l~~~~~~~~ 104 (337)
T 1pby_B 35 TPMVPMVAPG-GRIAYATVNK------SESLVKIDLVTGET-LGRID-LSTPEERVKSLFGAALSPDGK-TLAIYESPVR 104 (337)
T ss_dssp CCCCEEECTT-SSEEEEEETT------TTEEEEEETTTCCE-EEEEE-CCBTTEEEECTTCEEECTTSS-EEEEEEEEEE
T ss_pred CccceEEcCC-CCEEEEEeCC------CCeEEEEECCCCCe-EeeEE-cCCcccccccccceEECCCCC-EEEEEecccc
Confidence 5889999994 2245555543 78999999987642 11111 111 12678899999984 677665
Q ss_pred --------cCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeeccccce
Q 021121 81 --------ADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCV 152 (317)
Q Consensus 81 --------~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v 152 (317)
.++.|.+||+..+ +....+.. ...+.+++|+|+++ .++++ ++.|.+||+.+++....+..+.. .
T Consensus 105 ~~~~~~~~~~~~i~v~d~~~~---~~~~~~~~-~~~~~~~~~s~dg~-~l~~~--~~~i~~~d~~~~~~~~~~~~~~~-~ 176 (337)
T 1pby_B 105 LELTHFEVQPTRVALYDAETL---SRRKAFEA-PRQITMLAWARDGS-KLYGL--GRDLHVMDPEAGTLVEDKPIQSW-E 176 (337)
T ss_dssp ECSSCEEECCCEEEEEETTTT---EEEEEEEC-CSSCCCEEECTTSS-CEEEE--SSSEEEEETTTTEEEEEECSTTT-T
T ss_pred cccccccccCceEEEEECCCC---cEEEEEeC-CCCcceeEECCCCC-EEEEe--CCeEEEEECCCCcEeeeeecccc-C
Confidence 5799999998755 44444443 45678899999998 56666 58899999999988777664431 1
Q ss_pred EEEEEecCCCCeEEEEeCCC-----------------------eEEEEeCCCCCce-eeeccCccceEEEEecCCCCcEE
Q 021121 153 YNATWNPRHSDVFCSASGDC-----------------------TLRIWDVREMGST-MIIPAHEFEILACDWNKYDDCLI 208 (317)
Q Consensus 153 ~~~~~~~~~~~~l~~~~~dg-----------------------~i~i~d~~~~~~~-~~~~~~~~~v~~i~~~~~~~~~l 208 (317)
..+.|+|++..+++++..++ .|.+||+++++.. ..+..+...+.+++|+| +++++
T Consensus 177 ~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l 255 (337)
T 1pby_B 177 AETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNP-AKTRA 255 (337)
T ss_dssp TTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECT-TSSEE
T ss_pred CCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECC-CCCEE
Confidence 12378888443443333333 4689999988764 22334556678999999 88888
Q ss_pred EEEecCCcEEEEEccCCCccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeecc
Q 021121 209 ASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHH 279 (317)
Q Consensus 209 ~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~ 279 (317)
+++ ++.|++||+.+.+. +..+.. ...+.+++|+|+++ +|++++.++.|.+||+.+++ .+..+..+
T Consensus 256 ~~~--~~~v~~~d~~~~~~-~~~~~~-~~~~~~~~~s~dg~-~l~~~~~~~~i~v~d~~~~~-~~~~~~~~ 320 (337)
T 1pby_B 256 FGA--YNVLESFDLEKNAS-IKRVPL-PHSYYSVNVSTDGS-TVWLGGALGDLAAYDAETLE-KKGQVDLP 320 (337)
T ss_dssp EEE--ESEEEEEETTTTEE-EEEEEC-SSCCCEEEECTTSC-EEEEESBSSEEEEEETTTCC-EEEEEECG
T ss_pred EEe--CCeEEEEECCCCcC-cceecC-CCceeeEEECCCCC-EEEEEcCCCcEEEEECcCCc-EEEEEEcC
Confidence 887 68999999988653 444443 34678999999999 56667889999999999876 44454443
No 160
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.89 E-value=1.8e-21 Score=175.30 Aligned_cols=287 Identities=11% Similarity=0.058 Sum_probs=186.4
Q ss_pred ceeEEEEecCCCCeEEEEEecc---cccccCceEEEEecCCCCCcc-eeeeeecCCCCeeEEEecCCCCCeEEEEEcCCe
Q 021121 9 NGYSVKFSPFYESRLAVATAQN---FGILGNGRVHVLDLSPAAPAL-TELVAFDTADGVYDLAWSESHDSLLIAAVADGS 84 (317)
Q Consensus 9 ~v~~~~~~p~~~~~~~~~~~~~---~~~~~~g~i~i~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 84 (317)
.+.+++||| +++.++.+... +-...++.|++||+..+.... .. ....+..++|+|||. .|+.+. ++.
T Consensus 61 ~~~~~~~Sp--Dg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~-----l~~~~~~~~~SPDG~-~la~~~-~~~ 131 (719)
T 1z68_A 61 NASNYGLSP--DRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNE-----LPRPIQYLCWSPVGS-KLAYVY-QNN 131 (719)
T ss_dssp TCSEEEECT--TSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSC-----CCSSBCCEEECSSTT-CEEEEE-TTE
T ss_pred ceeeEEECC--CCCeEEEEecCceeEEeecceEEEEEECCCCcccccee-----cCcccccceECCCCC-EEEEEE-CCe
Confidence 388999999 55555444321 000125799999998764200 11 135688999999994 777765 789
Q ss_pred EEEEEeCCCCCCCCceee-ccCCcce-----------------EEEEEecCCCCEEEEEcCCC-----------------
Q 021121 85 VKIYDTALPPTANPIRSL-HEHTREV-----------------HSADYNPTRRDSFITSSWDD----------------- 129 (317)
Q Consensus 85 i~v~~~~~~~~~~~~~~~-~~~~~~v-----------------~~~~~~~~~~~~l~~~~~dg----------------- 129 (317)
|++|++..++ ..... .++...+ .+++|+|||+ .|++++.|.
T Consensus 132 i~~~~~~~g~---~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~-~la~~~~d~~~~~~~~~~~~~~~~~~ 207 (719)
T 1z68_A 132 IYLKQRPGDP---PFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGK-FLAYAEFNDTDIPVIAYSYYGDEQYP 207 (719)
T ss_dssp EEEESSTTSC---CEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSS-EEEEEEEECTTSCEEEEEECCSSSSC
T ss_pred EEEEeCCCCC---cEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCC-EEEEEEECCCCCceEEeeccCCCCCc
Confidence 9999987652 22211 2222222 4899999998 788776542
Q ss_pred -----------------EEEEEEcCCCcee--EE------eeccccceEEEEEecCCCCeEEEEeCC----CeEEEEe--
Q 021121 130 -----------------TVKLWTVDRPTSV--RT------FKEHAYCVYNATWNPRHSDVFCSASGD----CTLRIWD-- 178 (317)
Q Consensus 130 -----------------~v~iwd~~~~~~~--~~------~~~~~~~v~~~~~~~~~~~~l~~~~~d----g~i~i~d-- 178 (317)
.|++||+.+++.. .. +..+...+..++|+|+ ++++++.... ..|.+||
T Consensus 208 ~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD-~~~~~~~~~~~~~~~~l~~~d~~ 286 (719)
T 1z68_A 208 RTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTD-ERVCLQWLKRVQNVSVLSICDFR 286 (719)
T ss_dssp EEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSS-SEEEEEEEESSTTEEEEEEEEEC
T ss_pred cceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCC-CeEEEEEeccccCeEEEEEEccc
Confidence 7899999887643 12 2357778999999999 7777764432 3488999
Q ss_pred --CCCCCceeee----ccCccceE-----EEEecCCCCcEEEE--EecCC--cEEEEEccCCCccEEEEecCCCceeEEE
Q 021121 179 --VREMGSTMII----PAHEFEIL-----ACDWNKYDDCLIAS--ASVDK--SIKIWDVRNYRVPIAVLNGHGYAVRKVK 243 (317)
Q Consensus 179 --~~~~~~~~~~----~~~~~~v~-----~i~~~~~~~~~l~~--~~~d~--~i~v~d~~~~~~~~~~~~~~~~~v~~~~ 243 (317)
+.+++....+ ..+...+. .+.|+| +++.++. ...++ .|.+||+.+.+ ...+..+...+..+.
T Consensus 287 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~g~~~l~~~~~~~~~--~~~lt~~~~~v~~~~ 363 (719)
T 1z68_A 287 EDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSY-DAISYYKIFSDKDGYKHIHYIKDTVEN--AIQITSGKWEAINIF 363 (719)
T ss_dssp SSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECT-TSSCEEEEEECTTSCEEEEEESSCSTT--CEECSCSSSCEEEEE
T ss_pred CCCCCCceEEEEecccccCCceEccccCCccEECC-CCCeEEEEEEccCCceEEEEEECCCCc--eEecccCceEEEEEE
Confidence 7776655444 35566665 789999 8775443 44555 57777776654 455555666678887
Q ss_pred ecCCCCeeEEeeec----CCeEEEEeccc--ccceeeeee----cccceeEeEEEEeccCCeEEEeecC--CcEEEEecC
Q 021121 244 FSPHRRNLLASCSY----DMTVCLWDFMV--EDALVGRYD----HHTEFAVGVDMSVLVEGLLASTGWD--ELVYVWQQG 311 (317)
Q Consensus 244 ~~~~~~~~l~~~~~----d~~i~vwd~~~--~~~~~~~~~----~~~~~v~~~~~~~~~~~~l~s~~~d--g~i~~w~~~ 311 (317)
++ +++.+++++.. ++..++|.+.. +......+. +|...+..+.|+|++..++++++.+ ..+.+|++.
T Consensus 364 ~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~~ 442 (719)
T 1z68_A 364 RV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDGR 442 (719)
T ss_dssp EE-CSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECSS
T ss_pred EE-eCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEECC
Confidence 77 77765555554 58889998765 211112222 2556788899999954455555543 467888876
Q ss_pred CC
Q 021121 312 MD 313 (317)
Q Consensus 312 ~~ 313 (317)
.+
T Consensus 443 ~g 444 (719)
T 1z68_A 443 TD 444 (719)
T ss_dssp SC
T ss_pred CC
Confidence 54
No 161
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.89 E-value=4.7e-21 Score=159.93 Aligned_cols=280 Identities=10% Similarity=0.031 Sum_probs=178.6
Q ss_pred EEEecCCCCe-EEEEEecccccccCc--eEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeEEEEE
Q 021121 13 VKFSPFYESR-LAVATAQNFGILGNG--RVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYD 89 (317)
Q Consensus 13 ~~~~p~~~~~-~~~~~~~~~~~~~~g--~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~ 89 (317)
.+||| +++ ++.+... +| .|.+||+.... ...+. ..+...+..+.|+|++ ..|+.++.++.|.+||
T Consensus 41 ~~~Sp--Dg~~l~~~~~~------~g~~~l~~~d~~~g~--~~~lt-~~~~~~~~~~~~spdg-~~l~~~~~~~~l~~~d 108 (388)
T 3pe7_A 41 KCFTR--DGSKLLFGGAF------DGPWNYYLLDLNTQV--ATQLT-EGRGDNTFGGFLSPDD-DALFYVKDGRNLMRVD 108 (388)
T ss_dssp CCBCT--TSCEEEEEECT------TSSCEEEEEETTTCE--EEECC-CSSCBCSSSCEECTTS-SEEEEEETTTEEEEEE
T ss_pred ccCCC--CCCEEEEEEcC------CCCceEEEEeCCCCc--eEEee-eCCCCCccceEEcCCC-CEEEEEeCCCeEEEEE
Confidence 78999 455 4444432 44 58888887654 22221 1333344567899998 5888888889999999
Q ss_pred eCCCCCCCCceeeccCCcceEEEE--EecCCCCEEEE----------------------EcCCCEEEEEEcCCCceeEEe
Q 021121 90 TALPPTANPIRSLHEHTREVHSAD--YNPTRRDSFIT----------------------SSWDDTVKLWTVDRPTSVRTF 145 (317)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~l~~----------------------~~~dg~v~iwd~~~~~~~~~~ 145 (317)
+..+ +.......+...+.... ++|++. .++. ...+..|.+||+.+++... +
T Consensus 109 ~~~g---~~~~~~~~~~~~~~~~~~~~~~dg~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~-l 183 (388)
T 3pe7_A 109 LATL---EENVVYQVPAEWVGYGTWVANSDCT-KLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTV-I 183 (388)
T ss_dssp TTTC---CEEEEEECCTTEEEEEEEEECTTSS-EEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEE-E
T ss_pred CCCC---cceeeeechhhcccccceeECCCCC-eeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEE-e
Confidence 9875 33333444455454444 478887 5553 2345789999999886544 4
Q ss_pred eccccceEEEEEec-CCCCeEEEEeCC------CeEEEEeCCCCCceeeeccCc--cceEEEEecCCCCcEEEEEec-CC
Q 021121 146 KEHAYCVYNATWNP-RHSDVFCSASGD------CTLRIWDVREMGSTMIIPAHE--FEILACDWNKYDDCLIASASV-DK 215 (317)
Q Consensus 146 ~~~~~~v~~~~~~~-~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~--~~v~~i~~~~~~~~~l~~~~~-d~ 215 (317)
..+...+..+.|+| + ++.++....+ ..|.++|...++.. .+..+. ..+..++|+| +++.|+..+. ++
T Consensus 184 ~~~~~~~~~~~~sp~d-g~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~ 260 (388)
T 3pe7_A 184 LQENQWLGHPIYRPYD-DSTVAFCHEGPHDLVDARMWLINEDGTNMR-KVKTHAEGESCTHEFWVP-DGSALVYVSYLKG 260 (388)
T ss_dssp EEESSCEEEEEEETTE-EEEEEEEECSCTTTSSCSEEEEETTSCCCE-ESCCCCTTEEEEEEEECT-TSSCEEEEEEETT
T ss_pred ecCCccccccEECCCC-CCEEEEEEecCCCCCcceEEEEeCCCCceE-EeeeCCCCcccccceECC-CCCEEEEEecCCC
Confidence 44666789999999 8 6766665543 37888887765443 333333 3577899999 8886655443 22
Q ss_pred ----cEEEEEccCCCcc-EEEEecCCC---ceeEEEecCCCCeeEEee--------ecCCeEEEEecccccceeeeeecc
Q 021121 216 ----SIKIWDVRNYRVP-IAVLNGHGY---AVRKVKFSPHRRNLLASC--------SYDMTVCLWDFMVEDALVGRYDHH 279 (317)
Q Consensus 216 ----~i~v~d~~~~~~~-~~~~~~~~~---~v~~~~~~~~~~~~l~~~--------~~d~~i~vwd~~~~~~~~~~~~~~ 279 (317)
.|++||+.+++.. +..+.++.. ....++|+|+|+.++++. ..+..|.+||+.+++ ...+..+
T Consensus 261 ~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~--~~~l~~~ 338 (388)
T 3pe7_A 261 SPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGT--QHRVARH 338 (388)
T ss_dssp CCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTE--EEEEEEC
T ss_pred CCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCc--eEEeccc
Confidence 3999999887631 222222100 022347999999644433 456789999998865 2344445
Q ss_pred cc-----------eeEeEEEEeccCCeEEEeecCCcEEEEecCCCC
Q 021121 280 TE-----------FAVGVDMSVLVEGLLASTGWDELVYVWQQGMDP 314 (317)
Q Consensus 280 ~~-----------~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~ 314 (317)
.. .+..++|+|++..+++++..+|...+|.++..+
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l~~ 384 (388)
T 3pe7_A 339 DTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATLPE 384 (388)
T ss_dssp CCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCG
T ss_pred cCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEECCh
Confidence 44 578899999943444455568888888876543
No 162
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.89 E-value=5.7e-20 Score=152.20 Aligned_cols=243 Identities=8% Similarity=0.035 Sum_probs=161.4
Q ss_pred ceeEEEEecCCCCeEEEEEecccccccCceEEEEecC-CCCCcceeeeeecCCCCeeEEEecCCCCC-eEEEEE------
Q 021121 9 NGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLS-PAAPALTELVAFDTADGVYDLAWSESHDS-LLIAAV------ 80 (317)
Q Consensus 9 ~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~------ 80 (317)
.+..++|+| +++++++.+. + .|.+|++. ... +..+......+.+.+++|+|++.. +++++.
T Consensus 41 ~~~~~a~sp--dg~~l~~~~~------~-~v~~~~~~~~g~--~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~ 109 (365)
T 1jof_A 41 PISWMTFDH--ERKNIYGAAM------K-KWSSFAVKSPTE--IVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAV 109 (365)
T ss_dssp CCSEEEECT--TSSEEEEEEB------T-EEEEEEEEETTE--EEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCE
T ss_pred CCcEEEECC--CCCEEEEEcc------c-eEEEEEECCCCC--EEEeeEeecCCCCccEEECCCCCEEEEEEecCCccee
Confidence 577899999 5666666553 4 89999997 432 222222222234667999999843 344542
Q ss_pred -------cCCeEEEEEeCCCCCCCCceeec----cCCcceEEEEEecCCCCEEEEEc-CCCEEEEEEcC-CCcee--EEe
Q 021121 81 -------ADGSVKIYDTALPPTANPIRSLH----EHTREVHSADYNPTRRDSFITSS-WDDTVKLWTVD-RPTSV--RTF 145 (317)
Q Consensus 81 -------~dg~i~v~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~l~~~~-~dg~v~iwd~~-~~~~~--~~~ 145 (317)
.+|.+.+|++.... +....+. .+...+.+++|+|+|+ +++++. .++.|.+|+++ +++.. ..+
T Consensus 110 ~~~~~~~~~g~v~v~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~spdG~-~l~~~~~~~~~v~~~~~~~~g~~~~~~~~ 186 (365)
T 1jof_A 110 YANPFYKFAGYGNVFSVSETG--KLEKNVQNYEYQENTGIHGMVFDPTET-YLYSADLTANKLWTHRKLASGEVELVGSV 186 (365)
T ss_dssp EEEEESSSCCEEEEEEECTTC--CEEEEEEEEECCTTCCEEEEEECTTSS-EEEEEETTTTEEEEEEECTTSCEEEEEEE
T ss_pred ccceeecCCceEEEEccCCCC--cCcceEeeEEeCCCCcceEEEECCCCC-EEEEEcCCCCEEEEEEECCCCCEEEeeeE
Confidence 68999999997421 2222222 2456799999999998 666554 46899999998 66543 233
Q ss_pred e--ccccceEEEEEecCCCCeEEEEe-CCCeEEEEeCC--CCCce---eeec---c----Ccc------ceEEEE-ecCC
Q 021121 146 K--EHAYCVYNATWNPRHSDVFCSAS-GDCTLRIWDVR--EMGST---MIIP---A----HEF------EILACD-WNKY 203 (317)
Q Consensus 146 ~--~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~i~d~~--~~~~~---~~~~---~----~~~------~v~~i~-~~~~ 203 (317)
. .+...+..++|+|+ ++.+++++ .++.|.+|++. +++.. ..+. . +.. .+..++ |+|
T Consensus 187 ~~~~~g~~p~~~~~spd-g~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~sp- 264 (365)
T 1jof_A 187 DAPDPGDHPRWVAMHPT-GNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTF- 264 (365)
T ss_dssp ECSSTTCCEEEEEECTT-SSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECT-
T ss_pred ecCCCCCCCCEeEECCC-CCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECC-
Confidence 3 23556899999999 77766665 47899999865 44432 1121 1 121 478999 999
Q ss_pred CCcEEEEEecCC------cEEEEEcc-CCCccEE---EEecCCCceeEEEecC---CCCeeEEeeec-CCeEEEEecccc
Q 021121 204 DDCLIASASVDK------SIKIWDVR-NYRVPIA---VLNGHGYAVRKVKFSP---HRRNLLASCSY-DMTVCLWDFMVE 269 (317)
Q Consensus 204 ~~~~l~~~~~d~------~i~v~d~~-~~~~~~~---~~~~~~~~v~~~~~~~---~~~~~l~~~~~-d~~i~vwd~~~~ 269 (317)
++++|+++..+. .|.+|++. +++ ... ....+...+..++|+| +++ +|++++. ++.|++|++...
T Consensus 265 dG~~l~v~~~~~~~~~~~~i~v~~~~~~g~-~~~~~~~~~~~~~~~~~~a~sp~~~dg~-~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 265 SGKYMFASSRANKFELQGYIAGFKLRDCGS-IEKQLFLSPTPTSGGHSNAVSPCPWSDE-WMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp TSSEEEEEEEESSTTSCCEEEEEEECTTSC-EEEEEEEEECSSCCTTCCCEEECTTCTT-EEEEECSSSCEEEEEEEETT
T ss_pred CCCEEEEECCCCCCCCCCeEEEEEECCCCC-EEEeeeeeecCCCCcccceecCCCcCCC-EEEEEEcCCCeEEEEEEchh
Confidence 888877765432 89999996 333 222 2333555677899999 788 4666664 589999998765
No 163
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.88 E-value=5.2e-20 Score=164.26 Aligned_cols=282 Identities=13% Similarity=0.018 Sum_probs=179.9
Q ss_pred cCcceeEEEEecCCCCeEEEEEe-cccccccCceEEEEecCCCCCcceeeeeecCCCCee---------EEEec--CCCC
Q 021121 6 TPFNGYSVKFSPFYESRLAVATA-QNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVY---------DLAWS--ESHD 73 (317)
Q Consensus 6 ~~~~v~~~~~~p~~~~~~~~~~~-~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~---------~~~~~--~~~~ 73 (317)
+...+..++|++ +..+.+... . .++...||...... ....+ ..+...+. ...|+ ||++
T Consensus 22 ~~~~~~~~~~s~--~~~~~~~~~~~-----~~~~~~l~~~~~~~-~~~~l--~~~~~~~~~~~~~~~~~~~~~~~SPDg~ 91 (662)
T 3azo_A 22 RSGRPACVGAVG--DEVWWVAPRPA-----EAGRATLVRRRADG-AEESA--LPAPWNVRNRVFEYSGFPWAGVPRPAGG 91 (662)
T ss_dssp TCSCCEEEEEET--TEEEEEEEETT-----TTTEEEEEEECTTS-CEEES--SCTTCCBCCCGGGTCCCCEEEECCSSSS
T ss_pred cCCccceeEEcC--CeEEEEecCcc-----cCCcEEEEEECCCC-Cccee--CCCCccccccccccCCccceeeeecCCC
Confidence 456788999998 555555551 1 16788999874333 12222 23444444 55565 9985
Q ss_pred CeEEEEEc-CCeEEEEEeC--C-CCCCCCceeecc-----CCcceEEEEEecCCCCEEEEEcCC----------CEEEEE
Q 021121 74 SLLIAAVA-DGSVKIYDTA--L-PPTANPIRSLHE-----HTREVHSADYNPTRRDSFITSSWD----------DTVKLW 134 (317)
Q Consensus 74 ~~l~~~~~-dg~i~v~~~~--~-~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~l~~~~~d----------g~v~iw 134 (317)
.+|+.++. +..|.++++. . + ....+.. |...+..++|+|+|+ .|+.++.+ ..|++|
T Consensus 92 ~~la~~~~~~~~l~~~~~~~~g~~----~~~~l~~~~~~~~~~~~~~~~~spDg~-~l~~~~~~~~~~~~~~~~~~i~~~ 166 (662)
T 3azo_A 92 PLLVFTHFGDQRLYAFEPDAPGGA----VPRPLTPVSAVGGGLRWADPVLLPERG-EVWCMAEEFTGEGPSDVRRFLAAV 166 (662)
T ss_dssp CEEEEEBTTTCCEEEECTTSTTCC----CCEECSCCCCSTTCEEEEEEEEETTTT-EEEEEEEEECSSSTTCEEEEEEEE
T ss_pred eEEEEEECCCCeEEEEcCCCCCCC----CCEeccCCccCCCCccccCcEECCCCC-EEEEEEecccCCCCCCceeEEEEE
Confidence 41554443 4455555543 1 2 2223333 667889999999998 78777766 589999
Q ss_pred EcCC------CceeEEee-ccccceEEEEEecCCCCeEEEEeCC--------CeEEEEeCC-CC---CceeeeccCccce
Q 021121 135 TVDR------PTSVRTFK-EHAYCVYNATWNPRHSDVFCSASGD--------CTLRIWDVR-EM---GSTMIIPAHEFEI 195 (317)
Q Consensus 135 d~~~------~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~d--------g~i~i~d~~-~~---~~~~~~~~~~~~v 195 (317)
|+.+ ++ ...+. .+...+..++|+|+ ++.|+.++.+ ..|++||+. ++ +.......+...+
T Consensus 167 ~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~SpD-G~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~ 244 (662)
T 3azo_A 167 PLDGSAAADRSA-VRELSDDAHRFVTGPRLSPD-GRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAI 244 (662)
T ss_dssp ETTSTTTTCGGG-SEESSCSCSSEECCCEECTT-SSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCE
T ss_pred ECCCCccccCCc-eeEEEecCCCcccCceECCC-CCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceE
Confidence 9987 44 34555 55667888999999 7777766644 479999998 45 3333334456788
Q ss_pred EEEEecCCCCcEEEEEecCC--cEEEEEccCCCccEEEEecCCCc---------eeEEEecCCCCeeEEeeecCCeEEEE
Q 021121 196 LACDWNKYDDCLIASASVDK--SIKIWDVRNYRVPIAVLNGHGYA---------VRKVKFSPHRRNLLASCSYDMTVCLW 264 (317)
Q Consensus 196 ~~i~~~~~~~~~l~~~~~d~--~i~v~d~~~~~~~~~~~~~~~~~---------v~~~~~~~~~~~~l~~~~~d~~i~vw 264 (317)
..+.|+| ++++++++..++ .|.+||..+++ ...+..+... +..++|+|+++ +++++.. +.++||
T Consensus 245 ~~~~~sp-dg~l~~~~~~~~~~~l~~~~~~~~~--~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~-~~~~~~~-~~~~l~ 319 (662)
T 3azo_A 245 AQAEWAP-DGSLIVATDRTGWWNLHRVDPATGA--ATQLCRREEEFAGPLWTPGMRWFAPLANGL-IAVVHGK-GAAVLG 319 (662)
T ss_dssp EEEEECT-TSCEEEEECTTSSCEEEEECTTTCC--EEESSCCSSBSSCCCCSTTCCSEEECTTSC-EEEEEBS-SSCEEE
T ss_pred cceEECC-CCeEEEEECCCCCeEEEEEECCCCc--eeecccccccccCccccccCceEeEeCCCE-EEEEEEc-CccEEE
Confidence 9999999 888888888888 56666665543 2333322221 56789999988 7888888 999999
Q ss_pred ecccccceeeeeecccceeEeEEEEeccCCeE-EEeecCCcEEEEec
Q 021121 265 DFMVEDALVGRYDHHTEFAVGVDMSVLVEGLL-ASTGWDELVYVWQQ 310 (317)
Q Consensus 265 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~s~~~dg~i~~w~~ 310 (317)
.+.........+..|...+..+ ++++++.++ ++++.+....+|.+
T Consensus 320 ~~d~~~~~~~~l~~~~~~~~~~-~s~~~~~~~~~~~~~~~~~~i~~~ 365 (662)
T 3azo_A 320 ILDPESGELVDAAGPWTEWAAT-LTVSGTRAVGVAASPRTAYEVVEL 365 (662)
T ss_dssp EEETTTTEEEECCSSCCEEEEE-EEEETTEEEEEEEETTEEEEEEEE
T ss_pred EEECCCCcEEEecCCCCeEEEE-EecCCCEEEEEEcCCCCCCEEEEE
Confidence 5443222245667777777766 155534444 44455544444443
No 164
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.88 E-value=1.2e-19 Score=147.97 Aligned_cols=244 Identities=10% Similarity=0.072 Sum_probs=179.9
Q ss_pred CCCeeEEEecCCCCCeEEEEEcC------------------------CeEEEEEeCCCCCCCCceeec-cCCcceEEEEE
Q 021121 60 ADGVYDLAWSESHDSLLIAAVAD------------------------GSVKIYDTALPPTANPIRSLH-EHTREVHSADY 114 (317)
Q Consensus 60 ~~~v~~~~~~~~~~~~l~~~~~d------------------------g~i~v~~~~~~~~~~~~~~~~-~~~~~v~~~~~ 114 (317)
-..+.+++++|+| +++++...+ +.|.+||..++ +...... .+-.....+++
T Consensus 23 l~~v~~va~d~~G-~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g---~~~~~~~~~~~~~p~gia~ 98 (329)
T 3fvz_A 23 PGQVSGVALDSKN-NLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNA---EILQSSGKNLFYLPHGLSI 98 (329)
T ss_dssp CSCEEEEEECTTC-CEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTC---CEEEEECTTTCSSEEEEEE
T ss_pred cCCceEEEECCCC-CEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCC---eEEeccCCCccCCceEEEE
Confidence 3569999999998 577777666 46999997655 3333332 34457889999
Q ss_pred ecCCCCEEEEEcCCCEEEEEEcCCCc-eeEEee---------ccccceEEEEEecCCCCeEEEEe-CCCeEEEEeCCCCC
Q 021121 115 NPTRRDSFITSSWDDTVKLWTVDRPT-SVRTFK---------EHAYCVYNATWNPRHSDVFCSAS-GDCTLRIWDVREMG 183 (317)
Q Consensus 115 ~~~~~~~l~~~~~dg~v~iwd~~~~~-~~~~~~---------~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~ 183 (317)
+|++. ++++...++.|++||..... .+..+. .+-..+..++++|+++.++++.+ .++.|++|| .+++
T Consensus 99 d~~g~-l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~ 176 (329)
T 3fvz_A 99 DTDGN-YWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGK 176 (329)
T ss_dssp CTTSC-EEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSC
T ss_pred CCCCC-EEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCC
Confidence 99998 88888889999999986542 455552 23346899999995488888886 699999999 4566
Q ss_pred ceeeeccC----------ccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEE--ecCCCceeEEEecC-----
Q 021121 184 STMIIPAH----------EFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVL--NGHGYAVRKVKFSP----- 246 (317)
Q Consensus 184 ~~~~~~~~----------~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~--~~~~~~v~~~~~~~----- 246 (317)
.+..+... -.....++++|..+.++++...++.|++||..+++. +..+ ..+...+..++|+|
T Consensus 177 ~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~-~~~~~~~~~~~~~~~~~~~pg~~~~ 255 (329)
T 3fvz_A 177 FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEF-VREIKHASFGRNVFAISYIPGFLFA 255 (329)
T ss_dssp EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEECCTTTTTCEEEEEEETTEEEE
T ss_pred EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcE-EEEEeccccCCCcceeeecCCEEEE
Confidence 66655322 223789999993388888888899999999986553 5554 34566788999999
Q ss_pred -CCCeeEEeeecCCeEEEEecccccceeeee---ecccceeEeEEEEeccCCeEEEeecCCcEEEEecCCC
Q 021121 247 -HRRNLLASCSYDMTVCLWDFMVEDALVGRY---DHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGMD 313 (317)
Q Consensus 247 -~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~ 313 (317)
++. ++++...+..|++||..+++ ++..+ ..+...+.+++++|+ +.++++...++.|++|++...
T Consensus 256 ~~g~-~~v~~~~~~~v~~~~~~~g~-~~~~~~~~~~~~~~p~~ia~~~d-G~lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 256 VNGK-PYFGDQEPVQGFVMNFSSGE-IIDVFKPVRKHFDMPHDIVASED-GTVYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp EECC-CCTTCSCCCCEEEEETTTCC-EEEEECCSSSCCSSEEEEEECTT-SEEEEEESSSCCEEEEEEEEC
T ss_pred eCCC-EEeccCCCcEEEEEEcCCCe-EEEEEcCCCCccCCeeEEEECCC-CCEEEEECCCCEEEEEeCCcc
Confidence 332 22233345589999998876 44554 356667899999998 688888889999999998754
No 165
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.87 E-value=1.4e-19 Score=163.34 Aligned_cols=278 Identities=10% Similarity=0.115 Sum_probs=179.0
Q ss_pred ceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCC-----CeeEEEecCCCCCeEEEEEcC-
Q 021121 9 NGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTAD-----GVYDLAWSESHDSLLIAAVAD- 82 (317)
Q Consensus 9 ~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~l~~~~~d- 82 (317)
...+++|+| ++.++++. +|.|++||+.++.. ..+. ..+.. ....++||||| +.|+.++.+
T Consensus 18 ~~~~~~w~~--dg~~~~~~--------~~~i~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~Spdg-~~l~~~~~~~ 83 (740)
T 4a5s_A 18 KLYSLRWIS--DHEYLYKQ--------ENNILVFNAEYGNS--SVFL-ENSTFDEFGHSINDYSISPDG-QFILLEYNYV 83 (740)
T ss_dssp CCCCEEECS--SSEEEEEE--------TTEEEEEETTTCCE--EEEE-CTTTTTTCCSCCCEEEECTTS-SEEEEEEEEE
T ss_pred cccccEECC--CCcEEEEc--------CCcEEEEECCCCce--EEEE-echhhhhhcccccceEECCCC-CEEEEEECCe
Confidence 467899999 67777764 67999999987752 1221 12221 22447899998 577777765
Q ss_pred --------CeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEe-eccccce-
Q 021121 83 --------GSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTF-KEHAYCV- 152 (317)
Q Consensus 83 --------g~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~-~~~~~~v- 152 (317)
+.+.+||+.++ + ...+..|...+...+|+|||+ .|+.+. ++.|++|++.+++..+.. .++...+
T Consensus 84 ~~~r~~~~~~~~~~d~~~~---~-~~~l~~~~~~~~~~~~SPdG~-~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~ 157 (740)
T 4a5s_A 84 KQWRHSYTASYDIYDLNKR---Q-LITEERIPNNTQWVTWSPVGH-KLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIY 157 (740)
T ss_dssp ECSSSCEEEEEEEEETTTT---E-ECCSSCCCTTEEEEEECSSTT-CEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEE
T ss_pred eeEEEccceEEEEEECCCC---c-EEEcccCCCcceeeEECCCCC-EEEEEE-CCeEEEEECCCCceEEEcCCCCcccee
Confidence 56779999875 2 234556778899999999998 666664 689999999887654321 1222212
Q ss_pred ----------------EEEEEecCCCCeEEEEeCC------------------------------------CeEEEEeCC
Q 021121 153 ----------------YNATWNPRHSDVFCSASGD------------------------------------CTLRIWDVR 180 (317)
Q Consensus 153 ----------------~~~~~~~~~~~~l~~~~~d------------------------------------g~i~i~d~~ 180 (317)
..+.|+|+ ++.|+.++.| ..|++||+.
T Consensus 158 ~g~~~~v~~ee~~~~~~~~~wSpD-g~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~ 236 (740)
T 4a5s_A 158 NGITDWVYEEEVFSAYSALWWSPN-GTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTD 236 (740)
T ss_dssp ESBCCHHHHHHTSSSSBCEEECTT-SSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETT
T ss_pred cCcccccccchhcCCCcceEECCC-CCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECC
Confidence 34899999 7777766422 158889998
Q ss_pred C---CC--ceeeec------cCccceEEEEecCCCCcEEEEEec----CCcEEEEEccCCC-------ccEEEEecCCCc
Q 021121 181 E---MG--STMIIP------AHEFEILACDWNKYDDCLIASASV----DKSIKIWDVRNYR-------VPIAVLNGHGYA 238 (317)
Q Consensus 181 ~---~~--~~~~~~------~~~~~v~~i~~~~~~~~~l~~~~~----d~~i~v~d~~~~~-------~~~~~~~~~~~~ 238 (317)
+ ++ ....+. .+...+..++|+| +++.++.... +..|++||+.+++ ........|...
T Consensus 237 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wsp-dg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~ 315 (740)
T 4a5s_A 237 SLSSVTNATSIQITAPASMLIGDHYLCDVTWAT-QERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGW 315 (740)
T ss_dssp SCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEE-TTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSC
T ss_pred CCCCCCcceEEEecCCccCCCCCeEEEEEEEeC-CCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCce
Confidence 8 63 233333 2677799999999 8887666543 2369999998876 111112446555
Q ss_pred ee-----EEEecCCCCeeEEeee-cCC--eEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEeec----CCcEE
Q 021121 239 VR-----KVKFSPHRRNLLASCS-YDM--TVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGW----DELVY 306 (317)
Q Consensus 239 v~-----~~~~~~~~~~~l~~~~-~d~--~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~----dg~i~ 306 (317)
+. ...|+|+|+.+++..+ .+| .|.+||..+++ . ..+......+..+. .++++.+++++.. .+...
T Consensus 316 v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~-~-~~lT~g~~~v~~~~-~~d~~~i~f~~~~~~~~~~~~~ 392 (740)
T 4a5s_A 316 VGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKD-C-TFITKGTWEVIGIE-ALTSDYLYYISNEYKGMPGGRN 392 (740)
T ss_dssp SSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSS-C-EESCCSSSCEEEEE-EECSSEEEEEESCGGGCTTCBE
T ss_pred EccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCc-e-EecccCCEEEEEEE-EEeCCEEEEEEecCCCCCceeE
Confidence 54 7899999996442444 444 58888887654 2 23333344455543 3553445555544 34455
Q ss_pred EEecC
Q 021121 307 VWQQG 311 (317)
Q Consensus 307 ~w~~~ 311 (317)
+|.++
T Consensus 393 ly~v~ 397 (740)
T 4a5s_A 393 LYKIQ 397 (740)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 55554
No 166
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.87 E-value=7.2e-19 Score=140.58 Aligned_cols=237 Identities=9% Similarity=0.074 Sum_probs=171.6
Q ss_pred CCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeec------cCCcceEEEEEe-cCCCCEEEEEcC-CCEE
Q 021121 60 ADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLH------EHTREVHSADYN-PTRRDSFITSSW-DDTV 131 (317)
Q Consensus 60 ~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~------~~~~~v~~~~~~-~~~~~~l~~~~~-dg~v 131 (317)
-..+.++++++++ .++++...++.|.+||... .....+. .+...+..+++. +++. ++++... ++.|
T Consensus 29 ~~~p~~v~~~~~g-~l~v~~~~~~~i~~~d~~g----~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~-l~v~~~~~~~~i 102 (286)
T 1q7f_A 29 FTEPSGVAVNAQN-DIIVADTNNHRIQIFDKEG----RFKFQFGECGKRDSQLLYPNRVAVVRNSGD-IIVTERSPTHQI 102 (286)
T ss_dssp BSCEEEEEECTTC-CEEEEEGGGTEEEEECTTS----CEEEEECCBSSSTTCBSSEEEEEEETTTTE-EEEEECGGGCEE
T ss_pred cCCCceEEECCCC-CEEEEECCCCEEEEECCCC----cEEEEecccCCCcccccCceEEEEEcCCCe-EEEEcCCCCCEE
Confidence 3568899999998 5777778889999999652 2333332 244578899995 5654 5555533 8899
Q ss_pred EEEEcCCCceeEEeec-cccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeec--cCccceEEEEecCCCCcEE
Q 021121 132 KLWTVDRPTSVRTFKE-HAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIP--AHEFEILACDWNKYDDCLI 208 (317)
Q Consensus 132 ~iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~v~~i~~~~~~~~~l 208 (317)
.+|| .+++.+..+.. +...+..++++|+ ++++++...++.|.+||.. ++....+. .+...+..++++| +++++
T Consensus 103 ~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~-g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~-~g~l~ 178 (286)
T 1q7f_A 103 QIYN-QYGQFVRKFGATILQHPRGVTVDNK-GRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVND-KQEIF 178 (286)
T ss_dssp EEEC-TTSCEEEEECTTTCSCEEEEEECTT-SCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECS-SSEEE
T ss_pred EEEC-CCCcEEEEecCccCCCceEEEEeCC-CCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECC-CCCEE
Confidence 9999 56666666643 3356899999998 7788887788999999964 45555543 3344688999999 88888
Q ss_pred EEEecCCcEEEEEccCCCccEEEEecC--CCceeEEEecCCCCeeEEeeecCC-eEEEEecccccceeeeeeccc--cee
Q 021121 209 ASASVDKSIKIWDVRNYRVPIAVLNGH--GYAVRKVKFSPHRRNLLASCSYDM-TVCLWDFMVEDALVGRYDHHT--EFA 283 (317)
Q Consensus 209 ~~~~~d~~i~v~d~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~l~~~~~d~-~i~vwd~~~~~~~~~~~~~~~--~~v 283 (317)
++...++.|++||... + .+..+..+ ...+..++++|++. ++++...++ .|.+||.. ++ .+..+..+. ..+
T Consensus 179 v~~~~~~~i~~~~~~g-~-~~~~~~~~g~~~~p~~i~~d~~G~-l~v~~~~~~~~i~~~~~~-g~-~~~~~~~~~~~~~~ 253 (286)
T 1q7f_A 179 ISDNRAHCVKVFNYEG-Q-YLRQIGGEGITNYPIGVGINSNGE-ILIADNHNNFNLTIFTQD-GQ-LISALESKVKHAQC 253 (286)
T ss_dssp EEEGGGTEEEEEETTC-C-EEEEESCTTTSCSEEEEEECTTCC-EEEEECSSSCEEEEECTT-SC-EEEEEEESSCCSCE
T ss_pred EEECCCCEEEEEcCCC-C-EEEEEccCCccCCCcEEEECCCCC-EEEEeCCCCEEEEEECCC-CC-EEEEEcccCCCCcc
Confidence 8888889999999754 3 24445433 35788999999997 677776675 99999954 33 344444433 247
Q ss_pred EeEEEEeccCCeEEEeecCCcEEEEecCCC
Q 021121 284 VGVDMSVLVEGLLASTGWDELVYVWQQGMD 313 (317)
Q Consensus 284 ~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~ 313 (317)
.+++++|+ ++++++ +.|+.|++|++...
T Consensus 254 ~~i~~~~~-g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 254 FDVALMDD-GSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp EEEEEETT-TEEEEE-ETTTEEEEEECSCC
T ss_pred eeEEECCC-CcEEEE-CCCCeEEEEEcccc
Confidence 79999998 666666 57999999998654
No 167
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.86 E-value=5.8e-20 Score=153.64 Aligned_cols=278 Identities=9% Similarity=-0.007 Sum_probs=173.2
Q ss_pred eeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCC-eeEEEecCCCCCeEEEEEcCCeEEEE
Q 021121 10 GYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADG-VYDLAWSESHDSLLIAAVADGSVKIY 88 (317)
Q Consensus 10 v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~~dg~i~v~ 88 (317)
+.+++||| +++.++..... .++..|.+|++.... ...+ ...... ...+.|+|++ +.|+.++.++.|.+|
T Consensus 38 ~~~~~~Sp--dG~~l~~~~~~---~g~~~l~~~d~~~~~--~~~l--~~~~~~~~~~~~~spdg-~~l~~~~~~~~l~~~ 107 (396)
T 3c5m_A 38 FYQKCFTQ--DGKKLLFAGDF---DGNRNYYLLNLETQQ--AVQL--TEGKGDNTFGGFISTDE-RAFFYVKNELNLMKV 107 (396)
T ss_dssp TTSCCBCT--TSCEEEEEECT---TSSCEEEEEETTTTE--EEEC--CCSSCBCTTTCEECTTS-SEEEEEETTTEEEEE
T ss_pred eecCcCCC--CCCEEEEEEec---CCCceEEEEECCCCc--EEEe--ecCCCCccccceECCCC-CEEEEEEcCCcEEEE
Confidence 67789999 45544433321 014478888887653 2222 122333 3347899998 588888888899999
Q ss_pred EeCCCCCCCCceeeccCCcceEE-------------------EEEecCCCCEEEEE-----cCCCEEEEEEcCCCceeEE
Q 021121 89 DTALPPTANPIRSLHEHTREVHS-------------------ADYNPTRRDSFITS-----SWDDTVKLWTVDRPTSVRT 144 (317)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~v~~-------------------~~~~~~~~~~l~~~-----~~dg~v~iwd~~~~~~~~~ 144 (317)
++..+ +.......+...... +.|+|+++ .++.. ..+..|.+||+.+++....
T Consensus 108 d~~~~---~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~~~~~~~~l~~~d~~~g~~~~~ 183 (396)
T 3c5m_A 108 DLETL---EEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTS-WEKFAEFYHTNPTCRLIKVDIETGELEVI 183 (396)
T ss_dssp ETTTC---CEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCS-HHHHHHHHHTCCCEEEEEEETTTCCEEEE
T ss_pred ECCCC---CcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCc-ceeeeeeccCCCcceEEEEECCCCcEEee
Confidence 98765 222222223222222 34567766 44433 4567899999998876544
Q ss_pred eeccccceEEEEEec-CCCCeEEEEeCC------CeEEEEeCCCCCceeeeccC-ccceEEEEecCCCCcEEEEEecC--
Q 021121 145 FKEHAYCVYNATWNP-RHSDVFCSASGD------CTLRIWDVREMGSTMIIPAH-EFEILACDWNKYDDCLIASASVD-- 214 (317)
Q Consensus 145 ~~~~~~~v~~~~~~~-~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~-~~~v~~i~~~~~~~~~l~~~~~d-- 214 (317)
. .+...+..+.|+| + +..++..+.+ ..|.+||+..++........ ...+..++|+| +++.|+.++.+
T Consensus 184 ~-~~~~~~~~~~~sp~d-g~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~ 260 (396)
T 3c5m_A 184 H-QDTAWLGHPIYRPFD-DSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIP-DGSAMAYVSYFKG 260 (396)
T ss_dssp E-EESSCEEEEEEETTE-EEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECT-TSSCEEEEEEETT
T ss_pred c-cCCcccccceECCCC-CCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECC-CCCEEEEEecCCC
Confidence 4 4566789999999 5 6655554443 46889998765433332211 33578899999 88877666543
Q ss_pred ---CcEEEEEccCCCccEEEEecCCCceeEEEecC-CCCeeEEeee----------------cCCeEEEEecccccceee
Q 021121 215 ---KSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSP-HRRNLLASCS----------------YDMTVCLWDFMVEDALVG 274 (317)
Q Consensus 215 ---~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~----------------~d~~i~vwd~~~~~~~~~ 274 (317)
+.|++||+.+++. ..+..... .. +.|+| +++ +++.++ .++.|.+||+.+++. .
T Consensus 261 ~~~~~l~~~d~~~g~~--~~l~~~~~-~~-~~~s~~dg~-~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~--~ 333 (396)
T 3c5m_A 261 QTDRVIYKANPETLEN--EEVMVMPP-CS-HLMSNFDGS-LMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA--Q 333 (396)
T ss_dssp TCCEEEEEECTTTCCE--EEEEECCS-EE-EEEECSSSS-EEEEEECCC----------CCCCCCEEEEEETTTTBC--C
T ss_pred CccceEEEEECCCCCe--EEeeeCCC-CC-CCccCCCCc-eEEEecCCcceeeccccccccCCCCcEEEEecccCce--E
Confidence 4499999987653 22222222 33 89999 998 566543 347899999987652 2
Q ss_pred eeecccc-----------eeEeEEEEeccCCeEEEe-ecCCcEEEEecCC
Q 021121 275 RYDHHTE-----------FAVGVDMSVLVEGLLAST-GWDELVYVWQQGM 312 (317)
Q Consensus 275 ~~~~~~~-----------~v~~~~~~~~~~~~l~s~-~~dg~i~~w~~~~ 312 (317)
.+..+.. .+..++|+|+ ++.|+.+ ..++...+|.++.
T Consensus 334 ~l~~~~~~~~~~~~~~~~~~~~~~~s~d-g~~l~~~s~~~~~~~l~~~~~ 382 (396)
T 3c5m_A 334 KLCKHSTSWDVLDGDRQITHPHPSFTPN-DDGVLFTSDFEGVPAIYIADV 382 (396)
T ss_dssp EEEECCCCCCCBTTBSSTTCCCCEECTT-SSEEEEEECTTSSCEEEEEEC
T ss_pred EccCCCCccccccccccCCCCCceEccC-CCeEEEEecCCCCceEEEEEE
Confidence 3444443 2567899999 5555544 4566666666653
No 168
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.86 E-value=1.9e-18 Score=142.60 Aligned_cols=260 Identities=12% Similarity=0.044 Sum_probs=174.2
Q ss_pred cCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEE----------cCCeEEEEEeCCCCCCCCceeecc
Q 021121 35 GNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAV----------ADGSVKIYDTALPPTANPIRSLHE 104 (317)
Q Consensus 35 ~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~----------~dg~i~v~~~~~~~~~~~~~~~~~ 104 (317)
.++.|++||..+... +........- .++|+|++ ++++++. .++.|.+||..+. +.+..+..
T Consensus 29 ~d~~v~v~D~~t~~~----~~~i~~g~~p-~i~~spdg-~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~---~~~~~i~~ 99 (361)
T 2oiz_A 29 TESRVHVYDYTNGKF----LGMVPTAFNG-HVQVSNDG-KKIYTMTTYHERITRGKRSDVVEVWDADKL---TFEKEISL 99 (361)
T ss_dssp GGCEEEEEETTTCCE----EEEEECCEEE-EEEECTTS-SEEEEEEEEETTSSSSCEEEEEEEEETTTC---CEEEEEEE
T ss_pred ccCeEEEEECCCCeE----EEEecCCCCC-ceEECCCC-CEEEEEEecccccccCCCCCEEEEEECcCC---cEEEEEEc
Confidence 478999999876542 2222222233 89999998 4676665 3577999998754 44444332
Q ss_pred ------CCcceEEEEEecCCCCEEEEEcC--CCEEEEEEcCCCceeEE-eeccccceEEEEEecCCCCeEEEEeCCCeEE
Q 021121 105 ------HTREVHSADYNPTRRDSFITSSW--DDTVKLWTVDRPTSVRT-FKEHAYCVYNATWNPRHSDVFCSASGDCTLR 175 (317)
Q Consensus 105 ------~~~~v~~~~~~~~~~~~l~~~~~--dg~v~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 175 (317)
+......++++|+|+ +|+++.. ++.|.+||+.+++.+.. +.. .. ...+.+.|++...+++.+.||.+.
T Consensus 100 ~~~~~~~g~~p~~i~~spdg~-~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~-~~-~~~v~~~p~~~~~~~~~~~dg~~~ 176 (361)
T 2oiz_A 100 PPKRVQGLNYDGLFRQTTDGK-FIVLQNASPATSIGIVDVAKGDYVEDVTAA-AG-CWSVIPQPNRPRSFMTICGDGGLL 176 (361)
T ss_dssp CTTBCCBCCCGGGEEECTTSS-EEEEEEESSSEEEEEEETTTTEEEEEEGGG-TT-EEEEEECTTSSSEEEEEETTSSEE
T ss_pred CccccccCCCcceEEECCCCC-EEEEECCCCCCeEEEEECCCCcEEEEEecC-CC-cceeEEcCCCCeeEEEECCCCcEE
Confidence 224466789999998 7776653 68999999999988776 542 22 233667887667888999999999
Q ss_pred EEeCCC-CCcee------eeccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEE-EEecC----------CC
Q 021121 176 IWDVRE-MGSTM------IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIA-VLNGH----------GY 237 (317)
Q Consensus 176 i~d~~~-~~~~~------~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~-~~~~~----------~~ 237 (317)
+|++.. ++... .+.....+ ..+.++| ++..++..+.++.+.++|+......+. .+... ..
T Consensus 177 ~v~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~-~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~ 254 (361)
T 2oiz_A 177 TINLGEDGKVASQSRSKQMFSVKDDP-IFIAPAL-DKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPG 254 (361)
T ss_dssp EEEECTTSSEEEEEECCCCSCTTTSC-BCSCCEE-CSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEEC
T ss_pred EEEECCCCcEeeeccccceEcCCCCc-eEEEecc-cCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccC
Confidence 999865 33331 11112222 2333455 566666677889999999876442221 11100 01
Q ss_pred ceeEEEecCCCCeeEEeee----------cCCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEeecCCcEEE
Q 021121 238 AVRKVKFSPHRRNLLASCS----------YDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYV 307 (317)
Q Consensus 238 ~v~~~~~~~~~~~~l~~~~----------~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~ 307 (317)
....++|+|+++.++++.. ..+.|.+||+.+.+ .+..+..+. +.+++|+|+ +++|++++. +.|.+
T Consensus 255 g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~-~v~~i~~~~--p~~ia~spd-g~~l~v~n~-~~v~v 329 (361)
T 2oiz_A 255 GYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ-RVARIPGRD--ALSMTIDQQ-RNLMLTLDG-GNVNV 329 (361)
T ss_dssp CSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTE-EEEEEECTT--CCEEEEETT-TTEEEEECS-SCEEE
T ss_pred CeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCc-EEEEEecCC--eeEEEECCC-CCEEEEeCC-CeEEE
Confidence 1223789999886555443 13589999999887 566777666 899999999 678888776 99999
Q ss_pred EecCCC
Q 021121 308 WQQGMD 313 (317)
Q Consensus 308 w~~~~~ 313 (317)
||..+.
T Consensus 330 ~D~~t~ 335 (361)
T 2oiz_A 330 YDISQP 335 (361)
T ss_dssp EECSSS
T ss_pred EECCCC
Confidence 998875
No 169
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.86 E-value=6.7e-18 Score=137.69 Aligned_cols=249 Identities=12% Similarity=0.094 Sum_probs=177.7
Q ss_pred cceeEEEEecCCCCeEEEEEeccc------------------ccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEec
Q 021121 8 FNGYSVKFSPFYESRLAVATAQNF------------------GILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWS 69 (317)
Q Consensus 8 ~~v~~~~~~p~~~~~~~~~~~~~~------------------~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 69 (317)
..+.+++++| ++.++++..... ....++.|.+||..+.. +.......+-.....++++
T Consensus 24 ~~v~~va~d~--~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~--~~~~~~~~~~~~p~gia~d 99 (329)
T 3fvz_A 24 GQVSGVALDS--KNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAE--ILQSSGKNLFYLPHGLSID 99 (329)
T ss_dssp SCEEEEEECT--TCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCC--EEEEECTTTCSSEEEEEEC
T ss_pred CCceEEEECC--CCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCe--EEeccCCCccCCceEEEEC
Confidence 5688999999 577777765420 00112579999987654 2211111234578899999
Q ss_pred CCCCCeEEEEEcCCeEEEEEeCCCCCCCCceee---------ccCCcceEEEEEec-CCCCEEEEEc-CCCEEEEEEcCC
Q 021121 70 ESHDSLLIAAVADGSVKIYDTALPPTANPIRSL---------HEHTREVHSADYNP-TRRDSFITSS-WDDTVKLWTVDR 138 (317)
Q Consensus 70 ~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~---------~~~~~~v~~~~~~~-~~~~~l~~~~-~dg~v~iwd~~~ 138 (317)
|++ .++++...++.|++|+.... ...+..+ ..+-.....++++| ++. ++++.+ .++.|++|+ .+
T Consensus 100 ~~g-~l~v~d~~~~~v~~~~~~g~--~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~-lyv~d~~~~~~I~~~~-~~ 174 (329)
T 3fvz_A 100 TDG-NYWVTDVALHQVFKLDPHSK--EGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGA-VFVSDGYCNSRIVQFS-PS 174 (329)
T ss_dssp TTS-CEEEEETTTTEEEEECTTCS--SCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCC-EEEEECSSCCEEEEEC-TT
T ss_pred CCC-CEEEEECCCCEEEEEeCCCC--eEEEEEecccCCCCCCccccCCCcEEEEeCCCCe-EEEEeCCCCCeEEEEc-CC
Confidence 998 48888888899999997532 1133333 23445788999999 565 777776 689999999 45
Q ss_pred CceeEEeecc----------ccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeec--cCccceEEEEecCCCCc
Q 021121 139 PTSVRTFKEH----------AYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIP--AHEFEILACDWNKYDDC 206 (317)
Q Consensus 139 ~~~~~~~~~~----------~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~v~~i~~~~~~~~ 206 (317)
++.+..+... -..+..++++|+++.++++...++.|++||..+++.+..+. .+...+..++++| +.
T Consensus 175 g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p--g~ 252 (329)
T 3fvz_A 175 GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP--GF 252 (329)
T ss_dssp SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET--TE
T ss_pred CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC--CE
Confidence 6666666422 23489999999867788888889999999998888877763 3455688899988 33
Q ss_pred EEEEEe-------cCCcEEEEEccCCCccEEEE---ecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccc
Q 021121 207 LIASAS-------VDKSIKIWDVRNYRVPIAVL---NGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVE 269 (317)
Q Consensus 207 ~l~~~~-------~d~~i~v~d~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~ 269 (317)
.+.+.+ .+..|++||..+++. +..+ ..+...+..++++|+|. ++++...++.|++|++...
T Consensus 253 ~~~~~g~~~v~~~~~~~v~~~~~~~g~~-~~~~~~~~~~~~~p~~ia~~~dG~-lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 253 LFAVNGKPYFGDQEPVQGFVMNFSSGEI-IDVFKPVRKHFDMPHDIVASEDGT-VYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp EEEEECCCCTTCSCCCCEEEEETTTCCE-EEEECCSSSCCSSEEEEEECTTSE-EEEEESSSCCEEEEEEEEC
T ss_pred EEEeCCCEEeccCCCcEEEEEEcCCCeE-EEEEcCCCCccCCeeEEEECCCCC-EEEEECCCCEEEEEeCCcc
Confidence 333332 344899999988764 5555 35666789999999995 8888888999999997653
No 170
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.85 E-value=5.3e-17 Score=130.36 Aligned_cols=280 Identities=9% Similarity=-0.026 Sum_probs=189.4
Q ss_pred cceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeEEE
Q 021121 8 FNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKI 87 (317)
Q Consensus 8 ~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v 87 (317)
..+.+++++| ++.+.++... ++.|.+||.. .. ............+.++++.+++ .++++...++.|..
T Consensus 15 ~~~~~i~~d~--~g~l~v~~~~------~~~v~~~d~~-~~--~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~ 82 (299)
T 2z2n_A 15 TGPYGITVSD--KGKVWITQHK------ANMISCINLD-GK--ITEYPLPTPDAKVMCLTISSDG-EVWFTENAANKIGR 82 (299)
T ss_dssp CCEEEEEECT--TSCEEEEETT------TTEEEEECTT-CC--EEEEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEE
T ss_pred CCccceEECC--CCCEEEEecC------CCcEEEEcCC-CC--eEEecCCcccCceeeEEECCCC-CEEEeCCCCCeEEE
Confidence 5789999999 6777777654 6789999987 33 2222212245678999999987 46666655788999
Q ss_pred EEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEE-eeccccceEEEEEecCCCCeEE
Q 021121 88 YDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRT-FKEHAYCVYNATWNPRHSDVFC 166 (317)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~ 166 (317)
|+.. + . .....+......+.++++.+++. ++++...++.|.+||. +++.... .......+..+++.++ +.+.+
T Consensus 83 ~~~~-g-~-~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~-g~l~v 156 (299)
T 2z2n_A 83 ITKK-G-I-IKEYTLPNPDSAPYGITEGPNGD-IWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSD-NALWF 156 (299)
T ss_dssp ECTT-S-C-EEEEECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTT-SCEEE
T ss_pred ECCC-C-c-EEEEeCCCcCCCceeeEECCCCC-EEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCC-CCEEE
Confidence 9865 2 1 11111222455788999999887 7777777889999998 5544322 2223456899999998 77777
Q ss_pred EEeCCCeEEEEeCCCCCceee-eccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEecCCCceeEEEec
Q 021121 167 SASGDCTLRIWDVREMGSTMI-IPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFS 245 (317)
Q Consensus 167 ~~~~dg~i~i~d~~~~~~~~~-~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~ 245 (317)
+...++.|..||. +++.... .......+..+++++ +++++++...++.|.+||. +++........+...+.+++++
T Consensus 157 ~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~ 233 (299)
T 2z2n_A 157 TENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGN-DDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAG 233 (299)
T ss_dssp EETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECT-TSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEEC
T ss_pred EeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECC-CCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEEC
Confidence 7777889999998 5554332 233345678999999 7887777767889999998 5443222223345678999999
Q ss_pred CCCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEeecCCcEEEEecCCC
Q 021121 246 PHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGMD 313 (317)
Q Consensus 246 ~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~ 313 (317)
+++. ++++...++.|..||. +++........+...+.++++ ++ +.++++.. .+.+..++....
T Consensus 234 ~~g~-l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~-~~-g~l~v~~~-~~~l~~~~~~~~ 296 (299)
T 2z2n_A 234 AGID-LWFTEWGANKIGRLTS-NNIIEEYPIQIKSAEPHGICF-DG-ETIWFAME-CDKIGKLTLIKD 296 (299)
T ss_dssp STTC-EEEEETTTTEEEEEET-TTEEEEEECSSSSCCEEEEEE-CS-SCEEEEET-TTEEEEEEEC--
T ss_pred CCCC-EEEeccCCceEEEECC-CCceEEEeCCCCCCccceEEe-cC-CCEEEEec-CCcEEEEEcCcc
Confidence 9987 5666556789999998 333111112344567889999 65 56555554 566777776653
No 171
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.85 E-value=1.4e-19 Score=163.25 Aligned_cols=239 Identities=11% Similarity=0.130 Sum_probs=163.7
Q ss_pred CeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCc-----ceEEEEEecCCCCEEEEEcCC--------
Q 021121 62 GVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTR-----EVHSADYNPTRRDSFITSSWD-------- 128 (317)
Q Consensus 62 ~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~l~~~~~d-------- 128 (317)
....++|+|++ .+++++ |+.|++||+.++ +....+..|.. ....+.|+|||+ .|+.++.+
T Consensus 18 ~~~~~~w~~dg-~~~~~~--~~~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~Spdg~-~l~~~~~~~~~~r~~~ 90 (740)
T 4a5s_A 18 KLYSLRWISDH-EYLYKQ--ENNILVFNAEYG---NSSVFLENSTFDEFGHSINDYSISPDGQ-FILLEYNYVKQWRHSY 90 (740)
T ss_dssp CCCCEEECSSS-EEEEEE--TTEEEEEETTTC---CEEEEECTTTTTTCCSCCCEEEECTTSS-EEEEEEEEEECSSSCE
T ss_pred cccccEECCCC-cEEEEc--CCcEEEEECCCC---ceEEEEechhhhhhcccccceEECCCCC-EEEEEECCeeeEEEcc
Confidence 46689999998 577775 899999999876 33444555443 234588999998 78877765
Q ss_pred -CEEEEEEcCCCceeEEeeccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeee-ccCccce-----------
Q 021121 129 -DTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMII-PAHEFEI----------- 195 (317)
Q Consensus 129 -g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~v----------- 195 (317)
+.+.+||+.+++.. .+..+...+...+|+|+ ++.|+.+ .++.|++||+.+++..+.. .++...+
T Consensus 91 ~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPd-G~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~e 167 (740)
T 4a5s_A 91 TASYDIYDLNKRQLI-TEERIPNNTQWVTWSPV-GHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEE 167 (740)
T ss_dssp EEEEEEEETTTTEEC-CSSCCCTTEEEEEECSS-TTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHH
T ss_pred ceEEEEEECCCCcEE-EcccCCCcceeeEECCC-CCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccc
Confidence 66789999988754 45566778999999999 7777666 4689999999887654321 1222212
Q ss_pred ------EEEEecCCCCcEEEEEecCC------------------------------------cEEEEEccC---CCc-cE
Q 021121 196 ------LACDWNKYDDCLIASASVDK------------------------------------SIKIWDVRN---YRV-PI 229 (317)
Q Consensus 196 ------~~i~~~~~~~~~l~~~~~d~------------------------------------~i~v~d~~~---~~~-~~ 229 (317)
..+.|+| +++.|+.++.|. .|++||+.+ ++. ..
T Consensus 168 e~~~~~~~~~wSp-Dg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~ 246 (740)
T 4a5s_A 168 EVFSAYSALWWSP-NGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATS 246 (740)
T ss_dssp HTSSSSBCEEECT-TSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCE
T ss_pred hhcCCCcceEECC-CCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceE
Confidence 3589999 999888875332 478889887 531 12
Q ss_pred EEEe------cCCCceeEEEecCCCCeeEEeeec----CCeEEEEeccccc----ce-eeee--ecccceeE-----eEE
Q 021121 230 AVLN------GHGYAVRKVKFSPHRRNLLASCSY----DMTVCLWDFMVED----AL-VGRY--DHHTEFAV-----GVD 287 (317)
Q Consensus 230 ~~~~------~~~~~v~~~~~~~~~~~~l~~~~~----d~~i~vwd~~~~~----~~-~~~~--~~~~~~v~-----~~~ 287 (317)
..+. +|...+..++|+|+++ +++.... +..|.+||+.+++ +. ...+ ..|...+. ...
T Consensus 247 ~~l~~~~~~~~~~~~~~~~~wspdg~-~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~ 325 (740)
T 4a5s_A 247 IQITAPASMLIGDHYLCDVTWATQER-ISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPH 325 (740)
T ss_dssp EEECCCHHHHTSCEEEEEEEEEETTE-EEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCE
T ss_pred EEecCCccCCCCCeEEEEEEEeCCCe-EEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCce
Confidence 3333 2777899999999998 4554432 3379999998875 11 1122 44555444 789
Q ss_pred EEeccCCeEE-Eee-cCC--cEEEEecCCC
Q 021121 288 MSVLVEGLLA-STG-WDE--LVYVWQQGMD 313 (317)
Q Consensus 288 ~~~~~~~~l~-s~~-~dg--~i~~w~~~~~ 313 (317)
|+|+ ++.|+ ..+ .+| .|++|++...
T Consensus 326 fspD-G~~l~~~~s~~~G~~~l~~~~~~~~ 354 (740)
T 4a5s_A 326 FTLD-GNSFYKIISNEEGYRHICYFQIDKK 354 (740)
T ss_dssp ECTT-SSEEEEEEECTTSCEEEEEEETTCS
T ss_pred EcCC-CCEEEEEEEcCCCceEEEEEECCCC
Confidence 9999 55544 554 444 5777777653
No 172
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.85 E-value=2.2e-18 Score=143.79 Aligned_cols=239 Identities=12% Similarity=0.048 Sum_probs=157.6
Q ss_pred EEecCCCCCeEEEEEc-CCe--EEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCcee
Q 021121 66 LAWSESHDSLLIAAVA-DGS--VKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSV 142 (317)
Q Consensus 66 ~~~~~~~~~~l~~~~~-dg~--i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~ 142 (317)
.+|+|||. .|+.++. +|. |.+||+..+ +.......+...+..+.|+|+++ .|+.++.++.|++||+.+++..
T Consensus 41 ~~~SpDg~-~l~~~~~~~g~~~l~~~d~~~g---~~~~lt~~~~~~~~~~~~spdg~-~l~~~~~~~~l~~~d~~~g~~~ 115 (388)
T 3pe7_A 41 KCFTRDGS-KLLFGGAFDGPWNYYLLDLNTQ---VATQLTEGRGDNTFGGFLSPDDD-ALFYVKDGRNLMRVDLATLEEN 115 (388)
T ss_dssp CCBCTTSC-EEEEEECTTSSCEEEEEETTTC---EEEECCCSSCBCSSSCEECTTSS-EEEEEETTTEEEEEETTTCCEE
T ss_pred ccCCCCCC-EEEEEEcCCCCceEEEEeCCCC---ceEEeeeCCCCCccceEEcCCCC-EEEEEeCCCeEEEEECCCCcce
Confidence 78999995 6666666 674 777777654 44444445555555678999998 8888888899999999999877
Q ss_pred EEeeccccceEEEE--EecCCCCeEEEE----------------------eCCCeEEEEeCCCCCceeeeccCccceEEE
Q 021121 143 RTFKEHAYCVYNAT--WNPRHSDVFCSA----------------------SGDCTLRIWDVREMGSTMIIPAHEFEILAC 198 (317)
Q Consensus 143 ~~~~~~~~~v~~~~--~~~~~~~~l~~~----------------------~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i 198 (317)
..+..+...+.... ++|+ +..++.. ..+..|.+||+.+++... +..+...+..+
T Consensus 116 ~~~~~~~~~~~~~~~~~~~d-g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~-l~~~~~~~~~~ 193 (388)
T 3pe7_A 116 VVYQVPAEWVGYGTWVANSD-CTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTV-ILQENQWLGHP 193 (388)
T ss_dssp EEEECCTTEEEEEEEEECTT-SSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEE-EEEESSCEEEE
T ss_pred eeeechhhcccccceeECCC-CCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEE-eecCCcccccc
Confidence 66665555554444 4777 6666532 245789999999876543 44456678899
Q ss_pred EecCCCCcEEEEEecC------CcEEEEEccCCCccEEEEecCC--CceeEEEecCCCCeeEEeeecCC----eEEEEec
Q 021121 199 DWNKYDDCLIASASVD------KSIKIWDVRNYRVPIAVLNGHG--YAVRKVKFSPHRRNLLASCSYDM----TVCLWDF 266 (317)
Q Consensus 199 ~~~~~~~~~l~~~~~d------~~i~v~d~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~l~~~~~d~----~i~vwd~ 266 (317)
+|+|.+++.|+....+ ..|.++|..... ...+..+. ..+..++|+|+|+.+++.+..++ .|.+||+
T Consensus 194 ~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~--~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~ 271 (388)
T 3pe7_A 194 IYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN--MRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADP 271 (388)
T ss_dssp EEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC--CEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECT
T ss_pred EECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc--eEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEec
Confidence 9998556677666543 368888876543 33444343 35788999999996444444333 3999999
Q ss_pred ccccc-eeeeeecccce---eEeEEEEeccCCeEEEe--------ecCCcEEEEecCCC
Q 021121 267 MVEDA-LVGRYDHHTEF---AVGVDMSVLVEGLLAST--------GWDELVYVWQQGMD 313 (317)
Q Consensus 267 ~~~~~-~~~~~~~~~~~---v~~~~~~~~~~~~l~s~--------~~dg~i~~w~~~~~ 313 (317)
.+++. .+..+..+... ...+.|+|++..++++. ..+..|++||+...
T Consensus 272 ~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~ 330 (388)
T 3pe7_A 272 ETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNG 330 (388)
T ss_dssp TTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTT
T ss_pred CCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCC
Confidence 88762 22222221111 22347999944344332 45678999998764
No 173
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.85 E-value=1.1e-17 Score=133.77 Aligned_cols=238 Identities=11% Similarity=0.151 Sum_probs=168.1
Q ss_pred cceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeee----cCCCCeeEEEec-CCCCCeEEEEEc-
Q 021121 8 FNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAF----DTADGVYDLAWS-ESHDSLLIAAVA- 81 (317)
Q Consensus 8 ~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~----~~~~~v~~~~~~-~~~~~~l~~~~~- 81 (317)
..+.+++++| ++.+.++... ++.|.+||.+.. ....+... .+...+..+++. +++ .++++...
T Consensus 30 ~~p~~v~~~~--~g~l~v~~~~------~~~i~~~d~~g~--~~~~~~~~~~~~~~~~~p~~i~~~~~~g-~l~v~~~~~ 98 (286)
T 1q7f_A 30 TEPSGVAVNA--QNDIIVADTN------NHRIQIFDKEGR--FKFQFGECGKRDSQLLYPNRVAVVRNSG-DIIVTERSP 98 (286)
T ss_dssp SCEEEEEECT--TCCEEEEEGG------GTEEEEECTTSC--EEEEECCBSSSTTCBSSEEEEEEETTTT-EEEEEECGG
T ss_pred CCCceEEECC--CCCEEEEECC------CCEEEEECCCCc--EEEEecccCCCcccccCceEEEEEcCCC-eEEEEcCCC
Confidence 4678999999 5677777654 789999997632 12222111 123468899994 665 45555533
Q ss_pred CCeEEEEEeCCCCCCCCceeec-cCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEee--ccccceEEEEEe
Q 021121 82 DGSVKIYDTALPPTANPIRSLH-EHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFK--EHAYCVYNATWN 158 (317)
Q Consensus 82 dg~i~v~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~--~~~~~v~~~~~~ 158 (317)
++.|.+|+. .+ +.+..+. .+...+.+++++|++. ++++...++.|.+||.. ++....+. .+...+..++++
T Consensus 99 ~~~i~~~d~-~g---~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~ 172 (286)
T 1q7f_A 99 THQIQIYNQ-YG---QFVRKFGATILQHPRGVTVDNKGR-IIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVN 172 (286)
T ss_dssp GCEEEEECT-TS---CEEEEECTTTCSCEEEEEECTTSC-EEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEEC
T ss_pred CCEEEEECC-CC---cEEEEecCccCCCceEEEEeCCCC-EEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEEC
Confidence 789999993 33 3333332 3445789999999987 88888888999999964 55555554 234568999999
Q ss_pred cCCCCeEEEEeCCCeEEEEeCCCCCceeeeccC--ccceEEEEecCCCCcEEEEEecCC-cEEEEEccCCCccEEEEecC
Q 021121 159 PRHSDVFCSASGDCTLRIWDVREMGSTMIIPAH--EFEILACDWNKYDDCLIASASVDK-SIKIWDVRNYRVPIAVLNGH 235 (317)
Q Consensus 159 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~~~v~~i~~~~~~~~~l~~~~~d~-~i~v~d~~~~~~~~~~~~~~ 235 (317)
|+ ++++++...++.|++||.. ++.+..+... ...+..+++++ +++++++...++ .|.+||... + .+..+..+
T Consensus 173 ~~-g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~-~G~l~v~~~~~~~~i~~~~~~g-~-~~~~~~~~ 247 (286)
T 1q7f_A 173 DK-QEIFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINS-NGEILIADNHNNFNLTIFTQDG-Q-LISALESK 247 (286)
T ss_dssp SS-SEEEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECT-TCCEEEEECSSSCEEEEECTTS-C-EEEEEEES
T ss_pred CC-CCEEEEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECC-CCCEEEEeCCCCEEEEEECCCC-C-EEEEEccc
Confidence 98 7788777889999999974 4555555433 25678999999 888888887776 999999643 3 34454443
Q ss_pred C--CceeEEEecCCCCeeEEeeecCCeEEEEecccc
Q 021121 236 G--YAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVE 269 (317)
Q Consensus 236 ~--~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~ 269 (317)
. ..+.+++++|+++ ++++ +.++.|++|++...
T Consensus 248 ~~~~~~~~i~~~~~g~-l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 248 VKHAQCFDVALMDDGS-VVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp SCCSCEEEEEEETTTE-EEEE-ETTTEEEEEECSCC
T ss_pred CCCCcceeEEECCCCc-EEEE-CCCCeEEEEEcccc
Confidence 3 3477999999996 6666 57999999997654
No 174
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.84 E-value=5.3e-19 Score=145.20 Aligned_cols=235 Identities=11% Similarity=0.035 Sum_probs=154.9
Q ss_pred EEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCC-cceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeE
Q 021121 65 DLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHT-REVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVR 143 (317)
Q Consensus 65 ~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~ 143 (317)
.+++++++ .++++++.++.|.+||+.++ +....+..+. ..+..++|+|+++.+++++..++.|.+||+.+++...
T Consensus 4 g~~~~~~~-~~~v~~~~~~~v~~~d~~~~---~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~ 79 (349)
T 1jmx_B 4 GPALKAGH-EYMIVTNYPNNLHVVDVASD---TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTF 79 (349)
T ss_dssp CCCCCTTC-EEEEEEETTTEEEEEETTTT---EEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred cccccCCC-EEEEEeCCCCeEEEEECCCC---cEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEE
Confidence 35677776 68999999999999998765 4444444332 2577899999997455666788999999999988877
Q ss_pred Eeecc------ccceEEEEEecCCCCeEEEEeCC------------CeEEEEeCCCCCc---eeeeccCccceEEEEecC
Q 021121 144 TFKEH------AYCVYNATWNPRHSDVFCSASGD------------CTLRIWDVREMGS---TMIIPAHEFEILACDWNK 202 (317)
Q Consensus 144 ~~~~~------~~~v~~~~~~~~~~~~l~~~~~d------------g~i~i~d~~~~~~---~~~~~~~~~~v~~i~~~~ 202 (317)
.+... ...+..++|+|+ ++.+++++.+ +.|.+||+.+++. +..+. +...+.+++|+|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~spd-g~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~ 157 (349)
T 1jmx_B 80 HANLSSVPGEVGRSMYSFAISPD-GKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAAD 157 (349)
T ss_dssp EEESCCSTTEEEECSSCEEECTT-SSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECT
T ss_pred EEEcccccccccccccceEECCC-CCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECC
Confidence 66532 233788999999 7777777755 8999999987543 23333 334588899999
Q ss_pred CCCcEEEEEecCCcEEEEEccCCCccEEEEecCC-C-----------------------ceeEEEecCCCCeeEEeeecC
Q 021121 203 YDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHG-Y-----------------------AVRKVKFSPHRRNLLASCSYD 258 (317)
Q Consensus 203 ~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~-~-----------------------~v~~~~~~~~~~~~l~~~~~d 258 (317)
+++ +++++ +.|++||..+++. ...+..+. . ....+++++++..........
T Consensus 158 -dg~-l~~~~--~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 232 (349)
T 1jmx_B 158 -DGS-LYVAG--PDIYKMDVKTGKY-TVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLL 232 (349)
T ss_dssp -TSC-EEEES--SSEEEECTTTCCE-EEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEE
T ss_pred -CCc-EEEcc--CcEEEEeCCCCce-eccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccc
Confidence 888 55443 3499999988663 44443221 0 234466665543111111111
Q ss_pred CeEEEEecccccceeeeeecccceeEeEEEEe-ccCCeEEEeecCCcEEEEecCCC
Q 021121 259 MTVCLWDFMVEDALVGRYDHHTEFAVGVDMSV-LVEGLLASTGWDELVYVWQQGMD 313 (317)
Q Consensus 259 ~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~s~~~dg~i~~w~~~~~ 313 (317)
..+..+|..+++........+...+..++|+| + +++++++ ++.|.+||+...
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~d-g~~l~~~--~~~v~~~d~~~~ 285 (349)
T 1jmx_B 233 YGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKD-PNQIYGV--LNRLAKYDLKQR 285 (349)
T ss_dssp EEEEEEETTTCCEEEEEEEECSSCEEEEEECSSC-TTEEEEE--ESEEEEEETTTT
T ss_pred eeEEEEeccCCcEEecccccCCCcceeeEecCCC-CCEEEEE--cCeEEEEECccC
Confidence 12223555554432333334556788999999 8 6777777 889999998764
No 175
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.84 E-value=1.6e-17 Score=135.68 Aligned_cols=269 Identities=11% Similarity=0.058 Sum_probs=176.6
Q ss_pred CcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeEE
Q 021121 7 PFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVK 86 (317)
Q Consensus 7 ~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 86 (317)
...+.++.|+|. ...++.... ++.++.|.- . ... ....+...+.+++|+|++ .+++++..++.|.
T Consensus 5 ~~~~~~~~~~~~--~~~~~~~~~------~~~~~~~~~---~-~~~--~~~~~~~~~~~~~~~~~g-~l~~~~~~~~~i~ 69 (333)
T 2dg1_A 5 QQDLPTLFYSGK--SNSAVPIIS------ESELQTITA---E-PWL--EISKKGLQLEGLNFDRQG-QLFLLDVFEGNIF 69 (333)
T ss_dssp -CCCCBCCSCGG--GGCSSCCCC------GGGSCEEEC---E-EEE--EEESSCCCEEEEEECTTS-CEEEEETTTCEEE
T ss_pred ccccceeeecCC--ccceeEEee------cccCccccc---c-eeE--EEeccCccccCcEECCCC-CEEEEECCCCEEE
Confidence 345788999994 333332222 668888821 1 111 222455678999999998 4777788889999
Q ss_pred EEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCC----CEEEEEEcCCCceeEEee--ccccceEEEEEecC
Q 021121 87 IYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWD----DTVKLWTVDRPTSVRTFK--EHAYCVYNATWNPR 160 (317)
Q Consensus 87 v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d----g~v~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~ 160 (317)
+||...+ +.......+...+.+++++|++. ++++...+ +.|.+||.++++....+. .....+..++++|+
T Consensus 70 ~~d~~~~---~~~~~~~~~~~~~~~i~~~~dg~-l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~ 145 (333)
T 2dg1_A 70 KINPETK---EIKRPFVSHKANPAAIKIHKDGR-LFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSK 145 (333)
T ss_dssp EECTTTC---CEEEEEECSSSSEEEEEECTTSC-EEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTT
T ss_pred EEeCCCC---cEEEEeeCCCCCcceEEECCCCc-EEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCC
Confidence 9998654 32222224567899999999987 77776665 689999998776543332 23456899999998
Q ss_pred CCCeEEEEeC------CCeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEE-EEEecCCcEEEEEccCCCccEEE--
Q 021121 161 HSDVFCSASG------DCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLI-ASASVDKSIKIWDVRNYRVPIAV-- 231 (317)
Q Consensus 161 ~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l-~~~~~d~~i~v~d~~~~~~~~~~-- 231 (317)
++++++... .+.|..+|..+++... +......+..++|+| +++.+ ++...++.|.+||..........
T Consensus 146 -g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~i~~~~-dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~ 222 (333)
T 2dg1_A 146 -GGFYFTDFRGYSTNPLGGVYYVSPDFRTVTP-IIQNISVANGIALST-DEKVLWVTETTANRLHRIALEDDGVTIQPFG 222 (333)
T ss_dssp -SCEEEEECCCBTTBCCEEEEEECTTSCCEEE-EEEEESSEEEEEECT-TSSEEEEEEGGGTEEEEEEECTTSSSEEEEE
T ss_pred -CCEEEEeccccccCCCceEEEEeCCCCEEEE-eecCCCcccceEECC-CCCEEEEEeCCCCeEEEEEecCCCcCccccc
Confidence 777766553 3567777766544332 222334578899999 87744 55556789999999642211211
Q ss_pred ------EecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeecccc------eeEeEEEEeccCCeEEEe
Q 021121 232 ------LNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTE------FAVGVDMSVLVEGLLAST 299 (317)
Q Consensus 232 ------~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~------~v~~~~~~~~~~~~l~s~ 299 (317)
+.++ ..+..+++++++. ++++...++.|.+||.. ++ .+..+..+.. .+.+++|+|+ +..|+.+
T Consensus 223 ~~~~~~~~~~-~~~~~i~~d~~G~-l~v~~~~~~~v~~~d~~-g~-~~~~~~~~~~~~g~~~~~~~~~~~~d-g~~L~v~ 297 (333)
T 2dg1_A 223 ATIPYYFTGH-EGPDSCCIDSDDN-LYVAMYGQGRVLVFNKR-GY-PIGQILIPGRDEGHMLRSTHPQFIPG-TNQLIIC 297 (333)
T ss_dssp EEEEEECCSS-SEEEEEEEBTTCC-EEEEEETTTEEEEECTT-SC-EEEEEECTTGGGTCSCBCCEEEECTT-SCEEEEE
T ss_pred ceEEEecCCC-CCCCceEECCCCC-EEEEEcCCCEEEEECCC-CC-EEEEEEcCCCccccccCcceEEECCC-CCEEEEE
Confidence 1122 3678899999997 66666677899999984 33 3344443332 6889999988 5555544
Q ss_pred ecC
Q 021121 300 GWD 302 (317)
Q Consensus 300 ~~d 302 (317)
+.+
T Consensus 298 ~~~ 300 (333)
T 2dg1_A 298 SND 300 (333)
T ss_dssp EEC
T ss_pred eCc
Confidence 444
No 176
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.83 E-value=2.1e-17 Score=135.73 Aligned_cols=265 Identities=9% Similarity=0.076 Sum_probs=169.1
Q ss_pred cceeEEEEecCCCCeEEEEEeccc--ccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcC---
Q 021121 8 FNGYSVKFSPFYESRLAVATAQNF--GILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVAD--- 82 (317)
Q Consensus 8 ~~v~~~~~~p~~~~~~~~~~~~~~--~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d--- 82 (317)
..+...++ + ...++....... ....++.|.+|++.... ...+ ..+..++|+|+|. .|+..+.+
T Consensus 15 ~~~~~~~~--d-G~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~--~~~l------~~~~~~~~SpDg~-~la~~~~~~~~ 82 (347)
T 2gop_A 15 AYLSDPRT--K-GELVAYVLTKANLKDNKYENTIVIENLKNNA--RRFI------ENATMPRISPDGK-KIAFMRANEEK 82 (347)
T ss_dssp CEEEEEEE--E-TTEEEEEEEEEETTTTEEEEEEEEEETTTCC--EEEE------ESCEEEEECTTSS-EEEEEEEETTT
T ss_pred EEcccceE--C-CcEEEEEEeecCcccCCccceEEEEeCCCCc--eEEc------ccCCCeEECCCCC-EEEEEEeccCC
Confidence 44566777 3 455555432110 00125689999988754 2222 4688899999995 66665543
Q ss_pred Ce--EEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcC---------------------------CCEEEE
Q 021121 83 GS--VKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSW---------------------------DDTVKL 133 (317)
Q Consensus 83 g~--i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~---------------------------dg~v~i 133 (317)
+. |.+|++..+ +... +..+.. +..+.|+|+++ .|+.++. ...|.+
T Consensus 83 ~~~~l~~~~~~~g---~~~~-l~~~~~-~~~~~wspdg~-~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~ 156 (347)
T 2gop_A 83 KVSEIWVADLETL---SSKK-ILEAKN-IRSLEWNEDSR-KLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWI 156 (347)
T ss_dssp TEEEEEEEETTTT---EEEE-EEEESE-EEEEEECTTSS-EEEEEEECCCC---------CCCC---------CEEEEEE
T ss_pred CcceEEEEECCCC---ceEE-EEcCCC-ccceeECCCCC-EEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEE
Confidence 44 666666543 3222 222334 89999999998 6666543 257999
Q ss_pred EEcCCCceeEEeeccccceEEEEEecCCCCeEEEEeCCC-------eEEEEeCCCCCceeeeccCccceEEEEecCCCCc
Q 021121 134 WTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDC-------TLRIWDVREMGSTMIIPAHEFEILACDWNKYDDC 206 (317)
Q Consensus 134 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg-------~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~ 206 (317)
||+.+++.+..+.. . .+..+.|+|+ + +++++..++ ...+|.+.+++ ...+..+ ..+..+ +| +++
T Consensus 157 ~d~~~~~~~~~l~~-~-~~~~~~~spd-g-~~~~~~~~~~~~~~~~~~~l~~~d~~~-~~~l~~~-~~~~~~--sp-dg~ 227 (347)
T 2gop_A 157 FDTESEEVIEEFEK-P-RFSSGIWHRD-K-IVVNVPHREIIPQYFKFWDIYIWEDGK-EEKMFEK-VSFYAV--DS-DGE 227 (347)
T ss_dssp EETTTTEEEEEEEE-E-TTCEEEEETT-E-EEEEEECCCSSCCSSCCEEEEEEETTE-EEEEEEE-ESEEEE--EE-CSS
T ss_pred EECCCCeEEeeecC-C-CcccccCCCC-e-EEEEEecccccccccccccEEEeCCCc-eEEeccC-cceeeE--CC-CCC
Confidence 99998876455554 4 7889999999 5 777775542 33444443433 3344334 444444 88 888
Q ss_pred EEEEEecC--------CcEEEEEccCCCccEEEEecCCCceeE-EEecCCCCeeEEeeecCCeEEEEecccccceeeeee
Q 021121 207 LIASASVD--------KSIKIWDVRNYRVPIAVLNGHGYAVRK-VKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYD 277 (317)
Q Consensus 207 ~l~~~~~d--------~~i~v~d~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~ 277 (317)
.|+.++.+ ..|.+|| +++ .......+...+.. +.|+ ++ ++++++.++.++|| +.+++ . ..+.
T Consensus 228 ~l~~~~~~~~~~~~~~~~l~~~d--~~~-~~~l~~~~~~~~~~~~~~s-dg--~~~~~~~~~~~~l~-~~~g~-~-~~~~ 298 (347)
T 2gop_A 228 RILLYGKPEKKYMSEHNKLYIYD--GKE-VMGILDEVDRGVGQAKIKD-GK--VYFTLFEEGSVNLY-IWDGE-I-KPIA 298 (347)
T ss_dssp CEEEEECCSSSCCCSSCEEEEEC--SSC-EEESSTTCCSEEEEEEEET-TE--EEEEEEETTEEEEE-EESSS-E-EEEE
T ss_pred EEEEEEccccCCccccceEEEEC--CCc-eEeccccCCcccCCccEEc-Cc--EEEEEecCCcEEEE-EcCCc-e-EEEe
Confidence 87776644 3688888 333 23333455677886 8999 76 78889999999999 88443 3 3344
Q ss_pred cccceeEeEEEEeccCCeEEEeecCCcE-EEEecC
Q 021121 278 HHTEFAVGVDMSVLVEGLLASTGWDELV-YVWQQG 311 (317)
Q Consensus 278 ~~~~~v~~~~~~~~~~~~l~s~~~dg~i-~~w~~~ 311 (317)
.+...|.+++|+| .++++++.++.. .+|.++
T Consensus 299 ~~~~~v~~~~~s~---~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 299 KGRHWIMGFDVDE---IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp CSSSEEEEEEESS---SEEEEEECSSSCCEEEEES
T ss_pred cCCCeEEeeeeeC---cEEEEEcCCCChHHheEeC
Confidence 4577899999987 577777766654 777664
No 177
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.83 E-value=2.9e-18 Score=152.95 Aligned_cols=243 Identities=10% Similarity=-0.008 Sum_probs=169.5
Q ss_pred cCCCCeeEEEecCCCCCeEEEE--EcCCeEEEEEeCCCCCCCCceeeccCCcceE---------EEEEe--cCCCC-EEE
Q 021121 58 DTADGVYDLAWSESHDSLLIAA--VADGSVKIYDTALPPTANPIRSLHEHTREVH---------SADYN--PTRRD-SFI 123 (317)
Q Consensus 58 ~~~~~v~~~~~~~~~~~~l~~~--~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~---------~~~~~--~~~~~-~l~ 123 (317)
.|...+..++|+++. .+++.. +.++...||....+ .....+..+...+. ...|+ ||++. +++
T Consensus 21 ~~~~~~~~~~~s~~~-~~~~~~~~~~~~~~~l~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~ 96 (662)
T 3azo_A 21 SRSGRPACVGAVGDE-VWWVAPRPAEAGRATLVRRRAD---GAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVF 96 (662)
T ss_dssp HTCSCCEEEEEETTE-EEEEEEETTTTTEEEEEEECTT---SCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEE
T ss_pred hcCCccceeEEcCCe-EEEEecCcccCCcEEEEEECCC---CCcceeCCCCccccccccccCCccceeeeecCCCeEEEE
Confidence 577889999999874 345555 44788999997433 33444555555555 56666 99984 344
Q ss_pred EEcCCCEEEEEEcC--CCceeEEeec-----cccceEEEEEecCCCCeEEEEeCC----------CeEEEEeCCC-----
Q 021121 124 TSSWDDTVKLWTVD--RPTSVRTFKE-----HAYCVYNATWNPRHSDVFCSASGD----------CTLRIWDVRE----- 181 (317)
Q Consensus 124 ~~~~dg~v~iwd~~--~~~~~~~~~~-----~~~~v~~~~~~~~~~~~l~~~~~d----------g~i~i~d~~~----- 181 (317)
+...+..|.++++. .......+.. +...+..++|+|+ ++.|+.++.+ ..|++||+.+
T Consensus 97 ~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spD-g~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 175 (662)
T 3azo_A 97 THFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPE-RGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAAD 175 (662)
T ss_dssp EBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETT-TTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTC
T ss_pred EECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCC-CCEEEEEEecccCCCCCCceeEEEEEECCCCcccc
Confidence 44446778888776 2033445554 5677899999999 7888777766 5899999987
Q ss_pred -CCceeeec-cCccceEEEEecCCCCcEEEEEecC--------CcEEEEEcc-CCC--ccEEEEecCCCceeEEEecCCC
Q 021121 182 -MGSTMIIP-AHEFEILACDWNKYDDCLIASASVD--------KSIKIWDVR-NYR--VPIAVLNGHGYAVRKVKFSPHR 248 (317)
Q Consensus 182 -~~~~~~~~-~~~~~v~~i~~~~~~~~~l~~~~~d--------~~i~v~d~~-~~~--~~~~~~~~~~~~v~~~~~~~~~ 248 (317)
++. ..+. .+...+..++|+| +++.|+.++.+ ..|++||+. ++. ........+...+..+.|+|+|
T Consensus 176 ~~~~-~~l~~~~~~~~~~~~~Sp-DG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg 253 (662)
T 3azo_A 176 RSAV-RELSDDAHRFVTGPRLSP-DGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDG 253 (662)
T ss_dssp GGGS-EESSCSCSSEECCCEECT-TSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTS
T ss_pred CCce-eEEEecCCCcccCceECC-CCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCC
Confidence 443 4444 4556788899999 99999887755 379999998 441 2233444556789999999999
Q ss_pred CeeEEeeecCC--eEEEEecccccceeeeeecccce--------eEeEEEEeccCCeEEEeecCCcEEEEecC
Q 021121 249 RNLLASCSYDM--TVCLWDFMVEDALVGRYDHHTEF--------AVGVDMSVLVEGLLASTGWDELVYVWQQG 311 (317)
Q Consensus 249 ~~~l~~~~~d~--~i~vwd~~~~~~~~~~~~~~~~~--------v~~~~~~~~~~~~l~s~~~dg~i~~w~~~ 311 (317)
+ ++++++.++ .|.+||+.+++ .......+... +..++|+|+ +.++++++. +.+++|.++
T Consensus 254 ~-l~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~~p~w~~~~~~~~~~~~-~~~~~~~~~-~~~~l~~~d 322 (662)
T 3azo_A 254 S-LIVATDRTGWWNLHRVDPATGA-ATQLCRREEEFAGPLWTPGMRWFAPLAN-GLIAVVHGK-GAAVLGILD 322 (662)
T ss_dssp C-EEEEECTTSSCEEEEECTTTCC-EEESSCCSSBSSCCCCSTTCCSEEECTT-SCEEEEEBS-SSCEEEEEE
T ss_pred e-EEEEECCCCCeEEEEEECCCCc-eeecccccccccCccccccCceEeEeCC-CEEEEEEEc-CccEEEEEE
Confidence 9 788888888 56666665554 22222222222 567888887 788889888 999999554
No 178
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.82 E-value=7.4e-17 Score=129.52 Aligned_cols=229 Identities=8% Similarity=-0.071 Sum_probs=163.7
Q ss_pred cCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcC
Q 021121 58 DTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVD 137 (317)
Q Consensus 58 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~ 137 (317)
.......+++|+|+++.+++++..++.|..|+...+ ...+..+...+.++++++++. ++++...++.|.+||..
T Consensus 25 ~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-----~~~~~~~~~~~~~l~~~~dg~-l~v~~~~~~~i~~~d~~ 98 (296)
T 3e5z_A 25 DGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-----LSPEMHPSHHQNGHCLNKQGH-LIACSHGLRRLERQREP 98 (296)
T ss_dssp CCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-----EEEEESSCSSEEEEEECTTCC-EEEEETTTTEEEEECST
T ss_pred cCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-----eEEEECCCCCcceeeECCCCc-EEEEecCCCeEEEEcCC
Confidence 345567899999998548888888999999997642 445556677899999999998 77777777999999998
Q ss_pred CCceeEEeecc----ccceEEEEEecCCCCeEEEE----e-------------CCCeEEEEeCCCCCceeeeccCccceE
Q 021121 138 RPTSVRTFKEH----AYCVYNATWNPRHSDVFCSA----S-------------GDCTLRIWDVREMGSTMIIPAHEFEIL 196 (317)
Q Consensus 138 ~~~~~~~~~~~----~~~v~~~~~~~~~~~~l~~~----~-------------~dg~i~i~d~~~~~~~~~~~~~~~~v~ 196 (317)
+++........ ...+..++++|+ ++++++. + ..+.|..++.. ++ ...+..+.....
T Consensus 99 ~g~~~~~~~~~~~~~~~~~~~i~~d~~-G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~~~~~ 175 (296)
T 3e5z_A 99 GGEWESIADSFEGKKLNSPNDVCLAPD-GSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPIRDRVKPN 175 (296)
T ss_dssp TCCEEEEECEETTEECCCCCCEEECTT-SCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEECCCSSEE
T ss_pred CCcEEEEeeccCCCCCCCCCCEEECCC-CCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEeecCCCCCc
Confidence 87754433221 124678999998 7887763 2 13466667655 33 344444556678
Q ss_pred EEEecCCCCcEEEEEecCCcEEEEEccCCCcc---EEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEeccccccee
Q 021121 197 ACDWNKYDDCLIASASVDKSIKIWDVRNYRVP---IAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALV 273 (317)
Q Consensus 197 ~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~ 273 (317)
.++|+| +++.+++.+.++.|.+||+...... ...+..+...+..++++++|. ++++. ++.|.+||.. ++ .+
T Consensus 176 gi~~s~-dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~--~~~v~~~~~~-g~-~~ 249 (296)
T 3e5z_A 176 GLAFLP-SGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGL-IWASA--GDGVHVLTPD-GD-EL 249 (296)
T ss_dssp EEEECT-TSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSC-EEEEE--TTEEEEECTT-SC-EE
T ss_pred cEEECC-CCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCC-EEEEc--CCeEEEECCC-CC-EE
Confidence 999999 8888877777899999998732221 122233455678899999997 45544 7889999986 43 45
Q ss_pred eeeecccceeEeEEEE-eccCCeEEEeecCC
Q 021121 274 GRYDHHTEFAVGVDMS-VLVEGLLASTGWDE 303 (317)
Q Consensus 274 ~~~~~~~~~v~~~~~~-~~~~~~l~s~~~dg 303 (317)
..+..+.. +.+++|. |+ ++.|+.++.++
T Consensus 250 ~~~~~~~~-~~~~~f~~~d-~~~L~v~t~~~ 278 (296)
T 3e5z_A 250 GRVLTPQT-TSNLCFGGPE-GRTLYMTVSTE 278 (296)
T ss_dssp EEEECSSC-CCEEEEESTT-SCEEEEEETTE
T ss_pred EEEECCCC-ceeEEEECCC-CCEEEEEcCCe
Confidence 56666666 8999995 66 66777777664
No 179
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.82 E-value=1.4e-17 Score=131.91 Aligned_cols=241 Identities=5% Similarity=-0.051 Sum_probs=168.5
Q ss_pred CeeEEEecCCCCCeEE-EEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCc
Q 021121 62 GVYDLAWSESHDSLLI-AAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPT 140 (317)
Q Consensus 62 ~v~~~~~~~~~~~~l~-~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~ 140 (317)
...++++++++ .+++ +...++.|.+|+.... ........+...+.++++.+++. ++++.. ++.|.+||.....
T Consensus 25 ~p~~i~~~~~g-~l~v~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~-~~~i~~~d~~~~~ 98 (270)
T 1rwi_B 25 SPSGVAVDSAG-NVYVTSEGMYGRVVKLATGST---GTTVLPFNGLYQPQGLAVDGAGT-VYVTDF-NNRVVTLAAGSNN 98 (270)
T ss_dssp CEEEEEECTTC-CEEEEECSSSCEEEEECC--------EECCCCSCCSCCCEEECTTCC-EEEEET-TTEEEEECTTCSC
T ss_pred CccceEECCCC-CEEEEccCCCCcEEEecCCCc---ccceEeeCCcCCcceeEECCCCC-EEEEcC-CCEEEEEeCCCce
Confidence 67889999998 4666 4467789999986543 11111122335678899999987 666666 8899999987654
Q ss_pred eeEEee-ccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEecCCcEEE
Q 021121 141 SVRTFK-EHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKI 219 (317)
Q Consensus 141 ~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v 219 (317)
. ..+. .....+..+++.++ ++++++...++.|.+|+..+.............+..+++++ +++++++...++.|.+
T Consensus 99 ~-~~~~~~~~~~p~~i~~~~~-g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~-~g~l~v~~~~~~~i~~ 175 (270)
T 1rwi_B 99 Q-TVLPFDGLNYPEGLAVDTQ-GAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDN-SGNVYVTDTDNNRVVK 175 (270)
T ss_dssp C-EECCCCSCSSEEEEEECTT-CCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECT-TCCEEEEEGGGTEEEE
T ss_pred E-eeeecCCcCCCcceEECCC-CCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeC-CCCEEEEECCCCEEEE
Confidence 3 3332 22356899999998 77887777788999998665443332222334578899999 8888877777889999
Q ss_pred EEccCCCccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEe
Q 021121 220 WDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLAST 299 (317)
Q Consensus 220 ~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~ 299 (317)
||...... ......+...+..+++++++. ++++...++.|.+|+....... .....+...+.+++++++ +.++++.
T Consensus 176 ~~~~~~~~-~~~~~~~~~~p~~i~~d~~g~-l~v~~~~~~~v~~~~~~~~~~~-~~~~~~~~~p~~i~~~~~-g~l~v~~ 251 (270)
T 1rwi_B 176 LEAESNNQ-VVLPFTDITAPWGIAVDEAGT-VYVTEHNTNQVVKLLAGSTTST-VLPFTGLNTPLAVAVDSD-RTVYVAD 251 (270)
T ss_dssp ECTTTCCE-EECCCSSCCSEEEEEECTTCC-EEEEETTTSCEEEECTTCSCCE-ECCCCSCSCEEEEEECTT-CCEEEEE
T ss_pred EecCCCce-EeecccCCCCceEEEECCCCC-EEEEECCCCcEEEEcCCCCcce-eeccCCCCCceeEEECCC-CCEEEEE
Confidence 99876542 222222335688999999985 6777667889999998765422 222223356889999998 6788888
Q ss_pred ecCCcEEEEecCCCCC
Q 021121 300 GWDELVYVWQQGMDPR 315 (317)
Q Consensus 300 ~~dg~i~~w~~~~~~~ 315 (317)
..++.|+++++..+++
T Consensus 252 ~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 252 RGNDRVVKLTSLEHHH 267 (270)
T ss_dssp GGGTEEEEECCCGGGS
T ss_pred CCCCEEEEEcCCCccc
Confidence 8999999999987653
No 180
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.81 E-value=5e-17 Score=134.08 Aligned_cols=263 Identities=12% Similarity=0.002 Sum_probs=169.9
Q ss_pred EEEEecCCCCeEEEEEeccccc----ccCceEEEEecCCCCCcceeeeeec----CCCCeeEEEecCCCCCeEEEEEc--
Q 021121 12 SVKFSPFYESRLAVATAQNFGI----LGNGRVHVLDLSPAAPALTELVAFD----TADGVYDLAWSESHDSLLIAAVA-- 81 (317)
Q Consensus 12 ~~~~~p~~~~~~~~~~~~~~~~----~~~g~i~i~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~l~~~~~-- 81 (317)
.++|+| +++++......... ..++.|.+||...... ...+.... +......++++|++ ++|+++..
T Consensus 54 ~i~~sp--dg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~-~~~i~~~~~~~~~g~~p~~i~~spdg-~~l~v~n~~~ 129 (361)
T 2oiz_A 54 HVQVSN--DGKKIYTMTTYHERITRGKRSDVVEVWDADKLTF-EKEISLPPKRVQGLNYDGLFRQTTDG-KFIVLQNASP 129 (361)
T ss_dssp EEEECT--TSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCE-EEEEEECTTBCCBCCCGGGEEECTTS-SEEEEEEESS
T ss_pred ceEECC--CCCEEEEEEecccccccCCCCCEEEEEECcCCcE-EEEEEcCccccccCCCcceEEECCCC-CEEEEECCCC
Confidence 799999 55555554321000 0156799999875441 22222111 23457789999998 47776653
Q ss_pred CCeEEEEEeCCCCCCCCcee-eccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCC-CceeEEe------eccccceE
Q 021121 82 DGSVKIYDTALPPTANPIRS-LHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDR-PTSVRTF------KEHAYCVY 153 (317)
Q Consensus 82 dg~i~v~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~-~~~~~~~------~~~~~~v~ 153 (317)
++.|.+||+... +.+.. +.. .....+.+.|++...+++.+.||.+.+|+++. ++..... .....+ .
T Consensus 130 ~~~v~v~d~~~~---~~~~~~i~~--~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~-~ 203 (361)
T 2oiz_A 130 ATSIGIVDVAKG---DYVEDVTAA--AGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDP-I 203 (361)
T ss_dssp SEEEEEEETTTT---EEEEEEGGG--TTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSC-B
T ss_pred CCeEEEEECCCC---cEEEEEecC--CCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCc-e
Confidence 589999999865 44444 332 12233567888766888899999999999865 4443111 111121 2
Q ss_pred EEEEecCCCCeEEEEeCCCeEEEEeCCCCCce--eeeccC----------ccceEEEEecCCCCcEEEEEec--------
Q 021121 154 NATWNPRHSDVFCSASGDCTLRIWDVREMGST--MIIPAH----------EFEILACDWNKYDDCLIASASV-------- 213 (317)
Q Consensus 154 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~----------~~~v~~i~~~~~~~~~l~~~~~-------- 213 (317)
.+.+.++ +..++..+.++.+.++|+...... ..+... ......++++| +++.++++..
T Consensus 204 ~~~~~~~-g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~-dg~~lyv~~~~~~~~~~~ 281 (361)
T 2oiz_A 204 FIAPALD-KDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHR-ASGRMYVFMHPDGKEGTH 281 (361)
T ss_dssp CSCCEEC-SSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEET-TTTEEEEEEESSCCTTCT
T ss_pred EEEeccc-CCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEec-CCCeEEEEEccCCCcccc
Confidence 3334566 556666778899999998755422 111100 01122378899 6666555432
Q ss_pred ---CCcEEEEEccCCCccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccc--cceeeeeecccceeEeEEE
Q 021121 214 ---DKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVE--DALVGRYDHHTEFAVGVDM 288 (317)
Q Consensus 214 ---d~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~--~~~~~~~~~~~~~v~~~~~ 288 (317)
.+.|.+||+.+.+ .+..+..+. +.+++|+|+++ +|++++. +.|.+||..++ + ++..+..+......+++
T Consensus 282 ~~~~~~v~viD~~t~~-~v~~i~~~~--p~~ia~spdg~-~l~v~n~-~~v~v~D~~t~~l~-~~~~i~~~G~~P~~~~~ 355 (361)
T 2oiz_A 282 KFPAAEIWVMDTKTKQ-RVARIPGRD--ALSMTIDQQRN-LMLTLDG-GNVNVYDISQPEPK-LLRTIEGAAEASLQVQF 355 (361)
T ss_dssp TCCCSEEEEEETTTTE-EEEEEECTT--CCEEEEETTTT-EEEEECS-SCEEEEECSSSSCE-EEEEETTSCSSEEEEEE
T ss_pred cCCCceEEEEECCCCc-EEEEEecCC--eeEEEECCCCC-EEEEeCC-CeEEEEECCCCcce-eeEEeccCCCCcEEEEe
Confidence 3479999999876 477777666 89999999999 5776666 99999999998 6 55665566677788999
Q ss_pred Eecc
Q 021121 289 SVLV 292 (317)
Q Consensus 289 ~~~~ 292 (317)
+|++
T Consensus 356 ~p~G 359 (361)
T 2oiz_A 356 HPVG 359 (361)
T ss_dssp CCCS
T ss_pred cCCC
Confidence 9983
No 181
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.80 E-value=2e-17 Score=135.05 Aligned_cols=237 Identities=8% Similarity=0.064 Sum_probs=168.3
Q ss_pred CCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCc
Q 021121 61 DGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPT 140 (317)
Q Consensus 61 ~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~ 140 (317)
..|.++.|++++ ..++..+.++.++.|. . .....+..+...+.+++|++++. +++++..++.|.+||.++++
T Consensus 6 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~g~-l~~~~~~~~~i~~~d~~~~~ 77 (333)
T 2dg1_A 6 QDLPTLFYSGKS-NSAVPIISESELQTIT---A---EPWLEISKKGLQLEGLNFDRQGQ-LFLLDVFEGNIFKINPETKE 77 (333)
T ss_dssp CCCCBCCSCGGG-GCSSCCCCGGGSCEEE---C---EEEEEEESSCCCEEEEEECTTSC-EEEEETTTCEEEEECTTTCC
T ss_pred cccceeeecCCc-cceeEEeecccCcccc---c---ceeEEEeccCccccCcEECCCCC-EEEEECCCCEEEEEeCCCCc
Confidence 347788899886 4555556778888883 1 34455566667789999999987 77788889999999998887
Q ss_pred eeEEeeccccceEEEEEecCCCCeEEEEeCC----CeEEEEeCCCCCceeeec--cCccceEEEEecCCCCcEEEEEec-
Q 021121 141 SVRTFKEHAYCVYNATWNPRHSDVFCSASGD----CTLRIWDVREMGSTMIIP--AHEFEILACDWNKYDDCLIASASV- 213 (317)
Q Consensus 141 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~--~~~~~v~~i~~~~~~~~~l~~~~~- 213 (317)
.......+...+.+++++|+ ++++++...+ +.|.+||.++++....+. .....+..++++| +++++++...
T Consensus 78 ~~~~~~~~~~~~~~i~~~~d-g~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~ 155 (333)
T 2dg1_A 78 IKRPFVSHKANPAAIKIHKD-GRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDS-KGGFYFTDFRG 155 (333)
T ss_dssp EEEEEECSSSSEEEEEECTT-SCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECT-TSCEEEEECCC
T ss_pred EEEEeeCCCCCcceEEECCC-CcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECC-CCCEEEEeccc
Confidence 65544345677999999998 7777776666 689999998776543332 2345688999999 8887776653
Q ss_pred -----CCcEEEEEccCCCccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceee--------eeeccc
Q 021121 214 -----DKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVG--------RYDHHT 280 (317)
Q Consensus 214 -----d~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~--------~~~~~~ 280 (317)
.+.|..+|..+.+ ...+......+..++|+|+++.++++.+.++.|.+||+.+...... .+.++
T Consensus 156 ~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~- 232 (333)
T 2dg1_A 156 YSTNPLGGVYYVSPDFRT--VTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH- 232 (333)
T ss_dssp BTTBCCEEEEEECTTSCC--EEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-
T ss_pred cccCCCceEEEEeCCCCE--EEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-
Confidence 3556666665433 2333233345789999999985556666688999999864221111 11122
Q ss_pred ceeEeEEEEeccCCeEEEeecCCcEEEEecC
Q 021121 281 EFAVGVDMSVLVEGLLASTGWDELVYVWQQG 311 (317)
Q Consensus 281 ~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~ 311 (317)
..+..++++++ +.++++...++.|.+|+.+
T Consensus 233 ~~~~~i~~d~~-G~l~v~~~~~~~v~~~d~~ 262 (333)
T 2dg1_A 233 EGPDSCCIDSD-DNLYVAMYGQGRVLVFNKR 262 (333)
T ss_dssp SEEEEEEEBTT-CCEEEEEETTTEEEEECTT
T ss_pred CCCCceEECCC-CCEEEEEcCCCEEEEECCC
Confidence 36788999998 6777777778899999874
No 182
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.80 E-value=1.4e-16 Score=129.78 Aligned_cols=261 Identities=9% Similarity=0.022 Sum_probs=179.6
Q ss_pred CceEEEEecCCCCCcceee---eeecCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEE
Q 021121 36 NGRVHVLDLSPAAPALTEL---VAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSA 112 (317)
Q Consensus 36 ~g~i~i~~~~~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~ 112 (317)
++.|.++|.++........ ...........+.+.. ..+.++...++.|.+||..+. +.+..+. .......+
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~--~~lyv~~~~~~~v~viD~~t~---~~~~~i~-~~~~p~~i 89 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRD--GIGWIVVNNSHVIFAIDINTF---KEVGRIT-GFTSPRYI 89 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEET--TEEEEEEGGGTEEEEEETTTC---CEEEEEE-CCSSEEEE
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEEC--CEEEEEEcCCCEEEEEECccc---EEEEEcC-CCCCCcEE
Confidence 7899999998764211000 0001223456777753 356666667899999999866 5555553 34678899
Q ss_pred EEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeeccc-----cceEEEEEecCCCCeEEEEe-CCCeEEEEeCCCCCcee
Q 021121 113 DYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHA-----YCVYNATWNPRHSDVFCSAS-GDCTLRIWDVREMGSTM 186 (317)
Q Consensus 113 ~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~ 186 (317)
++++++. ++++...++.|.+||+.+++....+.... ..+..+++ +++.++++.. .++.|.++|+++++...
T Consensus 90 ~~~~~g~-lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~ 166 (328)
T 3dsm_A 90 HFLSDEK-AYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVD 166 (328)
T ss_dssp EEEETTE-EEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEE
T ss_pred EEeCCCe-EEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEE
Confidence 9988874 55555578999999999998877766433 14567777 3255555544 48899999999988777
Q ss_pred eeccCccceEEEEecCCCCcEEEEEecC----------CcEEEEEccCCCccEEEEec-CCCceeEEEecCCCCeeEEee
Q 021121 187 IIPAHEFEILACDWNKYDDCLIASASVD----------KSIKIWDVRNYRVPIAVLNG-HGYAVRKVKFSPHRRNLLASC 255 (317)
Q Consensus 187 ~~~~~~~~v~~i~~~~~~~~~l~~~~~d----------~~i~v~d~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~ 255 (317)
.+... .....++++| ++++++++..+ +.|.++|..+.+. ...+.. .......++++|+++. |+.+
T Consensus 167 ~i~~g-~~p~~i~~~~-dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v-~~~~~~~~g~~p~~la~~~d~~~-lyv~ 242 (328)
T 3dsm_A 167 ELTIG-IQPTSLVMDK-YNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTV-EKQFKFKLGDWPSEVQLNGTRDT-LYWI 242 (328)
T ss_dssp EEECS-SCBCCCEECT-TSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEE-EEEEECCTTCCCEEEEECTTSCE-EEEE
T ss_pred EEEcC-CCccceEEcC-CCCEEEEECCCccCCccccCCceEEEEECCCCeE-EEEEecCCCCCceeEEEecCCCE-EEEE
Confidence 76643 3457889999 88887777654 7899999987653 334432 2346789999999985 5554
Q ss_pred ecCCeEEEEecccccceeee-eecccceeEeEEEEeccCCeEEEe----ecCCcEEEEecC
Q 021121 256 SYDMTVCLWDFMVEDALVGR-YDHHTEFAVGVDMSVLVEGLLAST----GWDELVYVWQQG 311 (317)
Q Consensus 256 ~~d~~i~vwd~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~s~----~~dg~i~~w~~~ 311 (317)
.. .|.+||..+++..... .........+++++|+++.++++. ..++.|.+|+..
T Consensus 243 ~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 243 NN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp SS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred cc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 33 8999999877632111 222245688999999756777776 678999999987
No 183
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.80 E-value=1.8e-15 Score=121.39 Aligned_cols=278 Identities=8% Similarity=-0.030 Sum_probs=185.9
Q ss_pred CcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeEE
Q 021121 7 PFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVK 86 (317)
Q Consensus 7 ~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 86 (317)
...+.++.+.+ ++.+.++... ++.|.+|+.. .. ............+..+++.+++ .+.++...++.|.
T Consensus 19 ~~~p~~i~~d~--~g~l~v~~~~------~~~v~~~~~~-~~--~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~v~ 86 (300)
T 2qc5_A 19 DSGPYGITSSE--DGKVWFTQHK------ANKISSLDQS-GR--IKEFEVPTPDAKVMCLIVSSLG-DIWFTENGANKIG 86 (300)
T ss_dssp TCCEEEEEECT--TSCEEEEETT------TTEEEEECTT-SC--EEEEECSSTTCCEEEEEECTTS-CEEEEETTTTEEE
T ss_pred CCCcceeeECC--CCCEEEEcCC------CCeEEEECCC-Cc--eEEEECCCCCCcceeEEECCCC-CEEEEecCCCeEE
Confidence 34778999999 5777777654 7899999977 33 2222211234678999999987 4666655578899
Q ss_pred EEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEE-eeccccceEEEEEecCCCCeE
Q 021121 87 IYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRT-FKEHAYCVYNATWNPRHSDVF 165 (317)
Q Consensus 87 v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l 165 (317)
.+|.. + .. ...........+.++++.+++. ++++...++.|..+|.. ++.... +......+..+++.++ +++.
T Consensus 87 ~~d~~-g-~~-~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~-g~l~ 160 (300)
T 2qc5_A 87 KLSKK-G-GF-TEYPLPQPDSGPYGITEGLNGD-IWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSD-NALW 160 (300)
T ss_dssp EECTT-S-CE-EEEECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTT-SSEE
T ss_pred EECCC-C-Ce-EEecCCCCCCCCccceECCCCC-EEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCC-CCEE
Confidence 99866 3 11 1112222346788999999887 77777768899999987 554422 2223456899999998 6777
Q ss_pred EEEeCCCeEEEEeCCCCCceee-eccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEecCCCceeEEEe
Q 021121 166 CSASGDCTLRIWDVREMGSTMI-IPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKF 244 (317)
Q Consensus 166 ~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~ 244 (317)
++...++.|..+|. +++.... .......+..+++++ +++++++....+.|.+||. +++........+...+.++++
T Consensus 161 v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~ 237 (300)
T 2qc5_A 161 FTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGN-DGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITA 237 (300)
T ss_dssp EEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECT-TSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEE
T ss_pred EEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECC-CCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEE
Confidence 66666889999998 4443332 223345678999998 8888777766778999998 333222223334566889999
Q ss_pred cCCCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEeecCCcEEEEec
Q 021121 245 SPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQ 310 (317)
Q Consensus 245 ~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~ 310 (317)
++++. +.++...++.|..||. +++............+.+++++++ +.++++.. . .|..++.
T Consensus 238 d~~g~-l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~-g~l~v~~~-~-~i~~~~p 298 (300)
T 2qc5_A 238 GKNSE-IWFTEWGANQIGRITN-DNTIQEYQLQTENAEPHGITFGKD-GSVWFALK-C-KIGKLNL 298 (300)
T ss_dssp CSTTC-EEEEETTTTEEEEECT-TSCEEEEECCSTTCCCCCEEECTT-SCEEEECS-S-EEEEEEE
T ss_pred CCCCC-EEEeccCCCeEEEECC-CCcEEEEECCccCCccceeEeCCC-CCEEEEcc-C-ceEEeCC
Confidence 99987 5666556789999998 343221222323456888999987 66555554 4 6666664
No 184
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.80 E-value=1.2e-16 Score=126.48 Aligned_cols=240 Identities=8% Similarity=0.001 Sum_probs=166.2
Q ss_pred ceeEEEEecCCCCeEEE-EEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeEEE
Q 021121 9 NGYSVKFSPFYESRLAV-ATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKI 87 (317)
Q Consensus 9 ~v~~~~~~p~~~~~~~~-~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v 87 (317)
.+.+++++| ++.+.+ +... ++.|.+|+...... . .........+.++++.+++. ++++.. ++.|.+
T Consensus 25 ~p~~i~~~~--~g~l~v~~~~~------~~~i~~~~~~~~~~--~-~~~~~~~~~p~~i~~~~~g~-l~v~~~-~~~i~~ 91 (270)
T 1rwi_B 25 SPSGVAVDS--AGNVYVTSEGM------YGRVVKLATGSTGT--T-VLPFNGLYQPQGLAVDGAGT-VYVTDF-NNRVVT 91 (270)
T ss_dssp CEEEEEECT--TCCEEEEECSS------SCEEEEECC-------E-ECCCCSCCSCCCEEECTTCC-EEEEET-TTEEEE
T ss_pred CccceEECC--CCCEEEEccCC------CCcEEEecCCCccc--c-eEeeCCcCCcceeEECCCCC-EEEEcC-CCEEEE
Confidence 678899999 566666 5343 78999998754431 1 11122335678899999874 555544 889999
Q ss_pred EEeCCCCCCCCceeec-cCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeeccccceEEEEEecCCCCeEE
Q 021121 88 YDTALPPTANPIRSLH-EHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFC 166 (317)
Q Consensus 88 ~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 166 (317)
|+.... ....+. .....+..+++.+++. ++++...++.|.+|+..+.............+.+++++++ +++++
T Consensus 92 ~d~~~~----~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~-g~l~v 165 (270)
T 1rwi_B 92 LAAGSN----NQTVLPFDGLNYPEGLAVDTQGA-VYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNS-GNVYV 165 (270)
T ss_dssp ECTTCS----CCEECCCCSCSSEEEEEECTTCC-EEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTT-CCEEE
T ss_pred EeCCCc----eEeeeecCCcCCCcceEECCCCC-EEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCC-CCEEE
Confidence 997643 222222 2235788999999987 7777777899999986654433222223346789999998 67777
Q ss_pred EEeCCCeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEecCCCceeEEEecC
Q 021121 167 SASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSP 246 (317)
Q Consensus 167 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~ 246 (317)
+...++.|.+||................+..+++++ ++.++++...++.|.+||...... ......+...+.+++++|
T Consensus 166 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~-~g~l~v~~~~~~~v~~~~~~~~~~-~~~~~~~~~~p~~i~~~~ 243 (270)
T 1rwi_B 166 TDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDE-AGTVYVTEHNTNQVVKLLAGSTTS-TVLPFTGLNTPLAVAVDS 243 (270)
T ss_dssp EEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECT-TCCEEEEETTTSCEEEECTTCSCC-EECCCCSCSCEEEEEECT
T ss_pred EECCCCEEEEEecCCCceEeecccCCCCceEEEECC-CCCEEEEECCCCcEEEEcCCCCcc-eeeccCCCCCceeEEECC
Confidence 777788999999876654433333335678999999 888888877788999999876432 222222335688999999
Q ss_pred CCCeeEEeeecCCeEEEEeccccc
Q 021121 247 HRRNLLASCSYDMTVCLWDFMVED 270 (317)
Q Consensus 247 ~~~~~l~~~~~d~~i~vwd~~~~~ 270 (317)
++. ++++...++.|++++....+
T Consensus 244 ~g~-l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 244 DRT-VYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp TCC-EEEEEGGGTEEEEECCCGGG
T ss_pred CCC-EEEEECCCCEEEEEcCCCcc
Confidence 997 78888889999999987655
No 185
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.79 E-value=3.4e-15 Score=129.38 Aligned_cols=295 Identities=13% Similarity=0.058 Sum_probs=192.8
Q ss_pred eecCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEec----CCCCCeEEEE
Q 021121 4 FKTPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWS----ESHDSLLIAA 79 (317)
Q Consensus 4 ~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~~l~~~ 79 (317)
+.....+..+.|+| +++++..++. ++.|.+||+.... .+.+...........++|+ |+|..++++.
T Consensus 193 i~~g~~p~~v~~Sp--DGr~lyv~~~------dg~V~viD~~~~t--~~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n 262 (567)
T 1qks_A 193 LDTGYAVHISRLSA--SGRYLFVIGR------DGKVNMIDLWMKE--PTTVAEIKIGSEARSIETSKMEGWEDKYAIAGA 262 (567)
T ss_dssp EECSSCEEEEEECT--TSCEEEEEET------TSEEEEEETTSSS--CCEEEEEECCSEEEEEEECCSTTCTTTEEEEEE
T ss_pred EeCCCCccceEECC--CCCEEEEEcC------CCeEEEEECCCCC--CcEeEEEecCCCCceeEEccccCCCCCEEEEEE
Confidence 44555678999999 5666666664 8899999995211 1223334445567899999 6986555555
Q ss_pred EcCCeEEEEEeCCCCCCCCceeecc----------CCc-ceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEee-c
Q 021121 80 VADGSVKIYDTALPPTANPIRSLHE----------HTR-EVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFK-E 147 (317)
Q Consensus 80 ~~dg~i~v~~~~~~~~~~~~~~~~~----------~~~-~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~-~ 147 (317)
..++.|.++|..+. +.+..+.. |.. .+..+..++++...++....+|.|.++|..+.+...... .
T Consensus 263 ~~~~~v~ViD~~t~---~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~ 339 (567)
T 1qks_A 263 YWPPQYVIMDGETL---EPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEIS 339 (567)
T ss_dssp EETTEEEEEETTTC---CEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEE
T ss_pred ccCCeEEEEECCCC---cEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeee
Confidence 66799999997655 44443321 222 678888898887677777788999999998764332211 2
Q ss_pred cccceEEEEEecCCCCeE-EEEeCCCeEEEEeCCCCCceeeecc-Cccc--eEEEE-ecCCCCcEEEEEe-cCCcEEEEE
Q 021121 148 HAYCVYNATWNPRHSDVF-CSASGDCTLRIWDVREMGSTMIIPA-HEFE--ILACD-WNKYDDCLIASAS-VDKSIKIWD 221 (317)
Q Consensus 148 ~~~~v~~~~~~~~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~--v~~i~-~~~~~~~~l~~~~-~d~~i~v~d 221 (317)
.......+.|+|+ ++++ ++...++.|.++|+.+++....+.. ...+ -.... ++|..+..++++. .++.|.++|
T Consensus 340 ~~~~~~d~~~~pd-gr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid 418 (567)
T 1qks_A 340 AERFLHDGGLDGS-HRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIG 418 (567)
T ss_dssp CCSSEEEEEECTT-SCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEE
T ss_pred ccccccCceECCC-CCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEec
Confidence 3345778899999 5555 4555688999999999877665543 1111 11222 5772355555554 468999999
Q ss_pred ccCCC------ccEEEEecCCCceeEEEecCCCCeeEEeeec-------CCeEEEEecccc-----cceeeeee------
Q 021121 222 VRNYR------VPIAVLNGHGYAVRKVKFSPHRRNLLASCSY-------DMTVCLWDFMVE-----DALVGRYD------ 277 (317)
Q Consensus 222 ~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-------d~~i~vwd~~~~-----~~~~~~~~------ 277 (317)
....+ ..+..+......-..+..+|++++ +.+... .++|.++|+.+. ......+.
T Consensus 419 ~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~-l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~ 497 (567)
T 1qks_A 419 TDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQY-LYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAG 497 (567)
T ss_dssp CCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSE-EEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHT
T ss_pred CCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCe-EEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccc
Confidence 88621 235666654434345889999996 444332 358999999877 32222221
Q ss_pred --cccceeEeEEEEeccCCeEEEee----cCCcEEEEecCCC
Q 021121 278 --HHTEFAVGVDMSVLVEGLLASTG----WDELVYVWQQGMD 313 (317)
Q Consensus 278 --~~~~~v~~~~~~~~~~~~l~s~~----~dg~i~~w~~~~~ 313 (317)
.....+..+.|+|++..++++.. .++.|.++|..+.
T Consensus 498 ~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~ 539 (567)
T 1qks_A 498 ITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTL 539 (567)
T ss_dssp CCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTT
T ss_pred cCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCc
Confidence 12457899999999555555532 3799999998764
No 186
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.79 E-value=2.3e-16 Score=141.78 Aligned_cols=242 Identities=9% Similarity=0.020 Sum_probs=162.6
Q ss_pred CeeEEEecCCCCCeEEEEEcC-C----eEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCE------
Q 021121 62 GVYDLAWSESHDSLLIAAVAD-G----SVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDT------ 130 (317)
Q Consensus 62 ~v~~~~~~~~~~~~l~~~~~d-g----~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~------ 130 (317)
.+..++|||||. +|+.+..+ | .|++||+.++ +...... ....+..++|+||++ .|+.++.++.
T Consensus 126 ~~~~~~~SPDg~-~la~~~~~~G~~~~~i~v~d~~tg---~~~~~~~-~~~~~~~~~wspDg~-~l~~~~~~~~~~~~~~ 199 (710)
T 2xdw_A 126 ALRGYAFSEDGE-YFAYGLSASGSDWVTIKFMKVDGA---KELPDVL-ERVKFSCMAWTHDGK-GMFYNAYPQQDGKSDG 199 (710)
T ss_dssp EEEEEEECTTSS-EEEEEEEETTCSCEEEEEEETTTT---EEEEEEE-EEECSCCEEECTTSS-EEEEEECCCCSSCCSS
T ss_pred EEEEEEECCCCC-EEEEEEcCCCCceEEEEEEECCCC---CCCcccc-cCcccceEEEEeCCC-EEEEEEECCccccccc
Confidence 588999999995 66655443 3 8999999876 3332211 122367799999998 7777766655
Q ss_pred ----------EEEEEcCCCcee--EEeec--cccceEEEEEecCCCCeEEEEeC-----CCeEEEEeCCC------CC-c
Q 021121 131 ----------VKLWTVDRPTSV--RTFKE--HAYCVYNATWNPRHSDVFCSASG-----DCTLRIWDVRE------MG-S 184 (317)
Q Consensus 131 ----------v~iwd~~~~~~~--~~~~~--~~~~v~~~~~~~~~~~~l~~~~~-----dg~i~i~d~~~------~~-~ 184 (317)
|++|++.+++.. ..+.. +...+..+.|+|+ ++.|+..+. +..|++||+.+ +. .
T Consensus 200 ~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpD-g~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~ 278 (710)
T 2xdw_A 200 TETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDD-GRYVLLSIREGCDPVNRLWYCDLQQESNGITGILK 278 (710)
T ss_dssp SCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTT-SCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCC
T ss_pred cccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCC-CCEEEEEEEccCCCccEEEEEECcccccccCCccc
Confidence 999999887632 22232 3455789999999 666666553 56899999986 43 3
Q ss_pred eeeeccCccceEEEEecCCCCcEEEEEecC----CcEEEEEccCCCc-cEEEEecCCC--ceeEEEecCCCCeeEEeeec
Q 021121 185 TMIIPAHEFEILACDWNKYDDCLIASASVD----KSIKIWDVRNYRV-PIAVLNGHGY--AVRKVKFSPHRRNLLASCSY 257 (317)
Q Consensus 185 ~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d----~~i~v~d~~~~~~-~~~~~~~~~~--~v~~~~~~~~~~~~l~~~~~ 257 (317)
...+..+...+.. .|+| ++..|+..+.. +.|.+||+.+... ....+..|.. .+..++|++++. ++++...
T Consensus 279 ~~~l~~~~~~~~~-~~s~-dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-lv~~~~~ 355 (710)
T 2xdw_A 279 WVKLIDNFEGEYD-YVTN-EGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNF-LVLCYLH 355 (710)
T ss_dssp CEEEECSSSSCEE-EEEE-ETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTE-EEEEEEE
T ss_pred eEEeeCCCCcEEE-EEec-cCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCE-EEEEEEE
Confidence 5555555555544 4777 66666655543 3699999987642 1344444543 688899986655 7888888
Q ss_pred CCe--EEEEecccccceeeeeecccceeEeEEEEeccCCeEEEee---cCCcEEEEecCCCC
Q 021121 258 DMT--VCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTG---WDELVYVWQQGMDP 314 (317)
Q Consensus 258 d~~--i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~---~dg~i~~w~~~~~~ 314 (317)
++. |.+|++.+++ ....+..+.+.+..++++|++..++++.+ ..+.|+.||+.++.
T Consensus 356 ~g~~~l~~~~~~~g~-~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 356 DVKNTLQLHDLATGA-LLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp TTEEEEEEEETTTCC-EEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred CCEEEEEEEECCCCC-EEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 886 4556665554 34556666778889999998434444433 35789999987654
No 187
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.79 E-value=1.8e-15 Score=131.14 Aligned_cols=281 Identities=12% Similarity=0.078 Sum_probs=190.8
Q ss_pred EecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCC
Q 021121 15 FSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPP 94 (317)
Q Consensus 15 ~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~ 94 (317)
|..+..+.++++... ++.|.++|..+.. .+..+.....+..+.|+|++ +++++++.++.|.+||+...
T Consensus 161 ~~~d~~~~~~V~~~~------~~~V~viD~~t~~----v~~~i~~g~~p~~v~~SpDG-r~lyv~~~dg~V~viD~~~~- 228 (567)
T 1qks_A 161 NDWDLENLFSVTLRD------AGQIALIDGSTYE----IKTVLDTGYAVHISRLSASG-RYLFVIGRDGKVNMIDLWMK- 228 (567)
T ss_dssp SCCCGGGEEEEEETT------TTEEEEEETTTCC----EEEEEECSSCEEEEEECTTS-CEEEEEETTSEEEEEETTSS-
T ss_pred cccCCCceEEEEeCC------CCeEEEEECCCCe----EEEEEeCCCCccceEECCCC-CEEEEEcCCCeEEEEECCCC-
Confidence 444335667776664 8999999998765 23334455567899999998 58888889999999998511
Q ss_pred CCCCceeeccCCcceEEEEEe----cCCCCEEEEEcCCCEEEEEEcCCCceeEEeecc-----------ccceEEEEEec
Q 021121 95 TANPIRSLHEHTREVHSADYN----PTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEH-----------AYCVYNATWNP 159 (317)
Q Consensus 95 ~~~~~~~~~~~~~~v~~~~~~----~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~-----------~~~v~~~~~~~ 159 (317)
..+.+..+.. ......++|+ |+|+..+++...++.|.++|..+.+.+..+... ...+..+..++
T Consensus 229 t~~~v~~i~~-G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~ 307 (567)
T 1qks_A 229 EPTTVAEIKI-GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASH 307 (567)
T ss_dssp SCCEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECS
T ss_pred CCcEeEEEec-CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcC
Confidence 1244455543 3345789999 699844555556799999999999888776522 12578888998
Q ss_pred CCCCeEEEEeCCCeEEEEeCCCCCceeeec-cCccceEEEEecCCCCcEEEEEe-cCCcEEEEEccCCCccEEEEec---
Q 021121 160 RHSDVFCSASGDCTLRIWDVREMGSTMIIP-AHEFEILACDWNKYDDCLIASAS-VDKSIKIWDVRNYRVPIAVLNG--- 234 (317)
Q Consensus 160 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~v~~i~~~~~~~~~l~~~~-~d~~i~v~d~~~~~~~~~~~~~--- 234 (317)
++...++....+|.|.++|....+.+.... ........+.|+| ++++++++. .++.|.++|+.+.+. ...+..
T Consensus 308 ~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~p-dgr~~~va~~~sn~V~ViD~~t~kl-~~~i~vgg~ 385 (567)
T 1qks_A 308 YRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDG-SHRYFITAANARNKLVVIDTKEGKL-VAIEDTGGQ 385 (567)
T ss_dssp SSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECT-TSCEEEEEEGGGTEEEEEETTTTEE-EEEEECSSS
T ss_pred CCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECC-CCCEEEEEeCCCCeEEEEECCCCcE-EEEEeccCc
Confidence 866667777778999999987654322211 2334567889999 888766554 678899999998763 444332
Q ss_pred --CCCceeEEE-ecCCCCeeEEeee-cCCeEEEEeccccc------ceeeeeecccceeEeEEEEeccCCeEEEeec---
Q 021121 235 --HGYAVRKVK-FSPHRRNLLASCS-YDMTVCLWDFMVED------ALVGRYDHHTEFAVGVDMSVLVEGLLASTGW--- 301 (317)
Q Consensus 235 --~~~~v~~~~-~~~~~~~~l~~~~-~d~~i~vwd~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~--- 301 (317)
|.+ .... ++|++..+.+++. .++.|.++|..+.+ ..++.+......-..+..+|+ +..|.....
T Consensus 386 ~Phpg--~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~-~~~l~v~~~~~~ 462 (567)
T 1qks_A 386 TPHPG--RGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPN-SQYLYVDATLNP 462 (567)
T ss_dssp SBCCT--TCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTT-CSEEEEECTTCS
T ss_pred CCCCc--cceeeECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCC-CCeEEEecCCCC
Confidence 322 2223 5787554555553 46899999988722 245555544333355778998 566665442
Q ss_pred ----CCcEEEEecCCC
Q 021121 302 ----DELVYVWQQGMD 313 (317)
Q Consensus 302 ----dg~i~~w~~~~~ 313 (317)
.+.|.++|+.+.
T Consensus 463 ~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 463 EAEISGSVAVFDIKAM 478 (567)
T ss_dssp SHHHHTCEEEEEGGGC
T ss_pred CcccCceEEEEECCcc
Confidence 468999998754
No 188
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.79 E-value=3.8e-16 Score=140.30 Aligned_cols=245 Identities=9% Similarity=0.027 Sum_probs=162.9
Q ss_pred ceeEEEEecCCCCeEEEEEecccccccCc----eEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCe
Q 021121 9 NGYSVKFSPFYESRLAVATAQNFGILGNG----RVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGS 84 (317)
Q Consensus 9 ~v~~~~~~p~~~~~~~~~~~~~~~~~~~g----~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 84 (317)
.+..++||| +++.++..... .| .|++||+..+.. ..... .. ..+..++|+||+ ..|+.++.++.
T Consensus 126 ~~~~~~~SP--Dg~~la~~~~~-----~G~~~~~i~v~d~~tg~~--~~~~~-~~-~~~~~~~wspDg-~~l~~~~~~~~ 193 (710)
T 2xdw_A 126 ALRGYAFSE--DGEYFAYGLSA-----SGSDWVTIKFMKVDGAKE--LPDVL-ER-VKFSCMAWTHDG-KGMFYNAYPQQ 193 (710)
T ss_dssp EEEEEEECT--TSSEEEEEEEE-----TTCSCEEEEEEETTTTEE--EEEEE-EE-ECSCCEEECTTS-SEEEEEECCCC
T ss_pred EEEEEEECC--CCCEEEEEEcC-----CCCceEEEEEEECCCCCC--Ccccc-cC-cccceEEEEeCC-CEEEEEEECCc
Confidence 577899999 45544443321 33 899999987652 22111 11 226789999998 47777776655
Q ss_pred ----------------EEEEEeCCCCCC-CCceeeccCCcceEEEEEecCCCCEEEEEcC-----CCEEEEEEcCC----
Q 021121 85 ----------------VKIYDTALPPTA-NPIRSLHEHTREVHSADYNPTRRDSFITSSW-----DDTVKLWTVDR---- 138 (317)
Q Consensus 85 ----------------i~v~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-----dg~v~iwd~~~---- 138 (317)
|.+|++.++... ..+.....|...+..+.|+|+|+ +|+.++. +..|++||+.+
T Consensus 194 ~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~-~l~~~~~~~~~~~~~l~~~d~~~~~~~ 272 (710)
T 2xdw_A 194 DGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGR-YVLLSIREGCDPVNRLWYCDLQQESNG 272 (710)
T ss_dssp SSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSC-EEEEEEECSSSSCCEEEEEEGGGSSSS
T ss_pred cccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCC-EEEEEEEccCCCccEEEEEECcccccc
Confidence 999998765211 11112223456688999999998 6665543 57899999986
Q ss_pred --Cc-eeEEeeccccceEEEEEecCCCCeEEEEeC-C---CeEEEEeCCCCCc--eeeeccCcc--ceEEEEecCCCCcE
Q 021121 139 --PT-SVRTFKEHAYCVYNATWNPRHSDVFCSASG-D---CTLRIWDVREMGS--TMIIPAHEF--EILACDWNKYDDCL 207 (317)
Q Consensus 139 --~~-~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d---g~i~i~d~~~~~~--~~~~~~~~~--~v~~i~~~~~~~~~ 207 (317)
+. ....+..+...+.. .|+|+ +..|+..+. + +.|.+||+.+++. ...+..+.. .+..++|++ ++.+
T Consensus 273 ~~~~~~~~~l~~~~~~~~~-~~s~d-g~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~l 349 (710)
T 2xdw_A 273 ITGILKWVKLIDNFEGEYD-YVTNE-GTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVR-SNFL 349 (710)
T ss_dssp SCSSCCCEEEECSSSSCEE-EEEEE-TTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEET-TTEE
T ss_pred cCCccceEEeeCCCCcEEE-EEecc-CCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEc-CCEE
Confidence 43 35566656555554 47888 555444443 3 3699999987642 344444433 678899987 7888
Q ss_pred EEEEecCCc--EEEEEccCCCccEEEEecCCCceeEEEecCCCCeeEEeee---cCCeEEEEeccccc
Q 021121 208 IASASVDKS--IKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCS---YDMTVCLWDFMVED 270 (317)
Q Consensus 208 l~~~~~d~~--i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~---~d~~i~vwd~~~~~ 270 (317)
+++...++. |.+||+.+++ ....+..+...+..+.++|+++.++++.+ ..+.|..||+.+++
T Consensus 350 v~~~~~~g~~~l~~~~~~~g~-~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 350 VLCYLHDVKNTLQLHDLATGA-LLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEEEETTEEEEEEEETTTCC-EEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEEEEECCEEEEEEEECCCCC-EEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 888888885 5666765554 35666667778899999999876555544 34789999998765
No 189
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.78 E-value=8.2e-18 Score=140.58 Aligned_cols=235 Identities=13% Similarity=0.114 Sum_probs=151.4
Q ss_pred eeEEEecCCCCCeEEEEEc-CC--eEEEEEeCCCCCCCCceeeccCCcc-eEEEEEecCCCCEEEEEcCCCEEEEEEcCC
Q 021121 63 VYDLAWSESHDSLLIAAVA-DG--SVKIYDTALPPTANPIRSLHEHTRE-VHSADYNPTRRDSFITSSWDDTVKLWTVDR 138 (317)
Q Consensus 63 v~~~~~~~~~~~~l~~~~~-dg--~i~v~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~ 138 (317)
+..++|+|+|. .|+.... ++ .|.+|++..+ +.. .+..+... ...+.|+|+++ .|+.++.++.|++||+.+
T Consensus 38 ~~~~~~SpdG~-~l~~~~~~~g~~~l~~~d~~~~---~~~-~l~~~~~~~~~~~~~spdg~-~l~~~~~~~~l~~~d~~~ 111 (396)
T 3c5m_A 38 FYQKCFTQDGK-KLLFAGDFDGNRNYYLLNLETQ---QAV-QLTEGKGDNTFGGFISTDER-AFFYVKNELNLMKVDLET 111 (396)
T ss_dssp TTSCCBCTTSC-EEEEEECTTSSCEEEEEETTTT---EEE-ECCCSSCBCTTTCEECTTSS-EEEEEETTTEEEEEETTT
T ss_pred eecCcCCCCCC-EEEEEEecCCCceEEEEECCCC---cEE-EeecCCCCccccceECCCCC-EEEEEEcCCcEEEEECCC
Confidence 67889999995 5555543 33 6777787654 222 22223333 33378999998 888888888999999998
Q ss_pred CceeEEeeccccceEE-------------------EEEecCCCCeEEEE-----eCCCeEEEEeCCCCCceeeeccCccc
Q 021121 139 PTSVRTFKEHAYCVYN-------------------ATWNPRHSDVFCSA-----SGDCTLRIWDVREMGSTMIIPAHEFE 194 (317)
Q Consensus 139 ~~~~~~~~~~~~~v~~-------------------~~~~~~~~~~l~~~-----~~dg~i~i~d~~~~~~~~~~~~~~~~ 194 (317)
++.......+...... ..|+|+ ++.++.. ..+..|++||+.+++..... .+...
T Consensus 112 ~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spd-g~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~ 189 (396)
T 3c5m_A 112 LEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPL-TSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAW 189 (396)
T ss_dssp CCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCC-CSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSC
T ss_pred CCcEEEEecccccCCCCCEEEeccCCccccccccccccCCC-CcceeeeeeccCCCcceEEEEECCCCcEEeec-cCCcc
Confidence 8765555433332222 345676 4444433 45678999999887655444 45667
Q ss_pred eEEEEecCCCCcEEEEEecC------CcEEEEEccCCCccEEEEecC--CCceeEEEecCCCCeeEEeeecC-----CeE
Q 021121 195 ILACDWNKYDDCLIASASVD------KSIKIWDVRNYRVPIAVLNGH--GYAVRKVKFSPHRRNLLASCSYD-----MTV 261 (317)
Q Consensus 195 v~~i~~~~~~~~~l~~~~~d------~~i~v~d~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~l~~~~~d-----~~i 261 (317)
+..+.|+|.++..|+..+.+ ..|.+||+...+ ...+..+ ...+..++|+|+++. |+.++.+ +.|
T Consensus 190 ~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~--~~~l~~~~~~~~~~~~~~spdg~~-l~~~~~~~~~~~~~l 266 (396)
T 3c5m_A 190 LGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSN--VRKIKEHAEGESCTHEFWIPDGSA-MAYVSYFKGQTDRVI 266 (396)
T ss_dssp EEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCC--CEESSCCCTTEEEEEEEECTTSSC-EEEEEEETTTCCEEE
T ss_pred cccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCc--eeEeeccCCCccccceEECCCCCE-EEEEecCCCCccceE
Confidence 88999998446656655543 368888886543 2333333 235788999999985 5444433 459
Q ss_pred EEEecccccceeeeeecccceeEeEEEEe-ccCCeEEEee----------------cCCcEEEEecCCC
Q 021121 262 CLWDFMVEDALVGRYDHHTEFAVGVDMSV-LVEGLLASTG----------------WDELVYVWQQGMD 313 (317)
Q Consensus 262 ~vwd~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~s~~----------------~dg~i~~w~~~~~ 313 (317)
.+||+.+++.. . +..... .. +.|+| + +++++.++ .++.|++||+...
T Consensus 267 ~~~d~~~g~~~-~-l~~~~~-~~-~~~s~~d-g~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~ 330 (396)
T 3c5m_A 267 YKANPETLENE-E-VMVMPP-CS-HLMSNFD-GSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAK 330 (396)
T ss_dssp EEECTTTCCEE-E-EEECCS-EE-EEEECSS-SSEEEEEECCC----------CCCCCCEEEEEETTTT
T ss_pred EEEECCCCCeE-E-eeeCCC-CC-CCccCCC-CceEEEecCCcceeeccccccccCCCCcEEEEecccC
Confidence 99999877522 1 111112 22 89999 8 66777654 3478999998764
No 190
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.78 E-value=9.3e-17 Score=143.89 Aligned_cols=245 Identities=8% Similarity=-0.055 Sum_probs=156.9
Q ss_pred CCCCeeEEEecCCCCCeEE-EEE----cCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCE---
Q 021121 59 TADGVYDLAWSESHDSLLI-AAV----ADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDT--- 130 (317)
Q Consensus 59 ~~~~v~~~~~~~~~~~~l~-~~~----~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~--- 130 (317)
|...+..++|||||. +|+ +.+ .+..|++||+.+++... ...+.. .....++|+|||+ .|+.++.|..
T Consensus 119 ~~~~~~~~~~SPDG~-~la~~~~~~G~~~~~i~v~dl~tg~~~~-~~~~~~--~~~~~~~wspDg~-~l~~~~~d~~~~~ 193 (695)
T 2bkl_A 119 GTVSLGTWAVSWDGK-KVAFAQKPNAADEAVLHVIDVDSGEWSK-VDVIEG--GKYATPKWTPDSK-GFYYEWLPTDPSI 193 (695)
T ss_dssp SCEEEEEEEECTTSS-EEEEEEEETTCSCCEEEEEETTTCCBCS-SCCBSC--CTTCCCEECTTSS-EEEEEECCCCTTS
T ss_pred CCEEEEEEEECCCCC-EEEEEECCCCCceEEEEEEECCCCCCcC-CcccCc--ccccceEEecCCC-EEEEEEecCCCCC
Confidence 334688999999995 555 333 33579999998763210 111111 1126789999998 7777777665
Q ss_pred ----------EEEEEcCCCce----eEEeeccccceEEEEEecCCCCeEEEEeCCC----eEEEEeCCCCCceeeeccCc
Q 021121 131 ----------VKLWTVDRPTS----VRTFKEHAYCVYNATWNPRHSDVFCSASGDC----TLRIWDVREMGSTMIIPAHE 192 (317)
Q Consensus 131 ----------v~iwd~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg----~i~i~d~~~~~~~~~~~~~~ 192 (317)
|++|++.+++. +.....+...+..+.|+|+ ++.++.++.++ .|+++|..+++ ...+..+.
T Consensus 194 ~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpD-G~~l~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~ 271 (695)
T 2bkl_A 194 KVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRD-GKYLFVYILRGWSENDVYWKRPGEKD-FRLLVKGV 271 (695)
T ss_dssp CGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTT-SCCEEEEEEETTTEEEEEEECTTCSS-CEEEEECS
T ss_pred ccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCC-CCEEEEEEeCCCCceEEEEEcCCCCc-eEEeecCC
Confidence 99999988763 2222334457889999999 56666655554 67777765544 34444445
Q ss_pred cceEEEEecCCCCcEEEEEe---cCCcEEEEEccCCCc--cEEEEecC-CCceeEEEecCCCCeeEEeeecCCeEEEEec
Q 021121 193 FEILACDWNKYDDCLIASAS---VDKSIKIWDVRNYRV--PIAVLNGH-GYAVRKVKFSPHRRNLLASCSYDMTVCLWDF 266 (317)
Q Consensus 193 ~~v~~i~~~~~~~~~l~~~~---~d~~i~v~d~~~~~~--~~~~~~~~-~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~ 266 (317)
..+....+ + ++.+++... .++.|.+||+.++.. ....+..+ ...+..++|+ ++ .++++...|+..+||.+
T Consensus 272 ~~~~~~~~-~-~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~-~lv~~~~~dg~~~l~~~ 347 (695)
T 2bkl_A 272 GAKYEVHA-W-KDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GG-HLSLEYLKDATSEVRVA 347 (695)
T ss_dssp SCCEEEEE-E-TTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TT-EEEEEEEETTEEEEEEE
T ss_pred CceEEEEe-c-CCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CC-EEEEEEEECCEEEEEEE
Confidence 55556666 4 455544443 257899999977542 12233333 4567888888 44 48899999999888876
Q ss_pred ccccceeeeeecc-cceeEeEEEEeccCCeEEEee---cCCcEEEEecCCCC
Q 021121 267 MVEDALVGRYDHH-TEFAVGVDMSVLVEGLLASTG---WDELVYVWQQGMDP 314 (317)
Q Consensus 267 ~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~s~~---~dg~i~~w~~~~~~ 314 (317)
.........+..+ .+.+..++++|++..++++.+ ..+.|++||+.++.
T Consensus 348 ~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~ 399 (695)
T 2bkl_A 348 TLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGK 399 (695)
T ss_dssp ETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCC
T ss_pred eCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 5322233444444 667888999998433443333 45789999987643
No 191
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.78 E-value=5.9e-16 Score=122.59 Aligned_cols=210 Identities=11% Similarity=0.065 Sum_probs=158.6
Q ss_pred CeEEEEEcCCeEEEEEeCCCCCCCCceeeccCC-cceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeeccc-cc
Q 021121 74 SLLIAAVADGSVKIYDTALPPTANPIRSLHEHT-REVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHA-YC 151 (317)
Q Consensus 74 ~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~-~~ 151 (317)
++|++++.++.|.+||.+++ +.+..+..+. ..+.++.+.|+|+ +++ +.++.|..||. +++.+..+..+. ..
T Consensus 6 ~~lv~~~~~~~v~~~d~~tG---~~~w~~~~~~~~~~~~~~~~pdG~-ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~ 78 (276)
T 3no2_A 6 HLLVGGSGWNKIAIINKDTK---EIVWEYPLEKGWECNSVAATKAGE-ILF--SYSKGAKMITR-DGRELWNIAAPAGCE 78 (276)
T ss_dssp EEEEECTTCSEEEEEETTTT---EEEEEEECCTTCCCCEEEECTTSC-EEE--ECBSEEEEECT-TSCEEEEEECCTTCE
T ss_pred cEEEeeCCCCEEEEEECCCC---eEEEEeCCCccCCCcCeEECCCCC-EEE--eCCCCEEEECC-CCCEEEEEcCCCCcc
Confidence 58999999999999998666 6677776655 4788999999997 676 34788999999 799888888653 47
Q ss_pred eEEEEEecCCCCeEEEEeC-CCeEEEEeCCCCCceeeecc------CccceEEEEecCCCCcEEEEEecCCcEEEEEccC
Q 021121 152 VYNATWNPRHSDVFCSASG-DCTLRIWDVREMGSTMIIPA------HEFEILACDWNKYDDCLIASASVDKSIKIWDVRN 224 (317)
Q Consensus 152 v~~~~~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~------~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~ 224 (317)
+.++.+.|+ ++++++.+. ++.+..+|. +++.+..+.. +......++..+ +++++++...++.|..||..
T Consensus 79 ~~~~~~~~d-G~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~-~G~~lv~~~~~~~v~~~d~~- 154 (276)
T 3no2_A 79 MQTARILPD-GNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNK-KGNYLVPLFATSEVREIAPN- 154 (276)
T ss_dssp EEEEEECTT-SCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECT-TSCEEEEETTTTEEEEECTT-
T ss_pred ccccEECCC-CCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECC-CCCEEEEecCCCEEEEECCC-
Confidence 889999998 888888777 788888886 5666655531 122345667788 89999999999999999987
Q ss_pred CCccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeeccc------ceeEeEEEEeccCCeEEE
Q 021121 225 YRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHT------EFAVGVDMSVLVEGLLAS 298 (317)
Q Consensus 225 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~------~~v~~~~~~~~~~~~l~s 298 (317)
++. +..+... ..+.++...+++. +++++..++.|..+|..+++ .+..+..+. ..+..++..++ +.++++
T Consensus 155 G~~-~w~~~~~-~~~~~~~~~~~g~-~~v~~~~~~~v~~~d~~tG~-~~w~~~~~~~~~~~l~~~~~~~~~~~-G~i~v~ 229 (276)
T 3no2_A 155 GQL-LNSVKLS-GTPFSSAFLDNGD-CLVACGDAHCFVQLNLESNR-IVRRVNANDIEGVQLFFVAQLFPLQN-GGLYIC 229 (276)
T ss_dssp SCE-EEEEECS-SCCCEEEECTTSC-EEEECBTTSEEEEECTTTCC-EEEEEEGGGSBSCCCSEEEEEEECTT-SCEEEE
T ss_pred CCE-EEEEECC-CCccceeEcCCCC-EEEEeCCCCeEEEEeCcCCc-EEEEecCCCCCCccccccccceEcCC-CCEEEE
Confidence 664 5665543 3566788889988 68888888899999998877 444443321 23677777776 666666
Q ss_pred e
Q 021121 299 T 299 (317)
Q Consensus 299 ~ 299 (317)
.
T Consensus 230 ~ 230 (276)
T 3no2_A 230 N 230 (276)
T ss_dssp E
T ss_pred e
Confidence 5
No 192
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.77 E-value=9.8e-16 Score=122.98 Aligned_cols=233 Identities=9% Similarity=0.003 Sum_probs=157.2
Q ss_pred cceeEEEEecCCCCe-EEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeEE
Q 021121 8 FNGYSVKFSPFYESR-LAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVK 86 (317)
Q Consensus 8 ~~v~~~~~~p~~~~~-~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 86 (317)
....+++|+| ++. ++++... ++.|..|+.... ..... .+...+.+++++|++ .++++...++.|.
T Consensus 28 ~~~eg~~~d~--~g~~l~~~~~~------~~~i~~~~~~~~---~~~~~--~~~~~~~~l~~~~dg-~l~v~~~~~~~i~ 93 (296)
T 3e5z_A 28 TWTEGPVYVP--ARSAVIFSDVR------QNRTWAWSDDGQ---LSPEM--HPSHHQNGHCLNKQG-HLIACSHGLRRLE 93 (296)
T ss_dssp SSEEEEEEEG--GGTEEEEEEGG------GTEEEEEETTSC---EEEEE--SSCSSEEEEEECTTC-CEEEEETTTTEEE
T ss_pred ccccCCeEeC--CCCEEEEEeCC------CCEEEEEECCCC---eEEEE--CCCCCcceeeECCCC-cEEEEecCCCeEE
Confidence 4567899999 454 5555554 789999998764 22222 355678999999998 4666665668899
Q ss_pred EEEeCCCCCCCCceeec---c-CCcceEEEEEecCCCCEEEE----Ec-------------CCCEEEEEEcCCCceeEEe
Q 021121 87 IYDTALPPTANPIRSLH---E-HTREVHSADYNPTRRDSFIT----SS-------------WDDTVKLWTVDRPTSVRTF 145 (317)
Q Consensus 87 v~~~~~~~~~~~~~~~~---~-~~~~v~~~~~~~~~~~~l~~----~~-------------~dg~v~iwd~~~~~~~~~~ 145 (317)
+||..++ +...... . ....+..++++|+|. ++++ |+ ..+.|..++.. ++ ...+
T Consensus 94 ~~d~~~g---~~~~~~~~~~~~~~~~~~~i~~d~~G~-l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~ 167 (296)
T 3e5z_A 94 RQREPGG---EWESIADSFEGKKLNSPNDVCLAPDGS-LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAP 167 (296)
T ss_dssp EECSTTC---CEEEEECEETTEECCCCCCEEECTTSC-EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEE
T ss_pred EEcCCCC---cEEEEeeccCCCCCCCCCCEEECCCCC-EEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEe
Confidence 9998654 2211111 1 123467899999997 7776 33 13567767665 43 3444
Q ss_pred eccccceEEEEEecCCCCeEEEEeCCCeEEEEeCC-CCCc---eeeeccCccceEEEEecCCCCcEEEEEecCCcEEEEE
Q 021121 146 KEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVR-EMGS---TMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWD 221 (317)
Q Consensus 146 ~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~-~~~~---~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d 221 (317)
..+...+..++|+|+ ++.+++.+.++.|.+||+. +++. ...+..+...+..+++++ +++++++. ++.|.+||
T Consensus 168 ~~~~~~~~gi~~s~d-g~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~-~G~l~v~~--~~~v~~~~ 243 (296)
T 3e5z_A 168 IRDRVKPNGLAFLPS-GNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDA-GGLIWASA--GDGVHVLT 243 (296)
T ss_dssp ECCCSSEEEEEECTT-SCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBT-TSCEEEEE--TTEEEEEC
T ss_pred ecCCCCCccEEECCC-CCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECC-CCCEEEEc--CCeEEEEC
Confidence 455667899999999 6766777888999999987 4443 223333444567899999 88877666 78899999
Q ss_pred ccCCCccEEEEecCCCceeEEEe-cCCCCeeEEeeecCCeEEEEecccc
Q 021121 222 VRNYRVPIAVLNGHGYAVRKVKF-SPHRRNLLASCSYDMTVCLWDFMVE 269 (317)
Q Consensus 222 ~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~l~~~~~d~~i~vwd~~~~ 269 (317)
.. ++ .+..+..+.. +++++| .|+++. |++++.++ +.-++..+.
T Consensus 244 ~~-g~-~~~~~~~~~~-~~~~~f~~~d~~~-L~v~t~~~-l~~~~~~~~ 287 (296)
T 3e5z_A 244 PD-GD-ELGRVLTPQT-TSNLCFGGPEGRT-LYMTVSTE-FWSIETNVR 287 (296)
T ss_dssp TT-SC-EEEEEECSSC-CCEEEEESTTSCE-EEEEETTE-EEEEECSCC
T ss_pred CC-CC-EEEEEECCCC-ceeEEEECCCCCE-EEEEcCCe-EEEEEcccc
Confidence 86 34 3566666666 899999 588884 66666553 444455444
No 193
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.76 E-value=5.8e-15 Score=118.40 Aligned_cols=237 Identities=8% Similarity=-0.012 Sum_probs=165.5
Q ss_pred CCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCce-eeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCC
Q 021121 60 ADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIR-SLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDR 138 (317)
Q Consensus 60 ~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~ 138 (317)
...+.++++.+++ .++++...++.|.+||.. + .... ....+...+.++++.+++. ++++...++.|..||..
T Consensus 14 ~~~~~~i~~d~~g-~l~v~~~~~~~v~~~d~~-~---~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~- 86 (299)
T 2z2n_A 14 DTGPYGITVSDKG-KVWITQHKANMISCINLD-G---KITEYPLPTPDAKVMCLTISSDGE-VWFTENAANKIGRITKK- 86 (299)
T ss_dssp SCCEEEEEECTTS-CEEEEETTTTEEEEECTT-C---CEEEEECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECTT-
T ss_pred CCCccceEECCCC-CEEEEecCCCcEEEEcCC-C---CeEEecCCcccCceeeEEECCCCC-EEEeCCCCCeEEEECCC-
Confidence 3568999999998 466555557889999976 3 2111 1223456789999999987 77777778999999986
Q ss_pred CceeEEee--ccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceee-eccCccceEEEEecCCCCcEEEEEecCC
Q 021121 139 PTSVRTFK--EHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMI-IPAHEFEILACDWNKYDDCLIASASVDK 215 (317)
Q Consensus 139 ~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~v~~i~~~~~~~~~l~~~~~d~ 215 (317)
++. ..+. .....+..+++.++ +.++++...++.|..||. +++.... .......+..+++++ +++++++...++
T Consensus 87 g~~-~~~~~~~~~~~~~~i~~~~~-g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~ 162 (299)
T 2z2n_A 87 GII-KEYTLPNPDSAPYGITEGPN-GDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGS-DNALWFTENQNN 162 (299)
T ss_dssp SCE-EEEECSSTTCCEEEEEECTT-SCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECT-TSCEEEEETTTT
T ss_pred CcE-EEEeCCCcCCCceeeEECCC-CCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcC-CCCEEEEeCCCC
Confidence 332 2332 23457899999997 778877777889999998 4443322 222345688999998 888888777778
Q ss_pred cEEEEEccCCCccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEEeccCCe
Q 021121 216 SIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGL 295 (317)
Q Consensus 216 ~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 295 (317)
.|..||. +++............+..+++++++. ++++...++.|.+||. +++........+...+.+++++++ +.+
T Consensus 163 ~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~-g~l 238 (299)
T 2z2n_A 163 AIGRITE-SGDITEFKIPTPASGPVGITKGNDDA-LWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAG-IDL 238 (299)
T ss_dssp EEEEECT-TCCEEEEECSSTTCCEEEEEECTTSS-EEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECST-TCE
T ss_pred EEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCC-EEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCC-CCE
Confidence 9999998 54422212333445688999999987 6666656789999998 554222122334467889999998 666
Q ss_pred EEEeecCCcEEEEecC
Q 021121 296 LASTGWDELVYVWQQG 311 (317)
Q Consensus 296 l~s~~~dg~i~~w~~~ 311 (317)
+++...++.|..|+..
T Consensus 239 ~v~~~~~~~i~~~d~~ 254 (299)
T 2z2n_A 239 WFTEWGANKIGRLTSN 254 (299)
T ss_dssp EEEETTTTEEEEEETT
T ss_pred EEeccCCceEEEECCC
Confidence 6666567889999873
No 194
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.75 E-value=5e-15 Score=120.57 Aligned_cols=253 Identities=8% Similarity=-0.010 Sum_probs=169.2
Q ss_pred ceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeEEEE
Q 021121 9 NGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIY 88 (317)
Q Consensus 9 ~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~ 88 (317)
.+..+.+.. +++.++... ++.|.+||..+.+ .+..+........+++++++ .+.++...++.|.+|
T Consensus 45 ~~~~i~~~~---~~lyv~~~~------~~~v~viD~~t~~----~~~~i~~~~~p~~i~~~~~g-~lyv~~~~~~~v~~i 110 (328)
T 3dsm_A 45 VAQSMVIRD---GIGWIVVNN------SHVIFAIDINTFK----EVGRITGFTSPRYIHFLSDE-KAYVTQIWDYRIFII 110 (328)
T ss_dssp CEEEEEEET---TEEEEEEGG------GTEEEEEETTTCC----EEEEEECCSSEEEEEEEETT-EEEEEEBSCSEEEEE
T ss_pred cceEEEEEC---CEEEEEEcC------CCEEEEEECcccE----EEEEcCCCCCCcEEEEeCCC-eEEEEECCCCeEEEE
Confidence 356677754 555555554 7899999998765 22223445678999999887 455544478999999
Q ss_pred EeCCCCCCCCceeeccCC-----cceEEEEEecCCCCEEEEEc-CCCEEEEEEcCCCceeEEeeccccceEEEEEecCCC
Q 021121 89 DTALPPTANPIRSLHEHT-----REVHSADYNPTRRDSFITSS-WDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHS 162 (317)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~l~~~~-~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 162 (317)
|..+. +....+.... .....+++ .++. ++++.. .++.|.++|+++++....+... .....++++|+ +
T Consensus 111 D~~t~---~~~~~i~~g~~~~~~~~p~~i~~-~~~~-lyv~~~~~~~~v~viD~~t~~~~~~i~~g-~~p~~i~~~~d-G 183 (328)
T 3dsm_A 111 NPKTY---EITGYIECPDMDMESGSTEQMVQ-YGKY-VYVNCWSYQNRILKIDTETDKVVDELTIG-IQPTSLVMDKY-N 183 (328)
T ss_dssp ETTTT---EEEEEEECTTCCTTTCBCCCEEE-ETTE-EEEEECTTCCEEEEEETTTTEEEEEEECS-SCBCCCEECTT-S
T ss_pred ECCCC---eEEEEEEcCCccccCCCcceEEE-ECCE-EEEEcCCCCCEEEEEECCCCeEEEEEEcC-CCccceEEcCC-C
Confidence 98765 3333333211 14456677 3333 444443 4899999999999888777643 34678999998 6
Q ss_pred CeEEEEeCC----------CeEEEEeCCCCCceeeeccC-ccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEE
Q 021121 163 DVFCSASGD----------CTLRIWDVREMGSTMIIPAH-EFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAV 231 (317)
Q Consensus 163 ~~l~~~~~d----------g~i~i~d~~~~~~~~~~~~~-~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 231 (317)
++++++..+ +.|.++|..+++....+... ......++++| +++.+.++.. .|.+||..+.+.....
T Consensus 184 ~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~-d~~~lyv~~~--~v~~~d~~t~~~~~~~ 260 (328)
T 3dsm_A 184 KMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNG-TRDTLYWINN--DIWRMPVEADRVPVRP 260 (328)
T ss_dssp EEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECT-TSCEEEEESS--SEEEEETTCSSCCSSC
T ss_pred CEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEec-CCCEEEEEcc--EEEEEECCCCceeeee
Confidence 777666554 78999999988776665432 23578999999 7777777654 8999999876532111
Q ss_pred -EecCCCceeEEEecCCCCeeEEee----ecCCeEEEEecccccceeeeeecccceeEeEEE
Q 021121 232 -LNGHGYAVRKVKFSPHRRNLLASC----SYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDM 288 (317)
Q Consensus 232 -~~~~~~~v~~~~~~~~~~~~l~~~----~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~ 288 (317)
+.........++++|++.+++++. ..++.|.+||.. ++ ++..+.. ......++|
T Consensus 261 ~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~-~~~~i~~-G~~P~~~~~ 319 (328)
T 3dsm_A 261 FLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GK-LIDEFYV-GIIPGAFCW 319 (328)
T ss_dssp SBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CC-EEEEEEE-EESEEEEEE
T ss_pred eecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CC-EEEEEEe-ccCcceEEE
Confidence 222245688999999665566666 568899999987 55 4444442 222345554
No 195
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.74 E-value=9.3e-16 Score=137.43 Aligned_cols=249 Identities=8% Similarity=-0.006 Sum_probs=159.6
Q ss_pred cceeEEEEecCCCCeEEE-EEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCe--
Q 021121 8 FNGYSVKFSPFYESRLAV-ATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGS-- 84 (317)
Q Consensus 8 ~~v~~~~~~p~~~~~~~~-~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~-- 84 (317)
..+.+++|||+ ++.++ +.... ...+..|++||+..+... ... ... ......++|+||| ..|+.++.+..
T Consensus 121 ~~~~~~~~SPD--G~~la~~~~~~--G~~~~~i~v~dl~tg~~~-~~~-~~~-~~~~~~~~wspDg-~~l~~~~~d~~~~ 192 (695)
T 2bkl_A 121 VSLGTWAVSWD--GKKVAFAQKPN--AADEAVLHVIDVDSGEWS-KVD-VIE-GGKYATPKWTPDS-KGFYYEWLPTDPS 192 (695)
T ss_dssp EEEEEEEECTT--SSEEEEEEEET--TCSCCEEEEEETTTCCBC-SSC-CBS-CCTTCCCEECTTS-SEEEEEECCCCTT
T ss_pred EEEEEEEECCC--CCEEEEEECCC--CCceEEEEEEECCCCCCc-CCc-ccC-cccccceEEecCC-CEEEEEEecCCCC
Confidence 36889999994 55444 43320 001358999999887632 010 111 1112679999998 57777777665
Q ss_pred -----------EEEEEeCCCCCC-CCceeeccCCcceEEEEEecCCCCEEEEEcCCC----EEEEEEcCCCceeEEeecc
Q 021121 85 -----------VKIYDTALPPTA-NPIRSLHEHTREVHSADYNPTRRDSFITSSWDD----TVKLWTVDRPTSVRTFKEH 148 (317)
Q Consensus 85 -----------i~v~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg----~v~iwd~~~~~~~~~~~~~ 148 (317)
|++|++.++... ..+.....+...+..+.|+|+|+ +|+.++.++ .|.+|+..+++ ...+..+
T Consensus 193 ~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~-~l~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~ 270 (695)
T 2bkl_A 193 IKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGK-YLFVYILRGWSENDVYWKRPGEKD-FRLLVKG 270 (695)
T ss_dssp SCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSC-CEEEEEEETTTEEEEEEECTTCSS-CEEEEEC
T ss_pred CccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCC-EEEEEEeCCCCceEEEEEcCCCCc-eEEeecC
Confidence 999998765211 12223334556788999999998 555555444 67777665554 3445445
Q ss_pred ccceEEEEEecCCCCeEEEEe---CCCeEEEEeCCCCCc---eeeeccC-ccceEEEEecCCCCcEEEEEecCCcEEEEE
Q 021121 149 AYCVYNATWNPRHSDVFCSAS---GDCTLRIWDVREMGS---TMIIPAH-EFEILACDWNKYDDCLIASASVDKSIKIWD 221 (317)
Q Consensus 149 ~~~v~~~~~~~~~~~~l~~~~---~dg~i~i~d~~~~~~---~~~~~~~-~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d 221 (317)
...+....+ +++. +++.+. .++.|.+||+.+++. ...+..+ ...+..++++ ++.++++...|+..++|.
T Consensus 271 ~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~ 346 (695)
T 2bkl_A 271 VGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV--GGHLSLEYLKDATSEVRV 346 (695)
T ss_dssp SSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE--TTEEEEEEEETTEEEEEE
T ss_pred CCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE--CCEEEEEEEECCEEEEEE
Confidence 555666666 5534 555544 358899999987653 2333323 4457788887 677889999999888886
Q ss_pred ccCCCccEEEEecC-CCceeEEEecCCCCeeEEeee---cCCeEEEEeccccc
Q 021121 222 VRNYRVPIAVLNGH-GYAVRKVKFSPHRRNLLASCS---YDMTVCLWDFMVED 270 (317)
Q Consensus 222 ~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~~---~d~~i~vwd~~~~~ 270 (317)
+.........+..+ ...+..+.++|+++.++++.+ ..+.|.+||+.+++
T Consensus 347 ~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~ 399 (695)
T 2bkl_A 347 ATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGK 399 (695)
T ss_dssp EETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCC
T ss_pred EeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 65222234445444 567888999999986555544 34679999998765
No 196
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.74 E-value=2.7e-15 Score=135.41 Aligned_cols=241 Identities=17% Similarity=0.075 Sum_probs=154.7
Q ss_pred CCeeEEEecCCCCCeEEEEEcC-C----eEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCC------
Q 021121 61 DGVYDLAWSESHDSLLIAAVAD-G----SVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDD------ 129 (317)
Q Consensus 61 ~~v~~~~~~~~~~~~l~~~~~d-g----~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg------ 129 (317)
..+..++|||||. +|+.+..+ | .|++||+.++ +.+.. ..+...+..++|+|| + .|+.++.++
T Consensus 163 ~~~~~~~~SPDG~-~la~~~~~~G~e~~~i~v~dl~tg---~~~~~-~~~~~~~~~~~wspD-~-~l~~~~~~~~~~~~~ 235 (741)
T 1yr2_A 163 TALDAWAASDDGR-LLAYSVQDGGSDWRTVKFVGVADG---KPLAD-ELKWVKFSGLAWLGN-D-ALLYSRFAEPKEGQA 235 (741)
T ss_dssp EEEEEEEECTTSS-EEEEEEEETTCSEEEEEEEETTTC---CEEEE-EEEEEESCCCEESTT-S-EEEEEECCCC-----
T ss_pred EEEEeEEECCCCC-EEEEEEcCCCCceEEEEEEECCCC---CCCCc-cCCCceeccEEEECC-C-EEEEEEecCcccccc
Confidence 3688999999995 66655443 3 5999999876 32221 112222357899999 7 666665544
Q ss_pred --------EEEEEEcCCCce--eEEeec--cccceEEEEEecCCCCeEEEEeCC-----CeEEEEeCCCC--Cceeeecc
Q 021121 130 --------TVKLWTVDRPTS--VRTFKE--HAYCVYNATWNPRHSDVFCSASGD-----CTLRIWDVREM--GSTMIIPA 190 (317)
Q Consensus 130 --------~v~iwd~~~~~~--~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~--~~~~~~~~ 190 (317)
.|++|++.+++. ...+.. +...+..+.|+|+ ++.++..+.+ ..|++||+.++ +....+..
T Consensus 236 ~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpD-G~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~ 314 (741)
T 1yr2_A 236 FQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSD-GRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIP 314 (741)
T ss_dssp ---CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTT-SCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEEC
T ss_pred cccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCC-CCEEEEEEEccCCCcceEEEEECCCCCCcccEEecC
Confidence 389999987753 222332 2235889999999 6766665543 38999999876 41444544
Q ss_pred CccceEEEEecCCCCcEEEEEecC----CcEEEEEccCCC-ccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEe
Q 021121 191 HEFEILACDWNKYDDCLIASASVD----KSIKIWDVRNYR-VPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265 (317)
Q Consensus 191 ~~~~v~~i~~~~~~~~~l~~~~~d----~~i~v~d~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd 265 (317)
+........ +| +++.|+..+.+ +.|.+||+.+.. .....+..+...+..+.++ +..++++...|+..+||.
T Consensus 315 ~~~~~~~~~-~~-dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~ 390 (741)
T 1yr2_A 315 DLKAQWDFV-DG-VGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA--GNRLFASYIHDAKSQVLA 390 (741)
T ss_dssp SSSSCEEEE-EE-ETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE--BTEEEEEEEETTEEEEEE
T ss_pred CCCceEEEE-ec-cCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE--CCEEEEEEEECCEEEEEE
Confidence 444444443 46 67777766653 459999987742 2233444455567777887 334888999999888886
Q ss_pred cccccceeeeeec-ccceeEeEEEEeccCCeEEEee---cCCcEEEEecCCC
Q 021121 266 FMVEDALVGRYDH-HTEFAVGVDMSVLVEGLLASTG---WDELVYVWQQGMD 313 (317)
Q Consensus 266 ~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~s~~---~dg~i~~w~~~~~ 313 (317)
+.........+.. +.+.+..++++|++..++++.+ ..+.|++||+.++
T Consensus 391 ~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg 442 (741)
T 1yr2_A 391 FDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATA 442 (741)
T ss_dssp EETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTT
T ss_pred EeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence 6522223344443 3567889999998444444433 4588999998764
No 197
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.74 E-value=7.2e-15 Score=120.57 Aligned_cols=227 Identities=11% Similarity=0.109 Sum_probs=142.0
Q ss_pred ceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEc-------
Q 021121 9 NGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVA------- 81 (317)
Q Consensus 9 ~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~------- 81 (317)
.+..++|||+ ++.++.....-. .+...|.+|++..+. ...+. .... +..++|+|++. .|+.++.
T Consensus 60 ~~~~~~~SpD--g~~la~~~~~~~-~~~~~l~~~~~~~g~--~~~l~--~~~~-~~~~~wspdg~-~l~~~~~~~~~~~~ 130 (347)
T 2gop_A 60 NATMPRISPD--GKKIAFMRANEE-KKVSEIWVADLETLS--SKKIL--EAKN-IRSLEWNEDSR-KLLIVGFKRREDED 130 (347)
T ss_dssp SCEEEEECTT--SSEEEEEEEETT-TTEEEEEEEETTTTE--EEEEE--EESE-EEEEEECTTSS-EEEEEEECCCC---
T ss_pred cCCCeEECCC--CCEEEEEEeccC-CCcceEEEEECCCCc--eEEEE--cCCC-ccceeECCCCC-EEEEEEccCCCcCC
Confidence 4677999994 544443332100 002247777776543 22222 2233 99999999985 6666553
Q ss_pred --------------------CCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCC------C-EEEEE
Q 021121 82 --------------------DGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWD------D-TVKLW 134 (317)
Q Consensus 82 --------------------dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d------g-~v~iw 134 (317)
...|.+|++..+ +.+..+.. . .+..+.|+|++ +++++..+ . ...+|
T Consensus 131 ~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~---~~~~~l~~-~-~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~ 203 (347)
T 2gop_A 131 FIFEDDVPAWFDDLGFFDGEKTTFWIFDTESE---EVIEEFEK-P-RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIY 203 (347)
T ss_dssp ------CCCC---------CEEEEEEEETTTT---EEEEEEEE-E-TTCEEEEETTE--EEEEEECCCSSCCSSCCEEEE
T ss_pred cEEEcccceeecCcccccCccceEEEEECCCC---eEEeeecC-C-CcccccCCCCe--EEEEEecccccccccccccEE
Confidence 256888888754 33233333 3 78889999998 66666543 2 33444
Q ss_pred EcCCCceeEEeeccccceEEEEEecCCCCeEEEEeCC--------CeEEEEeCCCCCceeeeccCccceEE-EEecCCCC
Q 021121 135 TVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGD--------CTLRIWDVREMGSTMIIPAHEFEILA-CDWNKYDD 205 (317)
Q Consensus 135 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d--------g~i~i~d~~~~~~~~~~~~~~~~v~~-i~~~~~~~ 205 (317)
.+.+++ ...+..+ ..+..+ +|+ ++.++.++.+ ..|.+|| +++.......+...+.. +.|+ ++
T Consensus 204 ~~d~~~-~~~l~~~-~~~~~~--spd-g~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s--dg 274 (347)
T 2gop_A 204 IWEDGK-EEKMFEK-VSFYAV--DSD-GERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD--GK 274 (347)
T ss_dssp EEETTE-EEEEEEE-ESEEEE--EEC-SSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET--TE
T ss_pred EeCCCc-eEEeccC-cceeeE--CCC-CCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc--Cc
Confidence 444444 3444434 555554 898 6666555533 4688888 55544444555667776 8897 56
Q ss_pred cEEEEEecCCcEEEEEccCCCccEEEEecCCCceeEEEecCCCCeeEEeeecCCeE-EEEecc
Q 021121 206 CLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTV-CLWDFM 267 (317)
Q Consensus 206 ~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i-~vwd~~ 267 (317)
++++++.++.+++| +.+++ ...+..+...|.+++|+| . ++++++.++.. .+|.+.
T Consensus 275 -~~~~~~~~~~~~l~-~~~g~--~~~~~~~~~~v~~~~~s~--~-~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 275 -VYFTLFEEGSVNLY-IWDGE--IKPIAKGRHWIMGFDVDE--I-VVYLKETATRLRELFTWD 330 (347)
T ss_dssp -EEEEEEETTEEEEE-EESSS--EEEEECSSSEEEEEEESS--S-EEEEEECSSSCCEEEEES
T ss_pred -EEEEEecCCcEEEE-EcCCc--eEEEecCCCeEEeeeeeC--c-EEEEEcCCCChHHheEeC
Confidence 88899999999999 87433 344445677899999999 4 67777766654 777765
No 198
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.73 E-value=1.3e-14 Score=117.23 Aligned_cols=240 Identities=8% Similarity=0.039 Sum_probs=161.6
Q ss_pred CCCCeeEEEecCCCCCeEEE-------EEcCCeEEEEEeCCCCCCCCceeec-----cCCcceEEEEEecC-CCCEEEEE
Q 021121 59 TADGVYDLAWSESHDSLLIA-------AVADGSVKIYDTALPPTANPIRSLH-----EHTREVHSADYNPT-RRDSFITS 125 (317)
Q Consensus 59 ~~~~v~~~~~~~~~~~~l~~-------~~~dg~i~v~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~-~~~~l~~~ 125 (317)
.-....+++|.+++ .++++ +..++.|.+|+...+ +. ..+. ++...+.+++++++ +. ++++.
T Consensus 16 ~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~~i~~~d~~~g---~~-~~~~~~~~~~~~~~~~~i~~~~~~g~-l~v~~ 89 (314)
T 1pjx_A 16 DIPGAEGPVFDKNG-DFYIVAPEVEVNGKPAGEILRIDLKTG---KK-TVICKPEVNGYGGIPAGCQCDRDANQ-LFVAD 89 (314)
T ss_dssp CCTTCEEEEECTTS-CEEEEETTCEETTEECCEEEEECTTTC---CE-EEEECCEETTEECCEEEEEECSSSSE-EEEEE
T ss_pred cCCCccCceECCCC-CEEEEEeccccCCCCCCEEEEEeCCCC---cE-EEEEecccCCCCCCCceEEEecCCCc-EEEEE
Confidence 34457889999887 56666 567889999997654 22 2222 24567899999998 65 44444
Q ss_pred cCCCEEEEEEcCCCceeEE-eec----cccceEEEEEecCCCCeEEEEeCC---------------CeEEEEeCCCCCce
Q 021121 126 SWDDTVKLWTVDRPTSVRT-FKE----HAYCVYNATWNPRHSDVFCSASGD---------------CTLRIWDVREMGST 185 (317)
Q Consensus 126 ~~dg~v~iwd~~~~~~~~~-~~~----~~~~v~~~~~~~~~~~~l~~~~~d---------------g~i~i~d~~~~~~~ 185 (317)
. .+.|.+||.+ ++.... ... ....+.++++.++ ++++++...+ +.|..+|.. ++..
T Consensus 90 ~-~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~-g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~ 165 (314)
T 1pjx_A 90 M-RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYE-GNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMI 165 (314)
T ss_dssp T-TTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTT-SCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEE
T ss_pred C-CCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCC-CCEEEEecCcccccccccccccCCCCeEEEECCC-CCEE
Confidence 4 4589999988 654322 211 1235889999998 7777766554 578888765 4433
Q ss_pred eeeccCccceEEEEec----CCCCcEE-EEEecCCcEEEEEcc-CCCc----cEEEEecCC-CceeEEEecCCCCeeEEe
Q 021121 186 MIIPAHEFEILACDWN----KYDDCLI-ASASVDKSIKIWDVR-NYRV----PIAVLNGHG-YAVRKVKFSPHRRNLLAS 254 (317)
Q Consensus 186 ~~~~~~~~~v~~i~~~----~~~~~~l-~~~~~d~~i~v~d~~-~~~~----~~~~~~~~~-~~v~~~~~~~~~~~~l~~ 254 (317)
. +..+......++++ | +++.+ ++...++.|.+||.. .++. ....+..+. ..+..++++++|. ++++
T Consensus 166 ~-~~~~~~~~~~i~~~~~~d~-dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~ 242 (314)
T 1pjx_A 166 Q-VDTAFQFPNGIAVRHMNDG-RPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNN-LLVA 242 (314)
T ss_dssp E-EEEEESSEEEEEEEECTTS-CEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCC-EEEE
T ss_pred E-eccCCCCcceEEEecccCC-CCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCC-EEEE
Confidence 2 22233446788999 8 77554 444567899999986 3221 122233333 5678999999997 6776
Q ss_pred eecCCeEEEEecccccceeeeeecccceeEeEEEEeccCC-eEEEeecCCcEEEEecCCC
Q 021121 255 CSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEG-LLASTGWDELVYVWQQGMD 313 (317)
Q Consensus 255 ~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~s~~~dg~i~~w~~~~~ 313 (317)
...++.|.+||..+++ ....+..+...+.+++|+|+ ++ ++++...++.|..|++...
T Consensus 243 ~~~~~~i~~~d~~~g~-~~~~~~~~~~~~~~i~~~~d-g~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 243 NWGSSHIEVFGPDGGQ-PKMRIRCPFEKPSNLHFKPQ-TKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp EETTTEEEEECTTCBS-CSEEEECSSSCEEEEEECTT-SSEEEEEETTTTEEEEEECSSC
T ss_pred EcCCCEEEEEcCCCCc-EeEEEeCCCCCceeEEECCC-CCEEEEEeCCCCeEEEEeCCCC
Confidence 6678899999987655 33455555577899999998 56 5556666788999998754
No 199
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.72 E-value=2.1e-14 Score=116.11 Aligned_cols=242 Identities=10% Similarity=0.110 Sum_probs=159.5
Q ss_pred ceeEEEEecCCCCeEEEE-------EecccccccCceEEEEecCCCCCcceeeee---ecCCCCeeEEEecCC-CCCeEE
Q 021121 9 NGYSVKFSPFYESRLAVA-------TAQNFGILGNGRVHVLDLSPAAPALTELVA---FDTADGVYDLAWSES-HDSLLI 77 (317)
Q Consensus 9 ~v~~~~~~p~~~~~~~~~-------~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~-~~~~l~ 77 (317)
.+.+++|+| ++.+.++ ... ++.|.+|+..... ...+.. ..+...+..++++++ + . +.
T Consensus 19 ~~~~~~~~~--~g~l~~~~~~~~~~~~~------~~~i~~~d~~~g~--~~~~~~~~~~~~~~~~~~i~~~~~~g-~-l~ 86 (314)
T 1pjx_A 19 GAEGPVFDK--NGDFYIVAPEVEVNGKP------AGEILRIDLKTGK--KTVICKPEVNGYGGIPAGCQCDRDAN-Q-LF 86 (314)
T ss_dssp TCEEEEECT--TSCEEEEETTCEETTEE------CCEEEEECTTTCC--EEEEECCEETTEECCEEEEEECSSSS-E-EE
T ss_pred CccCceECC--CCCEEEEEeccccCCCC------CCEEEEEeCCCCc--EEEEEecccCCCCCCCceEEEecCCC-c-EE
Confidence 457899998 5677766 232 7799999976654 222211 013356899999998 5 3 44
Q ss_pred EEEcCCeEEEEEeCCCCCCCCc-ee-ec-cCCcceEEEEEecCCCCEEEEEcCC---------------CEEEEEEcCCC
Q 021121 78 AAVADGSVKIYDTALPPTANPI-RS-LH-EHTREVHSADYNPTRRDSFITSSWD---------------DTVKLWTVDRP 139 (317)
Q Consensus 78 ~~~~dg~i~v~~~~~~~~~~~~-~~-~~-~~~~~v~~~~~~~~~~~~l~~~~~d---------------g~v~iwd~~~~ 139 (317)
.+...+.|.+||.+ ++ .... .. .. .....+.++++.+++. ++++...+ +.|..+|.. +
T Consensus 87 v~~~~~~l~~~d~~-g~-~~~~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g 162 (314)
T 1pjx_A 87 VADMRLGLLVVQTD-GT-FEEIAKKDSEGRRMQGCNDCAFDYEGN-LWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-G 162 (314)
T ss_dssp EEETTTEEEEEETT-SC-EEECCSBCTTSCBCBCCCEEEECTTSC-EEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-S
T ss_pred EEECCCCEEEEeCC-CC-EEEEEeccCCCccccCCcCEEECCCCC-EEEEecCcccccccccccccCCCCeEEEECCC-C
Confidence 44445578899976 41 1111 11 01 1224588999999987 66666554 578888776 5
Q ss_pred ceeEEeeccccceEEEEEe----cCCCCeEEEEeCCCeEEEEeCC-CCC-----ceeeeccCc-cceEEEEecCCCCcEE
Q 021121 140 TSVRTFKEHAYCVYNATWN----PRHSDVFCSASGDCTLRIWDVR-EMG-----STMIIPAHE-FEILACDWNKYDDCLI 208 (317)
Q Consensus 140 ~~~~~~~~~~~~v~~~~~~----~~~~~~l~~~~~dg~i~i~d~~-~~~-----~~~~~~~~~-~~v~~i~~~~~~~~~l 208 (317)
+... +..+......++++ |++..++++...++.|.+||++ +++ ....+..+. ..+..+++++ +++++
T Consensus 163 ~~~~-~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~-~G~l~ 240 (314)
T 1pjx_A 163 QMIQ-VDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDE-DNNLL 240 (314)
T ss_dssp CEEE-EEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBT-TCCEE
T ss_pred CEEE-eccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECC-CCCEE
Confidence 4433 32334457889999 9832445555678899999986 332 122223332 5578899999 88888
Q ss_pred EEEecCCcEEEEEccCCCccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccc
Q 021121 209 ASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVE 269 (317)
Q Consensus 209 ~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~ 269 (317)
++...++.|.+||..+++. ...+..+...+.+++|+|+++.++++...++.|..|++...
T Consensus 241 v~~~~~~~i~~~d~~~g~~-~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 241 VANWGSSHIEVFGPDGGQP-KMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp EEEETTTEEEEECTTCBSC-SEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred EEEcCCCEEEEEcCCCCcE-eEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 8887888999999875443 44555565788999999999855555556788999998754
No 200
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.72 E-value=1.7e-13 Score=113.07 Aligned_cols=257 Identities=12% Similarity=0.028 Sum_probs=165.5
Q ss_pred eEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEE----------cCCeEEEEEeCCCCCCCCceeeccC--
Q 021121 38 RVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAV----------ADGSVKIYDTALPPTANPIRSLHEH-- 105 (317)
Q Consensus 38 ~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~----------~dg~i~v~~~~~~~~~~~~~~~~~~-- 105 (317)
.|.+||..+.. .+........- .++++||+. .++++. .++.|.+||..+. +.+..+...
T Consensus 48 ~v~v~D~~t~~----~~~~i~~g~~p-~i~~spDg~-~lyv~n~~~~~~~rg~~~~~v~viD~~t~---~~~~~i~~~~~ 118 (373)
T 2mad_H 48 QQWVLDAGSGS----ILGHVNGGFLP-NPVAAHSGS-EFALASTSFSRIAKGKRTDYVEVFDPVTF---LPIADIELPDA 118 (373)
T ss_pred EEEEEECCCCe----EEEEecCCCCC-CeEECCCCC-EEEEEeccccccccCCCCCeEEEEECCCC---cEEEEEECCCc
Confidence 88999987654 22333333333 999999995 666654 3678999998754 333332211
Q ss_pred -----CcceEEEEEecCCCCEEEEEcC--CCEEEEEEcCCCceeEE-eeccccceEEEEEecCCCCeEEEEeCCCeEEEE
Q 021121 106 -----TREVHSADYNPTRRDSFITSSW--DDTVKLWTVDRPTSVRT-FKEHAYCVYNATWNPRHSDVFCSASGDCTLRIW 177 (317)
Q Consensus 106 -----~~~v~~~~~~~~~~~~l~~~~~--dg~v~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~ 177 (317)
......+.|+|+|+ +|+++.. ++.|.++| .+++.+.. +... . ++.+.|++...+++.+.||.+.++
T Consensus 119 ~~~~~g~~p~~~~~spDG~-~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~-~---~~~~~~~~~~~~~~~~~dg~~~~v 192 (373)
T 2mad_H 119 PRFDVGPYSWMNANTPNNA-DLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP-T---CYHIHPGAPSTFYLLCAQGGLAKT 192 (373)
T ss_pred cccccCCCccceEECCCCC-EEEEEecCCCCeEEEEE-CCCCEEeEEcCCC-c---eEEEEeCCCceEEEEcCCCCEEEE
Confidence 12345789999999 6666653 58899999 99988777 5432 2 245667766777888899999999
Q ss_pred eCCCCCceeeec-----cCccce-EEEEecCCCCcEEEEEecCCcEEEEEccCCCcc-EEEEec----------CCCcee
Q 021121 178 DVREMGSTMIIP-----AHEFEI-LACDWNKYDDCLIASASVDKSIKIWDVRNYRVP-IAVLNG----------HGYAVR 240 (317)
Q Consensus 178 d~~~~~~~~~~~-----~~~~~v-~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~-~~~~~~----------~~~~v~ 240 (317)
|. +++...... ....++ ....+.+..+.++++ +..+.+.+.|+...... ...+.. ......
T Consensus 193 d~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~ 270 (373)
T 2mad_H 193 DH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWP-VYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQ 270 (373)
T ss_pred EC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEE-cCCceEEEEeccCCcceEeeeeeecCCcccccceecCceE
Confidence 99 776653321 111221 234556633444444 46789999998754321 111110 112244
Q ss_pred EEEecCCCCeeEEeee---------cCCeEEEEecccccceeeeeecccceeEeEEEEeccCC-eEEEee-cCCcEEEEe
Q 021121 241 KVKFSPHRRNLLASCS---------YDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEG-LLASTG-WDELVYVWQ 309 (317)
Q Consensus 241 ~~~~~~~~~~~l~~~~---------~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~s~~-~dg~i~~w~ 309 (317)
.+.++|+++.++++.. ..+.|.++|+.+.+ .+..+.. .....+++|+|+ ++ +++++. .++.|.++|
T Consensus 271 ~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~-vv~~i~~-g~~p~~i~~s~D-g~~~l~v~~~~~~~V~ViD 347 (373)
T 2mad_H 271 QVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQ-TSSQISL-GHDVDAISVAQD-GGPDLYALSAGTEVLHIYD 347 (373)
T ss_pred eEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCE-EEEEEEC-CCCcCeEEECCC-CCeEEEEEcCCCCeEEEEE
Confidence 5789999886444432 23579999999886 4455542 335789999999 55 777777 589999999
Q ss_pred cCCCC
Q 021121 310 QGMDP 314 (317)
Q Consensus 310 ~~~~~ 314 (317)
+.+.+
T Consensus 348 ~~t~~ 352 (373)
T 2mad_H 348 AGAGD 352 (373)
T ss_pred CCCCC
Confidence 98754
No 201
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.72 E-value=1.7e-14 Score=114.15 Aligned_cols=234 Identities=8% Similarity=0.029 Sum_probs=165.1
Q ss_pred CCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCC--CCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCC
Q 021121 20 ESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTA--DGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTAN 97 (317)
Q Consensus 20 ~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~ 97 (317)
++.++++++. ++.|++||.++++. +-.+... ..+.++.+.|+| ++++ +.++.|..||. ++ +
T Consensus 4 ~~~~lv~~~~------~~~v~~~d~~tG~~----~w~~~~~~~~~~~~~~~~pdG-~ilv--s~~~~V~~~d~-~G---~ 66 (276)
T 3no2_A 4 PQHLLVGGSG------WNKIAIINKDTKEI----VWEYPLEKGWECNSVAATKAG-EILF--SYSKGAKMITR-DG---R 66 (276)
T ss_dssp CCEEEEECTT------CSEEEEEETTTTEE----EEEEECCTTCCCCEEEECTTS-CEEE--ECBSEEEEECT-TS---C
T ss_pred CCcEEEeeCC------CCEEEEEECCCCeE----EEEeCCCccCCCcCeEECCCC-CEEE--eCCCCEEEECC-CC---C
Confidence 4677777765 89999999876652 2222222 468899999998 4776 45778999997 44 5
Q ss_pred CceeeccC-CcceEEEEEecCCCCEEEEEcC-CCEEEEEEcCCCceeEEeec------cccceEEEEEecCCCCeEEEEe
Q 021121 98 PIRSLHEH-TREVHSADYNPTRRDSFITSSW-DDTVKLWTVDRPTSVRTFKE------HAYCVYNATWNPRHSDVFCSAS 169 (317)
Q Consensus 98 ~~~~~~~~-~~~v~~~~~~~~~~~~l~~~~~-dg~v~iwd~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~l~~~~ 169 (317)
.+..+..+ ...+.++.+.++|+ ++++.+. ++.|..+|. +++.+..+.. +......++..++ ++++++..
T Consensus 67 ~~W~~~~~~~~~~~~~~~~~dG~-~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~-G~~lv~~~ 143 (276)
T 3no2_A 67 ELWNIAAPAGCEMQTARILPDGN-ALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKK-GNYLVPLF 143 (276)
T ss_dssp EEEEEECCTTCEEEEEEECTTSC-EEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTT-SCEEEEET
T ss_pred EEEEEcCCCCccccccEECCCCC-EEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCC-CCEEEEec
Confidence 66666654 35788899999998 7777776 788888886 6777666642 2224556677887 88999999
Q ss_pred CCCeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEecCC------CceeEEE
Q 021121 170 GDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHG------YAVRKVK 243 (317)
Q Consensus 170 ~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~------~~v~~~~ 243 (317)
.++.|..||.+ ++.+..+... ..+.++...+ ++++++++..++.|..+|..+++. +..+..+. ..+..++
T Consensus 144 ~~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~-~g~~~v~~~~~~~v~~~d~~tG~~-~w~~~~~~~~~~~l~~~~~~~ 219 (276)
T 3no2_A 144 ATSEVREIAPN-GQLLNSVKLS-GTPFSSAFLD-NGDCLVACGDAHCFVQLNLESNRI-VRRVNANDIEGVQLFFVAQLF 219 (276)
T ss_dssp TTTEEEEECTT-SCEEEEEECS-SCCCEEEECT-TSCEEEECBTTSEEEEECTTTCCE-EEEEEGGGSBSCCCSEEEEEE
T ss_pred CCCEEEEECCC-CCEEEEEECC-CCccceeEcC-CCCEEEEeCCCCeEEEEeCcCCcE-EEEecCCCCCCccccccccce
Confidence 99999999988 8888888754 3456677788 899999988888999999987774 55554322 2377888
Q ss_pred ecCCCCeeEEeeecC--------CeEEEEecccccceeeeeec
Q 021121 244 FSPHRRNLLASCSYD--------MTVCLWDFMVEDALVGRYDH 278 (317)
Q Consensus 244 ~~~~~~~~l~~~~~d--------~~i~vwd~~~~~~~~~~~~~ 278 (317)
..+++. ++++.... +..+++++.....++-.+..
T Consensus 220 ~~~~G~-i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~~W~~~~ 261 (276)
T 3no2_A 220 PLQNGG-LYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQLND 261 (276)
T ss_dssp ECTTSC-EEEEEECTTCTTGGGSCCCSEEEECTTSBEEEEECC
T ss_pred EcCCCC-EEEEeccCccccccccCCceEEEECCCCCEEEEecC
Confidence 999987 55554311 23456666433345544444
No 202
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.70 E-value=4.3e-14 Score=118.28 Aligned_cols=235 Identities=8% Similarity=0.035 Sum_probs=163.1
Q ss_pred CeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCC--EEEEEEcCCC
Q 021121 62 GVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDD--TVKLWTVDRP 139 (317)
Q Consensus 62 ~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg--~v~iwd~~~~ 139 (317)
....|+|++++ .++++...++.|++||...+ ........ ..... ++|++++. .|+++..++ .|.+++..++
T Consensus 132 ~P~~la~d~~g-~lyv~d~~~~~I~~id~~~g---~~~~~~~~-~~~~~-ia~~~~g~-~l~~~d~~~~~~I~~~d~~~~ 204 (409)
T 3hrp_A 132 YMWGIAAVGNN-TVLAYQRDDPRVRLISVDDN---KVTTVHPG-FKGGK-PAVTKDKQ-RVYSIGWEGTHTVYVYMKASG 204 (409)
T ss_dssp CEEEEEECSTT-EEEEEETTTTEEEEEETTTT---EEEEEEET-CCBCB-CEECTTSS-EEEEEBSSTTCEEEEEEGGGT
T ss_pred CceEEEEeCCC-CEEEEecCCCcEEEEECCCC---EEEEeecc-CCCCc-eeEecCCC-cEEEEecCCCceEEEEEcCCC
Confidence 57789999987 47777767789999998754 22222222 22233 89999998 777777655 8999998876
Q ss_pred ceeEEe----eccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceee----eccCccce-E-EEEecCCCCcEEE
Q 021121 140 TSVRTF----KEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMI----IPAHEFEI-L-ACDWNKYDDCLIA 209 (317)
Q Consensus 140 ~~~~~~----~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~----~~~~~~~v-~-~i~~~~~~~~~l~ 209 (317)
.....+ ......+.+++++|+++.++ .+..++.|+.||..++..... ..+....- . .++++|.++.+++
T Consensus 205 ~~~~~~g~~~~~~~~~p~~iav~p~~g~ly-v~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv 283 (409)
T 3hrp_A 205 WAPTRIGQLGSTFSGKIGAVALDETEEWLY-FVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYM 283 (409)
T ss_dssp TCEEEEEECCTTSCSCCCBCEECTTSSEEE-EECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEE
T ss_pred ceeEEeeeccchhcCCcEEEEEeCCCCeEE-EEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEE
Confidence 554444 21445678999999635555 477788999999987653322 11121111 2 8999995577777
Q ss_pred EEecCCcEEEEEccCCCccEEEEecCC---------------CceeEEEecCCCCeeEEeee-cCCeEEEEeccccccee
Q 021121 210 SASVDKSIKIWDVRNYRVPIAVLNGHG---------------YAVRKVKFSPHRRNLLASCS-YDMTVCLWDFMVEDALV 273 (317)
Q Consensus 210 ~~~~d~~i~v~d~~~~~~~~~~~~~~~---------------~~v~~~~~~~~~~~~l~~~~-~d~~i~vwd~~~~~~~~ 273 (317)
+-..++.|+.|+.... ...+.++. .....++++|++. ++++-. .++.|+.|++.++. +
T Consensus 284 ~d~~~~~I~~~~~~g~---~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~-lyvad~~~~~~I~~~~~~~G~--v 357 (409)
T 3hrp_A 284 SDQNLSSVYKITPDGE---CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN-FYIVDGFKGYCLRKLDILDGY--V 357 (409)
T ss_dssp EETTTTEEEEECTTCC---EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC-EEEEETTTTCEEEEEETTTTE--E
T ss_pred EeCCCCEEEEEecCCC---EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC-EEEEeCCCCCEEEEEECCCCE--E
Confidence 7777889999987643 33333322 3478999999998 777777 78999999976664 2
Q ss_pred eeeecc---------------cceeEeEEEEeccCCeEEEeecCCcEEEEecC
Q 021121 274 GRYDHH---------------TEFAVGVDMSVLVEGLLASTGWDELVYVWQQG 311 (317)
Q Consensus 274 ~~~~~~---------------~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~ 311 (317)
..+.++ -....+++++++ +.++++-..++.|+.++++
T Consensus 358 ~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~-g~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 358 STVAGQVDVASQIDGTPLEATFNYPYDICYDGE-GGYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp EEEEECTTCBSCCCBSTTTCCBSSEEEEEECSS-SEEEEEESTTCEEEEEEEC
T ss_pred EEEeCCCCCCCcCCCChhceEeCCceEEEEcCC-CCEEEEECCCCeEEEEEeC
Confidence 333333 235789999998 7788888888889888763
No 203
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.70 E-value=1.8e-13 Score=109.63 Aligned_cols=239 Identities=8% Similarity=-0.047 Sum_probs=164.0
Q ss_pred CCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCC
Q 021121 60 ADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRP 139 (317)
Q Consensus 60 ~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~ 139 (317)
...+.++++.+++ .+.++...++.|.+|+.. + .... ..+......+.++++.+++. ++++...++.|..+|.. +
T Consensus 19 ~~~p~~i~~d~~g-~l~v~~~~~~~v~~~~~~-~-~~~~-~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~v~~~d~~-g 92 (300)
T 2qc5_A 19 DSGPYGITSSEDG-KVWFTQHKANKISSLDQS-G-RIKE-FEVPTPDAKVMCLIVSSLGD-IWFTENGANKIGKLSKK-G 92 (300)
T ss_dssp TCCEEEEEECTTS-CEEEEETTTTEEEEECTT-S-CEEE-EECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECTT-S
T ss_pred CCCcceeeECCCC-CEEEEcCCCCeEEEECCC-C-ceEE-EECCCCCCcceeEEECCCCC-EEEEecCCCeEEEECCC-C
Confidence 4568899999987 466665567899999976 3 1111 12223346789999999887 77777768899999988 5
Q ss_pred ceeE-EeeccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCcee-eeccCccceEEEEecCCCCcEEEEEecCCcE
Q 021121 140 TSVR-TFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKSI 217 (317)
Q Consensus 140 ~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~-~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i 217 (317)
+... ........+.++++.++ ++++++...++.|..+|.. ++... .+......+..+++++ +++++++...++.|
T Consensus 93 ~~~~~~~~~~~~~~~~i~~~~~-g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~i 169 (300)
T 2qc5_A 93 GFTEYPLPQPDSGPYGITEGLN-GDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGS-DNALWFTENQNNSI 169 (300)
T ss_dssp CEEEEECSSTTCCEEEEEECST-TCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECT-TSSEEEEETTTTEE
T ss_pred CeEEecCCCCCCCCccceECCC-CCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECC-CCCEEEEecCCCeE
Confidence 5432 22223466899999987 7777777768899999987 44432 2232345688999999 88877776667889
Q ss_pred EEEEccCCCccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEE
Q 021121 218 KIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLA 297 (317)
Q Consensus 218 ~v~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 297 (317)
..||. +++........+...+..+++++++. +.++....+.|.+||. +++........+...+.+++++++ +.+++
T Consensus 170 ~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~-g~l~v 245 (300)
T 2qc5_A 170 GRITN-TGKLEEYPLPTNAAAPVGITSGNDGA-LWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKN-SEIWF 245 (300)
T ss_dssp EEECT-TCCEEEEECSSTTCCEEEEEECTTSS-EEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECST-TCEEE
T ss_pred EEECC-CCcEEEeeCCCCCCCcceEEECCCCC-EEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCC-CCEEE
Confidence 99998 44422222223445688999999886 5666556778999998 443222222334456889999998 66666
Q ss_pred EeecCCcEEEEecC
Q 021121 298 STGWDELVYVWQQG 311 (317)
Q Consensus 298 s~~~dg~i~~w~~~ 311 (317)
+...++.|..|+..
T Consensus 246 ~~~~~~~i~~~~~~ 259 (300)
T 2qc5_A 246 TEWGANQIGRITND 259 (300)
T ss_dssp EETTTTEEEEECTT
T ss_pred eccCCCeEEEECCC
Confidence 66567888888863
No 204
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.69 E-value=9.2e-14 Score=111.48 Aligned_cols=225 Identities=11% Similarity=0.067 Sum_probs=150.4
Q ss_pred CeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCce
Q 021121 62 GVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTS 141 (317)
Q Consensus 62 ~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~ 141 (317)
-..+..|+|++..++++...++.|..||...+ . ...+ .....+.+++++++++ ++++ . ++.|.+||.++++.
T Consensus 14 ~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~---~-~~~~-~~~~~~~~i~~~~dG~-l~v~-~-~~~l~~~d~~~g~~ 85 (297)
T 3g4e_A 14 CGESPVWEEVSNSLLFVDIPAKKVCRWDSFTK---Q-VQRV-TMDAPVSSVALRQSGG-YVAT-I-GTKFCALNWKEQSA 85 (297)
T ss_dssp BEEEEEEETTTTEEEEEETTTTEEEEEETTTC---C-EEEE-ECSSCEEEEEEBTTSS-EEEE-E-TTEEEEEETTTTEE
T ss_pred cccCCeEECCCCEEEEEECCCCEEEEEECCCC---c-EEEE-eCCCceEEEEECCCCC-EEEE-E-CCeEEEEECCCCcE
Confidence 34578899976667777778899999998754 2 2222 2356799999999998 5554 3 56899999987765
Q ss_pred eEEeec----cccceEEEEEecCCCCeEEEEeC-----------CCeEEEEeCCCCCceeeeccCccceEEEEecCCCCc
Q 021121 142 VRTFKE----HAYCVYNATWNPRHSDVFCSASG-----------DCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDC 206 (317)
Q Consensus 142 ~~~~~~----~~~~v~~~~~~~~~~~~l~~~~~-----------dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~ 206 (317)
...... ....++.++++|+ ++++++... .+.|..+|.. ++ ...+.......+.++|+| +++
T Consensus 86 ~~~~~~~~~~~~~~~~di~~d~d-G~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~-~~~~~~~~~~pngi~~sp-dg~ 161 (297)
T 3g4e_A 86 VVLATVDNDKKNNRFNDGKVDPA-GRYFAGTMAEETAPAVLERHQGALYSLFPD-HH-VKKYFDQVDISNGLDWSL-DHK 161 (297)
T ss_dssp EEEEECCTTCSSEEEEEEEECTT-SCEEEEEEECCSBTTBCCTTCEEEEEECTT-SC-EEEEEEEESBEEEEEECT-TSC
T ss_pred EEEEecCCCCCCCCCCCEEECCC-CCEEEecCCcccccccccCCCcEEEEEECC-CC-EEEEeeccccccceEEcC-CCC
Confidence 433221 1245889999998 676665422 2345555543 22 333333334568899999 776
Q ss_pred EE-EEEecCCcEEEEEcc--CCCc----cEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeecc
Q 021121 207 LI-ASASVDKSIKIWDVR--NYRV----PIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHH 279 (317)
Q Consensus 207 ~l-~~~~~d~~i~v~d~~--~~~~----~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~ 279 (317)
.+ ++.+.++.|.+||+. ++.. ....+..+......++++++|. +.++....+.|..||..+++ ++..+..+
T Consensus 162 ~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~-lwva~~~~~~v~~~d~~tG~-~~~~i~~p 239 (297)
T 3g4e_A 162 IFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGK-LWVACYNGGRVIRLDPVTGK-RLQTVKLP 239 (297)
T ss_dssp EEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSC-EEEEEETTTEEEEECTTTCC-EEEEEECS
T ss_pred EEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCC-EEEEEcCCCEEEEEcCCCce-EEEEEECC
Confidence 54 556667899999973 3321 1122223345678999999997 66666677889999988776 55666666
Q ss_pred cceeEeEEEE-eccCCeEEEee
Q 021121 280 TEFAVGVDMS-VLVEGLLASTG 300 (317)
Q Consensus 280 ~~~v~~~~~~-~~~~~~l~s~~ 300 (317)
...+++++|. |+++.++++..
T Consensus 240 ~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 240 VDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp SSBEEEEEEESGGGCEEEEEEB
T ss_pred CCCceEEEEeCCCCCEEEEEcC
Confidence 6779999999 77444555544
No 205
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.69 E-value=1.5e-13 Score=110.23 Aligned_cols=228 Identities=10% Similarity=0.078 Sum_probs=150.3
Q ss_pred eeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeEEEEE
Q 021121 10 GYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYD 89 (317)
Q Consensus 10 v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~ 89 (317)
..+..|+|+ ++.++.+... .+.|+.||..... . ..+.....+.++++++++. +++ +. ++.|.+||
T Consensus 15 ~Egp~w~~~-~~~l~~~d~~------~~~i~~~d~~~~~--~---~~~~~~~~~~~i~~~~dG~-l~v-~~-~~~l~~~d 79 (297)
T 3g4e_A 15 GESPVWEEV-SNSLLFVDIP------AKKVCRWDSFTKQ--V---QRVTMDAPVSSVALRQSGG-YVA-TI-GTKFCALN 79 (297)
T ss_dssp EEEEEEETT-TTEEEEEETT------TTEEEEEETTTCC--E---EEEECSSCEEEEEEBTTSS-EEE-EE-TTEEEEEE
T ss_pred ccCCeEECC-CCEEEEEECC------CCEEEEEECCCCc--E---EEEeCCCceEEEEECCCCC-EEE-EE-CCeEEEEE
Confidence 457889995 4556665543 7899999987654 2 2234567899999999984 444 44 56799999
Q ss_pred eCCCCCCCCceeec--cCCcceEEEEEecCCCCEEEEEcC-----------CCEEEEEEcCCCceeEEeeccccceEEEE
Q 021121 90 TALPPTANPIRSLH--EHTREVHSADYNPTRRDSFITSSW-----------DDTVKLWTVDRPTSVRTFKEHAYCVYNAT 156 (317)
Q Consensus 90 ~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~-----------dg~v~iwd~~~~~~~~~~~~~~~~v~~~~ 156 (317)
.+++. ...+.... .....+..++++|+|. ++++... .+.|..++.. ++. ..+.......+.++
T Consensus 80 ~~~g~-~~~~~~~~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~-~~~~~~~~~pngi~ 155 (297)
T 3g4e_A 80 WKEQS-AVVLATVDNDKKNNRFNDGKVDPAGR-YFAGTMAEETAPAVLERHQGALYSLFPD-HHV-KKYFDQVDISNGLD 155 (297)
T ss_dssp TTTTE-EEEEEECCTTCSSEEEEEEEECTTSC-EEEEEEECCSBTTBCCTTCEEEEEECTT-SCE-EEEEEEESBEEEEE
T ss_pred CCCCc-EEEEEecCCCCCCCCCCCEEECCCCC-EEEecCCcccccccccCCCcEEEEEECC-CCE-EEEeeccccccceE
Confidence 86541 11111111 1234578999999998 5554422 2345444443 333 33333445578999
Q ss_pred EecCCCCeEEEEeCCCeEEEEeC--CCCCce-----eeeccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccE
Q 021121 157 WNPRHSDVFCSASGDCTLRIWDV--REMGST-----MIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPI 229 (317)
Q Consensus 157 ~~~~~~~~l~~~~~dg~i~i~d~--~~~~~~-----~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~ 229 (317)
|+|++..++++.+.++.|.+||+ .++... ..+.........+++++ ++++.++...++.|.+||..+++. +
T Consensus 156 ~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~-~G~lwva~~~~~~v~~~d~~tG~~-~ 233 (297)
T 3g4e_A 156 WSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDA-EGKLWVACYNGGRVIRLDPVTGKR-L 233 (297)
T ss_dssp ECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBT-TSCEEEEEETTTEEEEECTTTCCE-E
T ss_pred EcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECC-CCCEEEEEcCCCEEEEEcCCCceE-E
Confidence 99994345566677889999987 344321 12222335678899999 888888887788899999987663 6
Q ss_pred EEEecCCCceeEEEec-CCCCeeEEeeecC
Q 021121 230 AVLNGHGYAVRKVKFS-PHRRNLLASCSYD 258 (317)
Q Consensus 230 ~~~~~~~~~v~~~~~~-~~~~~~l~~~~~d 258 (317)
..+..+...+++++|. |+++.++++...+
T Consensus 234 ~~i~~p~~~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 234 QTVKLPVDKTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp EEEECSSSBEEEEEEESGGGCEEEEEEBCT
T ss_pred EEEECCCCCceEEEEeCCCCCEEEEEcCCc
Confidence 6666666789999998 8888666665544
No 206
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.69 E-value=3.4e-14 Score=116.48 Aligned_cols=174 Identities=16% Similarity=0.124 Sum_probs=132.4
Q ss_pred CeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCC--------CCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEE
Q 021121 62 GVYDLAWSESHDSLLIAAVADGSVKIYDTALPP--------TANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKL 133 (317)
Q Consensus 62 ~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~--------~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~i 133 (317)
.++.+++++.. .++++|+.++ +.+|+++... ..++... ..+.. |+.++| ++. .|+++ .++.|++
T Consensus 39 ~~nlLais~~~-gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~-~~lp~-V~~l~f--d~~-~L~v~-~~~~l~v 110 (388)
T 1xip_A 39 SLQNLDISNSK-SLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWE-KEIPD-VIFVCF--HGD-QVLVS-TRNALYS 110 (388)
T ss_dssp CCBCEEEETTT-TEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEE-EECTT-EEEEEE--ETT-EEEEE-ESSEEEE
T ss_pred cccEEEEcCCC-CEEEEeCCCE-EEEEEhhHhhhhhccccccccceEE-eeCCC-eeEEEE--CCC-EEEEE-cCCcEEE
Confidence 68999999987 5888888875 7779875331 1122222 23566 999999 666 78888 8899999
Q ss_pred EEcCCCceeEEeeccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEec
Q 021121 134 WTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASV 213 (317)
Q Consensus 134 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~ 213 (317)
||+.+.........+..++.++.+.+. .+++++.||.|.+||+.++.... +...|.|++|+| ++ ++.|..
T Consensus 111 ~dv~sl~~~~~~~~~~~~v~~i~~~~p---~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSp-kG--~~vg~~ 180 (388)
T 1xip_A 111 LDLEELSEFRTVTSFEKPVFQLKNVNN---TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTN-SQ--LAVLLK 180 (388)
T ss_dssp EESSSTTCEEEEEECSSCEEEEEECSS---EEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECS-SE--EEEEET
T ss_pred EEchhhhccCccceeecceeeEEecCC---CEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcC-Cc--eEEEEc
Confidence 999887766667777888888887754 28889999999999999776543 446899999999 77 677889
Q ss_pred CCcEEEEEccCCCcc-EEEE------e---cCCCceeEEEecCCCCeeEEe
Q 021121 214 DKSIKIWDVRNYRVP-IAVL------N---GHGYAVRKVKFSPHRRNLLAS 254 (317)
Q Consensus 214 d~~i~v~d~~~~~~~-~~~~------~---~~~~~v~~~~~~~~~~~~l~~ 254 (317)
||.+++|+....... ...+ . +|...|.++.|.+++. ++++
T Consensus 181 dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~-flv~ 230 (388)
T 1xip_A 181 DRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQD-FLAV 230 (388)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSE-EEEE
T ss_pred CCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCe-EEEE
Confidence 999999988765421 2334 2 3778999999999887 5555
No 207
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.68 E-value=1.7e-13 Score=114.72 Aligned_cols=234 Identities=7% Similarity=0.020 Sum_probs=158.8
Q ss_pred ceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCC--eEE
Q 021121 9 NGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADG--SVK 86 (317)
Q Consensus 9 ~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg--~i~ 86 (317)
.+..++|+| ++.+.++... ++.|++||.+... ...+. ....... ++|+|+++ .|+++..++ .|.
T Consensus 132 ~P~~la~d~--~g~lyv~d~~------~~~I~~id~~~g~--~~~~~--~~~~~~~-ia~~~~g~-~l~~~d~~~~~~I~ 197 (409)
T 3hrp_A 132 YMWGIAAVG--NNTVLAYQRD------DPRVRLISVDDNK--VTTVH--PGFKGGK-PAVTKDKQ-RVYSIGWEGTHTVY 197 (409)
T ss_dssp CEEEEEECS--TTEEEEEETT------TTEEEEEETTTTE--EEEEE--ETCCBCB-CEECTTSS-EEEEEBSSTTCEEE
T ss_pred CceEEEEeC--CCCEEEEecC------CCcEEEEECCCCE--EEEee--ccCCCCc-eeEecCCC-cEEEEecCCCceEE
Confidence 577899999 6777777654 7899999987653 22222 2223334 99999984 777776655 788
Q ss_pred EEEeCCCCCCCCceee----ccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEE----eeccccce-E-EEE
Q 021121 87 IYDTALPPTANPIRSL----HEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRT----FKEHAYCV-Y-NAT 156 (317)
Q Consensus 87 v~~~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~----~~~~~~~v-~-~~~ 156 (317)
+++.... .....+ ......+.+++++|++. .|+.+..++.|+.||..++..... .......- . .++
T Consensus 198 ~~d~~~~---~~~~~~g~~~~~~~~~p~~iav~p~~g-~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia 273 (409)
T 3hrp_A 198 VYMKASG---WAPTRIGQLGSTFSGKIGAVALDETEE-WLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLI 273 (409)
T ss_dssp EEEGGGT---TCEEEEEECCTTSCSCCCBCEECTTSS-EEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEE
T ss_pred EEEcCCC---ceeEEeeeccchhcCCcEEEEEeCCCC-eEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEE
Confidence 8887643 222222 21446678899999555 455577789999999987754322 11122211 3 999
Q ss_pred EecCCCCeEEEEeCCCeEEEEeCCCCCceeeeccCc---------------cceEEEEecCCCCcEEEEEe-cCCcEEEE
Q 021121 157 WNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHE---------------FEILACDWNKYDDCLIASAS-VDKSIKIW 220 (317)
Q Consensus 157 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~---------------~~v~~i~~~~~~~~~l~~~~-~d~~i~v~ 220 (317)
|+|+++.++++-..++.|+.|+.... ...+.++. .....++++| +++++++-. .++.|+.|
T Consensus 274 ~~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~-dG~lyvad~~~~~~I~~~ 350 (409)
T 3hrp_A 274 YYFVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDE-DGNFYIVDGFKGYCLRKL 350 (409)
T ss_dssp EETTTTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECT-TCCEEEEETTTTCEEEEE
T ss_pred EeCCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeC-CCCEEEEeCCCCCEEEEE
Confidence 99975777777778899999997643 22332221 3468899999 888888877 78999999
Q ss_pred EccCCCccEEEEecC---------------CCceeEEEecCCCCeeEEeeecCCeEEEEec
Q 021121 221 DVRNYRVPIAVLNGH---------------GYAVRKVKFSPHRRNLLASCSYDMTVCLWDF 266 (317)
Q Consensus 221 d~~~~~~~~~~~~~~---------------~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~ 266 (317)
|+.++. +..+.++ -.....++++|++. ++++-..++.|+.+++
T Consensus 351 ~~~~G~--v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~-lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 351 DILDGY--VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGG-YWIAEAWGKAIRKYAV 408 (409)
T ss_dssp ETTTTE--EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSE-EEEEESTTCEEEEEEE
T ss_pred ECCCCE--EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCC-EEEEECCCCeEEEEEe
Confidence 976654 4444443 13578999999975 7777777888887765
No 208
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.68 E-value=4.2e-14 Score=115.98 Aligned_cols=174 Identities=11% Similarity=0.075 Sum_probs=128.5
Q ss_pred ceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCC-------CcceeeeeecCCCCeeEEEecCCCCCeEEEEEc
Q 021121 9 NGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAA-------PALTELVAFDTADGVYDLAWSESHDSLLIAAVA 81 (317)
Q Consensus 9 ~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 81 (317)
++..+++++. .+.+++++. + .+.+|+++.-. ...........+. |+.++| ++ .+|+++ .
T Consensus 39 ~~nlLais~~-~gll~a~~~-------~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~-~~L~v~-~ 104 (388)
T 1xip_A 39 SLQNLDISNS-KSLFVAASG-------S-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HG-DQVLVS-T 104 (388)
T ss_dssp CCBCEEEETT-TTEEEEEET-------T-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ET-TEEEEE-E
T ss_pred cccEEEEcCC-CCEEEEeCC-------C-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CC-CEEEEE-c
Confidence 5889999994 455444443 3 77779875321 0122223345666 999999 66 688888 8
Q ss_pred CCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeeccccceEEEEEecCC
Q 021121 82 DGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRH 161 (317)
Q Consensus 82 dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 161 (317)
++.|++||+... ........|..++.++.+.+. .+++++.||.|.+||+.++.... +...|.+++|+|+
T Consensus 105 ~~~l~v~dv~sl---~~~~~~~~~~~~v~~i~~~~p---~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpk- 173 (388)
T 1xip_A 105 RNALYSLDLEEL---SEFRTVTSFEKPVFQLKNVNN---TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNS- 173 (388)
T ss_dssp SSEEEEEESSST---TCEEEEEECSSCEEEEEECSS---EEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSS-
T ss_pred CCcEEEEEchhh---hccCccceeecceeeEEecCC---CEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCC-
Confidence 899999999865 333445567778888877654 38888999999999999877643 4567999999998
Q ss_pred CCeEEEEeCCCeEEEEeCCCCCc--eeee------c---cCccceEEEEecCCCCcEEEE
Q 021121 162 SDVFCSASGDCTLRIWDVREMGS--TMII------P---AHEFEILACDWNKYDDCLIAS 210 (317)
Q Consensus 162 ~~~l~~~~~dg~i~i~d~~~~~~--~~~~------~---~~~~~v~~i~~~~~~~~~l~~ 210 (317)
+ ++.|..||++++|+....+. ...+ . +|...|.++.|.+ ++.++++
T Consensus 174 G--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~-~~~flv~ 230 (388)
T 1xip_A 174 Q--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILS-PQDFLAV 230 (388)
T ss_dssp E--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESS-SSEEEEE
T ss_pred c--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEec-CCeEEEE
Confidence 5 67899999999999887664 4445 2 3678899999999 8888776
No 209
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.66 E-value=3.3e-13 Score=110.24 Aligned_cols=262 Identities=10% Similarity=0.056 Sum_probs=166.4
Q ss_pred CceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEE----------cCCeEEEEEeCCCCCCCCceeeccC
Q 021121 36 NGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAV----------ADGSVKIYDTALPPTANPIRSLHEH 105 (317)
Q Consensus 36 ~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~----------~dg~i~v~~~~~~~~~~~~~~~~~~ 105 (317)
++.|.++|..+.. .+.......... ++++|++. .++++. .++.|.+||..+. +....+...
T Consensus 58 ~~~V~ViD~~t~~----v~~~I~vG~~P~-va~spDG~-~lyVan~~~~r~~~G~~~~~VsviD~~t~---~v~~~I~v~ 128 (386)
T 3sjl_D 58 VTQQFVIDGEAGR----VIGMIDGGFLPN-PVVADDGS-FIAHASTVFSRIARGERTDYVEVFDPVTL---LPTADIELP 128 (386)
T ss_dssp SEEEEEEETTTTE----EEEEEEECSSCE-EEECTTSS-CEEEEEEEEEETTEEEEEEEEEEECTTTC---CEEEEEEET
T ss_pred CCEEEEEECCCCe----EEEEEECCCCCc-EEECCCCC-EEEEEcccccccccCCCCCEEEEEECCCC---eEEEEEECC
Confidence 5699999988754 222222222234 99999995 554443 3678999998876 444443211
Q ss_pred -------CcceEEEEEecCCCCEEEEEc--CCCEEEEEEcCCCceeEEeeccccceEEEEEecCCCCeEEEEeCCCeEEE
Q 021121 106 -------TREVHSADYNPTRRDSFITSS--WDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRI 176 (317)
Q Consensus 106 -------~~~v~~~~~~~~~~~~l~~~~--~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i 176 (317)
......+.|+|+|+ +++++. .++.|.++|+.+++.+.++..... ....|.+...+++.+.||++.+
T Consensus 129 ~g~r~~~g~~P~~~a~spDGk-~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~----~~~~P~g~~~~~~~~~DG~~~~ 203 (386)
T 3sjl_D 129 DAPRFLVGTYPWMTSLTPDGK-TLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC----YHIFPTAPDTFFMHCRDGSLAK 203 (386)
T ss_dssp TCCCCCBSCCGGGEEECTTSS-EEEEEECSSSCEEEEEETTTTEEEEEEECCSE----EEEEEEETTEEEEEETTSCEEE
T ss_pred CccccccCCCCceEEEcCCCC-EEEEEEcCCCCeEEEEECCCCcEEEEEECCCc----ceeecCCCceeEEECCCCCEEE
Confidence 12345689999998 666554 368999999999999888864221 2233554677778889999999
Q ss_pred EeCCC-CCceeeecc----Cccce-EEEEecCCCCcEEEEEecCCcEEEEEccCCCcc-EEEEe----------cCCCce
Q 021121 177 WDVRE-MGSTMIIPA----HEFEI-LACDWNKYDDCLIASASVDKSIKIWDVRNYRVP-IAVLN----------GHGYAV 239 (317)
Q Consensus 177 ~d~~~-~~~~~~~~~----~~~~v-~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~-~~~~~----------~~~~~v 239 (317)
.++.+ ++....... ...++ ....|.+.++++++ .+.+|.+++.|..+.... ...+. ......
T Consensus 204 v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~ 282 (386)
T 3sjl_D 204 VAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGW 282 (386)
T ss_dssp EECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSS
T ss_pred EECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCc
Confidence 99876 444221111 11222 12455433776555 455899999999765421 11111 012234
Q ss_pred eEEEecCCCCeeEEeeec---------CCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEe-ecCCcEEEEe
Q 021121 240 RKVKFSPHRRNLLASCSY---------DMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLAST-GWDELVYVWQ 309 (317)
Q Consensus 240 ~~~~~~~~~~~~l~~~~~---------d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~-~~dg~i~~w~ 309 (317)
..++++|++++++++-.. .+.|.+.|+.+.+. +..+.- ...+.++++++++..+|++. ..++.|.++|
T Consensus 283 q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv-~~~i~v-g~~~~~lavs~D~~~~ly~tn~~~~~VsViD 360 (386)
T 3sjl_D 283 QQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGER-LAKFEM-GHEIDSINVSQDEKPLLYALSTGDKTLYIHD 360 (386)
T ss_dssp SCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCE-EEEEEE-EEEECEEEECSSSSCEEEEEETTTTEEEEEE
T ss_pred ceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeE-EEEEEC-CCCcceEEECCCCCeEEEEEcCCCCeEEEEE
Confidence 468889998865544321 25799999999874 444443 23688999999943366654 5689999999
Q ss_pred cCCCC
Q 021121 310 QGMDP 314 (317)
Q Consensus 310 ~~~~~ 314 (317)
..+..
T Consensus 361 ~~t~k 365 (386)
T 3sjl_D 361 AESGE 365 (386)
T ss_dssp TTTCC
T ss_pred CCCCc
Confidence 97653
No 210
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.66 E-value=2.7e-13 Score=122.39 Aligned_cols=246 Identities=17% Similarity=0.117 Sum_probs=152.7
Q ss_pred ceeEEEEecCCCCeEEEEEecccccccC--ceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCC---
Q 021121 9 NGYSVKFSPFYESRLAVATAQNFGILGN--GRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADG--- 83 (317)
Q Consensus 9 ~v~~~~~~p~~~~~~~~~~~~~~~~~~~--g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg--- 83 (317)
.+..++||| +++.++...... ++ ..|++||+..+.. .... .....+..++|+|| + .|+.++.++
T Consensus 164 ~~~~~~~SP--DG~~la~~~~~~---G~e~~~i~v~dl~tg~~--~~~~--~~~~~~~~~~wspD-~-~l~~~~~~~~~~ 232 (741)
T 1yr2_A 164 ALDAWAASD--DGRLLAYSVQDG---GSDWRTVKFVGVADGKP--LADE--LKWVKFSGLAWLGN-D-ALLYSRFAEPKE 232 (741)
T ss_dssp EEEEEEECT--TSSEEEEEEEET---TCSEEEEEEEETTTCCE--EEEE--EEEEESCCCEESTT-S-EEEEEECCCC--
T ss_pred EEEeEEECC--CCCEEEEEEcCC---CCceEEEEEEECCCCCC--CCcc--CCCceeccEEEECC-C-EEEEEEecCccc
Confidence 577899999 455444433210 11 4699999988763 1111 11112357899999 5 555555544
Q ss_pred -----------eEEEEEeCCCCCC-CCceeeccCCcceEEEEEecCCCCEEEEEcCC-----CEEEEEEcCCC--ceeEE
Q 021121 84 -----------SVKIYDTALPPTA-NPIRSLHEHTREVHSADYNPTRRDSFITSSWD-----DTVKLWTVDRP--TSVRT 144 (317)
Q Consensus 84 -----------~i~v~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~v~iwd~~~~--~~~~~ 144 (317)
.|.+|++.++... ..+.....+...+..+.|+|+|+ +|+..+.+ ..|++||+.++ +....
T Consensus 233 ~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~-~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 311 (741)
T 1yr2_A 233 GQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGR-WVVITSSEGTDPVNTVHVARVTNGKIGPVTA 311 (741)
T ss_dssp ------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSC-EEEEEEECTTCSCCEEEEEEEETTEECCCEE
T ss_pred ccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCC-EEEEEEEccCCCcceEEEEECCCCCCcccEE
Confidence 3888887654211 11222223334588999999998 66655543 48999999877 41455
Q ss_pred eeccccceEEEEEecCCCCeEEEEeC----CCeEEEEeCCCC--CceeeeccCccceEEEEecCCCCcEEEEEecCCcEE
Q 021121 145 FKEHAYCVYNATWNPRHSDVFCSASG----DCTLRIWDVREM--GSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIK 218 (317)
Q Consensus 145 ~~~~~~~v~~~~~~~~~~~~l~~~~~----dg~i~i~d~~~~--~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~ 218 (317)
+..+........ .|+ ++.|+..+. ++.|.+||+.++ +....+..+...+..+.+. ++.++++...|+..+
T Consensus 312 l~~~~~~~~~~~-~~d-g~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~ 387 (741)
T 1yr2_A 312 LIPDLKAQWDFV-DGV-GDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA--GNRLFASYIHDAKSQ 387 (741)
T ss_dssp EECSSSSCEEEE-EEE-TTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE--BTEEEEEEEETTEEE
T ss_pred ecCCCCceEEEE-ecc-CCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE--CCEEEEEEEECCEEE
Confidence 554544455443 477 566666554 455999999874 2233344444456677776 567888888899877
Q ss_pred EEEccCCCccEEEEec-CCCceeEEEecCCCCeeEEeee---cCCeEEEEeccccc
Q 021121 219 IWDVRNYRVPIAVLNG-HGYAVRKVKFSPHRRNLLASCS---YDMTVCLWDFMVED 270 (317)
Q Consensus 219 v~d~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~---~d~~i~vwd~~~~~ 270 (317)
+|.+.........+.. +...+..+.++|+++.++++.+ ..++|.+||+.+++
T Consensus 388 l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 388 VLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp EEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred EEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 7765522223444443 3567889999999886555444 34789999998765
No 211
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.66 E-value=2.9e-13 Score=112.52 Aligned_cols=260 Identities=11% Similarity=0.059 Sum_probs=168.7
Q ss_pred ceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEE----------cCCeEEEEEeCCCCCCCCceeeccC-
Q 021121 37 GRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAV----------ADGSVKIYDTALPPTANPIRSLHEH- 105 (317)
Q Consensus 37 g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~----------~dg~i~v~~~~~~~~~~~~~~~~~~- 105 (317)
+.|.++|..+.. .+..+.....- .++++|++. .++++. .++.|.++|..+. +.+..+.-.
T Consensus 99 ~~VsVID~~t~~----vv~~I~vG~~P-gia~SpDgk-~lyVan~~~~~~~~G~~~~~VsviD~~t~---~vv~~I~v~g 169 (426)
T 3c75_H 99 TQQFVIDGSTGR----ILGMTDGGFLP-HPVAAEDGS-FFAQASTVFERIARGKRTDYVEVFDPVTF---LPIADIELPD 169 (426)
T ss_dssp EEEEEEETTTTE----EEEEEEECSSC-EEEECTTSS-CEEEEEEEEEETTEEEEEEEEEEECTTTC---CEEEEEEETT
T ss_pred CeEEEEECCCCE----EEEEEECCCCC-ceEECCCCC-EEEEEeccccccccCCCCCEEEEEECCCC---cEEEEEECCC
Confidence 799999998764 22323222233 899999995 555443 4678999998765 444433211
Q ss_pred ------CcceEEEEEecCCCCEEEEEcC--CCEEEEEEcCCCceeEEeeccccceEEEEEecCCCCeEEEEeCCCeEEEE
Q 021121 106 ------TREVHSADYNPTRRDSFITSSW--DDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIW 177 (317)
Q Consensus 106 ------~~~v~~~~~~~~~~~~l~~~~~--dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~ 177 (317)
......+.++|+++ +++++.. ++.|.+.|+.+++.+..+..... ....|++...+++.+.||.+.+.
T Consensus 170 ~~r~~~g~~P~~~~~spDGk-~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~----~~~~p~g~~~~v~~~~dG~~~~V 244 (426)
T 3c75_H 170 APRFLVGTYQWMNALTPDNK-NLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC----YHIFPASPTVFYMNCRDGSLARV 244 (426)
T ss_dssp CCCCCBSCCGGGSEECTTSS-EEEEEECSSSCEEEEEETTTTEEEEEEECCSE----EEEEEEETTEEEEEETTSSEEEE
T ss_pred ccccccCCCcceEEEcCCCC-EEEEEecCCCCeEEEEECCCCeEEEEEEcCCc----eeeccCCCcEEEEEcCCCCEEEE
Confidence 12345689999998 6666553 68999999999998888764321 33445545677778888988888
Q ss_pred eCCCCCceee----eccCccce-EEEEecCCCCcEEEEEecCCcEEEEEccCCCccE-EEEe---c-------CCCceeE
Q 021121 178 DVREMGSTMI----IPAHEFEI-LACDWNKYDDCLIASASVDKSIKIWDVRNYRVPI-AVLN---G-------HGYAVRK 241 (317)
Q Consensus 178 d~~~~~~~~~----~~~~~~~v-~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~-~~~~---~-------~~~~v~~ 241 (317)
+..+++.... +.....++ ..+.+.+ ++..++.....+.+.+.|.......+ ..+. . .......
T Consensus 245 ~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~-dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~ 323 (426)
T 3c75_H 245 DFADGETKVTNTEVFHTEDELLINHPAFSL-RSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQ 323 (426)
T ss_dssp ECCTTCCEEEECCCCSCTTSCBCSCCEECT-TTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSC
T ss_pred ECCCCcEEEEeeeeeccCCCceeeEeeecC-CCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCcee
Confidence 8855544421 11111221 2356788 66666666778999999987543111 0010 0 0112234
Q ss_pred EEecCCCCeeEEeeec---------CCeEEEEecccccceeeeeecccceeEeEEEEeccCC-eEEEee-cCCcEEEEec
Q 021121 242 VKFSPHRRNLLASCSY---------DMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEG-LLASTG-WDELVYVWQQ 310 (317)
Q Consensus 242 ~~~~~~~~~~l~~~~~---------d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~s~~-~dg~i~~w~~ 310 (317)
++++|++++++++... ++.|.+.|+.+.+ .+..+.. .....++.|+|+ ++ ++++.. .++.|.++|+
T Consensus 324 va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~k-vv~~I~v-g~~P~gia~spD-g~~~lyv~n~~s~~VsVID~ 400 (426)
T 3c75_H 324 TAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGE-RINKIEL-GHEIDSINVSQD-AEPLLYALSAGTQTLHIYDA 400 (426)
T ss_dssp EEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCC-EEEEEEE-EEEECEEEECCS-SSCEEEEEETTTTEEEEEET
T ss_pred eEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCe-EEEEEEC-CCCcCeEEEccC-CCEEEEEEcCCCCeEEEEEC
Confidence 7899998865554331 3579999999987 4455543 235789999999 55 777777 5999999999
Q ss_pred CCCC
Q 021121 311 GMDP 314 (317)
Q Consensus 311 ~~~~ 314 (317)
.+.+
T Consensus 401 ~t~k 404 (426)
T 3c75_H 401 ATGE 404 (426)
T ss_dssp TTCC
T ss_pred CCCC
Confidence 7754
No 212
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.62 E-value=3.8e-12 Score=103.41 Aligned_cols=226 Identities=12% Similarity=0.052 Sum_probs=145.0
Q ss_pred eeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeEEEEE
Q 021121 10 GYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYD 89 (317)
Q Consensus 10 v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~ 89 (317)
..+..|+|+ .+.++.+... ++.|..|+..... . ..+.....+.+++|+|++ .+++ ++.+ .|.+||
T Consensus 51 ~egp~~~~~-~~~l~~~d~~------~~~i~~~d~~~~~--~---~~~~~~~~v~~i~~~~dg-~l~v-~~~~-gl~~~d 115 (326)
T 2ghs_A 51 GEGPTFDPA-SGTAWWFNIL------ERELHELHLASGR--K---TVHALPFMGSALAKISDS-KQLI-ASDD-GLFLRD 115 (326)
T ss_dssp EEEEEEETT-TTEEEEEEGG------GTEEEEEETTTTE--E---EEEECSSCEEEEEEEETT-EEEE-EETT-EEEEEE
T ss_pred CcCCeEeCC-CCEEEEEECC------CCEEEEEECCCCc--E---EEEECCCcceEEEEeCCC-eEEE-EECC-CEEEEE
Confidence 457899995 3555555543 7899999987643 2 222345679999999997 3554 4444 488999
Q ss_pred eCCCCCCCCceeec--cCCcceEEEEEecCCCCEEEEEcC------CCEEEEEEcCCCceeEEeeccccceEEEEEecCC
Q 021121 90 TALPPTANPIRSLH--EHTREVHSADYNPTRRDSFITSSW------DDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRH 161 (317)
Q Consensus 90 ~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~------dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 161 (317)
...++ ...+.... .....+.+++++|+|. ++++... .+.|..++ +++. ..+.........++|+|+
T Consensus 116 ~~~g~-~~~~~~~~~~~~~~~~~~i~~d~~G~-l~v~~~~~~~~~~~~~l~~~~--~g~~-~~~~~~~~~~~~i~~s~d- 189 (326)
T 2ghs_A 116 TATGV-LTLHAELESDLPGNRSNDGRMHPSGA-LWIGTMGRKAETGAGSIYHVA--KGKV-TKLFADISIPNSICFSPD- 189 (326)
T ss_dssp TTTCC-EEEEECSSTTCTTEEEEEEEECTTSC-EEEEEEETTCCTTCEEEEEEE--TTEE-EEEEEEESSEEEEEECTT-
T ss_pred CCCCc-EEEEeeCCCCCCCCCCCCEEECCCCC-EEEEeCCCcCCCCceEEEEEe--CCcE-EEeeCCCcccCCeEEcCC-
Confidence 76541 11111111 1124688999999997 5554432 25666666 4443 333333345789999999
Q ss_pred CCe-EEEEeCCCeEEEEeCC--CC-Cc-----eeeeccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEE
Q 021121 162 SDV-FCSASGDCTLRIWDVR--EM-GS-----TMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVL 232 (317)
Q Consensus 162 ~~~-l~~~~~dg~i~i~d~~--~~-~~-----~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 232 (317)
++. +++.+.++.|.+||+. ++ +. ...+......+..+++++ +++++++...++.|.+||.. ++ .+..+
T Consensus 190 g~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~-~G~lwva~~~~~~v~~~d~~-g~-~~~~i 266 (326)
T 2ghs_A 190 GTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDA-EGHIWNARWGEGAVDRYDTD-GN-HIARY 266 (326)
T ss_dssp SCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECT-TSCEEEEEETTTEEEEECTT-CC-EEEEE
T ss_pred CCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECC-CCCEEEEEeCCCEEEEECCC-CC-EEEEE
Confidence 554 4555667899999986 44 22 112222334567899998 88887777667889999983 34 35566
Q ss_pred ecCCCceeEEEec-CCCCeeEEeeecCC
Q 021121 233 NGHGYAVRKVKFS-PHRRNLLASCSYDM 259 (317)
Q Consensus 233 ~~~~~~v~~~~~~-~~~~~~l~~~~~d~ 259 (317)
..+...+++++|+ |+++.++++...++
T Consensus 267 ~~~~~~~~~~af~g~d~~~L~vt~~~~~ 294 (326)
T 2ghs_A 267 EVPGKQTTCPAFIGPDASRLLVTSAREH 294 (326)
T ss_dssp ECSCSBEEEEEEESTTSCEEEEEEBCTT
T ss_pred ECCCCCcEEEEEecCCCCEEEEEecCCC
Confidence 6666679999998 88875555554443
No 213
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.61 E-value=4.9e-12 Score=102.77 Aligned_cols=224 Identities=7% Similarity=-0.072 Sum_probs=146.3
Q ss_pred eeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCcee
Q 021121 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSV 142 (317)
Q Consensus 63 v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~ 142 (317)
.....|+|+++.++++...++.|..|+...+ + ...+. ....+.++.|++++. ++++ +.+ .|.+||.++++..
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~---~-~~~~~-~~~~v~~i~~~~dg~-l~v~-~~~-gl~~~d~~~g~~~ 122 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASG---R-KTVHA-LPFMGSALAKISDSK-QLIA-SDD-GLFLRDTATGVLT 122 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTT---E-EEEEE-CSSCEEEEEEEETTE-EEEE-ETT-EEEEEETTTCCEE
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCC---c-EEEEE-CCCcceEEEEeCCCe-EEEE-ECC-CEEEEECCCCcEE
Confidence 4678899986667777777899999998654 2 22222 346799999999987 5554 334 5999999887654
Q ss_pred EEeec----cccceEEEEEecCCCCeEEEEeC------CCeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEE-EEE
Q 021121 143 RTFKE----HAYCVYNATWNPRHSDVFCSASG------DCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLI-ASA 211 (317)
Q Consensus 143 ~~~~~----~~~~v~~~~~~~~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l-~~~ 211 (317)
..... ....+..++++|+ ++++++... .+.|..++ +++. ..+.........++|+| +++.+ ++.
T Consensus 123 ~~~~~~~~~~~~~~~~i~~d~~-G~l~v~~~~~~~~~~~~~l~~~~--~g~~-~~~~~~~~~~~~i~~s~-dg~~lyv~~ 197 (326)
T 2ghs_A 123 LHAELESDLPGNRSNDGRMHPS-GALWIGTMGRKAETGAGSIYHVA--KGKV-TKLFADISIPNSICFSP-DGTTGYFVD 197 (326)
T ss_dssp EEECSSTTCTTEEEEEEEECTT-SCEEEEEEETTCCTTCEEEEEEE--TTEE-EEEEEEESSEEEEEECT-TSCEEEEEE
T ss_pred EEeeCCCCCCCCCCCCEEECCC-CCEEEEeCCCcCCCCceEEEEEe--CCcE-EEeeCCCcccCCeEEcC-CCCEEEEEE
Confidence 33221 1246899999998 676655432 25566666 3432 33322333567899999 77655 444
Q ss_pred ecCCcEEEEEcc--CC-Cc----cEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeecccceeE
Q 021121 212 SVDKSIKIWDVR--NY-RV----PIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAV 284 (317)
Q Consensus 212 ~~d~~i~v~d~~--~~-~~----~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~ 284 (317)
+.++.|.+||+. ++ .. ....+.........++++++|. +.++...++.|.+||. +++ ....+..+...++
T Consensus 198 ~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~-lwva~~~~~~v~~~d~-~g~-~~~~i~~~~~~~~ 274 (326)
T 2ghs_A 198 TKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGH-IWNARWGEGAVDRYDT-DGN-HIARYEVPGKQTT 274 (326)
T ss_dssp TTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSC-EEEEEETTTEEEEECT-TCC-EEEEEECSCSBEE
T ss_pred CCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCC-EEEEEeCCCEEEEECC-CCC-EEEEEECCCCCcE
Confidence 557899999985 43 21 1122222345678899999997 5665556688999998 444 4455666666799
Q ss_pred eEEEE-eccCCeEEEeecC
Q 021121 285 GVDMS-VLVEGLLASTGWD 302 (317)
Q Consensus 285 ~~~~~-~~~~~~l~s~~~d 302 (317)
+++|+ ++++.++++...+
T Consensus 275 ~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 275 CPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp EEEEESTTSCEEEEEEBCT
T ss_pred EEEEecCCCCEEEEEecCC
Confidence 99998 7733344554444
No 214
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.59 E-value=8.6e-13 Score=108.04 Aligned_cols=244 Identities=6% Similarity=-0.019 Sum_probs=155.2
Q ss_pred ceeeeeecCCCCeeEEEecCCCCCeEEEEE--cCCeEEEEEeCCCCCCCCc----eeeccCCcceEEEEEecCCCCEEEE
Q 021121 51 LTELVAFDTADGVYDLAWSESHDSLLIAAV--ADGSVKIYDTALPPTANPI----RSLHEHTREVHSADYNPTRRDSFIT 124 (317)
Q Consensus 51 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--~dg~i~v~~~~~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~~l~~ 124 (317)
++.+..+. ..+..++++|++ +++++.. .++.++||.+..+ ...+. .....+-..+..+++++++. ++++
T Consensus 9 ~~~v~~~~--~~p~~va~~~~g-~~~v~~~~~~~~~~~l~~~~~g-~~~~~p~~~~~~~~~~~~p~gv~~d~~g~-L~v~ 83 (343)
T 2qe8_A 9 LEVVAELS--LAPGNITLTPDG-RLFLSLHQFYQPEMQVAELTQD-GLIPFPPQSGNAIITFDTVLGIKSDGNGI-VWML 83 (343)
T ss_dssp CEEEEEES--SCEEEEEECTTS-CEEEEECGGGCCSCSEEEEETT-EEEESCCCCSSCCCCCSCEEEEEECSSSE-EEEE
T ss_pred eEEEEEcC--CCcceEEECCCC-CEEEEeCCCCCCceEEEEECCC-CeecCCCcccCcccceeEeeEEEEcCCCc-EEEE
Confidence 34444333 578999999998 5777653 2343666666522 11100 11123556899999999986 5554
Q ss_pred EcC-----CCEEEEEEcCCCceeEEeecc------ccceEEEEEecCCCCeEEEEe---CCCeEEEEeCCCCCceeeecc
Q 021121 125 SSW-----DDTVKLWTVDRPTSVRTFKEH------AYCVYNATWNPRHSDVFCSAS---GDCTLRIWDVREMGSTMIIPA 190 (317)
Q Consensus 125 ~~~-----dg~v~iwd~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~l~~~~---~dg~i~i~d~~~~~~~~~~~~ 190 (317)
-.. ++.|.+||+.+++.+..+... ...+..++++++++.++++.. .++.|.+||+.+++..+.+..
T Consensus 84 D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~ 163 (343)
T 2qe8_A 84 DNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQG 163 (343)
T ss_dssp ECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTT
T ss_pred cCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecC
Confidence 433 579999999998877666432 235689999987455556655 678999999987765554422
Q ss_pred C-----------------------------ccceEEEEecCCCCcEEEEEecCC-cEEEEEccCCCc----------cEE
Q 021121 191 H-----------------------------EFEILACDWNKYDDCLIASASVDK-SIKIWDVRNYRV----------PIA 230 (317)
Q Consensus 191 ~-----------------------------~~~v~~i~~~~~~~~~l~~~~~d~-~i~v~d~~~~~~----------~~~ 230 (317)
| ...+..++++| +++.|+.+...+ .+..++...... .+.
T Consensus 164 ~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~-dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 242 (343)
T 2qe8_A 164 YPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDA-ENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIE 242 (343)
T ss_dssp CTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECT-TSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCE
T ss_pred CCcccccccceeECCEEEEeccCCCceeceecccceeEecc-CCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceE
Confidence 1 02357899999 888777776555 565555431100 011
Q ss_pred EEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeee-cccceeEeEEEEeccCCeEEEeecCCc
Q 021121 231 VLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYD-HHTEFAVGVDMSVLVEGLLASTGWDEL 304 (317)
Q Consensus 231 ~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~dg~ 304 (317)
..++......++++++|. ++++...++.|.+||..+++ ...... .+.....+++|.++ +.++++.+..+.
T Consensus 243 -~~g~~g~pdgia~d~~G~-l~va~~~~~~V~~~d~~~G~-~~~~~~~~~~~~p~~va~~~~-g~l~v~~~~~~~ 313 (343)
T 2qe8_A 243 -RYSEKPICDGISIDKDHN-IYVGDLAHSAIGVITSADRA-YKLLVTDEKLSWTDSFNFGSD-GYLYFDCNQLHH 313 (343)
T ss_dssp -EEEECCSCSCEEECTTCC-EEEEEGGGTEEEEEETTTTE-EEEEEECGGGSCEEEEEECTT-SCEEEEECCGGG
T ss_pred -ecccCCCCceEEECCCCC-EEEEccCCCeEEEEECCCCC-EEEEEECCceecCCeeEECCC-CcEEEEeCcccc
Confidence 113334567899999987 78888888999999984444 222222 22456889999987 677777664433
No 215
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.58 E-value=4.7e-12 Score=101.92 Aligned_cols=228 Identities=11% Similarity=0.016 Sum_probs=151.3
Q ss_pred cCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcC
Q 021121 58 DTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVD 137 (317)
Q Consensus 58 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~ 137 (317)
..........|+|+++.+++++..++.|..|+.. + ....+..+...+..++++++|+ ++++...++.|.+|+.+
T Consensus 42 ~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g----~~~~~~~~~~~~~gl~~d~dG~-l~v~~~~~~~v~~~~~~ 115 (305)
T 3dr2_A 42 DQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-G----TVDVLLDATAFTNGNAVDAQQR-LVHCEHGRRAITRSDAD 115 (305)
T ss_dssp CCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-S----CEEEEEESCSCEEEEEECTTSC-EEEEETTTTEEEEECTT
T ss_pred cCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-C----CEEEEeCCCCccceeeECCCCC-EEEEECCCCEEEEECCC
Confidence 3445677899999986577888788999999863 2 2344445667789999999987 66666667899999986
Q ss_pred CCceeEEeecc----ccceEEEEEecCCCCeEEE----EeC-------------CCeEEEEeCCCCCceeeeccCccceE
Q 021121 138 RPTSVRTFKEH----AYCVYNATWNPRHSDVFCS----ASG-------------DCTLRIWDVREMGSTMIIPAHEFEIL 196 (317)
Q Consensus 138 ~~~~~~~~~~~----~~~v~~~~~~~~~~~~l~~----~~~-------------dg~i~i~d~~~~~~~~~~~~~~~~v~ 196 (317)
++........ ...+..+++.|+ +++.++ |.. .+.|..+|..+++..... ......
T Consensus 116 -g~~~~~~~~~~~~~~~~~~~i~~d~d-G~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~ 191 (305)
T 3dr2_A 116 -GQAHLLVGRYAGKRLNSPNDLIVARD-GAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPN 191 (305)
T ss_dssp -SCEEEEECEETTEECSCCCCEEECTT-SCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEE
T ss_pred -CCEEEEEeccCCCccCCCCCEEECCC-CCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCc
Confidence 5432222111 124678999998 777775 332 356888888766554433 334567
Q ss_pred EEEecCCCCcEEEEEecC------CcEEEEEccCCCcc-EEE-EecCCCceeEEEecCCCCeeEEeeecCCeEEEEeccc
Q 021121 197 ACDWNKYDDCLIASASVD------KSIKIWDVRNYRVP-IAV-LNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMV 268 (317)
Q Consensus 197 ~i~~~~~~~~~l~~~~~d------~~i~v~d~~~~~~~-~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~ 268 (317)
.++|+| +++.|+.+... +.|.+||+...... ... ..........++++++|. +.++ ..+ .|.+|+..
T Consensus 192 gl~~sp-dg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~-lwv~-~~~-gv~~~~~~- 266 (305)
T 3dr2_A 192 GLAFSP-DEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGW-LWSS-SGT-GVCVFDSD- 266 (305)
T ss_dssp EEEECT-TSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSC-EEEC-CSS-EEEEECTT-
T ss_pred ceEEcC-CCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCC-EEEe-cCC-cEEEECCC-
Confidence 899999 88877666554 68999998754310 011 111234456899999998 4444 344 49999974
Q ss_pred ccceeeeeecccceeEeEEEEeccCCeEEEeecCC
Q 021121 269 EDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDE 303 (317)
Q Consensus 269 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg 303 (317)
++ .+..+..+. .+..++|+++ ++.|..++.++
T Consensus 267 g~-~~~~~~~~~-~~~~~~f~~d-~~~L~it~~~~ 298 (305)
T 3dr2_A 267 GQ-LLGHIPTPG-TASNCTFDQA-QQRLFITGGPC 298 (305)
T ss_dssp SC-EEEEEECSS-CCCEEEECTT-SCEEEEEETTE
T ss_pred CC-EEEEEECCC-ceeEEEEeCC-CCEEEEEcCCe
Confidence 33 444554444 5888999977 66666666554
No 216
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.57 E-value=4e-11 Score=98.97 Aligned_cols=244 Identities=11% Similarity=-0.027 Sum_probs=151.0
Q ss_pred EEEEecCCCCeEEEEEeccccc----ccCceEEEEecCCCCCcceeeeee-----cCCCCeeEEEecCCCCCeEEEEEc-
Q 021121 12 SVKFSPFYESRLAVATAQNFGI----LGNGRVHVLDLSPAAPALTELVAF-----DTADGVYDLAWSESHDSLLIAAVA- 81 (317)
Q Consensus 12 ~~~~~p~~~~~~~~~~~~~~~~----~~~g~i~i~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~l~~~~~- 81 (317)
.++++| +++.+......... ..++.|.+||...... ...+..- ........++|+|+|. +|+++..
T Consensus 70 ~i~~sp--Dg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~-~~~i~~~~~~~~~~g~~p~~~~~spDG~-~l~v~n~~ 145 (373)
T 2mad_H 70 NPVAAH--SGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLP-IADIELPDAPRFDVGPYSWMNANTPNNA-DLLFFQFA 145 (373)
T ss_pred CeEECC--CCCEEEEEeccccccccCCCCCeEEEEECCCCcE-EEEEECCCccccccCCCccceEECCCCC-EEEEEecC
Confidence 899999 45555554321000 0156899999975431 1111110 0112355899999995 6666653
Q ss_pred -CCeEEEEEeCCCCCCCCcee-eccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEee-----ccccc-eE
Q 021121 82 -DGSVKIYDTALPPTANPIRS-LHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFK-----EHAYC-VY 153 (317)
Q Consensus 82 -dg~i~v~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~-----~~~~~-v~ 153 (317)
++.|.++| .+. +.... +.. .. ++.+.|+++..+++.+.||.+.++|. +++...... ....+ ..
T Consensus 146 ~~~~v~viD-~t~---~~~~~~i~~-~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~ 216 (373)
T 2mad_H 146 AGPAVGLVV-QGG---SSDDQLLSS-PT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLT 216 (373)
T ss_pred CCCeEEEEE-CCC---CEEeEEcCC-Cc---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceee
Confidence 57899999 765 44444 332 11 25566777667888889999999999 776663322 11112 13
Q ss_pred EEEEecCCCCeEEEEeCCCeEEEEeCCCCCc--eeeecc----------CccceEEEEecCCCCcEEEEEec--------
Q 021121 154 NATWNPRHSDVFCSASGDCTLRIWDVREMGS--TMIIPA----------HEFEILACDWNKYDDCLIASASV-------- 213 (317)
Q Consensus 154 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~----------~~~~v~~i~~~~~~~~~l~~~~~-------- 213 (317)
...+.++++.++++ +..+.+.+.|+..... ...+.. .......+.++| +++.+.++..
T Consensus 217 ~~~~~~~~~~~~~~-~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~-d~~~lyV~~~~~~~~~~~ 294 (373)
T 2mad_H 217 QPAQANKSGRIVWP-VYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLK-SSDGIYLLTSEQSAWKLH 294 (373)
T ss_pred cceeEecCCEEEEE-cCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECC-CCCEEEEEeccCCccccc
Confidence 34566764444444 4678999999875532 122211 012234478888 6666666442
Q ss_pred --CCcEEEEEccCCCccEEEEecCCCceeEEEecCCCCeeEEeee-cCCeEEEEecccccce
Q 021121 214 --DKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCS-YDMTVCLWDFMVEDAL 272 (317)
Q Consensus 214 --d~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d~~i~vwd~~~~~~~ 272 (317)
.+.|.++|..+.+. +..+.. ......++|+|+++.+++++. .++.|.++|+.+.+..
T Consensus 295 ~~~~~V~VID~~t~~v-v~~i~~-g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv 354 (373)
T 2mad_H 295 AAAKEVTSVTGLVGQT-SSQISL-GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQD 354 (373)
T ss_pred CCCCeEEEEECCCCEE-EEEEEC-CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEE
Confidence 35799999988664 555543 335789999999985566665 5899999999998733
No 217
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.56 E-value=1.8e-11 Score=100.81 Aligned_cols=260 Identities=14% Similarity=0.159 Sum_probs=163.1
Q ss_pred CceEEEEecCCCCCcceeee-ee--cC-CCCeeEEEe-----------c--CCCCCeEEEEEcCCeEEEEEeCCC-CCCC
Q 021121 36 NGRVHVLDLSPAAPALTELV-AF--DT-ADGVYDLAW-----------S--ESHDSLLIAAVADGSVKIYDTALP-PTAN 97 (317)
Q Consensus 36 ~g~i~i~~~~~~~~~~~~~~-~~--~~-~~~v~~~~~-----------~--~~~~~~l~~~~~dg~i~v~~~~~~-~~~~ 97 (317)
.-.|.+.|+++..+...++. .. .. ......+.| + ++.+.+++.+..+++|.++|+.+. ...+
T Consensus 42 ~d~la~vDvdp~s~ty~~vi~~~~~p~~gde~HH~gwn~css~~~~~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~ 121 (462)
T 2ece_A 42 ADFIAVVDVNPKSETYSKIVHKVELPYINDELHHFGWNACSSALCPNGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPK 121 (462)
T ss_dssp CCEEEEEECCTTSTTTTSEEEEEECSSSCCCBCCCEESCCGGGGSTTCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCE
T ss_pred CCeEEEEECCCCCCCcceEEEEEECCCCCCcccccchhhhhhhcccccCCCccCCEEEEccCCCCeEEEEECCCCCCCce
Confidence 34688889887554332222 11 11 113334444 6 777667777888899999998643 2223
Q ss_pred Cceeec------c-CCcceEEEEEecCCCCEEEEEcCC------CEEEEEEcCCCceeEEeecccc---ceEEEEEecCC
Q 021121 98 PIRSLH------E-HTREVHSADYNPTRRDSFITSSWD------DTVKLWTVDRPTSVRTFKEHAY---CVYNATWNPRH 161 (317)
Q Consensus 98 ~~~~~~------~-~~~~v~~~~~~~~~~~~l~~~~~d------g~v~iwd~~~~~~~~~~~~~~~---~v~~~~~~~~~ 161 (317)
....++ . -...-..+...|++ +++++..+ |.|.++|.++.+.+.++..... .-..+.|+|+
T Consensus 122 ~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~- 198 (462)
T 2ece_A 122 IIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLP- 198 (462)
T ss_dssp EEEEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETT-
T ss_pred eeeeechhhcccccCCCcccceeECCCe--EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCC-
Confidence 333331 1 11244567888998 56666555 7899999999999988863322 2456888999
Q ss_pred CCeEEEEe-------------------CCCeEEEEeCCCCCceeeeccC--ccceEEEEe--cCCCCcEEEEEe------
Q 021121 162 SDVFCSAS-------------------GDCTLRIWDVREMGSTMIIPAH--EFEILACDW--NKYDDCLIASAS------ 212 (317)
Q Consensus 162 ~~~l~~~~-------------------~dg~i~i~d~~~~~~~~~~~~~--~~~v~~i~~--~~~~~~~l~~~~------ 212 (317)
.+.+++.. .+.+|.+||+.+++.+.++... ......+.| +| +++++.++.
T Consensus 199 ~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~P-dg~~aYV~~e~~~~~ 277 (462)
T 2ece_A 199 NEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDP-TKLMGFINMVVSLKD 277 (462)
T ss_dssp TTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSST-TCCEEEEEEEEETTT
T ss_pred CCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECC-CCCEEEEEEeeeccC
Confidence 77777764 3689999999988777776642 133455555 99 777766666
Q ss_pred cCCcEEEEEccCCCcc-EEE--EecC----------------CCceeEEEecCCCCeeEEeeecCCeEEEEeccccc--c
Q 021121 213 VDKSIKIWDVRNYRVP-IAV--LNGH----------------GYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVED--A 271 (317)
Q Consensus 213 ~d~~i~v~d~~~~~~~-~~~--~~~~----------------~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~--~ 271 (317)
.+++|.+|....++.. .+. +... ......|.++|+++.+.++.-..+.|.+||+.... .
T Consensus 278 Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~ 357 (462)
T 2ece_A 278 LSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPV 357 (462)
T ss_dssp CCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCE
T ss_pred CCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcE
Confidence 4668887766542210 011 1100 23468899999999655655567899999986432 2
Q ss_pred eeeeeeccc--------------ceeEeEEEEeccCCeEEEee
Q 021121 272 LVGRYDHHT--------------EFAVGVDMSVLVEGLLASTG 300 (317)
Q Consensus 272 ~~~~~~~~~--------------~~v~~~~~~~~~~~~l~s~~ 300 (317)
++....-.. +.-..++++|+ +++|+++.
T Consensus 358 lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpD-Gk~LyVaN 399 (462)
T 2ece_A 358 LTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRD-GRRVYVTN 399 (462)
T ss_dssp EEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTT-SSEEEEEC
T ss_pred EEEEEEeCCeeccccccccccCCCCCCEEEEcCC-CCEEEEEc
Confidence 222222110 13578999999 66666665
No 218
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.55 E-value=6.1e-12 Score=102.83 Aligned_cols=262 Identities=11% Similarity=0.063 Sum_probs=156.2
Q ss_pred EEEEecCCCCeEEEEEecccc--c--ccCceEEEEecCCCCCcceeeeeecC------CCCeeEEEecCCCCCeEEEEEc
Q 021121 12 SVKFSPFYESRLAVATAQNFG--I--LGNGRVHVLDLSPAAPALTELVAFDT------ADGVYDLAWSESHDSLLIAAVA 81 (317)
Q Consensus 12 ~~~~~p~~~~~~~~~~~~~~~--~--~~~g~i~i~~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~l~~~~~ 81 (317)
.+.++|+ ++.+..++.... . ..++.|.+||..+... ...+. ... ......++|+|||. +++++..
T Consensus 82 ~va~spD--G~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v-~~~I~-v~~g~r~~~g~~P~~~a~spDGk-~lyVan~ 156 (386)
T 3sjl_D 82 NPVVADD--GSFIAHASTVFSRIARGERTDYVEVFDPVTLLP-TADIE-LPDAPRFLVGTYPWMTSLTPDGK-TLLFYQF 156 (386)
T ss_dssp EEEECTT--SSCEEEEEEEEEETTEEEEEEEEEEECTTTCCE-EEEEE-ETTCCCCCBSCCGGGEEECTTSS-EEEEEEC
T ss_pred cEEECCC--CCEEEEEcccccccccCCCCCEEEEEECCCCeE-EEEEE-CCCccccccCCCCceEEEcCCCC-EEEEEEc
Confidence 3999995 443333321000 0 0156899999987652 22221 111 12466799999995 6666653
Q ss_pred --CCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCC-CceeEEeecc----ccce-E
Q 021121 82 --DGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDR-PTSVRTFKEH----AYCV-Y 153 (317)
Q Consensus 82 --dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~-~~~~~~~~~~----~~~v-~ 153 (317)
++.|.++|+.+. +.+..+... + +....|.+...+++.+.||.+.+.++.+ ++.......+ ..++ .
T Consensus 157 ~~~~~VsVID~~t~---~vv~tI~v~-g---~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~ 229 (386)
T 3sjl_D 157 SPAPAVGVVDLEGK---AFKRMLDVP-D---CYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLIN 229 (386)
T ss_dssp SSSCEEEEEETTTT---EEEEEEECC-S---EEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCS
T ss_pred CCCCeEEEEECCCC---cEEEEEECC-C---cceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccc
Confidence 689999999876 555555321 1 1223455555778888899999999876 5543221111 1122 1
Q ss_pred EEEEecCCCCeEEEEeCCCeEEEEeCCCCCc--eeeec---------c-CccceEEEEecCCCCcEEEEEec--------
Q 021121 154 NATWNPRHSDVFCSASGDCTLRIWDVREMGS--TMIIP---------A-HEFEILACDWNKYDDCLIASASV-------- 213 (317)
Q Consensus 154 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~---------~-~~~~v~~i~~~~~~~~~l~~~~~-------- 213 (317)
...|.+.++++++ .+.+|.|++.|+.+... ...+. + .......++++| +++.++....
T Consensus 230 ~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~-~~~~lyV~~~~~~~~~hk 307 (386)
T 3sjl_D 230 HPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHR-ALDRIYLLVDQRDEWRHK 307 (386)
T ss_dssp CCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEET-TTTEEEEEEEECCTTCTT
T ss_pred cceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECC-CCCeEEEEeccccccccC
Confidence 2356533255444 56689999999976542 22221 0 012334577788 6666555432
Q ss_pred --CCcEEEEEccCCCccEEEEecCCCceeEEEecCCCCeeEEe-eecCCeEEEEecccccceeeeeecccceeEeEEEEe
Q 021121 214 --DKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLAS-CSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSV 290 (317)
Q Consensus 214 --d~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~-~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~ 290 (317)
.+.|.++|+.+.+. +..+.. ...+.+|+++|+++.+|++ ...++.|.++|..+++ .+..+..- +.-+.|.+++
T Consensus 308 ~~~~~V~viD~~t~kv-~~~i~v-g~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k-~~~~i~~~-~~p~~l~~s~ 383 (386)
T 3sjl_D 308 TASRFVVVLDAKTGER-LAKFEM-GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGE-ELRSVNQL-GHGPQVITTA 383 (386)
T ss_dssp SCEEEEEEEETTTCCE-EEEEEE-EEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCC-EEEEECCC-CSSCCEEEEC
T ss_pred CCCCEEEEEECCCCeE-EEEEEC-CCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCc-EEEEecCC-CCCceeEECC
Confidence 25799999999775 444432 2368899999999744555 4558999999999987 44555432 3345566666
Q ss_pred c
Q 021121 291 L 291 (317)
Q Consensus 291 ~ 291 (317)
|
T Consensus 384 d 384 (386)
T 3sjl_D 384 D 384 (386)
T ss_dssp C
T ss_pred c
Confidence 4
No 219
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.55 E-value=3.3e-12 Score=114.35 Aligned_cols=248 Identities=11% Similarity=0.049 Sum_probs=151.2
Q ss_pred cceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCC----
Q 021121 8 FNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADG---- 83 (317)
Q Consensus 8 ~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg---- 83 (317)
..+..++|||+ ..+++.+.... ......|++||+.++.. ..... .......++|+ |++ .|+.++.+.
T Consensus 129 ~~l~~~~~SpD-g~~lAy~~~~~--G~~~~~i~v~dl~tg~~--~~~~~--~~~k~~~~~Ws-Dg~-~l~y~~~~~~~~~ 199 (693)
T 3iuj_A 129 TALDQLSFSRD-GRILAYSLSLA--GSDWREIHLMDVESKQP--LETPL--KDVKFSGISWL-GNE-GFFYSSYDKPDGS 199 (693)
T ss_dssp CEEEEEEECTT-SSEEEEEEECS--SCCEEEEEEEETTTCSE--EEEEE--EEEESCCCEEE-TTT-EEEEEESSCCC--
T ss_pred EEEEEEEECCC-CCEEEEEEecC--CCceEEEEEEECCCCCC--Ccccc--CCceeccEEEe-CCC-EEEEEEecCcccc
Confidence 35778899994 33444444320 00125799999988762 11111 11113567899 984 666666663
Q ss_pred ---------eEEEEEeCCCCCC-CCceeecc-CCcceEEEEEecCCCCEEEEEcC---CCEEEEEEcCCCc-eeEEeecc
Q 021121 84 ---------SVKIYDTALPPTA-NPIRSLHE-HTREVHSADYNPTRRDSFITSSW---DDTVKLWTVDRPT-SVRTFKEH 148 (317)
Q Consensus 84 ---------~i~v~~~~~~~~~-~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~---dg~v~iwd~~~~~-~~~~~~~~ 148 (317)
.|.+|++.++... ..+..... |......+.|+|+++.++++.+. +..|+++|+.++. ....+..+
T Consensus 200 ~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~ 279 (693)
T 3iuj_A 200 ELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGD 279 (693)
T ss_dssp -----CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECS
T ss_pred cccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCC
Confidence 3888988754211 12222223 44557889999999844444432 3589999998764 44555555
Q ss_pred ccceEEEEEecCCCCeEEEEeCC---CeEEEEeCCCCCc--eeeeccCccceEEEEecCCCCcEEEEEec-CC--cEEEE
Q 021121 149 AYCVYNATWNPRHSDVFCSASGD---CTLRIWDVREMGS--TMIIPAHEFEILACDWNKYDDCLIASASV-DK--SIKIW 220 (317)
Q Consensus 149 ~~~v~~~~~~~~~~~~l~~~~~d---g~i~i~d~~~~~~--~~~~~~~~~~v~~i~~~~~~~~~l~~~~~-d~--~i~v~ 220 (317)
....... ++++++.+++....+ +.|..+|+.++.. ...+..+...+. .|++ +++.|+.... ++ .|++|
T Consensus 280 ~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~-~g~~lv~~~~~~g~~~l~~~ 355 (693)
T 3iuj_A 280 LDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHS-GSGYLFAEYMVDATARVEQF 355 (693)
T ss_dssp SSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEE-ETTEEEEEEEETTEEEEEEE
T ss_pred CCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEE-ECCEEEEEEEECCeeEEEEE
Confidence 5555554 666645555555543 6799999987654 244555555554 7888 6666655544 44 68899
Q ss_pred EccCCCccEEEEe-cCCCceeEEEecCCCCeeEEeeecC---CeEEEEeccccc
Q 021121 221 DVRNYRVPIAVLN-GHGYAVRKVKFSPHRRNLLASCSYD---MTVCLWDFMVED 270 (317)
Q Consensus 221 d~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~d---~~i~vwd~~~~~ 270 (317)
|+.... ...+. .....+..+.++|+++.++++.+.. +.+..||+.+++
T Consensus 356 d~~g~~--~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 356 DYEGKR--VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA 407 (693)
T ss_dssp CTTSCE--EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC
T ss_pred ECCCCe--eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe
Confidence 887532 33332 3445677888888888655544422 789999987765
No 220
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.54 E-value=4.7e-12 Score=113.34 Aligned_cols=243 Identities=13% Similarity=0.073 Sum_probs=150.5
Q ss_pred CCCCeeEEEecCCCCCeEEE-EEcC----CeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCC----
Q 021121 59 TADGVYDLAWSESHDSLLIA-AVAD----GSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDD---- 129 (317)
Q Consensus 59 ~~~~v~~~~~~~~~~~~l~~-~~~d----g~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg---- 129 (317)
+...+..++|||||. +||. .+.. ..|++||+.++ +.+.. ..+......++|+ |++ .|+.++.+.
T Consensus 127 ~~~~l~~~~~SpDg~-~lAy~~~~~G~~~~~i~v~dl~tg---~~~~~-~~~~~k~~~~~Ws-Dg~-~l~y~~~~~~~~~ 199 (693)
T 3iuj_A 127 GTTALDQLSFSRDGR-ILAYSLSLAGSDWREIHLMDVESK---QPLET-PLKDVKFSGISWL-GNE-GFFYSSYDKPDGS 199 (693)
T ss_dssp SCCEEEEEEECTTSS-EEEEEEECSSCCEEEEEEEETTTC---SEEEE-EEEEEESCCCEEE-TTT-EEEEEESSCCC--
T ss_pred CcEEEEEEEECCCCC-EEEEEEecCCCceEEEEEEECCCC---CCCcc-ccCCceeccEEEe-CCC-EEEEEEecCcccc
Confidence 334688899999995 5553 3333 46999999876 32221 1111113567899 988 666666553
Q ss_pred ---------EEEEEEcCCCce--eEEee--c-cccceEEEEEecCCCCeE-EEEeC---CCeEEEEeCCCCC-ceeeecc
Q 021121 130 ---------TVKLWTVDRPTS--VRTFK--E-HAYCVYNATWNPRHSDVF-CSASG---DCTLRIWDVREMG-STMIIPA 190 (317)
Q Consensus 130 ---------~v~iwd~~~~~~--~~~~~--~-~~~~v~~~~~~~~~~~~l-~~~~~---dg~i~i~d~~~~~-~~~~~~~ 190 (317)
.|++|++.+++. ...+. . +......+.|+|+ ++.+ ++.+. ...|+++|+.++. ....+..
T Consensus 200 ~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpD-g~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~ 278 (693)
T 3iuj_A 200 ELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTED-DRFLLISAANSTSGNRLYVKDLSQENAPLLTVQG 278 (693)
T ss_dssp -----CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTT-SCEEEEEEESSSSCCEEEEEETTSTTCCCEEEEC
T ss_pred cccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCC-CCEEEEEEccCCCCcEEEEEECCCCCCceEEEeC
Confidence 499999987653 22232 2 3345788999999 5554 44432 3589999998764 3445554
Q ss_pred CccceEEEEecCCCCcEEEEEecC---CcEEEEEccCCCc-cEEEEecCCCceeEEEecCCCCeeEEeeecCC--eEEEE
Q 021121 191 HEFEILACDWNKYDDCLIASASVD---KSIKIWDVRNYRV-PIAVLNGHGYAVRKVKFSPHRRNLLASCSYDM--TVCLW 264 (317)
Q Consensus 191 ~~~~v~~i~~~~~~~~~l~~~~~d---~~i~v~d~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~--~i~vw 264 (317)
+....... +++..+.+++....+ +.|..+|+.+... ....+..|...+. .|+++++.++++...++ .|++|
T Consensus 279 ~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~ 355 (693)
T 3iuj_A 279 DLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQF 355 (693)
T ss_dssp SSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEE
T ss_pred CCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEE
Confidence 55544444 555245555555443 5799999987542 1345555665554 89999986666666665 58888
Q ss_pred ecccccceeeeeecccceeEeEEEEeccCCeEEEeec---CCcEEEEecCCC
Q 021121 265 DFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGW---DELVYVWQQGMD 313 (317)
Q Consensus 265 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~---dg~i~~w~~~~~ 313 (317)
|+..+. .........+.+..+.++++++.++++.+. -+.++.||+...
T Consensus 356 d~~g~~-~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g 406 (693)
T 3iuj_A 356 DYEGKR-VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSG 406 (693)
T ss_dssp CTTSCE-EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTC
T ss_pred ECCCCe-eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCC
Confidence 887543 222222344567788888884445544432 278999988654
No 221
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.54 E-value=7.9e-13 Score=108.14 Aligned_cols=269 Identities=11% Similarity=-0.027 Sum_probs=163.9
Q ss_pred EEecCCCCeEEEEEecccccccCc----eEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEE---------
Q 021121 14 KFSPFYESRLAVATAQNFGILGNG----RVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAV--------- 80 (317)
Q Consensus 14 ~~~p~~~~~~~~~~~~~~~~~~~g----~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--------- 80 (317)
...|....++.++... ++ +|.++|..+.+ .+..+.....- .+.++|++. .++++.
T Consensus 25 ~~~~~~~~~~yV~~~~------~~~~~d~vsvID~~t~~----v~~~i~vG~~P-~i~~spDg~-~lyVan~~~~r~~~G 92 (368)
T 1mda_H 25 HGPGAISRRSHITLPA------YFAGTTENWVSCAGCGV----TLGHSLGAFLS-LAVAGHSGS-DFALASTSFARSAKG 92 (368)
T ss_dssp CCCCCCTTEEEEEECT------TTCSSEEEEEEETTTTE----EEEEEEECTTC-EEEECTTSS-CEEEEEEEETTTTSS
T ss_pred cCCCCCCCeEEEECCc------cCCccceEEEEECCCCe----EEEEEeCCCCC-ceEECCCCC-EEEEEcccccccccC
Confidence 3443334555555543 33 88899988764 22223222222 799999995 555554
Q ss_pred -cCCeEEEEEeCCCCCCCCceeeccC-------CcceEEEEEecCCCCEEEEEcC--CCEEEE--EEcCCCceeEEeecc
Q 021121 81 -ADGSVKIYDTALPPTANPIRSLHEH-------TREVHSADYNPTRRDSFITSSW--DDTVKL--WTVDRPTSVRTFKEH 148 (317)
Q Consensus 81 -~dg~i~v~~~~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~l~~~~~--dg~v~i--wd~~~~~~~~~~~~~ 148 (317)
.++.|.+||..+. +.+..+... ......+.++|+|+ +++++.. +..|.+ +|+.+ +..+...
T Consensus 93 ~~~~~VsviD~~T~---~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk-~lyVan~~~~~~v~V~~iD~~t---v~~i~v~ 165 (368)
T 1mda_H 93 KRTDYVEVFDPVTF---LPIADIELPDAPRFSVGPRVHIIGNCASSA-CLLFFLFGSSAAAGLSVPGASD---DQLTKSA 165 (368)
T ss_dssp SEEEEEEEECTTTC---CEEEEEEETTSCSCCBSCCTTSEEECTTSS-CEEEEECSSSCEEEEEETTTEE---EEEEECS
T ss_pred CCCCEEEEEECCCC---CEEEEEECCCccccccCCCcceEEEcCCCC-EEEEEccCCCCeEEEEEEchhh---ceEEECC
Confidence 3688999999876 555554322 12355789999999 5665543 467888 99877 4444321
Q ss_pred ccceEEEEEecCCCCeEEEEeCCCeEEEEeCCC-----CCcee----eeccCccceEEEEecCCCCcEEEEEecCCcEEE
Q 021121 149 AYCVYNATWNPRHSDVFCSASGDCTLRIWDVRE-----MGSTM----IIPAHEFEILACDWNKYDDCLIASASVDKSIKI 219 (317)
Q Consensus 149 ~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~-----~~~~~----~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v 219 (317)
+. ....|++...+++.+.||.+.+.|+.+ ++... .+.....+. . .+ ++..++..+. +.+.+
T Consensus 166 -~~---~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~-~~~~~~~vs~-~~V~v 235 (368)
T 1mda_H 166 -SC---FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-AN-YPGMLVWAVA-SSILQ 235 (368)
T ss_dssp -SC---CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---E-ET-TTTEEEECBS-SCCEE
T ss_pred -Cc---eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---c-cc-cCCEEEEEcC-CEEEE
Confidence 11 223455566677778899988888876 32221 111122333 3 55 4445555555 89999
Q ss_pred EEccCCCccE-EEEec-------C---CCceeEEEecCCCCeeEEeee---c-----CCeEEEEecccccceeeeeeccc
Q 021121 220 WDVRNYRVPI-AVLNG-------H---GYAVRKVKFSPHRRNLLASCS---Y-----DMTVCLWDFMVEDALVGRYDHHT 280 (317)
Q Consensus 220 ~d~~~~~~~~-~~~~~-------~---~~~v~~~~~~~~~~~~l~~~~---~-----d~~i~vwd~~~~~~~~~~~~~~~ 280 (317)
.|.......+ ..+.- + ......++++|++++++++.. . ++.+.++|+.+.+ .+..+....
T Consensus 236 iD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~-vv~~i~vg~ 314 (368)
T 1mda_H 236 GDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQ-TSGPISNGH 314 (368)
T ss_dssp EECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCC-EEECCEEEE
T ss_pred EECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCe-EEEEEECCC
Confidence 9986533211 11110 1 111223789999996555433 1 2356699999987 445554333
Q ss_pred ceeEeEEEEeccCCeEEEee-cCCcEEEEecCCC
Q 021121 281 EFAVGVDMSVLVEGLLASTG-WDELVYVWQQGMD 313 (317)
Q Consensus 281 ~~v~~~~~~~~~~~~l~s~~-~dg~i~~w~~~~~ 313 (317)
...+|+|+|++..++++.. .++.|.++|+.+.
T Consensus 315 -~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~ 347 (368)
T 1mda_H 315 -DSDAIIAAQDGASDNYANSAGTEVLDIYDAASD 347 (368)
T ss_dssp -EECEEEECCSSSCEEEEEETTTTEEEEEESSSC
T ss_pred -CcceEEECCCCCEEEEEccCCCCeEEEEECCCC
Confidence 5889999999444777777 5999999999774
No 222
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.49 E-value=6.1e-10 Score=87.69 Aligned_cols=247 Identities=11% Similarity=0.078 Sum_probs=151.7
Q ss_pred CceEEEEecCCCCCcc---eeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEE
Q 021121 36 NGRVHVLDLSPAAPAL---TELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSA 112 (317)
Q Consensus 36 ~g~i~i~~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~ 112 (317)
.+.|+.++++...... ..+.. .....+..++|++++..++++-..++.|..++.... ...............+
T Consensus 9 ~~~I~~~~~~g~~~~~~~~~~~~~-~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~---~~~~~~~~~~~~p~~i 84 (267)
T 1npe_A 9 TGKIERLPLERNTMKKTEAKAFLH-IPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGG---EPTTIIRQDLGSPEGI 84 (267)
T ss_dssp EEEEEEEEESSSCBCGGGCEEEEE-EEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSC---CCEEEECTTCCCEEEE
T ss_pred CCeEEEEEecCcccccccceeeec-CCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCC---CcEEEEECCCCCccEE
Confidence 3488999987654211 11111 112357899999976556666666789999998643 2222222223567899
Q ss_pred EEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeeccccceEEEEEecCCCCeEEEEeC--CCeEEEEeCCCCCceeeecc
Q 021121 113 DYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASG--DCTLRIWDVREMGSTMIIPA 190 (317)
Q Consensus 113 ~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~ 190 (317)
++.+++..++++-...+.|.+++++.................++++|+++.++++... .+.|..+++...........
T Consensus 85 a~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~ 164 (267)
T 1npe_A 85 ALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQD 164 (267)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECT
T ss_pred EEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEEC
Confidence 9999766466666677899999987543322222222467899999974555555433 46888888764332222222
Q ss_pred CccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEeccccc
Q 021121 191 HEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVED 270 (317)
Q Consensus 191 ~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~ 270 (317)
.-.....++++|..+.++++-...+.|.++|...... ...... ......++.. +.+++++....+.|..+|..+++
T Consensus 165 ~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~-~~~~~~-~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g~ 240 (267)
T 1npe_A 165 NLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGR-RKVLEG-LQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISK 240 (267)
T ss_dssp TCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEE-EEEEEC-CCSEEEEEEE--TTEEEEEETTTTEEEEEETTTTE
T ss_pred CCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCce-EEEecC-CCCceEEEEe--CCEEEEEECCCCeEEEEeCCCCC
Confidence 2345788999993345556666678999999875332 222332 2234567664 44456655567899999988776
Q ss_pred ceeeeeeccc-ceeEeEEEEec
Q 021121 271 ALVGRYDHHT-EFAVGVDMSVL 291 (317)
Q Consensus 271 ~~~~~~~~~~-~~v~~~~~~~~ 291 (317)
....+.... ....++++.|+
T Consensus 241 -~~~~i~~g~~~~p~gi~~~~~ 261 (267)
T 1npe_A 241 -EMDTFHPHKQTRLYGITIALS 261 (267)
T ss_dssp -EEEEECCSSCCCCCCEEEECS
T ss_pred -ceEEEccccccccceeeecCc
Confidence 334443322 24678888886
No 223
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.48 E-value=5.3e-11 Score=95.72 Aligned_cols=224 Identities=10% Similarity=0.024 Sum_probs=140.4
Q ss_pred ceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeEEEE
Q 021121 9 NGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIY 88 (317)
Q Consensus 9 ~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~ 88 (317)
......|+|+ .+.++.+... ++.|..|+.. .. ..... .....+..+++.++| +++++...++.|.+|
T Consensus 46 ~~egp~~~~~-g~~l~~~d~~------~~~i~~~~~~-g~--~~~~~--~~~~~~~gl~~d~dG-~l~v~~~~~~~v~~~ 112 (305)
T 3dr2_A 46 WSEGPAWWEA-QRTLVWSDLV------GRRVLGWRED-GT--VDVLL--DATAFTNGNAVDAQQ-RLVHCEHGRRAITRS 112 (305)
T ss_dssp SEEEEEEEGG-GTEEEEEETT------TTEEEEEETT-SC--EEEEE--ESCSCEEEEEECTTS-CEEEEETTTTEEEEE
T ss_pred CccCCeEeCC-CCEEEEEECC------CCEEEEEeCC-CC--EEEEe--CCCCccceeeECCCC-CEEEEECCCCEEEEE
Confidence 4567899994 2335555543 7899999873 22 22222 355678999999998 465555455789999
Q ss_pred EeCCCCCCCCce-eecc-CCcceEEEEEecCCCCEEEE----EcC-------------CCEEEEEEcCCCceeEEeeccc
Q 021121 89 DTALPPTANPIR-SLHE-HTREVHSADYNPTRRDSFIT----SSW-------------DDTVKLWTVDRPTSVRTFKEHA 149 (317)
Q Consensus 89 ~~~~~~~~~~~~-~~~~-~~~~v~~~~~~~~~~~~l~~----~~~-------------dg~v~iwd~~~~~~~~~~~~~~ 149 (317)
+.+ + ....+. .... ....+..+++.++|. ++++ |.. .+.|..+|..+++..... ..
T Consensus 113 ~~~-g-~~~~~~~~~~~~~~~~~~~i~~d~dG~-l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~ 187 (305)
T 3dr2_A 113 DAD-G-QAHLLVGRYAGKRLNSPNDLIVARDGA-IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DL 187 (305)
T ss_dssp CTT-S-CEEEEECEETTEECSCCCCEEECTTSC-EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EE
T ss_pred CCC-C-CEEEEEeccCCCccCCCCCEEECCCCC-EEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cC
Confidence 864 2 111111 1111 123467899999997 6665 332 357888888766654433 34
Q ss_pred cceEEEEEecCCCCeEEEEeCC------CeEEEEeCCCCCcee---ee-ccCccceEEEEecCCCCcEEEEEecCCcEEE
Q 021121 150 YCVYNATWNPRHSDVFCSASGD------CTLRIWDVREMGSTM---II-PAHEFEILACDWNKYDDCLIASASVDKSIKI 219 (317)
Q Consensus 150 ~~v~~~~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~---~~-~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v 219 (317)
.....++|+|+ ++.++.+... +.|.+||+.... +. .+ .........+++++ ++++.++ ..+ .|.+
T Consensus 188 ~~p~gl~~spd-g~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~~d~-~G~lwv~-~~~-gv~~ 262 (305)
T 3dr2_A 188 DHPNGLAFSPD-EQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFCVDR-GGWLWSS-SGT-GVCV 262 (305)
T ss_dssp SSEEEEEECTT-SSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEEECT-TSCEEEC-CSS-EEEE
T ss_pred CCCcceEEcCC-CCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEEECC-CCCEEEe-cCC-cEEE
Confidence 55788999999 6666565554 789999987543 21 11 11223345788898 8885554 444 4999
Q ss_pred EEccCCCccEEEEecCCCceeEEEecCCCCeeEEeeecCC
Q 021121 220 WDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDM 259 (317)
Q Consensus 220 ~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~ 259 (317)
||... + .+..+..+. .+.+++|+|+++. |+.++.++
T Consensus 263 ~~~~g-~-~~~~~~~~~-~~~~~~f~~d~~~-L~it~~~~ 298 (305)
T 3dr2_A 263 FDSDG-Q-LLGHIPTPG-TASNCTFDQAQQR-LFITGGPC 298 (305)
T ss_dssp ECTTS-C-EEEEEECSS-CCCEEEECTTSCE-EEEEETTE
T ss_pred ECCCC-C-EEEEEECCC-ceeEEEEeCCCCE-EEEEcCCe
Confidence 99843 3 355555444 5889999998885 55555554
No 224
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.43 E-value=1.4e-11 Score=100.74 Aligned_cols=242 Identities=10% Similarity=0.041 Sum_probs=148.8
Q ss_pred cceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeee-----eecCCCCeeEEEecCCCCCeEEEEEc-
Q 021121 8 FNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELV-----AFDTADGVYDLAWSESHDSLLIAAVA- 81 (317)
Q Consensus 8 ~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~~l~~~~~- 81 (317)
..+..++++| +++++++.... .++.++||.+.. . .+.... ...+-..+..+++.+++ +++++-..
T Consensus 17 ~~p~~va~~~--~g~~~v~~~~~----~~~~~~l~~~~~-g-~~~~~p~~~~~~~~~~~~p~gv~~d~~g-~L~v~D~g~ 87 (343)
T 2qe8_A 17 LAPGNITLTP--DGRLFLSLHQF----YQPEMQVAELTQ-D-GLIPFPPQSGNAIITFDTVLGIKSDGNG-IVWMLDNGN 87 (343)
T ss_dssp SCEEEEEECT--TSCEEEEECGG----GCCSCSEEEEET-T-EEEESCCCCSSCCCCCSCEEEEEECSSS-EEEEEECHH
T ss_pred CCcceEEECC--CCCEEEEeCCC----CCCceEEEEECC-C-CeecCCCcccCcccceeEeeEEEEcCCC-cEEEEcCCC
Confidence 4678999999 67777775321 033355665542 2 122111 01234578999999987 45555433
Q ss_pred ----CCeEEEEEeCCCCCCCCceeec------cCCcceEEEEEecCCCCEEEEEc---CCCEEEEEEcCCCceeEEeecc
Q 021121 82 ----DGSVKIYDTALPPTANPIRSLH------EHTREVHSADYNPTRRDSFITSS---WDDTVKLWTVDRPTSVRTFKEH 148 (317)
Q Consensus 82 ----dg~i~v~~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~l~~~~---~dg~v~iwd~~~~~~~~~~~~~ 148 (317)
++.|.+||+.++ +.+..+. .+......+++++++...+++.. .++.|.+||+.+++..+.+..|
T Consensus 88 ~~~~~~~i~~~d~~tg---~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~ 164 (343)
T 2qe8_A 88 QSKSVPKLVAWDTLNN---QLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGY 164 (343)
T ss_dssp HHTSCCEEEEEETTTT---EEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTC
T ss_pred CcCCCCeEEEEECCCC---eEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCC
Confidence 578999998765 3333322 12345688999987553555555 6789999999887765554321
Q ss_pred -----------------------------ccceEEEEEecCCCCeEEEEeCCC-eEEEEeCC---CCCc-----ee--ee
Q 021121 149 -----------------------------AYCVYNATWNPRHSDVFCSASGDC-TLRIWDVR---EMGS-----TM--II 188 (317)
Q Consensus 149 -----------------------------~~~v~~~~~~~~~~~~l~~~~~dg-~i~i~d~~---~~~~-----~~--~~ 188 (317)
...+..++|+|+ ++.|+.+...+ .+..++.. .+.. .. ..
T Consensus 165 ~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~d-g~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 243 (343)
T 2qe8_A 165 PGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAE-NEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIER 243 (343)
T ss_dssp TTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTT-SCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEE
T ss_pred CcccccccceeECCEEEEeccCCCceeceecccceeEeccC-CCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEe
Confidence 023688999998 67666666555 56555532 1110 00 11
Q ss_pred ccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEe-cCCCceeEEEecCCCCeeEEeeecCCeEEEEe
Q 021121 189 PAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLN-GHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265 (317)
Q Consensus 189 ~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd 265 (317)
.++......+++++ +++++++...++.|.+||..+++. ..... .+...+.+++|.+++. ++++.+..+.+.+|.
T Consensus 244 ~g~~g~pdgia~d~-~G~l~va~~~~~~V~~~d~~~G~~-~~~~~~~~~~~p~~va~~~~g~-l~v~~~~~~~~~~f~ 318 (343)
T 2qe8_A 244 YSEKPICDGISIDK-DHNIYVGDLAHSAIGVITSADRAY-KLLVTDEKLSWTDSFNFGSDGY-LYFDCNQLHHSAPLN 318 (343)
T ss_dssp EEECCSCSCEEECT-TCCEEEEEGGGTEEEEEETTTTEE-EEEEECGGGSCEEEEEECTTSC-EEEEECCGGGSGGGB
T ss_pred cccCCCCceEEECC-CCCEEEEccCCCeEEEEECCCCCE-EEEEECCceecCCeeEECCCCc-EEEEeCccccccccc
Confidence 12233456799999 899999988899999999844432 22222 2245688999999887 666665444444343
No 225
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.43 E-value=2.3e-10 Score=101.76 Aligned_cols=195 Identities=10% Similarity=0.017 Sum_probs=130.2
Q ss_pred EEEEecCCCCEEEEEcCCC-------------------EEEEEEcCCCceeEEeeccc---------cceEEEEEecCCC
Q 021121 111 SADYNPTRRDSFITSSWDD-------------------TVKLWTVDRPTSVRTFKEHA---------YCVYNATWNPRHS 162 (317)
Q Consensus 111 ~~~~~~~~~~~l~~~~~dg-------------------~v~iwd~~~~~~~~~~~~~~---------~~v~~~~~~~~~~ 162 (317)
.++++|++. .++.+..++ .|..+|.++++.+..++... ....-+....+ +
T Consensus 247 ~~~~d~~~~-~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~d-G 324 (677)
T 1kb0_A 247 SMTFDAELN-TMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIA-G 324 (677)
T ss_dssp CEEEETTTT-EEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEET-T
T ss_pred ceeEcCCCC-EEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccC-C
Confidence 567888877 777777664 59999999999888776321 12223333334 4
Q ss_pred ---CeEEEEeCCCeEEEEeCCCCCceeeeccCc-----------cce------------------------EEEEecCCC
Q 021121 163 ---DVFCSASGDCTLRIWDVREMGSTMIIPAHE-----------FEI------------------------LACDWNKYD 204 (317)
Q Consensus 163 ---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-----------~~v------------------------~~i~~~~~~ 204 (317)
..++.++.+|.++++|.++++.+..+.... .++ ..++++| +
T Consensus 325 ~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp-~ 403 (677)
T 1kb0_A 325 KPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNP-Q 403 (677)
T ss_dssp EEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEET-T
T ss_pred cEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcC-C
Confidence 678899999999999999998876554211 011 1467888 6
Q ss_pred CcEEEEEec-------------------------------------------CCcEEEEEccCCCccEEEEecCCCceeE
Q 021121 205 DCLIASASV-------------------------------------------DKSIKIWDVRNYRVPIAVLNGHGYAVRK 241 (317)
Q Consensus 205 ~~~l~~~~~-------------------------------------------d~~i~v~d~~~~~~~~~~~~~~~~~v~~ 241 (317)
..++++... .+.|..||+.+++. +.... +..++..
T Consensus 404 ~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~-~W~~~-~~~~~~~ 481 (677)
T 1kb0_A 404 TGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKA-AWSVE-HVSPWNG 481 (677)
T ss_dssp TTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEE-EEEEE-ESSSCCC
T ss_pred CCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcE-EeecC-CCCCCcC
Confidence 666666432 27899999998774 44443 3334555
Q ss_pred EEecCCCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEeec----------------CCcE
Q 021121 242 VKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGW----------------DELV 305 (317)
Q Consensus 242 ~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~----------------dg~i 305 (317)
..+...+. +++.++.||.+++||.++++.+.....++.....-+.+.+++..+++..+. .+.+
T Consensus 482 g~~~~~g~-~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v~~~~G~~~~~~~~~~~~~~~~~~~l 560 (677)
T 1kb0_A 482 GTLTTAGN-VVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYVSVAVGWGGVYGLAARATERQGPGTV 560 (677)
T ss_dssp CEEEETTT-EEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEECCCHHHHHHCCSCSCCCCCEE
T ss_pred cceEeCCC-EEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEEEEeccCCccccccccccccCCCCeE
Confidence 55666776 677889999999999999985443333443334456677774445554322 4678
Q ss_pred EEEecC
Q 021121 306 YVWQQG 311 (317)
Q Consensus 306 ~~w~~~ 311 (317)
..|.+.
T Consensus 561 ~~f~l~ 566 (677)
T 1kb0_A 561 YTFVVG 566 (677)
T ss_dssp EEEEET
T ss_pred EEEecc
Confidence 888886
No 226
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.43 E-value=6.4e-11 Score=98.52 Aligned_cols=249 Identities=13% Similarity=0.040 Sum_probs=150.8
Q ss_pred EEEEecCCCCeEEEEEec-ccc--cccCceEEEEecCCCCCcceeeeeec------CCCCeeEEEecCCCCCeEEEEEc-
Q 021121 12 SVKFSPFYESRLAVATAQ-NFG--ILGNGRVHVLDLSPAAPALTELVAFD------TADGVYDLAWSESHDSLLIAAVA- 81 (317)
Q Consensus 12 ~~~~~p~~~~~~~~~~~~-~~~--~~~~g~i~i~~~~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~l~~~~~- 81 (317)
.+.++|++ ..+.++... ... ...++.|.++|..+... ...+. .. .......+.|+||+. +++++..
T Consensus 122 gia~SpDg-k~lyVan~~~~~~~~G~~~~~VsviD~~t~~v-v~~I~-v~g~~r~~~g~~P~~~~~spDGk-~lyV~n~~ 197 (426)
T 3c75_H 122 HPVAAEDG-SFFAQASTVFERIARGKRTDYVEVFDPVTFLP-IADIE-LPDAPRFLVGTYQWMNALTPDNK-NLLFYQFS 197 (426)
T ss_dssp EEEECTTS-SCEEEEEEEEEETTEEEEEEEEEEECTTTCCE-EEEEE-ETTCCCCCBSCCGGGSEECTTSS-EEEEEECS
T ss_pred ceEECCCC-CEEEEEeccccccccCCCCCEEEEEECCCCcE-EEEEE-CCCccccccCCCcceEEEcCCCC-EEEEEecC
Confidence 79999953 333333310 000 00156899999987652 22222 11 123456799999994 6666653
Q ss_pred -CCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEE----eeccccce-EEE
Q 021121 82 -DGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRT----FKEHAYCV-YNA 155 (317)
Q Consensus 82 -dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~----~~~~~~~v-~~~ 155 (317)
++.|.+.|+.+. +.+..+..-. +....|++...+++.+.||.+.+.+..+++.... +.....++ ..+
T Consensus 198 ~~~~VsVID~~t~---kvv~~I~v~g----~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~ 270 (426)
T 3c75_H 198 PAPAVGVVDLEGK---TFDRMLDVPD----CYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHP 270 (426)
T ss_dssp SSCEEEEEETTTT---EEEEEEECCS----EEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCC
T ss_pred CCCeEEEEECCCC---eEEEEEEcCC----ceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEe
Confidence 578999999876 4444444211 1344555555777788889988888865554422 11111111 235
Q ss_pred EEecCCCCeEEEEeCCCeEEEEeCCCCCcee--eecc----------CccceEEEEecCCCCcEEEEEec----------
Q 021121 156 TWNPRHSDVFCSASGDCTLRIWDVREMGSTM--IIPA----------HEFEILACDWNKYDDCLIASASV---------- 213 (317)
Q Consensus 156 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~--~~~~----------~~~~v~~i~~~~~~~~~l~~~~~---------- 213 (317)
.+.++ +..++..+..+.+.+.|+....... .+.. .......++++| +++.+++...
T Consensus 271 ~~~~d-g~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~-dg~rlyVa~~~~~~gthk~~ 348 (426)
T 3c75_H 271 AFSLR-SGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHR-QSDRIYLLVDQRDEWKHKAA 348 (426)
T ss_dssp EECTT-TCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEG-GGTEEEEEEEECCTTCTTSC
T ss_pred eecCC-CCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcC-CCCEEEEEecccccccccCC
Confidence 67888 5555556678999999986543211 1110 011122368898 6655555432
Q ss_pred CCcEEEEEccCCCccEEEEecCCCceeEEEecCCCCeeEEeee-cCCeEEEEecccccceeeee
Q 021121 214 DKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCS-YDMTVCLWDFMVEDALVGRY 276 (317)
Q Consensus 214 d~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d~~i~vwd~~~~~~~~~~~ 276 (317)
++.|.++|..+.+. +..+... .....++|+|+++.++++.. .++.|.++|+.+.+ .+..+
T Consensus 349 s~~VsVID~~T~kv-v~~I~vg-~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~k-vv~tI 409 (426)
T 3c75_H 349 SRFVVVLNAETGER-INKIELG-HEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGE-ELRSV 409 (426)
T ss_dssp EEEEEEEETTTCCE-EEEEEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEETTTCC-EEEEE
T ss_pred CCEEEEEECCCCeE-EEEEECC-CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCC-EEEEe
Confidence 35799999999774 5555432 25789999999983455555 69999999999987 44454
No 227
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.42 E-value=1.8e-10 Score=102.71 Aligned_cols=252 Identities=13% Similarity=0.068 Sum_probs=151.9
Q ss_pred CceEEEEecCCCCCcceeeeeecCCCCeeEEEecC---CCCCeEEEEE------cCCeEEEEEeCCCCCCCCceeecc--
Q 021121 36 NGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSE---SHDSLLIAAV------ADGSVKIYDTALPPTANPIRSLHE-- 104 (317)
Q Consensus 36 ~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~l~~~~------~dg~i~v~~~~~~~~~~~~~~~~~-- 104 (317)
+|.|+.+|..+++......... .......+..+| ++ .++++. .+|.|..||..++ +.+..+..
T Consensus 130 dg~l~AlDa~TG~~~W~~~~~~-~~~~~~~~~~sP~v~~g--~v~vg~~~~~~~~~g~v~a~D~~tG---~~~W~~~~~~ 203 (689)
T 1yiq_A 130 DGRLEAIDAKTGQRAWSVDTRA-DHKRSYTITGAPRVVNG--KVVIGNGGAEFGVRGYVTAYDAETG---KEAWRFYTVP 203 (689)
T ss_dssp TSEEEEEETTTCCEEEEEECCS-CTTSCCBCCSCCEEETT--EEEECCBCTTTCCBCEEEEEETTTC---CEEEEEESSC
T ss_pred CCEEEEEECCCCCEeeeecCcC-CCCCCccccCCcEEECC--EEEEEeCCCccCCCCEEEEEECCCC---cEEEEecccC
Confidence 8899999998776322211100 111111111222 33 444443 2688999998877 33322211
Q ss_pred -----------------------------CCcceEEEEEecCCCCEEEEEcCCCE-------------------EEEEEc
Q 021121 105 -----------------------------HTREVHSADYNPTRRDSFITSSWDDT-------------------VKLWTV 136 (317)
Q Consensus 105 -----------------------------~~~~v~~~~~~~~~~~~l~~~~~dg~-------------------v~iwd~ 136 (317)
+......+++.|+.. +++.+..++. |..+|.
T Consensus 204 ~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~-~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~ 282 (689)
T 1yiq_A 204 GDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELN-LLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNA 282 (689)
T ss_dssp CCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTT-EEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEET
T ss_pred CCcccccccccccccccccCCceeeecCCCCccccceeEcCCCC-EEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEc
Confidence 001112577888876 8888887764 999999
Q ss_pred CCCceeEEeeccc---------cceEEEEEecCCCC---eEEEEeCCCeEEEEeCCCCCceeeeccCc------------
Q 021121 137 DRPTSVRTFKEHA---------YCVYNATWNPRHSD---VFCSASGDCTLRIWDVREMGSTMIIPAHE------------ 192 (317)
Q Consensus 137 ~~~~~~~~~~~~~---------~~v~~~~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~~------------ 192 (317)
++++.+..++... .++.......+ +. .++.++.+|.++++|.++++.+.......
T Consensus 283 ~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~-G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~ 361 (689)
T 1yiq_A 283 DTGEYVWHYQTTPGDAWDYTATQHMILAELPID-GKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTG 361 (689)
T ss_dssp TTCCEEEEEESSTTCCSCCCCCSCEEEEEEEET-TEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTT
T ss_pred cCCceeEeeecCCcccccccCCCCcEEEeeccC-CcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCC
Confidence 9999988776421 12222222223 43 78889999999999999998764322110
Q ss_pred ----------------c-----------ceEEEEecCCCCcEEEEEec--------------------------------
Q 021121 193 ----------------F-----------EILACDWNKYDDCLIASASV-------------------------------- 213 (317)
Q Consensus 193 ----------------~-----------~v~~i~~~~~~~~~l~~~~~-------------------------------- 213 (317)
. .-..++++| +..++++...
T Consensus 362 ~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp-~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p 440 (689)
T 1yiq_A 362 RPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNP-DTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMP 440 (689)
T ss_dssp EEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEET-TTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCC
T ss_pred CcccchhhccccCCCCeeEeCCCcccccCCCcceECC-CCCEEEEeccccceeeeeccccccccccccccccCccccccC
Confidence 0 011367888 5556665422
Q ss_pred -------------CCcEEEEEccCCCccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeeccc
Q 021121 214 -------------DKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHT 280 (317)
Q Consensus 214 -------------d~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~ 280 (317)
+|.|+.||+.+++. +.....+. ++..-.+...+. +++.++.||.++.||.++++.+.....++.
T Consensus 441 ~~~~~~~~~~~~~~g~l~A~D~~tG~~-~W~~~~~~-~~~~g~~~tagg-lvf~gt~dg~l~a~D~~tG~~lw~~~~~~~ 517 (689)
T 1yiq_A 441 EGAEGLLEMAKSWSGKLIAWDPVKQQA-AWEVPYVT-IFNGGTLSTAGN-LVFEGSADGRVIAYAADTGEKLWEQPAASG 517 (689)
T ss_dssp SSHHHHHHHHTTCEEEEEEEETTTTEE-EEEEEESS-SCCCCEEEETTT-EEEEECTTSEEEEEETTTCCEEEEEECSSC
T ss_pred cccccCCCCCCCcceeEEEEECCCCCe-EeEccCCC-CccCccceECCC-EEEEECCCCcEEEEECCCCccceeeeCCCC
Confidence 37799999999874 44444333 334445555666 788899999999999999985443333333
Q ss_pred ceeEeEEEEeccCCeEEEe
Q 021121 281 EFAVGVDMSVLVEGLLAST 299 (317)
Q Consensus 281 ~~v~~~~~~~~~~~~l~s~ 299 (317)
....-+.|..++..++++.
T Consensus 518 ~~~~p~ty~~~G~qyv~~~ 536 (689)
T 1yiq_A 518 VMAAPVTYSVDGEQYVTFM 536 (689)
T ss_dssp CCSCCEEEEETTEEEEEEE
T ss_pred cccCceEEEECCEEEEEEE
Confidence 3334577778855566544
No 228
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.41 E-value=2.1e-10 Score=102.24 Aligned_cols=228 Identities=10% Similarity=0.090 Sum_probs=145.5
Q ss_pred CeEEEEEcCCeEEEEEeCCCCCCCCceeeccC--C---cceEE-EEEecCCCCEEEEEc------CCCEEEEEEcCCCce
Q 021121 74 SLLIAAVADGSVKIYDTALPPTANPIRSLHEH--T---REVHS-ADYNPTRRDSFITSS------WDDTVKLWTVDRPTS 141 (317)
Q Consensus 74 ~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~--~---~~v~~-~~~~~~~~~~l~~~~------~dg~v~iwd~~~~~~ 141 (317)
..+++++.|+.|..+|.+++ +.+..+... . ..+.+ ..+. ++ .++.++ .+|.|..||.++++.
T Consensus 122 g~v~v~~~dg~l~AlDa~TG---~~~W~~~~~~~~~~~~~~~~sP~v~-~g--~v~vg~~~~~~~~~g~v~a~D~~tG~~ 195 (689)
T 1yiq_A 122 GKVYVGVLDGRLEAIDAKTG---QRAWSVDTRADHKRSYTITGAPRVV-NG--KVVIGNGGAEFGVRGYVTAYDAETGKE 195 (689)
T ss_dssp TEEEEECTTSEEEEEETTTC---CEEEEEECCSCTTSCCBCCSCCEEE-TT--EEEECCBCTTTCCBCEEEEEETTTCCE
T ss_pred CEEEEEccCCEEEEEECCCC---CEeeeecCcCCCCCCccccCCcEEE-CC--EEEEEeCCCccCCCCEEEEEECCCCcE
Confidence 47888889999999999877 444333221 1 11110 0111 33 455554 378999999999998
Q ss_pred eEEeeccc-------------------------------cceEEEEEecCCCCeEEEEeCCCe-----------------
Q 021121 142 VRTFKEHA-------------------------------YCVYNATWNPRHSDVFCSASGDCT----------------- 173 (317)
Q Consensus 142 ~~~~~~~~-------------------------------~~v~~~~~~~~~~~~l~~~~~dg~----------------- 173 (317)
+..+.... .....+++.|+ ..+++.++.++.
T Consensus 196 ~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~-~~~vy~~~~~g~~w~~~~~~~~~gd~~y~ 274 (689)
T 1yiq_A 196 AWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPE-LNLLYIGVGNGSLWDPKWRSQAKGDNLFL 274 (689)
T ss_dssp EEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETT-TTEEEEECCCEESSCHHHHHTTCSCCTTT
T ss_pred EEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCC-CCEEEEeCCCCCccccCCCCCCCCCceee
Confidence 87765210 00125778887 678888887764
Q ss_pred --EEEEeCCCCCceeeecc--Cc-------cceEEEEecCCCCc---EEEEEecCCcEEEEEccCCCccEEEEe-cCC--
Q 021121 174 --LRIWDVREMGSTMIIPA--HE-------FEILACDWNKYDDC---LIASASVDKSIKIWDVRNYRVPIAVLN-GHG-- 236 (317)
Q Consensus 174 --i~i~d~~~~~~~~~~~~--~~-------~~v~~i~~~~~~~~---~l~~~~~d~~i~v~d~~~~~~~~~~~~-~~~-- 236 (317)
|..+|.++++.+..++. |. .+........ +++ .++.++.+|.++++|.++++. +.... ...
T Consensus 275 ~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~-~G~~~~~v~~~~~~G~l~~lD~~tG~~-l~~~~~~~~~w 352 (689)
T 1yiq_A 275 SSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPI-DGKPRKVLMQAPKNGFFYVIDRATGEL-LSAKGIVPQSW 352 (689)
T ss_dssp TEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEE-TTEEEEEEEECCTTSEEEEEETTTCCE-EEEEESSCCSS
T ss_pred eeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeecc-CCcEEEEEEEECCCCeEEEEECCCCCE-ecccccccccc
Confidence 99999999998877653 21 1111112222 343 788899999999999998874 32111 000
Q ss_pred ------------------------------------CceeEEEecCCCCeeEEeeec-----------------------
Q 021121 237 ------------------------------------YAVRKVKFSPHRRNLLASCSY----------------------- 257 (317)
Q Consensus 237 ------------------------------------~~v~~~~~~~~~~~~l~~~~~----------------------- 257 (317)
..-..++++|+.. ++++...
T Consensus 353 ~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~-~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (689)
T 1yiq_A 353 TKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTG-LVYIPAHIMSAYYEHIPEAPKRNPFKSMYQ 431 (689)
T ss_dssp EEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTT-EEEEEEEECCEEEECCSSCCCCCSCTTSCC
T ss_pred ccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCC-EEEEeccccceeeeeccccccccccccccc
Confidence 0012378888877 4554422
Q ss_pred ----------------------CCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEeecCCcEEEEecCCCC
Q 021121 258 ----------------------DMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGMDP 314 (317)
Q Consensus 258 ----------------------d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~ 314 (317)
+|.|..||+.+++.. -....+ .++..-.+... +.+++.++.||.++.||..+.+
T Consensus 432 ~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~-W~~~~~-~~~~~g~~~ta-gglvf~gt~dg~l~a~D~~tG~ 507 (689)
T 1yiq_A 432 LGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAA-WEVPYV-TIFNGGTLSTA-GNLVFEGSADGRVIAYAADTGE 507 (689)
T ss_dssp CSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEE-EEEEES-SSCCCCEEEET-TTEEEEECTTSEEEEEETTTCC
T ss_pred cCccccccCcccccCCCCCCCcceeEEEEECCCCCeE-eEccCC-CCccCccceEC-CCEEEEECCCCcEEEEECCCCc
Confidence 378999999998743 333333 33444466666 6789999999999999998764
No 229
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.40 E-value=1.1e-09 Score=90.76 Aligned_cols=248 Identities=10% Similarity=-0.004 Sum_probs=149.1
Q ss_pred CceEEEEecCCCCCcceeeeeecCCCCeeE-EEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcce-----
Q 021121 36 NGRVHVLDLSPAAPALTELVAFDTADGVYD-LAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREV----- 109 (317)
Q Consensus 36 ~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v----- 109 (317)
++.|..+|..+++.... ......+.. .... + ..+++++.++.|..+|..++ +.+..........
T Consensus 112 ~g~l~a~d~~tG~~~W~----~~~~~~~~~~p~~~-~--~~v~v~~~~g~l~~~d~~tG---~~~W~~~~~~~~~~~~~~ 181 (376)
T 3q7m_A 112 KAQVYALNTSDGTVAWQ----TKVAGEALSRPVVS-D--GLVLIHTSNGQLQALNEADG---AVKWTVNLDMPSLSLRGE 181 (376)
T ss_dssp TSEEEEEETTTCCEEEE----EECSSCCCSCCEEE-T--TEEEEECTTSEEEEEETTTC---CEEEEEECCC-----CCC
T ss_pred CCEEEEEECCCCCEEEE----EeCCCceEcCCEEE-C--CEEEEEcCCCeEEEEECCCC---cEEEEEeCCCCceeecCC
Confidence 78999999887653211 111212211 1122 2 37888888999999998766 4443333211110
Q ss_pred EEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeeccccc----eEE---EEEec--CCCCeEEEEeCCCeEEEEeCC
Q 021121 110 HSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYC----VYN---ATWNP--RHSDVFCSASGDCTLRIWDVR 180 (317)
Q Consensus 110 ~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~----v~~---~~~~~--~~~~~l~~~~~dg~i~i~d~~ 180 (317)
...... +. .++.+..++.+..+|..+++.+......... +.. +.-.| . +..++.++.++.+..+|.+
T Consensus 182 ~~~~~~--~~-~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~v~~~~~~g~l~~~d~~ 257 (376)
T 3q7m_A 182 SAPTTA--FG-AAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVV-NGVVFALAYNGNLTALDLR 257 (376)
T ss_dssp CCCEEE--TT-EEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEE-TTEEEEECTTSCEEEEETT
T ss_pred CCcEEE--CC-EEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEE-CCEEEEEecCcEEEEEECC
Confidence 111222 23 6888888999999999999887766532110 000 00011 1 4567778889999999999
Q ss_pred CCCceeeeccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEe-cCCCceeEEEecCCCCeeEEeeecCC
Q 021121 181 EMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLN-GHGYAVRKVKFSPHRRNLLASCSYDM 259 (317)
Q Consensus 181 ~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~d~ 259 (317)
+++.+..... .....+.. .+..+..++.++.+..+|..+++. +.... .....+...... +. .|+.++.+|
T Consensus 258 tG~~~w~~~~--~~~~~~~~---~~~~l~~~~~~g~l~~~d~~tG~~-~w~~~~~~~~~~~~~~~~--~~-~l~v~~~~g 328 (376)
T 3q7m_A 258 SGQIMWKREL--GSVNDFIV---DGNRIYLVDQNDRVMALTIDGGVT-LWTQSDLLHRLLTSPVLY--NG-NLVVGDSEG 328 (376)
T ss_dssp TCCEEEEECC--CCEEEEEE---ETTEEEEEETTCCEEEEETTTCCE-EEEECTTTTSCCCCCEEE--TT-EEEEECTTS
T ss_pred CCcEEeeccC--CCCCCceE---ECCEEEEEcCCCeEEEEECCCCcE-EEeecccCCCcccCCEEE--CC-EEEEEeCCC
Confidence 9987766542 22334443 345677777899999999998774 43433 222223333332 33 477788899
Q ss_pred eEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEeecCCcEEEEe
Q 021121 260 TVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQ 309 (317)
Q Consensus 260 ~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~ 309 (317)
.+.++|..+++ .+.........+....... +..|+.++.+|.|+.|+
T Consensus 329 ~l~~~d~~tG~-~~~~~~~~~~~~~~~~~~~--~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 329 YLHWINVEDGR-FVAQQKVDSSGFQTEPVAA--DGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp EEEEEETTTCC-EEEEEECCTTCBCSCCEEE--TTEEEEEBTTSCEEEEE
T ss_pred eEEEEECCCCc-EEEEEecCCCcceeCCEEE--CCEEEEEeCCCEEEEEe
Confidence 99999999887 3344443233333222222 56788888999999987
No 230
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.39 E-value=6.6e-09 Score=81.72 Aligned_cols=233 Identities=6% Similarity=-0.031 Sum_probs=143.6
Q ss_pred eEEEEEcCCeEEEEEeCCCCCCCC--ceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeeccccce
Q 021121 75 LLIAAVADGSVKIYDTALPPTANP--IRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCV 152 (317)
Q Consensus 75 ~l~~~~~dg~i~v~~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v 152 (317)
+|+.+.. +.|+.++++....... ...+......+..++|++++..++++-..++.|..+++................
T Consensus 3 ~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p 81 (267)
T 1npe_A 3 HLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSP 81 (267)
T ss_dssp EEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCE
T ss_pred EEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCc
Confidence 4444443 4788888875421110 111222234578999999766466666678899999998665433333233568
Q ss_pred EEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEec--CCcEEEEEccCCCccEE
Q 021121 153 YNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASV--DKSIKIWDVRNYRVPIA 230 (317)
Q Consensus 153 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~--d~~i~v~d~~~~~~~~~ 230 (317)
..+++.|+++.++++....+.|.++++..................++++|..+.++++... .+.|..+++..... ..
T Consensus 82 ~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~-~~ 160 (267)
T 1npe_A 82 EGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR-RI 160 (267)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC-EE
T ss_pred cEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCc-EE
Confidence 9999999756666666678899999987543322222222456899999933444444433 46888888765332 22
Q ss_pred EEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEeecCCcEEEEec
Q 021121 231 VLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQ 310 (317)
Q Consensus 231 ~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~ 310 (317)
...........++++|++..++++-...+.|.++|..... ....... .....+++. +++.++++....+.|..++.
T Consensus 161 ~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~-~~~~~~~-~~~P~gi~~--d~~~lyva~~~~~~v~~~d~ 236 (267)
T 1npe_A 161 LAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPG-RRKVLEG-LQYPFAVTS--YGKNLYYTDWKTNSVIAMDL 236 (267)
T ss_dssp EECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEE-EEEEEEC-CCSEEEEEE--ETTEEEEEETTTTEEEEEET
T ss_pred EEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCc-eEEEecC-CCCceEEEE--eCCEEEEEECCCCeEEEEeC
Confidence 2222334578999999887666666677899999987643 2222222 222355654 33455555556788988887
Q ss_pred CCC
Q 021121 311 GMD 313 (317)
Q Consensus 311 ~~~ 313 (317)
...
T Consensus 237 ~~g 239 (267)
T 1npe_A 237 AIS 239 (267)
T ss_dssp TTT
T ss_pred CCC
Confidence 643
No 231
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.39 E-value=8.9e-11 Score=95.36 Aligned_cols=220 Identities=10% Similarity=-0.014 Sum_probs=145.4
Q ss_pred CeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeeccccceE
Q 021121 74 SLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVY 153 (317)
Q Consensus 74 ~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~ 153 (317)
..+..++.++.+..+|.. + +...........+.++...+++. +..++.++.|..+|.+ ++....+......+.
T Consensus 108 ~~l~v~t~~~~l~~~d~~-g---~~~~~~~~~~~~~~~~~~~~~g~--l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~ 180 (330)
T 3hxj_A 108 DILYVTSMDGHLYAINTD-G---TEKWRFKTKKAIYATPIVSEDGT--IYVGSNDNYLYAINPD-GTEKWRFKTNDAITS 180 (330)
T ss_dssp TEEEEECTTSEEEEECTT-S---CEEEEEECSSCCCSCCEECTTSC--EEEECTTSEEEEECTT-SCEEEEEECSSCCCS
T ss_pred CEEEEEecCCEEEEEcCC-C---CEEEEEcCCCceeeeeEEcCCCE--EEEEcCCCEEEEECCC-CCEeEEEecCCCcee
Confidence 367788888989999876 3 33434444444556666666664 6777888999999998 777766665555667
Q ss_pred EEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEe
Q 021121 154 NATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLN 233 (317)
Q Consensus 154 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~ 233 (317)
++...++ +.+. .++ +.|..+| .+++...........+.++...+ ++. +..++.++.+..+|. +++. +....
T Consensus 181 ~~~~d~~-g~l~-v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~-~g~-l~v~t~~~gl~~~~~-~g~~-~~~~~ 251 (330)
T 3hxj_A 181 AASIGKD-GTIY-FGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISE-DGT-IYVTSLDGHLYAINP-DGTE-KWRFK 251 (330)
T ss_dssp CCEECTT-CCEE-EES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECT-TSC-EEEEETTTEEEEECT-TSCE-EEEEE
T ss_pred eeEEcCC-CEEE-EEe--CEEEEEC-CCCcEEEEEccCCcceeceEECC-CCe-EEEEcCCCeEEEECC-CCCE-eEEee
Confidence 7777665 5544 444 7899999 67776666665556677888877 654 455666788888874 3332 44444
Q ss_pred cCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEeecCCcEEEEecCCC
Q 021121 234 GHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGMD 313 (317)
Q Consensus 234 ~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~ 313 (317)
.....+..+...+++. |..++.+|.|..+|. +++ ....+......+.++...++ ..|..++.+|.+++......
T Consensus 252 ~~~~~~~~~~~~~~g~--l~v~t~~ggl~~~d~-~g~-~~~~~~~~~~~~~~~~~d~~--g~l~~gt~~G~~~~~~~~~~ 325 (330)
T 3hxj_A 252 TGKRIESSPVIGNTDT--IYFGSYDGHLYAINP-DGT-EKWNFETGSWIIATPVIDEN--GTIYFGTRNGKFYALFNLEH 325 (330)
T ss_dssp CSSCCCSCCEECTTSC--EEEECTTCEEEEECT-TSC-EEEEEECSSCCCSCCEECTT--CCEEEECTTSCEEEEEC---
T ss_pred CCCCccccceEcCCCe--EEEecCCCCEEEECC-CCc-EEEEEEcCCccccceEEcCC--CEEEEEcCCCeEEEEecccc
Confidence 4444455666766664 667778888999995 444 33444444455666666554 46777889999999888765
Q ss_pred CC
Q 021121 314 PR 315 (317)
Q Consensus 314 ~~ 315 (317)
++
T Consensus 326 ~~ 327 (330)
T 3hxj_A 326 HH 327 (330)
T ss_dssp --
T ss_pred cc
Confidence 44
No 232
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.39 E-value=3.8e-09 Score=87.50 Aligned_cols=258 Identities=7% Similarity=-0.077 Sum_probs=152.6
Q ss_pred CceEEEEecCCCCCcceeeeeecC------CCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcce
Q 021121 36 NGRVHVLDLSPAAPALTELVAFDT------ADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREV 109 (317)
Q Consensus 36 ~g~i~i~~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v 109 (317)
++.|..+|..+++........... ...+.+.-.. ++ ..+++++.++.|..+|.+++ +.+..........
T Consensus 62 ~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~v~v~~~~g~l~a~d~~tG---~~~W~~~~~~~~~ 136 (376)
T 3q7m_A 62 AGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTV-SG-GHVYIGSEKAQVYALNTSDG---TVAWQTKVAGEAL 136 (376)
T ss_dssp TSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEE-ET-TEEEEEETTSEEEEEETTTC---CEEEEEECSSCCC
T ss_pred CCeEEEEEccCCceeeeecCccccccccccCcccccCceE-eC-CEEEEEcCCCEEEEEECCCC---CEEEEEeCCCceE
Confidence 789999998776532211110000 2223222112 23 37888889999999998876 4443333222111
Q ss_pred EEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeeccccce-----EEEEEecCCCCeEEEEeCCCeEEEEeCCCCCc
Q 021121 110 HSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCV-----YNATWNPRHSDVFCSASGDCTLRIWDVREMGS 184 (317)
Q Consensus 110 ~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v-----~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 184 (317)
...... + . .++.++.++.|..+|.++++.+.......... ...... +..++.++.++.+..+|.++++.
T Consensus 137 ~~p~~~-~-~-~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~---~~~v~~g~~~g~l~~~d~~tG~~ 210 (376)
T 3q7m_A 137 SRPVVS-D-G-LVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA---FGAAVVGGDNGRVSAVLMEQGQM 210 (376)
T ss_dssp SCCEEE-T-T-EEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE---TTEEEECCTTTEEEEEETTTCCE
T ss_pred cCCEEE-C-C-EEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE---CCEEEEEcCCCEEEEEECCCCcE
Confidence 111222 2 3 68888889999999999998887765432211 112222 34677888899999999999988
Q ss_pred eeeeccCccc----eE---EEEecC-CCCcEEEEEecCCcEEEEEccCCCccEEEEecCCCceeEEEecCCCCeeEEeee
Q 021121 185 TMIIPAHEFE----IL---ACDWNK-YDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCS 256 (317)
Q Consensus 185 ~~~~~~~~~~----v~---~i~~~~-~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 256 (317)
+......... +. .+...| ..+..++.++.++.+..+|.++++. +..... .....+... +. .++.++
T Consensus 211 ~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~-~w~~~~--~~~~~~~~~--~~-~l~~~~ 284 (376)
T 3q7m_A 211 IWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQI-MWKREL--GSVNDFIVD--GN-RIYLVD 284 (376)
T ss_dssp EEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCE-EEEECC--CCEEEEEEE--TT-EEEEEE
T ss_pred EEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcE-EeeccC--CCCCCceEE--CC-EEEEEc
Confidence 7665422110 00 011111 0235677777899999999998774 333332 233444443 44 477777
Q ss_pred cCCeEEEEecccccceeeeee-cccceeEeEEEEeccCCeEEEeecCCcEEEEecCCCC
Q 021121 257 YDMTVCLWDFMVEDALVGRYD-HHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGMDP 314 (317)
Q Consensus 257 ~d~~i~vwd~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~ 314 (317)
.++.+..+|..+++... ... .....+...... +..|+.++.+|.|.++|..+..
T Consensus 285 ~~g~l~~~d~~tG~~~w-~~~~~~~~~~~~~~~~---~~~l~v~~~~g~l~~~d~~tG~ 339 (376)
T 3q7m_A 285 QNDRVMALTIDGGVTLW-TQSDLLHRLLTSPVLY---NGNLVVGDSEGYLHWINVEDGR 339 (376)
T ss_dssp TTCCEEEEETTTCCEEE-EECTTTTSCCCCCEEE---TTEEEEECTTSEEEEEETTTCC
T ss_pred CCCeEEEEECCCCcEEE-eecccCCCcccCCEEE---CCEEEEEeCCCeEEEEECCCCc
Confidence 89999999999887433 332 222223333333 5678888889999999987643
No 233
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.38 E-value=5.3e-10 Score=99.46 Aligned_cols=229 Identities=11% Similarity=0.079 Sum_probs=149.2
Q ss_pred CeEEEEEcCCeEEEEEeCCCCCCCCceeeccC-C----cceEEEEEecCCCCEEEEEcC------CCEEEEEEcCCCcee
Q 021121 74 SLLIAAVADGSVKIYDTALPPTANPIRSLHEH-T----REVHSADYNPTRRDSFITSSW------DDTVKLWTVDRPTSV 142 (317)
Q Consensus 74 ~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~-~----~~v~~~~~~~~~~~~l~~~~~------dg~v~iwd~~~~~~~ 142 (317)
..+++++.|+.|..+|..++ +.+..+..+ . ..+.+--...+ . .++.++. +|.|+.+|.++++.+
T Consensus 129 ~~v~v~~~dg~l~alD~~tG---~~~W~~~~~~~~~~~~~~~~~p~v~~-~-~v~v~~~~~~~~~~g~v~a~D~~tG~~~ 203 (677)
T 1kb0_A 129 GKVYVGAWDGRLIALDAATG---KEVWHQNTFEGQKGSLTITGAPRVFK-G-KVIIGNGGAEYGVRGYITAYDAETGERK 203 (677)
T ss_dssp TEEEEECTTSEEEEEETTTC---CEEEEEETTTTCCSSCBCCSCCEEET-T-EEEECCBCTTTCCBCEEEEEETTTCCEE
T ss_pred CEEEEEcCCCEEEEEECCCC---CEEeeecCCcCcCcCcccccCcEEEC-C-EEEEEecccccCCCCEEEEEECCCCcEE
Confidence 47888889999999999877 444444332 1 11111001112 3 5555553 799999999999988
Q ss_pred EEeeccccc--------------------------------eEEEEEecCCCCeEEEEeCCC------------------
Q 021121 143 RTFKEHAYC--------------------------------VYNATWNPRHSDVFCSASGDC------------------ 172 (317)
Q Consensus 143 ~~~~~~~~~--------------------------------v~~~~~~~~~~~~l~~~~~dg------------------ 172 (317)
..+...... ...++++|+ ..+++.++.++
T Consensus 204 W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~-~~~vy~~~~~~~~w~~~~~~~~~gd~~~~ 282 (677)
T 1kb0_A 204 WRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAE-LNTMYVGTGNGSPWSHKVRSPKGGDNLYL 282 (677)
T ss_dssp EEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETT-TTEEEEECCCEESSCHHHHSTTCCCCTTT
T ss_pred EEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCC-CCEEEEECCCCccccCCCCCccCCCCeee
Confidence 777532111 135678888 67777776664
Q ss_pred -eEEEEeCCCCCceeeecc--Cc-------cceEEEEecCCCC---cEEEEEecCCcEEEEEccCCCccEEEEecC----
Q 021121 173 -TLRIWDVREMGSTMIIPA--HE-------FEILACDWNKYDD---CLIASASVDKSIKIWDVRNYRVPIAVLNGH---- 235 (317)
Q Consensus 173 -~i~i~d~~~~~~~~~~~~--~~-------~~v~~i~~~~~~~---~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~---- 235 (317)
.|..+|.++++.+..++. |. ....-+.... ++ ..++.++.+|.++++|.++++. +......
T Consensus 283 ~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~-dG~~~~~l~~~~~~G~l~~lD~~tG~~-l~~~~~~~~~~ 360 (677)
T 1kb0_A 283 ASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKI-AGKPRKVILHAPKNGFFFVLDRTNGKF-ISAKNFVPVNW 360 (677)
T ss_dssp TEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEE-TTEEEEEEEECCTTSEEEEEETTTCCE-EEEEESSCCSS
T ss_pred EEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEeccc-CCcEeeEEEEECCCCEEEEEECCCCCE-eccccccccCc
Confidence 599999999998877653 21 1122223323 55 6889999999999999998875 3333211
Q ss_pred -------CCce------------------------eEEEecCCCCeeEEeeec---------------------------
Q 021121 236 -------GYAV------------------------RKVKFSPHRRNLLASCSY--------------------------- 257 (317)
Q Consensus 236 -------~~~v------------------------~~~~~~~~~~~~l~~~~~--------------------------- 257 (317)
..++ ..++++|++. ++++...
T Consensus 361 ~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~-~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 439 (677)
T 1kb0_A 361 ASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTG-LVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTG 439 (677)
T ss_dssp EEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTT-EEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGT
T ss_pred ccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCC-EEEEeChhcceeeecccccccccccccccccccc
Confidence 0111 2578899887 4555432
Q ss_pred ----------------CCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEeecCCcEEEEecCCCC
Q 021121 258 ----------------DMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGMDP 314 (317)
Q Consensus 258 ----------------d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~ 314 (317)
.|.|..||+.+++..- ... +..++.+..+... +.+++.++.||.+++||..+.+
T Consensus 440 ~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W-~~~-~~~~~~~g~~~~~-g~~v~~g~~dg~l~a~D~~tG~ 509 (677)
T 1kb0_A 440 WNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAW-SVE-HVSPWNGGTLTTA-GNVVFQGTADGRLVAYHAATGE 509 (677)
T ss_dssp CCCCEEECSSCCCSCCEEEEEEEETTTTEEEE-EEE-ESSSCCCCEEEET-TTEEEEECTTSEEEEEETTTCC
T ss_pred cccccccccccCCCCCccEEEEEeCCCCcEEe-ecC-CCCCCcCcceEeC-CCEEEEECCCCcEEEEECCCCc
Confidence 2789999999987433 332 3344556667776 6788888999999999998754
No 234
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.36 E-value=5e-13 Score=110.40 Aligned_cols=181 Identities=11% Similarity=0.029 Sum_probs=101.4
Q ss_pred CeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeecccc-ce
Q 021121 74 SLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAY-CV 152 (317)
Q Consensus 74 ~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~-~v 152 (317)
..+++++.||.|..||..++ +.+..+.. +.+.+..+..++. .+++++.||.|+.||.++++.+..+..+.. .+
T Consensus 10 ~~v~~gs~dg~v~a~d~~tG---~~~W~~~~--~~~~s~p~~~~g~-~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~ 83 (369)
T 2hz6_A 10 TLLFVSTLDGSLHAVSKRTG---SIKWTLKE--DPVLQVPTHVEEP-AFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELV 83 (369)
T ss_dssp TEEEEEETTSEEEEEETTTC---CEEEEEEC--CCSCCCC-----C-CEEECTTTCCEEEC-----CCSEECSCCHHHHH
T ss_pred CEEEEEcCCCEEEEEECCCC---CEEEEecC--CCceecceEcCCC-EEEEeCCCCEEEEEECCCCceeeeeeccCcccc
Confidence 48899999999999999877 55555544 4454445556665 677788999999999999988776653321 11
Q ss_pred EE-EEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEE
Q 021121 153 YN-ATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAV 231 (317)
Q Consensus 153 ~~-~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 231 (317)
.+ ..+. . +..+++++.++.++.||.++++.+..+..+. ...++| ++..+++++.++.|+.||.++++. +..
T Consensus 84 ~~sp~~~-~-~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p-~~~~v~~~~~dg~v~a~d~~tG~~-~W~ 155 (369)
T 2hz6_A 84 QASPCRS-S-DGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSP-STSLLYLGRTEYTITMYDTKTREL-RWN 155 (369)
T ss_dssp TTCSCC-------CCCCEEEEEEEEECCC---------------------------EEEEEEEEEEECCCSSSSSC-CCE
T ss_pred ccCceEe-c-CCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccc-cCCEEEEEecCCEEEEEECCCCCE-EEe
Confidence 00 0111 2 4467788889999999999998877766443 234567 778888889999999999998775 333
Q ss_pred EecCCCceeEEEecCCC---CeeEEeeecCCeEEEEecccccc
Q 021121 232 LNGHGYAVRKVKFSPHR---RNLLASCSYDMTVCLWDFMVEDA 271 (317)
Q Consensus 232 ~~~~~~~v~~~~~~~~~---~~~l~~~~~d~~i~vwd~~~~~~ 271 (317)
+..+. .....+.++. . .+++++.||.+..||..+++.
T Consensus 156 ~~~~~--~~~~~~~~~~~~~~-~v~~~~~dg~v~a~d~~tG~~ 195 (369)
T 2hz6_A 156 ATYFD--YAASLPEDDVDYKM-SHFVSNGDGLVVTVDSESGDV 195 (369)
T ss_dssp EEEEE--ECCBCCCCCTTCCC-CEEEEETSCEEEEECTTTCCE
T ss_pred Eeccc--ccCccccCCccccc-eEEEECCCCEEEEEECCCCcE
Confidence 22111 1233344432 3 467788899999999998874
No 235
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.35 E-value=6.7e-13 Score=109.63 Aligned_cols=180 Identities=13% Similarity=0.025 Sum_probs=102.6
Q ss_pred EEEEEcCCCEEEEEEcCCCceeEEeeccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeeccCccc-eE-EE
Q 021121 121 SFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFE-IL-AC 198 (317)
Q Consensus 121 ~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-v~-~i 198 (317)
.+++++.||.|+.||..+++.+.++.. +.+.+..+.++ +.++++++.||.|+.||.++++.+..+..+... +. +.
T Consensus 11 ~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~-g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp 87 (369)
T 2hz6_A 11 LLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVE-EPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASP 87 (369)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC------CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCS
T ss_pred EEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcC-CCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCc
Confidence 799999999999999999999888875 44555555555 667778889999999999988876665433211 11 11
Q ss_pred EecCCCCcEEEEEecCCcEEEEEccCCCccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeec
Q 021121 199 DWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDH 278 (317)
Q Consensus 199 ~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~ 278 (317)
... .+..+++++.++.++.||.++++. +..+..+. ...++|++. .+++++.|+.|+.||.++++.+. .+..
T Consensus 88 ~~~--~~~~v~~g~~dg~v~a~D~~tG~~-~w~~~~~~----~~~~~p~~~-~v~~~~~dg~v~a~d~~tG~~~W-~~~~ 158 (369)
T 2hz6_A 88 CRS--SDGILYMGKKQDIWYVIDLLTGEK-QQTLSSAF----ADSLSPSTS-LLYLGRTEYTITMYDTKTRELRW-NATY 158 (369)
T ss_dssp CC-------CCCCEEEEEEEEECCC----------------------------EEEEEEEEEEECCCSSSSSCCC-EEEE
T ss_pred eEe--cCCEEEEEeCCCEEEEEECCCCcE-EEEecCCC----cccccccCC-EEEEEecCCEEEEEECCCCCEEE-eEec
Confidence 111 345677888899999999998875 44444332 234566666 68888999999999999887432 2222
Q ss_pred ccceeEeEEEEecc--CCeEEEeecCCcEEEEecCCCC
Q 021121 279 HTEFAVGVDMSVLV--EGLLASTGWDELVYVWQQGMDP 314 (317)
Q Consensus 279 ~~~~v~~~~~~~~~--~~~l~s~~~dg~i~~w~~~~~~ 314 (317)
+. .....+.++. +..++.++.||.|+.||..+..
T Consensus 159 ~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~ 194 (369)
T 2hz6_A 159 FD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGD 194 (369)
T ss_dssp EE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCC
T ss_pred cc--ccCccccCCccccceEEEECCCCEEEEEECCCCc
Confidence 11 2233333321 1567778889999999987653
No 236
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.34 E-value=1.4e-09 Score=84.39 Aligned_cols=206 Identities=6% Similarity=-0.003 Sum_probs=140.4
Q ss_pred eeeeecCCC--CeeEEEecCCCCCeEEEEEc--CCeEEEEEeCCCCCCCCceeecc-CCcceEEEEEecCCCCEEEEEcC
Q 021121 53 ELVAFDTAD--GVYDLAWSESHDSLLIAAVA--DGSVKIYDTALPPTANPIRSLHE-HTREVHSADYNPTRRDSFITSSW 127 (317)
Q Consensus 53 ~~~~~~~~~--~v~~~~~~~~~~~~l~~~~~--dg~i~v~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~ 127 (317)
.+..+.|.. ....++|++++ .+.++.+. ++.|+++|+.++ +.+..+.- .......+++. +..+.++.-.
T Consensus 11 vv~~~p~~~~~f~~Gl~~~~dg-~Lyvstg~~~~s~v~~iD~~tg---~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~ 84 (266)
T 2iwa_A 11 VLNEFPHDPYAFTQGLVYAEND-TLFESTGLYGRSSVRQVALQTG---KVENIHKMDDSYFGEGLTLL--NEKLYQVVWL 84 (266)
T ss_dssp EEEEEECCTTCCEEEEEECSTT-EEEEEECSTTTCEEEEEETTTC---CEEEEEECCTTCCEEEEEEE--TTEEEEEETT
T ss_pred EEEEEECCCCCCcccEEEeCCC-eEEEECCCCCCCEEEEEECCCC---CEEEEEecCCCcceEEEEEe--CCEEEEEEec
Confidence 344445554 35789999985 34444433 579999999876 44444331 11222345555 4436666677
Q ss_pred CCEEEEEEcCCCceeEEeeccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeeccCc--c---ceEEEEecC
Q 021121 128 DDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHE--F---EILACDWNK 202 (317)
Q Consensus 128 dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~--~---~v~~i~~~~ 202 (317)
++.+.++|..+.+.+.++...... ...++++ +..++++..++.|.++|..+.+.+..+.... . .++.+.|.
T Consensus 85 ~~~v~viD~~t~~v~~~i~~g~~~--g~glt~D-g~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~- 160 (266)
T 2iwa_A 85 KNIGFIYDRRTLSNIKNFTHQMKD--GWGLATD-GKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI- 160 (266)
T ss_dssp CSEEEEEETTTTEEEEEEECCSSS--CCEEEEC-SSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-
T ss_pred CCEEEEEECCCCcEEEEEECCCCC--eEEEEEC-CCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-
Confidence 899999999999988888643122 2335566 4444455578899999999988877766322 1 35677877
Q ss_pred CCCcEEEEEecCCcEEEEEccCCCccEEEEecC-------------CCceeEEEecCCCCeeEEeeecCCeEEEEecccc
Q 021121 203 YDDCLIASASVDKSIKIWDVRNYRVPIAVLNGH-------------GYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVE 269 (317)
Q Consensus 203 ~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~-------------~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~ 269 (317)
++.+++....++.|.+.|..+++. +..+... ......++|+|+++.+++++...+.+.+.++...
T Consensus 161 -dg~lyvn~~~~~~V~vID~~tg~V-~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 161 -NGEVWANIWQTDCIARISAKDGTL-LGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp -TTEEEEEETTSSEEEEEETTTCCE-EEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred -CCEEEEecCCCCeEEEEECCCCcE-EEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 566666666788999999999774 5554421 1356899999999988899989999998888764
Q ss_pred c
Q 021121 270 D 270 (317)
Q Consensus 270 ~ 270 (317)
.
T Consensus 239 ~ 239 (266)
T 2iwa_A 239 R 239 (266)
T ss_dssp C
T ss_pred c
Confidence 3
No 237
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.33 E-value=9.9e-10 Score=90.65 Aligned_cols=223 Identities=12% Similarity=0.175 Sum_probs=138.5
Q ss_pred CCeEEEEEecccccccCceEEEEecCCCCCcceeeeeec--------CCCCeeEEEecCCCCCeEEEEEcC------CeE
Q 021121 20 ESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFD--------TADGVYDLAWSESHDSLLIAAVAD------GSV 85 (317)
Q Consensus 20 ~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~--------~~~~v~~~~~~~~~~~~l~~~~~d------g~i 85 (317)
+.+.+...+.. +++|+++|+.+.....+.....+ ....-..+...|++ +++++..+ |.|
T Consensus 94 ~r~~l~v~~l~-----s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~~g~~~g~v 166 (462)
T 2ece_A 94 ERRFLIVPGLR-----SSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGNEEGEGPGGI 166 (462)
T ss_dssp CSCEEEEEBTT-----TCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEETTSCSCCEE
T ss_pred cCCEEEEccCC-----CCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe--EEEEcCCCcCCCCCCeE
Confidence 55666665543 89999999975433233333221 11134557778987 56565555 789
Q ss_pred EEEEeCCCCCCCCceeeccC---CcceEEEEEecCCCCEEEEEc-------------------CCCEEEEEEcCCCceeE
Q 021121 86 KIYDTALPPTANPIRSLHEH---TREVHSADYNPTRRDSFITSS-------------------WDDTVKLWTVDRPTSVR 143 (317)
Q Consensus 86 ~v~~~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~l~~~~-------------------~dg~v~iwd~~~~~~~~ 143 (317)
.++|.++. +.+...... ..--..+.|+|+++ .+++.. ...+|.+||+.+++.+.
T Consensus 167 ~vlD~~T~---~v~~~~~~~~~~~~~~Yd~~~~p~~~-~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~ 242 (462)
T 2ece_A 167 LMLDHYSF---EPLGKWEIDRGDQYLAYDFWWNLPNE-VLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIH 242 (462)
T ss_dssp EEECTTTC---CEEEECCSBCTTCCCCCCEEEETTTT-EEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEE
T ss_pred EEEECCCC---eEEEEEccCCCCccccceEEECCCCC-EEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEee
Confidence 99998765 555554421 12244688899988 777774 36899999999988777
Q ss_pred Eeecc--ccceEEEEE--ecCCCCeEEEEe------CCCeEEEEeCCCCCc--eee--eccC----------------cc
Q 021121 144 TFKEH--AYCVYNATW--NPRHSDVFCSAS------GDCTLRIWDVREMGS--TMI--IPAH----------------EF 193 (317)
Q Consensus 144 ~~~~~--~~~v~~~~~--~~~~~~~l~~~~------~dg~i~i~d~~~~~~--~~~--~~~~----------------~~ 193 (317)
++... ......+.| +|+ ++++++++ .+++|.+|....++. ... +... ..
T Consensus 243 tI~vg~~g~~P~~i~f~~~Pd-g~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~ 321 (462)
T 2ece_A 243 SLTLGEENRMALELRPLHDPT-KLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPP 321 (462)
T ss_dssp EEESCTTEEEEEEEEECSSTT-CCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECC
T ss_pred EEecCCCCCccceeEeeECCC-CCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCC
Confidence 77642 234566666 998 55555544 677887766554311 111 1100 13
Q ss_pred ceEEEEecCCCCcEEEEEec-CCcEEEEEccCCCc--cEEEEecCC--------------CceeEEEecCCCCeeEEee
Q 021121 194 EILACDWNKYDDCLIASASV-DKSIKIWDVRNYRV--PIAVLNGHG--------------YAVRKVKFSPHRRNLLASC 255 (317)
Q Consensus 194 ~v~~i~~~~~~~~~l~~~~~-d~~i~v~d~~~~~~--~~~~~~~~~--------------~~v~~~~~~~~~~~~l~~~ 255 (317)
....|.++| ++++|.++.. .+.|.+||+..... .+..+.... ..-..++++|+|++++++.
T Consensus 322 ~pa~I~lS~-DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 322 LVTDIDISL-DDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CCCCEEECT-TSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred ceeEEEECC-CCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 467899999 7777766654 67899999864322 122232210 1357899999999644443
No 238
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.33 E-value=5.3e-08 Score=79.62 Aligned_cols=225 Identities=8% Similarity=-0.009 Sum_probs=143.4
Q ss_pred CceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEe
Q 021121 36 NGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYN 115 (317)
Q Consensus 36 ~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 115 (317)
...|+..++.... ...+ ......+..++|.+.++.++++-...+.|..+++... ...............+++.
T Consensus 52 ~~~I~~i~~~g~~--~~~~--~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~---~~~~~~~~~~~~p~glavd 124 (349)
T 3v64_C 52 RIDIRQVLPHRSE--YTLL--LNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGS---NVEEVVSTGLESPGGLAVD 124 (349)
T ss_dssp BSCEEEECTTSCC--EEEE--ECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---SCEEEECSSCSCCCEEEEE
T ss_pred ccceEEEeCCCCe--eEEe--ecCCCceEEEEEeccccEEEEEeccCCceEEEecCCC---CceEEEeCCCCCccEEEEe
Confidence 3467777776543 2222 2344568899999876555556566788998887654 2222222223445788898
Q ss_pred cCCCCEEEEEcCCCEEEEEEcCCCceeEEeeccccceEEEEEecCCCCeEEEEeCC-CeEEEEeCCCCCceeeeccCccc
Q 021121 116 PTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGD-CTLRIWDVREMGSTMIIPAHEFE 194 (317)
Q Consensus 116 ~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-g~i~i~d~~~~~~~~~~~~~~~~ 194 (317)
+.+..++++-...+.|.+.+++.......+...-.....+++.|.++.++++-... +.|..+++............-..
T Consensus 125 ~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~ 204 (349)
T 3v64_C 125 WVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFW 204 (349)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSC
T ss_pred cCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCC
Confidence 76664666767788999999876543333333345689999999756666666555 88999998754333222223345
Q ss_pred eEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEeccccc
Q 021121 195 ILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVED 270 (317)
Q Consensus 195 v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~ 270 (317)
.+.++++|..+.++++-...+.|..+|+..... .............+++. .+ .++++-...+.|..++..+++
T Consensus 205 PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~-~~~~~~~~~~P~giav~-~~-~ly~td~~~~~V~~~~~~~G~ 277 (349)
T 3v64_C 205 PNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR-KAVISQGLPHPFAITVF-ED-SLYWTDWHTKSINSANKFTGK 277 (349)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSSCSSEEEEEEE-TT-EEEEEETTTTEEEEEETTTCC
T ss_pred cceEEEeCCCCEEEEEECCCCEEEEEeCCCCce-EEEEeCCCCCceEEEEE-CC-EEEEecCCCCeEEEEEccCCC
Confidence 689999985666666666678899999875432 33333333455778883 33 366666677888888855554
No 239
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.31 E-value=6.8e-10 Score=86.08 Aligned_cols=196 Identities=9% Similarity=0.029 Sum_probs=135.1
Q ss_pred ceEEEEEecCCCCEEEEEcC--CCEEEEEEcCCCceeEEeecccc-ceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCc
Q 021121 108 EVHSADYNPTRRDSFITSSW--DDTVKLWTVDRPTSVRTFKEHAY-CVYNATWNPRHSDVFCSASGDCTLRIWDVREMGS 184 (317)
Q Consensus 108 ~v~~~~~~~~~~~~l~~~~~--dg~v~iwd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 184 (317)
....+.|++++. ++++.+. ++.|.++|+.+++.+..+..... ....+++. ++.+.++.-.++.+.++|..+.+.
T Consensus 22 f~~Gl~~~~dg~-Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v 98 (266)
T 2iwa_A 22 FTQGLVYAENDT-LFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSN 98 (266)
T ss_dssp CEEEEEECSTTE-EEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEE
T ss_pred CcccEEEeCCCe-EEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcE
Confidence 357899999864 5555443 68999999999999888753222 23345555 345666666789999999999988
Q ss_pred eeeeccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEec--CCC---ceeEEEecCCCCeeEEeeecCC
Q 021121 185 TMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNG--HGY---AVRKVKFSPHRRNLLASCSYDM 259 (317)
Q Consensus 185 ~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~--~~~---~v~~~~~~~~~~~~l~~~~~d~ 259 (317)
+..+...... ...+++ +++.++++..++.|.++|..+.+. ...+.- ... .++.+.|. ++. +.+....++
T Consensus 99 ~~~i~~g~~~--g~glt~-Dg~~l~vs~gs~~l~viD~~t~~v-~~~I~Vg~~~~p~~~~nele~~-dg~-lyvn~~~~~ 172 (266)
T 2iwa_A 99 IKNFTHQMKD--GWGLAT-DGKILYGSDGTSILYEIDPHTFKL-IKKHNVKYNGHRVIRLNELEYI-NGE-VWANIWQTD 172 (266)
T ss_dssp EEEEECCSSS--CCEEEE-CSSSEEEECSSSEEEEECTTTCCE-EEEEECEETTEECCCEEEEEEE-TTE-EEEEETTSS
T ss_pred EEEEECCCCC--eEEEEE-CCCEEEEECCCCeEEEEECCCCcE-EEEEEECCCCcccccceeEEEE-CCE-EEEecCCCC
Confidence 8887633111 233444 555555555788999999988764 444332 111 35678888 664 566655678
Q ss_pred eEEEEecccccceeeeeecc-------------cceeEeEEEEeccCCeEEEeecCCcEEEEecCCC
Q 021121 260 TVCLWDFMVEDALVGRYDHH-------------TEFAVGVDMSVLVEGLLASTGWDELVYVWQQGMD 313 (317)
Q Consensus 260 ~i~vwd~~~~~~~~~~~~~~-------------~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~ 313 (317)
.|.+.|..+++ +...+.-. ....++|+|+|+++.+++++...+.+.+-++...
T Consensus 173 ~V~vID~~tg~-V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 173 CIARISAKDGT-LLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EEEEEETTTCC-EEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred eEEEEECCCCc-EEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 99999999987 44444421 1356899999996678888888999999888654
No 240
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.30 E-value=2.6e-10 Score=92.57 Aligned_cols=253 Identities=9% Similarity=-0.012 Sum_probs=153.9
Q ss_pred CCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCc
Q 021121 20 ESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPI 99 (317)
Q Consensus 20 ~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~ 99 (317)
++.+.+++. ++.|..|| .+... ..... .....+.++...+++ .+..++.+ +..+|. .+ +..
T Consensus 30 ~g~l~v~t~-------~~~l~~~d-~~g~~-~~~~~--~~~~~~~~~~~~~~g--~l~v~t~~--l~~~d~-~g---~~~ 90 (330)
T 3hxj_A 30 NGTIYLGSS-------NKNLYAIN-TDGSV-KWFFK--SGEIIECRPSIGKDG--TIYFGSDK--VYAINP-DG---TEK 90 (330)
T ss_dssp TSCEECSST-------TTTTEEEC-TTSCE-EESSC--GGGEEEECCEETTTT--EECCSSCE--EEEECC-CG---GGG
T ss_pred CCeEEEEcC-------CCEEEEEC-CCCcE-EEEEe--cCCCcccceEEecCC--cEEEecCc--EEEECC-CC---cEE
Confidence 455555543 67888888 54431 11111 122234666666665 45555544 777764 22 333
Q ss_pred eeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeeccccceEEEEEecCCCCeEEEEeCCCeEEEEeC
Q 021121 100 RSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDV 179 (317)
Q Consensus 100 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~ 179 (317)
..+...........+. + . .+..++.++.|..+|.+ ++...........+.++...++ +. +..++.++.|..+|.
T Consensus 91 ~~~~~~~~~~~~~~~~-~-~-~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~-g~-l~vgt~~~~l~~~d~ 164 (330)
T 3hxj_A 91 WRFDTKKAIVSDFTIF-E-D-ILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSED-GT-IYVGSNDNYLYAINP 164 (330)
T ss_dssp GGSCC-----CCEEEE-T-T-EEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTT-SC-EEEECTTSEEEEECT
T ss_pred EEEECCCCcccCceEE-C-C-EEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCC-CE-EEEEcCCCEEEEECC
Confidence 3322222222223333 3 3 68888889999999998 7776666555555566666655 44 556788899999999
Q ss_pred CCCCceeeeccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEecCCCceeEEEecCCCCeeEEeeecCC
Q 021121 180 REMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDM 259 (317)
Q Consensus 180 ~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~ 259 (317)
. ++....+......+.++...+ ++.+++. + +.+..+| .+++. ..........+.++...+++. |..++.++
T Consensus 165 ~-g~~~~~~~~~~~~~~~~~~d~-~g~l~v~-t--~~l~~~d-~~g~~-~~~~~~~~~~~~~~~~~~~g~--l~v~t~~~ 235 (330)
T 3hxj_A 165 D-GTEKWRFKTNDAITSAASIGK-DGTIYFG-S--DKVYAIN-PDGTE-KWNFYAGYWTVTRPAISEDGT--IYVTSLDG 235 (330)
T ss_dssp T-SCEEEEEECSSCCCSCCEECT-TCCEEEE-S--SSEEEEC-TTSCE-EEEECCSSCCCSCCEECTTSC--EEEEETTT
T ss_pred C-CCEeEEEecCCCceeeeEEcC-CCEEEEE-e--CEEEEEC-CCCcE-EEEEccCCcceeceEECCCCe--EEEEcCCC
Confidence 8 776666655555667777776 6665554 4 7899999 55443 444444556788889988875 55667778
Q ss_pred eEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEeecCCcEEEEec
Q 021121 260 TVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQ 310 (317)
Q Consensus 260 ~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~ 310 (317)
.+..+|. +++ ....+......+..+...+ +..|..++.+|.|..+|.
T Consensus 236 gl~~~~~-~g~-~~~~~~~~~~~~~~~~~~~--~g~l~v~t~~ggl~~~d~ 282 (330)
T 3hxj_A 236 HLYAINP-DGT-EKWRFKTGKRIESSPVIGN--TDTIYFGSYDGHLYAINP 282 (330)
T ss_dssp EEEEECT-TSC-EEEEEECSSCCCSCCEECT--TSCEEEECTTCEEEEECT
T ss_pred eEEEECC-CCC-EeEEeeCCCCccccceEcC--CCeEEEecCCCCEEEECC
Confidence 8888874 343 2333333333344455544 346777778888888885
No 241
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.30 E-value=2e-10 Score=93.99 Aligned_cols=252 Identities=9% Similarity=-0.010 Sum_probs=147.9
Q ss_pred EEEEecCCCCeEEEEEeccccc----ccCceEEEEecCCCCCcceeeeeec-C-----CCCeeEEEecCCCCCeEEEEEc
Q 021121 12 SVKFSPFYESRLAVATAQNFGI----LGNGRVHVLDLSPAAPALTELVAFD-T-----ADGVYDLAWSESHDSLLIAAVA 81 (317)
Q Consensus 12 ~~~~~p~~~~~~~~~~~~~~~~----~~~g~i~i~~~~~~~~~~~~~~~~~-~-----~~~v~~~~~~~~~~~~l~~~~~ 81 (317)
.+.++|+. ..+.++.. .+.- ..++.|.+||..+... ...+. .+ . ......++++|||. +++++..
T Consensus 69 ~i~~spDg-~~lyVan~-~~~r~~~G~~~~~VsviD~~T~~v-v~~I~-v~~~~~~~~g~~P~~ia~SpDGk-~lyVan~ 143 (368)
T 1mda_H 69 LAVAGHSG-SDFALAST-SFARSAKGKRTDYVEVFDPVTFLP-IADIE-LPDAPRFSVGPRVHIIGNCASSA-CLLFFLF 143 (368)
T ss_dssp EEEECTTS-SCEEEEEE-EETTTTSSSEEEEEEEECTTTCCE-EEEEE-ETTSCSCCBSCCTTSEEECTTSS-CEEEEEC
T ss_pred ceEECCCC-CEEEEEcc-cccccccCCCCCEEEEEECCCCCE-EEEEE-CCCccccccCCCcceEEEcCCCC-EEEEEcc
Confidence 79999963 23333321 0000 0167899999988762 22221 11 0 13466899999995 6666654
Q ss_pred --CCeEEE--EEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCC-----CceeE----Eeecc
Q 021121 82 --DGSVKI--YDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDR-----PTSVR----TFKEH 148 (317)
Q Consensus 82 --dg~i~v--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~-----~~~~~----~~~~~ 148 (317)
+..|.+ +|..+ +..+.. .+. ....|++...+++.+.||.+.+.|+++ ++... .+...
T Consensus 144 ~~~~~v~V~~iD~~t------v~~i~v-~~~---~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg 213 (368)
T 1mda_H 144 GSSAAAGLSVPGASD------DQLTKS-ASC---FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCS 213 (368)
T ss_dssp SSSCEEEEEETTTEE------EEEEEC-SSC---CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBC
T ss_pred CCCCeEEEEEEchhh------ceEEEC-CCc---eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCC
Confidence 467888 77653 222221 111 224566666777788899998889876 33221 11112
Q ss_pred ccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCc--eeeecc-------C---ccceEEEEecCCCCcEEEEEec---
Q 021121 149 AYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGS--TMIIPA-------H---EFEILACDWNKYDDCLIASASV--- 213 (317)
Q Consensus 149 ~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~-------~---~~~v~~i~~~~~~~~~l~~~~~--- 213 (317)
..+. . .++ +..++..+. +.+.+.|...... +..+.. + ......++++| +++.++++..
T Consensus 214 ~~P~---~-~~~-~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~-dg~~lyV~~~~~~ 286 (368)
T 1mda_H 214 SQAA---Q-ANY-PGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLK-NTDGIMILTVEHS 286 (368)
T ss_dssp SCCE---E-ETT-TTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEET-TTTEEEEEEEECS
T ss_pred CCcc---c-ccc-CCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcC-CCCEEEEEecccc
Confidence 2333 3 666 444445555 8999999865321 121211 0 01122278999 7666665432
Q ss_pred ------CCcEEEEEccCCCccEEEEecCCCceeEEEecCCCCeeEEeee-cCCeEEEEecccccceeeeeecccceeEeE
Q 021121 214 ------DKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCS-YDMTVCLWDFMVEDALVGRYDHHTEFAVGV 286 (317)
Q Consensus 214 ------d~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~ 286 (317)
++.+.++|+.+.+. +..+.... ....++|+|+++.++++.. .++.|.++|+.+.+ .+..+..... ...+
T Consensus 287 ~~~~~~~~~~~ViD~~t~~v-v~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~k-vv~~I~vg~~-P~~i 362 (368)
T 1mda_H 287 RSCLAAAENTSSVTASVGQT-SGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQ-DQSSVELDKG-PESL 362 (368)
T ss_dssp SCTTSCEEEEEEEESSSCCE-EECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSCE-EEEECCCCSC-CCEE
T ss_pred CcccccCCCEEEEECCCCeE-EEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCCc-EEEEEECCCC-CCEE
Confidence 23566999998764 55544332 5789999999987777777 59999999999987 4555554332 3455
Q ss_pred EEE
Q 021121 287 DMS 289 (317)
Q Consensus 287 ~~~ 289 (317)
++.
T Consensus 363 ~~~ 365 (368)
T 1mda_H 363 SVQ 365 (368)
T ss_dssp ECC
T ss_pred Eee
Confidence 543
No 242
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.29 E-value=3.5e-08 Score=81.83 Aligned_cols=225 Identities=8% Similarity=-0.009 Sum_probs=144.6
Q ss_pred CceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEe
Q 021121 36 NGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYN 115 (317)
Q Consensus 36 ~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 115 (317)
...|+.+++.... ...+ ......+..++|.+.+..++++-...+.|..+++... .....+.........+++.
T Consensus 95 ~~~I~~i~~~~~~--~~~~--~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~---~~~~~~~~~~~~p~glavd 167 (386)
T 3v65_B 95 RIDIRQVLPHRSE--YTLL--LNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGS---NVEEVVSTGLESPGGLAVD 167 (386)
T ss_dssp BSCEEEECTTSCC--CEEE--ECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---CEEEEECSSCSCCCCEEEE
T ss_pred CccceeeccCCCc--EEEE--ecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCC---CcEEEEeCCCCCccEEEEE
Confidence 3478888876543 2222 2344568899999876556666666788988887643 2222222223345678888
Q ss_pred cCCCCEEEEEcCCCEEEEEEcCCCceeEEeeccccceEEEEEecCCCCeEEEEeCC-CeEEEEeCCCCCceeeeccCccc
Q 021121 116 PTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGD-CTLRIWDVREMGSTMIIPAHEFE 194 (317)
Q Consensus 116 ~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-g~i~i~d~~~~~~~~~~~~~~~~ 194 (317)
+.+..++++-...+.|.+.+++.......+...-.....+++.|.++.++++-... +.|..+++............-..
T Consensus 168 ~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~ 247 (386)
T 3v65_B 168 WVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFW 247 (386)
T ss_dssp TTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSC
T ss_pred eCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCC
Confidence 76664666767778999999875543333333345689999999856666665555 78999998754433333333345
Q ss_pred eEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEeccccc
Q 021121 195 ILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVED 270 (317)
Q Consensus 195 v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~ 270 (317)
.+.++++|..+.++++-...+.|..+|+..... .............+++. .+ .++++-...+.|..++..+++
T Consensus 248 PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~-~~~~~~~~~~P~giav~-~~-~ly~td~~~~~V~~~~~~~G~ 320 (386)
T 3v65_B 248 PNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR-KAVISQGLPHPFAITVF-ED-SLYWTDWHTKSINSANKFTGK 320 (386)
T ss_dssp EEEEEEEGGGTEEEEEETTTTEEEEECTTSCSC-EEEECSSCSSEEEEEEE-TT-EEEEEETTTTEEEEEETTTCC
T ss_pred eeeEEEeCCCCEEEEEECCCCEEEEEeCCCCee-EEEEECCCCCceEEEEE-CC-EEEEeeCCCCeEEEEECCCCc
Confidence 689999984666666666778899999875432 33333333456778883 33 367776677888888865554
No 243
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.24 E-value=2.7e-07 Score=74.35 Aligned_cols=227 Identities=10% Similarity=0.012 Sum_probs=140.9
Q ss_pred CceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCC-CCCceeeccCCcceEEEEE
Q 021121 36 NGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPT-ANPIRSLHEHTREVHSADY 114 (317)
Q Consensus 36 ~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~-~~~~~~~~~~~~~v~~~~~ 114 (317)
...|+..++.... ...+ .........++|.+.++.++++-...+.|..+++..... ......+...-.....+++
T Consensus 9 ~~~I~~i~~~~~~--~~~~--~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glav 84 (316)
T 1ijq_A 9 RHEVRKMTLDRSE--YTSL--IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAV 84 (316)
T ss_dssp BSSEEEEETTSCC--CEEE--ECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEE
T ss_pred CCeEEEEECCCcc--eEeh--hcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEE
Confidence 3479999988754 2222 234556889999987655666666678999999864110 0111222222245578899
Q ss_pred ecCCCCEEEEEcCCCEEEEEEcCCCceeEEeeccccceEEEEEecCCCCeEEEEeCC-CeEEEEeCCCCCceeee-ccCc
Q 021121 115 NPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGD-CTLRIWDVREMGSTMII-PAHE 192 (317)
Q Consensus 115 ~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-g~i~i~d~~~~~~~~~~-~~~~ 192 (317)
.+.+..++++-...+.|.+.+++.......+...-.....+++.|.++.++++.... +.|...++... ....+ ...-
T Consensus 85 d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~-~~~~~~~~~~ 163 (316)
T 1ijq_A 85 DWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVTENI 163 (316)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-CEEEEECSSC
T ss_pred eecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC-CeEEEEECCC
Confidence 876553666667789999999875443333333345689999999756666555443 78988887643 33333 2233
Q ss_pred cceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEec--CCCceeEEEecCCCCeeEEeeecCCeEEEEeccccc
Q 021121 193 FEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNG--HGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVED 270 (317)
Q Consensus 193 ~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~ 270 (317)
.....++++|..+.++++-...+.|..+|+..... ...... .......+++.. + +++++-...+.|..++..+++
T Consensus 164 ~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~-~~~~~~~~~~~~P~giav~~-~-~ly~~d~~~~~V~~~~~~~g~ 240 (316)
T 1ijq_A 164 QWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVFE-D-KVFWTDIINEAIFSANRLTGS 240 (316)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECTTTTSSEEEEEEET-T-EEEEEETTTTEEEEEETTTCC
T ss_pred CCceEEEEeccCCEEEEEECCCCeEEEEecCCCce-EEEeecCCccCCcEEEEEEC-C-EEEEEECCCCeEEEEeCCCCc
Confidence 45789999984556666666677999999875332 222221 223456788853 3 466666677889988876554
No 244
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.22 E-value=8.5e-09 Score=79.04 Aligned_cols=190 Identities=11% Similarity=0.145 Sum_probs=126.9
Q ss_pred eeeeecCCCC--eeEEEecCCCCCeEEEEEcCC--eEEEEEeCCCCCCCCceeeccCCcce--EEEEEecCCCCEEEEEc
Q 021121 53 ELVAFDTADG--VYDLAWSESHDSLLIAAVADG--SVKIYDTALPPTANPIRSLHEHTREV--HSADYNPTRRDSFITSS 126 (317)
Q Consensus 53 ~~~~~~~~~~--v~~~~~~~~~~~~l~~~~~dg--~i~v~~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~~l~~~~ 126 (317)
.+..+.|... ...+.|+ ++ .+..+.+.+| .|+++|++++ +.+...... ... ..++.. +..+.+..-
T Consensus 33 vv~~~phd~~~ftqGL~~~-~~-~LyestG~~g~S~v~~vD~~Tg---kv~~~~~l~-~~~FgeGit~~--g~~ly~ltw 104 (262)
T 3nol_A 33 IVHSYPHDTKAFTEGFFYR-NG-YFYESTGLNGRSSIRKVDIESG---KTLQQIELG-KRYFGEGISDW--KDKIVGLTW 104 (262)
T ss_dssp EEEEEECCTTCEEEEEEEE-TT-EEEEEEEETTEEEEEEECTTTC---CEEEEEECC-TTCCEEEEEEE--TTEEEEEES
T ss_pred EEEEecCCCCcccceEEEE-CC-EEEEECCCCCCceEEEEECCCC---cEEEEEecC-CccceeEEEEe--CCEEEEEEe
Confidence 3444455544 4788898 55 5666666666 8999999877 444444332 222 234443 443555566
Q ss_pred CCCEEEEEEcCCCceeEEeeccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeeccC--c---cceEEEEec
Q 021121 127 WDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAH--E---FEILACDWN 201 (317)
Q Consensus 127 ~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~---~~v~~i~~~ 201 (317)
.++.+.++|.++.+.+.++.... .-..++ ++ +..|+.+..++.|.++|..+.+.+..+... . ..++.+.|.
T Consensus 105 ~~~~v~v~D~~t~~~~~ti~~~~-eG~glt--~d-g~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~ 180 (262)
T 3nol_A 105 KNGLGFVWNIRNLRQVRSFNYDG-EGWGLT--HN-DQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV 180 (262)
T ss_dssp SSSEEEEEETTTCCEEEEEECSS-CCCCEE--EC-SSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE
T ss_pred eCCEEEEEECccCcEEEEEECCC-CceEEe--cC-CCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE
Confidence 78999999999999999887533 223444 55 455555556788999999998888776542 1 224557776
Q ss_pred CCCCcEEEEEecCCcEEEEEccCCCccEEEEecC------------CCceeEEEecCCCCeeEEeeec
Q 021121 202 KYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGH------------GYAVRKVKFSPHRRNLLASCSY 257 (317)
Q Consensus 202 ~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~------------~~~v~~~~~~~~~~~~l~~~~~ 257 (317)
++.+++..-.+..|.+.|.++++. +..+... ....+.|+|+|+++.++++|-.
T Consensus 181 --~G~lyan~w~~~~I~vIDp~tG~V-~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 181 --DGEIFANVWQTNKIVRIDPETGKV-TGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp --TTEEEEEETTSSEEEEECTTTCBE-EEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred --CCEEEEEEccCCeEEEEECCCCcE-EEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence 677777666788999999998774 4444321 2356899999999877777643
No 245
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.19 E-value=6e-09 Score=79.88 Aligned_cols=181 Identities=7% Similarity=0.085 Sum_probs=120.7
Q ss_pred ceEEEEEecCCCCEEEEEcCCC--EEEEEEcCCCceeEEeeccccc-eEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCc
Q 021121 108 EVHSADYNPTRRDSFITSSWDD--TVKLWTVDRPTSVRTFKEHAYC-VYNATWNPRHSDVFCSASGDCTLRIWDVREMGS 184 (317)
Q Consensus 108 ~v~~~~~~~~~~~~l~~~~~dg--~v~iwd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 184 (317)
-...+.|+ ++. ++.+.+.+| .|+++|+++++.+..+...... -..++.. +..+.+..-.++.+.+||..+.+.
T Consensus 44 ftqGL~~~-~~~-LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~--g~~ly~ltw~~~~v~v~D~~t~~~ 119 (262)
T 3nol_A 44 FTEGFFYR-NGY-FYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDW--KDKIVGLTWKNGLGFVWNIRNLRQ 119 (262)
T ss_dssp EEEEEEEE-TTE-EEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTCCE
T ss_pred ccceEEEE-CCE-EEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEe--CCEEEEEEeeCCEEEEEECccCcE
Confidence 34788898 554 677777666 8999999999998888643322 1234443 345555666789999999999999
Q ss_pred eeeeccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEec--CC---CceeEEEecCCCCeeEEeeecCC
Q 021121 185 TMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNG--HG---YAVRKVKFSPHRRNLLASCSYDM 259 (317)
Q Consensus 185 ~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~--~~---~~v~~~~~~~~~~~~l~~~~~d~ 259 (317)
+.++...... ..++ + ++..|+.+..++.|.++|..+.+. +..+.. .. ..++.+.|. +|+ +.+..-.++
T Consensus 120 ~~ti~~~~eG-~glt--~-dg~~L~~SdGs~~i~~iDp~T~~v-~~~I~V~~~g~~~~~lNELe~~-~G~-lyan~w~~~ 192 (262)
T 3nol_A 120 VRSFNYDGEG-WGLT--H-NDQYLIMSDGTPVLRFLDPESLTP-VRTITVTAHGEELPELNELEWV-DGE-IFANVWQTN 192 (262)
T ss_dssp EEEEECSSCC-CCEE--E-CSSCEEECCSSSEEEEECTTTCSE-EEEEECEETTEECCCEEEEEEE-TTE-EEEEETTSS
T ss_pred EEEEECCCCc-eEEe--c-CCCEEEEECCCCeEEEEcCCCCeE-EEEEEeccCCccccccceeEEE-CCE-EEEEEccCC
Confidence 9888743322 3444 3 455555555678899999998764 444332 22 234557776 565 565555688
Q ss_pred eEEEEecccccceeeeeecc------------cceeEeEEEEeccCCeEEEee
Q 021121 260 TVCLWDFMVEDALVGRYDHH------------TEFAVGVDMSVLVEGLLASTG 300 (317)
Q Consensus 260 ~i~vwd~~~~~~~~~~~~~~------------~~~v~~~~~~~~~~~~l~s~~ 300 (317)
.|.+.|..+++ +...+.-. ....++|+++|+.+.++++|-
T Consensus 193 ~I~vIDp~tG~-V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 193 KIVRIDPETGK-VTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp EEEEECTTTCB-EEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred eEEEEECCCCc-EEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 99999999987 33333321 235689999998555555553
No 246
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.18 E-value=5.4e-07 Score=73.64 Aligned_cols=237 Identities=7% Similarity=-0.037 Sum_probs=148.9
Q ss_pred CeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCce
Q 021121 62 GVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTS 141 (317)
Q Consensus 62 ~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~ 141 (317)
..+|.+..++. .|+.+. ...|+..++... ....+.........++|.+....++.+-...+.|..+++.....
T Consensus 35 ~~~C~~~~~~~--~ll~~~-~~~I~~i~~~g~----~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~ 107 (349)
T 3v64_C 35 RRSCKALGPEP--VLLFAN-RIDIRQVLPHRS----EYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNV 107 (349)
T ss_dssp SSCEEESSSCC--EEEEEC-BSCEEEECTTSC----CEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CCcccccccCc--eeEeec-ccceEEEeCCCC----eeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCc
Confidence 34555555532 444443 345777776532 22222223445789999987664566666788999999987654
Q ss_pred eEEeeccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEecC-CcEEEE
Q 021121 142 VRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVD-KSIKIW 220 (317)
Q Consensus 142 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d-~~i~v~ 220 (317)
.............+++.+.+++++++-...+.|.+.++........+...-.....++++|..+.++++-... +.|..+
T Consensus 108 ~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~ 187 (349)
T 3v64_C 108 EEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEAS 187 (349)
T ss_dssp EEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEE
T ss_pred eEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEE
Confidence 4444333345678999987567777777788999999875543333333334568999998556666665555 789999
Q ss_pred EccCCCccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEee
Q 021121 221 DVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTG 300 (317)
Q Consensus 221 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~ 300 (317)
++..... .......-.....++++|++..+.++-...+.|..+|+.... .............++++. . +.++++-.
T Consensus 188 ~~dG~~~-~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~-~~~~~~~~~~~P~giav~-~-~~ly~td~ 263 (349)
T 3v64_C 188 SMDGSGR-RIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSH-RKAVISQGLPHPFAITVF-E-DSLYWTDW 263 (349)
T ss_dssp ETTSCSC-EESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSSCSSEEEEEEE-T-TEEEEEET
T ss_pred eCCCCCc-EEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCc-eEEEEeCCCCCceEEEEE-C-CEEEEecC
Confidence 8875332 222222234568999999877666666667889999987543 222222223345677773 2 55666665
Q ss_pred cCCcEEEEe
Q 021121 301 WDELVYVWQ 309 (317)
Q Consensus 301 ~dg~i~~w~ 309 (317)
..+.|...+
T Consensus 264 ~~~~V~~~~ 272 (349)
T 3v64_C 264 HTKSINSAN 272 (349)
T ss_dssp TTTEEEEEE
T ss_pred CCCeEEEEE
Confidence 677777776
No 247
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.18 E-value=1.9e-07 Score=77.48 Aligned_cols=237 Identities=7% Similarity=-0.033 Sum_probs=149.7
Q ss_pred eeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCcee
Q 021121 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSV 142 (317)
Q Consensus 63 v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~ 142 (317)
-.|.+..+. .+|+.+. ...|+..++... .. ..+.........++|.+.+..++++-...+.|..++++.....
T Consensus 79 ~~C~~~~~~--~~l~~~~-~~~I~~i~~~~~---~~-~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~ 151 (386)
T 3v65_B 79 RSCKALGPE--PVLLFAN-RIDIRQVLPHRS---EY-TLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVE 151 (386)
T ss_dssp SCEEECSSC--CEEEEEC-BSCEEEECTTSC---CC-EEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEE
T ss_pred CeECCcccc--ceeEeec-CccceeeccCCC---cE-EEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcE
Confidence 344444442 2444443 356777777643 22 2222234567899999876646666667889999999876544
Q ss_pred EEeeccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEecC-CcEEEEE
Q 021121 143 RTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVD-KSIKIWD 221 (317)
Q Consensus 143 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d-~~i~v~d 221 (317)
..+.........+++.+.++.++++-...+.|.+.++........+...-.....++++|..+.++++-... +.|..++
T Consensus 152 ~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~ 231 (386)
T 3v65_B 152 EVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASS 231 (386)
T ss_dssp EEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred EEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEe
Confidence 444333345678899987567777777788899999875443333333335578999998556566665555 7888888
Q ss_pred ccCCCccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEeec
Q 021121 222 VRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGW 301 (317)
Q Consensus 222 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~ 301 (317)
+..... .......-.....|+++|++..++++-...+.|..+|+.... .............+|++. . +.++++-..
T Consensus 232 ~dG~~~-~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~-~~~~~~~~~~~P~giav~-~-~~ly~td~~ 307 (386)
T 3v65_B 232 MDGSGR-RIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSH-RKAVISQGLPHPFAITVF-E-DSLYWTDWH 307 (386)
T ss_dssp TTSCSC-EEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCS-CEEEECSSCSSEEEEEEE-T-TEEEEEETT
T ss_pred CCCCCc-EEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCe-eEEEEECCCCCceEEEEE-C-CEEEEeeCC
Confidence 875432 233333334578999998777666666677889999986543 222222223345677773 2 556666666
Q ss_pred CCcEEEEec
Q 021121 302 DELVYVWQQ 310 (317)
Q Consensus 302 dg~i~~w~~ 310 (317)
.+.|..++.
T Consensus 308 ~~~V~~~~~ 316 (386)
T 3v65_B 308 TKSINSANK 316 (386)
T ss_dssp TTEEEEEET
T ss_pred CCeEEEEEC
Confidence 778877773
No 248
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.17 E-value=4.7e-09 Score=89.65 Aligned_cols=234 Identities=12% Similarity=0.081 Sum_probs=149.6
Q ss_pred CCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEe-c-CCCCCeEEEEE-----------------
Q 021121 20 ESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAW-S-ESHDSLLIAAV----------------- 80 (317)
Q Consensus 20 ~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~-~-~~~~~~l~~~~----------------- 80 (317)
+++.+..+... +++|.+.|+...+ ...+...........+++ . |+++ ++++++
T Consensus 100 DG~~lfVnd~~-----~~rVavIdl~t~~--~~~ii~ip~g~~phg~~~~~~p~~~-~v~~~~~~~~p~~~dg~~l~~~~ 171 (595)
T 1fwx_A 100 DGRFLFMNDKA-----NTRVARVRCDVMK--CDAILEIPNAKGIHGLRPQKWPRSN-YVFCNGEDETPLVNDGTNMEDVA 171 (595)
T ss_dssp EEEEEEEEETT-----TTEEEEEETTTTE--EEEEEECSSCCSEEEEEECCSSBCS-EEEEEECSCEESSCSSSSTTCGG
T ss_pred CCCEEEEEcCC-----CCEEEEEECCCce--EeeEEeCCCCCCCcceeeeecCCCc-EEEEecccccccCCCCccccccc
Confidence 45666655542 7789999998764 222224455567889998 4 8885 666664
Q ss_pred -cCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCC------------------------------
Q 021121 81 -ADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDD------------------------------ 129 (317)
Q Consensus 81 -~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg------------------------------ 129 (317)
.++.+.+.|.++. +....+.--. .-..++++|+|+ ++++.+.+.
T Consensus 172 ~~~~~vtvID~~t~---~v~~qI~Vgg-~pd~~~~spdGk-~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~ 246 (595)
T 1fwx_A 172 NYVNVFTAVDADKW---EVAWQVLVSG-NLDNCDADYEGK-WAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIA 246 (595)
T ss_dssp GEEEEEEEEETTTT---EEEEEEEESS-CCCCEEECSSSS-EEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHH
T ss_pred ccCceEEEEECCCC---eEEEEEEeCC-CccceEECCCCC-EEEEEecCcccCcchhhccccccceEEEeeccceeEecc
Confidence 3457889998754 4444443212 345577889988 565555332
Q ss_pred --------EEEEEEcCC--Cce-eEEeeccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCC------------cee
Q 021121 130 --------TVKLWTVDR--PTS-VRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMG------------STM 186 (317)
Q Consensus 130 --------~v~iwd~~~--~~~-~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~------------~~~ 186 (317)
.|.+.|..+ ++. +..+.. .....++.++|++..+++++..+.+|.++|+.+.+ ...
T Consensus 247 ~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~ 325 (595)
T 1fwx_A 247 AGDYQELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVA 325 (595)
T ss_dssp HTCSEEETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEE
T ss_pred CCCeeEECcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEE
Confidence 366777766 444 344442 34578899999954456666678899999998642 122
Q ss_pred eeccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCC---------CccEEEEecCCCce-----eEEEecCCCCeeE
Q 021121 187 IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNY---------RVPIAVLNGHGYAV-----RKVKFSPHRRNLL 252 (317)
Q Consensus 187 ~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~---------~~~~~~~~~~~~~v-----~~~~~~~~~~~~l 252 (317)
.+. -......++|+| ++...++...|+.|.+||+... ...+..+..|..+- ..+.++|+|++ |
T Consensus 326 ~v~-vG~gP~h~aF~~-dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~-l 402 (595)
T 1fwx_A 326 EPE-LGLGPLHTAFDG-RGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDW-L 402 (595)
T ss_dssp CCB-CCSCEEEEEECT-TSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSE-E
T ss_pred EcC-CCCCcceEEECC-CCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCE-E
Confidence 222 334578999999 8877777788999999999762 23456666554432 23456899995 5
Q ss_pred Eeeec---CCe----------EEEEeccccc
Q 021121 253 ASCSY---DMT----------VCLWDFMVED 270 (317)
Q Consensus 253 ~~~~~---d~~----------i~vwd~~~~~ 270 (317)
++... |+. -.++|+..++
T Consensus 403 ~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 403 VCLSKFSKDRFLNVGPLKPENDQLIDISGDK 433 (595)
T ss_dssp EEEESCCTTSSCCCCSSCCEEEEEEECSSSS
T ss_pred EEcCCCCccccccCCCCCCCcceEEEcCCCc
Confidence 55442 332 2788885544
No 249
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.17 E-value=2.5e-08 Score=76.44 Aligned_cols=188 Identities=9% Similarity=0.088 Sum_probs=129.0
Q ss_pred eeeecCCC--CeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcce--EEEEEecCCCCEEEEEcCCC
Q 021121 54 LVAFDTAD--GVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREV--HSADYNPTRRDSFITSSWDD 129 (317)
Q Consensus 54 ~~~~~~~~--~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~~l~~~~~dg 129 (317)
+..+.|.. -...+.|+. +.+..+.+.+|.|+++|++++ +.+... - .... ..+++ ++..+.+..-.++
T Consensus 46 v~~~phd~~~ftqGL~~~~--~~Ly~stG~~g~v~~iD~~Tg---kv~~~~-l-~~~~FgeGit~--~g~~Ly~ltw~~~ 116 (268)
T 3nok_A 46 IREYPHATNAFTQGLVFHQ--GHFFESTGHQGTLRQLSLESA---QPVWME-R-LGNIFAEGLAS--DGERLYQLTWTEG 116 (268)
T ss_dssp EEEEECCTTCCEEEEEEET--TEEEEEETTTTEEEECCSSCS---SCSEEE-E-CTTCCEEEEEE--CSSCEEEEESSSC
T ss_pred EEEEcCCCccccceEEEEC--CEEEEEcCCCCEEEEEECCCC---cEEeEE-C-CCCcceeEEEE--eCCEEEEEEccCC
Confidence 34444543 346888874 367777788899999999887 444444 1 2222 33444 4444666677789
Q ss_pred EEEEEEcCCCceeEEeeccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeeccCc--c---ceEEEEecCCC
Q 021121 130 TVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHE--F---EILACDWNKYD 204 (317)
Q Consensus 130 ~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~--~---~v~~i~~~~~~ 204 (317)
.+.+||.++.+.+.++... ..-..++ ++ +..|+.+..++.|.++|..+.+.+..+.... . .++.+.|. +
T Consensus 117 ~v~V~D~~Tl~~~~ti~~~-~eGwGLt--~D-g~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~--d 190 (268)
T 3nok_A 117 LLFTWSGMPPQRERTTRYS-GEGWGLC--YW-NGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA--N 190 (268)
T ss_dssp EEEEEETTTTEEEEEEECS-SCCCCEE--EE-TTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--T
T ss_pred EEEEEECCcCcEEEEEeCC-CceeEEe--cC-CCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe--C
Confidence 9999999999999988753 3334555 44 5566666678999999999998887765322 1 34667776 6
Q ss_pred CcEEEEEecCCcEEEEEccCCCccEEEEec-------------CCCceeEEEecCCCCeeEEeeec
Q 021121 205 DCLIASASVDKSIKIWDVRNYRVPIAVLNG-------------HGYAVRKVKFSPHRRNLLASCSY 257 (317)
Q Consensus 205 ~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~~l~~~~~ 257 (317)
+.+++....+..|.+.|.++++. +..+.. .....+.|+++|+++.+++||-.
T Consensus 191 G~lyanvw~s~~I~vIDp~TG~V-~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~ 255 (268)
T 3nok_A 191 GVIYANIWHSSDVLEIDPATGTV-VGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKL 255 (268)
T ss_dssp TEEEEEETTCSEEEEECTTTCBE-EEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETT
T ss_pred CEEEEEECCCCeEEEEeCCCCcE-EEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCC
Confidence 67776666788999999998774 444331 12356899999998877877753
No 250
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.16 E-value=1.3e-06 Score=72.74 Aligned_cols=228 Identities=10% Similarity=0.012 Sum_probs=144.4
Q ss_pred CceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCC-CCCceeeccCCcceEEEEE
Q 021121 36 NGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPT-ANPIRSLHEHTREVHSADY 114 (317)
Q Consensus 36 ~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~-~~~~~~~~~~~~~v~~~~~ 114 (317)
...|+..++.... ...+ ......+..++|.+.++.+.++-...+.|..+++..... ................+++
T Consensus 91 ~~~I~~i~l~~~~--~~~~--~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glav 166 (400)
T 3p5b_L 91 RHEVRKMTLDRSE--YTSL--IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAV 166 (400)
T ss_dssp TTEEEEECTTSCS--CEEE--ECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEE
T ss_pred cceeEEEccCCcc--eeEe--ccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEE
Confidence 4588888887654 2222 245567899999987655555555678898888764211 1122223333456788999
Q ss_pred ecCCCCEEEEEcCCCEEEEEEcCCCceeEEeeccccceEEEEEecCCCCeEEEEeC-CCeEEEEeCCCCCceeeeccCcc
Q 021121 115 NPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASG-DCTLRIWDVREMGSTMIIPAHEF 193 (317)
Q Consensus 115 ~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~ 193 (317)
.+.+..++++-...+.|.+.+++.......+...-.....+++.|.++.++++-.. .+.|...++............-.
T Consensus 167 D~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~ 246 (400)
T 3p5b_L 167 DWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQ 246 (400)
T ss_dssp ETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCS
T ss_pred EecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCC
Confidence 88555466676778899999998665444444344568999999975555555433 47899999875444333333335
Q ss_pred ceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEec--CCCceeEEEecCCCCeeEEeeecCCeEEEEeccccc
Q 021121 194 EILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNG--HGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVED 270 (317)
Q Consensus 194 ~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~ 270 (317)
....|++++..+.++++-...+.|..+|+..... ...... .-.....+++. +..++++-...+.|..+|..+++
T Consensus 247 ~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~-~~~~~~~~~l~~P~gl~v~--~~~lywtd~~~~~V~~~~~~~G~ 322 (400)
T 3p5b_L 247 WPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGS 322 (400)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCCC-EEEEECSSTTSSEEEEEEE--TTEEEEEESSSCSEEEEESSSCC
T ss_pred ceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCcc-EEEEeCCCCCCCCEEEEEe--CCEEEEecCCCCeEEEEEcCCCC
Confidence 6789999984555666656678899999876432 222222 12334567773 33467776677888888866664
No 251
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.15 E-value=3e-07 Score=74.31 Aligned_cols=235 Identities=11% Similarity=0.067 Sum_probs=142.8
Q ss_pred CeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeec--------------------cCCcceEEEEEec-CCCC
Q 021121 62 GVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLH--------------------EHTREVHSADYNP-TRRD 120 (317)
Q Consensus 62 ~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~--------------------~~~~~v~~~~~~~-~~~~ 120 (317)
...+++|.+++ .++.++..++.|..|+.... ....+. ........+++.+ ++.
T Consensus 20 ~p~~i~~d~~g-~~l~v~~~~~~i~~~~~~~~----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~- 93 (322)
T 2fp8_A 20 APNSFTFDSTN-KGFYTSVQDGRVIKYEGPNS----GFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ- 93 (322)
T ss_dssp CCCCEECCTTC-SSEEEECTTSEEEEECCTTT----CEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-
T ss_pred CceEEEEcCCC-CEEEEEcCCCeEEEECCCCC----ceEEEecccccccccccccccchhccccCCCCceEEEcCCCCc-
Confidence 45678899987 57888888899999986543 111111 0123578899997 554
Q ss_pred EEEEEcCCCEEEEEEcCCCceeEEeec-----cccceEEEEEec-CCCCeEEEEeC-----------------CCeEEEE
Q 021121 121 SFITSSWDDTVKLWTVDRPTSVRTFKE-----HAYCVYNATWNP-RHSDVFCSASG-----------------DCTLRIW 177 (317)
Q Consensus 121 ~l~~~~~dg~v~iwd~~~~~~~~~~~~-----~~~~v~~~~~~~-~~~~~l~~~~~-----------------dg~i~i~ 177 (317)
|+.+...+.|..+|..+++. ..+.. ....+..+++.+ + +++.++... ++.|..+
T Consensus 94 -l~v~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~-G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~ 170 (322)
T 2fp8_A 94 -LYIVDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRT-GIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKY 170 (322)
T ss_dssp -EEEEETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTT-CCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEE
T ss_pred -EEEEECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCC-CEEEEECCcccccccccceehcccCCCceEEEE
Confidence 55554455688888775532 22221 113478899999 7 676665432 3678899
Q ss_pred eCCCCCceeeeccCccceEEEEecCCCCcEE-EEEecCCcEEEEEccCCCc-cEEEEecCCCceeEEEecCCCCeeEEee
Q 021121 178 DVREMGSTMIIPAHEFEILACDWNKYDDCLI-ASASVDKSIKIWDVRNYRV-PIAVLNGHGYAVRKVKFSPHRRNLLASC 255 (317)
Q Consensus 178 d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l-~~~~~d~~i~v~d~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 255 (317)
|..+++...... .-.....++++| +++.| ++-...+.|.+|++..... ....+....+ ...++++++|. +.++.
T Consensus 171 d~~~~~~~~~~~-~~~~p~gia~~~-dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~-l~va~ 246 (322)
T 2fp8_A 171 DPSTKETTLLLK-ELHVPGGAEVSA-DSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGH-FWVSS 246 (322)
T ss_dssp ETTTTEEEEEEE-EESCCCEEEECT-TSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSC-EEEEE
T ss_pred eCCCCEEEEecc-CCccCcceEECC-CCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCC-EEEEe
Confidence 987654332222 123356799999 87755 4445668899999875321 1222211223 78899999997 45544
Q ss_pred ec----------CCeEEEEecccccceeeeeeccc----ceeEeEEEEeccCCeEEEeecCCcEEEEecCCC
Q 021121 256 SY----------DMTVCLWDFMVEDALVGRYDHHT----EFAVGVDMSVLVEGLLASTGWDELVYVWQQGMD 313 (317)
Q Consensus 256 ~~----------d~~i~vwd~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~ 313 (317)
.. .+.|..+|.. ++ .+..+.... ..+..+++ .+ +.++++....+.|..+++...
T Consensus 247 ~~~~~~~~~~~~~~~v~~~d~~-G~-~~~~~~~~~g~~~~~~~~~~~-~~-g~L~v~~~~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 247 SEELDGNMHGRVDPKGIKFDEF-GN-ILEVIPLPPPFAGEHFEQIQE-HD-GLLYIGTLFHGSVGILVYDKK 314 (322)
T ss_dssp EEETTSSTTSCEEEEEEEECTT-SC-EEEEEECCTTTTTSCCCEEEE-ET-TEEEEECSSCSEEEEEEC---
T ss_pred cCcccccccCCCccEEEEECCC-CC-EEEEEECCCCCccccceEEEE-eC-CEEEEeecCCCceEEEecccc
Confidence 33 4668888864 33 344444322 34666666 33 566666667888999998754
No 252
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.15 E-value=6.7e-07 Score=72.02 Aligned_cols=228 Identities=8% Similarity=-0.014 Sum_probs=140.2
Q ss_pred eEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCC----CceeEEeecccc
Q 021121 75 LLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDR----PTSVRTFKEHAY 150 (317)
Q Consensus 75 ~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~----~~~~~~~~~~~~ 150 (317)
+|+.+.. ..|+..++... .....+ ........++|++.+..++++-...+.|..+++.. ......+...-.
T Consensus 3 ~ll~~~~-~~I~~i~~~~~---~~~~~~-~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~ 77 (316)
T 1ijq_A 3 YLFFTNR-HEVRKMTLDRS---EYTSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQ 77 (316)
T ss_dssp EEEEECB-SSEEEEETTSC---CCEEEE-CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCS
T ss_pred EEEEECC-CeEEEEECCCc---ceEehh-cCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCC
Confidence 3444433 45888888754 222222 23456789999987664666666779999999876 222222322224
Q ss_pred ceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEecC-CcEEEEEccCCCccE
Q 021121 151 CVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVD-KSIKIWDVRNYRVPI 229 (317)
Q Consensus 151 ~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d-~~i~v~d~~~~~~~~ 229 (317)
.+..+++.+.++++.++-...+.|.++|+........+.........++++|..+.++++.... +.|..+++..... .
T Consensus 78 ~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~-~ 156 (316)
T 1ijq_A 78 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-Y 156 (316)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE-E
T ss_pred CcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCe-E
Confidence 5688999876466666767788999999875433333332334578999998455555554433 6888888764321 2
Q ss_pred EEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeee--cccceeEeEEEEeccCCeEEEeecCCcEEE
Q 021121 230 AVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYD--HHTEFAVGVDMSVLVEGLLASTGWDELVYV 307 (317)
Q Consensus 230 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~ 307 (317)
......-.....++++|++..++++-...+.|..+|+.... ...... ..-....++++. . +.++++-...+.|..
T Consensus 157 ~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~-~~~~~~~~~~~~~P~giav~-~-~~ly~~d~~~~~V~~ 233 (316)
T 1ijq_A 157 SLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAVF-E-DKVFWTDIINEAIFS 233 (316)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEEECTTTTSSEEEEEEE-T-TEEEEEETTTTEEEE
T ss_pred EEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCc-eEEEeecCCccCCcEEEEEE-C-CEEEEEECCCCeEEE
Confidence 22222334678999999887666666677899999987533 111111 112335677774 2 556666666788888
Q ss_pred EecC
Q 021121 308 WQQG 311 (317)
Q Consensus 308 w~~~ 311 (317)
++..
T Consensus 234 ~~~~ 237 (316)
T 1ijq_A 234 ANRL 237 (316)
T ss_dssp EETT
T ss_pred EeCC
Confidence 8754
No 253
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.15 E-value=1.3e-08 Score=77.99 Aligned_cols=179 Identities=7% Similarity=0.025 Sum_probs=123.8
Q ss_pred ceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeeccccce--EEEEEecCCCCeEEEEeCCCeEEEEeCCCCCce
Q 021121 108 EVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCV--YNATWNPRHSDVFCSASGDCTLRIWDVREMGST 185 (317)
Q Consensus 108 ~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v--~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 185 (317)
-...+.|+. + .++.+.+.+|.|+++|+++++.+..+ ... .. ..+++ .+..+.+..-.++.+.+||.++.+.+
T Consensus 56 ftqGL~~~~-~-~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~-~~FgeGit~--~g~~Ly~ltw~~~~v~V~D~~Tl~~~ 129 (268)
T 3nok_A 56 FTQGLVFHQ-G-HFFESTGHQGTLRQLSLESAQPVWME-RLG-NIFAEGLAS--DGERLYQLTWTEGLLFTWSGMPPQRE 129 (268)
T ss_dssp CEEEEEEET-T-EEEEEETTTTEEEECCSSCSSCSEEE-ECT-TCCEEEEEE--CSSCEEEEESSSCEEEEEETTTTEEE
T ss_pred ccceEEEEC-C-EEEEEcCCCCEEEEEECCCCcEEeEE-CCC-CcceeEEEE--eCCEEEEEEccCCEEEEEECCcCcEE
Confidence 346788874 3 37888888999999999999988887 332 33 33444 44566667778999999999999998
Q ss_pred eeeccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEec--CCC---ceeEEEecCCCCeeEEeeecCCe
Q 021121 186 MIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNG--HGY---AVRKVKFSPHRRNLLASCSYDMT 260 (317)
Q Consensus 186 ~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~--~~~---~v~~~~~~~~~~~~l~~~~~d~~ 260 (317)
.++..... -..++ + +++.|+.+..++.|.++|..+.+. +..+.. +.. .++.+.|. +|+ +.+..-.++.
T Consensus 130 ~ti~~~~e-GwGLt--~-Dg~~L~vSdGs~~l~~iDp~T~~v-~~~I~V~~~g~~v~~lNeLe~~-dG~-lyanvw~s~~ 202 (268)
T 3nok_A 130 RTTRYSGE-GWGLC--Y-WNGKLVRSDGGTMLTFHEPDGFAL-VGAVQVKLRGQPVELINELECA-NGV-IYANIWHSSD 202 (268)
T ss_dssp EEEECSSC-CCCEE--E-ETTEEEEECSSSEEEEECTTTCCE-EEEEECEETTEECCCEEEEEEE-TTE-EEEEETTCSE
T ss_pred EEEeCCCc-eeEEe--c-CCCEEEEECCCCEEEEEcCCCCeE-EEEEEeCCCCcccccccccEEe-CCE-EEEEECCCCe
Confidence 88874332 23444 3 455666666788999999998764 444332 222 34667777 664 5655556889
Q ss_pred EEEEecccccceeeeeec-------------ccceeEeEEEEeccCCeEEEee
Q 021121 261 VCLWDFMVEDALVGRYDH-------------HTEFAVGVDMSVLVEGLLASTG 300 (317)
Q Consensus 261 i~vwd~~~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~~l~s~~ 300 (317)
|.+.|..+++ +...+.- .....++|+++|+++.+++||-
T Consensus 203 I~vIDp~TG~-V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 203 VLEIDPATGT-VVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp EEEECTTTCB-EEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred EEEEeCCCCc-EEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 9999999887 3333332 1235789999998666777663
No 254
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.14 E-value=5.1e-09 Score=89.42 Aligned_cols=233 Identities=15% Similarity=0.161 Sum_probs=153.4
Q ss_pred CCCCeEEEEEcCCeEEEEEeCCCCCCCCceeecc-CCcceEEEEE-e-cCCCCEEEEEc------------------CCC
Q 021121 71 SHDSLLIAAVADGSVKIYDTALPPTANPIRSLHE-HTREVHSADY-N-PTRRDSFITSS------------------WDD 129 (317)
Q Consensus 71 ~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~-~~~~v~~~~~-~-~~~~~~l~~~~------------------~dg 129 (317)
||..++++...+++|.+.|++.. +....+.- .......+++ . |++. ++++++ .++
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~---~~~~ii~ip~g~~phg~~~~~~p~~~-~v~~~~~~~~p~~~dg~~l~~~~~~~~ 175 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVM---KCDAILEIPNAKGIHGLRPQKWPRSN-YVFCNGEDETPLVNDGTNMEDVANYVN 175 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTT---EEEEEEECSSCCSEEEEEECCSSBCS-EEEEEECSCEESSCSSSSTTCGGGEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCc---eEeeEEeCCCCCCCcceeeeecCCCc-EEEEecccccccCCCCcccccccccCc
Confidence 67544555555678999999876 44442221 2345778887 4 8888 666663 356
Q ss_pred EEEEEEcCCCceeEEeeccccceEEEEEecCCCCeEEEEeCCC-------------------------------------
Q 021121 130 TVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDC------------------------------------- 172 (317)
Q Consensus 130 ~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg------------------------------------- 172 (317)
.+.+.|.++.+...++.-.. ....++++|+ ++++++++.+.
T Consensus 176 ~vtvID~~t~~v~~qI~Vgg-~pd~~~~spd-Gk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i 253 (595)
T 1fwx_A 176 VFTAVDADKWEVAWQVLVSG-NLDNCDADYE-GKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQEL 253 (595)
T ss_dssp EEEEEETTTTEEEEEEEESS-CCCCEEECSS-SSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEE
T ss_pred eEEEEECCCCeEEEEEEeCC-CccceEECCC-CCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEE
Confidence 89999999988888776433 4677889998 66666666432
Q ss_pred -eEEEEeCCC--CCc-eeeeccCccceEEEEecCCCCcEEEEE-ecCCcEEEEEccCCCc----------cEEEEecCCC
Q 021121 173 -TLRIWDVRE--MGS-TMIIPAHEFEILACDWNKYDDCLIASA-SVDKSIKIWDVRNYRV----------PIAVLNGHGY 237 (317)
Q Consensus 173 -~i~i~d~~~--~~~-~~~~~~~~~~v~~i~~~~~~~~~l~~~-~~d~~i~v~d~~~~~~----------~~~~~~~~~~ 237 (317)
.|.+.|.++ ++. +..+.. .....++.++| ++++++++ ..+.+|.++|+.+.+. .+.....-..
T Consensus 254 ~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sP-DGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~ 331 (595)
T 1fwx_A 254 NGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAP-DKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGL 331 (595)
T ss_dssp TTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECT-TSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCS
T ss_pred CcEEEEeCcccCCceeEEEEec-CCCceEEEEcC-CCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCC
Confidence 367777776 444 344442 23467899999 78765554 4678999999986421 1222222345
Q ss_pred ceeEEEecCCCCeeEEeeecCCeEEEEecccc---------cceeeeeecccce-----eEeEEEEeccCCeEEEeec--
Q 021121 238 AVRKVKFSPHRRNLLASCSYDMTVCLWDFMVE---------DALVGRYDHHTEF-----AVGVDMSVLVEGLLASTGW-- 301 (317)
Q Consensus 238 ~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~---------~~~~~~~~~~~~~-----v~~~~~~~~~~~~l~s~~~-- 301 (317)
....++|+|+| +...+.-.|+.|.+||+.+. .+.+..+..|..+ -.++.++|| +++|++...
T Consensus 332 gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~D-Gk~l~~~Nk~s 409 (595)
T 1fwx_A 332 GPLHTAFDGRG-NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDAT-NDWLVCLSKFS 409 (595)
T ss_dssp CEEEEEECTTS-EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCC-SSEEEEEESCC
T ss_pred CcceEEECCCC-eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCC-CCEEEEcCCCC
Confidence 67899999999 67777888999999999872 2355555555332 234466888 777777652
Q ss_pred -CCcE----------EEEecCCC
Q 021121 302 -DELV----------YVWQQGMD 313 (317)
Q Consensus 302 -dg~i----------~~w~~~~~ 313 (317)
|+.+ .++|+..+
T Consensus 410 kdr~~~~gp~~~~~~ql~dis~~ 432 (595)
T 1fwx_A 410 KDRFLNVGPLKPENDQLIDISGD 432 (595)
T ss_dssp TTSSCCCCSSCCEEEEEEECSSS
T ss_pred ccccccCCCCCCCcceEEEcCCC
Confidence 4431 77887543
No 255
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.14 E-value=5.5e-07 Score=72.46 Aligned_cols=228 Identities=9% Similarity=-0.008 Sum_probs=142.8
Q ss_pred CceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEe
Q 021121 36 NGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYN 115 (317)
Q Consensus 36 ~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 115 (317)
...|+.++++........+. ........++|.+.++.+..+-...+.|..+++..... ........-.....+++.
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~--~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~--~~~~~~~~l~~p~glavd 87 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVV--GGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTES--VQNVVVSGLLSPDGLACD 87 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEE--EEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSC--CCEEEEECCSCCCEEEEE
T ss_pred cCeEEEEECCCCceEEEEEe--cCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCc--eEEEEcCCCCCccEEEEE
Confidence 34899999987642122111 22235678999987655666666678899998765411 111222223456678888
Q ss_pred cCCCCEEEEEcCCCEEEEEEcCCCceeEEeeccccceEEEEEecCCCCeEEEEe-CCCeEEEEeCCCCCceeeeccCccc
Q 021121 116 PTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSAS-GDCTLRIWDVREMGSTMIIPAHEFE 194 (317)
Q Consensus 116 ~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~ 194 (317)
+.+..++++-...+.|.+++++.................+++.|.++.++.+-. ..+.|...++............-..
T Consensus 88 ~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~ 167 (318)
T 3sov_A 88 WLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYW 167 (318)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSC
T ss_pred cCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCC
Confidence 765546666677889999998754433333334456899999997455555542 3578999988643332222222345
Q ss_pred eEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEeccccc
Q 021121 195 ILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVED 270 (317)
Q Consensus 195 v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~ 270 (317)
.+.++++|..+.++++-...+.|..+|+..... .............+++.. ..++.+-...+.|..++..+++
T Consensus 168 Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~-~~~~~~~~~~P~glav~~--~~lywtd~~~~~V~~~~~~~G~ 240 (318)
T 3sov_A 168 PNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNR-QAVVKGSLPHPFALTLFE--DILYWTDWSTHSILACNKYTGE 240 (318)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSCCSCEEEEEEET--TEEEEEETTTTEEEEEETTTCC
T ss_pred ccEEEEeccCCEEEEEECCCCEEEEEcCCCCce-EEEecCCCCCceEEEEeC--CEEEEEecCCCeEEEEECCCCC
Confidence 689999985566666666678899999875332 223332334556777753 3366776677889999986665
No 256
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.13 E-value=6.3e-08 Score=73.62 Aligned_cols=191 Identities=12% Similarity=0.069 Sum_probs=126.6
Q ss_pred eeeeecCC--CCeeEEEecCCCCCeEEEEEcC--CeEEEEEeCCCCCCCCceeeccCCc-ceEEEEEecCCCCEEEEEcC
Q 021121 53 ELVAFDTA--DGVYDLAWSESHDSLLIAAVAD--GSVKIYDTALPPTANPIRSLHEHTR-EVHSADYNPTRRDSFITSSW 127 (317)
Q Consensus 53 ~~~~~~~~--~~v~~~~~~~~~~~~l~~~~~d--g~i~v~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~l~~~~~ 127 (317)
.+..+.|. .-...+.|++ + .+..+.+.. ..|+.+|+.++ +.+....-... .-..++.. +..+....-.
T Consensus 11 v~~~~phd~~~ftqGL~~~~-~-~LyestG~~g~S~v~~vD~~tg---kv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~ 83 (243)
T 3mbr_X 11 VVKRYPHDTTAFTEGLFYLR-G-HLYESTGETGRSSVRKVDLETG---RILQRAEVPPPYFGAGIVAW--RDRLIQLTWR 83 (243)
T ss_dssp EEEEEECCTTCCEEEEEEET-T-EEEEEECCTTSCEEEEEETTTC---CEEEEEECCTTCCEEEEEEE--TTEEEEEESS
T ss_pred EEEEcCCCCccccccEEEEC-C-EEEEECCCCCCceEEEEECCCC---CEEEEEeCCCCcceeEEEEe--CCEEEEEEee
Confidence 34444554 3466899986 3 455555554 48999999877 45444432221 11234444 3435666677
Q ss_pred CCEEEEEEcCCCceeEEeeccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeeccCc-----cceEEEEecC
Q 021121 128 DDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHE-----FEILACDWNK 202 (317)
Q Consensus 128 dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-----~~v~~i~~~~ 202 (317)
++.+.++|.++.+.+.++.... .-..++ ++ +..|+.+..++.|.++|..+.+.+..+.... ..++.+.+.
T Consensus 84 ~~~v~v~D~~tl~~~~ti~~~~-~Gwglt--~d-g~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~- 158 (243)
T 3mbr_X 84 NHEGFVYDLATLTPRARFRYPG-EGWALT--SD-DSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV- 158 (243)
T ss_dssp SSEEEEEETTTTEEEEEEECSS-CCCEEE--EC-SSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-
T ss_pred CCEEEEEECCcCcEEEEEeCCC-CceEEe--eC-CCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-
Confidence 8999999999999999887543 334554 45 4444455568899999999998887775422 235667765
Q ss_pred CCCcEEEEEecCCcEEEEEccCCCccEEEEec-------------CCCceeEEEecCCCCeeEEeeec
Q 021121 203 YDDCLIASASVDKSIKIWDVRNYRVPIAVLNG-------------HGYAVRKVKFSPHRRNLLASCSY 257 (317)
Q Consensus 203 ~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~~l~~~~~ 257 (317)
++.+++..-.+..|.+.|.++++. +..+.. .....+.|+++|+++.++++|-.
T Consensus 159 -~G~lyanvw~s~~I~vIDp~tG~V-~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~ 224 (243)
T 3mbr_X 159 -NGELLANVWLTSRIARIDPASGKV-VAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKR 224 (243)
T ss_dssp -TTEEEEEETTTTEEEEECTTTCBE-EEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETT
T ss_pred -CCEEEEEECCCCeEEEEECCCCCE-EEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCC
Confidence 677776666788999999998774 444331 12356899999998877777754
No 257
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.13 E-value=1.3e-06 Score=79.67 Aligned_cols=271 Identities=6% Similarity=0.038 Sum_probs=167.1
Q ss_pred eeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeEEEEE
Q 021121 10 GYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYD 89 (317)
Q Consensus 10 v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~ 89 (317)
|.++...+ ++.+.+++. ++.|..|+..... +...........|.++...+++ .+..|+.++-+..|+
T Consensus 175 i~~i~~d~--~g~lwigt~-------~~Gl~~~~~~~~~--~~~~~~~~~~~~i~~i~~d~~g--~lwigt~~~Gl~~~~ 241 (795)
T 4a2l_A 175 IASTLYRQ--GDQIYIGTS-------TDGLYTYSITQKT--FEKVIPILGTKQIQAILQQSPT--RIWVATEGAGLFLIN 241 (795)
T ss_dssp CEEEEEEE--TTEEEEEES-------SSCEEEEETTTCC--EEECC----CCCEEEEEEEETT--EEEEEEBSSCEEEEE
T ss_pred eEEEEECC--CCCEEEEEC-------CCCEEEEeCCCCe--EEEecCCCCCCeeEEEEEcCCC--CEEEEECCCCeEEEe
Confidence 77777777 677777664 3468888876543 2222111234568888887776 455666554488888
Q ss_pred eCCCCCCCCceeec--------cCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeec-------cccceEE
Q 021121 90 TALPPTANPIRSLH--------EHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKE-------HAYCVYN 154 (317)
Q Consensus 90 ~~~~~~~~~~~~~~--------~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~-------~~~~v~~ 154 (317)
.... . ...+. -....|.++...+++. +..|+.+ -|.+||..+++....... ....|.+
T Consensus 242 ~~~~---~-~~~~~~~~~~~~~l~~~~i~~i~~d~~g~--lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~ 314 (795)
T 4a2l_A 242 PKTK---E-IKNYLHSPSNPKSISSNYIRSLAMDSQNR--LWIGTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRS 314 (795)
T ss_dssp TTTT---E-EEEECCCTTCTTSCSCSBEEEEEECTTSC--EEEEESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEE
T ss_pred CCCC---e-EEEeecCCCCccccCCCeEEEEEEcCCCC--EEEEeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEE
Confidence 6543 1 11111 1235699999888876 4555555 588899876654332211 2356999
Q ss_pred EEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeec------cCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCcc
Q 021121 155 ATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIP------AHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVP 228 (317)
Q Consensus 155 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~------~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~ 228 (317)
+...++ +. +..|+.++-|..|+..+........ .....|.++...+ +++ |..|+.++-|..||..+..
T Consensus 315 i~~D~~-g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~-~g~-lWiGt~~~Gl~~~~~~~~~-- 388 (795)
T 4a2l_A 315 IFMDSQ-GG-MWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDK-DKN-LWIGTNDGGLNLYNPITQR-- 388 (795)
T ss_dssp EEECTT-SC-EEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECT-TSC-EEEEESSSCEEEECTTTCC--
T ss_pred EEEeCC-cC-EEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECC-CCC-EEEEECCCCeEEEcCCCCc--
Confidence 988876 55 4467777789999876543222111 1234588998887 665 4457777779999987654
Q ss_pred EEEEe---------cCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeee-----cccceeEeEEEEeccCC
Q 021121 229 IAVLN---------GHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYD-----HHTEFAVGVDMSVLVEG 294 (317)
Q Consensus 229 ~~~~~---------~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~ 294 (317)
...+. .....|.++...+++. +|..|+.++-|..+|..+++ . ..+. .....|.++...++ +.
T Consensus 389 ~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-~lWigt~~~Gl~~~d~~~~~-~-~~~~~~~~~l~~~~v~~i~~d~~-g~ 464 (795)
T 4a2l_A 389 FTSYTLQEDESARGIGSNNIKAVYVDEKKS-LVYIGTHAGGLSILHRNSGQ-V-ENFNQRNSQLVNENVYAILPDGE-GN 464 (795)
T ss_dssp EEEECCC------CCSCSCEEEEEEETTTT-EEEEEETTTEEEEEETTTCC-E-EEECTTTSCCSCSCEEEEEECSS-SC
T ss_pred EEEEecCCCCcccCCCCccEEEEEEcCCCC-EEEEEeCcCceeEEeCCCCc-E-EEeecCCCCcCCCeeEEEEECCC-CC
Confidence 22221 1235788999888886 46677777789999987764 2 2222 12356888887765 44
Q ss_pred eEEEeecCCcEEEEecCC
Q 021121 295 LLASTGWDELVYVWQQGM 312 (317)
Q Consensus 295 ~l~s~~~dg~i~~w~~~~ 312 (317)
|..|+.+| |.+|+...
T Consensus 465 -lwigt~~G-l~~~~~~~ 480 (795)
T 4a2l_A 465 -LWLGTLSA-LVRFNPEQ 480 (795)
T ss_dssp -EEEEESSC-EEEEETTT
T ss_pred -EEEEecCc-eeEEeCCC
Confidence 44444444 77787654
No 258
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.13 E-value=2.1e-07 Score=74.61 Aligned_cols=233 Identities=9% Similarity=-0.022 Sum_probs=134.7
Q ss_pred eeeeecCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcC-C-CE
Q 021121 53 ELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSW-D-DT 130 (317)
Q Consensus 53 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d-g~ 130 (317)
.+..+........++|.+++ .++++-..++.|..||.... ...... .......+++.++++ ++++... + ..
T Consensus 24 ~~~~~p~~~~pegia~~~~g-~lyv~d~~~~~I~~~d~~g~----~~~~~~-~~~~p~gia~~~dG~-l~vad~~~~~~~ 96 (306)
T 2p4o_A 24 IITSFPVNTFLENLASAPDG-TIFVTNHEVGEIVSITPDGN----QQIHAT-VEGKVSGLAFTSNGD-LVATGWNADSIP 96 (306)
T ss_dssp EEEEECTTCCEEEEEECTTS-CEEEEETTTTEEEEECTTCC----EEEEEE-CSSEEEEEEECTTSC-EEEEEECTTSCE
T ss_pred EeEeCCCCCCcceEEECCCC-CEEEEeCCCCeEEEECCCCc----eEEEEe-CCCCceeEEEcCCCc-EEEEeccCCcce
Confidence 34444444567889999987 46666657888988886532 222222 235688999999987 5555433 2 35
Q ss_pred EEEEEcCCCceeEEeec-cccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCc-eeee---------ccCccceEEEE
Q 021121 131 VKLWTVDRPTSVRTFKE-HAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGS-TMII---------PAHEFEILACD 199 (317)
Q Consensus 131 v~iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~-~~~~---------~~~~~~v~~i~ 199 (317)
|..+|..+++....... .......++..+. +..+++-..++.|+.+|..+++. +... ...-...+.+
T Consensus 97 v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~-~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi- 174 (306)
T 2p4o_A 97 VVSLVKSDGTVETLLTLPDAIFLNGITPLSD-TQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL- 174 (306)
T ss_dssp EEEEECTTSCEEEEEECTTCSCEEEEEESSS-SEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE-
T ss_pred EEEEcCCCCeEEEEEeCCCccccCcccccCC-CcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc-
Confidence 77778777765433221 1222345555443 44455544688999999865421 1100 0111223455
Q ss_pred ecCCCCc-EEEEEecCCcEEEEEccC-CCc-cEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccce-eee
Q 021121 200 WNKYDDC-LIASASVDKSIKIWDVRN-YRV-PIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDAL-VGR 275 (317)
Q Consensus 200 ~~~~~~~-~l~~~~~d~~i~v~d~~~-~~~-~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~-~~~ 275 (317)
+| +++ ++++-...+.|..||+.. ++. ....+.. ......++++++|. ++++....+.|.++|.. ++.. +..
T Consensus 175 -s~-dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~-l~va~~~~~~V~~~~~~-G~~~~~~~ 249 (306)
T 2p4o_A 175 -KR-FGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGN-LYGATHIYNSVVRIAPD-RSTTIIAQ 249 (306)
T ss_dssp -EE-ETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCC-EEEECBTTCCEEEECTT-CCEEEEEC
T ss_pred -Cc-CCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCC-EEEEeCCCCeEEEECCC-CCEEEEee
Confidence 66 554 556666678999999874 221 1112211 13457899999997 66666667889999975 4311 222
Q ss_pred eecccceeEeEEEE---eccCCeEEEe
Q 021121 276 YDHHTEFAVGVDMS---VLVEGLLAST 299 (317)
Q Consensus 276 ~~~~~~~v~~~~~~---~~~~~~l~s~ 299 (317)
........++++|. |+++.++++.
T Consensus 250 ~~~~~~~p~~~a~~g~~~d~~~LyVt~ 276 (306)
T 2p4o_A 250 AEQGVIGSTAVAFGQTEGDCTAIYVVT 276 (306)
T ss_dssp GGGTCTTEEEEEECCSTTTTTEEEEEE
T ss_pred cccccCCceEEEEecccCCCCEEEEEC
Confidence 22222457899998 7733344443
No 259
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.13 E-value=1.4e-06 Score=79.29 Aligned_cols=272 Identities=8% Similarity=0.016 Sum_probs=169.2
Q ss_pred cceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeee------cCCCCeeEEEecCCCCCeEEEEEc
Q 021121 8 FNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAF------DTADGVYDLAWSESHDSLLIAAVA 81 (317)
Q Consensus 8 ~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~l~~~~~ 81 (317)
..|+++...+ ++.+.+++. + -|.+|+..... +...... -....|.++...++| .|..|+.
T Consensus 263 ~~i~~i~~d~--~g~lWigt~-------~-Gl~~~~~~~~~--~~~~~~~~~~~~~l~~~~i~~i~~D~~g--~lWigt~ 328 (795)
T 4a2l_A 263 NYIRSLAMDS--QNRLWIGTF-------N-DLNIYHEGTDS--FASYSSNPVENGSLSQRSVRSIFMDSQG--GMWLGTY 328 (795)
T ss_dssp SBEEEEEECT--TSCEEEEES-------S-CEEEEETTTTE--EEEECCCTTSTTSCSSSCEEEEEECTTS--CEEEEES
T ss_pred CeEEEEEEcC--CCCEEEEeC-------C-hhheEcCCCCe--EEEEecCCCCCCCCCCCcEEEEEEeCCc--CEEEEEC
Confidence 4578888777 677777764 4 57788865442 2221110 123569999988887 4677877
Q ss_pred CCeEEEEEeCCCCCCCCceeec-------cCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeec-------
Q 021121 82 DGSVKIYDTALPPTANPIRSLH-------EHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKE------- 147 (317)
Q Consensus 82 dg~i~v~~~~~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~------- 147 (317)
++-|..|+.... ....+. -....|.++...+++. |-.|+.++-|..|+..+++.......
T Consensus 329 ~~Gl~~~~~~~~----~~~~~~~~~~~~~l~~~~V~~i~~d~~g~--lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~ 402 (795)
T 4a2l_A 329 FGGLNYYHPIRN----RFKNIRNIPYKNSLSDNVVSCIVEDKDKN--LWIGTNDGGLNLYNPITQRFTSYTLQEDESARG 402 (795)
T ss_dssp SSCEEEECGGGG----SSEEECCCTTSSSCSCSSEEEEEECTTSC--EEEEESSSCEEEECTTTCCEEEECCC------C
T ss_pred CCCeEEeCCCcc----cceEEcCCCCCCCCCCCeeEEEEECCCCC--EEEEECCCCeEEEcCCCCcEEEEecCCCCcccC
Confidence 777888886543 111111 1245689998888775 66677777899999887654332211
Q ss_pred -cccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeec----cCccceEEEEecCCCCcEEEEEecCCcEEEEEc
Q 021121 148 -HAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIP----AHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222 (317)
Q Consensus 148 -~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~----~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~ 222 (317)
....|.++...++ +.+|..|+.++-|..||.++++...... .....|.++...+ ++.+.+. +. +.+.+||.
T Consensus 403 l~~~~v~~i~~d~~-g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~lwig-t~-~Gl~~~~~ 478 (795)
T 4a2l_A 403 IGSNNIKAVYVDEK-KSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDG-EGNLWLG-TL-SALVRFNP 478 (795)
T ss_dssp CSCSCEEEEEEETT-TTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECS-SSCEEEE-ES-SCEEEEET
T ss_pred CCCccEEEEEEcCC-CCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECC-CCCEEEE-ec-CceeEEeC
Confidence 2356889988876 6646677877789999988765432221 1245688998887 6765554 44 45889998
Q ss_pred cCCCccEEEEec-------CCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeee-----eecccceeEeEEEEe
Q 021121 223 RNYRVPIAVLNG-------HGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGR-----YDHHTEFAVGVDMSV 290 (317)
Q Consensus 223 ~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~-----~~~~~~~v~~~~~~~ 290 (317)
.+.+ ...+.. ....|.++...+++. |..|+. +-+..||..+.+. ... .......|.++...+
T Consensus 479 ~~~~--~~~~~~~~~~~~~~~~~i~~i~~d~~g~--lWigt~-~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~ 552 (795)
T 4a2l_A 479 EQRS--FTTIEKEKDGTPVVSKQITTLFRDSHKR--LWIGGE-EGLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEAS 552 (795)
T ss_dssp TTTE--EEECCBCTTCCBCCCCCEEEEEECTTCC--EEEEES-SCEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECT
T ss_pred CCCe--EEEccccccccccCCceEEEEEECCCCC--EEEEeC-CceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECC
Confidence 7643 222221 235789999998887 333444 4588888776542 100 012334688888777
Q ss_pred ccCCeEEEeecCCcEEEEecCC
Q 021121 291 LVEGLLASTGWDELVYVWQQGM 312 (317)
Q Consensus 291 ~~~~~l~s~~~dg~i~~w~~~~ 312 (317)
+ +.+.+ ++..| |..|+...
T Consensus 553 ~-g~lWi-gT~~G-l~~~d~~~ 571 (795)
T 4a2l_A 553 N-GIIWV-GTREG-FYCFNEKD 571 (795)
T ss_dssp T-SCEEE-EESSC-EEEEETTT
T ss_pred C-CCEEE-EeCCC-ceeECCCC
Confidence 6 44444 44444 67777543
No 260
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.12 E-value=1.1e-07 Score=84.71 Aligned_cols=228 Identities=12% Similarity=0.091 Sum_probs=141.7
Q ss_pred CeEEEEEcCCeEEEEEeCCCCCCCCceeeccCC----cceEE-EEEecCCCCEEEEEcC------CCEEEEEEcCCCcee
Q 021121 74 SLLIAAVADGSVKIYDTALPPTANPIRSLHEHT----REVHS-ADYNPTRRDSFITSSW------DDTVKLWTVDRPTSV 142 (317)
Q Consensus 74 ~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~----~~v~~-~~~~~~~~~~l~~~~~------dg~v~iwd~~~~~~~ 142 (317)
..+++++.++.|..+|..++ +.+....... ..+.+ .... ++ .++++.. +|.|..+|.++++.+
T Consensus 118 ~~v~v~~~dg~l~alD~~tG---~~~W~~~~~~~~~~~~~~~~P~v~-~~--~v~vg~~~~~~~~~g~v~a~D~~tG~~~ 191 (668)
T 1kv9_A 118 DKVYVGTLDGRLIALDAKTG---KAIWSQQTTDPAKPYSITGAPRVV-KG--KVIIGNGGAEYGVRGFVSAYDADTGKLA 191 (668)
T ss_dssp TEEEEECTTSEEEEEETTTC---CEEEEEECSCTTSSCBCCSCCEEE-TT--EEEECCBCTTTCCBCEEEEEETTTCCEE
T ss_pred CEEEEEcCCCEEEEEECCCC---CEeeeeccCCCCCcceecCCCEEE-CC--EEEEeCCCCCcCCCCEEEEEECCCCcEE
Confidence 37788888999999998877 4443333210 11111 0111 23 4555543 589999999999988
Q ss_pred EEeeccc---c----------------------------ceEEEEEecCCCCeEEEEeCCC-------------------
Q 021121 143 RTFKEHA---Y----------------------------CVYNATWNPRHSDVFCSASGDC------------------- 172 (317)
Q Consensus 143 ~~~~~~~---~----------------------------~v~~~~~~~~~~~~l~~~~~dg------------------- 172 (317)
..+.... . ....+++.|. ..+++.++.++
T Consensus 192 W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~-~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~ 270 (668)
T 1kv9_A 192 WRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPE-LDLLYVGTGNGSPWNREVRSPGGGDNLYLS 270 (668)
T ss_dssp EEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETT-TTEEEEECCCEESSCHHHHSTTCCCCTTTT
T ss_pred EEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCC-CCEEEEeCCCCCccccCCCCCCCCCceeee
Confidence 8775210 0 0124678887 67777887766
Q ss_pred eEEEEeCCCCCceeeecc--Cc-------cceEEEEecCCCCc---EEEEEecCCcEEEEEccCCCccEEEEecCC----
Q 021121 173 TLRIWDVREMGSTMIIPA--HE-------FEILACDWNKYDDC---LIASASVDKSIKIWDVRNYRVPIAVLNGHG---- 236 (317)
Q Consensus 173 ~i~i~d~~~~~~~~~~~~--~~-------~~v~~i~~~~~~~~---~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~---- 236 (317)
.|.-+|.++++.+..++. |. .+.....+.. +++ .++.++.+|.++++|.++++. +.......
T Consensus 271 ~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~-~G~~~~~v~~~~~~G~l~~lD~~tG~~-l~~~~~~~~~w~ 348 (668)
T 1kv9_A 271 SILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNI-DGKPRKVLMQAPKNGFFYVLDRTNGKL-ISAEKFGKVTWA 348 (668)
T ss_dssp EEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEE-TTEEEEEEEECCTTSEEEEEETTTCCE-EEEEESSCCCSE
T ss_pred eEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEecc-CCcEEEEEEEECCCCEEEEEECCCCCE-eccccccccccc
Confidence 399999999998877653 21 2222222222 443 688899999999999998874 32211100
Q ss_pred --------Cc------------------------eeEEEecCCCCeeEEee-----------------------------
Q 021121 237 --------YA------------------------VRKVKFSPHRRNLLASC----------------------------- 255 (317)
Q Consensus 237 --------~~------------------------v~~~~~~~~~~~~l~~~----------------------------- 255 (317)
.+ -..++++|+.. +++..
T Consensus 349 ~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g-~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 427 (668)
T 1kv9_A 349 EKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTG-LVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFAD 427 (668)
T ss_dssp EEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTT-EEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGG
T ss_pred cccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCC-EEEEeccccceEeeeeccccccccccccCccccc
Confidence 00 01267777766 33321
Q ss_pred -------ecCCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEeecCCcEEEEecCCCC
Q 021121 256 -------SYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGMDP 314 (317)
Q Consensus 256 -------~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~ 314 (317)
..+|.|..||+.+++..- .... ..+.....+... +.+++.++.||.++.||..+.+
T Consensus 428 ~~~~p~~~~~g~l~A~D~~tG~~~W-~~~~-~~~~~~~~~~t~-gg~vf~g~~dg~l~a~d~~tG~ 490 (668)
T 1kv9_A 428 ATDVPAAVVSGALLAWDPVKQKAAW-KVPY-PTHWNGGTLSTA-GNLVFQGTAAGQMHAYSADKGE 490 (668)
T ss_dssp CCCCCGGGCEEEEEEEETTTTEEEE-EEEE-SSSCCCCEEEET-TTEEEEECTTSEEEEEETTTCC
T ss_pred cCCCCCCCccceEEEEeCCCCcEEE-EccC-CCCCcCceeEeC-CCEEEEECCcccchhhhhhcCh
Confidence 134889999999987443 3222 223444455555 6788889999999999988754
No 261
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.09 E-value=1.5e-07 Score=83.74 Aligned_cols=183 Identities=11% Similarity=0.058 Sum_probs=111.6
Q ss_pred EEEEecCCCCEEEEEcCCC-------------------EEEEEEcCCCceeEEeecc--c-------cceEEEEEecCCC
Q 021121 111 SADYNPTRRDSFITSSWDD-------------------TVKLWTVDRPTSVRTFKEH--A-------YCVYNATWNPRHS 162 (317)
Q Consensus 111 ~~~~~~~~~~~l~~~~~dg-------------------~v~iwd~~~~~~~~~~~~~--~-------~~v~~~~~~~~~~ 162 (317)
.+++.|+.. +++.+..++ .|..+|.++++.+..++.. . .++....+..+ +
T Consensus 234 ~~a~d~~~~-~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~-G 311 (668)
T 1kv9_A 234 SMAYDPELD-LLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNID-G 311 (668)
T ss_dssp CEEEETTTT-EEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEET-T
T ss_pred ceEEcCCCC-EEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccC-C
Confidence 467888776 788887766 4999999999998887642 1 22332333334 4
Q ss_pred C---eEEEEeCCCeEEEEeCCCCCceeeeccCc------------cce------------------------EEEEecCC
Q 021121 163 D---VFCSASGDCTLRIWDVREMGSTMIIPAHE------------FEI------------------------LACDWNKY 203 (317)
Q Consensus 163 ~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~~------------~~v------------------------~~i~~~~~ 203 (317)
+ .++.++.+|.++++|.++++.+...+... .++ ..++++|
T Consensus 312 ~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp- 390 (668)
T 1kv9_A 312 KPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNP- 390 (668)
T ss_dssp EEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEET-
T ss_pred cEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECC-
Confidence 3 68889999999999999998774332111 000 1256777
Q ss_pred CCcEEEEE------------------------------------ecCCcEEEEEccCCCccEEEEecCCCceeEEEecCC
Q 021121 204 DDCLIASA------------------------------------SVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPH 247 (317)
Q Consensus 204 ~~~~l~~~------------------------------------~~d~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~~ 247 (317)
+..++... ..+|.|..||+.+++. +.....+ .+.....+...
T Consensus 391 ~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~-~W~~~~~-~~~~~~~~~t~ 468 (668)
T 1kv9_A 391 GTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKA-AWKVPYP-THWNGGTLSTA 468 (668)
T ss_dssp TTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEE-EEEEEES-SSCCCCEEEET
T ss_pred CCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcE-EEEccCC-CCCcCceeEeC
Confidence 44443331 1237899999998775 4343322 23333344445
Q ss_pred CCeeEEeeecCCeEEEEecccccceeeeeecccc-eeEeEEEEeccCCeEEEee
Q 021121 248 RRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTE-FAVGVDMSVLVEGLLASTG 300 (317)
Q Consensus 248 ~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~l~s~~ 300 (317)
+. +++.++.|+.+++||.++++.+ ..+..... .-.-+.+..++..+++.++
T Consensus 469 gg-~vf~g~~dg~l~a~d~~tG~~l-~~~~~~~~~~~~p~~~~~~G~~yva~~~ 520 (668)
T 1kv9_A 469 GN-LVFQGTAAGQMHAYSADKGEAL-WQFEAQSGIVAAPMTFELAGRQYVAIMA 520 (668)
T ss_dssp TT-EEEEECTTSEEEEEETTTCCEE-EEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred CC-EEEEECCcccchhhhhhcChhh-eEecCCCCcccCceEEEECCEEEEEEEe
Confidence 65 6888899999999999998744 34433221 1123444455333555443
No 262
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.07 E-value=2.2e-07 Score=70.61 Aligned_cols=188 Identities=12% Similarity=0.099 Sum_probs=121.4
Q ss_pred eecCcc--eeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEc
Q 021121 4 FKTPFN--GYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVA 81 (317)
Q Consensus 4 ~~~~~~--v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 81 (317)
|.|+.. ...+.|++ +.+..+++.. +.+.|+.+|+.+++. +....-..........+.++.+......
T Consensus 15 ~phd~~~ftqGL~~~~---~~LyestG~~----g~S~v~~vD~~tgkv----~~~~~l~~~~fgeGi~~~~~~ly~ltw~ 83 (243)
T 3mbr_X 15 YPHDTTAFTEGLFYLR---GHLYESTGET----GRSSVRKVDLETGRI----LQRAEVPPPYFGAGIVAWRDRLIQLTWR 83 (243)
T ss_dssp EECCTTCCEEEEEEET---TEEEEEECCT----TSCEEEEEETTTCCE----EEEEECCTTCCEEEEEEETTEEEEEESS
T ss_pred cCCCCccccccEEEEC---CEEEEECCCC----CCceEEEEECCCCCE----EEEEeCCCCcceeEEEEeCCEEEEEEee
Confidence 444433 34788987 5666766641 245899999988762 2222333344333333334456666667
Q ss_pred CCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeeccc-----cceEEEE
Q 021121 82 DGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHA-----YCVYNAT 156 (317)
Q Consensus 82 dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~-----~~v~~~~ 156 (317)
++.+.+||.++. +.+..+..... -..++ +++. .|+.+..++.|.++|.++.+.+..+.-.. ..++.+.
T Consensus 84 ~~~v~v~D~~tl---~~~~ti~~~~~-Gwglt--~dg~-~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe 156 (243)
T 3mbr_X 84 NHEGFVYDLATL---TPRARFRYPGE-GWALT--SDDS-HLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELE 156 (243)
T ss_dssp SSEEEEEETTTT---EEEEEEECSSC-CCEEE--ECSS-CEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEE
T ss_pred CCEEEEEECCcC---cEEEEEeCCCC-ceEEe--eCCC-EEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeE
Confidence 899999998765 56655553222 23444 5566 45555568999999999998888776422 3456777
Q ss_pred EecCCCCeEEEEeCCCeEEEEeCCCCCceeeeccC-------------ccceEEEEecCCCCcEEEEE
Q 021121 157 WNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAH-------------EFEILACDWNKYDDCLIASA 211 (317)
Q Consensus 157 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-------------~~~v~~i~~~~~~~~~l~~~ 211 (317)
|. + +.+++..-.+..|.+.|.++++.+..+... ..-.+.|+++|...+++++|
T Consensus 157 ~~-~-G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 157 WV-N-GELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp EE-T-TEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred Ee-C-CEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 76 3 666666657889999999999887766411 12468899999555555555
No 263
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.05 E-value=2.8e-07 Score=73.96 Aligned_cols=227 Identities=11% Similarity=0.055 Sum_probs=132.0
Q ss_pred cceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCC--eE
Q 021121 8 FNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADG--SV 85 (317)
Q Consensus 8 ~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg--~i 85 (317)
.....++|+| ++.+.++... +++|..||.+.. .. ...........+++.+++. ++++..... .|
T Consensus 32 ~~pegia~~~--~g~lyv~d~~------~~~I~~~d~~g~---~~--~~~~~~~~p~gia~~~dG~-l~vad~~~~~~~v 97 (306)
T 2p4o_A 32 TFLENLASAP--DGTIFVTNHE------VGEIVSITPDGN---QQ--IHATVEGKVSGLAFTSNGD-LVATGWNADSIPV 97 (306)
T ss_dssp CCEEEEEECT--TSCEEEEETT------TTEEEEECTTCC---EE--EEEECSSEEEEEEECTTSC-EEEEEECTTSCEE
T ss_pred CCcceEEECC--CCCEEEEeCC------CCeEEEECCCCc---eE--EEEeCCCCceeEEEcCCCc-EEEEeccCCcceE
Confidence 5567899999 5667666543 788988887642 22 2223445788999999984 555543332 35
Q ss_pred EEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCce-eEEee---------ccccceEEE
Q 021121 86 KIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTS-VRTFK---------EHAYCVYNA 155 (317)
Q Consensus 86 ~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~-~~~~~---------~~~~~v~~~ 155 (317)
..++...++ ...+.... .......++..+++. .+++-..++.|.++|..+++. +.... ..-...+.+
T Consensus 98 ~~~d~~~g~-~~~~~~~~-~~~~~~g~~~~~~~~-~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi 174 (306)
T 2p4o_A 98 VSLVKSDGT-VETLLTLP-DAIFLNGITPLSDTQ-YLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL 174 (306)
T ss_dssp EEEECTTSC-EEEEEECT-TCSCEEEEEESSSSE-EEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE
T ss_pred EEEcCCCCe-EEEEEeCC-CccccCcccccCCCc-EEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc
Confidence 556654431 11111111 122234455444443 455555689999999875421 11110 011234555
Q ss_pred EEecCCCCeEEEEeCCCeEEEEeCCC-CCc--eeeeccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCcc-EEE
Q 021121 156 TWNPRHSDVFCSASGDCTLRIWDVRE-MGS--TMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVP-IAV 231 (317)
Q Consensus 156 ~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~--~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~-~~~ 231 (317)
+|+++.++++-...+.|..+|+.. ++. ...+.. ......+++++ +++++++....+.|.++|.. ++.. +..
T Consensus 175 --s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~-dG~l~va~~~~~~V~~~~~~-G~~~~~~~ 249 (306)
T 2p4o_A 175 --KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDV-EGNLYGATHIYNSVVRIAPD-RSTTIIAQ 249 (306)
T ss_dssp --EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBT-TCCEEEECBTTCCEEEECTT-CCEEEEEC
T ss_pred --CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECC-CCCEEEEeCCCCeEEEECCC-CCEEEEee
Confidence 777445666666788999999874 221 111211 12356788998 88888887778899999975 3321 112
Q ss_pred EecCCCceeEEEec---CCCCeeEEeee
Q 021121 232 LNGHGYAVRKVKFS---PHRRNLLASCS 256 (317)
Q Consensus 232 ~~~~~~~v~~~~~~---~~~~~~l~~~~ 256 (317)
....-...++++|. |+++.++++..
T Consensus 250 ~~~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 250 AEQGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp GGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred cccccCCceEEEEecccCCCCEEEEECC
Confidence 22223467899998 88775555544
No 264
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.05 E-value=3.4e-06 Score=70.21 Aligned_cols=228 Identities=9% Similarity=-0.002 Sum_probs=143.3
Q ss_pred eEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCC----ceeEEeecccc
Q 021121 75 LLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRP----TSVRTFKEHAY 150 (317)
Q Consensus 75 ~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~----~~~~~~~~~~~ 150 (317)
+|+.+. ...|+..++... . ...+......+..++|++.+..++.+-...+.|..+++... .....+.....
T Consensus 85 ~ll~~~-~~~I~~i~l~~~---~-~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~ 159 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRS---E-YTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQ 159 (400)
T ss_dssp EEEEEE-TTEEEEECTTSC---S-CEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCS
T ss_pred eeEEec-cceeEEEccCCc---c-eeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCC
Confidence 444443 467888887653 2 22233345678899999876645556567789999998752 22333333445
Q ss_pred ceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEec-CCcEEEEEccCCCccE
Q 021121 151 CVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASV-DKSIKIWDVRNYRVPI 229 (317)
Q Consensus 151 ~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~-d~~i~v~d~~~~~~~~ 229 (317)
.+..+++.+.++++.++-...+.|.+.++........+...-.....++++|..+.++++-.. .+.|...++..... .
T Consensus 160 ~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~-~ 238 (400)
T 3p5b_L 160 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-Y 238 (400)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSC-E
T ss_pred CcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCcc-E
Confidence 678999998657777777778899999987654444444334457899999945555555433 36899998875432 3
Q ss_pred EEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeec--ccceeEeEEEEeccCCeEEEeecCCcEEE
Q 021121 230 AVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDH--HTEFAVGVDMSVLVEGLLASTGWDELVYV 307 (317)
Q Consensus 230 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~s~~~dg~i~~ 307 (317)
......-.....|+++|++..+.++=...+.|..+|+..... ...... .-....++++. ++.++++-...+.|..
T Consensus 239 ~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~-~~~~~~~~~l~~P~gl~v~--~~~lywtd~~~~~V~~ 315 (400)
T 3p5b_L 239 SLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFS 315 (400)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCC-EEEEECSSTTSSEEEEEEE--TTEEEEEESSSCSEEE
T ss_pred EEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCcc-EEEEeCCCCCCCCEEEEEe--CCEEEEecCCCCeEEE
Confidence 333333356789999998876556555678899999865432 112221 12234566663 2556666666778888
Q ss_pred EecC
Q 021121 308 WQQG 311 (317)
Q Consensus 308 w~~~ 311 (317)
++..
T Consensus 316 ~~~~ 319 (400)
T 3p5b_L 316 ANRL 319 (400)
T ss_dssp EESS
T ss_pred EEcC
Confidence 7743
No 265
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.04 E-value=4e-08 Score=87.43 Aligned_cols=278 Identities=7% Similarity=0.017 Sum_probs=144.4
Q ss_pred eEEEEecCCCCeEEEEEecccccc-----cCceEEEEecCCCCCcceeeeeec--CCCCeeEEEecCCCCCeEEEEE-cC
Q 021121 11 YSVKFSPFYESRLAVATAQNFGIL-----GNGRVHVLDLSPAAPALTELVAFD--TADGVYDLAWSESHDSLLIAAV-AD 82 (317)
Q Consensus 11 ~~~~~~p~~~~~~~~~~~~~~~~~-----~~g~i~i~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~-~d 82 (317)
.++++.|. ++++++.++...... ....+.+||...... ..+.... +.....++++.+++ .+++.|+ .+
T Consensus 189 ~~~av~~~-~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w--~~~~~~~~~~~~~~~~~~~~~~g-~lyv~GG~~~ 264 (656)
T 1k3i_A 189 AAAAIEPT-SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIV--SDRTVTVTKHDMFCPGISMDGNG-QIVVTGGNDA 264 (656)
T ss_dssp SEEEEETT-TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCB--CCCEEEECSCCCSSCEEEECTTS-CEEEECSSST
T ss_pred eeEEEEec-CCEEEEEecccccccccCCCCeEEEEEEeCCCCcE--EeCcccCCCCCCccccccCCCCC-CEEEeCCCCC
Confidence 35667763 345555544211000 012588898877652 2232222 22233456777777 5778877 45
Q ss_pred CeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEc-CC-----CEEEEEEcCCCceeEEeeccc-cceE--
Q 021121 83 GSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSS-WD-----DTVKLWTVDRPTSVRTFKEHA-YCVY-- 153 (317)
Q Consensus 83 g~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d-----g~v~iwd~~~~~~~~~~~~~~-~~v~-- 153 (317)
..+.+||..+. ....+..+..... -.+++..++++ +++.|+ .+ ..+.+||..+.+-.. +.... .+..
T Consensus 265 ~~v~~yd~~t~-~W~~~~~~~~~R~-~~s~~~~~dg~-iyv~GG~~~~~~~~~~~e~yd~~t~~W~~-~~~~~~~p~~~~ 340 (656)
T 1k3i_A 265 KKTSLYDSSSD-SWIPGPDMQVARG-YQSSATMSDGR-VFTIGGSWSGGVFEKNGEVYSPSSKTWTS-LPNAKVNPMLTA 340 (656)
T ss_dssp TCEEEEEGGGT-EEEECCCCSSCCS-SCEEEECTTSC-EEEECCCCCSSSCCCCEEEEETTTTEEEE-ETTSCSGGGCCC
T ss_pred CceEEecCcCC-ceeECCCCCcccc-ccceEEecCCe-EEEEeCcccCCcccccceEeCCCCCccee-CCCccccccccc
Confidence 68999998754 2222222222111 23445566777 777777 34 568999998764322 11000 0000
Q ss_pred --EEEEecCCCCeEEEEeCCC---------eEEEEeCCCCCceeeeccCc---------cceEEEEecCCCCcEEEEEec
Q 021121 154 --NATWNPRHSDVFCSASGDC---------TLRIWDVREMGSTMIIPAHE---------FEILACDWNKYDDCLIASASV 213 (317)
Q Consensus 154 --~~~~~~~~~~~l~~~~~dg---------~i~i~d~~~~~~~~~~~~~~---------~~v~~i~~~~~~~~~l~~~~~ 213 (317)
...+..+ +.+++.++.+| .+..||..+..-........ ..-.++.+...++++++.|+.
T Consensus 341 ~~~~~~~~~-~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~ 419 (656)
T 1k3i_A 341 DKQGLYRSD-NHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGS 419 (656)
T ss_dssp CTTGGGTTT-CSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCB
T ss_pred cccceeecC-CceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCC
Confidence 0111123 45555555443 56788887665332222111 122344444447888888885
Q ss_pred CC-----------cEEEEEccCCCccEEEEe---cC-CCceeEEEecCCCCeeEEeeecC-----------CeEEEEecc
Q 021121 214 DK-----------SIKIWDVRNYRVPIAVLN---GH-GYAVRKVKFSPHRRNLLASCSYD-----------MTVCLWDFM 267 (317)
Q Consensus 214 d~-----------~i~v~d~~~~~~~~~~~~---~~-~~~v~~~~~~~~~~~~l~~~~~d-----------~~i~vwd~~ 267 (317)
++ .+.+||..+..- .... .+ ...-.+++..|+++ +++.|+.+ ..+.+||..
T Consensus 420 ~~~~~~~~~~~~~~v~~yd~~~~~W--~~~~~~~mp~~R~~~~~~~l~~g~-i~v~GG~~~~~~~~~~~~~~~v~~ydp~ 496 (656)
T 1k3i_A 420 PDYQDSDATTNAHIITLGEPGTSPN--TVFASNGLYFARTFHTSVVLPDGS-TFITGGQRRGIPFEDSTPVFTPEIYVPE 496 (656)
T ss_dssp SSSSSSBCCCCEEEEECCSTTSCCE--EEECTTCCSSCCBSCEEEECTTSC-EEEECCBSBCCTTCCCSBCCCCEEEEGG
T ss_pred CCCCCCCcCCcceEEEcCCCCCCCe--eEEccCCCCCCcccCCeEECCCCC-EEEECCcccCcCcCCCCcccceEEEcCC
Confidence 43 577888776442 2221 11 12223556678888 78888754 468999987
Q ss_pred cccc-eeeeeecccceeEeEEEEeccCCeEEEeec
Q 021121 268 VEDA-LVGRYDHHTEFAVGVDMSVLVEGLLASTGW 301 (317)
Q Consensus 268 ~~~~-~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~ 301 (317)
+.+- .+..+...........+.|+ +++++.||.
T Consensus 497 t~~W~~~~~~~~~R~~hs~a~ll~d-g~v~v~GG~ 530 (656)
T 1k3i_A 497 QDTFYKQNPNSIVRVYHSISLLLPD-GRVFNGGGG 530 (656)
T ss_dssp GTEEEECCCCSSCCCTTEEEEECTT-SCEEEEECC
T ss_pred CCceeecCCCCCccccccHhhcCCC-cEEEecCCC
Confidence 7651 11111111111223344566 788888884
No 266
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.03 E-value=2.6e-06 Score=76.73 Aligned_cols=228 Identities=10% Similarity=0.013 Sum_probs=142.5
Q ss_pred CceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCC-CCCceeeccCCcceEEEEE
Q 021121 36 NGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPT-ANPIRSLHEHTREVHSADY 114 (317)
Q Consensus 36 ~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~-~~~~~~~~~~~~~v~~~~~ 114 (317)
...|+..++.... ...+ ......+..|+|.+....++++-...+.|+.+++..... ......+.........|++
T Consensus 403 ~~~Ir~i~l~~~~--~~~l--~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAv 478 (791)
T 3m0c_C 403 RHEVRKMTLDRSE--YTSL--IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAV 478 (791)
T ss_dssp BSSEEEECTTSCC--CEEE--ECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEE
T ss_pred ccceeEeeccCCc--ceee--ecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeee
Confidence 3478888877553 2222 234566889999986655666666678898888764211 1222233323455678899
Q ss_pred ecCCCCEEEEEcCCCEEEEEEcCCCceeEEeeccccceEEEEEecCCCCeEEEEeCC-CeEEEEeCCCCCceeeeccCcc
Q 021121 115 NPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGD-CTLRIWDVREMGSTMIIPAHEF 193 (317)
Q Consensus 115 ~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-g~i~i~d~~~~~~~~~~~~~~~ 193 (317)
.+.+.+++++-...+.|.+.+++.......+...-.....|++.|.++.++++-... +.|...++........+...-.
T Consensus 479 D~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~ 558 (791)
T 3m0c_C 479 DWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQ 558 (791)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCS
T ss_pred eecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCC
Confidence 887765777777789999999986544333333445689999999855555554333 7899999875444333333335
Q ss_pred ceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEecC--CCceeEEEecCCCCeeEEeeecCCeEEEEeccccc
Q 021121 194 EILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGH--GYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVED 270 (317)
Q Consensus 194 ~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~ 270 (317)
....|++++..+.++++-.....|..+++..... ....... -.....|++. +.+++++-...+.|...|..+++
T Consensus 559 ~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~-~~v~~~~~~l~~P~glav~--~~~lYwtD~~~~~I~~~dk~tG~ 634 (791)
T 3m0c_C 559 WPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGS 634 (791)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCC
T ss_pred CceEEEEecCCCeEEEEeCCCCcEEEEecCCCce-EEEecCCCccCCCCEEEEe--CCEEEEEECCCCEEEEEeCCCCc
Confidence 6789999985666666656667899999876443 3333321 1233466664 33466666667888888866654
No 267
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.03 E-value=5.2e-07 Score=78.67 Aligned_cols=181 Identities=9% Similarity=-0.014 Sum_probs=106.2
Q ss_pred EEEecCCCCEEEEEcCC----------------CEEEEEEcCCCceeEEeeccc----------cceEEEEEecCCC---
Q 021121 112 ADYNPTRRDSFITSSWD----------------DTVKLWTVDRPTSVRTFKEHA----------YCVYNATWNPRHS--- 162 (317)
Q Consensus 112 ~~~~~~~~~~l~~~~~d----------------g~v~iwd~~~~~~~~~~~~~~----------~~v~~~~~~~~~~--- 162 (317)
+++.++.. .++.+..+ +.|..+|.++++.+..++... .++ -+...++ +
T Consensus 240 ~a~d~~~g-~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~-l~~~~~~-G~~~ 316 (571)
T 2ad6_A 240 YAYDPKLN-LFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMV-LTDQPVN-GKMT 316 (571)
T ss_dssp CEEETTTT-EEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCE-EEEEEET-TEEE
T ss_pred EEEcCCCC-eEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCE-EEecccC-CcEE
Confidence 45666655 56555432 369999999999887775321 222 1222234 4
Q ss_pred CeEEEEeCCCeEEEEeCCCCCceeeeccCc-------------cce--------------------------EEEEecCC
Q 021121 163 DVFCSASGDCTLRIWDVREMGSTMIIPAHE-------------FEI--------------------------LACDWNKY 203 (317)
Q Consensus 163 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-------------~~v--------------------------~~i~~~~~ 203 (317)
.+++.++.+|.++++|.++++.+...+... .++ ..++++|
T Consensus 317 ~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp- 395 (571)
T 2ad6_A 317 PLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDP- 395 (571)
T ss_dssp EEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEET-
T ss_pred EEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECC-
Confidence 467788999999999999998776553211 111 2356777
Q ss_pred CCcEEEEEe-------------------------------------cCCcEEEEEccCCCccEEEEecCCCceeEEEecC
Q 021121 204 DDCLIASAS-------------------------------------VDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSP 246 (317)
Q Consensus 204 ~~~~l~~~~-------------------------------------~d~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~ 246 (317)
+..++++.. .++.|..||..+++. +..... ...+....+..
T Consensus 396 ~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~-~W~~~~-~~~~~~~~~~t 473 (571)
T 2ad6_A 396 ESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKA-KWTKWE-KFAAWGGTLYT 473 (571)
T ss_dssp TTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCE-EEEEEE-SSCCCSBCEEE
T ss_pred CCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCE-EEEecC-CCCccceeEEE
Confidence 444554442 347899999998775 444332 22233322333
Q ss_pred CCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEe
Q 021121 247 HRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLAST 299 (317)
Q Consensus 247 ~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~ 299 (317)
.+. +++.++.|+.++.+|.++++.+-....+....-..+.+..++..++++.
T Consensus 474 ~gg-~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~yv~~~ 525 (571)
T 2ad6_A 474 KGG-LVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYIGSM 525 (571)
T ss_dssp TTT-EEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred CCC-EEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEEEEEE
Confidence 344 5777899999999999998844333222221122344556633344443
No 268
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.01 E-value=3.2e-06 Score=76.91 Aligned_cols=274 Identities=10% Similarity=0.052 Sum_probs=165.3
Q ss_pred cceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeee-------------ecCCCCeeEEEecCCCCC
Q 021121 8 FNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVA-------------FDTADGVYDLAWSESHDS 74 (317)
Q Consensus 8 ~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~-------------~~~~~~v~~~~~~~~~~~ 74 (317)
..|+++...+ ++.+.+++. .+-|.+++...... ..... .-....|.++...+++
T Consensus 258 ~~i~~i~~d~--~g~lWigt~-------~~Gl~~~~~~~~~~--~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g-- 324 (781)
T 3v9f_A 258 SYIFSIKQLK--DNKLWIATE-------LNGIMILDLQQNQF--LLPEQIRFEFIREGDNNYSLSNASARYIFQDSFN-- 324 (781)
T ss_dssp CCEEEEEECT--TSEEEEEES-------SSCEEEEETTCC-----------CEEECBCSSTTSBSSSCEEEEEECSSC--
T ss_pred ceEEEEEECC--CCCEEEEeC-------CCCeEEECCCCCee--eeeeccccccccCCCCCCCCCCCeEEEEEEeCCC--
Confidence 4577887777 688888775 35688888765431 11110 0123568899888876
Q ss_pred eEEEEEcCCeEEEEEeCCCCCCCCceeec----------cCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEE
Q 021121 75 LLIAAVADGSVKIYDTALPPTANPIRSLH----------EHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRT 144 (317)
Q Consensus 75 ~l~~~~~dg~i~v~~~~~~~~~~~~~~~~----------~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~ 144 (317)
.|..|+.++-|..++.... ....+. .....|.++...+++. |..|+.++-|..||..+++....
T Consensus 325 ~lWigt~~~Gl~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~--lWigt~~~Gl~~~~~~~~~~~~~ 398 (781)
T 3v9f_A 325 NIWIGTWGGGINFISNAPP----TFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK--LWIGTDGGGINVFENGKRVAIYN 398 (781)
T ss_dssp CEEEEEBSSCEEEECSSCC----SCEEEC----CCCSSCCSSSCEEEEEECTTSC--EEEEEBSSCEEEEETTEEEEECC
T ss_pred CEEEEecCCeEEEeCCCCC----cceeeccCccccccCCCCCcceEEEEEcCCCC--EEEEeCCCcEEEEECCCCeEEEc
Confidence 4777776666888886543 111111 1235688998887775 66666666788898765432211
Q ss_pred e---eccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeec--cCccceEEEEecCCCCcEEEEEecCCcEEE
Q 021121 145 F---KEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIP--AHEFEILACDWNKYDDCLIASASVDKSIKI 219 (317)
Q Consensus 145 ~---~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v 219 (317)
. ......|.++...++ +.+. .|+.++-|..+|.++++...... .....|.++...+ ++.+.+ |+. +.+..
T Consensus 399 ~~~~~~~~~~v~~i~~d~~-g~lW-igt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~-~g~lwi-gt~-~Gl~~ 473 (781)
T 3v9f_A 399 KENRELLSNSVLCSLKDSE-GNLW-FGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDK-NKKIWI-GTH-AGVFV 473 (781)
T ss_dssp -----CCCSBEEEEEECTT-SCEE-EEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECT-TSEEEE-EET-TEEEE
T ss_pred cCCCCCCCcceEEEEECCC-CCEE-EEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECC-CCCEEE-EEC-CceEE
Confidence 1 122356888888766 5544 57777779999987654322211 1345688888887 665444 455 56889
Q ss_pred EEccCCCccEEEEecC-----CCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeec----ccceeEeEEEEe
Q 021121 220 WDVRNYRVPIAVLNGH-----GYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDH----HTEFAVGVDMSV 290 (317)
Q Consensus 220 ~d~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~----~~~~v~~~~~~~ 290 (317)
||..+.+. ....... ...|.++...+++. |..|+.++-+..||..+.+ . ..+.. ....|.++...+
T Consensus 474 ~~~~~~~~-~~~~~~~~~~~~~~~i~~i~~d~~g~--lWigt~~~Gl~~~~~~~~~-~-~~~~~~~~l~~~~i~~i~~d~ 548 (781)
T 3v9f_A 474 IDLASKKV-IHHYDTSNSQLLENFVRSIAQDSEGR--FWIGTFGGGVGIYTPDMQL-V-RKFNQYEGFCSNTINQIYRSS 548 (781)
T ss_dssp EESSSSSC-CEEECTTTSSCSCSCEEEEEECTTCC--EEEEESSSCEEEECTTCCE-E-EEECTTTTCSCSCEEEEEECT
T ss_pred EeCCCCeE-EecccCcccccccceeEEEEEcCCCC--EEEEEcCCCEEEEeCCCCe-E-EEccCCCCCCCCeeEEEEECC
Confidence 99876543 2221111 35789999998887 4445553447778876653 2 22221 134578887776
Q ss_pred ccCCeEEEeecCCcEEEEecCC
Q 021121 291 LVEGLLASTGWDELVYVWQQGM 312 (317)
Q Consensus 291 ~~~~~l~s~~~dg~i~~w~~~~ 312 (317)
+ +. |..++.+|.+..|+...
T Consensus 549 ~-g~-lWi~T~~Glv~~~d~~~ 568 (781)
T 3v9f_A 549 K-GQ-MWLATGEGLVCFPSARN 568 (781)
T ss_dssp T-SC-EEEEETTEEEEESCTTT
T ss_pred C-CC-EEEEECCCceEEECCCC
Confidence 5 44 44444467547777654
No 269
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=99.01 E-value=1.2e-06 Score=76.51 Aligned_cols=181 Identities=9% Similarity=-0.050 Sum_probs=105.9
Q ss_pred EEEecCCCCEEEEEcCC----------------CEEEEEEcCCCceeEEeecccc---------ceEEEEEe-cCCC---
Q 021121 112 ADYNPTRRDSFITSSWD----------------DTVKLWTVDRPTSVRTFKEHAY---------CVYNATWN-PRHS--- 162 (317)
Q Consensus 112 ~~~~~~~~~~l~~~~~d----------------g~v~iwd~~~~~~~~~~~~~~~---------~v~~~~~~-~~~~--- 162 (317)
+++.+... +++.+..+ +.|..+|.++++.+..++.... ...-+... .+ +
T Consensus 246 ~a~d~~~g-~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~-G~~~ 323 (599)
T 1w6s_A 246 YAYDPGTN-LIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKD-GKAR 323 (599)
T ss_dssp CEEETTTT-EEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTT-SCEE
T ss_pred eeEeCCCC-EEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccC-CcEE
Confidence 45556655 67766654 4899999999999887764321 11112222 34 4
Q ss_pred CeEEEEeCCCeEEEEeCCCCCceeeeccCc-------------cce--------------------------EEEEecCC
Q 021121 163 DVFCSASGDCTLRIWDVREMGSTMIIPAHE-------------FEI--------------------------LACDWNKY 203 (317)
Q Consensus 163 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-------------~~v--------------------------~~i~~~~~ 203 (317)
..++.++.+|.++++|.++++.+....... .++ ..++++|
T Consensus 324 ~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp- 402 (599)
T 1w6s_A 324 KLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDP- 402 (599)
T ss_dssp EEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEET-
T ss_pred EEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCC-
Confidence 567778999999999999998776543111 111 2355666
Q ss_pred CCcEEEEE---------------------------------e------cCCcEEEEEccCCCccEEEEecCCCceeEEEe
Q 021121 204 DDCLIASA---------------------------------S------VDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKF 244 (317)
Q Consensus 204 ~~~~l~~~---------------------------------~------~d~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~ 244 (317)
+..++++. + ..|.|..||+.+++. +..... ..+...-..
T Consensus 403 ~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~-~W~~~~-~~~~~~g~~ 480 (599)
T 1w6s_A 403 KRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDY-KWEKME-RFAVWGGTM 480 (599)
T ss_dssp TTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCE-EEEEEE-SSCCCSBCE
T ss_pred CCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCE-EeEecC-CCCccCcce
Confidence 43343332 1 347788999988774 333321 112221112
Q ss_pred cCCCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEE
Q 021121 245 SPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLAS 298 (317)
Q Consensus 245 ~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s 298 (317)
...+. +++.++.|+.++.||.++++.+-+...+......-+.+..++..++++
T Consensus 481 ~tagg-~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~qyv~~ 533 (599)
T 1w6s_A 481 ATAGD-LVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQYVAI 533 (599)
T ss_dssp EETTT-EEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred EecCC-EEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEeCCEEEEEE
Confidence 22344 677789999999999999985443322222222335566664445544
No 270
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.01 E-value=8.9e-07 Score=71.55 Aligned_cols=239 Identities=11% Similarity=0.049 Sum_probs=140.0
Q ss_pred ceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeee------------------cCCCCeeEEEecC
Q 021121 9 NGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAF------------------DTADGVYDLAWSE 70 (317)
Q Consensus 9 ~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~------------------~~~~~v~~~~~~~ 70 (317)
...+++|+| ++.++.+... ++.|..|+..... ....... .....+..+++.+
T Consensus 20 ~p~~i~~d~--~g~~l~v~~~------~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~ 89 (322)
T 2fp8_A 20 APNSFTFDS--TNKGFYTSVQ------DGRVIKYEGPNSG--FVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNL 89 (322)
T ss_dssp CCCCEECCT--TCSSEEEECT------TSEEEEECCTTTC--EEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEET
T ss_pred CceEEEEcC--CCCEEEEEcC------CCeEEEECCCCCc--eEEEecccccccccccccccchhccccCCCCceEEEcC
Confidence 467788998 5664444433 7899999876543 2221110 0113578899997
Q ss_pred -CCCCeEEEEEcCCeEEEEEeCCCCCCCCcee-ecc-CCcceEEEEEec-CCCCEEEEEcC-----------------CC
Q 021121 71 -SHDSLLIAAVADGSVKIYDTALPPTANPIRS-LHE-HTREVHSADYNP-TRRDSFITSSW-----------------DD 129 (317)
Q Consensus 71 -~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~-~~~-~~~~v~~~~~~~-~~~~~l~~~~~-----------------dg 129 (317)
++ .|+++...+.|..+|...+. .+.+.. ..+ .......+++.+ +|. +.++-.. ++
T Consensus 90 ~~g--~l~v~d~~~~i~~~d~~~g~-~~~~~~~~~~~~~~~p~~i~~d~~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g 165 (322)
T 2fp8_A 90 QNN--QLYIVDCYYHLSVVGSEGGH-ATQLATSVDGVPFKWLYAVTVDQRTGI-VYFTDVSTLYDDRGVQQIMDTSDKTG 165 (322)
T ss_dssp TTT--EEEEEETTTEEEEECTTCEE-CEEEESEETTEECSCEEEEEECTTTCC-EEEEESCSSCCTTCHHHHHHHTCCCE
T ss_pred CCC--cEEEEECCCCEEEEeCCCCE-EEEecccCCCCcccccceEEEecCCCE-EEEECCcccccccccceehcccCCCc
Confidence 54 45555555557777754321 111111 111 123467899999 886 5555432 37
Q ss_pred EEEEEEcCCCceeEEeeccccceEEEEEecCCCC-eEEEEeCCCeEEEEeCCCCC--ceeeeccCccceEEEEecCCCCc
Q 021121 130 TVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSD-VFCSASGDCTLRIWDVREMG--STMIIPAHEFEILACDWNKYDDC 206 (317)
Q Consensus 130 ~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~v~~i~~~~~~~~ 206 (317)
.|..+|..+++...... .-.....++++|+ ++ ++++-...+.|..|++.... ....+..... ...+++++ +++
T Consensus 166 ~v~~~d~~~~~~~~~~~-~~~~p~gia~~~d-g~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~-~G~ 241 (322)
T 2fp8_A 166 RLIKYDPSTKETTLLLK-ELHVPGGAEVSAD-SSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNA-DGH 241 (322)
T ss_dssp EEEEEETTTTEEEEEEE-EESCCCEEEECTT-SSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECT-TSC
T ss_pred eEEEEeCCCCEEEEecc-CCccCcceEECCC-CCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECC-CCC
Confidence 89999987665433222 2234678999998 66 44555667899999987532 1122211223 67889998 888
Q ss_pred EEEEEec----------CCcEEEEEccCCCccEEEEecC----CCceeEEEecCCCCeeEEeeecCCeEEEEecccc
Q 021121 207 LIASASV----------DKSIKIWDVRNYRVPIAVLNGH----GYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVE 269 (317)
Q Consensus 207 ~l~~~~~----------d~~i~v~d~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~ 269 (317)
++++... .+.|..+|.. ++ .+..+... -..++.+++. ++. ++++...++.|..+++...
T Consensus 242 l~va~~~~~~~~~~~~~~~~v~~~d~~-G~-~~~~~~~~~g~~~~~~~~~~~~-~g~-L~v~~~~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 242 FWVSSSEELDGNMHGRVDPKGIKFDEF-GN-ILEVIPLPPPFAGEHFEQIQEH-DGL-LYIGTLFHGSVGILVYDKK 314 (322)
T ss_dssp EEEEEEEETTSSTTSCEEEEEEEECTT-SC-EEEEEECCTTTTTSCCCEEEEE-TTE-EEEECSSCSEEEEEEC---
T ss_pred EEEEecCcccccccCCCccEEEEECCC-CC-EEEEEECCCCCccccceEEEEe-CCE-EEEeecCCCceEEEecccc
Confidence 7776654 4668888864 33 24444332 2346677763 454 6666667888999987643
No 271
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.00 E-value=2.9e-06 Score=68.27 Aligned_cols=231 Identities=6% Similarity=-0.026 Sum_probs=143.2
Q ss_pred eEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCcee-EEeeccccceE
Q 021121 75 LLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSV-RTFKEHAYCVY 153 (317)
Q Consensus 75 ~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~-~~~~~~~~~v~ 153 (317)
+|+.+. ...|+..+++... ...............++|.+.+..++.+-...+.|..+++...... ..+...-..+.
T Consensus 6 ~ll~~~-~~~I~~i~l~~~~--~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~ 82 (318)
T 3sov_A 6 LLLYAN-RRDLRLVDATNGK--ENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPD 82 (318)
T ss_dssp EEEEEC-EEEEEEEETTCTT--SCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCC
T ss_pred EEEEEc-cCeEEEEECCCCc--eEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCcc
Confidence 344433 4578888887541 1111122223456789999866546666677889999998866422 22222234577
Q ss_pred EEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEe-cCCcEEEEEccCCCccEEEE
Q 021121 154 NATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASAS-VDKSIKIWDVRNYRVPIAVL 232 (317)
Q Consensus 154 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~-~d~~i~v~d~~~~~~~~~~~ 232 (317)
.+++.+.+++++++-...+.|.++++..................++++|..+.++.+-. ..+.|..+++..... ....
T Consensus 83 glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~-~~~~ 161 (318)
T 3sov_A 83 GLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR-FIII 161 (318)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSC-EEEE
T ss_pred EEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCe-EEEE
Confidence 89998865777777777889999998754433333333445689999984455555542 357888888765332 2222
Q ss_pred ecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEeecCCcEEEEecCC
Q 021121 233 NGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGM 312 (317)
Q Consensus 233 ~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~ 312 (317)
...-...+.++++|++..+.++=+..+.|..+|+..... ............++++.. +.++.+-...+.|..++...
T Consensus 162 ~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~-~~~~~~~~~~P~glav~~--~~lywtd~~~~~V~~~~~~~ 238 (318)
T 3sov_A 162 NSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNR-QAVVKGSLPHPFALTLFE--DILYWTDWSTHSILACNKYT 238 (318)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSCCSCEEEEEEET--TEEEEEETTTTEEEEEETTT
T ss_pred ECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCce-EEEecCCCCCceEEEEeC--CEEEEEecCCCeEEEEECCC
Confidence 222345689999997776666666778899999865332 112222234456777752 55666666678888888743
No 272
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.00 E-value=1.9e-06 Score=66.41 Aligned_cols=201 Identities=12% Similarity=0.114 Sum_probs=130.6
Q ss_pred eccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeec-cccceEEEEEecCCCCeEEEEeCCCeEEEEeCC
Q 021121 102 LHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKE-HAYCVYNATWNPRHSDVFCSASGDCTLRIWDVR 180 (317)
Q Consensus 102 ~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 180 (317)
+.+-...+..++|+|++..++++...++.|...|.. ++.++.+.- .......+++.++ +.++++.-.++.+.++++.
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~-g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGD-NQFVISDERDYAIYVISLT 99 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECST-TEEEEEETTTTEEEEEEEC
T ss_pred CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCC-CEEEEEECCCCcEEEEEcC
Confidence 334446799999999876466667889999999998 877777642 2246788899877 5666665567889999886
Q ss_pred CCCcee---eec------cCccceEEEEecCCCCcEEEEEecCCcEEEEEccCC--CccEEEEe-------cCCCceeEE
Q 021121 181 EMGSTM---IIP------AHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNY--RVPIAVLN-------GHGYAVRKV 242 (317)
Q Consensus 181 ~~~~~~---~~~------~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~--~~~~~~~~-------~~~~~v~~~ 242 (317)
....+. ... ..+.....++|+| .++.|.++.+.....+|.+... ...+.... .+-..+.++
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~-~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l 178 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSR-QDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGA 178 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEET-TTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeC-CCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeE
Confidence 654321 111 1234468999999 6655555555555555555421 11122221 123457899
Q ss_pred EecCCCCeeEEeeecCCeEEEEecccccceeeeeeccc---------ceeEeEEEEeccCCeEEEeecCCcEEEEe
Q 021121 243 KFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHT---------EFAVGVDMSVLVEGLLASTGWDELVYVWQ 309 (317)
Q Consensus 243 ~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~~l~s~~~dg~i~~w~ 309 (317)
+++|...++++.....+.+.++|.... ++..+.-.. ..-.+|+|.++ +++.++ +..+.++.+.
T Consensus 179 ~~dp~tg~lliLS~~s~~L~~~d~~g~--~~~~~~L~~g~~~l~~~~~qpEGia~d~~-G~lyIv-sE~n~~y~f~ 250 (255)
T 3qqz_A 179 EFNQQKNTLLVLSHESRALQEVTLVGE--VIGEMSLTKGSRGLSHNIKQAEGVAMDAS-GNIYIV-SEPNRFYRFT 250 (255)
T ss_dssp EEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECSTTGGGCSSCCCSEEEEEECTT-CCEEEE-ETTTEEEEEE
T ss_pred EEcCCCCeEEEEECCCCeEEEEcCCCC--EEEEEEcCCccCCcccccCCCCeeEECCC-CCEEEE-cCCceEEEEE
Confidence 999988888888888899999996643 333332221 25688999998 564444 6666555543
No 273
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.97 E-value=2e-06 Score=66.27 Aligned_cols=197 Identities=10% Similarity=0.173 Sum_probs=127.2
Q ss_pred CCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeec-cCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcC
Q 021121 59 TADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLH-EHTREVHSADYNPTRRDSFITSSWDDTVKLWTVD 137 (317)
Q Consensus 59 ~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~ 137 (317)
-...+..++|+|++..++++...++.|...|.. + +.+..+. .-......+++.+++. ++++.-.++.+.++++.
T Consensus 25 ~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g---~v~~~i~l~g~~D~EGIa~~~~g~-~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 25 ITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-G---DLIRTIPLDFVKDLETIEYIGDNQ-FVISDERDYAIYVISLT 99 (255)
T ss_dssp CCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-C---CEEEEEECSSCSSEEEEEECSTTE-EEEEETTTTEEEEEEEC
T ss_pred cccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-C---CEEEEEecCCCCChHHeEEeCCCE-EEEEECCCCcEEEEEcC
Confidence 345699999999876666677778888888876 3 4444432 1235678889988876 66776677899999887
Q ss_pred CCcee---EEee------ccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCC---CCceeeec-------cCccceEEE
Q 021121 138 RPTSV---RTFK------EHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVRE---MGSTMIIP-------AHEFEILAC 198 (317)
Q Consensus 138 ~~~~~---~~~~------~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~---~~~~~~~~-------~~~~~v~~i 198 (317)
....+ .... ..+.....++|+|. ++.|+++.......+|.++. ...+..+. .....+.++
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~-~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l 178 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQ-DHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGA 178 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETT-TTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCC-CCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeE
Confidence 65432 2221 12344689999998 55555555544445554431 11122111 123356899
Q ss_pred EecCCCCcEEEEEecCCcEEEEEccCCCccEEEEecCC---------CceeEEEecCCCCeeEEeeecCCeEEEEe
Q 021121 199 DWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHG---------YAVRKVKFSPHRRNLLASCSYDMTVCLWD 265 (317)
Q Consensus 199 ~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~~l~~~~~d~~i~vwd 265 (317)
+++|..+.+++.......+.++|.... ++..+.-.. ...-.|+|.++|. +.++ ++-+.+..+.
T Consensus 179 ~~dp~tg~lliLS~~s~~L~~~d~~g~--~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIv-sE~n~~y~f~ 250 (255)
T 3qqz_A 179 EFNQQKNTLLVLSHESRALQEVTLVGE--VIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIV-SEPNRFYRFT 250 (255)
T ss_dssp EEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEE-ETTTEEEEEE
T ss_pred EEcCCCCeEEEEECCCCeEEEEcCCCC--EEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEE-cCCceEEEEE
Confidence 999988888888888899999997753 233332111 2557899999997 4444 6666666654
No 274
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.95 E-value=3.6e-06 Score=76.07 Aligned_cols=247 Identities=9% Similarity=-0.032 Sum_probs=128.4
Q ss_pred ceeEEEEe-cCCCCeEEEEEecccccccCceEEEEecCCC-CCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcC----
Q 021121 9 NGYSVKFS-PFYESRLAVATAQNFGILGNGRVHVLDLSPA-APALTELVAFDTADGVYDLAWSESHDSLLIAAVAD---- 82 (317)
Q Consensus 9 ~v~~~~~~-p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d---- 82 (317)
.+...+|| |+ ...++.+.... + .....|+++|+..+ ......+. .....++|+||+. .|+....+
T Consensus 175 ~~~~~~~S~PD-G~~lAy~~~~~-G-~~~~~l~v~dl~~g~~~l~~~~~-----~~~~~~~WspDg~-~l~y~~~d~~~~ 245 (751)
T 2xe4_A 175 DVMEVKPAPPE-HDLVAFSVDMS-G-NEVYTIEFKRISDPSQTIADKVS-----GTNGEIVWGPDHT-SLFYVTKDETLR 245 (751)
T ss_dssp EEEEEEECTTT-TCEEEEEEESS-S-SSCEEEEEEETTCTTCCCCCCEE-----EECSCCEECSSTT-EEEEEEECTTCC
T ss_pred EEeeeEecCCC-CCEEEEEEeCC-C-CceEEEEEEECCCCCEeCCcccc-----CceeeEEEecCCC-EEEEEEECCCCC
Confidence 56788999 94 23444444420 0 00125999999876 42111111 1135688999985 45444444
Q ss_pred -CeEEEEEeCCCCCCCCceeec-cCCcceEEEEEecCCCCEEEEEc---CCCEEEEEEcCCCc-ee--EEee-ccccceE
Q 021121 83 -GSVKIYDTALPPTANPIRSLH-EHTREVHSADYNPTRRDSFITSS---WDDTVKLWTVDRPT-SV--RTFK-EHAYCVY 153 (317)
Q Consensus 83 -g~i~v~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~---~dg~v~iwd~~~~~-~~--~~~~-~~~~~v~ 153 (317)
..|.++++.++. ......+. ........+.|+|+++ +|+..+ ....|.++|+.++. .. ..+. .......
T Consensus 246 ~~~v~~~~lgt~~-~~~~lv~~~~~~~~~~~~~~SpDg~-~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~ 323 (751)
T 2xe4_A 246 ENKVWRHVMGKLQ-SEDVCLYEEHNPLFSAFMYKAADTN-TLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRY 323 (751)
T ss_dssp EEEEEEEETTSCG-GGCEEEEECCCTTCEEEEEECTTSS-EEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCE
T ss_pred CCEEEEEECCCCc-hhcEEEEecCCCceEEEEEECCCCC-EEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceE
Confidence 246666665431 11122222 2234466789999998 554433 24578889998752 22 3332 2344556
Q ss_pred EEEEecCCCCeEEEEeCC----CeEEEEeCCCCCceee-eccCcc--ceEEEEecCCCCcEEEEEecCCc--EEEEEc--
Q 021121 154 NATWNPRHSDVFCSASGD----CTLRIWDVREMGSTMI-IPAHEF--EILACDWNKYDDCLIASASVDKS--IKIWDV-- 222 (317)
Q Consensus 154 ~~~~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~-~~~~~~--~v~~i~~~~~~~~~l~~~~~d~~--i~v~d~-- 222 (317)
++.|+.. +.+++....+ ..|..+|+.+...... +..+.. .+..+.+. .+.++++...++. |.++|+
T Consensus 324 s~~~~~g-~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~--~~~lv~~~~~~g~~~l~~~dl~~ 400 (751)
T 2xe4_A 324 DVQMHGT-SHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR--SNYLVVAGRRAGLTRIWTMMADS 400 (751)
T ss_dssp EEEEETT-TEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC--SSEEEEEEEETTEEEEEEEECCT
T ss_pred EEeeeeC-CEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE--CCEEEEEEEeCCEEEEEEEeccc
Confidence 6666543 5555554443 3677778764322222 222332 34555554 4567777777775 455564
Q ss_pred -----cCCCccEEEEec-CCCceeEEEe----cCCCCeeEEeeecC---CeEEEEeccccc
Q 021121 223 -----RNYRVPIAVLNG-HGYAVRKVKF----SPHRRNLLASCSYD---MTVCLWDFMVED 270 (317)
Q Consensus 223 -----~~~~~~~~~~~~-~~~~v~~~~~----~~~~~~~l~~~~~d---~~i~vwd~~~~~ 270 (317)
..++ ....+.- ....+..+.+ ++++..++++.+.. ..+..+|+.+++
T Consensus 401 ~~~~~~~g~-~~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~ 460 (751)
T 2xe4_A 401 QDGVFKAGT-GLREVVMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHS 460 (751)
T ss_dssp TTSCCCTTT-CCEECCCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCC
T ss_pred ccccccCCc-cceEECCCCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 2222 0223221 1122334433 34666566665543 357777776654
No 275
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.94 E-value=7.7e-06 Score=74.39 Aligned_cols=276 Identities=8% Similarity=0.059 Sum_probs=163.2
Q ss_pred cceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeee------cCCCCeeEEEecCCCCCeEEEEEc
Q 021121 8 FNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAF------DTADGVYDLAWSESHDSLLIAAVA 81 (317)
Q Consensus 8 ~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~l~~~~~ 81 (317)
..|.++...+ ++.+.+++. + -+.+||..... +...... -....|.++...+++ .|..|+.
T Consensus 211 ~~i~~i~~d~--~g~lwigt~-------~-Gl~~~d~~~~~--~~~~~~~~~~~~~l~~~~i~~i~~d~~g--~lWigt~ 276 (781)
T 3v9f_A 211 NDVRCIYKDT--NGNIWIGTS-------K-GLALFNANTET--FTNFHNNPGNIHGALSSYIFSIKQLKDN--KLWIATE 276 (781)
T ss_dssp SSEEEEEECT--TCCEEEEET-------T-EEEEEETTTTE--EEC-----------CCCCEEEEEECTTS--EEEEEES
T ss_pred CceeEEEEcC--CCCEEEEeC-------C-cHheECCCCCc--EEEEEcCCCccccccCceEEEEEECCCC--CEEEEeC
Confidence 4577777666 677777764 3 68888876543 2211110 124568999888776 5777777
Q ss_pred CCeEEEEEeCCCCCCCCcee------------eccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEee---
Q 021121 82 DGSVKIYDTALPPTANPIRS------------LHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFK--- 146 (317)
Q Consensus 82 dg~i~v~~~~~~~~~~~~~~------------~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~--- 146 (317)
.+-|.+++.....- ..... ..-....|.++...+++. |-.|+.++-|..++..+........
T Consensus 277 ~~Gl~~~~~~~~~~-~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~--lWigt~~~Gl~~~~~~~~~~~~~~~~~~ 353 (781)
T 3v9f_A 277 LNGIMILDLQQNQF-LLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN--IWIGTWGGGINFISNAPPTFHTWSYSPT 353 (781)
T ss_dssp SSCEEEEETTCC----------CEEECBCSSTTSBSSSCEEEEEECSSCC--EEEEEBSSCEEEECSSCCSCEEEC----
T ss_pred CCCeEEECCCCCee-eeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC--EEEEecCCeEEEeCCCCCcceeeccCcc
Confidence 45588888765411 11110 012345789998888775 6667767778889887654322111
Q ss_pred ------ccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeee---ccCccceEEEEecCCCCcEEEEEecCCcE
Q 021121 147 ------EHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMII---PAHEFEILACDWNKYDDCLIASASVDKSI 217 (317)
Q Consensus 147 ------~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~---~~~~~~v~~i~~~~~~~~~l~~~~~d~~i 217 (317)
.....|.++...++ +. +..|+.++-|..||..++...... ......|.++...+ ++.+. .|+.++.+
T Consensus 354 ~~~~~~l~~~~v~~i~~d~~-g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~-~g~lW-igt~~~Gl 429 (781)
T 3v9f_A 354 QMNESSLSNKVVSSVCDDGQ-GK-LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDS-EGNLW-FGTYLGNI 429 (781)
T ss_dssp CCCSSCCSSSCEEEEEECTT-SC-EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECT-TSCEE-EEETTEEE
T ss_pred ccccCCCCCcceEEEEEcCC-CC-EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECC-CCCEE-EEeccCCE
Confidence 12346888888776 44 446776667889997654222111 12235688888876 66544 46666778
Q ss_pred EEEEccCCCccEEEEe---cCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeecc-----cceeEeEEEE
Q 021121 218 KIWDVRNYRVPIAVLN---GHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHH-----TEFAVGVDMS 289 (317)
Q Consensus 218 ~v~d~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~-----~~~v~~~~~~ 289 (317)
..+|.++.+ ...+. .....|.++...+++. |..|+. +-+..+|..+++ ........ ...|.++...
T Consensus 430 ~~~~~~~~~--~~~~~~~~~~~~~v~~i~~d~~g~--lwigt~-~Gl~~~~~~~~~-~~~~~~~~~~~~~~~~i~~i~~d 503 (781)
T 3v9f_A 430 SYYNTRLKK--FQIIELEKNELLDVRVFYEDKNKK--IWIGTH-AGVFVIDLASKK-VIHHYDTSNSQLLENFVRSIAQD 503 (781)
T ss_dssp EEECSSSCE--EEECCSTTTCCCCEEEEEECTTSE--EEEEET-TEEEEEESSSSS-CCEEECTTTSSCSCSCEEEEEEC
T ss_pred EEEcCCCCc--EEEeccCCCCCCeEEEEEECCCCC--EEEEEC-CceEEEeCCCCe-EEecccCcccccccceeEEEEEc
Confidence 999887643 33332 1345789999888876 444555 558889987654 21111111 3568888877
Q ss_pred eccCCeEEEeecCCcEEEEecCC
Q 021121 290 VLVEGLLASTGWDELVYVWQQGM 312 (317)
Q Consensus 290 ~~~~~~l~s~~~dg~i~~w~~~~ 312 (317)
++ +. |..|+.++-|..|+...
T Consensus 504 ~~-g~-lWigt~~~Gl~~~~~~~ 524 (781)
T 3v9f_A 504 SE-GR-FWIGTFGGGVGIYTPDM 524 (781)
T ss_dssp TT-CC-EEEEESSSCEEEECTTC
T ss_pred CC-CC-EEEEEcCCCEEEEeCCC
Confidence 65 44 44455433366676543
No 276
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.93 E-value=1.2e-06 Score=79.17 Aligned_cols=192 Identities=13% Similarity=0.144 Sum_probs=109.8
Q ss_pred CeeEEEec-CCCCCeEEE-EEcCC----eEEEEEeCCC-CCCCCceeeccCCcceEEEEEecCCCCEEEEEcCC-----C
Q 021121 62 GVYDLAWS-ESHDSLLIA-AVADG----SVKIYDTALP-PTANPIRSLHEHTREVHSADYNPTRRDSFITSSWD-----D 129 (317)
Q Consensus 62 ~v~~~~~~-~~~~~~l~~-~~~dg----~i~v~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g 129 (317)
.+...+|| |||. +|+. ...+| .|+++|+..+ +.. ...+. .....+.|+||++ .|+....+ .
T Consensus 175 ~~~~~~~S~PDG~-~lAy~~~~~G~~~~~l~v~dl~~g~~~l--~~~~~---~~~~~~~WspDg~-~l~y~~~d~~~~~~ 247 (751)
T 2xe4_A 175 DVMEVKPAPPEHD-LVAFSVDMSGNEVYTIEFKRISDPSQTI--ADKVS---GTNGEIVWGPDHT-SLFYVTKDETLREN 247 (751)
T ss_dssp EEEEEEECTTTTC-EEEEEEESSSSSCEEEEEEETTCTTCCC--CCCEE---EECSCCEECSSTT-EEEEEEECTTCCEE
T ss_pred EEeeeEecCCCCC-EEEEEEeCCCCceEEEEEEECCCCCEeC--Ccccc---CceeeEEEecCCC-EEEEEEECCCCCCC
Confidence 57789999 9995 5554 44333 4999998765 311 11111 1234678999998 45444443 3
Q ss_pred EEEEEEcCCCcee--EEee-ccccceEEEEEecCCCCeEEEEe---CCCeEEEEeCCCCC-ce--eee-ccCccceEEEE
Q 021121 130 TVKLWTVDRPTSV--RTFK-EHAYCVYNATWNPRHSDVFCSAS---GDCTLRIWDVREMG-ST--MII-PAHEFEILACD 199 (317)
Q Consensus 130 ~v~iwd~~~~~~~--~~~~-~~~~~v~~~~~~~~~~~~l~~~~---~dg~i~i~d~~~~~-~~--~~~-~~~~~~v~~i~ 199 (317)
.|.++++.+++.. ..+. ........+.|+|+ ++.|+..+ ....|+++|+.++. .. ..+ ........++.
T Consensus 248 ~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpD-g~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~ 326 (751)
T 2xe4_A 248 KVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAAD-TNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQ 326 (751)
T ss_dssp EEEEEETTSCGGGCEEEEECCCTTCEEEEEECTT-SSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEE
T ss_pred EEEEEECCCCchhcEEEEecCCCceEEEEEECCC-CCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEe
Confidence 6888898876422 2222 22234678899999 66555443 24468889998753 22 333 33344556666
Q ss_pred ecCCCCcEEEEEecC----CcEEEEEccCCCccEEE-EecCCC--ceeEEEecCCCCeeEEeeecCCeEEEEe
Q 021121 200 WNKYDDCLIASASVD----KSIKIWDVRNYRVPIAV-LNGHGY--AVRKVKFSPHRRNLLASCSYDMTVCLWD 265 (317)
Q Consensus 200 ~~~~~~~~l~~~~~d----~~i~v~d~~~~~~~~~~-~~~~~~--~v~~~~~~~~~~~~l~~~~~d~~i~vwd 265 (317)
|+. .+.+++....+ ..|..+|+.+... ... +..+.. .+..+.+ .+..++++...++..++|-
T Consensus 327 ~~~-g~~l~~~t~~~~a~~~~L~~~d~~~~~~-~~~~li~~~~~~~l~~~~~--~~~~lv~~~~~~g~~~l~~ 395 (751)
T 2xe4_A 327 MHG-TSHLVILTNEGGAVNHKLLIAPRGQPSD-WSHVLVDHSEDVFMESIAV--RSNYLVVAGRRAGLTRIWT 395 (751)
T ss_dssp EET-TTEEEEEECTTTCTTCEEEEEETTSTTC-CCCEEECCCSSEEEEEEEE--CSSEEEEEEEETTEEEEEE
T ss_pred eee-CCEEEEEeCCCCCCCcEEEEEcCCCccc-ceeeEECCCCCcEEEEEEE--ECCEEEEEEEeCCEEEEEE
Confidence 554 55555555443 2566677654221 122 233333 3445555 4555788888888755543
No 277
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.93 E-value=4.7e-06 Score=72.80 Aligned_cols=225 Identities=12% Similarity=0.089 Sum_probs=135.1
Q ss_pred EEEEEcCCeEEEEEeCCCCCCCCceeeccCC----cceEE-EEEecCCCCEEEEEc------CCCEEEEEEcCCCceeEE
Q 021121 76 LIAAVADGSVKIYDTALPPTANPIRSLHEHT----REVHS-ADYNPTRRDSFITSS------WDDTVKLWTVDRPTSVRT 144 (317)
Q Consensus 76 l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~----~~v~~-~~~~~~~~~~l~~~~------~dg~v~iwd~~~~~~~~~ 144 (317)
+++++.|+.+.-+|..++ +.+....... ..+.+ .... ++ .+++++ .+|.|+.+|.++++.+.+
T Consensus 124 V~v~t~dg~l~AlDa~TG---~~~W~~~~~~~~~~~~~~ssP~v~-~g--~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~ 197 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETG---ETVWKVENSDIKVGSTLTIAPYVV-KD--KVIIGSSGAELGVRGYLTAYDVKTGEQVWR 197 (599)
T ss_dssp EEEECTTSEEEEEETTTC---CEEEEEECCCGGGTCBCCSCCEEE-TT--EEEECCBCGGGTCCCEEEEEETTTCCEEEE
T ss_pred EEEEcCCCEEEEEECCCC---CEEEeecCCCCCccceeecCCEEE-CC--EEEEEecccccCCCCeEEEEECCCCcEEEE
Confidence 788888999999998876 4433322111 01111 1111 33 456555 389999999999998877
Q ss_pred eeccccc-------------------------------------e-EEEEEecCCCCeEEEEeCC---------------
Q 021121 145 FKEHAYC-------------------------------------V-YNATWNPRHSDVFCSASGD--------------- 171 (317)
Q Consensus 145 ~~~~~~~-------------------------------------v-~~~~~~~~~~~~l~~~~~d--------------- 171 (317)
+...... + ..+++.+. ..+++.+..+
T Consensus 198 ~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~-~g~vy~g~g~~~p~~~~~r~gd~~y 276 (599)
T 1w6s_A 198 AYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPG-TNLIYFGTGNPAPWNETMRPGDNKW 276 (599)
T ss_dssp EESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETT-TTEEEEECCCCSCSCGGGSCSCCTT
T ss_pred EcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCC-CCEEEEeCCCCccccCcccCCCccc
Confidence 6532111 0 13456666 5666666654
Q ss_pred -CeEEEEeCCCCCceeeeccCc----------cceEEEEec-CCCC---cEEEEEecCCcEEEEEccCCCccEEEEecC-
Q 021121 172 -CTLRIWDVREMGSTMIIPAHE----------FEILACDWN-KYDD---CLIASASVDKSIKIWDVRNYRVPIAVLNGH- 235 (317)
Q Consensus 172 -g~i~i~d~~~~~~~~~~~~~~----------~~v~~i~~~-~~~~---~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~- 235 (317)
+.|.-+|.++++.+-.++... .++. +... . ++ ..++.++.+|.++++|.++++. +......
T Consensus 277 ~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~-~G~~~~~v~~~~~~G~l~~lD~~tG~~-lw~~~~~~ 353 (599)
T 1w6s_A 277 TMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDK-DGKARKLLTHPDRNGIVYTLDRTDGAL-VSANKLDD 353 (599)
T ss_dssp SSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECT-TSCEEEEEEEECTTSEEEEEETTTCCE-EEEEESST
T ss_pred cceEEEEeCCCCceeeEeecCCCccccccCCCccEE-Eecccc-CCcEEEEEEEECCCcEEEEEECCCCCE-eecccccC
Confidence 489999999998887665322 1121 2222 2 55 5778888999999999998774 3332210
Q ss_pred ------------CCce--------------------------eEEEecCCCCeeEEee----------------------
Q 021121 236 ------------GYAV--------------------------RKVKFSPHRRNLLASC---------------------- 255 (317)
Q Consensus 236 ------------~~~v--------------------------~~~~~~~~~~~~l~~~---------------------- 255 (317)
..++ ..++++|+.. ++++.
T Consensus 354 ~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~-~~yv~~~~~~~~~~~~~~~~~~g~~~~ 432 (599)
T 1w6s_A 354 TVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRE-LFFMGINHICMDWEPFMLPYKAGQFFV 432 (599)
T ss_dssp TCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTT-EEEEEEECEEEEEEECCCCCCTTSCCC
T ss_pred CcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCC-EEEEeccccceeeecccccccCCccee
Confidence 1111 2456777665 33322
Q ss_pred -----------e------cCCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEeecCCcEEEEecCCCC
Q 021121 256 -----------S------YDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGMDP 314 (317)
Q Consensus 256 -----------~------~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~ 314 (317)
+ .+|.|..||+.+++.+-+.... .+..+-..... +.+++.++.||.++.||..+.+
T Consensus 433 g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~--~~~~~g~~~ta-gg~vf~gt~dg~l~A~D~~tG~ 505 (599)
T 1w6s_A 433 GATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMER--FAVWGGTMATA-GDLVFYGTLDGYLKARDSDTGD 505 (599)
T ss_dssp CEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEES--SCCCSBCEEET-TTEEEEECTTSEEEEEETTTCC
T ss_pred cccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCC--CCccCcceEec-CCEEEEECCCCeEEEEECCCCC
Confidence 1 3478999999988744332222 22222222333 5677788999999999988754
No 278
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.92 E-value=2e-05 Score=69.43 Aligned_cols=225 Identities=4% Similarity=-0.056 Sum_probs=144.8
Q ss_pred CceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEe
Q 021121 36 NGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYN 115 (317)
Q Consensus 36 ~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 115 (317)
.+.|+..+++... .........-..+..++|.+.++.++++-..++.|..++++.. .....+.........+++.
T Consensus 14 ~~~I~~i~l~~~~--~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~---~~~~v~~~g~~~P~GlAvD 88 (628)
T 4a0p_A 14 RADIRRISLETNN--NNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGS---ALEHVVEFGLDYPEGMAVD 88 (628)
T ss_dssp TTEEEEEESSCTT--CEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---SCEEEECSSCSCCCEEEEE
T ss_pred CCcEEEEECCCCC--cceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCC---CcEEEEeCCCCCcceEEEE
Confidence 5589999998654 2222222333468899999977556666667788998887643 2222222223456788888
Q ss_pred cCCCCEEEEEcCCCEEEEEEcCCCceeEEeeccccceEEEEEecCCCCeEEEE-eCCCeEEEEeCCCCCceeeeccCccc
Q 021121 116 PTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSA-SGDCTLRIWDVREMGSTMIIPAHEFE 194 (317)
Q Consensus 116 ~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~ 194 (317)
+.+.+++++-...+.|.+.+++.......+...-.....+++.|..+.++.+- +..+.|...++.......... .-..
T Consensus 89 ~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~-~~~~ 167 (628)
T 4a0p_A 89 WLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVP-NVGR 167 (628)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC-SCSS
T ss_pred eCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEEC-CCCC
Confidence 77664666767788999999875543323323445689999999756555554 235788888886554433333 3445
Q ss_pred eEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEeccccc
Q 021121 195 ILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVED 270 (317)
Q Consensus 195 v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~ 270 (317)
...+++++..++++++-...+.|..+|+..... ..+.........+++.. + +++++-...+.|...|..+++
T Consensus 168 P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~--~v~~~~l~~P~glav~~-~-~ly~tD~~~~~I~~~dk~tg~ 239 (628)
T 4a0p_A 168 ANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR--EVIADDLPHPFGLTQYQ-D-YIYWTDWSRRSIERANKTSGQ 239 (628)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSC--EEEEECCSCEEEEEEET-T-EEEEEETTTTEEEEEETTTCC
T ss_pred cceEEEccccCEEEEEECCCCEEEEEcCCCCce--EEeeccCCCceEEEEEC-C-EEEEecCCCCEEEEEECCCCC
Confidence 789999984566666666678899999976543 23333333456788765 3 356665567888888866554
No 279
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.91 E-value=6.5e-06 Score=71.93 Aligned_cols=166 Identities=9% Similarity=-0.015 Sum_probs=98.0
Q ss_pred CEEEEEEcCCCceeEEeec--cc-------cceEEEEEe-cCCC---CeEEEEeCCCeEEEEeCCCCCceeeeccCc---
Q 021121 129 DTVKLWTVDRPTSVRTFKE--HA-------YCVYNATWN-PRHS---DVFCSASGDCTLRIWDVREMGSTMIIPAHE--- 192 (317)
Q Consensus 129 g~v~iwd~~~~~~~~~~~~--~~-------~~v~~~~~~-~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~--- 192 (317)
+.|..+|.++++.+..++. |. ....-+... .+ + ..++.++.+|.++++|.++++.+.......
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~-G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~ 369 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKD-GKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNIT 369 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSS-SCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCC
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCC-CCEEEEEEEECCCceEEEEECCCCCEecccccccCcc
Confidence 6899999999999888753 21 111112222 34 4 378889999999999999998776543221
Q ss_pred ----------cc--------------------------------eEEEEecCCCCcEEEEEe------------------
Q 021121 193 ----------FE--------------------------------ILACDWNKYDDCLIASAS------------------ 212 (317)
Q Consensus 193 ----------~~--------------------------------v~~i~~~~~~~~~l~~~~------------------ 212 (317)
.+ -..++++|..+.+++...
T Consensus 370 ~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~ 449 (582)
T 1flg_A 370 WASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSA 449 (582)
T ss_dssp SEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSC
T ss_pred ccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCc
Confidence 00 013456663333333221
Q ss_pred --------------cCCcEEEEEccCCCccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeec
Q 021121 213 --------------VDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDH 278 (317)
Q Consensus 213 --------------~d~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~ 278 (317)
.+|.|..||+.+++. +...... .++..-.....+. +++.++.|+.++.||.++++.+- ++..
T Consensus 450 ~~g~~~~~~p~~~~~~G~l~A~D~~tG~~-~W~~~~~-~~~~~g~~~tagg-lvf~g~~dg~l~A~D~~tG~~lW-~~~~ 525 (582)
T 1flg_A 450 YLGMGFRIKRMYDDHVGSLRAMDPVSGKV-VWEHKEH-LPLWAGVLATAGN-LVFTGTGDGYFKAFDAKSGKELW-KFQT 525 (582)
T ss_dssp CCCEEEEEEESCSSCSEEEEEECTTTCCE-EEEEEES-SCCCSCCEEETTT-EEEEECTTSEEEEEETTTCCEEE-EEEC
T ss_pred eeccceeecCCCCCCcceEEEEECCCCCE-EEEecCC-CCCcccceEeCCC-EEEEECCCCcEEEEECCCCCEEE-EecC
Confidence 257899999998875 3333322 1222211222344 67779999999999999998543 4433
Q ss_pred ccc-eeEeEEEEeccCCeEEEe
Q 021121 279 HTE-FAVGVDMSVLVEGLLAST 299 (317)
Q Consensus 279 ~~~-~v~~~~~~~~~~~~l~s~ 299 (317)
... .-.-+.+..++..++++.
T Consensus 526 ~~g~~a~P~~y~~~G~qYv~~~ 547 (582)
T 1flg_A 526 GSGIVSPPITWEQDGEQYLGVT 547 (582)
T ss_dssp SSCCCSCCEEEEETTEEEEEEE
T ss_pred CCCcccCceEEEECCEEEEEEE
Confidence 222 122366667744455543
No 280
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.90 E-value=3.8e-06 Score=73.27 Aligned_cols=227 Identities=11% Similarity=0.030 Sum_probs=137.3
Q ss_pred CeEEEEEcCCeEEEEEeCCCCCCCCceeeccCC----cceEE-EEEecCCCCEEEEEcC------CCEEEEEEcCCCcee
Q 021121 74 SLLIAAVADGSVKIYDTALPPTANPIRSLHEHT----REVHS-ADYNPTRRDSFITSSW------DDTVKLWTVDRPTSV 142 (317)
Q Consensus 74 ~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~----~~v~~-~~~~~~~~~~l~~~~~------dg~v~iwd~~~~~~~ 142 (317)
..+++++.++.+..+|..++ +.+....... ..+.+ .... ++ .+++++. ++.|..+|.++++.+
T Consensus 116 ~~v~v~~~dg~l~alD~~tG---~~~W~~~~~~~~~~~~~~~~P~v~-~g--~v~vg~~~~~~~~~g~v~a~D~~tG~~~ 189 (571)
T 2ad6_A 116 GQIVKKQANGHLLALDAKTG---KINWEVEVCDPKVGSTLTQAPFVA-KD--TVLMGCSGAELGVRGAVNAFDLKTGELK 189 (571)
T ss_dssp TEEEEECTTSEEEEEETTTC---CEEEEEECCCGGGTCBCCSCCEEE-TT--EEEEECBCGGGTCCCEEEEEETTTCCEE
T ss_pred CEEEEEeCCCEEEEEECCCC---CEEEEecCCCCCccceeccCCEEE-CC--EEEEEecCCccCCCCEEEEEECCCCcEE
Confidence 37788888999999998876 4433322111 01111 1111 33 5666654 799999999999988
Q ss_pred EEeeccccc--------------------------------------eEEEEEecCCCCeEEEEeCC-------------
Q 021121 143 RTFKEHAYC--------------------------------------VYNATWNPRHSDVFCSASGD------------- 171 (317)
Q Consensus 143 ~~~~~~~~~--------------------------------------v~~~~~~~~~~~~l~~~~~d------------- 171 (317)
.++...... ...+++.+. ..+++.+..+
T Consensus 190 W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~-~g~vy~~~g~~~~~~~~~~~gd~ 268 (571)
T 2ad6_A 190 WRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPK-LNLFYYGSGNPAPWNETMRPGDN 268 (571)
T ss_dssp EEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETT-TTEEEEECCCCSCSCGGGSCSCC
T ss_pred EEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCC-CCeEEEECCCCccccCCccCCCc
Confidence 776532110 013556666 4555555432
Q ss_pred ---CeEEEEeCCCCCceeeeccC--c--------cceEEEEecCCCC---cEEEEEecCCcEEEEEccCCCccEEEEecC
Q 021121 172 ---CTLRIWDVREMGSTMIIPAH--E--------FEILACDWNKYDD---CLIASASVDKSIKIWDVRNYRVPIAVLNGH 235 (317)
Q Consensus 172 ---g~i~i~d~~~~~~~~~~~~~--~--------~~v~~i~~~~~~~---~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~ 235 (317)
+.|..+|.++++.+-.++.. . .++. +...+ ++ ..++.++.+|.++++|.++++. +......
T Consensus 269 ~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~-~G~~~~~v~~~~~~G~l~~lD~~tG~~-~w~~~~~ 345 (571)
T 2ad6_A 269 KWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPV-NGKMTPLLSHIDRNGILYTLNRENGNL-IVAEKVD 345 (571)
T ss_dssp TTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEE-TTEEEEEEEEECTTSEEEEEETTTCCE-EEEEESS
T ss_pred eeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEE-Eeccc-CCcEEEEEEEeCCCcEEEEEECCCCCE-Eeeeccc
Confidence 36999999999887766532 1 1221 22223 45 3677888899999999988774 3332211
Q ss_pred C-------------Cce--------------------------eEEEecCCCCeeEEeee--------------------
Q 021121 236 G-------------YAV--------------------------RKVKFSPHRRNLLASCS-------------------- 256 (317)
Q Consensus 236 ~-------------~~v--------------------------~~~~~~~~~~~~l~~~~-------------------- 256 (317)
. .++ ..++++|+.. +++...
T Consensus 346 ~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g-~~yv~~~~~~~~~~~~~~~~~~g~~~ 424 (571)
T 2ad6_A 346 PAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESR-TLYAGLNHICMDWEPFMLPYRAGQFF 424 (571)
T ss_dssp TTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTT-EEEEEEECEEEEEEECCCCCCTTSCC
T ss_pred CCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCC-EEEEEchhccccccccccccccCCcc
Confidence 1 111 2467888776 444432
Q ss_pred -----------------cCCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEeecCCcEEEEecCCCC
Q 021121 257 -----------------YDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGMDP 314 (317)
Q Consensus 257 -----------------~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~ 314 (317)
.+|.|..||..+++..- +... ...+.+...... +.+++.++.||.|+.||..+.+
T Consensus 425 ~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W-~~~~-~~~~~~~~~~t~-gg~v~~g~~dg~l~a~D~~tG~ 496 (571)
T 2ad6_A 425 VGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKW-TKWE-KFAAWGGTLYTK-GGLVWYATLDGYLKALDNKDGK 496 (571)
T ss_dssp CCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEE-EEEE-SSCCCSBCEEET-TTEEEEECTTSEEEEEETTTCC
T ss_pred ccccceeccCccccCCCCCCeEEEEECCCCCEEE-EecC-CCCccceeEEEC-CCEEEEEcCCCeEEEEECCCCC
Confidence 35789999999887433 3322 223333344444 5677778999999999987654
No 281
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.90 E-value=9.4e-06 Score=70.92 Aligned_cols=230 Identities=10% Similarity=-0.009 Sum_probs=136.0
Q ss_pred CeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCc----ceE-EEEEecC---CCCEEEEEc------CCCEEEEEEcCCC
Q 021121 74 SLLIAAVADGSVKIYDTALPPTANPIRSLHEHTR----EVH-SADYNPT---RRDSFITSS------WDDTVKLWTVDRP 139 (317)
Q Consensus 74 ~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~----~v~-~~~~~~~---~~~~l~~~~------~dg~v~iwd~~~~ 139 (317)
..++.++.++.|.-+|.+++ +.+........ .+. ......+ ++..+++++ .+|.|..+|.+++
T Consensus 118 ~~v~~~t~dg~l~AlD~~TG---~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG 194 (582)
T 1flg_A 118 DKVFFGTLDASVVALNKNTG---KVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTG 194 (582)
T ss_dssp TEEEEEETTTEEEEEESSSC---CEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTC
T ss_pred CEEEEEeCCCEEEEEECCCC---CEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCC
Confidence 36788888999999998877 44333321110 111 1111111 221455554 3789999999999
Q ss_pred ceeEEeeccccce-----------------------------------------EEEEEecCCCCeEEEEeC--------
Q 021121 140 TSVRTFKEHAYCV-----------------------------------------YNATWNPRHSDVFCSASG-------- 170 (317)
Q Consensus 140 ~~~~~~~~~~~~v-----------------------------------------~~~~~~~~~~~~l~~~~~-------- 170 (317)
+.+.........+ ..+++.|. ..+++.+..
T Consensus 195 ~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~-~g~vyv~~gn~~~~~~~ 273 (582)
T 1flg_A 195 EEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAE-TNTIIVGAGNPGPWNTW 273 (582)
T ss_dssp CEEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETT-TTEEEEEECCBSSSCGG
T ss_pred CEEeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCC-CCEEEEeCCCCCcccCc
Confidence 8877654211000 12456666 556665552
Q ss_pred ------------C----CeEEEEeCCCCCceeeecc--Cc--------cceEEEEec-CCCC---cEEEEEecCCcEEEE
Q 021121 171 ------------D----CTLRIWDVREMGSTMIIPA--HE--------FEILACDWN-KYDD---CLIASASVDKSIKIW 220 (317)
Q Consensus 171 ------------d----g~i~i~d~~~~~~~~~~~~--~~--------~~v~~i~~~-~~~~---~~l~~~~~d~~i~v~ 220 (317)
| +.|.-+|.++++.+-.++. |. .++. +... . ++ ..++.++.+|.++++
T Consensus 274 ~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~-~G~~~~~v~~~~~~G~l~~l 351 (582)
T 1flg_A 274 ARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAK-DGKIVKATAHADRNGFFYVV 351 (582)
T ss_dssp GGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECS-SSCEEEEEEEECTTSEEEEE
T ss_pred ccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecC-CCCEEEEEEEECCCceEEEE
Confidence 2 6899999999998877653 21 1221 1221 2 45 478889999999999
Q ss_pred EccCCCccEEEEecCC-------------Cc--------------------------------eeEEEecCCCCeeEEee
Q 021121 221 DVRNYRVPIAVLNGHG-------------YA--------------------------------VRKVKFSPHRRNLLASC 255 (317)
Q Consensus 221 d~~~~~~~~~~~~~~~-------------~~--------------------------------v~~~~~~~~~~~~l~~~ 255 (317)
|.++++. +....... .+ -..++++|+.. ++++.
T Consensus 352 D~~tG~~-lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g-~~yv~ 429 (582)
T 1flg_A 352 DRSNGKL-QNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTG-LFYVP 429 (582)
T ss_dssp ETTTCCE-EEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTC-CEEEE
T ss_pred ECCCCCE-ecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCC-EEEEe
Confidence 9988764 33322111 00 01356677665 34332
Q ss_pred e---------------------------------cCCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEeecC
Q 021121 256 S---------------------------------YDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWD 302 (317)
Q Consensus 256 ~---------------------------------~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d 302 (317)
. .+|.|..||+.+++..-+. .. ..++..-..... +.+++.++.|
T Consensus 430 ~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~-~~-~~~~~~g~~~ta-gglvf~g~~d 506 (582)
T 1flg_A 430 ANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEH-KE-HLPLWAGVLATA-GNLVFTGTGD 506 (582)
T ss_dssp EECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEE-EE-SSCCCSCCEEET-TTEEEEECTT
T ss_pred chhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEe-cC-CCCCcccceEeC-CCEEEEECCC
Confidence 2 2578999999998744332 22 122332223333 5688889999
Q ss_pred CcEEEEecCCCC
Q 021121 303 ELVYVWQQGMDP 314 (317)
Q Consensus 303 g~i~~w~~~~~~ 314 (317)
|.++.||..+.+
T Consensus 507 g~l~A~D~~tG~ 518 (582)
T 1flg_A 507 GYFKAFDAKSGK 518 (582)
T ss_dssp SEEEEEETTTCC
T ss_pred CcEEEEECCCCC
Confidence 999999987764
No 282
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.87 E-value=6.3e-06 Score=69.28 Aligned_cols=237 Identities=8% Similarity=0.015 Sum_probs=138.4
Q ss_pred CeeEEEecC-CCCCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcC-CC----EEEEEE
Q 021121 62 GVYDLAWSE-SHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSW-DD----TVKLWT 135 (317)
Q Consensus 62 ~v~~~~~~~-~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-dg----~v~iwd 135 (317)
....++++| ++ ..|.++...+.|+.+|+... .+..+.........++|+++++ .|+.+.. ++ .+..++
T Consensus 138 ~P~~lavdp~~~-g~Lyv~d~~~~I~~id~~~~----~v~~~~~~~~~P~~ia~d~~G~-~lyvad~~~~~~~~~v~~~~ 211 (430)
T 3tc9_A 138 GAVWLSFDPKNH-NHLYLVGEQHPTRLIDFEKE----YVSTVYSGLSKVRTICWTHEAD-SMIITNDQNNNDRPNNYILT 211 (430)
T ss_dssp CCCEEEEETTEE-EEEEEEEBTEEEEEEETTTT----EEEEEECCCSCEEEEEECTTSS-EEEEEECCSCTTSEEEEEEE
T ss_pred CCCEEEECCCCC-CeEEEEeCCCcEEEEECCCC----EEEEEecCCCCcceEEEeCCCC-EEEEEeCCCCcccceEEEEe
Confidence 356788887 34 34555555578888887643 2333333455688999999987 5555543 22 344445
Q ss_pred cCCCcee--EEeeccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeecc-CccceEEEEecCCCCc-EEEEE
Q 021121 136 VDRPTSV--RTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPA-HEFEILACDWNKYDDC-LIASA 211 (317)
Q Consensus 136 ~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~v~~i~~~~~~~~-~l~~~ 211 (317)
.. +... ..+.. ......++++|+++.++++-..++.|..++...+........ .......++++| +++ ++++-
T Consensus 212 ~~-g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~p-dG~~lyv~d 288 (430)
T 3tc9_A 212 RE-SGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHP-SGNYAYIVV 288 (430)
T ss_dssp GG-GTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECT-TSSEEEEEE
T ss_pred CC-Cceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcC-CCCEEEEEE
Confidence 43 3222 22322 234678899995477777777788999999876543222221 223467899999 887 55555
Q ss_pred ecCCcEEEEEccCCCcc---EEEEecC---------------CCcee-EEEec--------CCCCeeEEeeecCCeEEEE
Q 021121 212 SVDKSIKIWDVRNYRVP---IAVLNGH---------------GYAVR-KVKFS--------PHRRNLLASCSYDMTVCLW 264 (317)
Q Consensus 212 ~~d~~i~v~d~~~~~~~---~~~~~~~---------------~~~v~-~~~~~--------~~~~~~l~~~~~d~~i~vw 264 (317)
...+.|..++....... ...+.+. -.... .++.. +++. ++++=...+.|+.+
T Consensus 289 ~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~-lyvaD~~n~~I~~i 367 (430)
T 3tc9_A 289 VNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYD-FYFCDRENHCIRIL 367 (430)
T ss_dssp TTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEE-EEEEEGGGTEEEEE
T ss_pred CCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCe-EEEEECCCcEEEEE
Confidence 66788999887642110 1112111 00122 44443 2343 45554556788888
Q ss_pred ecccccceeeeeecc------------------cceeEeEEEEeccCCeEEEeecCCcEEEEecC
Q 021121 265 DFMVEDALVGRYDHH------------------TEFAVGVDMSVLVEGLLASTGWDELVYVWQQG 311 (317)
Q Consensus 265 d~~~~~~~~~~~~~~------------------~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~ 311 (317)
+. ++. + ..+.+. -.....++++|+++.++++-...+.|+.++++
T Consensus 368 ~~-~G~-v-~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 368 TP-QGR-V-TTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp CT-TSE-E-EEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CC-CCc-E-EEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 83 332 2 222211 11468899998535666666667888887764
No 283
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.86 E-value=1.4e-05 Score=72.10 Aligned_cols=227 Identities=9% Similarity=0.003 Sum_probs=137.8
Q ss_pred eEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCC----ceeEEeecccc
Q 021121 75 LLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRP----TSVRTFKEHAY 150 (317)
Q Consensus 75 ~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~----~~~~~~~~~~~ 150 (317)
+|+... ...|+..++... . ...+......+..++|.+....++++-...+.|+.+++... .....+.....
T Consensus 397 ~Ll~an-~~~Ir~i~l~~~---~-~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~ 471 (791)
T 3m0c_C 397 YLFFTN-RHEVRKMTLDRS---E-YTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQ 471 (791)
T ss_dssp EEEEEC-BSSEEEECTTSC---C-CEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCS
T ss_pred cccccc-ccceeEeeccCC---c-ceeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCC
Confidence 444443 455777776643 2 22233345667899999866646666667789999998753 22233333445
Q ss_pred ceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEecC-CcEEEEEccCCCccE
Q 021121 151 CVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVD-KSIKIWDVRNYRVPI 229 (317)
Q Consensus 151 ~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d-~~i~v~d~~~~~~~~ 229 (317)
.+..|++.+.+++++++-...+.|.+.++........+.........|+++|..+.++++-... +.|.+.++..... .
T Consensus 472 ~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~-~ 550 (791)
T 3m0c_C 472 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-Y 550 (791)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE-E
T ss_pred CcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCce-E
Confidence 6788999988567777777889999999875543333333344578999999446565554333 6788888875432 3
Q ss_pred EEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeecc--cceeEeEEEEeccCCeEEEeecCCcEEE
Q 021121 230 AVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHH--TEFAVGVDMSVLVEGLLASTGWDELVYV 307 (317)
Q Consensus 230 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~l~s~~~dg~i~~ 307 (317)
......-.....|++++.+..++++=...+.|...++.... ........ -....+|++.. +.++++-...+.|..
T Consensus 551 ~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~-~~~v~~~~~~l~~P~glav~~--~~lYwtD~~~~~I~~ 627 (791)
T 3m0c_C 551 SLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAVFE--DKVFWTDIINEAIFS 627 (791)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEEECTTTTSSEEEEEEET--TEEEEEETTTTEEEE
T ss_pred EEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCc-eEEEecCCCccCCCCEEEEeC--CEEEEEECCCCEEEE
Confidence 33333335678999998777555555566789999986543 22222221 12234565532 445555555666766
Q ss_pred Eec
Q 021121 308 WQQ 310 (317)
Q Consensus 308 w~~ 310 (317)
.+.
T Consensus 628 ~dk 630 (791)
T 3m0c_C 628 ANR 630 (791)
T ss_dssp EET
T ss_pred EeC
Confidence 654
No 284
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.82 E-value=1.8e-05 Score=66.59 Aligned_cols=241 Identities=10% Similarity=0.137 Sum_probs=134.8
Q ss_pred ceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCC----e
Q 021121 9 NGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADG----S 84 (317)
Q Consensus 9 ~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg----~ 84 (317)
.+..++++|..++.+.++.. .+.|+.+|++... +..+. ........++|++++..++++...++ .
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~-------~~~I~~id~~~~~--v~~~~--~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~ 206 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGE-------QHPTRLIDFEKEY--VSTVY--SGLSKVRTICWTHEADSMIITNDQNNNDRPN 206 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEB-------TEEEEEEETTTTE--EEEEE--CCCSCEEEEEECTTSSEEEEEECCSCTTSEE
T ss_pred CCCEEEECCCCCCeEEEEeC-------CCcEEEEECCCCE--EEEEe--cCCCCcceEEEeCCCCEEEEEeCCCCcccce
Confidence 45678888721355555543 3688889887643 22222 34456889999999843444443222 2
Q ss_pred EEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeec-cccceEEEEEecCCCC
Q 021121 85 VKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKE-HAYCVYNATWNPRHSD 163 (317)
Q Consensus 85 i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~ 163 (317)
+..++.. + .......+.. ......++++|++..++++-..++.|..++..++........ .......++|+|+ ++
T Consensus 207 v~~~~~~-g-~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pd-G~ 282 (430)
T 3tc9_A 207 NYILTRE-S-GFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPS-GN 282 (430)
T ss_dssp EEEEEGG-G-TSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTT-SS
T ss_pred EEEEeCC-C-ceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCC-CC
Confidence 3334432 2 1111122221 234567889994343677777789999999987654222221 2245789999999 66
Q ss_pred -eEEEEeCCCeEEEEeCCCC--Cc--eeeeccC---------------ccceE-EEEecC-------CCCcEEEEEecCC
Q 021121 164 -VFCSASGDCTLRIWDVREM--GS--TMIIPAH---------------EFEIL-ACDWNK-------YDDCLIASASVDK 215 (317)
Q Consensus 164 -~l~~~~~dg~i~i~d~~~~--~~--~~~~~~~---------------~~~v~-~i~~~~-------~~~~~l~~~~~d~ 215 (317)
++++-...+.|..++.... +. ...+.+. -.... .++..+ .++.++++-...+
T Consensus 283 ~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~ 362 (430)
T 3tc9_A 283 YAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENH 362 (430)
T ss_dssp EEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGT
T ss_pred EEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCc
Confidence 6666667888999887532 11 1111111 00122 344421 1456666666667
Q ss_pred cEEEEEccCCCccEEEEecC------------------CCceeEEEecCCCCeeEEeeecCCeEEEEecc
Q 021121 216 SIKIWDVRNYRVPIAVLNGH------------------GYAVRKVKFSPHRRNLLASCSYDMTVCLWDFM 267 (317)
Q Consensus 216 ~i~v~d~~~~~~~~~~~~~~------------------~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~ 267 (317)
.|+.++. ++. +..+.+. -.....++++|++..++++-..+..|+.++++
T Consensus 363 ~I~~i~~-~G~--v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 363 CIRILTP-QGR--VTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp EEEEECT-TSE--EEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EEEEECC-CCc--EEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 8888883 332 3333221 01467888888544456655566777777653
No 285
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.80 E-value=1.6e-05 Score=66.78 Aligned_cols=239 Identities=7% Similarity=0.004 Sum_probs=140.8
Q ss_pred CeeEEEecCC-CCCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCC---C-EEEEEEc
Q 021121 62 GVYDLAWSES-HDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWD---D-TVKLWTV 136 (317)
Q Consensus 62 ~v~~~~~~~~-~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d---g-~v~iwd~ 136 (317)
....++|.|+ ....|..+...+.|+.++...+ .+..+.........+++++++. ++++.... . .+...+.
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g----~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~ 214 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQ----YVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTR 214 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTT----EEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECG
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCC----EEEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEEC
Confidence 3568899985 1234555544478999987543 2333333455688999999998 66665421 1 2333443
Q ss_pred CCCcee-EEeeccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeee-cc-CccceEEEEecCCCCc-EEEEEe
Q 021121 137 DRPTSV-RTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMII-PA-HEFEILACDWNKYDDC-LIASAS 212 (317)
Q Consensus 137 ~~~~~~-~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~-~~~~v~~i~~~~~~~~-~l~~~~ 212 (317)
..+... ..+. .-.....++++|+++.++++-..++.|+.+|..++.....+ .. .......++++| +++ ++++-.
T Consensus 215 ~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dp-dG~~LYvad~ 292 (433)
T 4hw6_A 215 ASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHP-TGDWAYIIYN 292 (433)
T ss_dssp GGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECT-TSSEEEEEET
T ss_pred CCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeC-CCCEEEEEeC
Confidence 322211 1222 23346778999954777777777889999998866552222 11 112234699999 777 555555
Q ss_pred cCCcEEEEEccCCCcc---EEEEecC---------------CCceeEEEe---------cCCCCeeEEeeecCCeEEEEe
Q 021121 213 VDKSIKIWDVRNYRVP---IAVLNGH---------------GYAVRKVKF---------SPHRRNLLASCSYDMTVCLWD 265 (317)
Q Consensus 213 ~d~~i~v~d~~~~~~~---~~~~~~~---------------~~~v~~~~~---------~~~~~~~l~~~~~d~~i~vwd 265 (317)
..+.|+.++....... ...+.+. -.....+++ .+++. ++++-...+.|+.++
T Consensus 293 ~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~-lyvaD~~n~~I~~~~ 371 (433)
T 4hw6_A 293 GKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYD-FYFCDRDSHTVRVLT 371 (433)
T ss_dssp TTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEE-EEEEETTTTEEEEEC
T ss_pred CCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCc-EEEEECCCCEEEEEC
Confidence 6788999886532110 1122111 123567898 66665 566656678899988
Q ss_pred cccccceeeeeecc------------------cceeEeEEEEeccCCeEEEeecCCcEEEEecC
Q 021121 266 FMVEDALVGRYDHH------------------TEFAVGVDMSVLVEGLLASTGWDELVYVWQQG 311 (317)
Q Consensus 266 ~~~~~~~~~~~~~~------------------~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~ 311 (317)
. ++. + ..+.+. -....+|+++|..+.++++=...+.|+..+++
T Consensus 372 ~-~G~-v-~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 372 P-EGR-V-TTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp T-TSE-E-EEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred C-CCC-E-EEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 5 332 2 222211 12367899995436666666677888888764
No 286
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.79 E-value=6.3e-08 Score=86.42 Aligned_cols=228 Identities=10% Similarity=0.013 Sum_probs=133.6
Q ss_pred CceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCC-CCCceeeccCCcceEEEEE
Q 021121 36 NGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPT-ANPIRSLHEHTREVHSADY 114 (317)
Q Consensus 36 ~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~-~~~~~~~~~~~~~v~~~~~ 114 (317)
.+.|+..++.... ...+ ......+..++|.+.+..++++-...+.|+.+++..... ......+.........|++
T Consensus 385 ~~~I~~id~~~~~--~~~~--~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glav 460 (699)
T 1n7d_A 385 RHEVRKMTLDRSE--YTSL--IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAV 460 (699)
T ss_dssp TTC-CEECTTSCC--EECC--SCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEEC
T ss_pred ccceEEEeCCCCc--ceee--eccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEE
Confidence 4477777776543 1111 123345678999987654555545567899998864100 0111111111223456788
Q ss_pred ecCCCCEEEEEcCCCEEEEEEcCCCceeEEeeccccceEEEEEecCCCCeEEEEeCC-CeEEEEeCCCCCceeeeccCcc
Q 021121 115 NPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGD-CTLRIWDVREMGSTMIIPAHEF 193 (317)
Q Consensus 115 ~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-g~i~i~d~~~~~~~~~~~~~~~ 193 (317)
.+.+..++++-...+.|.++++........+.........+++.|.++.++++-... +.|..+++........+...-.
T Consensus 461 D~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~ 540 (699)
T 1n7d_A 461 DWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQ 540 (699)
T ss_dssp CCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCS
T ss_pred EeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCC
Confidence 765553566656678999999876544333333334578899999756666554333 7888888764332222222223
Q ss_pred ceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEec--CCCceeEEEecCCCCeeEEeeecCCeEEEEeccccc
Q 021121 194 EILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNG--HGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVED 270 (317)
Q Consensus 194 ~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~ 270 (317)
..+.|+++|..+.++++-...+.|.++|+..... ...+.. .......|++..+ +++++....+.|..++..+++
T Consensus 541 ~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~-~~~~~~~~~~~~P~glavd~~--~lywtd~~~~~V~~~d~~~G~ 616 (699)
T 1n7d_A 541 WPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVFED--KVFWTDIINEAIFSANRLTGS 616 (699)
T ss_dssp SCCCEEECTTTCCEEEEETTTTEEEEECSSSSCC-EEECCCSSSCSSCCCCEEETT--EEEEECSTTTCEEEEETTTEE
T ss_pred CccEEEEeccCCEEEEEecCCCeEEEEccCCCce-EEEEecCCcCCCceEeEEECC--EEEEEeCCCCeEEEEEccCCC
Confidence 4578999985566777766778899999875332 222221 1123345666543 467777777889999876665
No 287
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.78 E-value=7.1e-05 Score=65.94 Aligned_cols=228 Identities=6% Similarity=-0.037 Sum_probs=145.7
Q ss_pred eEEEEEcCCeEEEEEeCCCCCCCCceeec-cCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeeccccceE
Q 021121 75 LLIAAVADGSVKIYDTALPPTANPIRSLH-EHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVY 153 (317)
Q Consensus 75 ~l~~~~~dg~i~v~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~ 153 (317)
+|+.+ ....|+..+++.. .....+. ..-..+..++|.+.+..++.+-..++.|..++++.......+......+.
T Consensus 8 ~Ll~s-~~~~I~~i~l~~~---~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~ 83 (628)
T 4a0p_A 8 FLLFS-RRADIRRISLETN---NNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPE 83 (628)
T ss_dssp EEEEE-ETTEEEEEESSCT---TCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCC
T ss_pred EEEEE-eCCcEEEEECCCC---CcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcc
Confidence 44444 5678999998754 2111111 12346789999997764666667789999999876544444433334578
Q ss_pred EEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEEEEE-ecCCcEEEEEccCCCccEEEE
Q 021121 154 NATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASA-SVDKSIKIWDVRNYRVPIAVL 232 (317)
Q Consensus 154 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~ 232 (317)
.+++.+.++++.++-...+.|.+.++........+...-.....++++|..+.++++- +..+.|...++..... ....
T Consensus 84 GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~-~~l~ 162 (628)
T 4a0p_A 84 GMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER-TTLV 162 (628)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EEEE
T ss_pred eEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce-EEEE
Confidence 8999887567777777788999999875443333323334568999998556555554 2256788888765442 2223
Q ss_pred ecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEeecCCcEEEEecCC
Q 021121 233 NGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGM 312 (317)
Q Consensus 233 ~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~ 312 (317)
..-.....|+++++++.+.++=...+.|...|+..... ..+...-....++++.. +.++++-...+.|...|..+
T Consensus 163 -~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~--~v~~~~l~~P~glav~~--~~ly~tD~~~~~I~~~dk~t 237 (628)
T 4a0p_A 163 -PNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR--EVIADDLPHPFGLTQYQ--DYIYWTDWSRRSIERANKTS 237 (628)
T ss_dssp -CSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC--EEEEECCSCEEEEEEET--TEEEEEETTTTEEEEEETTT
T ss_pred -CCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce--EEeeccCCCceEEEEEC--CEEEEecCCCCEEEEEECCC
Confidence 33456789999998776666666778899999876542 22222233345777753 44555555577787777543
No 288
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.78 E-value=1.3e-05 Score=67.75 Aligned_cols=240 Identities=12% Similarity=-0.008 Sum_probs=140.8
Q ss_pred eeEEEecCC-CCCeEEEEEcCCeEEEEEeCCCCCCCCceeec-c---CCcceEEEEE-------ecCCCCEEEEEcCCC-
Q 021121 63 VYDLAWSES-HDSLLIAAVADGSVKIYDTALPPTANPIRSLH-E---HTREVHSADY-------NPTRRDSFITSSWDD- 129 (317)
Q Consensus 63 v~~~~~~~~-~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~-~---~~~~v~~~~~-------~~~~~~~l~~~~~dg- 129 (317)
...|+|.|. +.+++++-...+.|++.|++.. .+..+. . .......++| ++++. .|+++...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~----~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~-~lyvad~~~~ 215 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNR----MLSSPLNINTIPTNRIRSIAFNKKIEGYADEAE-YMIVAIDYDG 215 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTT----EEEEEECCTTSSCSBEEEEEECCCBTTTBCTTC-EEEEEECCCT
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCC----EEEEEEccCccccCCCcEEEEeecccccCCCCC-EEEEEeCCCC
Confidence 567899983 4345555444467888887653 222221 1 2235889999 99987 555554433
Q ss_pred ------EEEEEEcCC-Ccee-----EEeeccccceEEEEEecCCCCeEEEEeCCCeEEEEeCC-------CCCc------
Q 021121 130 ------TVKLWTVDR-PTSV-----RTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVR-------EMGS------ 184 (317)
Q Consensus 130 ------~v~iwd~~~-~~~~-----~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~-------~~~~------ 184 (317)
.|.+++... +... ..+.. -.....++.+|+++.++++-..++.|..+|+. ++..
T Consensus 216 ~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~ 294 (496)
T 3kya_A 216 KGDESPSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVK 294 (496)
T ss_dssp TGGGEEEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGG
T ss_pred CcccCceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccc
Confidence 366666443 2221 22322 22456788999767888888888999999997 5543
Q ss_pred -----eee-ec-cCccceEEEEecCCCCcE-EEEEecCCcEEEEEccCCCccE---EEEecC---C------------Cc
Q 021121 185 -----TMI-IP-AHEFEILACDWNKYDDCL-IASASVDKSIKIWDVRNYRVPI---AVLNGH---G------------YA 238 (317)
Q Consensus 185 -----~~~-~~-~~~~~v~~i~~~~~~~~~-l~~~~~d~~i~v~d~~~~~~~~---~~~~~~---~------------~~ 238 (317)
... +. ........++++| +++. +++-.....|+.++.......+ ..+.+. . ..
T Consensus 295 ~~~g~~~~l~~~~~~~~p~~ia~~p-~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~ 373 (496)
T 3kya_A 295 NNPNTFKQLFTIADPSWEFQIFIHP-TGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNN 373 (496)
T ss_dssp GCTTTEEEEEECSSSSCCEEEEECT-TSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSS
T ss_pred ccccccceeEecCCCCCceEEEEcC-CCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCC
Confidence 111 11 1223457899999 8874 5555567789997765322111 122211 0 12
Q ss_pred ee-EEEec-------CCCCeeEEeeecCCeEEEEecccccceeeeeecc------------------------cceeEeE
Q 021121 239 VR-KVKFS-------PHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHH------------------------TEFAVGV 286 (317)
Q Consensus 239 v~-~~~~~-------~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~------------------------~~~v~~~ 286 (317)
.. .++.. +++. ++++=..+..|+.++. ++. +..+.+. -....+|
T Consensus 374 P~~gv~vd~~~~~~~~~g~-lyVaD~~N~rIr~i~~-~G~--v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gI 449 (496)
T 3kya_A 374 PCQGVFVKNPDYTGEEEYD-FYFVDRLNFCVRKVTP-EGI--VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGL 449 (496)
T ss_dssp EEEEEEEECTTCCSSCCEE-EEEEEGGGTEEEEECT-TCB--EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEE
T ss_pred CeEEEEEccccccccCCCe-EEEEECCCCEEEEEeC-CCC--EEEEecccccccccCccccccCCCCchhhhhcCCCcEE
Confidence 33 34443 3444 5666566788999883 332 2233221 1235689
Q ss_pred EEEeccCCeEEEeecCCcEEEEecCCC
Q 021121 287 DMSVLVEGLLASTGWDELVYVWQQGMD 313 (317)
Q Consensus 287 ~~~~~~~~~l~s~~~dg~i~~w~~~~~ 313 (317)
+++++++.++++=.....|+.++++.+
T Consensus 450 avd~~~g~lyVaD~~N~rIrki~~~~~ 476 (496)
T 3kya_A 450 VYDDVKEMFYVHDQVGHTIRTISMEQE 476 (496)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEECCC
T ss_pred EEECCCCEEEEEeCCCCEEEEEECCCC
Confidence 999853556666667788999988764
No 289
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.77 E-value=7.8e-05 Score=65.61 Aligned_cols=162 Identities=7% Similarity=0.025 Sum_probs=98.2
Q ss_pred cceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeEEE
Q 021121 8 FNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKI 87 (317)
Q Consensus 8 ~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v 87 (317)
..+.+++|++. ++.+..+-.. .++|..++++.... ...+. ...-.....+++.+.+.++.++-...+.|.+
T Consensus 40 ~~~~~ld~~~~-~~~ly~sD~~------~~~I~r~~~~g~~~-~~~v~-~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v 110 (619)
T 3s94_A 40 EDAAAVDFVFS-HGLIYWSDVS------EEAIKRTEFNKTES-VQNVV-VSGLLSPDGLACDWLGEKLYWTDSETNRIEV 110 (619)
T ss_dssp SCEEEEEEETT-TTEEEEEETT------TTEEEEEEC------CEEEE-CSSCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CceEEEEEEeC-CCEEEEEECC------CCeEEEEEccCCCc-eEEEE-eCCCCCcCeEEEEecCCEEEEEeCCCCEEEE
Confidence 35678889985 4555555443 67888888875421 11121 1222468889999876566666667789999
Q ss_pred EEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEE-cCCCEEEEEEcCCCceeEEeeccccceEEEEEecCCCCeEE
Q 021121 88 YDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITS-SWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFC 166 (317)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~-~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 166 (317)
.+++.. .........-.....|++.|.+..++++- +..+.|...+++...........-...+.++++++++.+.+
T Consensus 111 ~~~dG~---~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~ 187 (619)
T 3s94_A 111 SNLDGS---LRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYW 187 (619)
T ss_dssp EETTSC---SCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEE
T ss_pred EECCCC---CEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEE
Confidence 998643 22122223344567899998766244443 22467888887644333333333456889999987566665
Q ss_pred EEeCCCeEEEEeCCC
Q 021121 167 SASGDCTLRIWDVRE 181 (317)
Q Consensus 167 ~~~~dg~i~i~d~~~ 181 (317)
+-...+.|..+|+..
T Consensus 188 aD~~~~~I~~~~~dG 202 (619)
T 3s94_A 188 ADAKLNFIHKSNLDG 202 (619)
T ss_dssp EETTTCCEEEESSSC
T ss_pred EeCCCCeEEEecCCC
Confidence 655667788887754
No 290
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.75 E-value=4.5e-05 Score=61.62 Aligned_cols=274 Identities=7% Similarity=-0.052 Sum_probs=143.8
Q ss_pred CcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeee--cCCCCeeEEEecCCCCCeEEEEEcCCe
Q 021121 7 PFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAF--DTADGVYDLAWSESHDSLLIAAVADGS 84 (317)
Q Consensus 7 ~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~dg~ 84 (317)
...+.++.|.+ ++...+++. .|.| |.........+.+... .....+.++.|.+ + ..+++ +..+.
T Consensus 35 ~~~~~~v~~~~--~~~~~~~G~-------~g~i--~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~-~~~~~-g~~g~ 100 (327)
T 2xbg_A 35 TATILDMSFID--RHHGWLVGV-------NATL--METRDGGQTWEPRTLVLDHSDYRFNSVSFQG-N-EGWIV-GEPPI 100 (327)
T ss_dssp SSCEEEEEESS--SSCEEEEET-------TTEE--EEESSTTSSCEECCCCCSCCCCEEEEEEEET-T-EEEEE-EETTE
T ss_pred CCcEEEEEECC--CCcEEEEcC-------CCeE--EEeCCCCCCCeECCCCCCCCCccEEEEEecC-C-eEEEE-ECCCe
Confidence 45688888876 455555443 5554 3333333223333211 1234688999986 3 34444 45664
Q ss_pred EEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEe-eccccceEEEEEecCCCC
Q 021121 85 VKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTF-KEHAYCVYNATWNPRHSD 163 (317)
Q Consensus 85 i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~ 163 (317)
|.. ..+.++..+.+.....+...+..+.+.+++. .++++ .+|.|.. ..+.++.-... ......+..+.+.|+ +.
T Consensus 101 i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~-~~~~~-~~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~~-~~ 175 (327)
T 2xbg_A 101 MLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGS-AEMIT-NVGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSPS-GE 175 (327)
T ss_dssp EEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTE-EEEEE-TTCCEEE-ESSTTSSEEEEECSCCCCEEEEEECTT-SC
T ss_pred EEE-ECCCCCCceECccccCCCCCeEEEEEECCCC-EEEEe-CCccEEE-EcCCCCCCEEeecCCCcceEEEEEcCC-Cc
Confidence 433 2232323333222212345577888777665 55554 4564432 22234333322 234456889999987 66
Q ss_pred eEEEEeCCCeEEE-EeCCCCCceeee-ccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEe----cCCC
Q 021121 164 VFCSASGDCTLRI-WDVREMGSTMII-PAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLN----GHGY 237 (317)
Q Consensus 164 ~l~~~~~dg~i~i-~d~~~~~~~~~~-~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~----~~~~ 237 (317)
+++.+. +|.+.. .|- .++.-..+ ......+..+.+.+ ++.+++. +.+|.+++.+...++. ..... .+..
T Consensus 176 ~~~~g~-~G~~~~S~d~-gG~tW~~~~~~~~~~~~~~~~~~-~g~~~~~-~~~G~~~~s~~D~G~t-W~~~~~~~~~~~~ 250 (327)
T 2xbg_A 176 YVAVSS-RGSFYSTWEP-GQTAWEPHNRTTSRRLHNMGFTP-DGRLWMI-VNGGKIAFSDPDNSEN-WGELLSPLRRNSV 250 (327)
T ss_dssp EEEEET-TSSEEEEECT-TCSSCEEEECCSSSCEEEEEECT-TSCEEEE-ETTTEEEEEETTEEEE-ECCCBCTTSSCCS
T ss_pred EEEEEC-CCcEEEEeCC-CCCceeECCCCCCCccceeEECC-CCCEEEE-eCCceEEEecCCCCCe-eEeccCCcccCCc
Confidence 665554 455443 332 12222221 23445678888988 6766544 5578777764221111 11111 1223
Q ss_pred ceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeee---cccceeEeEEEEeccCCeEEEeecCCcEEEEec
Q 021121 238 AVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYD---HHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQ 310 (317)
Q Consensus 238 ~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~ 310 (317)
.+..+.+.+++. +++++ .+|.+ .+....++ ...... .....+..+.|.+ +..+++++.+|.|.-++-
T Consensus 251 ~~~~v~~~~~~~-~~~~g-~~g~i-~~S~DgG~-tW~~~~~~~~~~~~~~~v~~~~--~~~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 251 GFLDLAYRTPNE-VWLAG-GAGAL-LCSQDGGQ-TWQQDVDVKKVPSNFYKILFFS--PDQGFILGQKGILLRYVT 320 (327)
T ss_dssp CEEEEEESSSSC-EEEEE-STTCE-EEESSTTS-SCEECGGGTTSSSCCCEEEEEE--TTEEEEECSTTEEEEECC
T ss_pred ceEEEEecCCCE-EEEEe-CCCeE-EEeCCCCc-ccEEcCccCCCCCCeEEEEEEC--CCceEEEcCCceEEEEcC
Confidence 578899998776 55554 46766 33334343 222222 1235678888875 456777778997766653
No 291
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.72 E-value=1.1e-06 Score=78.20 Aligned_cols=240 Identities=7% Similarity=-0.083 Sum_probs=129.8
Q ss_pred eEEEecC-CCCCeEEEEEcCC-----------eEEEEEeCCCCCCCCceeecc-CCcceEEEEEecCCCCEEEEEc-CCC
Q 021121 64 YDLAWSE-SHDSLLIAAVADG-----------SVKIYDTALPPTANPIRSLHE-HTREVHSADYNPTRRDSFITSS-WDD 129 (317)
Q Consensus 64 ~~~~~~~-~~~~~l~~~~~dg-----------~i~v~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~-~dg 129 (317)
..+++.+ ++ .+++.|+.+. .+.+||..+. ....+..+.. +.....++++..++. +++.|+ .+.
T Consensus 189 ~~~av~~~~g-~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~-~w~~~~~~~~~~~~~~~~~~~~~~g~-lyv~GG~~~~ 265 (656)
T 1k3i_A 189 AAAAIEPTSG-RVLMWSSYRNDAFGGSPGGITLTSSWDPSTG-IVSDRTVTVTKHDMFCPGISMDGNGQ-IVVTGGNDAK 265 (656)
T ss_dssp SEEEEETTTT-EEEEEEECCCTTTCSCCCSEEEEEEECTTTC-CBCCCEEEECSCCCSSCEEEECTTSC-EEEECSSSTT
T ss_pred eeEEEEecCC-EEEEEecccccccccCCCCeEEEEEEeCCCC-cEEeCcccCCCCCCccccccCCCCCC-EEEeCCCCCC
Confidence 3566777 55 6778777542 5788888765 3333333322 233344567778887 788877 456
Q ss_pred EEEEEEcCCCceeEEeecccc-ceEEEEEecCCCCeEEEEe-CC-----CeEEEEeCCCCCceeeecc-----CccceEE
Q 021121 130 TVKLWTVDRPTSVRTFKEHAY-CVYNATWNPRHSDVFCSAS-GD-----CTLRIWDVREMGSTMIIPA-----HEFEILA 197 (317)
Q Consensus 130 ~v~iwd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~l~~~~-~d-----g~i~i~d~~~~~~~~~~~~-----~~~~v~~ 197 (317)
.+.+||..+.+-...-..+.. .-.+++..++ +++++.|+ .+ ..+.+||..+.+-.. +.. ....-..
T Consensus 266 ~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~d-g~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~-~~~~~~~p~~~~~~~ 343 (656)
T 1k3i_A 266 KTSLYDSSSDSWIPGPDMQVARGYQSSATMSD-GRVFTIGGSWSGGVFEKNGEVYSPSSKTWTS-LPNAKVNPMLTADKQ 343 (656)
T ss_dssp CEEEEEGGGTEEEECCCCSSCCSSCEEEECTT-SCEEEECCCCCSSSCCCCEEEEETTTTEEEE-ETTSCSGGGCCCCTT
T ss_pred ceEEecCcCCceeECCCCCccccccceEEecC-CeEEEEeCcccCCcccccceEeCCCCCccee-CCCcccccccccccc
Confidence 899999987643221111111 1133455566 78888888 34 468999998653221 110 0000001
Q ss_pred EEecCCCCcEEEEEecCC---------cEEEEEccCCCccEEEEecCC---------CceeEEEecCCCCeeEEeeecCC
Q 021121 198 CDWNKYDDCLIASASVDK---------SIKIWDVRNYRVPIAVLNGHG---------YAVRKVKFSPHRRNLLASCSYDM 259 (317)
Q Consensus 198 i~~~~~~~~~l~~~~~d~---------~i~v~d~~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~~l~~~~~d~ 259 (317)
..+.. ++..++.++.++ .+..||..+... ......+. ..-.++.|...+..+++.|+.++
T Consensus 344 ~~~~~-~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w-~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~ 421 (656)
T 1k3i_A 344 GLYRS-DNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGD-VKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPD 421 (656)
T ss_dssp GGGTT-TCSCCEEECGGGCEEECCSSSEEEEEECSTTCE-EEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSS
T ss_pred ceeec-CCceEEEECCCCcEEEecCccceeeeecCCcce-eecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCC
Confidence 11222 455556665444 467888876542 11111111 12234555443334788887543
Q ss_pred -----------eEEEEecccccceeeee--ecccce-eEeEEEEeccCCeEEEeecC-----------CcEEEEecCC
Q 021121 260 -----------TVCLWDFMVEDALVGRY--DHHTEF-AVGVDMSVLVEGLLASTGWD-----------ELVYVWQQGM 312 (317)
Q Consensus 260 -----------~i~vwd~~~~~~~~~~~--~~~~~~-v~~~~~~~~~~~~l~s~~~d-----------g~i~~w~~~~ 312 (317)
.+.+||..+..-. ... ..+... -.+++..|+ +++++.||.+ ..+.+||..+
T Consensus 422 ~~~~~~~~~~~~v~~yd~~~~~W~-~~~~~~mp~~R~~~~~~~l~~-g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t 497 (656)
T 1k3i_A 422 YQDSDATTNAHIITLGEPGTSPNT-VFASNGLYFARTFHTSVVLPD-GSTFITGGQRRGIPFEDSTPVFTPEIYVPEQ 497 (656)
T ss_dssp SSSSBCCCCEEEEECCSTTSCCEE-EECTTCCSSCCBSCEEEECTT-SCEEEECCBSBCCTTCCCSBCCCCEEEEGGG
T ss_pred CCCCCcCCcceEEEcCCCCCCCee-EEccCCCCCCcccCCeEECCC-CCEEEECCcccCcCcCCCCcccceEEEcCCC
Confidence 6888887765421 111 111111 223445566 7888888864 4678888754
No 292
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.71 E-value=6.2e-05 Score=63.69 Aligned_cols=246 Identities=11% Similarity=0.149 Sum_probs=141.7
Q ss_pred ceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeec--CCCCeeEEEe-------cCCCCCeEEEE
Q 021121 9 NGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFD--TADGVYDLAW-------SESHDSLLIAA 79 (317)
Q Consensus 9 ~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~--~~~~v~~~~~-------~~~~~~~l~~~ 79 (317)
....|+|+|...+.|.++... .+.|++.|++... +..+.... .......++| ++++. .|+++
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~------~~~i~~ID~~~~~--v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~-~lyva 210 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDG------HKAIQLIDLKNRM--LSSPLNINTIPTNRIRSIAFNKKIEGYADEAE-YMIVA 210 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEET------EEEEEEEETTTTE--EEEEECCTTSSCSBEEEEEECCCBTTTBCTTC-EEEEE
T ss_pred CCCEEEEccCCCCEEEEEECC------CCeEEEEECCCCE--EEEEEccCccccCCCcEEEEeecccccCCCCC-EEEEE
Confidence 467899998324555555543 4678888887654 33332221 1235889999 99985 45554
Q ss_pred EcCC-----e--EEEEEeCCCCCCCC---ceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcC-------CCce-
Q 021121 80 VADG-----S--VKIYDTALPPTANP---IRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVD-------RPTS- 141 (317)
Q Consensus 80 ~~dg-----~--i~v~~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~-------~~~~- 141 (317)
...+ . |.+++......... ...+.. -.....++++|++..++++-..++.|..+|++ ++..
T Consensus 211 d~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~ 289 (496)
T 3kya_A 211 IDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSW 289 (496)
T ss_dssp ECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCC
T ss_pred eCCCCCcccCceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceee
Confidence 4433 2 55555332111110 012221 12345678899666577788888999999998 5543
Q ss_pred ----------eEE-ee-ccccceEEEEEecCCCC-eEEEEeCCCeEEEEeCCCCC-ce---eeeccC---c---------
Q 021121 142 ----------VRT-FK-EHAYCVYNATWNPRHSD-VFCSASGDCTLRIWDVREMG-ST---MIIPAH---E--------- 192 (317)
Q Consensus 142 ----------~~~-~~-~~~~~v~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~-~~---~~~~~~---~--------- 192 (317)
... +. ........++|+|+ ++ ++++-+....|+.++..... .+ ..+.+. .
T Consensus 290 tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~-G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~ 368 (496)
T 3kya_A 290 DPIVKNNPNTFKQLFTIADPSWEFQIFIHPT-GKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTE 368 (496)
T ss_dssp CCBGGGCTTTEEEEEECSSSSCCEEEEECTT-SSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGG
T ss_pred cccccccccccceeEecCCCCCceEEEEcCC-CCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccc
Confidence 112 21 12345689999999 66 55555677889986654321 11 122111 0
Q ss_pred ---cceE-EEEec-------CCCCcEEEEEecCCcEEEEEccCCCccEEEEecCC------------------------C
Q 021121 193 ---FEIL-ACDWN-------KYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHG------------------------Y 237 (317)
Q Consensus 193 ---~~v~-~i~~~-------~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~------------------------~ 237 (317)
.... .+... + ++.++++-.....|+.++. ++. +.++.+.. .
T Consensus 369 a~f~~P~~gv~vd~~~~~~~~-~g~lyVaD~~N~rIr~i~~-~G~--v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~ 444 (496)
T 3kya_A 369 ARMNNPCQGVFVKNPDYTGEE-EYDFYFVDRLNFCVRKVTP-EGI--VSTYAGRGASTSLADGNQWGTDDGDLREVARFR 444 (496)
T ss_dssp CBCSSEEEEEEEECTTCCSSC-CEEEEEEEGGGTEEEEECT-TCB--EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCS
T ss_pred cccCCCeEEEEEccccccccC-CCeEEEEECCCCEEEEEeC-CCC--EEEEecccccccccCccccccCCCCchhhhhcC
Confidence 1123 34443 3 5677777777788999983 332 44443220 1
Q ss_pred ceeEEEecCC-CCeeEEeeecCCeEEEEeccccc
Q 021121 238 AVRKVKFSPH-RRNLLASCSYDMTVCLWDFMVED 270 (317)
Q Consensus 238 ~v~~~~~~~~-~~~~l~~~~~d~~i~vwd~~~~~ 270 (317)
....|+++++ +. ++++=..+..|+.+++....
T Consensus 445 ~P~gIavd~~~g~-lyVaD~~N~rIrki~~~~~~ 477 (496)
T 3kya_A 445 DVSGLVYDDVKEM-FYVHDQVGHTIRTISMEQEE 477 (496)
T ss_dssp SEEEEEEETTTTE-EEEEETTTTEEEEEEECCCC
T ss_pred CCcEEEEECCCCE-EEEEeCCCCEEEEEECCCCc
Confidence 3567888886 54 55555566778888876543
No 293
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.70 E-value=7.1e-05 Score=62.90 Aligned_cols=238 Identities=11% Similarity=0.120 Sum_probs=136.2
Q ss_pred ceeEEEEecC-CCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcC---Ce
Q 021121 9 NGYSVKFSPF-YESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVAD---GS 84 (317)
Q Consensus 9 ~v~~~~~~p~-~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d---g~ 84 (317)
....++|+|+ .++.+.++-. .+.|+.++..... ...+ .........+++++++. ++++.... ..
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~-------~~~I~~id~~~g~--v~~~--~~~~~~P~giavd~dG~-lyVad~~~~~~~~ 207 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQ-------RDAFRHVDFVNQY--VDIK--TTNIGQCADVNFTLNGD-MVVVDDQSSDTNT 207 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECB-------TSCEEEEETTTTE--EEEE--CCCCSCEEEEEECTTCC-EEEEECCSCTTSE
T ss_pred CCceEEEccccCCCEEEEEeC-------CCCEEEEECCCCE--EEEe--ecCCCCccEEEECCCCC-EEEEcCCCCcccc
Confidence 4568899984 3467666643 2689999886543 2222 23445688999999985 55544321 11
Q ss_pred -EEEEEeCCCCCCCCceeeccCCcceEEEEEec-CCCCEEEEEcCCCEEEEEEcCCCceeEEe-ec-cccceEEEEEecC
Q 021121 85 -VKIYDTALPPTANPIRSLHEHTREVHSADYNP-TRRDSFITSSWDDTVKLWTVDRPTSVRTF-KE-HAYCVYNATWNPR 160 (317)
Q Consensus 85 -i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~dg~v~iwd~~~~~~~~~~-~~-~~~~v~~~~~~~~ 160 (317)
+...+.... ......+. .-.....+++.| ++. ++++-..++.|+.+|..++.....+ .. .......++|+|+
T Consensus 208 gv~~~~~~~~--~~~~~~~~-~~~~P~giavd~~~G~-lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpd 283 (433)
T 4hw6_A 208 GIYLFTRASG--FTERLSLC-NARGAKTCAVHPQNGK-IYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPT 283 (433)
T ss_dssp EEEEECGGGT--TCCEEEEE-ECSSBCCCEECTTTCC-EEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTT
T ss_pred eEEEEECCCC--eecccccc-ccCCCCEEEEeCCCCe-EEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCC
Confidence 222332211 11111111 223456688999 554 6666667889999999877652332 21 1223457999999
Q ss_pred CCC-eEEEEeCCCeEEEEeCCC--CCc--eeeeccC---------------ccceEEEEe---------cCCCCcEEEEE
Q 021121 161 HSD-VFCSASGDCTLRIWDVRE--MGS--TMIIPAH---------------EFEILACDW---------NKYDDCLIASA 211 (317)
Q Consensus 161 ~~~-~l~~~~~dg~i~i~d~~~--~~~--~~~~~~~---------------~~~v~~i~~---------~~~~~~~l~~~ 211 (317)
++ ++++-...+.|+.++... +.. ...+.+. -.....+++ .+ +++++++-
T Consensus 284 -G~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~-~g~lyvaD 361 (433)
T 4hw6_A 284 -GDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEED-EYDFYFCD 361 (433)
T ss_dssp -SSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSC-CEEEEEEE
T ss_pred -CCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCC-CCcEEEEE
Confidence 55 666666678899988652 211 1112111 112566888 55 77777777
Q ss_pred ecCCcEEEEEccCCCccEEEEecCC------------------CceeEEEecCCCCeeEEeeecCCeEEEEecc
Q 021121 212 SVDKSIKIWDVRNYRVPIAVLNGHG------------------YAVRKVKFSPHRRNLLASCSYDMTVCLWDFM 267 (317)
Q Consensus 212 ~~d~~i~v~d~~~~~~~~~~~~~~~------------------~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~ 267 (317)
...+.|+.++. ++. +..+.+.. .....|+++|....++++=..++.|+.++++
T Consensus 362 ~~n~~I~~~~~-~G~--v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 362 RDSHTVRVLTP-EGR--VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp TTTTEEEEECT-TSE--EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CCCCEEEEECC-CCC--EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 77788999985 332 33333211 1256788883333355555556677776653
No 294
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.61 E-value=4.5e-07 Score=80.96 Aligned_cols=222 Identities=9% Similarity=-0.006 Sum_probs=128.9
Q ss_pred CCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCC----CceeEEeeccccceEEEEE
Q 021121 82 DGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDR----PTSVRTFKEHAYCVYNATW 157 (317)
Q Consensus 82 dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~----~~~~~~~~~~~~~v~~~~~ 157 (317)
.+.|+..++... .. ..+......+..++|.+.+..++++-...+.|+.+++.. ......+......+..|++
T Consensus 385 ~~~I~~id~~~~---~~-~~~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glav 460 (699)
T 1n7d_A 385 RHEVRKMTLDRS---EY-TSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAV 460 (699)
T ss_dssp TTC-CEECTTSC---CE-ECCSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEEC
T ss_pred ccceEEEeCCCC---cc-eeeeccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEE
Confidence 356777776543 11 111222345667899987663444445668899999875 2222222222234567888
Q ss_pred ecCCCCeEEEEeCCCeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEecC-CcEEEEEccCCCccEEEEecCC
Q 021121 158 NPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVD-KSIKIWDVRNYRVPIAVLNGHG 236 (317)
Q Consensus 158 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d-~~i~v~d~~~~~~~~~~~~~~~ 236 (317)
.+.+++++++-...+.|.++++........+.........++++|..+.++++-... +.|.++++..... .......-
T Consensus 461 D~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~-~~l~~~~l 539 (699)
T 1n7d_A 461 DWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSLVTENI 539 (699)
T ss_dssp CCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCC-CEESCSSC
T ss_pred EeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCe-eEEEeCCC
Confidence 866566776666778999999875543333332234467889998445555544333 6788888764332 22222223
Q ss_pred CceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeee--cccceeEeEEEEeccCCeEEEeecCCcEEEEecC
Q 021121 237 YAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYD--HHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQG 311 (317)
Q Consensus 237 ~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~ 311 (317)
...+.|+|+|++..++++-...+.|..+++...... .... .......+|++.. +.++++....+.|..++..
T Consensus 540 ~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~-~~~~~~~~~~~P~glavd~--~~lywtd~~~~~V~~~d~~ 613 (699)
T 1n7d_A 540 QWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRK-TILEDEKRLAHPFSLAVFE--DKVFWTDIINEAIFSANRL 613 (699)
T ss_dssp SSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCE-EECCCSSSCSSCCCCEEET--TEEEEECSTTTCEEEEETT
T ss_pred CCccEEEEeccCCEEEEEecCCCeEEEEccCCCceE-EEEecCCcCCCceEeEEEC--CEEEEEeCCCCeEEEEEcc
Confidence 356789999987766666667788999998653311 1111 1112344566643 4566666667888888753
No 295
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.55 E-value=0.00015 Score=59.22 Aligned_cols=227 Identities=12% Similarity=0.162 Sum_probs=123.3
Q ss_pred cceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeee----cCCCCeeEEEecCC---CCCeEEEEE
Q 021121 8 FNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAF----DTADGVYDLAWSES---HDSLLIAAV 80 (317)
Q Consensus 8 ~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~---~~~~l~~~~ 80 (317)
.....++|.| +++++++.. .|+|++++ . .. ...+... ........|+|+|+ +..+.++-.
T Consensus 31 ~~P~~ia~~p--dG~l~V~e~-------~g~I~~i~-~-g~--~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~ 97 (352)
T 2ism_A 31 EVPWALAFLP--DGGMLIAER-------PGRIRLFR-E-GR--LSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRT 97 (352)
T ss_dssp SCEEEEEECT--TSCEEEEET-------TTEEEEEE-T-TE--EEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEE
T ss_pred CCceEEEEcC--CCeEEEEeC-------CCeEEEEE-C-CC--ccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEe
Confidence 3567899999 677777654 68999998 2 22 2222111 22457899999998 433444443
Q ss_pred cC-----CeEEEEEeCCCCC--CCC-ceeec---cCCcceEEEEEecCCCCEEEEEcC-------------CCEEEEEEc
Q 021121 81 AD-----GSVKIYDTALPPT--ANP-IRSLH---EHTREVHSADYNPTRRDSFITSSW-------------DDTVKLWTV 136 (317)
Q Consensus 81 ~d-----g~i~v~~~~~~~~--~~~-~~~~~---~~~~~v~~~~~~~~~~~~l~~~~~-------------dg~v~iwd~ 136 (317)
.. +.|..++...... .+. +..+. ........++|.|+|. ++++.+. .|.|..++.
T Consensus 98 ~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~-Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~ 176 (352)
T 2ism_A 98 VAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGM-LYVTTGEVYERELAQDLASLGGKILRLTP 176 (352)
T ss_dssp ECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSC-EEEECCCTTCGGGGGCTTCSSSEEEEECT
T ss_pred cCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCC-EEEEECCCCCCccccCCCCCceEEEEEcC
Confidence 32 5677787763210 011 11122 1112235799999996 5555432 257777776
Q ss_pred CCC------------ceeEEeeccccceEEEEEecCCCCeEEEEeCCCe--------EEEEeCCCCC-------------
Q 021121 137 DRP------------TSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCT--------LRIWDVREMG------------- 183 (317)
Q Consensus 137 ~~~------------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~--------i~i~d~~~~~------------- 183 (317)
+.. .....+...-.....++|+|+++.++++-..... |.+. ..+.
T Consensus 177 dG~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i--~~G~nyGwp~~~g~~~~ 254 (352)
T 2ism_A 177 EGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLI--VPGGNYGWPRVVGRGND 254 (352)
T ss_dssp TSSBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEE--CTTCBCCTTTCCSCCCC
T ss_pred CCCCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEe--ccCCcCCCCcccCCCCC
Confidence 531 1111121112336789999954676665433332 3333 2221
Q ss_pred -----ceeeeccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCcc-----EEEEecCCCceeEEEecCCCCeeEE
Q 021121 184 -----STMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVP-----IAVLNGHGYAVRKVKFSPHRRNLLA 253 (317)
Q Consensus 184 -----~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~-----~~~~~~~~~~v~~~~~~~~~~~~l~ 253 (317)
+...+. +......+++. ++.++++....+.|...++...... ...+......+..+++.|+|. +++
T Consensus 255 ~~~~~p~~~~~-~~~ap~G~~~~--~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~-lyv 330 (352)
T 2ism_A 255 PRYRDPLYFWP-QGFPPGNLAFF--RGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGA-LYV 330 (352)
T ss_dssp TTSCCCSEECT-TCCCEEEEEEE--TTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSC-EEE
T ss_pred CCCcCCeEecC-CCCCCcceEEE--CCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCc-EEE
Confidence 122222 22234567773 6777777767778888887654321 122222235688999999997 444
Q ss_pred e
Q 021121 254 S 254 (317)
Q Consensus 254 ~ 254 (317)
+
T Consensus 331 ~ 331 (352)
T 2ism_A 331 T 331 (352)
T ss_dssp E
T ss_pred E
Confidence 4
No 296
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.47 E-value=0.00027 Score=56.14 Aligned_cols=159 Identities=9% Similarity=0.187 Sum_probs=107.0
Q ss_pred CcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeecc-------ccceEEEEE---ecCCCCeEEEEe------
Q 021121 106 TREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEH-------AYCVYNATW---NPRHSDVFCSAS------ 169 (317)
Q Consensus 106 ~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~-------~~~v~~~~~---~~~~~~~l~~~~------ 169 (317)
..--.+++|.+....++++.-..++|..||...+......... ...+..+.| .|+ +.++++..
T Consensus 12 ~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~-grL~vv~~~~~af~ 90 (334)
T 2p9w_A 12 NLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNS-KRLFAVMKNAKSFN 90 (334)
T ss_dssp TCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSC-CEEEEEEEETTTTC
T ss_pred ccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCC-CcEEEEEccccccc
Confidence 3344568898866635555557999999999765443332111 124689999 577 77776543
Q ss_pred -------CCCeEEEEeCC---CCCceeeecc-------------CccceEEEEecCCCCcEEEEEecC-CcEEEEEccCC
Q 021121 170 -------GDCTLRIWDVR---EMGSTMIIPA-------------HEFEILACDWNKYDDCLIASASVD-KSIKIWDVRNY 225 (317)
Q Consensus 170 -------~dg~i~i~d~~---~~~~~~~~~~-------------~~~~v~~i~~~~~~~~~l~~~~~d-~~i~v~d~~~~ 225 (317)
.+..|..||+. +++.+....- .......++..+ +++..++++.. +.|..++....
T Consensus 91 ~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~-~GnaYVt~s~~~~~I~rV~pdG~ 169 (334)
T 2p9w_A 91 FADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDR-DGNSYVAFALGMPAIARVSADGK 169 (334)
T ss_dssp TTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECT-TSCEEEEEEESSCEEEEECTTSC
T ss_pred ccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECC-CCCEEEeCCCCCCeEEEEeCCCC
Confidence 26789999999 7766654431 112478999999 99999999988 88888876643
Q ss_pred CccEEEE--ec----CCCceeEEEecCCCCeeEEeeecCCeEEEEecccc
Q 021121 226 RVPIAVL--NG----HGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVE 269 (317)
Q Consensus 226 ~~~~~~~--~~----~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~ 269 (317)
. +..+ .. .....+.|+++|++..+++..+ .|.+..+|+...
T Consensus 170 ~--~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~p 216 (334)
T 2p9w_A 170 T--VSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSKP 216 (334)
T ss_dssp C--EEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECSSS
T ss_pred E--EeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCCC
Confidence 2 2221 11 1223679999999985555545 999999998853
No 297
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.41 E-value=0.00031 Score=56.32 Aligned_cols=194 Identities=11% Similarity=0.168 Sum_probs=119.8
Q ss_pred CeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecC----CCC--E-EEEEcC--CCEEEEEEcC--CCcee
Q 021121 74 SLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPT----RRD--S-FITSSW--DDTVKLWTVD--RPTSV 142 (317)
Q Consensus 74 ~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~--~-l~~~~~--dg~v~iwd~~--~~~~~ 142 (317)
.+++.....+-+.+||+ .+ +.+..+.. +.++.+..-|. ++. + +++... +++|.+|++. ++ .+
T Consensus 41 s~ii~t~k~~gL~Vydl-~G---~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~-~l 113 (355)
T 3amr_A 41 SKLITTNKKSGLVVYSL-DG---KMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNG-TL 113 (355)
T ss_dssp CEEEEEETTTEEEEEET-TS---CEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTC-CE
T ss_pred cEEEEEcCCCCEEEEcC-CC---cEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCC-ce
Confidence 45666667788999998 34 55555543 56777776653 110 2 333444 5899999773 33 34
Q ss_pred EEeec------cc-cceEEEEE--ecCCCC-eEEEEeCCCeEEEEeCCC-------CCceeeeccCccceEEEEecCCCC
Q 021121 143 RTFKE------HA-YCVYNATW--NPRHSD-VFCSASGDCTLRIWDVRE-------MGSTMIIPAHEFEILACDWNKYDD 205 (317)
Q Consensus 143 ~~~~~------~~-~~v~~~~~--~~~~~~-~l~~~~~dg~i~i~d~~~-------~~~~~~~~~~~~~v~~i~~~~~~~ 205 (317)
..+.. .. ..+..+++ +|..+. ++++...+|.+..|++.. .+.++.+.. ...+..+...+ ..
T Consensus 114 ~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd-~~ 191 (355)
T 3amr_A 114 QSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADD-EY 191 (355)
T ss_dssp EECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEET-TT
T ss_pred eeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcC-CC
Confidence 44421 11 45677777 675344 677888899999999832 244556653 45678888888 77
Q ss_pred cEEEEEecCCcEEEEEccCCC----ccEEEEe-cC-CCceeEEEe--cCCCC-eeEEeeecCCeEEEEecccccceeeee
Q 021121 206 CLIASASVDKSIKIWDVRNYR----VPIAVLN-GH-GYAVRKVKF--SPHRR-NLLASCSYDMTVCLWDFMVEDALVGRY 276 (317)
Q Consensus 206 ~~l~~~~~d~~i~v~d~~~~~----~~~~~~~-~~-~~~v~~~~~--~~~~~-~~l~~~~~d~~i~vwd~~~~~~~~~~~ 276 (317)
..|+.+-++..|..|+.+... ..+.... ++ ...+..|++ .++++ ++++++-.++++.+||.......+..+
T Consensus 192 g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f 271 (355)
T 3amr_A 192 GRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADF 271 (355)
T ss_dssp TEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEE
T ss_pred CeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEE
Confidence 788888888777777754211 1232321 11 236778887 45555 445555467899999986333344444
No 298
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=98.37 E-value=0.0018 Score=61.06 Aligned_cols=288 Identities=11% Similarity=0.078 Sum_probs=146.9
Q ss_pred cCcceeEEEEecCCC-----CeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecC-CCCCeEEEE
Q 021121 6 TPFNGYSVKFSPFYE-----SRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSE-SHDSLLIAA 79 (317)
Q Consensus 6 ~~~~v~~~~~~p~~~-----~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~ 79 (317)
.+..|.|+++.|..+ ..++++... |+.|+|++++.-+ ..............++.+.. .+..+|..|
T Consensus 552 l~~evscl~i~~~~~~~~~s~~~aVg~~~------d~tv~I~sL~~l~--~~~~~~L~~~~~p~si~l~~~~~~~~L~ig 623 (1158)
T 3ei3_A 552 MEHEVACLDITPLGDSNGLSPLCAIGLWT------DISARILKLPSFE--LLHKEMLGGEIIPRSILMTTFESSHYLLCA 623 (1158)
T ss_dssp CSSCEEEEECCCCSSSTTCCSEEEEEETT------TTEEEEEETTTCC--EEEEEECCSSCCEEEEEEEEETTEEEEEEE
T ss_pred CCCceEEEEeecCCCCcccccEEEEEECC------CCEEEEEECCCCC--eEEEEECCCCCCCcEEEEEEeCCCcEEEEE
Confidence 456799999987432 344444433 8899999997533 11122222222334443331 233588999
Q ss_pred EcCCeEEEEEeCCCCCCCCc--e-eeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeeccccce-EEE
Q 021121 80 VADGSVKIYDTALPPTANPI--R-SLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCV-YNA 155 (317)
Q Consensus 80 ~~dg~i~v~~~~~~~~~~~~--~-~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v-~~~ 155 (317)
-.||.+.-+.++.. ..... + .+-+ ..++.-..+...+...+++.+. ....++.-+ ++.... .-.-..+ ...
T Consensus 624 l~dG~l~~~~~d~~-tg~l~d~r~~~LG-~~pv~L~~~~~~~~~~V~a~s~-rp~liy~~~-~~l~~s-~l~~~~v~~~~ 698 (1158)
T 3ei3_A 624 LGDGALFYFGLNIE-TGLLSDRKKVTLG-TQPTVLRTFRSLSTTNVFACSD-RPTVIYSSN-HKLVFS-NVNLKEVNYMC 698 (1158)
T ss_dssp ETTSEEEEEEECTT-TCCEEEEEEEECC-SSCCEEEEEESSSCEEEEEESS-SCEEEEESS-SSEEEE-EBSSSCCCEEE
T ss_pred eCCCeEEEEEEcCC-CCccccceeEEcC-CCceEEEEEeeCCceeEEEECC-CCEEEEEcC-CceEEe-ccChHHhceEe
Confidence 99999888777532 11111 1 1122 3455555555444434444443 333344332 222111 1111123 233
Q ss_pred EEecCC-CCeEEEEeCCCeEEEEeCCCCCc--eeeeccCccceEEEEecCCCCcEEEEEecC------------------
Q 021121 156 TWNPRH-SDVFCSASGDCTLRIWDVREMGS--TMIIPAHEFEILACDWNKYDDCLIASASVD------------------ 214 (317)
Q Consensus 156 ~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d------------------ 214 (317)
.|+... ++-++..+ ++.++|..+.+... .++++ ....+..++++| ..+.++.+..+
T Consensus 699 ~F~se~~~~g~v~~~-~~~LrI~~i~~~~~~~~~~ip-L~~Tprri~y~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 775 (1158)
T 3ei3_A 699 PLNSDGYPDSLALAN-NSTLTIGTIDEIQKLHIRTVP-LYESPRKICYQE-VSQCFGVLSSRIEVQDTSGGTTALRPSAS 775 (1158)
T ss_dssp EECCSSSTTEEEEEC-SSCEEEEEECCSSSEEEEEEE-CSSEEEEEEEEG-GGTEEEEEEEEEEEECSSSSEEESSCCHH
T ss_pred ccCcccCCCcEEEEc-CCceEEEEecccCCeeEEEEe-CCCCceEEEEcC-CCCEEEEEEEeccccccccccchhhhhhh
Confidence 354321 23444333 45688888754432 22232 344677888888 44444333211
Q ss_pred -------------------------------CcEEEEEccCCCccEEEEe-cCCCceeEEE---ecCCCCeeEEeee---
Q 021121 215 -------------------------------KSIKIWDVRNYRVPIAVLN-GHGYAVRKVK---FSPHRRNLLASCS--- 256 (317)
Q Consensus 215 -------------------------------~~i~v~d~~~~~~~~~~~~-~~~~~v~~~~---~~~~~~~~l~~~~--- 256 (317)
+.|++.|..+.+. +..+. .....+.+++ |..+.+.+++.|.
T Consensus 776 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~-i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~ 854 (1158)
T 3ei3_A 776 TQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEV-LHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMV 854 (1158)
T ss_dssp HHCSEEEECCCCCC----------CCCEEEEEEEEEEETTTCCE-EEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEEC
T ss_pred hhhhhhcccccccccccccCchhhcCCceeeEEEEEEeCCCCeE-EEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeec
Confidence 2356666655542 22222 2233444444 4433334777776
Q ss_pred -------cCCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEeecCCcEEEEecCCCC
Q 021121 257 -------YDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGMDP 314 (317)
Q Consensus 257 -------~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~ 314 (317)
..|.|.+|++...+..........+++++++--. +.++++. ..+|++|++..++
T Consensus 855 ~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~~--g~Lla~i--g~~l~vy~l~~~~ 915 (1158)
T 3ei3_A 855 YPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFN--GKLLASI--NSTVRLYEWTTEK 915 (1158)
T ss_dssp CTTCSSCCCEEEEEEEEETTEEEEEEEEEESSCEEEEEEET--TEEEEEE--TTEEEEEEECTTS
T ss_pred CCCCCCCCceEEEEEEEECCEEEEEEEEEcCCcCEEEeeeC--CEEEEEc--CCEEEEEECCCCc
Confidence 3478999998754322222223467788876442 5444433 4789999998654
No 299
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.35 E-value=0.00022 Score=56.71 Aligned_cols=199 Identities=6% Similarity=0.104 Sum_probs=121.4
Q ss_pred eeEEEecCCCCCeEEEEE-cCCeEEEEEeCCCCCCCCceeecc----C--CcceEEEEE---ecCCCCEEEEEc------
Q 021121 63 VYDLAWSESHDSLLIAAV-ADGSVKIYDTALPPTANPIRSLHE----H--TREVHSADY---NPTRRDSFITSS------ 126 (317)
Q Consensus 63 v~~~~~~~~~~~~l~~~~-~dg~i~v~~~~~~~~~~~~~~~~~----~--~~~v~~~~~---~~~~~~~l~~~~------ 126 (317)
-.+++|.+... .|..++ ..++|..|+...+. ...+ .+.. . ...+..+.| .|++. ++++..
T Consensus 15 PE~~~wd~~~g-~~~vs~l~~g~V~~~~~~~~~-~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~gr-L~vv~~~~~af~ 90 (334)
T 2p9w_A 15 PEDTIYDRTRQ-VFYQSNLYKGRIEVYNPKTQS-HFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKR-LFAVMKNAKSFN 90 (334)
T ss_dssp CSCEEEETTTT-EEEEEETTTTEEEEECTTTCC-EEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCE-EEEEEEETTTTC
T ss_pred CcCccCcCCCC-EEEEEeccCCEEEEEcCCCCe-EEEE-ecCCccccCCCcceeeEEEEeccCCCCc-EEEEEccccccc
Confidence 45688988654 555555 78999999976331 1111 2221 1 124578999 58765 555433
Q ss_pred -------CCCEEEEEEcC---CCceeEEeec--c-----------ccceEEEEEecCCCCeEEEEeCC-CeEEEEeCCCC
Q 021121 127 -------WDDTVKLWTVD---RPTSVRTFKE--H-----------AYCVYNATWNPRHSDVFCSASGD-CTLRIWDVREM 182 (317)
Q Consensus 127 -------~dg~v~iwd~~---~~~~~~~~~~--~-----------~~~v~~~~~~~~~~~~l~~~~~d-g~i~i~d~~~~ 182 (317)
.+..|..+|+. +++.+....- . ......++..++ ++..++++.. +.|...+....
T Consensus 91 ~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~-GnaYVt~s~~~~~I~rV~pdG~ 169 (334)
T 2p9w_A 91 FADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRD-GNSYVAFALGMPAIARVSADGK 169 (334)
T ss_dssp TTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTT-SCEEEEEEESSCEEEEECTTSC
T ss_pred ccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCC-CCEEEeCCCCCCeEEEEeCCCC
Confidence 26789999999 7777665541 1 124889999998 8888888888 88888887643
Q ss_pred Cceeeec------cCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEe--cC---CCceeEE-EecCCCCe
Q 021121 183 GSTMIIP------AHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLN--GH---GYAVRKV-KFSPHRRN 250 (317)
Q Consensus 183 ~~~~~~~------~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~--~~---~~~v~~~-~~~~~~~~ 250 (317)
....+. ......+.|+++| +++.|++....+.+..+|++.......... +. -.....| .--.+|+-
T Consensus 170 -~~~~~~~~~~~~~~~~G~nGIv~~p-dg~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~v 247 (334)
T 2p9w_A 170 -TVSTFAWESGNGGQRPGYSGITFDP-HSNKLIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNES 247 (334)
T ss_dssp -CEEEEEECCCCSSSCCSCSEEEEET-TTTEEEEESSSSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEE
T ss_pred -EEeeeeecCCCcccccCcceEEEeC-CCCEEEEEcCCCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEE
Confidence 222221 1122367899999 888777776699999999885332001111 21 1123333 33336663
Q ss_pred eEEeeecCCeEEEEeccc
Q 021121 251 LLASCSYDMTVCLWDFMV 268 (317)
Q Consensus 251 ~l~~~~~d~~i~vwd~~~ 268 (317)
+|++....+.+.+.+...
T Consensus 248 llV~~~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 248 VLVGARAPYAISFRSWDN 265 (334)
T ss_dssp EEEEEETTEEEEEECSST
T ss_pred EEEEcCCCCEEEEECCCC
Confidence 466665666666655433
No 300
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.35 E-value=0.00067 Score=55.32 Aligned_cols=229 Identities=10% Similarity=0.076 Sum_probs=123.1
Q ss_pred CCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceee---ccCCcceEEEEEecC---CCCEEEEEcCC-----
Q 021121 60 ADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSL---HEHTREVHSADYNPT---RRDSFITSSWD----- 128 (317)
Q Consensus 60 ~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~---~~~~l~~~~~d----- 128 (317)
-.....++|.|++. ++++..+|.|.+++ . + ....+..+ .........++++|+ +..++++-...
T Consensus 30 l~~P~~ia~~pdG~--l~V~e~~g~I~~i~-~-g-~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~ 104 (352)
T 2ism_A 30 LEVPWALAFLPDGG--MLIAERPGRIRLFR-E-G-RLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLR 104 (352)
T ss_dssp CSCEEEEEECTTSC--EEEEETTTEEEEEE-T-T-EEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSE
T ss_pred CCCceEEEEcCCCe--EEEEeCCCeEEEEE-C-C-CccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCc
Confidence 34567999999983 45556779999988 2 2 11211111 122456789999998 44244443322
Q ss_pred CEEEEEEcCCCce-----e-EEee---ccccceEEEEEecCCCCeEEEEeC-------------CCeEEEEeCCCC----
Q 021121 129 DTVKLWTVDRPTS-----V-RTFK---EHAYCVYNATWNPRHSDVFCSASG-------------DCTLRIWDVREM---- 182 (317)
Q Consensus 129 g~v~iwd~~~~~~-----~-~~~~---~~~~~v~~~~~~~~~~~~l~~~~~-------------dg~i~i~d~~~~---- 182 (317)
+.|..++...+.. + ..+. ........++|.|+ +.+.++.+. .|.|.-++....
T Consensus 105 ~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pd-G~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~ 183 (352)
T 2ism_A 105 NQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPD-GMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPG 183 (352)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTT-SCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTT
T ss_pred cEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCC-CCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCC
Confidence 6788888775421 1 1122 11123468999998 666666432 256777776531
Q ss_pred ---------CceeeeccCccceEEEEecCCCCcEEEEEecCCc--------EEEEEccC---------------CCccEE
Q 021121 183 ---------GSTMIIPAHEFEILACDWNKYDDCLIASASVDKS--------IKIWDVRN---------------YRVPIA 230 (317)
Q Consensus 183 ---------~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~--------i~v~d~~~---------------~~~~~~ 230 (317)
.....-.++. ....++|+|.++.++++-..... |.+..... ...+..
T Consensus 184 npf~~~~~~~~~i~a~G~r-np~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~ 262 (352)
T 2ism_A 184 NPFLGRRGARPEVYSLGHR-NPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLY 262 (352)
T ss_dssp CTTTTCTTSCTTEEEECCS-EECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSE
T ss_pred CcccCCCCCCccEEEEcCC-CcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeE
Confidence 1111111232 25678899855665555433333 33332111 012233
Q ss_pred EEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccce-----eeeeecccceeEeEEEEeccCCeEEEe
Q 021121 231 VLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDAL-----VGRYDHHTEFAVGVDMSVLVEGLLAST 299 (317)
Q Consensus 231 ~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~-----~~~~~~~~~~v~~~~~~~~~~~~l~s~ 299 (317)
.+..| .....++| .++. ++++.-..+.|...++...... ...+......+..+++.|+ +.++++.
T Consensus 263 ~~~~~-~ap~G~~~-~~G~-l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pd-G~lyv~~ 332 (352)
T 2ism_A 263 FWPQG-FPPGNLAF-FRGD-LYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPD-GALYVTT 332 (352)
T ss_dssp ECTTC-CCEEEEEE-ETTE-EEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTT-SCEEEEE
T ss_pred ecCCC-CCCcceEE-ECCE-EEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCC-CcEEEEE
Confidence 33222 34567787 3554 5666556677888777654321 1122122356889999998 5655554
No 301
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.35 E-value=0.00049 Score=55.24 Aligned_cols=187 Identities=8% Similarity=0.111 Sum_probs=116.0
Q ss_pred EEEEEcCCCEEEEEEcCCCceeEEeeccccceEEEEEecC---CCC---eEEEEeC---CCeEEEEeCC-CCCceeeecc
Q 021121 121 SFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPR---HSD---VFCSASG---DCTLRIWDVR-EMGSTMIIPA 190 (317)
Q Consensus 121 ~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~---~~~---~l~~~~~---dg~i~i~d~~-~~~~~~~~~~ 190 (317)
+++.....+-+.+||+ +++.+..+.. +.++.+..-|. ++. ++++... +++|.+|++. ....+..+..
T Consensus 42 ~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~~ 118 (355)
T 3amr_A 42 KLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMTD 118 (355)
T ss_dssp EEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECSC
T ss_pred EEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeeccc
Confidence 6777777889999999 7888888753 55777776663 011 3333333 5789999763 2223444421
Q ss_pred ------Cc-cceEEEEe--cCCCCc-EEEEEecCCcEEEEEccCC------CccEEEEecCCCceeEEEecCCCCeeEEe
Q 021121 191 ------HE-FEILACDW--NKYDDC-LIASASVDKSIKIWDVRNY------RVPIAVLNGHGYAVRKVKFSPHRRNLLAS 254 (317)
Q Consensus 191 ------~~-~~v~~i~~--~~~~~~-~l~~~~~d~~i~v~d~~~~------~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 254 (317)
.. ..+..+++ +|..+. ++++...+|.+..|++... ...+..+.. .+.+-.+...+... .|+.
T Consensus 119 ~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g-~Lyv 196 (355)
T 3amr_A 119 PDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYG-RLYI 196 (355)
T ss_dssp TTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTT-EEEE
T ss_pred cccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCC-eEEE
Confidence 11 44566776 774453 6777888899999998432 122444443 45778889998777 5888
Q ss_pred eecCCeEEEEecccc----cceeeeee-c-ccceeEeEEEEe--ccCCeEEEee-cCCcEEEEecCC
Q 021121 255 CSYDMTVCLWDFMVE----DALVGRYD-H-HTEFAVGVDMSV--LVEGLLASTG-WDELVYVWQQGM 312 (317)
Q Consensus 255 ~~~d~~i~vwd~~~~----~~~~~~~~-~-~~~~v~~~~~~~--~~~~~l~s~~-~dg~i~~w~~~~ 312 (317)
+-++..|..++.+.. ..++.... + -...+..|++-+ ++..+|++++ .++...+||...
T Consensus 197 ~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~ 263 (355)
T 3amr_A 197 AEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQG 263 (355)
T ss_dssp EETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESST
T ss_pred ecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCC
Confidence 888876666664421 12333332 2 223688888854 3223455444 678999999863
No 302
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.32 E-value=0.0014 Score=57.63 Aligned_cols=227 Identities=3% Similarity=-0.076 Sum_probs=134.3
Q ss_pred CceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEe
Q 021121 36 NGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYN 115 (317)
Q Consensus 36 ~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 115 (317)
.+.|+..++........ ......-..+.+++|.+.++.++++-...+.|..++++.. .........-.....+++.
T Consensus 325 ~~~i~~i~l~~~~~~~~-~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~---~~~~v~~~~~~~p~GlAvD 400 (619)
T 3s94_A 325 RTDLRRISLDTPDFTDI-VLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGS---GSQFVVTAQIAHPDGIAVD 400 (619)
T ss_dssp SSCEEEEESSSTTCCCE-ECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSC---SCEEEECSSCSCCCEEEEE
T ss_pred ccceEEEecCCCcccee-EEeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCC---ccEEEEECCCCCcCceEEe
Confidence 45777777765542111 1111223457889999866455555556788888887643 2222223333466788898
Q ss_pred cCCCCEEEEEcCCCEEEEEEcCCCceeEEeeccccceEEEEEecCCCCeEEEEe-CCCeEEEEeCCCCCceeeeccCccc
Q 021121 116 PTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSAS-GDCTLRIWDVREMGSTMIIPAHEFE 194 (317)
Q Consensus 116 ~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~ 194 (317)
..+.+++.+-+..+.|.+.++............-.....+++.|..+.++++-. ..+.|...++............-..
T Consensus 401 ~~~~~lY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~l~~ 480 (619)
T 3s94_A 401 WVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNTSLGW 480 (619)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSC
T ss_pred cccCcEEEEeCCCCcEEEEeCCCCeEEEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEeCCCCC
Confidence 766646667677899999998755332222333456899999997565655542 2467877777644333233333345
Q ss_pred eEEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccc
Q 021121 195 ILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVE 269 (317)
Q Consensus 195 v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~ 269 (317)
.+.+++++..++++++-+..+.|..+++..... .......-.....++...+ +++++-...+.|...|..++
T Consensus 481 P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~~~-~~~~~~~l~~P~glav~~~--~ly~tD~~~~~I~~~~k~~g 552 (619)
T 3s94_A 481 PNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGR-RVLVEDKIPHIFGFTLLGD--YVYWTDWQRRSIERVHKRSA 552 (619)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEESSSCCC-EEEEECCCCSSCCEEEETT--EEEEECTTSSCEEEEESSSC
T ss_pred CeeeEEcccCCEEEEEECCCCEEEEEecCCCce-EEEeccCCCCcEEEEEECC--EEEEeecCCCeEEEEEcCCC
Confidence 788999984555556655667899999865443 2222222222345666533 35555445566666666554
No 303
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.12 E-value=0.0023 Score=52.20 Aligned_cols=233 Identities=10% Similarity=0.050 Sum_probs=125.0
Q ss_pred cceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeee----cCCCCeeEEEecCC---CCCeEEEEE
Q 021121 8 FNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAF----DTADGVYDLAWSES---HDSLLIAAV 80 (317)
Q Consensus 8 ~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~---~~~~l~~~~ 80 (317)
.....++|.| +++++++.. +|+|++++.+ . . ..+... ........|+++|+ +..+.++-.
T Consensus 29 ~~P~~ia~~p--dG~l~V~e~-------~g~I~~~d~~--G-~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~ 95 (354)
T 3a9g_A 29 EVPWSIAPLG--GGRYLVTER-------PGRLVLISPS--G-K-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYAS 95 (354)
T ss_dssp SCEEEEEEEE--TTEEEEEET-------TTEEEEECSS--C-E-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEE
T ss_pred CCCeEEEEcC--CCeEEEEeC-------CCEEEEEeCC--C-c-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEe
Confidence 4567899999 678777754 6899988632 2 1 222211 22356899999997 433444433
Q ss_pred c---C----CeEEEEEeCCCC-C---CCCc-eeecc-CCcceEEEEEecCCCCEEEEEcC-------------CCEEEEE
Q 021121 81 A---D----GSVKIYDTALPP-T---ANPI-RSLHE-HTREVHSADYNPTRRDSFITSSW-------------DDTVKLW 134 (317)
Q Consensus 81 ~---d----g~i~v~~~~~~~-~---~~~~-~~~~~-~~~~v~~~~~~~~~~~~l~~~~~-------------dg~v~iw 134 (317)
. + ..|..|+..... . .+.+ ..+.. .......+.|.|+|. ++++.+. .|.|..+
T Consensus 96 ~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~-Lyvt~G~~~~~~~~~d~~~~~G~I~ri 174 (354)
T 3a9g_A 96 YFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGM-LYITTGDAADPRLAQDLSSLAGKILRV 174 (354)
T ss_dssp EECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSC-EEEECCCTTCGGGGTCTTCCSSEEEEE
T ss_pred ccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCc-EEEEECCCCCCccccCCCCCCeEEEEE
Confidence 2 2 567777765321 0 0111 11211 111245689999997 5555432 2567766
Q ss_pred EcCCCc-------eeEEeeccccceEEEEEecCCCCeEEEEeCCC---eEEEEeCCC--------C--------Cceeee
Q 021121 135 TVDRPT-------SVRTFKEHAYCVYNATWNPRHSDVFCSASGDC---TLRIWDVRE--------M--------GSTMII 188 (317)
Q Consensus 135 d~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg---~i~i~d~~~--------~--------~~~~~~ 188 (317)
+.+..- ....+...-.....++|+|+.+.++++-.... .|.+...-. + .+...+
T Consensus 175 ~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~ 254 (354)
T 3a9g_A 175 DEEGRPPADNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDT 254 (354)
T ss_dssp CTTSCCCTTSSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEEC
T ss_pred cCCCCCCCCCCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeec
Confidence 664320 01112111233678999995466665533222 233332110 0 122222
Q ss_pred ccCccceEEEEecC------CCCcEEEEEecCCcEEEEEccCCCccE--EEEe-cCCCceeEEEecCCCCeeEEee
Q 021121 189 PAHEFEILACDWNK------YDDCLIASASVDKSIKIWDVRNYRVPI--AVLN-GHGYAVRKVKFSPHRRNLLASC 255 (317)
Q Consensus 189 ~~~~~~v~~i~~~~------~~~~~l~~~~~d~~i~v~d~~~~~~~~--~~~~-~~~~~v~~~~~~~~~~~~l~~~ 255 (317)
.........+++.. .++.++++....+.|...++....... ..+. .....+..+++.|+|. ++++.
T Consensus 255 ~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~-lyv~~ 329 (354)
T 3a9g_A 255 GSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGG-ILIST 329 (354)
T ss_dssp TTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSC-EEEEE
T ss_pred CCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCc-EEEEE
Confidence 11223466777731 267777777777789888887532211 2222 2245688999999997 45444
No 304
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.10 E-value=0.0024 Score=51.78 Aligned_cols=205 Identities=10% Similarity=0.125 Sum_probs=116.8
Q ss_pred eeEEEEecCCCCeEEEEEecccc------cccCceEEEEecCCCCCcceeeeeec-----CCCCeeEEEecC--CCCCeE
Q 021121 10 GYSVKFSPFYESRLAVATAQNFG------ILGNGRVHVLDLSPAAPALTELVAFD-----TADGVYDLAWSE--SHDSLL 76 (317)
Q Consensus 10 v~~~~~~p~~~~~~~~~~~~~~~------~~~~g~i~i~~~~~~~~~~~~~~~~~-----~~~~v~~~~~~~--~~~~~l 76 (317)
.-.+...| ++.+.++++.-+. ...+|.|.++|.++.....+.+...+ ..-....+.+.+ ++..+|
T Consensus 52 ~EDi~~~~--~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L 129 (355)
T 3sre_A 52 SEDLEILP--NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYL 129 (355)
T ss_dssp CCEEEECT--TSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEE
T ss_pred cceeEEcC--CCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEE
Confidence 45667777 6777777631110 01389999999985443344443322 123567777765 343344
Q ss_pred EEE-Ec--CCeEEEEEeCCCCC-CCCceeeccC-CcceEEEEEecCCCCEEEEEc-----------------CCCEEEEE
Q 021121 77 IAA-VA--DGSVKIYDTALPPT-ANPIRSLHEH-TREVHSADYNPTRRDSFITSS-----------------WDDTVKLW 134 (317)
Q Consensus 77 ~~~-~~--dg~i~v~~~~~~~~-~~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~~-----------------~dg~v~iw 134 (317)
+++ .. +..|.+|+++.... ...+..+.+. -...+.+.+.++|. ++++.. ..|.|..+
T Consensus 130 ~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~-fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~ 208 (355)
T 3sre_A 130 LVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEH-FYATNDHYFIDPYLKSWEMHLGLAWSFVTYY 208 (355)
T ss_dssp EEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTE-EEEEESCSCSSHHHHHHHHHTTCCCEEEEEE
T ss_pred EEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCC-EEecCCcEeCCcccccchhhccCCccEEEEE
Confidence 444 33 46889999876422 1222233322 24578999999987 555543 13566666
Q ss_pred EcCCCceeEEeeccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCce---eeeccCccceEEEEecCCCCcEEEEE
Q 021121 135 TVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGST---MIIPAHEFEILACDWNKYDDCLIASA 211 (317)
Q Consensus 135 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~---~~~~~~~~~v~~i~~~~~~~~~l~~~ 211 (317)
|. ++ ...+...-...+.++|+|++..+.++-+..+.|..|++.....+ ..+ ......-.+++.+.++++.+++
T Consensus 209 d~--~~-~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~ 284 (355)
T 3sre_A 209 SP--ND-VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGC 284 (355)
T ss_dssp CT--TC-CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEE
T ss_pred EC--Ce-EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEe
Confidence 65 33 33333334557999999994445555567889999998643222 223 2234556777776227776655
Q ss_pred ecC-CcEEEEE
Q 021121 212 SVD-KSIKIWD 221 (317)
Q Consensus 212 ~~d-~~i~v~d 221 (317)
..+ +.|..||
T Consensus 285 ~~~g~~v~~~~ 295 (355)
T 3sre_A 285 HPNGMRIFFYD 295 (355)
T ss_dssp ESCHHHHHSCC
T ss_pred cCCceEEEEEC
Confidence 533 3444444
No 305
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.03 E-value=0.0034 Score=50.92 Aligned_cols=186 Identities=8% Similarity=0.067 Sum_probs=106.6
Q ss_pred eEEEEEecCCCCEEEEE------------cCCCEEEEEEcCCCc-eeEEe--ec-----cccceEEEEEecC-CC--CeE
Q 021121 109 VHSADYNPTRRDSFITS------------SWDDTVKLWTVDRPT-SVRTF--KE-----HAYCVYNATWNPR-HS--DVF 165 (317)
Q Consensus 109 v~~~~~~~~~~~~l~~~------------~~dg~v~iwd~~~~~-~~~~~--~~-----~~~~v~~~~~~~~-~~--~~l 165 (317)
...+...|+|. .++++ ..+|.|.++|+++.. ....+ .+ .......+.+.++ ++ .++
T Consensus 52 ~EDi~~~~~G~-~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 52 SEDLEILPNGL-AFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCEEEECTTSE-EEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred cceeEEcCCCe-EEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 44556677654 33333 268999999997431 12222 22 2346788888663 13 244
Q ss_pred EEEeC--CCeEEEEeCCCCCcee----eeccC-ccceEEEEecCCCCcEEEEEe-----------------cCCcEEEEE
Q 021121 166 CSASG--DCTLRIWDVREMGSTM----IIPAH-EFEILACDWNKYDDCLIASAS-----------------VDKSIKIWD 221 (317)
Q Consensus 166 ~~~~~--dg~i~i~d~~~~~~~~----~~~~~-~~~v~~i~~~~~~~~~l~~~~-----------------~d~~i~v~d 221 (317)
++-.. +..+.+|++....... .+.+. -...+.+.+.+ ++.++++.. ..|.|..+|
T Consensus 131 Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~-~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d 209 (355)
T 3sre_A 131 VVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVG-PEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYS 209 (355)
T ss_dssp EEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEE-TTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEEC
T ss_pred EEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeC-CCCEEecCCcEeCCcccccchhhccCCccEEEEEE
Confidence 44333 4678888776543222 22221 23468888988 888777654 124566666
Q ss_pred ccCCCccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccce--eeeeecccceeEeEEEEe-ccCCeEEE
Q 021121 222 VRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDAL--VGRYDHHTEFAVGVDMSV-LVEGLLAS 298 (317)
Q Consensus 222 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~--~~~~~~~~~~v~~~~~~~-~~~~~l~s 298 (317)
.. + ...+...-...+.++|+|+++.++++-+..+.|..|++.....+ ...+ ...+..-.+++.+ + +++.++
T Consensus 210 ~~--~--~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~-G~lwva 283 (355)
T 3sre_A 210 PN--D--VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVT-GDLWVG 283 (355)
T ss_dssp TT--C--CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTT-CCEEEE
T ss_pred CC--e--EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCC-CcEEEE
Confidence 53 2 22222222356899999999976666667889999998643212 1122 2245567788887 4 566665
Q ss_pred eecC
Q 021121 299 TGWD 302 (317)
Q Consensus 299 ~~~d 302 (317)
+..+
T Consensus 284 ~~~~ 287 (355)
T 3sre_A 284 CHPN 287 (355)
T ss_dssp EESC
T ss_pred ecCC
Confidence 5433
No 306
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=98.00 E-value=0.0021 Score=51.12 Aligned_cols=223 Identities=9% Similarity=0.066 Sum_probs=109.7
Q ss_pred CeEEEEEcC--CeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCC----CEEEEEEcCCCceeEE--e
Q 021121 74 SLLIAAVAD--GSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWD----DTVKLWTVDRPTSVRT--F 145 (317)
Q Consensus 74 ~~l~~~~~d--g~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d----g~v~iwd~~~~~~~~~--~ 145 (317)
.+++.|+.+ ..+.+||.... ....+..+.........+.+ ++. +++.|+.+ ..+.+||+.+.+-... +
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~-~W~~~~~~p~~r~~~~~~~~--~~~-lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~ 88 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDY-SWTDIRCPFEKRRDAACVFW--DNV-VYILGGSQLFPIKRMDCYNVVKDSWYSKLGP 88 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTT-EEEECCCCSCCCBSCEEEEE--TTE-EEEECCBSSSBCCEEEEEETTTTEEEEEECC
T ss_pred eEEEEeCCCCCceEEEecCCCC-CEecCCCCCcccceeEEEEE--CCE-EEEEeCCCCCCcceEEEEeCCCCeEEECCCC
Confidence 466666543 56888887654 22222222211122222222 344 67777654 6788999887643222 1
Q ss_pred eccccceEEEEEecCCCCeEEEEeCC------CeEEEEeCCCCCcee--eeccCccceEEEEecCCCCcEEEEEec----
Q 021121 146 KEHAYCVYNATWNPRHSDVFCSASGD------CTLRIWDVREMGSTM--IIPAHEFEILACDWNKYDDCLIASASV---- 213 (317)
Q Consensus 146 ~~~~~~v~~~~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~--~~~~~~~~v~~i~~~~~~~~~l~~~~~---- 213 (317)
.........+.+ + +.+++.|+.+ ..+.+||+.+.+-.. .+....... +++.. ++.+++.|+.
T Consensus 89 p~~r~~~~~~~~--~-~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~--~~~iyv~GG~~~~~ 162 (306)
T 3ii7_A 89 PTPRDSLAACAA--E-GKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSH-GMVEA--NGLIYVCGGSLGNN 162 (306)
T ss_dssp SSCCBSCEEEEE--T-TEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSC-EEEEE--TTEEEEECCEESCT
T ss_pred CccccceeEEEE--C-CEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCccee-EEEEE--CCEEEEECCCCCCC
Confidence 111111222222 3 6777777765 458899988753211 111111111 22222 5677777764
Q ss_pred -----CCcEEEEEccCCCccEEEEecCCC--ceeEEEecCCCCeeEEeeecC-----CeEEEEecccccc-eeeeeeccc
Q 021121 214 -----DKSIKIWDVRNYRVPIAVLNGHGY--AVRKVKFSPHRRNLLASCSYD-----MTVCLWDFMVEDA-LVGRYDHHT 280 (317)
Q Consensus 214 -----d~~i~v~d~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~l~~~~~d-----~~i~vwd~~~~~~-~~~~~~~~~ 280 (317)
-..+.+||..+.+ -..+..... .-.+++.. +++ +++.|+.+ ..+.+||+.+.+- .+..+....
T Consensus 163 ~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~-~~~-i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r 238 (306)
T 3ii7_A 163 VSGRVLNSCEVYDPATET--WTELCPMIEARKNHGLVFV-KDK-IFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKG 238 (306)
T ss_dssp TTCEECCCEEEEETTTTE--EEEECCCSSCCBSCEEEEE-TTE-EEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCB
T ss_pred CcccccceEEEeCCCCCe--EEECCCccchhhcceEEEE-CCE-EEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCc
Confidence 3458899987753 222221111 11122222 444 67777653 3588899877641 111111111
Q ss_pred ceeEeEEEEeccCCeEEEeecC-----CcEEEEecCCC
Q 021121 281 EFAVGVDMSVLVEGLLASTGWD-----ELVYVWQQGMD 313 (317)
Q Consensus 281 ~~v~~~~~~~~~~~~l~s~~~d-----g~i~~w~~~~~ 313 (317)
.....+.+ + +.+++.||.+ ..+.+||+..+
T Consensus 239 ~~~~~~~~--~-~~i~v~GG~~~~~~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 239 VTVKCAAV--G-SIVYVLAGFQGVGRLGHILEYNTETD 273 (306)
T ss_dssp SCCEEEEE--T-TEEEEEECBCSSSBCCEEEEEETTTT
T ss_pred cceeEEEE--C-CEEEEEeCcCCCeeeeeEEEEcCCCC
Confidence 11112222 3 6788888854 46778887653
No 307
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.96 E-value=0.0019 Score=51.22 Aligned_cols=221 Identities=12% Similarity=0.120 Sum_probs=108.0
Q ss_pred CeEEEEE-cC-----CeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCC-----CEEEEEEcCCCc--
Q 021121 74 SLLIAAV-AD-----GSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWD-----DTVKLWTVDRPT-- 140 (317)
Q Consensus 74 ~~l~~~~-~d-----g~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~v~iwd~~~~~-- 140 (317)
.+++.|+ .+ ..+.+||..+. ....+..+.........+. .++. +++.|+.+ ..+.+||+.+.+
T Consensus 16 ~i~~~GG~~~~~~~~~~~~~~d~~~~-~W~~~~~~p~~r~~~~~~~--~~~~-l~v~GG~~~~~~~~~~~~~d~~~~~~~ 91 (301)
T 2vpj_A 16 VLLVVGGFGSQQSPIDVVEKYDPKTQ-EWSFLPSITRKRRYVASVS--LHDR-IYVIGGYDGRSRLSSVECLDYTADEDG 91 (301)
T ss_dssp EEEEECCEETTTEECCCEEEEETTTT-EEEECCCCSSCCBSCEEEE--ETTE-EEEECCBCSSCBCCCEEEEETTCCTTC
T ss_pred EEEEEeCccCCCcceeEEEEEcCCCC-eEEeCCCCChhhccccEEE--ECCE-EEEEcCCCCCccCceEEEEECCCCCCC
Confidence 4555665 32 35778887653 2222222221111112222 2344 67777654 468999988765
Q ss_pred -eeEE--eeccccceEEEEEecCCCCeEEEEeCC-----CeEEEEeCCCCCce--eeeccCccceEEEEecCCCCcEEEE
Q 021121 141 -SVRT--FKEHAYCVYNATWNPRHSDVFCSASGD-----CTLRIWDVREMGST--MIIPAHEFEILACDWNKYDDCLIAS 210 (317)
Q Consensus 141 -~~~~--~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~--~~~~~~~~~v~~i~~~~~~~~~l~~ 210 (317)
-... +.........+.+ + +.+++.|+.+ ..+.+||+.+.+-. ..+....... +++.. ++.+++.
T Consensus 92 ~W~~~~~~p~~r~~~~~~~~--~-~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~--~~~iyv~ 165 (301)
T 2vpj_A 92 VWYSVAPMNVRRGLAGATTL--G-DMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGA-GLVVA--SGVIYCL 165 (301)
T ss_dssp CCEEECCCSSCCBSCEEEEE--T-TEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSC-EEEEE--TTEEEEE
T ss_pred eeEECCCCCCCccceeEEEE--C-CEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccc-eEEEE--CCEEEEE
Confidence 2221 1111111222222 3 6777777654 35889998765322 2222111111 22222 5678888
Q ss_pred EecC-----CcEEEEEccCCCccEEEEecCC---CceeEEEecCCCCeeEEeeecC-----CeEEEEecccccc-eeeee
Q 021121 211 ASVD-----KSIKIWDVRNYRVPIAVLNGHG---YAVRKVKFSPHRRNLLASCSYD-----MTVCLWDFMVEDA-LVGRY 276 (317)
Q Consensus 211 ~~~d-----~~i~v~d~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~l~~~~~d-----~~i~vwd~~~~~~-~~~~~ 276 (317)
|+.+ ..+.+||..+.+ -..+.... .....+.+ +++ +++.|+.+ ..+.+||+.+.+- .+..+
T Consensus 166 GG~~~~~~~~~~~~~d~~~~~--W~~~~~~p~~r~~~~~~~~--~~~-i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~ 240 (301)
T 2vpj_A 166 GGYDGLNILNSVEKYDPHTGH--WTNVTPMATKRSGAGVALL--NDH-IYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSM 240 (301)
T ss_dssp CCBCSSCBCCCEEEEETTTTE--EEEECCCSSCCBSCEEEEE--TTE-EEEECCBCSSSBCCCEEEEETTTTEEEEECCC
T ss_pred CCCCCCcccceEEEEeCCCCc--EEeCCCCCcccccceEEEE--CCE-EEEEeCCCCCcccceEEEEeCCCCcEEECCCC
Confidence 7755 358899987653 22222111 11122222 344 77777764 4688999887651 11111
Q ss_pred ecccceeEeEEEEeccCCeEEEeecC-----CcEEEEecCC
Q 021121 277 DHHTEFAVGVDMSVLVEGLLASTGWD-----ELVYVWQQGM 312 (317)
Q Consensus 277 ~~~~~~v~~~~~~~~~~~~l~s~~~d-----g~i~~w~~~~ 312 (317)
....... +++ ..+ +.+++.||.+ ..+.+||+..
T Consensus 241 p~~r~~~-~~~-~~~-~~i~v~GG~~~~~~~~~v~~yd~~~ 278 (301)
T 2vpj_A 241 TTPRCYV-GAT-VLR-GRLYAIAGYDGNSLLSSIECYDPII 278 (301)
T ss_dssp SSCCBSC-EEE-EET-TEEEEECCBCSSSBEEEEEEEETTT
T ss_pred CCcccce-eEE-EEC-CEEEEEcCcCCCcccccEEEEcCCC
Confidence 1111111 122 223 6677888765 3567777765
No 308
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.94 E-value=0.002 Score=51.15 Aligned_cols=183 Identities=13% Similarity=0.092 Sum_probs=90.6
Q ss_pred CCCCEEEEEcCC-----CEEEEEEcCCCceeEE--eeccccceEEEEEecCCCCeEEEEeCCC-----eEEEEeCCCCCc
Q 021121 117 TRRDSFITSSWD-----DTVKLWTVDRPTSVRT--FKEHAYCVYNATWNPRHSDVFCSASGDC-----TLRIWDVREMGS 184 (317)
Q Consensus 117 ~~~~~l~~~~~d-----g~v~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~ 184 (317)
++. +++.|+.+ ..+.+||+.+.+-... +.........+.+ + +.+++.|+.++ .+.+||+.+.+-
T Consensus 61 ~~~-lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~-~~iyv~GG~~~~~~~~~~~~~d~~~~~W 136 (302)
T 2xn4_A 61 AGL-VFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL--N-GLLYAVGGFDGSTGLSSVEAYNIKSNEW 136 (302)
T ss_dssp TTE-EEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--T-TEEEEEEEECSSCEEEEEEEEETTTTEE
T ss_pred CCE-EEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE--C-CEEEEEcCCCCCccCceEEEEeCCCCeE
Confidence 344 67777654 3588899877642221 1111111222222 3 67777777553 578888876532
Q ss_pred ee--eeccCccceEEEEecCCCCcEEEEEecC-------CcEEEEEccCCCccEEEEecC--CCceeEEEecCCCCeeEE
Q 021121 185 TM--IIPAHEFEILACDWNKYDDCLIASASVD-------KSIKIWDVRNYRVPIAVLNGH--GYAVRKVKFSPHRRNLLA 253 (317)
Q Consensus 185 ~~--~~~~~~~~v~~i~~~~~~~~~l~~~~~d-------~~i~v~d~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~l~ 253 (317)
.. .+...... .+++.. ++.+++.|+.+ ..+.+||..+.+ -..+... ...-.+++.. +++ +++
T Consensus 137 ~~~~~~p~~r~~-~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~-~~~-iyv 209 (302)
T 2xn4_A 137 FHVAPMNTRRSS-VGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNE--WTYIAEMSTRRSGAGVGVL-NNL-LYA 209 (302)
T ss_dssp EEECCCSSCCBS-CEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTE--EEEECCCSSCCBSCEEEEE-TTE-EEE
T ss_pred eecCCCCCcccC-ceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCc--EEECCCCccccccccEEEE-CCE-EEE
Confidence 11 11111111 122222 56777777643 358899987643 2222111 1111122222 444 777
Q ss_pred eeecC-----CeEEEEecccccc-eeeeeecccceeEeEEEEeccCCeEEEeecCC-----cEEEEecCCC
Q 021121 254 SCSYD-----MTVCLWDFMVEDA-LVGRYDHHTEFAVGVDMSVLVEGLLASTGWDE-----LVYVWQQGMD 313 (317)
Q Consensus 254 ~~~~d-----~~i~vwd~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg-----~i~~w~~~~~ 313 (317)
.|+.+ ..+.+||+.+.+- .+..+...... .+++. .+ +.+++.||.++ .+.+||+..+
T Consensus 210 ~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~-~~~~~-~~-~~i~v~GG~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 210 VGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRN-AGVCA-VN-GLLYVVGGDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp ECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBS-CEEEE-ET-TEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred ECCCCCCcccceEEEEeCCCCCEeeCCCCCCcccc-CeEEE-EC-CEEEEECCcCCCcccccEEEEcCCCC
Confidence 77754 3688999877641 11111111111 11222 23 67788887654 4788887653
No 309
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.94 E-value=0.015 Score=55.06 Aligned_cols=208 Identities=12% Similarity=0.029 Sum_probs=109.8
Q ss_pred CceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCC-----CCeEEEEEc-CCeEEEEEeCCCCCCCCcee--eccCCc
Q 021121 36 NGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESH-----DSLLIAAVA-DGSVKIYDTALPPTANPIRS--LHEHTR 107 (317)
Q Consensus 36 ~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-----~~~l~~~~~-dg~i~v~~~~~~~~~~~~~~--~~~~~~ 107 (317)
.+.+.+++++.+. +...........|.|+++.|.. ..++++|.. |++|+|+++... +.+.. +.. ..
T Consensus 531 g~~l~~fel~~~~--L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l---~~~~~~~L~~-~~ 604 (1158)
T 3ei3_A 531 GRALYYLQIHPQE--LRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSF---ELLHKEMLGG-EI 604 (1158)
T ss_dssp TTEEEEEEEETTE--EEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTC---CEEEEEECCS-SC
T ss_pred CCEEEEEEeeCCc--eeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCC---CeEEEEECCC-CC
Confidence 4577788877542 4444445567789999998643 258999996 999999999743 32221 211 12
Q ss_pred ceEEEEEec-CCCCEEEEEcCCCEEEEEEcC--CCceeEE--eeccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCC
Q 021121 108 EVHSADYNP-TRRDSFITSSWDDTVKLWTVD--RPTSVRT--FKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREM 182 (317)
Q Consensus 108 ~v~~~~~~~-~~~~~l~~~~~dg~v~iwd~~--~~~~~~~--~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 182 (317)
...++.+.. .+..+|..|-.||.+.-+.++ +++.... ..-...++.-..+...+...+++++ +.-..+|.-+ +
T Consensus 605 ~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~LG~~pv~L~~~~~~~~~~V~a~s-~rp~liy~~~-~ 682 (1158)
T 3ei3_A 605 IPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACS-DRPTVIYSSN-H 682 (1158)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEEEEECCSSCCEEEEEESSSCEEEEEES-SSCEEEEESS-S
T ss_pred CCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccccceeEEcCCCceEEEEEeeCCceeEEEEC-CCCEEEEEcC-C
Confidence 334443321 233488899999998766554 4433221 1112334444444444233333333 3444444433 2
Q ss_pred CceeeeccCccceE-EEEecCCC-CcEEEEEecCCcEEEEEccCCCccEEEEecCCCceeEEEecCCCCeeEE
Q 021121 183 GSTMIIPAHEFEIL-ACDWNKYD-DCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLA 253 (317)
Q Consensus 183 ~~~~~~~~~~~~v~-~i~~~~~~-~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 253 (317)
+.... ...-..+. ...|+... ..-++..+ ++.++|..+...+........-...++.++++|..+.+.+
T Consensus 683 ~l~~s-~l~~~~v~~~~~F~se~~~~g~v~~~-~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~~~~~~~v 753 (1158)
T 3ei3_A 683 KLVFS-NVNLKEVNYMCPLNSDGYPDSLALAN-NSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGV 753 (1158)
T ss_dssp SEEEE-EBSSSCCCEEEEECCSSSTTEEEEEC-SSCEEEEEECCSSSEEEEEEECSSEEEEEEEEGGGTEEEE
T ss_pred ceEEe-ccChHHhceEeccCcccCCCcEEEEc-CCceEEEEecccCCeeEEEEeCCCCceEEEEcCCCCEEEE
Confidence 22211 11111222 23343211 23344443 4569999886543322222234567889999998774333
No 310
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.93 E-value=0.0056 Score=49.88 Aligned_cols=232 Identities=12% Similarity=0.110 Sum_probs=125.4
Q ss_pred CCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceee---ccCCcceEEEEEecC---CCCEEEEEcC---C--
Q 021121 60 ADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSL---HEHTREVHSADYNPT---RRDSFITSSW---D-- 128 (317)
Q Consensus 60 ~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~---~~~~l~~~~~---d-- 128 (317)
-.....|+|.|++ . |+++..+|.|.+++. .+ . ..+..+ .........|+++|+ +..++++-+. +
T Consensus 28 l~~P~~ia~~pdG-~-l~V~e~~g~I~~~d~-~G-~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~ 102 (354)
T 3a9g_A 28 LEVPWSIAPLGGG-R-YLVTERPGRLVLISP-SG-K-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGH 102 (354)
T ss_dssp CSCEEEEEEEETT-E-EEEEETTTEEEEECS-SC-E-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGC
T ss_pred CCCCeEEEEcCCC-e-EEEEeCCCEEEEEeC-CC-c-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCC
Confidence 3457889999998 3 555667799998862 22 1 222211 112346789999997 4423343332 3
Q ss_pred --CEEEEEEcCCC--ce-----e-EEeec-cccceEEEEEecCCCCeEEEEeC-------------CCeEEEEeCCCC--
Q 021121 129 --DTVKLWTVDRP--TS-----V-RTFKE-HAYCVYNATWNPRHSDVFCSASG-------------DCTLRIWDVREM-- 182 (317)
Q Consensus 129 --g~v~iwd~~~~--~~-----~-~~~~~-~~~~v~~~~~~~~~~~~l~~~~~-------------dg~i~i~d~~~~-- 182 (317)
..|..|+.... .. + ..+.. .......++|.|+ +.+.++.+. .|.|.-++....
T Consensus 103 ~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pD-G~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p 181 (354)
T 3a9g_A 103 IRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPD-GMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPP 181 (354)
T ss_dssp EEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTT-SCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCC
T ss_pred cceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCC-CcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCC
Confidence 67888887654 11 1 11221 1123567999998 676666432 256666665432
Q ss_pred ------CceeeeccCccceEEEEecCCCCcEEEEEecCC---cEEEEEccC---------------CCccEEEEecCCCc
Q 021121 183 ------GSTMIIPAHEFEILACDWNKYDDCLIASASVDK---SIKIWDVRN---------------YRVPIAVLNGHGYA 238 (317)
Q Consensus 183 ------~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~---~i~v~d~~~---------------~~~~~~~~~~~~~~ 238 (317)
.....-.++.. ...++|+|.++.++++-.... .|.+..... ...++..+......
T Consensus 182 ~~npf~~~~i~a~G~rn-p~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~a 260 (354)
T 3a9g_A 182 ADNPFPNSPIWSYGHRN-PQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWA 260 (354)
T ss_dssp TTSSSTTCCEEEECCSC-CCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCC
T ss_pred CCCCCCCCcEEEEccCC-cceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcC
Confidence 01111123333 457899985555555433222 244332111 01223333112235
Q ss_pred eeEEEec-------CCCCeeEEeeecCCeEEEEeccccccee--ee-eecccceeEeEEEEeccCCeEEEee
Q 021121 239 VRKVKFS-------PHRRNLLASCSYDMTVCLWDFMVEDALV--GR-YDHHTEFAVGVDMSVLVEGLLASTG 300 (317)
Q Consensus 239 v~~~~~~-------~~~~~~l~~~~~d~~i~vwd~~~~~~~~--~~-~~~~~~~v~~~~~~~~~~~~l~s~~ 300 (317)
...++|. .++. ++++.-..+.|...++....... .. +......+..+++.|+ +.++++..
T Consensus 261 p~G~~~y~g~~fp~~~G~-l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pD-G~lyv~~~ 330 (354)
T 3a9g_A 261 PSGASFVHGDMFPGLRGW-LLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDD-GGILISTS 330 (354)
T ss_dssp EEEEEECCSSSCGGGTTE-EEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTT-SCEEEEEC
T ss_pred CcceEEECCCCCcccCCc-EEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCC-CcEEEEEe
Confidence 6788884 4554 66666667788888887543221 12 2222456899999998 56665553
No 311
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.92 E-value=0.0052 Score=49.47 Aligned_cols=229 Identities=9% Similarity=-0.015 Sum_probs=120.6
Q ss_pred CCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCcee-eccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcC
Q 021121 59 TADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRS-LHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVD 137 (317)
Q Consensus 59 ~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~ 137 (317)
....+.++.|.+.+ ..++ .+..|.| +...+.++..+.+.. .......+.++.+.+ +. .++ ++.+|.|.. ..+
T Consensus 34 ~~~~~~~v~~~~~~-~~~~-~G~~g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~-~~~-~g~~g~i~~-S~D 106 (327)
T 2xbg_A 34 TTATILDMSFIDRH-HGWL-VGVNATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NE-GWI-VGEPPIMLH-TTD 106 (327)
T ss_dssp CSSCEEEEEESSSS-CEEE-EETTTEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEET-TE-EEE-EEETTEEEE-ESS
T ss_pred CCCcEEEEEECCCC-cEEE-EcCCCeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecC-Ce-EEE-EECCCeEEE-ECC
Confidence 34578999998665 4555 4567754 223333323332221 112345788999986 33 444 455675544 333
Q ss_pred CCceeEEeec---cccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeee-ccCccceEEEEecCCCCcEEEEEec
Q 021121 138 RPTSVRTFKE---HAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMII-PAHEFEILACDWNKYDDCLIASASV 213 (317)
Q Consensus 138 ~~~~~~~~~~---~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~v~~i~~~~~~~~~l~~~~~ 213 (317)
.++.-..... ....+..+.+.++ +.++++ +.+|.|..- ...++.-... ......+..+.+.| ++.+++.+.
T Consensus 107 gG~tW~~~~~~~~~~~~~~~i~~~~~-~~~~~~-~~~g~v~~S-~DgG~tW~~~~~~~~~~~~~~~~~~-~~~~~~~g~- 181 (327)
T 2xbg_A 107 GGQSWSQIPLDPKLPGSPRLIKALGN-GSAEMI-TNVGAIYRT-KDSGKNWQALVQEAIGVMRNLNRSP-SGEYVAVSS- 181 (327)
T ss_dssp TTSSCEECCCCTTCSSCEEEEEEEET-TEEEEE-ETTCCEEEE-SSTTSSEEEEECSCCCCEEEEEECT-TSCEEEEET-
T ss_pred CCCCceECccccCCCCCeEEEEEECC-CCEEEE-eCCccEEEE-cCCCCCCEEeecCCCcceEEEEEcC-CCcEEEEEC-
Confidence 3444333321 2345777887765 555544 456654321 2223332222 23445688999998 777777664
Q ss_pred CCcEEE-EEccCCCccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeee-c---ccceeEeEEE
Q 021121 214 DKSIKI-WDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYD-H---HTEFAVGVDM 288 (317)
Q Consensus 214 d~~i~v-~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~-~---~~~~v~~~~~ 288 (317)
++.+.. .|-. +..-..........+..+.+.+++. ++ .++.+|.+.+.+...++. ..... . +...+..+.+
T Consensus 182 ~G~~~~S~d~g-G~tW~~~~~~~~~~~~~~~~~~~g~-~~-~~~~~G~~~~s~~D~G~t-W~~~~~~~~~~~~~~~~v~~ 257 (327)
T 2xbg_A 182 RGSFYSTWEPG-QTAWEPHNRTTSRRLHNMGFTPDGR-LW-MIVNGGKIAFSDPDNSEN-WGELLSPLRRNSVGFLDLAY 257 (327)
T ss_dssp TSSEEEEECTT-CSSCEEEECCSSSCEEEEEECTTSC-EE-EEETTTEEEEEETTEEEE-ECCCBCTTSSCCSCEEEEEE
T ss_pred CCcEEEEeCCC-CCceeECCCCCCCccceeEECCCCC-EE-EEeCCceEEEecCCCCCe-eEeccCCcccCCcceEEEEe
Confidence 454443 3321 1211111233456788999999886 34 455678877764222321 11111 1 2235788888
Q ss_pred EeccCCeEEEeecCCcE
Q 021121 289 SVLVEGLLASTGWDELV 305 (317)
Q Consensus 289 ~~~~~~~l~s~~~dg~i 305 (317)
.++ +.+++++ .+|.|
T Consensus 258 ~~~-~~~~~~g-~~g~i 272 (327)
T 2xbg_A 258 RTP-NEVWLAG-GAGAL 272 (327)
T ss_dssp SSS-SCEEEEE-STTCE
T ss_pred cCC-CEEEEEe-CCCeE
Confidence 875 5555544 46766
No 312
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.85 E-value=0.0064 Score=48.18 Aligned_cols=216 Identities=11% Similarity=0.114 Sum_probs=106.6
Q ss_pred ceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcC-----CeEEEEEeCCCCC--CCCceeeccCCcce
Q 021121 37 GRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVAD-----GSVKIYDTALPPT--ANPIRSLHEHTREV 109 (317)
Q Consensus 37 g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~i~v~~~~~~~~--~~~~~~~~~~~~~v 109 (317)
..+.+||..... ...+........-.+++.. ++ .+++.|+.+ ..+.+||..+... ...+..+.......
T Consensus 31 ~~~~~~d~~~~~--W~~~~~~p~~r~~~~~~~~-~~-~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~ 106 (301)
T 2vpj_A 31 DVVEKYDPKTQE--WSFLPSITRKRRYVASVSL-HD-RIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLA 106 (301)
T ss_dssp CCEEEEETTTTE--EEECCCCSSCCBSCEEEEE-TT-EEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSC
T ss_pred eEEEEEcCCCCe--EEeCCCCChhhccccEEEE-CC-EEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccce
Confidence 468888887653 2222222222111222222 33 577777754 4588889876420 22222222212222
Q ss_pred EEEEEecCCCCEEEEEcCC-----CEEEEEEcCCCceeE--EeeccccceEEEEEecCCCCeEEEEeCC-----CeEEEE
Q 021121 110 HSADYNPTRRDSFITSSWD-----DTVKLWTVDRPTSVR--TFKEHAYCVYNATWNPRHSDVFCSASGD-----CTLRIW 177 (317)
Q Consensus 110 ~~~~~~~~~~~~l~~~~~d-----g~v~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~i~i~ 177 (317)
..+.+ ++. +++.|+.+ ..+.+||+.+.+-.. .+.........+.+ + +.+++.|+.+ ..+.+|
T Consensus 107 ~~~~~--~~~-lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~-~~iyv~GG~~~~~~~~~~~~~ 180 (301)
T 2vpj_A 107 GATTL--GDM-IYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--S-GVIYCLGGYDGLNILNSVEKY 180 (301)
T ss_dssp EEEEE--TTE-EEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--T-TEEEEECCBCSSCBCCCEEEE
T ss_pred eEEEE--CCE-EEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--C-CEEEEECCCCCCcccceEEEE
Confidence 22222 444 66666643 368899988764322 22211111222222 3 6777777654 458899
Q ss_pred eCCCCCcee--eeccCccceEEEEecCCCCcEEEEEecC-----CcEEEEEccCCCccEEEEecC---CCceeEEEecCC
Q 021121 178 DVREMGSTM--IIPAHEFEILACDWNKYDDCLIASASVD-----KSIKIWDVRNYRVPIAVLNGH---GYAVRKVKFSPH 247 (317)
Q Consensus 178 d~~~~~~~~--~~~~~~~~v~~i~~~~~~~~~l~~~~~d-----~~i~v~d~~~~~~~~~~~~~~---~~~v~~~~~~~~ 247 (317)
|+.+.+-.. .+....... ++... ++.+++.|+.+ ..+.+||+.+.+ -..+... ......+.+ +
T Consensus 181 d~~~~~W~~~~~~p~~r~~~-~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~--~ 253 (301)
T 2vpj_A 181 DPHTGHWTNVTPMATKRSGA-GVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDS--WTTVTSMTTPRCYVGATVL--R 253 (301)
T ss_dssp ETTTTEEEEECCCSSCCBSC-EEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTE--EEEECCCSSCCBSCEEEEE--T
T ss_pred eCCCCcEEeCCCCCcccccc-eEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCc--EEECCCCCCcccceeEEEE--C
Confidence 987653221 111111111 22222 56788888764 468999988654 2222211 111122222 4
Q ss_pred CCeeEEeeecC-----CeEEEEeccccc
Q 021121 248 RRNLLASCSYD-----MTVCLWDFMVED 270 (317)
Q Consensus 248 ~~~~l~~~~~d-----~~i~vwd~~~~~ 270 (317)
++ +++.|+.+ ..+.+||+.+.+
T Consensus 254 ~~-i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 254 GR-LYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp TE-EEEECCBCSSSBEEEEEEEETTTTE
T ss_pred CE-EEEEcCcCCCcccccEEEEcCCCCe
Confidence 54 67777755 357788877654
No 313
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.85 E-value=0.0067 Score=48.23 Aligned_cols=216 Identities=5% Similarity=0.016 Sum_probs=106.5
Q ss_pred CceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcC----CeEEEEEeCCCCCCCCceeeccCCcceEE
Q 021121 36 NGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVAD----GSVKIYDTALPPTANPIRSLHEHTREVHS 111 (317)
Q Consensus 36 ~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d----g~i~v~~~~~~~~~~~~~~~~~~~~~v~~ 111 (317)
...+.+||..... ...+........-.+++.. ++ .+++.|+.+ ..+.+||..+. ....+..+.........
T Consensus 23 ~~~~~~~d~~~~~--W~~~~~~p~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~d~~~~-~W~~~~~~p~~r~~~~~ 97 (306)
T 3ii7_A 23 PQSCRYFNPKDYS--WTDIRCPFEKRRDAACVFW-DN-VVYILGGSQLFPIKRMDCYNVVKD-SWYSKLGPPTPRDSLAA 97 (306)
T ss_dssp TTSEEEEETTTTE--EEECCCCSCCCBSCEEEEE-TT-EEEEECCBSSSBCCEEEEEETTTT-EEEEEECCSSCCBSCEE
T ss_pred CceEEEecCCCCC--EecCCCCCcccceeEEEEE-CC-EEEEEeCCCCCCcceEEEEeCCCC-eEEECCCCCccccceeE
Confidence 4578888887654 2222222221111222222 33 577777654 56888887654 22222222211112222
Q ss_pred EEEecCCCCEEEEEcCC------CEEEEEEcCCCceeEE--eeccccceEEEEEecCCCCeEEEEeC---------CCeE
Q 021121 112 ADYNPTRRDSFITSSWD------DTVKLWTVDRPTSVRT--FKEHAYCVYNATWNPRHSDVFCSASG---------DCTL 174 (317)
Q Consensus 112 ~~~~~~~~~~l~~~~~d------g~v~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~l~~~~~---------dg~i 174 (317)
+.+ ++. +++.|+.+ ..+.+||+.+.+-... +.........+.+ + +.+++.|+. -..+
T Consensus 98 ~~~--~~~-iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~-~~iyv~GG~~~~~~~~~~~~~~ 171 (306)
T 3ii7_A 98 CAA--EGK-IYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA--N-GLIYVCGGSLGNNVSGRVLNSC 171 (306)
T ss_dssp EEE--TTE-EEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--T-TEEEEECCEESCTTTCEECCCE
T ss_pred EEE--CCE-EEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE--C-CEEEEECCCCCCCCcccccceE
Confidence 222 444 66777654 4688999887643221 1111111122222 3 667767654 3458
Q ss_pred EEEeCCCCCce--eeeccCccceEEEEecCCCCcEEEEEecC-----CcEEEEEccCCCccEEEEec---CCCceeEEEe
Q 021121 175 RIWDVREMGST--MIIPAHEFEILACDWNKYDDCLIASASVD-----KSIKIWDVRNYRVPIAVLNG---HGYAVRKVKF 244 (317)
Q Consensus 175 ~i~d~~~~~~~--~~~~~~~~~v~~i~~~~~~~~~l~~~~~d-----~~i~v~d~~~~~~~~~~~~~---~~~~v~~~~~ 244 (317)
.+||+.+.+=. ..+...... .++... ++++++.|+.+ ..+.+||..+.+ -..+.. .......+.+
T Consensus 172 ~~yd~~~~~W~~~~~~p~~r~~-~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~ 246 (306)
T 3ii7_A 172 EVYDPATETWTELCPMIEARKN-HGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNE--WKMVSPMPWKGVTVKCAAV 246 (306)
T ss_dssp EEEETTTTEEEEECCCSSCCBS-CEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTE--EEECCCCSCCBSCCEEEEE
T ss_pred EEeCCCCCeEEECCCccchhhc-ceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCc--EEECCCCCCCccceeEEEE
Confidence 89998875321 111111111 122222 56777777654 358899987643 222211 1112222333
Q ss_pred cCCCCeeEEeeecC-----CeEEEEeccccc
Q 021121 245 SPHRRNLLASCSYD-----MTVCLWDFMVED 270 (317)
Q Consensus 245 ~~~~~~~l~~~~~d-----~~i~vwd~~~~~ 270 (317)
+++ +++.|+.+ ..+.+||..+.+
T Consensus 247 --~~~-i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 247 --GSI-VYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp --TTE-EEEEECBCSSSBCCEEEEEETTTTE
T ss_pred --CCE-EEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 444 77777744 568888887764
No 314
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.79 E-value=0.0074 Score=49.17 Aligned_cols=136 Identities=8% Similarity=-0.105 Sum_probs=60.6
Q ss_pred CEEEEEEcCCCceeEE--eeccccceEEEEEecCCCCeEEEEeC------CCeEEEEeC--CCCC--ceeeeccCccce-
Q 021121 129 DTVKLWTVDRPTSVRT--FKEHAYCVYNATWNPRHSDVFCSASG------DCTLRIWDV--REMG--STMIIPAHEFEI- 195 (317)
Q Consensus 129 g~v~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~l~~~~~------dg~i~i~d~--~~~~--~~~~~~~~~~~v- 195 (317)
..+.+||+.+.+-... +......-.+++.. + +.+++.|+. ...+..||+ .+.+ .+..+.......
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~-~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~ 245 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK-G-DKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAG 245 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEE-T-TEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBS
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEE-C-CEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCccccc
Confidence 5789999987643222 22111110223322 2 567777654 345777876 3321 111111111111
Q ss_pred EEEEecCCCCcEEEEEecC----------------------CcEEEEEccCCCcc-EEEEecCCCceeEEEecCCCCeeE
Q 021121 196 LACDWNKYDDCLIASASVD----------------------KSIKIWDVRNYRVP-IAVLNGHGYAVRKVKFSPHRRNLL 252 (317)
Q Consensus 196 ~~i~~~~~~~~~l~~~~~d----------------------~~i~v~d~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~l 252 (317)
.++... ++.+++.|+.+ ..+.+||+.+.+-. +..+........++. .+++ ++
T Consensus 246 ~~~~~~--~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~-i~ 320 (357)
T 2uvk_A 246 GFAGIS--NDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLP--WNNS-LL 320 (357)
T ss_dssp CEEEEE--TTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEEE--ETTE-EE
T ss_pred ceEEEE--CCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeEE--eCCE-EE
Confidence 112222 56777777742 25778998765421 111211111112222 2455 67
Q ss_pred EeeecCC------eEEEEecccccc
Q 021121 253 ASCSYDM------TVCLWDFMVEDA 271 (317)
Q Consensus 253 ~~~~~d~------~i~vwd~~~~~~ 271 (317)
+.|+.++ .+.++++++++.
T Consensus 321 v~GG~~~~~~~~~~v~~l~~~~~~~ 345 (357)
T 2uvk_A 321 IIGGETAGGKAVTDSVLITVKDNKV 345 (357)
T ss_dssp EEEEECGGGCEEEEEEEEEC-CCSC
T ss_pred EEeeeCCCCCEeeeEEEEEEcCcEe
Confidence 7777543 355567777663
No 315
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=97.75 E-value=0.013 Score=48.57 Aligned_cols=274 Identities=7% Similarity=-0.075 Sum_probs=130.2
Q ss_pred CCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCe--EEEEEeCC-CCCC
Q 021121 20 ESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGS--VKIYDTAL-PPTA 96 (317)
Q Consensus 20 ~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~--i~v~~~~~-~~~~ 96 (317)
++.+.+++. .| +.+++...................|.+|++.|..+..+.++...|. -.||.... +...
T Consensus 22 ~g~l~vgt~-------~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW 93 (394)
T 3b7f_A 22 PVMLLVATI-------KG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNW 93 (394)
T ss_dssp CCEEEEEET-------TE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCC
T ss_pred CCEEEEEec-------Cc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCc
Confidence 567777765 45 5566554322234333222234579999999833345555655541 12333332 2222
Q ss_pred CCcee---ecc--------CCcceEEEEEecCC-CCEEEEEcCCCEEEEEEcCCCceeEEeec-----------------
Q 021121 97 NPIRS---LHE--------HTREVHSADYNPTR-RDSFITSSWDDTVKLWTVDRPTSVRTFKE----------------- 147 (317)
Q Consensus 97 ~~~~~---~~~--------~~~~v~~~~~~~~~-~~~l~~~~~dg~v~iwd~~~~~~~~~~~~----------------- 147 (317)
..+.. +.. ....|.++++.|.. ...+.++...+.|...+ +.++.-..+..
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g 172 (394)
T 3b7f_A 94 TEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDG 172 (394)
T ss_dssp EECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC---
T ss_pred eECCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEc-CCCCCeEECcCccCCccccccccccccC
Confidence 22211 111 11357788998742 33566666566665543 22333222211
Q ss_pred --cccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeecc-C------------ccceEEEEecCCCCcEEEEEe
Q 021121 148 --HAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPA-H------------EFEILACDWNKYDDCLIASAS 212 (317)
Q Consensus 148 --~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~------------~~~v~~i~~~~~~~~~l~~~~ 212 (317)
....+.+|.+.|.+...++.+..++.|...+ ..++.-..+.. . ...+.++.++|.++..+.++.
T Consensus 173 ~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~-DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~ 251 (394)
T 3b7f_A 173 TPDGPKMHSILVDPRDPKHLYIGMSSGGVFEST-DAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQN 251 (394)
T ss_dssp -CCCCEEEEEEECTTCTTCEEEEEETBEEEEES-STTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEE
T ss_pred CCCCCceeEEEECCCCCCEEEEEECCCCEEEEC-CCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEc
Confidence 1235789999985455555665555554443 22222222210 0 124788999985556676666
Q ss_pred cCCcEEEEEccCCCccEEEEec--CC---CceeEEEecCCCCeeEEeeec-----------CCeEEEEecccccceeeee
Q 021121 213 VDKSIKIWDVRNYRVPIAVLNG--HG---YAVRKVKFSPHRRNLLASCSY-----------DMTVCLWDFMVEDALVGRY 276 (317)
Q Consensus 213 ~d~~i~v~d~~~~~~~~~~~~~--~~---~~v~~~~~~~~~~~~l~~~~~-----------d~~i~vwd~~~~~~~~~~~ 276 (317)
..+ |...+ ........+.. .. ..+..++++|.....|..+.. ++...+|....+......+
T Consensus 252 ~~g-l~~s~--D~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~ 328 (394)
T 3b7f_A 252 HCG-IYRMD--RREGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQ 328 (394)
T ss_dssp TTE-EEEEE--TTTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEE
T ss_pred CCe-EEEeC--CCCCcceECCCCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceEC
Confidence 544 44433 21111222211 11 235678888743333444431 2334566554432122221
Q ss_pred e-ccc--c-----eeEeEEEEeccCCeEEEeecCCcEE
Q 021121 277 D-HHT--E-----FAVGVDMSVLVEGLLASTGWDELVY 306 (317)
Q Consensus 277 ~-~~~--~-----~v~~~~~~~~~~~~l~s~~~dg~i~ 306 (317)
. +-. . ....++++|.++..|+.++.++.|.
T Consensus 329 ~~glp~~~~~~~~~~~~~~~~p~~~~~l~~g~~~g~l~ 366 (394)
T 3b7f_A 329 DRGLPTDQAWLTVKRQAMTADAHAPVGVYFGTTGGEIW 366 (394)
T ss_dssp CBTSCCSSCCCCCCTBSEEECCSSSCCEEEECTTSCEE
T ss_pred CCCCCCccccceEEEEEEEECCCCCCEEEEEeCCCeEE
Confidence 1 101 0 1135778876445566666566554
No 316
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.74 E-value=0.0056 Score=48.56 Aligned_cols=216 Identities=10% Similarity=0.109 Sum_probs=104.4
Q ss_pred ceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcC-----CeEEEEEeCCCCCCCCceeeccCCcceEE
Q 021121 37 GRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVAD-----GSVKIYDTALPPTANPIRSLHEHTREVHS 111 (317)
Q Consensus 37 g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~i~v~~~~~~~~~~~~~~~~~~~~~v~~ 111 (317)
..+..||..... ...+........-.+++.. ++ .+++.|+.+ ..+.+||..+. ....+..+.........
T Consensus 30 ~~~~~~d~~~~~--W~~~~~~p~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~~d~~~~-~W~~~~~~p~~r~~~~~ 104 (302)
T 2xn4_A 30 RSVECYDFKEER--WHQVAELPSRRCRAGMVYM-AG-LVFAVGGFNGSLRVRTVDSYDPVKD-QWTSVANMRDRRSTLGA 104 (302)
T ss_dssp CCEEEEETTTTE--EEEECCCSSCCBSCEEEEE-TT-EEEEESCBCSSSBCCCEEEEETTTT-EEEEECCCSSCCBSCEE
T ss_pred CcEEEEcCcCCc--EeEcccCCcccccceEEEE-CC-EEEEEeCcCCCccccceEEECCCCC-ceeeCCCCCccccceEE
Confidence 468888887653 3333222222111222222 33 577777654 35778887653 22222222211112222
Q ss_pred EEEecCCCCEEEEEcCC-----CEEEEEEcCCCceeEE--eeccccceEEEEEecCCCCeEEEEeCC-------CeEEEE
Q 021121 112 ADYNPTRRDSFITSSWD-----DTVKLWTVDRPTSVRT--FKEHAYCVYNATWNPRHSDVFCSASGD-------CTLRIW 177 (317)
Q Consensus 112 ~~~~~~~~~~l~~~~~d-----g~v~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~l~~~~~d-------g~i~i~ 177 (317)
+.+ ++. +++.|+.+ ..+.+||+.+.+-... +.........+.+ + +.+++.|+.+ ..+.+|
T Consensus 105 ~~~--~~~-iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~-~~iyv~GG~~~~~~~~~~~~~~y 178 (302)
T 2xn4_A 105 AVL--NGL-LYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--G-GLLYAVGGYDVASRQCLSTVECY 178 (302)
T ss_dssp EEE--TTE-EEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--T-TEEEEECCEETTTTEECCCEEEE
T ss_pred EEE--CCE-EEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--C-CEEEEEeCCCCCCCccccEEEEE
Confidence 222 344 66666654 3578888877643221 1111111122222 2 6677776542 358899
Q ss_pred eCCCCCce--eeeccCccceEEEEecCCCCcEEEEEecC-----CcEEEEEccCCCccEEEEecCCC--ceeEEEecCCC
Q 021121 178 DVREMGST--MIIPAHEFEILACDWNKYDDCLIASASVD-----KSIKIWDVRNYRVPIAVLNGHGY--AVRKVKFSPHR 248 (317)
Q Consensus 178 d~~~~~~~--~~~~~~~~~v~~i~~~~~~~~~l~~~~~d-----~~i~v~d~~~~~~~~~~~~~~~~--~v~~~~~~~~~ 248 (317)
|+.+.+=. ..+....... +++.. ++.+++.|+.+ ..+.+||..+.+ -..+..... .-..++.. ++
T Consensus 179 d~~~~~W~~~~~~p~~r~~~-~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~r~~~~~~~~-~~ 252 (302)
T 2xn4_A 179 NATTNEWTYIAEMSTRRSGA-GVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNA--WRQVADMNMCRRNAGVCAV-NG 252 (302)
T ss_dssp ETTTTEEEEECCCSSCCBSC-EEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTE--EEEECCCSSCCBSCEEEEE-TT
T ss_pred eCCCCcEEECCCCccccccc-cEEEE--CCEEEEECCCCCCcccceEEEEeCCCCC--EeeCCCCCCccccCeEEEE-CC
Confidence 98765321 1122111111 22222 56788888764 368899987643 222221111 11122222 44
Q ss_pred CeeEEeeecCC-----eEEEEeccccc
Q 021121 249 RNLLASCSYDM-----TVCLWDFMVED 270 (317)
Q Consensus 249 ~~~l~~~~~d~-----~i~vwd~~~~~ 270 (317)
+ +++.|+.++ .+.+||+.+.+
T Consensus 253 ~-i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 253 L-LYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp E-EEEECCBCSSSBCCCEEEEETTTTE
T ss_pred E-EEEECCcCCCcccccEEEEcCCCCe
Confidence 4 677777553 48888887764
No 317
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.70 E-value=0.014 Score=47.54 Aligned_cols=234 Identities=11% Similarity=0.110 Sum_probs=121.0
Q ss_pred cceeEEEEecCCCCe-EEEEEecccccccCceEEEEecCCCCC-cceeee--eecCCCCeeEEEecCC---CCCeEEEEE
Q 021121 8 FNGYSVKFSPFYESR-LAVATAQNFGILGNGRVHVLDLSPAAP-ALTELV--AFDTADGVYDLAWSES---HDSLLIAAV 80 (317)
Q Consensus 8 ~~v~~~~~~p~~~~~-~~~~~~~~~~~~~~g~i~i~~~~~~~~-~~~~~~--~~~~~~~v~~~~~~~~---~~~~l~~~~ 80 (317)
.....|+|.| +++ ++++.. .|+|++++.+.... .+..+. ..........|+++|+ +..+.++-.
T Consensus 18 ~~P~~i~~~p--dG~~l~V~e~-------~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~ 88 (353)
T 2g8s_A 18 DHPWALAFLP--DNHGMLITLR-------GGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYS 88 (353)
T ss_dssp SSEEEEEECS--TTCCEEEEET-------TTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEE
T ss_pred CCcEEEEEcC--CCCEEEEEeC-------CceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEe
Confidence 3567899999 677 776654 78999988432110 011110 0122456789999995 433444433
Q ss_pred c-------CCeEEEEEeCCCCC----CCCc-eeec---cCCcceEEEEEecCCCCEEEEEcC-------------CCEEE
Q 021121 81 A-------DGSVKIYDTALPPT----ANPI-RSLH---EHTREVHSADYNPTRRDSFITSSW-------------DDTVK 132 (317)
Q Consensus 81 ~-------dg~i~v~~~~~~~~----~~~~-~~~~---~~~~~v~~~~~~~~~~~~l~~~~~-------------dg~v~ 132 (317)
. ...|..+++..... .+.+ ..+. .....-..+.|.|+|. ++++.+. .|.|.
T Consensus 89 ~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~-Lyv~~Gd~~~~~~~q~~~~~~g~I~ 167 (353)
T 2g8s_A 89 EVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGY-LFIALGENNQRPTAQDLDKLQGKLV 167 (353)
T ss_dssp EECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSE-EEEEECCTTCGGGGGCTTSCTTEEE
T ss_pred CCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCc-EEEEECCCCCCCccCCCCCCCeEEE
Confidence 2 23566666653210 0111 1111 1111235699999996 5554432 25777
Q ss_pred EEEcCCCc------------eeEEeeccccceEEEEEecCCCCeEEEEeC-CCeEEEEeCCCCC----------------
Q 021121 133 LWTVDRPT------------SVRTFKEHAYCVYNATWNPRHSDVFCSASG-DCTLRIWDVREMG---------------- 183 (317)
Q Consensus 133 iwd~~~~~------------~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-dg~i~i~d~~~~~---------------- 183 (317)
-++.+..- ....+...-.....++|.|..+.++++-.. ++.=.|.-+..+.
T Consensus 168 ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~ 247 (353)
T 2g8s_A 168 RLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGF 247 (353)
T ss_dssp EEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSS
T ss_pred EECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCC
Confidence 77765320 112222122347899999953555544221 1111222121111
Q ss_pred ---------------ceeeeccCccceEEEEecC------CCCcEEEEEecCCcEEEEEccCCCccEEE--E-ecCCCce
Q 021121 184 ---------------STMIIPAHEFEILACDWNK------YDDCLIASASVDKSIKIWDVRNYRVPIAV--L-NGHGYAV 239 (317)
Q Consensus 184 ---------------~~~~~~~~~~~v~~i~~~~------~~~~~l~~~~~d~~i~v~d~~~~~~~~~~--~-~~~~~~v 239 (317)
+...+. +......+.+.+ ..+.++++....+.|...++...+ .... + ......+
T Consensus 248 ~~~~~~~~~~~~~~~P~~~~~-~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~rp 325 (353)
T 2g8s_A 248 KIPEAKGEIVAGTEQPVFYWK-DSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDK-VTEDGRILTDRGQRI 325 (353)
T ss_dssp CCTTCCBSSCTTSCCCSEEES-SCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTE-EEEEEEESGGGCCCE
T ss_pred ccCcccCCCCCCccCCeEEeC-CCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCe-EeeeEEcccCCCCce
Confidence 111111 122456677753 246777777777888888887542 1221 2 2223478
Q ss_pred eEEEecCCCCeeEEe
Q 021121 240 RKVKFSPHRRNLLAS 254 (317)
Q Consensus 240 ~~~~~~~~~~~~l~~ 254 (317)
..+++.|+|. ++++
T Consensus 326 ~~v~~~pdG~-lyv~ 339 (353)
T 2g8s_A 326 RDVRTGPDGY-LYVL 339 (353)
T ss_dssp EEEEECTTSC-EEEE
T ss_pred eEEEECCCCc-EEEE
Confidence 8999999998 4443
No 318
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.67 E-value=0.0082 Score=47.95 Aligned_cols=181 Identities=7% Similarity=0.070 Sum_probs=88.2
Q ss_pred eEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcC-----C------CEEEEEEcCCCceeE
Q 021121 75 LLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSW-----D------DTVKLWTVDRPTSVR 143 (317)
Q Consensus 75 ~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-----d------g~v~iwd~~~~~~~~ 143 (317)
+++.|+ ..+..||..+. .... ..+..............++. +++.|+. . ..+.+||+.+.+-..
T Consensus 7 l~~~GG--~~~~~yd~~~~-~W~~-~~~~~p~~r~~~~~~~~~~~-iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~ 81 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAAN-ECYC-ASLSSQVPKNHVSLVTKENQ-VFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLG 81 (315)
T ss_dssp EEEEET--TEEEEEETTTT-EEEE-EECCCCSCSSEEEEECTTCC-EEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEE
T ss_pred EEEEcC--CceEEECCCCC-eEec-CCCCCCCCccceEEEEECCE-EEEEcCcccCCCCCccccccceEEecCCCCeEEE
Confidence 455554 56888998764 2221 22221112222222333455 6777763 1 237788887764221
Q ss_pred --EeeccccceEEEEEecCCCCeEEEEeCC--------CeEEEEeCCCCCc--eeeeccCccceEEEEecCCCCcEEEEE
Q 021121 144 --TFKEHAYCVYNATWNPRHSDVFCSASGD--------CTLRIWDVREMGS--TMIIPAHEFEILACDWNKYDDCLIASA 211 (317)
Q Consensus 144 --~~~~~~~~v~~~~~~~~~~~~l~~~~~d--------g~i~i~d~~~~~~--~~~~~~~~~~v~~i~~~~~~~~~l~~~ 211 (317)
.+.........+.+ + +.+++.|+.+ ..+.+||+.+.+= +..++..... .+++.. ++++++.|
T Consensus 82 ~~~~p~~r~~~~~~~~--~-~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~--~~~iyv~G 155 (315)
T 4asc_A 82 MPPLPSPRCLFGLGEA--L-NSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYG-HTVLSH--MDLVYVIG 155 (315)
T ss_dssp CCCBSSCEESCEEEEE--T-TEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBS-CEEEEE--TTEEEEEC
T ss_pred CCCCCcchhceeEEEE--C-CEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccc-eeEEEE--CCEEEEEe
Confidence 11111111122222 2 6677777632 4588999876531 1112211111 122222 66788888
Q ss_pred ec-C-----CcEEEEEccCCCccEEEEecCC--CceeEEEecCCCCeeEEeeecCC-----eEEEEeccccc
Q 021121 212 SV-D-----KSIKIWDVRNYRVPIAVLNGHG--YAVRKVKFSPHRRNLLASCSYDM-----TVCLWDFMVED 270 (317)
Q Consensus 212 ~~-d-----~~i~v~d~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~l~~~~~d~-----~i~vwd~~~~~ 270 (317)
+. + ..+.+||..+.+ -..+.... ..-.+++.. +++ +++.|+.++ .+.+||+.+.+
T Consensus 156 G~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~-~~~-iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 156 GKGSDRKCLNKMCVYDPKKFE--WKELAPMQTARSLFGATVH-DGR-IIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp CBCTTSCBCCCEEEEETTTTE--EEECCCCSSCCBSCEEEEE-TTE-EEEEEEECSSSEEEEEEEEETTTTE
T ss_pred CCCCCCcccceEEEEeCCCCe--EEECCCCCCchhceEEEEE-CCE-EEEEeccCCCCccceEEEEECCCCe
Confidence 76 2 368899987643 22222111 111122222 444 777777654 58888887764
No 319
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.62 E-value=0.015 Score=47.94 Aligned_cols=141 Identities=13% Similarity=0.056 Sum_probs=91.0
Q ss_pred CCeEEEEeCCCeEEEEeCCCCCceeeeccC----ccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCc----------
Q 021121 162 SDVFCSASGDCTLRIWDVREMGSTMIIPAH----EFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRV---------- 227 (317)
Q Consensus 162 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~----~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~---------- 227 (317)
+.-++.+ .++.||..++......+.+... -..+..+..+| +|++||..+ +..|.|..+..+..
T Consensus 32 ~t~i~~a-~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSp-sG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~ 108 (452)
T 3pbp_A 32 GTRIVFI-QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISST-SGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDA 108 (452)
T ss_dssp TTEEEEE-ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECT-TSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHT
T ss_pred CCEEEEE-ECCEEEEEECCCCCcceEEecCcccccCceeEEEECC-CCCEEEEec-CCeEEEEEecCccccCcccccccc
Confidence 4444333 3477888887755445454432 22578899999 999999886 56799998873221
Q ss_pred -cEEEEec------CCCceeEEEecCCCCe--eEEeeecCCeEEEEeccccc-ceeeeee---------cccceeEeEEE
Q 021121 228 -PIAVLNG------HGYAVRKVKFSPHRRN--LLASCSYDMTVCLWDFMVED-ALVGRYD---------HHTEFAVGVDM 288 (317)
Q Consensus 228 -~~~~~~~------~~~~v~~~~~~~~~~~--~l~~~~~d~~i~vwd~~~~~-~~~~~~~---------~~~~~v~~~~~ 288 (317)
....+.- ...+|..+.|+|-+.+ .|++-..|+.|++||+.... .+. .+. .....|.+++|
T Consensus 109 ~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~F 187 (452)
T 3pbp_A 109 FQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEF 187 (452)
T ss_dssp TEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEE
T ss_pred cceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEE
Confidence 1112221 2467999999996543 58888889999999998632 111 111 12256889999
Q ss_pred EeccCCeEEE--eecCCcEEE
Q 021121 289 SVLVEGLLAS--TGWDELVYV 307 (317)
Q Consensus 289 ~~~~~~~l~s--~~~dg~i~~ 307 (317)
..+ +-.|.. ....|.|+-
T Consensus 188 g~~-~lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 188 SKD-GLTLYCLNTTEGGDIFA 207 (452)
T ss_dssp CTT-SSCEEEEECTTSCEEEE
T ss_pred cCC-CcEEEEEecCCCCCEEE
Confidence 985 555555 447787654
No 320
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.60 E-value=0.02 Score=46.66 Aligned_cols=240 Identities=12% Similarity=0.088 Sum_probs=125.4
Q ss_pred CeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceee----ccCCcceEEEEEecC---CCCEEEEEcC-------
Q 021121 62 GVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSL----HEHTREVHSADYNPT---RRDSFITSSW------- 127 (317)
Q Consensus 62 ~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~----~~~~~~v~~~~~~~~---~~~~l~~~~~------- 127 (317)
....|+|.|++ ..|+++...|.|++++.... ....+..+ .........++++|+ +..+.++-..
T Consensus 19 ~P~~i~~~pdG-~~l~V~e~~G~i~~~~~~g~-~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 19 HPWALAFLPDN-HGMLITLRGGELRHWQAGKG-LSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SEEEEEECSTT-CCEEEEETTTEEEEEETTTE-ECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CcEEEEEcCCC-CEEEEEeCCceEEEEeCCCc-eeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 46889999998 42556667899999884321 11111111 122345689999996 4424443322
Q ss_pred CCEEEEEEcCCCc----eeEE-eec------cccceEEEEEecCCCCeEEEEeC-------------CCeEEEEeCCCCC
Q 021121 128 DDTVKLWTVDRPT----SVRT-FKE------HAYCVYNATWNPRHSDVFCSASG-------------DCTLRIWDVREMG 183 (317)
Q Consensus 128 dg~v~iwd~~~~~----~~~~-~~~------~~~~v~~~~~~~~~~~~l~~~~~-------------dg~i~i~d~~~~~ 183 (317)
...|..+++.... .... +.. .......++|.|+ +.+.++.+. .|.|.-+|....-
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pd-G~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~ 175 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGK-GYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEI 175 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSS-SEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCC
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCC-CcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCC
Confidence 2367777765431 1111 111 1122467999998 666655433 2567777765320
Q ss_pred ------------ceeee-ccCccceEEEEecCCCCcEEEEEec-CC--cEEEEEcc--------C---------------
Q 021121 184 ------------STMII-PAHEFEILACDWNKYDDCLIASASV-DK--SIKIWDVR--------N--------------- 224 (317)
Q Consensus 184 ------------~~~~~-~~~~~~v~~i~~~~~~~~~l~~~~~-d~--~i~v~d~~--------~--------------- 224 (317)
....+ .++. ....++|+|.++.++++-.. ++ .|.+.... .
T Consensus 176 p~~npf~~~~~~~~~i~a~G~r-np~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~ 254 (353)
T 2g8s_A 176 PDDNPFIKESGVRAEIWSYGIR-NPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKG 254 (353)
T ss_dssp CTTCTTTTSTTSCTTEEEECCS-EEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCB
T ss_pred CCCCCCcCCCCCCccEEEEcCc-CccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccC
Confidence 11111 2333 35789999844555544221 11 22221100 0
Q ss_pred -----CCccEEEEecCCCceeEEEecC-------CCCeeEEeeecCCeEEEEecccccceeee---eecccceeEeEEEE
Q 021121 225 -----YRVPIAVLNGHGYAVRKVKFSP-------HRRNLLASCSYDMTVCLWDFMVEDALVGR---YDHHTEFAVGVDMS 289 (317)
Q Consensus 225 -----~~~~~~~~~~~~~~v~~~~~~~-------~~~~~l~~~~~d~~i~vwd~~~~~~~~~~---~~~~~~~v~~~~~~ 289 (317)
...++..+..| .....+.|.. ++. ++++.-..+.|...++..++ .... +......+..+++.
T Consensus 255 ~~~~~~~~P~~~~~~~-~ap~G~~~y~g~~fp~~~g~-l~v~~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~rp~~v~~~ 331 (353)
T 2g8s_A 255 EIVAGTEQPVFYWKDS-PAVSGMAFYNSDKFPQWQQK-LFIGALKDKDVIVMSVNGDK-VTEDGRILTDRGQRIRDVRTG 331 (353)
T ss_dssp SSCTTSCCCSEEESSC-CCEEEEEEECCSSSGGGTTE-EEEEETTTTEEEEEEEETTE-EEEEEEESGGGCCCEEEEEEC
T ss_pred CCCCCccCCeEEeCCC-cCcceeEEECCccCcccCCc-EEEEEccCCEEEEEEeCCCe-EeeeEEcccCCCCceeEEEEC
Confidence 01122233323 3567788864 344 66666667788888877543 2211 22223478999999
Q ss_pred eccCCeEEEee-cCCcEEEEecC
Q 021121 290 VLVEGLLASTG-WDELVYVWQQG 311 (317)
Q Consensus 290 ~~~~~~l~s~~-~dg~i~~w~~~ 311 (317)
|+ +.++++.. .+| +||.+.
T Consensus 332 pd-G~lyv~td~~~g--~I~ri~ 351 (353)
T 2g8s_A 332 PD-GYLYVLTDESSG--ELLKVS 351 (353)
T ss_dssp TT-SCEEEEECSTTE--EEEEEE
T ss_pred CC-CcEEEEEeCCCC--EEEEEe
Confidence 98 56555433 455 556654
No 321
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.58 E-value=0.0075 Score=48.02 Aligned_cols=222 Identities=10% Similarity=0.096 Sum_probs=105.9
Q ss_pred CeEEEEEcC----CeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcC----C-----CEEEEEEcCCCc
Q 021121 74 SLLIAAVAD----GSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSW----D-----DTVKLWTVDRPT 140 (317)
Q Consensus 74 ~~l~~~~~d----g~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~----d-----g~v~iwd~~~~~ 140 (317)
.+++.|+.+ ..+.+||..+. ....+..+....... +++.. ++. +++.|+. + ..+.+||+.+.+
T Consensus 26 ~i~v~GG~~~~~~~~~~~~d~~~~-~W~~~~~~p~~r~~~-~~~~~-~~~-lyv~GG~~~~~~~~~~~~~~~~~d~~~~~ 101 (308)
T 1zgk_A 26 LIYTAGGYFRQSLSYLEAYNPSNG-TWLRLADLQVPRSGL-AGCVV-GGL-LYAVGGRNNSPDGNTDSSALDCYNPMTNQ 101 (308)
T ss_dssp CEEEECCBSSSBCCCEEEEETTTT-EEEECCCCSSCCBSC-EEEEE-TTE-EEEECCEEEETTEEEECCCEEEEETTTTE
T ss_pred EEEEEeCcCCCCcceEEEEcCCCC-eEeECCCCCcccccc-eEEEE-CCE-EEEECCCcCCCCCCeecceEEEECCCCCe
Confidence 466666532 35778887653 122221111111111 12222 344 6666665 2 358888987764
Q ss_pred eeE--EeeccccceEEEEEecCCCCeEEEEeCC-----CeEEEEeCCCCCcee--eeccCccceEEEEecCCCCcEEEEE
Q 021121 141 SVR--TFKEHAYCVYNATWNPRHSDVFCSASGD-----CTLRIWDVREMGSTM--IIPAHEFEILACDWNKYDDCLIASA 211 (317)
Q Consensus 141 ~~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~--~~~~~~~~v~~i~~~~~~~~~l~~~ 211 (317)
-.. .+.........+.+ + +.+++.|+.+ ..+.+||+.+.+-.. .+.........+.+ ++.+++.|
T Consensus 102 W~~~~~~p~~r~~~~~~~~--~-~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~G 175 (308)
T 1zgk_A 102 WSPCAPMSVPRNRIGVGVI--D-GHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL---NRLLYAVG 175 (308)
T ss_dssp EEECCCCSSCCBTCEEEEE--T-TEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE---TTEEEEEC
T ss_pred EeECCCCCcCccccEEEEE--C-CEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE---CCEEEEEe
Confidence 221 11111112222222 3 6677776643 358889987653211 11211111122222 56777777
Q ss_pred ecC-----CcEEEEEccCCCccEEEEec---CCCceeEEEecCCCCeeEEeeecC-----CeEEEEecccccce-eeeee
Q 021121 212 SVD-----KSIKIWDVRNYRVPIAVLNG---HGYAVRKVKFSPHRRNLLASCSYD-----MTVCLWDFMVEDAL-VGRYD 277 (317)
Q Consensus 212 ~~d-----~~i~v~d~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~l~~~~~d-----~~i~vwd~~~~~~~-~~~~~ 277 (317)
+.+ ..+.+||..+.+ -..+.. .......+.+ +++ +++.|+.+ ..+.+||+.+.+-. +..+.
T Consensus 176 G~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p 250 (308)
T 1zgk_A 176 GFDGTNRLNSAECYYPERNE--WRMITAMNTIRSGAGVCVL--HNC-IYAAGGYDGQDQLNSVERYDVETETWTFVAPMK 250 (308)
T ss_dssp CBCSSCBCCCEEEEETTTTE--EEECCCCSSCCBSCEEEEE--TTE-EEEECCBCSSSBCCCEEEEETTTTEEEECCCCS
T ss_pred CCCCCCcCceEEEEeCCCCe--EeeCCCCCCccccceEEEE--CCE-EEEEeCCCCCCccceEEEEeCCCCcEEECCCCC
Confidence 754 458899987643 222211 1111122222 444 67777754 45889998876511 11111
Q ss_pred cccceeEeEEEEeccCCeEEEeecC-----CcEEEEecCCC
Q 021121 278 HHTEFAVGVDMSVLVEGLLASTGWD-----ELVYVWQQGMD 313 (317)
Q Consensus 278 ~~~~~v~~~~~~~~~~~~l~s~~~d-----g~i~~w~~~~~ 313 (317)
..... .+++. -+ +.+++.||.+ ..+.+||+..+
T Consensus 251 ~~r~~-~~~~~-~~-~~i~v~GG~~~~~~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 251 HRRSA-LGITV-HQ-GRIYVLGGYDGHTFLDSVECYDPDTD 288 (308)
T ss_dssp SCCBS-CEEEE-ET-TEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred CCccc-eEEEE-EC-CEEEEEcCcCCCcccceEEEEcCCCC
Confidence 11111 12222 23 6777888754 45677877653
No 322
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.55 E-value=0.019 Score=47.31 Aligned_cols=137 Identities=9% Similarity=0.118 Sum_probs=89.8
Q ss_pred CceEEEEecCCCCCcceeeeeec--CCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCC---------ceeecc
Q 021121 36 NGRVHVLDLSPAAPALTELVAFD--TADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANP---------IRSLHE 104 (317)
Q Consensus 36 ~g~i~i~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~---------~~~~~~ 104 (317)
++.||.-++.+.. ..+.+.... .-..|..+..+|+| .+||..+ +..|.|-.+..+..... ...+.-
T Consensus 40 ~n~iR~~~i~~~~-~Yk~L~~~~~i~f~~i~qlvlSpsG-~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l 116 (452)
T 3pbp_A 40 DNIIRWYNVLTDS-LYHSLNFSRHLVLDDTFHVISSTSG-DLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSI 116 (452)
T ss_dssp TTEEEEEETTTCS-SCEEEECTTTCCCCTTCEEEECTTS-SEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEG
T ss_pred CCEEEEEECCCCC-cceEEecCcccccCceeEEEECCCC-CEEEEec-CCeEEEEEecCccccCcccccccccceeEEEc
Confidence 4588888887543 344444321 12368889999998 5777765 56799999874321110 112221
Q ss_pred ------CCcceEEEEEecCCCC--EEEEEcCCCEEEEEEcCCCc--eeEEee---------ccccceEEEEEecCCCCeE
Q 021121 105 ------HTREVHSADYNPTRRD--SFITSSWDDTVKLWTVDRPT--SVRTFK---------EHAYCVYNATWNPRHSDVF 165 (317)
Q Consensus 105 ------~~~~v~~~~~~~~~~~--~l~~~~~dg~v~iwd~~~~~--~~~~~~---------~~~~~v~~~~~~~~~~~~l 165 (317)
...+|..+.|+|-+.+ .|++-..|+.|++||+.... +. .++ .....|.+++|.++ +-.|
T Consensus 117 ~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~-~lTL 194 (452)
T 3pbp_A 117 DEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKD-GLTL 194 (452)
T ss_dssp GGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTT-SSCE
T ss_pred CCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCC-CcEE
Confidence 2578999999997543 79999999999999998631 11 222 12256889999996 6666
Q ss_pred EEEe--CCCeEEEE
Q 021121 166 CSAS--GDCTLRIW 177 (317)
Q Consensus 166 ~~~~--~dg~i~i~ 177 (317)
...+ ++|.|+-.
T Consensus 195 Yvl~~t~~GDIYAl 208 (452)
T 3pbp_A 195 YCLNTTEGGDIFAF 208 (452)
T ss_dssp EEEECTTSCEEEEE
T ss_pred EEEecCCCCCEEEE
Confidence 6644 77887654
No 323
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.53 E-value=0.016 Score=46.24 Aligned_cols=215 Identities=8% Similarity=0.045 Sum_probs=101.3
Q ss_pred ceEEEEecCCCCCcceeeeeecC--CCCeeEEEecCCCCCeEEEEEc-----C------CeEEEEEeCCCCCCCCceeec
Q 021121 37 GRVHVLDLSPAAPALTELVAFDT--ADGVYDLAWSESHDSLLIAAVA-----D------GSVKIYDTALPPTANPIRSLH 103 (317)
Q Consensus 37 g~i~i~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~l~~~~~-----d------g~i~v~~~~~~~~~~~~~~~~ 103 (317)
..+..||.....- .. ..... ...-.+++. .++ .+++.|+. . ..+.+||..+. ....+..+.
T Consensus 13 ~~~~~yd~~~~~W--~~-~~~~~p~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~-~W~~~~~~p 86 (315)
T 4asc_A 13 EGAVAYDPAANEC--YC-ASLSSQVPKNHVSLVT-KEN-QVFVAGGLFYNEDNKEDPMSAYFLQFDHLDS-EWLGMPPLP 86 (315)
T ss_dssp TEEEEEETTTTEE--EE-EECCCCSCSSEEEEEC-TTC-CEEEEEEEEECSSCSSSCEEEEEEEEETTTT-EEEECCCBS
T ss_pred CceEEECCCCCeE--ec-CCCCCCCCccceEEEE-ECC-EEEEEcCcccCCCCCccccccceEEecCCCC-eEEECCCCC
Confidence 3788999877652 22 22211 222222333 344 57777773 1 12667776643 222222221
Q ss_pred cCCcceEEEEEecCCCCEEEEEcCC--------CEEEEEEcCCCceeE--EeeccccceEEEEEecCCCCeEEEEeC-C-
Q 021121 104 EHTREVHSADYNPTRRDSFITSSWD--------DTVKLWTVDRPTSVR--TFKEHAYCVYNATWNPRHSDVFCSASG-D- 171 (317)
Q Consensus 104 ~~~~~v~~~~~~~~~~~~l~~~~~d--------g~v~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~-d- 171 (317)
........+.+ ++. +++.|+.+ ..+.+||+.+.+-.. .+.........+. .+ +.+++.|+. +
T Consensus 87 ~~r~~~~~~~~--~~~-lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~-~~iyv~GG~~~~ 160 (315)
T 4asc_A 87 SPRCLFGLGEA--LNS-IYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS--HM-DLVYVIGGKGSD 160 (315)
T ss_dssp SCEESCEEEEE--TTE-EEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ET-TEEEEECCBCTT
T ss_pred cchhceeEEEE--CCE-EEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE--EC-CEEEEEeCCCCC
Confidence 11111112222 344 66666632 458899988763221 1111111122222 22 667777776 2
Q ss_pred ----CeEEEEeCCCCCc--eeeeccCccceEEEEecCCCCcEEEEEecCC-----cEEEEEccCCCccEEEEecC--CCc
Q 021121 172 ----CTLRIWDVREMGS--TMIIPAHEFEILACDWNKYDDCLIASASVDK-----SIKIWDVRNYRVPIAVLNGH--GYA 238 (317)
Q Consensus 172 ----g~i~i~d~~~~~~--~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~-----~i~v~d~~~~~~~~~~~~~~--~~~ 238 (317)
..+.+||+.+.+= +..+....... +++.. ++++++.|+.++ .+.+||..+.+ -..+... ...
T Consensus 161 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~ 235 (315)
T 4asc_A 161 RKCLNKMCVYDPKKFEWKELAPMQTARSLF-GATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNK--WAPFEAFPQERS 235 (315)
T ss_dssp SCBCCCEEEEETTTTEEEECCCCSSCCBSC-EEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTE--EEEECCCSSCCB
T ss_pred CcccceEEEEeCCCCeEEECCCCCCchhce-EEEEE--CCEEEEEeccCCCCccceEEEEECCCCe--EEECCCCCCccc
Confidence 4688999876531 11121111111 22222 567888887654 48889987653 2222211 111
Q ss_pred eeEEEecCCCCeeEEeeecCC--------------eEEEEeccccc
Q 021121 239 VRKVKFSPHRRNLLASCSYDM--------------TVCLWDFMVED 270 (317)
Q Consensus 239 v~~~~~~~~~~~~l~~~~~d~--------------~i~vwd~~~~~ 270 (317)
-.+++.. +++ +++.|+.++ .+.+||+.+.+
T Consensus 236 ~~~~~~~-~~~-l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 279 (315)
T 4asc_A 236 SLSLVSL-VGT-LYAIGGFATLETESGELVPTELNDIWRYNEEEKK 279 (315)
T ss_dssp SCEEEEE-TTE-EEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTE
T ss_pred ceeEEEE-CCE-EEEECCccccCcCCccccccccCcEEEecCCCCh
Confidence 1122222 444 677777532 36677877654
No 324
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.50 E-value=0.012 Score=46.75 Aligned_cols=216 Identities=11% Similarity=0.094 Sum_probs=103.5
Q ss_pred ceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEc----C-----CeEEEEEeCCCCCCCCceeeccCCc
Q 021121 37 GRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVA----D-----GSVKIYDTALPPTANPIRSLHEHTR 107 (317)
Q Consensus 37 g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~----d-----g~i~v~~~~~~~~~~~~~~~~~~~~ 107 (317)
..+.+||..... ...+........-.+++.. ++ .+++.|+. + ..+.+||..+. ....+..+.....
T Consensus 39 ~~~~~~d~~~~~--W~~~~~~p~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~~~~~~d~~~~-~W~~~~~~p~~r~ 113 (308)
T 1zgk_A 39 SYLEAYNPSNGT--WLRLADLQVPRSGLAGCVV-GG-LLYAVGGRNNSPDGNTDSSALDCYNPMTN-QWSPCAPMSVPRN 113 (308)
T ss_dssp CCEEEEETTTTE--EEECCCCSSCCBSCEEEEE-TT-EEEEECCEEEETTEEEECCCEEEEETTTT-EEEECCCCSSCCB
T ss_pred ceEEEEcCCCCe--EeECCCCCcccccceEEEE-CC-EEEEECCCcCCCCCCeecceEEEECCCCC-eEeECCCCCcCcc
Confidence 468888877653 2222222222111222222 33 56666665 2 35778887653 2222222221112
Q ss_pred ceEEEEEecCCCCEEEEEcCC-----CEEEEEEcCCCceeE--EeeccccceEEEEEecCCCCeEEEEeCC-----CeEE
Q 021121 108 EVHSADYNPTRRDSFITSSWD-----DTVKLWTVDRPTSVR--TFKEHAYCVYNATWNPRHSDVFCSASGD-----CTLR 175 (317)
Q Consensus 108 ~v~~~~~~~~~~~~l~~~~~d-----g~v~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~i~ 175 (317)
....+.+ ++. +++.|+.+ ..+.+||+.+.+-.. .+.........+.+ + +.+++.|+.+ ..+.
T Consensus 114 ~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~-~~iyv~GG~~~~~~~~~~~ 187 (308)
T 1zgk_A 114 RIGVGVI--DGH-IYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--N-RLLYAVGGFDGTNRLNSAE 187 (308)
T ss_dssp TCEEEEE--TTE-EEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--T-TEEEEECCBCSSCBCCCEE
T ss_pred ccEEEEE--CCE-EEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--C-CEEEEEeCCCCCCcCceEE
Confidence 2222222 444 66666543 358889987763221 11111111222222 3 6777777654 4588
Q ss_pred EEeCCCCCce--eeeccCccceEEEEecCCCCcEEEEEecC-----CcEEEEEccCCCccEEEEecCC--CceeEEEecC
Q 021121 176 IWDVREMGST--MIIPAHEFEILACDWNKYDDCLIASASVD-----KSIKIWDVRNYRVPIAVLNGHG--YAVRKVKFSP 246 (317)
Q Consensus 176 i~d~~~~~~~--~~~~~~~~~v~~i~~~~~~~~~l~~~~~d-----~~i~v~d~~~~~~~~~~~~~~~--~~v~~~~~~~ 246 (317)
+||+.+.+=. ..+.........+.+ ++.+++.|+.+ ..+.+||+.+.+ -..+.... ..-.+++..
T Consensus 188 ~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~- 261 (308)
T 1zgk_A 188 CYYPERNEWRMITAMNTIRSGAGVCVL---HNCIYAAGGYDGQDQLNSVERYDVETET--WTFVAPMKHRRSALGITVH- 261 (308)
T ss_dssp EEETTTTEEEECCCCSSCCBSCEEEEE---TTEEEEECCBCSSSBCCCEEEEETTTTE--EEECCCCSSCCBSCEEEEE-
T ss_pred EEeCCCCeEeeCCCCCCccccceEEEE---CCEEEEEeCCCCCCccceEEEEeCCCCc--EEECCCCCCCccceEEEEE-
Confidence 9998765321 111111111222222 56788888765 468999987643 22221111 111122222
Q ss_pred CCCeeEEeeecC-----CeEEEEeccccc
Q 021121 247 HRRNLLASCSYD-----MTVCLWDFMVED 270 (317)
Q Consensus 247 ~~~~~l~~~~~d-----~~i~vwd~~~~~ 270 (317)
+++ +++.|+.+ ..+.+||+.+.+
T Consensus 262 ~~~-i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 262 QGR-IYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp TTE-EEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCE-EEEEcCcCCCcccceEEEEcCCCCE
Confidence 444 67777644 357788877654
No 325
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.50 E-value=0.027 Score=45.52 Aligned_cols=236 Identities=13% Similarity=0.136 Sum_probs=124.7
Q ss_pred cceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeee-----cCCCCeeEEEecCC---CCCeEEEE
Q 021121 8 FNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAF-----DTADGVYDLAWSES---HDSLLIAA 79 (317)
Q Consensus 8 ~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~---~~~~l~~~ 79 (317)
.....|+|.| ++.++++... .|+|++++..... ...+... ........|+++|+ + ..|.+.
T Consensus 32 ~~P~~ia~~p--dG~llVter~------~G~I~~v~~~~g~--~~~v~~~~~v~~~g~~GllGia~~Pdf~~~-g~lYv~ 100 (347)
T 3das_A 32 NSPWGLAPLP--GGDLLVSSRD------EATITRVDAKTGR--KTELGEVPGVSPSGEGGLLGIALSPDYASD-HMVYAY 100 (347)
T ss_dssp SSEEEEEECT--TSCEEEEETT------TCEEEEECTTTCC--EEEEEECTTCCCBTTBSEEEEEECTTHHHH-CEEEEE
T ss_pred CCceEEEEcC--CCcEEEEEec------CCEEEEEECCCCc--EeeecccCceeecCCCCceeeEeccccccC-CEEEEE
Confidence 4567899999 6788887754 7899988754332 2222211 23557899999995 3 244433
Q ss_pred -E--cCCeEEEEEeCCCC----CC-CCce---eec-cCCcceEEEEEecCCCCEEEEEcC-------------CCEEEEE
Q 021121 80 -V--ADGSVKIYDTALPP----TA-NPIR---SLH-EHTREVHSADYNPTRRDSFITSSW-------------DDTVKLW 134 (317)
Q Consensus 80 -~--~dg~i~v~~~~~~~----~~-~~~~---~~~-~~~~~v~~~~~~~~~~~~l~~~~~-------------dg~v~iw 134 (317)
+ .++.|.-|.+.... .. .... .+. .....-..|.|.|+|. ++++.+. .|.|.-.
T Consensus 101 yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~-Lyvt~Gd~~~~~~~qd~~~~~G~IlRi 179 (347)
T 3das_A 101 FTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKM-LYAGTGESGDTGLSQDRKSLGGKILRM 179 (347)
T ss_dssp EECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSC-EEEECBCTTCGGGTTCTTCSTTCEEEE
T ss_pred EecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCC-EEEEECCCCCCccccCCCCCCCEEEEE
Confidence 2 34556666655421 11 1111 121 1112345689999997 5555432 3566656
Q ss_pred EcCCCc-------eeEEee-ccccceEEEEEecCCCCeEEEE-eCCCeEEEEeCCCCC------------------ceee
Q 021121 135 TVDRPT-------SVRTFK-EHAYCVYNATWNPRHSDVFCSA-SGDCTLRIWDVREMG------------------STMI 187 (317)
Q Consensus 135 d~~~~~-------~~~~~~-~~~~~v~~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~------------------~~~~ 187 (317)
+.+..- ....+. ++ .....++|+|+ +.+.++- +.++.=.|--++.+. ++..
T Consensus 180 ~~dG~ip~~nPf~~~~i~a~G~-RNp~Gla~dp~-G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~ 257 (347)
T 3das_A 180 TPDGEPAPGNPFPGSPVYSYGH-RNVQGLAWDDK-QRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQ 257 (347)
T ss_dssp CTTSSBCTTCSSTTCCEEEBCC-SBCCEEEECTT-CCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEE
T ss_pred eCCCCccCCCCCCCCeEEeeCC-CCcceEEECCC-CCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEe
Confidence 654320 011222 33 34678999997 6666543 223322222222221 1112
Q ss_pred eccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCC---ccEEEEecCCCceeEEEecCCCCeeEEeeecCC
Q 021121 188 IPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYR---VPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDM 259 (317)
Q Consensus 188 ~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~ 259 (317)
+..+......++|. ++.++...-..+.|....+.... .....+.+....+..++..|+|.-++++...||
T Consensus 258 ~~~~~~ap~G~~~~--~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td~~~g 330 (347)
T 3das_A 258 WSTDEASPSGIAYA--EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTSNTDG 330 (347)
T ss_dssp ECTTTCCEEEEEEE--TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEECTTSS
T ss_pred cCCCCCCCcceEEE--cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEcCCCC
Confidence 22121244566665 46667666666777777776532 112333444467888999999873333333343
No 326
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.49 E-value=0.025 Score=44.90 Aligned_cols=237 Identities=15% Similarity=0.170 Sum_probs=146.3
Q ss_pred EEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeC
Q 021121 12 SVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTA 91 (317)
Q Consensus 12 ~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~ 91 (317)
+.-.+|. ..+++--. ...++|+|++... .+..+...+.|.-=+|-.+ ..|+..+ +..|.-|++.
T Consensus 71 sAIMnP~--~~ViALra-------g~~LQiFnletK~----klks~~~~e~VvfWkWis~--~~L~lVT-~taVyHWs~~ 134 (365)
T 2xzh_A 71 SAIMNPA--SKVIALKA-------GKTLQIFNIEMKS----KMKAHTMTDDVTFWKWISL--NTVALVT-DNAVYHWSME 134 (365)
T ss_dssp EEEECSS--SSEEEEEE-------TTEEEEEETTTTE----EEEEEECSSCEEEEEECSS--SEEEEEE-SSEEEEEESS
T ss_pred eeeeCCC--ccEEEEec-------CCeEEEechHHhh----hhcceecCCccEEEEecCC--CeEEEEc-CCcEEEEccc
Confidence 4556883 44444333 4589999998764 4555566778888888865 3666665 4579999997
Q ss_pred CCCCCCCceeeccC----CcceEEEEEecCCCCEEEEEc------CCCEEEEEEcCCCceeEEeeccccceEEEEEecC-
Q 021121 92 LPPTANPIRSLHEH----TREVHSADYNPTRRDSFITSS------WDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPR- 160 (317)
Q Consensus 92 ~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~l~~~~------~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~- 160 (317)
. ...+.+.+..| ...|..-..+++.+-++++|- -.|.+.+|..+. +..+.+.+|......+....+
T Consensus 135 ~--~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-~~sQ~ieGhaa~F~~~~~~g~~ 211 (365)
T 2xzh_A 135 G--ESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAASFAQFKMEGNA 211 (365)
T ss_dssp T--TCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTT-TEEEEECCSEEEEEEECCTTCS
T ss_pred C--CCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecc-cccceeeeeeeeeEEEecCCCC
Confidence 5 33555555544 345666666777774555542 237888999874 455667777765544443221
Q ss_pred -CCCeEEEEeC---CCeEEEEeCCCC---Ccee-----e--ec--cCccceEEEEecCCCCcEEEEEecCCcEEEEEccC
Q 021121 161 -HSDVFCSASG---DCTLRIWDVREM---GSTM-----I--IP--AHEFEILACDWNKYDDCLIASASVDKSIKIWDVRN 224 (317)
Q Consensus 161 -~~~~l~~~~~---dg~i~i~d~~~~---~~~~-----~--~~--~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~ 224 (317)
...+++.+.. .+++++.++... .+.. . ++ ....-..++..++ .-..+..-+.-|.|++||+.+
T Consensus 212 ~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~-kygviyviTK~G~ihlyDleT 290 (365)
T 2xzh_A 212 EESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISE-KHDVVFLITKYGYIHLYDLET 290 (365)
T ss_dssp SCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEET-TTTEEEEEETTSEEEEEETTT
T ss_pred CCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecc-cCCEEEEEeCCcEEEEEEccc
Confidence 1224444333 268999998543 1111 0 11 1123345788887 667788888999999999999
Q ss_pred CCccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEeccccc
Q 021121 225 YRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVED 270 (317)
Q Consensus 225 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~ 270 (317)
+.. +...+-....|..-+.+..... +++....|.|.--.+....
T Consensus 291 gt~-i~~nrIS~d~iF~ta~~~~~~G-i~~Vnr~GqVl~v~v~~~~ 334 (365)
T 2xzh_A 291 GTC-IYMNRISGETIFVTAPHEATAG-IIGVNRKGQVLSVCVEEEN 334 (365)
T ss_dssp CCE-EEEEECCSSCEEEEEEEGGGTE-EEEEETTCEEEEEEECTTT
T ss_pred CcE-EEEeccCCCceEEecccCCCCc-EEEEcCCCEEEEEEECccc
Confidence 875 5555555556655555444343 5555577777666655543
No 327
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.46 E-value=0.026 Score=45.11 Aligned_cols=181 Identities=9% Similarity=0.079 Sum_probs=84.4
Q ss_pred eEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcC----CC-------EEEEEEcCCCceeE
Q 021121 75 LLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSW----DD-------TVKLWTVDRPTSVR 143 (317)
Q Consensus 75 ~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~----dg-------~v~iwd~~~~~~~~ 143 (317)
+++.|+. .+..||..+. .... .................++. +++.|+. ++ .+.+||..+.+-..
T Consensus 18 i~~~GG~--~~~~yd~~~~-~W~~-~~~~~~~~r~~~~~~~~~~~-lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~ 92 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMEN-ECYL-TALAEQIPRNHSSIVTQQNQ-VYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVG 92 (318)
T ss_dssp EEEECSS--EEEEEETTTT-EEEE-EEECTTSCSSEEEEECSSSC-EEEEESSCC-------CCCBEEEEEETTTTEEEE
T ss_pred hhhcccc--ceEEECCCCC-ceec-ccCCccCCccceEEEEECCE-EEEECCcccCccccCCCccccEEEEeCCCCcEEE
Confidence 4444443 3778887654 1111 11111111112222233444 7777773 12 27788887654321
Q ss_pred --EeeccccceEEEEEecCCCCeEEEEeCC-------CeEEEEeCCCCCcee--eeccCccceEEEEecCCCCcEEEEEe
Q 021121 144 --TFKEHAYCVYNATWNPRHSDVFCSASGD-------CTLRIWDVREMGSTM--IIPAHEFEILACDWNKYDDCLIASAS 212 (317)
Q Consensus 144 --~~~~~~~~v~~~~~~~~~~~~l~~~~~d-------g~i~i~d~~~~~~~~--~~~~~~~~v~~i~~~~~~~~~l~~~~ 212 (317)
.+...........+ + +.+++.|+.+ ..+.+||+.+.+=.. .++..... .+++. . ++.+++.|+
T Consensus 93 ~~~~p~~r~~~~~~~~--~-~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~-~-~~~iyv~GG 166 (318)
T 2woz_A 93 LPPLPSARCLFGLGEV--D-DKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYG-HNVIS-H-NGMIYCLGG 166 (318)
T ss_dssp CSCBSSCBCSCEEEEE--T-TEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEES-CEEEE-E-TTEEEEECC
T ss_pred CCCCCccccccceEEE--C-CEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccc-cEEEE-E-CCEEEEEcC
Confidence 11111111122222 3 6777777754 357888987653211 11111111 12222 2 677777776
Q ss_pred cC------CcEEEEEccCCCccEEEEecCC--CceeEEEecCCCCeeEEeeecC-----CeEEEEeccccc
Q 021121 213 VD------KSIKIWDVRNYRVPIAVLNGHG--YAVRKVKFSPHRRNLLASCSYD-----MTVCLWDFMVED 270 (317)
Q Consensus 213 ~d------~~i~v~d~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~l~~~~~d-----~~i~vwd~~~~~ 270 (317)
.+ ..+.+||..+.+ -..+.... ..-.+++.. +++ +++.|+.+ ..+.+||+.+.+
T Consensus 167 ~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~-~~~-iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 167 KTDDKKCTNRVFIYNPKKGD--WKDLAPMKTPRSMFGVAIH-KGK-IVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp EESSSCBCCCEEEEETTTTE--EEEECCCSSCCBSCEEEEE-TTE-EEEEEEEETTEEEEEEEEEETTTCC
T ss_pred CCCCCCccceEEEEcCCCCE--EEECCCCCCCcccceEEEE-CCE-EEEEcCcCCCCccceEEEEECCCCe
Confidence 42 358999988753 22222111 111122222 444 66777643 347788887765
No 328
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.44 E-value=0.037 Score=45.78 Aligned_cols=236 Identities=15% Similarity=0.171 Sum_probs=148.2
Q ss_pred EEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeC
Q 021121 12 SVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTA 91 (317)
Q Consensus 12 ~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~ 91 (317)
+.-.+|. ..+++--. ...+.|||++... .+..+...+.|.-=.|-.+ +.|+..+ +..|.-|++.
T Consensus 70 sAIMnP~--~~iiALra-------g~~lQiFnle~K~----klks~~~~e~VvfWkWis~--~~l~lVT-~taVyHWsi~ 133 (494)
T 1bpo_A 70 SAIMNPA--SKVIALKA-------GKTLQIFNIEMKS----KMKAHTMTDDVTFWKWISL--NTVALVT-DNAVYHWSME 133 (494)
T ss_dssp EEEECSS--SSCEEEEE-------TTEEEEEETTTTE----EEEEEECSSCCCEEEEEET--TEEEEEC-SSEEEEEESS
T ss_pred eeeeCCC--CcEEEEec-------CCeEEEEchHHhh----hhcceecCCCceEEEecCC--CeEEEEc-CCeeEEeccc
Confidence 5567784 34444333 4599999998764 4555566777888888765 3566654 4579999987
Q ss_pred CCCCCCCceeeccC----CcceEEEEEecCCCCEEEEEc------CCCEEEEEEcCCCceeEEeeccccceEEEEEecC-
Q 021121 92 LPPTANPIRSLHEH----TREVHSADYNPTRRDSFITSS------WDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPR- 160 (317)
Q Consensus 92 ~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~l~~~~------~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~- 160 (317)
. ...+.+.+..| ...|..-..+++.+-++++|- -.|.+.+|..+.+ ..+.+.+|......+....+
T Consensus 134 ~--~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~ 210 (494)
T 1bpo_A 134 G--ESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNA 210 (494)
T ss_dssp S--SCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECCSEEEEEEEECTTCS
T ss_pred C--CCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchheeeeeeeEEEecCCCC
Confidence 5 33555555544 345666667888774555542 2478899998754 45667778776655544321
Q ss_pred -CCCeEEEEeC---CCeEEEEeCCCC---Ccee---e----ec--cCccceEEEEecCCCCcEEEEEecCCcEEEEEccC
Q 021121 161 -HSDVFCSASG---DCTLRIWDVREM---GSTM---I----IP--AHEFEILACDWNKYDDCLIASASVDKSIKIWDVRN 224 (317)
Q Consensus 161 -~~~~l~~~~~---dg~i~i~d~~~~---~~~~---~----~~--~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~ 224 (317)
...+++.+.. .+++++.++... .+.. . ++ ....-..++..++ .-..+..-+.-|.|++||+.+
T Consensus 211 ~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~-kygviyviTK~G~i~lyDleT 289 (494)
T 1bpo_A 211 EESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISE-KHDVVFLITKYGYIHLYDLET 289 (494)
T ss_dssp SEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEET-TTTEEEEEETTSEEEEEETTT
T ss_pred CCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecc-cCCEEEEEecCceEEEEeccc
Confidence 1124444444 378999998543 1111 0 11 1123356788888 677888888999999999999
Q ss_pred CCccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccc
Q 021121 225 YRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVE 269 (317)
Q Consensus 225 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~ 269 (317)
+.. +..-+-....|..-+.+..... +++....|.|.--.+...
T Consensus 290 gt~-i~~nrIs~~~iF~t~~~~~~~G-i~~Vnr~GqVl~v~v~e~ 332 (494)
T 1bpo_A 290 GTC-IYMNRISGETIFVTAPHEATAG-IIGVNRKGQVLSVCVEEE 332 (494)
T ss_dssp CCE-EEEEECCSSCEEEEEEETTTTE-EEEEETTCEEEEEEECTT
T ss_pred cee-eeeecccCCceEEecccCCCCc-EEEEccCceEEEEEEccc
Confidence 875 5555555566666665555443 555567887766665544
No 329
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=97.36 E-value=0.046 Score=45.19 Aligned_cols=270 Identities=12% Similarity=0.012 Sum_probs=129.4
Q ss_pred CcceeEEEEecCCCCeEEEEEecccccccCc--eEEEEecCCCCCcceeeee---ec---------CCCCeeEEEecCCC
Q 021121 7 PFNGYSVKFSPFYESRLAVATAQNFGILGNG--RVHVLDLSPAAPALTELVA---FD---------TADGVYDLAWSESH 72 (317)
Q Consensus 7 ~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g--~i~i~~~~~~~~~~~~~~~---~~---------~~~~v~~~~~~~~~ 72 (317)
...|.+|.+.|..++.+.+++. .| .-.||...........+.. +. ....|.++++.|.+
T Consensus 54 ~~~v~~i~~dp~~~~~l~~g~~-------~g~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~ 126 (394)
T 3b7f_A 54 GHTIHHIVQDPREPERMLMAAR-------TGHLGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHAS 126 (394)
T ss_dssp TSEEEEEEECSSSTTCEEEEEE-------C--CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTT
T ss_pred CCceEEEEECCCCCCeEEEEec-------CCCCCccEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCC
Confidence 3568899999855666666665 22 1123333333322332221 11 11257789998742
Q ss_pred -CCeEEEEEcCCeEEEEEeCCCCCCCCceeec----------------cCCcceEEEEEecCCCCEEEEEcCCCEEEEEE
Q 021121 73 -DSLLIAAVADGSVKIYDTALPPTANPIRSLH----------------EHTREVHSADYNPTRRDSFITSSWDDTVKLWT 135 (317)
Q Consensus 73 -~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~----------------~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd 135 (317)
+..+.++...+.|...+ +.++..+.+.... .....+.+|.+.|.....++.+..++.|...+
T Consensus 127 ~~~~l~~g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~ 205 (394)
T 3b7f_A 127 EPGTWYAGTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFEST 205 (394)
T ss_dssp STTCEEEEEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEES
T ss_pred CCCEEEEEecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEEC
Confidence 34566666666544332 1222222221111 11245788999885433455555455554432
Q ss_pred cCCCceeEEeecc-------------ccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeecc--Cc---cceEE
Q 021121 136 VDRPTSVRTFKEH-------------AYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPA--HE---FEILA 197 (317)
Q Consensus 136 ~~~~~~~~~~~~~-------------~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~---~~v~~ 197 (317)
+.++.-..+... ...+.++.+.|.++..+..+...+ |...+- .++.-..+.. .. ..+.+
T Consensus 206 -DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s~D-~G~tW~~~~~~l~~~~~~~~~~ 282 (394)
T 3b7f_A 206 -DAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRMDR-REGVWKRIGDAMPREVGDIGFP 282 (394)
T ss_dssp -STTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEEET-TTTEEECGGGGSCTTTCSCEEE
T ss_pred -CCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEeCC-CCCcceECCCCCCCCCccceEE
Confidence 223332222110 134889999987567777777655 444432 2222222211 11 23567
Q ss_pred EEecCCCCcEEEEEec-----------CCcEEEEEccCCCccEEEEe-cCCC-------ceeEEEecCCCCeeEEeeecC
Q 021121 198 CDWNKYDDCLIASASV-----------DKSIKIWDVRNYRVPIAVLN-GHGY-------AVRKVKFSPHRRNLLASCSYD 258 (317)
Q Consensus 198 i~~~~~~~~~l~~~~~-----------d~~i~v~d~~~~~~~~~~~~-~~~~-------~v~~~~~~~~~~~~l~~~~~d 258 (317)
+.++|.+...+.++.. ++...+|...........+. +-.. ....++++|.....|+.++.+
T Consensus 283 i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~glp~~~~~~~~~~~~~~~~p~~~~~l~~g~~~ 362 (394)
T 3b7f_A 283 IVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRGLPTDQAWLTVKRQAMTADAHAPVGVYFGTTG 362 (394)
T ss_dssp EEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBTSCCSSCCCCCCTBSEEECCSSSCCEEEECTT
T ss_pred EEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCCCCCccccceEEEEEEEECCCCCCEEEEEeCC
Confidence 8888744444554432 33355666555322233322 1110 113588888643345566655
Q ss_pred CeEEEEecccccceeeeeecccceeEeEEEE
Q 021121 259 MTVCLWDFMVEDALVGRYDHHTEFAVGVDMS 289 (317)
Q Consensus 259 ~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~ 289 (317)
+.|..- .........+..+-..+.+++|.
T Consensus 363 g~l~~S--~D~G~tW~~~~~~lp~~~~v~~~ 391 (394)
T 3b7f_A 363 GEIWAS--ADEGEHWQCIASHLPHIYAVQSA 391 (394)
T ss_dssp SCEEEE--SSTTSBCEEEECSCSCEEEEEEE
T ss_pred CeEEEE--CCCCCCceEcccCCCCeeEEEEe
Confidence 554432 22222223333333446666664
No 330
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.30 E-value=0.043 Score=43.57 Aligned_cols=258 Identities=10% Similarity=0.118 Sum_probs=154.1
Q ss_pred CceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEe
Q 021121 36 NGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYN 115 (317)
Q Consensus 36 ~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 115 (317)
...|.|.|+....... ...... -+.-.+|.. +.+|.-. ...++++|++.. ..+....- .+.|.-=.|-
T Consensus 48 ~~~VvIiDl~n~~~~~--Rrpi~A----dsAIMnP~~-~ViALra-g~~LQiFnletK---~klks~~~-~e~VvfWkWi 115 (365)
T 2xzh_A 48 QAQVVIIDMNDPSNPI--RRPISA----DSAIMNPAS-KVIALKA-GKTLQIFNIEMK---SKMKAHTM-TDDVTFWKWI 115 (365)
T ss_dssp EEEEEEEETTSTTSCE--EEECCC----SEEEECSSS-SEEEEEE-TTEEEEEETTTT---EEEEEEEC-SSCEEEEEEC
T ss_pred CCEEEEEECCCCCCcc--cccccc----ceeeeCCCc-cEEEEec-CCeEEEechHHh---hhhcceec-CCccEEEEec
Confidence 3479999998766321 111122 234458875 5777665 688999999875 44444433 4567666776
Q ss_pred cCCCCEEEEEcCCCEEEEEEcCCC-ceeEEeecc----ccceEEEEEecCCCCeEEEEe------CCCeEEEEeCCCCCc
Q 021121 116 PTRRDSFITSSWDDTVKLWTVDRP-TSVRTFKEH----AYCVYNATWNPRHSDVFCSAS------GDCTLRIWDVREMGS 184 (317)
Q Consensus 116 ~~~~~~l~~~~~dg~v~iwd~~~~-~~~~~~~~~----~~~v~~~~~~~~~~~~l~~~~------~dg~i~i~d~~~~~~ 184 (317)
.+. .|+-.+ +..|+-|+++.. .+.+.+..| ...|..-..+++..-++++|- -.|.+.+|..+. +.
T Consensus 116 s~~--~L~lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-~~ 191 (365)
T 2xzh_A 116 SLN--TVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KV 191 (365)
T ss_dssp SSS--EEEEEE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTT-TE
T ss_pred CCC--eEEEEc-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecc-cc
Confidence 544 455544 458999999753 555556544 346777777887333333332 247789999864 44
Q ss_pred eeeeccCccceEEEEecC--CCCcEEEEEec---CCcEEEEEccCC---Ccc-----EEEEec---CCCceeEEEecCCC
Q 021121 185 TMIIPAHEFEILACDWNK--YDDCLIASASV---DKSIKIWDVRNY---RVP-----IAVLNG---HGYAVRKVKFSPHR 248 (317)
Q Consensus 185 ~~~~~~~~~~v~~i~~~~--~~~~~l~~~~~---d~~i~v~d~~~~---~~~-----~~~~~~---~~~~v~~~~~~~~~ 248 (317)
.+.+.+|......+.... ...++++.+.. .+.+++.++... ..+ +..+.. ...-.-++..++..
T Consensus 192 sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~ky 271 (365)
T 2xzh_A 192 SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKH 271 (365)
T ss_dssp EEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTT
T ss_pred cceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccC
Confidence 566777776555444332 11234444433 258999998543 111 111111 12334478888877
Q ss_pred CeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEeecCCcEEEEecCC
Q 021121 249 RNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGM 312 (317)
Q Consensus 249 ~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~ 312 (317)
. +++.-..-|.|++||++++..+ ...+-....|..-+-... ..=++.....|.|.--.++.
T Consensus 272 g-viyviTK~G~ihlyDleTgt~i-~~nrIS~d~iF~ta~~~~-~~Gi~~Vnr~GqVl~v~v~~ 332 (365)
T 2xzh_A 272 D-VVFLITKYGYIHLYDLETGTCI-YMNRISGETIFVTAPHEA-TAGIIGVNRKGQVLSVCVEE 332 (365)
T ss_dssp T-EEEEEETTSEEEEEETTTCCEE-EEEECCSSCEEEEEEEGG-GTEEEEEETTCEEEEEEECT
T ss_pred C-EEEEEeCCcEEEEEEcccCcEE-EEeccCCCceEEecccCC-CCcEEEEcCCCEEEEEEECc
Confidence 7 7888889999999999999744 444444555654454444 33455555788776655554
No 331
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.29 E-value=0.056 Score=44.72 Aligned_cols=257 Identities=10% Similarity=0.118 Sum_probs=154.8
Q ss_pred CceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEe
Q 021121 36 NGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYN 115 (317)
Q Consensus 36 ~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 115 (317)
...|.|.|+.......+ .... --+.-.+|.. +.+|.-. ..+++|+|++.. ..+....- ...|.-=.|-
T Consensus 47 ~~~vvIiDl~~~~~~~r--rpi~----AdsAIMnP~~-~iiALra-g~~lQiFnle~K---~klks~~~-~e~VvfWkWi 114 (494)
T 1bpo_A 47 QAQVVIIDMNDPSNPIR--RPIS----ADSAIMNPAS-KVIALKA-GKTLQIFNIEMK---SKMKAHTM-TDDVTFWKWI 114 (494)
T ss_dssp CCEEEEEETTSTTSCEE--EECC----CSEEEECSSS-SCEEEEE-TTEEEEEETTTT---EEEEEEEC-SSCCCEEEEE
T ss_pred CCeEEEEECCCCCccee--cccc----cceeeeCCCC-cEEEEec-CCeEEEEchHHh---hhhcceec-CCCceEEEec
Confidence 44789999987653211 1111 2244578876 5776665 789999999865 44444443 3456555665
Q ss_pred cCCCCEEEEEcCCCEEEEEEcCCC-ceeEEeecc----ccceEEEEEecCCCCeEE-EEe------CCCeEEEEeCCCCC
Q 021121 116 PTRRDSFITSSWDDTVKLWTVDRP-TSVRTFKEH----AYCVYNATWNPRHSDVFC-SAS------GDCTLRIWDVREMG 183 (317)
Q Consensus 116 ~~~~~~l~~~~~dg~v~iwd~~~~-~~~~~~~~~----~~~v~~~~~~~~~~~~l~-~~~------~dg~i~i~d~~~~~ 183 (317)
.+. .|+-.+ +..|+-|+++.. .+.+.+..| ...|..-..+++ .+.++ +|- -.|.+.+|..+. +
T Consensus 115 s~~--~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~-~kW~~l~GI~~~~~~v~G~mQLYS~er-~ 189 (494)
T 1bpo_A 115 SLN--TVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAK-QKWLLLTGISAQQNRVVGAMQLYSVDR-K 189 (494)
T ss_dssp ETT--EEEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTT-SSEEEEEEEEEETTEEEEEEEEEESTT-C
T ss_pred CCC--eEEEEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECCC-CCeEEEEeecccCCcccceEEEeeccc-c
Confidence 443 455555 468999999753 455566544 346777777887 44444 332 247889999875 4
Q ss_pred ceeeeccCccceEEEEecCC--CCcEEEEEecC---CcEEEEEccCC---CccE--EEE---e---cCCCceeEEEecCC
Q 021121 184 STMIIPAHEFEILACDWNKY--DDCLIASASVD---KSIKIWDVRNY---RVPI--AVL---N---GHGYAVRKVKFSPH 247 (317)
Q Consensus 184 ~~~~~~~~~~~v~~i~~~~~--~~~~l~~~~~d---~~i~v~d~~~~---~~~~--~~~---~---~~~~~v~~~~~~~~ 247 (317)
..+.+.+|......+..... ...+++.+... +.+++.++... ..+. ... - ....-.-++..++.
T Consensus 190 ~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~k 269 (494)
T 1bpo_A 190 VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEK 269 (494)
T ss_dssp CEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETT
T ss_pred ccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEeccc
Confidence 45667777766655554321 12344444432 78999998543 1111 111 1 11233457888888
Q ss_pred CCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEeecCCcEEEEecCC
Q 021121 248 RRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGM 312 (317)
Q Consensus 248 ~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~ 312 (317)
.. +++.-..-|.|++||+.++..+ ..-+-....|..-+-... ..=++.....|.|.--.++.
T Consensus 270 yg-viyviTK~G~i~lyDleTgt~i-~~nrIs~~~iF~t~~~~~-~~Gi~~Vnr~GqVl~v~v~e 331 (494)
T 1bpo_A 270 HD-VVFLITKYGYIHLYDLETGTCI-YMNRISGETIFVTAPHEA-TAGIIGVNRKGQVLSVCVEE 331 (494)
T ss_dssp TT-EEEEEETTSEEEEEETTTCCEE-EEEECCSSCEEEEEEETT-TTEEEEEETTCEEEEEEECT
T ss_pred CC-EEEEEecCceEEEEecccceee-eeecccCCceEEecccCC-CCcEEEEccCceEEEEEEcc
Confidence 77 7888889999999999999744 344444555555444444 33455555777776555544
No 332
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.25 E-value=0.034 Score=41.39 Aligned_cols=177 Identities=8% Similarity=-0.089 Sum_probs=95.5
Q ss_pred EEEEEcCCCEEEEEEcCCCc------eeEEeec-cccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeeccCcc
Q 021121 121 SFITSSWDDTVKLWTVDRPT------SVRTFKE-HAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEF 193 (317)
Q Consensus 121 ~l~~~~~dg~v~iwd~~~~~------~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 193 (317)
+|++...| +++.=.+.++. ....+.. .=..+..++|+|+ +.+.++ .+|.++-.+..+.....-+. ...
T Consensus 6 ~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~-G~LYaV--~~G~Ly~~~~~t~~~~~W~~-s~t 80 (236)
T 1tl2_A 6 MLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPG-GELYGV--LNDKIYKGTPPTHDNDNWMG-RAK 80 (236)
T ss_dssp CEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTT-SCEEEE--ETTEEEEESCCCSTTCCHHH-HCE
T ss_pred EEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCC-ccEEEE--eCCeEEEECCCCCCcccccc-ccc
Confidence 66777777 66554444433 1122221 1236789999996 776666 77887777765432211111 122
Q ss_pred c--------eEEEEecCCCCcEEEEEecCCcEEEEEccCCCcc------EEEEecCCCceeEEEecCCCCeeEEeeecCC
Q 021121 194 E--------ILACDWNKYDDCLIASASVDKSIKIWDVRNYRVP------IAVLNGHGYAVRKVKFSPHRRNLLASCSYDM 259 (317)
Q Consensus 194 ~--------v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~------~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~ 259 (317)
. ..++.|.| ++.+.++ .||.|+-++-.+.... ...-..-=..+..|.+.|+|. |.+.. |+
T Consensus 81 ~IG~~Gw~~F~a~~fD~-~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~--Lyav~-dg 154 (236)
T 1tl2_A 81 KIGNGGWNQFQFLFFDP-NGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGY--LYAVH-GQ 154 (236)
T ss_dssp EEECSCGGGCSEEEECT-TSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSC--EEEEE-TT
T ss_pred EecccccccceEEEECC-CCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCce--EEEEe-CC
Confidence 2 47889999 8988887 5698988876432211 111111124678999999996 55555 88
Q ss_pred eEEEEeccccc-----ceeeeee-cccceeEeEEEEeccCCeEEEeecCCcEEEEecCCC
Q 021121 260 TVCLWDFMVED-----ALVGRYD-HHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGMD 313 (317)
Q Consensus 260 ~i~vwd~~~~~-----~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~ 313 (317)
.+.-....+.. .....+. ..-..-+-+.|.++ +.+.+.. +| ++|....+
T Consensus 155 ~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~-G~l~~v~--~g--~~Y~~~~p 209 (236)
T 1tl2_A 155 QFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSV-GTLFGVQ--GG--KFYEDYPP 209 (236)
T ss_dssp EEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTT-SCEEEEE--TT--EEEEESCC
T ss_pred cEEecCCCCCCCcccccccceeccCCcceEEEEEECCC-CcEEEEe--CC--eEEecCCc
Confidence 75433322111 0011111 11223344667775 4444444 77 55655443
No 333
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.23 E-value=0.054 Score=43.20 Aligned_cols=214 Identities=7% Similarity=0.065 Sum_probs=98.6
Q ss_pred eEEEEecCCCCCcceeeeeec--CCCCeeEEEecCCCCCeEEEEEc----CC-------eEEEEEeCCCCCCCCceeecc
Q 021121 38 RVHVLDLSPAAPALTELVAFD--TADGVYDLAWSESHDSLLIAAVA----DG-------SVKIYDTALPPTANPIRSLHE 104 (317)
Q Consensus 38 ~i~i~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~----dg-------~i~v~~~~~~~~~~~~~~~~~ 104 (317)
.+..||...... ... ... ....-.+++ ..++ .+++.|+. ++ .+.+||..+. ....+..+..
T Consensus 25 ~~~~yd~~~~~W--~~~-~~~~~~~r~~~~~~-~~~~-~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~-~W~~~~~~p~ 98 (318)
T 2woz_A 25 AAVAYDPMENEC--YLT-ALAEQIPRNHSSIV-TQQN-QVYVVGGLYVDEENKDQPLQSYFFQLDNVSS-EWVGLPPLPS 98 (318)
T ss_dssp EEEEEETTTTEE--EEE-EECTTSCSSEEEEE-CSSS-CEEEEESSCC-------CCCBEEEEEETTTT-EEEECSCBSS
T ss_pred ceEEECCCCCce--ecc-cCCccCCccceEEE-EECC-EEEEECCcccCccccCCCccccEEEEeCCCC-cEEECCCCCc
Confidence 578888876652 221 111 122222333 2334 57777763 12 1666776543 2222222221
Q ss_pred CCcceEEEEEecCCCCEEEEEcCC-------CEEEEEEcCCCceeEE--eeccccceEEEEEecCCCCeEEEEeC-----
Q 021121 105 HTREVHSADYNPTRRDSFITSSWD-------DTVKLWTVDRPTSVRT--FKEHAYCVYNATWNPRHSDVFCSASG----- 170 (317)
Q Consensus 105 ~~~~v~~~~~~~~~~~~l~~~~~d-------g~v~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~l~~~~~----- 170 (317)
.......+.+ ++. +++.|+.+ ..+.+||+.+.+-... +.........+. .+ +.+++.|+.
T Consensus 99 ~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~-~~iyv~GG~~~~~~ 172 (318)
T 2woz_A 99 ARCLFGLGEV--DDK-IYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS--HN-GMIYCLGGKTDDKK 172 (318)
T ss_dssp CBCSCEEEEE--TTE-EEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE--ET-TEEEEECCEESSSC
T ss_pred cccccceEEE--CCE-EEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE--EC-CEEEEEcCCCCCCC
Confidence 1111122222 344 66666643 3588888877643221 111111111222 23 667777764
Q ss_pred -CCeEEEEeCCCCCce--eeeccCccceEEEEecCCCCcEEEEEecC-----CcEEEEEccCCCccEEEEecCCC--cee
Q 021121 171 -DCTLRIWDVREMGST--MIIPAHEFEILACDWNKYDDCLIASASVD-----KSIKIWDVRNYRVPIAVLNGHGY--AVR 240 (317)
Q Consensus 171 -dg~i~i~d~~~~~~~--~~~~~~~~~v~~i~~~~~~~~~l~~~~~d-----~~i~v~d~~~~~~~~~~~~~~~~--~v~ 240 (317)
-..+.+||+.+.+=. ..+...... .+++.. ++.+++.|+.+ ..+.+||+.+.+ -..+..... .-.
T Consensus 173 ~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~ 247 (318)
T 2woz_A 173 CTNRVFIYNPKKGDWKDLAPMKTPRSM-FGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNK--WEVMTEFPQERSSI 247 (318)
T ss_dssp BCCCEEEEETTTTEEEEECCCSSCCBS-CEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCC--EEECCCCSSCCBSC
T ss_pred ccceEEEEcCCCCEEEECCCCCCCccc-ceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCe--EEECCCCCCcccce
Confidence 235899998875321 111111111 122222 56777777654 347788887654 222221111 111
Q ss_pred EEEecCCCCeeEEeeecC--------------CeEEEEeccccc
Q 021121 241 KVKFSPHRRNLLASCSYD--------------MTVCLWDFMVED 270 (317)
Q Consensus 241 ~~~~~~~~~~~l~~~~~d--------------~~i~vwd~~~~~ 270 (317)
+++.. +++ +++.|+.+ ..+.+||+.+.+
T Consensus 248 ~~~~~-~~~-i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 289 (318)
T 2woz_A 248 SLVSL-AGS-LYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKE 289 (318)
T ss_dssp EEEEE-TTE-EEEECCBCCBC----CCBCCBCCCEEEEETTTTE
T ss_pred EEEEE-CCE-EEEECCeeccCCCCceeccceeeeEEEEeCCCCE
Confidence 22222 344 67777654 347778877654
No 334
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.21 E-value=0.12 Score=46.82 Aligned_cols=228 Identities=8% Similarity=-0.001 Sum_probs=126.7
Q ss_pred CCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceee-ccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCC
Q 021121 60 ADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSL-HEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDR 138 (317)
Q Consensus 60 ~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~ 138 (317)
...|.+|.-..+| .|-.|+.+| +..||-... +..... ......|.++....++ .|..|+.+| +..||..+
T Consensus 21 ~n~V~~I~qD~~G--~lWigT~~G-L~ryDG~~~---~~~~~~~~~~~~~i~~i~~d~~g--~lWigT~~G-l~~yd~~~ 91 (758)
T 3ott_A 21 ASVVSCFLQDSEG--LIWIGSNKG-LFSYDGYST---QQHFTYGENNNTRIYCGVIIDNT--YLYMGTDNG-ILVYNYRA 91 (758)
T ss_dssp CCCEEEEEECTTS--CEEEEESSC-EEEECSSCE---EECSCTTSTTSSCEEEEEEETTT--EEEEEETTE-EEEEETTT
T ss_pred cceEEEEEECCCC--CEEEEECCC-ccccCCCce---EEEEccCCCCCceEEEEEEcCCC--cEEEEeCCC-eEEEeCCC
Confidence 4578999888776 677788888 666663211 100000 1123568888777665 466666555 78899877
Q ss_pred CceeEEeeccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeec-----cCccceEEEEecCCCCcEEEEEec
Q 021121 139 PTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIP-----AHEFEILACDWNKYDDCLIASASV 213 (317)
Q Consensus 139 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-----~~~~~v~~i~~~~~~~~~l~~~~~ 213 (317)
.+...........|.++.. .+ + .+..++.+ .|..+|..+.+.. .+. .....|.++...+ ++.+.+ ++.
T Consensus 92 ~~f~~~~~~~~~~i~~i~~-~~-g-~lWigt~~-Gl~~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~-~g~lWi-gt~ 164 (758)
T 3ott_A 92 DRYEQPETDFPTDVRTMAL-QG-D-TLWLGALN-GLYTYQLQSRKLT-SFDTRRNGLPNNTIYSIIRTK-DNQIYV-GTY 164 (758)
T ss_dssp TEECCCSCCCCSCEEEEEE-ET-T-EEEEEETT-EEEEEETTTCCEE-EECHHHHCCSCSCEEEEEECT-TCCEEE-EET
T ss_pred CEEECcccCCCceEEEEEe-cC-C-cEEEEcCC-cceeEeCCCCeEE-EeccCCCCcCCCeEEEEEEcC-CCCEEE-EeC
Confidence 5432211112234666654 23 4 45556665 5888998765432 221 1234578888776 666554 444
Q ss_pred CCcEEEEEccCCCccEEEEec------CCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEE
Q 021121 214 DKSIKIWDVRNYRVPIAVLNG------HGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVD 287 (317)
Q Consensus 214 d~~i~v~d~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~ 287 (317)
+ -+..||..+.+ ...+.. ....|.++...+++.. |..|.. +-+..+|..+.+ ...........|.++.
T Consensus 165 ~-Gl~~~~~~~~~--~~~~~~~~~~~~~~~~i~~i~~d~~~~~-lWigt~-~Gl~~~~~~~~~-~~~~~~l~~~~i~~i~ 238 (758)
T 3ott_A 165 N-GLCRYIPSNGK--FEGIPLPVHSSQSNLFVNSLLEDTTRQC-VWIGTE-GYLFQYFPSTGQ-IKQTEAFHNNSIKSLA 238 (758)
T ss_dssp T-EEEEEETTTTE--EEEECCCCCTTCSSCCEEEEEEETTTTE-EEEEEE-EEEEEEETTTTE-EEEEEEEEEEEEEEEE
T ss_pred C-CHhhCccCCCc--eEEecCCCccccccceeEEEEEECCCCE-EEEEEC-CCCeEEcCCCCe-EEeccCCCCCeEEEEE
Confidence 4 47788876543 222211 1224788888776663 444554 457788876654 2111111234577776
Q ss_pred EEeccCCeEEEeecCCcEEEEecCC
Q 021121 288 MSVLVEGLLASTGWDELVYVWQQGM 312 (317)
Q Consensus 288 ~~~~~~~~l~s~~~dg~i~~w~~~~ 312 (317)
...+ + .|..|+.+| +.+++...
T Consensus 239 ~d~~-g-~lWigT~~G-l~~~~~~~ 260 (758)
T 3ott_A 239 LDGN-G-DLLAGTDNG-LYVYHNDT 260 (758)
T ss_dssp ECTT-C-CEEEEETTE-EEEECCTT
T ss_pred EcCC-C-CEEEEeCCc-eeEEecCC
Confidence 6654 3 444455444 66776543
No 335
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.10 E-value=0.051 Score=40.50 Aligned_cols=147 Identities=7% Similarity=-0.055 Sum_probs=81.3
Q ss_pred cceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCcee------EEee-ccccceEEEEEecCCCCeEEEEeCCCeEEEEeC
Q 021121 107 REVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSV------RTFK-EHAYCVYNATWNPRHSDVFCSASGDCTLRIWDV 179 (317)
Q Consensus 107 ~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~------~~~~-~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~ 179 (317)
..+..++|+|++. +.++ .+|.+.-.+..+.+.. ..+- .--....++.|.|+ +.+.++ .||.|+-++.
T Consensus 41 ~~~~~laf~P~G~-LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~-G~LYav--~dG~iyr~~p 114 (236)
T 1tl2_A 41 SNFKFLFLSPGGE-LYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPN-GYLYAV--SKDKLYKASP 114 (236)
T ss_dssp TTCSEEEECTTSC-EEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTT-SCEEEE--ETTEEEEESC
T ss_pred ccceeEEECCCcc-EEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCC-CCEEEe--CCCEEEEeCC
Confidence 3677999999886 4444 6788777776542221 1111 01112478899998 776666 5699988876
Q ss_pred CCCCcee------ee-ccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCc-----cEEEEe-cCCCceeEEEecC
Q 021121 180 REMGSTM------II-PAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRV-----PIAVLN-GHGYAVRKVKFSP 246 (317)
Q Consensus 180 ~~~~~~~------~~-~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~-----~~~~~~-~~~~~v~~~~~~~ 246 (317)
.+..... .+ ..-=..+..+.+.| ++.+.++. |+.++-........ ....+. ..-..-+-+.|.|
T Consensus 115 P~~~~~~Wl~~a~~vg~~gw~~~~~lff~p-~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~ 191 (236)
T 1tl2_A 115 PQSDTDNWIARATEVGSGGWSGFKFLFFHP-NGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSS 191 (236)
T ss_dssp CCSTTCCHHHHSEEEECSSGGGEEEEEECT-TSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECT
T ss_pred CcCCCCceeccccEeccCCCCceEEEEECC-CceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECC
Confidence 4322111 11 11114578999999 99888776 77654332221110 011111 2222345577888
Q ss_pred CCCeeEEeeecCCeEEEEecc
Q 021121 247 HRRNLLASCSYDMTVCLWDFM 267 (317)
Q Consensus 247 ~~~~~l~~~~~d~~i~vwd~~ 267 (317)
++. +.+ .. ++ ++|...
T Consensus 192 ~G~-l~~-v~-~g--~~Y~~~ 207 (236)
T 1tl2_A 192 VGT-LFG-VQ-GG--KFYEDY 207 (236)
T ss_dssp TSC-EEE-EE-TT--EEEEES
T ss_pred CCc-EEE-Ee-CC--eEEecC
Confidence 886 343 33 66 444433
No 336
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.07 E-value=0.11 Score=43.87 Aligned_cols=107 Identities=8% Similarity=0.213 Sum_probs=59.0
Q ss_pred cceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeec-------CCCCeeEEEecCC---CCCeEE
Q 021121 8 FNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFD-------TADGVYDLAWSES---HDSLLI 77 (317)
Q Consensus 8 ~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~-------~~~~v~~~~~~~~---~~~~l~ 77 (317)
....+|+|.| +++++++... .++|++++..... ...+..+. .......|+|+|+ +..+.+
T Consensus 27 ~~P~~~a~~p--dG~l~V~e~~------gg~I~~~~~~~g~--~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv 96 (454)
T 1cru_A 27 NKPHALLWGP--DNQIWLTERA------TGKILRVNPESGS--VKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYI 96 (454)
T ss_dssp SSEEEEEECT--TSCEEEEETT------TCEEEEECTTTCC--EEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEE
T ss_pred CCceEEEEcC--CCcEEEEEcC------CCEEEEEECCCCc--EeEEecCCccccccCCCCceeEEEECCCcCcCCEEEE
Confidence 4567899999 6888887652 3478888754332 22222221 2456789999995 433444
Q ss_pred EEEc------------CCeEEEEEeCCCCC----CCCce-eec-cCCcceEEEEEecCCCCEEEEE
Q 021121 78 AAVA------------DGSVKIYDTALPPT----ANPIR-SLH-EHTREVHSADYNPTRRDSFITS 125 (317)
Q Consensus 78 ~~~~------------dg~i~v~~~~~~~~----~~~~~-~~~-~~~~~v~~~~~~~~~~~~l~~~ 125 (317)
+-+. ...|.-+++..... .+.+. .+. ........|+|.|+|. ++++.
T Consensus 97 ~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~-Lyv~~ 161 (454)
T 1cru_A 97 SGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQK-IYYTI 161 (454)
T ss_dssp EEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSC-EEEEE
T ss_pred EEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCe-EEEEE
Confidence 3332 23455555543210 01111 111 1123468899999998 55543
No 337
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.05 E-value=0.038 Score=44.92 Aligned_cols=92 Identities=8% Similarity=0.038 Sum_probs=42.7
Q ss_pred CeEEEEEc-CCeEEEEEeCC-CCCCCCceeec-cCCcceEEEEEecCCCCEEEEEcC-C---------CEEEEEEcCCCc
Q 021121 74 SLLIAAVA-DGSVKIYDTAL-PPTANPIRSLH-EHTREVHSADYNPTRRDSFITSSW-D---------DTVKLWTVDRPT 140 (317)
Q Consensus 74 ~~l~~~~~-dg~i~v~~~~~-~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~-d---------g~v~iwd~~~~~ 140 (317)
.+++.|+. ...+.+||... ......+..+. ........+.+ ++. +++.|+. + ..+.+||+.+.+
T Consensus 21 ~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~-lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~ 97 (357)
T 2uvk_A 21 TVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGN-LYVFGGIGKNSEGLTQVFNDVHKYNPKTNS 97 (357)
T ss_dssp EEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTE-EEEECCEEECTTSCEEECCCEEEEETTTTE
T ss_pred EEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCE-EEEEcCCCCCCCccceeeccEEEEeCCCCc
Confidence 45555554 34677888753 12233232222 11111222222 344 6666665 2 468899988764
Q ss_pred eeE--Eee-ccccceEEEEEecCCCCeEEEEeCC
Q 021121 141 SVR--TFK-EHAYCVYNATWNPRHSDVFCSASGD 171 (317)
Q Consensus 141 ~~~--~~~-~~~~~v~~~~~~~~~~~~l~~~~~d 171 (317)
-.. .+. .......++. .+ +.+++.|+.+
T Consensus 98 W~~~~~~~p~~r~~~~~~~--~~-~~iyv~GG~~ 128 (357)
T 2uvk_A 98 WVKLMSHAPMGMAGHVTFV--HN-GKAYVTGGVN 128 (357)
T ss_dssp EEECSCCCSSCCSSEEEEE--ET-TEEEEEECCC
T ss_pred EEECCCCCCcccccceEEE--EC-CEEEEEeCcC
Confidence 221 111 1111122222 33 6777788754
No 338
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.98 E-value=0.16 Score=48.64 Aligned_cols=234 Identities=14% Similarity=0.171 Sum_probs=133.1
Q ss_pred EEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeC
Q 021121 12 SVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTA 91 (317)
Q Consensus 12 ~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~ 91 (317)
+.-.+| ...+++--. ...+.|||+.... .+..+..+++|.-=.|-.+. .|+..+ +..|.-|++.
T Consensus 70 sAIMnP--~~~iiALra-------g~~lQiFnl~~k~----klks~~~~e~VvfWkWis~~--~l~lVT-~~aVyHW~~~ 133 (1630)
T 1xi4_A 70 SAIMNP--ASKVIALKA-------GKTLQIFNIEMKS----KMKAHTMTDDVTFWKWISLN--TVALVT-DNAVYHWSME 133 (1630)
T ss_pred hhccCC--CcceEEEec-------CCeEEEeehHHhh----hhcccccCCCceEEEecCCC--eeEEEc-CCeEEEeccC
Confidence 344677 334444333 4589999998765 34444556678777887553 555554 4569999996
Q ss_pred CCCCCCCceeeccC----CcceEEEEEecCCCCEEEEEc------CCCEEEEEEcCCCceeEEeeccccceEEEEEe--c
Q 021121 92 LPPTANPIRSLHEH----TREVHSADYNPTRRDSFITSS------WDDTVKLWTVDRPTSVRTFKEHAYCVYNATWN--P 159 (317)
Q Consensus 92 ~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~l~~~~------~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~--~ 159 (317)
. ...+...+..| ...|..-..+++.+-++++|- -.|.+.+|..+.+ ..+.+.+|.+....+... +
T Consensus 134 ~--~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~-~sQ~iegha~~F~~~~~~~~~ 210 (1630)
T 1xi4_A 134 G--ESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNA 210 (1630)
T ss_pred C--CCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc-cchhhhHhHhhhheeccCCCC
Confidence 4 33455545444 345666667788775555552 3588899988754 334455665544444332 2
Q ss_pred CCCCeEEEEeC---CCeEEEEeCCCC---Cceee-------ecc--CccceEEEEecCCCCcEEEEEecCCcEEEEEccC
Q 021121 160 RHSDVFCSASG---DCTLRIWDVREM---GSTMI-------IPA--HEFEILACDWNKYDDCLIASASVDKSIKIWDVRN 224 (317)
Q Consensus 160 ~~~~~l~~~~~---dg~i~i~d~~~~---~~~~~-------~~~--~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~ 224 (317)
....+++.+.. .+++++.++... .+... ++. ...-..++..++ .-..+..-+.-|.|++||+.+
T Consensus 211 ~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~-k~g~iy~itk~G~~~~~d~~t 289 (1630)
T 1xi4_A 211 EESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISE-KHDVVFLITKYGYIHLYDLET 289 (1630)
T ss_pred CCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEecc-ccCEEEEEecCceEEEEeccc
Confidence 21233333322 378999988543 11111 111 122245777887 666777888899999999999
Q ss_pred CCccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecc
Q 021121 225 YRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFM 267 (317)
Q Consensus 225 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~ 267 (317)
+.. +..-+-...+|...+-+..... +++....|.|.--.+.
T Consensus 290 ~~~-i~~~ris~~~iF~~~~~~~~~g-~~~vnr~G~vl~v~v~ 330 (1630)
T 1xi4_A 290 GTC-IYMNRISGETIFVTAPHEATAG-IIGVNRKGQVLSVCVE 330 (1630)
T ss_pred chh-hhhccccCCceEEeccCCCCCc-eEEEcCCceEEEEEEc
Confidence 774 4333333444444444433222 3334455655444443
No 339
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.71 E-value=0.12 Score=41.44 Aligned_cols=191 Identities=9% Similarity=-0.016 Sum_probs=97.7
Q ss_pred CeEEEEEcCCeEEEEEeCCCCCCCCceeeccC-CcceEEEEE--ecCCCCEEEEE-cCCCEEEEEEcCCCceeEEeecc-
Q 021121 74 SLLIAAVADGSVKIYDTALPPTANPIRSLHEH-TREVHSADY--NPTRRDSFITS-SWDDTVKLWTVDRPTSVRTFKEH- 148 (317)
Q Consensus 74 ~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~-~~~v~~~~~--~~~~~~~l~~~-~~dg~v~iwd~~~~~~~~~~~~~- 148 (317)
.++++++.||.|.-+|.+++ +....++.. ..++....- .+.+...++.. ..||.|..++.++|.....+...
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG---~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~ 87 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNG---HIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQ 87 (339)
T ss_dssp EEEEEEETTSCEEEEETTTT---EEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHH
T ss_pred CEEEEEeCCCeEEEEECCCC---cEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccc
Confidence 37888899999999988766 444444332 122221110 01122133333 68999999999888554443321
Q ss_pred ---ccceEE---EEE-e----cCCCCeEEEEeCCCeEEEEeCCCCCceeeeccCcc--c-----eEEEEec----CCCCc
Q 021121 149 ---AYCVYN---ATW-N----PRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEF--E-----ILACDWN----KYDDC 206 (317)
Q Consensus 149 ---~~~v~~---~~~-~----~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~--~-----v~~i~~~----~~~~~ 206 (317)
..++.. ... . .. +..+++++.+|.+.-.|+++++.+..+..... . -.|.... ...+.
T Consensus 88 lv~~SP~~~~~~pvv~~~~~~~~-~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~ 166 (339)
T 2be1_A 88 LVSTSPLHLKTNIVVNDSGKIVE-DEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECEN 166 (339)
T ss_dssp HHTTCSEEEECC----------C-CEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CC
T ss_pred ceeccccccCCCceeeccccccc-CCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCC
Confidence 111211 000 0 02 56788999999999999999999888763211 0 0111111 01234
Q ss_pred EEEEEecCCcEEEEEccCCCcc---EEEEecCCCc--e-eEEEecCCCCeeEEeeecCCeEEEEecccccc
Q 021121 207 LIASASVDKSIKIWDVRNYRVP---IAVLNGHGYA--V-RKVKFSPHRRNLLASCSYDMTVCLWDFMVEDA 271 (317)
Q Consensus 207 ~l~~~~~d~~i~v~d~~~~~~~---~~~~~~~~~~--v-~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~ 271 (317)
.++.+..+..+.+.+ ++++.- .......... + .+-..+.++. + +.++.||.|..+|..++..
T Consensus 167 ~v~ig~~~y~v~~~~-~sG~~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~-~-~~~~~dg~v~A~d~~~G~~ 234 (339)
T 2be1_A 167 MIVIGKTIFELGIHS-YDGASYNVTYSTWQQNVLDVPLALQNTFSKDGM-C-IAPFRDKSLLASDLDFRIA 234 (339)
T ss_dssp EEEEEEEEEECEECC-TTSCCCCCEEEEEECCTTTHHHHTTCSSCSSSC-C-EEEETTTEEEEECSTTCCE
T ss_pred eEEEecceEEEEEEC-CCCCeEEEecccccccccccccccccccccCCc-E-EEECCCCEEEEEECCCCcE
Confidence 566666666666666 333210 1111111000 0 0000112354 3 4467788888888776663
No 340
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=96.60 E-value=0.41 Score=43.57 Aligned_cols=153 Identities=12% Similarity=0.089 Sum_probs=81.4
Q ss_pred CCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeecc----CCcceEEEEEecCCCCEEEEEcCCCE----E
Q 021121 60 ADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHE----HTREVHSADYNPTRRDSFITSSWDDT----V 131 (317)
Q Consensus 60 ~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~l~~~~~dg~----v 131 (317)
...|.+|+++|..+..+.++...+.|...+ +.++..+++..... ....+.++++.|.....++.+..+.. -
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~ 92 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWA 92 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCC
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCccc
Confidence 457999999998667788888777655443 22222222221110 23469999999864434555432211 2
Q ss_pred EEE-EcCCCceeEEeecc-------c--cceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeecc------Cccce
Q 021121 132 KLW-TVDRPTSVRTFKEH-------A--YCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPA------HEFEI 195 (317)
Q Consensus 132 ~iw-d~~~~~~~~~~~~~-------~--~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~------~~~~v 195 (317)
.|| ..+.++.-..+... . ..+..+++.|.+.+.++.+...+.|.. ....++.-..+.. ....+
T Consensus 93 ~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl~~-S~DgG~TW~~~~~~~~~~~~~~~~ 171 (789)
T 1sqj_A 93 AFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIWK-SSDRAKTWTNVTSIPDAFTNGIGY 171 (789)
T ss_dssp EEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCEEE-ESSTTSSCEEETTSCCCCSTTTCE
T ss_pred EEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCEEE-ECCCCcccCCCccCccccCCCCCe
Confidence 233 33344433333210 1 135678888875667777764444322 2222332222221 12457
Q ss_pred EEEEecCCCCcEEEEEecC
Q 021121 196 LACDWNKYDDCLIASASVD 214 (317)
Q Consensus 196 ~~i~~~~~~~~~l~~~~~d 214 (317)
..+.++|.++..++++..+
T Consensus 172 ~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 172 TSVIFDPERNGTIYASATA 190 (789)
T ss_dssp EEEEECTTSTTCEEEEESS
T ss_pred EEEEECCCCCCEEEEEEcC
Confidence 8899988666566666554
No 341
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.41 E-value=0.41 Score=46.01 Aligned_cols=205 Identities=9% Similarity=0.076 Sum_probs=116.2
Q ss_pred eecCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeec--CCCCeeEEEecCCCCCeEEEEE-
Q 021121 4 FKTPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFD--TADGVYDLAWSESHDSLLIAAV- 80 (317)
Q Consensus 4 ~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~- 80 (317)
+..+.+|.-=.|-. +..++..+. ..|+-|++.....+.+...... ....|..-.-+++..-++++|-
T Consensus 102 ~~~~e~VvfWkWis--~~~l~lVT~--------~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~ 171 (1630)
T 1xi4_A 102 HTMTDDVTFWKWIS--LNTVALVTD--------NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGIS 171 (1630)
T ss_pred cccCCCceEEEecC--CCeeEEEcC--------CeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeec
Confidence 34445566666766 566766664 4999999975332222111110 1356777777888754555543
Q ss_pred -----cCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEe--cCCCCEEEEEcC---CCEEEEEEcCCC---ceeE----
Q 021121 81 -----ADGSVKIYDTALPPTANPIRSLHEHTREVHSADYN--PTRRDSFITSSW---DDTVKLWTVDRP---TSVR---- 143 (317)
Q Consensus 81 -----~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~l~~~~~---dg~v~iwd~~~~---~~~~---- 143 (317)
-.|.+.+|..+.. ....+.+|.+....+... +....+++.+.. .+.++|.++... ....
T Consensus 172 ~~~~~v~G~mQLyS~er~----~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~ 247 (1630)
T 1xi4_A 172 AQQNRVVGAMQLYSVDRK----VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKA 247 (1630)
T ss_pred cCCCcccceeeeeecccc----cchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCcccc
Confidence 3488999998753 334455665554444332 111112222221 268888888543 1100
Q ss_pred --Eee---ccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEecCCcEE
Q 021121 144 --TFK---EHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIK 218 (317)
Q Consensus 144 --~~~---~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~ 218 (317)
.+. ...+-..++..++. ..++..-+.-|.+++||+.++..+..-+-...+|...+.++..+..+ .....|.|.
T Consensus 248 ~~~~~~~~~~~Dfpv~~~vs~k-~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~~~~~g~~-~vnr~G~vl 325 (1630)
T 1xi4_A 248 VDVFFPPEAQNDFPVAMQISEK-HDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGII-GVNRKGQVL 325 (1630)
T ss_pred ccccCCcccccCcceEEEeccc-cCEEEEEecCceEEEEecccchhhhhccccCCceEEeccCCCCCceE-EEcCCceEE
Confidence 011 12344567778877 67788889999999999999988766554455555555444233333 334566555
Q ss_pred EEEccC
Q 021121 219 IWDVRN 224 (317)
Q Consensus 219 v~d~~~ 224 (317)
-..+..
T Consensus 326 ~v~v~~ 331 (1630)
T 1xi4_A 326 SVCVEE 331 (1630)
T ss_pred EEEEcc
Confidence 555443
No 342
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=96.31 E-value=0.59 Score=42.20 Aligned_cols=237 Identities=9% Similarity=0.046 Sum_probs=113.1
Q ss_pred ceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeee-c----CCCCeeEEEecCCCCCeEEEEEcC-
Q 021121 9 NGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAF-D----TADGVYDLAWSESHDSLLIAAVAD- 82 (317)
Q Consensus 9 ~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~-~----~~~~v~~~~~~~~~~~~l~~~~~d- 82 (317)
.|.+|+++|.+++.+.++.. .|. ||.........+.+... . ....|.+|++.|..+..++++...
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~-------~gg--v~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~ 94 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAA-------IGG--AYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMY 94 (737)
T ss_dssp CCCEEEECSSSTTCEEEECS-------SSC--EEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSC
T ss_pred eeeEEEECCCCCCEEEEEec-------CCc--EEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEeccc
Confidence 78999999976677777664 344 44444444333333210 1 124589999998654555555432
Q ss_pred ------CeEEEEEeCCC-CCCCCcee-ec--cC---CcceEEEEEecCCCCEEEEEcCCCEEEEE-EcCCCceeEEeec-
Q 021121 83 ------GSVKIYDTALP-PTANPIRS-LH--EH---TREVHSADYNPTRRDSFITSSWDDTVKLW-TVDRPTSVRTFKE- 147 (317)
Q Consensus 83 ------g~i~v~~~~~~-~~~~~~~~-~~--~~---~~~v~~~~~~~~~~~~l~~~~~dg~v~iw-d~~~~~~~~~~~~- 147 (317)
+...||.-..+ +..+.+.. +. .+ ...+..++++|.....++.+...|. -+| ..+.++.-..+..
T Consensus 95 ~~~~~~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~g~-gl~~S~DgG~tW~~~~~~ 173 (737)
T 2cn3_A 95 TNDWLPNMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRCGN-GLWRSTDYGVTWSKVESF 173 (737)
T ss_dssp SSSSSCCCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECSTTC-CEEEESSTTSSCEECTTC
T ss_pred ccccccCCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeeccCC-cEEEeCCCCcceecccCC
Confidence 12556665433 22222221 00 00 1124678899876656777764321 123 2233332222211
Q ss_pred ----------------cccceEEEEEecCCC------CeEEEEeCCCeEEEEeCCC-CCceeeeccCc-c-ceEEEEecC
Q 021121 148 ----------------HAYCVYNATWNPRHS------DVFCSASGDCTLRIWDVRE-MGSTMIIPAHE-F-EILACDWNK 202 (317)
Q Consensus 148 ----------------~~~~v~~~~~~~~~~------~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~-~-~v~~i~~~~ 202 (317)
....+..+.++|.+. ..+.++..++.-.+|-... ++.-..+.... . ....+.++|
T Consensus 174 ~~~~~~~~~p~~~~~~~~~g~~~v~~dp~~~~~~~~~~~v~~~~~~~~~~v~~S~DgG~tW~~~~~~p~~~~~~~~~~~~ 253 (737)
T 2cn3_A 174 PNPGTYIYDPNFDYTKDIIGVVWVVFDKSSSTPGNPTKTIYVGVADKNESIYRSTDGGVTWKAVPGQPKGLLPHHGVLAS 253 (737)
T ss_dssp CCCCCCBSCTTSTTTCSBCCEEEEEECGGGSCTTSCCSCEEEEESCSSCCEEEESSTTSCCEECTTCCCSSEEEEEEECT
T ss_pred CCCcccccCcccccccCCCCEEEEEcCCCCcccCCCCCEEEEEecCCCccEEEEcCCCCceEECCCCCCcccceEEEECC
Confidence 112377788887643 2566665554322343333 33222222111 1 124456777
Q ss_pred CCCcEEEEEe---------cCCcEEEEEccCCCccEEEEecCC-------CceeEEEecCCCCeeEEeeecC
Q 021121 203 YDDCLIASAS---------VDKSIKIWDVRNYRVPIAVLNGHG-------YAVRKVKFSPHRRNLLASCSYD 258 (317)
Q Consensus 203 ~~~~~l~~~~---------~d~~i~v~d~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~~l~~~~~d 258 (317)
++.++++.. ..+.|...+-. ...-....... .....|+++|..+..|+.++.+
T Consensus 254 -~~~l~~~~~d~~g~y~~~~~g~v~~s~d~--G~tW~~i~~~~~~~~~~~~~~~~i~v~p~~~~~ly~~~~~ 322 (737)
T 2cn3_A 254 -NGMLYITYGDTCGPYDGNGKGQVWKFNTR--TGEWIDITPIPYSSSDNRFCFAGLAVDRQNPDIIMVTSMN 322 (737)
T ss_dssp -TSEEEEEEESSCCSSCCSCCEEEEEEETT--TCCEEECCSSCTTSTTCCSEEEEEEECTTCTTCEEEEEEC
T ss_pred -CCeEEEEecCCCCccccccCceEEEEeCC--CCCEEEccCCCCCCcccccccccEEEcCCCCCEEEEEecc
Confidence 666665543 22334433322 21122222111 1124588888765556665543
No 343
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=96.31 E-value=0.62 Score=42.42 Aligned_cols=158 Identities=11% Similarity=0.049 Sum_probs=82.0
Q ss_pred CcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeec-----CCCCeeEEEecCCCCCeEEEEEc
Q 021121 7 PFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFD-----TADGVYDLAWSESHDSLLIAAVA 81 (317)
Q Consensus 7 ~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~l~~~~~ 81 (317)
...|.+|+++|.+++.+.+++. .|.|. .........+.+.... ....+.+|++.|..+..+.++..
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~-------~ggv~--rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g 84 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTD-------IGGAY--RWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQG 84 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEES-------SSCEE--EEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEEC
T ss_pred CCcEEEEEECCCCCCEEEEEec-------CCCEE--EecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeC
Confidence 4689999999976677777664 44443 3333333333332110 12469999999865455655543
Q ss_pred CCe----EEEEEeCC-CCCCCCcee-ec-----cCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeec---
Q 021121 82 DGS----VKIYDTAL-PPTANPIRS-LH-----EHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKE--- 147 (317)
Q Consensus 82 dg~----i~v~~~~~-~~~~~~~~~-~~-----~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~--- 147 (317)
+.. -.||.-.. ++..+.+.. +. .....+..+++.|.....++.+...+.|. ...+.++.-..+..
T Consensus 85 ~~~~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl~-~S~DgG~TW~~~~~~~~ 163 (789)
T 1sqj_A 85 RYVGDEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIW-KSSDRAKTWTNVTSIPD 163 (789)
T ss_dssp SCTTSSCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCEE-EESSTTSSCEEETTSCC
T ss_pred ccCCCcccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCEE-EECCCCcccCCCccCcc
Confidence 311 34444332 222222211 00 00113556788876544666666444332 12233333333321
Q ss_pred ---cccceEEEEEecCCCCeEEEEeCC-CeE
Q 021121 148 ---HAYCVYNATWNPRHSDVFCSASGD-CTL 174 (317)
Q Consensus 148 ---~~~~v~~~~~~~~~~~~l~~~~~d-g~i 174 (317)
....+..+.++|.++..++++..+ +.|
T Consensus 164 ~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~v 194 (789)
T 1sqj_A 164 AFTNGIGYTSVIFDPERNGTIYASATAPQGM 194 (789)
T ss_dssp CCSTTTCEEEEEECTTSTTCEEEEESSTTCE
T ss_pred ccCCCCCeEEEEECCCCCCEEEEEEcCCCeE
Confidence 124578899998766666666654 444
No 344
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.17 E-value=0.33 Score=43.48 Aligned_cols=191 Identities=8% Similarity=0.035 Sum_probs=96.9
Q ss_pred CeEEEEEcC----CeEEEEEeCCCCCCCCce-e-----eccCCcceEEEEEec-CCCCEEEEEcCC------CEEEEEEc
Q 021121 74 SLLIAAVAD----GSVKIYDTALPPTANPIR-S-----LHEHTREVHSADYNP-TRRDSFITSSWD------DTVKLWTV 136 (317)
Q Consensus 74 ~~l~~~~~d----g~i~v~~~~~~~~~~~~~-~-----~~~~~~~v~~~~~~~-~~~~~l~~~~~d------g~v~iwd~ 136 (317)
.+++.|+.+ ..+.+||..+. .+..+. . ....... .+++..+ ++. +++.|+.+ ..+.+||+
T Consensus 399 ~iyv~GG~~~~~~~~v~~yd~~~~-~W~~~~~~~p~~~~p~~R~~-hs~~~~~~~~~-lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 399 DVFYMGGSNPYRVNEILQLSIHYD-KIDMKNIEVSSSEVPVARMC-HTFTTISRNNQ-LLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CEEEECCBSSSBCCCEEEEEECSS-CEEEEECCCCCSCCCCCCBS-CEEEEETTTTE-EEEECCBSSTTCBCCCCEEEET
T ss_pred EEEEECCCCCCCcCcEEEEECCCC-eEEEeccCCCCCCCCccccc-eEEEEEccCCE-EEEEcCCCCCCCccccEEEEeC
Confidence 577777653 45888888754 222222 1 1111111 2233332 555 67777643 35788898
Q ss_pred CCCceeE--EeeccccceEEEEEecCCCCeEEEEeCCC--eEEEEeCCCCCceee-----eccCccceEEEEecCCCCcE
Q 021121 137 DRPTSVR--TFKEHAYCVYNATWNPRHSDVFCSASGDC--TLRIWDVREMGSTMI-----IPAHEFEILACDWNKYDDCL 207 (317)
Q Consensus 137 ~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~-----~~~~~~~v~~i~~~~~~~~~ 207 (317)
.+.+-.. .+......- +.+...+ +.+++.|+.++ .+.+||+.+.+=... .........++.+....+.+
T Consensus 476 ~t~~W~~~~~~p~~R~~h-~~~~~~~-~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~i 553 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRH-SACSLPD-GNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQG 553 (695)
T ss_dssp TTTEEEECCCCSBCCBSC-EEEECTT-SCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEE
T ss_pred CCCcEEECCCCCCCcccc-eEEEEcC-CEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEE
Confidence 8753221 111111111 2222224 78888887655 689999887531111 11112222335555523778
Q ss_pred EEEEecC-------CcEEEEEccCCCc--c--EEEEec---CCCceeEEEecCCCCeeEEeeec--------CCeEEEEe
Q 021121 208 IASASVD-------KSIKIWDVRNYRV--P--IAVLNG---HGYAVRKVKFSPHRRNLLASCSY--------DMTVCLWD 265 (317)
Q Consensus 208 l~~~~~d-------~~i~v~d~~~~~~--~--~~~~~~---~~~~v~~~~~~~~~~~~l~~~~~--------d~~i~vwd 265 (317)
++.|+.+ ..+.+||+.+..- . ...+.. ....-.+++...+++ +++.|+. ...+.+||
T Consensus 554 yv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~-iyv~GG~~~~~~~~~~~~v~~yd 632 (695)
T 2zwa_A 554 IILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRK-LLIVGGTSPSGLFDRTNSIISLD 632 (695)
T ss_dssp EEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTE-EEEECCBCSSCCCCTTTSEEEEE
T ss_pred EEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCE-EEEECCccCCCCCCCCCeEEEEE
Confidence 8888762 3588999887651 0 111111 111111233333354 6777774 34589999
Q ss_pred ccccc
Q 021121 266 FMVED 270 (317)
Q Consensus 266 ~~~~~ 270 (317)
+.+.+
T Consensus 633 ~~t~~ 637 (695)
T 2zwa_A 633 PLSET 637 (695)
T ss_dssp TTTTE
T ss_pred CCCCe
Confidence 88765
No 345
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.09 E-value=0.43 Score=38.54 Aligned_cols=231 Identities=11% Similarity=0.063 Sum_probs=122.8
Q ss_pred CCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceee----ccCCcceEEEEEecC---CCCEEEEE---cCCC
Q 021121 60 ADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSL----HEHTREVHSADYNPT---RRDSFITS---SWDD 129 (317)
Q Consensus 60 ~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~----~~~~~~v~~~~~~~~---~~~~l~~~---~~dg 129 (317)
-.....|+|.|++ .++++--..|.|++++...+ ....+..+ .........|+++|+ +. .|+.. ..++
T Consensus 31 L~~P~~ia~~pdG-~llVter~~G~I~~v~~~~g-~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g-~lYv~yt~~~~~ 107 (347)
T 3das_A 31 LNSPWGLAPLPGG-DLLVSSRDEATITRVDAKTG-RKTELGEVPGVSPSGEGGLLGIALSPDYASDH-MVYAYFTSASDN 107 (347)
T ss_dssp CSSEEEEEECTTS-CEEEEETTTCEEEEECTTTC-CEEEEEECTTCCCBTTBSEEEEEECTTHHHHC-EEEEEEECSSSE
T ss_pred CCCceEEEEcCCC-cEEEEEecCCEEEEEECCCC-cEeeecccCceeecCCCCceeeEeccccccCC-EEEEEEecCCCC
Confidence 4467899999998 45555444899988875433 11112111 123456789999985 33 34332 3456
Q ss_pred EEEEEEcCCCc----------ee-EEee-ccccceEEEEEecCCCCeEEEEeC-------------CCeEEEEeCCCC--
Q 021121 130 TVKLWTVDRPT----------SV-RTFK-EHAYCVYNATWNPRHSDVFCSASG-------------DCTLRIWDVREM-- 182 (317)
Q Consensus 130 ~v~iwd~~~~~----------~~-~~~~-~~~~~v~~~~~~~~~~~~l~~~~~-------------dg~i~i~d~~~~-- 182 (317)
.|.-|.+..+. .+ ..+. ........|.|.|+ +.+.++.+. .|.|.-.+....
T Consensus 108 ~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpD-G~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip 186 (347)
T 3das_A 108 RIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPD-KMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPA 186 (347)
T ss_dssp EEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTT-SCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBC
T ss_pred EEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCC-CCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCcc
Confidence 77777765421 11 1121 11223567999998 677766542 355655565432
Q ss_pred ------CceeeeccCccceEEEEecCCCCcEEEEEe-cCCcEEEEEccCC-----------------CccEEEEecCCCc
Q 021121 183 ------GSTMIIPAHEFEILACDWNKYDDCLIASAS-VDKSIKIWDVRNY-----------------RVPIAVLNGHGYA 238 (317)
Q Consensus 183 ------~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~-~d~~i~v~d~~~~-----------------~~~~~~~~~~~~~ 238 (317)
.....-.++.. ...++|+| ++.++++=. .++.=.+--++.+ ..++..+..+...
T Consensus 187 ~~nPf~~~~i~a~G~RN-p~Gla~dp-~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~a 264 (347)
T 3das_A 187 PGNPFPGSPVYSYGHRN-VQGLAWDD-KQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEAS 264 (347)
T ss_dssp TTCSSTTCCEEEBCCSB-CCEEEECT-TCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCC
T ss_pred CCCCCCCCeEEeeCCCC-cceEEECC-CCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCC
Confidence 11111124443 46789999 777665532 2221222222211 1123333323235
Q ss_pred eeEEEecCCCCeeEEeeecCCeEEEEecccccc---eeeeeecccceeEeEEEEeccCCeEEEe
Q 021121 239 VRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDA---LVGRYDHHTEFAVGVDMSVLVEGLLAST 299 (317)
Q Consensus 239 v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~l~s~ 299 (317)
...++|.. +. ++...-..+.|....+...+. ....+.+....+.+++..|+ +.++++.
T Consensus 265 p~G~~~~~-g~-~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pD-G~lyv~t 325 (347)
T 3das_A 265 PSGIAYAE-GS-VWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGG-DKLWLVT 325 (347)
T ss_dssp EEEEEEET-TE-EEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEET-TEEEEEE
T ss_pred CcceEEEc-Cc-eeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCC-CcEEEEE
Confidence 56778773 44 555555555666666654431 12233344567999999998 5655543
No 346
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.09 E-value=0.2 Score=40.31 Aligned_cols=111 Identities=7% Similarity=0.044 Sum_probs=69.9
Q ss_pred EEEEEcCCCEEEEEEcCCCceeEEeeccc-cceEEEEEe--cCCCCeEEEE-eCCCeEEEEeCCCCCceeeecc----Cc
Q 021121 121 SFITSSWDDTVKLWTVDRPTSVRTFKEHA-YCVYNATWN--PRHSDVFCSA-SGDCTLRIWDVREMGSTMIIPA----HE 192 (317)
Q Consensus 121 ~l~~~~~dg~v~iwd~~~~~~~~~~~~~~-~~v~~~~~~--~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~----~~ 192 (317)
+++.++.||.|.-+|.++|+...+++... .++....-. +.++..++.. +.||.|..+|..++.....+.. ..
T Consensus 12 ~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~~ 91 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVST 91 (339)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHTT
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccceec
Confidence 78999999999999999999988887541 222221100 1112344343 6899999999887744433321 11
Q ss_pred cceEEEEecC--------CCCcEEEEEecCCcEEEEEccCCCccEEEEe
Q 021121 193 FEILACDWNK--------YDDCLIASASVDKSIKIWDVRNYRVPIAVLN 233 (317)
Q Consensus 193 ~~v~~i~~~~--------~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~ 233 (317)
.++.. .-.| ..+..+++|+.++.+...|+++++. +..+.
T Consensus 92 SP~~~-~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~-~W~~~ 138 (339)
T 2be1_A 92 SPLHL-KTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEI-ISAFG 138 (339)
T ss_dssp CSEEE-ECC----------CCEEEEECEEEEEEEEEETTTCCE-EEEES
T ss_pred ccccc-CCCceeecccccccCCEEEEEecCCEEEEEECCCCcE-EEEEe
Confidence 12221 1000 0456788999999999999999875 55544
No 347
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.03 E-value=0.79 Score=41.05 Aligned_cols=187 Identities=9% Similarity=0.084 Sum_probs=95.9
Q ss_pred EEEEEcCC----CEEEEEEcCCCceeEEe-e-----ccc-cceEEEEEec-CCCCeEEEEeCCC------eEEEEeCCCC
Q 021121 121 SFITSSWD----DTVKLWTVDRPTSVRTF-K-----EHA-YCVYNATWNP-RHSDVFCSASGDC------TLRIWDVREM 182 (317)
Q Consensus 121 ~l~~~~~d----g~v~iwd~~~~~~~~~~-~-----~~~-~~v~~~~~~~-~~~~~l~~~~~dg------~i~i~d~~~~ 182 (317)
+++.|+.+ ..+.+||+.+++-...- . ... ..-.+++..+ + +.+++.|+.++ .+.+||+.+.
T Consensus 400 iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~-~~lyv~GG~~~~~~~~~dv~~yd~~t~ 478 (695)
T 2zwa_A 400 VFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRN-NQLLLIGGRKAPHQGLSDNWIFDMKTR 478 (695)
T ss_dssp EEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTT-TEEEEECCBSSTTCBCCCCEEEETTTT
T ss_pred EEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccC-CEEEEEcCCCCCCCccccEEEEeCCCC
Confidence 77777643 46888998876433222 1 011 1112233332 4 67777777543 4788898764
Q ss_pred C--ceeeeccCccceEEEEecCCCCcEEEEEecCC--cEEEEEccCCCccEEEEec------CCCceeEEEecCCCCeeE
Q 021121 183 G--STMIIPAHEFEILACDWNKYDDCLIASASVDK--SIKIWDVRNYRVPIAVLNG------HGYAVRKVKFSPHRRNLL 252 (317)
Q Consensus 183 ~--~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~--~i~v~d~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~l 252 (317)
+ .+..+...... .+++... ++.+++.|+.++ .+.+||..+.. -..... .......+.+..+...++
T Consensus 479 ~W~~~~~~p~~R~~-h~~~~~~-~~~iyv~GG~~~~~~v~~yd~~t~~--W~~~~~~g~~p~~r~~~~a~v~~~~~~~iy 554 (695)
T 2zwa_A 479 EWSMIKSLSHTRFR-HSACSLP-DGNVLILGGVTEGPAMLLYNVTEEI--FKDVTPKDEFFQNSLVSAGLEFDPVSKQGI 554 (695)
T ss_dssp EEEECCCCSBCCBS-CEEEECT-TSCEEEECCBCSSCSEEEEETTTTE--EEECCCSSGGGGSCCBSCEEEEETTTTEEE
T ss_pred cEEECCCCCCCccc-ceEEEEc-CCEEEEECCCCCCCCEEEEECCCCc--eEEccCCCCCCCcccceeEEEEeCCCCEEE
Confidence 2 11112211111 2233323 677888887655 68999988753 222221 112223355565523367
Q ss_pred Eeeec--C-----CeEEEEecccccc---e-eeeeec---ccceeEeEEEEeccCCeEEEeecC--------CcEEEEec
Q 021121 253 ASCSY--D-----MTVCLWDFMVEDA---L-VGRYDH---HTEFAVGVDMSVLVEGLLASTGWD--------ELVYVWQQ 310 (317)
Q Consensus 253 ~~~~~--d-----~~i~vwd~~~~~~---~-~~~~~~---~~~~v~~~~~~~~~~~~l~s~~~d--------g~i~~w~~ 310 (317)
+.|+. + +.+.+||+.+..- . ...... ....-.+++...+ +.+++.||.+ ..+.+||+
T Consensus 555 v~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~v~~yd~ 633 (695)
T 2zwa_A 555 ILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITP-RKLLIVGGTSPSGLFDRTNSIISLDP 633 (695)
T ss_dssp EECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEET-TEEEEECCBCSSCCCCTTTSEEEEET
T ss_pred EECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCC-CEEEEECCccCCCCCCCCCeEEEEEC
Confidence 77765 2 4588999887651 0 111111 1111112233332 5677777743 45888887
Q ss_pred CCC
Q 021121 311 GMD 313 (317)
Q Consensus 311 ~~~ 313 (317)
.++
T Consensus 634 ~t~ 636 (695)
T 2zwa_A 634 LSE 636 (695)
T ss_dssp TTT
T ss_pred CCC
Confidence 653
No 348
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.92 E-value=0.65 Score=39.16 Aligned_cols=105 Identities=9% Similarity=0.134 Sum_probs=59.8
Q ss_pred cceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCcee--eecc------CccceEEEEecCC---CCcEEEEEec-----
Q 021121 150 YCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM--IIPA------HEFEILACDWNKY---DDCLIASASV----- 213 (317)
Q Consensus 150 ~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~--~~~~------~~~~v~~i~~~~~---~~~~l~~~~~----- 213 (317)
.....|+|.|+ ++++++-...+.|++++..+++... .+.. .......|+++|. ++.+.++-+.
T Consensus 27 ~~P~~~a~~pd-G~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 27 NKPHALLWGPD-NQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp SSEEEEEECTT-SCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCceEEEEcCC-CcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 45789999998 7777655444578888865554322 2221 2345779999983 3444444432
Q ss_pred -------CCcEEEEEccCCC-------ccEEEEec-CCCceeEEEecCCCCeeEEee
Q 021121 214 -------DKSIKIWDVRNYR-------VPIAVLNG-HGYAVRKVKFSPHRRNLLASC 255 (317)
Q Consensus 214 -------d~~i~v~d~~~~~-------~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~ 255 (317)
...|..|+..... ..+..+.. .......|+|.|+|.-++.+|
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 2356666654321 11111221 123468999999998434434
No 349
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.91 E-value=0.47 Score=37.49 Aligned_cols=175 Identities=7% Similarity=-0.032 Sum_probs=87.4
Q ss_pred EEecCCCCEEEEEcCC-------------CEEEEEEcCCCceeEEeeccccceEEEEEecCCCCeEEEEe----CCCeEE
Q 021121 113 DYNPTRRDSFITSSWD-------------DTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSAS----GDCTLR 175 (317)
Q Consensus 113 ~~~~~~~~~l~~~~~d-------------g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~----~dg~i~ 175 (317)
-+++++..+..+...+ ..|+..++...+... +.... +..|+++ ++.|+-.. ....|+
T Consensus 59 ~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~-l~~~~----~~~~s~~-g~~Iy~~~~~~~~~~~Iy 132 (302)
T 3s25_A 59 YINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTV-LDPDP----CIYASLI-GNYIYYLHYDTQTATSLY 132 (302)
T ss_dssp EEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEE-EECSC----EEEEEEE-TTEEEEEEESSSSCEEEE
T ss_pred eEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceE-eecCC----ccEEEEe-CCEEEEEeecCCCCceEE
Confidence 4578887444444332 468888887665333 32222 2256777 55555444 345666
Q ss_pred EEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEe-cCCcEEEEEccCCCccEEEEecCCCceeEEEecCCCCeeEEe
Q 021121 176 IWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASAS-VDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLAS 254 (317)
Q Consensus 176 i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 254 (317)
..++.... ...+..+.. .++++ +++.|.-.+ ....|.+.++..... ..+.. .... ..++|+++.+..+
T Consensus 133 ~~~~dGs~-~~~lt~~~~----~~~~~-~g~~iy~t~~g~~~Iy~~~l~g~~~--~~l~~--~~~~-~~~~P~g~~iy~t 201 (302)
T 3s25_A 133 RIRIDGEE-KKKIKNHYL----FTCNT-SDRYFYYNNPKNGQLYRYDTASQSE--ALFYD--CNCY-KPVVLDDTNVYYM 201 (302)
T ss_dssp EEETTSCC-CEEEESSCC----CCSEE-ETTEEEEECTTTCCEEEEETTTTEE--EEEEC--SCEE-EEEEEETTEEEEE
T ss_pred EEECCCCC-eEEEeCCCc----eEeeE-ECCEEEEEeCCCceEEEEECCCCCE--EEEeC--CCcc-ceeeecCCEEEEE
Confidence 66766433 344443332 34566 455555444 356788888766442 22222 1222 3466888854444
Q ss_pred eecC-CeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEee--cCCcEEEEecC
Q 021121 255 CSYD-MTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTG--WDELVYVWQQG 311 (317)
Q Consensus 255 ~~~d-~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~--~dg~i~~w~~~ 311 (317)
-..+ ..|..-++..... ..+.. ..+ ..|+|. +..|+-+. ..+.|..=+++
T Consensus 202 ~~~~~~~I~~~~ldG~~~--~~Lt~--~~~--~~~~~~-g~~Iy~~~~~~~~~i~~~~~D 254 (302)
T 3s25_A 202 DVNRDNAIVHVNINNPNP--VVLTE--ANI--EHYNVY-GSLIFYQRGGDNPALCVVKND 254 (302)
T ss_dssp EGGGTTEEEEECSSSCCC--EECSC--SCE--EEEEEE-TTEEEEEECSSSCEEEEEETT
T ss_pred EcCCCcEEEEEECCCCCe--EEEeC--CCc--ceEEEC-CCEEEEEECCCCcEEEEEECC
Confidence 3333 3566656655442 22222 222 236777 45444332 23444444443
No 350
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.79 E-value=0.53 Score=37.20 Aligned_cols=176 Identities=10% Similarity=0.022 Sum_probs=88.2
Q ss_pred EEecCCCCEEEEEc----CCCEEEEEEcCCCceeEEeeccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeee
Q 021121 113 DYNPTRRDSFITSS----WDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMII 188 (317)
Q Consensus 113 ~~~~~~~~~l~~~~----~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 188 (317)
.|++++. .|+-.. .+..|...++.... ...+..+.. ..++|++..+..+......|...++..+.....+
T Consensus 110 ~~s~~g~-~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~ 183 (302)
T 3s25_A 110 YASLIGN-YIYYLHYDTQTATSLYRIRIDGEE-KKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFY 183 (302)
T ss_dssp EEEEETT-EEEEEEESSSSCEEEEEEETTSCC-CEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEE
T ss_pred EEEEeCC-EEEEEeecCCCCceEEEEECCCCC-eEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEe
Confidence 6777777 555443 45567777776433 344443322 3456774444445444678888888765443333
Q ss_pred ccCccceEEEEecCCCCcEEEEEecC--CcEEEEEccCCCccEEEEecCCCceeEEEecCCCCeeEEee-ecCCeEEEEe
Q 021121 189 PAHEFEILACDWNKYDDCLIASASVD--KSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASC-SYDMTVCLWD 265 (317)
Q Consensus 189 ~~~~~~v~~i~~~~~~~~~l~~~~~d--~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~-~~d~~i~vwd 265 (317)
.+ ... ..+.| ++..|+-...+ ..|..-++.... ...+.. ..+ ..|+|++..+..+. ...+.|..-+
T Consensus 184 ~~---~~~-~~~~P-~g~~iy~t~~~~~~~I~~~~ldG~~--~~~Lt~--~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~ 252 (302)
T 3s25_A 184 DC---NCY-KPVVL-DDTNVYYMDVNRDNAIVHVNINNPN--PVVLTE--ANI--EHYNVYGSLIFYQRGGDNPALCVVK 252 (302)
T ss_dssp CS---CEE-EEEEE-ETTEEEEEEGGGTTEEEEECSSSCC--CEECSC--SCE--EEEEEETTEEEEEECSSSCEEEEEE
T ss_pred CC---Ccc-ceeee-cCCEEEEEEcCCCcEEEEEECCCCC--eEEEeC--CCc--ceEEECCCEEEEEECCCCcEEEEEE
Confidence 32 222 23557 66666655433 356666665543 233332 233 34788888544432 2345666666
Q ss_pred cccccceeeeeecccceeEeEEEEeccCCeEEEeecCCcEEEEecC
Q 021121 266 FMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQG 311 (317)
Q Consensus 266 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~ 311 (317)
+..... +.+... .+. .+++.++.+..+--..+.|..-+++
T Consensus 253 ~DG~~r--~~l~~~--~~~--~i~i~~d~Iy~td~~~~~i~~~~~d 292 (302)
T 3s25_A 253 NDGTGF--KELAKG--EFC--NINVTSQYVYFTDFVSNKEYCTSTQ 292 (302)
T ss_dssp TTSCCC--EEEEES--CEE--EEEECSSEEEEEETTTCCEEEEESS
T ss_pred CCCCcc--EEeeCC--ccc--eEEEeCCEEEEEECCCCeEEEEECC
Confidence 654331 222211 233 3445523344444445555544443
No 351
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.50 E-value=1.4 Score=39.89 Aligned_cols=269 Identities=9% Similarity=0.033 Sum_probs=139.8
Q ss_pred ceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeec----CCCCeeEEEecCCCCCeEEEEEcCCe
Q 021121 9 NGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFD----TADGVYDLAWSESHDSLLIAAVADGS 84 (317)
Q Consensus 9 ~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~l~~~~~dg~ 84 (317)
.|.++...+ ++.+.+++. . -|..++..... +....... ....|.++...+++ ..|..|+.. -
T Consensus 147 ~i~~i~~d~--~g~lWigt~-------~-Gl~~~~~~~~~--~~~~~~~~~~~~~~~~i~~i~~d~~~-~~lWigt~~-G 212 (758)
T 3ott_A 147 TIYSIIRTK--DNQIYVGTY-------N-GLCRYIPSNGK--FEGIPLPVHSSQSNLFVNSLLEDTTR-QCVWIGTEG-Y 212 (758)
T ss_dssp CEEEEEECT--TCCEEEEET-------T-EEEEEETTTTE--EEEECCCCCTTCSSCCEEEEEEETTT-TEEEEEEEE-E
T ss_pred eEEEEEEcC--CCCEEEEeC-------C-CHhhCccCCCc--eEEecCCCccccccceeEEEEEECCC-CEEEEEECC-C
Confidence 455665555 566666653 3 46667655432 21111000 12247888777665 355556644 4
Q ss_pred EEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEee-------ccccceEEEEE
Q 021121 85 VKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFK-------EHAYCVYNATW 157 (317)
Q Consensus 85 i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~-------~~~~~v~~~~~ 157 (317)
+..++.... .......+ ....|.++...+++. |..|+. +-+.+++..+++...... -....|.++..
T Consensus 213 l~~~~~~~~-~~~~~~~l--~~~~i~~i~~d~~g~--lWigT~-~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~ 286 (758)
T 3ott_A 213 LFQYFPSTG-QIKQTEAF--HNNSIKSLALDGNGD--LLAGTD-NGLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFA 286 (758)
T ss_dssp EEEEETTTT-EEEEEEEE--EEEEEEEEEECTTCC--EEEEET-TEEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEE
T ss_pred CeEEcCCCC-eEEeccCC--CCCeEEEEEEcCCCC--EEEEeC-CceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEE
Confidence 777886543 11111111 234578887777765 445554 457888877654322211 11235888877
Q ss_pred ecCCCCeEEEEeCCCeEEEEeCCCCCceeeec-------cCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCc-cE
Q 021121 158 NPRHSDVFCSASGDCTLRIWDVREMGSTMIIP-------AHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRV-PI 229 (317)
Q Consensus 158 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-------~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~-~~ 229 (317)
..+ +. |-.|+..| +.++... . ....+. .....|.++.-.+ ++.+.+ |+.+| +..++..+... ..
T Consensus 287 D~~-g~-lWiGT~~G-l~~~~~~-~-~~~~~~~~~~~~~~~~~~v~~i~~D~-~g~lWi-Gt~~G-l~~~~~~~~~~~~~ 358 (758)
T 3ott_A 287 DQE-HN-IWLGTDYG-ISLSRYN-S-ALQFIPISQITGTGDGNQFYSLFRDS-KGFYWF-GGANG-LIRFTDPAGERHDA 358 (758)
T ss_dssp CTT-CC-EEEEESSS-EEEECCC-C--CEEEEHHHHSCSCCCCBEEEEEECT-TCCEEE-EETTE-EEEESCTTSSCCCC
T ss_pred cCC-CC-EEEEeCCc-ccccccC-C-ceeEEecccCCCCCCCceEEEEEEcC-CCCEEE-eeCCc-ceeeccccccccee
Confidence 765 44 44566666 5444322 1 111111 1234578888776 665544 45554 66676554211 12
Q ss_pred EEEec-------CCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeec-----ccceeEeEEEEeccCCeEE
Q 021121 230 AVLNG-------HGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDH-----HTEFAVGVDMSVLVEGLLA 297 (317)
Q Consensus 230 ~~~~~-------~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~l~ 297 (317)
..+.. ....|.++.-.+++. |..|+ ++-+..+|..+++........ ....|.++...+ ...|.
T Consensus 359 ~~~~~~~~~~~l~~~~v~~i~~d~~g~--lWigt-~~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~--~g~lW 433 (758)
T 3ott_A 359 IWYRMGDKTYPLSHNRIRHIYEDKEQQ--LWIAT-DGSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDT--AGQLW 433 (758)
T ss_dssp EEECTTCSSSCCSCSCEEEEEECTTSC--EEEEE-TTEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECT--TSEEE
T ss_pred EEeccCCcCCCCCCCceEEEEECCCCC--EEEEe-CCcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcC--CCCEE
Confidence 22210 123588888888876 44455 456888998765411111111 123466666554 34566
Q ss_pred EeecCCcEEEEec
Q 021121 298 STGWDELVYVWQQ 310 (317)
Q Consensus 298 s~~~dg~i~~w~~ 310 (317)
.|+..+-|..++.
T Consensus 434 igT~~~Gl~~~~~ 446 (758)
T 3ott_A 434 ISTCLGGIFVVDK 446 (758)
T ss_dssp EEESSSCEEEEEH
T ss_pred EEECCCceEEEcc
Confidence 6666555777764
No 352
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=93.86 E-value=3.6 Score=37.13 Aligned_cols=109 Identities=13% Similarity=0.085 Sum_probs=59.8
Q ss_pred CeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeecc----CCcceEEEEEecCCCCEEEEEcCC-------CE
Q 021121 62 GVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHE----HTREVHSADYNPTRRDSFITSSWD-------DT 130 (317)
Q Consensus 62 ~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~l~~~~~d-------g~ 130 (317)
.|..|+++|..+..+.++...+.|...+ +.++..+.+..... ....|.+|++.|.....++++... +.
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~-D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~ 102 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWD-PSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNM 102 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEE-TTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCC
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeC-CCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCC
Confidence 7999999998666777777666555443 22222222211111 124689999998654445544321 12
Q ss_pred EEEEEc-CCCceeEEeec-c--------ccceEEEEEecCCCCeEEEEeCC
Q 021121 131 VKLWTV-DRPTSVRTFKE-H--------AYCVYNATWNPRHSDVFCSASGD 171 (317)
Q Consensus 131 v~iwd~-~~~~~~~~~~~-~--------~~~v~~~~~~~~~~~~l~~~~~d 171 (317)
..||.- +.++.-..+.. . ...+..++++|.+++.++.+...
T Consensus 103 ~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~ 153 (737)
T 2cn3_A 103 GAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRC 153 (737)
T ss_dssp CEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECST
T ss_pred ccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeecc
Confidence 344443 33333222221 1 01246799999877778777643
No 353
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=93.85 E-value=2.6 Score=35.55 Aligned_cols=245 Identities=10% Similarity=0.022 Sum_probs=119.2
Q ss_pred CeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeec---------cCCcceEEEEEecC----CCCEEEEEcC-
Q 021121 62 GVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLH---------EHTREVHSADYNPT----RRDSFITSSW- 127 (317)
Q Consensus 62 ~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~---------~~~~~v~~~~~~~~----~~~~l~~~~~- 127 (317)
....|+|.|++...|+++...|.|++++.........+..+. ........|+|+|+ +. +.++-+.
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~-lYv~yt~~ 93 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGK-LYVSYTTN 93 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCE-EEEEEEEC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCE-EEEEEeCC
Confidence 467899999984346666788999999643221112222211 11356788999986 33 3333221
Q ss_pred -C----------CEEEEEEcCCC----------ceeEEee--ccccceEEEEEecCCCCeEEEEeCC-------------
Q 021121 128 -D----------DTVKLWTVDRP----------TSVRTFK--EHAYCVYNATWNPRHSDVFCSASGD------------- 171 (317)
Q Consensus 128 -d----------g~v~iwd~~~~----------~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~d------------- 171 (317)
+ ..|.-|.+..+ +.+..+. ........|+|.|+ +.+.++.+..
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpD-G~LYv~~Gd~~~~~~~~~~~q~~ 172 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPD-GFLYIILGDGMITLDDMEEMDGL 172 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTT-SCEEEEECCTTCCHHHHHHCTTC
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCC-CcEEEEeCCCCCCCCccccccCc
Confidence 1 24555666421 2222222 12234688999999 6776665543
Q ss_pred ----CeEEEEeCCCCC--------------------ceeeeccCccceEEEEecCCCC----c-EEEEEecCC----cEE
Q 021121 172 ----CTLRIWDVREMG--------------------STMIIPAHEFEILACDWNKYDD----C-LIASASVDK----SIK 218 (317)
Q Consensus 172 ----g~i~i~d~~~~~--------------------~~~~~~~~~~~v~~i~~~~~~~----~-~l~~~~~d~----~i~ 218 (317)
|+|.-.|..... ...--.+|.. ...++|+|.++ . .+..+...| .-.
T Consensus 173 ~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RN-p~gla~dp~tg~~~G~l~~~~~D~~G~~~~~~e 251 (463)
T 2wg3_C 173 SDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHD-PGRCAVDRHPTDININLTILCSDSNGKNRSSAR 251 (463)
T ss_dssp CSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSS-CCBEEEESSCSSTTCSEEEEEECC------CEE
T ss_pred CCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCC-cceEEECCCCCCcccceEEEecccCCCCCCCCe
Confidence 334444544310 0011123333 35788998433 3 333332112 122
Q ss_pred EEEccCCC-----ccEEEEecCC-CceeEEEecCCCC-----eeEEeeecCCeEEEEecccccce--eeee---------
Q 021121 219 IWDVRNYR-----VPIAVLNGHG-YAVRKVKFSPHRR-----NLLASCSYDMTVCLWDFMVEDAL--VGRY--------- 276 (317)
Q Consensus 219 v~d~~~~~-----~~~~~~~~~~-~~v~~~~~~~~~~-----~~l~~~~~d~~i~vwd~~~~~~~--~~~~--------- 276 (317)
|..+..+. .++..+..|. ..+..+.|-.... .-++.+...+.|....+...... ...+
T Consensus 252 i~~i~~G~~yG~~~P~~~~~~~~g~Ap~G~~~Y~G~~fP~~~g~~f~~~~~g~i~~~~~~~~~~~~~~~~~~~g~~~~~~ 331 (463)
T 2wg3_C 252 ILQIIKGKDYESEPSLLEFKPFSNGPLVGGFVYRGCQSERLYGSYVFGDRNGNFLTLQQSPVTKQWQEKPLCLGTSGSCR 331 (463)
T ss_dssp EEEEC----CCSCCCCEECCC----CEEEEEECCCSSCTTTTTCEEEEETTSCEEEEEC-----CCEEEEECEEETTSSC
T ss_pred EeeeccCCCCCCCCCeEEeeCCCCccccceEEEeCCCChhhcceEEEecCCCcEEEEEeCCCCceeeEEEeecCCccccc
Confidence 33332221 3444444331 4677787753211 01344555566655554433211 1111
Q ss_pred ecccceeEeEEEEeccCCeEEEee-------cCCcEEEEecCC
Q 021121 277 DHHTEFAVGVDMSVLVEGLLASTG-------WDELVYVWQQGM 312 (317)
Q Consensus 277 ~~~~~~v~~~~~~~~~~~~l~s~~-------~dg~i~~w~~~~ 312 (317)
......+.++...|+ +.++++.. .+| +||++..
T Consensus 332 ~~~~~r~~~v~~~pd-G~Lyv~~~~~~~~~~~~G--~I~Ri~~ 371 (463)
T 2wg3_C 332 GYFSGHILGFGEDEL-GEVYILSSSKSMTQTHNG--KLYKIVD 371 (463)
T ss_dssp SCCCSEEEEEEECTT-CCEEEEEESSCGGGCSSE--EEEEEEC
T ss_pred ccccCcceEEEECCC-CCEEEEeccCCcccCCCC--cEEEecC
Confidence 112357899999998 66655554 234 5777763
No 354
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=93.82 E-value=2.7 Score=35.51 Aligned_cols=111 Identities=14% Similarity=0.122 Sum_probs=58.2
Q ss_pred cceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCC--Ccceeee-eec------CCCCeeEEEecCC---CCCe
Q 021121 8 FNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAA--PALTELV-AFD------TADGVYDLAWSES---HDSL 75 (317)
Q Consensus 8 ~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~--~~~~~~~-~~~------~~~~v~~~~~~~~---~~~~ 75 (317)
.....|+|.|+..++++++.. .|.|++++.+... ..+..+. .+. .......|+|+|+ ...+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er-------~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~l 86 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEK-------EGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKL 86 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEET-------TTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEE
T ss_pred CCceEEEECCCCCeEEEEEeC-------CceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEE
Confidence 456789999953346887765 7899999754321 1111111 011 1457899999996 2123
Q ss_pred EEEEEcC------------CeEEEEEeCCCC--C-----CCCceeec--cCCcceEEEEEecCCCCEEEEEc
Q 021121 76 LIAAVAD------------GSVKIYDTALPP--T-----ANPIRSLH--EHTREVHSADYNPTRRDSFITSS 126 (317)
Q Consensus 76 l~~~~~d------------g~i~v~~~~~~~--~-----~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~ 126 (317)
.++-+.+ ..|.-|.+.... . .+.+..+. ........|.|.|||. ++++.+
T Consensus 87 Yv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~-LYv~~G 157 (463)
T 2wg3_C 87 YVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGF-LYIILG 157 (463)
T ss_dssp EEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSC-EEEEEC
T ss_pred EEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCc-EEEEeC
Confidence 3332221 134446654321 0 11111111 1123457899999997 555443
No 355
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=93.79 E-value=1.9 Score=33.65 Aligned_cols=223 Identities=15% Similarity=0.054 Sum_probs=119.4
Q ss_pred CCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCc
Q 021121 61 DGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPT 140 (317)
Q Consensus 61 ~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~ 140 (317)
..|..++-... ..++. . ||.|..|-.....+... -......|..++..... .++. . ||.|..|-.....
T Consensus 24 ~~i~~ia~G~~--h~~~l-~-~G~v~~wG~n~~Gqlg~---p~~~~~~i~~ia~G~~h--s~~l-~-~G~v~~wG~n~~G 92 (282)
T 3qhy_B 24 SGVDAIAGGYF--HGLAL-K-GGKVLGWGANLNGQLTM---PAATQSGVDAIAAGNYH--SLAL-K-DGEVIAWGGNEDG 92 (282)
T ss_dssp SSCCEEEECSS--EEEEE-E-TTEEEEEECCSSSTTSC---CGGGGSCCCEEEECSSE--EEEE-E-TTEEEEEECCTTS
T ss_pred CCCcEEEeCCC--eEEEE-E-CCEEEEEeCCCCCCCCC---CccCCCCEEEEEeCCCE--EEEE-E-CCEEEEeeCCCCC
Confidence 35777776543 23444 4 89999998654322111 11123456666665332 3333 4 8999999765432
Q ss_pred eeEEeeccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeeccCccceEEEEecCCCCcEEEEEecCCcEEEE
Q 021121 141 SVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIW 220 (317)
Q Consensus 141 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~ 220 (317)
.+..-..-...|..++.... ..+.-. +|.|+.|-......+-........|..++... . ..++. . ||.++.|
T Consensus 93 qlg~P~~~~~~v~~ia~G~~---hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~-~-~~~~l-~-~G~v~~w 164 (282)
T 3qhy_B 93 QTTVPAEARSGVDAIAAGAW---ASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGV-Y-TALAV-K-NGGVIAW 164 (282)
T ss_dssp TTCCCGGGSSSEEEEEEETT---EEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECS-S-EEEEE-E-TTEEEEE
T ss_pred CCCCCcccCCCeEEEECcCC---EEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEccc-C-EEEEE-E-CCEEEEe
Confidence 22111112346778877643 334445 99999998765433222222334577776553 2 23333 3 7999999
Q ss_pred EccCCCccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeeeeecccceeEeEEEEeccCCeEEEee
Q 021121 221 DVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTG 300 (317)
Q Consensus 221 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~ 300 (317)
-.....+. .........|..++.-... .++. .||.+..|-......+- ........|..++... ...++. .
T Consensus 165 G~n~~gql-g~p~~~~~~v~~i~~G~~h--s~al--~~G~v~~wG~n~~gqlg-~p~~~~~~v~~i~~G~--~h~~al-~ 235 (282)
T 3qhy_B 165 GDNYFGQT-TVPAEAQSGVDDVAGGIFH--SLAL--KDGKVIAWGDNRYKQTT-VPTEALSGVSAIASGE--WYSLAL-K 235 (282)
T ss_dssp ECCTTSTT-SCCGGGGSSEEEEEECSSE--EEEE--ETTEEEEEECCTTSTTC-CCGGGGSSCCEEEECS--SCEEEE-E
T ss_pred cCCCCCCC-CCceecCCCeEEEEecCCE--EEEE--ECCeEEEEECCCCCCCC-CCcccCCCceEEEcCC--CEEEEE-E
Confidence 76653321 1111113457777665433 3443 59999999765433221 1111123466666543 233333 3
Q ss_pred cCCcEEEEecCC
Q 021121 301 WDELVYVWQQGM 312 (317)
Q Consensus 301 ~dg~i~~w~~~~ 312 (317)
||.|+.|=.+.
T Consensus 236 -~g~v~~wG~n~ 246 (282)
T 3qhy_B 236 -NGKVIAWGSSR 246 (282)
T ss_dssp -TTEEEEESTTC
T ss_pred -CCEEEEecCCC
Confidence 99999997654
No 356
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=92.51 E-value=3 Score=32.46 Aligned_cols=223 Identities=14% Similarity=0.059 Sum_probs=120.9
Q ss_pred CceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCceeeccCCcceEEEEEe
Q 021121 36 NGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYN 115 (317)
Q Consensus 36 ~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 115 (317)
+|.|+.|-.+.....-.+. .....|..++-... ..++. . ||.|..|-.....+.... ..-...|..++..
T Consensus 41 ~G~v~~wG~n~~Gqlg~p~---~~~~~i~~ia~G~~--hs~~l-~-~G~v~~wG~n~~Gqlg~P---~~~~~~v~~ia~G 110 (282)
T 3qhy_B 41 GGKVLGWGANLNGQLTMPA---ATQSGVDAIAAGNY--HSLAL-K-DGEVIAWGGNEDGQTTVP---AEARSGVDAIAAG 110 (282)
T ss_dssp TTEEEEEECCSSSTTSCCG---GGGSCCCEEEECSS--EEEEE-E-TTEEEEEECCTTSTTCCC---GGGSSSEEEEEEE
T ss_pred CCEEEEEeCCCCCCCCCCc---cCCCCEEEEEeCCC--EEEEE-E-CCEEEEeeCCCCCCCCCC---cccCCCeEEEECc
Confidence 7899999877654211111 12335777776644 34444 4 899999986543221111 1113467777776
Q ss_pred cCCCCEEEEEcCCCEEEEEEcCCCceeEEeeccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeeccCccce
Q 021121 116 PTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEI 195 (317)
Q Consensus 116 ~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v 195 (317)
.. ..+.-. ||.|+.|-......+..-......|..++.... ..+.-. ||.|+.|-......+..-......|
T Consensus 111 ~~---hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~---~~~~l~-~G~v~~wG~n~~gqlg~p~~~~~~v 182 (282)
T 3qhy_B 111 AW---ASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVY---TALAVK-NGGVIAWGDNYFGQTTVPAEAQSGV 182 (282)
T ss_dssp TT---EEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSS---EEEEEE-TTEEEEEECCTTSTTSCCGGGGSSE
T ss_pred CC---EEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccC---EEEEEE-CCEEEEecCCCCCCCCCceecCCCe
Confidence 43 344445 899999976543222211123345777766533 222334 7999999866543332211223457
Q ss_pred EEEEecCCCCcEEEEEecCCcEEEEEccCCCccEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccceeee
Q 021121 196 LACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGR 275 (317)
Q Consensus 196 ~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~ 275 (317)
..++... ...++. .||.++.|-.....+.- .-......|..++-.... .++. . ||.+..|-.....++ ..
T Consensus 183 ~~i~~G~--~hs~al--~~G~v~~wG~n~~gqlg-~p~~~~~~v~~i~~G~~h--~~al-~-~g~v~~wG~n~~gq~-~v 252 (282)
T 3qhy_B 183 DDVAGGI--FHSLAL--KDGKVIAWGDNRYKQTT-VPTEALSGVSAIASGEWY--SLAL-K-NGKVIAWGSSRTAPS-SV 252 (282)
T ss_dssp EEEEECS--SEEEEE--ETTEEEEEECCTTSTTC-CCGGGGSSCCEEEECSSC--EEEE-E-TTEEEEESTTCCCCG-GG
T ss_pred EEEEecC--CEEEEE--ECCeEEEEECCCCCCCC-CCcccCCCceEEEcCCCE--EEEE-E-CCEEEEecCCCCccc-cC
Confidence 7777653 334444 59999999765543211 111112356677665433 2333 3 999999976554322 11
Q ss_pred eecccceeEeEEEEe
Q 021121 276 YDHHTEFAVGVDMSV 290 (317)
Q Consensus 276 ~~~~~~~v~~~~~~~ 290 (317)
...|..++...
T Consensus 253 ----~~~v~~iaaG~ 263 (282)
T 3qhy_B 253 ----QSGVSSIEAGP 263 (282)
T ss_dssp ----SSCEEEEEECS
T ss_pred ----CCCcEEEEECc
Confidence 23466666554
No 357
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=92.20 E-value=5.3 Score=34.53 Aligned_cols=73 Identities=11% Similarity=0.029 Sum_probs=53.2
Q ss_pred ceeEEEecCCCCeeEEeeecCCeEEEEecccccc------------eeeeeecccceeEeEEEEeccCCeEEEeecCCcE
Q 021121 238 AVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDA------------LVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELV 305 (317)
Q Consensus 238 ~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~------------~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i 305 (317)
....+..+|+|++++++|-.+.++.++|++.-.. +....+ -.......+|.++ +....|---|..|
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~-G~aYTtlfidSqv 401 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGR-GNAYTTLFIDSQV 401 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSS-SEEEEEETTTTEE
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCC-CceEeeeeecceE
Confidence 3467899999998888888999999999885321 122222 2334667899997 5556666689999
Q ss_pred EEEecCC
Q 021121 306 YVWQQGM 312 (317)
Q Consensus 306 ~~w~~~~ 312 (317)
.-|++..
T Consensus 402 vkWni~~ 408 (638)
T 3sbq_A 402 VKWNMEE 408 (638)
T ss_dssp EEEEHHH
T ss_pred EEEeccH
Confidence 9999864
No 358
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=91.75 E-value=6 Score=34.21 Aligned_cols=73 Identities=5% Similarity=0.016 Sum_probs=51.5
Q ss_pred cceEEEEEecCCCCeEEEEeCCCeEEEEeCCCC------Cc-------eeeeccCccceEEEEecCCCCcEEEEEecCCc
Q 021121 150 YCVYNATWNPRHSDVFCSASGDCTLRIWDVREM------GS-------TMIIPAHEFEILACDWNKYDDCLIASASVDKS 216 (317)
Q Consensus 150 ~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~------~~-------~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~ 216 (317)
.....+..+|++..+++.+-.+.++.++|++.. +. ....+ ........+|.+ +++...+---|..
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~-~G~aYTtlfidSq 400 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDG-RGNAYTTLFIDSQ 400 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECS-SSEEEEEETTTTE
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECC-CCceEeeeeecce
Confidence 446778899994445555566889999999842 11 11112 234567899999 8877777778999
Q ss_pred EEEEEccC
Q 021121 217 IKIWDVRN 224 (317)
Q Consensus 217 i~v~d~~~ 224 (317)
|.-|++..
T Consensus 401 vvkWni~~ 408 (638)
T 3sbq_A 401 VVKWNMEE 408 (638)
T ss_dssp EEEEEHHH
T ss_pred EEEEeccH
Confidence 99999975
No 359
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=82.65 E-value=18 Score=29.48 Aligned_cols=263 Identities=12% Similarity=0.130 Sum_probs=128.6
Q ss_pred CceEEEEecCCCCCc-------ceeeeeec--CCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCC-----CCc--
Q 021121 36 NGRVHVLDLSPAAPA-------LTELVAFD--TADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTA-----NPI-- 99 (317)
Q Consensus 36 ~g~i~i~~~~~~~~~-------~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~-----~~~-- 99 (317)
+|+|+.|=.+..... ........ ....+..++-. ....++-..+|.|..|-.....+. ...
T Consensus 19 ~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~i~~i~~G---~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~ 95 (389)
T 3kci_A 19 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGG---EQTLFAVTADGKLYATGYGAGGRLGIGGTESVST 95 (389)
T ss_dssp --CEEEEEECTTSTTSSCSCSEEEEEEECHHHHHTCEEEEEEE---TTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEE
T ss_pred CCeEEEeeCCCCccCCCCcCccccCCEecccccCCceEEEEeC---CCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccC
Confidence 888999977654310 00000000 11234444432 245556677899999965432110 000
Q ss_pred -eeec-cCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCc-----------eeEEeecc-ccceEEEEEecCCCCeE
Q 021121 100 -RSLH-EHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPT-----------SVRTFKEH-AYCVYNATWNPRHSDVF 165 (317)
Q Consensus 100 -~~~~-~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~-----------~~~~~~~~-~~~v~~~~~~~~~~~~l 165 (317)
..+. .....+..++.+.... ..+.-..||.|+.|-....- ....+... ...|..++.. ....
T Consensus 96 p~~v~~~~~~~~~~v~i~~G~~-h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G---~~hs 171 (389)
T 3kci_A 96 PTLLESIQHVFIKKVAVNSGGK-HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAG---GAHS 171 (389)
T ss_dssp EEECGGGTTSCEEEEEECTTCS-EEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEEC---SSEE
T ss_pred CEEcccccCCceeEEEECcCCC-eEEEEcCCCCEEEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEeC---cCeE
Confidence 0111 1122344455554444 66667789999999653210 01111111 1256666654 4455
Q ss_pred EEEeCCCeEEEEeCCCCCc-----------eeeec-cCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCc------
Q 021121 166 CSASGDCTLRIWDVREMGS-----------TMIIP-AHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRV------ 227 (317)
Q Consensus 166 ~~~~~dg~i~i~d~~~~~~-----------~~~~~-~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~------ 227 (317)
+.-..+|.|+.|-...... ...+. .....+..++... .....+.-..+|.|+.|-.....+
T Consensus 172 ~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~-g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~ 250 (389)
T 3kci_A 172 ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGS-GDAQTLCLTDDDTVWSWGDGDYGKLGRGGS 250 (389)
T ss_dssp EEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECC-SSCEEEEEETTTEEEEEECCGGGTTSSSSC
T ss_pred EEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEcC-CCcEEEEEccCCEEEEEeCCCCCCCCCCCC
Confidence 6677899999997543111 11111 1123466666543 234555567889999996543111
Q ss_pred ----cEEEEec-CCCceeEEEecCCCCeeEEeeecCCeEEEEecccccce----------eeeeec-ccceeEeEEEEec
Q 021121 228 ----PIAVLNG-HGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDAL----------VGRYDH-HTEFAVGVDMSVL 291 (317)
Q Consensus 228 ----~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~----------~~~~~~-~~~~v~~~~~~~~ 291 (317)
....+.. ....|..++.-.. ..++-..+|.|..|-......+ ...... ....|..++..
T Consensus 251 ~~~~~p~~v~~~~~~~v~~v~~G~~---hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~v~~ia~G-- 325 (389)
T 3kci_A 251 DGCKVPMKIDSLTGLGVVKVECGSQ---FSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATG-- 325 (389)
T ss_dssp CCEEEEEECGGGTTSCEEEEEEETT---EEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEEC--
T ss_pred CCccccEEecccCCCcEEEEeCCCC---EEEEEeCCCeEEEEeCCCCCCCCCCCCccccCCeEeccCCCCCEEEEEec--
Confidence 0111111 1224555555432 3444467899999965432110 011111 12345555543
Q ss_pred cCCeEEEeecCCcEEEEecCC
Q 021121 292 VEGLLASTGWDELVYVWQQGM 312 (317)
Q Consensus 292 ~~~~l~s~~~dg~i~~w~~~~ 312 (317)
....+....||.|+.|=.+.
T Consensus 326 -~~h~~al~~~G~v~~wG~n~ 345 (389)
T 3kci_A 326 -SLHCVCCTEDGEVYTWGDND 345 (389)
T ss_dssp -SSEEEEEETTCCEEEEECCT
T ss_pred -cCeEEEECCCCCEEEeeCCC
Confidence 44555567899999997654
No 360
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=79.66 E-value=22 Score=28.37 Aligned_cols=162 Identities=9% Similarity=0.034 Sum_probs=92.1
Q ss_pred cCCCCeeEEEecCC--CCCeEEEEEcCCeEEEEEeCCCCCCC----CceeeccCCcceEEEEEecCCCCEEEEEcCCCEE
Q 021121 58 DTADGVYDLAWSES--HDSLLIAAVADGSVKIYDTALPPTAN----PIRSLHEHTREVHSADYNPTRRDSFITSSWDDTV 131 (317)
Q Consensus 58 ~~~~~v~~~~~~~~--~~~~l~~~~~dg~i~v~~~~~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v 131 (317)
...+.|..+.-.++ .+.+++..+.+|.++--.+..-.... ....+.. ...+..+....... .++..+..|.+
T Consensus 92 ~~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d-~ill~T~~G~~ 169 (327)
T 3uc1_A 92 QPEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGD-DLLLVSANGQS 169 (327)
T ss_dssp CTTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTC-EEEEEETTSEE
T ss_pred CCCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCC-EEEEEECCCeE
Confidence 44566666644332 23689999999999998876421111 1112333 34455544444433 67788889999
Q ss_pred EEEEcC--CCc---------eeEEeeccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCC-------ceeeec--cC
Q 021121 132 KLWTVD--RPT---------SVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMG-------STMIIP--AH 191 (317)
Q Consensus 132 ~iwd~~--~~~---------~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-------~~~~~~--~~ 191 (317)
..+... .-. ....+. ....|.++...+. ...++..+..|.++.-.+..-. -+..+. ..
T Consensus 170 ~rf~~~~~eip~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~-~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~ 247 (327)
T 3uc1_A 170 IRFSATDEALRPMGRATSGVQGMRFN-IDDRLLSLNVVRE-GTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRR 247 (327)
T ss_dssp EEEECCTTTSCCCCTTSBCEESSCCC-TTCCEEEEEECCT-TCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTT
T ss_pred EEEECcccccCcCCcCCCCeeeecCC-CCCEEEEEEEECC-CCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCC
Confidence 888876 211 111222 2345777666654 5678889999999888764321 122222 11
Q ss_pred ccceEEEEecCCCCcEEEEEecCCcEEEEEccC
Q 021121 192 EFEILACDWNKYDDCLIASASVDKSIKIWDVRN 224 (317)
Q Consensus 192 ~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~ 224 (317)
...+..+.... ....++..+.+|.+..++...
T Consensus 248 ~d~lv~~~~~~-~~~~i~l~T~~G~~ir~~~~~ 279 (327)
T 3uc1_A 248 RGRLVGALIVD-DDSELYAVTSGGGVIRTAARQ 279 (327)
T ss_dssp TCSEEEEEEEC-TTCEEEEEEGGGCEEEEEGGG
T ss_pred CCeEEEEEEeC-CCccEEEEcCCCeEEEEehhh
Confidence 23344443333 344555566777777777654
No 361
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=78.24 E-value=45 Score=31.19 Aligned_cols=37 Identities=19% Similarity=0.196 Sum_probs=31.3
Q ss_pred ceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEe
Q 021121 108 EVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTF 145 (317)
Q Consensus 108 ~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~ 145 (317)
.+.+++..++.. ++++-+.|+++++|++.+++++.+.
T Consensus 237 ~~~~~~~~~~~~-~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYN-VLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTT-EEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCc-EEEEEECCCEEEEEECCCCCeEeee
Confidence 466777777766 8999999999999999999887765
No 362
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=75.82 E-value=46 Score=30.13 Aligned_cols=155 Identities=14% Similarity=0.071 Sum_probs=80.3
Q ss_pred CCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCCCCcee-ec----c----CCcceEEEEEecCCCCEEEEEcCC-
Q 021121 59 TADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRS-LH----E----HTREVHSADYNPTRRDSFITSSWD- 128 (317)
Q Consensus 59 ~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~-~~----~----~~~~v~~~~~~~~~~~~l~~~~~d- 128 (317)
..+.|.+|+++|.++..+.++...|.|...+ +.++....+.. .. . ....+.++++.|.....++++..+
T Consensus 19 ~~g~i~~i~~~p~~~~~~y~~~~~ggv~~S~-DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~~ 97 (763)
T 3a0f_A 19 GGGFISGLVAHPTEKDLIYARTDIGGTYRWN-AAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGDY 97 (763)
T ss_dssp BCSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECSC
T ss_pred CCCceeEEEeCCCCCCEEEEEeccCcEEEEC-CCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEeccc
Confidence 4568999999998877888888666554332 22222222221 10 0 234689999988544345443321
Q ss_pred ----CEEEEE-EcCCCceeEEeecc-------ccc--eEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeecc----
Q 021121 129 ----DTVKLW-TVDRPTSVRTFKEH-------AYC--VYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPA---- 190 (317)
Q Consensus 129 ----g~v~iw-d~~~~~~~~~~~~~-------~~~--v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---- 190 (317)
....|| ..+.++.-..+... .+. ...++++|.+...++++...+.|.. ....++.-..+..
T Consensus 98 ~~~~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~~~~l~~-S~DgG~TW~~~~~~~~~ 176 (763)
T 3a0f_A 98 VQWDPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGSRTQGLWR-STDRAQTWSRMNQLPDS 176 (763)
T ss_dssp TTTCSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEECSSSCEEE-ESSTTSSCEECTTSCCC
T ss_pred ccCCCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEeCCCcEEE-ECCCCcCccccccCccc
Confidence 112333 33334433333211 111 1468888876667777766554432 2222332222211
Q ss_pred --CccceEEEEecCCCCcEEEEEecCC
Q 021121 191 --HEFEILACDWNKYDDCLIASASVDK 215 (317)
Q Consensus 191 --~~~~v~~i~~~~~~~~~l~~~~~d~ 215 (317)
....+..+.++|.++..++.+..++
T Consensus 177 ~~~~~~~~~i~~~p~~~~~~~~~~~~~ 203 (763)
T 3a0f_A 177 STYGIGIISVIFDPKNVGTAYVASHAV 203 (763)
T ss_dssp SCTTTCEEEEEECSSSTTCEEEEESST
T ss_pred CCCccceEEEEECCCCCCEEEEEEeCC
Confidence 1134778899885555555555554
No 363
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=70.78 E-value=60 Score=29.17 Aligned_cols=240 Identities=9% Similarity=0.072 Sum_probs=120.2
Q ss_pred eeEEE-ecCCCCCeEEEEEcCC----eEEEEEeCCCCCCCCce-eec-cCCc------ceEEEEEecCCCCEEEEE----
Q 021121 63 VYDLA-WSESHDSLLIAAVADG----SVKIYDTALPPTANPIR-SLH-EHTR------EVHSADYNPTRRDSFITS---- 125 (317)
Q Consensus 63 v~~~~-~~~~~~~~l~~~~~dg----~i~v~~~~~~~~~~~~~-~~~-~~~~------~v~~~~~~~~~~~~l~~~---- 125 (317)
...+. ++|++...+++-+..| .++++|+.+++ .+. .+. .-+. ....++|..++. .+++.
T Consensus 131 ~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~---~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~-~~~~~~~~~ 206 (711)
T 4hvt_A 131 YRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKD---FVKNGFEPITNSGKLLEGKFTYPTWINKDT-IIFNLVLHK 206 (711)
T ss_dssp EEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTE---ECTTCSCCBCTTCCBCCEETCCEEEEETTE-EEECCCCST
T ss_pred EeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCC---cCCCCcccccccccccccccceeeEECCCE-EEEEeCCCC
Confidence 34455 8899876666655554 69999998762 221 111 0011 113357764433 44432
Q ss_pred ------cCCCEEEEEEcCCCc--eeEEeeccccce-EEEEEecCCCC----eEEEEeC---CCeEEEEeCCCCC-ceeee
Q 021121 126 ------SWDDTVKLWTVDRPT--SVRTFKEHAYCV-YNATWNPRHSD----VFCSASG---DCTLRIWDVREMG-STMII 188 (317)
Q Consensus 126 ------~~dg~v~iwd~~~~~--~~~~~~~~~~~v-~~~~~~~~~~~----~l~~~~~---dg~i~i~d~~~~~-~~~~~ 188 (317)
+....|+.|.+.+.. -...+......+ .....++++.. .+++.+. ...+.+.|..... ....+
T Consensus 207 ~~~~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l 286 (711)
T 4hvt_A 207 NEITSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKI 286 (711)
T ss_dssp TCBCTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEEC
T ss_pred CCcCcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEe
Confidence 123568888876652 222343333222 33445555332 3444332 2456676765321 12222
Q ss_pred ccCccceEEEEecCCCCcEEEEE----------ecCCcEEEEEccCCC------ccEEE-Ee-cCCCceeEEEecCCCCe
Q 021121 189 PAHEFEILACDWNKYDDCLIASA----------SVDKSIKIWDVRNYR------VPIAV-LN-GHGYAVRKVKFSPHRRN 250 (317)
Q Consensus 189 ~~~~~~v~~i~~~~~~~~~l~~~----------~~d~~i~v~d~~~~~------~~~~~-~~-~~~~~v~~~~~~~~~~~ 250 (317)
...... .+..+. .+.+++.. ...+.|...|+.+.. ..... +. .....+..+.+..+ .
T Consensus 287 ~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~ 361 (711)
T 4hvt_A 287 NMPSDA--TLQGSF-KEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD--R 361 (711)
T ss_dssp CSCTTC--EEEEEE-TTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS--C
T ss_pred ecCCcc--eEeeeE-CCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC--E
Confidence 212211 122333 55555532 235679999987641 11232 32 23446778888865 3
Q ss_pred eEEeeecCCe--EEEEecccccceeee-eec-ccceeEeEEEEeccCCeEEEeec---CCcEEEEecC
Q 021121 251 LLASCSYDMT--VCLWDFMVEDALVGR-YDH-HTEFAVGVDMSVLVEGLLASTGW---DELVYVWQQG 311 (317)
Q Consensus 251 ~l~~~~~d~~--i~vwd~~~~~~~~~~-~~~-~~~~v~~~~~~~~~~~~l~s~~~---dg~i~~w~~~ 311 (317)
++++...++. +.++++.+++..... +.- ..+.+.....+++++.++++.+. -+.+..+++.
T Consensus 362 l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 362 VFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp EEEEEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EEEEEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 7888888875 666776555311112 111 12345555666664556555442 3566666654
No 364
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=70.19 E-value=16 Score=34.94 Aligned_cols=38 Identities=18% Similarity=0.202 Sum_probs=30.1
Q ss_pred ceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEee
Q 021121 108 EVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFK 146 (317)
Q Consensus 108 ~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~ 146 (317)
.+.+++..++.. ++++-+.|+++++|++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~-~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYN-VLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTT-EEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCcc-EEEEEeCCCEEEEEECCCCCeEEeec
Confidence 344555566665 89999999999999999998887753
No 365
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=63.87 E-value=59 Score=26.55 Aligned_cols=136 Identities=11% Similarity=0.141 Sum_probs=77.9
Q ss_pred EEEEEEcCCC--ceeEEeec------cccceEEEEEe---cC---CCCeEE-EEeCCCeEEEEeCCCCCceeeec----c
Q 021121 130 TVKLWTVDRP--TSVRTFKE------HAYCVYNATWN---PR---HSDVFC-SASGDCTLRIWDVREMGSTMIIP----A 190 (317)
Q Consensus 130 ~v~iwd~~~~--~~~~~~~~------~~~~v~~~~~~---~~---~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~----~ 190 (317)
.|.+||+.+. +.++.+.- ....+..+++. |. +..++. +=+..+.|.++|+.+++.-+... .
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 6778888888 77777643 23467888888 21 122333 33456789999999876544331 1
Q ss_pred C--------------ccceEEEEecCCC----CcEEEEEecCCcEEEEEcc-----CC--CccEEEEecC--CCceeEEE
Q 021121 191 H--------------EFEILACDWNKYD----DCLIASASVDKSIKIWDVR-----NY--RVPIAVLNGH--GYAVRKVK 243 (317)
Q Consensus 191 ~--------------~~~v~~i~~~~~~----~~~l~~~~~d~~i~v~d~~-----~~--~~~~~~~~~~--~~~v~~~~ 243 (317)
. ...+..|+.+| + ++.|.-....+ -++|.+. +. ...++.+-.. ...-..++
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp-~~~~~~~~LYf~plss-~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~ 281 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGD-RDSEGNRPAYYLAGSA-IKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALA 281 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECC-CCTTSCCEEEEEESSC-SEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEE
T ss_pred ccCcceEECCEEeEeccCceEEEecC-CcCCCCeEEEEEECCC-CcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEE
Confidence 0 13577888888 4 45555544333 2333332 11 1112222111 12334566
Q ss_pred ec-CCCCeeEEeeecCCeEEEEeccc
Q 021121 244 FS-PHRRNLLASCSYDMTVCLWDFMV 268 (317)
Q Consensus 244 ~~-~~~~~~l~~~~~d~~i~vwd~~~ 268 (317)
.. .+|. ++++--..+.|..|+..+
T Consensus 282 ~D~~~G~-ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 282 YDPKTKV-IFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp ECTTTCE-EEEEESSSSEEEEEETTS
T ss_pred EeCCCCe-EEEEeccCCeEEEEeCCC
Confidence 75 4554 677777788999999875
No 366
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=62.51 E-value=80 Score=27.61 Aligned_cols=58 Identities=19% Similarity=0.242 Sum_probs=36.4
Q ss_pred eEEEEecCCCCcEEEEEecC------------CcEEEEEccCCCccEEEEec-CCCceeEEEecCCCCeeEEe
Q 021121 195 ILACDWNKYDDCLIASASVD------------KSIKIWDVRNYRVPIAVLNG-HGYAVRKVKFSPHRRNLLAS 254 (317)
Q Consensus 195 v~~i~~~~~~~~~l~~~~~d------------~~i~v~d~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~ 254 (317)
.-.|+|+| .+++++.-..+ ..+.+.+..+++. ...+.. ....++.++|+|+++.+++.
T Consensus 478 PDNL~fd~-~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~-~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEI-RRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECT-TCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCE-EEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECC-CCCEEEEecCCCcccccccccccceEEEEeCCCCeE-EEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 35688999 78766553322 2345555555442 333333 45789999999999975554
No 367
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=54.38 E-value=1.4e+02 Score=27.91 Aligned_cols=37 Identities=16% Similarity=0.192 Sum_probs=30.6
Q ss_pred ceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeee
Q 021121 151 CVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMII 188 (317)
Q Consensus 151 ~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 188 (317)
.+.+++..++ ..++++-+.|+++|+|++.+++++...
T Consensus 237 ~~~~~~~~~~-~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLST-YNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETT-TTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCC-CcEEEEEECCCEEEEEECCCCCeEeee
Confidence 4677777776 778899999999999999998876654
No 368
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=51.42 E-value=27 Score=31.22 Aligned_cols=37 Identities=14% Similarity=0.326 Sum_probs=28.6
Q ss_pred ceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeEEeec
Q 021121 108 EVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKE 147 (317)
Q Consensus 108 ~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~ 147 (317)
.|.++.+. .. ++++-+.|.++|+|++++++++....-
T Consensus 223 ~Is~~~~~--~~-fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLFH--ER-YLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEET--TT-EEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEeccC--Cc-EEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 35554443 44 899999999999999999988877654
No 369
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=51.06 E-value=1.2e+02 Score=26.50 Aligned_cols=60 Identities=8% Similarity=0.091 Sum_probs=39.6
Q ss_pred cceEEEEEecCCCCEEEEEcC------------CCEEEEEEcCCCceeEEeecc-ccceEEEEEecCCCCeEEEE
Q 021121 107 REVHSADYNPTRRDSFITSSW------------DDTVKLWTVDRPTSVRTFKEH-AYCVYNATWNPRHSDVFCSA 168 (317)
Q Consensus 107 ~~v~~~~~~~~~~~~l~~~~~------------dg~v~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~ 168 (317)
.....|.|.++|. +.+.... ...|..++..+++....+... ...++.++|+|+ ++.|+++
T Consensus 476 nsPDnL~fd~~G~-LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD-~ktLfV~ 548 (592)
T 4a9v_A 476 NSPDGLGFDKAGR-LWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPD-QKTLFVG 548 (592)
T ss_dssp CCEEEEEECTTCC-EEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTT-SSEEEEE
T ss_pred CCCCceEECCCCC-EEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCC-CCEEEEE
Confidence 3456799999987 5552221 226777788778766655433 357899999999 5554443
No 370
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=50.73 E-value=83 Score=24.20 Aligned_cols=161 Identities=11% Similarity=0.018 Sum_probs=91.6
Q ss_pred ecCCCCeeEEEecCC-CCCeEEEEEcCCeEEEEEeCCCC---CCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEE
Q 021121 57 FDTADGVYDLAWSES-HDSLLIAAVADGSVKIYDTALPP---TANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVK 132 (317)
Q Consensus 57 ~~~~~~v~~~~~~~~-~~~~l~~~~~dg~i~v~~~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~ 132 (317)
+...+.|..+.- ++ .+..++..+.+|.++-..+..-. .......+.. ...+..+....... .++..+..|.+.
T Consensus 64 l~~~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lke-gD~l~~~~~~~~~~-~ill~T~~G~~~ 140 (276)
T 3no0_A 64 KSREEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTE-GDEVVSIASSVDET-HILLFTKKGRVA 140 (276)
T ss_dssp SSTTCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCT-TCCEEEEEECCSSC-EEEEEETTSEEE
T ss_pred CCCCCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCC-CCEEEEEEEeCCCC-EEEEEECCCEEE
Confidence 445666777644 32 23589999999999999876431 0111112222 34555554444333 788888899998
Q ss_pred EEEcCCCc---------eeEEeeccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCC-------CceeeeccCccceE
Q 021121 133 LWTVDRPT---------SVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREM-------GSTMIIPAHEFEIL 196 (317)
Q Consensus 133 iwd~~~~~---------~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~-------~~~~~~~~~~~~v~ 196 (317)
.+....-. ....+. ....|..+...++ ...++..+..|.++...+..- +-+..+ .....+.
T Consensus 141 r~~~~eip~~gR~a~Gv~~i~L~-~~d~vv~~~~~~~-~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv 217 (276)
T 3no0_A 141 RFSVREVPPSTPGARGVQGIKLE-KNDETSGLRIWNG-EPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLV 217 (276)
T ss_dssp EEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEEEESS-CSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEE
T ss_pred EEEhhhCCCcCCCCCCEEEEccC-CCCEEEEEEEeCC-CCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEE
Confidence 88764311 111222 2345666655554 567778899999988876532 122223 2233344
Q ss_pred EEEecCCCCcEEEEEecCCcEEE--EEccC
Q 021121 197 ACDWNKYDDCLIASASVDKSIKI--WDVRN 224 (317)
Q Consensus 197 ~i~~~~~~~~~l~~~~~d~~i~v--~d~~~ 224 (317)
.+.... ....++..+.+|.+.. ++...
T Consensus 218 ~~~~~~-~~~~i~~~t~~G~~ir~~~~~~~ 246 (276)
T 3no0_A 218 DLIPIK-EEVELLITTKNGKAFYDKINQKD 246 (276)
T ss_dssp EEEEES-SEEEEEEEETTSCEEEEEEEGGG
T ss_pred EEEEeC-CCCEEEEEcCCCeEEEeeeCHHH
Confidence 433322 3445666667777777 77654
No 371
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=49.38 E-value=55 Score=28.62 Aligned_cols=65 Identities=15% Similarity=0.238 Sum_probs=37.2
Q ss_pred eeEEEEecCCCCeEEEEEecccc------cccCceEEEEecCCCCCcceeeeeecCCCCeeEEEecCCCCCeEEE
Q 021121 10 GYSVKFSPFYESRLAVATAQNFG------ILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIA 78 (317)
Q Consensus 10 v~~~~~~p~~~~~~~~~~~~~~~------~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 78 (317)
.-.|.|+| .+.|.++...... ..++..+.+.+...+ .+..+..-.....++.++|+||+..+++.
T Consensus 478 PDNL~fd~--~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g--~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDK--AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATG--EIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECT--TCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTC--CEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECC--CCCEEEEecCCCcccccccccccceEEEEeCCCC--eEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 35688999 5777777653210 011233444443333 24444444566789999999998544444
No 372
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=48.07 E-value=1.6e+02 Score=26.67 Aligned_cols=157 Identities=13% Similarity=0.044 Sum_probs=81.7
Q ss_pred cCcceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeee-e-----c----CCCCeeEEEecCCCCCe
Q 021121 6 TPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVA-F-----D----TADGVYDLAWSESHDSL 75 (317)
Q Consensus 6 ~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~-~-----~----~~~~v~~~~~~~~~~~~ 75 (317)
-...|.++.++|.+++.+.+++. .|. ||...........+.. . . ....+.++++.|..+..
T Consensus 19 ~~g~i~~i~~~p~~~~~~y~~~~-------~gg--v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~ 89 (763)
T 3a0f_A 19 GGGFISGLVAHPTEKDLIYARTD-------IGG--TYRWNAAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDR 89 (763)
T ss_dssp BCSCEEEEEECSSSTTCEEEEES-------SSC--EEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTC
T ss_pred CCCceeEEEeCCCCCCEEEEEec-------cCc--EEEECCCCCCeeECccCccccccCCCcccccceeEEEECCCCCCE
Confidence 45688999999986677777764 344 3444444333333322 1 1 23468999999854445
Q ss_pred EEEEEcC-----CeEEEEEeCC-CCCCCCceeecc---C-Ccc--eEEEEEecCCCCEEEEEcCCCEEEEEEcCCCceeE
Q 021121 76 LIAAVAD-----GSVKIYDTAL-PPTANPIRSLHE---H-TRE--VHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVR 143 (317)
Q Consensus 76 l~~~~~d-----g~i~v~~~~~-~~~~~~~~~~~~---~-~~~--v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~ 143 (317)
+.++..+ ....||.-.. ++..+.+..-.. . .+. ...++++|.....++.+...+.|. ...+.++.-.
T Consensus 90 ~~~~~g~~~~~~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~~~~l~-~S~DgG~TW~ 168 (763)
T 3a0f_A 90 LYLAQGDYVQWDPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGSRTQGLW-RSTDRAQTWS 168 (763)
T ss_dssp EEEEECSCTTTCSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEECSSSCEE-EESSTTSSCE
T ss_pred EEEEecccccCCCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEeCCCcEE-EECCCCcCcc
Confidence 5554431 1244554433 333333221000 0 111 145788876554666666554333 2233343333
Q ss_pred Eeec------cccceEEEEEecCCCCeEEEEeCCC
Q 021121 144 TFKE------HAYCVYNATWNPRHSDVFCSASGDC 172 (317)
Q Consensus 144 ~~~~------~~~~v~~~~~~~~~~~~l~~~~~dg 172 (317)
.+.. ....+..+.++|.++..++.+..++
T Consensus 169 ~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~ 203 (763)
T 3a0f_A 169 RMNQLPDSSTYGIGIISVIFDPKNVGTAYVASHAV 203 (763)
T ss_dssp ECTTSCCCSCTTTCEEEEEECSSSTTCEEEEESST
T ss_pred ccccCcccCCCccceEEEEECCCCCCEEEEEEeCC
Confidence 3221 1134778899987666666666655
No 373
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=46.58 E-value=32 Score=30.79 Aligned_cols=35 Identities=14% Similarity=0.353 Sum_probs=27.1
Q ss_pred eEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCceeeec
Q 021121 152 VYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIP 189 (317)
Q Consensus 152 v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 189 (317)
|.++.+. ..++++-+.|.++|+|++++++++....
T Consensus 224 Is~~~~~---~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 224 ISCKLFH---ERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp EEEEEET---TTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred EEEeccC---CcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 5554442 6788999999999999999987666543
No 374
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=46.45 E-value=1.1e+02 Score=24.14 Aligned_cols=120 Identities=11% Similarity=0.073 Sum_probs=71.9
Q ss_pred cCCCCeeEEEecCC--CCCeEEEEEcCCeEEEEEeCCCC----CCCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEE
Q 021121 58 DTADGVYDLAWSES--HDSLLIAAVADGSVKIYDTALPP----TANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTV 131 (317)
Q Consensus 58 ~~~~~v~~~~~~~~--~~~~l~~~~~dg~i~v~~~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v 131 (317)
...+.|..+.-.++ ....++..+..|.++...+..-. .......+.. ...+..+....... .++..+.+|.+
T Consensus 97 ~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~-~i~l~T~~G~~ 174 (312)
T 1suu_A 97 GDQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDE-KVICLSKKGSA 174 (312)
T ss_dssp CTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTC-EEEEEETTSEE
T ss_pred CCCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCC-EEEEEeCCCcE
Confidence 34455666544331 23478888999999998875321 1112222333 45566655554334 68888889999
Q ss_pred EEEEcCCC---------ceeEEeeccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCC
Q 021121 132 KLWTVDRP---------TSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVRE 181 (317)
Q Consensus 132 ~iwd~~~~---------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 181 (317)
..+....- .....+. ....+..+....+ ...+++.+..|..+..++..
T Consensus 175 ~r~~~~ev~~~gR~~~Gv~~i~L~-~~d~vv~~~~v~~-~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 175 FIFNSRDVRLTNRGTQGVCGMKLK-EGDLFVKVLSVKE-NPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp EEEEGGGSCBCCTTBCCEECCCCC-TTCCEEEEEECTT-CSEEEEEETTSEEEEEEGGG
T ss_pred EEEEHHHccccCCCCCCeEeEEeC-CCCEEEEEEEECC-CCeEEEEECCCceEEEEHHH
Confidence 99987541 1111222 2345666655544 55677888999999888753
No 375
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=45.40 E-value=1.2e+02 Score=24.66 Aligned_cols=164 Identities=10% Similarity=0.154 Sum_probs=86.5
Q ss_pred eEEEEEeCCCCCCCCceeec------cCCcceEEEEEe---cC----CCCEEEEEcCCCEEEEEEcCCCceeEEeec---
Q 021121 84 SVKIYDTALPPTANPIRSLH------EHTREVHSADYN---PT----RRDSFITSSWDDTVKLWTVDRPTSVRTFKE--- 147 (317)
Q Consensus 84 ~i~v~~~~~~~~~~~~~~~~------~~~~~v~~~~~~---~~----~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~--- 147 (317)
.|.+||+.+.. .+.++.+. ...+....+.+. |. +....++=+..+.|.++|+.+++..+.+..
T Consensus 124 kLv~~DL~t~~-~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~ 202 (381)
T 3q6k_A 124 AIVAYDLKQPN-YPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFK 202 (381)
T ss_dssp EEEEEESSSTT-CCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGS
T ss_pred eEEEEECCCCC-ceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCc
Confidence 57788887641 02222221 124567888887 22 221233444578899999998866554420
Q ss_pred -----------c----ccceEEEEEecCC---CCeEEEEeCCC-eEEEEe---CCCCC---ceeeeccCc---cceEEEE
Q 021121 148 -----------H----AYCVYNATWNPRH---SDVFCSASGDC-TLRIWD---VREMG---STMIIPAHE---FEILACD 199 (317)
Q Consensus 148 -----------~----~~~v~~~~~~~~~---~~~l~~~~~dg-~i~i~d---~~~~~---~~~~~~~~~---~~v~~i~ 199 (317)
. ...+..|+++|+. ++.|.-....+ .++--. +++.. .+..+ +.. ..-..++
T Consensus 203 pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~-G~kg~~s~~~~~~ 281 (381)
T 3q6k_A 203 AERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELL-GNRGKYNDAIALA 281 (381)
T ss_dssp CCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEE-EECCTTCCEEEEE
T ss_pred cccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEe-eecCCCCCcceEE
Confidence 0 1357788888861 33444433333 333222 12221 11111 112 2334566
Q ss_pred ecCCCCcEEEEEecCCcEEEEEccC-CC--ccEEEEe--cCCCceeEEEecCCCC
Q 021121 200 WNKYDDCLIASASVDKSIKIWDVRN-YR--VPIAVLN--GHGYAVRKVKFSPHRR 249 (317)
Q Consensus 200 ~~~~~~~~l~~~~~d~~i~v~d~~~-~~--~~~~~~~--~~~~~v~~~~~~~~~~ 249 (317)
.++.++.++++--....|..|+..+ .- .....+. ..-..+..+.+.+++.
T Consensus 282 ~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~ 336 (381)
T 3q6k_A 282 YDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGG 336 (381)
T ss_dssp ECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSC
T ss_pred EeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCe
Confidence 7543788888888889999999875 21 1122222 1223466777776665
No 376
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=44.08 E-value=1.3e+02 Score=24.61 Aligned_cols=261 Identities=11% Similarity=0.023 Sum_probs=130.1
Q ss_pred cCceEEEEecCCCCC--------cceeeeeecCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCC---------C
Q 021121 35 GNGRVHVLDLSPAAP--------ALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTA---------N 97 (317)
Q Consensus 35 ~~g~i~i~~~~~~~~--------~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~---------~ 97 (317)
.+|.|+.|=.+.... .............|..++-.. ...++-..||.|..|-.....+. .
T Consensus 41 ~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~~l~~v~~va~G~---~h~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~ 117 (423)
T 3mvd_K 41 VLGNVLVCGNGDVGQLGLGEDILERKRLSPVAGIPDAVDISAGG---MHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSE 117 (423)
T ss_dssp CCEEEEEEEECTTSTTCSCSSCCEEEEEEECCSCSSEEEEEECS---SEEEEEETTSCEEEEECCSSSTTCSCCCSTTSS
T ss_pred CCCcEEEEeCCCCCCCCCCCCCccCcCCeEccCCCCceEEeeCC---CeEEEEeCCCeEEEeECCCCcCCCCCCcCCccc
Confidence 478888887654321 011111122334566666542 45566678999999975432110 0
Q ss_pred CceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEc--CC-Cce---------eEEeeccccceEEEEEecCCCCeE
Q 021121 98 PIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTV--DR-PTS---------VRTFKEHAYCVYNATWNPRHSDVF 165 (317)
Q Consensus 98 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~--~~-~~~---------~~~~~~~~~~v~~~~~~~~~~~~l 165 (317)
...........|..++... ...+.-..||.|+.|-. .. ++. ..........|..++.. ....
T Consensus 118 ~~P~~v~~~~~i~~va~G~---~hs~al~~~G~v~~wG~~~n~~GqlG~~~~~~~~~p~~~~~~~~i~~va~G---~~hs 191 (423)
T 3mvd_K 118 SKPDLIDLPGKALCISAGD---SHSACLLEDGRVFAWGSFRDSHGNMGLTIDGNKRTPIDLMEGTVCCSIASG---ADHL 191 (423)
T ss_dssp SSCEECCCSSCEEEEEECS---SEEEEEETTSCEEEEECEECSSSEEESBTTBCEEEEEESSTTCCEEEEEEC---SSEE
T ss_pred cCCeEEcCCCCEEEEEcCc---CeEEEEeCCCeEEEEeCCCCCCCCcCcCCCCCCceeeEecCCCcEEEEecC---CCeE
Confidence 0011111234566666542 25566678999999975 22 111 00111123356666654 4455
Q ss_pred EEEeCCCeEEEEeCCCCCcee----------------------ee-ccCccceEEEEecCCCCcEEEEEecCCcEEEEEc
Q 021121 166 CSASGDCTLRIWDVREMGSTM----------------------II-PAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222 (317)
Q Consensus 166 ~~~~~dg~i~i~d~~~~~~~~----------------------~~-~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~ 222 (317)
+.-..+|.|+.|-......+- .+ ......|..++... ...++.-..++.++.|-.
T Consensus 192 ~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~v~~i~~g~--~~~~~~~~~~g~v~~wG~ 269 (423)
T 3mvd_K 192 VILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATN--YCTFMRESQTQVIWATGL 269 (423)
T ss_dssp EEEETTSCEEEEECCTTSTTSSCCTTTTTSCSTTTTTTTSSCEEECCTTCCCEEEEEEET--TEEEEEETTTCCEEEEEE
T ss_pred EEEecCCeEEEeeCCcCCccCCCcccccccccccccccccCCeEEeecCCccEEEEEECC--cEEEEEECCCCeEEEEeC
Confidence 666789999999654321110 01 11122344554432 223333357888988865
Q ss_pred cCCCc----------cEEEEecCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccc-----------eeeeeecccc
Q 021121 223 RNYRV----------PIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDA-----------LVGRYDHHTE 281 (317)
Q Consensus 223 ~~~~~----------~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~-----------~~~~~~~~~~ 281 (317)
....+ ...........|..++.-. . ..+.-..||.|..|-...... .......-..
T Consensus 270 n~~gqlg~~~~~~~~~~~p~~~~~~~v~~ia~G~--~-ht~alt~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~~l~~ 346 (423)
T 3mvd_K 270 NNFKQLAHETKGKEFALTPIKTELKDIRHIAGGQ--H-HTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTE 346 (423)
T ss_dssp CTTCTTSSCCTTCSEEEEEEEECCCSEEEEEECS--S-EEEEEETTCCEEEEECCGGGTTCSSSCCSCEEEEEECTTCCS
T ss_pred CCCCcCCCCCCCCceeeeeEEcCCCCeEEEEccc--C-eEEEEeCCCcEEEEECCCCCCCCCCCccccccCceEeccCCC
Confidence 43211 0011111123465655432 2 344556789999996533210 1111122222
Q ss_pred eeEeEEEEeccCCeEEEeecCCcEEEEecCC
Q 021121 282 FAVGVDMSVLVEGLLASTGWDELVYVWQQGM 312 (317)
Q Consensus 282 ~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~ 312 (317)
.|..|+.. ...-+.-..||.|+.|=.+.
T Consensus 347 ~v~~ia~G---~~hs~alt~~G~v~~wG~n~ 374 (423)
T 3mvd_K 347 KIVSVGCG---EVCSYAVTIDGKLYSWGSGV 374 (423)
T ss_dssp CEEEEEEE---TTEEEEEETTSCEEEEECCT
T ss_pred CEEEEEcC---CCeEEEEcCCCCEEEECCCC
Confidence 56666655 34444457899999997654
No 377
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=41.47 E-value=1.8e+02 Score=25.40 Aligned_cols=64 Identities=16% Similarity=0.170 Sum_probs=39.7
Q ss_pred ceEEEEecCCCCcEEEEEec------------CCcEEEEEccCCCccEEEEec-CCCceeEEEecCCCCeeEEeeecCC
Q 021121 194 EILACDWNKYDDCLIASASV------------DKSIKIWDVRNYRVPIAVLNG-HGYAVRKVKFSPHRRNLLASCSYDM 259 (317)
Q Consensus 194 ~v~~i~~~~~~~~~l~~~~~------------d~~i~v~d~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~d~ 259 (317)
....|.|++ ++.+.+.... ...+..++..+++. ...+.. ....++.++|+||++.++++.-.-|
T Consensus 477 sPDnL~fd~-~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel-~~fl~~P~~aEpnGiafSPD~ktLfV~vQHPG 553 (592)
T 4a9v_A 477 SPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEI-RRFMVGPIGCEVTGISFSPDQKTLFVGIQHPG 553 (592)
T ss_dssp CEEEEEECT-TCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCE-EEEEECCTTCEEEEEEECTTSSEEEEEEESTT
T ss_pred CCCceEECC-CCCEEEEeCCCcCccccccccCCceEEEEeCCCCeE-EEEEeCCCCccccCCEECCCCCEEEEEEeCCC
Confidence 356788998 7877773221 12466666655542 333332 3457899999999997666554333
No 378
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=40.67 E-value=1.4e+02 Score=24.08 Aligned_cols=226 Identities=12% Similarity=0.091 Sum_probs=106.7
Q ss_pred eEEEEEcCCeEEEEEeCCCCCCC-----Ccee---ec-cCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCC------
Q 021121 75 LLIAAVADGSVKIYDTALPPTAN-----PIRS---LH-EHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRP------ 139 (317)
Q Consensus 75 ~l~~~~~dg~i~v~~~~~~~~~~-----~~~~---~~-~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~------ 139 (317)
.++.-..||.|..|=.....+.- .... .. .....+..++.. ....+.-..||.|..|-....
T Consensus 12 ~~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~i~~i~~G---~~~~~~l~~~G~v~~wG~n~~GqLG~g 88 (389)
T 3kci_A 12 ENLYFQGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGG---EQTLFAVTADGKLYATGYGAGGRLGIG 88 (389)
T ss_dssp ---------CEEEEEECTTSTTSSCSCSEEEEEEECHHHHHTCEEEEEEE---TTEEEEEETTSCEEEEECCGGGTTSSS
T ss_pred cceeECCCCeEEEeeCCCCccCCCCcCccccCCEecccccCCceEEEEeC---CCeEEEEcCCCcEEEEECCCCCCCCCC
Confidence 45555667888888655432111 0000 00 011234444433 235666677899999964321
Q ss_pred --ce---eEEeec-cccceEEEEEecCCCCeEEEEeCCCeEEEEeCCCCCc-----------eeeecc-CccceEEEEec
Q 021121 140 --TS---VRTFKE-HAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGS-----------TMIIPA-HEFEILACDWN 201 (317)
Q Consensus 140 --~~---~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~-----------~~~~~~-~~~~v~~i~~~ 201 (317)
.. ...+.. ....+..++.+.- ....+.-..+|.|+.|-...... ...+.. ....|..++..
T Consensus 89 ~~~~~~~p~~v~~~~~~~~~~v~i~~G-~~h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G 167 (389)
T 3kci_A 89 GTESVSTPTLLESIQHVFIKKVAVNSG-GKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAG 167 (389)
T ss_dssp SSCCEEEEEECGGGTTSCEEEEEECTT-CSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEEC
T ss_pred CcCCccCCEEcccccCCceeEEEECcC-CCeEEEEcCCCCEEEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEeC
Confidence 11 111111 1223444555544 56666778899999996542111 111111 12245666543
Q ss_pred CCCCcEEEEEecCCcEEEEEccCCCc----------cEEEEe-cCCCceeEEEecCCCCeeEEeeecCCeEEEEeccccc
Q 021121 202 KYDDCLIASASVDKSIKIWDVRNYRV----------PIAVLN-GHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVED 270 (317)
Q Consensus 202 ~~~~~~l~~~~~d~~i~v~d~~~~~~----------~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~ 270 (317)
....++-..+|.|+.|-.....+ ...... .....|..++...... ..+.-..||.|..|-.....
T Consensus 168 ---~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~~-~t~~l~~~G~v~~wG~n~~G 243 (389)
T 3kci_A 168 ---GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDA-QTLCLTDDDTVWSWGDGDYG 243 (389)
T ss_dssp ---SSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECCSSC-EEEEEETTTEEEEEECCGGG
T ss_pred ---cCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEcCCCc-EEEEEccCCEEEEEeCCCCC
Confidence 34455556789999996543111 011111 1223466666543223 35556678999999644321
Q ss_pred c----------eeeeeec-ccceeEeEEEEeccCCeEEEeecCCcEEEEecC
Q 021121 271 A----------LVGRYDH-HTEFAVGVDMSVLVEGLLASTGWDELVYVWQQG 311 (317)
Q Consensus 271 ~----------~~~~~~~-~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~ 311 (317)
. ....... ....|..++.. ....+.-..||.|+.|=.+
T Consensus 244 qLG~g~~~~~~~p~~v~~~~~~~v~~v~~G---~~hs~alt~~G~v~~wG~n 292 (389)
T 3kci_A 244 KLGRGGSDGCKVPMKIDSLTGLGVVKVECG---SQFSVALTKSGAVYTWGKG 292 (389)
T ss_dssp TTSSSSCCCEEEEEECGGGTTSCEEEEEEE---TTEEEEEETTSCEEEEECC
T ss_pred CCCCCCCCCccccEEecccCCCcEEEEeCC---CCEEEEEeCCCeEEEEeCC
Confidence 1 0111111 12235666554 3455555678999999654
No 379
>1xks_A Nuclear pore complex protein NUP133; beta-propeller, helical insertions, protein transport; 2.35A {Homo sapiens} SCOP: b.69.14.1
Probab=39.69 E-value=1.7e+02 Score=24.56 Aligned_cols=60 Identities=13% Similarity=0.114 Sum_probs=29.1
Q ss_pred eEEEEEcCCeEEEEEeCCCCCCCCceeeccCC-cceEEEEEecCCCCEEEEEcCCCEEEEEEcC
Q 021121 75 LLIAAVADGSVKIYDTALPPTANPIRSLHEHT-REVHSADYNPTRRDSFITSSWDDTVKLWTVD 137 (317)
Q Consensus 75 ~l~~~~~dg~i~v~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~ 137 (317)
++++.. +|.|+.|.--..........+.-.. +.++.+.-.... -++.+...|++....++
T Consensus 111 lliVsp-tG~VryWesIs~~~~~~ei~~~L~~~E~vt~l~n~epa--GfIlaTStgrl~~lsir 171 (450)
T 1xks_A 111 VMVATR-EGSIRYWPSLAGEDTYTEAFVDSGGDKTYSFLTAVQGG--SFILSSSGSQLIRLIPE 171 (450)
T ss_dssp EEEECT-TCEEEEESCTTCTTCCEEEECC----CCEEEEEEETTT--EEEEEETTCCEEEEEEC
T ss_pred EEEEcC-CccEEEccccCCCCceEEEEecCCCCceEEEEeecCCc--eEEEEeccceEEEEEec
Confidence 444444 9999999744321111111112222 556655433322 24444446777777765
No 380
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=39.44 E-value=1.8e+02 Score=24.77 Aligned_cols=34 Identities=15% Similarity=0.292 Sum_probs=25.1
Q ss_pred eeeeecCCCCeeEEEecCCCCCeEEEEEcCCeEEE
Q 021121 53 ELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKI 87 (317)
Q Consensus 53 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v 87 (317)
++..+....+|..|.++++. ..|.+++.++.++|
T Consensus 454 ei~v~~~~~pI~~m~l~~~~-~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 454 EMTVFREPTTISAMELSTKQ-QQLYIGSTAGVAQL 487 (495)
T ss_dssp EECCSSSCCCCCEEEEETTT-TEEEEEBSSCEEEE
T ss_pred EEeecCCCCccceEEEcCCC-CEEEEEECCeEEEE
Confidence 44444456789999999986 58888888775554
No 381
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=38.81 E-value=1.5e+02 Score=23.57 Aligned_cols=166 Identities=11% Similarity=0.024 Sum_probs=90.0
Q ss_pred eecCcceeEEEEecC--CCCeEEEEEecccccccCceEEEEecCCCCCc----ceeeeeecCCCCeeEEEecCCCCCeEE
Q 021121 4 FKTPFNGYSVKFSPF--YESRLAVATAQNFGILGNGRVHVLDLSPAAPA----LTELVAFDTADGVYDLAWSESHDSLLI 77 (317)
Q Consensus 4 ~~~~~~v~~~~~~p~--~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~l~ 77 (317)
++....|.++---+. .+..++.++. .|.++.-.+..-... ...+. +...+.+..+...... ..++
T Consensus 91 l~~~e~i~~~~~~~~~~~e~~~v~~T~-------~G~iKr~~l~~~~~~~r~G~~~i~-lke~D~lv~~~~~~~~-d~il 161 (327)
T 3uc1_A 91 FQPEERIAQVIQIRGYTDAPYLVLATR-------NGLVKKSKLTDFDSNRSGGIVAVN-LRDNDELVGAVLCSAG-DDLL 161 (327)
T ss_dssp CCTTCCEEEEEEESSTTSSSEEEEEET-------TSEEEEEEGGGGCCCCSSCEESCB-CCTTCCEEEEEEECTT-CEEE
T ss_pred CCCCCEEEEEEEeccCCCCCEEEEEcC-------CCEEEEeEHHHhhccccCceEEEE-ECCCCEEEEEEEecCC-CEEE
Confidence 344455555433321 1345555554 889988887542211 11111 2234455555555444 4677
Q ss_pred EEEcCCeEEEEEeC--CCC-CC-----CCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCce-------e
Q 021121 78 AAVADGSVKIYDTA--LPP-TA-----NPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTS-------V 142 (317)
Q Consensus 78 ~~~~dg~i~v~~~~--~~~-~~-----~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~-------~ 142 (317)
..+..|.+..+... .-. .. .....+. ....|.++...+.+. .++..+..|.++.-.+..-.. +
T Consensus 162 l~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~-~ll~~T~~G~~Krt~l~e~~~~~R~~~G~ 239 (327)
T 3uc1_A 162 LVSANGQSIRFSATDEALRPMGRATSGVQGMRFN-IDDRLLSLNVVREGT-YLLVATSGGYAKRTAIEEYPVQGRGGKGV 239 (327)
T ss_dssp EEETTSEEEEEECCTTTSCCCCTTSBCEESSCCC-TTCCEEEEEECCTTC-EEEEEETTSEEEEEEGGGSCBCCTTSCCE
T ss_pred EEECCCeEEEEECcccccCcCCcCCCCeeeecCC-CCCEEEEEEEECCCC-EEEEEeCCCcEEEEEHHHccccCcCCCcE
Confidence 78889999888876 211 00 1111222 245677666655554 788889999999887653221 1
Q ss_pred E--EeeccccceEEEEEecCCCCeEEEEeCCCeEEEEeCCC
Q 021121 143 R--TFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVRE 181 (317)
Q Consensus 143 ~--~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 181 (317)
. .+....+.+..+..... ...++..+.+|.+.-++...
T Consensus 240 ~~~~l~~~~d~lv~~~~~~~-~~~i~l~T~~G~~ir~~~~~ 279 (327)
T 3uc1_A 240 LTVMYDRRRGRLVGALIVDD-DSELYAVTSGGGVIRTAARQ 279 (327)
T ss_dssp ESSCCCTTTCSEEEEEEECT-TCEEEEEEGGGCEEEEEGGG
T ss_pred EEEEecCCCCeEEEEEEeCC-CccEEEEcCCCeEEEEehhh
Confidence 1 12221334555444433 45566677788877777653
No 382
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=36.66 E-value=1.4e+02 Score=22.87 Aligned_cols=197 Identities=11% Similarity=-0.056 Sum_probs=105.5
Q ss_pred cceEEEEEecCCCCEEEEEcCCCEEEEEE---cCCCceeEEeeccccceEEEEEecC-CCCeEEEEeCCCeEEEEeCCCC
Q 021121 107 REVHSADYNPTRRDSFITSSWDDTVKLWT---VDRPTSVRTFKEHAYCVYNATWNPR-HSDVFCSASGDCTLRIWDVREM 182 (317)
Q Consensus 107 ~~v~~~~~~~~~~~~l~~~~~dg~v~iwd---~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~ 182 (317)
..+..+.-..... .++.-+.+|.++--. +........+. ....|..+.. ++ +...++..+.+|.++...+..-
T Consensus 24 D~~~~~~~~~t~~-~ll~fT~~G~v~~~~~~~lp~~~~~~ll~-~~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~ 100 (276)
T 3no0_A 24 APVVNILRVPFTE-GLFLVSNRGRVYWIAGSQALQGSKVSLKS-REEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEF 100 (276)
T ss_dssp CCEEEEEEEETTS-CEEEEETTSEEEEECSHHHHTSEECCCSS-TTCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGT
T ss_pred CeEEEEEEECCCC-EEEEEcCCCeEEEEEhhhCccCcccccCC-CCCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHh
Confidence 3444444333333 455566677776543 32221111132 3445666544 32 3578889999999999887653
Q ss_pred C------ceeeeccCccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCc--------cEEEEecCCCceeEEEecCCC
Q 021121 183 G------STMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRV--------PIAVLNGHGYAVRKVKFSPHR 248 (317)
Q Consensus 183 ~------~~~~~~~~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~--------~~~~~~~~~~~v~~~~~~~~~ 248 (317)
. ....++. ...+..+.... ....++..+..|.+..+....-.. ....+. ....|..+...+++
T Consensus 101 ~~~~~G~~~i~lke-gD~l~~~~~~~-~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~-~~d~vv~~~~~~~~ 177 (276)
T 3no0_A 101 EYKAQGMPIIKLTE-GDEVVSIASSV-DETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLE-KNDETSGLRIWNGE 177 (276)
T ss_dssp TTCSTTEECSCCCT-TCCEEEEEECC-SSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEEEESSC
T ss_pred hhhcCCeEEEecCC-CCEEEEEEEeC-CCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccC-CCCEEEEEEEeCCC
Confidence 2 1112222 33455555544 555677778899988887643221 011122 22455555544555
Q ss_pred CeeEEeeecCCeEEEEecccccc------eeeeeecccceeEeEEEEeccCCeEEEeecCCcEEE--EecCC
Q 021121 249 RNLLASCSYDMTVCLWDFMVEDA------LVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYV--WQQGM 312 (317)
Q Consensus 249 ~~~l~~~~~d~~i~vwd~~~~~~------~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~--w~~~~ 312 (317)
. .++..+..|.++...+..-.. -+..+ ...+.+..+..... +..++..+.+|.+.. ++.+.
T Consensus 178 ~-~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~~-~~~i~~~t~~G~~ir~~~~~~~ 246 (276)
T 3no0_A 178 P-YLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIKE-EVELLITTKNGKAFYDKINQKD 246 (276)
T ss_dssp S-EEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEESS-EEEEEEEETTSCEEEEEEEGGG
T ss_pred C-EEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeCC-CCEEEEEcCCCeEEEeeeCHHH
Confidence 5 477778899888887644220 11112 22334544433322 446666777888877 76543
No 383
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=34.05 E-value=1.7e+02 Score=23.07 Aligned_cols=236 Identities=6% Similarity=0.013 Sum_probs=119.9
Q ss_pred CCCCCeEEEEEcCCeEEEEEeCCCCC-CCCceeeccCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCC---------C
Q 021121 70 ESHDSLLIAAVADGSVKIYDTALPPT-ANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDR---------P 139 (317)
Q Consensus 70 ~~~~~~l~~~~~dg~i~v~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~---------~ 139 (317)
|+. .++++.+.+|.|+--.+..-.. ......+... ..+..+....... .++..+..|.++-+.... |
T Consensus 3 ~~e-~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke~-D~l~~~~~~~t~d-~ll~fT~~Gr~~~~~~~elp~~~r~a~G 79 (323)
T 1wp5_A 3 ASE-DVIVTVTKDGYVKRTSLRSYAASNGQDFAMKDT-DRLLAMLEMNTKD-VLLLFTNKGNYLYCPVHELPDIRWKDLG 79 (323)
T ss_dssp SCC-EEEEEEETTCEEEEEEHHHHHHTTTCCCCCCTT-CCEEEEEEEETTS-EEEEEETTSEEEEEEGGGSCBCCTTSCC
T ss_pred cCC-cEEEEEeCCCEEEEeEHHHhhhcCccccccCCC-CEEEEEEEECCCC-EEEEEECCCEEEEEEHHHCcCCCCCCCC
Confidence 443 4788899999999876542100 0111123332 3343333333333 677777788877665532 2
Q ss_pred ceeE---EeeccccceEEEEEecC--CCCeEEEEeCCCeEEEEeCCCCCc------ee--eeccCccceEEEEecCCCCc
Q 021121 140 TSVR---TFKEHAYCVYNATWNPR--HSDVFCSASGDCTLRIWDVREMGS------TM--IIPAHEFEILACDWNKYDDC 206 (317)
Q Consensus 140 ~~~~---~~~~~~~~v~~~~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~------~~--~~~~~~~~v~~i~~~~~~~~ 206 (317)
.++. .+. ....|.++...++ +...++..+.+|.++...+..-.. +. .+.. ...+..+.... ...
T Consensus 80 ~~i~~~i~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e-~d~lv~~~~~~-~~~ 156 (323)
T 1wp5_A 80 QHIANIIPID-RDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKN-DDQVVDVHLTD-GMN 156 (323)
T ss_dssp EEGGGTSCCC-TTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCT-TCCEEEEEEEC-SCS
T ss_pred cChhhccCCC-CCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCC-CCEEEEEEEeC-CCC
Confidence 2111 122 2234555433332 245688899999999988752211 11 2222 24444444444 445
Q ss_pred EEEEEecCCcEEEEEccCCCc------cEEEEe-cCCCceeEEEecCCCCeeEEeeecCCeEEEEeccccc---------
Q 021121 207 LIASASVDKSIKIWDVRNYRV------PIAVLN-GHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVED--------- 270 (317)
Q Consensus 207 ~l~~~~~d~~i~v~d~~~~~~------~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~--------- 270 (317)
.++..+.+|.+..+....-.. -+..+. .....|.++...+++...++..+..|..+..++..-.
T Consensus 157 ~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e~~~~~Rg~kGv 236 (323)
T 1wp5_A 157 ELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTEFEKATRAKRGV 236 (323)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGGSCCCCTTSCCE
T ss_pred EEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHHccccCCCCCCE
Confidence 677778899988888754221 111111 1233455554433333136667778888877765411
Q ss_pred ceeeeeecccceeEeEEEEeccCCeEEEeecCCcEEEEecCC
Q 021121 271 ALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGM 312 (317)
Q Consensus 271 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~~w~~~~ 312 (317)
.....+......+..+..... +..++..+..|.+...++..
T Consensus 237 ~~~~~~~~~~~~l~~~~~v~~-~~~i~~it~~g~~ir~~~~~ 277 (323)
T 1wp5_A 237 VILRELKANPHRISGFVVAQD-SDTIYLQTEKSFIETIKVGD 277 (323)
T ss_dssp ECSCCCSSSCCCEEEEEEECT-TCEEEEEETTSCEEEEEGGG
T ss_pred ECeeecCCCCceEEEEEEeCC-CCeEEEEeCCCeEEEEEhhh
Confidence 111112222223443333332 44566666777776666644
No 384
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=32.55 E-value=1.8e+02 Score=25.05 Aligned_cols=72 Identities=11% Similarity=0.159 Sum_probs=39.8
Q ss_pred ceeEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCC---cceeeeeecCCCCee-EEEecCCCCCeEEEEEcCCe
Q 021121 9 NGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAP---ALTELVAFDTADGVY-DLAWSESHDSLLIAAVADGS 84 (317)
Q Consensus 9 ~v~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~---~~~~~~~~~~~~~v~-~~~~~~~~~~~l~~~~~dg~ 84 (317)
..++++.....+..++..+.. +|+|.-..+..... ....+..+....+|. .|.++++. ..|.+++.++.
T Consensus 401 ~lT~vav~~~~~~tV~flGT~------~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~-~~Lyv~s~~~V 473 (539)
T 3al9_A 401 RLTSVASYVYNGYSVVFVGTK------SGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQ-LYLYVMSERQV 473 (539)
T ss_dssp CEEEEEEEEETTEEEEEEEET------TSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTS-SEEEEECSSEE
T ss_pred ceEEEEeeccCCeEEEEEEcC------CCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCC-CeEEEEecccc
Confidence 345555554433444444433 78775555543321 223333334466785 89999986 58888877654
Q ss_pred EEE
Q 021121 85 VKI 87 (317)
Q Consensus 85 i~v 87 (317)
++|
T Consensus 474 ~kv 476 (539)
T 3al9_A 474 TRV 476 (539)
T ss_dssp EEE
T ss_pred cee
Confidence 443
No 385
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=30.85 E-value=2.2e+02 Score=24.22 Aligned_cols=59 Identities=8% Similarity=0.138 Sum_probs=36.6
Q ss_pred CeEEEEEcCCeEEEEEeCCCCC-----CCCceeec--cCCcceEEEEEecCCCCEEEEEcCCCEEEE
Q 021121 74 SLLIAAVADGSVKIYDTALPPT-----ANPIRSLH--EHTREVHSADYNPTRRDSFITSSWDDTVKL 133 (317)
Q Consensus 74 ~~l~~~~~dg~i~v~~~~~~~~-----~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~dg~v~i 133 (317)
..+..|+.+|.|.=.-+..... ...+..+. ....+|..|.++++.. .|++++.++.++|
T Consensus 422 tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~-~Lyv~s~~~V~~v 487 (495)
T 1q47_A 422 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQ-QLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTT-EEEEEBSSCEEEE
T ss_pred EEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCC-EEEEEECCeEEEE
Confidence 3677888899876554432211 11222333 2357899999999877 8888887776654
No 386
>3kvp_A Uncharacterized protein YMZC; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.40A {Bacillus subtilis}
Probab=29.99 E-value=63 Score=18.58 Aligned_cols=21 Identities=5% Similarity=0.189 Sum_probs=14.9
Q ss_pred CceEEEEecCCCCCcceeeee
Q 021121 36 NGRVHVLDLSPAAPALTELVA 56 (317)
Q Consensus 36 ~g~i~i~~~~~~~~~~~~~~~ 56 (317)
+|.|+||.+++....+..+..
T Consensus 37 ~g~iKIykyde~tNeI~LkKE 57 (72)
T 3kvp_A 37 DGYIKIYEYNESRNEVKLKKE 57 (72)
T ss_dssp TTEEEEEEEETTTTEEEEEEE
T ss_pred CCEEEEEEeCCCCCeEEEEEe
Confidence 779999999877655554443
No 387
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=29.13 E-value=72 Score=22.81 Aligned_cols=35 Identities=11% Similarity=0.143 Sum_probs=26.7
Q ss_pred CCceeEEEecCCCCeeEEeeecCCeEEEEeccccc
Q 021121 236 GYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVED 270 (317)
Q Consensus 236 ~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~ 270 (317)
...+.++.|...+.+-+++...++++.+||..-++
T Consensus 118 ~~hllsl~f~~g~aHaia~S~~g~~~tlFDPN~GE 152 (188)
T 1ukf_A 118 RKHLLSLRFANVQGHAIACSCEGSQFKLFDPNLGE 152 (188)
T ss_dssp CEEEEEEEETTTEEEEEEEEEETTEEEEEETTTEE
T ss_pred CceEEEEEecCCCceeEEeccCCCeEEEeCCCCce
Confidence 44566677776666667777889999999988776
No 388
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=28.31 E-value=3.3e+02 Score=24.47 Aligned_cols=245 Identities=12% Similarity=0.048 Sum_probs=119.8
Q ss_pred EEE-EecCCCCeEEEEEecccccccCceEEEEecCCCCCcceeeeeecCCC------CeeEEEecCCCCCeEEEE-----
Q 021121 12 SVK-FSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTAD------GVYDLAWSESHDSLLIAA----- 79 (317)
Q Consensus 12 ~~~-~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~------~v~~~~~~~~~~~~l~~~----- 79 (317)
.+. ++|+ ..+++++.+.. ..--..++++|+.++......+. -..+. ....++|..+ +.++++.
T Consensus 133 g~~~~~~~-~~~~~~~ls~~--G~d~~~~~~~d~~t~~~~~~~~~-~~~k~~~~~~~~~~~~~W~d~-~~~~~~~~~~~~ 207 (711)
T 4hvt_A 133 GVSNCFQN-PNRYLISMSFG--GKDEMFFREWDLEKKDFVKNGFE-PITNSGKLLEGKFTYPTWINK-DTIIFNLVLHKN 207 (711)
T ss_dssp EEEECSSS-TTEEEEEEEET--TCSEEEEEEEETTTTEECTTCSC-CBCTTCCBCCEETCCEEEEET-TEEEECCCCSTT
T ss_pred ceeecCCC-CCEEEEEeCCC--CCceeEEEEEECCcCCcCCCCcc-cccccccccccccceeeEECC-CEEEEEeCCCCC
Confidence 444 7885 56666666541 00023689999987642111111 00111 1123467633 2344431
Q ss_pred -----EcCCeEEEEEeCCCCCCCCceeeccCCcce-EEEEEecCCCC----EEEEEc---CCCEEEEEEcCCC-ceeEEe
Q 021121 80 -----VADGSVKIYDTALPPTANPIRSLHEHTREV-HSADYNPTRRD----SFITSS---WDDTVKLWTVDRP-TSVRTF 145 (317)
Q Consensus 80 -----~~dg~i~v~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~----~l~~~~---~dg~v~iwd~~~~-~~~~~~ 145 (317)
+....|+.|.+-+.. .+-...+......+ .....++++.. .+++.+ ....+.+.+.... .....+
T Consensus 208 ~~~~~~~~~~v~~~~~Gt~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l 286 (711)
T 4hvt_A 208 EITSSLYPNSLYIWKRGESI-EKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKI 286 (711)
T ss_dssp CBCTTSSBCEEEEEETTSCG-GGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEEC
T ss_pred CcCcCCCCCEEEEEECCCCh-HHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEe
Confidence 112457777765431 12222343333333 23444566553 244433 2245666676532 122333
Q ss_pred eccccceEEEEEecCCCCeEEEE----------eCCCeEEEEeCCCCC-------ceee-e-ccCccceEEEEecCCCCc
Q 021121 146 KEHAYCVYNATWNPRHSDVFCSA----------SGDCTLRIWDVREMG-------STMI-I-PAHEFEILACDWNKYDDC 206 (317)
Q Consensus 146 ~~~~~~v~~~~~~~~~~~~l~~~----------~~dg~i~i~d~~~~~-------~~~~-~-~~~~~~v~~i~~~~~~~~ 206 (317)
...... .+..+.. +.+++.. ...+.|...|+.+.. .... + ......+..+.+.. + .
T Consensus 287 ~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~-~ 361 (711)
T 4hvt_A 287 NMPSDA--TLQGSFK-EYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTK-D-R 361 (711)
T ss_dssp CSCTTC--EEEEEET-TEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECS-S-C
T ss_pred ecCCcc--eEeeeEC-CEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEEC-C-E
Confidence 222221 1223333 4444422 246779999987642 2222 2 22344677888886 4 5
Q ss_pred EEEEEecCCc--EEEEEccCCCccEEE-Ee-cCCCceeEEEecCCCCeeEEeeec---CCeEEEEecc
Q 021121 207 LIASASVDKS--IKIWDVRNYRVPIAV-LN-GHGYAVRKVKFSPHRRNLLASCSY---DMTVCLWDFM 267 (317)
Q Consensus 207 ~l~~~~~d~~--i~v~d~~~~~~~~~~-~~-~~~~~v~~~~~~~~~~~~l~~~~~---d~~i~vwd~~ 267 (317)
++++...++. +.++|+.++...... +. ...+.+.....++++..++++.+. -+.+..+|+.
T Consensus 362 l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 362 VFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp EEEEEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EEEEEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 7777777764 677777654311222 21 112456667777777766665543 3567778876
No 389
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=25.68 E-value=2.1e+02 Score=25.40 Aligned_cols=56 Identities=5% Similarity=-0.045 Sum_probs=35.1
Q ss_pred eEEeeecCCeEE-EEecccccceeeeee--cccceeEeEEEEeccC--CeEEEeecCCcEEE
Q 021121 251 LLASCSYDMTVC-LWDFMVEDALVGRYD--HHTEFAVGVDMSVLVE--GLLASTGWDELVYV 307 (317)
Q Consensus 251 ~l~~~~~d~~i~-vwd~~~~~~~~~~~~--~~~~~v~~~~~~~~~~--~~l~s~~~dg~i~~ 307 (317)
++..|..+|.|. +.........+.... ....+|..|.++++ . ..|+.++.++.+++
T Consensus 417 V~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~-~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 417 VMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSK-KGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp EEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCS-SSSCEEEEECSSCEEEE
T ss_pred EEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccC-CCccEEEEEEcCeEEEE
Confidence 677788888764 333333222222222 23568889999987 5 78888887776654
No 390
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=25.32 E-value=2.7e+02 Score=24.02 Aligned_cols=68 Identities=6% Similarity=-0.138 Sum_probs=40.6
Q ss_pred eeEEEecCCCC-eeEEeeecCCeEEEEeccccc---ceeeeee--cccceeE-eEEEEeccCCeEEEeecCCcEEE
Q 021121 239 VRKVKFSPHRR-NLLASCSYDMTVCLWDFMVED---ALVGRYD--HHTEFAV-GVDMSVLVEGLLASTGWDELVYV 307 (317)
Q Consensus 239 v~~~~~~~~~~-~~l~~~~~d~~i~vwd~~~~~---~~~~~~~--~~~~~v~-~~~~~~~~~~~l~s~~~dg~i~~ 307 (317)
.++|+....+. .++..|..+|.|.=..+.... ..+..+. ....+|. .|.++++ ...|+.++.++.++|
T Consensus 402 lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~-~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 402 LTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSIN-QLYLYVMSERQVTRV 476 (539)
T ss_dssp EEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTT-SSEEEEECSSEEEEE
T ss_pred eEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccC-CCeEEEEecccccee
Confidence 45555544332 267778889987655444321 1222222 2245785 8999997 778888887776554
No 391
>3oky_B Putative uncharacterized protein; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okw_A* 3afc_A* 3al8_A*
Probab=25.13 E-value=3.4e+02 Score=23.59 Aligned_cols=69 Identities=9% Similarity=0.058 Sum_probs=41.9
Q ss_pred ceeEEEecC----CC-CeeEEeeecCCeEE-EEeccc-----c-cceeeeeec-----------ccceeEeEEEEeccCC
Q 021121 238 AVRKVKFSP----HR-RNLLASCSYDMTVC-LWDFMV-----E-DALVGRYDH-----------HTEFAVGVDMSVLVEG 294 (317)
Q Consensus 238 ~v~~~~~~~----~~-~~~l~~~~~d~~i~-vwd~~~-----~-~~~~~~~~~-----------~~~~v~~~~~~~~~~~ 294 (317)
..+.|+... ++ -.++..|+.+|.|+ +..... . ..++..+.- ...+|..|.+++. ..
T Consensus 404 ~lT~IaVd~~~g~~~~ytVlFLGTd~G~l~Kvv~~~~~~~~~~~~~~iEEi~vf~~~~~~~~~~~~~pI~~L~ls~~-~~ 482 (565)
T 3oky_B 404 RLTKIAVDNAAGPYQNHTVVFLGSEKGIILKFLARIGSSGFLNGSLFLEEMNVYNPEKCSYDGVEDKRIMGMQLDRA-SG 482 (565)
T ss_dssp CEEEEEEEEEETTTTCEEEEEEEETTSEEEEEEECC-----CCCCEEEEEEECCCHHHHCBTTBCCCCCCEEEEEGG-GT
T ss_pred ceEEEEEEEEecCCCceEEEEEECCCCeEEEEEecCCCCccccccEEEEEEEEeccccccccccCCCceEEEEEcCC-CC
Confidence 356777664 22 23677888999874 443221 1 112222211 1457889999987 67
Q ss_pred eEEEeecCCcEEE
Q 021121 295 LLASTGWDELVYV 307 (317)
Q Consensus 295 ~l~s~~~dg~i~~ 307 (317)
.|+.++.++.+++
T Consensus 483 ~LYV~s~~~V~qV 495 (565)
T 3oky_B 483 SLYVAFSTCVIKV 495 (565)
T ss_dssp EEEEECSSCEEEE
T ss_pred EEEEEecCeEEEe
Confidence 8888888887765
No 392
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=24.66 E-value=2.8e+02 Score=22.51 Aligned_cols=261 Identities=8% Similarity=0.022 Sum_probs=127.7
Q ss_pred cCceEEEEecCCCCC--------cceeeeee-cCCCCeeEEEecCCCCCeEEEEEcCCeEEEEEeCCCCCC-----CCc-
Q 021121 35 GNGRVHVLDLSPAAP--------ALTELVAF-DTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTA-----NPI- 99 (317)
Q Consensus 35 ~~g~i~i~~~~~~~~--------~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v~~~~~~~~~-----~~~- 99 (317)
.+|.|+.|-.+.... ...+.... -....|..++.... ..++....++.|..|-.....+. ...
T Consensus 33 ~~g~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~i~~va~G~~--ht~al~~~gg~v~~wG~n~~GqLG~g~~~~~~ 110 (406)
T 4d9s_A 33 SGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGAD--HTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLF 110 (406)
T ss_dssp TTTEEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEECSS--EEEEEETTTTEEEEEECCGGGTTCSSSCCCEE
T ss_pred eCCEEEEEeCCCCCCCCCCCcccCcCCEEecccCCCCEEEEEeCcc--eEEEEECCCCEEEEEcCCCCcCCCCCCCCccc
Confidence 388999998765321 01111110 12235666665533 23333333358999964322110 000
Q ss_pred --eeec-cCCcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCce-----------eEEeecc-ccceEEEEEecCCCCe
Q 021121 100 --RSLH-EHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTS-----------VRTFKEH-AYCVYNATWNPRHSDV 164 (317)
Q Consensus 100 --~~~~-~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~-----------~~~~~~~-~~~v~~~~~~~~~~~~ 164 (317)
..+. .....|..++.. ....+.-..+|.|+.|-....-. ...+... ...|..++.. ...
T Consensus 111 ~p~~v~~l~~~~i~~ia~G---~~h~~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~i~~va~G---~~h 184 (406)
T 4d9s_A 111 TPLPIKALHGIRIKQIACG---DSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAG---AEH 184 (406)
T ss_dssp EEEECGGGTTCCEEEEEEC---SSEEEEEETTSCEEEEECCTTSTTCSSSCCCEEEEEECGGGTTCCEEEEEEC---SSE
T ss_pred cceEecccCCCCEEEEEEC---hhheEEEcCCCcEEEeCCCCCccCCCCCCCCcccceEecccCCCcEEEEecC---CCe
Confidence 0011 122356666654 22566667899999997543211 1111111 2256666654 445
Q ss_pred EEEEeCCCeEEEEeCCCCCce-----------eeecc-CccceEEEEecCCCCcEEEEEecCCcEEEEEccCCCcc----
Q 021121 165 FCSASGDCTLRIWDVREMGST-----------MIIPA-HEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVP---- 228 (317)
Q Consensus 165 l~~~~~dg~i~i~d~~~~~~~-----------~~~~~-~~~~v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~---- 228 (317)
.+.-..+|.|+.|-......+ ..+.. ....+..++.. ....+.-..+|.|+.|-.....+.
T Consensus 185 s~alt~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~i~~va~G---~~ht~~l~~~G~v~~wG~n~~GqlG~g~ 261 (406)
T 4d9s_A 185 TAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACG---WRHTISVSYSGALYTYGWSKYGQLGHGD 261 (406)
T ss_dssp EEEEETTSCEEEEECCTTSTTCSSSSCCEEEEEECCCSTTCCEEEEEEC---SSEEEEEETTCCEEEEECCTTSTTCSSS
T ss_pred EEEEeCCCCEEEeeCCCCCCCCCCCCCCcCccEEecccCCceEEEEEEC---CCcEEEEcCCCCEEEeeCCCCCCCCCCC
Confidence 666678999999975432111 11111 12345555543 334444567899999965432210
Q ss_pred ------EEEEe-cCCCceeEEEecCCCCeeEEeeecCCeEEEEecccccc-----------eeeeeecccceeEeEEEEe
Q 021121 229 ------IAVLN-GHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDA-----------LVGRYDHHTEFAVGVDMSV 290 (317)
Q Consensus 229 ------~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~-----------~~~~~~~~~~~v~~~~~~~ 290 (317)
...+. .....|..++--. . ..+.-..||.|..|-.....+ +..........|..++..
T Consensus 262 ~~~~~~p~~v~~~~~~~v~~i~~G~--~-hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~va~G- 337 (406)
T 4d9s_A 262 LEDHLIPHKLEALSNSFISQISGGW--R-HTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCG- 337 (406)
T ss_dssp CCCEEEEEECGGGTTSCEEEEEECS--S-EEEEEETTSCEEEEECCTTSTTCSSSSSCEEEEEEECCGGGCCEEEEEEC-
T ss_pred CcCccccEEecccCCCCEEEEEecC--C-EEEEEcCCCeEEEeeCCCCCCCCCCCCCCCccCEEEeccCCCcEEEEEeC-
Confidence 01111 1123455555432 2 344456788899986443211 111111122346666543
Q ss_pred ccCCeEEEeecCCcEEEEecCC
Q 021121 291 LVEGLLASTGWDELVYVWQQGM 312 (317)
Q Consensus 291 ~~~~~l~s~~~dg~i~~w~~~~ 312 (317)
....++-..||.|+.|=.+.
T Consensus 338 --~~hs~alt~~G~v~~wG~n~ 357 (406)
T 4d9s_A 338 --WRHTLAVTERNNVFAWGRGT 357 (406)
T ss_dssp --SSEEEEEETTSCEEEEECCT
T ss_pred --CCeEEEEeCCCCEEEecCCC
Confidence 44555566799999997654
No 393
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=24.50 E-value=3.1e+02 Score=24.47 Aligned_cols=59 Identities=7% Similarity=0.137 Sum_probs=35.5
Q ss_pred CeEEEEEcCCeEEE-EEeCCCCCCC----Ccee--eccCCcceEEEEEecCCCCEEEEEcCCCEEEE
Q 021121 74 SLLIAAVADGSVKI-YDTALPPTAN----PIRS--LHEHTREVHSADYNPTRRDSFITSSWDDTVKL 133 (317)
Q Consensus 74 ~~l~~~~~dg~i~v-~~~~~~~~~~----~~~~--~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~i 133 (317)
..++.|+.+|.|.= .......... .+.. ......+|..|.++++.. .|++++.++.+++
T Consensus 430 tVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~-~LYV~t~~~V~kV 495 (667)
T 4gz8_A 430 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQ-QLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTT-EEEEEBSSCEEEE
T ss_pred EEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCC-EEEEEECCEEEEE
Confidence 36778889998753 3222211000 1111 123567899999999887 8888888776655
No 394
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=24.31 E-value=2.1e+02 Score=25.42 Aligned_cols=52 Identities=23% Similarity=0.348 Sum_probs=31.7
Q ss_pred CceEE-EEecCCCCCcceeeeeecCCCCeeEEEecCCC-CCeEEEEEcCCeEEE
Q 021121 36 NGRVH-VLDLSPAAPALTELVAFDTADGVYDLAWSESH-DSLLIAAVADGSVKI 87 (317)
Q Consensus 36 ~g~i~-i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~dg~i~v 87 (317)
+|+|. +.........+.++..+....+|..|.++++. ...|.+++..+.++|
T Consensus 424 ~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 424 RGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp TSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred CcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 77764 33433322233444455667889999999864 247888877765544
No 395
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=22.79 E-value=3e+02 Score=23.62 Aligned_cols=58 Identities=9% Similarity=0.127 Sum_probs=0.0
Q ss_pred eEEEEEcCCeEEEEEeCCCCCCCCceeec-cCCcceE-EEEEecCCCCEEEEEcCCCEEEE
Q 021121 75 LLIAAVADGSVKIYDTALPPTANPIRSLH-EHTREVH-SADYNPTRRDSFITSSWDDTVKL 133 (317)
Q Consensus 75 ~l~~~~~dg~i~v~~~~~~~~~~~~~~~~-~~~~~v~-~~~~~~~~~~~l~~~~~dg~v~i 133 (317)
.+..|+.+|.|.-.-+........+..+. ....+|. .+.++++.. .|+.++.++.+++
T Consensus 402 V~FlGT~~G~l~Kv~~~~~~~~~~~ee~~v~~~~pi~~~l~l~~~~~-~Lyv~s~~~V~~v 461 (528)
T 3ol2_B 402 IAFLGDSQGQLHRVYLGPGSDGHPYSTQSIQQGSAVSRDLTFDGTFE-HLYVMTQSTLLKV 461 (528)
T ss_dssp EEEEEETTSEEEEEECSSSCCSCCSEEEESSTTSCCCSCCEECTTSS-EEEEECSSCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCeeEEeeeccCCCCcceeeEEEecCCC-EEEEEeCCEEEEE
No 396
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=22.46 E-value=70 Score=22.90 Aligned_cols=36 Identities=11% Similarity=0.116 Sum_probs=25.9
Q ss_pred CcceEEEEEecCCCCEEEEEcCCCEEEEEEcCCCce
Q 021121 106 TREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTS 141 (317)
Q Consensus 106 ~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~ 141 (317)
..-+.++.|...+.+-+++...+|++.++|.+-|+.
T Consensus 118 ~~hllsl~f~~g~aHaia~S~~g~~~tlFDPN~GEF 153 (188)
T 1ukf_A 118 RKHLLSLRFANVQGHAIACSCEGSQFKLFDPNLGEF 153 (188)
T ss_dssp CEEEEEEEETTTEEEEEEEEEETTEEEEEETTTEEE
T ss_pred CceEEEEEecCCCceeEEeccCCCeEEEeCCCCcee
Confidence 445566667665555677777889999999987654
No 397
>3v4v_A Integrin alpha-4; cell adhesion, madcam-1, membrane; HET: NAG BMA MAN 0DU; 3.10A {Homo sapiens} PDB: 3v4p_A*
Probab=21.23 E-value=4.2e+02 Score=23.21 Aligned_cols=120 Identities=10% Similarity=0.121 Sum_probs=63.8
Q ss_pred eEEEEecCCCCeEEEEEecccccccCceEEEEecCCCCCcce-eee-ee----cCCCCeeEEEecCCCCCeEEEEE----
Q 021121 11 YSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALT-ELV-AF----DTADGVYDLAWSESHDSLLIAAV---- 80 (317)
Q Consensus 11 ~~~~~~p~~~~~~~~~~~~~~~~~~~g~i~i~~~~~~~~~~~-~~~-~~----~~~~~v~~~~~~~~~~~~l~~~~---- 80 (317)
++..+++ + .++++.-. ...+.|.+.+|+......... ... .. -....|....|+.|+..-+++|.
T Consensus 169 ~Sa~~~~--d-~~v~GApG--~~~w~G~v~~~~~~~~~~~~~~~~~~~~~~~sy~GySva~gD~ngDG~~DlvvGAP~~~ 243 (597)
T 3v4v_A 169 ISSFYTK--D-LIVMGAPG--SSYWTGSLFVYNITTNKYKAFLDKQNQVKFGSYLGYSVGAGHFRSQHTTEVVGGAPQHE 243 (597)
T ss_dssp SSEEECS--S-EEEEEETT--HHHHTBEEEEEETTTTBCCBBCCTTCCSCTTCCBTSSEEEECSSCTTSCEEEEEETTGG
T ss_pred eeeEecC--C-ceEEcccc--ccccccceEEEEccCceeeecccccccccccCcCccEEEEEEECCCCCeEEEEeccccc
Confidence 4566666 3 34444322 122468999999865431110 000 00 01224555557777755677764
Q ss_pred cCCeEEEEEeCCCCCCCCceeecc------CCcceEEEEEecCCCCEEEEEc-------CCCEEEEEEc
Q 021121 81 ADGSVKIYDTALPPTANPIRSLHE------HTREVHSADYNPTRRDSFITSS-------WDDTVKLWTV 136 (317)
Q Consensus 81 ~dg~i~v~~~~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~l~~~~-------~dg~v~iwd~ 136 (317)
..|.|.+|....+ .......+.+ ....+....++.||..-|++|. ..|.+.+|--
T Consensus 244 ~~G~V~v~~~~~~-~~~~~~~l~G~~~g~~fG~sva~~D~ngDG~~DlvVGap~~~~~~~~G~v~vy~~ 311 (597)
T 3v4v_A 244 QIGKAYIFSIDEK-ELNILHEMKGKKLGSYFGASVCAVDLNADGFSDLLVGAPMQSTIREEGRVFVYIN 311 (597)
T ss_dssp GTCEEEEEEECSS-SEEEEEEEECSSTTCCTTSEEEEECTTCSSSCEEEEEETTCCSSSCCCEEEEEEE
T ss_pred CCceEEEEecCCC-ceeEEEEecccccCCCCcceEEEEeeCCCCCceEEEEcccccCCCcCCeEEEEEE
Confidence 3589999986632 2222223322 1234555567777765566663 4589999853
No 398
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=20.98 E-value=5.6e+02 Score=24.57 Aligned_cols=32 Identities=16% Similarity=0.245 Sum_probs=25.6
Q ss_pred eEEEEecCCCCcEEEEEecCCcEEEEEccCCCc
Q 021121 195 ILACDWNKYDDCLIASASVDKSIKIWDVRNYRV 227 (317)
Q Consensus 195 v~~i~~~~~~~~~l~~~~~d~~i~v~d~~~~~~ 227 (317)
+.+++..+ +..++++-+.|+++|+|++.+++.
T Consensus 240 ~vs~~~~~-~~~~lftL~~D~~LRiWsl~t~~~ 271 (1139)
T 4fhn_B 240 IISMIFLS-TYNVLVMLSLDYKLKVLDLSTNQC 271 (1139)
T ss_dssp BSCCEEET-TTTEEEEEBTTCEEEEEETTTTEE
T ss_pred eEEeeccC-CccEEEEEeCCCEEEEEECCCCCe
Confidence 34455555 778999999999999999998764
Done!