Query 021126
Match_columns 317
No_of_seqs 238 out of 1457
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 13:07:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021126.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021126hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3nvs_A 3-phosphoshikimate 1-ca 100.0 5.6E-40 1.9E-44 322.7 27.6 233 76-316 24-256 (450)
2 3rmt_A 3-phosphoshikimate 1-ca 100.0 7.9E-40 2.7E-44 321.3 24.9 224 76-317 3-227 (455)
3 3slh_A 3-phosphoshikimate 1-ca 100.0 2.7E-38 9.3E-43 309.9 26.1 223 77-316 3-226 (441)
4 2pqc_A 3-phosphoshikimate 1-ca 100.0 1.9E-35 6.3E-40 290.3 28.0 223 78-316 3-229 (445)
5 1rf6_A 5-enolpyruvylshikimate- 100.0 1.8E-35 6.3E-40 288.9 26.0 219 80-316 3-222 (427)
6 2o0b_A 3-phosphoshikimate 1-ca 100.0 1.3E-34 4.5E-39 284.4 24.4 215 85-316 10-229 (450)
7 2yvw_A UDP-N-acetylglucosamine 100.0 2.9E-34 9.9E-39 280.3 23.8 220 75-316 8-228 (425)
8 4fqd_A NIKO protein; beta/alph 100.0 4E-35 1.4E-39 290.0 17.4 225 74-316 10-254 (479)
9 3r38_A UDP-N-acetylglucosamine 100.0 2.2E-32 7.6E-37 268.9 24.2 217 76-316 24-246 (454)
10 1ejd_A MURA, EPT, UDP-N-acetyl 100.0 3.1E-32 1.1E-36 265.4 24.7 221 77-317 1-222 (419)
11 3nvs_A 3-phosphoshikimate 1-ca 99.9 1.3E-24 4.4E-29 213.5 25.3 240 58-316 153-399 (450)
12 2o0b_A 3-phosphoshikimate 1-ca 99.9 1.1E-23 3.8E-28 206.8 27.0 232 57-313 128-371 (450)
13 2yvw_A UDP-N-acetylglucosamine 99.9 8.7E-23 3E-27 199.1 25.9 229 58-316 134-366 (425)
14 4fqd_A NIKO protein; beta/alph 99.9 5.5E-24 1.9E-28 210.4 17.3 237 58-316 144-397 (479)
15 3rmt_A 3-phosphoshikimate 1-ca 99.9 3.1E-23 1.1E-27 203.5 20.5 240 57-316 129-379 (455)
16 3r38_A UDP-N-acetylglucosamine 99.9 1.1E-21 3.8E-26 192.8 25.4 231 58-316 151-384 (454)
17 3slh_A 3-phosphoshikimate 1-ca 99.9 6E-22 2.1E-26 194.0 19.7 237 57-313 130-376 (441)
18 2pqc_A 3-phosphoshikimate 1-ca 99.9 2E-21 6.9E-26 190.5 22.8 238 57-313 127-379 (445)
19 1rf6_A 5-enolpyruvylshikimate- 99.9 7.9E-21 2.7E-25 185.4 21.3 237 58-316 125-373 (427)
20 1ejd_A MURA, EPT, UDP-N-acetyl 99.8 3.7E-19 1.3E-23 173.1 26.5 230 58-316 125-360 (419)
21 3tut_A RNA 3'-terminal phospha 96.1 0.077 2.6E-06 49.9 13.2 122 176-301 36-172 (358)
22 3tut_A RNA 3'-terminal phospha 95.9 0.22 7.6E-06 46.8 15.3 116 102-224 40-172 (358)
23 3pqv_A RCL1 protein; RTC-like, 94.7 0.24 8.2E-06 46.7 11.2 115 103-224 19-151 (365)
24 3pqv_A RCL1 protein; RTC-like, 93.9 0.17 6E-06 47.7 8.4 122 176-301 14-151 (365)
25 1kkl_H Phosphocarrier protein 54.9 62 0.0021 24.2 7.9 35 192-226 15-49 (100)
26 1y51_A Phosphocarrier protein 46.8 79 0.0027 22.8 7.8 34 193-226 4-37 (88)
27 4hkm_A Anthranilate phosphorib 43.6 46 0.0016 30.6 6.7 85 123-225 55-139 (346)
28 1pch_A Phosphocarrier protein; 37.3 1.2E+02 0.004 22.0 8.2 34 193-226 3-36 (88)
29 1ka5_A Phosphocarrier protein 33.4 1.3E+02 0.0046 21.6 6.8 34 193-226 4-37 (88)
30 3ccd_A Phosphocarrier protein 30.9 1.2E+02 0.0041 21.6 5.9 34 193-226 4-37 (85)
31 2elc_A Trp D, anthranilate pho 29.8 85 0.0029 28.6 6.0 148 123-296 49-209 (329)
32 1sph_A Histidine-containing ph 27.3 1.7E+02 0.0059 20.9 7.8 34 193-226 4-37 (88)
33 1ptf_A Histidine-containing ph 26.4 1.8E+02 0.0062 20.8 7.9 34 193-226 4-37 (88)
34 2gjh_A Designed protein; oblig 24.8 82 0.0028 20.6 3.5 26 127-154 21-49 (62)
35 3ihs_A Phosphocarrier protein 20.8 2.7E+02 0.0093 20.9 7.0 34 193-226 28-61 (106)
36 3r88_A Anthranilate phosphorib 20.4 1.1E+02 0.0038 28.5 4.9 85 123-225 75-160 (377)
No 1
>3nvs_A 3-phosphoshikimate 1-carboxyvinyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: S3P SKM GPJ EPE; 1.02A {Vibrio cholerae} PDB: 1g6s_A* 1g6t_A* 1x8r_A* 1x8t_A* 2aa9_A* 2aay_A* 2pq9_A* 1eps_A 1mi4_A* 3fjz_A* 3fjx_A* 2qfs_A* 2qft_A* 2qfq_A* 2qfu_A* 3fk0_A* 3fk1_A* 1q36_A* 3ti2_A* 1p88_A ...
Probab=100.00 E-value=5.6e-40 Score=322.72 Aligned_cols=233 Identities=54% Similarity=0.855 Sum_probs=206.3
Q ss_pred CceeEEEcCCCceeeEEEecCCHHHHHHHHHHHhhcCCcEEEeeCCCChhHHHHHHHHHHcCCEEEEcCCccEEEEEcCC
Q 021126 76 KASEIVLQPIREISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHMLDALKKLGLNVEEDFAMKRAIVEGCG 155 (317)
Q Consensus 76 ~~~~i~I~~~~~l~G~v~ipgskS~a~r~LlaAaLa~g~t~I~n~~~s~dv~~~l~~L~~lGa~I~~~~~~~~l~V~g~~ 155 (317)
.|+.++|+|+++++|+|++|||||+++|+|++|+|++|+++|+|++.++|+..|+++|++||++|+++++...++|+|.+
T Consensus 24 ~m~~~~i~~~~~l~G~v~vpgsKs~s~r~l~~aaLa~g~s~i~n~~~~~D~~~~~~~L~~lG~~i~~~~~~~~~~i~g~~ 103 (450)
T 3nvs_A 24 AMESLTLQPIELISGEVNLPGSKSVSNRALLLAALASGTTRLTNLLDSDDIRHMLNALTKLGVNYRLSADKTTCEVEGLG 103 (450)
T ss_dssp -CCEEEECCCCCBCEEEECCBCHHHHHHHHHHHHHSBSEEEEESCCCSHHHHHHHHHHHHTTCEEEECTTSSCEEEECCS
T ss_pred ccceEEEcCCCcceEEEEeCCcHHHHHHHHHHHHHcCCCEEEcCCCccHHHHHHHHHHHHcCCeEEEcCCccEEEEeCCC
Confidence 37889999998999999999999999999999999999999999999999999999999999999987641159999976
Q ss_pred CCcccccccCCceEEEecCchhhHHHHHHHHHHcCCCcEEEEeCCCCCCCCchHHHHHHHHhCCCeEEEeCCCCcccEEE
Q 021126 156 GLFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDGVPRMRERPIGDLVTGLKQLGADVDCILGTNCPPVRI 235 (317)
Q Consensus 156 ~~~~~~~~~~~~~~i~~g~sgta~r~l~a~la~~~~~~~~~i~G~~~l~~rpi~~l~~~L~~lGa~i~~~~~~~~~Pi~I 235 (317)
+.+..+ ....+|+|||||++||++++++. +++++.++|+++++.||++.+++.|++|||+|++.++++++|++|
T Consensus 104 ~~~~~~----~~~~l~~g~sgt~~R~l~~~la~--~~~~~~l~G~~~l~~RPi~~~l~~L~~lGa~i~~~~~~g~~p~~I 177 (450)
T 3nvs_A 104 QAFHTT----QPLELFLGNAGTAMRPLAAALCL--GQGDYVLTGEPRMKERPIGHLVDALRQAGAQIEYLEQENFPPLRI 177 (450)
T ss_dssp SCCBCS----SCEEEECTTCHHHHHHHHHHTTS--SBCEEEEECSGGGGGSCCHHHHHHHHHTTCEEEESSSTTSSCEEE
T ss_pred CCcCCC----CCceEEccCccchHHHHHHHHhc--CCcEEEEeCCcccccCCHHHHHHHHHHCCCEEEEEcCCCeEeEEE
Confidence 333322 02368999999999999998653 578999999999999999999999999999999865557899999
Q ss_pred EcCCCCCceEEEeCCCCCHHHHHHHHHHHhcCCCeEEEEEcccccccchHHHHHHHHHHcCCEEEEeCCcceEEEecCCC
Q 021126 236 NGKGGLPGGKVKLSGKLSSQYLTALLMAAPLALGNVEIEIIDKLISVPYVEMTLKLMERFGVFVEHSDSWDRFFIQGGQK 315 (317)
Q Consensus 236 ~g~~~l~g~~i~l~g~~ssq~~saLllaA~~a~G~~~I~~~~~~~s~~yv~~t~~~L~~lG~~v~~~~d~~~i~I~G~~~ 315 (317)
+|+ +++|+++.++++.|+|++++|++||++++|+++|++.++..++||+++|+++|++||++|+..+. +.|+|+|+++
T Consensus 178 ~g~-~l~gg~i~i~g~~sSq~~s~lLlAa~la~g~t~I~~~~~~~s~p~i~~t~~~L~~~Ga~i~~~g~-~~i~I~g~~~ 255 (450)
T 3nvs_A 178 QGT-GLQAGTVTIDGSISSQFLTAFLMSAPLAQGKVTIKIVGELVSKPYIDITLHIMEQFGVQVINHDY-QEFVIPAGQS 255 (450)
T ss_dssp ECC-CCCSEEEEECCSSCTHHHHHHHHHGGGSSSCEEEEESSCCSSHHHHHHHHHHHHHTTCCCEEETT-TEEEECTTCC
T ss_pred EcC-CcCceEEEeCCCCcHHHHHHHHHHHHHCCCcEEEEeCCCcCCchHHHHHHHHHHHCCCCEEecCC-cEEEEcCCcc
Confidence 997 79999999999889999999999999999999999876667889999999999999999998763 5899999876
Q ss_pred C
Q 021126 316 Y 316 (317)
Q Consensus 316 ~ 316 (317)
|
T Consensus 256 l 256 (450)
T 3nvs_A 256 Y 256 (450)
T ss_dssp C
T ss_pred c
Confidence 5
No 2
>3rmt_A 3-phosphoshikimate 1-carboxyvinyltransferase 1; structural genomics, protein structure initiative; 2.80A {Bacillus halodurans}
Probab=100.00 E-value=7.9e-40 Score=321.34 Aligned_cols=224 Identities=28% Similarity=0.415 Sum_probs=198.3
Q ss_pred CceeEEEcCCCceeeEEEecCCHHHHHHHHHHHhhcCCcEEEeeCCCChhHHHHHHHHHHcCCEEEEcCCccEEEEEcCC
Q 021126 76 KASEIVLQPIREISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHMLDALKKLGLNVEEDFAMKRAIVEGCG 155 (317)
Q Consensus 76 ~~~~i~I~~~~~l~G~v~ipgskS~a~r~LlaAaLa~g~t~I~n~~~s~dv~~~l~~L~~lGa~I~~~~~~~~l~V~g~~ 155 (317)
|++.++|+|+++++|+|++|||||.++|+|++|+|++|+++|+|++.++|+..|+++|++||++|+++++ .++|+|.+
T Consensus 3 m~~~~~i~~~~~l~G~v~vpgsKs~s~Rali~AaLa~g~s~i~n~~~~~Dv~~~~~~L~~lG~~i~~~~~--~~~i~g~~ 80 (455)
T 3rmt_A 3 MENKTVIPHAKGLKGTIKVPGDKSISHRAVMFGALAKGTTTVEGFLPGADCLSTISCFQKLGVSIEQAEE--RVTVKGKG 80 (455)
T ss_dssp -CCEEEECCCSCEEEEECCCBCHHHHHHHHHHHHHSBSCEEEESCCCSHHHHHHHHHHHTTTCEEEEETT--EEEEECCC
T ss_pred CCceEEEcCCCcceEEEEecCcHHHHHHHHHHHHhcCCCEEEccCCccHHHHHHHHHHHHcCCeEEecCC--EEEEeCCC
Confidence 4668999999999999999999999999999999999999999999999999999999999999998764 89999976
Q ss_pred C-CcccccccCCceEEEecCchhhHHHHHHHHHHcCCCcEEEEeCCCCCCCCchHHHHHHHHhCCCeEEEeCCCCcccEE
Q 021126 156 G-LFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDGVPRMRERPIGDLVTGLKQLGADVDCILGTNCPPVR 234 (317)
Q Consensus 156 ~-~~~~~~~~~~~~~i~~g~sgta~r~l~a~la~~~~~~~~~i~G~~~l~~rpi~~l~~~L~~lGa~i~~~~~~~~~Pi~ 234 (317)
. .+..| ...+|+|||||++||++++++. ..+.+.++|+++|+.||++.+++.|++|||+|+..++.+++|++
T Consensus 81 ~~~~~~~-----~~~i~~g~SGt~mRll~g~la~--~~~~~~l~G~~~l~~RPi~~~~~~L~~lGa~i~~~~~~~~~Pl~ 153 (455)
T 3rmt_A 81 WDGLREP-----SDILDVGNSGTTTRLILGILST--LPFHSVIIGDESIGKRPMKRVTEPLKSMGAQIDGRDHGNLTPLS 153 (455)
T ss_dssp GGGCCCC-----SSCEECTTCHHHHHHHHHHHTT--SSSEEEEECCTTGGGSCCHHHHHHHHHTTCEEEEHHHHTEEEEE
T ss_pred CCCcCCC-----cceeecccccccHHHHHHHHHc--CCcEEEEeCCcccccCCHHHHHHHHHHCCCEEEEecCCCcccEE
Confidence 2 33334 4579999999999999998765 45899999999999999999999999999999986533589999
Q ss_pred EEcCCCCCceEEEeCCCCCHHHHHHHHHHHhcCCCeEEEEEcccccccchHHHHHHHHHHcCCEEEEeCCcceEEEecCC
Q 021126 235 INGKGGLPGGKVKLSGKLSSQYLTALLMAAPLALGNVEIEIIDKLISVPYVEMTLKLMERFGVFVEHSDSWDRFFIQGGQ 314 (317)
Q Consensus 235 I~g~~~l~g~~i~l~g~~ssq~~saLllaA~~a~G~~~I~~~~~~~s~~yv~~t~~~L~~lG~~v~~~~d~~~i~I~G~~ 314 (317)
|+|+ +++|+++.++ ..|+|++++|||||++++|+++|. ++..++|| |+++|++||++|+..+ +.|+|+|++
T Consensus 154 i~g~-~l~g~~i~l~-~~Ssq~~s~lLlAa~~a~G~t~i~--ep~~s~~~---t~~~L~~~Ga~i~~~g--~~i~I~g~~ 224 (455)
T 3rmt_A 154 IRGG-QLKGIDFHSP-VASAQMKSAILLAGLRAEGKTSVT--EPAKTRDH---TERMLEAFGVNIEKDG--LTVSIEGGQ 224 (455)
T ss_dssp EECC-SCBCCEEECS-SCCHHHHHHHHHHHHTSBSCEEEE--CSSCCCCH---HHHHHHHTTCCEEEET--TEEEECSCC
T ss_pred EEeC-CccceEEEEc-cCcHHHHHHHHHHHHhcCCCEEEE--CCcCcHHH---HHHHHHHCCCCEEecC--CEEEEcCCc
Confidence 9996 7999999999 679999999999999999999886 34456665 7899999999999887 589999988
Q ss_pred CCC
Q 021126 315 KYK 317 (317)
Q Consensus 315 ~~~ 317 (317)
+|.
T Consensus 225 ~l~ 227 (455)
T 3rmt_A 225 MLT 227 (455)
T ss_dssp CCB
T ss_pred ccc
Confidence 763
No 3
>3slh_A 3-phosphoshikimate 1-carboxyvinyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: S3P GPJ SKM PGE 1PE PG4; 1.70A {Coxiella burnetii} PDB: 3roi_A* 4egr_A* 4gfp_A 3tr1_A
Probab=100.00 E-value=2.7e-38 Score=309.89 Aligned_cols=223 Identities=30% Similarity=0.466 Sum_probs=195.3
Q ss_pred ceeEEEcCCCceeeEEEecCCHHHHHHHHHHHhhcCCcEEEeeCCCChhHHHHHHHHHHcCCEEEEcCCccEEEEEcCC-
Q 021126 77 ASEIVLQPIREISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHMLDALKKLGLNVEEDFAMKRAIVEGCG- 155 (317)
Q Consensus 77 ~~~i~I~~~~~l~G~v~ipgskS~a~r~LlaAaLa~g~t~I~n~~~s~dv~~~l~~L~~lGa~I~~~~~~~~l~V~g~~- 155 (317)
..+++|+|+++++|+|++|||||.++|+|++|+|++|+++|+|++.++|+..|+++|++||++|+++++.+.++|+|.+
T Consensus 3 ~~~~~i~~~~~l~G~v~vpgsKs~s~r~l~~aaLa~g~s~i~n~~~~~D~~~~~~~L~~lG~~i~~~~~~~~~~i~~~~~ 82 (441)
T 3slh_A 3 AMDYQTIPSQGLSGEICVPGDKSISHRAVLLAAIAEGQTQVDGFLMGADNLAMVSALQQMGASIQVIEDENILVVEGVGM 82 (441)
T ss_dssp CEEEEECCCSCCEEEEECCBCHHHHHHHHHHHHHSBSEEEEESCCCSHHHHHHHHHHHHTTCEEEEEGGGTEEEEECCCT
T ss_pred cceEEEeCCCcceEEEEcCCcHHHHHHHHHHHHHcCCCEEEcCCCCcHHHHHHHHHHHHcCCEEEEecCCCEEEEecccc
Confidence 3458899999999999999999999999999999999999999999999999999999999999985222489999975
Q ss_pred CCcccccccCCceEEEecCchhhHHHHHHHHHHcCCCcEEEEeCCCCCCCCchHHHHHHHHhCCCeEEEeCCCCcccEEE
Q 021126 156 GLFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDGVPRMRERPIGDLVTGLKQLGADVDCILGTNCPPVRI 235 (317)
Q Consensus 156 ~~~~~~~~~~~~~~i~~g~sgta~r~l~a~la~~~~~~~~~i~G~~~l~~rpi~~l~~~L~~lGa~i~~~~~~~~~Pi~I 235 (317)
..+..| ...+|+++||+++||+++++++ ..++++++|+++++.||++.+++.|++|||+|...+ +++|++|
T Consensus 83 ~~~~~~-----~~~i~~g~sgtt~r~l~g~l~~--~~g~~~l~G~~~l~~RPi~~~~~~L~~lGa~i~~~~--g~~p~~i 153 (441)
T 3slh_A 83 TGLQAP-----PEALDCGNSGTAIRLLSGLLAG--QPFNTVLTGDSSLQRRPMKRIIDPLTLMGAKIDSTG--NVPPLKI 153 (441)
T ss_dssp TCCCCC-----SSCEECTTCHHHHHHHHHHHTT--SSSEEEEECCTTGGGSCCHHHHHHHHHTTCEEEEET--TEEEEEE
T ss_pred CCCCCC-----cceeeeccccccHHHHHHHHHh--CCCEEEEeCCcccccCCHHHHHHHHHHcCCEEEecC--CeEEEEE
Confidence 233333 4579999999999999998765 457899999999999999999999999999994333 7899999
Q ss_pred EcCCCCCceEEEeCCCCCHHHHHHHHHHHhcCCCeEEEEEcccccccchHHHHHHHHHHcCCEEEEeCCcceEEEecCCC
Q 021126 236 NGKGGLPGGKVKLSGKLSSQYLTALLMAAPLALGNVEIEIIDKLISVPYVEMTLKLMERFGVFVEHSDSWDRFFIQGGQK 315 (317)
Q Consensus 236 ~g~~~l~g~~i~l~g~~ssq~~saLllaA~~a~G~~~I~~~~~~~s~~yv~~t~~~L~~lG~~v~~~~d~~~i~I~G~~~ 315 (317)
+|.++++|++++++. +|+|++++|||||++++|+++|.. +.+|.++|+++|++||++|+..+ +.|+|+|+++
T Consensus 154 ~g~~~l~g~~i~l~~-~Ssq~~s~lLlAa~~a~g~t~i~e-----~~~~~~~t~~~L~~~Ga~i~~~~--~~i~I~g~~~ 225 (441)
T 3slh_A 154 YGNPRLTGIHYQLPM-ASAQVKSCLLLAGLYARGKTCITE-----PAPSRDHTERLLKHFHYTLQKDK--QSICVSGGGK 225 (441)
T ss_dssp ECCTTCBCCEEECSS-CCHHHHHHHHHHHTTSBSEEEEEC-----SSCCCCHHHHHHHHTTCCCEECS--SCEEEETTCC
T ss_pred EcCCCccceEEEecC-CCHHHHHHHHHHHHhcCCCeEeeC-----CcccHHHHHHHHHHCCCeEEEeC--CEEEEcCCCc
Confidence 996359999999995 899999999999999999999862 34666789999999999999876 4899999876
Q ss_pred C
Q 021126 316 Y 316 (317)
Q Consensus 316 ~ 316 (317)
|
T Consensus 226 l 226 (441)
T 3slh_A 226 L 226 (441)
T ss_dssp C
T ss_pred c
Confidence 6
No 4
>2pqc_A 3-phosphoshikimate 1-carboxyvinyltransferase; inside-OUT alpha/beta barrel; HET: RC1; 1.60A {Agrobacterium SP} PDB: 2pqb_A* 2gg6_A* 2gg4_A* 2gga_A* 2ggd_A* 2pqd_A*
Probab=100.00 E-value=1.9e-35 Score=290.27 Aligned_cols=223 Identities=24% Similarity=0.355 Sum_probs=193.2
Q ss_pred eeEEEcCCCceeeEEEecCCHHHHHHHHHHHhhcCCcEEEeeCCCChhHHHHHHHHHHcCCEEEEcCCccEEEEEcCCC-
Q 021126 78 SEIVLQPIREISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHMLDALKKLGLNVEEDFAMKRAIVEGCGG- 156 (317)
Q Consensus 78 ~~i~I~~~~~l~G~v~ipgskS~a~r~LlaAaLa~g~t~I~n~~~s~dv~~~l~~L~~lGa~I~~~~~~~~l~V~g~~~- 156 (317)
.|++|+|++++.|+|++|||||+++|+|++|+|++|+++|+|++.++|+..|+++|++||++|+++++ .++|+|.+.
T Consensus 3 ~pl~i~~~~~l~G~v~ipgsKs~t~r~ll~A~La~g~t~i~n~~~~~dv~~~~~~L~~lG~~i~~~~~--~~~I~g~~~~ 80 (445)
T 2pqc_A 3 RPATARKSSGLSGTVRIPGDKSISHRSFMFGGLASGETRITGLLEGEDVINTGKAMQAMGARIRKEGD--TWIIDGVGNG 80 (445)
T ss_dssp CCEEEECCSCCEEEEECCBCHHHHHHHHHHHHHSEEEEEEESCCCSHHHHHHHHHHHHTTCEEEEETT--EEEEEEECTT
T ss_pred ceEEEcCCCcceEEEEcCCCHHHHHHHHHHHHhcCCcEEEccCCCCHHHHHHHHHHHHCCCEEEecCC--EEEEEccCCC
Confidence 57899997789999999999999999999999999999999999999999999999999999998764 799998752
Q ss_pred CcccccccCCceEEEecCchhhHHHHHHHHHHcCCCcEEEEeCCCCCCCCchHHHHHHHHhCCCeEEEeCCCCcccEEEE
Q 021126 157 LFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDGVPRMRERPIGDLVTGLKQLGADVDCILGTNCPPVRIN 236 (317)
Q Consensus 157 ~~~~~~~~~~~~~i~~g~sgta~r~l~a~la~~~~~~~~~i~G~~~l~~rpi~~l~~~L~~lGa~i~~~~~~~~~Pi~I~ 236 (317)
.+..| ...+|+++++|++||++++++. .++++.++|+++++.||++.+++.|++|||+|++.++ +++|++|+
T Consensus 81 ~~~~p-----~~~~d~~~sgt~~r~l~~~l~~--~~~~v~l~G~~~l~~Rp~~~~l~~L~~~Ga~i~~~~~-g~~Pi~i~ 152 (445)
T 2pqc_A 81 GLLAP-----EAPLDFGNAATGCRLTMGLVGV--YDFDSTFIGDASLTKRPMGRVLNPLREMGVQVKSEDG-DRLPVTLR 152 (445)
T ss_dssp CCCCC-----SSCEECTTCHHHHHHHHHHHHT--SSSEEEEECCTTGGGSCCHHHHHHHHHTTCEEEEETT-TEEEEEEE
T ss_pred CCCCC-----CcccchhhhhHHHHHHHHHHhc--CCcEEEEECCccCCCCChHHHHHHHHHCCCEEEeccC-CcccEEEe
Confidence 23333 3468999999999999998753 3589999999999999999999999999999998753 68899999
Q ss_pred cCCCCCceEEEeCCCCCHHHHHHHHHHHhcCCCeEEEEEcccccccchHHHHHHHHHHcCCEEEEe--CC-cceEEEecC
Q 021126 237 GKGGLPGGKVKLSGKLSSQYLTALLMAAPLALGNVEIEIIDKLISVPYVEMTLKLMERFGVFVEHS--DS-WDRFFIQGG 313 (317)
Q Consensus 237 g~~~l~g~~i~l~g~~ssq~~saLllaA~~a~G~~~I~~~~~~~s~~yv~~t~~~L~~lG~~v~~~--~d-~~~i~I~G~ 313 (317)
++.+++|++++++ +.++|+.++|+++|++++|+++|++. +.+++|+. ++|++||++|+.+ +. ++.++|+|+
T Consensus 153 ~~~~l~g~~i~~~-~~ssq~~~~lllaa~~a~G~t~I~~~--~~~~~~~~---~~L~~~Ga~I~~~~~~~g~~~~~I~g~ 226 (445)
T 2pqc_A 153 GPKTPTPITYRVP-MASAQVKSAVLLAGLNTPGITTVIEP--IMTRDHTE---KMLQGFGANLTVETDADGVRTIRLEGR 226 (445)
T ss_dssp CCSSCCCCEEECS-SSCHHHHHHHHHHHHTSSSEEEEEES--SCCCCHHH---HHHHHTTCCEEEEECTTSCEEEEEETT
T ss_pred CCCCCCCeEEEeC-CCCHHHHHHHHHHHhhCCCceEEEEc--cCCHHHHH---HHHHHCCCEEEEecCCCCccEEEEeCC
Confidence 8435999999999 67899999999999999999999854 67777655 7899999999866 41 148999998
Q ss_pred CCC
Q 021126 314 QKY 316 (317)
Q Consensus 314 ~~~ 316 (317)
++|
T Consensus 227 ~~l 229 (445)
T 2pqc_A 227 GKL 229 (445)
T ss_dssp CCC
T ss_pred ccc
Confidence 765
No 5
>1rf6_A 5-enolpyruvylshikimate-3-phosphate synthase; shikimate pathway, EPSP synthase, glyphosate, PEP, transferase; HET: GPJ S3P; 1.90A {Streptococcus pneumoniae} SCOP: d.68.2.2 PDB: 1rf5_A 1rf4_A*
Probab=100.00 E-value=1.8e-35 Score=288.88 Aligned_cols=219 Identities=26% Similarity=0.429 Sum_probs=190.8
Q ss_pred EEEcCCCceeeEEEecCCHHHHHHHHHHHhhcCCcEEEeeCCCChhHHHHHHHHHHcCCEEEEcCCccEEEEEcCCC-Cc
Q 021126 80 IVLQPIREISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHMLDALKKLGLNVEEDFAMKRAIVEGCGG-LF 158 (317)
Q Consensus 80 i~I~~~~~l~G~v~ipgskS~a~r~LlaAaLa~g~t~I~n~~~s~dv~~~l~~L~~lGa~I~~~~~~~~l~V~g~~~-~~ 158 (317)
++|.+ ++++|+|++|||||+++|+|++|+|++|+++|+|++.++|+..|+++|++||++|+++++ .++|+|.+. .+
T Consensus 3 ~~i~~-~~l~G~v~ipgsKs~t~r~Llaa~La~g~t~I~n~~~s~Dv~~~~~~L~~lG~~i~~~~~--~~~I~g~~~~~~ 79 (427)
T 1rf6_A 3 LKTNI-RHLHGIIRVPGDKSISHRSIIFGSLAEGETKVYDILRGEDVLSTMQVFRDLGVEIEDKDG--VITVQGVGMAGL 79 (427)
T ss_dssp ECCCC-CCEEEEECCCBCHHHHHHHHHHHHHSBSEEEEESCCCSHHHHHHHHHHHHTTCEEEEETT--EEEEECCCSSCC
T ss_pred eEEeC-CCceEEEEcCCcHHHHHHHHHHHHHcCCCEEEccCCCCHHHHHHHHHHHHcCCeEEecCC--EEEEECCCCCCc
Confidence 56777 479999999999999999999999999999999999999999999999999999997653 799998752 23
Q ss_pred ccccccCCceEEEecCchhhHHHHHHHHHHcCCCcEEEEeCCCCCCCCchHHHHHHHHhCCCeEEEeCCCCcccEEEEcC
Q 021126 159 PLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDGVPRMRERPIGDLVTGLKQLGADVDCILGTNCPPVRINGK 238 (317)
Q Consensus 159 ~~~~~~~~~~~i~~g~sgta~r~l~a~la~~~~~~~~~i~G~~~l~~rpi~~l~~~L~~lGa~i~~~~~~~~~Pi~I~g~ 238 (317)
..| ...+|+++|+|++||++++++. .++.+.++|+++++.||++.+++.|++|||+|++.++++++|++|+++
T Consensus 80 ~~p-----~~~id~~~sgt~~rll~a~la~--~~~~v~l~G~~~l~~Rpi~~~l~~L~~mGa~i~~~~~~g~~pi~i~~~ 152 (427)
T 1rf6_A 80 KAP-----QNALNMGNSGTSIRLISGVLAG--ADFEVEMFGDDSLSKRPMDRVTLPLKKMGVSISGQTERDLPPLRLKGT 152 (427)
T ss_dssp CCC-----SSCEECTTCHHHHHHHHHHGGG--CSSEEEEECCTTGGGSCCHHHHHHHHHTTCEEEEETTTTEEEEEEECC
T ss_pred CCC-----cceeeccccchHHHHHHHHHhc--CCcEEEEeCCCccCCCCHHHHHHHHHHCCCEEEEEcCCCcceEEEecc
Confidence 333 3578999999999999988643 458999999999999999999999999999999874336789999983
Q ss_pred CCCCceEEEeCCCCCHHHHHHHHHHHhcCCCeEEEEEcccccccchHHHHHHHHHHcCCEEEEeCCcceEEEecCCCC
Q 021126 239 GGLPGGKVKLSGKLSSQYLTALLMAAPLALGNVEIEIIDKLISVPYVEMTLKLMERFGVFVEHSDSWDRFFIQGGQKY 316 (317)
Q Consensus 239 ~~l~g~~i~l~g~~ssq~~saLllaA~~a~G~~~I~~~~~~~s~~yv~~t~~~L~~lG~~v~~~~d~~~i~I~G~~~~ 316 (317)
++++|.+++++ +.|+|++++|+|+|++++|+++|... ..+++|+. ++|++||++|+..+ +.|+|+|+++|
T Consensus 153 ~~L~g~~i~~~-~~ssq~~s~lllaA~~a~G~t~I~~~--~~~~~~i~---~~L~~~Ga~i~~~~--~~i~I~g~~~l 222 (427)
T 1rf6_A 153 KNLRPIHYELP-IASAQVKSALMFAALQAKGESVIIEK--EYTRNHTE---DMLQQFGGHLSVDG--KKITVQGPQKL 222 (427)
T ss_dssp TTCCCCEEECS-SCCHHHHHHHHHHHTTSSEEEEEECS--SCCCCHHH---HHHHHTTCCCEEET--TEEEEEECCCC
T ss_pred CCCCceEEEeC-CCCHHHHHHHHHHHHhcCCCeEEEec--cCCHHHHH---HHHHHCCCCEEecC--CEEEEcCCccc
Confidence 25999999999 78999999999999999999998753 56788876 78999999999887 58999998766
No 6
>2o0b_A 3-phosphoshikimate 1-carboxyvinyltransferase; shikimate pathway, EPSP synthase, structural genomics; HET: S3P; 1.15A {Mycobacterium tuberculosis} PDB: 2o0d_A* 2o0e_A* 2o0x_A* 2o0z_A* 2o15_A 2bjb_A
Probab=100.00 E-value=1.3e-34 Score=284.41 Aligned_cols=215 Identities=33% Similarity=0.495 Sum_probs=188.4
Q ss_pred CCceeeEEEecCCHHHHHHHHHHHhhcC----CcEEEeeCCCChhHHHHHHHHHHcCCEEEEcCCccEEEEEcCCCCccc
Q 021126 85 IREISGTVTLPGSKSLSNRILLLAALSE----GTTVVDNLLSSEDIHHMLDALKKLGLNVEEDFAMKRAIVEGCGGLFPL 160 (317)
Q Consensus 85 ~~~l~G~v~ipgskS~a~r~LlaAaLa~----g~t~I~n~~~s~dv~~~l~~L~~lGa~I~~~~~~~~l~V~g~~~~~~~ 160 (317)
+++++|+|++|||||.++|+|++|+|++ |+++|+|++.++|+..++++|++||++|+++++ .++|+|.++.+.
T Consensus 10 ~~~l~G~v~vpgsKs~s~R~l~~aaLa~~~~~g~~~i~~~l~~~D~~~~~~~L~~lGa~i~~~~~--~l~I~g~~~~l~- 86 (450)
T 2o0b_A 10 PTPVRATVTVPGSKSQTNRALVLAALAAAQGRGASTISGALRSRDTELMLDALQTLGLRVDGVGS--ELTVSGRIEPGP- 86 (450)
T ss_dssp SSCCEEEECCCBCHHHHHHHHHHHHHHHHTTCCCEEEETCCCSHHHHHHHHHHHHTTCEEECSSS--CEEEESCCCCCT-
T ss_pred CCCeEEEEEccCcHHHHHHHHHHHHhcCCCCCCeEEEecCCCchHHHHHHHHHHHcCCEEEEeCC--EEEEECCCCCcC-
Confidence 3589999999999999999999999999 999999999999999999999999999987543 799998642222
Q ss_pred ccccCCceEEEecCchhhHHHHHHHHHHcCCCcEEEEeCCCCCCCCchHHHHHHHHhCCCeEEEeCCCCcccEEEEcCCC
Q 021126 161 AKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDGVPRMRERPIGDLVTGLKQLGADVDCILGTNCPPVRINGKGG 240 (317)
Q Consensus 161 ~~~~~~~~~i~~g~sgta~r~l~a~la~~~~~~~~~i~G~~~l~~rpi~~l~~~L~~lGa~i~~~~~~~~~Pi~I~g~~~ 240 (317)
...++++++++++||+.++++. .++.+.++|+++++.||++.+++.|++|||+|+. +++|++|+|+++
T Consensus 87 ------~~~i~~g~sgts~R~l~~lla~--~~~~~~l~G~~~l~~RPi~~~~~~L~~lGa~i~~----~~~p~~i~g~~~ 154 (450)
T 2o0b_A 87 ------GARVDCGLAGTVLRFVPPLAAL--GSVPVTFDGDQQARGRPIAPLLDALRELGVAVDG----TGLPFRVRGNGS 154 (450)
T ss_dssp ------TCEEECTTCHHHHHHHHHHHTT--SSSEEEEECCGGGGGSCCHHHHHHHHHTTCEEEC----SSSSEEEECCSC
T ss_pred ------ceeeeeccchhHHHHHHHHHhc--CCceEEEeCCCcCCCCCHHHHHHHHHHCCCEEEc----CceeEEEEecCC
Confidence 2478999999999999998753 6789999999999999999999999999999963 267899998437
Q ss_pred CCceEEEeCCCCCHHHHHHHHHHHhcCCCeEEEEEccc-ccccchHHHHHHHHHHcCCEEEEeCCcceEEEecCCCC
Q 021126 241 LPGGKVKLSGKLSSQYLTALLMAAPLALGNVEIEIIDK-LISVPYVEMTLKLMERFGVFVEHSDSWDRFFIQGGQKY 316 (317)
Q Consensus 241 l~g~~i~l~g~~ssq~~saLllaA~~a~G~~~I~~~~~-~~s~~yv~~t~~~L~~lG~~v~~~~d~~~i~I~G~~~~ 316 (317)
++|+++.++++.|+|++++++|||++++|+++|++.+. ..++||+++|+++|++||++|+..+ .+.|+|+| ++|
T Consensus 155 l~g~~i~i~~d~Ssq~~salllAA~~~~g~~~I~~~~~~~~s~p~i~~t~~~L~~~Ga~I~~~~-~~~i~I~g-~~l 229 (450)
T 2o0b_A 155 LAGGTVAIDASASSQFVSGLLLSAASFTDGLTVQHTGSSLPSAPHIAMTAAMLRQAGVDIDDST-PNRWQVRP-GPV 229 (450)
T ss_dssp CCCEEEEECCTTCTHHHHHHHHHGGGSTTCEEEEECSSCCCCHHHHHHHHHHHHHTTCCEECCS-TTEEEECC-CCC
T ss_pred CcCcEEEcCCCCCHHHHHHHHHHHHHcCCCeEEEeCCCCcCCCcHHHHHHHHHHHCCCeEEecC-CcEEEEEC-CCC
Confidence 99999999998999999999999999999999998643 4688999999999999999998543 25899997 455
No 7
>2yvw_A UDP-N-acetylglucosamine 1-carboxyvinyltransferase; peptidoglycan, structu genomics, NPPSFA; HET: EPU; 1.81A {Aquifex aeolicus} PDB: 3swg_A*
Probab=100.00 E-value=2.9e-34 Score=280.28 Aligned_cols=220 Identities=17% Similarity=0.211 Sum_probs=189.6
Q ss_pred CCceeEEEcCCCceeeEEEecCCHHHHHHHHHHHhhcCCcEEEeeCCCChhHHHHHHHHHHcCCEEEEcCCccEEEEEcC
Q 021126 75 SKASEIVLQPIREISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHMLDALKKLGLNVEEDFAMKRAIVEGC 154 (317)
Q Consensus 75 ~~~~~i~I~~~~~l~G~v~ipgskS~a~r~LlaAaLa~g~t~I~n~~~s~dv~~~l~~L~~lGa~I~~~~~~~~l~V~g~ 154 (317)
+.|+.+.|+|+++++|+|++|||||.++|+|++|+|++|+++|+|++.++|+..|+++|++||++|+++++ .++|+|
T Consensus 8 ~~m~~~~i~~~~~l~G~v~vpgsKs~s~r~l~~aaLa~g~~~i~n~~~~~D~~~~~~~l~~lG~~i~~~~~--~~~i~~- 84 (425)
T 2yvw_A 8 TYRDYFVIRGGKPLTGKVKISGAKNAALPIMFATILTEEPCTITNVPDLLDVRNTLLLLRELGAELEFLNN--TVFINP- 84 (425)
T ss_dssp -CCCEEEEECCCCCEEEEECCBCHHHHHHHHHHGGGCSSCEEEESCCCSHHHHHHHHHHHHTTCEEEEETT--EEEEEC-
T ss_pred CCcceEEEeCCCcceEEEEccCcHHHHHHHHHHHHhCCCCEEEecCCchHHHHHHHHHHHHCCCEEEEeCC--EEEEEC-
Confidence 34778999998899999999999999999999999999999999999999999999999999999997763 799998
Q ss_pred CC-CcccccccCCceEEEecCchhhHHHHHHHHHHcCCCcEEEEeCCCCCCCCchHHHHHHHHhCCCeEEEeCCCCcccE
Q 021126 155 GG-LFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDGVPRMRERPIGDLVTGLKQLGADVDCILGTNCPPV 233 (317)
Q Consensus 155 ~~-~~~~~~~~~~~~~i~~g~sgta~r~l~a~la~~~~~~~~~i~G~~~l~~rpi~~l~~~L~~lGa~i~~~~~~~~~Pi 233 (317)
+. .+..| ..+++++++++||+.++++.. +.+.+.++|+++|+.||++.+++.|++|||+|++.+ +++|+
T Consensus 85 ~~~~~~~p-------~~~~~~~rts~~~l~~l~a~~-~~~~~~l~G~~~l~~RPi~~~~~~L~~lGa~i~~~~--g~~~i 154 (425)
T 2yvw_A 85 SINSFITN-------QEIIRRMRASVLSLGPLLGRF-GRAVVGLPGGCSIGARPIDQHLKFFKEAGADVEVRE--GYVYV 154 (425)
T ss_dssp CCCCCEEC-------HHHHHHCGGGGGGHHHHHHHH-SEEEEECCCCBTTBCCCCHHHHHHHHHTTCEEEEET--TEEEE
T ss_pred CCCCCCCc-------hhhhcccchHHHHHHHHhccC-CcEEEEECCCcccccCCHHHHHHHHHHCCCEEEecC--CEEEE
Confidence 52 23333 125799999999999987642 346899999999999999999999999999998843 57666
Q ss_pred EEEcCCCCCceEEEeCCCCCHHHHHHHHHHHhcCCCeEEEEEcccccccchHHHHHHHHHHcCCEEEEeCCcceEEEecC
Q 021126 234 RINGKGGLPGGKVKLSGKLSSQYLTALLMAAPLALGNVEIEIIDKLISVPYVEMTLKLMERFGVFVEHSDSWDRFFIQGG 313 (317)
Q Consensus 234 ~I~g~~~l~g~~i~l~g~~ssq~~saLllaA~~a~G~~~I~~~~~~~s~~yv~~t~~~L~~lG~~v~~~~d~~~i~I~G~ 313 (317)
++ + +++|+++.++. .|+|++++++|+|++++|+++|++ +.+.+|+++|+++|++||++|+.+++ +.+ |+|+
T Consensus 155 ~~--~-~l~g~~i~~~~-~S~~~~s~lllaa~la~g~t~i~~---~~~~~~i~~t~~~L~~~Ga~i~~~~~-~~i-I~g~ 225 (425)
T 2yvw_A 155 NL--K-EKRRVHFKFDL-VTVTGTENALLYLASVPEESILEN---IALEPEVMDLIEVLKKMGAHVKVEGR-SAY-VKGS 225 (425)
T ss_dssp EC--S-SCCCCEEECSS-CCHHHHHHHHHHHTTCSSEEEEES---CCCCHHHHHHHHHHHHTTCEEEEETT-EEE-EECC
T ss_pred Ee--c-CccceEEeccc-ccHHHHHHHHHHHHhcCCCEEEeC---CCCCchHHHHHHHHHHCCCeEEEcCC-EEE-EeCC
Confidence 65 3 69999999995 799999999999999999998884 56889999999999999999997763 467 9987
Q ss_pred CCC
Q 021126 314 QKY 316 (317)
Q Consensus 314 ~~~ 316 (317)
++|
T Consensus 226 ~~l 228 (425)
T 2yvw_A 226 ENL 228 (425)
T ss_dssp SSC
T ss_pred Ccc
Confidence 655
No 8
>4fqd_A NIKO protein; beta/alpha inverse barrel, enolpyruvyl transferase, fosfomyc binding, transferase; 2.50A {Streptomyces tendae}
Probab=100.00 E-value=4e-35 Score=290.04 Aligned_cols=225 Identities=13% Similarity=0.150 Sum_probs=182.3
Q ss_pred cCCceeEEEcCCCceeeEEEecCCHHHHHHHHHHHhhcCCcEEEeeCCCChhHHHHHHHHHHcCCEEEE--cCCccEEEE
Q 021126 74 QSKASEIVLQPIREISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHMLDALKKLGLNVEE--DFAMKRAIV 151 (317)
Q Consensus 74 ~~~~~~i~I~~~~~l~G~v~ipgskS~a~r~LlaAaLa~g~t~I~n~~~s~dv~~~l~~L~~lGa~I~~--~~~~~~l~V 151 (317)
|.+++.++|+|+++++|+|++|||||.++|+|++|+|++|+++|+|++.++|+..|+++|++||++|++ ++ +.++|
T Consensus 10 ~~~~~~~~i~~~~~l~G~v~vpgsKs~s~r~l~~aaLa~g~s~i~n~~~s~D~~~~~~~l~~lG~~i~~~~~~--~~~~i 87 (479)
T 4fqd_A 10 PPGEPLLEIHGGNRLSGAVRTSGFKHSLVTTVAAAATASAPVRIENCPDIVETAVLGEIFRAAGAHAHYDGAD--ETFTV 87 (479)
T ss_dssp -CCCEEEEEECCCCBCSEEECCBCHHHHHHHHHHHTTCSSEEEEESCCCSHHHHHHHHHHHHTTCEEEEETTT--TEEEE
T ss_pred CCCCceEEEeCCCcceEEEEcCCcHHHHHHHHHHHHhcCCCEEEccCCCchhHHHHHHHHHHcCCEEEEecCC--CEEEE
Confidence 556888999999999999999999999999999999999999999999999999999999999999998 44 48999
Q ss_pred EcCCCC-cccccccCCceEEEecCchhhHHHHHHHHHHcCCCcEEEEeCCCCCC----CCchHHHHHHHHhCCCeEEEeC
Q 021126 152 EGCGGL-FPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDGVPRMR----ERPIGDLVTGLKQLGADVDCIL 226 (317)
Q Consensus 152 ~g~~~~-~~~~~~~~~~~~i~~g~sgta~r~l~a~la~~~~~~~~~i~G~~~l~----~rpi~~l~~~L~~lGa~i~~~~ 226 (317)
+|.+.. +..| . -.++++++++||+.++++. .+.+.+.++|+++|+ +||++.+++.|++|||+|++.+
T Consensus 88 ~g~~~~~~~~~------~-~~~~~~~ts~~~l~~l~a~-~~~~~~~l~G~~~l~~~~~~RPi~~~~~~L~~lGa~i~~~~ 159 (479)
T 4fqd_A 88 DASAWDRAELP------A-DLVGRIHGSLYLLPALVSR-NGVARLSASGGCPIGEGPRGRPDEHLLDVMGRFGVTTRLTA 159 (479)
T ss_dssp ECTTCCCSCCC------H-HHHTTCSGGGGGHHHHHHH-TSEEEECC------------CCCHHHHHHHHTTTCEEEECT
T ss_pred ECCCCCCCCCC------h-hHhcccchhHHHHHHHHhc-CCCeEEEEeCCcccccCCCCCChHHHHHHHHHCCCEEEecc
Confidence 987632 2222 1 1256889999999988765 344688999999999 9999999999999999999864
Q ss_pred CCCcccEEEEcCCCCCceEEEe-CCCCCHHHHHH---------HHHHHhcCCCeEEEEEcccccccchHHHHHHHHHHcC
Q 021126 227 GTNCPPVRINGKGGLPGGKVKL-SGKLSSQYLTA---------LLMAAPLALGNVEIEIIDKLISVPYVEMTLKLMERFG 296 (317)
Q Consensus 227 ~~~~~Pi~I~g~~~l~g~~i~l-~g~~ssq~~sa---------LllaA~~a~G~~~I~~~~~~~s~~yv~~t~~~L~~lG 296 (317)
++++|+++ + +++|+++++ +...||||+++ +||+|++++|+++|++ ..+++|+.+|+++|++||
T Consensus 160 -~g~~p~~~--~-~l~g~~i~l~~~sSSSQfiS~lq~v~~t~~lLlaa~la~G~t~I~~---~~~~pdi~~Tl~~L~~~G 232 (479)
T 4fqd_A 160 -DGSVDLTA--Q-RLTPCTIDMLDYTRNKALMSGPCYSGAVKTALLMGAVTHGTTTLQH---PYLKPDVTDMVTVLRDLG 232 (479)
T ss_dssp -TSCEEEEC--S-SCCCCEEEGGGGCSBTTTTBCTTHHHHHHHHHHHHHTSEEEEEEES---CCCSHHHHHHHHHHHHHT
T ss_pred -CCceEEEE--c-CccccEEEeccccchHHhhccchhHHHHHHHHHHHHhCCCcEEEec---CCCChHHHHHHHHHHHCC
Confidence 37878764 3 699999999 53334588775 8899999999999974 457899999999999999
Q ss_pred CEEEEeCCcceEEEecC---CCC
Q 021126 297 VFVEHSDSWDRFFIQGG---QKY 316 (317)
Q Consensus 297 ~~v~~~~d~~~i~I~G~---~~~ 316 (317)
++|+..++ +.|+|+|+ ++|
T Consensus 233 a~I~~~~~-~~i~I~g~g~~~~l 254 (479)
T 4fqd_A 233 ADIEFAGP-ETWVIHGRGPESLH 254 (479)
T ss_dssp CCEEEEET-TEEEEEEECGGGCC
T ss_pred CeEEEcCC-CEEEEeCCCCCCcc
Confidence 99998764 58999996 655
No 9
>3r38_A UDP-N-acetylglucosamine 1-carboxyvinyltransferase; biosynthesis and degradation of murein sacculus and peptidog infectious diseases; 2.23A {Listeria monocytogenes} PDB: 3sg1_A*
Probab=100.00 E-value=2.2e-32 Score=268.92 Aligned_cols=217 Identities=22% Similarity=0.265 Sum_probs=183.9
Q ss_pred CceeEEEcCCCceeeEEEecCCHHHHHHHHHHHhhc-CCcEEEeeCCCChhHHHHHHHHHHcCCEEEEcCCccEEEEEcC
Q 021126 76 KASEIVLQPIREISGTVTLPGSKSLSNRILLLAALS-EGTTVVDNLLSSEDIHHMLDALKKLGLNVEEDFAMKRAIVEGC 154 (317)
Q Consensus 76 ~~~~i~I~~~~~l~G~v~ipgskS~a~r~LlaAaLa-~g~t~I~n~~~s~dv~~~l~~L~~lGa~I~~~~~~~~l~V~g~ 154 (317)
.|+.++|+|+++++|+|++|||||.++++|++|+|+ +|+++|+|++.++|+..|+++|++||++|+++++ .++|+|.
T Consensus 24 ~m~~~~i~~~~~l~G~v~vpgsKs~~~~~l~aa~La~~g~s~i~n~~~~~D~~~~~~~l~~lG~~i~~~~~--~~~i~~~ 101 (454)
T 3r38_A 24 AMEKIIVRGGKQLNGSVKMEGAKNAVLPVIAATLLASKGTSVLKNVPNLSDVFTINEVLKYLNADVSFVND--EVTVDAT 101 (454)
T ss_dssp TTCEEEEECCCCCEEEEECCBCHHHHHHHHHHGGGEEESCEEEESCCCCHHHHHHHHHHHHTTCEEEEETT--EEEEECC
T ss_pred CcceEEEeCCCCceEEEEcCCCHHHHHHHHHHHHhCCCCeEEECCCCCcHHHHHHHHHHHHCCCEEEEECC--EEEEECC
Confidence 378899999999999999999999999999999999 9999999999999999999999999999998764 8999987
Q ss_pred CC-CcccccccCCceEEEecCchhhHH----HHHHHHHHcCCCcEEEEeCCCCCCCCchHHHHHHHHhCCCeEEEeCCCC
Q 021126 155 GG-LFPLAKQQTGEIELFLGNAGTAMR----PLTAAVTAAGGNLSYILDGVPRMRERPIGDLVTGLKQLGADVDCILGTN 229 (317)
Q Consensus 155 ~~-~~~~~~~~~~~~~i~~g~sgta~r----~l~a~la~~~~~~~~~i~G~~~l~~rpi~~l~~~L~~lGa~i~~~~~~~ 229 (317)
+. .+..| .+..+++| |+.++++. .+.+.+.++|+++++.||++.+++.|++|||+|+..+ +
T Consensus 102 ~~~~~~~~-----------~~~~~~~Ras~l~l~~l~a~-~~~~~~~l~G~~~l~~RPi~~~~~~L~~lGa~i~~~~--g 167 (454)
T 3r38_A 102 GEITSDAP-----------FEYVRKMRASIVVMGPLLAR-TGSARVALPGGCAIGSRPVDLHLKGFEAMGAVVKIEN--G 167 (454)
T ss_dssp SCCCCEEC-----------SHHHHHCGGGGGGHHHHHHH-HSEEEEECCCCCSSSSCCSHHHHHHHHHTTCEEEEET--T
T ss_pred CCCCCcCC-----------hhHhhccchHHHHHHHHHhC-CCCeEEEeCCCcccccCCHHHHHHHHHHCCCEEEecC--C
Confidence 52 22222 12345666 77776553 2456899999999999999999999999999999864 5
Q ss_pred cccEEEEcCCCCCceEEEeCCCCCHHHHHHHHHHHhcCCCeEEEEEcccccccchHHHHHHHHHHcCCEEEEeCCcceEE
Q 021126 230 CPPVRINGKGGLPGGKVKLSGKLSSQYLTALLMAAPLALGNVEIEIIDKLISVPYVEMTLKLMERFGVFVEHSDSWDRFF 309 (317)
Q Consensus 230 ~~Pi~I~g~~~l~g~~i~l~g~~ssq~~saLllaA~~a~G~~~I~~~~~~~s~~yv~~t~~~L~~lG~~v~~~~d~~~i~ 309 (317)
++| +++. +++|+++.++. .|+|+++++++||++++|+++|++ ..++||+..|+++|++||++|+..++ +.|.
T Consensus 168 ~~~--i~~~-~l~g~~~~l~~-~S~q~~s~lLlAa~la~G~t~I~~---~~~~p~i~~t~~~L~~~Ga~I~~~~~-~~i~ 239 (454)
T 3r38_A 168 YIE--ATAE-KLVGAKVYLDF-PSVGATQNIMMAATLAEGTTVIEN---VAREPEIVDLANFLNQMGARVIGAGT-EVIR 239 (454)
T ss_dssp EEE--EECS-SCBCCEEECSS-CCHHHHHHHHHHHTTSBSEEEEES---CCCCHHHHHHHHHHHHTTCCEECTTS-SEEE
T ss_pred EEE--EEEc-CccCcEEEecC-CCHHHHHHHHHHHhcCCCcEEEEc---CCCCcHHHHHHHHHHHCCCCEEECCC-eEEE
Confidence 644 5665 79999999995 789999999999999999999984 34678999999999999999986653 5899
Q ss_pred EecCCCC
Q 021126 310 IQGGQKY 316 (317)
Q Consensus 310 I~G~~~~ 316 (317)
|+|+++|
T Consensus 240 I~g~~~l 246 (454)
T 3r38_A 240 IEGVKEL 246 (454)
T ss_dssp EECCSCE
T ss_pred EecCccc
Confidence 9997654
No 10
>1ejd_A MURA, EPT, UDP-N-acetylglucosamine enolpyruvyltransferase; inside-OUT alpha/beta barrel; 1.55A {Enterobacter cloacae} SCOP: d.68.2.2 PDB: 1ejc_A 1eyn_A* 1ybg_A* 3kqa_A* 3lth_A* 3spb_A 3swq_A* 3upk_A* 1naw_A 1dlg_A 1ryw_A* 1q3g_A* 3su9_A* 3swi_A* 3v4t_A* 3v5v_A* 3swa_A* 1uae_A* 3kqj_A* 3kr6_A* ...
Probab=100.00 E-value=3.1e-32 Score=265.43 Aligned_cols=221 Identities=23% Similarity=0.300 Sum_probs=183.2
Q ss_pred ceeEEEcCCCceeeEEEecCCHHHHHHHHHHHhhcCCcEEEeeCCCChhHHHHHHHHHHcCCEEEEcCCccEEEEEcCCC
Q 021126 77 ASEIVLQPIREISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHMLDALKKLGLNVEEDFAMKRAIVEGCGG 156 (317)
Q Consensus 77 ~~~i~I~~~~~l~G~v~ipgskS~a~r~LlaAaLa~g~t~I~n~~~s~dv~~~l~~L~~lGa~I~~~~~~~~l~V~g~~~ 156 (317)
|+.++|+|+++++|+|++|||||+++|+|++|+|++|+++|+|++.++|+.+|+++|++||++|++++ .++|+|.+.
T Consensus 1 m~~~~i~~~~~l~G~v~i~gsks~~~r~Llaa~la~g~t~i~n~~~~~dv~~t~~~L~~lGa~i~~~~---~~~I~~~~~ 77 (419)
T 1ejd_A 1 MDKFRVQGPTRLQGEVTISGAKNAALPILFAALLAEEPVEIQNVPKLKDIDTTMKLLTQLGTKVERXG---SVWIDASNV 77 (419)
T ss_dssp CEEEEEEECCCCEEEEECCBCHHHHHHHHHHGGGBSSCEEEESCCCCHHHHHHHHHHHHTTCEEEESS---SEEEECTTC
T ss_pred CCeEEEeCCCCceEEEEecCcHHHHHHHHHHHHHCCCcEEEecCCCcHHHHHHHHHHHHCCCEEEEcc---eEEEecCCC
Confidence 46688998778999999999999999999999999999999999999999999999999999998754 688988652
Q ss_pred -CcccccccCCceEEEecCchhhHHHHHHHHHHcCCCcEEEEeCCCCCCCCchHHHHHHHHhCCCeEEEeCCCCcccEEE
Q 021126 157 -LFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDGVPRMRERPIGDLVTGLKQLGADVDCILGTNCPPVRI 235 (317)
Q Consensus 157 -~~~~~~~~~~~~~i~~g~sgta~r~l~a~la~~~~~~~~~i~G~~~l~~rpi~~l~~~L~~lGa~i~~~~~~~~~Pi~I 235 (317)
.+..| .+ +++++++++|+++++++. +++..+.++|+++++.||++.+++.|++|||+|++.+ +++|+++
T Consensus 78 ~~~~~~-----~d--~~~~~ras~~l~~alla~-~~~~~v~l~G~~~l~~rp~~~~~~~L~~mGa~i~~~~--g~~~v~~ 147 (419)
T 1ejd_A 78 NNFSAP-----YD--LVKTMRASIWALGPLVAR-FGQGQVSLPGGCAIGARPVDLHIFGLEKLGAEIKLEE--GYVKASV 147 (419)
T ss_dssp CCCEEC-----HH--HHTTCGGGGGGHHHHHHH-HSEEEEECCCCSCCSSCTTHHHHHHHHHTTCEEEEET--TEEEEEC
T ss_pred CCCcCc-----hH--HhhhhhHHHHHHHHHhhc-CCceEEEecCCcccCCCchHHHHHHHHHCCCEEEEcC--CEEEEEE
Confidence 12222 11 246666777777666542 2345788999999999999999999999999999854 5655544
Q ss_pred EcCCCCCceEEEeCCCCCHHHHHHHHHHHhcCCCeEEEEEcccccccchHHHHHHHHHHcCCEEEEeCCcceEEEecCCC
Q 021126 236 NGKGGLPGGKVKLSGKLSSQYLTALLMAAPLALGNVEIEIIDKLISVPYVEMTLKLMERFGVFVEHSDSWDRFFIQGGQK 315 (317)
Q Consensus 236 ~g~~~l~g~~i~l~g~~ssq~~saLllaA~~a~G~~~I~~~~~~~s~~yv~~t~~~L~~lG~~v~~~~d~~~i~I~G~~~ 315 (317)
.++++|.+++++. +|+|++++|+++|++++|+++|++ ..++||+++|+++|++||++|+.+++ +.++|+|+++
T Consensus 148 --~~~L~g~~i~~~~-~s~~~~~~ll~aa~~a~G~t~I~~---~~~e~~i~~t~~~L~~~Ga~i~~~~~-~~i~I~g~~~ 220 (419)
T 1ejd_A 148 --NGRLKGAHIVMDK-VSVGATVTIMSAATLAEGTTIIEN---AAREPEIVDTANFLVALGAKISGQGT-DRITIEGVER 220 (419)
T ss_dssp --SSSCBCCEEECSS-CCHHHHHHHHHHHTTSBSEEEEET---CCCCHHHHHHHHHHHHTTCEEECTTS-SEEEEECCSC
T ss_pred --cCCccceEEecCC-CCHHHHHHHHHHHhcCCCcEEEEe---CCCCchHHHHHHHHHHCCCEEEEccC-CEEEEeCCCc
Confidence 2269999999985 789999999999999999999984 34678999999999999999987653 6899999876
Q ss_pred CC
Q 021126 316 YK 317 (317)
Q Consensus 316 ~~ 317 (317)
|+
T Consensus 221 l~ 222 (419)
T 1ejd_A 221 LG 222 (419)
T ss_dssp BC
T ss_pred cc
Confidence 63
No 11
>3nvs_A 3-phosphoshikimate 1-carboxyvinyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: S3P SKM GPJ EPE; 1.02A {Vibrio cholerae} PDB: 1g6s_A* 1g6t_A* 1x8r_A* 1x8t_A* 2aa9_A* 2aay_A* 2pq9_A* 1eps_A 1mi4_A* 3fjz_A* 3fjx_A* 2qfs_A* 2qft_A* 2qfq_A* 2qfu_A* 3fk0_A* 3fk1_A* 1q36_A* 3ti2_A* 1p88_A ...
Probab=99.93 E-value=1.3e-24 Score=213.50 Aligned_cols=240 Identities=18% Similarity=0.172 Sum_probs=187.8
Q ss_pred cccchhhhcccccccccCCceeEEEcCCCceeeEEEecCCHHH--HHHHHHHHhhcCCcEEEeeC--CCC-hhHHHHHHH
Q 021126 58 TVRTVRASASVGTAEKQSKASEIVLQPIREISGTVTLPGSKSL--SNRILLLAALSEGTTVVDNL--LSS-EDIHHMLDA 132 (317)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~i~I~~~~~l~G~v~ipgskS~--a~r~LlaAaLa~g~t~I~n~--~~s-~dv~~~l~~ 132 (317)
..++|+.+++........+..+++|+|.+...|++++++++|+ ...+|++|++++|.++|+|. ..+ +|+++++++
T Consensus 153 ~l~~L~~lGa~i~~~~~~g~~p~~I~g~~l~gg~i~i~g~~sSq~~s~lLlAa~la~g~t~I~~~~~~~s~p~i~~t~~~ 232 (450)
T 3nvs_A 153 LVDALRQAGAQIEYLEQENFPPLRIQGTGLQAGTVTIDGSISSQFLTAFLMSAPLAQGKVTIKIVGELVSKPYIDITLHI 232 (450)
T ss_dssp HHHHHHHTTCEEEESSSTTSSCEEEECCCCCSEEEEECCSSCTHHHHHHHHHGGGSSSCEEEEESSCCSSHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEcCCCeEeEEEEcCCcCceEEEeCCCCcHHHHHHHHHHHHHCCCcEEEEeCCCcCCchHHHHHHHH
Confidence 3467888888774433455678999997666789999999887 45778888889999999875 234 689999999
Q ss_pred HHHcCCEEEEcCCccEEEEEcCCCCcccccccCCceEEEecCchhhHHHHHHHHHHcCCCcEEEEeCCCCCCCCchHHHH
Q 021126 133 LKKLGLNVEEDFAMKRAIVEGCGGLFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDGVPRMRERPIGDLV 212 (317)
Q Consensus 133 L~~lGa~I~~~~~~~~l~V~g~~~~~~~~~~~~~~~~i~~g~sgta~r~l~a~la~~~~~~~~~i~G~~~l~~rpi~~l~ 212 (317)
|++||++|++++. +.++|+|.+.... + ......+|...+.+|+++++. + .+++.|.|......+++..++
T Consensus 233 L~~~Ga~i~~~g~-~~i~I~g~~~l~~-~-----~~~~v~~D~s~As~~l~aaal-~--~g~v~i~~~~~~~~~~D~~i~ 302 (450)
T 3nvs_A 233 MEQFGVQVINHDY-QEFVIPAGQSYVS-P-----GQFLVEGDASSASYFLAAAAI-K--GGEVKVTGIGKNSIQGDIQFA 302 (450)
T ss_dssp HHHTTCCCEEETT-TEEEECTTCCCBC-C-----SEEECCBCHHHHHHHHHHHHH-H--CSEEEEESCCTTCSCGGGGHH
T ss_pred HHHCCCCEEecCC-cEEEEcCCccccC-C-----cceEecCCHHHHHHHHHHHHh-c--CCeEEEccCCcccccchHHHH
Confidence 9999999998764 4899998653221 1 122234677778877766544 3 478999988777777777789
Q ss_pred HHHHhCCCeEEEeCCCCcccEEEEcCCCCCceEEEeCCCCCHHHHHHHHHHHhcCCCeEEEEEcccc--cccchHHHHHH
Q 021126 213 TGLKQLGADVDCILGTNCPPVRINGKGGLPGGKVKLSGKLSSQYLTALLMAAPLALGNVEIEIIDKL--ISVPYVEMTLK 290 (317)
Q Consensus 213 ~~L~~lGa~i~~~~~~~~~Pi~I~g~~~l~g~~i~l~g~~ssq~~saLllaA~~a~G~~~I~~~~~~--~s~~yv~~t~~ 290 (317)
+.|++||++|+..++ . +++++. +++|.++++...+ +..+.++++|++|+|+++|+++.++ ++.+++..+++
T Consensus 303 ~~L~~mGa~i~~~~~--~--i~v~~~-~L~g~~i~~~~~P--D~~~~l~~~aa~A~G~t~I~~~~~lR~ke~dRi~~l~~ 375 (450)
T 3nvs_A 303 DALEKMGAQIEWGDD--Y--VIARRG-ELNAVDLDFNHIP--DAAMTIATTALFAKGTTAIRNVYNWRVKETDRLAAMAT 375 (450)
T ss_dssp HHHHHHTCEEEECSS--E--EEEECC-CCBCCEEECTTCT--TTHHHHHHHGGGSBSCEEEESCGGGGGSSSCHHHHHHH
T ss_pred HHHHHcCCeEEEeCC--E--EEEecC-CcCcEEeecCCCc--CHHHHHHHHHHHCCCCEEEechhhccCCCchHHHHHHH
Confidence 999999999998753 4 888875 7999999887554 5677899999999999999987754 68888988899
Q ss_pred HHHHcCCEEEEeCCcceEEEecCCCC
Q 021126 291 LMERFGVFVEHSDSWDRFFIQGGQKY 316 (317)
Q Consensus 291 ~L~~lG~~v~~~~d~~~i~I~G~~~~ 316 (317)
+|++||++|++.+ +.++|+|++++
T Consensus 376 eL~kmGa~I~~~~--d~i~I~G~~~L 399 (450)
T 3nvs_A 376 ELRKVGATVEEGE--DFIVITPPTKL 399 (450)
T ss_dssp HHHHTTCEEEECS--SEEEEECCSSC
T ss_pred HHHHcCCEEEEcC--CEEEEeCCCCC
Confidence 9999999999776 58999998654
No 12
>2o0b_A 3-phosphoshikimate 1-carboxyvinyltransferase; shikimate pathway, EPSP synthase, structural genomics; HET: S3P; 1.15A {Mycobacterium tuberculosis} PDB: 2o0d_A* 2o0e_A* 2o0x_A* 2o0z_A* 2o15_A 2bjb_A
Probab=99.93 E-value=1.1e-23 Score=206.76 Aligned_cols=232 Identities=19% Similarity=0.201 Sum_probs=183.9
Q ss_pred ccccchhhhcccccccccCCceeEEEcCCCceee-EEEecCCHHHH--HHHHHHHhhcCCcEEEeeC----CCChhHHHH
Q 021126 57 NTVRTVRASASVGTAEKQSKASEIVLQPIREISG-TVTLPGSKSLS--NRILLLAALSEGTTVVDNL----LSSEDIHHM 129 (317)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~i~I~~~~~l~G-~v~ipgskS~a--~r~LlaAaLa~g~t~I~n~----~~s~dv~~~ 129 (317)
.....|+.+++... . ...+++|++.+.+.| +|++|+|.|++ ..+|++|++++|.++|++. ...+|++.+
T Consensus 128 ~~~~~L~~lGa~i~--~--~~~p~~i~g~~~l~g~~i~i~~d~Ssq~~salllAA~~~~g~~~I~~~~~~~~s~p~i~~t 203 (450)
T 2o0b_A 128 PLLDALRELGVAVD--G--TGLPFRVRGNGSLAGGTVAIDASASSQFVSGLLLSAASFTDGLTVQHTGSSLPSAPHIAMT 203 (450)
T ss_dssp HHHHHHHHTTCEEE--C--SSSSEEEECCSCCCCEEEEECCTTCTHHHHHHHHHGGGSTTCEEEEECSSCCCCHHHHHHH
T ss_pred HHHHHHHHCCCEEE--c--CceeEEEEecCCCcCcEEEcCCCCCHHHHHHHHHHHHHcCCCeEEEeCCCCcCCCcHHHHH
Confidence 34567888887663 2 146899998444655 89999988887 6778888889888888873 334689999
Q ss_pred HHHHHHcCCEEEEcCCccEEEEEcCCCCcccccccCCceEEEe-cCchhhHHHHHHHHHHcCCCcEEEEeCCCCCCCCch
Q 021126 130 LDALKKLGLNVEEDFAMKRAIVEGCGGLFPLAKQQTGEIELFL-GNAGTAMRPLTAAVTAAGGNLSYILDGVPRMRERPI 208 (317)
Q Consensus 130 l~~L~~lGa~I~~~~~~~~l~V~g~~~~~~~~~~~~~~~~i~~-g~sgta~r~l~a~la~~~~~~~~~i~G~~~l~~rpi 208 (317)
+++|++||++|++.+. +.++|+| +.+.. ..+++ +|.+.+.+|++++ +++ +++++|.|....+.|+.
T Consensus 204 ~~~L~~~Ga~I~~~~~-~~i~I~g-~~l~g--------~~~~v~~D~s~A~~~laaa-a~~--~g~v~i~~v~~~~~q~~ 270 (450)
T 2o0b_A 204 AAMLRQAGVDIDDSTP-NRWQVRP-GPVAA--------RRWDIEPDLTNAVAFLSAA-VVS--GGTVRITGWPRVSVQPA 270 (450)
T ss_dssp HHHHHHTTCCEECCST-TEEEECC-CCCCC--------CCEECCBCHHHHHHHHHHH-HHH--TCEEEETTCCSSCSSCH
T ss_pred HHHHHHCCCeEEecCC-cEEEEEC-CCCcC--------ceEEcCCCHHHHHHHHHHH-Hhc--CCeEEECCCCcccccch
Confidence 9999999999986542 4799987 32221 12334 8888899888775 443 47899999998889988
Q ss_pred HHHHHHHHhCCCeEEEeCCCCcccEEEEcCCCCCceEEEeCCCCCHHHHHHHHHHHhcCC--CeEEEEEcccc--cccch
Q 021126 209 GDLVTGLKQLGADVDCILGTNCPPVRINGKGGLPGGKVKLSGKLSSQYLTALLMAAPLAL--GNVEIEIIDKL--ISVPY 284 (317)
Q Consensus 209 ~~l~~~L~~lGa~i~~~~~~~~~Pi~I~g~~~l~g~~i~l~g~~ssq~~saLllaA~~a~--G~~~I~~~~~~--~s~~y 284 (317)
+.+++.|++||++|+..++ . ++|+++..++|.+++...+ ++..+.|+++|++++ |+++|++++++ ++.+|
T Consensus 271 ~~i~~~L~~mGa~i~~~~d--~--i~v~~~~~l~g~~i~~~~~--~D~~p~lavla~~a~~~G~s~I~~~~~lrvkEtdR 344 (450)
T 2o0b_A 271 DHILAILRQLNAVVIHADS--S--LEVRGPTGYDGFDVDLRAV--GELTPSVAALAALASPGSVSRLSGIAHLRGHETDR 344 (450)
T ss_dssp HHHHHHHHHTTCEEEEETT--E--EEEECCSCCCCCEEECTTC--GGGHHHHHHHHHTSSTTCEEEEESCGGGGGSSSCH
T ss_pred HHHHHHHHHcCCeEEEcCC--E--EEEecCCCcceeEEeCCCC--HHHHHHHHHHHHhCCCCCcEEEECCcccccccchh
Confidence 8899999999999998753 3 8898763599998887744 688899999999999 99999988765 57799
Q ss_pred HHHHHHHHHHcCCEEEEeCCcceEEEecC
Q 021126 285 VEMTLKLMERFGVFVEHSDSWDRFFIQGG 313 (317)
Q Consensus 285 v~~t~~~L~~lG~~v~~~~d~~~i~I~G~ 313 (317)
+..+.++|++||++|++.+| .++|+|.
T Consensus 345 i~~~~~eL~klGa~i~~~~d--~~~I~g~ 371 (450)
T 2o0b_A 345 LAALSTEINRLGGTCRETPD--GLVITAT 371 (450)
T ss_dssp HHHHHHHHHHTTCEEEEETT--EEEEECC
T ss_pred HHHHHHHHHHCCCeEEEECC--EEEEECc
Confidence 98889999999999999984 8999873
No 13
>2yvw_A UDP-N-acetylglucosamine 1-carboxyvinyltransferase; peptidoglycan, structu genomics, NPPSFA; HET: EPU; 1.81A {Aquifex aeolicus} PDB: 3swg_A*
Probab=99.91 E-value=8.7e-23 Score=199.10 Aligned_cols=229 Identities=14% Similarity=0.173 Sum_probs=173.4
Q ss_pred cccchhhhcccccccccCCceeEEEcCCCceee-EEEec-CCHHHHHHHHHHHhhcCCcEEEeeCCCChhHHHHHHHHHH
Q 021126 58 TVRTVRASASVGTAEKQSKASEIVLQPIREISG-TVTLP-GSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHMLDALKK 135 (317)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~i~I~~~~~l~G-~v~ip-gskS~a~r~LlaAaLa~g~t~I~n~~~s~dv~~~l~~L~~ 135 (317)
..++|+.+++.... + ++..++++ . .+.| ++.+| +|++.++++|++|++++|.++|+|++..+|+.+|+++|++
T Consensus 134 ~~~~L~~lGa~i~~-~-~g~~~i~~--~-~l~g~~i~~~~~S~~~~s~lllaa~la~g~t~i~~~~~~~~i~~t~~~L~~ 208 (425)
T 2yvw_A 134 HLKFFKEAGADVEV-R-EGYVYVNL--K-EKRRVHFKFDLVTVTGTENALLYLASVPEESILENIALEPEVMDLIEVLKK 208 (425)
T ss_dssp HHHHHHHTTCEEEE-E-TTEEEEEC--S-SCCCCEEECSSCCHHHHHHHHHHHTTCSSEEEEESCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEe-c-CCEEEEEe--c-CccceEEecccccHHHHHHHHHHHHhcCCCEEEeCCCCCchHHHHHHHHHH
Confidence 45678888876632 2 22334444 2 4666 99999 8999999999999999999999999889999999999999
Q ss_pred cCCEEEEcCCccEEEEEcCCCCcccccccCCceEEEecCchhhHHHHHHHHHHcCCCcEEEEeCCCCCCCCchHHHHHHH
Q 021126 136 LGLNVEEDFAMKRAIVEGCGGLFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDGVPRMRERPIGDLVTGL 215 (317)
Q Consensus 136 lGa~I~~~~~~~~l~V~g~~~~~~~~~~~~~~~~i~~g~sgta~r~l~a~la~~~~~~~~~i~G~~~l~~rpi~~l~~~L 215 (317)
||++|++++. +.+ |+|.+.+.. ......+|.+.+.+|+++++ + .+++++++|. ..+++..+++.|
T Consensus 209 ~Ga~i~~~~~-~~i-I~g~~~l~~-------~~~~v~~D~s~A~t~l~aaa-l--~~g~v~l~g~---~~~~~~~l~~~L 273 (425)
T 2yvw_A 209 MGAHVKVEGR-SAY-VKGSENLKG-------FTHSVIPDRIEAGTFMVGAV-L--TDGEILLENA---RINHLRAVVEKL 273 (425)
T ss_dssp TTCEEEEETT-EEE-EECCSSCCC-------CEEECCBCHHHHHHHHHHHH-H--TTCEEEEESC---CGGGCHHHHHHH
T ss_pred CCCeEEEcCC-EEE-EeCCCccCC-------ccccccCchhHHHHHHHHHH-h--CCCcEEEeCC---CchHHHHHHHHH
Confidence 9999998763 367 988653222 12222456667776877754 4 3578999997 478888999999
Q ss_pred HhCCCeEEEeCCCCcccEEEEcCCCCCceEEEeCCCC--CHHHHHHHHHHHhcCCCeEEEEEcccccccchHHHHHHHHH
Q 021126 216 KQLGADVDCILGTNCPPVRINGKGGLPGGKVKLSGKL--SSQYLTALLMAAPLALGNVEIEIIDKLISVPYVEMTLKLME 293 (317)
Q Consensus 216 ~~lGa~i~~~~~~~~~Pi~I~g~~~l~g~~i~l~g~~--ssq~~saLllaA~~a~G~~~I~~~~~~~s~~yv~~t~~~L~ 293 (317)
++|||+|+..+ +. ++|++.++|+|.++++...+ ..+..+.++++|++++|+++|++. ..+ .++ .++++|+
T Consensus 274 ~~mGa~i~~~~--~~--i~i~~~~~L~g~~i~~~~~p~~p~d~~~~~~~aa~~a~G~t~I~~~--~~e-~r~-~~~~~L~ 345 (425)
T 2yvw_A 274 KLIGGEVVEEN--GN--LRVFRKESLRACDIETQVYPGFPTDMQAQFMALLSVAKGKSRIKEN--IFE-HRF-HHAQELN 345 (425)
T ss_dssp HHHTEEEEEET--TE--EEEEECSCCBCCCEEBCSTTSBCHHHHHHHHHHHTTSBSEEEEECS--SCT-TCC-HHHHHHH
T ss_pred HHCCCEEEEcC--CE--EEEEecCCccceEEeCCCCCCCcccHHHHHHHHHHHCCCeEEEEcC--cHH-HHH-HHHHHHH
Confidence 99999999864 34 89988337999999875322 336667788899999999999952 112 233 3578899
Q ss_pred HcCCEEEEeCCcceEEEecCCCC
Q 021126 294 RFGVFVEHSDSWDRFFIQGGQKY 316 (317)
Q Consensus 294 ~lG~~v~~~~d~~~i~I~G~~~~ 316 (317)
+||++|++.+ +.++|+|+++|
T Consensus 346 ~~Ga~i~~~~--d~l~I~g~~~l 366 (425)
T 2yvw_A 346 RLGANITVRG--NTAYVEGVERL 366 (425)
T ss_dssp TTTCCEEEET--TEEEEECCSCC
T ss_pred hCCCEEEEEC--CEEEEeCCCCC
Confidence 9999999887 58999997655
No 14
>4fqd_A NIKO protein; beta/alpha inverse barrel, enolpyruvyl transferase, fosfomyc binding, transferase; 2.50A {Streptomyces tendae}
Probab=99.91 E-value=5.5e-24 Score=210.39 Aligned_cols=237 Identities=16% Similarity=0.133 Sum_probs=175.5
Q ss_pred cccchhhhcccccccccCCceeEEEcCCCceeeEEEe-cCCH-----------HHHHHHHHHHhhcCCcEEEeeCCCChh
Q 021126 58 TVRTVRASASVGTAEKQSKASEIVLQPIREISGTVTL-PGSK-----------SLSNRILLLAALSEGTTVVDNLLSSED 125 (317)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~i~I~~~~~l~G~v~i-pgsk-----------S~a~r~LlaAaLa~g~t~I~n~~~s~d 125 (317)
..++|+.+++....+ .++..++++ ++...++|++ +.+. ++++++|++|+|++|.++|+|...++|
T Consensus 144 ~~~~L~~lGa~i~~~-~~g~~p~~~--~~l~g~~i~l~~~sSSSQfiS~lq~v~~t~~lLlaa~la~G~t~I~~~~~~pd 220 (479)
T 4fqd_A 144 LLDVMGRFGVTTRLT-ADGSVDLTA--QRLTPCTIDMLDYTRNKALMSGPCYSGAVKTALLMGAVTHGTTTLQHPYLKPD 220 (479)
T ss_dssp HHHHHHTTTCEEEEC-TTSCEEEEC--SSCCCCEEEGGGGCSBTTTTBCTTHHHHHHHHHHHHHTSEEEEEEESCCCSHH
T ss_pred HHHHHHHCCCEEEec-cCCceEEEE--cCccccEEEeccccchHHhhccchhHHHHHHHHHHHHhCCCcEEEecCCCChH
Confidence 456788898877433 224455654 3333458999 5333 556789999999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEcCCccEEEEEcCC--CCcccccccCCceEEEecCchhhHHHHHHHHHHcCCCcEEEEeCCCCC
Q 021126 126 IHHMLDALKKLGLNVEEDFAMKRAIVEGCG--GLFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDGVPRM 203 (317)
Q Consensus 126 v~~~l~~L~~lGa~I~~~~~~~~l~V~g~~--~~~~~~~~~~~~~~i~~g~sgta~r~l~a~la~~~~~~~~~i~G~~~l 203 (317)
+..|+++|++||++|+++++ +.++|+|.+ ..+.. ......+|.+.+.+|++++++.. .+++.|+|....
T Consensus 221 i~~Tl~~L~~~Ga~I~~~~~-~~i~I~g~g~~~~l~~------~~~~V~~D~s~Ag~fl~aaal~~--gg~v~l~g~~~~ 291 (479)
T 4fqd_A 221 VTDMVTVLRDLGADIEFAGP-ETWVIHGRGPESLHRP------VDVTLIPDLIEVVTWICAGVLLA--DEPLRITGPGID 291 (479)
T ss_dssp HHHHHHHHHHHTCCEEEEET-TEEEEEEECGGGCCCC------EEEECCBCHHHHHHHHHHHHHHB--SSCEEEECTTHH
T ss_pred HHHHHHHHHHCCCeEEEcCC-CEEEEeCCCCCCccCC------CceEeCCChHhHHHHHHHHHHcC--CCeEEEeCCCCc
Confidence 99999999999999998753 489999873 12221 12223456667777877765533 478999998622
Q ss_pred C-CCchHHHHHHHHhCCCeEEEeCCCCcccEEEEc-CCCCCceEEEeCCC-CCHHHHHHHHHHHhcCCCeEEEEEccccc
Q 021126 204 R-ERPIGDLVTGLKQLGADVDCILGTNCPPVRING-KGGLPGGKVKLSGK-LSSQYLTALLMAAPLALGNVEIEIIDKLI 280 (317)
Q Consensus 204 ~-~rpi~~l~~~L~~lGa~i~~~~~~~~~Pi~I~g-~~~l~g~~i~l~g~-~ssq~~saLllaA~~a~G~~~I~~~~~~~ 280 (317)
+ .|++..+++.|++|||+|++.++ . ++|++ .+.++|.++++... ..+++.+.|+++|++++|+++|+.. ..
T Consensus 292 s~~~~~~~i~~~L~~mGa~i~~~~~--~--i~v~~~~~~L~g~~i~~~~~~~~~D~~p~l~~~a~~A~G~t~I~e~--i~ 365 (479)
T 4fqd_A 292 RAVHALAPEFDLLDRMGVRVDVGAD--E--VTAHPLTKPLRPVEFTAMSRGVFSDSQPFLALLGAYAEGPTYIREA--VW 365 (479)
T ss_dssp HHHHHTHHHHHHHHHHTCCEEECSS--E--EEECCCSSCBCCCEEEECTTSBCTTTHHHHHHHHTTBSEEEEEEES--SS
T ss_pred cccCchHHHHHHHHHCCCEEEEcCC--e--EEEEecCCCCCCeEEecCCCCCCHHHHHHHHHHHHhCCCcEEEEcC--Cc
Confidence 2 56788999999999999998653 3 88988 33799999988521 1346678899999999999999632 22
Q ss_pred ccchHHHHHHHHHHcCCEEEEeCCcceEEEecCCCC
Q 021126 281 SVPYVEMTLKLMERFGVFVEHSDSWDRFFIQGGQKY 316 (317)
Q Consensus 281 s~~yv~~t~~~L~~lG~~v~~~~d~~~i~I~G~~~~ 316 (317)
+ +++ +++++|++||++|++++ +.++|+|+++|
T Consensus 366 e-~R~-~~~~eL~~lGa~i~~~~--d~~~I~g~~~l 397 (479)
T 4fqd_A 366 E-HRF-GFAPELEALGIRTAVDD--TVLRVDGPCPP 397 (479)
T ss_dssp S-SCC-TTHHHHHHHTCCEEEET--TEEEEEESCCC
T ss_pred c-cHH-HHHHHHHHCCCeEEEEC--CEEEEeCCCcc
Confidence 2 333 57899999999999987 58999998766
No 15
>3rmt_A 3-phosphoshikimate 1-carboxyvinyltransferase 1; structural genomics, protein structure initiative; 2.80A {Bacillus halodurans}
Probab=99.91 E-value=3.1e-23 Score=203.50 Aligned_cols=240 Identities=18% Similarity=0.203 Sum_probs=175.9
Q ss_pred ccccchhhhcccccccccCCceeEEEcCCCceeeEEEecCCHHHH-HHHHHHHhhcCCcEEEeeCCCChhHHHHHHHHHH
Q 021126 57 NTVRTVRASASVGTAEKQSKASEIVLQPIREISGTVTLPGSKSLS-NRILLLAALSEGTTVVDNLLSSEDIHHMLDALKK 135 (317)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~i~I~~~~~l~G~v~ipgskS~a-~r~LlaAaLa~g~t~I~n~~~s~dv~~~l~~L~~ 135 (317)
...++|+.+++....+......|++|++.+...++|.+|...++. ..+|++|.+++|.++|.+...++| +++++|++
T Consensus 129 ~~~~~L~~lGa~i~~~~~~~~~Pl~i~g~~l~g~~i~l~~~Ssq~~s~lLlAa~~a~G~t~i~ep~~s~~--~t~~~L~~ 206 (455)
T 3rmt_A 129 RVTEPLKSMGAQIDGRDHGNLTPLSIRGGQLKGIDFHSPVASAQMKSAILLAGLRAEGKTSVTEPAKTRD--HTERMLEA 206 (455)
T ss_dssp HHHHHHHHTTCEEEEHHHHTEEEEEEECCSCBCCEEECSSCCHHHHHHHHHHHHTSBSCEEEECSSCCCC--HHHHHHHH
T ss_pred HHHHHHHHCCCEEEEecCCCcccEEEEeCCccceEEEEccCcHHHHHHHHHHHHhcCCCEEEECCcCcHH--HHHHHHHH
Confidence 345678889887743333335789999864445689998532333 567777778999999987666665 59999999
Q ss_pred cCCEEEEcCCccEEEEEcCCCCcccccccCCceEEEecCchhhHHHHHHHHHHcCCCcEEEEeCCCCCCCCchHHHHHHH
Q 021126 136 LGLNVEEDFAMKRAIVEGCGGLFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDGVPRMRERPIGDLVTGL 215 (317)
Q Consensus 136 lGa~I~~~~~~~~l~V~g~~~~~~~~~~~~~~~~i~~g~sgta~r~l~a~la~~~~~~~~~i~G~~~l~~rpi~~l~~~L 215 (317)
||++|++++ +.++|+|.+.+.+ ......+|.+.+.||++++++. ..+++++.|......+ ..+++.|
T Consensus 207 ~Ga~i~~~g--~~i~I~g~~~l~~-------~~~~V~~D~s~Aa~~l~aaai~--~gg~v~i~~~~~~~~~--~~il~~L 273 (455)
T 3rmt_A 207 FGVNIEKDG--LTVSIEGGQMLTG-------QHVVVPGDISSAAFFLVAGAMV--PHSRITLTNVGINPTR--AGILEVL 273 (455)
T ss_dssp TTCCEEEET--TEEEECSCCCCBC-------CEEECCBCHHHHHHHHHHHHHS--TTEEEEEEEEECCTTT--THHHHHH
T ss_pred CCCCEEecC--CEEEEcCCccccC-------CeeECCCCHHHHHHHHHHHHhc--CCCEEEECCCCCchhH--HHHHHHH
Confidence 999999877 4899999754322 1223368888888888776442 3589999988432333 5699999
Q ss_pred HhCCCeEEEeCCC--Ccc---cEEEEcCCCCCceEEEeCCCCCH---HHHHHHHHHHhcCCCeEEEEEcccc--cccchH
Q 021126 216 KQLGADVDCILGT--NCP---PVRINGKGGLPGGKVKLSGKLSS---QYLTALLMAAPLALGNVEIEIIDKL--ISVPYV 285 (317)
Q Consensus 216 ~~lGa~i~~~~~~--~~~---Pi~I~g~~~l~g~~i~l~g~~ss---q~~saLllaA~~a~G~~~I~~~~~~--~s~~yv 285 (317)
++||++|+..++. +.. +|+|+++ .++|.+|+.. ..+ +..+.|+++|++++|+++|+++.++ +|.+|+
T Consensus 274 ~~mGa~i~~~~~~~~~ge~~~~i~v~~~-~l~~~~i~~~--~~P~~~D~~p~lavla~~a~G~s~I~~~~~LrvkEsdRi 350 (455)
T 3rmt_A 274 KQMGATLAMENERVQGGEPVADLTIETS-VLQGVEIGGD--IIPRLIDEIPIIAVLATQASGRTVIKDAEELKVKETNRI 350 (455)
T ss_dssp HHTTCEEEEEEEEEETTEEEEEEEEECC-CCBCCCEETT--HHHHHGGGHHHHHHHHHTSBSCEEEEC-----CHHHHHH
T ss_pred HHcCCEEEEcCCcccCCccceEEEEecC-CceeEEEeCc--cCCchHHHHHHHHHHHHhCCCcEEEEccccccccchhHH
Confidence 9999999986531 111 2788875 7999888755 234 4467888999999999999987764 577899
Q ss_pred HHHHHHHHHcCCEEEEeCCcceEEEecCCCC
Q 021126 286 EMTLKLMERFGVFVEHSDSWDRFFIQGGQKY 316 (317)
Q Consensus 286 ~~t~~~L~~lG~~v~~~~d~~~i~I~G~~~~ 316 (317)
..++++|++||++|++++ +.++|+|++++
T Consensus 351 ~a~~~eL~kmGa~i~~~~--d~l~I~G~~~l 379 (455)
T 3rmt_A 351 DTVVSELTKLGASIHATD--DGMIIEGPTPL 379 (455)
T ss_dssp HHHHHHHHHTTCCEEEET--TEEEECSCCCC
T ss_pred HHHHHHHHHCCCEEEEEC--CEEEEECCCCC
Confidence 889999999999999988 48999998655
No 16
>3r38_A UDP-N-acetylglucosamine 1-carboxyvinyltransferase; biosynthesis and degradation of murein sacculus and peptidog infectious diseases; 2.23A {Listeria monocytogenes} PDB: 3sg1_A*
Probab=99.89 E-value=1.1e-21 Score=192.79 Aligned_cols=231 Identities=18% Similarity=0.202 Sum_probs=166.2
Q ss_pred cccchhhhcccccccccCCceeEEEcCCCceeeEEEecCC-HHHHHHHHHHHhhcCCcEEEeeCCCChhHHHHHHHHHHc
Q 021126 58 TVRTVRASASVGTAEKQSKASEIVLQPIREISGTVTLPGS-KSLSNRILLLAALSEGTTVVDNLLSSEDIHHMLDALKKL 136 (317)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~i~I~~~~~l~G~v~ipgs-kS~a~r~LlaAaLa~g~t~I~n~~~s~dv~~~l~~L~~l 136 (317)
...+|+.+++....+ ++ .+.+++.+...+++++|.. ...++++|++|++++|.++|+|.+..+|+.+|+++|++|
T Consensus 151 ~~~~L~~lGa~i~~~--~g--~~~i~~~~l~g~~~~l~~~S~q~~s~lLlAa~la~G~t~I~~~~~~p~i~~t~~~L~~~ 226 (454)
T 3r38_A 151 HLKGFEAMGAVVKIE--NG--YIEATAEKLVGAKVYLDFPSVGATQNIMMAATLAEGTTVIENVAREPEIVDLANFLNQM 226 (454)
T ss_dssp HHHHHHHTTCEEEEE--TT--EEEEECSSCBCCEEECSSCCHHHHHHHHHHHTTSBSEEEEESCCCCHHHHHHHHHHHHT
T ss_pred HHHHHHHCCCEEEec--CC--EEEEEEcCccCcEEEecCCCHHHHHHHHHHHhcCCCcEEEEcCCCCcHHHHHHHHHHHC
Confidence 456788888776432 22 3556654333458899854 444579999999999999999998889999999999999
Q ss_pred CCEEEEcCCccEEEEEcCCCCcccccccCCceEEEecCchhhHHHHHHHHHHcCCCcEEEEeCCCCCCCCchHHHHHHHH
Q 021126 137 GLNVEEDFAMKRAIVEGCGGLFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDGVPRMRERPIGDLVTGLK 216 (317)
Q Consensus 137 Ga~I~~~~~~~~l~V~g~~~~~~~~~~~~~~~~i~~g~sgta~r~l~a~la~~~~~~~~~i~G~~~l~~rpi~~l~~~L~ 216 (317)
|++|++++. +.++|+|.+..... ..-..+|.+.+.+|+++++ ++ ++++++.|. ..+++..+++.|+
T Consensus 227 Ga~I~~~~~-~~i~I~g~~~l~~~-------~~~v~~D~s~A~~~l~aaa-l~--gg~v~i~g~---~~~~~~~i~~~L~ 292 (454)
T 3r38_A 227 GARVIGAGT-EVIRIEGVKELTAT-------EHSIIPDRIEAGTFMIAAA-IT--GGNVLIEDA---VPEHISSLIAKLE 292 (454)
T ss_dssp TCCEECTTS-SEEEEECCSCEECC-------EEECCBCHHHHHHHHHHHH-HT--TCEEEEESC---CGGGGHHHHHHHH
T ss_pred CCCEEECCC-eEEEEecCcccccc-------ccccCCChhHHHHHHHHHH-Hc--CCcEEEcCC---CchHHHHHHHHHH
Confidence 999997653 48999997532221 1222456666666776554 42 478999985 5678999999999
Q ss_pred hCCCeEEEeCCCCcccEEEEcCCCCCceEEEeCCCC--CHHHHHHHHHHHhcCCCeEEEEEcccccccchHHHHHHHHHH
Q 021126 217 QLGADVDCILGTNCPPVRINGKGGLPGGKVKLSGKL--SSQYLTALLMAAPLALGNVEIEIIDKLISVPYVEMTLKLMER 294 (317)
Q Consensus 217 ~lGa~i~~~~~~~~~Pi~I~g~~~l~g~~i~l~g~~--ssq~~saLllaA~~a~G~~~I~~~~~~~s~~yv~~t~~~L~~ 294 (317)
+|||+|+..++ + ++|++.++++|.++++...+ ..++.+.++++|++++|+++|++. +. .+++.. +++|++
T Consensus 293 ~mGa~i~~~~~-~---i~V~g~~~L~g~~i~~~~~p~~p~D~~~~l~~laa~A~G~t~i~e~--i~-~~R~~~-~~~L~~ 364 (454)
T 3r38_A 293 EMGVQIIEEEN-G---IRVIGPDKLKAVDVKTMPHPGFPTDMQSQMMVIQMLSEGTSIMTET--VF-ENRFMH-VEEMRR 364 (454)
T ss_dssp HTTCEEEEC---C---EEEECCSSCCCCCEEBCSTTSBCGGGHHHHHHHHHHSSSEEEEECS--SC-TTCCTT-HHHHHH
T ss_pred HCCCEEEecCC-e---EEEEECCCccceEEecccCCCCcccHHHHHHHHHHhcCCCEEEEcC--cc-ccHHHH-HHHHHh
Confidence 99999998653 3 89998547999999864222 124444566677899999999831 21 233333 578999
Q ss_pred cCCEEEEeCCcceEEEecCCCC
Q 021126 295 FGVFVEHSDSWDRFFIQGGQKY 316 (317)
Q Consensus 295 lG~~v~~~~d~~~i~I~G~~~~ 316 (317)
||++|++.+ +.++|+|+++|
T Consensus 365 mGa~i~~~~--d~l~I~G~~~l 384 (454)
T 3r38_A 365 MNADMKIEG--HSVIISGPAKL 384 (454)
T ss_dssp TTCCEEEET--TEEEEECSCCC
T ss_pred CCCEEEEEC--CEEEEeCCCCc
Confidence 999999987 48999998765
No 17
>3slh_A 3-phosphoshikimate 1-carboxyvinyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: S3P GPJ SKM PGE 1PE PG4; 1.70A {Coxiella burnetii} PDB: 3roi_A* 4egr_A* 4gfp_A 3tr1_A
Probab=99.88 E-value=6e-22 Score=193.96 Aligned_cols=237 Identities=20% Similarity=0.225 Sum_probs=173.1
Q ss_pred ccccchhhhcccccccccCCceeEEEcCCCcee-eEEEecCC-HHHHHHHHHHHhhcCCcEEEeeCCCChhHHHHHHHHH
Q 021126 57 NTVRTVRASASVGTAEKQSKASEIVLQPIREIS-GTVTLPGS-KSLSNRILLLAALSEGTTVVDNLLSSEDIHHMLDALK 134 (317)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~i~I~~~~~l~-G~v~ipgs-kS~a~r~LlaAaLa~g~t~I~n~~~s~dv~~~l~~L~ 134 (317)
...++|+.+++.. ...++..|++|++.+.+. +++++|.. .-....+|++|++++|.++|.+....+| +++++|+
T Consensus 130 ~~~~~L~~lGa~i--~~~~g~~p~~i~g~~~l~g~~i~l~~~Ssq~~s~lLlAa~~a~g~t~i~e~~~~~~--~t~~~L~ 205 (441)
T 3slh_A 130 RIIDPLTLMGAKI--DSTGNVPPLKIYGNPRLTGIHYQLPMASAQVKSCLLLAGLYARGKTCITEPAPSRD--HTERLLK 205 (441)
T ss_dssp HHHHHHHHTTCEE--EEETTEEEEEEECCTTCBCCEEECSSCCHHHHHHHHHHHTTSBSEEEEECSSCCCC--HHHHHHH
T ss_pred HHHHHHHHcCCEE--EecCCeEEEEEEcCCCccceEEEecCCCHHHHHHHHHHHHhcCCCeEeeCCcccHH--HHHHHHH
Confidence 3456788898876 344557889999864354 58999963 3333677778888999999876443444 6899999
Q ss_pred HcCCEEEEcCCccEEEEEcCCCCcccccccCCceEEEecCchhhHHHHHHHHHHcCCCcEEEEeCCCCCCCCchHHHHHH
Q 021126 135 KLGLNVEEDFAMKRAIVEGCGGLFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDGVPRMRERPIGDLVTG 214 (317)
Q Consensus 135 ~lGa~I~~~~~~~~l~V~g~~~~~~~~~~~~~~~~i~~g~sgta~r~l~a~la~~~~~~~~~i~G~~~l~~rpi~~l~~~ 214 (317)
+||++|++++ +.++|+|.+.... ......+|.+.+.+|++++++ + ..+++.+.|.+....| ..+++.
T Consensus 206 ~~Ga~i~~~~--~~i~I~g~~~l~~-------~~~~V~~D~ssAa~~l~aaal-~-~g~~v~l~g~~~~~~~--~~~l~~ 272 (441)
T 3slh_A 206 HFHYTLQKDK--QSICVSGGGKLKA-------NDISIPGDISSAAFFIVAATI-T-PGSAIRLCRVGVNPTR--LGVINL 272 (441)
T ss_dssp HTTCCCEECS--SCEEEETTCCCBC-------CCEECCBCHHHHHHHHHHHHH-S-TTCEEEEEEEECCGGG--CHHHHH
T ss_pred HCCCeEEEeC--CEEEEcCCCcccc-------ceEEeCCCHHHHHHHHHHHHh-c-CCCEEEEcCCCCCccH--HHHHHH
Confidence 9999999876 3899999753322 123335788888888877644 3 3579999998533333 358999
Q ss_pred HHhCCCeEEEeCCC--Cccc---EEEEcCCCCCceEEEeCCCCC-HHHHHHHHHHHhcCCCeEEEEEcccc--cccchHH
Q 021126 215 LKQLGADVDCILGT--NCPP---VRINGKGGLPGGKVKLSGKLS-SQYLTALLMAAPLALGNVEIEIIDKL--ISVPYVE 286 (317)
Q Consensus 215 L~~lGa~i~~~~~~--~~~P---i~I~g~~~l~g~~i~l~g~~s-sq~~saLllaA~~a~G~~~I~~~~~~--~s~~yv~ 286 (317)
|++||++|+..++. +..| +++++. .++|.+|+.+..++ .+..+.|+++|++++|+++|+++.++ ++.|++.
T Consensus 273 L~~mGa~i~~~~~~~~~~e~~~~i~v~~~-~l~g~~i~~~~~p~~~D~~p~l~~~aa~A~G~t~I~~i~~lR~kEsdRi~ 351 (441)
T 3slh_A 273 LKMMGADIEVTHYTEKNEEPTADITVRHA-RLKGIDIPPDQVPLTIDEFPVLLIAAAVAQGKTVLRDAAELRVKETDRIA 351 (441)
T ss_dssp HHHHTCEEEEEEEEEETTEEEEEEEEECC-CCBCCEECGGGHHHHGGGHHHHHHHHHTSBSEEEECSCGGGGGSSSCHHH
T ss_pred HHHcCCEEEEcCCccccCccceEEEEecC-CCCceEEecccCCCcHHHHHHHHHHHHhCCCeEEEEeccccccccchHHH
Confidence 99999999986531 0112 677765 79998876431111 14567889999999999999988764 6789999
Q ss_pred HHHHHHHHcCCEEEEeCCcceEEEecC
Q 021126 287 MTLKLMERFGVFVEHSDSWDRFFIQGG 313 (317)
Q Consensus 287 ~t~~~L~~lG~~v~~~~d~~~i~I~G~ 313 (317)
.++++|++||++|++.+ +.++|+|+
T Consensus 352 ~l~~eL~kmGa~i~~~~--d~l~I~G~ 376 (441)
T 3slh_A 352 AMVDGLQKLGIAAESLP--DGVIIQGG 376 (441)
T ss_dssp HHHHHHHHTTCEEEEET--TEEEEECC
T ss_pred HHHHHHHHCCCEEEEeC--CEEEEECC
Confidence 99999999999999887 58999993
No 18
>2pqc_A 3-phosphoshikimate 1-carboxyvinyltransferase; inside-OUT alpha/beta barrel; HET: RC1; 1.60A {Agrobacterium SP} PDB: 2pqb_A* 2gg6_A* 2gg4_A* 2gga_A* 2ggd_A* 2pqd_A*
Probab=99.88 E-value=2e-21 Score=190.48 Aligned_cols=238 Identities=19% Similarity=0.242 Sum_probs=172.5
Q ss_pred ccccchhhhcccccccccCCceeEEEcCC-CceeeEEEecCCHHHHHHHHHHHh-hcCCcEEEeeCCCChhHHHHHHHHH
Q 021126 57 NTVRTVRASASVGTAEKQSKASEIVLQPI-REISGTVTLPGSKSLSNRILLLAA-LSEGTTVVDNLLSSEDIHHMLDALK 134 (317)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~i~I~~~-~~l~G~v~ipgskS~a~r~LlaAa-La~g~t~I~n~~~s~dv~~~l~~L~ 134 (317)
.....|+.|++....+ ...-.|++|++. +...+++++|+.+|...+.|++|+ +++|+++|.+...++| ++.++|+
T Consensus 127 ~~l~~L~~~Ga~i~~~-~~g~~Pi~i~~~~~l~g~~i~~~~~ssq~~~~lllaa~~a~G~t~I~~~~~~~~--~~~~~L~ 203 (445)
T 2pqc_A 127 RVLNPLREMGVQVKSE-DGDRLPVTLRGPKTPTPITYRVPMASAQVKSAVLLAGLNTPGITTVIEPIMTRD--HTEKMLQ 203 (445)
T ss_dssp HHHHHHHHTTCEEEEE-TTTEEEEEEECCSSCCCCEEECSSSCHHHHHHHHHHHHTSSSEEEEEESSCCCC--HHHHHHH
T ss_pred HHHHHHHHCCCEEEec-cCCcccEEEeCCCCCCCeEEEeCCCCHHHHHHHHHHHhhCCCceEEEEccCCHH--HHHHHHH
Confidence 4567888999876432 333567999875 344568999977777776666555 5999998887666666 5669999
Q ss_pred HcCCEEEEc--CC-ccEEEEEcCCCCcccccccCCceEEEe-cCchhhHHHHHHHHHHcCCCcEEEEeCCCCCCCCchHH
Q 021126 135 KLGLNVEED--FA-MKRAIVEGCGGLFPLAKQQTGEIELFL-GNAGTAMRPLTAAVTAAGGNLSYILDGVPRMRERPIGD 210 (317)
Q Consensus 135 ~lGa~I~~~--~~-~~~l~V~g~~~~~~~~~~~~~~~~i~~-g~sgta~r~l~a~la~~~~~~~~~i~G~~~l~~rpi~~ 210 (317)
+||++|+++ +. .+.++|+|.+.+.. ..+++ +|...+++|++++++ + +...+++.|...-+.++ .
T Consensus 204 ~~Ga~I~~~~~~~g~~~~~I~g~~~l~~--------~~~~v~~D~s~a~~~l~aa~~-~-~g~~v~i~~~~~~~~~~--~ 271 (445)
T 2pqc_A 204 GFGANLTVETDADGVRTIRLEGRGKLTG--------QVIDVPGDPSSTAFPLVAALL-V-PGSDVTILNVLMNPTRT--G 271 (445)
T ss_dssp HTTCCEEEEECTTSCEEEEEETTCCCBC--------CEEECCBCHHHHHHHHHHHHH-S-TTCEEEEEEEECCGGGC--H
T ss_pred HCCCEEEEecCCCCccEEEEeCCccccC--------ceeEcCCCHHHHHHHHHHHHH-C-CCCEEEECCCCCCCCcc--h
Confidence 999999865 41 13799998653221 13333 566666767766554 2 33459999876333443 4
Q ss_pred HHHHHHhCCCeEEEeCC---CC--cccEEEEcCCCCCceEEEeCCCCCH--HHHHHHHHHHhcCCCeEEEEEccc--ccc
Q 021126 211 LVTGLKQLGADVDCILG---TN--CPPVRINGKGGLPGGKVKLSGKLSS--QYLTALLMAAPLALGNVEIEIIDK--LIS 281 (317)
Q Consensus 211 l~~~L~~lGa~i~~~~~---~~--~~Pi~I~g~~~l~g~~i~l~g~~ss--q~~saLllaA~~a~G~~~I~~~~~--~~s 281 (317)
+++.|++|||+|+..++ .+ ..|++|+++ +++|.+++++. .+. +..++|+++|++++|+++|++..+ ++|
T Consensus 272 ~~~~L~~mGa~i~~~~~~~~~g~~~~~i~v~~~-~l~~~~i~~~~-~p~~~D~~p~l~~~a~~a~G~s~i~~~~~lr~kE 349 (445)
T 2pqc_A 272 LILTLQEMGADIEVINPRLAGGEDVADLRVRSS-TLKGVTVPEDR-APSMIDEYPILAVAAAFAEGATVMNGLEELRVKE 349 (445)
T ss_dssp HHHHHHHHTCEEEEEEEEEETTEEEEEEEEECC-CCBCCEECGGG-GGGTGGGHHHHHHHHTTSBSEEEECCCGGGGGSS
T ss_pred HHHHHHHcCCeEEEccccccCCCccCcEEEeCC-CCCceEecccc-CCchHHHHHHHHHHHHhCCCcEEEEccccccccc
Confidence 99999999999987310 11 246999886 79999887763 222 556789999999999999998775 578
Q ss_pred cchHHHHHHHHHHcCCEEEEeCCcceEEEecC
Q 021126 282 VPYVEMTLKLMERFGVFVEHSDSWDRFFIQGG 313 (317)
Q Consensus 282 ~~yv~~t~~~L~~lG~~v~~~~d~~~i~I~G~ 313 (317)
++|+..++++|++||++|+..+ +.++|+|+
T Consensus 350 sdRi~~~~~eL~~~Ga~i~~~~--d~~~I~g~ 379 (445)
T 2pqc_A 350 SDRLSAVANGLKLNGVDCDEGE--TSLVVRGR 379 (445)
T ss_dssp SCHHHHHHHHHHHTTCEEEECS--SCEEEECC
T ss_pred chHHHHHHHHHHHCCCEEEEcC--CEEEEeCC
Confidence 8999999999999999999876 58999986
No 19
>1rf6_A 5-enolpyruvylshikimate-3-phosphate synthase; shikimate pathway, EPSP synthase, glyphosate, PEP, transferase; HET: GPJ S3P; 1.90A {Streptococcus pneumoniae} SCOP: d.68.2.2 PDB: 1rf5_A 1rf4_A*
Probab=99.87 E-value=7.9e-21 Score=185.37 Aligned_cols=237 Identities=15% Similarity=0.190 Sum_probs=172.8
Q ss_pred cccchhhhcccccccccCCceeEEEcCCCcee-eEEEecCCHHHH--HHHHHHHhhcCCcEEEeeCCCChhHHHHHHHHH
Q 021126 58 TVRTVRASASVGTAEKQSKASEIVLQPIREIS-GTVTLPGSKSLS--NRILLLAALSEGTTVVDNLLSSEDIHHMLDALK 134 (317)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~i~I~~~~~l~-G~v~ipgskS~a--~r~LlaAaLa~g~t~I~n~~~s~dv~~~l~~L~ 134 (317)
....|+.|++....+......|++|++...++ +++.+| +.|++ ..++++|++++|.++|.+...+++ ++.+.|+
T Consensus 125 ~l~~L~~mGa~i~~~~~~g~~pi~i~~~~~L~g~~i~~~-~~ssq~~s~lllaA~~a~G~t~I~~~~~~~~--~i~~~L~ 201 (427)
T 1rf6_A 125 VTLPLKKMGVSISGQTERDLPPLRLKGTKNLRPIHYELP-IASAQVKSALMFAALQAKGESVIIEKEYTRN--HTEDMLQ 201 (427)
T ss_dssp HHHHHHHTTCEEEEETTTTEEEEEEECCTTCCCCEEECS-SCCHHHHHHHHHHHTTSSEEEEEECSSCCCC--HHHHHHH
T ss_pred HHHHHHHCCCEEEEEcCCCcceEEEeccCCCCceEEEeC-CCCHHHHHHHHHHHHhcCCCeEEEeccCCHH--HHHHHHH
Confidence 56788999987754433344579998742355 578998 65544 466777888999998775544444 2338999
Q ss_pred HcCCEEEEcCCccEEEEEcCCCCcccccccCCceEEEecCchhhHHHHHHHHHHcCCCcE-EEEeCCCCCCCCchHHHHH
Q 021126 135 KLGLNVEEDFAMKRAIVEGCGGLFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLS-YILDGVPRMRERPIGDLVT 213 (317)
Q Consensus 135 ~lGa~I~~~~~~~~l~V~g~~~~~~~~~~~~~~~~i~~g~sgta~r~l~a~la~~~~~~~-~~i~G~~~l~~rpi~~l~~ 213 (317)
+||++|++.++ .++|+|...+.. ...-..+|...+++|++++++. ++. +++.|.+.-..++. +++
T Consensus 202 ~~Ga~i~~~~~--~i~I~g~~~l~g-------~~~~v~~D~~~A~~~~~Aa~~~---~g~~v~i~~~~~~~~~~~--~~~ 267 (427)
T 1rf6_A 202 QFGGHLSVDGK--KITVQGPQKLTG-------QKVVVPGDISSAAFWLVAGLIA---PNSRLVLQNVGINETRTG--IID 267 (427)
T ss_dssp HTTCCCEEETT--EEEEEECCCCBC-------CEEECCBCHHHHHHHHHHHHHS---TTEEEEEEEEECCTTTCH--HHH
T ss_pred HCCCCEEecCC--EEEEcCCcccCC-------CeEEcCCCHHHHHHHHHHHHhC---CCCEEEECCCCCCCChhH--HHH
Confidence 99999998764 899998653322 1222357888899888776542 355 99999874456664 999
Q ss_pred HHHhCCCeEEEeCC--CC-cccEEEEcCCCCCceEEEeCCCCCH---HHHHHHHHHHhcCCCeEEEEEcccc--cccchH
Q 021126 214 GLKQLGADVDCILG--TN-CPPVRINGKGGLPGGKVKLSGKLSS---QYLTALLMAAPLALGNVEIEIIDKL--ISVPYV 285 (317)
Q Consensus 214 ~L~~lGa~i~~~~~--~~-~~Pi~I~g~~~l~g~~i~l~g~~ss---q~~saLllaA~~a~G~~~I~~~~~~--~s~~yv 285 (317)
.|++||++|+..++ .+ .-.++|+++ .+++.+++... -+ +..+.|+++|++++|+++|+++.++ +|++|+
T Consensus 268 ~L~~mGa~i~~~~~~~~~~~~~i~v~~~-~l~~~~i~~~~--~p~~~D~~p~l~~la~~a~G~s~i~~~~~lr~kEsdR~ 344 (427)
T 1rf6_A 268 VIRAMGGKLEITEIDPVAKSATLIVESS-DLKGTEICGAL--IPRLIDELPIIALLATQAQGVTVIKDAEELKVKETDRI 344 (427)
T ss_dssp HHHHTTCEEEEEEEETTTTEEEEEEECC-CCBCCEECTTS--GGGTGGGHHHHHHHHHTSBEEEEECSCGGGGGSSSCTT
T ss_pred HHHHcCCcEEEccccCCCCcceEEEeCC-CCCcEEecccc--CCChHHHHHHHHHHHHhCCCcEEEEcccccccchhHHH
Confidence 99999999987410 10 011788875 79998876553 34 6678899999999999999987764 677999
Q ss_pred HHHHHHHHHcCCEEEEeCCcceEEEecCCCC
Q 021126 286 EMTLKLMERFGVFVEHSDSWDRFFIQGGQKY 316 (317)
Q Consensus 286 ~~t~~~L~~lG~~v~~~~d~~~i~I~G~~~~ 316 (317)
..+.++|++||++|++.+| .++|+|.+++
T Consensus 345 ~~~~~eL~~lGa~i~~~~d--~~~I~g~~~l 373 (427)
T 1rf6_A 345 QVVADALNSMGADITPTAD--GMIIKGKSAL 373 (427)
T ss_dssp HHHHHHHHTTTCCEEEETT--EEEEEECCCC
T ss_pred HHHHHHHHHCCCEEEEECC--EEEEeCCCCC
Confidence 9889999999999999984 8999996544
No 20
>1ejd_A MURA, EPT, UDP-N-acetylglucosamine enolpyruvyltransferase; inside-OUT alpha/beta barrel; 1.55A {Enterobacter cloacae} SCOP: d.68.2.2 PDB: 1ejc_A 1eyn_A* 1ybg_A* 3kqa_A* 3lth_A* 3spb_A 3swq_A* 3upk_A* 1naw_A 1dlg_A 1ryw_A* 1q3g_A* 3su9_A* 3swi_A* 3v4t_A* 3v5v_A* 3swa_A* 1uae_A* 3kqj_A* 3kr6_A* ...
Probab=99.85 E-value=3.7e-19 Score=173.09 Aligned_cols=230 Identities=16% Similarity=0.155 Sum_probs=167.2
Q ss_pred cccchhhhcccccccccCCceeEEEcCCCceee-EEEecC-CHHHHHHHHHHHhhcCCcEEEeeCCCChhHHHHHHHHHH
Q 021126 58 TVRTVRASASVGTAEKQSKASEIVLQPIREISG-TVTLPG-SKSLSNRILLLAALSEGTTVVDNLLSSEDIHHMLDALKK 135 (317)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~i~I~~~~~l~G-~v~ipg-skS~a~r~LlaAaLa~g~t~I~n~~~s~dv~~~l~~L~~ 135 (317)
....|+.|++.... . .. .+.++..+.++| ++.+|. |.-.+..++++|++++|.++|+|....+++.+++++|++
T Consensus 125 ~~~~L~~mGa~i~~-~-~g--~~~v~~~~~L~g~~i~~~~~s~~~~~~ll~aa~~a~G~t~I~~~~~e~~i~~t~~~L~~ 200 (419)
T 1ejd_A 125 HIFGLEKLGAEIKL-E-EG--YVKASVNGRLKGAHIVMDKVSVGATVTIMSAATLAEGTTIIENAAREPEIVDTANFLVA 200 (419)
T ss_dssp HHHHHHHTTCEEEE-E-TT--EEEEECSSSCBCCEEECSSCCHHHHHHHHHHHTTSBSEEEEETCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEE-c-CC--EEEEEEcCCccceEEecCCCCHHHHHHHHHHHhcCCCcEEEEeCCCCchHHHHHHHHHH
Confidence 46688889987643 2 22 344544324554 788884 333445777788899999999998777899999999999
Q ss_pred cCCEEEEcCCccEEEEEcCCCCcccccccCCceEEEecCchhhHHHHHHHHHHcCCCcEEEEeCCCCCCCCchHHHHHHH
Q 021126 136 LGLNVEEDFAMKRAIVEGCGGLFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDGVPRMRERPIGDLVTGL 215 (317)
Q Consensus 136 lGa~I~~~~~~~~l~V~g~~~~~~~~~~~~~~~~i~~g~sgta~r~l~a~la~~~~~~~~~i~G~~~l~~rpi~~l~~~L 215 (317)
||++|++++. +.++|+|.+.+.. ...-..+|...+++|+++++ + .++++++.|.. .+....+++.|
T Consensus 201 ~Ga~i~~~~~-~~i~I~g~~~l~g-------~~~~v~~D~s~A~~~~~aa~-~--~~g~v~i~~~~---~~~~~~~~~~L 266 (419)
T 1ejd_A 201 LGAKISGQGT-DRITIEGVERLGG-------GVYRVLPDRIETGTFLVAAA-I--SGGKIVCRNAQ---PDTLDAVLAKL 266 (419)
T ss_dssp TTCEEECTTS-SEEEEECCSCBCC-------EEEECCBCHHHHHHHHHHHH-T--TTCEEEEESCC---GGGCHHHHHHH
T ss_pred CCCEEEEccC-CEEEEeCCCcccc-------cEEEeeCCHHHHHHHHHHHH-h--cCCeEEEeCcC---cccHHHHHHHH
Confidence 9999997653 4899998653322 12233578888888876654 3 35789999986 34466899999
Q ss_pred HhCCCeEEEeCCCCcccEEEEc-CCCCCceEEEeCCCC--CHHHHHHHHHHHhcCCCeEEEE-EcccccccchHHHHHHH
Q 021126 216 KQLGADVDCILGTNCPPVRING-KGGLPGGKVKLSGKL--SSQYLTALLMAAPLALGNVEIE-IIDKLISVPYVEMTLKL 291 (317)
Q Consensus 216 ~~lGa~i~~~~~~~~~Pi~I~g-~~~l~g~~i~l~g~~--ssq~~saLllaA~~a~G~~~I~-~~~~~~s~~yv~~t~~~ 291 (317)
++||++|+..+ +. ++|++ ++.+++.+++....+ ..+..+.|+++|++++|+++|+ ++.+ .|+.. .++
T Consensus 267 ~~mGa~i~~~~--~~--i~v~~~~~~l~~~~i~~~~~p~~~~D~~p~la~la~~a~g~s~i~~~i~~----~R~~~-~~e 337 (419)
T 1ejd_A 267 REAGADIETGE--DW--ISLDMHGKRPKAVTVRTAPHPAFPTDMQAQFTLLNLVAEGTGVITETIFE----NRFMH-VPE 337 (419)
T ss_dssp HHTTCEEEECS--SE--EEEECTTCCCBCCCEECCSTTSCCGGGHHHHHHHHHTSBSEEEEECCSCS----SCCTH-HHH
T ss_pred HHCCCEEEEcC--CE--EEEEecCCCccceEEeCCCCCCCcHHHHHHHHHHHHhCCCcEEEEccchH----hHHHH-HHH
Confidence 99999999865 33 88987 237999888865222 1256677889999999999999 3432 44444 678
Q ss_pred HHHcCCEEEEeCCcceEEEecCCCC
Q 021126 292 MERFGVFVEHSDSWDRFFIQGGQKY 316 (317)
Q Consensus 292 L~~lG~~v~~~~d~~~i~I~G~~~~ 316 (317)
|++||++|++.+| .+.|+|++++
T Consensus 338 L~~lG~~i~~~~d--~~~I~g~~~l 360 (419)
T 1ejd_A 338 LIRMGAHAEIESN--TVICHGVEKL 360 (419)
T ss_dssp HHHTTCEEEEETT--EEEEECCSCC
T ss_pred HHHCCCEEEEECC--EEEEeCCCCC
Confidence 9999999999984 8999987644
No 21
>3tut_A RNA 3'-terminal phosphate cyclase; cyclase family, cyclization of RNA 3'-phosphate ENDS, transf; HET: ATP; 1.58A {Escherichia coli} PDB: 3tux_A* 3tv1_A* 3tw3_A* 3kgd_A* 1qmh_A* 1qmi_A
Probab=96.12 E-value=0.077 Score=49.90 Aligned_cols=122 Identities=16% Similarity=0.229 Sum_probs=79.2
Q ss_pred hhhHHHHHHHHHHcCCCcEEEEeCCCCCCCCc-h-H---HHHHHHHhC-CCeEEEeCCCCcccEEEEcCCCCCceEEEeC
Q 021126 176 GTAMRPLTAAVTAAGGNLSYILDGVPRMRERP-I-G---DLVTGLKQL-GADVDCILGTNCPPVRINGKGGLPGGKVKLS 249 (317)
Q Consensus 176 gta~r~l~a~la~~~~~~~~~i~G~~~l~~rp-i-~---~l~~~L~~l-Ga~i~~~~~~~~~Pi~I~g~~~l~g~~i~l~ 249 (317)
|..+|.-+++.++++ .++.|.+.-.-+.+| + . ..++.+.++ |++++...- |..-+...++ .+.|+++..+
T Consensus 36 GQ~lR~alaLS~Ltg--kpv~I~nIR~~r~~PGL~~qhl~~l~ll~~it~a~veg~~~-GSt~l~f~PG-~i~gg~~~~d 111 (358)
T 3tut_A 36 GQILRSALSLSMITG--QPFTITSIRAGRAKPGLLRQHLTAVKAATEICGATVEGAEL-GSQRLLFRPG-TVRGGDYRFA 111 (358)
T ss_dssp THHHHHHHHHHHHHC--CCEEEESTTTTSSSCSCCHHHHHHHHHHHHHHTCEEECCST-TCSCEEEECC-CCCCCEEEEE
T ss_pred hHHHHHHHHHHHhhC--CCEEEEEecCCCCCccccHHHHHHHHHHHHhhCCEEEEeec-CcEEEEEECC-CccCceEEEE
Confidence 456777777777753 688998875555555 2 1 234444443 899986542 4333777775 7889887765
Q ss_pred CC--CC-HHHHHHHHHHHhcCCCeEEEE--Ecccc---cccchHH-HHHHHHHHcCCEEEE
Q 021126 250 GK--LS-SQYLTALLMAAPLALGNVEIE--IIDKL---ISVPYVE-MTLKLMERFGVFVEH 301 (317)
Q Consensus 250 g~--~s-sq~~saLllaA~~a~G~~~I~--~~~~~---~s~~yv~-~t~~~L~~lG~~v~~ 301 (317)
-. -| .-++-+++.++++++++++|+ +..+. .+.||+. .++..|++||++++.
T Consensus 112 ~~tagSi~l~lq~lLp~~lFa~~p~~l~l~GgTn~~~~psvDy~~~v~lP~l~~fG~~~~l 172 (358)
T 3tut_A 112 IGSAGSCTLVLQTVLPALWFADGPSRVEVSGGTDNPSAPPADFIRRVLEPLLAKIGIHQQT 172 (358)
T ss_dssp CSSSCBHHHHHHHHHHHHTTSSSCEEEEEEEBSCCTTSCCHHHHHHTHHHHHHHHTCCEEE
T ss_pred CCCcccHHHHHHHHHHHHHhCCCCEEEEEEecCCCCCCCCHHHHHHHHHHHHHHcCCcEEE
Confidence 21 12 356668899999999987765 43332 3556664 456789999998764
No 22
>3tut_A RNA 3'-terminal phosphate cyclase; cyclase family, cyclization of RNA 3'-phosphate ENDS, transf; HET: ATP; 1.58A {Escherichia coli} PDB: 3tux_A* 3tv1_A* 3tw3_A* 3kgd_A* 1qmh_A* 1qmi_A
Probab=95.93 E-value=0.22 Score=46.76 Aligned_cols=116 Identities=16% Similarity=0.151 Sum_probs=72.0
Q ss_pred HHHHHHHhhcCCcEEEeeCCCC-------hhHHHHHHHHHHc-CCEEEEcCCc-cEEEEEcCCCCcccccccCCceEEEe
Q 021126 102 NRILLLAALSEGTTVVDNLLSS-------EDIHHMLDALKKL-GLNVEEDFAM-KRAIVEGCGGLFPLAKQQTGEIELFL 172 (317)
Q Consensus 102 ~r~LlaAaLa~g~t~I~n~~~s-------~dv~~~l~~L~~l-Ga~I~~~~~~-~~l~V~g~~~~~~~~~~~~~~~~i~~ 172 (317)
-..|.+++|++.+++|.|.-.. +.=...++++.++ |++|+..... ..++..+... .. . ....|+
T Consensus 40 R~alaLS~Ltgkpv~I~nIR~~r~~PGL~~qhl~~l~ll~~it~a~veg~~~GSt~l~f~PG~i-~g-g-----~~~~d~ 112 (358)
T 3tut_A 40 RSALSLSMITGQPFTITSIRAGRAKPGLLRQHLTAVKAATEICGATVEGAELGSQRLLFRPGTV-RG-G-----DYRFAI 112 (358)
T ss_dssp HHHHHHHHHHCCCEEEESTTTTSSSCSCCHHHHHHHHHHHHHHTCEEECCSTTCSCEEEECCCC-CC-C-----EEEEEC
T ss_pred HHHHHHHHhhCCCEEEEEecCCCCCccccHHHHHHHHHHHHhhCCEEEEeecCcEEEEEECCCc-cC-c-----eEEEEC
Confidence 4578889999999999986432 2222345555553 8888865432 2577666431 11 1 457788
Q ss_pred cCchhhHHH---HHHHHHHcCCCcEEEEeCCCCCCCCc-hH----HHHHHHHhCCCeEEE
Q 021126 173 GNAGTAMRP---LTAAVTAAGGNLSYILDGVPRMRERP-IG----DLVTGLKQLGADVDC 224 (317)
Q Consensus 173 g~sgta~r~---l~a~la~~~~~~~~~i~G~~~l~~rp-i~----~l~~~L~~lGa~i~~ 224 (317)
+.+++..++ +++++..+..+.+++|+|+.....-| ++ -++-.|++||++++.
T Consensus 113 ~tagSi~l~lq~lLp~~lFa~~p~~l~l~GgTn~~~~psvDy~~~v~lP~l~~fG~~~~l 172 (358)
T 3tut_A 113 GSAGSCTLVLQTVLPALWFADGPSRVEVSGGTDNPSAPPADFIRRVLEPLLAKIGIHQQT 172 (358)
T ss_dssp SSSCBHHHHHHHHHHHHTTSSSCEEEEEEEBSCCTTSCCHHHHHHTHHHHHHHHTCCEEE
T ss_pred CCcccHHHHHHHHHHHHHhCCCCEEEEEEecCCCCCCCCHHHHHHHHHHHHHHcCCcEEE
Confidence 877776664 44443333345678899976554444 32 256778999998654
No 23
>3pqv_A RCL1 protein; RTC-like, cyclase-like, modular, alpha-beta, anion pocket, R biogenesis, unknown function; HET: TAR; 2.61A {Kluyveromyces lactis}
Probab=94.67 E-value=0.24 Score=46.72 Aligned_cols=115 Identities=12% Similarity=0.052 Sum_probs=73.5
Q ss_pred HHHHHHhhcCCcEEEeeCCCCh-------hHHHHHHHHHHc-CCEEEEcC-CccEEEEEcCCCCcccccccCCceEEEec
Q 021126 103 RILLLAALSEGTTVVDNLLSSE-------DIHHMLDALKKL-GLNVEEDF-AMKRAIVEGCGGLFPLAKQQTGEIELFLG 173 (317)
Q Consensus 103 r~LlaAaLa~g~t~I~n~~~s~-------dv~~~l~~L~~l-Ga~I~~~~-~~~~l~V~g~~~~~~~~~~~~~~~~i~~g 173 (317)
..|.+++|++.+++|+|.-..+ .=...+++|+++ +++++... .+..++..+... .. . ...+|++
T Consensus 19 ~alaLS~ltgkpvrI~nIRa~r~~PGL~~qhls~l~ll~~itng~v~g~~~gst~l~F~Pg~i-~g-G-----~~~~d~~ 91 (365)
T 3pqv_A 19 LRVVMATLSGKAIKIEKIRSDDLNPGLKDYEVSFLRLMEAVTNGSSIEISYTGTTVIFRPGII-TG-G-----SYTHQCP 91 (365)
T ss_dssp HHHHHHHHHCCCEEEESSSTTSSSCSCCHHHHHHHHHHHHHEESCEEEECTTSSCEEEECCEE-CC-E-----EEEEECC
T ss_pred HHHHHHHhhCCCEEEEEecCCCCCCCccHHHHHHHHHHHHHhCceEeeeecCCcEEEEECCcc-cC-C-----eEEEECC
Confidence 4677899999999999864332 223466777775 45555432 123566555321 11 1 4578999
Q ss_pred CchhhHHHHHHHHHHc---CCCcEEEEeCCCCCCCCc-hHH----HHHHHHhCCCe-EEE
Q 021126 174 NAGTAMRPLTAAVTAA---GGNLSYILDGVPRMRERP-IGD----LVTGLKQLGAD-VDC 224 (317)
Q Consensus 174 ~sgta~r~l~a~la~~---~~~~~~~i~G~~~l~~rp-i~~----l~~~L~~lGa~-i~~ 224 (317)
.+++..+++.+++.++ ..+.+++|+|+.....-| ++- ++-.|++||++ ++.
T Consensus 92 tagSi~l~l~~lL~~a~f~~~p~~l~l~GgTn~~~sPsvDy~~~v~lP~l~~fG~~~~~l 151 (365)
T 3pqv_A 92 NSKPVGYFAEPMLYLAPFSKKKFSILFRGITSSHNDAGIDAIKWGLMPIMEKFGVRECAL 151 (365)
T ss_dssp TTSCHHHHHGGGGGTGGGSSSCEEEEEEECCCCSSSCCHHHHHHTTHHHHHHTTCCSCEE
T ss_pred CCcchHHHHHHHHHHHhcCCCcEEEEEEcccCCCCCCCHHHHHHHHHHHHHHcCCCeEEE
Confidence 9999998877766543 245678899976555444 322 56779999997 543
No 24
>3pqv_A RCL1 protein; RTC-like, cyclase-like, modular, alpha-beta, anion pocket, R biogenesis, unknown function; HET: TAR; 2.61A {Kluyveromyces lactis}
Probab=93.87 E-value=0.17 Score=47.68 Aligned_cols=122 Identities=15% Similarity=0.162 Sum_probs=74.5
Q ss_pred hhhHHHHHHHHHHcCCCcEEEEeCCCCCCCCc-h----HHHHHHHHhC-CCeEEEeCCCCcccEEEEcCCCCCceEEEeC
Q 021126 176 GTAMRPLTAAVTAAGGNLSYILDGVPRMRERP-I----GDLVTGLKQL-GADVDCILGTNCPPVRINGKGGLPGGKVKLS 249 (317)
Q Consensus 176 gta~r~l~a~la~~~~~~~~~i~G~~~l~~rp-i----~~l~~~L~~l-Ga~i~~~~~~~~~Pi~I~g~~~l~g~~i~l~ 249 (317)
+..+|.-+++.++++ .++.|++.-.-|.+| + -..++.|+++ +++++..+. +..-+...++ .+.|++++.+
T Consensus 14 gQilR~alaLS~ltg--kpvrI~nIRa~r~~PGL~~qhls~l~ll~~itng~v~g~~~-gst~l~F~Pg-~i~gG~~~~d 89 (365)
T 3pqv_A 14 SRNFRLRVVMATLSG--KAIKIEKIRSDDLNPGLKDYEVSFLRLMEAVTNGSSIEISY-TGTTVIFRPG-IITGGSYTHQ 89 (365)
T ss_dssp STTHHHHHHHHHHHC--CCEEEESSSTTSSSCSCCHHHHHHHHHHHHHEESCEEEECT-TSSCEEEECC-EECCEEEEEE
T ss_pred hhHHHHHHHHHHhhC--CCEEEEEecCCCCCCCccHHHHHHHHHHHHHhCceEeeeec-CCcEEEEECC-cccCCeEEEE
Confidence 456777777777753 688888875555555 1 2345566664 556554332 2223777765 7888887765
Q ss_pred CC--CC-HHHHHHHHHHHhcCCCeEEEE--Ecccc---cccchHH-HHHHHHHHcCCE-EEE
Q 021126 250 GK--LS-SQYLTALLMAAPLALGNVEIE--IIDKL---ISVPYVE-MTLKLMERFGVF-VEH 301 (317)
Q Consensus 250 g~--~s-sq~~saLllaA~~a~G~~~I~--~~~~~---~s~~yv~-~t~~~L~~lG~~-v~~ 301 (317)
-. -| .-++.++++.|++++++++|+ +..+. .+.+|+. .++..|++||++ ++.
T Consensus 90 ~~tagSi~l~l~~lL~~a~f~~~p~~l~l~GgTn~~~sPsvDy~~~v~lP~l~~fG~~~~~l 151 (365)
T 3pqv_A 90 CPNSKPVGYFAEPMLYLAPFSKKKFSILFRGITSSHNDAGIDAIKWGLMPIMEKFGVRECAL 151 (365)
T ss_dssp CCTTSCHHHHHGGGGGTGGGSSSCEEEEEEECCCCSSSCCHHHHHHTTHHHHHHTTCCSCEE
T ss_pred CCCCcchHHHHHHHHHHHhcCCCcEEEEEEcccCCCCCCCHHHHHHHHHHHHHHcCCCeEEE
Confidence 21 12 233446777788888886654 44332 3556664 456789999997 553
No 25
>1kkl_H Phosphocarrier protein HPR; phosphorylation, protein kinase, bacteria, protein/protein interaction, transferase; 2.80A {Bacillus subtilis} SCOP: d.94.1.1 PDB: 1kkm_H*
Probab=54.93 E-value=62 Score=24.22 Aligned_cols=35 Identities=20% Similarity=0.266 Sum_probs=29.7
Q ss_pred CcEEEEeCCCCCCCCchHHHHHHHHhCCCeEEEeC
Q 021126 192 NLSYILDGVPRMRERPIGDLVTGLKQLGADVDCIL 226 (317)
Q Consensus 192 ~~~~~i~G~~~l~~rpi~~l~~~L~~lGa~i~~~~ 226 (317)
..+++|.+..-|.-||...+++..+++.++|+...
T Consensus 15 ~~~v~I~n~~GLHARPAa~~v~~A~~f~s~I~i~~ 49 (100)
T 1kkl_H 15 QKTFKVTADSGIHARPATVLVQTASKYDADVNLEY 49 (100)
T ss_dssp CEEEEBCCTTCSCHHHHHHHHHHHHTCSSEEEEEE
T ss_pred EEEEEEcCCCccCHHHHHHHHHHHhhCCCeEEEEE
Confidence 35788888877889999999999999999987654
No 26
>1y51_A Phosphocarrier protein HPR; bacillus stearothermophilus HPR F29W mutant, transport protein; 1.65A {Geobacillus stearothermophilus} PDB: 1y50_A 1y4y_A 2nzu_L* 1rzr_T* 2nzv_L* 2oen_L* 2fep_S* 3oqm_S* 3oqn_S* 3oqo_S*
Probab=46.79 E-value=79 Score=22.81 Aligned_cols=34 Identities=12% Similarity=0.177 Sum_probs=28.5
Q ss_pred cEEEEeCCCCCCCCchHHHHHHHHhCCCeEEEeC
Q 021126 193 LSYILDGVPRMRERPIGDLVTGLKQLGADVDCIL 226 (317)
Q Consensus 193 ~~~~i~G~~~l~~rpi~~l~~~L~~lGa~i~~~~ 226 (317)
.+++|.+..-|.-||...+++..+++.++|....
T Consensus 4 ~~v~i~~~~GlHARpAa~~v~~a~~f~s~I~i~~ 37 (88)
T 1y51_A 4 KTFKVVSDSGIHARPATILVQTASKWNSEIQLEY 37 (88)
T ss_dssp EEEEBCCTTCSCHHHHHHHHHHHHTSSSEEEEEE
T ss_pred EEEEEcCCCCccHHHHHHHHHHHhhCCCeEEEEE
Confidence 4677777777889999999999999999987654
No 27
>4hkm_A Anthranilate phosphoribosyltransferase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; HET: MSE CXS; 1.95A {Xanthomonas campestris PV}
Probab=43.61 E-value=46 Score=30.63 Aligned_cols=85 Identities=19% Similarity=0.182 Sum_probs=45.7
Q ss_pred ChhHHHHHHHHHHcCCEEEEcCCccEEEEEcCCCCcccccccCCceEEEecCchhhHHHHHHHHHHcCCCcEEEEeCCCC
Q 021126 123 SEDIHHMLDALKKLGLNVEEDFAMKRAIVEGCGGLFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDGVPR 202 (317)
Q Consensus 123 s~dv~~~l~~L~~lGa~I~~~~~~~~l~V~g~~~~~~~~~~~~~~~~i~~g~sgta~r~l~a~la~~~~~~~~~i~G~~~ 202 (317)
.+++..+.++|++.|..++..+....+-+.|.++.-. ..+ |.+++.-|++| . ...++...|...
T Consensus 55 ~eEi~g~~~am~~~~~~v~~~~~~~~vD~~gTGGdg~--------~t~---niSt~~a~v~A---a--~G~~V~khG~r~ 118 (346)
T 4hkm_A 55 IGEIAGAATVMREFSRRVEVTDRRHMVDIVGTGGDGS--------HTF---NISTCAMFVAA---A--GGAKVAKHGNRS 118 (346)
T ss_dssp HHHHHHHHHHHHHHSCCCCCSCCTTEEEEECC--------------CC---CHHHHHHHHHH---H--TTCEEEEEC---
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceeecCCCCCCc--------ccc---CcHHHHHHHHH---h--cCCCeeecCCCC
Confidence 4578889999999998887644323556666553111 111 33443323322 2 346888888766
Q ss_pred CCCCchHHHHHHHHhCCCeEEEe
Q 021126 203 MRERPIGDLVTGLKQLGADVDCI 225 (317)
Q Consensus 203 l~~rpi~~l~~~L~~lGa~i~~~ 225 (317)
+..+. --.|.|+.+|+++...
T Consensus 119 ~ss~~--GsaD~LeaLG~~~~ls 139 (346)
T 4hkm_A 119 VSSKS--GSADALEALGAVIELQ 139 (346)
T ss_dssp --------CHHHHHTTTCCCCCC
T ss_pred CCCCc--CHHHHHHHcCCCcccC
Confidence 65552 2468899999988643
No 28
>1pch_A Phosphocarrier protein; phosphotransferase; 1.80A {Mycoplasma capricolum} SCOP: d.94.1.1
Probab=37.28 E-value=1.2e+02 Score=21.99 Aligned_cols=34 Identities=18% Similarity=0.306 Sum_probs=28.4
Q ss_pred cEEEEeCCCCCCCCchHHHHHHHHhCCCeEEEeC
Q 021126 193 LSYILDGVPRMRERPIGDLVTGLKQLGADVDCIL 226 (317)
Q Consensus 193 ~~~~i~G~~~l~~rpi~~l~~~L~~lGa~i~~~~ 226 (317)
.+++|.+..-|.-||...+++..+++.++|....
T Consensus 3 ~~~~i~n~~GLHARPAa~~v~~a~~f~s~I~i~~ 36 (88)
T 1pch_A 3 FSAIITDKVGLHARPASVLAKEASKFSSNITIIA 36 (88)
T ss_dssp EEEECCCTTCSCHHHHHHHHHHHTTCSSEEEEEE
T ss_pred EEEEECCCCCcCHHHHHHHHHHHhhCCCeEEEEE
Confidence 4677777777889999999999999999987654
No 29
>1ka5_A Phosphocarrier protein HPR; open faced beta-sandwich, structural proteomics in europe, spine, structural genomics, ligand transport; NMR {Staphylococcus aureus} SCOP: d.94.1.1 PDB: 1qr5_A 1txe_A
Probab=33.42 E-value=1.3e+02 Score=21.56 Aligned_cols=34 Identities=21% Similarity=0.308 Sum_probs=28.5
Q ss_pred cEEEEeCCCCCCCCchHHHHHHHHhCCCeEEEeC
Q 021126 193 LSYILDGVPRMRERPIGDLVTGLKQLGADVDCIL 226 (317)
Q Consensus 193 ~~~~i~G~~~l~~rpi~~l~~~L~~lGa~i~~~~ 226 (317)
.+++|.+..-+.-||...+++..+++.++|+...
T Consensus 4 ~~v~i~~~~GLHARpAa~~v~~a~~f~s~I~i~~ 37 (88)
T 1ka5_A 4 NSYVIIDETGIHARPATMLVQTASKFDSDIQLEY 37 (88)
T ss_dssp EEEEBCCTTCSCHHHHHHHHHHHHHHSSEEEEEE
T ss_pred EEEEEcCCCCccHHHHHHHHHHHhhCCCeEEEEE
Confidence 3577777777889999999999999999987654
No 30
>3ccd_A Phosphocarrier protein HPR; succinimide, isoaspartate, protein damage, autophosphatase, transferase; 1.00A {Escherichia coli} PDB: 1cm3_A 1cm2_A 1ggr_B 1hdn_A 1j6t_B 1pfh_A* 1poh_A 1vrc_C 2jel_P 2xdf_C 3eza_B 3ezb_B 3eze_B 1opd_A
Probab=30.94 E-value=1.2e+02 Score=21.64 Aligned_cols=34 Identities=12% Similarity=0.223 Sum_probs=28.4
Q ss_pred cEEEEeCCCCCCCCchHHHHHHHHhCCCeEEEeC
Q 021126 193 LSYILDGVPRMRERPIGDLVTGLKQLGADVDCIL 226 (317)
Q Consensus 193 ~~~~i~G~~~l~~rpi~~l~~~L~~lGa~i~~~~ 226 (317)
.+++|.+..-+.-||...+++..+++.++|....
T Consensus 4 ~~v~i~n~~GlHARpAa~~v~~a~~f~s~I~i~~ 37 (85)
T 3ccd_A 4 QEVTITAPNGLDTRPAAQFVKEAKGFTSEITVTS 37 (85)
T ss_dssp EEEECCSTTCSCHHHHHHHHHHHTTSCSEEEEEE
T ss_pred EEEEEcCCCCccHHHHHHHHHHHhhCCCeEEEEE
Confidence 3577777777889999999999999999987654
No 31
>2elc_A Trp D, anthranilate phosphoribosyltransferase; structural genomics, NPPSFA, national project O structural and functional analyses; 1.55A {Thermus thermophilus} SCOP: a.46.2.1 c.27.1.1 PDB: 1v8g_A
Probab=29.82 E-value=85 Score=28.65 Aligned_cols=148 Identities=16% Similarity=0.156 Sum_probs=80.3
Q ss_pred ChhHHHHHHHHHHcCCEEEEcCCccEEEEEcCCCCcccccccCCceEEEecCchhhHHHHHHHHHHcCCCcEEEEeCCCC
Q 021126 123 SEDIHHMLDALKKLGLNVEEDFAMKRAIVEGCGGLFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDGVPR 202 (317)
Q Consensus 123 s~dv~~~l~~L~~lGa~I~~~~~~~~l~V~g~~~~~~~~~~~~~~~~i~~g~sgta~r~l~a~la~~~~~~~~~i~G~~~ 202 (317)
.+++..+.++|++.+..+.++.. ..+-+.|.++.- ...+ |-+|++-|++| . ..-++...|...
T Consensus 49 ~~Eiag~~~am~~~~~~~~~~~~-~~vD~~gTGGdg--------~~tf---NiSt~~a~v~A---a--~Gv~V~kHGnr~ 111 (329)
T 2elc_A 49 PHEIAAMARAMREAARPLRVHRR-PLLDIVGTGGDG--------KGLM---NLSTLAALVAA---A--GGVAVAKHGNRA 111 (329)
T ss_dssp HHHHHHHHHHHHHHSCCCCCCCS-SEEEEEECCCCS--------SCCC---CCHHHHHHHHH---H--TTCEEEEEECCC
T ss_pred HHHHHHHHHHHHHhCCCCCCCCC-CeeEEcCCCCCC--------CCcc---ccHHHHHHHHH---h--CCCCEEEeCCCC
Confidence 46788999999999988866422 256666665421 1122 43444434333 2 346888999877
Q ss_pred CCCCchHHHHHHHHhCCCeEEEeCC--------CCcccEEEEcCCCCCceEEEeCCCCCHHH--HHHHHHHHhcCC---C
Q 021126 203 MRERPIGDLVTGLKQLGADVDCILG--------TNCPPVRINGKGGLPGGKVKLSGKLSSQY--LTALLMAAPLAL---G 269 (317)
Q Consensus 203 l~~rpi~~l~~~L~~lGa~i~~~~~--------~~~~Pi~I~g~~~l~g~~i~l~g~~ssq~--~saLllaA~~a~---G 269 (317)
+..+-= ..|.|+.+|+++....+ .++ ..+..+ .+.+..=.+- ..-.+. -+.+=+++++.. .
T Consensus 112 ~ss~~G--saDvLeaLG~~~~~~~~~~~~~l~~~g~--~fl~a~-~~hPa~k~~~-~~R~~lg~rTvfn~lgpL~nPa~~ 185 (329)
T 2elc_A 112 ASSRAG--SADLLEALGVDLEAPPERVGEAIEELGF--GFLFAR-VFHPAMRHVA-PVRAELGVRTVFNLLGPLTNPAGA 185 (329)
T ss_dssp TTTTCS--HHHHHHHTTCCTTCCHHHHHHHHHHHSE--EEEEHH-HHCGGGGGTH-HHHHHHCSCCHHHHHTTTCCTTCC
T ss_pred CCCccc--HHHHHHhCCCCCCCCHHHHHHHHHHCCE--EEEEhH-HhCHHHHHHH-HHHHHhCCCCHHHHHHHhcCccCC
Confidence 766532 46889999998753321 121 223222 2332210000 000011 122334455543 3
Q ss_pred eEEEEEcccccccchHHHHHHHHHHcC
Q 021126 270 NVEIEIIDKLISVPYVEMTLKLMERFG 296 (317)
Q Consensus 270 ~~~I~~~~~~~s~~yv~~t~~~L~~lG 296 (317)
+..+.+. .+.+|...+.+.|+++|
T Consensus 186 ~~~v~Gv---~~~~~~~~~a~~l~~lG 209 (329)
T 2elc_A 186 DAYVLGV---FSPEWLAPMAEALERLG 209 (329)
T ss_dssp CEEEEEC---SSGGGHHHHHHHHHHTT
T ss_pred ceeEEee---eCHHHHHHHHHHHHHcC
Confidence 4455543 46788889999999998
No 32
>1sph_A Histidine-containing phosphocarrier protein HPR; phosphotransferase; 2.00A {Bacillus subtilis} SCOP: d.94.1.1 PDB: 1jem_A* 2hid_A 2hpr_A
Probab=27.27 E-value=1.7e+02 Score=20.91 Aligned_cols=34 Identities=21% Similarity=0.267 Sum_probs=28.5
Q ss_pred cEEEEeCCCCCCCCchHHHHHHHHhCCCeEEEeC
Q 021126 193 LSYILDGVPRMRERPIGDLVTGLKQLGADVDCIL 226 (317)
Q Consensus 193 ~~~~i~G~~~l~~rpi~~l~~~L~~lGa~i~~~~ 226 (317)
.+++|.+..-|.-||...+++..+++.++|....
T Consensus 4 ~~v~i~~~~GLHARpAa~~v~~a~~f~s~I~i~~ 37 (88)
T 1sph_A 4 KTFKVTADSGIHARPATVLVQTASKYDADVNLEY 37 (88)
T ss_dssp EEEEBCCTTCSCHHHHHHHHHHHTTSSSEEEEEE
T ss_pred EEEEEcCCCCccHHHHHHHHHHHhhCCCeEEEEE
Confidence 4677787777889999999999999999987654
No 33
>1ptf_A Histidine-containing phosphocarrier protein HPR; phosphotransferase; 1.60A {Enterococcus faecalis} SCOP: d.94.1.1 PDB: 1qfr_A 1fu0_A*
Probab=26.36 E-value=1.8e+02 Score=20.83 Aligned_cols=34 Identities=15% Similarity=0.238 Sum_probs=27.8
Q ss_pred cEEEEeCCCCCCCCchHHHHHHHHhCCCeEEEeC
Q 021126 193 LSYILDGVPRMRERPIGDLVTGLKQLGADVDCIL 226 (317)
Q Consensus 193 ~~~~i~G~~~l~~rpi~~l~~~L~~lGa~i~~~~ 226 (317)
.+++|.+..-|.-||...+++..+++.++|....
T Consensus 4 ~~v~i~~~~GLHARpAa~~v~~a~~f~s~I~i~~ 37 (88)
T 1ptf_A 4 KEFHIVAETGIHARPATLLVQTASKFNSDINLEY 37 (88)
T ss_dssp EEEECCCTTCSCHHHHHHHHHHHTTCSSEEEEEE
T ss_pred EEEEECCCCCcCHHHHHHHHHHHhhCCCeEEEEE
Confidence 3567777667888999999999999999987654
No 34
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=24.84 E-value=82 Score=20.55 Aligned_cols=26 Identities=31% Similarity=0.375 Sum_probs=20.7
Q ss_pred HHHHHHHHHcCC---EEEEcCCccEEEEEcC
Q 021126 127 HHMLDALKKLGL---NVEEDFAMKRAIVEGC 154 (317)
Q Consensus 127 ~~~l~~L~~lGa---~I~~~~~~~~l~V~g~ 154 (317)
..+++++..+|. +|.|+++ +++|+|.
T Consensus 21 ailikvfaelgyndinvtwdgd--tvtvegq 49 (62)
T 2gjh_A 21 AILIKVFAELGYNDINVTWDGD--TVTVEGQ 49 (62)
T ss_dssp HHHHHHHHHTTCCSCEEEECSS--CEEEEEE
T ss_pred HHHHHHHHHhCcccceeEEcCC--EEEEEeE
Confidence 457788899984 6889986 8999875
No 35
>3ihs_A Phosphocarrier protein HPR; dimerization domain SWAP beta strand, IDP01131, structural genomics; HET: MSE; 1.15A {Bacillus anthracis} PDB: 1zvv_W* 1mo1_A 1mu4_A 2rlz_A 2ak7_A* 1k1c_A
Probab=20.85 E-value=2.7e+02 Score=20.88 Aligned_cols=34 Identities=15% Similarity=0.075 Sum_probs=28.5
Q ss_pred cEEEEeCCCCCCCCchHHHHHHHHhCCCeEEEeC
Q 021126 193 LSYILDGVPRMRERPIGDLVTGLKQLGADVDCIL 226 (317)
Q Consensus 193 ~~~~i~G~~~l~~rpi~~l~~~L~~lGa~i~~~~ 226 (317)
.+++|.+..-|.-||...+++..+++.++|....
T Consensus 28 ~~v~I~n~~GLHARPAa~~V~~A~~f~s~I~i~~ 61 (106)
T 3ihs_A 28 KRVQVSLKNGLQARPAALFVQEANRFHADIFIEK 61 (106)
T ss_dssp EEEECCCTTCSCHHHHHHHHHHHHTSSSEEEEEE
T ss_pred EEEEEeCCCCCcHHHHHHHHHHHhhCCCeEEEEE
Confidence 5677877777788999999999999999887654
No 36
>3r88_A Anthranilate phosphoribosyltransferase; anthranilic acids, M tryptophan, inhibitor, magnesium binding phosp pyrophosphate; HET: PRP 14F; 1.73A {Mycobacterium tuberculosis} PDB: 3qqs_A 3qs8_A* 3qsa_A* 3qr9_A* 3r6c_A* 3twp_A* 1zvw_A* 2bpq_A
Probab=20.41 E-value=1.1e+02 Score=28.48 Aligned_cols=85 Identities=16% Similarity=0.125 Sum_probs=52.0
Q ss_pred ChhHHHHHHHHHHcCCEEEEcCC-ccEEEEEcCCCCcccccccCCceEEEecCchhhHHHHHHHHHHcCCCcEEEEeCCC
Q 021126 123 SEDIHHMLDALKKLGLNVEEDFA-MKRAIVEGCGGLFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDGVP 201 (317)
Q Consensus 123 s~dv~~~l~~L~~lGa~I~~~~~-~~~l~V~g~~~~~~~~~~~~~~~~i~~g~sgta~r~l~a~la~~~~~~~~~i~G~~ 201 (317)
.+++..+.++|++.+..+..+.. ...+.+.|.++.-. ..+ |.+++.-|++| . ...++...|..
T Consensus 75 ~eEi~g~~~am~~~~~~v~~~~~~~~~vD~~gTGGdg~--------~T~---niSt~~A~v~A---a--~Gv~VaKHGnR 138 (377)
T 3r88_A 75 ADEVGELAGVMLSHAHPLPADTVPDDAVDVVGTGGDGV--------NTV---NLSTMAAIVVA---A--AGVPVVKHGNR 138 (377)
T ss_dssp HHHHHHHHHHHHHHSCCCCTTCSCTTCEEEEECCCCSC--------CBC---CHHHHHHHHHH---H--TTCCEEEEECC
T ss_pred HHHHHHHHHHHHHhCCcCCCccCCCCCeEEeCCCCCCc--------Ccc---ccHHHHHHHHH---h--cCCeEEeECCC
Confidence 45788899999999988765421 12456666553111 112 34444333333 2 34688888887
Q ss_pred CCCCCchHHHHHHHHhCCCeEEEe
Q 021126 202 RMRERPIGDLVTGLKQLGADVDCI 225 (317)
Q Consensus 202 ~l~~rpi~~l~~~L~~lGa~i~~~ 225 (317)
.+..+-= ..|.|+.+|+++...
T Consensus 139 ~~ss~~G--saDvLEaLGv~~~l~ 160 (377)
T 3r88_A 139 AASSLSG--GADTLEALGVRIDLG 160 (377)
T ss_dssp CSSSSCC--HHHHHHHTTCCCCCC
T ss_pred CCCCccc--HHHHHHHcCCCcccc
Confidence 7776632 357889999988643
Done!