BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021127
(317 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 121/270 (44%), Gaps = 44/270 (16%)
Query: 21 IDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSR 80
ID L + IG G KVY + VA+K + + E+I++ +E + +
Sbjct: 4 IDFAELTLEEIIGIGGFGKVYRAFWIGDEVAVK-AARHDPDEDISQTIENVRQEAKLFAM 62
Query: 81 VQHRNLVKFIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAME 139
++H N++ G C KEP + +V E GG L + L R + + + +A+ IAR M
Sbjct: 63 LKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKR---IPPDILVNWAVQIARGMN 119
Query: 140 CLHSHGI---IHRDLKPENLLLTEDL-------KTIKLADFGLAREESLTEMMTAETGTY 189
LH I IHRDLK N+L+ + + K +K+ DFGLARE T M+A G Y
Sbjct: 120 YLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSA-AGAY 178
Query: 190 RWMAPELYSTVTLRQG-EKKHYN---------------------------HKNVRPSAEN 221
WMAPE+ +G + Y +K P
Sbjct: 179 AWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPST 238
Query: 222 VPEELSIILTSCWKEDPNARPNFTQIIQML 251
PE + ++ CW DP++RP+FT I+ L
Sbjct: 239 CPEPFAKLMEDCWNPDPHSRPSFTNILDQL 268
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 125/269 (46%), Gaps = 43/269 (15%)
Query: 20 LIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLS 79
+ID K + V +G GA V + K++ + VAIK + E + F E+ LS
Sbjct: 5 MIDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQI-------ESESERKAFIVELRQLS 57
Query: 80 RVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCV-AIGFALDIARAM 138
RV H N+VK GAC PV +V E GG+L L P A+ + L ++ +
Sbjct: 58 RVNHPNIVKLYGACLNPV-CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGV 116
Query: 139 ECLHS---HGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPE 195
LHS +IHRDLKP NLLL +K+ DFG A + + MT G+ WMAPE
Sbjct: 117 AYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD--IQTHMTNNKGSAAWMAPE 174
Query: 196 LYSTVTLRQ---------------GEKKHYN-------------HKNVRPS-AENVPEEL 226
++ + +K ++ H RP +N+P+ +
Sbjct: 175 VFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPI 234
Query: 227 SIILTSCWKEDPNARPNFTQIIQMLLNYL 255
++T CW +DP+ RP+ +I++++ + +
Sbjct: 235 ESLMTRCWSKDPSQRPSMEEIVKIMTHLM 263
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 125/269 (46%), Gaps = 43/269 (15%)
Query: 20 LIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLS 79
+ID K + V +G GA V + K++ + VAIK + E + F E+ LS
Sbjct: 4 MIDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQI-------ESESERKAFIVELRQLS 56
Query: 80 RVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCV-AIGFALDIARAM 138
RV H N+VK GAC PV +V E GG+L L P A+ + L ++ +
Sbjct: 57 RVNHPNIVKLYGACLNPV-CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGV 115
Query: 139 ECLHS---HGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPE 195
LHS +IHRDLKP NLLL +K+ DFG A + + MT G+ WMAPE
Sbjct: 116 AYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD--IQTHMTNNKGSAAWMAPE 173
Query: 196 LYSTVTLRQ---------------GEKKHYN-------------HKNVRPS-AENVPEEL 226
++ + +K ++ H RP +N+P+ +
Sbjct: 174 VFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPI 233
Query: 227 SIILTSCWKEDPNARPNFTQIIQMLLNYL 255
++T CW +DP+ RP+ +I++++ + +
Sbjct: 234 ESLMTRCWSKDPSQRPSMEEIVKIMTHLM 262
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 136/269 (50%), Gaps = 37/269 (13%)
Query: 26 LFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
L + +IG G+ V+ ++ VA+KI+ + + A++ + F REVA++ R++H N
Sbjct: 39 LNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFH---AERVNEFLREVAIMKRLRHPN 95
Query: 86 LVKFIGACKEPV-MVIVTELLSGGTLRKYLLNMRPR-CLDVCVAIGFALDIARAMECLHS 143
+V F+GA +P + IVTE LS G+L + L R LD + A D+A+ M LH+
Sbjct: 96 IVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN 155
Query: 144 HG--IIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMT-AETGTYRWMAPE----- 195
I+HR+LK NLL+ + T+K+ DFGL+R ++ T + + + GT WMAPE
Sbjct: 156 RNPPIVHRNLKSPNLLVDKKY-TVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDE 214
Query: 196 -------LYS-TVTLRQGEKKHYNHKNVRPSA---------------ENVPEELSIILTS 232
+YS V L + N+ P+ N+ +++ I+
Sbjct: 215 PSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEG 274
Query: 233 CWKEDPNARPNFTQIIQMLLNYLSAIAPP 261
CW +P RP+F I+ +L + + PP
Sbjct: 275 CWTNEPWKRPSFATIMDLLRPLIKSAVPP 303
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 134/269 (49%), Gaps = 37/269 (13%)
Query: 26 LFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
L + +IG G+ V+ ++ VA+KI+ + + A++ + F REVA++ R++H N
Sbjct: 39 LNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFH---AERVNEFLREVAIMKRLRHPN 95
Query: 86 LVKFIGACKEPV-MVIVTELLSGGTLRKYLLNMRPR-CLDVCVAIGFALDIARAMECLHS 143
+V F+GA +P + IVTE LS G+L + L R LD + A D+A+ M LH+
Sbjct: 96 IVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN 155
Query: 144 HG--IIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMT-AETGTYRWMAPE----- 195
I+HRDLK NLL+ + T+K+ DFGL+R ++ + + GT WMAPE
Sbjct: 156 RNPPIVHRDLKSPNLLVDKKY-TVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDE 214
Query: 196 -------LYS-TVTLRQGEKKHYNHKNVRPSA---------------ENVPEELSIILTS 232
+YS V L + N+ P+ N+ +++ I+
Sbjct: 215 PSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEG 274
Query: 233 CWKEDPNARPNFTQIIQMLLNYLSAIAPP 261
CW +P RP+F I+ +L + + PP
Sbjct: 275 CWTNEPWKRPSFATIMDLLRPLIKSAVPP 303
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 130/286 (45%), Gaps = 46/286 (16%)
Query: 2 ESRSRFYLADELKLDAKWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVH-KGET 60
E R+R W I + VG RIG G+ VY+GK+ VA+K+++ T
Sbjct: 14 EDRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPT 72
Query: 61 PEEIAKKESRFAREVAMLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPR 120
P+++ F EV +L + +H N++ F+G +P + IVT+ G +L +L + +
Sbjct: 73 PQQLQA----FKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK 128
Query: 121 CLDVCVAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESL-- 178
++ I A A+ M+ LH+ IIHRDLK N+ L EDL T+K+ DFGLA E+S
Sbjct: 129 -FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDL-TVKIGDFGLATEKSRWS 186
Query: 179 -TEMMTAETGTYRWMAPEL-------------------------------YSTVTLRQG- 205
+ +G+ WMAPE+ YS + R
Sbjct: 187 GSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 246
Query: 206 ---EKKHYNHKNVRPSAENVPEELSIILTSCWKEDPNARPNFTQII 248
+ Y ++ N P+ + ++ C K+ + RP F QI+
Sbjct: 247 IFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 292
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 126/269 (46%), Gaps = 46/269 (17%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVH-KGETPEEIAKKESRFAREVAM 77
W I + VG RIG G+ VY+GK+ VA+K+++ TP+++ F EV +
Sbjct: 23 WEIPDGQITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQA----FKNEVGV 77
Query: 78 LSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARA 137
L + +H N++ F+G +P + IVT+ G +L +L + + ++ I A A+
Sbjct: 78 LRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQG 136
Query: 138 MECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESL---TEMMTAETGTYRWMAP 194
M+ LH+ IIHRDLK N+ L EDL T+K+ DFGLA E+S + +G+ WMAP
Sbjct: 137 MDYLHAKSIIHRDLKSNNIFLHEDL-TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP 195
Query: 195 EL-------------------------------YSTVTLRQG----EKKHYNHKNVRPSA 219
E+ YS + R + Y ++
Sbjct: 196 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVR 255
Query: 220 ENVPEELSIILTSCWKEDPNARPNFTQII 248
N P+ + ++ C K+ + RP F QI+
Sbjct: 256 SNCPKAMKRLMAECLKKKRDERPLFPQIL 284
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 126/269 (46%), Gaps = 46/269 (17%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVH-KGETPEEIAKKESRFAREVAM 77
W I + VG RIG G+ VY+GK+ VA+K+++ TP+++ F EV +
Sbjct: 3 WEIPDGQITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQA----FKNEVGV 57
Query: 78 LSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARA 137
L + +H N++ F+G +P + IVT+ G +L +L + + ++ I A A+
Sbjct: 58 LRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQG 116
Query: 138 MECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESL---TEMMTAETGTYRWMAP 194
M+ LH+ IIHRDLK N+ L EDL T+K+ DFGLA E+S + +G+ WMAP
Sbjct: 117 MDYLHAKSIIHRDLKSNNIFLHEDL-TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP 175
Query: 195 EL-------------------------------YSTVTLRQG----EKKHYNHKNVRPSA 219
E+ YS + R + Y ++
Sbjct: 176 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVR 235
Query: 220 ENVPEELSIILTSCWKEDPNARPNFTQII 248
N P+ + ++ C K+ + RP F QI+
Sbjct: 236 SNCPKAMKRLMAECLKKKRDERPLFPQIL 264
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 107 bits (268), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 130/271 (47%), Gaps = 52/271 (19%)
Query: 18 KWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAM 77
KW ++ + + ++G G + +VYEG +K ++ + + +T +E + F +E A+
Sbjct: 12 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAV----KTLKEDTMEVEEFLKEAAV 67
Query: 78 LSRVQHRNLVKFIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+ ++H NLV+ +G C +EP I+TE ++ G L YL + ++ V + A I+
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 127
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGT-------- 188
AME L IHRDL N L+ E+ +K+ADFGL+R +MT +T T
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVGEN-HLVKVADFGLSR------LMTGDTXTAHAGAKFP 180
Query: 189 YRWMAPEL-----------------------------YSTVTLRQ-GEKKHYNHKNVRPS 218
+W APE Y + L Q E +++ RP
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP- 239
Query: 219 AENVPEELSIILTSCWKEDPNARPNFTQIIQ 249
E PE++ ++ +CW+ +P+ RP+F +I Q
Sbjct: 240 -EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 269
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 107 bits (268), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 125/269 (46%), Gaps = 46/269 (17%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVH-KGETPEEIAKKESRFAREVAM 77
W I + VG RIG G+ VY+GK+ VA+K+++ TP+++ F EV +
Sbjct: 19 WEIPDGQITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQA----FKNEVGV 73
Query: 78 LSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARA 137
L + +H N++ F+G +P + IVT+ G +L +L + ++ I A AR
Sbjct: 74 LRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARG 132
Query: 138 MECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESL---TEMMTAETGTYRWMAP 194
M+ LH+ IIHRDLK N+ L ED T+K+ DFGLA E+S + +G+ WMAP
Sbjct: 133 MDYLHAKSIIHRDLKSNNIFLHED-NTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP 191
Query: 195 EL-------------------------------YSTVTLRQGEKKHYNHKNVRPS----A 219
E+ YS + R + ++ P
Sbjct: 192 EVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVR 251
Query: 220 ENVPEELSIILTSCWKEDPNARPNFTQII 248
N P+ + ++ C K+ + RP+F +I+
Sbjct: 252 SNCPKRMKRLMAECLKKKRDERPSFPRIL 280
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 130/271 (47%), Gaps = 52/271 (19%)
Query: 18 KWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAM 77
KW ++ + + ++G G + +VYEG +K ++ + + +T +E + F +E A+
Sbjct: 20 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAV----KTLKEDTMEVEEFLKEAAV 75
Query: 78 LSRVQHRNLVKFIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+ ++H NLV+ +G C +EP I+TE ++ G L YL + ++ V + A I+
Sbjct: 76 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 135
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGT-------- 188
AME L IHRDL N L+ E+ +K+ADFGL+R +MT +T T
Sbjct: 136 AMEYLEKKNFIHRDLAARNCLVGEN-HLVKVADFGLSR------LMTGDTYTAHAGAKFP 188
Query: 189 YRWMAPEL-----------------------------YSTVTLRQ-GEKKHYNHKNVRPS 218
+W APE Y + L Q E +++ RP
Sbjct: 189 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP- 247
Query: 219 AENVPEELSIILTSCWKEDPNARPNFTQIIQ 249
E PE++ ++ +CW+ +P+ RP+F +I Q
Sbjct: 248 -EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 277
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 130/271 (47%), Gaps = 52/271 (19%)
Query: 18 KWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAM 77
KW ++ + + ++G G + +VYEG +K ++ + + +T +E + F +E A+
Sbjct: 8 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAV----KTLKEDTMEVEEFLKEAAV 63
Query: 78 LSRVQHRNLVKFIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+ ++H NLV+ +G C +EP I+TE ++ G L YL + ++ V + A I+
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 123
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGT-------- 188
AME L IHRDL N L+ E+ +K+ADFGL+R +MT +T T
Sbjct: 124 AMEYLEKKNFIHRDLAARNCLVGEN-HLVKVADFGLSR------LMTGDTYTAPAGAKFP 176
Query: 189 YRWMAPEL-----------------------------YSTVTLRQ-GEKKHYNHKNVRPS 218
+W APE Y + L Q E +++ RP
Sbjct: 177 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP- 235
Query: 219 AENVPEELSIILTSCWKEDPNARPNFTQIIQ 249
E PE++ ++ +CW+ +P+ RP+F +I Q
Sbjct: 236 -EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 265
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 130/271 (47%), Gaps = 52/271 (19%)
Query: 18 KWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAM 77
KW ++ + + ++G G + +VYEG +K ++ + + +T +E + F +E A+
Sbjct: 9 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAV----KTLKEDTMEVEEFLKEAAV 64
Query: 78 LSRVQHRNLVKFIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+ ++H NLV+ +G C +EP I+TE ++ G L YL + ++ V + A I+
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGT-------- 188
AME L IHRDL N L+ E+ +K+ADFGL+R +MT +T T
Sbjct: 125 AMEYLEKKNFIHRDLAARNCLVGEN-HLVKVADFGLSR------LMTGDTYTAPAGAKFP 177
Query: 189 YRWMAPEL-----------------------------YSTVTLRQ-GEKKHYNHKNVRPS 218
+W APE Y + L Q E +++ RP
Sbjct: 178 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP- 236
Query: 219 AENVPEELSIILTSCWKEDPNARPNFTQIIQ 249
E PE++ ++ +CW+ +P+ RP+F +I Q
Sbjct: 237 -EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 266
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 130/271 (47%), Gaps = 52/271 (19%)
Query: 18 KWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAM 77
KW ++ + + ++G G + +VYEG +K ++ + + +T +E + F +E A+
Sbjct: 12 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAV----KTLKEDTMEVEEFLKEAAV 67
Query: 78 LSRVQHRNLVKFIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+ ++H NLV+ +G C +EP I+TE ++ G L YL + ++ V + A I+
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 127
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGT-------- 188
AME L IHRDL N L+ E+ +K+ADFGL+R +MT +T T
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVGEN-HLVKVADFGLSR------LMTGDTYTAHAGAKFP 180
Query: 189 YRWMAPEL-----------------------------YSTVTLRQ-GEKKHYNHKNVRPS 218
+W APE Y + L Q E +++ RP
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP- 239
Query: 219 AENVPEELSIILTSCWKEDPNARPNFTQIIQ 249
E PE++ ++ +CW+ +P+ RP+F +I Q
Sbjct: 240 -EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 269
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 107 bits (267), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 130/271 (47%), Gaps = 52/271 (19%)
Query: 18 KWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAM 77
KW ++ + + ++G G + +VYEG +K ++ + + +T +E + F +E A+
Sbjct: 9 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAV----KTLKEDTMEVEEFLKEAAV 64
Query: 78 LSRVQHRNLVKFIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+ ++H NLV+ +G C +EP I+TE ++ G L YL + ++ V + A I+
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGT-------- 188
AME L IHRDL N L+ E+ +K+ADFGL+R +MT +T T
Sbjct: 125 AMEYLEKKNFIHRDLAARNCLVGEN-HLVKVADFGLSR------LMTGDTYTAHAGAKFP 177
Query: 189 YRWMAPEL-----------------------------YSTVTLRQ-GEKKHYNHKNVRPS 218
+W APE Y + L Q E +++ RP
Sbjct: 178 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP- 236
Query: 219 AENVPEELSIILTSCWKEDPNARPNFTQIIQ 249
E PE++ ++ +CW+ +P+ RP+F +I Q
Sbjct: 237 -EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 266
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 107 bits (267), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 130/271 (47%), Gaps = 52/271 (19%)
Query: 18 KWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAM 77
KW ++ + + ++G G + +VYEG +K ++ + + +T +E + F +E A+
Sbjct: 12 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAV----KTLKEDTMEVEEFLKEAAV 67
Query: 78 LSRVQHRNLVKFIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+ ++H NLV+ +G C +EP I+TE ++ G L YL + ++ V + A I+
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 127
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGT-------- 188
AME L IHRDL N L+ E+ +K+ADFGL+R +MT +T T
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVGEN-HLVKVADFGLSR------LMTGDTYTAHAGAKFP 180
Query: 189 YRWMAPEL-----------------------------YSTVTLRQ-GEKKHYNHKNVRPS 218
+W APE Y + L Q E +++ RP
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP- 239
Query: 219 AENVPEELSIILTSCWKEDPNARPNFTQIIQ 249
E PE++ ++ +CW+ +P+ RP+F +I Q
Sbjct: 240 -EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 269
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 107 bits (267), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 130/271 (47%), Gaps = 52/271 (19%)
Query: 18 KWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAM 77
KW ++ + + ++G G + +VYEG +K ++ + + +T +E + F +E A+
Sbjct: 9 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAV----KTLKEDTMEVEEFLKEAAV 64
Query: 78 LSRVQHRNLVKFIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+ ++H NLV+ +G C +EP I+TE ++ G L YL + ++ V + A I+
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGT-------- 188
AME L IHRDL N L+ E+ +K+ADFGL+R +MT +T T
Sbjct: 125 AMEYLEKKNFIHRDLAARNCLVGEN-HLVKVADFGLSR------LMTGDTYTAHAGAKFP 177
Query: 189 YRWMAPEL-----------------------------YSTVTLRQ-GEKKHYNHKNVRPS 218
+W APE Y + L Q E +++ RP
Sbjct: 178 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP- 236
Query: 219 AENVPEELSIILTSCWKEDPNARPNFTQIIQ 249
E PE++ ++ +CW+ +P+ RP+F +I Q
Sbjct: 237 -EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 266
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 107 bits (267), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 130/271 (47%), Gaps = 52/271 (19%)
Query: 18 KWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAM 77
KW ++ + + ++G G + +VYEG +K ++ + + +T +E + F +E A+
Sbjct: 11 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAV----KTLKEDTMEVEEFLKEAAV 66
Query: 78 LSRVQHRNLVKFIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+ ++H NLV+ +G C +EP I+TE ++ G L YL + ++ V + A I+
Sbjct: 67 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 126
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGT-------- 188
AME L IHRDL N L+ E+ +K+ADFGL+R +MT +T T
Sbjct: 127 AMEYLEKKNFIHRDLAARNCLVGEN-HLVKVADFGLSR------LMTGDTYTAHAGAKFP 179
Query: 189 YRWMAPEL-----------------------------YSTVTLRQ-GEKKHYNHKNVRPS 218
+W APE Y + L Q E +++ RP
Sbjct: 180 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP- 238
Query: 219 AENVPEELSIILTSCWKEDPNARPNFTQIIQ 249
E PE++ ++ +CW+ +P+ RP+F +I Q
Sbjct: 239 -EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 268
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 107 bits (267), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 130/271 (47%), Gaps = 52/271 (19%)
Query: 18 KWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAM 77
KW ++ + + ++G G + +VYEG +K ++ + + +T +E + F +E A+
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAV----KTLKEDTMEVEEFLKEAAV 62
Query: 78 LSRVQHRNLVKFIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+ ++H NLV+ +G C +EP I+TE ++ G L YL + ++ V + A I+
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 122
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGT-------- 188
AME L IHRDL N L+ E+ +K+ADFGL+R +MT +T T
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGEN-HLVKVADFGLSR------LMTGDTYTAHAGAKFP 175
Query: 189 YRWMAPEL-----------------------------YSTVTLRQ-GEKKHYNHKNVRPS 218
+W APE Y + L Q E +++ RP
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP- 234
Query: 219 AENVPEELSIILTSCWKEDPNARPNFTQIIQ 249
E PE++ ++ +CW+ +P+ RP+F +I Q
Sbjct: 235 -EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 133/274 (48%), Gaps = 49/274 (17%)
Query: 13 LKLDAKWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFA 72
+ LD KW ++ + + ++G G + +VYEG +K ++ + + +T +E + F
Sbjct: 1 MSLD-KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAV----KTLKEDTMEVEEFL 55
Query: 73 REVAMLSRVQHRNLVKFIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFA 131
+E A++ ++H NLV+ +G C +EP I+TE ++ G L YL + + V + A
Sbjct: 56 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMA 115
Query: 132 LDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGT--- 188
I+ AME L IHRDL N L+ E+ +K+ADFGL+R +MT +T T
Sbjct: 116 TQISSAMEYLEKKNFIHRDLAARNCLVGEN-HLVKVADFGLSR------LMTGDTFTAHA 168
Query: 189 -----YRWMAPE--LYSTVTLRQG---------EKKHYN---HKNVRPSA---------- 219
+W APE Y+ +++ E Y + + PS
Sbjct: 169 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYR 228
Query: 220 ----ENVPEELSIILTSCWKEDPNARPNFTQIIQ 249
E PE++ ++ +CW+ +P+ RP+F +I Q
Sbjct: 229 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 262
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 130/271 (47%), Gaps = 52/271 (19%)
Query: 18 KWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAM 77
KW ++ + + ++G G + +VYEG +K ++ + + +T +E + F +E A+
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAV----KTLKEDTMEVEEFLKEAAV 62
Query: 78 LSRVQHRNLVKFIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+ ++H NLV+ +G C +EP I+TE ++ G L YL + ++ V + A I+
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 122
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGT-------- 188
AME L IHRDL N L+ E+ +K+ADFGL+R +MT +T T
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGEN-HLVKVADFGLSR------LMTGDTYTAHAGAKFP 175
Query: 189 YRWMAPEL-----------------------------YSTVTLRQ-GEKKHYNHKNVRPS 218
+W APE Y + L Q E +++ RP
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP- 234
Query: 219 AENVPEELSIILTSCWKEDPNARPNFTQIIQ 249
E PE++ ++ +CW+ +P+ RP+F +I Q
Sbjct: 235 -EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 129/271 (47%), Gaps = 52/271 (19%)
Query: 18 KWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAM 77
KW ++ + + ++G G + +VYEG +K ++ + + +T +E + F +E A+
Sbjct: 12 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAV----KTLKEDTMEVEEFLKEAAV 67
Query: 78 LSRVQHRNLVKFIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+ ++H NLV+ +G C +EP I+TE ++ G L YL + + V + A I+
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 127
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGT-------- 188
AME L IHRDL N L+ E+ +K+ADFGL+R +MT +T T
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVGEN-HLVKVADFGLSR------LMTGDTYTAHAGAKFP 180
Query: 189 YRWMAPEL-----------------------------YSTVTLRQ-GEKKHYNHKNVRPS 218
+W APE Y + L Q E +++ RP
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP- 239
Query: 219 AENVPEELSIILTSCWKEDPNARPNFTQIIQ 249
E PE++ ++ +CW+ +P+ RP+F +I Q
Sbjct: 240 -EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 269
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 124/269 (46%), Gaps = 46/269 (17%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVH-KGETPEEIAKKESRFAREVAM 77
W I + VG RIG G+ VY+GK+ VA+K+++ TP+++ F EV +
Sbjct: 19 WEIPDGQITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQA----FKNEVGV 73
Query: 78 LSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARA 137
L + +H N++ F+G P + IVT+ G +L +L + ++ I A AR
Sbjct: 74 LRKTRHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARG 132
Query: 138 MECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESL---TEMMTAETGTYRWMAP 194
M+ LH+ IIHRDLK N+ L ED T+K+ DFGLA E+S + +G+ WMAP
Sbjct: 133 MDYLHAKSIIHRDLKSNNIFLHED-NTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP 191
Query: 195 EL-------------------------------YSTVTLRQGEKKHYNHKNVRPS----A 219
E+ YS + R + ++ P
Sbjct: 192 EVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVR 251
Query: 220 ENVPEELSIILTSCWKEDPNARPNFTQII 248
N P+ + ++ C K+ + RP+F +I+
Sbjct: 252 SNCPKRMKRLMAECLKKKRDERPSFPRIL 280
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 129/271 (47%), Gaps = 52/271 (19%)
Query: 18 KWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAM 77
KW ++ + + ++G G + +VYEG +K ++ + + +T +E + F +E A+
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAV----KTLKEDTMEVEEFLKEAAV 62
Query: 78 LSRVQHRNLVKFIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+ ++H NLV+ +G C +EP I+TE ++ G L YL + + V + A I+
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGT-------- 188
AME L IHRDL N L+ E+ +K+ADFGL+R +MT +T T
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGEN-HLVKVADFGLSR------LMTGDTYTAHAGAKFP 175
Query: 189 YRWMAPEL-----------------------------YSTVTLRQ-GEKKHYNHKNVRPS 218
+W APE Y + L Q E +++ RP
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP- 234
Query: 219 AENVPEELSIILTSCWKEDPNARPNFTQIIQ 249
E PE++ ++ +CW+ +P+ RP+F +I Q
Sbjct: 235 -EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 129/271 (47%), Gaps = 52/271 (19%)
Query: 18 KWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAM 77
KW ++ + + ++G G + +VYEG +K ++ + + +T +E + F +E A+
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAV----KTLKEDTMEVEEFLKEAAV 62
Query: 78 LSRVQHRNLVKFIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+ ++H NLV+ +G C +EP I+TE ++ G L YL + + V + A I+
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGT-------- 188
AME L IHRDL N L+ E+ +K+ADFGL+R +MT +T T
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGEN-HLVKVADFGLSR------LMTGDTYTAHAGAKFP 175
Query: 189 YRWMAPEL-----------------------------YSTVTLRQ-GEKKHYNHKNVRPS 218
+W APE Y + L Q E +++ RP
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP- 234
Query: 219 AENVPEELSIILTSCWKEDPNARPNFTQIIQ 249
E PE++ ++ +CW+ +P+ RP+F +I Q
Sbjct: 235 -EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 128/271 (47%), Gaps = 46/271 (16%)
Query: 18 KWLIDPKHLFVGPRIGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREV 75
KW+++ + L +G +IG G +V+ G+ + N VA+K + P+ AK F +E
Sbjct: 108 KWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAK----FLQEA 163
Query: 76 AMLSRVQHRNLVKFIGAC--KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALD 133
+L + H N+V+ IG C K+P+ IV EL+ GG +L R L V + D
Sbjct: 164 RILKQYSHPNIVRLIGVCTQKQPIY-IVMELVQGGDFLTFLRTEGAR-LRVKTLLQMVGD 221
Query: 134 IARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYR--- 190
A ME L S IHRDL N L+TE +K++DFG++REE+ + + A +G R
Sbjct: 222 AAAGMEYLESKCCIHRDLAARNCLVTEK-NVLKISDFGMSREEA--DGVXAASGGLRQVP 278
Query: 191 --WMAPE-------------------LYSTVTLRQGEKKHYNHKNVR---------PSAE 220
W APE L+ T +L + +++ R P E
Sbjct: 279 VKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPE 338
Query: 221 NVPEELSIILTSCWKEDPNARPNFTQIIQML 251
P+ + ++ CW +P RP+F+ I Q L
Sbjct: 339 LCPDAVFRLMEQCWAYEPGQRPSFSTIYQEL 369
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 128/271 (47%), Gaps = 46/271 (16%)
Query: 18 KWLIDPKHLFVGPRIGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREV 75
KW+++ + L +G +IG G +V+ G+ + N VA+K + P+ AK F +E
Sbjct: 108 KWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAK----FLQEA 163
Query: 76 AMLSRVQHRNLVKFIGAC--KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALD 133
+L + H N+V+ IG C K+P+ IV EL+ GG +L R L V + D
Sbjct: 164 RILKQYSHPNIVRLIGVCTQKQPIY-IVMELVQGGDFLTFLRTEGAR-LRVKTLLQMVGD 221
Query: 134 IARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYR--- 190
A ME L S IHRDL N L+TE +K++DFG++REE+ + + A +G R
Sbjct: 222 AAAGMEYLESKCCIHRDLAARNCLVTEK-NVLKISDFGMSREEA--DGVYAASGGLRQVP 278
Query: 191 --WMAPE-------------------LYSTVTLRQGEKKHYNHKNVR---------PSAE 220
W APE L+ T +L + +++ R P E
Sbjct: 279 VKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPE 338
Query: 221 NVPEELSIILTSCWKEDPNARPNFTQIIQML 251
P+ + ++ CW +P RP+F+ I Q L
Sbjct: 339 LCPDAVFRLMEQCWAYEPGQRPSFSTIYQEL 369
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 129/286 (45%), Gaps = 46/286 (16%)
Query: 2 ESRSRFYLADELKLDAKWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVH-KGET 60
E R+R W I + VG RIG G+ VY+GK+ VA+K+++ T
Sbjct: 13 EDRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPT 71
Query: 61 PEEIAKKESRFAREVAMLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPR 120
P+++ F EV +L + +H N++ F+G +P + IVT+ G +L +L + +
Sbjct: 72 PQQLQA----FKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK 127
Query: 121 CLDVCVAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESL-- 178
++ I A A+ M+ LH+ IIHRDLK N+ L EDL T+K+ DFGLA +S
Sbjct: 128 -FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWS 185
Query: 179 -TEMMTAETGTYRWMAPEL-------------------------------YSTVTLRQG- 205
+ +G+ WMAPE+ YS + R
Sbjct: 186 GSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 245
Query: 206 ---EKKHYNHKNVRPSAENVPEELSIILTSCWKEDPNARPNFTQII 248
+ Y ++ N P+ + ++ C K+ + RP F QI+
Sbjct: 246 IFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 291
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 132/274 (48%), Gaps = 49/274 (17%)
Query: 13 LKLDAKWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFA 72
+ LD KW ++ + + ++G G +VYEG +K ++ + + +T +E + F
Sbjct: 1 MSLD-KWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAV----KTLKEDTMEVEEFL 55
Query: 73 REVAMLSRVQHRNLVKFIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFA 131
+E A++ ++H NLV+ +G C +EP I+TE ++ G L YL + + V + A
Sbjct: 56 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMA 115
Query: 132 LDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGT--- 188
I+ AME L IHRDL N L+ E+ +K+ADFGL+R +MT +T T
Sbjct: 116 TQISSAMEYLEKKNFIHRDLAARNCLVGEN-HLVKVADFGLSR------LMTGDTXTAHA 168
Query: 189 -----YRWMAPE--LYSTVTLRQG---------EKKHYN---HKNVRPSA---------- 219
+W APE Y+ +++ E Y + + PS
Sbjct: 169 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYR 228
Query: 220 ----ENVPEELSIILTSCWKEDPNARPNFTQIIQ 249
E PE++ ++ +CW+ +P+ RP+F +I Q
Sbjct: 229 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 262
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 129/286 (45%), Gaps = 46/286 (16%)
Query: 2 ESRSRFYLADELKLDAKWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVH-KGET 60
E R+R W I + VG RIG G+ VY+GK+ VA+K+++ T
Sbjct: 14 EDRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPT 72
Query: 61 PEEIAKKESRFAREVAMLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPR 120
P+++ F EV +L + +H N++ F+G +P + IVT+ G +L +L + +
Sbjct: 73 PQQLQA----FKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK 128
Query: 121 CLDVCVAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESL-- 178
++ I A A+ M+ LH+ IIHRDLK N+ L EDL T+K+ DFGLA +S
Sbjct: 129 -FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWS 186
Query: 179 -TEMMTAETGTYRWMAPEL-------------------------------YSTVTLRQG- 205
+ +G+ WMAPE+ YS + R
Sbjct: 187 GSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 246
Query: 206 ---EKKHYNHKNVRPSAENVPEELSIILTSCWKEDPNARPNFTQII 248
+ Y ++ N P+ + ++ C K+ + RP F QI+
Sbjct: 247 IFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 292
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 129/271 (47%), Gaps = 52/271 (19%)
Query: 18 KWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAM 77
KW ++ + + ++G G + +VYEG +K ++ + + +T +E + F +E A+
Sbjct: 8 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAV----KTLKEDTMEVEEFLKEAAV 63
Query: 78 LSRVQHRNLVKFIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+ ++H NLV+ +G C +EP I+ E ++ G L YL + ++ V + A I+
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 123
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGT-------- 188
AME L IHRDL N L+ E+ +K+ADFGL+R +MT +T T
Sbjct: 124 AMEYLEKKNFIHRDLAARNCLVGEN-HLVKVADFGLSR------LMTGDTXTAHAGAKFP 176
Query: 189 YRWMAPEL-----------------------------YSTVTLRQ-GEKKHYNHKNVRPS 218
+W APE Y + L Q E +++ RP
Sbjct: 177 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP- 235
Query: 219 AENVPEELSIILTSCWKEDPNARPNFTQIIQ 249
E PE++ ++ +CW+ +P+ RP+F +I Q
Sbjct: 236 -EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 265
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 129/271 (47%), Gaps = 52/271 (19%)
Query: 18 KWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAM 77
KW ++ + + ++G G + +VYEG +K ++ + + +T +E + F +E A+
Sbjct: 12 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAV----KTLKEDTMEVEEFLKEAAV 67
Query: 78 LSRVQHRNLVKFIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+ ++H NLV+ +G C +EP I+ E ++ G L YL + ++ V + A I+
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 127
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGT-------- 188
AME L IHRDL N L+ E+ +K+ADFGL+R +MT +T T
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVGEN-HLVKVADFGLSR------LMTGDTYTAHAGAKFP 180
Query: 189 YRWMAPEL-----------------------------YSTVTLRQ-GEKKHYNHKNVRPS 218
+W APE Y + L Q E +++ RP
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP- 239
Query: 219 AENVPEELSIILTSCWKEDPNARPNFTQIIQ 249
E PE++ ++ +CW+ +P+ RP+F +I Q
Sbjct: 240 -EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 269
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 109/200 (54%), Gaps = 16/200 (8%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVH-KGETPEEIAKKESRFAREVAM 77
W I + VG RIG G+ VY+GK+ VA+K+++ TP+++ F EV +
Sbjct: 8 WEIPDGQITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQA----FKNEVGV 62
Query: 78 LSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARA 137
L + +H N++ F+G +P + IVT+ G +L +L + + ++ I A A+
Sbjct: 63 LRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQG 121
Query: 138 MECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESL---TEMMTAETGTYRWMAP 194
M+ LH+ IIHRDLK N+ L EDL T+K+ DFGLA +S + +G+ WMAP
Sbjct: 122 MDYLHAKSIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 180
Query: 195 ELYSTVTLRQGEKKHYNHKN 214
E+ +R +K Y+ ++
Sbjct: 181 EV-----IRMQDKNPYSFQS 195
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 129/269 (47%), Gaps = 48/269 (17%)
Query: 18 KWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAM 77
KW ++ + + ++G G + +VYEG +K ++ + + +T +E + F +E A+
Sbjct: 5 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAV----KTLKEDTMEVEEFLKEAAV 60
Query: 78 LSRVQHRNLVKFIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+ ++H NLV+ +G C +EP I+ E ++ G L YL + + V + A I+
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 120
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGT-------- 188
AME L IHRDL N L+ E+ +K+ADFGL+R +MT +T T
Sbjct: 121 AMEYLEKKNFIHRDLAARNCLVGEN-HLVKVADFGLSR------LMTGDTXTAHAGAKFP 173
Query: 189 YRWMAPE--LYSTVTLRQG---------EKKHYN---HKNVRPSA--------------E 220
+W APE Y+ +++ E Y + + PS E
Sbjct: 174 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPE 233
Query: 221 NVPEELSIILTSCWKEDPNARPNFTQIIQ 249
PE++ ++ +CW+ +P+ RP+F +I Q
Sbjct: 234 GCPEKVYELMRACWQWNPSDRPSFAEIHQ 262
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 109/200 (54%), Gaps = 16/200 (8%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVH-KGETPEEIAKKESRFAREVAM 77
W I + VG RIG G+ VY+GK+ VA+K+++ TP+++ F EV +
Sbjct: 5 WEIPDGQITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQA----FKNEVGV 59
Query: 78 LSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARA 137
L + +H N++ F+G +P + IVT+ G +L +L + + ++ I A A+
Sbjct: 60 LRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQG 118
Query: 138 MECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESL---TEMMTAETGTYRWMAP 194
M+ LH+ IIHRDLK N+ L EDL T+K+ DFGLA +S + +G+ WMAP
Sbjct: 119 MDYLHAKSIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 177
Query: 195 ELYSTVTLRQGEKKHYNHKN 214
E+ +R +K Y+ ++
Sbjct: 178 EV-----IRMQDKNPYSFQS 192
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 101/182 (55%), Gaps = 11/182 (6%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVH-KGETPEEIAKKESRFAREVAM 77
W I + VG RIG G+ VY+GK+ VA+K+++ TP+++ F EV +
Sbjct: 8 WEIPDGQITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQA----FKNEVGV 62
Query: 78 LSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARA 137
L + +H N++ F+G +P + IVT+ G +L +L + + ++ I A A+
Sbjct: 63 LRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQG 121
Query: 138 MECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESL---TEMMTAETGTYRWMAP 194
M+ LH+ IIHRDLK N+ L EDL T+K+ DFGLA +S + +G+ WMAP
Sbjct: 122 MDYLHAKSIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 180
Query: 195 EL 196
E+
Sbjct: 181 EV 182
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 130/273 (47%), Gaps = 52/273 (19%)
Query: 18 KWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAM 77
KW ++ + + ++G G + +VYEG +K ++ + + +T +E + F +E A+
Sbjct: 253 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAV----KTLKEDTMEVEEFLKEAAV 308
Query: 78 LSRVQHRNLVKFIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+ ++H NLV+ +G C +EP I+TE ++ G L YL + ++ V + A I+
Sbjct: 309 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 368
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGT-------- 188
AME L IHR+L N L+ E+ +K+ADFGL+R +MT +T T
Sbjct: 369 AMEYLEKKNFIHRNLAARNCLVGEN-HLVKVADFGLSR------LMTGDTYTAHAGAKFP 421
Query: 189 YRWMAPEL-----------------------------YSTVTLRQ-GEKKHYNHKNVRPS 218
+W APE Y + L Q E +++ RP
Sbjct: 422 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP- 480
Query: 219 AENVPEELSIILTSCWKEDPNARPNFTQIIQML 251
E PE++ ++ +CW+ +P+ RP+F +I Q
Sbjct: 481 -EGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 512
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 109/200 (54%), Gaps = 16/200 (8%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVH-KGETPEEIAKKESRFAREVAM 77
W I + VG RIG G+ VY+GK+ VA+K+++ TP+++ F EV +
Sbjct: 3 WEIPDGQITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQA----FKNEVGV 57
Query: 78 LSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARA 137
L + +H N++ F+G +P + IVT+ G +L +L + + ++ I A A+
Sbjct: 58 LRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQG 116
Query: 138 MECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESL---TEMMTAETGTYRWMAP 194
M+ LH+ IIHRDLK N+ L EDL T+K+ DFGLA +S + +G+ WMAP
Sbjct: 117 MDYLHAKSIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 175
Query: 195 ELYSTVTLRQGEKKHYNHKN 214
E+ +R +K Y+ ++
Sbjct: 176 EV-----IRMQDKNPYSFQS 190
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 124/269 (46%), Gaps = 46/269 (17%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVH-KGETPEEIAKKESRFAREVAM 77
W I + VG RIG G+ VY+GK+ VA+K+++ TP+++ F EV +
Sbjct: 7 WEIPDGQITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQA----FKNEVGV 61
Query: 78 LSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARA 137
L + +H N++ F+G +P + IVT+ G +L +L + ++ I A AR
Sbjct: 62 LRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARG 120
Query: 138 MECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESL---TEMMTAETGTYRWMAP 194
M+ LH+ IIHRDLK N+ L ED T+K+ DFGLA +S + +G+ WMAP
Sbjct: 121 MDYLHAKSIIHRDLKSNNIFLHED-NTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 179
Query: 195 EL-------------------------------YSTVTLRQGEKKHYNHKNVRPS----A 219
E+ YS + R + ++ P
Sbjct: 180 EVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVR 239
Query: 220 ENVPEELSIILTSCWKEDPNARPNFTQII 248
N P+ + ++ C K+ + RP+F +I+
Sbjct: 240 SNCPKRMKRLMAECLKKKRDERPSFPRIL 268
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 130/273 (47%), Gaps = 52/273 (19%)
Query: 18 KWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAM 77
KW ++ + + ++G G + +VYEG +K ++ + + +T +E + F +E A+
Sbjct: 211 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAV----KTLKEDTMEVEEFLKEAAV 266
Query: 78 LSRVQHRNLVKFIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+ ++H NLV+ +G C +EP I+TE ++ G L YL + ++ V + A I+
Sbjct: 267 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 326
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGT-------- 188
AME L IHR+L N L+ E+ +K+ADFGL+R +MT +T T
Sbjct: 327 AMEYLEKKNFIHRNLAARNCLVGEN-HLVKVADFGLSR------LMTGDTYTAHAGAKFP 379
Query: 189 YRWMAPEL-----------------------------YSTVTLRQ-GEKKHYNHKNVRPS 218
+W APE Y + L Q E +++ RP
Sbjct: 380 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP- 438
Query: 219 AENVPEELSIILTSCWKEDPNARPNFTQIIQML 251
E PE++ ++ +CW+ +P+ RP+F +I Q
Sbjct: 439 -EGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 470
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 129/273 (47%), Gaps = 52/273 (19%)
Query: 18 KWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAM 77
KW ++ + + ++G G + +VYEG +K ++ + + +T +E + F +E A+
Sbjct: 214 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAV----KTLKEDTMEVEEFLKEAAV 269
Query: 78 LSRVQHRNLVKFIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+ ++H NLV+ +G C +EP I+TE ++ G L YL + + V + A I+
Sbjct: 270 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 329
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGT-------- 188
AME L IHR+L N L+ E+ +K+ADFGL+R +MT +T T
Sbjct: 330 AMEYLEKKNFIHRNLAARNCLVGEN-HLVKVADFGLSR------LMTGDTYTAHAGAKFP 382
Query: 189 YRWMAPEL-----------------------------YSTVTLRQ-GEKKHYNHKNVRPS 218
+W APE Y + L Q E +++ RP
Sbjct: 383 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP- 441
Query: 219 AENVPEELSIILTSCWKEDPNARPNFTQIIQML 251
E PE++ ++ +CW+ +P+ RP+F +I Q
Sbjct: 442 -EGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 473
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 128/271 (47%), Gaps = 52/271 (19%)
Query: 18 KWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAM 77
KW ++ + + ++G G + +VYEG +K ++ + + +T +E + F +E A+
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAV----KTLKEDTMEVEEFLKEAAV 62
Query: 78 LSRVQHRNLVKFIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+ ++H NLV+ +G C +EP I+ E ++ G L YL + + V + A I+
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGT-------- 188
AME L IHRDL N L+ E+ +K+ADFGL+R +MT +T T
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGEN-HLVKVADFGLSR------LMTGDTYTAHAGAKFP 175
Query: 189 YRWMAPEL-----------------------------YSTVTLRQ-GEKKHYNHKNVRPS 218
+W APE Y + L Q E +++ RP
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP- 234
Query: 219 AENVPEELSIILTSCWKEDPNARPNFTQIIQ 249
E PE++ ++ +CW+ +P+ RP+F +I Q
Sbjct: 235 -EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 128/271 (47%), Gaps = 52/271 (19%)
Query: 18 KWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAM 77
KW ++ + + ++G G + +VYEG +K ++ + + +T +E + F +E A+
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAV----KTLKEDTMEVEEFLKEAAV 62
Query: 78 LSRVQHRNLVKFIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+ ++H NLV+ +G C +EP I+ E ++ G L YL + + V + A I+
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGT-------- 188
AME L IHRDL N L+ E+ +K+ADFGL+R +MT +T T
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGEN-HLVKVADFGLSR------LMTGDTYTAHAGAKFP 175
Query: 189 YRWMAPEL-----------------------------YSTVTLRQ-GEKKHYNHKNVRPS 218
+W APE Y + L Q E +++ RP
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP- 234
Query: 219 AENVPEELSIILTSCWKEDPNARPNFTQIIQ 249
E PE++ ++ +CW+ +P+ RP+F +I Q
Sbjct: 235 -EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 108/200 (54%), Gaps = 16/200 (8%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVH-KGETPEEIAKKESRFAREVAM 77
W I + VG RIG G+ VY+GK+ VA+K+++ TP+++ F EV +
Sbjct: 3 WEIPDGQITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQA----FKNEVGV 57
Query: 78 LSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARA 137
L + +H N++ F+G P + IVT+ G +L +L + + ++ I A A+
Sbjct: 58 LRKTRHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQG 116
Query: 138 MECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESL---TEMMTAETGTYRWMAP 194
M+ LH+ IIHRDLK N+ L EDL T+K+ DFGLA +S + +G+ WMAP
Sbjct: 117 MDYLHAKSIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 175
Query: 195 ELYSTVTLRQGEKKHYNHKN 214
E+ +R +K Y+ ++
Sbjct: 176 EV-----IRMQDKNPYSFQS 190
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 102/182 (56%), Gaps = 11/182 (6%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGE-TPEEIAKKESRFAREVAM 77
W I+ + + RIG G+ VY+GK+ VA+KI+ + TPE+ F EVA+
Sbjct: 31 WEIEASEVMLSTRIGSGSFGTVYKGKWHGD-VAVKILKVVDPTPEQFQA----FRNEVAV 85
Query: 78 LSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARA 137
L + +H N++ F+G + + IVT+ G +L K+ L+++ + I A A+
Sbjct: 86 LRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKH-LHVQETKFQMFQLIDIARQTAQG 144
Query: 138 MECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESL---TEMMTAETGTYRWMAP 194
M+ LH+ IIHRD+K N+ L E L T+K+ DFGLA +S ++ + TG+ WMAP
Sbjct: 145 MDYLHAKNIIHRDMKSNNIFLHEGL-TVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAP 203
Query: 195 EL 196
E+
Sbjct: 204 EV 205
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 132/299 (44%), Gaps = 67/299 (22%)
Query: 12 ELKLDAKWLIDPKHLFVGPRIGEGAHAKVY---------EGKYKNQTVAIKIVHKGETPE 62
EL D +W + L +G +GEGA +V + + VA+K++ T +
Sbjct: 16 ELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK 75
Query: 63 EIAKKESRFAREVAMLSRV-QHRNLVKFIGACKE--PVMVIVTELLSGGTLRKYLLNMRP 119
++ S E+ M+ + +H+N++ +GAC + P+ VIV E S G LR+YL RP
Sbjct: 76 DL----SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLQARRP 130
Query: 120 RCLDVCVA--------------IGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTI 165
L+ C + A +AR ME L S IHRDL N+L+TED +
Sbjct: 131 PGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED-NVM 189
Query: 166 KLADFGLAREESLTEMMTAETGT---YRWMAPE-LYSTVTLRQGEKKHY----------- 210
K+ADFGLAR+ + T +WMAPE L+ + Q + +
Sbjct: 190 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 249
Query: 211 ------------------NHKNVRPSAENVPEELSIILTSCWKEDPNARPNFTQIIQML 251
H+ +PS N EL +++ CW P+ RP F Q+++ L
Sbjct: 250 GSPYPGVPVEELFKLLKEGHRMDKPS--NCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 132/299 (44%), Gaps = 67/299 (22%)
Query: 12 ELKLDAKWLIDPKHLFVGPRIGEGAHAKVY---------EGKYKNQTVAIKIVHKGETPE 62
EL D +W + L +G +GEGA +V + + VA+K++ T +
Sbjct: 1 ELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK 60
Query: 63 EIAKKESRFAREVAMLSRV-QHRNLVKFIGACKE--PVMVIVTELLSGGTLRKYLLNMRP 119
++ S E+ M+ + +H+N++ +GAC + P+ VIV E S G LR+YL RP
Sbjct: 61 DL----SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLQARRP 115
Query: 120 RCLDVCVA--------------IGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTI 165
L+ C + A +AR ME L S IHRDL N+L+TED +
Sbjct: 116 PGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED-NVM 174
Query: 166 KLADFGLAREESLTEMMTAETGT---YRWMAPE-LYSTVTLRQGEKKHY----------- 210
K+ADFGLAR+ + T +WMAPE L+ + Q + +
Sbjct: 175 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 234
Query: 211 ------------------NHKNVRPSAENVPEELSIILTSCWKEDPNARPNFTQIIQML 251
H+ +PS N EL +++ CW P+ RP F Q+++ L
Sbjct: 235 GSPYPGVPVEELFKLLKEGHRMDKPS--NCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 291
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 119/273 (43%), Gaps = 52/273 (19%)
Query: 17 AKWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-VAIKIVHKGETPEEIAKKESRFAREV 75
KW+IDP L IG G V+ G + N+ VAIK + +G EE F E
Sbjct: 1 GKWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE------DFIEEA 54
Query: 76 AMLSRVQHRNLVKFIGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDI 134
++ ++ H LV+ G C E + +VTE + G L YL R +G LD+
Sbjct: 55 EVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRG-LFAAETLLGMCLDV 113
Query: 135 ARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGT---YRW 191
M L +IHRDL N L+ E+ + IK++DFG+ R L + T+ TGT +W
Sbjct: 114 CEGMAYLEEACVIHRDLAARNCLVGEN-QVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKW 171
Query: 192 MAPELYSTV-----------------TLRQGEKKHYNHKNVRPSAENVPEELSI------ 228
+PE++S +G+ + N N V E++S
Sbjct: 172 ASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-----SEVVEDISTGFRLYK 226
Query: 229 ----------ILTSCWKEDPNARPNFTQIIQML 251
I+ CW+E P RP F+++++ L
Sbjct: 227 PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQL 259
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 131/299 (43%), Gaps = 67/299 (22%)
Query: 12 ELKLDAKWLIDPKHLFVGPRIGEGAHAKVY---------EGKYKNQTVAIKIVHKGETPE 62
EL D +W + L +G +GEGA +V + + VA+K++ T +
Sbjct: 16 ELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK 75
Query: 63 EIAKKESRFAREVAMLSRV-QHRNLVKFIGACKE--PVMVIVTELLSGGTLRKYLLNMRP 119
++ S E+ M+ + +H+N++ +GAC + P+ VIV E S G LR+YL RP
Sbjct: 76 DL----SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLQARRP 130
Query: 120 RCLDVCVA--------------IGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTI 165
L+ + A +AR ME L S IHRDL N+L+TED +
Sbjct: 131 PGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED-NVM 189
Query: 166 KLADFGLAREESLTEMMTAETGT---YRWMAPE-LYSTVTLRQGEKKHY----------- 210
K+ADFGLAR+ + T +WMAPE L+ + Q + +
Sbjct: 190 KIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 249
Query: 211 ------------------NHKNVRPSAENVPEELSIILTSCWKEDPNARPNFTQIIQML 251
H+ +PS N EL +++ CW P+ RP F Q+++ L
Sbjct: 250 GSPYPGVPVEELFKLLKEGHRMDKPS--NCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 135/304 (44%), Gaps = 67/304 (22%)
Query: 12 ELKLDAKWLIDPKHLFVGPRIGEGAHAKVYE----GKYKNQ-----TVAIKIVHKGETPE 62
EL D KW L +G +GEGA +V G K++ TVA+K++ T E
Sbjct: 23 ELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEE 82
Query: 63 EIAKKESRFAREVAMLSRV-QHRNLVKFIGACKE--PVMVIVTELLSGGTLRKYLLNMRP 119
++ S E+ M+ + +H+N++ +GAC + P+ VIV E S G LR+YL RP
Sbjct: 83 DL----SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLRARRP 137
Query: 120 RCLDVCVAI--------------GFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTI 165
++ I +AR ME L S IHRDL N+L+TE+ +
Sbjct: 138 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN-NVM 196
Query: 166 KLADFGLAREESLTEMMTAETGT---YRWMAPE-LYSTVTLRQGEKKHY----------- 210
K+ADFGLAR+ + + T +WMAPE L+ V Q + +
Sbjct: 197 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 211 ------------------NHKNVRPSAENVPEELSIILTSCWKEDPNARPNFTQIIQMLL 252
H+ +P+ N EL +++ CW P+ RP F Q+++ L
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRMDKPA--NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
Query: 253 NYLS 256
L+
Sbjct: 315 RILT 318
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 123/277 (44%), Gaps = 52/277 (18%)
Query: 17 AKWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQ-TVAIKIVHKGETPEEIAKKESRFAREV 75
W IDPK L +G G V GK++ Q VAIK++ +G E+ F E
Sbjct: 1 GSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED------EFIEEA 54
Query: 76 AMLSRVQHRNLVKFIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPR-----CLDVCVAIG 129
++ + H LV+ G C K+ + I+TE ++ G L YL MR R L++C
Sbjct: 55 KVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK--- 111
Query: 130 FALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGT- 188
D+ AME L S +HRDL N L+ D +K++DFGL+R L + T+ G+
Sbjct: 112 ---DVCEAMEYLESKQFLHRDLAARNCLVN-DQGVVKVSDFGLSR-YVLDDEYTSSVGSK 166
Query: 189 --YRWMAPE--LYSTVTLRQG--------------EKKHYNHKNVRPSAENVPEELSI-- 228
RW PE +YS + + K Y +AE++ + L +
Sbjct: 167 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR 226
Query: 229 ----------ILTSCWKEDPNARPNFTQIIQMLLNYL 255
I+ SCW E + RP F ++ +L+ +
Sbjct: 227 PHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVM 263
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 123/277 (44%), Gaps = 52/277 (18%)
Query: 17 AKWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQ-TVAIKIVHKGETPEEIAKKESRFAREV 75
W IDPK L +G G V GK++ Q VAIK++ +G E+ F E
Sbjct: 17 GSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED------EFIEEA 70
Query: 76 AMLSRVQHRNLVKFIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPR-----CLDVCVAIG 129
++ + H LV+ G C K+ + I+TE ++ G L YL MR R L++C
Sbjct: 71 KVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK--- 127
Query: 130 FALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGT- 188
D+ AME L S +HRDL N L+ D +K++DFGL+R L + T+ G+
Sbjct: 128 ---DVCEAMEYLESKQFLHRDLAARNCLVN-DQGVVKVSDFGLSR-YVLDDEYTSSVGSK 182
Query: 189 --YRWMAPE--LYSTVTLRQG--------------EKKHYNHKNVRPSAENVPEELSI-- 228
RW PE +YS + + K Y +AE++ + L +
Sbjct: 183 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR 242
Query: 229 ----------ILTSCWKEDPNARPNFTQIIQMLLNYL 255
I+ SCW E + RP F ++ +L+ +
Sbjct: 243 PHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVM 279
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 118/273 (43%), Gaps = 52/273 (19%)
Query: 17 AKWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-VAIKIVHKGETPEEIAKKESRFAREV 75
KW+IDP L IG G V+ G + N+ VAIK + +G EE F E
Sbjct: 3 GKWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE------DFIEEA 56
Query: 76 AMLSRVQHRNLVKFIGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDI 134
++ ++ H LV+ G C E + +V E + G L YL R +G LD+
Sbjct: 57 EVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG-LFAAETLLGMCLDV 115
Query: 135 ARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGT---YRW 191
M L +IHRDL N L+ E+ + IK++DFG+ R L + T+ TGT +W
Sbjct: 116 CEGMAYLEEACVIHRDLAARNCLVGEN-QVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKW 173
Query: 192 MAPELYSTV-----------------TLRQGEKKHYNHKNVRPSAENVPEELSI------ 228
+PE++S +G+ + N N V E++S
Sbjct: 174 ASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-----SEVVEDISTGFRLYK 228
Query: 229 ----------ILTSCWKEDPNARPNFTQIIQML 251
I+ CW+E P RP F+++++ L
Sbjct: 229 PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQL 261
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 123/277 (44%), Gaps = 52/277 (18%)
Query: 17 AKWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQ-TVAIKIVHKGETPEEIAKKESRFAREV 75
W IDPK L +G G V GK++ Q VAIK++ +G E+ F E
Sbjct: 8 GSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED------EFIEEA 61
Query: 76 AMLSRVQHRNLVKFIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPR-----CLDVCVAIG 129
++ + H LV+ G C K+ + I+TE ++ G L YL MR R L++C
Sbjct: 62 KVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK--- 118
Query: 130 FALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGT- 188
D+ AME L S +HRDL N L+ D +K++DFGL+R L + T+ G+
Sbjct: 119 ---DVCEAMEYLESKQFLHRDLAARNCLVN-DQGVVKVSDFGLSR-YVLDDEYTSSVGSK 173
Query: 189 --YRWMAPE--LYSTVTLRQG--------------EKKHYNHKNVRPSAENVPEELSI-- 228
RW PE +YS + + K Y +AE++ + L +
Sbjct: 174 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR 233
Query: 229 ----------ILTSCWKEDPNARPNFTQIIQMLLNYL 255
I+ SCW E + RP F ++ +L+ +
Sbjct: 234 PHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVM 270
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 122/275 (44%), Gaps = 52/275 (18%)
Query: 17 AKWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQ-TVAIKIVHKGETPEEIAKKESRFAREV 75
W IDPK L +G G V GK++ Q VAIK++ +G E+ F E
Sbjct: 2 GSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED------EFIEEA 55
Query: 76 AMLSRVQHRNLVKFIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPR-----CLDVCVAIG 129
++ + H LV+ G C K+ + I+TE ++ G L YL MR R L++C
Sbjct: 56 KVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK--- 112
Query: 130 FALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGT- 188
D+ AME L S +HRDL N L+ D +K++DFGL+R L + T+ G+
Sbjct: 113 ---DVCEAMEYLESKQFLHRDLAARNCLVN-DQGVVKVSDFGLSR-YVLDDEYTSSVGSK 167
Query: 189 --YRWMAPE--LYSTVTLRQG--------------EKKHYNHKNVRPSAENVPEELSI-- 228
RW PE +YS + + K Y +AE++ + L +
Sbjct: 168 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR 227
Query: 229 ----------ILTSCWKEDPNARPNFTQIIQMLLN 253
I+ SCW E + RP F ++ +L+
Sbjct: 228 PHLASEKVYTIMYSCWHEKADERPTFKILLSNILD 262
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 131/299 (43%), Gaps = 67/299 (22%)
Query: 12 ELKLDAKWLIDPKHLFVGPRIGEGAHAKVY---------EGKYKNQTVAIKIVHKGETPE 62
EL D +W + L +G +GEGA +V + + VA+K++ T +
Sbjct: 8 ELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK 67
Query: 63 EIAKKESRFAREVAMLSRV-QHRNLVKFIGACKE--PVMVIVTELLSGGTLRKYLLNMRP 119
++ S E+ M+ + +H+N++ +GAC + P+ VIV E S G LR+YL RP
Sbjct: 68 DL----SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLQARRP 122
Query: 120 RCLDVCVA--------------IGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTI 165
L+ + A +AR ME L S IHRDL N+L+TED +
Sbjct: 123 PGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED-NVM 181
Query: 166 KLADFGLAREESLTEMMTAETGT---YRWMAPE-LYSTVTLRQGEKKHY----------- 210
K+ADFGLAR+ + T +WMAPE L+ + Q + +
Sbjct: 182 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 241
Query: 211 ------------------NHKNVRPSAENVPEELSIILTSCWKEDPNARPNFTQIIQML 251
H+ +PS N EL +++ CW P+ RP F Q+++ L
Sbjct: 242 GSPYPGVPVEELFKLLKEGHRMDKPS--NCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 298
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 131/299 (43%), Gaps = 67/299 (22%)
Query: 12 ELKLDAKWLIDPKHLFVGPRIGEGAHAKVY---------EGKYKNQTVAIKIVHKGETPE 62
EL D +W + L +G +GEGA +V + + VA+K++ T +
Sbjct: 5 ELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK 64
Query: 63 EIAKKESRFAREVAMLSRV-QHRNLVKFIGACKE--PVMVIVTELLSGGTLRKYLLNMRP 119
++ S E+ M+ + +H+N++ +GAC + P+ VIV E S G LR+YL RP
Sbjct: 65 DL----SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLQARRP 119
Query: 120 RCLDVCVA--------------IGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTI 165
L+ + A +AR ME L S IHRDL N+L+TED +
Sbjct: 120 PGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED-NVM 178
Query: 166 KLADFGLAREESLTEMMTAETGT---YRWMAPE-LYSTVTLRQGEKKHY----------- 210
K+ADFGLAR+ + T +WMAPE L+ + Q + +
Sbjct: 179 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 238
Query: 211 ------------------NHKNVRPSAENVPEELSIILTSCWKEDPNARPNFTQIIQML 251
H+ +PS N EL +++ CW P+ RP F Q+++ L
Sbjct: 239 GSPYPGVPVEELFKLLKEGHRMDKPS--NCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 295
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 131/299 (43%), Gaps = 67/299 (22%)
Query: 12 ELKLDAKWLIDPKHLFVGPRIGEGAHAKVY---------EGKYKNQTVAIKIVHKGETPE 62
EL D +W + L +G +GEGA +V + + VA+K++ T +
Sbjct: 57 ELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK 116
Query: 63 EIAKKESRFAREVAMLSRV-QHRNLVKFIGACKE--PVMVIVTELLSGGTLRKYLLNMRP 119
++ S E+ M+ + +H+N++ +GAC + P+ VIV E S G LR+YL RP
Sbjct: 117 DL----SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLQARRP 171
Query: 120 RCLDVCVA--------------IGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTI 165
L+ + A +AR ME L S IHRDL N+L+TED +
Sbjct: 172 PGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED-NVM 230
Query: 166 KLADFGLAREESLTEMMTAETGT---YRWMAPE-LYSTVTLRQGEKKHY----------- 210
K+ADFGLAR+ + T +WMAPE L+ + Q + +
Sbjct: 231 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 290
Query: 211 ------------------NHKNVRPSAENVPEELSIILTSCWKEDPNARPNFTQIIQML 251
H+ +PS N EL +++ CW P+ RP F Q+++ L
Sbjct: 291 GSPYPGVPVEELFKLLKEGHRMDKPS--NCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 347
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 121/273 (44%), Gaps = 42/273 (15%)
Query: 18 KWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-VAIKIVHKGETPEEIAKKESRFAREVA 76
+W + + L + R+G G +V+ G Y T VA+K + +G + F E
Sbjct: 16 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG------SMSPDAFLAEAN 69
Query: 77 MLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
++ ++QH+ LV+ + + I+TE + G+L +L L + + A IA
Sbjct: 70 LMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 129
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY--RWMAP 194
M + IHRDL+ N+L+++ L + K+ADFGLAR E E + +W AP
Sbjct: 130 GMAFIEERNYIHRDLRAANILVSDTL-SCKIADFGLARLIEDNEXTAREGAKFPIKWTAP 188
Query: 195 EL--YSTVTLRQG----------------------------EKKHYNHKNVRPSAENVPE 224
E Y T T++ + ++ VRP +N PE
Sbjct: 189 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP--DNCPE 246
Query: 225 ELSIILTSCWKEDPNARPNFTQIIQMLLNYLSA 257
EL ++ CWKE P RP F + +L ++ +A
Sbjct: 247 ELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 279
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 131/299 (43%), Gaps = 67/299 (22%)
Query: 12 ELKLDAKWLIDPKHLFVGPRIGEGAHAKVY---------EGKYKNQTVAIKIVHKGETPE 62
EL D +W + L +G +GEGA +V + + VA+K++ T +
Sbjct: 9 ELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK 68
Query: 63 EIAKKESRFAREVAMLSRV-QHRNLVKFIGACKE--PVMVIVTELLSGGTLRKYLLNMRP 119
++ S E+ M+ + +H+N++ +GAC + P+ VIV E S G LR+YL RP
Sbjct: 69 DL----SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLQARRP 123
Query: 120 RCLDVCVA--------------IGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTI 165
L+ + A +AR ME L S IHRDL N+L+TED +
Sbjct: 124 PGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED-NVM 182
Query: 166 KLADFGLAREESLTEMMTAETGT---YRWMAPE-LYSTVTLRQGEKKHY----------- 210
K+ADFGLAR+ + T +WMAPE L+ + Q + +
Sbjct: 183 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 242
Query: 211 ------------------NHKNVRPSAENVPEELSIILTSCWKEDPNARPNFTQIIQML 251
H+ +PS N EL +++ CW P+ RP F Q+++ L
Sbjct: 243 GSPYPGVPVEELFKLLKEGHRMDKPS--NCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 299
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 122/269 (45%), Gaps = 44/269 (16%)
Query: 15 LDAKWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFARE 74
L + W ++ K L + IG+G V G Y+ VA+K + T + F E
Sbjct: 3 LGSGWALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQA-------FLAE 55
Query: 75 VAMLSRVQHRNLVKFIGACKEPV--MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFAL 132
+++++++H NLV+ +G E + IVTE ++ G+L YL + L + F+L
Sbjct: 56 ASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL 115
Query: 133 DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGT--YR 190
D+ AME L + +HRDL N+L++ED K++DFGL +E S T+ +TG +
Sbjct: 116 DVCEAMEYLEGNNFVHRDLAARNVLVSED-NVAKVSDFGLTKEASSTQ----DTGKLPVK 170
Query: 191 WMAPE-------------------LYSTVTLRQGEKKHYNHKNVRPSAE---------NV 222
W APE L+ + + K+V P E
Sbjct: 171 WTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGC 230
Query: 223 PEELSIILTSCWKEDPNARPNFTQIIQML 251
P + ++ +CW D RP+F Q+ + L
Sbjct: 231 PPAVYEVMKNCWHLDAAMRPSFLQLREQL 259
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 131/299 (43%), Gaps = 67/299 (22%)
Query: 12 ELKLDAKWLIDPKHLFVGPRIGEGAHAKVY---------EGKYKNQTVAIKIVHKGETPE 62
EL D +W + L +G +GEGA +V + + VA+K++ T +
Sbjct: 16 ELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK 75
Query: 63 EIAKKESRFAREVAMLSRV-QHRNLVKFIGACKE--PVMVIVTELLSGGTLRKYLLNMRP 119
++ S E+ M+ + +H+N++ +GAC + P+ VIV E S G LR+YL RP
Sbjct: 76 DL----SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLQARRP 130
Query: 120 RCLDVCVA--------------IGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTI 165
L+ + A +AR ME L S IHRDL N+L+TED +
Sbjct: 131 PGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED-NVM 189
Query: 166 KLADFGLAREESLTEMMTAETGT---YRWMAPE-LYSTVTLRQGEKKHY----------- 210
K+ADFGLAR+ + T +WMAPE L+ + Q + +
Sbjct: 190 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 249
Query: 211 ------------------NHKNVRPSAENVPEELSIILTSCWKEDPNARPNFTQIIQML 251
H+ +PS N EL +++ CW P+ RP F Q+++ L
Sbjct: 250 GSPYPGVPVEELFKLLKEGHRMDKPS--NCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 121/273 (44%), Gaps = 42/273 (15%)
Query: 18 KWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-VAIKIVHKGETPEEIAKKESRFAREVA 76
+W + + L + R+G G +V+ G Y T VA+K + +G + F E
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG------SMSPDAFLAEAN 60
Query: 77 MLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
++ ++QH+ LV+ + + I+TE + G+L +L L + + A IA
Sbjct: 61 LMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY--RWMAP 194
M + IHRDL+ N+L+++ L + K+ADFGLAR E E + +W AP
Sbjct: 121 GMAFIEERNYIHRDLRAANILVSDTL-SCKIADFGLARLIEDNEXTAREGAKFPIKWTAP 179
Query: 195 EL--YSTVTLRQG----------------------------EKKHYNHKNVRPSAENVPE 224
E Y T T++ + ++ VRP +N PE
Sbjct: 180 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP--DNCPE 237
Query: 225 ELSIILTSCWKEDPNARPNFTQIIQMLLNYLSA 257
EL ++ CWKE P RP F + +L ++ +A
Sbjct: 238 ELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 121/273 (44%), Gaps = 42/273 (15%)
Query: 18 KWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-VAIKIVHKGETPEEIAKKESRFAREVA 76
+W + + L + R+G G +V+ G Y T VA+K + +G + F E
Sbjct: 15 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG------SMSPDAFLAEAN 68
Query: 77 MLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
++ ++QH+ LV+ + + I+TE + G+L +L L + + A IA
Sbjct: 69 LMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 128
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY--RWMAP 194
M + IHRDL+ N+L+++ L + K+ADFGLAR E E + +W AP
Sbjct: 129 GMAFIEERNYIHRDLRAANILVSDTL-SCKIADFGLARLIEDNEXTAREGAKFPIKWTAP 187
Query: 195 EL--YSTVTLRQG----------------------------EKKHYNHKNVRPSAENVPE 224
E Y T T++ + ++ VRP +N PE
Sbjct: 188 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP--DNCPE 245
Query: 225 ELSIILTSCWKEDPNARPNFTQIIQMLLNYLSA 257
EL ++ CWKE P RP F + +L ++ +A
Sbjct: 246 ELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 278
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 121/273 (44%), Gaps = 42/273 (15%)
Query: 18 KWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-VAIKIVHKGETPEEIAKKESRFAREVA 76
+W + + L + R+G G +V+ G Y T VA+K + +G + F E
Sbjct: 17 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG------SMSPDAFLAEAN 70
Query: 77 MLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
++ ++QH+ LV+ + + I+TE + G+L +L L + + A IA
Sbjct: 71 LMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 130
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY--RWMAP 194
M + IHRDL+ N+L+++ L + K+ADFGLAR E E + +W AP
Sbjct: 131 GMAFIEERNYIHRDLRAANILVSDTL-SCKIADFGLARLIEDNEYTAREGAKFPIKWTAP 189
Query: 195 EL--YSTVTLRQG----------------------------EKKHYNHKNVRPSAENVPE 224
E Y T T++ + ++ VRP +N PE
Sbjct: 190 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP--DNCPE 247
Query: 225 ELSIILTSCWKEDPNARPNFTQIIQMLLNYLSA 257
EL ++ CWKE P RP F + +L ++ +A
Sbjct: 248 ELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 280
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 121/273 (44%), Gaps = 42/273 (15%)
Query: 18 KWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-VAIKIVHKGETPEEIAKKESRFAREVA 76
+W + + L + R+G G +V+ G Y T VA+K + +G + F E
Sbjct: 12 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG------SMSPDAFLAEAN 65
Query: 77 MLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
++ ++QH+ LV+ + + I+TE + G+L +L L + + A IA
Sbjct: 66 LMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 125
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY--RWMAP 194
M + IHRDL+ N+L+++ L + K+ADFGLAR E E + +W AP
Sbjct: 126 GMAFIEERNYIHRDLRAANILVSDTL-SCKIADFGLARLIEDNEYTAREGAKFPIKWTAP 184
Query: 195 EL--YSTVTLRQG----------------------------EKKHYNHKNVRPSAENVPE 224
E Y T T++ + ++ VRP +N PE
Sbjct: 185 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP--DNCPE 242
Query: 225 ELSIILTSCWKEDPNARPNFTQIIQMLLNYLSA 257
EL ++ CWKE P RP F + +L ++ +A
Sbjct: 243 ELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 275
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 121/273 (44%), Gaps = 42/273 (15%)
Query: 18 KWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-VAIKIVHKGETPEEIAKKESRFAREVA 76
+W + + L + R+G G +V+ G Y T VA+K + +G + F E
Sbjct: 9 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG------SMSPDAFLAEAN 62
Query: 77 MLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
++ ++QH+ LV+ + + I+TE + G+L +L L + + A IA
Sbjct: 63 LMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 122
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY--RWMAP 194
M + IHRDL+ N+L+++ L + K+ADFGLAR E E + +W AP
Sbjct: 123 GMAFIEERNYIHRDLRAANILVSDTL-SCKIADFGLARLIEDNEXTAREGAKFPIKWTAP 181
Query: 195 EL--YSTVTLRQG----------------------------EKKHYNHKNVRPSAENVPE 224
E Y T T++ + ++ VRP +N PE
Sbjct: 182 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP--DNCPE 239
Query: 225 ELSIILTSCWKEDPNARPNFTQIIQMLLNYLSA 257
EL ++ CWKE P RP F + +L ++ +A
Sbjct: 240 ELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 272
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 121/273 (44%), Gaps = 42/273 (15%)
Query: 18 KWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-VAIKIVHKGETPEEIAKKESRFAREVA 76
+W + + L + R+G G +V+ G Y T VA+K + +G + F E
Sbjct: 8 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG------SMSPDAFLAEAN 61
Query: 77 MLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
++ ++QH+ LV+ + + I+TE + G+L +L L + + A IA
Sbjct: 62 LMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 121
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY--RWMAP 194
M + IHRDL+ N+L+++ L + K+ADFGLAR E E + +W AP
Sbjct: 122 GMAFIEERNYIHRDLRAANILVSDTL-SCKIADFGLARLIEDNEXTAREGAKFPIKWTAP 180
Query: 195 EL--YSTVTLRQG----------------------------EKKHYNHKNVRPSAENVPE 224
E Y T T++ + ++ VRP +N PE
Sbjct: 181 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP--DNCPE 238
Query: 225 ELSIILTSCWKEDPNARPNFTQIIQMLLNYLSA 257
EL ++ CWKE P RP F + +L ++ +A
Sbjct: 239 ELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 271
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 121/273 (44%), Gaps = 42/273 (15%)
Query: 18 KWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-VAIKIVHKGETPEEIAKKESRFAREVA 76
+W + + L + R+G G +V+ G Y T VA+K + +G + F E
Sbjct: 13 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG------SMSPDAFLAEAN 66
Query: 77 MLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
++ ++QH+ LV+ + + I+TE + G+L +L L + + A IA
Sbjct: 67 LMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 126
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY--RWMAP 194
M + IHRDL+ N+L+++ L + K+ADFGLAR E E + +W AP
Sbjct: 127 GMAFIEERNYIHRDLRAANILVSDTL-SCKIADFGLARLIEDNEYTAREGAKFPIKWTAP 185
Query: 195 EL--YSTVTLRQG----------------------------EKKHYNHKNVRPSAENVPE 224
E Y T T++ + ++ VRP +N PE
Sbjct: 186 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP--DNCPE 243
Query: 225 ELSIILTSCWKEDPNARPNFTQIIQMLLNYLSA 257
EL ++ CWKE P RP F + +L ++ +A
Sbjct: 244 ELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 276
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 123/277 (44%), Gaps = 52/277 (18%)
Query: 17 AKWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQ-TVAIKIVHKGETPEEIAKKESRFAREV 75
W IDPK L +G G V GK++ Q VAIK++ +G E+ F E
Sbjct: 17 GSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED------EFIEEA 70
Query: 76 AMLSRVQHRNLVKFIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPR-----CLDVCVAIG 129
++ + H LV+ G C K+ + I+TE ++ G L YL MR R L++C
Sbjct: 71 KVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK--- 127
Query: 130 FALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGT- 188
D+ AME L S +HRDL N L+ D +K++DFGL+R L + T+ G+
Sbjct: 128 ---DVCEAMEYLESKQFLHRDLAARNCLVN-DQGVVKVSDFGLSR-YVLDDEETSSVGSK 182
Query: 189 --YRWMAPE--LYSTVTLRQG--------------EKKHYNHKNVRPSAENVPEELSI-- 228
RW PE +YS + + K Y +AE++ + L +
Sbjct: 183 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR 242
Query: 229 ----------ILTSCWKEDPNARPNFTQIIQMLLNYL 255
I+ SCW E + RP F ++ +L+ +
Sbjct: 243 PHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVM 279
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 121/273 (44%), Gaps = 42/273 (15%)
Query: 18 KWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-VAIKIVHKGETPEEIAKKESRFAREVA 76
+W + + L + R+G G +V+ G Y T VA+K + +G + F E
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG------SMSPDAFLAEAN 60
Query: 77 MLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
++ ++QH+ LV+ + + I+TE + G+L +L L + + A IA
Sbjct: 61 LMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY--RWMAP 194
M + IHRDL+ N+L+++ L + K+ADFGLAR E E + +W AP
Sbjct: 121 GMAFIEERNYIHRDLRAANILVSDTL-SCKIADFGLARLIEDNEYTAREGAKFPIKWTAP 179
Query: 195 EL--YSTVTLRQG----------------------------EKKHYNHKNVRPSAENVPE 224
E Y T T++ + ++ VRP +N PE
Sbjct: 180 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP--DNCPE 237
Query: 225 ELSIILTSCWKEDPNARPNFTQIIQMLLNYLSA 257
EL ++ CWKE P RP F + +L ++ +A
Sbjct: 238 ELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 121/273 (44%), Gaps = 42/273 (15%)
Query: 18 KWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-VAIKIVHKGETPEEIAKKESRFAREVA 76
+W + + L + R+G G +V+ G Y T VA+K + +G + F E
Sbjct: 13 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG------SMSPDAFLAEAN 66
Query: 77 MLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
++ ++QH+ LV+ + + I+TE + G+L +L L + + A IA
Sbjct: 67 LMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 126
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY--RWMAP 194
M + IHRDL+ N+L+++ L + K+ADFGLAR E E + +W AP
Sbjct: 127 GMAFIEERNYIHRDLRAANILVSDTL-SCKIADFGLARLIEDNEXTAREGAKFPIKWTAP 185
Query: 195 EL--YSTVTLRQG----------------------------EKKHYNHKNVRPSAENVPE 224
E Y T T++ + ++ VRP +N PE
Sbjct: 186 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP--DNCPE 243
Query: 225 ELSIILTSCWKEDPNARPNFTQIIQMLLNYLSA 257
EL ++ CWKE P RP F + +L ++ +A
Sbjct: 244 ELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 276
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 121/273 (44%), Gaps = 42/273 (15%)
Query: 18 KWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-VAIKIVHKGETPEEIAKKESRFAREVA 76
+W + + L + R+G G +V+ G Y T VA+K + +G + F E
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG------SMSPDAFLAEAN 60
Query: 77 MLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
++ ++QH+ LV+ + + I+TE + G+L +L L + + A IA
Sbjct: 61 LMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY--RWMAP 194
M + IHRDL+ N+L+++ L + K+ADFGLAR E E + +W AP
Sbjct: 121 GMAFIEERNYIHRDLRAANILVSDTL-SCKIADFGLARLIEDNEXTAREGAKFPIKWTAP 179
Query: 195 EL--YSTVTLRQG----------------------------EKKHYNHKNVRPSAENVPE 224
E Y T T++ + ++ VRP +N PE
Sbjct: 180 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP--DNCPE 237
Query: 225 ELSIILTSCWKEDPNARPNFTQIIQMLLNYLSA 257
EL ++ CWKE P RP F + +L ++ +A
Sbjct: 238 ELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 121/273 (44%), Gaps = 42/273 (15%)
Query: 18 KWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-VAIKIVHKGETPEEIAKKESRFAREVA 76
+W + + L + R+G G +V+ G Y T VA+K + +G + F E
Sbjct: 2 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG------SMSPDAFLAEAN 55
Query: 77 MLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
++ ++QH+ LV+ + + I+TE + G+L +L L + + A IA
Sbjct: 56 LMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 115
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY--RWMAP 194
M + IHRDL+ N+L+++ L + K+ADFGLAR E E + +W AP
Sbjct: 116 GMAFIEERNYIHRDLRAANILVSDTL-SCKIADFGLARLIEDNEYTAREGAKFPIKWTAP 174
Query: 195 EL--YSTVTLRQG----------------------------EKKHYNHKNVRPSAENVPE 224
E Y T T++ + ++ VRP +N PE
Sbjct: 175 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP--DNCPE 232
Query: 225 ELSIILTSCWKEDPNARPNFTQIIQMLLNYLSA 257
EL ++ CWKE P RP F + +L ++ +A
Sbjct: 233 ELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 265
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 123/277 (44%), Gaps = 52/277 (18%)
Query: 17 AKWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQ-TVAIKIVHKGETPEEIAKKESRFAREV 75
W IDPK L +G G V GK++ Q VAIK++ +G E+ F E
Sbjct: 2 GSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED------EFIEEA 55
Query: 76 AMLSRVQHRNLVKFIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPR-----CLDVCVAIG 129
++ + H LV+ G C K+ + I+TE ++ G L YL MR R L++C
Sbjct: 56 KVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK--- 112
Query: 130 FALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGT- 188
D+ AME L S +HRDL N L+ D +K++DFGL+R L + T+ G+
Sbjct: 113 ---DVCEAMEYLESKQFLHRDLAARNCLVN-DQGVVKVSDFGLSR-YVLDDEYTSSRGSK 167
Query: 189 --YRWMAPE--LYSTVTLRQG--------------EKKHYNHKNVRPSAENVPEELSI-- 228
RW PE +YS + + K Y +AE++ + L +
Sbjct: 168 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR 227
Query: 229 ----------ILTSCWKEDPNARPNFTQIIQMLLNYL 255
I+ SCW E + RP F ++ +L+ +
Sbjct: 228 PHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVM 264
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 135/304 (44%), Gaps = 67/304 (22%)
Query: 12 ELKLDAKWLIDPKHLFVGPRIGEGAHAKVYE----GKYKNQ-----TVAIKIVHKGETPE 62
EL D KW L +G +GEGA +V G K++ TVA+K++ T +
Sbjct: 23 ELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK 82
Query: 63 EIAKKESRFAREVAMLSRV-QHRNLVKFIGACKE--PVMVIVTELLSGGTLRKYLLNMRP 119
++ S E+ M+ + +H+N++ +GAC + P+ VIV E S G LR+YL RP
Sbjct: 83 DL----SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLRARRP 137
Query: 120 RCLDVCVAI--------------GFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTI 165
++ I +AR ME L S IHRDL N+L+TE+ +
Sbjct: 138 PGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN-NVM 196
Query: 166 KLADFGLAREESLTEMMTAETGT---YRWMAPE-LYSTVTLRQGEKKHY----------- 210
K+ADFGLAR+ + + T +WMAPE L+ V Q + +
Sbjct: 197 KIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 211 ------------------NHKNVRPSAENVPEELSIILTSCWKEDPNARPNFTQIIQMLL 252
H+ +P+ N EL +++ CW P+ RP F Q+++ L
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRMDKPA--NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
Query: 253 NYLS 256
L+
Sbjct: 315 RILT 318
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 135/304 (44%), Gaps = 67/304 (22%)
Query: 12 ELKLDAKWLIDPKHLFVGPRIGEGAHAKVYE----GKYKNQ-----TVAIKIVHKGETPE 62
EL D KW L +G +GEGA +V G K++ TVA+K++ T +
Sbjct: 23 ELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK 82
Query: 63 EIAKKESRFAREVAMLSRV-QHRNLVKFIGACKE--PVMVIVTELLSGGTLRKYLLNMRP 119
++ S E+ M+ + +H+N++ +GAC + P+ VIV E S G LR+YL RP
Sbjct: 83 DL----SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLRARRP 137
Query: 120 RCLDVCVAIG--------------FALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTI 165
++ I +AR ME L S IHRDL N+L+TE+ +
Sbjct: 138 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN-NVM 196
Query: 166 KLADFGLAREESLTEMMTAETGT---YRWMAPE-LYSTVTLRQGEKKHY----------- 210
K+ADFGLAR+ + + T +WMAPE L+ V Q + +
Sbjct: 197 KIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 211 ------------------NHKNVRPSAENVPEELSIILTSCWKEDPNARPNFTQIIQMLL 252
H+ +P+ N EL +++ CW P+ RP F Q+++ L
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRMDKPA--NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
Query: 253 NYLS 256
L+
Sbjct: 315 RILT 318
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 120/272 (44%), Gaps = 42/272 (15%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-VAIKIVHKGETPEEIAKKESRFAREVAM 77
W + + L + R+G G +V+ G Y T VA+K + +G + F E +
Sbjct: 8 WEVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQG------SMSPDAFLAEANL 61
Query: 78 LSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARA 137
+ ++QH+ LV+ + + I+TE + G+L +L L + + A IA
Sbjct: 62 MKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 121
Query: 138 MECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY--RWMAPE 195
M + IHRDL+ N+L+++ L + K+ADFGLAR E E + +W APE
Sbjct: 122 MAFIEERNYIHRDLRAANILVSDTL-SCKIADFGLARLIEDAEXTAREGAKFPIKWTAPE 180
Query: 196 L--YSTVTLRQG----------------------------EKKHYNHKNVRPSAENVPEE 225
Y T T++ + ++ VRP +N PEE
Sbjct: 181 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP--DNCPEE 238
Query: 226 LSIILTSCWKEDPNARPNFTQIIQMLLNYLSA 257
L ++ CWKE P RP F + +L ++ +A
Sbjct: 239 LYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 120/267 (44%), Gaps = 44/267 (16%)
Query: 17 AKWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVA 76
+ W ++ K L + IG+G V G Y+ VA+K + T + F E +
Sbjct: 186 SGWALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQA-------FLAEAS 238
Query: 77 MLSRVQHRNLVKFIGACKEPV--MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDI 134
++++++H NLV+ +G E + IVTE ++ G+L YL + L + F+LD+
Sbjct: 239 VMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDV 298
Query: 135 ARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGT--YRWM 192
AME L + +HRDL N+L++ED K++DFGL +E S T+ +TG +W
Sbjct: 299 CEAMEYLEGNNFVHRDLAARNVLVSED-NVAKVSDFGLTKEASSTQ----DTGKLPVKWT 353
Query: 193 APE-------------------LYSTVTLRQGEKKHYNHKNVRPSAE---------NVPE 224
APE L+ + + K+V P E P
Sbjct: 354 APEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPP 413
Query: 225 ELSIILTSCWKEDPNARPNFTQIIQML 251
+ ++ +CW D RP F Q+ + L
Sbjct: 414 AVYDVMKNCWHLDAATRPTFLQLREQL 440
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 135/304 (44%), Gaps = 67/304 (22%)
Query: 12 ELKLDAKWLIDPKHLFVGPRIGEGAHAKVYE----GKYKNQ-----TVAIKIVHKGETPE 62
EL D KW L +G +GEGA +V G K++ TVA+K++ T +
Sbjct: 23 ELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK 82
Query: 63 EIAKKESRFAREVAMLSRV-QHRNLVKFIGACKE--PVMVIVTELLSGGTLRKYLLNMRP 119
++ S E+ M+ + +H+N++ +GAC + P+ VIV E S G LR+YL RP
Sbjct: 83 DL----SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLRARRP 137
Query: 120 RCLDVCVAIG--------------FALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTI 165
++ I +AR ME L S IHRDL N+L+TE+ +
Sbjct: 138 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN-NVM 196
Query: 166 KLADFGLAREESLTEMMTAETGT---YRWMAPE-LYSTVTLRQGEKKHY----------- 210
K+ADFGLAR+ + + T +WMAPE L+ V Q + +
Sbjct: 197 KIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 211 ------------------NHKNVRPSAENVPEELSIILTSCWKEDPNARPNFTQIIQMLL 252
H+ +P+ N EL +++ CW P+ RP F Q+++ L
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRMDKPA--NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
Query: 253 NYLS 256
L+
Sbjct: 315 RILT 318
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 121/267 (45%), Gaps = 44/267 (16%)
Query: 17 AKWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVA 76
+ W ++ K L + IG+G V G Y+ VA+K + T + F E +
Sbjct: 14 SGWALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQA-------FLAEAS 66
Query: 77 MLSRVQHRNLVKFIGACKEPV--MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDI 134
++++++H NLV+ +G E + IVTE ++ G+L YL + L + F+LD+
Sbjct: 67 VMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDV 126
Query: 135 ARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGT--YRWM 192
AME L + +HRDL N+L++ED K++DFGL +E S T+ +TG +W
Sbjct: 127 CEAMEYLEGNNFVHRDLAARNVLVSED-NVAKVSDFGLTKEASSTQ----DTGKLPVKWT 181
Query: 193 APE-------------------LYSTVTLRQGEKKHYNHKNVRPSAE---------NVPE 224
APE L+ + + K+V P E P
Sbjct: 182 APEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPP 241
Query: 225 ELSIILTSCWKEDPNARPNFTQIIQML 251
+ ++ +CW D RP+F Q+ + L
Sbjct: 242 AVYEVMKNCWHLDAAMRPSFLQLREQL 268
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 135/304 (44%), Gaps = 67/304 (22%)
Query: 12 ELKLDAKWLIDPKHLFVGPRIGEGAHAKVYE----GKYKNQ-----TVAIKIVHKGETPE 62
EL D KW L +G +GEGA +V G K++ TVA+K++ T +
Sbjct: 23 ELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK 82
Query: 63 EIAKKESRFAREVAMLSRV-QHRNLVKFIGACKE--PVMVIVTELLSGGTLRKYLLNMRP 119
++ S E+ M+ + +H+N++ +GAC + P+ VIV E S G LR+YL RP
Sbjct: 83 DL----SDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIV-EYASKGNLREYLRARRP 137
Query: 120 RCLDVCVAI--------------GFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTI 165
++ I +AR ME L S IHRDL N+L+TE+ +
Sbjct: 138 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN-NVM 196
Query: 166 KLADFGLAREESLTEMMTAETGT---YRWMAPE-LYSTVTLRQGEKKHY----------- 210
K+ADFGLAR+ + + T +WMAPE L+ V Q + +
Sbjct: 197 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 211 ------------------NHKNVRPSAENVPEELSIILTSCWKEDPNARPNFTQIIQMLL 252
H+ +P+ N EL +++ CW P+ RP F Q+++ L
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRMDKPA--NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
Query: 253 NYLS 256
L+
Sbjct: 315 RILT 318
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 120/265 (45%), Gaps = 44/265 (16%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W ++ K L + IG+G V G Y+ VA+K + T + F E +++
Sbjct: 1 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQA-------FLAEASVM 53
Query: 79 SRVQHRNLVKFIGACKEPV--MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
++++H NLV+ +G E + IVTE ++ G+L YL + L + F+LD+
Sbjct: 54 TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCE 113
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGT--YRWMAP 194
AME L + +HRDL N+L++ED K++DFGL +E S T+ +TG +W AP
Sbjct: 114 AMEYLEGNNFVHRDLAARNVLVSED-NVAKVSDFGLTKEASSTQ----DTGKLPVKWTAP 168
Query: 195 E-------------------LYSTVTLRQGEKKHYNHKNVRPSAE---------NVPEEL 226
E L+ + + K+V P E P +
Sbjct: 169 EALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAV 228
Query: 227 SIILTSCWKEDPNARPNFTQIIQML 251
++ +CW D RP+F Q+ + L
Sbjct: 229 YEVMKNCWHLDAAMRPSFLQLREQL 253
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 135/304 (44%), Gaps = 67/304 (22%)
Query: 12 ELKLDAKWLIDPKHLFVGPRIGEGAHAKVYE----GKYKNQ-----TVAIKIVHKGETPE 62
EL D KW L +G +GEGA +V G K++ TVA+K++ T +
Sbjct: 23 ELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK 82
Query: 63 EIAKKESRFAREVAMLSRV-QHRNLVKFIGACKE--PVMVIVTELLSGGTLRKYLLNMRP 119
++ S E+ M+ + +H+N++ +GAC + P+ VIV E S G LR+YL RP
Sbjct: 83 DL----SDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIV-EYASKGNLREYLRARRP 137
Query: 120 RCLDVCVAI--------------GFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTI 165
++ I +AR ME L S IHRDL N+L+TE+ +
Sbjct: 138 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN-NVM 196
Query: 166 KLADFGLAREESLTEMMTAETGT---YRWMAPE-LYSTVTLRQGEKKHY----------- 210
K+ADFGLAR+ + + T +WMAPE L+ V Q + +
Sbjct: 197 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 211 ------------------NHKNVRPSAENVPEELSIILTSCWKEDPNARPNFTQIIQMLL 252
H+ +P+ N EL +++ CW P+ RP F Q+++ L
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRMDKPA--NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
Query: 253 NYLS 256
L+
Sbjct: 315 RILT 318
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 135/304 (44%), Gaps = 67/304 (22%)
Query: 12 ELKLDAKWLIDPKHLFVGPRIGEGAHAKVYE----GKYKNQ-----TVAIKIVHKGETPE 62
EL D KW L +G +GEGA +V G K++ TVA+K++ T +
Sbjct: 23 ELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK 82
Query: 63 EIAKKESRFAREVAMLSRV-QHRNLVKFIGACKE--PVMVIVTELLSGGTLRKYLLNMRP 119
++ S E+ M+ + +H+N++ +GAC + P+ VIV E S G LR+YL RP
Sbjct: 83 DL----SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLRARRP 137
Query: 120 RCLDVCVAI--------------GFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTI 165
++ I +AR ME L S IHRDL N+L+TE+ +
Sbjct: 138 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN-NVM 196
Query: 166 KLADFGLAREESLTEMMTAETGT---YRWMAPE-LYSTVTLRQGEKKHY----------- 210
++ADFGLAR+ + + T +WMAPE L+ V Q + +
Sbjct: 197 RIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 211 ------------------NHKNVRPSAENVPEELSIILTSCWKEDPNARPNFTQIIQMLL 252
H+ +P+ N EL +++ CW P+ RP F Q+++ L
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRMDKPA--NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
Query: 253 NYLS 256
L+
Sbjct: 315 RILT 318
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 116/273 (42%), Gaps = 38/273 (13%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-VAIKIVHKGETPEEIAKKESRFAREVAM 77
W I + L + R+G G +V+ G + T VAIK + G E F E +
Sbjct: 4 WEIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPE------SFLEEAQI 57
Query: 78 LSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARA 137
+ +++H LV+ E + IVTE ++ G+L +L + R L + + A +A
Sbjct: 58 MKKLKHDKLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAG 117
Query: 138 MECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY--RWMAPE 195
M + IHRDL+ N+L+ L K+ADFGLAR E + + +W APE
Sbjct: 118 MAYIERMNYIHRDLRSANILVGNGL-ICKIADFGLARLIEDNEXTARQGAKFPIKWTAPE 176
Query: 196 --LYSTVTLRQG--------------EKKHYNHKNVR------------PSAENVPEELS 227
LY T++ + Y N R P ++ P L
Sbjct: 177 AALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPISLH 236
Query: 228 IILTSCWKEDPNARPNFTQIIQMLLNYLSAIAP 260
++ CWK+DP RP F + L +Y +A P
Sbjct: 237 ELMIHCWKKDPEERPTFEYLQSFLEDYFTATEP 269
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 130/299 (43%), Gaps = 67/299 (22%)
Query: 12 ELKLDAKWLIDPKHLFVGPRIGEGAHAKVY---------EGKYKNQTVAIKIVHKGETPE 62
EL D +W + L +G +GEGA +V + + VA+K++ T +
Sbjct: 16 ELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK 75
Query: 63 EIAKKESRFAREVAMLSRV-QHRNLVKFIGACKE--PVMVIVTELLSGGTLRKYLLNMRP 119
++ S E+ M+ + +H+N++ +GAC + P+ VIV E S G LR+YL P
Sbjct: 76 DL----SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLQAREP 130
Query: 120 RCLDVCVA--------------IGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTI 165
L+ + A +AR ME L S IHRDL N+L+TED +
Sbjct: 131 PGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED-NVM 189
Query: 166 KLADFGLAREESLTEMMTAETGT---YRWMAPE-LYSTVTLRQGEKKHY----------- 210
K+ADFGLAR+ + T +WMAPE L+ + Q + +
Sbjct: 190 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 249
Query: 211 ------------------NHKNVRPSAENVPEELSIILTSCWKEDPNARPNFTQIIQML 251
H+ +PS N EL +++ CW P+ RP F Q+++ L
Sbjct: 250 GSPYPGVPVEELFKLLKEGHRMDKPS--NCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 121/269 (44%), Gaps = 48/269 (17%)
Query: 18 KWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAM 77
KW ++ + + ++G G + +VY G +K ++ + + +T +E + F +E A+
Sbjct: 26 KWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAV----KTLKEDTMEVEEFLKEAAV 81
Query: 78 LSRVQHRNLVKFIGACK-EPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+ ++H NLV+ +G C EP IVTE + G L YL + V + A I+
Sbjct: 82 MKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISS 141
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGT-------- 188
AME L IHRDL N L+ E+ +K+ADFGL+R +MT +T T
Sbjct: 142 AMEYLEKKNFIHRDLAARNCLVGEN-HVVKVADFGLSR------LMTGDTYTAHAGAKFP 194
Query: 189 YRWMAPE--LYSTVTLRQG---------EKKHYN----------------HKNVR-PSAE 220
+W APE Y+T +++ E Y K R E
Sbjct: 195 IKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRMEQPE 254
Query: 221 NVPEELSIILTSCWKEDPNARPNFTQIIQ 249
P ++ ++ +CWK P RP+F + Q
Sbjct: 255 GCPPKVYELMRACWKWSPADRPSFAETHQ 283
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 118/273 (43%), Gaps = 38/273 (13%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-VAIKIVHKGETPEEIAKKESRFAREVAM 77
W I + L + ++G+G +V+ G + T VAIK + G E F +E +
Sbjct: 13 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA------FLQEAQV 66
Query: 78 LSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARA 137
+ +++H LV+ E + IVTE +S G+L +L + L + + A IA
Sbjct: 67 MKKIRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 138 MECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY--RWMAPE 195
M + +HRDL+ N+L+ E+L K+ADFGLAR E + + +W APE
Sbjct: 127 MAYVERMNYVHRDLRAANILVGENL-VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 196 --LYSTVTLR---------------QGEKKHYNHKNVR-----------PSAENVPEELS 227
LY T++ +G + N P PE L
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH 245
Query: 228 IILTSCWKEDPNARPNFTQIIQMLLNYLSAIAP 260
++ CW++DP RP F + L +Y ++ P
Sbjct: 246 DLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 278
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 121/273 (44%), Gaps = 42/273 (15%)
Query: 18 KWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-VAIKIVHKGETPEEIAKKESRFAREVA 76
+W + + L + R+G G +V+ G Y T VA+K + +G + F E
Sbjct: 3 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG------SMSPDAFLAEAN 56
Query: 77 MLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
++ ++QH+ LV+ + + I+TE + G+L +L L + + A IA
Sbjct: 57 LMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 116
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY--RWMAP 194
M + IHR+L+ N+L+++ L + K+ADFGLAR E E + +W AP
Sbjct: 117 GMAFIEERNYIHRNLRAANILVSDTL-SCKIADFGLARLIEDNEYTAREGAKFPIKWTAP 175
Query: 195 EL--YSTVTLRQG----------------------------EKKHYNHKNVRPSAENVPE 224
E Y T T++ + ++ VRP +N PE
Sbjct: 176 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP--DNCPE 233
Query: 225 ELSIILTSCWKEDPNARPNFTQIIQMLLNYLSA 257
EL ++ CWKE P RP F + +L ++ +A
Sbjct: 234 ELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 266
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 134/304 (44%), Gaps = 67/304 (22%)
Query: 12 ELKLDAKWLIDPKHLFVGPRIGEGAHAKVYE----GKYKNQ-----TVAIKIVHKGETPE 62
EL D KW L +G +GEGA +V G K++ TVA+K++ T +
Sbjct: 23 ELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK 82
Query: 63 EIAKKESRFAREVAMLSRV-QHRNLVKFIGACKE--PVMVIVTELLSGGTLRKYLLNMRP 119
++ S E+ M+ + +H+N++ +GAC + P+ VIV S G LR+YL RP
Sbjct: 83 DL----SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVA-YASKGNLREYLRARRP 137
Query: 120 RCLDVCVAIG--------------FALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTI 165
++ I +AR ME L S IHRDL N+L+TE+ +
Sbjct: 138 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN-NVM 196
Query: 166 KLADFGLAREESLTEMMTAETGT---YRWMAPE-LYSTVTLRQGEKKHY----------- 210
K+ADFGLAR+ + + T +WMAPE L+ V Q + +
Sbjct: 197 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 211 ------------------NHKNVRPSAENVPEELSIILTSCWKEDPNARPNFTQIIQMLL 252
H+ +P+ N EL +++ CW P+ RP F Q+++ L
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRMDKPA--NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
Query: 253 NYLS 256
L+
Sbjct: 315 RILT 318
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 134/304 (44%), Gaps = 67/304 (22%)
Query: 12 ELKLDAKWLIDPKHLFVGPRIGEGAHAKVYE----GKYKNQ-----TVAIKIVHKGETPE 62
EL D KW L +G +GEG +V G K++ TVA+K++ T +
Sbjct: 15 ELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK 74
Query: 63 EIAKKESRFAREVAMLSRV-QHRNLVKFIGACKE--PVMVIVTELLSGGTLRKYLLNMRP 119
++ S E+ M+ + +H+N++ +GAC + P+ VIV E S G LR+YL RP
Sbjct: 75 DL----SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLRARRP 129
Query: 120 RCLDVCVAIG--------------FALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTI 165
++ I +AR ME L S IHRDL N+L+TE+ +
Sbjct: 130 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN-NVM 188
Query: 166 KLADFGLAREESLTEMMTAETGT---YRWMAPE-LYSTVTLRQGEKKHY----------- 210
K+ADFGLAR+ + + T +WMAPE L+ V Q + +
Sbjct: 189 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 248
Query: 211 ------------------NHKNVRPSAENVPEELSIILTSCWKEDPNARPNFTQIIQMLL 252
H+ +P+ N EL +++ CW P+ RP F Q+++ L
Sbjct: 249 GSPYPGIPVEELFKLLKEGHRMDKPA--NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 306
Query: 253 NYLS 256
L+
Sbjct: 307 RILT 310
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 120/275 (43%), Gaps = 39/275 (14%)
Query: 15 LDAKWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-VAIKIVHKGETPEEIAKKESRFAR 73
+D W I + + + ++G G +V+ G Y N T VA+K + G + F
Sbjct: 3 MDPAWEIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQ------AFLE 56
Query: 74 EVAMLSRVQHRNLVKFIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFAL 132
E ++ +QH LV+ KE + I+TE ++ G+L +L + + + I F+
Sbjct: 57 EANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSA 116
Query: 133 DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY--R 190
IA M + IHRDL+ N+L++E L K+ADFGLAR E E + +
Sbjct: 117 QIAEGMAYIERKNYIHRDLRAANVLVSESL-MCKIADFGLARVIEDNEYTAREGAKFPIK 175
Query: 191 WMAPE-------------------LYSTVTLRQGEKKHYNHKNV---------RPSAENV 222
W APE LY VT + + +V P EN
Sbjct: 176 WTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRMENC 235
Query: 223 PEELSIILTSCWKEDPNARPNFTQIIQMLLNYLSA 257
P+EL I+ CWKE RP F + +L ++ +A
Sbjct: 236 PDELYDIMKMCWKEKAEERPTFDYLQSVLDDFYTA 270
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 134/304 (44%), Gaps = 67/304 (22%)
Query: 12 ELKLDAKWLIDPKHLFVGPRIGEGAHAKVYE----GKYKNQ-----TVAIKIVHKGETPE 62
EL D KW L +G +GEG +V G K++ TVA+K++ T +
Sbjct: 12 ELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK 71
Query: 63 EIAKKESRFAREVAMLSRV-QHRNLVKFIGACKE--PVMVIVTELLSGGTLRKYLLNMRP 119
++ S E+ M+ + +H+N++ +GAC + P+ VIV E S G LR+YL RP
Sbjct: 72 DL----SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLRARRP 126
Query: 120 RCLDVCVAI--------------GFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTI 165
++ I +AR ME L S IHRDL N+L+TE+ +
Sbjct: 127 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN-NVM 185
Query: 166 KLADFGLAREESLTEMMTAETGT---YRWMAPE-LYSTVTLRQGEKKHY----------- 210
K+ADFGLAR+ + + T +WMAPE L+ V Q + +
Sbjct: 186 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 245
Query: 211 ------------------NHKNVRPSAENVPEELSIILTSCWKEDPNARPNFTQIIQMLL 252
H+ +P+ N EL +++ CW P+ RP F Q+++ L
Sbjct: 246 GSPYPGIPVEELFKLLKEGHRMDKPA--NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 303
Query: 253 NYLS 256
L+
Sbjct: 304 RILT 307
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 134/304 (44%), Gaps = 67/304 (22%)
Query: 12 ELKLDAKWLIDPKHLFVGPRIGEGAHAKVYE----GKYKNQ-----TVAIKIVHKGETPE 62
EL D KW L +G +GEG +V G K++ TVA+K++ T +
Sbjct: 69 ELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK 128
Query: 63 EIAKKESRFAREVAMLSRV-QHRNLVKFIGACKE--PVMVIVTELLSGGTLRKYLLNMRP 119
++ S E+ M+ + +H+N++ +GAC + P+ VIV E S G LR+YL RP
Sbjct: 129 DL----SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLRARRP 183
Query: 120 RCLDVCVAI--------------GFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTI 165
++ I +AR ME L S IHRDL N+L+TE+ +
Sbjct: 184 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN-NVM 242
Query: 166 KLADFGLAREESLTEMMTAETGT---YRWMAPE-LYSTVTLRQGEKKHY----------- 210
K+ADFGLAR+ + + T +WMAPE L+ V Q + +
Sbjct: 243 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 302
Query: 211 ------------------NHKNVRPSAENVPEELSIILTSCWKEDPNARPNFTQIIQMLL 252
H+ +P+ N EL +++ CW P+ RP F Q+++ L
Sbjct: 303 GSPYPGIPVEELFKLLKEGHRMDKPA--NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 360
Query: 253 NYLS 256
L+
Sbjct: 361 RILT 364
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 122/273 (44%), Gaps = 52/273 (19%)
Query: 21 IDPKHLFVGPRIGEGAHAKVYEGKYKNQ-TVAIKIVHKGETPEEIAKKESRFAREVAMLS 79
IDPK L +G G V GK++ Q VAIK++ +G E+ F E ++
Sbjct: 1 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED------EFIEEAKVMM 54
Query: 80 RVQHRNLVKFIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPR-----CLDVCVAIGFALD 133
+ H LV+ G C K+ + I+TE ++ G L YL MR R L++C D
Sbjct: 55 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK------D 108
Query: 134 IARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGT---YR 190
+ AME L S +HRDL N L+ D +K++DFGL+R L + T+ G+ R
Sbjct: 109 VCEAMEYLESKQFLHRDLAARNCLVN-DQGVVKVSDFGLSR-YVLDDEYTSSVGSKFPVR 166
Query: 191 WMAPE--LYSTVTLRQG--------------EKKHYNHKNVRPSAENVPEELSI------ 228
W PE +YS + + K Y +AE++ + L +
Sbjct: 167 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLA 226
Query: 229 ------ILTSCWKEDPNARPNFTQIIQMLLNYL 255
I+ SCW E + RP F ++ +L+ +
Sbjct: 227 SEKVYTIMYSCWHEKADERPTFKILLSNILDVM 259
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 134/304 (44%), Gaps = 67/304 (22%)
Query: 12 ELKLDAKWLIDPKHLFVGPRIGEGAHAKVYE----GKYKNQ-----TVAIKIVHKGETPE 62
EL D KW L +G +GEG +V G K++ TVA+K++ T +
Sbjct: 10 ELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK 69
Query: 63 EIAKKESRFAREVAMLSRV-QHRNLVKFIGACKE--PVMVIVTELLSGGTLRKYLLNMRP 119
++ S E+ M+ + +H+N++ +GAC + P+ VIV E S G LR+YL RP
Sbjct: 70 DL----SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLRARRP 124
Query: 120 RCLDVCVAIG--------------FALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTI 165
++ I +AR ME L S IHRDL N+L+TE+ +
Sbjct: 125 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTEN-NVM 183
Query: 166 KLADFGLAREESLTEMMTAETGT---YRWMAPE-LYSTVTLRQGEKKHY----------- 210
K+ADFGLAR+ + + T +WMAPE L+ V Q + +
Sbjct: 184 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 243
Query: 211 ------------------NHKNVRPSAENVPEELSIILTSCWKEDPNARPNFTQIIQMLL 252
H+ +P+ N EL +++ CW P+ RP F Q+++ L
Sbjct: 244 GSPYPGIPVEELFKLLKEGHRMDKPA--NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 301
Query: 253 NYLS 256
L+
Sbjct: 302 RILT 305
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 118/273 (43%), Gaps = 38/273 (13%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-VAIKIVHKGETPEEIAKKESRFAREVAM 77
W I + L + ++G+G +V+ G + T VAIK + G E F +E +
Sbjct: 4 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA------FLQEAQV 57
Query: 78 LSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARA 137
+ +++H LV+ E + IVTE +S G+L +L + L + + A IA
Sbjct: 58 MKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG 117
Query: 138 MECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY--RWMAPE 195
M + +HRDL+ N+L+ E+L K+ADFGLAR E + + +W APE
Sbjct: 118 MAYVERMNYVHRDLRAANILVGENL-VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 176
Query: 196 --LYSTVTLR---------------QGEKKHYNHKNVR-----------PSAENVPEELS 227
LY T++ +G + N P PE L
Sbjct: 177 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH 236
Query: 228 IILTSCWKEDPNARPNFTQIIQMLLNYLSAIAP 260
++ CW++DP RP F + L +Y ++ P
Sbjct: 237 DLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 269
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 118/273 (43%), Gaps = 38/273 (13%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-VAIKIVHKGETPEEIAKKESRFAREVAM 77
W I + L + ++G+G +V+ G + T VAIK + G E F +E +
Sbjct: 13 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA------FLQEAQV 66
Query: 78 LSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARA 137
+ +++H LV+ E + IVTE +S G+L +L + L + + A IA
Sbjct: 67 MKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 138 MECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY--RWMAPE 195
M + +HRDL+ N+L+ E+L K+ADFGLAR E + + +W APE
Sbjct: 127 MAYVERMNYVHRDLRAANILVGENL-VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 196 --LYSTVTLR---------------QGEKKHYNHKNVR-----------PSAENVPEELS 227
LY T++ +G + N P PE L
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH 245
Query: 228 IILTSCWKEDPNARPNFTQIIQMLLNYLSAIAP 260
++ CW++DP RP F + L +Y ++ P
Sbjct: 246 DLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 278
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 134/304 (44%), Gaps = 67/304 (22%)
Query: 12 ELKLDAKWLIDPKHLFVGPRIGEGAHAKVYE----GKYKNQ-----TVAIKIVHKGETPE 62
EL D KW L +G +GEGA +V G K++ TVA+K++ T +
Sbjct: 23 ELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK 82
Query: 63 EIAKKESRFAREVAMLSRV-QHRNLVKFIGACKE--PVMVIVTELLSGGTLRKYLLNMRP 119
++ S E+ M+ + +H+N++ +GAC + P+ VIV S G LR+YL RP
Sbjct: 83 DL----SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVG-YASKGNLREYLRARRP 137
Query: 120 RCLDVCVAIG--------------FALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTI 165
++ I +AR ME L S IHRDL N+L+TE+ +
Sbjct: 138 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN-NVM 196
Query: 166 KLADFGLAREESLTEMMTAETGT---YRWMAPE-LYSTVTLRQGEKKHY----------- 210
K+ADFGLAR+ + + T +WMAPE L+ V Q + +
Sbjct: 197 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 211 ------------------NHKNVRPSAENVPEELSIILTSCWKEDPNARPNFTQIIQMLL 252
H+ +P+ N EL +++ CW P+ RP F Q+++ L
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRMDKPA--NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
Query: 253 NYLS 256
L+
Sbjct: 315 RILT 318
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 118/273 (43%), Gaps = 38/273 (13%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-VAIKIVHKGETPEEIAKKESRFAREVAM 77
W I + L + ++G+G +V+ G + T VAIK + G E F +E +
Sbjct: 2 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA------FLQEAQV 55
Query: 78 LSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARA 137
+ +++H LV+ E + IVTE +S G+L +L + L + + A IA
Sbjct: 56 MKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG 115
Query: 138 MECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY--RWMAPE 195
M + +HRDL+ N+L+ E+L K+ADFGLAR E + + +W APE
Sbjct: 116 MAYVERMNYVHRDLRAANILVGENL-VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 174
Query: 196 --LYSTVTLR---------------QGEKKHYNHKNVR-----------PSAENVPEELS 227
LY T++ +G + N P PE L
Sbjct: 175 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH 234
Query: 228 IILTSCWKEDPNARPNFTQIIQMLLNYLSAIAP 260
++ CW++DP RP F + L +Y ++ P
Sbjct: 235 DLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 267
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 119/278 (42%), Gaps = 56/278 (20%)
Query: 20 LIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-VAIKIVHKGETPEEIAKKESRFAREVAML 78
+IDP L IG G V+ G + N+ VAIK + +G EE F E ++
Sbjct: 3 VIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE------DFIEEAEVM 56
Query: 79 SRVQHRNLVKFIGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARA 137
++ H LV+ G C E + +V E + G L YL R +G LD+
Sbjct: 57 MKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG-LFAAETLLGMCLDVCEG 115
Query: 138 MECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGT---YRWMAP 194
M L +IHRDL N L+ E+ + IK++DFG+ R L + T+ TGT +W +P
Sbjct: 116 MAYLEEASVIHRDLAARNCLVGEN-QVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASP 173
Query: 195 ELYSTV-----------------TLRQGEKKHYNHKNVRPSAENVPEELSI--------- 228
E++S +G+ + N N V E++S
Sbjct: 174 EVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-----SEVVEDISTGFRLYKPRL 228
Query: 229 -------ILTSCWKEDPNARPNFTQIIQMLLNYLSAIA 259
I+ CWKE P RP F++ LL L+AIA
Sbjct: 229 ASTHVYQIMNHCWKERPEDRPAFSR----LLRQLAAIA 262
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 116/268 (43%), Gaps = 61/268 (22%)
Query: 32 IGEGAHAKVYEGKYKNQ-TVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKFI 90
+G G V GK+K Q VA+K++ +G E+ F +E + ++ H LVKF
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSED------EFFQEAQTMMKLSHPKLVKFY 69
Query: 91 GAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIHR 149
G C KE + IVTE +S G L YL + + L+ + D+ M L SH IHR
Sbjct: 70 GVCSKEYPIYIVTEYISNGCLLNYLRS-HGKGLEPSQLLEMCYDVCEGMAFLESHQFIHR 128
Query: 150 DLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGT---YRWMAPELY--------- 197
DL N L+ DL +K++DFG+ R L + + GT +W APE++
Sbjct: 129 DLAARNCLVDRDL-CVKVSDFGMTR-YVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKS 186
Query: 198 -------------------------STVTLRQGEKKHYNHKNVRPSAENVPEELSIILTS 232
S V L+ + H+ RP + + + I+ S
Sbjct: 187 DVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQ----GHRLYRPHLAS--DTIYQIMYS 240
Query: 233 CWKEDPNARPNFTQIIQMLLNYLSAIAP 260
CW E P RP F Q+ LS+I P
Sbjct: 241 CWHELPEKRPTFQQL-------LSSIEP 261
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 117/273 (42%), Gaps = 38/273 (13%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-VAIKIVHKGETPEEIAKKESRFAREVAM 77
W I + L + ++G+G +V+ G + T VAIK + G E F +E +
Sbjct: 13 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA------FLQEAQV 66
Query: 78 LSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARA 137
+ +++H LV+ E + IVTE +S G L +L + L + + A IA
Sbjct: 67 MKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 138 MECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY--RWMAPE 195
M + +HRDL+ N+L+ E+L K+ADFGLAR E + + +W APE
Sbjct: 127 MAYVERMNYVHRDLRAANILVGENL-VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 196 --LYSTVTLR---------------QGEKKHYNHKNVR-----------PSAENVPEELS 227
LY T++ +G + N P PE L
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH 245
Query: 228 IILTSCWKEDPNARPNFTQIIQMLLNYLSAIAP 260
++ CW++DP RP F + L +Y ++ P
Sbjct: 246 DLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 278
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 117/273 (42%), Gaps = 38/273 (13%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-VAIKIVHKGETPEEIAKKESRFAREVAM 77
W I + L + ++G+G +V+ G + T VAIK + G E F +E +
Sbjct: 13 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA------FLQEAQV 66
Query: 78 LSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARA 137
+ +++H LV+ E + IVTE +S G+L +L + L + + A IA
Sbjct: 67 MKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 138 MECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY--RWMAPE 195
M + +HRDL N+L+ E+L K+ADFGLAR E + + +W APE
Sbjct: 127 MAYVERMNYVHRDLAAANILVGENL-VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 196 --LYSTVTLR---------------QGEKKHYNHKNVR-----------PSAENVPEELS 227
LY T++ +G + N P PE L
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH 245
Query: 228 IILTSCWKEDPNARPNFTQIIQMLLNYLSAIAP 260
++ CW++DP RP F + L +Y ++ P
Sbjct: 246 DLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 278
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 117/273 (42%), Gaps = 38/273 (13%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-VAIKIVHKGETPEEIAKKESRFAREVAM 77
W I + L + ++G+G +V+ G + T VAIK + G E F +E +
Sbjct: 180 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEA------FLQEAQV 233
Query: 78 LSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARA 137
+ +++H LV+ E + IVTE +S G+L +L + L + + A IA
Sbjct: 234 MKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG 293
Query: 138 MECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY--RWMAPE 195
M + +HRDL+ N+L+ E+L K+ADFGL R E + + +W APE
Sbjct: 294 MAYVERMNYVHRDLRAANILVGENL-VCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPE 352
Query: 196 --LYSTVTLR---------------QGEKKHYNHKNVR-----------PSAENVPEELS 227
LY T++ +G + N P PE L
Sbjct: 353 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH 412
Query: 228 IILTSCWKEDPNARPNFTQIIQMLLNYLSAIAP 260
++ CW++DP RP F + L +Y ++ P
Sbjct: 413 DLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 445
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 118/271 (43%), Gaps = 39/271 (14%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-VAIKIVHKGETPEEIAKKESRFAREVAM 77
W I + + + R+G G +V+ G Y N T VA+K + G + F E +
Sbjct: 8 WEIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA------FLEEANL 61
Query: 78 LSRVQHRNLVKFIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+ +QH LV+ +E + I+TE ++ G+L +L + + + I F+ IA
Sbjct: 62 MKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAE 121
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY--RWMAP 194
M + IHRDL+ N+L++E L K+ADFGLAR E E + +W AP
Sbjct: 122 GMAYIERKNYIHRDLRAANVLVSESL-MCKIADFGLARVIEDNEYTAREGAKFPIKWTAP 180
Query: 195 E-------------------LYSTVTLRQGEKKHYNHKNV---------RPSAENVPEEL 226
E LY VT + + +V P EN P+EL
Sbjct: 181 EAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPRVENCPDEL 240
Query: 227 SIILTSCWKEDPNARPNFTQIIQMLLNYLSA 257
I+ CWKE RP F + +L ++ +A
Sbjct: 241 YDIMKMCWKEKAEERPTFDYLQSVLDDFYTA 271
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 116/270 (42%), Gaps = 52/270 (19%)
Query: 20 LIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-VAIKIVHKGETPEEIAKKESRFAREVAML 78
+IDP L IG G V+ G + N+ VAIK + +G EE F E ++
Sbjct: 3 VIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE------DFIEEAEVM 56
Query: 79 SRVQHRNLVKFIGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARA 137
++ H LV+ G C E + +V E + G L YL R +G LD+
Sbjct: 57 MKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG-LFAAETLLGMCLDVCEG 115
Query: 138 MECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGT---YRWMAP 194
M L +IHRDL N L+ E+ + IK++DFG+ R L + T+ TGT +W +P
Sbjct: 116 MAYLEEACVIHRDLAARNCLVGEN-QVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASP 173
Query: 195 ELYSTV-----------------TLRQGEKKHYNHKNVRPSAENVPEELSI--------- 228
E++S +G+ + N N V E++S
Sbjct: 174 EVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-----SEVVEDISTGFRLYKPRL 228
Query: 229 -------ILTSCWKEDPNARPNFTQIIQML 251
I+ CWKE P RP F+++++ L
Sbjct: 229 ASTHVYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 118/273 (43%), Gaps = 38/273 (13%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-VAIKIVHKGETPEEIAKKESRFAREVAM 77
W I + L + ++G+G +V+ G + T VAIK + G E F +E +
Sbjct: 6 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA------FLQEAQV 59
Query: 78 LSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARA 137
+ +++H LV+ E + IVTE +S G+L +L + L + + A IA
Sbjct: 60 MKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASG 119
Query: 138 MECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY--RWMAPE 195
M + +HRDL+ N+L+ E+L K+ADFGLAR E + + +W APE
Sbjct: 120 MAYVERMNYVHRDLRAANILVGENL-VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 178
Query: 196 --LYSTVTLR---------------QGEKKHYNHKNVR-----------PSAENVPEELS 227
LY T++ +G + N P PE L
Sbjct: 179 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH 238
Query: 228 IILTSCWKEDPNARPNFTQIIQMLLNYLSAIAP 260
++ CW+++P RP F + L +Y ++ P
Sbjct: 239 DLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 271
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 116/270 (42%), Gaps = 52/270 (19%)
Query: 20 LIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-VAIKIVHKGETPEEIAKKESRFAREVAML 78
+IDP L IG G V+ G + N+ VAIK + +G EE F E ++
Sbjct: 1 VIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE------DFIEEAEVM 54
Query: 79 SRVQHRNLVKFIGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARA 137
++ H LV+ G C E + +V E + G L YL R +G LD+
Sbjct: 55 MKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG-LFAAETLLGMCLDVCEG 113
Query: 138 MECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGT---YRWMAP 194
M L +IHRDL N L+ E+ + IK++DFG+ R L + T+ TGT +W +P
Sbjct: 114 MAYLEEACVIHRDLAARNCLVGEN-QVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASP 171
Query: 195 ELYSTV-----------------TLRQGEKKHYNHKNVRPSAENVPEELSI--------- 228
E++S +G+ + N N V E++S
Sbjct: 172 EVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-----SEVVEDISTGFRLYKPRL 226
Query: 229 -------ILTSCWKEDPNARPNFTQIIQML 251
I+ CWKE P RP F+++++ L
Sbjct: 227 ASTHVYQIMNHCWKERPEDRPAFSRLLRQL 256
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 118/273 (43%), Gaps = 38/273 (13%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-VAIKIVHKGETPEEIAKKESRFAREVAM 77
W I + L + ++G+G +V+ G + T VAIK + G E F +E +
Sbjct: 262 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA------FLQEAQV 315
Query: 78 LSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARA 137
+ +++H LV+ E + IVTE +S G+L +L + L + + A IA
Sbjct: 316 MKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASG 375
Query: 138 MECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY--RWMAPE 195
M + +HRDL+ N+L+ E+L K+ADFGLAR E + + +W APE
Sbjct: 376 MAYVERMNYVHRDLRAANILVGENL-VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 434
Query: 196 --LYSTVTLR---------------QGEKKHYNHKNVR-----------PSAENVPEELS 227
LY T++ +G + N P PE L
Sbjct: 435 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH 494
Query: 228 IILTSCWKEDPNARPNFTQIIQMLLNYLSAIAP 260
++ CW+++P RP F + L +Y ++ P
Sbjct: 495 DLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 527
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 118/273 (43%), Gaps = 38/273 (13%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-VAIKIVHKGETPEEIAKKESRFAREVAM 77
W I + L + ++G+G +V+ G + T VAIK + G E F +E +
Sbjct: 3 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA------FLQEAQV 56
Query: 78 LSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARA 137
+ +++H LV+ E + IVTE +S G+L +L + L + + A IA
Sbjct: 57 MKKLRHEKLVQLYAVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASG 116
Query: 138 MECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY--RWMAPE 195
M + +HRDL+ N+L+ E+L K+ADFGLAR E + + +W APE
Sbjct: 117 MAYVERMNYVHRDLRAANILVGENL-VCKVADFGLARLIEDNEXTARQGAKFPIKWTAPE 175
Query: 196 --LYSTVTLR---------------QGEKKHYNHKNVR-----------PSAENVPEELS 227
LY T++ +G + N P PE L
Sbjct: 176 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH 235
Query: 228 IILTSCWKEDPNARPNFTQIIQMLLNYLSAIAP 260
++ CW+++P RP F + L +Y ++ P
Sbjct: 236 DLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 268
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 117/273 (42%), Gaps = 38/273 (13%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-VAIKIVHKGETPEEIAKKESRFAREVAM 77
W I + L + ++G+G +V+ G + T VAIK + G E F +E +
Sbjct: 13 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA------FLQEAQV 66
Query: 78 LSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARA 137
+ +++H LV+ E + IV E +S G+L +L + L + + A IA
Sbjct: 67 MKKLRHEKLVQLYAVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 138 MECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY--RWMAPE 195
M + +HRDL+ N+L+ E+L K+ADFGLAR E + + +W APE
Sbjct: 127 MAYVERMNYVHRDLRAANILVGENL-VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 196 --LYSTVTLR---------------QGEKKHYNHKNVR-----------PSAENVPEELS 227
LY T++ +G + N P PE L
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH 245
Query: 228 IILTSCWKEDPNARPNFTQIIQMLLNYLSAIAP 260
++ CW++DP RP F + L +Y ++ P
Sbjct: 246 DLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 278
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 117/273 (42%), Gaps = 38/273 (13%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-VAIKIVHKGETPEEIAKKESRFAREVAM 77
W I + L + ++G+G +V+ G + T VAIK + G E F +E +
Sbjct: 13 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA------FLQEAQV 66
Query: 78 LSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARA 137
+ +++H LV+ E + IV E +S G+L +L + L + + A IA
Sbjct: 67 MKKLRHEKLVQLYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 138 MECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY--RWMAPE 195
M + +HRDL+ N+L+ E+L K+ADFGLAR E + + +W APE
Sbjct: 127 MAYVERMNYVHRDLRAANILVGENL-VCKVADFGLARLIEDNEXTARQGAKFPIKWTAPE 185
Query: 196 --LYSTVTLR---------------QGEKKHYNHKNVR-----------PSAENVPEELS 227
LY T++ +G + N P PE L
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH 245
Query: 228 IILTSCWKEDPNARPNFTQIIQMLLNYLSAIAP 260
++ CW++DP RP F + L +Y ++ P
Sbjct: 246 DLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 278
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 118/273 (43%), Gaps = 38/273 (13%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-VAIKIVHKGETPEEIAKKESRFAREVAM 77
W I + L + ++G+G +V+ G + T VAIK + G E F +E +
Sbjct: 179 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA------FLQEAQV 232
Query: 78 LSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARA 137
+ +++H LV+ E + IVTE +S G+L +L + L + + A IA
Sbjct: 233 MKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASG 292
Query: 138 MECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY--RWMAPE 195
M + +HRDL+ N+L+ E+L K+ADFGLAR E + + +W APE
Sbjct: 293 MAYVERMNYVHRDLRAANILVGENL-VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 351
Query: 196 --LYSTVTLR---------------QGEKKHYNHKNVR-----------PSAENVPEELS 227
LY T++ +G + N P PE L
Sbjct: 352 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH 411
Query: 228 IILTSCWKEDPNARPNFTQIIQMLLNYLSAIAP 260
++ CW+++P RP F + L +Y ++ P
Sbjct: 412 DLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 444
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 118/273 (43%), Gaps = 38/273 (13%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-VAIKIVHKGETPEEIAKKESRFAREVAM 77
W I + L + ++G+G +V+ G + T VAIK + G E F +E +
Sbjct: 179 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA------FLQEAQV 232
Query: 78 LSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARA 137
+ +++H LV+ E + IVTE +S G+L +L + L + + A IA
Sbjct: 233 MKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASG 292
Query: 138 MECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY--RWMAPE 195
M + +HRDL+ N+L+ E+L K+ADFGLAR E + + +W APE
Sbjct: 293 MAYVERMNYVHRDLRAANILVGENL-VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 351
Query: 196 --LYSTVTLR---------------QGEKKHYNHKNVR-----------PSAENVPEELS 227
LY T++ +G + N P PE L
Sbjct: 352 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH 411
Query: 228 IILTSCWKEDPNARPNFTQIIQMLLNYLSAIAP 260
++ CW+++P RP F + L +Y ++ P
Sbjct: 412 DLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 444
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 117/273 (42%), Gaps = 38/273 (13%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-VAIKIVHKGETPEEIAKKESRFAREVAM 77
W I + L + ++G+G +V+ G + T VAIK + G E F +E +
Sbjct: 13 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA------FLQEAQV 66
Query: 78 LSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARA 137
+ +++H LV+ E + IV E +S G+L +L + L + + A IA
Sbjct: 67 MKKLRHEKLVQLYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 138 MECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY--RWMAPE 195
M + +HRDL+ N+L+ E+L K+ADFGLAR E + + +W APE
Sbjct: 127 MAYVERMNYVHRDLRAANILVGENL-VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 196 --LYSTVTLR---------------QGEKKHYNHKNVR-----------PSAENVPEELS 227
LY T++ +G + N P PE L
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH 245
Query: 228 IILTSCWKEDPNARPNFTQIIQMLLNYLSAIAP 260
++ CW++DP RP F + L +Y ++ P
Sbjct: 246 DLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 278
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 131/296 (44%), Gaps = 72/296 (24%)
Query: 16 DAKWLIDPKHLFVGPRIGEGAHAKV-------YEGKYKNQTVAIKIVHKGETPEEIAKKE 68
D KW K+L +G +GEG KV +G+ TVA+K++ + +P E+
Sbjct: 15 DPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLL 74
Query: 69 SRFAREVAMLSRVQHRNLVKFIGACKE--PVMVIVTELLSGGTLRKYLLNMRP------- 119
S F +L +V H +++K GAC + P+++IV E G+LR +L R
Sbjct: 75 SEFN----VLKQVNHPHVIKLYGACSQDGPLLLIV-EYAKYGSLRGFLRESRKVGPGYLG 129
Query: 120 ---------------RCLDVCVAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKT 164
R L + I FA I++ M+ L ++HRDL N+L+ E K
Sbjct: 130 SGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRK- 188
Query: 165 IKLADFGLAR---EESLTEMMTAETGTYRWMAPE-------------------LYSTVTL 202
+K++DFGL+R EE + +WMA E L+ VTL
Sbjct: 189 MKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTL 248
Query: 203 RQG------EKKHYN-----HKNVRPSAENVPEELSIILTSCWKEDPNARPNFTQI 247
++ +N H+ RP +N EE+ ++ CWK++P+ RP F I
Sbjct: 249 GGNPYPGIPPERLFNLLKTGHRMERP--DNCSEEMYRLMLQCWKQEPDKRPVFADI 302
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 120/261 (45%), Gaps = 39/261 (14%)
Query: 21 IDPKHLFVGPRIGEGAHAKVYEGKY---KNQTVAIKI-VHKGETPEEIAKKESRFAREVA 76
I + + +G IGEG V++G Y +N +A+ I K T + + +K F +E
Sbjct: 35 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREK---FLQEAL 91
Query: 77 MLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+ + H ++VK IG E + I+ EL + G LR +L +R LD+ I +A ++
Sbjct: 92 TMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFL-QVRKYSLDLASLILYAYQLST 150
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY--RWMAP 194
A+ L S +HRD+ N+L++ + +KL DFGL+R + A G +WMAP
Sbjct: 151 ALAYLESKRFVHRDIAARNVLVSSN-DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 209
Query: 195 E-----LYSTVT------------LRQGEKKHYNHKNVR-----------PSAENVPEEL 226
E +++ + L G K KN P N P L
Sbjct: 210 ESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTL 269
Query: 227 SIILTSCWKEDPNARPNFTQI 247
++T CW DP+ RP FT++
Sbjct: 270 YSLMTKCWAYDPSRRPRFTEL 290
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 120/261 (45%), Gaps = 39/261 (14%)
Query: 21 IDPKHLFVGPRIGEGAHAKVYEGKY---KNQTVAIKI-VHKGETPEEIAKKESRFAREVA 76
I + + +G IGEG V++G Y +N +A+ I K T + + +K F +E
Sbjct: 7 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREK---FLQEAL 63
Query: 77 MLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+ + H ++VK IG E + I+ EL + G LR +L +R LD+ I +A ++
Sbjct: 64 TMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFL-QVRKYSLDLASLILYAYQLST 122
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY--RWMAP 194
A+ L S +HRD+ N+L++ + +KL DFGL+R + A G +WMAP
Sbjct: 123 ALAYLESKRFVHRDIAARNVLVSSN-DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 181
Query: 195 E-----LYSTVT------------LRQGEKKHYNHKNVR-----------PSAENVPEEL 226
E +++ + L G K KN P N P L
Sbjct: 182 ESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTL 241
Query: 227 SIILTSCWKEDPNARPNFTQI 247
++T CW DP+ RP FT++
Sbjct: 242 YSLMTKCWAYDPSRRPRFTEL 262
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 120/261 (45%), Gaps = 39/261 (14%)
Query: 21 IDPKHLFVGPRIGEGAHAKVYEGKY---KNQTVAIKI-VHKGETPEEIAKKESRFAREVA 76
I + + +G IGEG V++G Y +N +A+ I K T + + +K F +E
Sbjct: 12 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREK---FLQEAL 68
Query: 77 MLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+ + H ++VK IG E + I+ EL + G LR +L +R LD+ I +A ++
Sbjct: 69 TMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFL-QVRKYSLDLASLILYAYQLST 127
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY--RWMAP 194
A+ L S +HRD+ N+L++ + +KL DFGL+R + A G +WMAP
Sbjct: 128 ALAYLESKRFVHRDIAARNVLVSSN-DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 186
Query: 195 E-----LYSTVT------------LRQGEKKHYNHKNVR-----------PSAENVPEEL 226
E +++ + L G K KN P N P L
Sbjct: 187 ESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTL 246
Query: 227 SIILTSCWKEDPNARPNFTQI 247
++T CW DP+ RP FT++
Sbjct: 247 YSLMTKCWAYDPSRRPRFTEL 267
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 118/279 (42%), Gaps = 38/279 (13%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-VAIKIVHKGETPEEIAKKESRFAREVAM 77
W I + L + ++G G +V+ Y T VA+K + G E F E +
Sbjct: 183 WEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA------FLAEANV 236
Query: 78 LSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARA 137
+ +QH LVK + + I+TE ++ G+L +L + + I F+ IA
Sbjct: 237 MKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEG 296
Query: 138 MECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY--RWMAPE 195
M + IHRDL+ N+L++ L K+ADFGLAR E E + +W APE
Sbjct: 297 MAFIEQRNYIHRDLRAANILVSASL-VCKIADFGLARVIEDNEYTAREGAKFPIKWTAPE 355
Query: 196 L--YSTVTLRQG---------EKKHY---------NHKNVR--------PSAENVPEELS 227
+ + T++ E Y N + +R P EN PEEL
Sbjct: 356 AINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELY 415
Query: 228 IILTSCWKEDPNARPNFTQIIQMLLNYLSAIAPPEPMIP 266
I+ CWK P RP F I +L ++ +A IP
Sbjct: 416 NIMMRCWKNRPEERPTFEYIQSVLDDFYTATESQXEEIP 454
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 120/261 (45%), Gaps = 39/261 (14%)
Query: 21 IDPKHLFVGPRIGEGAHAKVYEGKY---KNQTVAIKI-VHKGETPEEIAKKESRFAREVA 76
I + + +G IGEG V++G Y +N +A+ I K T + + +K F +E
Sbjct: 9 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREK---FLQEAL 65
Query: 77 MLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+ + H ++VK IG E + I+ EL + G LR +L +R LD+ I +A ++
Sbjct: 66 TMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFL-QVRKYSLDLASLILYAYQLST 124
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY--RWMAP 194
A+ L S +HRD+ N+L++ + +KL DFGL+R + A G +WMAP
Sbjct: 125 ALAYLESKRFVHRDIAARNVLVSSN-DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 183
Query: 195 E-----LYSTVT------------LRQGEKKHYNHKNVR-----------PSAENVPEEL 226
E +++ + L G K KN P N P L
Sbjct: 184 ESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTL 243
Query: 227 SIILTSCWKEDPNARPNFTQI 247
++T CW DP+ RP FT++
Sbjct: 244 YSLMTKCWAYDPSRRPRFTEL 264
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 120/261 (45%), Gaps = 39/261 (14%)
Query: 21 IDPKHLFVGPRIGEGAHAKVYEGKY---KNQTVAIKI-VHKGETPEEIAKKESRFAREVA 76
I + + +G IGEG V++G Y +N +A+ I K T + + +K F +E
Sbjct: 7 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREK---FLQEAL 63
Query: 77 MLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+ + H ++VK IG E + I+ EL + G LR +L +R LD+ I +A ++
Sbjct: 64 TMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFL-QVRKYSLDLASLILYAYQLST 122
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY--RWMAP 194
A+ L S +HRD+ N+L++ + +KL DFGL+R + A G +WMAP
Sbjct: 123 ALAYLESKRFVHRDIAARNVLVSSN-DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 181
Query: 195 E-----LYSTVT------------LRQGEKKHYNHKNVR-----------PSAENVPEEL 226
E +++ + L G K KN P N P L
Sbjct: 182 ESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTL 241
Query: 227 SIILTSCWKEDPNARPNFTQI 247
++T CW DP+ RP FT++
Sbjct: 242 YSLMTKCWAYDPSRRPRFTEL 262
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 120/261 (45%), Gaps = 39/261 (14%)
Query: 21 IDPKHLFVGPRIGEGAHAKVYEGKY---KNQTVAIKI-VHKGETPEEIAKKESRFAREVA 76
I + + +G IGEG V++G Y +N +A+ I K T + + +K F +E
Sbjct: 4 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREK---FLQEAL 60
Query: 77 MLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+ + H ++VK IG E + I+ EL + G LR +L +R LD+ I +A ++
Sbjct: 61 TMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFL-QVRKYSLDLASLILYAYQLST 119
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY--RWMAP 194
A+ L S +HRD+ N+L++ + +KL DFGL+R + A G +WMAP
Sbjct: 120 ALAYLESKRFVHRDIAARNVLVSSN-DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 178
Query: 195 E-----LYSTVT------------LRQGEKKHYNHKNVR-----------PSAENVPEEL 226
E +++ + L G K KN P N P L
Sbjct: 179 ESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTL 238
Query: 227 SIILTSCWKEDPNARPNFTQI 247
++T CW DP+ RP FT++
Sbjct: 239 YSLMTKCWAYDPSRRPRFTEL 259
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 120/261 (45%), Gaps = 39/261 (14%)
Query: 21 IDPKHLFVGPRIGEGAHAKVYEGKY---KNQTVAIKI-VHKGETPEEIAKKESRFAREVA 76
I + + +G IGEG V++G Y +N +A+ I K T + + +K F +E
Sbjct: 10 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREK---FLQEAL 66
Query: 77 MLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+ + H ++VK IG E + I+ EL + G LR +L +R LD+ I +A ++
Sbjct: 67 TMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFL-QVRKYSLDLASLILYAYQLST 125
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY--RWMAP 194
A+ L S +HRD+ N+L++ + +KL DFGL+R + A G +WMAP
Sbjct: 126 ALAYLESKRFVHRDIAARNVLVSSN-DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 184
Query: 195 E-----LYSTVT------------LRQGEKKHYNHKNVR-----------PSAENVPEEL 226
E +++ + L G K KN P N P L
Sbjct: 185 ESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTL 244
Query: 227 SIILTSCWKEDPNARPNFTQI 247
++T CW DP+ RP FT++
Sbjct: 245 YSLMTKCWAYDPSRRPRFTEL 265
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 131/296 (44%), Gaps = 72/296 (24%)
Query: 16 DAKWLIDPKHLFVGPRIGEGAHAKV-------YEGKYKNQTVAIKIVHKGETPEEIAKKE 68
D KW K+L +G +GEG KV +G+ TVA+K++ + +P E+
Sbjct: 15 DPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLL 74
Query: 69 SRFAREVAMLSRVQHRNLVKFIGACKE--PVMVIVTELLSGGTLRKYLLNMRP------- 119
S F +L +V H +++K GAC + P+++IV E G+LR +L R
Sbjct: 75 SEFN----VLKQVNHPHVIKLYGACSQDGPLLLIV-EYAKYGSLRGFLRESRKVGPGYLG 129
Query: 120 ---------------RCLDVCVAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKT 164
R L + I FA I++ M+ L ++HRDL N+L+ E K
Sbjct: 130 SGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRK- 188
Query: 165 IKLADFGLAR---EESLTEMMTAETGTYRWMAPE-------------------LYSTVTL 202
+K++DFGL+R EE + +WMA E L+ VTL
Sbjct: 189 MKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTL 248
Query: 203 RQG------EKKHYN-----HKNVRPSAENVPEELSIILTSCWKEDPNARPNFTQI 247
++ +N H+ RP +N EE+ ++ CWK++P+ RP F I
Sbjct: 249 GGNPYPGIPPERLFNLLKTGHRMERP--DNCSEEMYRLMLQCWKQEPDKRPVFADI 302
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 116/270 (42%), Gaps = 52/270 (19%)
Query: 20 LIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-VAIKIVHKGETPEEIAKKESRFAREVAML 78
+IDP L IG G V+ G + N+ VAIK + +G E+ F E ++
Sbjct: 23 VIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSED------DFIEEAEVM 76
Query: 79 SRVQHRNLVKFIGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARA 137
++ H LV+ G C E + +V E + G L YL R +G LD+
Sbjct: 77 MKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG-LFAAETLLGMCLDVCEG 135
Query: 138 MECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGT---YRWMAP 194
M L +IHRDL N L+ E+ + IK++DFG+ R L + T+ TGT +W +P
Sbjct: 136 MAYLEEACVIHRDLAARNCLVGEN-QVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASP 193
Query: 195 ELYSTV-----------------TLRQGEKKHYNHKNVRPSAENVPEELSI--------- 228
E++S +G+ + N N V E++S
Sbjct: 194 EVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-----SEVVEDISTGFRLYKPRL 248
Query: 229 -------ILTSCWKEDPNARPNFTQIIQML 251
I+ CWKE P RP F+++++ L
Sbjct: 249 ASTHVYQIMNHCWKERPEDRPAFSRLLRQL 278
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 120/261 (45%), Gaps = 39/261 (14%)
Query: 21 IDPKHLFVGPRIGEGAHAKVYEGKY---KNQTVAIKI-VHKGETPEEIAKKESRFAREVA 76
I + + +G IGEG V++G Y +N +A+ I K T + + +K F +E
Sbjct: 7 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREK---FLQEAL 63
Query: 77 MLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+ + H ++VK IG E + I+ EL + G LR +L +R LD+ I +A ++
Sbjct: 64 TMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFL-QVRKFSLDLASLILYAYQLST 122
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY--RWMAP 194
A+ L S +HRD+ N+L++ + +KL DFGL+R + A G +WMAP
Sbjct: 123 ALAYLESKRFVHRDIAARNVLVSSN-DCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAP 181
Query: 195 E-----LYSTVT------------LRQGEKKHYNHKNVR-----------PSAENVPEEL 226
E +++ + L G K KN P N P L
Sbjct: 182 ESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTL 241
Query: 227 SIILTSCWKEDPNARPNFTQI 247
++T CW DP+ RP FT++
Sbjct: 242 YSLMTKCWAYDPSRRPRFTEL 262
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 116/273 (42%), Gaps = 38/273 (13%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-VAIKIVHKGETPEEIAKKESRFAREVAM 77
W I + L + ++G+G +V+ G + T VAIK + G E F +E +
Sbjct: 13 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA------FLQEAQV 66
Query: 78 LSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARA 137
+ +++H LV+ E + IV E +S G L +L + L + + A IA
Sbjct: 67 MKKLRHEKLVQLYAVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 138 MECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY--RWMAPE 195
M + +HRDL+ N+L+ E+L K+ADFGLAR E + + +W APE
Sbjct: 127 MAYVERMNYVHRDLRAANILVGENL-VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 196 --LYSTVTLR---------------QGEKKHYNHKNVR-----------PSAENVPEELS 227
LY T++ +G + N P PE L
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH 245
Query: 228 IILTSCWKEDPNARPNFTQIIQMLLNYLSAIAP 260
++ CW++DP RP F + L +Y ++ P
Sbjct: 246 DLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 278
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 132/297 (44%), Gaps = 74/297 (24%)
Query: 16 DAKWLIDPKHLFVGPRIGEGAHAKV-------YEGKYKNQTVAIKIVHKGETPEEIAKKE 68
D KW K+L +G +GEG KV +G+ TVA+K++ + +P E+
Sbjct: 15 DPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLL 74
Query: 69 SRFAREVAMLSRVQHRNLVKFIGACKE--PVMVIVTELLSGGTLRKYLLNMRP------- 119
S F +L +V H +++K GAC + P+++IV E G+LR +L R
Sbjct: 75 SEFN----VLKQVNHPHVIKLYGACSQDGPLLLIV-EYAKYGSLRGFLRESRKVGPGYLG 129
Query: 120 ---------------RCLDVCVAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKT 164
R L + I FA I++ M+ L ++HRDL N+L+ E K
Sbjct: 130 SGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRK- 188
Query: 165 IKLADFGLAR----EESLTEMMTAETGTYRWMAPE-------------------LYSTVT 201
+K++DFGL+R E+S + +WMA E L+ VT
Sbjct: 189 MKISDFGLSRDVYEEDSYVKRSQGRIPV-KWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
Query: 202 LRQG------EKKHYN-----HKNVRPSAENVPEELSIILTSCWKEDPNARPNFTQI 247
L ++ +N H+ RP +N EE+ ++ CWK++P+ RP F I
Sbjct: 248 LGGNPYPGIPPERLFNLLKTGHRMERP--DNCSEEMYRLMLQCWKQEPDKRPVFADI 302
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 120/261 (45%), Gaps = 39/261 (14%)
Query: 21 IDPKHLFVGPRIGEGAHAKVYEGKY---KNQTVAIKI-VHKGETPEEIAKKESRFAREVA 76
I + + +G IGEG V++G Y +N +A+ I K T + + +K F +E
Sbjct: 387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREK---FLQEAL 443
Query: 77 MLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+ + H ++VK IG E + I+ EL + G LR +L +R LD+ I +A ++
Sbjct: 444 TMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFL-QVRKFSLDLASLILYAYQLST 502
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY--RWMAP 194
A+ L S +HRD+ N+L++ + +KL DFGL+R + A G +WMAP
Sbjct: 503 ALAYLESKRFVHRDIAARNVLVSSN-DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 561
Query: 195 E-----LYSTVT------------LRQGEKKHYNHKNVR-----------PSAENVPEEL 226
E +++ + L G K KN P N P L
Sbjct: 562 ESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTL 621
Query: 227 SIILTSCWKEDPNARPNFTQI 247
++T CW DP+ RP FT++
Sbjct: 622 YSLMTKCWAYDPSRRPRFTEL 642
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 118/273 (43%), Gaps = 38/273 (13%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-VAIKIVHKGETPEEIAKKESRFAREVAM 77
W I + L + ++G+G +V+ G + T VAIK + G E F +E +
Sbjct: 10 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA------FLQEAQV 63
Query: 78 LSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARA 137
+ +++H LV+ E + IVTE ++ G+L +L + L + + + IA
Sbjct: 64 MKKLRHEKLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASG 123
Query: 138 MECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY--RWMAPE 195
M + +HRDL+ N+L+ E+L K+ADFGLAR E + + +W APE
Sbjct: 124 MAYVERMNYVHRDLRAANILVGENL-VCKVADFGLARLIEDNEWTARQGAKFPIKWTAPE 182
Query: 196 --LYSTVTLR---------------QGEKKHYNHKNVR-----------PSAENVPEELS 227
LY T++ +G + N P PE L
Sbjct: 183 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH 242
Query: 228 IILTSCWKEDPNARPNFTQIIQMLLNYLSAIAP 260
++ CW+++P RP F + L +Y ++ P
Sbjct: 243 DLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 275
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 118/273 (43%), Gaps = 38/273 (13%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-VAIKIVHKGETPEEIAKKESRFAREVAM 77
W I + L + ++G+G +V+ G + T VAIK + G E F +E +
Sbjct: 10 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA------FLQEAQV 63
Query: 78 LSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARA 137
+ +++H LV+ E + IVTE ++ G+L +L + L + + + IA
Sbjct: 64 MKKLRHEKLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASG 123
Query: 138 MECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY--RWMAPE 195
M + +HRDL+ N+L+ E+L K+ADFGLAR E + + +W APE
Sbjct: 124 MAYVERMNYVHRDLRAANILVGENL-VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 182
Query: 196 --LYSTVTLR---------------QGEKKHYNHKNVR-----------PSAENVPEELS 227
LY T++ +G + N P PE L
Sbjct: 183 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH 242
Query: 228 IILTSCWKEDPNARPNFTQIIQMLLNYLSAIAP 260
++ CW+++P RP F + L +Y ++ P
Sbjct: 243 DLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 275
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 119/261 (45%), Gaps = 39/261 (14%)
Query: 21 IDPKHLFVGPRIGEGAHAKVYEGKY---KNQTVAIKI-VHKGETPEEIAKKESRFAREVA 76
I + + +G IGEG V++G Y +N +A+ I K T + + +K F +E
Sbjct: 7 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREK---FLQEAL 63
Query: 77 MLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+ + H ++VK IG E + I+ EL + G LR +L +R LD+ I +A ++
Sbjct: 64 TMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFL-QVRKFSLDLASLILYAYQLST 122
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY--RWMAP 194
A+ L S +HRD+ N+L++ +KL DFGL+R + A G +WMAP
Sbjct: 123 ALAYLESKRFVHRDIAARNVLVSAT-DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 181
Query: 195 E-----LYSTVT------------LRQGEKKHYNHKNVR-----------PSAENVPEEL 226
E +++ + L G K KN P N P L
Sbjct: 182 ESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTL 241
Query: 227 SIILTSCWKEDPNARPNFTQI 247
++T CW DP+ RP FT++
Sbjct: 242 YSLMTKCWAYDPSRRPRFTEL 262
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 117/273 (42%), Gaps = 38/273 (13%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-VAIKIVHKGETPEEIAKKESRFAREVAM 77
W I + L + ++G+G +V+ G + T VAIK + G E F +E +
Sbjct: 179 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA------FLQEAQV 232
Query: 78 LSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARA 137
+ +++H LV+ E + IV E +S G+L +L + L + + A IA
Sbjct: 233 MKKLRHEKLVQLYAVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASG 292
Query: 138 MECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY--RWMAPE 195
M + +HRDL+ N+L+ E+L K+ADFGLAR E + + +W APE
Sbjct: 293 MAYVERMNYVHRDLRAANILVGENL-VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 351
Query: 196 --LYSTVTLR---------------QGEKKHYNHKNVR-----------PSAENVPEELS 227
LY T++ +G + N P PE L
Sbjct: 352 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH 411
Query: 228 IILTSCWKEDPNARPNFTQIIQMLLNYLSAIAP 260
++ CW+++P RP F + L +Y ++ P
Sbjct: 412 DLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 444
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 119/261 (45%), Gaps = 39/261 (14%)
Query: 21 IDPKHLFVGPRIGEGAHAKVYEGKY---KNQTVAIKI-VHKGETPEEIAKKESRFAREVA 76
I + + +G IGEG V++G Y +N +A+ I K T + + +K F +E
Sbjct: 387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREK---FLQEAL 443
Query: 77 MLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+ + H ++VK IG E + I+ EL + G LR +L +R LD+ I +A ++
Sbjct: 444 TMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFL-QVRKFSLDLASLILYAYQLST 502
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY--RWMAP 194
A+ L S +HRD+ N+L++ +KL DFGL+R + A G +WMAP
Sbjct: 503 ALAYLESKRFVHRDIAARNVLVSA-TDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 561
Query: 195 E-----LYSTVT------------LRQGEKKHYNHKNVR-----------PSAENVPEEL 226
E +++ + L G K KN P N P L
Sbjct: 562 ESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTL 621
Query: 227 SIILTSCWKEDPNARPNFTQI 247
++T CW DP+ RP FT++
Sbjct: 622 YSLMTKCWAYDPSRRPRFTEL 642
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 114/267 (42%), Gaps = 38/267 (14%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-VAIKIVHKGETPEEIAKKESRFAREVAM 77
W I + L + ++G G +V+ Y T VA+K + G E F E +
Sbjct: 10 WEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA------FLAEANV 63
Query: 78 LSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARA 137
+ +QH LVK + + I+TE ++ G+L +L + + I F+ IA
Sbjct: 64 MKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEG 123
Query: 138 MECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY--RWMAPE 195
M + IHRDL+ N+L++ L K+ADFGLAR E E + +W APE
Sbjct: 124 MAFIEQRNYIHRDLRAANILVSASL-VCKIADFGLARVIEDNEYTAREGAKFPIKWTAPE 182
Query: 196 L--YSTVTLRQG---------EKKHY---------NHKNVR--------PSAENVPEELS 227
+ + T++ E Y N + +R P EN PEEL
Sbjct: 183 AINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELY 242
Query: 228 IILTSCWKEDPNARPNFTQIIQMLLNY 254
I+ CWK P RP F I +L ++
Sbjct: 243 NIMMRCWKNRPEERPTFEYIQSVLDDF 269
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 121/263 (46%), Gaps = 46/263 (17%)
Query: 31 RIGEGAHAKVYEGKY--KNQTVAIK--IVHKGETPEEIAKKESRFAREVAMLSRVQHRNL 86
+IG+G V++G+ VAIK I+ E E+ +K F REV ++S + H N+
Sbjct: 26 QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 87 VKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG- 145
VK G P +V E + G L LL+ + + V + LDIA +E + +
Sbjct: 86 VKLYGLMHNPPR-MVMEFVPCGDLYHRLLD-KAHPIKWSVKLRLMLDIALGIEYMQNQNP 143
Query: 146 -IIHRDLKPENLLLTEDLKT----IKLADFGLAREESLTEMMTAETGTYRWMAPE----- 195
I+HRDL+ N+ L + K+ADFGL+++ ++ G ++WMAPE
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQS--VHSVSGLLGNFQWMAPETIGAE 201
Query: 196 ----------------LYSTVT-------LRQGEKKHYN---HKNVRPS-AENVPEELSI 228
LY+ +T G+ K N + +RP+ E+ P L
Sbjct: 202 EESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRN 261
Query: 229 ILTSCWKEDPNARPNFTQIIQML 251
++ CW DP RP+F+ I++ L
Sbjct: 262 VIELCWSGDPKKRPHFSYIVKEL 284
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 117/270 (43%), Gaps = 46/270 (17%)
Query: 21 IDPKHLFVGPRIGEGAHAKVYEGKYK-----NQTVAIKIVHKGETPEEIAKKESRFAREV 75
+D ++ + +G G +V G+ K +VAIK + G T K+ F E
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT----EKQRRDFLGEA 97
Query: 76 AMLSRVQHRNLVKFIGAC--KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALD 133
+++ + H N+++ G +PVM IVTE + G+L +L + V +G
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVM-IVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRG 155
Query: 134 IARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR--EESLTEMMTAETGTY-- 189
IA M+ L G +HRDL N+L+ +L K++DFGLAR E+ T G
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLARVLEDDPEAAYTTRGGKIPI 214
Query: 190 RWMAPEL--------------YSTV---TLRQGEKKHYNHKNVR-----------PSAEN 221
RW +PE Y V + GE+ ++ N P +
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMD 274
Query: 222 VPEELSIILTSCWKEDPNARPNFTQIIQML 251
P L ++ CW++D N RP F QI+ +L
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 113/268 (42%), Gaps = 44/268 (16%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-VAIKIVHKGETPEEIAKKESRFAREVAM 77
W I + L + ++G G +V+ Y T VA+K + G E F E +
Sbjct: 177 WEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA------FLAEANV 230
Query: 78 LSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARA 137
+ +QH LVK + + I+TE ++ G+L +L + + I F+ IA
Sbjct: 231 MKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEG 290
Query: 138 MECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL- 196
M + IHRDL+ N+L++ L K+ADFGLAR +W APE
Sbjct: 291 MAFIEQRNYIHRDLRAANILVSASL-VCKIADFGLAR--------VGAKFPIKWTAPEAI 341
Query: 197 -YSTVTLRQG---------EKKHY---------NHKNVR--------PSAENVPEELSII 229
+ + T++ E Y N + +R P EN PEEL I
Sbjct: 342 NFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNI 401
Query: 230 LTSCWKEDPNARPNFTQIIQMLLNYLSA 257
+ CWK P RP F I +L ++ +A
Sbjct: 402 MMRCWKNRPEERPTFEYIQSVLDDFYTA 429
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 117/270 (43%), Gaps = 46/270 (17%)
Query: 21 IDPKHLFVGPRIGEGAHAKVYEGKYK-----NQTVAIKIVHKGETPEEIAKKESRFAREV 75
+D ++ + +G G +V G+ K +VAIK + G T K+ F E
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT----EKQRRDFLGEA 97
Query: 76 AMLSRVQHRNLVKFIGAC--KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALD 133
+++ + H N+++ G +PVM IVTE + G+L +L + V +G
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVM-IVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRG 155
Query: 134 IARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR--EESLTEMMTAETGTY-- 189
IA M+ L G +HRDL N+L+ +L K++DFGL+R E+ T G
Sbjct: 156 IASGMKYLSDMGFVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 190 RWMAPEL--------------YSTV---TLRQGEKKHYNHKNVR-----------PSAEN 221
RW +PE Y V + GE+ ++ N P +
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMD 274
Query: 222 VPEELSIILTSCWKEDPNARPNFTQIIQML 251
P L ++ CW++D N RP F QI+ +L
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 113/252 (44%), Gaps = 41/252 (16%)
Query: 32 IGEGAHAKVYEGKYKNQ-----TVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNL 86
+GEG +VYEG Y N VA+K K T + + +F E ++ + H ++
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLD----NKEKFMSEAVIMKNLDHPHI 71
Query: 87 VKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGI 146
VK IG +E I+ EL G L YL L V + ++L I +AM L S
Sbjct: 72 VKLIGIIEEEPTWIIMELYPYGELGHYL-ERNKNSLKVLTLVLYSLQICKAMAYLESINC 130
Query: 147 IHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY--RWMAPE-----LYST 199
+HRD+ N+L+ + +KL DFGL+R + A +WM+PE ++T
Sbjct: 131 VHRDIAVRNILVASP-ECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTT 189
Query: 200 VT------------LRQGEKKHY--NHKNV---------RPSAENVPEELSIILTSCWKE 236
+ L G++ + +K+V P + P L ++T CW
Sbjct: 190 ASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDY 249
Query: 237 DPNARPNFTQII 248
DP+ RP FT+++
Sbjct: 250 DPSDRPRFTELV 261
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 113/252 (44%), Gaps = 41/252 (16%)
Query: 32 IGEGAHAKVYEGKYKNQ-----TVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNL 86
+GEG +VYEG Y N VA+K K T + + +F E ++ + H ++
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLD----NKEKFMSEAVIMKNLDHPHI 87
Query: 87 VKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGI 146
VK IG +E I+ EL G L YL L V + ++L I +AM L S
Sbjct: 88 VKLIGIIEEEPTWIIMELYPYGELGHYL-ERNKNSLKVLTLVLYSLQICKAMAYLESINC 146
Query: 147 IHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY--RWMAPE-----LYST 199
+HRD+ N+L+ + +KL DFGL+R + A +WM+PE ++T
Sbjct: 147 VHRDIAVRNILVASP-ECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTT 205
Query: 200 VT------------LRQGEKKHY--NHKNV---------RPSAENVPEELSIILTSCWKE 236
+ L G++ + +K+V P + P L ++T CW
Sbjct: 206 ASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDY 265
Query: 237 DPNARPNFTQII 248
DP+ RP FT+++
Sbjct: 266 DPSDRPRFTELV 277
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 113/252 (44%), Gaps = 41/252 (16%)
Query: 32 IGEGAHAKVYEGKYKNQ-----TVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNL 86
+GEG +VYEG Y N VA+K K T + + +F E ++ + H ++
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLD----NKEKFMSEAVIMKNLDHPHI 75
Query: 87 VKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGI 146
VK IG +E I+ EL G L YL L V + ++L I +AM L S
Sbjct: 76 VKLIGIIEEEPTWIIMELYPYGELGHYL-ERNKNSLKVLTLVLYSLQICKAMAYLESINC 134
Query: 147 IHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY--RWMAPE-----LYST 199
+HRD+ N+L+ + +KL DFGL+R + A +WM+PE ++T
Sbjct: 135 VHRDIAVRNILVASP-ECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTT 193
Query: 200 VT------------LRQGEKKHY--NHKNV---------RPSAENVPEELSIILTSCWKE 236
+ L G++ + +K+V P + P L ++T CW
Sbjct: 194 ASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDY 253
Query: 237 DPNARPNFTQII 248
DP+ RP FT+++
Sbjct: 254 DPSDRPRFTELV 265
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 115/272 (42%), Gaps = 48/272 (17%)
Query: 21 IDPKHLFVGPRIGEGAHAKVYEGKYK-----NQTVAIKIVHKGETPEEIAKKESRFAREV 75
ID ++ + IG G +V G+ K VAIK + G T ++ F E
Sbjct: 11 IDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYT----ERQRREFLSEA 66
Query: 76 AMLSRVQHRNLVKFIGACKE--PVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALD 133
+++ + +H N+++ G PVM I+TE + G L +L + V +G
Sbjct: 67 SIMGQFEHPNIIRLEGVVTNSMPVM-ILTEFMENGALDSFL-RLNDGQFTVIQLVGMLRG 124
Query: 134 IARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR---EESLTEMMTAETGT-- 188
IA M L +HRDL N+L+ +L K++DFGL+R E S T+ G
Sbjct: 125 IASGMRYLAEMSYVHRDLAARNILVNSNL-VCKVSDFGLSRFLEENSSDPTYTSSLGGKI 183
Query: 189 -YRWMAPEL--------------YSTV---TLRQGEKKHYNHKNVR-----------PSA 219
RW APE Y V + GE+ +++ N P
Sbjct: 184 PIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPPP 243
Query: 220 ENVPEELSIILTSCWKEDPNARPNFTQIIQML 251
+ P L ++ CW++D NARP F Q++ L
Sbjct: 244 PDCPTSLHQLMLDCWQKDRNARPRFPQVVSAL 275
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 117/270 (43%), Gaps = 46/270 (17%)
Query: 21 IDPKHLFVGPRIGEGAHAKVYEGKYK-----NQTVAIKIVHKGETPEEIAKKESRFAREV 75
+D ++ + +G G +V G+ K +VAIK + G T K+ F E
Sbjct: 30 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE----KQRRDFLGEA 85
Query: 76 AMLSRVQHRNLVKFIGAC--KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALD 133
+++ + H N+++ G +PVM IVTE + G+L +L + V +G
Sbjct: 86 SIMGQFDHPNIIRLEGVVTKSKPVM-IVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRG 143
Query: 134 IARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR--EESLTEMMTAETGTY-- 189
IA M+ L G +HRDL N+L+ +L K++DFGL+R E+ T G
Sbjct: 144 IASGMKYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 202
Query: 190 RWMAPEL--------------YSTV---TLRQGEKKHYNHKNVR-----------PSAEN 221
RW +PE Y V + GE+ ++ N P +
Sbjct: 203 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMD 262
Query: 222 VPEELSIILTSCWKEDPNARPNFTQIIQML 251
P L ++ CW++D N RP F QI+ +L
Sbjct: 263 CPAALYQLMLDCWQKDRNNRPKFEQIVSIL 292
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 117/270 (43%), Gaps = 46/270 (17%)
Query: 21 IDPKHLFVGPRIGEGAHAKVYEGKYK-----NQTVAIKIVHKGETPEEIAKKESRFAREV 75
+D ++ + +G G +V G+ K +VAIK + G T K+ F E
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT----EKQRRDFLGEA 97
Query: 76 AMLSRVQHRNLVKFIGAC--KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALD 133
+++ + H N+++ G +PVM IVTE + G+L +L + V +G
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVM-IVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRG 155
Query: 134 IARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR--EESLTEMMTAETGTY-- 189
IA M+ L G +HRDL N+L+ +L K++DFGL+R E+ T G
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 190 RWMAPEL--------------YSTV---TLRQGEKKHYNHKNVR-----------PSAEN 221
RW +PE Y V + GE+ ++ N P +
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMD 274
Query: 222 VPEELSIILTSCWKEDPNARPNFTQIIQML 251
P L ++ CW++D N RP F QI+ +L
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 117/270 (43%), Gaps = 46/270 (17%)
Query: 21 IDPKHLFVGPRIGEGAHAKVYEGKYK-----NQTVAIKIVHKGETPEEIAKKESRFAREV 75
+D ++ + +G G +V G+ K +VAIK + G T K+ F E
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT----EKQRRDFLGEA 97
Query: 76 AMLSRVQHRNLVKFIGAC--KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALD 133
+++ + H N+++ G +PVM IVTE + G+L +L + V +G
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVM-IVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRG 155
Query: 134 IARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR--EESLTEMMTAETGTY-- 189
IA M+ L G +HRDL N+L+ +L K++DFGL+R E+ T G
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 190 RWMAPEL--------------YSTV---TLRQGEKKHYNHKNVR-----------PSAEN 221
RW +PE Y V + GE+ ++ N P +
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMD 274
Query: 222 VPEELSIILTSCWKEDPNARPNFTQIIQML 251
P L ++ CW++D N RP F QI+ +L
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 117/270 (43%), Gaps = 46/270 (17%)
Query: 21 IDPKHLFVGPRIGEGAHAKVYEGKYK-----NQTVAIKIVHKGETPEEIAKKESRFAREV 75
+D ++ + +G G +V G+ K +VAIK + G T K+ F E
Sbjct: 40 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT----EKQRRDFLGEA 95
Query: 76 AMLSRVQHRNLVKFIGAC--KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALD 133
+++ + H N+++ G +PVM IVTE + G+L +L + V +G
Sbjct: 96 SIMGQFDHPNIIRLEGVVTKSKPVM-IVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRG 153
Query: 134 IARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR--EESLTEMMTAETGTY-- 189
IA M+ L G +HRDL N+L+ +L K++DFGL+R E+ T G
Sbjct: 154 IASGMKYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 212
Query: 190 RWMAPEL--------------YSTV---TLRQGEKKHYNHKNVR-----------PSAEN 221
RW +PE Y V + GE+ ++ N P +
Sbjct: 213 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMD 272
Query: 222 VPEELSIILTSCWKEDPNARPNFTQIIQML 251
P L ++ CW++D N RP F QI+ +L
Sbjct: 273 CPAALYQLMLDCWQKDRNNRPKFEQIVSIL 302
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 117/270 (43%), Gaps = 46/270 (17%)
Query: 21 IDPKHLFVGPRIGEGAHAKVYEGKYK-----NQTVAIKIVHKGETPEEIAKKESRFAREV 75
+D ++ + +G G +V G+ K +VAIK + G T K+ F E
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT----EKQRRDFLGEA 97
Query: 76 AMLSRVQHRNLVKFIGAC--KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALD 133
+++ + H N+++ G +PVM IVTE + G+L +L + V +G
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVM-IVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRG 155
Query: 134 IARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR--EESLTEMMTAETGTY-- 189
IA M+ L G +HRDL N+L+ +L K++DFGL+R E+ T G
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 190 RWMAPEL--------------YSTV---TLRQGEKKHYNHKNVR-----------PSAEN 221
RW +PE Y V + GE+ ++ N P +
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMD 274
Query: 222 VPEELSIILTSCWKEDPNARPNFTQIIQML 251
P L ++ CW++D N RP F QI+ +L
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 117/270 (43%), Gaps = 46/270 (17%)
Query: 21 IDPKHLFVGPRIGEGAHAKVYEGKYK-----NQTVAIKIVHKGETPEEIAKKESRFAREV 75
+D ++ + +G G +V G+ K +VAIK + G T K+ F E
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT----EKQRRDFLGEA 97
Query: 76 AMLSRVQHRNLVKFIGAC--KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALD 133
+++ + H N+++ G +PVM IVTE + G+L +L + V +G
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVM-IVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRG 155
Query: 134 IARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR--EESLTEMMTAETGTY-- 189
IA M+ L G +HRDL N+L+ +L K++DFGL+R E+ T G
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 190 RWMAPEL--------------YSTV---TLRQGEKKHYNHKNVR-----------PSAEN 221
RW +PE Y V + GE+ ++ N P +
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMD 274
Query: 222 VPEELSIILTSCWKEDPNARPNFTQIIQML 251
P L ++ CW++D N RP F QI+ +L
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 117/270 (43%), Gaps = 46/270 (17%)
Query: 21 IDPKHLFVGPRIGEGAHAKVYEGKYK-----NQTVAIKIVHKGETPEEIAKKESRFAREV 75
+D ++ + +G G +V G+ K +VAIK + G T K+ F E
Sbjct: 13 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE----KQRRDFLGEA 68
Query: 76 AMLSRVQHRNLVKFIGAC--KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALD 133
+++ + H N+++ G +PVM IVTE + G+L +L + V +G
Sbjct: 69 SIMGQFDHPNIIRLEGVVTKSKPVM-IVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRG 126
Query: 134 IARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR--EESLTEMMTAETGTY-- 189
IA M+ L G +HRDL N+L+ +L K++DFGL+R E+ T G
Sbjct: 127 IASGMKYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 185
Query: 190 RWMAPEL--------------YSTV---TLRQGEKKHYNHKNVR-----------PSAEN 221
RW +PE Y V + GE+ ++ N P +
Sbjct: 186 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMD 245
Query: 222 VPEELSIILTSCWKEDPNARPNFTQIIQML 251
P L ++ CW++D N RP F QI+ +L
Sbjct: 246 CPAALYQLMLDCWQKDRNNRPKFEQIVSIL 275
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 117/270 (43%), Gaps = 46/270 (17%)
Query: 21 IDPKHLFVGPRIGEGAHAKVYEGKYK-----NQTVAIKIVHKGETPEEIAKKESRFAREV 75
+D ++ + +G G +V G+ K +VAIK + G T K+ F E
Sbjct: 13 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE----KQRRDFLGEA 68
Query: 76 AMLSRVQHRNLVKFIGAC--KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALD 133
+++ + H N+++ G +PVM IVTE + G+L +L + V +G
Sbjct: 69 SIMGQFDHPNIIRLEGVVTKSKPVM-IVTEXMENGSLDSFLRKHDAQ-FTVIQLVGMLRG 126
Query: 134 IARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR--EESLTEMMTAETGTY-- 189
IA M+ L G +HRDL N+L+ +L K++DFGL+R E+ T G
Sbjct: 127 IASGMKYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 185
Query: 190 RWMAPEL--------------YSTV---TLRQGEKKHYNHKNVR-----------PSAEN 221
RW +PE Y V + GE+ ++ N P +
Sbjct: 186 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMD 245
Query: 222 VPEELSIILTSCWKEDPNARPNFTQIIQML 251
P L ++ CW++D N RP F QI+ +L
Sbjct: 246 CPAALYQLMLDCWQKDRNNRPKFEQIVSIL 275
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 117/270 (43%), Gaps = 46/270 (17%)
Query: 21 IDPKHLFVGPRIGEGAHAKVYEGKYK-----NQTVAIKIVHKGETPEEIAKKESRFAREV 75
+D ++ + +G G +V G+ K +VAIK + G T K+ F E
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT----EKQRRDFLGEA 97
Query: 76 AMLSRVQHRNLVKFIGAC--KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALD 133
+++ + H N+++ G +PVM IVTE + G+L +L + V +G
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVM-IVTEXMENGSLDSFLRKHDAQ-FTVIQLVGMLRG 155
Query: 134 IARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR--EESLTEMMTAETGTY-- 189
IA M+ L G +HRDL N+L+ +L K++DFGL+R E+ T G
Sbjct: 156 IASGMKYLSDMGAVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 190 RWMAPEL--------------YSTV---TLRQGEKKHYNHKNVR-----------PSAEN 221
RW +PE Y V + GE+ ++ N P +
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMD 274
Query: 222 VPEELSIILTSCWKEDPNARPNFTQIIQML 251
P L ++ CW++D N RP F QI+ +L
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 117/270 (43%), Gaps = 46/270 (17%)
Query: 21 IDPKHLFVGPRIGEGAHAKVYEGKYK-----NQTVAIKIVHKGETPEEIAKKESRFAREV 75
+D ++ + +G G +V G+ K +VAIK + G T K+ F E
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT----EKQRRDFLGEA 97
Query: 76 AMLSRVQHRNLVKFIGAC--KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALD 133
+++ + H N+++ G +PVM IVTE + G+L +L + V +G
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVM-IVTEXMENGSLDSFLRKHDAQ-FTVIQLVGMLRG 155
Query: 134 IARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR--EESLTEMMTAETGTY-- 189
IA M+ L G +HRDL N+L+ +L K++DFGL+R E+ T G
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 190 RWMAPEL--------------YSTV---TLRQGEKKHYNHKNVR-----------PSAEN 221
RW +PE Y V + GE+ ++ N P +
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMD 274
Query: 222 VPEELSIILTSCWKEDPNARPNFTQIIQML 251
P L ++ CW++D N RP F QI+ +L
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 132/297 (44%), Gaps = 68/297 (22%)
Query: 7 FYLADELKLDAKWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-------VAIKIVHKGE 59
++ A ++ + +W + + + + +G+G+ VYEG K VAIK V++
Sbjct: 8 YFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA 67
Query: 60 TPEEIAKKESRFAREVAMLSRVQHRNLVKFIGACKE--PVMVIVTELLSGGTLRKYLLNM 117
+ ++ F E +++ ++V+ +G + P +VI+ EL++ G L+ YL ++
Sbjct: 68 S----MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIM-ELMTRGDLKSYLRSL 122
Query: 118 RPRCLDVCV--------AIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLAD 169
RP + V I A +IA M L+++ +HRDL N ++ ED T+K+ D
Sbjct: 123 RPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDF-TVKIGD 181
Query: 170 FGLAREESLTEMMTAETGTY----------RWMAPE-------------------LYSTV 200
FG+ R+ ET Y RWM+PE L+
Sbjct: 182 FGMTRD-------IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 234
Query: 201 TLRQGEKKHYNHKNV---------RPSAENVPEELSIILTSCWKEDPNARPNFTQII 248
TL + + +++ V +N P+ L ++ CW+ +P RP+F +II
Sbjct: 235 TLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 291
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 116/270 (42%), Gaps = 46/270 (17%)
Query: 21 IDPKHLFVGPRIGEGAHAKVYEGKYK-----NQTVAIKIVHKGETPEEIAKKESRFAREV 75
+D ++ + +G G +V G+ K +VAIK + G T K+ F E
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT----EKQRRDFLGEA 97
Query: 76 AMLSRVQHRNLVKFIGAC--KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALD 133
+++ + H N+++ G +PVM IVTE + G+L +L + V +G
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVM-IVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRG 155
Query: 134 IARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR--EESLTEMMTAETGTY-- 189
IA M+ L G +HRDL N+L+ +L K++DFGL R E+ T G
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLGRVLEDDPEAAYTTRGGKIPI 214
Query: 190 RWMAPEL--------------YSTV---TLRQGEKKHYNHKNVR-----------PSAEN 221
RW +PE Y V + GE+ ++ N P +
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMD 274
Query: 222 VPEELSIILTSCWKEDPNARPNFTQIIQML 251
P L ++ CW++D N RP F QI+ +L
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 122/298 (40%), Gaps = 64/298 (21%)
Query: 12 ELKLDAKWLIDPKHLFVGPRIGEGAHAKVYE----GKYKNQ---TVAIKIVHKGETPEEI 64
+L D KW L G +G GA KV E G K+ TVA+K++ P
Sbjct: 11 QLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK----PSAH 66
Query: 65 AKKESRFAREVAMLSRV-QHRNLVKFIGACK--EPVMVIVTELLSGGTLRKYLLNMRPR- 120
+ E+ +LS + H N+V +GAC P +VI TE G L +L R
Sbjct: 67 LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVI-TEYCCYGDLLNFLRRKRDSF 125
Query: 121 -CLDVCVAI--------------GFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTI 165
C AI F+ +A+ M L S IHRDL N+LLT +
Sbjct: 126 ICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHG-RIT 184
Query: 166 KLADFGLAREESLTEMMTAETGT---YRWMAPE-LYSTVTLRQGEKKHYN---------- 211
K+ DFGLAR+ + +WMAPE +++ V + + Y
Sbjct: 185 KICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLG 244
Query: 212 -------------HKNVRP-----SAENVPEELSIILTSCWKEDPNARPNFTQIIQML 251
+K ++ S E+ P E+ I+ +CW DP RP F QI+Q++
Sbjct: 245 SSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 302
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 135/306 (44%), Gaps = 64/306 (20%)
Query: 5 SRFYLADELKLDAKWLIDPKHLFVGPRIGEGAHAKVYEGKYKN-------QTVAIKIVHK 57
S Y+ DE W + + + + +G+G+ VYEG ++ VA+K V++
Sbjct: 4 SSVYVPDE------WEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE 57
Query: 58 GETPEEIAKKESRFAREVAMLSRVQHRNLVKFIGACK--EPVMVIVTELLSGGTLRKYLL 115
+ ++ F E +++ ++V+ +G +P +V++ EL++ G L+ YL
Sbjct: 58 SAS----LRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVM-ELMAHGDLKSYLR 112
Query: 116 NMRPRCLD--------VCVAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKL 167
++RP + + I A +IA M L++ +HRDL N ++ D T+K+
Sbjct: 113 SLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDF-TVKI 171
Query: 168 ADFGLAREESLTEMMTAETGT-----YRWMAPE-------------------LYSTVTLR 203
DFG+ R+ + E G RWMAPE L+ +L
Sbjct: 172 GDFGMTRD--IXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLA 229
Query: 204 QGEKKHYNHKNV---------RPSAENVPEELSIILTSCWKEDPNARPNFTQIIQMLLNY 254
+ + +++ V +N PE ++ ++ CW+ +PN RP F +I+ +L +
Sbjct: 230 EQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDD 289
Query: 255 LSAIAP 260
L P
Sbjct: 290 LHPSFP 295
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 132/297 (44%), Gaps = 68/297 (22%)
Query: 7 FYLADELKLDAKWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-------VAIKIVHKGE 59
++ A ++ + +W + + + + +G+G+ VYEG K VAIK V++
Sbjct: 8 YFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA 67
Query: 60 TPEEIAKKESRFAREVAMLSRVQHRNLVKFIGACKE--PVMVIVTELLSGGTLRKYLLNM 117
+ ++ F E +++ ++V+ +G + P +VI+ EL++ G L+ YL ++
Sbjct: 68 S----MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIM-ELMTRGDLKSYLRSL 122
Query: 118 RPRCLDVCV--------AIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLAD 169
RP + V I A +IA M L+++ +HRDL N ++ ED T+K+ D
Sbjct: 123 RPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDF-TVKIGD 181
Query: 170 FGLAREESLTEMMTAETGTY----------RWMAPE-------------------LYSTV 200
FG+ R+ ET Y RWM+PE L+
Sbjct: 182 FGMTRD-------IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 234
Query: 201 TLRQGEKKHYNHKNV---------RPSAENVPEELSIILTSCWKEDPNARPNFTQII 248
TL + + +++ V +N P+ L ++ CW+ +P RP+F +II
Sbjct: 235 TLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 291
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 122/298 (40%), Gaps = 64/298 (21%)
Query: 12 ELKLDAKWLIDPKHLFVGPRIGEGAHAKVYE----GKYKNQ---TVAIKIVHKGETPEEI 64
+L D KW L G +G GA KV E G K+ TVA+K++ P
Sbjct: 34 QLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK----PSAH 89
Query: 65 AKKESRFAREVAMLSRV-QHRNLVKFIGACK--EPVMVIVTELLSGGTLRKYLLNMRPR- 120
+ E+ +LS + H N+V +GAC P +VI TE G L +L R
Sbjct: 90 LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVI-TEYCCYGDLLNFLRRKRDSF 148
Query: 121 -CLDVCVAI--------------GFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTI 165
C AI F+ +A+ M L S IHRDL N+LLT +
Sbjct: 149 ICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHG-RIT 207
Query: 166 KLADFGLAREESLTEMMTAETGT---YRWMAPE-LYSTVTLRQGEKKHYN---------- 211
K+ DFGLAR+ + +WMAPE +++ V + + Y
Sbjct: 208 KICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLG 267
Query: 212 -------------HKNVRP-----SAENVPEELSIILTSCWKEDPNARPNFTQIIQML 251
+K ++ S E+ P E+ I+ +CW DP RP F QI+Q++
Sbjct: 268 SSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 325
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 115/272 (42%), Gaps = 48/272 (17%)
Query: 21 IDPKHLFVGPRIGEGAHAKVYEGKYK-----NQTVAIKIVHKGETPEEIAKKESRFAREV 75
ID ++ + IG G +V G+ K VAIK + G T ++ F E
Sbjct: 13 IDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYT----ERQRREFLSEA 68
Query: 76 AMLSRVQHRNLVKFIGACKE--PVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALD 133
+++ + +H N+++ G PVM I+TE + G L +L + V +G
Sbjct: 69 SIMGQFEHPNIIRLEGVVTNSMPVM-ILTEFMENGALDSFL-RLNDGQFTVIQLVGMLRG 126
Query: 134 IARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR---EESLTEMMTAETGT-- 188
IA M L +HRDL N+L+ +L K++DFGL+R E S T+ G
Sbjct: 127 IASGMRYLAEMSYVHRDLAARNILVNSNL-VCKVSDFGLSRFLEENSSDPTETSSLGGKI 185
Query: 189 -YRWMAPEL--------------YSTV---TLRQGEKKHYNHKNVR-----------PSA 219
RW APE Y V + GE+ +++ N P
Sbjct: 186 PIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPPP 245
Query: 220 ENVPEELSIILTSCWKEDPNARPNFTQIIQML 251
+ P L ++ CW++D NARP F Q++ L
Sbjct: 246 PDCPTSLHQLMLDCWQKDRNARPRFPQVVSAL 277
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 122/298 (40%), Gaps = 64/298 (21%)
Query: 12 ELKLDAKWLIDPKHLFVGPRIGEGAHAKVYE----GKYKNQ---TVAIKIVHKGETPEEI 64
+L D KW L G +G GA KV E G K+ TVA+K++ P
Sbjct: 29 QLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK----PSAH 84
Query: 65 AKKESRFAREVAMLSRV-QHRNLVKFIGACK--EPVMVIVTELLSGGTLRKYLLNMRPR- 120
+ E+ +LS + H N+V +GAC P +VI TE G L +L R
Sbjct: 85 LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVI-TEYCCYGDLLNFLRRKRDSF 143
Query: 121 -CLDVCVAI--------------GFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTI 165
C AI F+ +A+ M L S IHRDL N+LLT +
Sbjct: 144 ICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHG-RIT 202
Query: 166 KLADFGLAREESLTEMMTAETGT---YRWMAPE-LYSTVTLRQGEKKHYN---------- 211
K+ DFGLAR+ + +WMAPE +++ V + + Y
Sbjct: 203 KICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLG 262
Query: 212 -------------HKNVRP-----SAENVPEELSIILTSCWKEDPNARPNFTQIIQML 251
+K ++ S E+ P E+ I+ +CW DP RP F QI+Q++
Sbjct: 263 SSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 320
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 122/298 (40%), Gaps = 64/298 (21%)
Query: 12 ELKLDAKWLIDPKHLFVGPRIGEGAHAKVYE----GKYKNQ---TVAIKIVHKGETPEEI 64
+L D KW L G +G GA KV E G K+ TVA+K++ P
Sbjct: 27 QLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK----PSAH 82
Query: 65 AKKESRFAREVAMLSRV-QHRNLVKFIGACK--EPVMVIVTELLSGGTLRKYLLNMRPR- 120
+ E+ +LS + H N+V +GAC P +VI TE G L +L R
Sbjct: 83 LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVI-TEYCCYGDLLNFLRRKRDSF 141
Query: 121 -CLDVCVAI--------------GFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTI 165
C AI F+ +A+ M L S IHRDL N+LLT +
Sbjct: 142 ICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHG-RIT 200
Query: 166 KLADFGLAREESLTEMMTAETGT---YRWMAPE-LYSTVTLRQGEKKHYN---------- 211
K+ DFGLAR+ + +WMAPE +++ V + + Y
Sbjct: 201 KICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLG 260
Query: 212 -------------HKNVRP-----SAENVPEELSIILTSCWKEDPNARPNFTQIIQML 251
+K ++ S E+ P E+ I+ +CW DP RP F QI+Q++
Sbjct: 261 SSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 318
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 129/309 (41%), Gaps = 66/309 (21%)
Query: 10 ADELKLDA-KWLIDPKHLFVGPRIGEGAHAKVYEGKYKN-------QTVAIKIVHKGETP 61
A+ L DA KW L +G +G GA +V E +TVA+K++ +G T
Sbjct: 3 AERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH 62
Query: 62 EEIAKKESRFAREVAMLSRVQHR-NLVKFIGACKEPV--MVIVTELLSGGTLRKYLLNMR 118
E E+ +L + H N+V +GAC +P ++++TE G L YL + R
Sbjct: 63 SE----HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKR 118
Query: 119 PRCLDVCVA--------------IGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKT 164
+ VA I ++ +A+ ME L S IHRDL N+LL+E
Sbjct: 119 NEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK-NV 177
Query: 165 IKLADFGLAREESLTEMMTAETGTYR----WMAPE-LYSTVTLRQGE------------- 206
+K+ DFGLAR + + G R WMAPE ++ V Q +
Sbjct: 178 VKICDFGLAR-DIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
Query: 207 ----------------KKHYNHKNVRPSAENVPEELSIILTSCWKEDPNARPNFTQIIQM 250
++ +R PE +L CW +P+ RP F+++++
Sbjct: 237 LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTML-DCWHGEPSQRPTFSELVEH 295
Query: 251 LLNYLSAIA 259
L N L A A
Sbjct: 296 LGNLLQANA 304
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 129/309 (41%), Gaps = 66/309 (21%)
Query: 10 ADELKLDA-KWLIDPKHLFVGPRIGEGAHAKVYEGKYKN-------QTVAIKIVHKGETP 61
A+ L DA KW L +G +G GA +V E +TVA+K++ +G T
Sbjct: 3 AERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH 62
Query: 62 EEIAKKESRFAREVAMLSRVQHR-NLVKFIGACKEPV--MVIVTELLSGGTLRKYLLNMR 118
E E+ +L + H N+V +GAC +P ++++TE G L YL + R
Sbjct: 63 SE----HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKR 118
Query: 119 PRCLDVCVA--------------IGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKT 164
+ VA I ++ +A+ ME L S IHRDL N+LL+E
Sbjct: 119 NEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK-NV 177
Query: 165 IKLADFGLAREESLTEMMTAETGTYR----WMAPE-LYSTVTLRQGE------------- 206
+K+ DFGLAR + + G R WMAPE ++ V Q +
Sbjct: 178 VKICDFGLAR-DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
Query: 207 ----------------KKHYNHKNVRPSAENVPEELSIILTSCWKEDPNARPNFTQIIQM 250
++ +R PE +L CW +P+ RP F+++++
Sbjct: 237 LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTML-DCWHGEPSQRPTFSELVEH 295
Query: 251 LLNYLSAIA 259
L N L A A
Sbjct: 296 LGNLLQANA 304
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 132/303 (43%), Gaps = 74/303 (24%)
Query: 1 MESRSRFYLADELKLDAKWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-------VAIK 53
M S + Y+ DE W + + + + +G+G+ VYEG K VAIK
Sbjct: 1 MVSAADVYVPDE------WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIK 54
Query: 54 IVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKFIGACKE--PVMVIVTELLSGGTLR 111
V++ + ++ F E +++ ++V+ +G + P +VI+ EL++ G L+
Sbjct: 55 TVNEAAS----MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIM-ELMTRGDLK 109
Query: 112 KYLLNMRPRCLDVCV--------AIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLK 163
YL ++RP + V I A +IA M L+++ +HRDL N ++ ED
Sbjct: 110 SYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDF- 168
Query: 164 TIKLADFGLAREESLTEMMTAETGTY----------RWMAPE------------------ 195
T+K+ DFG+ R+ ET Y RWM+PE
Sbjct: 169 TVKIGDFGMTRD-------IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGV 221
Query: 196 -LYSTVTLRQGEKKHYNHKNV---------RPSAENVPEELSIILTSCWKEDPNARPNFT 245
L+ TL + + +++ V +N P+ L ++ CW+ +P RP+F
Sbjct: 222 VLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFL 281
Query: 246 QII 248
+II
Sbjct: 282 EII 284
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 120/263 (45%), Gaps = 46/263 (17%)
Query: 31 RIGEGAHAKVYEGKY--KNQTVAIK--IVHKGETPEEIAKKESRFAREVAMLSRVQHRNL 86
+IG+G V++G+ VAIK I+ E E+ +K F REV ++S + H N+
Sbjct: 26 QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 87 VKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG- 145
VK G P +V E + G L LL+ + + V + LDIA +E + +
Sbjct: 86 VKLYGLMHNPPR-MVMEFVPCGDLYHRLLD-KAHPIKWSVKLRLMLDIALGIEYMQNQNP 143
Query: 146 -IIHRDLKPENLLLTEDLKT----IKLADFGLAREESLTEMMTAETGTYRWMAPE----- 195
I+HRDL+ N+ L + K+ADFG +++ ++ G ++WMAPE
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQS--VHSVSGLLGNFQWMAPETIGAE 201
Query: 196 ----------------LYSTVT-------LRQGEKKHYN---HKNVRPS-AENVPEELSI 228
LY+ +T G+ K N + +RP+ E+ P L
Sbjct: 202 EESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRN 261
Query: 229 ILTSCWKEDPNARPNFTQIIQML 251
++ CW DP RP+F+ I++ L
Sbjct: 262 VIELCWSGDPKKRPHFSYIVKEL 284
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 132/303 (43%), Gaps = 74/303 (24%)
Query: 1 MESRSRFYLADELKLDAKWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-------VAIK 53
M S + Y+ DE W + + + + +G+G+ VYEG K VAIK
Sbjct: 1 MVSAADVYVPDE------WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIK 54
Query: 54 IVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKFIGACKE--PVMVIVTELLSGGTLR 111
V++ + ++ F E +++ ++V+ +G + P +VI+ EL++ G L+
Sbjct: 55 TVNEAAS----MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIM-ELMTRGDLK 109
Query: 112 KYLLNMRPRCLDVCV--------AIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLK 163
YL ++RP + V I A +IA M L+++ +HRDL N ++ ED
Sbjct: 110 SYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDF- 168
Query: 164 TIKLADFGLAREESLTEMMTAETGTY----------RWMAPE------------------ 195
T+K+ DFG+ R+ ET Y RWM+PE
Sbjct: 169 TVKIGDFGMTRD-------IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGV 221
Query: 196 -LYSTVTLRQGEKKHYNHKNV---------RPSAENVPEELSIILTSCWKEDPNARPNFT 245
L+ TL + + +++ V +N P+ L ++ CW+ +P RP+F
Sbjct: 222 VLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFL 281
Query: 246 QII 248
+II
Sbjct: 282 EII 284
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 132/297 (44%), Gaps = 68/297 (22%)
Query: 7 FYLADELKLDAKWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-------VAIKIVHKGE 59
++ A ++ + +W + + + + +G+G+ VYEG K VAIK V++
Sbjct: 30 YFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA 89
Query: 60 TPEEIAKKESRFAREVAMLSRVQHRNLVKFIGACKE--PVMVIVTELLSGGTLRKYLLNM 117
+ ++ F E +++ ++V+ +G + P +VI+ EL++ G L+ YL ++
Sbjct: 90 S----MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIM-ELMTRGDLKSYLRSL 144
Query: 118 RPRCLDVCV--------AIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLAD 169
RP + V I A +IA M L+++ +HRDL N ++ ED T+K+ D
Sbjct: 145 RPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDF-TVKIGD 203
Query: 170 FGLAREESLTEMMTAETGTY----------RWMAPE-------------------LYSTV 200
FG+ R+ ET Y RWM+PE L+
Sbjct: 204 FGMTRD-------IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 256
Query: 201 TLRQGEKKHYNHKNV---------RPSAENVPEELSIILTSCWKEDPNARPNFTQII 248
TL + + +++ V +N P+ L ++ CW+ +P RP+F +II
Sbjct: 257 TLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 313
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 120/263 (45%), Gaps = 46/263 (17%)
Query: 31 RIGEGAHAKVYEGKY--KNQTVAIK--IVHKGETPEEIAKKESRFAREVAMLSRVQHRNL 86
+IG+G V++G+ VAIK I+ E E+ +K F REV ++S + H N+
Sbjct: 26 QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 87 VKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG- 145
VK G P +V E + G L LL+ + + V + LDIA +E + +
Sbjct: 86 VKLYGLMHNPPR-MVMEFVPCGDLYHRLLD-KAHPIKWSVKLRLMLDIALGIEYMQNQNP 143
Query: 146 -IIHRDLKPENLLLTEDLKT----IKLADFGLAREESLTEMMTAETGTYRWMAPE----- 195
I+HRDL+ N+ L + K+ADF L+++ ++ G ++WMAPE
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQS--VHSVSGLLGNFQWMAPETIGAE 201
Query: 196 ----------------LYSTVT-------LRQGEKKHYN---HKNVRPS-AENVPEELSI 228
LY+ +T G+ K N + +RP+ E+ P L
Sbjct: 202 EESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRN 261
Query: 229 ILTSCWKEDPNARPNFTQIIQML 251
++ CW DP RP+F+ I++ L
Sbjct: 262 VIELCWSGDPKKRPHFSYIVKEL 284
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 121/298 (40%), Gaps = 64/298 (21%)
Query: 12 ELKLDAKWLIDPKHLFVGPRIGEGAHAKVYE----GKYKNQ---TVAIKIVHKGETPEEI 64
+L D KW L G +G GA KV E G K+ TVA+K++ P
Sbjct: 34 QLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKML----KPSAH 89
Query: 65 AKKESRFAREVAMLSRV-QHRNLVKFIGACK--EPVMVIVTELLSGGTLRKYLLNMRPR- 120
+ E+ +LS + H N+V +GAC P +VI TE G L +L R
Sbjct: 90 LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVI-TEYCCYGDLLNFLRRKRDSF 148
Query: 121 -CLDVCVAI--------------GFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTI 165
C AI F+ +A+ M L S IHRDL N+LLT +
Sbjct: 149 ICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHG-RIT 207
Query: 166 KLADFGLAREESLTEMMTAETGT---YRWMAPE-LYSTVTLRQGEKKHYN---------- 211
K+ DFGLAR + +WMAPE +++ V + + Y
Sbjct: 208 KICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLG 267
Query: 212 -------------HKNVRP-----SAENVPEELSIILTSCWKEDPNARPNFTQIIQML 251
+K ++ S E+ P E+ I+ +CW DP RP F QI+Q++
Sbjct: 268 SSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 325
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 131/296 (44%), Gaps = 64/296 (21%)
Query: 3 SRSRFYLADELKLDAKWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-------VAIKIV 55
S + Y+ DE W + + + + +G+G+ VYEG K VAIK V
Sbjct: 4 SAADVYVPDE------WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV 57
Query: 56 HKGETPEEIAKKESRFAREVAMLSRVQHRNLVKFIGACKE--PVMVIVTELLSGGTLRKY 113
++ + ++ F E +++ ++V+ +G + P +VI+ EL++ G L+ Y
Sbjct: 58 NEAAS----MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIM-ELMTRGDLKSY 112
Query: 114 LLNMRPRCLDVCV--------AIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTI 165
L ++RP + V I A +IA M L+++ +HRDL N ++ ED T+
Sbjct: 113 LRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDF-TV 171
Query: 166 KLADFGLAREESLTEMMTAETGT-----YRWMAPE-------------------LYSTVT 201
K+ DFG+ R+ + E G RWM+PE L+ T
Sbjct: 172 KIGDFGMTRD--IXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
Query: 202 LRQGEKKHYNHKNV---------RPSAENVPEELSIILTSCWKEDPNARPNFTQII 248
L + + +++ V +N P+ L ++ CW+ +P RP+F +II
Sbjct: 230 LAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 285
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 125/291 (42%), Gaps = 48/291 (16%)
Query: 32 IGEGAHAKVYEGKYKNQT------VAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
IG G +VY+G K + VAIK + G T K+ F E ++ + H N
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYT----EKQRVDFLGEAGIMGQFSHHN 107
Query: 86 LVKFIGA-CKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
+++ G K M+I+TE + G L K+L + V +G IA M+ L +
Sbjct: 108 IIRLEGVISKYKPMMIITEYMENGALDKFLRE-KDGEFSVLQLVGMLRGIAAGMKYLANM 166
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLAR--EESLTEMMTAETGTY--RWMAPELYSTV 200
+HRDL N+L+ +L K++DFGL+R E+ T G RW APE S
Sbjct: 167 NYVHRDLAARNILVNSNL-VCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYR 225
Query: 201 -----------------TLRQGEKKHY---NHKNVR--------PSAENVPEELSIILTS 232
+ GE+ ++ NH+ ++ P+ + P + ++
Sbjct: 226 KFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQ 285
Query: 233 CWKEDPNARPNFTQIIQMLLNYLSAIAPPEPMIPHRIFNSENTILPPESPG 283
CW+++ RP F I+ +L + A P+ + F+ +I P + G
Sbjct: 286 CWQQERARRPKFADIVSILDKLIRA---PDSLKTLADFDPRVSIRLPSTSG 333
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 126/279 (45%), Gaps = 64/279 (22%)
Query: 20 LIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-VAIKIVHKGETPEEIAKKE-SRFAREVAM 77
+ID L +G +GEG V EG K + ++K+ K + +++E F E A
Sbjct: 30 VIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAAC 89
Query: 78 LSRVQHRNLVKFIGACKE------PVMVIVTELLSGGTLRKYLLNMR----PRCLDVCVA 127
+ H N+++ +G C E P +++ + G L YLL R P+ + +
Sbjct: 90 MKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTL 149
Query: 128 IGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETG 187
+ F +DIA ME L + +HRDL N +L +D+ T+ +ADFGL+++ +G
Sbjct: 150 LKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDM-TVCVADFGLSKK--------IYSG 200
Query: 188 TY-----------RWMAPE-----LYST--------VTLRQ----------GEKKH---- 209
Y +W+A E +Y++ VT+ + G + H
Sbjct: 201 DYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYD 260
Query: 210 ---YNHKNVRPSAENVPEELSIILTSCWKEDPNARPNFT 245
+ H+ +P E+ +EL I+ SCW+ DP RP F+
Sbjct: 261 YLLHGHRLKQP--EDCLDELYEIMYSCWRTDPLDRPTFS 297
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 131/301 (43%), Gaps = 74/301 (24%)
Query: 3 SRSRFYLADELKLDAKWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-------VAIKIV 55
S + Y+ DE W + + + + +G+G+ VYEG K VAIK V
Sbjct: 4 SAADVYVPDE------WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV 57
Query: 56 HKGETPEEIAKKESRFAREVAMLSRVQHRNLVKFIGACKE--PVMVIVTELLSGGTLRKY 113
++ + ++ F E +++ ++V+ +G + P +VI+ EL++ G L+ Y
Sbjct: 58 NEAAS----MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIM-ELMTRGDLKSY 112
Query: 114 LLNMRPRCLDVCV--------AIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTI 165
L ++RP + V I A +IA M L+++ +HRDL N ++ ED T+
Sbjct: 113 LRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDF-TV 171
Query: 166 KLADFGLAREESLTEMMTAETGTY----------RWMAPE-------------------L 196
K+ DFG+ R+ ET Y RWM+PE L
Sbjct: 172 KIGDFGMTRD-------IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 224
Query: 197 YSTVTLRQGEKKHYNHKNV---------RPSAENVPEELSIILTSCWKEDPNARPNFTQI 247
+ TL + + +++ V +N P+ L ++ CW+ +P RP+F +I
Sbjct: 225 WEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEI 284
Query: 248 I 248
I
Sbjct: 285 I 285
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 125/301 (41%), Gaps = 65/301 (21%)
Query: 17 AKWLIDPKHLFVGPRIGEGAHAKVYEGKYKN-------QTVAIKIVHKGETPEEIAKKES 69
+KW L +G +G GA +V E +TVA+K++ +G T E
Sbjct: 11 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE----HR 66
Query: 70 RFAREVAMLSRVQHR-NLVKFIGACKEPV--MVIVTELLSGGTLRKYLLNMRPRCLDVCV 126
E+ +L + H N+V +GAC +P ++++TE G L YL + R + V
Sbjct: 67 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKV 126
Query: 127 A--------------IGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGL 172
A I ++ +A+ ME L S IHRDL N+LL+E +K+ DFGL
Sbjct: 127 APEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK-NVVKICDFGL 185
Query: 173 AREESLTEMMTAETGTYR----WMAPE-LYSTVTLRQGE--------------------- 206
AR + + G R WMAPE ++ V Q +
Sbjct: 186 AR-DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 244
Query: 207 --------KKHYNHKNVRPSAENVPEELSIILTSCWKEDPNARPNFTQIIQMLLNYLSAI 258
++ +R PE +L CW +P+ RP F+++++ L N L A
Sbjct: 245 VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTML-DCWHGEPSQRPTFSELVEHLGNLLQAN 303
Query: 259 A 259
A
Sbjct: 304 A 304
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 130/294 (44%), Gaps = 68/294 (23%)
Query: 10 ADELKLDAKWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-------VAIKIVHKGETPE 62
A ++ + +W + + + + +G+G+ VYEG K VAIK V++ +
Sbjct: 1 AADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS-- 58
Query: 63 EIAKKESRFAREVAMLSRVQHRNLVKFIGACKE--PVMVIVTELLSGGTLRKYLLNMRPR 120
++ F E +++ ++V+ +G + P +VI+ EL++ G L+ YL ++RP
Sbjct: 59 --MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIM-ELMTRGDLKSYLRSLRPA 115
Query: 121 CLDVCV--------AIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGL 172
+ V I A +IA M L+++ +HRDL N ++ ED T+K+ DFG+
Sbjct: 116 MANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDF-TVKIGDFGM 174
Query: 173 AREESLTEMMTAETGTY----------RWMAPE-------------------LYSTVTLR 203
R+ ET Y RWM+PE L+ TL
Sbjct: 175 TRD-------IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLA 227
Query: 204 QGEKKHYNHKNV---------RPSAENVPEELSIILTSCWKEDPNARPNFTQII 248
+ + +++ V +N P+ L ++ CW+ +P RP+F +II
Sbjct: 228 EQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 281
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 114/274 (41%), Gaps = 48/274 (17%)
Query: 20 LIDPKHLFVGPRIGEGAHAKVYEGKY-----KNQTVAIKIVHKGETPEEIAKKES--RFA 72
LI K L + ++G+G+ V G++ K +VA+K + P+ +++ E+ F
Sbjct: 4 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCL----KPDVLSQPEAMDDFI 59
Query: 73 REVAMLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFAL 132
REV + + HRNL++ G P M +VTEL G+L L + L + +A+
Sbjct: 60 REVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFL-LGTLSRYAV 118
Query: 133 DIARAMECLHSHGIIHRDLKPENLLL-TEDLKTIKLADFGLAR----EESLTEMMTAETG 187
+A M L S IHRDL NLLL T DL +K+ DFGL R + M
Sbjct: 119 QVAEGMGYLESKRFIHRDLAARNLLLATRDL--VKIGDFGLMRALPQNDDHXVMQEHRKV 176
Query: 188 TYRWMAPELYSTVTLRQGEK------------------------KHYNHKNVR-----PS 218
+ W APE T T HK + P
Sbjct: 177 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 236
Query: 219 AENVPEELSIILTSCWKEDPNARPNFTQIIQMLL 252
E+ P+++ ++ CW P RP F + LL
Sbjct: 237 PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLL 270
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 115/274 (41%), Gaps = 48/274 (17%)
Query: 20 LIDPKHLFVGPRIGEGAHAKVYEGKY-----KNQTVAIKIVHKGETPEEIAKKES--RFA 72
LI K L + ++G+G+ V G++ K +VA+K + P+ +++ E+ F
Sbjct: 14 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCL----KPDVLSQPEAMDDFI 69
Query: 73 REVAMLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFAL 132
REV + + HRNL++ G P M +VTEL G+L L + L + +A+
Sbjct: 70 REVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFL-LGTLSRYAV 128
Query: 133 DIARAMECLHSHGIIHRDLKPENLLL-TEDLKTIKLADFGLAR----EESLTEMMTAETG 187
+A M L S IHRDL NLLL T DL +K+ DFGL R + M
Sbjct: 129 QVAEGMGYLESKRFIHRDLAARNLLLATRDL--VKIGDFGLMRALPQNDDHXVMQEHRKV 186
Query: 188 TYRWMAPE-------------------LYSTVTLRQGEKKHYNHKNV----------RPS 218
+ W APE L+ T Q N + P
Sbjct: 187 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 246
Query: 219 AENVPEELSIILTSCWKEDPNARPNFTQIIQMLL 252
E+ P+++ ++ CW P RP F + LL
Sbjct: 247 PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLL 280
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 129/310 (41%), Gaps = 68/310 (21%)
Query: 10 ADELKLDA-KWLIDPKHLFVGPRIGEGAHAKVYEGKYKN-------QTVAIKIVHKGETP 61
A+ L DA KW L +G +G GA +V E +TVA+K++ +G T
Sbjct: 3 AERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH 62
Query: 62 EEIAKKESRFAREVAMLSRVQHR-NLVKFIGACKEP---VMVIVTELLSGGTLRKYLLNM 117
E E+ +L + H N+V +GAC +P +MVIV E G L YL +
Sbjct: 63 SE----HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSK 117
Query: 118 RPRCLDVCVA--------------IGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLK 163
R + VA I ++ +A+ ME L S IHRDL N+LL+E
Sbjct: 118 RNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK-N 176
Query: 164 TIKLADFGLAREESLTEMMTAETGTYR----WMAPE-LYSTVTLRQGE------------ 206
+K+ DFGLAR + + G R WMAPE ++ V Q +
Sbjct: 177 VVKICDFGLAR-DIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 235
Query: 207 -----------------KKHYNHKNVRPSAENVPEELSIILTSCWKEDPNARPNFTQIIQ 249
++ +R PE +L CW +P+ RP F+++++
Sbjct: 236 SLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTML-DCWHGEPSQRPTFSELVE 294
Query: 250 MLLNYLSAIA 259
L N L A A
Sbjct: 295 HLGNLLQANA 304
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 129/317 (40%), Gaps = 75/317 (23%)
Query: 11 DELKLD----------AKWLIDPKHLFVGPRIGEGAHAKVYEGKYKN-------QTVAIK 53
DEL LD +KW L +G +G GA +V E +TVA+K
Sbjct: 4 DELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVK 63
Query: 54 IVHKGETPEEIAKKESRFAREVAMLSRVQHR-NLVKFIGACKEPV--MVIVTELLSGGTL 110
++ +G T E E+ +L + H N+V +GAC +P ++++ E G L
Sbjct: 64 MLKEGATHSE----HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 111 RKYLLNMRPRCLDVCVA--------------IGFALDIARAMECLHSHGIIHRDLKPENL 156
YL + R + VA I ++ +A+ ME L S IHRDL N+
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNI 179
Query: 157 LLTEDLKTIKLADFGLAREESLTEMMTAETGTYR----WMAPE-LYSTVTLRQGE----- 206
LL+E +K+ DFGLAR + + G R WMAPE ++ V Q +
Sbjct: 180 LLSEK-NVVKICDFGLAR-DIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 237
Query: 207 ------------------------KKHYNHKNVRPSAENVPEELSIILTSCWKEDPNARP 242
++ +R PE +L CW +P+ RP
Sbjct: 238 VLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTML-DCWHGEPSQRP 296
Query: 243 NFTQIIQMLLNYLSAIA 259
F+++++ L N L A A
Sbjct: 297 TFSELVEHLGNLLQANA 313
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 122/278 (43%), Gaps = 51/278 (18%)
Query: 18 KWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAM 77
+W I + L +G IG+G +VY G++ + VAI+++ E+ K F REV
Sbjct: 27 EWDIPFEQLEIGELIGKGRFGQVYHGRWHGE-VAIRLIDIERDNEDQLKA---FKREVMA 82
Query: 78 LSRVQHRNLVKFIGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+ +H N+V F+GAC P + I+T L G TL + + + LDV A +I +
Sbjct: 83 YRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKI-VLDVNKTRQIAQEIVK 141
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEM------MTAETGTYR 190
M LH+ GI+H+DLK +N+ D + + DFGL + + + + G
Sbjct: 142 GMGYLHAKGILHKDLKSKNVFY--DNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLC 199
Query: 191 WMAPELYSTVTLRQGEKK--HYNHKNV--------------------------------- 215
+APE+ ++ E K H +V
Sbjct: 200 HLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGM 259
Query: 216 RPSAENV--PEELSIILTSCWKEDPNARPNFTQIIQML 251
+P+ + +E+S IL CW + RP FT+++ ML
Sbjct: 260 KPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDML 297
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 126/281 (44%), Gaps = 58/281 (20%)
Query: 18 KWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-------VAIKIVHKGETPEEIAKKESR 70
+W + + + + +G+G+ VYEG K VAIK V++ + ++
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS----MRERIE 59
Query: 71 FAREVAMLSRVQHRNLVKFIGACKE--PVMVIVTELLSGGTLRKYLLNMRPRCLDVCV-- 126
F E +++ ++V+ +G + P +VI+ EL++ G L+ YL ++RP + V
Sbjct: 60 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIM-ELMTRGDLKSYLRSLRPEMENNPVLA 118
Query: 127 ------AIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTE 180
I A +IA M L+++ +HRDL N ++ ED T+K+ DFG+ R+ + E
Sbjct: 119 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDF-TVKIGDFGMTRD--IXE 175
Query: 181 MMTAETGT-----YRWMAPE-------------------LYSTVTLRQGEKKHYNHKNV- 215
G RWM+PE L+ TL + + +++ V
Sbjct: 176 TDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL 235
Query: 216 --------RPSAENVPEELSIILTSCWKEDPNARPNFTQII 248
+N P+ L ++ CW+ +P RP+F +II
Sbjct: 236 RFVMEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEII 276
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 68/286 (23%)
Query: 18 KWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-------VAIKIVHKGETPEEIAKKESR 70
+W + + + + +G+G+ VYEG K VAIK V++ + ++
Sbjct: 10 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS----MRERIE 65
Query: 71 FAREVAMLSRVQHRNLVKFIGACKE--PVMVIVTELLSGGTLRKYLLNMRPRCLDVCV-- 126
F E +++ ++V+ +G + P +VI+ EL++ G L+ YL ++RP + V
Sbjct: 66 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIM-ELMTRGDLKSYLRSLRPEMENNPVLA 124
Query: 127 ------AIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTE 180
I A +IA M L+++ +HRDL N ++ ED T+K+ DFG+ R+
Sbjct: 125 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDF-TVKIGDFGMTRD----- 178
Query: 181 MMTAETGTY----------RWMAPE-------------------LYSTVTLRQGEKKHYN 211
ET Y RWM+PE L+ TL + + +
Sbjct: 179 --IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 236
Query: 212 HKNV---------RPSAENVPEELSIILTSCWKEDPNARPNFTQII 248
++ V +N P+ L ++ CW+ +P RP+F +II
Sbjct: 237 NEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 282
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 115/274 (41%), Gaps = 48/274 (17%)
Query: 20 LIDPKHLFVGPRIGEGAHAKVYEGKY-----KNQTVAIKIVHKGETPEEIAKKES--RFA 72
LI K L + ++G+G+ V G++ K +VA+K + P+ +++ E+ F
Sbjct: 4 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCL----KPDVLSQPEAMDDFI 59
Query: 73 REVAMLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFAL 132
REV + + HRNL++ G P M +VTEL G+L L + L + +A+
Sbjct: 60 REVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFL-LGTLSRYAV 118
Query: 133 DIARAMECLHSHGIIHRDLKPENLLL-TEDLKTIKLADFGLAR----EESLTEMMTAETG 187
+A M L S IHRDL NLLL T DL +K+ DFGL R + M
Sbjct: 119 QVAEGMGYLESKRFIHRDLAARNLLLATRDL--VKIGDFGLMRALPQNDDHYVMQEHRKV 176
Query: 188 TYRWMAPE-------------------LYSTVTLRQGEKKHYNHKNV----------RPS 218
+ W APE L+ T Q N + P
Sbjct: 177 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 236
Query: 219 AENVPEELSIILTSCWKEDPNARPNFTQIIQMLL 252
E+ P+++ ++ CW P RP F + LL
Sbjct: 237 PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLL 270
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 68/286 (23%)
Query: 18 KWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-------VAIKIVHKGETPEEIAKKESR 70
+W + + + + +G+G+ VYEG K VAIK V++ + ++
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS----MRERIE 61
Query: 71 FAREVAMLSRVQHRNLVKFIGACKE--PVMVIVTELLSGGTLRKYLLNMRPRCLDVCV-- 126
F E +++ ++V+ +G + P +VI+ EL++ G L+ YL ++RP + V
Sbjct: 62 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIM-ELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 127 ------AIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTE 180
I A +IA M L+++ +HRDL N ++ ED T+K+ DFG+ R+
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDF-TVKIGDFGMTRD----- 174
Query: 181 MMTAETGTY----------RWMAPE-------------------LYSTVTLRQGEKKHYN 211
ET Y RWM+PE L+ TL + + +
Sbjct: 175 --IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 232
Query: 212 HKNV---------RPSAENVPEELSIILTSCWKEDPNARPNFTQII 248
++ V +N P+ L ++ CW+ +P RP+F +II
Sbjct: 233 NEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 278
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 115/274 (41%), Gaps = 48/274 (17%)
Query: 20 LIDPKHLFVGPRIGEGAHAKVYEGKY-----KNQTVAIKIVHKGETPEEIAKKES--RFA 72
LI K L + ++G+G+ V G++ K +VA+K + P+ +++ E+ F
Sbjct: 14 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCL----KPDVLSQPEAMDDFI 69
Query: 73 REVAMLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFAL 132
REV + + HRNL++ G P M +VTEL G+L L + L + +A+
Sbjct: 70 REVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFL-LGTLSRYAV 128
Query: 133 DIARAMECLHSHGIIHRDLKPENLLL-TEDLKTIKLADFGLAR----EESLTEMMTAETG 187
+A M L S IHRDL NLLL T DL +K+ DFGL R + M
Sbjct: 129 QVAEGMGYLESKRFIHRDLAARNLLLATRDL--VKIGDFGLMRALPQNDDHYVMQEHRKV 186
Query: 188 TYRWMAPE-------------------LYSTVTLRQGEKKHYNHKNV----------RPS 218
+ W APE L+ T Q N + P
Sbjct: 187 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 246
Query: 219 AENVPEELSIILTSCWKEDPNARPNFTQIIQMLL 252
E+ P+++ ++ CW P RP F + LL
Sbjct: 247 PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLL 280
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 115/274 (41%), Gaps = 48/274 (17%)
Query: 20 LIDPKHLFVGPRIGEGAHAKVYEGKY-----KNQTVAIKIVHKGETPEEIAKKES--RFA 72
LI K L + ++G+G+ V G++ K +VA+K + P+ +++ E+ F
Sbjct: 8 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCL----KPDVLSQPEAMDDFI 63
Query: 73 REVAMLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFAL 132
REV + + HRNL++ G P M +VTEL G+L L + L + +A+
Sbjct: 64 REVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFL-LGTLSRYAV 122
Query: 133 DIARAMECLHSHGIIHRDLKPENLLL-TEDLKTIKLADFGLAR----EESLTEMMTAETG 187
+A M L S IHRDL NLLL T DL +K+ DFGL R + M
Sbjct: 123 QVAEGMGYLESKRFIHRDLAARNLLLATRDL--VKIGDFGLMRALPQNDDHYVMQEHRKV 180
Query: 188 TYRWMAPE-------------------LYSTVTLRQGEKKHYNHKNV----------RPS 218
+ W APE L+ T Q N + P
Sbjct: 181 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 240
Query: 219 AENVPEELSIILTSCWKEDPNARPNFTQIIQMLL 252
E+ P+++ ++ CW P RP F + LL
Sbjct: 241 PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLL 274
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 115/274 (41%), Gaps = 48/274 (17%)
Query: 20 LIDPKHLFVGPRIGEGAHAKVYEGKY-----KNQTVAIKIVHKGETPEEIAKKES--RFA 72
LI K L + ++G+G+ V G++ K +VA+K + P+ +++ E+ F
Sbjct: 8 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCL----KPDVLSQPEAMDDFI 63
Query: 73 REVAMLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFAL 132
REV + + HRNL++ G P M +VTEL G+L L + L + +A+
Sbjct: 64 REVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFL-LGTLSRYAV 122
Query: 133 DIARAMECLHSHGIIHRDLKPENLLL-TEDLKTIKLADFGLAR----EESLTEMMTAETG 187
+A M L S IHRDL NLLL T DL +K+ DFGL R + M
Sbjct: 123 QVAEGMGYLESKRFIHRDLAARNLLLATRDL--VKIGDFGLMRALPQNDDHYVMQEHRKV 180
Query: 188 TYRWMAPE-------------------LYSTVTLRQGEKKHYNHKNV----------RPS 218
+ W APE L+ T Q N + P
Sbjct: 181 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 240
Query: 219 AENVPEELSIILTSCWKEDPNARPNFTQIIQMLL 252
E+ P+++ ++ CW P RP F + LL
Sbjct: 241 PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLL 274
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 115/274 (41%), Gaps = 48/274 (17%)
Query: 20 LIDPKHLFVGPRIGEGAHAKVYEGKY-----KNQTVAIKIVHKGETPEEIAKKES--RFA 72
LI K L + ++G+G+ V G++ K +VA+K + P+ +++ E+ F
Sbjct: 4 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCL----KPDVLSQPEAMDDFI 59
Query: 73 REVAMLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFAL 132
REV + + HRNL++ G P M +VTEL G+L L + L + +A+
Sbjct: 60 REVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFL-LGTLSRYAV 118
Query: 133 DIARAMECLHSHGIIHRDLKPENLLL-TEDLKTIKLADFGLAR----EESLTEMMTAETG 187
+A M L S IHRDL NLLL T DL +K+ DFGL R + M
Sbjct: 119 QVAEGMGYLESKRFIHRDLAARNLLLATRDL--VKIGDFGLMRALPQNDDHYVMQEHRKV 176
Query: 188 TYRWMAPE-------------------LYSTVTLRQGEKKHYNHKNV----------RPS 218
+ W APE L+ T Q N + P
Sbjct: 177 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 236
Query: 219 AENVPEELSIILTSCWKEDPNARPNFTQIIQMLL 252
E+ P+++ ++ CW P RP F + LL
Sbjct: 237 PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLL 270
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 129/317 (40%), Gaps = 75/317 (23%)
Query: 11 DELKLD----------AKWLIDPKHLFVGPRIGEGAHAKVYEGKYKN-------QTVAIK 53
DEL LD +KW L +G +G GA +V E +TVA+K
Sbjct: 4 DELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVK 63
Query: 54 IVHKGETPEEIAKKESRFAREVAMLSRVQHR-NLVKFIGACKEPV--MVIVTELLSGGTL 110
++ +G T E E+ +L + H N+V +GAC +P ++++ E G L
Sbjct: 64 MLKEGATHSE----HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 111 RKYLLNMRPRCLDVCVA--------------IGFALDIARAMECLHSHGIIHRDLKPENL 156
YL + R + VA I ++ +A+ ME L S IHRDL N+
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNI 179
Query: 157 LLTEDLKTIKLADFGLAREESLTEMMTAETGTYR----WMAPE-LYSTVTLRQGE----- 206
LL+E +K+ DFGLAR + + G R WMAPE ++ V Q +
Sbjct: 180 LLSEK-NVVKICDFGLAR-DIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 237
Query: 207 ------------------------KKHYNHKNVRPSAENVPEELSIILTSCWKEDPNARP 242
++ +R PE +L CW +P+ RP
Sbjct: 238 VLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTML-DCWHGEPSQRP 296
Query: 243 NFTQIIQMLLNYLSAIA 259
F+++++ L N L A A
Sbjct: 297 TFSELVEHLGNLLQANA 313
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 129/317 (40%), Gaps = 75/317 (23%)
Query: 11 DELKLD----------AKWLIDPKHLFVGPRIGEGAHAKVYEGKYKN-------QTVAIK 53
DEL LD +KW L +G +G GA +V E +TVA+K
Sbjct: 4 DELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVK 63
Query: 54 IVHKGETPEEIAKKESRFAREVAMLSRVQHR-NLVKFIGACKEPV--MVIVTELLSGGTL 110
++ +G T E E+ +L + H N+V +GAC +P ++++ E G L
Sbjct: 64 MLKEGATHSE----HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 111 RKYLLNMRPRCLDVCVA--------------IGFALDIARAMECLHSHGIIHRDLKPENL 156
YL + R + VA I ++ +A+ ME L S IHRDL N+
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNI 179
Query: 157 LLTEDLKTIKLADFGLAREESLTEMMTAETGTYR----WMAPE-LYSTVTLRQGE----- 206
LL+E +K+ DFGLAR + + G R WMAPE ++ V Q +
Sbjct: 180 LLSEK-NVVKICDFGLAR-DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 237
Query: 207 ------------------------KKHYNHKNVRPSAENVPEELSIILTSCWKEDPNARP 242
++ +R PE +L CW +P+ RP
Sbjct: 238 VLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTML-DCWHGEPSQRP 296
Query: 243 NFTQIIQMLLNYLSAIA 259
F+++++ L N L A A
Sbjct: 297 TFSELVEHLGNLLQANA 313
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 129/317 (40%), Gaps = 75/317 (23%)
Query: 11 DELKLD----------AKWLIDPKHLFVGPRIGEGAHAKVYEGKYKN-------QTVAIK 53
DEL LD +KW L +G +G GA +V E +TVA+K
Sbjct: 41 DELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVK 100
Query: 54 IVHKGETPEEIAKKESRFAREVAMLSRVQHR-NLVKFIGACKEPV--MVIVTELLSGGTL 110
++ +G T E E+ +L + H N+V +GAC +P ++++ E G L
Sbjct: 101 MLKEGATHSE----HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 156
Query: 111 RKYLLNMRPRCLDVCVA--------------IGFALDIARAMECLHSHGIIHRDLKPENL 156
YL + R + VA I ++ +A+ ME L S IHRDL N+
Sbjct: 157 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNI 216
Query: 157 LLTEDLKTIKLADFGLAREESLTEMMTAETGTYR----WMAPE-LYSTVTLRQGE----- 206
LL+E +K+ DFGLAR + + G R WMAPE ++ V Q +
Sbjct: 217 LLSEK-NVVKICDFGLAR-DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 274
Query: 207 ------------------------KKHYNHKNVRPSAENVPEELSIILTSCWKEDPNARP 242
++ +R PE +L CW +P+ RP
Sbjct: 275 VLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTML-DCWHGEPSQRP 333
Query: 243 NFTQIIQMLLNYLSAIA 259
F+++++ L N L A A
Sbjct: 334 TFSELVEHLGNLLQANA 350
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 135/311 (43%), Gaps = 74/311 (23%)
Query: 5 SRFYLADELKLDAKWLIDPKHLFVGPRIGEGAHAKVYEGKYKN-------QTVAIKIVHK 57
S Y+ DE W + + + + +G+G+ VYEG ++ VA+K V++
Sbjct: 5 SSVYVPDE------WEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE 58
Query: 58 GETPEEIAKKESRFAREVAMLSRVQHRNLVKFIGACK--EPVMVIVTELLSGGTLRKYLL 115
+ ++ F E +++ ++V+ +G +P +V++ EL++ G L+ YL
Sbjct: 59 SAS----LRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVM-ELMAHGDLKSYLR 113
Query: 116 NMRPRCLD--------VCVAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKL 167
++RP + + I A +IA M L++ +HR+L N ++ D T+K+
Sbjct: 114 SLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDF-TVKI 172
Query: 168 ADFGLAREESLTEMMTAETGTY----------RWMAPE-------------------LYS 198
DFG+ R+ ET Y RWMAPE L+
Sbjct: 173 GDFGMTRD-------IYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE 225
Query: 199 TVTLRQGEKKHYNHKNV---------RPSAENVPEELSIILTSCWKEDPNARPNFTQIIQ 249
+L + + +++ V +N PE ++ ++ CW+ +PN RP F +I+
Sbjct: 226 ITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVN 285
Query: 250 MLLNYLSAIAP 260
+L + L P
Sbjct: 286 LLKDDLHPSFP 296
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 135/311 (43%), Gaps = 74/311 (23%)
Query: 5 SRFYLADELKLDAKWLIDPKHLFVGPRIGEGAHAKVYEGKYKN-------QTVAIKIVHK 57
S Y+ DE W + + + + +G+G+ VYEG ++ VA+K V++
Sbjct: 4 SSVYVPDE------WEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE 57
Query: 58 GETPEEIAKKESRFAREVAMLSRVQHRNLVKFIGACK--EPVMVIVTELLSGGTLRKYLL 115
+ ++ F E +++ ++V+ +G +P +V++ EL++ G L+ YL
Sbjct: 58 SAS----LRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVM-ELMAHGDLKSYLR 112
Query: 116 NMRPRCLD--------VCVAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKL 167
++RP + + I A +IA M L++ +HR+L N ++ D T+K+
Sbjct: 113 SLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDF-TVKI 171
Query: 168 ADFGLAREESLTEMMTAETGTY----------RWMAPE-------------------LYS 198
DFG+ R+ ET Y RWMAPE L+
Sbjct: 172 GDFGMTRD-------IYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE 224
Query: 199 TVTLRQGEKKHYNHKNV---------RPSAENVPEELSIILTSCWKEDPNARPNFTQIIQ 249
+L + + +++ V +N PE ++ ++ CW+ +PN RP F +I+
Sbjct: 225 ITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVN 284
Query: 250 MLLNYLSAIAP 260
+L + L P
Sbjct: 285 LLKDDLHPSFP 295
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 112/259 (43%), Gaps = 46/259 (17%)
Query: 32 IGEGAHAKVYEGKYK-----NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNL 86
IG G +V G+ K VAIK + G T K+ F E +++ + H N+
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYT----EKQRRDFLGEASIMGQFDHPNI 85
Query: 87 VKFIGAC--KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
+ G +PVM IVTE + G+L +L + V +G I+ M+ L
Sbjct: 86 IHLEGVVTKSKPVM-IVTEYMENGSLDTFLKKNDGQ-FTVIQLVGMLRGISAGMKYLSDM 143
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLAR--EESLTEMMTAETGTY--RWMAPEL---- 196
G +HRDL N+L+ +L K++DFGL+R E+ T G RW APE
Sbjct: 144 GYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFR 202
Query: 197 ----------YSTV---TLRQGEKKHYNHKNVR-----------PSAENVPEELSIILTS 232
Y V + GE+ ++ N PS + P L ++
Sbjct: 203 KFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGYRLPSPMDCPAALYQLMLD 262
Query: 233 CWKEDPNARPNFTQIIQML 251
CW+++ N+RP F +I+ ML
Sbjct: 263 CWQKERNSRPKFDEIVNML 281
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 130/293 (44%), Gaps = 58/293 (19%)
Query: 18 KWLIDPKHLFVGPRIGEGAHAKVYEGKYKN-------QTVAIKIVHKGETPEEIAKKESR 70
+W + + + + +G+G+ VYEG ++ VA+K V++ + ++
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS----LRERIE 66
Query: 71 FAREVAMLSRVQHRNLVKFIGACK--EPVMVIVTELLSGGTLRKYLLNMRPRCLD----- 123
F E +++ ++V+ +G +P +V++ EL++ G L+ YL ++RP +
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVM-ELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 124 ---VCVAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTE 180
+ I A +IA M L++ +HRDL N ++ D T+K+ DFG+ R+ + E
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDF-TVKIGDFGMTRD--IXE 182
Query: 181 MMTAETGT-----YRWMAPE-------------------LYSTVTLRQGEKKHYNHKNV- 215
G RWMAPE L+ +L + + +++ V
Sbjct: 183 TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 242
Query: 216 --------RPSAENVPEELSIILTSCWKEDPNARPNFTQIIQMLLNYLSAIAP 260
+N PE ++ ++ CW+ +P RP F +I+ +L + L P
Sbjct: 243 KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFP 295
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 130/293 (44%), Gaps = 58/293 (19%)
Query: 18 KWLIDPKHLFVGPRIGEGAHAKVYEGKYKN-------QTVAIKIVHKGETPEEIAKKESR 70
+W + + + + +G+G+ VYEG ++ VA+K V++ + ++
Sbjct: 8 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS----LRERIE 63
Query: 71 FAREVAMLSRVQHRNLVKFIGACK--EPVMVIVTELLSGGTLRKYLLNMRPRCLD----- 123
F E +++ ++V+ +G +P +V++ EL++ G L+ YL ++RP +
Sbjct: 64 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVM-ELMAHGDLKSYLRSLRPEAENNPGRP 122
Query: 124 ---VCVAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTE 180
+ I A +IA M L++ +HRDL N ++ D T+K+ DFG+ R+ + E
Sbjct: 123 PPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDF-TVKIGDFGMTRD--IXE 179
Query: 181 MMTAETGT-----YRWMAPE-------------------LYSTVTLRQGEKKHYNHKNV- 215
G RWMAPE L+ +L + + +++ V
Sbjct: 180 TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 239
Query: 216 --------RPSAENVPEELSIILTSCWKEDPNARPNFTQIIQMLLNYLSAIAP 260
+N PE ++ ++ CW+ +P RP F +I+ +L + L P
Sbjct: 240 KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFP 292
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 129/314 (41%), Gaps = 73/314 (23%)
Query: 11 DELKLD----------AKWLIDPKHLFVGPRIGEGAHAKVYEGKY-------KNQTVAIK 53
DEL LD +KW L +G +G GA +V E +TVA+K
Sbjct: 4 DELPLDEHCERLPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVK 63
Query: 54 IVHKGETPEEIAKKESRFAREVAMLSRVQHR-NLVKFIGACKEP---VMVIVTELLSGGT 109
++ +G T E E+ +L + H N+V +GAC +P +MVIV E G
Sbjct: 64 MLKEGATHSE----HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV-EFCKFGN 118
Query: 110 LRKYLLNMRPRC----------LDVCVAIGFALDIARAMECLHSHGIIHRDLKPENLLLT 159
L YL + R L + I ++ +A+ ME L S IHRDL N+LL+
Sbjct: 119 LSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLS 178
Query: 160 EDLKTIKLADFGLAREESLTEMMTAETGTYR----WMAPE-LYSTVTLRQGE-------- 206
E +K+ DFGLAR + + G R WMAPE ++ V Q +
Sbjct: 179 EK-NVVKIXDFGLAR-DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 236
Query: 207 ---------------------KKHYNHKNVRPSAENVPEELSIILTSCWKEDPNARPNFT 245
++ +R PE +L CW +P+ RP F+
Sbjct: 237 WEIFSLGASPYPGVKIDEEFXRRLKEGTRMRAPDYTTPEMYQTML-DCWHGEPSQRPTFS 295
Query: 246 QIIQMLLNYLSAIA 259
++++ L N L A A
Sbjct: 296 ELVEHLGNLLQANA 309
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 125/286 (43%), Gaps = 68/286 (23%)
Query: 18 KWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQT-------VAIKIVHKGETPEEIAKKESR 70
+W + + + + +G+G+ VYEG K VAIK V++ + ++
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS----MRERIE 61
Query: 71 FAREVAMLSRVQHRNLVKFIGACKE--PVMVIVTELLSGGTLRKYLLNMRPRCLDVCV-- 126
F E +++ ++V+ +G + P +VI+ EL++ G L+ YL ++RP + V
Sbjct: 62 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIM-ELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 127 ------AIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTE 180
I A +IA M L+++ +HRDL N + ED T+K+ DFG+ R+
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCXVAEDF-TVKIGDFGMTRD----- 174
Query: 181 MMTAETGTY----------RWMAPE-------------------LYSTVTLRQGEKKHYN 211
ET Y RWM+PE L+ TL + + +
Sbjct: 175 --IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 232
Query: 212 HKNV---------RPSAENVPEELSIILTSCWKEDPNARPNFTQII 248
++ V +N P+ L ++ CW+ +P RP+F +II
Sbjct: 233 NEQVLRFVMEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEII 278
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 130/298 (43%), Gaps = 68/298 (22%)
Query: 18 KWLIDPKHLFVGPRIGEGAHAKVYEGKYKN-------QTVAIKIVHKGETPEEIAKKESR 70
+W + + + + +G+G+ VYEG ++ VA+K V++ + ++
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS----LRERIE 66
Query: 71 FAREVAMLSRVQHRNLVKFIGACK--EPVMVIVTELLSGGTLRKYLLNMRPRCLD----- 123
F E +++ ++V+ +G +P +V++ EL++ G L+ YL ++RP +
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVM-ELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 124 ---VCVAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTE 180
+ I A +IA M L++ +HRDL N ++ D T+K+ DFG+ R+
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDF-TVKIGDFGMTRD----- 179
Query: 181 MMTAETGTY----------RWMAPE-------------------LYSTVTLRQGEKKHYN 211
ET Y RWMAPE L+ +L + + +
Sbjct: 180 --IYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS 237
Query: 212 HKNV---------RPSAENVPEELSIILTSCWKEDPNARPNFTQIIQMLLNYLSAIAP 260
++ V +N PE ++ ++ CW+ +P RP F +I+ +L + L P
Sbjct: 238 NEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFP 295
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 128/313 (40%), Gaps = 71/313 (22%)
Query: 11 DELKLD----------AKWLIDPKHLFVGPRIGEGAHAKVYEGKY-------KNQTVAIK 53
DEL LD +KW L +G +G GA +V E +TVA+K
Sbjct: 4 DELPLDEHCERLPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVK 63
Query: 54 IVHKGETPEEIAKKESRFAREVAMLSRVQHR-NLVKFIGACKEPV--MVIVTELLSGGTL 110
++ +G T E E+ +L + H N+V +GAC +P ++++ E G L
Sbjct: 64 MLKEGATHSE----HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 111 RKYLLNMRPRC----------LDVCVAIGFALDIARAMECLHSHGIIHRDLKPENLLLTE 160
YL + R L + I ++ +A+ ME L S IHRDL N+LL+E
Sbjct: 120 STYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSE 179
Query: 161 DLKTIKLADFGLAREESLTEMMTAETGTYR----WMAPE-LYSTVTLRQGE--------- 206
+K+ DFGLAR + + G R WMAPE ++ V Q +
Sbjct: 180 K-NVVKICDFGLAR-DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLW 237
Query: 207 --------------------KKHYNHKNVRPSAENVPEELSIILTSCWKEDPNARPNFTQ 246
++ +R PE +L CW +P+ RP F++
Sbjct: 238 EIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTML-DCWHGEPSQRPTFSE 296
Query: 247 IIQMLLNYLSAIA 259
+++ L N L A A
Sbjct: 297 LVEHLGNLLQANA 309
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 116/276 (42%), Gaps = 54/276 (19%)
Query: 32 IGEGAHAKVYEGKYK-----NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNL 86
IG G +V G K VAIK + G T K+ F E +++ + H N+
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYT----EKQRRDFLSEASIMGQFDHPNV 96
Query: 87 VKFIGACKE--PVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
+ G + PVM+I TE + G+L +L + V +G IA M+ L
Sbjct: 97 IHLEGVVTKSTPVMII-TEFMENGSLDSFLRQNDGQ-FTVIQLVGMLRGIAAGMKYLADM 154
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLAR---EESLTEMMTAETGT---YRWMAPEL-- 196
+HRDL N+L+ +L K++DFGL+R +++ T+ G RW APE
Sbjct: 155 NYVHRDLAARNILVNSNL-VCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQ 213
Query: 197 ------------YSTV---TLRQGEKKHYNHKNVR-----------PSAENVPEELSIIL 230
Y V + GE+ +++ N P + P L ++
Sbjct: 214 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQLM 273
Query: 231 TSCWKEDPNARPNFTQIIQMLL------NYLSAIAP 260
CW++D N RP F QI+ L N L A+AP
Sbjct: 274 LDCWQKDRNHRPKFGQIVNTLDKMIRNPNSLKAMAP 309
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 129/316 (40%), Gaps = 75/316 (23%)
Query: 11 DELKLD----------AKWLIDPKHLFVGPRIGEGAHAKVYEGKY-------KNQTVAIK 53
DEL LD +KW L +G +G GA +V E +TVA+K
Sbjct: 6 DELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVK 65
Query: 54 IVHKGETPEEIAKKESRFAREVAMLSRVQHR-NLVKFIGACKEP---VMVIVTELLSGGT 109
++ +G T E E+ +L + H N+V +GAC +P +MVIV E G
Sbjct: 66 MLKEGATHSE----HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV-EFCKFGN 120
Query: 110 LRKYLLNMRPRC------------LDVCVAIGFALDIARAMECLHSHGIIHRDLKPENLL 157
L YL + R L + I ++ +A+ ME L S IHRDL N+L
Sbjct: 121 LSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNIL 180
Query: 158 LTEDLKTIKLADFGLAREESLTEMMTAETGTYR----WMAPE-LYSTVTLRQGE------ 206
L+E +K+ DFGLAR + + G R WMAPE ++ V Q +
Sbjct: 181 LSEK-NVVKICDFGLAR-DIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 238
Query: 207 -----------------------KKHYNHKNVRPSAENVPEELSIILTSCWKEDPNARPN 243
++ +R PE +L CW +P+ RP
Sbjct: 239 LLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTML-DCWHGEPSQRPT 297
Query: 244 FTQIIQMLLNYLSAIA 259
F+++++ L N L A A
Sbjct: 298 FSELVEHLGNLLQANA 313
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 135/302 (44%), Gaps = 49/302 (16%)
Query: 9 LADELKLDAKWLIDPKHLF-VGPRIGEGAHAKVYEGKYKNQTVA-IKIVHKGETPEEIAK 66
++DELK + ++ P+ F +G +G+G V E + K + + +K+ K + IA
Sbjct: 7 ISDELKEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIAS 66
Query: 67 KE-SRFAREVAMLSRVQHRNLVKFIGAC-------KEPVMVIVTELLSGGTLRKYLLNMR 118
+ F RE A + H ++ K +G + P+ +++ + G L +LL R
Sbjct: 67 SDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASR 126
Query: 119 ----PRCLDVCVAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR 174
P L + + F +DIA ME L S IHRDL N +L ED+ T+ +ADFGL+R
Sbjct: 127 IGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDM-TVCVADFGLSR 185
Query: 175 E---ESLTEMMTAETGTYRWMAPE-----LYSTVT------------LRQGEKKH----- 209
+ A +W+A E LY+ + + +G+ +
Sbjct: 186 KIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIEN 245
Query: 210 ---YNH---KNVRPSAENVPEELSIILTSCWKEDPNARPNFTQI---IQMLLNYLSAIAP 260
YN+ N EE+ ++ CW DP RP+FT + ++ +L +LS ++
Sbjct: 246 AEIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLST 305
Query: 261 PE 262
+
Sbjct: 306 SQ 307
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 130/298 (43%), Gaps = 68/298 (22%)
Query: 18 KWLIDPKHLFVGPRIGEGAHAKVYEGKYKN-------QTVAIKIVHKGETPEEIAKKESR 70
+W + + + + +G+G+ VYEG ++ VA+K V++ + ++
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS----LRERIE 66
Query: 71 FAREVAMLSRVQHRNLVKFIGACK--EPVMVIVTELLSGGTLRKYLLNMRPRCLD----- 123
F E +++ ++V+ +G +P +V++ EL++ G L+ YL ++RP +
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVM-ELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 124 ---VCVAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTE 180
+ I A +IA M L++ +HRDL N ++ D T+K+ DFG+ R+
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDF-TVKIGDFGMTRD----- 179
Query: 181 MMTAETGTY----------RWMAPE-------------------LYSTVTLRQGEKKHYN 211
ET Y RWMAPE L+ +L + + +
Sbjct: 180 --IYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS 237
Query: 212 HKNV---------RPSAENVPEELSIILTSCWKEDPNARPNFTQIIQMLLNYLSAIAP 260
++ V +N PE ++ ++ CW+ +P RP F +I+ +L + L P
Sbjct: 238 NEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFP 295
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 129/317 (40%), Gaps = 76/317 (23%)
Query: 11 DELKLD----------AKWLIDPKHLFVGPRIGEGAHAKVYEGKYKN-------QTVAIK 53
DEL LD +KW L +G +G GA +V E +TVA+K
Sbjct: 5 DELPLDEHCERLPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVK 64
Query: 54 IVHKGETPEEIAKKESRFAREVAMLSRVQHR-NLVKFIGACKEP---VMVIVTELLSGGT 109
++ +G T E E+ +L + H N+V +GAC +P +MVIV E G
Sbjct: 65 MLKEGATHSE----HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV-EFCKFGN 119
Query: 110 LRKYLLNMRPRC-------------LDVCVAIGFALDIARAMECLHSHGIIHRDLKPENL 156
L YL + R L + I ++ +A+ ME L S IHRDL N+
Sbjct: 120 LSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNI 179
Query: 157 LLTEDLKTIKLADFGLAREESLTEMMTAETGTYR----WMAPE-LYSTVTLRQGE----- 206
LL+E +K+ DFGLAR + + G R WMAPE ++ V Q +
Sbjct: 180 LLSEK-NVVKICDFGLAR-DIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 237
Query: 207 ------------------------KKHYNHKNVRPSAENVPEELSIILTSCWKEDPNARP 242
++ +R PE +L CW +P+ RP
Sbjct: 238 VLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTML-DCWHGEPSQRP 296
Query: 243 NFTQIIQMLLNYLSAIA 259
F+++++ L N L A A
Sbjct: 297 TFSELVEHLGNLLQANA 313
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 129/296 (43%), Gaps = 61/296 (20%)
Query: 32 IGEGAHAKVYEGKYKN-------QTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHR 84
+G+G+ VYEG ++ VA+K V++ + ++ F E +++
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS----LRERIEFLNEASVMKGFTCH 79
Query: 85 NLVKFIGACK--EPVMVIVTELLSGGTLRKYLLNMRPRCLD--------VCVAIGFALDI 134
++V+ +G +P +V++ EL++ G L+ YL ++RP + + I A +I
Sbjct: 80 HVVRLLGVVSKGQPTLVVM-ELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 138
Query: 135 ARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGT---YRW 191
A M L++ +HRDL N ++ D T+K+ DFG+ R+ T+ RW
Sbjct: 139 ADGMAYLNAKKFVHRDLAARNCMVAHDF-TVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 197
Query: 192 MAPE-------------------LYSTVTLRQGEKKHYNHKNV---------RPSAENVP 223
MAPE L+ +L + + +++ V +N P
Sbjct: 198 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCP 257
Query: 224 EELSIILTSCWKEDPNARPNFTQIIQMLLNYLSAIAPPEPMIPH-RIFNSENTILP 278
E ++ ++ CW+ +P RP F +I+ +L + L P P F+SE P
Sbjct: 258 ERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL------HPSFPEVSFFHSEENKAP 307
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 121/263 (46%), Gaps = 44/263 (16%)
Query: 32 IGEGAHAKVYEGKYK---NQTVAIKIVHKGETPEEIAKK-ESRFAREVAMLSRVQHRNLV 87
+G GA +VYEG+ N +++ K PE +++ E F E ++S++ H+N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVK-TLPEVCSEQDELDFLMEALIISKLNHQNIV 111
Query: 88 KFIGACKEPV-MVIVTELLSGGTLRKYLLNMRPR-----CLDVCVAIGFALDIARAMECL 141
+ IG + + I+ EL++GG L+ +L RPR L + + A DIA + L
Sbjct: 112 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 142 HSHGIIHRDLKPENLLLT--EDLKTIKLADFGLARE----------------------ES 177
+ IHRD+ N LLT + K+ DFG+AR+ E+
Sbjct: 172 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEA 231
Query: 178 LTE-MMTAETGTYRW--MAPELYSTVTLRQGEKKHYNHKNVRPSA------ENVPEELSI 228
E + T++T T+ + + E++S + K + S +N P +
Sbjct: 232 FMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR 291
Query: 229 ILTSCWKEDPNARPNFTQIIQML 251
I+T CW+ P RPNF I++ +
Sbjct: 292 IMTQCWQHQPEDRPNFAIILERI 314
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 121/263 (46%), Gaps = 44/263 (16%)
Query: 32 IGEGAHAKVYEGKYK---NQTVAIKIVHKGETPEEIAKK-ESRFAREVAMLSRVQHRNLV 87
+G GA +VYEG+ N +++ K PE +++ E F E ++S++ H+N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVK-TLPEVCSEQDELDFLMEALIISKLNHQNIV 97
Query: 88 KFIGACKEPV-MVIVTELLSGGTLRKYLLNMRPR-----CLDVCVAIGFALDIARAMECL 141
+ IG + + I+ EL++GG L+ +L RPR L + + A DIA + L
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 142 HSHGIIHRDLKPENLLLT--EDLKTIKLADFGLARE----------------------ES 177
+ IHRD+ N LLT + K+ DFG+AR+ E+
Sbjct: 158 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEA 217
Query: 178 LTE-MMTAETGTYRW--MAPELYSTVTLRQGEKKHYNHKNVRPSA------ENVPEELSI 228
E + T++T T+ + + E++S + K + S +N P +
Sbjct: 218 FMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR 277
Query: 229 ILTSCWKEDPNARPNFTQIIQML 251
I+T CW+ P RPNF I++ +
Sbjct: 278 IMTQCWQHQPEDRPNFAIILERI 300
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 119/282 (42%), Gaps = 68/282 (24%)
Query: 32 IGEGAHAKVYEGK------YKNQT-VAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHR 84
IGEGA +V++ + Y+ T VA+K++ + E A ++ F RE A+++ +
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKE----EASADMQADFQREAALMAEFDNP 110
Query: 85 NLVKFIGACK--EPVMVIVTELLSGGTLRKYLLNMRPRC--------------------- 121
N+VK +G C +P M ++ E ++ G L ++L +M P
Sbjct: 111 NIVKLLGVCAVGKP-MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPP 169
Query: 122 -LDVCVAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTE 180
L + A +A M L +HRDL N L+ E++ +K+ADFGL+R +
Sbjct: 170 PLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENM-VVKIADFGLSRNIYSAD 228
Query: 181 MMTAETGT---YRWMAPE--LYSTVT---------------LRQGEKKHYN--------- 211
A+ RWM PE Y+ T G + +Y
Sbjct: 229 YYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYY 288
Query: 212 --HKNVRPSAENVPEELSIILTSCWKEDPNARPNFTQIIQML 251
N+ EN P EL ++ CW + P RP+F I ++L
Sbjct: 289 VRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRIL 330
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 128/317 (40%), Gaps = 75/317 (23%)
Query: 11 DELKLD----------AKWLIDPKHLFVGPRIGEGAHAKVYEGKYKN-------QTVAIK 53
DEL LD +KW L +G +G GA +V E +TVA+K
Sbjct: 6 DELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVK 65
Query: 54 IVHKGETPEEIAKKESRFAREVAMLSRVQHR-NLVKFIGACKEPV--MVIVTELLSGGTL 110
++ +G T E E+ +L + H N+V +GAC +P ++++ E G L
Sbjct: 66 MLKEGATHSE----HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 121
Query: 111 RKYLLNMRPRCLDVCVA--------------IGFALDIARAMECLHSHGIIHRDLKPENL 156
YL + R + A I ++ +A+ ME L S IHRDL N+
Sbjct: 122 STYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNI 181
Query: 157 LLTEDLKTIKLADFGLAREESLTEMMTAETGTYR----WMAPE-LYSTVTLRQGE----- 206
LL+E +K+ DFGLAR + + G R WMAPE ++ V Q +
Sbjct: 182 LLSEK-NVVKICDFGLAR-DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 239
Query: 207 ------------------------KKHYNHKNVRPSAENVPEELSIILTSCWKEDPNARP 242
++ +R PE +L CW +P+ RP
Sbjct: 240 VLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTML-DCWHGEPSQRP 298
Query: 243 NFTQIIQMLLNYLSAIA 259
F+++++ L N L A A
Sbjct: 299 TFSELVEHLGNLLQANA 315
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 120/263 (45%), Gaps = 44/263 (16%)
Query: 32 IGEGAHAKVYEGKYK---NQTVAIKIVHKGETPEEIAKK-ESRFAREVAMLSRVQHRNLV 87
+G GA +VYEG+ N +++ K PE +++ E F E ++S+ H+N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVK-TLPEVCSEQDELDFLMEALIISKFNHQNIV 111
Query: 88 KFIGACKEPV-MVIVTELLSGGTLRKYLLNMRPR-----CLDVCVAIGFALDIARAMECL 141
+ IG + + I+ EL++GG L+ +L RPR L + + A DIA + L
Sbjct: 112 RCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 142 HSHGIIHRDLKPENLLLT--EDLKTIKLADFGLARE----------------------ES 177
+ IHRD+ N LLT + K+ DFG+AR+ E+
Sbjct: 172 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEA 231
Query: 178 LTE-MMTAETGTYRW--MAPELYSTVTLRQGEKKHYNHKNVRPSA------ENVPEELSI 228
E + T++T T+ + + E++S + K + S +N P +
Sbjct: 232 FMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR 291
Query: 229 ILTSCWKEDPNARPNFTQIIQML 251
I+T CW+ P RPNF I++ +
Sbjct: 292 IMTQCWQHQPEDRPNFAIILERI 314
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 119/261 (45%), Gaps = 44/261 (16%)
Query: 32 IGEGAHAKVYEGKYK---NQTVAIKIVHKGETPEEIAKK-ESRFAREVAMLSRVQHRNLV 87
+G GA +VYEG+ N +++ K PE +++ E F E ++S+ H+N+V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVK-TLPEVCSEQDELDFLMEALIISKFNHQNIV 96
Query: 88 KFIGACKEPV-MVIVTELLSGGTLRKYLLNMRPR-----CLDVCVAIGFALDIARAMECL 141
+ IG + + I+ EL++GG L+ +L RPR L + + A DIA + L
Sbjct: 97 RCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 142 HSHGIIHRDLKPENLLLT--EDLKTIKLADFGLARE----------------------ES 177
+ IHRD+ N LLT + K+ DFG+AR+ E+
Sbjct: 157 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEA 216
Query: 178 LTE-MMTAETGTYRW--MAPELYSTVTLRQGEKKHYNHKNVRPSA------ENVPEELSI 228
E + T++T T+ + + E++S + K + S +N P +
Sbjct: 217 FMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR 276
Query: 229 ILTSCWKEDPNARPNFTQIIQ 249
I+T CW+ P RPNF I++
Sbjct: 277 IMTQCWQHQPEDRPNFAIILE 297
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 120/263 (45%), Gaps = 44/263 (16%)
Query: 32 IGEGAHAKVYEGKYK---NQTVAIKIVHKGETPEEIAKK-ESRFAREVAMLSRVQHRNLV 87
+G GA +VYEG+ N +++ K PE +++ E F E ++S+ H+N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVK-TLPEVCSEQDELDFLMEALIISKFNHQNIV 97
Query: 88 KFIGACKEPV-MVIVTELLSGGTLRKYLLNMRPR-----CLDVCVAIGFALDIARAMECL 141
+ IG + + I+ EL++GG L+ +L RPR L + + A DIA + L
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 142 HSHGIIHRDLKPENLLLT--EDLKTIKLADFGLARE----------------------ES 177
+ IHRD+ N LLT + K+ DFG+AR+ E+
Sbjct: 158 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEA 217
Query: 178 LTE-MMTAETGTYRW--MAPELYSTVTLRQGEKKHYNHKNVRPSA------ENVPEELSI 228
E + T++T T+ + + E++S + K + S +N P +
Sbjct: 218 FMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR 277
Query: 229 ILTSCWKEDPNARPNFTQIIQML 251
I+T CW+ P RPNF I++ +
Sbjct: 278 IMTQCWQHQPEDRPNFAIILERI 300
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 120/263 (45%), Gaps = 44/263 (16%)
Query: 32 IGEGAHAKVYEGKYK---NQTVAIKIVHKGETPEEIAKK-ESRFAREVAMLSRVQHRNLV 87
+G GA +VYEG+ N +++ K PE +++ E F E ++S+ H+N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVK-TLPEVYSEQDELDFLMEALIISKFNHQNIV 111
Query: 88 KFIGACKEPV-MVIVTELLSGGTLRKYLLNMRPR-----CLDVCVAIGFALDIARAMECL 141
+ IG + + I+ EL++GG L+ +L RPR L + + A DIA + L
Sbjct: 112 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 142 HSHGIIHRDLKPENLLLT--EDLKTIKLADFGLARE----------------------ES 177
+ IHRD+ N LLT + K+ DFG+AR+ E+
Sbjct: 172 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEA 231
Query: 178 LTE-MMTAETGTYRW--MAPELYSTVTLRQGEKKHYNHKNVRPSA------ENVPEELSI 228
E + T++T T+ + + E++S + K + S +N P +
Sbjct: 232 FMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR 291
Query: 229 ILTSCWKEDPNARPNFTQIIQML 251
I+T CW+ P RPNF I++ +
Sbjct: 292 IMTQCWQHQPEDRPNFAIILERI 314
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 120/263 (45%), Gaps = 44/263 (16%)
Query: 32 IGEGAHAKVYEGKYK---NQTVAIKIVHKGETPEEIAKK-ESRFAREVAMLSRVQHRNLV 87
+G GA +VYEG+ N +++ K PE +++ E F E ++S+ H+N+V
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVK-TLPEVCSEQDELDFLMEALIISKFNHQNIV 103
Query: 88 KFIGACKEPV-MVIVTELLSGGTLRKYLLNMRPR-----CLDVCVAIGFALDIARAMECL 141
+ IG + + I+ EL++GG L+ +L RPR L + + A DIA + L
Sbjct: 104 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 163
Query: 142 HSHGIIHRDLKPENLLLT--EDLKTIKLADFGLARE----------------------ES 177
+ IHRD+ N LLT + K+ DFG+AR+ E+
Sbjct: 164 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEA 223
Query: 178 LTE-MMTAETGTYRW--MAPELYSTVTLRQGEKKHYNHKNVRPSA------ENVPEELSI 228
E + T++T T+ + + E++S + K + S +N P +
Sbjct: 224 FMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR 283
Query: 229 ILTSCWKEDPNARPNFTQIIQML 251
I+T CW+ P RPNF I++ +
Sbjct: 284 IMTQCWQHQPEDRPNFAIILERI 306
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 120/263 (45%), Gaps = 44/263 (16%)
Query: 32 IGEGAHAKVYEGKYK---NQTVAIKIVHKGETPEEIAKK-ESRFAREVAMLSRVQHRNLV 87
+G GA +VYEG+ N +++ K PE +++ E F E ++S+ H+N+V
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVK-TLPEVCSEQDELDFLMEALIISKFNHQNIV 88
Query: 88 KFIGACKEPV-MVIVTELLSGGTLRKYLLNMRPR-----CLDVCVAIGFALDIARAMECL 141
+ IG + + I+ EL++GG L+ +L RPR L + + A DIA + L
Sbjct: 89 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 148
Query: 142 HSHGIIHRDLKPENLLLT--EDLKTIKLADFGLARE----------------------ES 177
+ IHRD+ N LLT + K+ DFG+AR+ E+
Sbjct: 149 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEA 208
Query: 178 LTE-MMTAETGTYRW--MAPELYSTVTLRQGEKKHYNHKNVRPSA------ENVPEELSI 228
E + T++T T+ + + E++S + K + S +N P +
Sbjct: 209 FMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR 268
Query: 229 ILTSCWKEDPNARPNFTQIIQML 251
I+T CW+ P RPNF I++ +
Sbjct: 269 IMTQCWQHQPEDRPNFAIILERI 291
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 95/202 (47%), Gaps = 39/202 (19%)
Query: 20 LIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKE---------SR 70
+ P L G +G+G + AIK+ H+ ET E + KE
Sbjct: 6 IFRPSDLIHGEVLGKGCFGQ-----------AIKVTHR-ETGEVMVMKELIRFDEETQRT 53
Query: 71 FAREVAMLSRVQHRNLVKFIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIG 129
F +EV ++ ++H N++KFIG K+ + +TE + GGTLR + +M + +
Sbjct: 54 FLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQ-YPWSQRVS 112
Query: 130 FALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR--------EESLTEM 181
FA DIA M LHS IIHRDL N L+ E+ K + +ADFGLAR E L +
Sbjct: 113 FAKDIASGMAYLHSMNIIHRDLNSHNCLVREN-KNVVVADFGLARLMVDEKTQPEGLRSL 171
Query: 182 MTAE-------TGTYRWMAPEL 196
+ G WMAPE+
Sbjct: 172 KKPDRKKRYTVVGNPYWMAPEM 193
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 119/261 (45%), Gaps = 44/261 (16%)
Query: 32 IGEGAHAKVYEGKYK---NQTVAIKIVHKGETPEEIAKK-ESRFAREVAMLSRVQHRNLV 87
+G GA +VYEG+ N +++ K PE +++ E F E ++S+ H+N+V
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVK-TLPEVCSEQDELDFLMEALIISKFNHQNIV 113
Query: 88 KFIGACKEPV-MVIVTELLSGGTLRKYLLNMRPR-----CLDVCVAIGFALDIARAMECL 141
+ IG + + I+ EL++GG L+ +L RPR L + + A DIA + L
Sbjct: 114 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 173
Query: 142 HSHGIIHRDLKPENLLLT--EDLKTIKLADFGLARE----------------------ES 177
+ IHRD+ N LLT + K+ DFG+AR+ E+
Sbjct: 174 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEA 233
Query: 178 LTE-MMTAETGTYRW--MAPELYSTVTLRQGEKKHYNHKNVRPSA------ENVPEELSI 228
E + T++T T+ + + E++S + K + S +N P +
Sbjct: 234 FMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR 293
Query: 229 ILTSCWKEDPNARPNFTQIIQ 249
I+T CW+ P RPNF I++
Sbjct: 294 IMTQCWQHQPEDRPNFAIILE 314
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 119/261 (45%), Gaps = 44/261 (16%)
Query: 32 IGEGAHAKVYEGKYK---NQTVAIKIVHKGETPEEIAKK-ESRFAREVAMLSRVQHRNLV 87
+G GA +VYEG+ N +++ K PE +++ E F E ++S+ H+N+V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVK-TLPEVCSEQDELDFLMEALIISKFNHQNIV 96
Query: 88 KFIGACKEPV-MVIVTELLSGGTLRKYLLNMRPR-----CLDVCVAIGFALDIARAMECL 141
+ IG + + I+ EL++GG L+ +L RPR L + + A DIA + L
Sbjct: 97 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 142 HSHGIIHRDLKPENLLLT--EDLKTIKLADFGLARE----------------------ES 177
+ IHRD+ N LLT + K+ DFG+AR+ E+
Sbjct: 157 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEA 216
Query: 178 LTE-MMTAETGTYRW--MAPELYSTVTLRQGEKKHYNHKNVRPSA------ENVPEELSI 228
E + T++T T+ + + E++S + K + S +N P +
Sbjct: 217 FMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR 276
Query: 229 ILTSCWKEDPNARPNFTQIIQ 249
I+T CW+ P RPNF I++
Sbjct: 277 IMTQCWQHQPEDRPNFAIILE 297
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 119/261 (45%), Gaps = 44/261 (16%)
Query: 32 IGEGAHAKVYEGKYK---NQTVAIKIVHKGETPEEIAKK-ESRFAREVAMLSRVQHRNLV 87
+G GA +VYEG+ N +++ K PE +++ E F E ++S+ H+N+V
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVK-TLPEVCSEQDELDFLMEALIISKFNHQNIV 137
Query: 88 KFIGACKEPV-MVIVTELLSGGTLRKYLLNMRPR-----CLDVCVAIGFALDIARAMECL 141
+ IG + + I+ EL++GG L+ +L RPR L + + A DIA + L
Sbjct: 138 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 197
Query: 142 HSHGIIHRDLKPENLLLT--EDLKTIKLADFGLARE----------------------ES 177
+ IHRD+ N LLT + K+ DFG+AR+ E+
Sbjct: 198 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEA 257
Query: 178 LTE-MMTAETGTYRW--MAPELYSTVTLRQGEKKHYNHKNVRPSA------ENVPEELSI 228
E + T++T T+ + + E++S + K + S +N P +
Sbjct: 258 FMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR 317
Query: 229 ILTSCWKEDPNARPNFTQIIQ 249
I+T CW+ P RPNF I++
Sbjct: 318 IMTQCWQHQPEDRPNFAIILE 338
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 120/263 (45%), Gaps = 44/263 (16%)
Query: 32 IGEGAHAKVYEGKYK---NQTVAIKIVHKGETPEEIAKK-ESRFAREVAMLSRVQHRNLV 87
+G GA +VYEG+ N +++ K PE +++ E F E ++S+ H+N+V
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVK-TLPEVCSEQDELDFLMEALIISKFNHQNIV 114
Query: 88 KFIGACKEPV-MVIVTELLSGGTLRKYLLNMRPR-----CLDVCVAIGFALDIARAMECL 141
+ IG + + I+ EL++GG L+ +L RPR L + + A DIA + L
Sbjct: 115 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 174
Query: 142 HSHGIIHRDLKPENLLLT--EDLKTIKLADFGLARE----------------------ES 177
+ IHRD+ N LLT + K+ DFG+AR+ E+
Sbjct: 175 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEA 234
Query: 178 LTE-MMTAETGTYRW--MAPELYSTVTLRQGEKKHYNHKNVRPSA------ENVPEELSI 228
E + T++T T+ + + E++S + K + S +N P +
Sbjct: 235 FMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR 294
Query: 229 ILTSCWKEDPNARPNFTQIIQML 251
I+T CW+ P RPNF I++ +
Sbjct: 295 IMTQCWQHQPEDRPNFAIILERI 317
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 103/209 (49%), Gaps = 23/209 (11%)
Query: 1 MESRSRFYLADELKLDAKWLIDPKHLF-VGPRIGEGAHAKVYEGKY--KNQTVAIKIVH- 56
M S S DE+ L A L DP +F + +G G + +VY+G++ Q AIK++
Sbjct: 2 MASDSPARSLDEIDLSA--LRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDV 59
Query: 57 KGETPEEIAKKESRFAREVAMLSRV-QHRNLVKFIGAC--KEP-----VMVIVTELLSGG 108
G+ EEI + E+ ML + HRN+ + GA K P + +V E G
Sbjct: 60 TGDEEEEIKQ-------EINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAG 112
Query: 109 TLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLA 168
++ + N + L +I R + LH H +IHRD+K +N+LLTE+ + +KL
Sbjct: 113 SVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAE-VKLV 171
Query: 169 DFGL-AREESLTEMMTAETGTYRWMAPEL 196
DFG+ A+ + GT WMAPE+
Sbjct: 172 DFGVSAQLDRTVGRRNTFIGTPYWMAPEV 200
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 120/263 (45%), Gaps = 44/263 (16%)
Query: 32 IGEGAHAKVYEGKYK---NQTVAIKIVHKGETPEEIAKK-ESRFAREVAMLSRVQHRNLV 87
+G GA +VYEG+ N +++ K PE +++ E F E ++S+ H+N+V
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVK-TLPEVCSEQDELDFLMEALIISKFNHQNIV 123
Query: 88 KFIGACKEPV-MVIVTELLSGGTLRKYLLNMRPR-----CLDVCVAIGFALDIARAMECL 141
+ IG + + I+ EL++GG L+ +L RPR L + + A DIA + L
Sbjct: 124 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 183
Query: 142 HSHGIIHRDLKPENLLLT--EDLKTIKLADFGLARE----------------------ES 177
+ IHRD+ N LLT + K+ DFG+AR+ E+
Sbjct: 184 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEA 243
Query: 178 LTE-MMTAETGTYRW--MAPELYSTVTLRQGEKKHYNHKNVRPSA------ENVPEELSI 228
E + T++T T+ + + E++S + K + S +N P +
Sbjct: 244 FMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR 303
Query: 229 ILTSCWKEDPNARPNFTQIIQML 251
I+T CW+ P RPNF I++ +
Sbjct: 304 IMTQCWQHQPEDRPNFAIILERI 326
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 114/271 (42%), Gaps = 48/271 (17%)
Query: 21 IDPKHLFVGPRIGEGAHAKVYEGKYK-----NQTVAIKIVHKGETPEEIAKKESRFAREV 75
ID + + IG G +V G+ K VAIK + G T K+ F E
Sbjct: 26 IDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTD----KQRRDFLSEA 81
Query: 76 AMLSRVQHRNLVKFIGA---CKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFAL 132
+++ + H N++ G CK PVM+I TE + G+L +L R V +G
Sbjct: 82 SIMGQFDHPNIIHLEGVVTKCK-PVMII-TEYMENGSLDAFLRKNDGR-FTVIQLVGMLR 138
Query: 133 DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR--EESLTEMMTAETGTY- 189
I M+ L +HRDL N+L+ +L K++DFG++R E+ T G
Sbjct: 139 GIGSGMKYLSDMSAVHRDLAARNILVNSNL-VCKVSDFGMSRVLEDDPEAAYTTRGGKIP 197
Query: 190 -RWMAPEL--------------YSTV---TLRQGEKKHYNHKNVR-----------PSAE 220
RW APE Y V + GE+ +++ N P
Sbjct: 198 IRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPM 257
Query: 221 NVPEELSIILTSCWKEDPNARPNFTQIIQML 251
+ P L ++ CW+++ + RP F QI+ ML
Sbjct: 258 DCPIALHQLMLDCWQKERSDRPKFGQIVNML 288
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 117/293 (39%), Gaps = 56/293 (19%)
Query: 12 ELKLDAKWLIDPKHLFVGPRIGEGAHAKVYEGK---YKNQTVAIKIVHKGETPEEIAKKE 68
+L + KW +L G +G GA KV E + +K+ K A ++
Sbjct: 34 QLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK 93
Query: 69 SRFAREVAMLSRV-QHRNLVKFIGACKE--PVMVIVTELLSGGTLRKYLLNMRPRCLDVC 125
E+ ++S + QH N+V +GAC PV+VI TE G L +L RP L+
Sbjct: 94 EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVI-TEYCCYGDLLNFLRRKRPPGLEYS 152
Query: 126 VA--------------IGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFG 171
+ F+ +A+ M L S IHRD+ N+LLT K+ DFG
Sbjct: 153 YNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNG-HVAKIGDFG 211
Query: 172 LAREESLTEMMTAETGTYR----WMAPE-LYSTVTLRQGEKKHYN--------------- 211
LAR + + + G R WMAPE ++ V Q + Y
Sbjct: 212 LAR-DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYP 270
Query: 212 --------HKNVRPSAEN-----VPEELSIILTSCWKEDPNARPNFTQIIQML 251
+K V+ + P+ + I+ +CW +P RP F QI L
Sbjct: 271 GILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFL 323
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 92/172 (53%), Gaps = 14/172 (8%)
Query: 31 RIGEGAHAKVY--EGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
++G G + VY E N VAIK + P E + RF REV S++ H+N+V
Sbjct: 18 KLGGGGMSTVYLAEDTILNIKVAIKAIFI--PPREKEETLKRFEREVHNSSQLSHQNIVS 75
Query: 89 FIGACKEP-VMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGII 147
I +E +V E + G TL +Y+ + P +D AI F I ++ H I+
Sbjct: 76 MIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDT--AINFTNQILDGIKHAHDMRIV 133
Query: 148 HRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAET----GTYRWMAPE 195
HRD+KP+N+L+ + KT+K+ DFG+A+ +L+E +T GT ++ +PE
Sbjct: 134 HRDIKPQNILIDSN-KTLKIFDFGIAK--ALSETSLTQTNHVLGTVQYFSPE 182
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 113/273 (41%), Gaps = 50/273 (18%)
Query: 32 IGEGAHAKVYEGKYKN----QTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLV 87
+GEGA KV+ + N Q + V + + A+K+ F RE +L+ +QH ++V
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKD--FHREAELLTNLQHEHIV 78
Query: 88 KFIGACKE-PVMVIVTELLSGGTLRKYLLNMRPRC-----------LDVCVAIGFALDIA 135
KF G C E +++V E + G L K+L P L + A IA
Sbjct: 79 KFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIA 138
Query: 136 RAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY---RWM 192
M L S +HRDL N L+ E+L +K+ DFG++R+ T+ T RWM
Sbjct: 139 AGMVYLASQHFVHRDLATRNCLVGENL-LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWM 197
Query: 193 APE--LYSTVT---------------LRQGEKKHYNHKN-----------VRPSAENVPE 224
PE +Y T G++ Y N V P+
Sbjct: 198 PPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTCPQ 257
Query: 225 ELSIILTSCWKEDPNARPNFTQIIQMLLNYLSA 257
E+ ++ CW+ +P+ R N I +L N A
Sbjct: 258 EVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 114/271 (42%), Gaps = 48/271 (17%)
Query: 21 IDPKHLFVGPRIGEGAHAKVYEGKYK-----NQTVAIKIVHKGETPEEIAKKESRFAREV 75
ID + + IG G +V G+ K VAIK + G T K+ F E
Sbjct: 5 IDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTD----KQRRDFLSEA 60
Query: 76 AMLSRVQHRNLVKFIGA---CKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFAL 132
+++ + H N++ G CK PVM+I TE + G+L +L R V +G
Sbjct: 61 SIMGQFDHPNIIHLEGVVTKCK-PVMII-TEYMENGSLDAFLRKNDGR-FTVIQLVGMLR 117
Query: 133 DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR--EESLTEMMTAETGTY- 189
I M+ L +HRDL N+L+ +L K++DFG++R E+ T G
Sbjct: 118 GIGSGMKYLSDMSYVHRDLAARNILVNSNL-VCKVSDFGMSRVLEDDPEAAYTTRGGKIP 176
Query: 190 -RWMAPEL--------------YSTV---TLRQGEKKHYNHKNVR-----------PSAE 220
RW APE Y V + GE+ +++ N P
Sbjct: 177 IRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPM 236
Query: 221 NVPEELSIILTSCWKEDPNARPNFTQIIQML 251
+ P L ++ CW+++ + RP F QI+ ML
Sbjct: 237 DCPIALHQLMLDCWQKERSDRPKFGQIVNML 267
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 114/271 (42%), Gaps = 48/271 (17%)
Query: 21 IDPKHLFVGPRIGEGAHAKVYEGKYK-----NQTVAIKIVHKGETPEEIAKKESRFAREV 75
ID + + IG G +V G+ K VAIK + G T K+ F E
Sbjct: 11 IDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTD----KQRRDFLSEA 66
Query: 76 AMLSRVQHRNLVKFIGA---CKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFAL 132
+++ + H N++ G CK PVM+I TE + G+L +L R V +G
Sbjct: 67 SIMGQFDHPNIIHLEGVVTKCK-PVMII-TEYMENGSLDAFLRKNDGR-FTVIQLVGMLR 123
Query: 133 DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR--EESLTEMMTAETGTY- 189
I M+ L +HRDL N+L+ +L K++DFG++R E+ T G
Sbjct: 124 GIGSGMKYLSDMSYVHRDLAARNILVNSNL-VCKVSDFGMSRVLEDDPEAAYTTRGGKIP 182
Query: 190 -RWMAPEL--------------YSTV---TLRQGEKKHYNHKNVR-----------PSAE 220
RW APE Y V + GE+ +++ N P
Sbjct: 183 IRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPM 242
Query: 221 NVPEELSIILTSCWKEDPNARPNFTQIIQML 251
+ P L ++ CW+++ + RP F QI+ ML
Sbjct: 243 DCPIALHQLMLDCWQKERSDRPKFGQIVNML 273
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 120/263 (45%), Gaps = 44/263 (16%)
Query: 32 IGEGAHAKVYEGKYK---NQTVAIKIVHKGETPEEIAKK-ESRFAREVAMLSRVQHRNLV 87
+G GA +VYEG+ N +++ K PE +++ E F E ++S+ H+N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVK-TLPEVCSEQDELDFLMEALIISKFNHQNIV 97
Query: 88 KFIGACKEPV-MVIVTELLSGGTLRKYLLNMRPR-----CLDVCVAIGFALDIARAMECL 141
+ IG + + I+ EL++GG L+ +L RPR L + + A DIA + L
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 142 HSHGIIHRDLKPENLLLT--EDLKTIKLADFGLARE----------------------ES 177
+ IHRD+ N LLT + K+ DFG+A++ E+
Sbjct: 158 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEA 217
Query: 178 LTE-MMTAETGTYRW--MAPELYSTVTLRQGEKKHYNHKNVRPSA------ENVPEELSI 228
E + T++T T+ + + E++S + K + S +N P +
Sbjct: 218 FMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR 277
Query: 229 ILTSCWKEDPNARPNFTQIIQML 251
I+T CW+ P RPNF I++ +
Sbjct: 278 IMTQCWQHQPEDRPNFAIILERI 300
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 90/196 (45%), Gaps = 24/196 (12%)
Query: 31 RIGEGAHAKVYEGKYKN--QTVAIKIVHKGE--------TPEEIAKKESRFAREVAMLSR 80
++G GA+ +V K KN AIK++ K + + I K E+++L
Sbjct: 43 KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102
Query: 81 VQHRNLVKFIGACKEP-VMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAME 139
+ H N++K ++ +VTE GG L + ++N D C A I +
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK--FDECDAANIMKQILSGIC 160
Query: 140 CLHSHGIIHRDLKPENLLL--TEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPELY 197
LH H I+HRD+KPEN+LL L IK+ DFGL+ S + GT ++APE+
Sbjct: 161 YLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVL 220
Query: 198 STVTLRQGEKKHYNHK 213
KK YN K
Sbjct: 221 ---------KKKYNEK 227
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 111/259 (42%), Gaps = 46/259 (17%)
Query: 32 IGEGAHAKVYEGKYK-----NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNL 86
IG G +V G+ K + VAIK + G T K+ F E +++ + H N+
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYT----EKQRRDFLCEASIMGQFDHPNV 106
Query: 87 VKFIGACK--EPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
V G +PVM+++ E + G L +L + V +G IA M L
Sbjct: 107 VHLEGVVTRGKPVMIVI-EFMENGALDAFLRKHDGQ-FTVIQLVGMLRGIAAGMRYLADM 164
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLARE-ESLTEMMTAETGT---YRWMAPEL---- 196
G +HRDL N+L+ +L K++DFGL+R E E + TG RW APE
Sbjct: 165 GYVHRDLAARNILVNSNL-VCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYR 223
Query: 197 ----------YSTV---TLRQGEKKHYNHKNVR-----------PSAENVPEELSIILTS 232
Y V + GE+ +++ N P+ + P L ++
Sbjct: 224 KFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPAPMDCPAGLHQLMLD 283
Query: 233 CWKEDPNARPNFTQIIQML 251
CW+++ RP F QI+ +L
Sbjct: 284 CWQKERAERPKFEQIVGIL 302
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 120/275 (43%), Gaps = 63/275 (22%)
Query: 32 IGEGAHAKVYEGKYKNQT-------VAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHR 84
+GEGA KV+ + N + VA+K + + P A+K+ F RE +L+ +QH
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKAL---KDPTLAARKD--FQREAELLTNLQHE 77
Query: 85 NLVKFIGACKE-PVMVIVTELLSGGTLRKY----------LLNMRPRC----LDVCVAIG 129
++VKF G C + +++V E + G L K+ L++ +PR L + +
Sbjct: 78 HIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLH 137
Query: 130 FALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
A IA M L S +HRDL N L+ +L +K+ DFG++R+ T+ T
Sbjct: 138 IASQIASGMVYLASQHFVHRDLATRNCLVGANL-LVKIGDFGMSRDVYSTDYYRVGGHTM 196
Query: 190 ---RWMAPE--LYSTVT---------------LRQGEKKHYNHKNV-------------R 216
RWM PE +Y T G++ + N R
Sbjct: 197 LPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLER 256
Query: 217 PSAENVPEELSIILTSCWKEDPNARPNFTQIIQML 251
P P+E+ ++ CW+ +P R N +I ++L
Sbjct: 257 PRV--CPKEVYDVMLGCWQREPQQRLNIKEIYKIL 289
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 109/258 (42%), Gaps = 44/258 (17%)
Query: 32 IGEGAHAKVYEGKYK-----NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNL 86
IG G +V G+ + + VAIK + G T ++ F E +++ + H N+
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT----ERQRRDFLSEASIMGQFDHPNI 112
Query: 87 VKFIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
++ G + + +IVTE + G+L +L + + +G + M L G
Sbjct: 113 IRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQ-FTIMQLVGMLRGVGAGMRYLSDLG 171
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAR--EESLTEMMTAETGTY--RWMAPELYSTVT 201
+HRDL N+L+ +L K++DFGL+R E+ T G RW APE + T
Sbjct: 172 YVHRDLAARNVLVDSNL-VCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRT 230
Query: 202 -----------------LRQGEKKHYNHKNVR-----------PSAENVPEELSIILTSC 233
L GE+ ++N N P+ P L ++ C
Sbjct: 231 FSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLMLDC 290
Query: 234 WKEDPNARPNFTQIIQML 251
W +D RP F+QI+ +L
Sbjct: 291 WHKDRAQRPRFSQIVSVL 308
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 115/276 (41%), Gaps = 54/276 (19%)
Query: 32 IGEGAHAKVYEGKYK-----NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNL 86
IG G +V G K VAIK + G T K+ F E +++ + H N+
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYT----EKQRRDFLSEASIMGQFDHPNV 70
Query: 87 VKFIGACKE--PVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
+ G + PVM+I TE + G+L +L + V +G IA M+ L
Sbjct: 71 IHLEGVVTKSTPVMII-TEFMENGSLDSFLRQNDGQ-FTVIQLVGMLRGIAAGMKYLADM 128
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLAR---EESLTEMMTAETGT---YRWMAPEL-- 196
+HR L N+L+ +L K++DFGL+R +++ T+ G RW APE
Sbjct: 129 NYVHRALAARNILVNSNL-VCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQ 187
Query: 197 ------------YSTV---TLRQGEKKHYNHKNVR-----------PSAENVPEELSIIL 230
Y V + GE+ +++ N P + P L ++
Sbjct: 188 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQLM 247
Query: 231 TSCWKEDPNARPNFTQIIQMLL------NYLSAIAP 260
CW++D N RP F QI+ L N L A+AP
Sbjct: 248 LDCWQKDRNHRPKFGQIVNTLDKMIRNPNSLKAMAP 283
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 109/258 (42%), Gaps = 44/258 (17%)
Query: 32 IGEGAHAKVYEGKYK-----NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNL 86
IG G +V G+ + + VAIK + G T ++ F E +++ + H N+
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT----ERQRRDFLSEASIMGQFDHPNI 112
Query: 87 VKFIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
++ G + + +IVTE + G+L +L + + +G + M L G
Sbjct: 113 IRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQ-FTIMQLVGMLRGVGAGMRYLSDLG 171
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAR--EESLTEMMTAETGTY--RWMAPELYSTVT 201
+HRDL N+L+ +L K++DFGL+R E+ T G RW APE + T
Sbjct: 172 YVHRDLAARNVLVDSNL-VCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRT 230
Query: 202 -----------------LRQGEKKHYNHKNVR-----------PSAENVPEELSIILTSC 233
L GE+ ++N N P+ P L ++ C
Sbjct: 231 FSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLMLDC 290
Query: 234 WKEDPNARPNFTQIIQML 251
W +D RP F+QI+ +L
Sbjct: 291 WHKDRAQRPRFSQIVSVL 308
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 93/172 (54%), Gaps = 14/172 (8%)
Query: 32 IGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAR----EVAMLSRVQHRNLV 87
+G+G + VY G+ + V I I +EI +++SR+++ E+A+ ++H+N+V
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAI-------KEIPERDSRYSQPLHEEIALHKHLKHKNIV 82
Query: 88 KFIGACKEPVMV-IVTELLSGGTLRKYLLNMRPRCLDVCVAIGF-ALDIARAMECLHSHG 145
+++G+ E + I E + GG+L L + D IGF I ++ LH +
Sbjct: 83 QYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ 142
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLA-REESLTEMMTAETGTYRWMAPEL 196
I+HRD+K +N+L+ +K++DFG + R + TGT ++MAPE+
Sbjct: 143 IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEI 194
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 93/172 (54%), Gaps = 14/172 (8%)
Query: 32 IGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAR----EVAMLSRVQHRNLV 87
+G+G + VY G+ + V I I +EI +++SR+++ E+A+ ++H+N+V
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAI-------KEIPERDSRYSQPLHEEIALHKHLKHKNIV 68
Query: 88 KFIGACKEPVMV-IVTELLSGGTLRKYLLNMRPRCLDVCVAIGFAL-DIARAMECLHSHG 145
+++G+ E + I E + GG+L L + D IGF I ++ LH +
Sbjct: 69 QYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ 128
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLA-REESLTEMMTAETGTYRWMAPEL 196
I+HRD+K +N+L+ +K++DFG + R + TGT ++MAPE+
Sbjct: 129 IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEI 180
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 112/267 (41%), Gaps = 51/267 (19%)
Query: 32 IGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESR-FAREVAMLSRVQHR-NLVKF 89
IGEG +V + + K + + K E +K + R FA E+ +L ++ H N++
Sbjct: 33 IGEGNFGQVLKARIKKDGLRMDAAIK-RMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 91
Query: 90 IGACKE-PVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIG--------------FALDI 134
+GAC+ + + E G L +L R D AI FA D+
Sbjct: 92 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 151
Query: 135 ARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAP 194
AR M+ L IHRDL N+L+ E+ K+ADFGL+R + + T RWMA
Sbjct: 152 ARGMDYLSQKQFIHRDLAARNILVGENY-VAKIADFGLSRGQEVYVKKTMGRLPVRWMAI 210
Query: 195 E-------------------LYSTVTLRQG-----------EKKHYNHKNVRPSAENVPE 224
E L+ V+L EK ++ +P N +
Sbjct: 211 ESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPL--NCDD 268
Query: 225 ELSIILTSCWKEDPNARPNFTQIIQML 251
E+ ++ CW+E P RP+F QI+ L
Sbjct: 269 EVYDLMRQCWREKPYERPSFAQILVSL 295
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 112/267 (41%), Gaps = 51/267 (19%)
Query: 32 IGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESR-FAREVAMLSRVQHR-NLVKF 89
IGEG +V + + K + + K E +K + R FA E+ +L ++ H N++
Sbjct: 23 IGEGNFGQVLKARIKKDGLRMDAAIK-RMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 81
Query: 90 IGACKE-PVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIG--------------FALDI 134
+GAC+ + + E G L +L R D AI FA D+
Sbjct: 82 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 141
Query: 135 ARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAP 194
AR M+ L IHRDL N+L+ E+ K+ADFGL+R + + T RWMA
Sbjct: 142 ARGMDYLSQKQFIHRDLAARNILVGENY-VAKIADFGLSRGQEVYVKKTMGRLPVRWMAI 200
Query: 195 E-------------------LYSTVTLRQG-----------EKKHYNHKNVRPSAENVPE 224
E L+ V+L EK ++ +P N +
Sbjct: 201 ESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPL--NCDD 258
Query: 225 ELSIILTSCWKEDPNARPNFTQIIQML 251
E+ ++ CW+E P RP+F QI+ L
Sbjct: 259 EVYDLMRQCWREKPYERPSFAQILVSL 285
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 91/179 (50%), Gaps = 21/179 (11%)
Query: 29 GPRIGEGAHAKVYEGKYKNQTVAIKIVHK--GETPEEIAKKESRFAREVAMLSRVQHRNL 86
G ++GEG VY+G N TVA+K + T EE+ + +F +E+ ++++ QH NL
Sbjct: 36 GNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQ---QFDQEIKVMAKCQHENL 92
Query: 87 VKFIGACKE-PVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGF------ALDIARAME 139
V+ +G + + +V + G+L R CLD + + A A +
Sbjct: 93 VELLGFSSDGDDLCLVYVYMPNGSLLD-----RLSCLDGTPPLSWHMRCKIAQGAANGIN 147
Query: 140 CLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREE---SLTEMMTAETGTYRWMAPE 195
LH + IHRD+K N+LL E T K++DFGLAR + T M + GT +MAPE
Sbjct: 148 FLHENHHIHRDIKSANILLDEAF-TAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPE 205
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 98/181 (54%), Gaps = 13/181 (7%)
Query: 21 IDPKHLFVG-PRIGEGAHAKVYEG--KYKNQTVAIKIVHKGETPEEIAKKESRFAREVAM 77
+DP+ LF RIG+G+ +VY+G + + VAIKI+ E +EI + +E+ +
Sbjct: 15 VDPEELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQ----QEITV 70
Query: 78 LSRVQHRNLVKFIGA-CKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
LS+ + ++ G+ K + I+ E L GG+ L +P L+ +I +
Sbjct: 71 LSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLL---KPGPLEETYIATILREILK 127
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEM-MTAETGTYRWMAPE 195
++ LHS IHRD+K N+LL+E +KLADFG+A + + T++ GT WMAPE
Sbjct: 128 GLDYLHSERKIHRDIKAANVLLSEQ-GDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPE 186
Query: 196 L 196
+
Sbjct: 187 V 187
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 118/292 (40%), Gaps = 56/292 (19%)
Query: 12 ELKLDAKWLIDPKHLFVGPRIGEGAHAKVYEGK---YKNQTVAIKIVHKGETPEEIAKKE 68
+L + KW +L G +G GA KV E + +K+ K A ++
Sbjct: 34 QLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK 93
Query: 69 SRFAREVAMLSRV-QHRNLVKFIGACKE--PVMVIVTELLSGGTLRKYLLNMRPRCL--D 123
E+ ++S + QH N+V +GAC PV+VI TE G L +L + R L D
Sbjct: 94 EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVI-TEYCCYGDLLNFL-RRKSRVLETD 151
Query: 124 VCVAIG-----------FALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGL 172
AI F+ +A+ M L S IHRD+ N+LLT K+ DFGL
Sbjct: 152 PAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNG-HVAKIGDFGL 210
Query: 173 AREESLTEMMTAETGTYR----WMAPE-LYSTVTLRQGEKKHYN---------------- 211
AR + + + G R WMAPE ++ V Q + Y
Sbjct: 211 AR-DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 269
Query: 212 -------HKNVRPSAEN-----VPEELSIILTSCWKEDPNARPNFTQIIQML 251
+K V+ + P+ + I+ +CW +P RP F QI L
Sbjct: 270 ILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFL 321
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 118/292 (40%), Gaps = 56/292 (19%)
Query: 12 ELKLDAKWLIDPKHLFVGPRIGEGAHAKVYEGK---YKNQTVAIKIVHKGETPEEIAKKE 68
+L + KW +L G +G GA KV E + +K+ K A ++
Sbjct: 34 QLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK 93
Query: 69 SRFAREVAMLSRV-QHRNLVKFIGACKE--PVMVIVTELLSGGTLRKYLLNMRPRCL--D 123
E+ ++S + QH N+V +GAC PV+VI TE G L +L + R L D
Sbjct: 94 EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVI-TEYCCYGDLLNFL-RRKSRVLETD 151
Query: 124 VCVAIG-----------FALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGL 172
AI F+ +A+ M L S IHRD+ N+LLT K+ DFGL
Sbjct: 152 PAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNG-HVAKIGDFGL 210
Query: 173 AREESLTEMMTAETGTYR----WMAPE-LYSTVTLRQGEKKHYN---------------- 211
AR + + + G R WMAPE ++ V Q + Y
Sbjct: 211 AR-DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 269
Query: 212 -------HKNVRPSAEN-----VPEELSIILTSCWKEDPNARPNFTQIIQML 251
+K V+ + P+ + I+ +CW +P RP F QI L
Sbjct: 270 ILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFL 321
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 119/289 (41%), Gaps = 54/289 (18%)
Query: 12 ELKLDAKWLIDPKHLFVGPRIGEGAHAKVYEGK---YKNQTVAIKIVHKGETPEEIAKKE 68
+L + KW +L G +G GA KV E + +K+ K A ++
Sbjct: 26 QLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK 85
Query: 69 SRFAREVAMLSRV-QHRNLVKFIGACKE--PVMVIVTELLSGGTLRKYLL---------- 115
E+ ++S + QH N+V +GAC PV+VI TE G L +L
Sbjct: 86 EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVI-TEYCCYGDLLNFLRRKAEADLDKE 144
Query: 116 NMRPRCLDVCVAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLARE 175
+ RP L++ + F+ +A+ M L S IHRD+ N+LLT K+ DFGLAR
Sbjct: 145 DGRP--LELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNG-HVAKIGDFGLAR- 200
Query: 176 ESLTEMMTAETGTYR----WMAPE-LYSTVTLRQGEKKHYN------------------- 211
+ + + G R WMAPE ++ V Q + Y
Sbjct: 201 DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILV 260
Query: 212 ----HKNVRPSAEN-----VPEELSIILTSCWKEDPNARPNFTQIIQML 251
+K V+ + P+ + I+ +CW +P RP F QI L
Sbjct: 261 NSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFL 309
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 119/289 (41%), Gaps = 54/289 (18%)
Query: 12 ELKLDAKWLIDPKHLFVGPRIGEGAHAKVYEGK---YKNQTVAIKIVHKGETPEEIAKKE 68
+L + KW +L G +G GA KV E + +K+ K A ++
Sbjct: 34 QLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK 93
Query: 69 SRFAREVAMLSRV-QHRNLVKFIGACKE--PVMVIVTELLSGGTLRKYLL---------- 115
E+ ++S + QH N+V +GAC PV+VI TE G L +L
Sbjct: 94 EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVI-TEYCCYGDLLNFLRRKAEADLDKE 152
Query: 116 NMRPRCLDVCVAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLARE 175
+ RP L++ + F+ +A+ M L S IHRD+ N+LLT K+ DFGLAR
Sbjct: 153 DGRP--LELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNG-HVAKIGDFGLAR- 208
Query: 176 ESLTEMMTAETGTYR----WMAPE-LYSTVTLRQGEKKHYN------------------- 211
+ + + G R WMAPE ++ V Q + Y
Sbjct: 209 DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILV 268
Query: 212 ----HKNVRPSAEN-----VPEELSIILTSCWKEDPNARPNFTQIIQML 251
+K V+ + P+ + I+ +CW +P RP F QI L
Sbjct: 269 NSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFL 317
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 90/179 (50%), Gaps = 21/179 (11%)
Query: 29 GPRIGEGAHAKVYEGKYKNQTVAIKIVHK--GETPEEIAKKESRFAREVAMLSRVQHRNL 86
G ++GEG VY+G N TVA+K + T EE+ + +F +E+ ++++ QH NL
Sbjct: 36 GNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQ---QFDQEIKVMAKCQHENL 92
Query: 87 VKFIGACKE-PVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGF------ALDIARAME 139
V+ +G + + +V + G+L R CLD + + A A +
Sbjct: 93 VELLGFSSDGDDLCLVYVYMPNGSLLD-----RLSCLDGTPPLSWHMRCKIAQGAANGIN 147
Query: 140 CLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREE---SLTEMMTAETGTYRWMAPE 195
LH + IHRD+K N+LL E T K++DFGLAR + T M GT +MAPE
Sbjct: 148 FLHENHHIHRDIKSANILLDEAF-TAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPE 205
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 125/261 (47%), Gaps = 40/261 (15%)
Query: 21 IDPKHLFVG-PRIGEGAHAKVYEG--KYKNQTVAIKIVHKGETPEEIAKKESRFAREVAM 77
+DP+ LF +IG+G+ +V++G + VAIKI+ E +EI + +E+ +
Sbjct: 23 MDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ----QEITV 78
Query: 78 LSRVQHRNLVKFIGA-CKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
LS+ + K+ G+ K+ + I+ E L GG+ L P LD +I +
Sbjct: 79 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATILREILK 135
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMM-TAETGTYRWMAPE 195
++ LHS IHRD+K N+LL+E +KLADFG+A + + T++ GT WMAPE
Sbjct: 136 GLDYLHSEKKIHRDIKAANVLLSEH-GEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPE 194
Query: 196 L----------------YSTVTLRQGEKKHYN----------HKNVRPSAE-NVPEELSI 228
+ + + L +GE H KN P+ E N + L
Sbjct: 195 VIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKE 254
Query: 229 ILTSCWKEDPNARPNFTQIIQ 249
+ +C ++P+ RP ++++
Sbjct: 255 FVEACLNKEPSFRPTAKELLK 275
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 125/261 (47%), Gaps = 40/261 (15%)
Query: 21 IDPKHLFVG-PRIGEGAHAKVYEG--KYKNQTVAIKIVHKGETPEEIAKKESRFAREVAM 77
+DP+ LF +IG+G+ +V++G + VAIKI+ E +EI + +E+ +
Sbjct: 3 LDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ----QEITV 58
Query: 78 LSRVQHRNLVKFIGA-CKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
LS+ + K+ G+ K+ + I+ E L GG+ L P LD +I +
Sbjct: 59 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATILREILK 115
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMM-TAETGTYRWMAPE 195
++ LHS IHRD+K N+LL+E +KLADFG+A + + T++ GT WMAPE
Sbjct: 116 GLDYLHSEKKIHRDIKAANVLLSEH-GEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPE 174
Query: 196 L----------------YSTVTLRQGEKKHYN----------HKNVRPSAE-NVPEELSI 228
+ + + L +GE H KN P+ E N + L
Sbjct: 175 VIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKE 234
Query: 229 ILTSCWKEDPNARPNFTQIIQ 249
+ +C ++P+ RP ++++
Sbjct: 235 FVEACLNKEPSFRPTAKELLK 255
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 87/169 (51%), Gaps = 10/169 (5%)
Query: 32 IGEGAHAKVYEGKYKN--QTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+GEG++ V + + K+ + VAIK + + + + K RE+ +L +++H NLV
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIA---MREIKLLKQLRHENLVNL 89
Query: 90 IGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
+ CK+ +V E + L L + P LD V + I + HSH IIH
Sbjct: 90 LEVCKKKKRWYLVFEFVDHTILDD--LELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIH 147
Query: 149 RDLKPENLLLTEDLKTIKLADFGLAREESL-TEMMTAETGTYRWMAPEL 196
RD+KPEN+L+++ +KL DFG AR + E+ E T + APEL
Sbjct: 148 RDIKPENILVSQS-GVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPEL 195
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 125/261 (47%), Gaps = 40/261 (15%)
Query: 21 IDPKHLFVG-PRIGEGAHAKVYEG--KYKNQTVAIKIVHKGETPEEIAKKESRFAREVAM 77
+DP+ LF +IG+G+ +V++G + VAIKI+ E +EI + +E+ +
Sbjct: 3 LDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ----QEITV 58
Query: 78 LSRVQHRNLVKFIGA-CKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
LS+ + K+ G+ K+ + I+ E L GG+ L P LD +I +
Sbjct: 59 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATILREILK 115
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAE-TGTYRWMAPE 195
++ LHS IHRD+K N+LL+E +KLADFG+A + + T++ GT WMAPE
Sbjct: 116 GLDYLHSEKKIHRDIKAANVLLSEH-GEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPE 174
Query: 196 L----------------YSTVTLRQGEKKHYN----------HKNVRPSAE-NVPEELSI 228
+ + + L +GE H KN P+ E N + L
Sbjct: 175 VIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKE 234
Query: 229 ILTSCWKEDPNARPNFTQIIQ 249
+ +C ++P+ RP ++++
Sbjct: 235 FVEACLNKEPSFRPTAKELLK 255
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 90/179 (50%), Gaps = 18/179 (10%)
Query: 28 VGPRI-----GEGAHAKV-YEGKYKNQT-VAIKIVHKGETPEEIAKKES---RFAREVAM 77
+GP I GEG+ KV YK Q VA+K + + ++ KK R RE++
Sbjct: 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISR-----QLLKKSDMHMRVEREISY 62
Query: 78 LSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARA 137
L ++H +++K P +++ +GG L Y++ + D F I A
Sbjct: 63 LKLLRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDE--GRRFFQQIICA 120
Query: 138 MECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+E H H I+HRDLKPENLLL ++L +K+ADFGL+ + + G+ + APE+
Sbjct: 121 IEYCHRHKIVHRDLKPENLLLDDNL-NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEV 178
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 7/169 (4%)
Query: 32 IGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+GEG+ KV + Q VA+KI++K + + + R RE++ L ++H +++K
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAK--SDMQGRIEREISYLRLLRHPHIIKL 69
Query: 90 IGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIHR 149
K +I+ +G L Y++ + A F I A+E H H I+HR
Sbjct: 70 YDVIKSKDEIIMVIEYAGNELFDYIVQRDK--MSEQEARRFFQQIISAVEYCHRHKIVHR 127
Query: 150 DLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPELYS 198
DLKPENLLL E L +K+ADFGL+ + + G+ + APE+ S
Sbjct: 128 DLKPENLLLDEHL-NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVIS 175
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 7/169 (4%)
Query: 32 IGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+GEG+ KV + Q VA+KI++K + + + R RE++ L ++H +++K
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAK--SDMQGRIEREISYLRLLRHPHIIKL 78
Query: 90 IGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIHR 149
K +I+ +G L Y++ + A F I A+E H H I+HR
Sbjct: 79 YDVIKSKDEIIMVIEYAGNELFDYIVQRDK--MSEQEARRFFQQIISAVEYCHRHKIVHR 136
Query: 150 DLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPELYS 198
DLKPENLLL E L +K+ADFGL+ + + G+ + APE+ S
Sbjct: 137 DLKPENLLLDEHL-NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVIS 184
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 124/260 (47%), Gaps = 40/260 (15%)
Query: 22 DPKHLFVG-PRIGEGAHAKVYEG--KYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
DP+ LF +IG+G+ +V++G + VAIKI+ E +EI + +E+ +L
Sbjct: 19 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ----QEITVL 74
Query: 79 SRVQHRNLVKFIGA-CKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARA 137
S+ + K+ G+ K+ + I+ E L GG+ L P LD +I +
Sbjct: 75 SQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATILREILKG 131
Query: 138 MECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAE-TGTYRWMAPEL 196
++ LHS IHRD+K N+LL+E +KLADFG+A + + T++ GT WMAPE+
Sbjct: 132 LDYLHSEKKIHRDIKAANVLLSEH-GEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEV 190
Query: 197 ----------------YSTVTLRQGEKKHYN----------HKNVRPSAE-NVPEELSII 229
+ + L +GE H KN P+ E N + L
Sbjct: 191 IKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEF 250
Query: 230 LTSCWKEDPNARPNFTQIIQ 249
+ +C ++P+ RP ++++
Sbjct: 251 VEACLNKEPSFRPTAKELLK 270
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 88/169 (52%), Gaps = 7/169 (4%)
Query: 32 IGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+GEG+ KV + Q VA+KI++K + + + R RE++ L ++H +++K
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAK--SDMQGRIEREISYLRLLRHPHIIKL 73
Query: 90 IGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIHR 149
K +I+ +G L Y++ R + + A F I A+E H H I+HR
Sbjct: 74 YDVIKSKDEIIMVIEYAGNELFDYIVQ-RDK-MSEQEARRFFQQIISAVEYCHRHKIVHR 131
Query: 150 DLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPELYS 198
DLKPENLLL E L +K+ADFGL+ + + G+ + APE+ S
Sbjct: 132 DLKPENLLLDEHL-NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVIS 179
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 88/169 (52%), Gaps = 7/169 (4%)
Query: 32 IGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+GEG+ KV + Q VA+KI++K + + + R RE++ L ++H +++K
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAK--SDMQGRIEREISYLRLLRHPHIIKL 79
Query: 90 IGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIHR 149
K +I+ +G L Y++ R + + A F I A+E H H I+HR
Sbjct: 80 YDVIKSKDEIIMVIEYAGNELFDYIVQ-RDK-MSEQEARRFFQQIISAVEYCHRHKIVHR 137
Query: 150 DLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPELYS 198
DLKPENLLL E L +K+ADFGL+ + + G+ + APE+ S
Sbjct: 138 DLKPENLLLDEHL-NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVIS 185
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 85/176 (48%), Gaps = 13/176 (7%)
Query: 32 IGEGAHAKVYEGK--YKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQ---HRNL 86
IG GA+ VY+ + + VA+K V REVA+L R++ H N+
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNV 76
Query: 87 VKFIGAC------KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMEC 140
V+ + C +E + +V E + LR YL P L R ++
Sbjct: 77 VRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDF 135
Query: 141 LHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
LH++ I+HRDLKPEN+L+T T+KLADFGLAR S +T T + APE+
Sbjct: 136 LHANCIVHRDLKPENILVTSG-GTVKLADFGLARIYSYQMALTPVVVTLWYRAPEV 190
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 112/267 (41%), Gaps = 51/267 (19%)
Query: 32 IGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESR-FAREVAMLSRVQHR-NLVKF 89
IGEG +V + + K + + K E +K + R FA E+ +L ++ H N++
Sbjct: 30 IGEGNFGQVLKARIKKDGLRMDAAIK-RMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 88
Query: 90 IGACKE-PVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIG--------------FALDI 134
+GAC+ + + E G L +L R D AI FA D+
Sbjct: 89 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 148
Query: 135 ARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAP 194
AR M+ L IHR+L N+L+ E+ K+ADFGL+R + + T RWMA
Sbjct: 149 ARGMDYLSQKQFIHRNLAARNILVGENY-VAKIADFGLSRGQEVYVKKTMGRLPVRWMAI 207
Query: 195 E-------------------LYSTVTLRQG-----------EKKHYNHKNVRPSAENVPE 224
E L+ V+L EK ++ +P N +
Sbjct: 208 ESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPL--NCDD 265
Query: 225 ELSIILTSCWKEDPNARPNFTQIIQML 251
E+ ++ CW+E P RP+F QI+ L
Sbjct: 266 EVYDLMRQCWREKPYERPSFAQILVSL 292
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 90/179 (50%), Gaps = 21/179 (11%)
Query: 29 GPRIGEGAHAKVYEGKYKNQTVAIKIVHK--GETPEEIAKKESRFAREVAMLSRVQHRNL 86
G ++GEG VY+G N TVA+K + T EE+ + +F +E+ ++++ QH NL
Sbjct: 30 GNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQ---QFDQEIKVMAKCQHENL 86
Query: 87 VKFIGACKE-PVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGF------ALDIARAME 139
V+ +G + + +V + G+L R CLD + + A A +
Sbjct: 87 VELLGFSSDGDDLCLVYVYMPNGSLLD-----RLSCLDGTPPLSWHMRCKIAQGAANGIN 141
Query: 140 CLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR-EESLTE--MMTAETGTYRWMAPE 195
LH + IHRD+K N+LL E T K++DFGLAR E + M GT +MAPE
Sbjct: 142 FLHENHHIHRDIKSANILLDEAF-TAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPE 199
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 95/182 (52%), Gaps = 13/182 (7%)
Query: 20 LIDPKHLFVG-PRIGEGAHAKVYEG--KYKNQTVAIKIVHKGETPEEIAKKESRFAREVA 76
+ DP+ LF RIG+G+ +V++G Q VAIKI+ E +EI + +E+
Sbjct: 18 IADPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQ----QEIT 73
Query: 77 MLSRVQHRNLVKFIGA-CKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIA 135
+LS+ + K+ G+ K + I+ E L GG+ L R D +I
Sbjct: 74 VLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLL---RAGPFDEFQIATMLKEIL 130
Query: 136 RAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMM-TAETGTYRWMAP 194
+ ++ LHS IHRD+K N+LL+E +KLADFG+A + + T++ GT WMAP
Sbjct: 131 KGLDYLHSEKKIHRDIKAANVLLSEQ-GDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAP 189
Query: 195 EL 196
E+
Sbjct: 190 EV 191
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 124/280 (44%), Gaps = 57/280 (20%)
Query: 21 IDPKHLFVGPRIGEGAHAKVYEGKY---KNQTVAIKIVHKGETPEEIAKKESRFAREVAM 77
+ +HL ++G+G V +Y ++ T + V K + E ++ F RE+ +
Sbjct: 10 FEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEI 67
Query: 78 LSRVQHRNLVKFIGACKEP---VMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDI 134
L +QH N+VK+ G C + ++ E L G+LR+YL + R +D + + I
Sbjct: 68 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKER-IDHIKLLQYTSQI 126
Query: 135 ARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR-------------------- 174
+ ME L + IHRDL N+L+ E+ +K+ DFGL +
Sbjct: 127 CKGMEYLGTKRYIHRDLATRNILV-ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 185
Query: 175 ---EESLTE---MMTAETGTYRWMAPELYSTV---------------TLRQGEKKHYN-- 211
ESLTE + ++ ++ + EL++ + +QG+ ++
Sbjct: 186 WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 245
Query: 212 ---HKNVR-PSAENVPEELSIILTSCWKEDPNARPNFTQI 247
N R P + P+E+ +I+T CW + N RP+F +
Sbjct: 246 ELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 285
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 130/296 (43%), Gaps = 60/296 (20%)
Query: 21 IDPKHLFVGPRIGEGAHAKVYEGKY---KNQTVAIKIVHKGETPEEIAKKESRFAREVAM 77
+ +HL ++G+G V +Y ++ T + V K + E ++ F RE+ +
Sbjct: 11 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEI 68
Query: 78 LSRVQHRNLVKFIGACKEP---VMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDI 134
L +QH N+VK+ G C + ++ E L G+LR YL + R +D + + I
Sbjct: 69 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQI 127
Query: 135 ARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR-------------------- 174
+ ME L + IHRDL N+L+ E+ +K+ DFGL +
Sbjct: 128 CKGMEYLGTKRYIHRDLATRNILV-ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 186
Query: 175 ---EESLTE---MMTAETGTYRWMAPELYSTV---------------TLRQGEKKHYN-- 211
ESLTE + ++ ++ + EL++ + +QG+ ++
Sbjct: 187 WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 246
Query: 212 ---HKNVR-PSAENVPEELSIILTSCWKEDPNARPNFTQI---IQMLLNYLSAIAP 260
N R P + P+E+ +I+T CW + N RP+F + + + + ++ + P
Sbjct: 247 ELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAGLVP 302
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 124/311 (39%), Gaps = 65/311 (20%)
Query: 3 SRSRFYLAD--ELKLDAKWLIDPKHLFVGPRIGEGAHAKVYEGK---YKNQTVAIKIVHK 57
S + ++ D E + D KW ++L G +G GA KV V+I++ K
Sbjct: 22 SDNEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVK 81
Query: 58 GETPEEIAKKESRFAREVAMLSRV-QHRNLVKFIGAC--KEPVMVIVTELLSGGTLRKYL 114
+ + + E+ M++++ H N+V +GAC P+ +I E G L YL
Sbjct: 82 MLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIF-EYCCYGDLLNYL 140
Query: 115 LNMRPRC------------------LDVCV---AIGFALDIARAMECLHSHGIIHRDLKP 153
+ R + L+V + FA +A+ ME L +HRDL
Sbjct: 141 RSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAA 200
Query: 154 ENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYR----WMAPE-LYSTVTLRQGEKK 208
N+L+T K +K+ DFGLAR + +++ G R WMAPE L+ + + +
Sbjct: 201 RNVLVTHG-KVVKICDFGLAR-DIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVW 258
Query: 209 HYN-------------------HKNVRPSAEN---------VPEELSIILTSCWKEDPNA 240
Y N +N EE+ II+ SCW D
Sbjct: 259 SYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRK 318
Query: 241 RPNFTQIIQML 251
RP+F + L
Sbjct: 319 RPSFPNLTSFL 329
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 123/280 (43%), Gaps = 57/280 (20%)
Query: 21 IDPKHLFVGPRIGEGAHAKVYEGKY---KNQTVAIKIVHKGETPEEIAKKESRFAREVAM 77
+ +HL ++G+G V +Y ++ T + V K + E ++ F RE+ +
Sbjct: 5 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEI 62
Query: 78 LSRVQHRNLVKFIGACKEP---VMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDI 134
L +QH N+VK+ G C + ++ E L G+LR YL + R +D + + I
Sbjct: 63 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQI 121
Query: 135 ARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR-------------------- 174
+ ME L + IHRDL N+L+ E+ +K+ DFGL +
Sbjct: 122 CKGMEYLGTKRYIHRDLATRNILV-ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 180
Query: 175 ---EESLTE---MMTAETGTYRWMAPELYSTV---------------TLRQGEKKHYN-- 211
ESLTE + ++ ++ + EL++ + +QG+ ++
Sbjct: 181 WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 240
Query: 212 ---HKNVR-PSAENVPEELSIILTSCWKEDPNARPNFTQI 247
N R P + P+E+ +I+T CW + N RP+F +
Sbjct: 241 ELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 280
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 123/280 (43%), Gaps = 57/280 (20%)
Query: 21 IDPKHLFVGPRIGEGAHAKVYEGKY---KNQTVAIKIVHKGETPEEIAKKESRFAREVAM 77
+ +HL ++G+G V +Y ++ T + V K + E ++ F RE+ +
Sbjct: 38 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEI 95
Query: 78 LSRVQHRNLVKFIGACKEP---VMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDI 134
L +QH N+VK+ G C + ++ E L G+LR YL + R +D + + I
Sbjct: 96 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQI 154
Query: 135 ARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR-------------------- 174
+ ME L + IHRDL N+L+ E+ +K+ DFGL +
Sbjct: 155 CKGMEYLGTKRYIHRDLATRNILV-ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 213
Query: 175 ---EESLTE---MMTAETGTYRWMAPELYSTV---------------TLRQGEKKHYN-- 211
ESLTE + ++ ++ + EL++ + +QG+ ++
Sbjct: 214 WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 273
Query: 212 ---HKNVR-PSAENVPEELSIILTSCWKEDPNARPNFTQI 247
N R P + P+E+ +I+T CW + N RP+F +
Sbjct: 274 ELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 313
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 123/280 (43%), Gaps = 57/280 (20%)
Query: 21 IDPKHLFVGPRIGEGAHAKVYEGKY---KNQTVAIKIVHKGETPEEIAKKESRFAREVAM 77
+ +HL ++G+G V +Y ++ T + V K + E ++ F RE+ +
Sbjct: 6 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEI 63
Query: 78 LSRVQHRNLVKFIGACKEP---VMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDI 134
L +QH N+VK+ G C + ++ E L G+LR YL + R +D + + I
Sbjct: 64 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQI 122
Query: 135 ARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR-------------------- 174
+ ME L + IHRDL N+L+ E+ +K+ DFGL +
Sbjct: 123 CKGMEYLGTKRYIHRDLATRNILV-ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 181
Query: 175 ---EESLTE---MMTAETGTYRWMAPELYSTV---------------TLRQGEKKHYN-- 211
ESLTE + ++ ++ + EL++ + +QG+ ++
Sbjct: 182 WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 241
Query: 212 ---HKNVR-PSAENVPEELSIILTSCWKEDPNARPNFTQI 247
N R P + P+E+ +I+T CW + N RP+F +
Sbjct: 242 ELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 281
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 118/280 (42%), Gaps = 57/280 (20%)
Query: 21 IDPKHLFVGPRIGEGAHAKVYEGKY---KNQTVAIKIVHKGETPEEIAKKESRFAREVAM 77
+ +HL ++G+G V +Y ++ T + V K + E ++ F RE+ +
Sbjct: 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEI 64
Query: 78 LSRVQHRNLVKFIGACKEP---VMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDI 134
L +QH N+VK+ G C + ++ E L G+LR YL + R +D + + I
Sbjct: 65 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQI 123
Query: 135 ARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR----EESLTEMMTAETGTYR 190
+ ME L + IHRDL N+L+ E+ +K+ DFGL + ++ ++
Sbjct: 124 CKGMEYLGTKRYIHRDLATRNILV-ENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIF 182
Query: 191 WMAPE-------------------LYSTVTL------------------RQGEKKHYN-- 211
W APE LY T +QG+ ++
Sbjct: 183 WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 242
Query: 212 ---HKNVR-PSAENVPEELSIILTSCWKEDPNARPNFTQI 247
N R P + P+E+ +I+T CW + N RP+F +
Sbjct: 243 ELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 282
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 123/280 (43%), Gaps = 57/280 (20%)
Query: 21 IDPKHLFVGPRIGEGAHAKVYEGKY---KNQTVAIKIVHKGETPEEIAKKESRFAREVAM 77
+ +HL ++G+G V +Y ++ T + V K + E ++ F RE+ +
Sbjct: 14 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEI 71
Query: 78 LSRVQHRNLVKFIGACKEPV---MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDI 134
L +QH N+VK+ G C + ++ E L G+LR YL + R +D + + I
Sbjct: 72 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQI 130
Query: 135 ARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR-------------------- 174
+ ME L + IHRDL N+L+ E+ +K+ DFGL +
Sbjct: 131 CKGMEYLGTKRYIHRDLATRNILV-ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 189
Query: 175 ---EESLTE---MMTAETGTYRWMAPELYSTV---------------TLRQGEKKHYN-- 211
ESLTE + ++ ++ + EL++ + +QG+ ++
Sbjct: 190 WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 249
Query: 212 ---HKNVR-PSAENVPEELSIILTSCWKEDPNARPNFTQI 247
N R P + P+E+ +I+T CW + N RP+F +
Sbjct: 250 ELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 289
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 114/267 (42%), Gaps = 46/267 (17%)
Query: 32 IGEGAHAKVYEGKYKNQT-----VAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNL 86
IG+G VY G+Y +Q AIK + + +++ F RE ++ + H N+
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEA----FLREGLLMRGLNHPNV 84
Query: 87 VKFIGACKEPVMV--IVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
+ IG P + ++ + G L +++ + + R V I F L +AR ME L
Sbjct: 85 LALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQ-RNPTVKDLISFGLQVARGMEYLAEQ 143
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY-----RWMAPELYST 199
+HRDL N +L E T+K+ADFGLAR+ E + + + +W A E T
Sbjct: 144 KFVHRDLAARNCMLDESF-TVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQT 202
Query: 200 V-----------------TLRQG----------EKKHYNHKNVR-PSAENVPEELSIILT 231
L +G + H+ + R P E P+ L ++
Sbjct: 203 YRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPDSLYQVMQ 262
Query: 232 SCWKEDPNARPNFTQIIQMLLNYLSAI 258
CW+ DP RP F ++ + +SA+
Sbjct: 263 QCWEADPAVRPTFRVLVGEVEQIVSAL 289
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 123/280 (43%), Gaps = 57/280 (20%)
Query: 21 IDPKHLFVGPRIGEGAHAKVYEGKY---KNQTVAIKIVHKGETPEEIAKKESRFAREVAM 77
+ +HL ++G+G V +Y ++ T + V K + E ++ F RE+ +
Sbjct: 12 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEI 69
Query: 78 LSRVQHRNLVKFIGACKEP---VMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDI 134
L +QH N+VK+ G C + ++ E L G+LR YL + R +D + + I
Sbjct: 70 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQI 128
Query: 135 ARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR-------------------- 174
+ ME L + IHRDL N+L+ E+ +K+ DFGL +
Sbjct: 129 CKGMEYLGTKRYIHRDLATRNILV-ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 187
Query: 175 ---EESLTE---MMTAETGTYRWMAPELYSTV---------------TLRQGEKKHYN-- 211
ESLTE + ++ ++ + EL++ + +QG+ ++
Sbjct: 188 WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 247
Query: 212 ---HKNVR-PSAENVPEELSIILTSCWKEDPNARPNFTQI 247
N R P + P+E+ +I+T CW + N RP+F +
Sbjct: 248 ELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 287
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 123/280 (43%), Gaps = 57/280 (20%)
Query: 21 IDPKHLFVGPRIGEGAHAKVYEGKY---KNQTVAIKIVHKGETPEEIAKKESRFAREVAM 77
+ +HL ++G+G V +Y ++ T + V K + E ++ F RE+ +
Sbjct: 10 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEI 67
Query: 78 LSRVQHRNLVKFIGACKEP---VMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDI 134
L +QH N+VK+ G C + ++ E L G+LR YL + R +D + + I
Sbjct: 68 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQI 126
Query: 135 ARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR-------------------- 174
+ ME L + IHRDL N+L+ E+ +K+ DFGL +
Sbjct: 127 CKGMEYLGTKRYIHRDLATRNILV-ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 185
Query: 175 ---EESLTE---MMTAETGTYRWMAPELYSTV---------------TLRQGEKKHYN-- 211
ESLTE + ++ ++ + EL++ + +QG+ ++
Sbjct: 186 WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 245
Query: 212 ---HKNVR-PSAENVPEELSIILTSCWKEDPNARPNFTQI 247
N R P + P+E+ +I+T CW + N RP+F +
Sbjct: 246 ELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 285
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 123/280 (43%), Gaps = 57/280 (20%)
Query: 21 IDPKHLFVGPRIGEGAHAKVYEGKY---KNQTVAIKIVHKGETPEEIAKKESRFAREVAM 77
+ +HL ++G+G V +Y ++ T + V K + E ++ F RE+ +
Sbjct: 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEI 64
Query: 78 LSRVQHRNLVKFIGACKEP---VMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDI 134
L +QH N+VK+ G C + ++ E L G+LR YL + R +D + + I
Sbjct: 65 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQI 123
Query: 135 ARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR-------------------- 174
+ ME L + IHRDL N+L+ E+ +K+ DFGL +
Sbjct: 124 CKGMEYLGTKRYIHRDLATRNILV-ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 182
Query: 175 ---EESLTE---MMTAETGTYRWMAPELYSTV---------------TLRQGEKKHYN-- 211
ESLTE + ++ ++ + EL++ + +QG+ ++
Sbjct: 183 WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 242
Query: 212 ---HKNVR-PSAENVPEELSIILTSCWKEDPNARPNFTQI 247
N R P + P+E+ +I+T CW + N RP+F +
Sbjct: 243 ELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 282
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 82/187 (43%), Gaps = 29/187 (15%)
Query: 32 IGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
IG G +V++ K++ +T IK V E REV L+++ H N+V +
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAE---------REVKALAKLDHVNIVHY 69
Query: 90 IGA-----------------CKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFAL 132
G K + I E GTL +++ R LD +A+
Sbjct: 70 NGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFE 129
Query: 133 DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWM 192
I + ++ +HS +I+RDLKP N+ L D K +K+ DFGL GT R+M
Sbjct: 130 QITKGVDYIHSKKLINRDLKPSNIFLV-DTKQVKIGDFGLVTSLKNDGKRXRSKGTLRYM 188
Query: 193 APELYST 199
+PE S+
Sbjct: 189 SPEQISS 195
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 123/280 (43%), Gaps = 57/280 (20%)
Query: 21 IDPKHLFVGPRIGEGAHAKVYEGKY---KNQTVAIKIVHKGETPEEIAKKESRFAREVAM 77
+ +HL ++G+G V +Y ++ T + V K + E ++ F RE+ +
Sbjct: 13 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEI 70
Query: 78 LSRVQHRNLVKFIGACKEP---VMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDI 134
L +QH N+VK+ G C + ++ E L G+LR YL + R +D + + I
Sbjct: 71 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQI 129
Query: 135 ARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR-------------------- 174
+ ME L + IHRDL N+L+ E+ +K+ DFGL +
Sbjct: 130 CKGMEYLGTKRYIHRDLATRNILV-ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 188
Query: 175 ---EESLTE---MMTAETGTYRWMAPELYSTV---------------TLRQGEKKHYN-- 211
ESLTE + ++ ++ + EL++ + +QG+ ++
Sbjct: 189 WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 248
Query: 212 ---HKNVR-PSAENVPEELSIILTSCWKEDPNARPNFTQI 247
N R P + P+E+ +I+T CW + N RP+F +
Sbjct: 249 ELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 288
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 90/184 (48%), Gaps = 13/184 (7%)
Query: 22 DPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKE-SRFAREVAMLSR 80
D + L IG G+ VY+G TV + + ++ K E RF E L
Sbjct: 24 DGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQD--RKLTKSERQRFKEEAEXLKG 81
Query: 81 VQHRNLVKFIGACKEPV-----MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIA 135
+QH N+V+F + + V +V+VTEL + GTL+ YL R + + V + I
Sbjct: 82 LQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYL--KRFKVXKIKVLRSWCRQIL 139
Query: 136 RAMECLHSHG--IIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMA 193
+ ++ LH+ IIHRDLK +N+ +T ++K+ D GLA + + A GT + A
Sbjct: 140 KGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS-FAKAVIGTPEFXA 198
Query: 194 PELY 197
PE Y
Sbjct: 199 PEXY 202
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 123/280 (43%), Gaps = 57/280 (20%)
Query: 21 IDPKHLFVGPRIGEGAHAKVYEGKY---KNQTVAIKIVHKGETPEEIAKKESRFAREVAM 77
+ +HL ++G+G V +Y ++ T + V K + E ++ F RE+ +
Sbjct: 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEI 64
Query: 78 LSRVQHRNLVKFIGACKEP---VMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDI 134
L +QH N+VK+ G C + ++ E L G+LR YL + R +D + + I
Sbjct: 65 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQI 123
Query: 135 ARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR-------------------- 174
+ ME L + IHRDL N+L+ E+ +K+ DFGL +
Sbjct: 124 CKGMEYLGTKRYIHRDLATRNILV-ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 182
Query: 175 ---EESLTE---MMTAETGTYRWMAPELYSTV---------------TLRQGEKKHYN-- 211
ESLTE + ++ ++ + EL++ + +QG+ ++
Sbjct: 183 WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 242
Query: 212 ---HKNVR-PSAENVPEELSIILTSCWKEDPNARPNFTQI 247
N R P + P+E+ +I+T CW + N RP+F +
Sbjct: 243 ELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 282
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 123/280 (43%), Gaps = 57/280 (20%)
Query: 21 IDPKHLFVGPRIGEGAHAKVYEGKY---KNQTVAIKIVHKGETPEEIAKKESRFAREVAM 77
+ +HL ++G+G V +Y ++ T + V K + E ++ F RE+ +
Sbjct: 25 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEI 82
Query: 78 LSRVQHRNLVKFIGACKEPV---MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDI 134
L +QH N+VK+ G C + ++ E L G+LR YL + R +D + + I
Sbjct: 83 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQI 141
Query: 135 ARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR-------------------- 174
+ ME L + IHRDL N+L+ E+ +K+ DFGL +
Sbjct: 142 CKGMEYLGTKRYIHRDLATRNILV-ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 200
Query: 175 ---EESLTE---MMTAETGTYRWMAPELYSTV---------------TLRQGEKKHYN-- 211
ESLTE + ++ ++ + EL++ + +QG+ ++
Sbjct: 201 WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 260
Query: 212 ---HKNVR-PSAENVPEELSIILTSCWKEDPNARPNFTQI 247
N R P + P+E+ +I+T CW + N RP+F +
Sbjct: 261 ELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 300
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 123/280 (43%), Gaps = 57/280 (20%)
Query: 21 IDPKHLFVGPRIGEGAHAKVYEGKY---KNQTVAIKIVHKGETPEEIAKKESRFAREVAM 77
+ +HL ++G+G V +Y ++ T + V K + E ++ F RE+ +
Sbjct: 25 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEI 82
Query: 78 LSRVQHRNLVKFIGACKEP---VMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDI 134
L +QH N+VK+ G C + ++ E L G+LR YL + R +D + + I
Sbjct: 83 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQI 141
Query: 135 ARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR-------------------- 174
+ ME L + IHRDL N+L+ E+ +K+ DFGL +
Sbjct: 142 CKGMEYLGTKRYIHRDLATRNILV-ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 200
Query: 175 ---EESLTE---MMTAETGTYRWMAPELYSTV---------------TLRQGEKKHYN-- 211
ESLTE + ++ ++ + EL++ + +QG+ ++
Sbjct: 201 WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 260
Query: 212 ---HKNVR-PSAENVPEELSIILTSCWKEDPNARPNFTQI 247
N R P + P+E+ +I+T CW + N RP+F +
Sbjct: 261 ELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 300
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 116/300 (38%), Gaps = 63/300 (21%)
Query: 12 ELKLDAKWLIDPKHLFVGPRIGEGAHAKVYEGK---YKNQTVAIKIVHKGETPEEIAKKE 68
+L + KW +L G +G GA KV E + +K+ K A ++
Sbjct: 19 QLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK 78
Query: 69 SRFAREVAMLSRV-QHRNLVKFIGACKE--PVMVIVTELLSGGTLRKYLLNMRPRCLDVC 125
E+ ++S + QH N+V +GAC PV+VI TE G L +L L
Sbjct: 79 EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVI-TEYCCYGDLLNFLRRKAEAMLGPS 137
Query: 126 VAIG---------------------FALDIARAMECLHSHGIIHRDLKPENLLLTEDLKT 164
+A G F+ +A+ M L S IHRD+ N+LLT
Sbjct: 138 LAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNG-HV 196
Query: 165 IKLADFGLAREESLTEMMTAETGTYR----WMAPE-LYSTVTLRQGEKKHYN-------- 211
K+ DFGLAR + + + G R WMAPE ++ V Q + Y
Sbjct: 197 AKIGDFGLAR-DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
Query: 212 ---------------HKNVRPSAEN-----VPEELSIILTSCWKEDPNARPNFTQIIQML 251
+K V+ + P+ + I+ +CW +P RP F QI L
Sbjct: 256 LGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFL 315
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 29/179 (16%)
Query: 32 IGEGAHAKVY--EGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+G GA ++V E K + A+K + K + + KES E+A+L +++H N+V
Sbjct: 30 LGTGAFSEVVLAEEKATGKLFAVKCIPK----KALKGKESSIENEIAVLRKIKHENIVAL 85
Query: 90 IGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALD---------IARAME 139
+ P + +V +L+SGG L D V GF + + A+
Sbjct: 86 EDIYESPNHLYLVMQLVSGGEL-----------FDRIVEKGFYTEKDASTLIRQVLDAVY 134
Query: 140 CLHSHGIIHRDLKPENLLL--TEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
LH GI+HRDLKPENLL ++ I ++DFGL++ E ++M+ GT ++APE+
Sbjct: 135 YLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEV 193
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 85/170 (50%), Gaps = 9/170 (5%)
Query: 32 IGEGAHAKVYEGKY--KNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
IG+G AKV ++ + VA+KI+ K + +K REV ++ + H N+VK
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQK---LFREVRIMKVLNHPNIVKL 78
Query: 90 IGACK-EPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
+ E + +V E SGG + YL+ R + F I A++ H I+H
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLV-AHGRMKEKEARAKFR-QIVSAVQYCHQKFIVH 136
Query: 149 RDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPELYS 198
RDLK ENLLL D+ IK+ADFG + E + + A G + APEL+
Sbjct: 137 RDLKAENLLLDADM-NIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQ 185
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 89/178 (50%), Gaps = 16/178 (8%)
Query: 32 IGEGAHAKVYEGKYKNQT-VAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKFI 90
+G G KVY+G+ + T VA+K + + E E +F EV M+S HRNL++
Sbjct: 46 LGRGGFGKVYKGRLADGTLVAVKRLKE----ERXQGGELQFQTEVEMISMAVHRNLLRLR 101
Query: 91 GACKEPV-MVIVTELLSGGTLRKYLLNMRPRC---LDVCVAIGFALDIARAMECLHSH-- 144
G C P ++V ++ G++ L RP LD AL AR + LH H
Sbjct: 102 GFCMTPTERLLVYPYMANGSVAS-CLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCD 160
Query: 145 -GIIHRDLKPENLLLTEDLKTIKLADFGLAR--EESLTEMMTAETGTYRWMAPELYST 199
IIHRD+K N+LL E+ + + + DFGLA+ + + A GT +APE ST
Sbjct: 161 PKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLST 217
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 88/178 (49%), Gaps = 20/178 (11%)
Query: 32 IGEGAHAKVYEGK--YKNQTVAIKIVH--KGETPEEIAKKESRFAREVAMLSRVQ---HR 84
IG GA+ VY+ + + VA+K V GE I+ REVA+L R++ H
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPIST-----VREVALLRRLEAFEHP 66
Query: 85 NLVKFIGAC------KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAM 138
N+V+ + C +E + +V E + LR YL P L R +
Sbjct: 67 NVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGL 125
Query: 139 ECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+ LH++ I+HRDLKPEN+L+T T+KLADFGLAR S + T + APE+
Sbjct: 126 DFLHANCIVHRDLKPENILVTSG-GTVKLADFGLARIYSYQMALAPVVVTLWYRAPEV 182
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 99/188 (52%), Gaps = 18/188 (9%)
Query: 32 IGEGAHAKVYEGKYKNQTV--AIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+G+GA KVY+ + K +V A K++ ++ EE+ + E+ +L+ H N+VK
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDT-KSEEEL----EDYMVEIDILASCDHPNIVKL 99
Query: 90 IGACK-EPVMVIVTELLSGGTLRKYLLNM-RPRC-LDVCVAIGFALDIARAMECLHSHGI 146
+ A E + I+ E +GG + +L + RP + V LD A+ LH + I
Sbjct: 100 LDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD---ALNYLHDNKI 156
Query: 147 IHRDLKPENLLLTEDLKTIKLADFGLAREESLT-EMMTAETGTYRWMAPELYSTVTLRQG 205
IHRDLK N+L T D IKLADFG++ + + T + + GT WMAPE+ V
Sbjct: 157 IHRDLKAGNILFTLD-GDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEV---VMCETS 212
Query: 206 EKKHYNHK 213
+ + Y++K
Sbjct: 213 KDRPYDYK 220
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 83/200 (41%), Gaps = 42/200 (21%)
Query: 32 IGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
IG G +V++ K++ +T I+ V E REV L+++ H N+V +
Sbjct: 20 IGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAE---------REVKALAKLDHVNIVHY 70
Query: 90 IGA------------------------------CKEPVMVIVTELLSGGTLRKYLLNMRP 119
G K + I E GTL +++ R
Sbjct: 71 NGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG 130
Query: 120 RCLDVCVAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLT 179
LD +A+ I + ++ +HS +IHRDLKP N+ L D K +K+ DFGL
Sbjct: 131 EKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLV-DTKQVKIGDFGLVTSLKND 189
Query: 180 EMMTAETGTYRWMAPELYST 199
T GT R+M+PE S+
Sbjct: 190 GKRTRSKGTLRYMSPEQISS 209
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 91/180 (50%), Gaps = 31/180 (17%)
Query: 32 IGEGAHAKVY--EGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+G GA ++V E K + VAIK + K E + KE E+A+L +++H N+V
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAK----EALEGKEGSMENEIAVLHKIKHPNIVAL 81
Query: 90 IGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGF---------ALDIARAME 139
+ + ++ +L+SGG L D V GF + A++
Sbjct: 82 DDIYESGGHLYLIMQLVSGGEL-----------FDRIVEKGFYTERDASRLIFQVLDAVK 130
Query: 140 CLHSHGIIHRDLKPENLL---LTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
LH GI+HRDLKPENLL L ED K I ++DFGL++ E +++ GT ++APE+
Sbjct: 131 YLHDLGIVHRDLKPENLLYYSLDEDSK-IMISDFGLSKMEDPGSVLSTACGTPGYVAPEV 189
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 109/270 (40%), Gaps = 60/270 (22%)
Query: 32 IGEGAHAKVYEGKY-------KNQTVAIKIV-HKGETPEEIAKKESRFAREVAMLSRVQH 83
+GE KVY+G + Q VAIK + K E P F E + +R+QH
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGP-----LREEFRHEAMLRARLQH 88
Query: 84 RNLVKFIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPR--------------CLDVCVAI 128
N+V +G K+ + ++ S G L ++L+ P L+ +
Sbjct: 89 PNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 148
Query: 129 GFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLARE---ESLTEMMTAE 185
IA ME L SH ++H+DL N+L+ + L +K++D GL RE +++
Sbjct: 149 HLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKL-NVKISDLGLFREVYAADYYKLLGNS 207
Query: 186 TGTYRWMAPE--LYSTVTL--------------------------RQGEKKHYNHKNVRP 217
RWMAPE +Y ++ Q + ++ V P
Sbjct: 208 LLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLP 267
Query: 218 SAENVPEELSIILTSCWKEDPNARPNFTQI 247
++ P + ++ CW E P+ RP F I
Sbjct: 268 CPDDCPAWVYALMIECWNEFPSRRPRFKDI 297
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 91/180 (50%), Gaps = 31/180 (17%)
Query: 32 IGEGAHAKVY--EGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+G GA ++V E K + VAIK + K E + KE E+A+L +++H N+V
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAK----EALEGKEGSMENEIAVLHKIKHPNIVAL 81
Query: 90 IGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGF---------ALDIARAME 139
+ + ++ +L+SGG L D V GF + A++
Sbjct: 82 DDIYESGGHLYLIMQLVSGGEL-----------FDRIVEKGFYTERDASRLIFQVLDAVK 130
Query: 140 CLHSHGIIHRDLKPENLL---LTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
LH GI+HRDLKPENLL L ED K I ++DFGL++ E +++ GT ++APE+
Sbjct: 131 YLHDLGIVHRDLKPENLLYYSLDEDSK-IMISDFGLSKMEDPGSVLSTACGTPGYVAPEV 189
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 115/253 (45%), Gaps = 43/253 (16%)
Query: 32 IGEGAHAKVYEGKY--KNQTV----AIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G GA VY+G + + +TV AIKI+++ P K F E +++ + H +
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGP----KANVEFMDEALIMASMDHPH 78
Query: 86 LVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
LV+ +G C P + +VT+L+ G L +Y+ + + + + + + IA+ M L
Sbjct: 79 LVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDN-IGSQLLLNWCVQIAKGMMYLEERR 137
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAR-EESLTEMMTAETGTY--RWMAPEL--YSTV 200
++HRDL N+L+ +K+ DFGLAR E + A+ G +WMA E Y
Sbjct: 138 LVHRDLAARNVLVKSP-NHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKF 196
Query: 201 T--------------LRQGEKKHYNHKNVR------PSAENVPE------ELSIILTSCW 234
T L K Y+ R E +P+ ++ +++ CW
Sbjct: 197 THQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQPPICTIDVYMVMVKCW 256
Query: 235 KEDPNARPNFTQI 247
D ++RP F ++
Sbjct: 257 MIDADSRPKFKEL 269
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 88/178 (49%), Gaps = 20/178 (11%)
Query: 32 IGEGAHAKVYEGK--YKNQTVAIKIVH--KGETPEEIAKKESRFAREVAMLSRVQ---HR 84
IG GA+ VY+ + + VA+K V GE I+ REVA+L R++ H
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPIST-----VREVALLRRLEAFEHP 66
Query: 85 NLVKFIGAC------KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAM 138
N+V+ + C +E + +V E + LR YL P L R +
Sbjct: 67 NVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGL 125
Query: 139 ECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+ LH++ I+HRDLKPEN+L+T T+KLADFGLAR S + T + APE+
Sbjct: 126 DFLHANCIVHRDLKPENILVTSG-GTVKLADFGLARIYSYQMALDPVVVTLWYRAPEV 182
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 91/180 (50%), Gaps = 31/180 (17%)
Query: 32 IGEGAHAKVY--EGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+G GA ++V E K + VAIK + K E + KE E+A+L +++H N+V
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAK----EALEGKEGSMENEIAVLHKIKHPNIVAL 81
Query: 90 IGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGF---------ALDIARAME 139
+ + ++ +L+SGG L D V GF + A++
Sbjct: 82 DDIYESGGHLYLIMQLVSGGEL-----------FDRIVEKGFYTERDASRLIFQVLDAVK 130
Query: 140 CLHSHGIIHRDLKPENLL---LTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
LH GI+HRDLKPENLL L ED K I ++DFGL++ E +++ GT ++APE+
Sbjct: 131 YLHDLGIVHRDLKPENLLYYSLDEDSK-IMISDFGLSKMEDPGSVLSTACGTPGYVAPEV 189
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 87/170 (51%), Gaps = 9/170 (5%)
Query: 31 RIGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+IGEG + VY+ + K + VA+K + E + S RE+++L + H N+VK
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHPNIVK 69
Query: 89 FIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGII 147
+ E + +V E LS L+K++ + + + + + + + HSH ++
Sbjct: 70 LLDVIHTENKLYLVFEFLSMD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 128
Query: 148 HRDLKPENLLLTEDLKTIKLADFGLAREESL-TEMMTAETGTYRWMAPEL 196
HRDLKPENLL+ + IKLADFGLAR + E T + APE+
Sbjct: 129 HRDLKPENLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 177
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 87/170 (51%), Gaps = 9/170 (5%)
Query: 31 RIGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+IGEG + VY+ + K + VA+K + E + S RE+++L + H N+VK
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHPNIVK 67
Query: 89 FIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGII 147
+ E + +V E LS L+K++ + + + + + + + HSH ++
Sbjct: 68 LLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 126
Query: 148 HRDLKPENLLLTEDLKTIKLADFGLAREESL-TEMMTAETGTYRWMAPEL 196
HRDLKPENLL+ + IKLADFGLAR + E T + APE+
Sbjct: 127 HRDLKPENLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 175
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 109/270 (40%), Gaps = 60/270 (22%)
Query: 32 IGEGAHAKVYEGKY-------KNQTVAIKIV-HKGETPEEIAKKESRFAREVAMLSRVQH 83
+GE KVY+G + Q VAIK + K E P F E + +R+QH
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGP-----LREEFRHEAMLRARLQH 71
Query: 84 RNLVKFIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPR--------------CLDVCVAI 128
N+V +G K+ + ++ S G L ++L+ P L+ +
Sbjct: 72 PNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 131
Query: 129 GFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLARE---ESLTEMMTAE 185
IA ME L SH ++H+DL N+L+ + L +K++D GL RE +++
Sbjct: 132 HLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKL-NVKISDLGLFREVYAADYYKLLGNS 190
Query: 186 TGTYRWMAPE--LYSTVTL--------------------------RQGEKKHYNHKNVRP 217
RWMAPE +Y ++ Q + ++ V P
Sbjct: 191 LLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLP 250
Query: 218 SAENVPEELSIILTSCWKEDPNARPNFTQI 247
++ P + ++ CW E P+ RP F I
Sbjct: 251 CPDDCPAWVYALMIECWNEFPSRRPRFKDI 280
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 116/281 (41%), Gaps = 58/281 (20%)
Query: 32 IGEGAHAKVYEGKYKN----QTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLV 87
+GEGA KV+ + N Q + V + E A+++ F RE +L+ +QH+++V
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQD--FQREAELLTMLQHQHIV 106
Query: 88 KFIGACKEPV-MVIVTELLSGGTLRKYLL-------------NMRPRCLDVCVAIGFALD 133
+F G C E +++V E + G L ++L ++ P L + + A
Sbjct: 107 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 166
Query: 134 IARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY---R 190
+A M L +HRDL N L+ + L +K+ DFG++R+ T+ T R
Sbjct: 167 VAAGMVYLAGLHFVHRDLATRNCLVGQGL-VVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 225
Query: 191 WMAPE--LYSTVT---------------LRQGEKKHYNHKNV-------------RPSAE 220
WM PE LY T G++ Y N RP A
Sbjct: 226 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRA- 284
Query: 221 NVPEELSIILTSCWKEDPNARPNFTQIIQMLLNYLSAIAPP 261
P E+ I+ CW+ +P R + + L A APP
Sbjct: 285 -CPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL--AQAPP 322
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 87/170 (51%), Gaps = 9/170 (5%)
Query: 31 RIGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+IGEG + VY+ + K + VA+K + E + S RE+++L + H N+VK
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHPNIVK 66
Query: 89 FIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGII 147
+ E + +V E L L+K++ + + + + + + + HSH ++
Sbjct: 67 LLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHRVL 125
Query: 148 HRDLKPENLLLTEDLKTIKLADFGLAREESL-TEMMTAETGTYRWMAPEL 196
HRDLKP+NLL+ + IKLADFGLAR + T E T + APE+
Sbjct: 126 HRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 174
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 116/281 (41%), Gaps = 58/281 (20%)
Query: 32 IGEGAHAKVYEGKYKN----QTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLV 87
+GEGA KV+ + N Q + V + E A+++ F RE +L+ +QH+++V
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQD--FQREAELLTMLQHQHIV 77
Query: 88 KFIGACKEPV-MVIVTELLSGGTLRKYLL-------------NMRPRCLDVCVAIGFALD 133
+F G C E +++V E + G L ++L ++ P L + + A
Sbjct: 78 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 137
Query: 134 IARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY---R 190
+A M L +HRDL N L+ + L +K+ DFG++R+ T+ T R
Sbjct: 138 VAAGMVYLAGLHFVHRDLATRNCLVGQGL-VVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 196
Query: 191 WMAPE--LYSTVT---------------LRQGEKKHYNHKNV-------------RPSAE 220
WM PE LY T G++ Y N RP A
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRA- 255
Query: 221 NVPEELSIILTSCWKEDPNARPNFTQIIQMLLNYLSAIAPP 261
P E+ I+ CW+ +P R + + L A APP
Sbjct: 256 -CPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL--AQAPP 293
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 96/194 (49%), Gaps = 12/194 (6%)
Query: 9 LADELKLDAKWLIDPKHLFVGPRIGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAK 66
+A++ K D + I H +G +G G KV GK++ VA+KI+++ +
Sbjct: 3 MAEKQKHDGRVKI--GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVV 60
Query: 67 KESRFAREVAMLSRVQHRNLVKFIGACKEPV-MVIVTELLSGGTLRKYLL-NMRPRCLDV 124
+ R RE+ L +H +++K P + +V E +SGG L Y+ N R LD
Sbjct: 61 GKIR--REIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGR---LDE 115
Query: 125 CVAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTA 184
+ I ++ H H ++HRDLKPEN+LL + K+ADFGL+ S E +
Sbjct: 116 KESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNA-KIADFGLSNMMSDGEFLRX 174
Query: 185 ETGTYRWMAPELYS 198
G+ + APE+ S
Sbjct: 175 SCGSPNYAAPEVIS 188
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 88/178 (49%), Gaps = 20/178 (11%)
Query: 32 IGEGAHAKVYEGK--YKNQTVAIKIVH--KGETPEEIAKKESRFAREVAMLSRVQ---HR 84
IG GA+ VY+ + + VA+K V GE I+ REVA+L R++ H
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPIST-----VREVALLRRLEAFEHP 66
Query: 85 NLVKFIGAC------KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAM 138
N+V+ + C +E + +V E + LR YL P L R +
Sbjct: 67 NVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGL 125
Query: 139 ECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+ LH++ I+HRDLKPEN+L+T T+KLADFGLAR S + T + APE+
Sbjct: 126 DFLHANCIVHRDLKPENILVTSG-GTVKLADFGLARIYSYQMALFPVVVTLWYRAPEV 182
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 115/253 (45%), Gaps = 43/253 (16%)
Query: 32 IGEGAHAKVYEGKY--KNQTV----AIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G GA VY+G + + +TV AIKI+++ P K F E +++ + H +
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGP----KANVEFMDEALIMASMDHPH 101
Query: 86 LVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
LV+ +G C P + +VT+L+ G L +Y+ + + + + + + IA+ M L
Sbjct: 102 LVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDN-IGSQLLLNWCVQIAKGMMYLEERR 160
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAR-EESLTEMMTAETGTY--RWMAPEL--YSTV 200
++HRDL N+L+ +K+ DFGLAR E + A+ G +WMA E Y
Sbjct: 161 LVHRDLAARNVLVKSP-NHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKF 219
Query: 201 T--------------LRQGEKKHYNHKNVR------PSAENVPE------ELSIILTSCW 234
T L K Y+ R E +P+ ++ +++ CW
Sbjct: 220 THQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQPPICTIDVYMVMVKCW 279
Query: 235 KEDPNARPNFTQI 247
D ++RP F ++
Sbjct: 280 MIDADSRPKFKEL 292
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 116/281 (41%), Gaps = 58/281 (20%)
Query: 32 IGEGAHAKVYEGKYKN----QTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLV 87
+GEGA KV+ + N Q + V + E A+++ F RE +L+ +QH+++V
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQD--FQREAELLTMLQHQHIV 83
Query: 88 KFIGACKEPV-MVIVTELLSGGTLRKYLL-------------NMRPRCLDVCVAIGFALD 133
+F G C E +++V E + G L ++L ++ P L + + A
Sbjct: 84 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 143
Query: 134 IARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY---R 190
+A M L +HRDL N L+ + L +K+ DFG++R+ T+ T R
Sbjct: 144 VAAGMVYLAGLHFVHRDLATRNCLVGQGL-VVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 202
Query: 191 WMAPE--LYSTVT---------------LRQGEKKHYNHKNV-------------RPSAE 220
WM PE LY T G++ Y N RP A
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRA- 261
Query: 221 NVPEELSIILTSCWKEDPNARPNFTQIIQMLLNYLSAIAPP 261
P E+ I+ CW+ +P R + + L A APP
Sbjct: 262 -CPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL--AQAPP 299
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 97/188 (51%), Gaps = 18/188 (9%)
Query: 32 IGEGAHAKVYEGKYKNQTV--AIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+G+GA KVY+ + K +V A K++ ++ EE+ + E+ +L+ H N+VK
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDT-KSEEEL----EDYMVEIDILASCDHPNIVKL 99
Query: 90 IGACK-EPVMVIVTELLSGGTLRKYLLNM-RPRC-LDVCVAIGFALDIARAMECLHSHGI 146
+ A E + I+ E +GG + +L + RP + V LD A+ LH + I
Sbjct: 100 LDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD---ALNYLHDNKI 156
Query: 147 IHRDLKPENLLLTEDLKTIKLADFGL-AREESLTEMMTAETGTYRWMAPELYSTVTLRQG 205
IHRDLK N+L T D IKLADFG+ A+ + + GT WMAPE+ V
Sbjct: 157 IHRDLKAGNILFTLD-GDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEV---VMCETS 212
Query: 206 EKKHYNHK 213
+ + Y++K
Sbjct: 213 KDRPYDYK 220
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 85/170 (50%), Gaps = 9/170 (5%)
Query: 32 IGEGAHAKVYEGKY--KNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
IG+G AKV ++ + VA+KI+ K + +K REV ++ + H N+VK
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQK---LFREVRIMKVLNHPNIVKL 78
Query: 90 IGACK-EPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
+ E + +V E SGG + YL+ R + F I A++ H I+H
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLV-AHGRMKEKEARAKFR-QIVSAVQYCHQKFIVH 136
Query: 149 RDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPELYS 198
RDLK ENLLL D+ IK+ADFG + E + + G+ + APEL+
Sbjct: 137 RDLKAENLLLDADM-NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQ 185
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 91/177 (51%), Gaps = 17/177 (9%)
Query: 32 IGEGAHAKVYEG---KYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQ---HRN 85
IGEGA+ KV++ K + VA+K V + +T EE + REVA+L ++ H N
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRV-RVQTGEEGMPLST--IREVAVLRHLETFEHPN 75
Query: 86 LVKFIGAC------KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAME 139
+V+ C +E + +V E + L YL + + + R ++
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHVDQD-LTTYLDKVPEPGVPTETIKDMMFQLLRGLD 134
Query: 140 CLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
LHSH ++HRDLKP+N+L+T IKLADFGLAR S +T+ T + APE+
Sbjct: 135 FLHSHRVVHRDLKPQNILVTSS-GQIKLADFGLARIYSFQMALTSVVVTLWYRAPEV 190
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 85/170 (50%), Gaps = 9/170 (5%)
Query: 32 IGEGAHAKVYEGKY--KNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
IG+G AKV ++ + VA+KI+ K + +K REV ++ + H N+VK
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQK---LFREVRIMKVLNHPNIVKL 78
Query: 90 IGACK-EPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
+ E + +V E SGG + YL+ R + F I A++ H I+H
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLV-AHGRMKEKEARAKFR-QIVSAVQYCHQKFIVH 136
Query: 149 RDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPELYS 198
RDLK ENLLL D+ IK+ADFG + E + + G+ + APEL+
Sbjct: 137 RDLKAENLLLDADM-NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQ 185
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 123/280 (43%), Gaps = 57/280 (20%)
Query: 21 IDPKHLFVGPRIGEGAHAKVYEGKY---KNQTVAIKIVHKGETPEEIAKKESRFAREVAM 77
+ +HL ++G+G V +Y ++ T + V K + E ++ F RE+ +
Sbjct: 8 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEI 65
Query: 78 LSRVQHRNLVKFIGACKEP---VMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDI 134
L +QH N+VK+ G C + ++ E L G+LR YL + R +D + + I
Sbjct: 66 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQI 124
Query: 135 ARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR-------------------- 174
+ ME L + IHR+L N+L+ E+ +K+ DFGL +
Sbjct: 125 CKGMEYLGTKRYIHRNLATRNILV-ENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIF 183
Query: 175 ---EESLTE---MMTAETGTYRWMAPELYSTV---------------TLRQGEKKHYN-- 211
ESLTE + ++ ++ + EL++ + +QG+ ++
Sbjct: 184 WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 243
Query: 212 ---HKNVR-PSAENVPEELSIILTSCWKEDPNARPNFTQI 247
N R P + P+E+ +I+T CW + N RP+F +
Sbjct: 244 ELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 283
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 87/170 (51%), Gaps = 9/170 (5%)
Query: 31 RIGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+IGEG + VY+ + K + VA+K + E + S RE+++L + H N+VK
Sbjct: 17 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHPNIVK 73
Query: 89 FIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGII 147
+ E + +V E L L+K++ + + + + + + + HSH ++
Sbjct: 74 LLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 132
Query: 148 HRDLKPENLLLTEDLKTIKLADFGLAREESL-TEMMTAETGTYRWMAPEL 196
HRDLKP+NLL+ + IKLADFGLAR + T E T + APE+
Sbjct: 133 HRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 181
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 87/170 (51%), Gaps = 9/170 (5%)
Query: 31 RIGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+IGEG + VY+ + K + VA+K + E + S RE+++L + H N+VK
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHPNIVK 65
Query: 89 FIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGII 147
+ E + +V E L L+K++ + + + + + + + HSH ++
Sbjct: 66 LLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 124
Query: 148 HRDLKPENLLLTEDLKTIKLADFGLAREESL-TEMMTAETGTYRWMAPEL 196
HRDLKP+NLL+ + IKLADFGLAR + T E T + APE+
Sbjct: 125 HRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 173
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 91/177 (51%), Gaps = 17/177 (9%)
Query: 32 IGEGAHAKVYEG---KYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQ---HRN 85
IGEGA+ KV++ K + VA+K V + +T EE + REVA+L ++ H N
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRV-RVQTGEEGMPLST--IREVAVLRHLETFEHPN 75
Query: 86 LVKFIGAC------KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAME 139
+V+ C +E + +V E + L YL + + + R ++
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLD 134
Query: 140 CLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
LHSH ++HRDLKP+N+L+T IKLADFGLAR S +T+ T + APE+
Sbjct: 135 FLHSHRVVHRDLKPQNILVTSS-GQIKLADFGLARIYSFQMALTSVVVTLWYRAPEV 190
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 87/170 (51%), Gaps = 9/170 (5%)
Query: 31 RIGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+IGEG + VY+ + K + VA+K + E + S RE+++L + H N+VK
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHPNIVK 66
Query: 89 FIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGII 147
+ E + +V E L L+K++ + + + + + + + HSH ++
Sbjct: 67 LLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 125
Query: 148 HRDLKPENLLLTEDLKTIKLADFGLAREESL-TEMMTAETGTYRWMAPEL 196
HRDLKP+NLL+ + IKLADFGLAR + T E T + APE+
Sbjct: 126 HRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 174
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 87/170 (51%), Gaps = 9/170 (5%)
Query: 31 RIGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+IGEG + VY+ + K + VA+K + E + S RE+++L + H N+VK
Sbjct: 17 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHPNIVK 73
Query: 89 FIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGII 147
+ E + +V E L L+K++ + + + + + + + HSH ++
Sbjct: 74 LLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 132
Query: 148 HRDLKPENLLLTEDLKTIKLADFGLAREESL-TEMMTAETGTYRWMAPEL 196
HRDLKP+NLL+ + IKLADFGLAR + T E T + APE+
Sbjct: 133 HRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 181
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 87/170 (51%), Gaps = 9/170 (5%)
Query: 31 RIGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+IGEG + VY+ + K + VA+K + E + S RE+++L + H N+VK
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHPNIVK 66
Query: 89 FIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGII 147
+ E + +V E L L+K++ + + + + + + + HSH ++
Sbjct: 67 LLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 125
Query: 148 HRDLKPENLLLTEDLKTIKLADFGLAREESL-TEMMTAETGTYRWMAPEL 196
HRDLKP+NLL+ + IKLADFGLAR + T E T + APE+
Sbjct: 126 HRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 174
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 87/170 (51%), Gaps = 9/170 (5%)
Query: 31 RIGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+IGEG + VY+ + K + VA+K + E + S RE+++L + H N+VK
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHPNIVK 65
Query: 89 FIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGII 147
+ E + +V E L L+K++ + + + + + + + HSH ++
Sbjct: 66 LLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 124
Query: 148 HRDLKPENLLLTEDLKTIKLADFGLAREESL-TEMMTAETGTYRWMAPEL 196
HRDLKP+NLL+ + IKLADFGLAR + T E T + APE+
Sbjct: 125 HRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 173
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 92/181 (50%), Gaps = 9/181 (4%)
Query: 20 LIDPKHLFVGPRIGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAM 77
L+D ++ +IGEG + VY+ + K + VA+K + E + S RE+++
Sbjct: 3 LVDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISL 59
Query: 78 LSRVQHRNLVKFIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
L + H N+VK + E + +V E L L+K++ + + + + + +
Sbjct: 60 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQ 118
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESL-TEMMTAETGTYRWMAPE 195
+ HSH ++HRDLKP+NLL+ + IKLADFGLAR + T E T + APE
Sbjct: 119 GLAFCHSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 177
Query: 196 L 196
+
Sbjct: 178 I 178
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 122/280 (43%), Gaps = 57/280 (20%)
Query: 21 IDPKHLFVGPRIGEGAHAKVYEGKY---KNQTVAIKIVHKGETPEEIAKKESRFAREVAM 77
+ +HL ++G+G V +Y ++ T + V K + E ++ F RE+ +
Sbjct: 10 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEI 67
Query: 78 LSRVQHRNLVKFIGACKEP---VMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDI 134
L +QH N+VK+ G C + ++ E L G+LR YL R +D + + I
Sbjct: 68 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAER-IDHIKLLQYTSQI 126
Query: 135 ARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR-------------------- 174
+ ME L + IHRDL N+L+ E+ +K+ DFGL +
Sbjct: 127 CKGMEYLGTKRYIHRDLATRNILV-ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 185
Query: 175 ---EESLTE---MMTAETGTYRWMAPELYSTV---------------TLRQGEKKHYN-- 211
ESLTE + ++ ++ + EL++ + +QG+ ++
Sbjct: 186 WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 245
Query: 212 ---HKNVR-PSAENVPEELSIILTSCWKEDPNARPNFTQI 247
N R P + P+E+ +I+T CW + N RP+F +
Sbjct: 246 ELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 285
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 87/170 (51%), Gaps = 9/170 (5%)
Query: 31 RIGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+IGEG + VY+ + K + VA+K + E + S RE+++L + H N+VK
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHPNIVK 66
Query: 89 FIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGII 147
+ E + +V E L L+K++ + + + + + + + HSH ++
Sbjct: 67 LLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 125
Query: 148 HRDLKPENLLLTEDLKTIKLADFGLAREESL-TEMMTAETGTYRWMAPEL 196
HRDLKP+NLL+ + IKLADFGLAR + T E T + APE+
Sbjct: 126 HRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 174
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 87/170 (51%), Gaps = 9/170 (5%)
Query: 31 RIGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+IGEG + VY+ + K + VA+K + E + S RE+++L + H N+VK
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHPNIVK 67
Query: 89 FIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGII 147
+ E + +V E L L+K++ + + + + + + + HSH ++
Sbjct: 68 LLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 126
Query: 148 HRDLKPENLLLTEDLKTIKLADFGLAREESL-TEMMTAETGTYRWMAPEL 196
HRDLKP+NLL+ + IKLADFGLAR + T E T + APE+
Sbjct: 127 HRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 175
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 116/284 (40%), Gaps = 75/284 (26%)
Query: 24 KHLFVGPR---------IGEGAHAKVYEGKY-----KNQTVAIKIVHKGETPEEIAKKES 69
+H+ +GP IG G VY G K A+K +++ E+ S
Sbjct: 20 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV----S 75
Query: 70 RFAREVAMLSRVQHRNLVKFIGAC--KEPVMVIVTELLSGGTLRKYLLN--MRPRCLDVC 125
+F E ++ H N++ +G C E ++V + G LR ++ N P D+
Sbjct: 76 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL- 134
Query: 126 VAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAE 185
IGF L +A+ M+ L S +HRDL N +L E T+K+ADFGLAR+ E +
Sbjct: 135 --IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEYYSVH 191
Query: 186 TGT-----YRWMAPE------------LYS------------------------TVTLRQ 204
T +WMA E ++S TV L Q
Sbjct: 192 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 251
Query: 205 GEKKHYNHKNVRPSAENVPEELSIILTSCWKEDPNARPNFTQII 248
G + ++P E P+ L ++ CW RP+F++++
Sbjct: 252 GRRL------LQP--EYCPDPLYEVMLKCWHPKAEMRPSFSELV 287
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 116/285 (40%), Gaps = 75/285 (26%)
Query: 24 KHLFVGPR---------IGEGAHAKVYEGKY-----KNQTVAIKIVHKGETPEEIAKKES 69
+H+ +GP IG G VY G K A+K +++ E+ S
Sbjct: 13 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV----S 68
Query: 70 RFAREVAMLSRVQHRNLVKFIGAC--KEPVMVIVTELLSGGTLRKYLLN--MRPRCLDVC 125
+F E ++ H N++ +G C E ++V + G LR ++ N P D+
Sbjct: 69 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL- 127
Query: 126 VAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAE 185
IGF L +A+ M+ L S +HRDL N +L E T+K+ADFGLAR+ E +
Sbjct: 128 --IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEYYSVH 184
Query: 186 TGT-----YRWMAPE------------LYS------------------------TVTLRQ 204
T +WMA E ++S TV L Q
Sbjct: 185 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 244
Query: 205 GEKKHYNHKNVRPSAENVPEELSIILTSCWKEDPNARPNFTQIIQ 249
G + ++P E P+ L ++ CW RP+F++++
Sbjct: 245 GRRL------LQP--EYCPDPLYEVMLKCWHPKAEMRPSFSELVS 281
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 85/186 (45%), Gaps = 25/186 (13%)
Query: 28 VGPR------IGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRV 81
VGPR IGEGA+ V Y N +++ K +P E R RE+ +L R
Sbjct: 41 VGPRYTNLSYIGEGAYGMVCSA-YDNVN-KVRVAIKKISPFEHQTYCQRTLREIKILLRF 98
Query: 82 QHRNLVKFIGACKEPVM-----VIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+H N++ + P + V + L G L K L +C F I R
Sbjct: 99 RHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICY---FLYQILR 155
Query: 137 AMECLHSHGIIHRDLKPENLLL--TEDLKTIKLADFGLAR----EESLTEMMTAETGTYR 190
++ +HS ++HRDLKP NLLL T DL K+ DFGLAR + T +T T
Sbjct: 156 GLKYIHSANVLHRDLKPSNLLLNTTXDL---KICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 191 WMAPEL 196
+ APE+
Sbjct: 213 YRAPEI 218
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 90/173 (52%), Gaps = 8/173 (4%)
Query: 28 VGPRIGEGAHAKVY--EGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
VG +G+G+ A VY E + VAIK++ K + A R EV + +++H +
Sbjct: 15 VGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYK--AGMVQRVQNEVKIHCQLKHPS 72
Query: 86 LVKFIGACKEPVMV-IVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
+++ ++ V +V E+ G + +YL N R + A F I M LHSH
Sbjct: 73 ILELYNYFEDSNYVYLVLEMCHNGEMNRYLKN-RVKPFSENEARHFMHQIITGMLYLHSH 131
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLAREESL-TEMMTAETGTYRWMAPEL 196
GI+HRDL NLLLT ++ IK+ADFGLA + + E GT +++PE+
Sbjct: 132 GILHRDLTLSNLLLTRNM-NIKIADFGLATQLKMPHEKHYTLCGTPNYISPEI 183
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 87/171 (50%), Gaps = 11/171 (6%)
Query: 32 IGEGAHAKVYEGKY--KNQTVAIKIVHKGE-TPEEIAKKESRFAREVAMLSRVQHRNLVK 88
IG+G AKV ++ + VA+KI+ K + P + K REV ++ + H N+VK
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQK----LFREVRIMKILNHPNIVK 78
Query: 89 FIGACK-EPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGII 147
+ E + +V E SGG + YL+ R + F I A++ H I+
Sbjct: 79 LFEVIETEKTLYLVMEYASGGEVFDYLV-AHGRMKEKEARAKFR-QIVSAVQYCHQKYIV 136
Query: 148 HRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPELYS 198
HRDLK ENLLL D+ IK+ADFG + E ++ + G+ + APEL+
Sbjct: 137 HRDLKAENLLLDGDM-NIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQ 186
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 116/285 (40%), Gaps = 75/285 (26%)
Query: 24 KHLFVGPR---------IGEGAHAKVYEGKY-----KNQTVAIKIVHKGETPEEIAKKES 69
+H+ +GP IG G VY G K A+K +++ E+ S
Sbjct: 39 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV----S 94
Query: 70 RFAREVAMLSRVQHRNLVKFIGAC--KEPVMVIVTELLSGGTLRKYLLN--MRPRCLDVC 125
+F E ++ H N++ +G C E ++V + G LR ++ N P D+
Sbjct: 95 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL- 153
Query: 126 VAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAE 185
IGF L +A+ M+ L S +HRDL N +L E T+K+ADFGLAR+ E +
Sbjct: 154 --IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEYYSVH 210
Query: 186 TGT-----YRWMAPE------------LYS------------------------TVTLRQ 204
T +WMA E ++S TV L Q
Sbjct: 211 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 270
Query: 205 GEKKHYNHKNVRPSAENVPEELSIILTSCWKEDPNARPNFTQIIQ 249
G + ++P E P+ L ++ CW RP+F++++
Sbjct: 271 GRRL------LQP--EYCPDPLYEVMLKCWHPKAEMRPSFSELVS 307
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 116/285 (40%), Gaps = 75/285 (26%)
Query: 24 KHLFVGPR---------IGEGAHAKVYEGKY-----KNQTVAIKIVHKGETPEEIAKKES 69
+H+ +GP IG G VY G K A+K +++ E+ S
Sbjct: 40 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV----S 95
Query: 70 RFAREVAMLSRVQHRNLVKFIGAC--KEPVMVIVTELLSGGTLRKYLLN--MRPRCLDVC 125
+F E ++ H N++ +G C E ++V + G LR ++ N P D+
Sbjct: 96 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL- 154
Query: 126 VAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAE 185
IGF L +A+ M+ L S +HRDL N +L E T+K+ADFGLAR+ E +
Sbjct: 155 --IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEYYSVH 211
Query: 186 TGT-----YRWMAPE------------LYS------------------------TVTLRQ 204
T +WMA E ++S TV L Q
Sbjct: 212 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 271
Query: 205 GEKKHYNHKNVRPSAENVPEELSIILTSCWKEDPNARPNFTQIIQ 249
G + ++P E P+ L ++ CW RP+F++++
Sbjct: 272 GRRL------LQP--EYCPDPLYEVMLKCWHPKAEMRPSFSELVS 308
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 116/284 (40%), Gaps = 75/284 (26%)
Query: 24 KHLFVGPR---------IGEGAHAKVYEGKY-----KNQTVAIKIVHKGETPEEIAKKES 69
+H+ +GP IG G VY G K A+K +++ E+ S
Sbjct: 21 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV----S 76
Query: 70 RFAREVAMLSRVQHRNLVKFIGAC--KEPVMVIVTELLSGGTLRKYLLN--MRPRCLDVC 125
+F E ++ H N++ +G C E ++V + G LR ++ N P D+
Sbjct: 77 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL- 135
Query: 126 VAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAE 185
IGF L +A+ M+ L S +HRDL N +L E T+K+ADFGLAR+ E +
Sbjct: 136 --IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEYYSVH 192
Query: 186 TGT-----YRWMAPE------------LYS------------------------TVTLRQ 204
T +WMA E ++S TV L Q
Sbjct: 193 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 252
Query: 205 GEKKHYNHKNVRPSAENVPEELSIILTSCWKEDPNARPNFTQII 248
G + ++P E P+ L ++ CW RP+F++++
Sbjct: 253 GRRL------LQP--EYCPDPLYEVMLKCWHPKAEMRPSFSELV 288
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 116/285 (40%), Gaps = 75/285 (26%)
Query: 24 KHLFVGPR---------IGEGAHAKVYEGKY-----KNQTVAIKIVHKGETPEEIAKKES 69
+H+ +GP IG G VY G K A+K +++ E+ S
Sbjct: 16 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV----S 71
Query: 70 RFAREVAMLSRVQHRNLVKFIGAC--KEPVMVIVTELLSGGTLRKYLLN--MRPRCLDVC 125
+F E ++ H N++ +G C E ++V + G LR ++ N P D+
Sbjct: 72 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL- 130
Query: 126 VAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAE 185
IGF L +A+ M+ L S +HRDL N +L E T+K+ADFGLAR+ E +
Sbjct: 131 --IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEYYSVH 187
Query: 186 TGT-----YRWMAPE------------LYS------------------------TVTLRQ 204
T +WMA E ++S TV L Q
Sbjct: 188 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 247
Query: 205 GEKKHYNHKNVRPSAENVPEELSIILTSCWKEDPNARPNFTQIIQ 249
G + ++P E P+ L ++ CW RP+F++++
Sbjct: 248 GRRL------LQP--EYCPDPLYEVMLKCWHPKAEMRPSFSELVS 284
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 116/284 (40%), Gaps = 75/284 (26%)
Query: 24 KHLFVGPR---------IGEGAHAKVYEGKY-----KNQTVAIKIVHKGETPEEIAKKES 69
+H+ +GP IG G VY G K A+K +++ E+ S
Sbjct: 21 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV----S 76
Query: 70 RFAREVAMLSRVQHRNLVKFIGAC--KEPVMVIVTELLSGGTLRKYLLN--MRPRCLDVC 125
+F E ++ H N++ +G C E ++V + G LR ++ N P D+
Sbjct: 77 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL- 135
Query: 126 VAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAE 185
IGF L +A+ M+ L S +HRDL N +L E T+K+ADFGLAR+ E +
Sbjct: 136 --IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEYYSVH 192
Query: 186 TGT-----YRWMAPE------------LYS------------------------TVTLRQ 204
T +WMA E ++S TV L Q
Sbjct: 193 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 252
Query: 205 GEKKHYNHKNVRPSAENVPEELSIILTSCWKEDPNARPNFTQII 248
G + ++P E P+ L ++ CW RP+F++++
Sbjct: 253 GRRL------LQP--EYCPDPLYEVMLKCWHPKAEMRPSFSELV 288
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 85/169 (50%), Gaps = 9/169 (5%)
Query: 31 RIGEGAHAKVYEGK-YKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
++GEG + VY+ K + + VA+K + E I S RE+++L + H N+V
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIP---STAIREISLLKELHHPNIVSL 84
Query: 90 IGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
I E + +V E + L+K L + D + I + + R + H H I+H
Sbjct: 85 IDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKI-YLYQLLRGVAHCHQHRILH 142
Query: 149 RDLKPENLLLTEDLKTIKLADFGLAREESL-TEMMTAETGTYRWMAPEL 196
RDLKP+NLL+ D +KLADFGLAR + T E T + AP++
Sbjct: 143 RDLKPQNLLINSD-GALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDV 190
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 85/169 (50%), Gaps = 9/169 (5%)
Query: 31 RIGEGAHAKVYEGK-YKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
++GEG + VY+ K + + VA+K + E I S RE+++L + H N+V
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIP---STAIREISLLKELHHPNIVSL 84
Query: 90 IGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
I E + +V E + L+K L + D + I + + R + H H I+H
Sbjct: 85 IDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKI-YLYQLLRGVAHCHQHRILH 142
Query: 149 RDLKPENLLLTEDLKTIKLADFGLAREESL-TEMMTAETGTYRWMAPEL 196
RDLKP+NLL+ D +KLADFGLAR + T E T + AP++
Sbjct: 143 RDLKPQNLLINSD-GALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDV 190
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 91/177 (51%), Gaps = 17/177 (9%)
Query: 32 IGEGAHAKVYEG---KYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQ---HRN 85
IGEGA+ KV++ K + VA+K V + +T EE + REVA+L ++ H N
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRV-RVQTGEEGMPLST--IREVAVLRHLETFEHPN 75
Query: 86 LVKFIGAC------KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAME 139
+V+ C +E + +V E + L YL + + + R ++
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLD 134
Query: 140 CLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
LHSH ++HRDLKP+N+L+T IKLADFGLAR S +T+ T + APE+
Sbjct: 135 FLHSHRVVHRDLKPQNILVTSS-GQIKLADFGLARIYSFQMALTSVVVTLWYRAPEV 190
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 116/285 (40%), Gaps = 75/285 (26%)
Query: 24 KHLFVGPR---------IGEGAHAKVYEGKY-----KNQTVAIKIVHKGETPEEIAKKES 69
+H+ +GP IG G VY G K A+K +++ E+ S
Sbjct: 18 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV----S 73
Query: 70 RFAREVAMLSRVQHRNLVKFIGAC--KEPVMVIVTELLSGGTLRKYLLN--MRPRCLDVC 125
+F E ++ H N++ +G C E ++V + G LR ++ N P D+
Sbjct: 74 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL- 132
Query: 126 VAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAE 185
IGF L +A+ M+ L S +HRDL N +L E T+K+ADFGLAR+ E +
Sbjct: 133 --IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEYYSVH 189
Query: 186 TGT-----YRWMAPE------------LYS------------------------TVTLRQ 204
T +WMA E ++S TV L Q
Sbjct: 190 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 249
Query: 205 GEKKHYNHKNVRPSAENVPEELSIILTSCWKEDPNARPNFTQIIQ 249
G + ++P E P+ L ++ CW RP+F++++
Sbjct: 250 GRRL------LQP--EYCPDPLYEVMLKCWHPKAEMRPSFSELVS 286
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 87/171 (50%), Gaps = 11/171 (6%)
Query: 32 IGEGAHAKVYEGKY--KNQTVAIKIVHKGE-TPEEIAKKESRFAREVAMLSRVQHRNLVK 88
IG+G AKV ++ + VAIKI+ K + P + K REV ++ + H N+VK
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQK----LFREVRIMKILNHPNIVK 78
Query: 89 FIGACK-EPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGII 147
+ E + ++ E SGG + YL+ R + F I A++ H I+
Sbjct: 79 LFEVIETEKTLYLIMEYASGGEVFDYLV-AHGRMKEKEARSKFR-QIVSAVQYCHQKRIV 136
Query: 148 HRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPELYS 198
HRDLK ENLLL D+ IK+ADFG + E ++ + A G + APEL+
Sbjct: 137 HRDLKAENLLLDADM-NIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQ 186
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 116/285 (40%), Gaps = 75/285 (26%)
Query: 24 KHLFVGPR---------IGEGAHAKVYEGKY-----KNQTVAIKIVHKGETPEEIAKKES 69
+H+ +GP IG G VY G K A+K +++ E+ S
Sbjct: 19 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV----S 74
Query: 70 RFAREVAMLSRVQHRNLVKFIGAC--KEPVMVIVTELLSGGTLRKYLLN--MRPRCLDVC 125
+F E ++ H N++ +G C E ++V + G LR ++ N P D+
Sbjct: 75 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL- 133
Query: 126 VAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAE 185
IGF L +A+ M+ L S +HRDL N +L E T+K+ADFGLAR+ E +
Sbjct: 134 --IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEYYSVH 190
Query: 186 TGT-----YRWMAPE------------LYS------------------------TVTLRQ 204
T +WMA E ++S TV L Q
Sbjct: 191 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 250
Query: 205 GEKKHYNHKNVRPSAENVPEELSIILTSCWKEDPNARPNFTQIIQ 249
G + ++P E P+ L ++ CW RP+F++++
Sbjct: 251 GRRL------LQP--EYCPDPLYEVMLKCWHPKAEMRPSFSELVS 287
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 116/284 (40%), Gaps = 75/284 (26%)
Query: 24 KHLFVGPR---------IGEGAHAKVYEGKY-----KNQTVAIKIVHKGETPEEIAKKES 69
+H+ +GP IG G VY G K A+K +++ E+ S
Sbjct: 20 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV----S 75
Query: 70 RFAREVAMLSRVQHRNLVKFIGAC--KEPVMVIVTELLSGGTLRKYLLN--MRPRCLDVC 125
+F E ++ H N++ +G C E ++V + G LR ++ N P D+
Sbjct: 76 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL- 134
Query: 126 VAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAE 185
IGF L +A+ M+ L S +HRDL N +L E T+K+ADFGLAR+ E +
Sbjct: 135 --IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEXXSVH 191
Query: 186 TGT-----YRWMAPE------------LYS------------------------TVTLRQ 204
T +WMA E ++S TV L Q
Sbjct: 192 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 251
Query: 205 GEKKHYNHKNVRPSAENVPEELSIILTSCWKEDPNARPNFTQII 248
G + ++P E P+ L ++ CW RP+F++++
Sbjct: 252 GRRL------LQP--EYCPDPLYEVMLKCWHPKAEMRPSFSELV 287
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 96/188 (51%), Gaps = 18/188 (9%)
Query: 32 IGEGAHAKVYEGKYKNQTV--AIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+G+GA KVY+ + K +V A K++ ++ EE+ + E+ +L+ H N+VK
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDT-KSEEEL----EDYMVEIDILASCDHPNIVKL 99
Query: 90 IGACK-EPVMVIVTELLSGGTLRKYLLNM-RPRC-LDVCVAIGFALDIARAMECLHSHGI 146
+ A E + I+ E +GG + +L + RP + V LD A+ LH + I
Sbjct: 100 LDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD---ALNYLHDNKI 156
Query: 147 IHRDLKPENLLLTEDLKTIKLADFGL-AREESLTEMMTAETGTYRWMAPELYSTVTLRQG 205
IHRDLK N+L T D IKLADFG+ A+ + GT WMAPE+ V
Sbjct: 157 IHRDLKAGNILFTLD-GDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEV---VMCETS 212
Query: 206 EKKHYNHK 213
+ + Y++K
Sbjct: 213 KDRPYDYK 220
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 116/285 (40%), Gaps = 75/285 (26%)
Query: 24 KHLFVGPR---------IGEGAHAKVYEGKY-----KNQTVAIKIVHKGETPEEIAKKES 69
+H+ +GP IG G VY G K A+K +++ E+ S
Sbjct: 80 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV----S 135
Query: 70 RFAREVAMLSRVQHRNLVKFIGAC--KEPVMVIVTELLSGGTLRKYLLN--MRPRCLDVC 125
+F E ++ H N++ +G C E ++V + G LR ++ N P D+
Sbjct: 136 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL- 194
Query: 126 VAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAE 185
IGF L +A+ M+ L S +HRDL N +L E T+K+ADFGLAR+ E +
Sbjct: 195 --IGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEFDSVH 251
Query: 186 TGT-----YRWMAPE------------LYS------------------------TVTLRQ 204
T +WMA E ++S TV L Q
Sbjct: 252 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 311
Query: 205 GEKKHYNHKNVRPSAENVPEELSIILTSCWKEDPNARPNFTQIIQ 249
G + ++P E P+ L ++ CW RP+F++++
Sbjct: 312 GRRL------LQP--EYCPDPLYEVMLKCWHPKAEMRPSFSELVS 348
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 119/263 (45%), Gaps = 45/263 (17%)
Query: 22 DPKHLFVG-PRIGEGAHAKVYEGK--YKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
DPK + +IG+GA VY Q VAI+ ++ + P K+ E+ ++
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP-----KKELIINEILVM 71
Query: 79 SRVQHRNLVKFIGA-CKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARA 137
++ N+V ++ + + +V E L+GG+L + C+D + +A
Sbjct: 72 RENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQA 128
Query: 138 MECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAE-TGTYRWMAPEL 196
+E LHS+ +IHRD+K +N+LL D ++KL DFG + + + +E GT WMAPE+
Sbjct: 129 LEFLHSNQVIHRDIKSDNILLGMD-GSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEV 187
Query: 197 YS----------------TVTLRQGEKKHYNHKNVR----------PSAENVPEELSII- 229
+ + + +GE + N +R P +N PE+LS I
Sbjct: 188 VTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQN-PEKLSAIF 246
Query: 230 ---LTSCWKEDPNARPNFTQIIQ 249
L C D R + +++Q
Sbjct: 247 RDFLNRCLDMDVEKRGSAKELLQ 269
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 119/266 (44%), Gaps = 51/266 (19%)
Query: 22 DPKHLFVG-PRIGEGAHAKVYEGK--YKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
DPK + +IG+GA VY Q VAI+ ++ + P K+ E+ ++
Sbjct: 18 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP-----KKELIINEILVM 72
Query: 79 SRVQHRNLVKFIGA-CKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARA 137
++ N+V ++ + + +V E L+GG+L + C+D + +A
Sbjct: 73 RENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQA 129
Query: 138 MECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR----EESLTEMMTAETGTYRWMA 193
+E LHS+ +IHRD+K +N+LL D ++KL DFG E+S M GT WMA
Sbjct: 130 LEFLHSNQVIHRDIKSDNILLGMD-GSVKLTDFGFCAQITPEQSKRSXM---VGTPYWMA 185
Query: 194 PELYS----------------TVTLRQGEKKHYNHKNVR----------PSAENVPEELS 227
PE+ + + + +GE + N +R P +N PE+LS
Sbjct: 186 PEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQN-PEKLS 244
Query: 228 II----LTSCWKEDPNARPNFTQIIQ 249
I L C + D R + ++IQ
Sbjct: 245 AIFRDFLNRCLEMDVEKRGSAKELIQ 270
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 91/180 (50%), Gaps = 31/180 (17%)
Query: 32 IGEGAHAKVY--EGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+G GA ++V E K + VAIK + K + + KE E+A+L +++H N+V
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAK----KALEGKEGSMENEIAVLHKIKHPNIVAL 81
Query: 90 IGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGF---------ALDIARAME 139
+ + ++ +L+SGG L D V GF + A++
Sbjct: 82 DDIYESGGHLYLIMQLVSGGEL-----------FDRIVEKGFYTERDASRLIFQVLDAVK 130
Query: 140 CLHSHGIIHRDLKPENLL---LTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
LH GI+HRDLKPENLL L ED K I ++DFGL++ E +++ GT ++APE+
Sbjct: 131 YLHDLGIVHRDLKPENLLYYSLDEDSK-IMISDFGLSKMEDPGSVLSTACGTPGYVAPEV 189
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 116/285 (40%), Gaps = 75/285 (26%)
Query: 24 KHLFVGPR---------IGEGAHAKVYEGKY-----KNQTVAIKIVHKGETPEEIAKKES 69
+H+ +GP IG G VY G K A+K +++ E+ S
Sbjct: 21 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV----S 76
Query: 70 RFAREVAMLSRVQHRNLVKFIGAC--KEPVMVIVTELLSGGTLRKYLLN--MRPRCLDVC 125
+F E ++ H N++ +G C E ++V + G LR ++ N P D+
Sbjct: 77 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL- 135
Query: 126 VAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAE 185
IGF L +A+ M+ L S +HRDL N +L E T+K+ADFGLAR+ E +
Sbjct: 136 --IGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEFDSVH 192
Query: 186 TGT-----YRWMAPE------------LYS------------------------TVTLRQ 204
T +WMA E ++S TV L Q
Sbjct: 193 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 252
Query: 205 GEKKHYNHKNVRPSAENVPEELSIILTSCWKEDPNARPNFTQIIQ 249
G + ++P E P+ L ++ CW RP+F++++
Sbjct: 253 GRRL------LQP--EYCPDPLYEVMLKCWHPKAEMRPSFSELVS 289
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 88/172 (51%), Gaps = 10/172 (5%)
Query: 31 RIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKFI 90
++G G +A VY+G N+T + + K + S RE++++ ++H N+V+
Sbjct: 12 KLGNGTYATVYKGL--NKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLY 69
Query: 91 GAC-KEPVMVIVTELLSGGTLRKYL----LNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
E + +V E + L+KY+ + PR L++ + F + + + H +
Sbjct: 70 DVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK 128
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAREESL-TEMMTAETGTYRWMAPEL 196
I+HRDLKP+NLL+ + +KL DFGLAR + ++E T + AP++
Sbjct: 129 ILHRDLKPQNLLINKR-GQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDV 179
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 83/170 (48%), Gaps = 9/170 (5%)
Query: 32 IGEGAHAKVYEGKY--KNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
IG+G AKV ++ + VA+KI+ K + +K REV + + H N+VK
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQK---LFREVRIXKVLNHPNIVKL 78
Query: 90 IGACK-EPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
+ E + +V E SGG + YL+ R + F I A++ H I+H
Sbjct: 79 FEVIETEKTLYLVXEYASGGEVFDYLV-AHGRXKEKEARAKFR-QIVSAVQYCHQKFIVH 136
Query: 149 RDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPELYS 198
RDLK ENLLL D IK+ADFG + E + + A G + APEL+
Sbjct: 137 RDLKAENLLLDAD-XNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQ 185
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 85/170 (50%), Gaps = 9/170 (5%)
Query: 32 IGEGAHAKVYEGKY--KNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
IG+G AKV ++ + VA++I+ K + +K REV ++ + H N+VK
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQK---LFREVRIMKVLNHPNIVKL 78
Query: 90 IGACK-EPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
+ E + +V E SGG + YL+ R + F I A++ H I+H
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLV-AHGRMKEKEARAKFR-QIVSAVQYCHQKFIVH 136
Query: 149 RDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPELYS 198
RDLK ENLLL D+ IK+ADFG + E + + G+ + APEL+
Sbjct: 137 RDLKAENLLLDADM-NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQ 185
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 116/285 (40%), Gaps = 75/285 (26%)
Query: 24 KHLFVGPR---------IGEGAHAKVYEGKY-----KNQTVAIKIVHKGETPEEIAKKES 69
+H+ +GP IG G VY G K A+K +++ E+ S
Sbjct: 26 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV----S 81
Query: 70 RFAREVAMLSRVQHRNLVKFIGAC--KEPVMVIVTELLSGGTLRKYLLN--MRPRCLDVC 125
+F E ++ H N++ +G C E ++V + G LR ++ N P D+
Sbjct: 82 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL- 140
Query: 126 VAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAE 185
IGF L +A+ M+ L S +HRDL N +L E T+K+ADFGLAR+ E +
Sbjct: 141 --IGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEFDSVH 197
Query: 186 TGT-----YRWMAPE------------LYS------------------------TVTLRQ 204
T +WMA E ++S TV L Q
Sbjct: 198 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 257
Query: 205 GEKKHYNHKNVRPSAENVPEELSIILTSCWKEDPNARPNFTQIIQ 249
G + ++P E P+ L ++ CW RP+F++++
Sbjct: 258 GRRL------LQP--EYCPDPLYEVMLKCWHPKAEMRPSFSELVS 294
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 116/285 (40%), Gaps = 75/285 (26%)
Query: 24 KHLFVGPR---------IGEGAHAKVYEGKY-----KNQTVAIKIVHKGETPEEIAKKES 69
+H+ +GP IG G VY G K A+K +++ E+ S
Sbjct: 21 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV----S 76
Query: 70 RFAREVAMLSRVQHRNLVKFIGAC--KEPVMVIVTELLSGGTLRKYLLN--MRPRCLDVC 125
+F E ++ H N++ +G C E ++V + G LR ++ N P D+
Sbjct: 77 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL- 135
Query: 126 VAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAE 185
IGF L +A+ M+ L S +HRDL N +L E T+K+ADFGLAR+ E +
Sbjct: 136 --IGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEFDSVH 192
Query: 186 TGT-----YRWMAPE------------LYS------------------------TVTLRQ 204
T +WMA E ++S TV L Q
Sbjct: 193 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 252
Query: 205 GEKKHYNHKNVRPSAENVPEELSIILTSCWKEDPNARPNFTQIIQ 249
G + ++P E P+ L ++ CW RP+F++++
Sbjct: 253 GRRL------LQP--EYCPDPLYEVMLKCWHPKAEMRPSFSELVS 289
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 116/285 (40%), Gaps = 75/285 (26%)
Query: 24 KHLFVGPR---------IGEGAHAKVYEGKY-----KNQTVAIKIVHKGETPEEIAKKES 69
+H+ +GP IG G VY G K A+K +++ E+ S
Sbjct: 22 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV----S 77
Query: 70 RFAREVAMLSRVQHRNLVKFIGAC--KEPVMVIVTELLSGGTLRKYLLN--MRPRCLDVC 125
+F E ++ H N++ +G C E ++V + G LR ++ N P D+
Sbjct: 78 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL- 136
Query: 126 VAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAE 185
IGF L +A+ M+ L S +HRDL N +L E T+K+ADFGLAR+ E +
Sbjct: 137 --IGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEFDSVH 193
Query: 186 TGT-----YRWMAPE------------LYS------------------------TVTLRQ 204
T +WMA E ++S TV L Q
Sbjct: 194 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 253
Query: 205 GEKKHYNHKNVRPSAENVPEELSIILTSCWKEDPNARPNFTQIIQ 249
G + ++P E P+ L ++ CW RP+F++++
Sbjct: 254 GRRL------LQP--EYCPDPLYEVMLKCWHPKAEMRPSFSELVS 290
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 116/285 (40%), Gaps = 75/285 (26%)
Query: 24 KHLFVGPR---------IGEGAHAKVYEGKY-----KNQTVAIKIVHKGETPEEIAKKES 69
+H+ +GP IG G VY G K A+K +++ E+ S
Sbjct: 19 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV----S 74
Query: 70 RFAREVAMLSRVQHRNLVKFIGAC--KEPVMVIVTELLSGGTLRKYLLN--MRPRCLDVC 125
+F E ++ H N++ +G C E ++V + G LR ++ N P D+
Sbjct: 75 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL- 133
Query: 126 VAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAE 185
IGF L +A+ M+ L S +HRDL N +L E T+K+ADFGLAR+ E +
Sbjct: 134 --IGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEFDSVH 190
Query: 186 TGT-----YRWMAPE------------LYS------------------------TVTLRQ 204
T +WMA E ++S TV L Q
Sbjct: 191 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 250
Query: 205 GEKKHYNHKNVRPSAENVPEELSIILTSCWKEDPNARPNFTQIIQ 249
G + ++P E P+ L ++ CW RP+F++++
Sbjct: 251 GRRL------LQP--EYCPDPLYEVMLKCWHPKAEMRPSFSELVS 287
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 86/170 (50%), Gaps = 9/170 (5%)
Query: 31 RIGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+IGEG + VY+ + K + VA+K + E + S RE+++L + H N+VK
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHPNIVK 68
Query: 89 FIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGII 147
+ E + +V E L L+K++ + + + + + + + HSH ++
Sbjct: 69 LLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 127
Query: 148 HRDLKPENLLLTEDLKTIKLADFGLAREESL-TEMMTAETGTYRWMAPEL 196
HRDLKPENLL+ + IKLADFGLAR + E T + APE+
Sbjct: 128 HRDLKPENLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 176
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 79/169 (46%), Gaps = 7/169 (4%)
Query: 32 IGEGAHAKVYEGKYKN--QTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+GEG A VY+ + KN Q VAIK + G E RE+ +L + H N++
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 90 IGACKEPVMV-IVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
+ A + +V + + T + ++ L + L + +E LH H I+H
Sbjct: 78 LDAFGHKSNISLVFDFME--TDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILH 135
Query: 149 RDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWM-APEL 196
RDLKP NLLL E+ +KLADFGLA+ RW APEL
Sbjct: 136 RDLKPNNLLLDEN-GVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPEL 183
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 86/170 (50%), Gaps = 9/170 (5%)
Query: 31 RIGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+IGEG + VY+ + K + VA+K + E + S RE+++L + H N+VK
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHPNIVK 67
Query: 89 FIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGII 147
+ E + +V E L L+K++ + + + + + + + HSH ++
Sbjct: 68 LLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 126
Query: 148 HRDLKPENLLLTEDLKTIKLADFGLAREESL-TEMMTAETGTYRWMAPEL 196
HRDLKPENLL+ + IKLADFGLAR + E T + APE+
Sbjct: 127 HRDLKPENLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 175
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 85/186 (45%), Gaps = 25/186 (13%)
Query: 28 VGPR------IGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRV 81
VGPR IGEGA+ V Y N +++ K +P E R RE+ +L R
Sbjct: 25 VGPRYTNLSYIGEGAYGMVCSA-YDNLN-KVRVAIKKISPFEHQTYXQRTLREIKILLRF 82
Query: 82 QHRNLVKFIGACKEPVM-----VIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+H N++ + P + V + + L L K L +C F I R
Sbjct: 83 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY---FLYQILR 139
Query: 137 AMECLHSHGIIHRDLKPENLLL--TEDLKTIKLADFGLAR----EESLTEMMTAETGTYR 190
++ +HS ++HRDLKP NLLL T DL K+ DFGLAR + T +T T
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTXDL---KICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 191 WMAPEL 196
+ APE+
Sbjct: 197 YRAPEI 202
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 85/170 (50%), Gaps = 9/170 (5%)
Query: 32 IGEGAHAKVYEGKY--KNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
IG+G AKV ++ + VA++I+ K + +K REV ++ + H N+VK
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQK---LFREVRIMKVLNHPNIVKL 78
Query: 90 IGACK-EPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
+ E + +V E SGG + YL+ R + F I A++ H I+H
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLV-AHGRMKEKEARAKFR-QIVSAVQYCHQKFIVH 136
Query: 149 RDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPELYS 198
RDLK ENLLL D+ IK+ADFG + E + + G+ + APEL+
Sbjct: 137 RDLKAENLLLDADM-NIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQ 185
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 105/233 (45%), Gaps = 39/233 (16%)
Query: 32 IGEGAHAKVYEGKYK------NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+GEG KV Y + VA+K + +G P+ S + RE+ +L + H +
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQ----LRSGWQREIEILRTLYHEH 72
Query: 86 LVKFIGACK---EPVMVIVTELLSGGTLRKYLLNMRPR-CLDVCVAIGFALDIARAMECL 141
+VK+ G C+ E + +V E + G+LR YL PR C+ + + FA I M L
Sbjct: 73 IVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL----PRHCVGLAQLLLFAQQICEGMAYL 128
Query: 142 HSHGIIHRDLKPENLLLTEDLKTIKLADFGLARE--ESLTEMMTAETGT--YRWMAPELY 197
H+ IHR L N+LL D + +K+ DFGLA+ E E G W APE
Sbjct: 129 HAQHYIHRALAARNVLLDND-RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL 187
Query: 198 STVTLRQGEKKHYNHKNVRPSAENVPEELSIILTSCWKEDPNARPN--FTQII 248
E K Y +V + E +LT C D N P+ FT++I
Sbjct: 188 K-------ECKFYYASDVWSFGVTLYE----LLTYC---DSNQSPHTKFTELI 226
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 87/171 (50%), Gaps = 11/171 (6%)
Query: 32 IGEGAHAKVYEGKY--KNQTVAIKIVHKGE-TPEEIAKKESRFAREVAMLSRVQHRNLVK 88
IG+G AKV ++ + VAIKI+ K + P + K REV ++ + H N+VK
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQK----LFREVRIMKILNHPNIVK 75
Query: 89 FIGACK-EPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGII 147
+ E + ++ E SGG + YL+ R + F I A++ H I+
Sbjct: 76 LFEVIETEKTLYLIMEYASGGEVFDYLV-AHGRMKEKEARSKFR-QIVSAVQYCHQKRIV 133
Query: 148 HRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPELYS 198
HRDLK ENLLL D+ IK+ADFG + E ++ + G+ + APEL+
Sbjct: 134 HRDLKAENLLLDADM-NIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQ 183
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 105/233 (45%), Gaps = 39/233 (16%)
Query: 32 IGEGAHAKVYEGKYK------NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+GEG KV Y + VA+K + +G P+ S + RE+ +L + H +
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQ----LRSGWQREIEILRTLYHEH 71
Query: 86 LVKFIGACK---EPVMVIVTELLSGGTLRKYLLNMRPR-CLDVCVAIGFALDIARAMECL 141
+VK+ G C+ E + +V E + G+LR YL PR C+ + + FA I M L
Sbjct: 72 IVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL----PRHCVGLAQLLLFAQQICEGMAYL 127
Query: 142 HSHGIIHRDLKPENLLLTEDLKTIKLADFGLARE--ESLTEMMTAETGT--YRWMAPELY 197
H+ IHR L N+LL D + +K+ DFGLA+ E E G W APE
Sbjct: 128 HAQHYIHRALAARNVLLDND-RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL 186
Query: 198 STVTLRQGEKKHYNHKNVRPSAENVPEELSIILTSCWKEDPNARPN--FTQII 248
E K Y +V + E +LT C D N P+ FT++I
Sbjct: 187 K-------ECKFYYASDVWSFGVTLYE----LLTYC---DSNQSPHTKFTELI 225
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 116/285 (40%), Gaps = 75/285 (26%)
Query: 24 KHLFVGPR---------IGEGAHAKVYEGKY-----KNQTVAIKIVHKGETPEEIAKKES 69
+H+ +GP IG G VY G K A+K +++ E+ S
Sbjct: 22 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV----S 77
Query: 70 RFAREVAMLSRVQHRNLVKFIGAC--KEPVMVIVTELLSGGTLRKYLLN--MRPRCLDVC 125
+F E ++ H N++ +G C E ++V + G LR ++ N P D+
Sbjct: 78 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL- 136
Query: 126 VAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAE 185
IGF L +A+ M+ L S +HRDL N +L E T+K+ADFGLAR+ E +
Sbjct: 137 --IGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKF-TVKVADFGLARDMLDKEFDSVH 193
Query: 186 TGT-----YRWMAPE------------LYS------------------------TVTLRQ 204
T +WMA E ++S TV L Q
Sbjct: 194 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 253
Query: 205 GEKKHYNHKNVRPSAENVPEELSIILTSCWKEDPNARPNFTQIIQ 249
G + ++P E P+ L ++ CW RP+F++++
Sbjct: 254 GRRL------LQP--EYCPDPLYEVMLKCWHPKAEMRPSFSELVS 290
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 86/179 (48%), Gaps = 27/179 (15%)
Query: 32 IGEGAHAKVYEGKY--KNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
IG+G AKV ++ + VA+KI+ K + +K REV ++ + H N+VK
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQK---LFREVRIMKVLNHPNIVKL 71
Query: 90 IGACK-EPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALD---------IARAME 139
+ E + +V E SGG + YL VA G+ + I A++
Sbjct: 72 FEVIETEKTLYLVMEYASGGEVFDYL-----------VAHGWMKEKEARAKFRQIVSAVQ 120
Query: 140 CLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPELYS 198
H I+HRDLK ENLLL D+ IK+ADFG + E + + G+ + APEL+
Sbjct: 121 YCHQKFIVHRDLKAENLLLDADM-NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQ 178
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 119/266 (44%), Gaps = 51/266 (19%)
Query: 22 DPKHLFVG-PRIGEGAHAKVYEGK--YKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
DPK + +IG+GA VY Q VAI+ ++ + P K+ E+ ++
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP-----KKELIINEILVM 71
Query: 79 SRVQHRNLVKFIGA-CKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARA 137
++ N+V ++ + + +V E L+GG+L + C+D + +A
Sbjct: 72 RENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQA 128
Query: 138 MECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR----EESLTEMMTAETGTYRWMA 193
+E LHS+ +IHRD+K +N+LL D ++KL DFG E+S M GT WMA
Sbjct: 129 LEFLHSNQVIHRDIKSDNILLGMD-GSVKLTDFGFCAQITPEQSKRSXM---VGTPYWMA 184
Query: 194 PELYS----------------TVTLRQGEKKHYNHKNVR----------PSAENVPEELS 227
PE+ + + + +GE + N +R P +N PE+LS
Sbjct: 185 PEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQN-PEKLS 243
Query: 228 II----LTSCWKEDPNARPNFTQIIQ 249
I L C + D R + +++Q
Sbjct: 244 AIFRDFLNRCLEMDVEKRGSAKELLQ 269
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 86/180 (47%), Gaps = 11/180 (6%)
Query: 23 PKHLFVGPRIGEGAHAKVYEGK--YKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSR 80
P+ G +GEG+ + V + ++ AIKI+ K +E K RE ++SR
Sbjct: 8 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE--NKVPYVTRERDVMSR 65
Query: 81 VQHRNLVK-FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAME 139
+ H VK + + + G L KY+ + D + +I A+E
Sbjct: 66 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALE 123
Query: 140 CLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR---EESLTEMMTAETGTYRWMAPEL 196
LH GIIHRDLKPEN+LL ED+ I++ DFG A+ ES GT ++++PEL
Sbjct: 124 YLHGKGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 182
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 86/180 (47%), Gaps = 11/180 (6%)
Query: 23 PKHLFVGPRIGEGAHAKVYEGK--YKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSR 80
P+ G +GEG+ + V + ++ AIKI+ K +E K RE ++SR
Sbjct: 9 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE--NKVPYVTRERDVMSR 66
Query: 81 VQHRNLVK-FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAME 139
+ H VK + + + G L KY+ + D + +I A+E
Sbjct: 67 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALE 124
Query: 140 CLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR---EESLTEMMTAETGTYRWMAPEL 196
LH GIIHRDLKPEN+LL ED+ I++ DFG A+ ES GT ++++PEL
Sbjct: 125 YLHGKGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 183
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 87/178 (48%), Gaps = 14/178 (7%)
Query: 31 RIGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+IGEG + V++ K + ++ VA+K V + E + S RE+ +L ++H+N+V+
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVP---SSALREICLLKELKHKNIVR 65
Query: 89 FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
+ + L+KY + LD + F + + + HS ++H
Sbjct: 66 LHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGD-LDPEIVKSFLFQLLKGLGFCHSRNVLH 124
Query: 149 RDLKPENLLLTEDLKTIKLADFGLAREESL-TEMMTAETGTYRWMAPE------LYST 199
RDLKP+NLL+ + +KLADFGLAR + +AE T + P+ LYST
Sbjct: 125 RDLKPQNLLINRN-GELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYST 181
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 99/190 (52%), Gaps = 20/190 (10%)
Query: 32 IGE-GAHAKVYEGKYKNQTV--AIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
IGE G KVY+ + K +V A K++ ++ EE+ + E+ +L+ H N+VK
Sbjct: 17 IGELGDFGKVYKAQNKETSVLAAAKVI-DTKSEEEL----EDYMVEIDILASCDHPNIVK 71
Query: 89 FIGACK-EPVMVIVTELLSGGTLRKYLLNM-RPRC-LDVCVAIGFALDIARAMECLHSHG 145
+ A E + I+ E +GG + +L + RP + V LD A+ LH +
Sbjct: 72 LLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD---ALNYLHDNK 128
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAET--GTYRWMAPELYSTVTLR 203
IIHRDLK N+L T D IKLADFG++ + + T + ++ GT WMAPE+ V
Sbjct: 129 IIHRDLKAGNILFTLD-GDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEV---VMCE 184
Query: 204 QGEKKHYNHK 213
+ + Y++K
Sbjct: 185 TSKDRPYDYK 194
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 85/174 (48%), Gaps = 11/174 (6%)
Query: 29 GPRIGEGAHAKVYEGK--YKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNL 86
G +GEG+ + V + ++ AIKI+ K +E K RE ++SR+ H
Sbjct: 35 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE--NKVPYVTRERDVMSRLDHPFF 92
Query: 87 VK-FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
VK + + + G L KY+ + D + +I A+E LH G
Sbjct: 93 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGKG 150
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAR---EESLTEMMTAETGTYRWMAPEL 196
IIHRDLKPEN+LL ED+ I++ DFG A+ ES A GT ++++PEL
Sbjct: 151 IIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANAFVGTAQYVSPEL 203
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 100/188 (53%), Gaps = 16/188 (8%)
Query: 31 RIGEGAHAK--VYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+IGEG+ K + + + IK ++ + ++ESR REVA+L+ ++H N+V+
Sbjct: 31 KIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSK-EREESR--REVAVLANMKHPNIVQ 87
Query: 89 FIGACKE-PVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGII 147
+ + +E + IV + GG L K + + + + + I A++ +H I+
Sbjct: 88 YRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKIL 147
Query: 148 HRDLKPENLLLTEDLKTIKLADFGLARE-ESLTEMMTAETGTYRWMAPELYSTVTLRQGE 206
HRD+K +N+ LT+D T++L DFG+AR S E+ A GT +++PE+ E
Sbjct: 148 HRDIKSQNIFLTKD-GTVQLGDFGIARVLNSTVELARACIGTPYYLSPEI--------CE 198
Query: 207 KKHYNHKN 214
K YN+K+
Sbjct: 199 NKPYNNKS 206
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 9/170 (5%)
Query: 31 RIGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+IGEG + VY+ + K + VA+K + E + S RE+++L + H N+VK
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHPNIVK 66
Query: 89 FIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGII 147
+ E + +V E L L+K++ + + + + + + + HSH ++
Sbjct: 67 LLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 125
Query: 148 HRDLKPENLLLTEDLKTIKLADFGLAREESL-TEMMTAETGTYRWMAPEL 196
HRDLKP+NLL+ + IKLADFGLAR + E T + APE+
Sbjct: 126 HRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 174
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 86/180 (47%), Gaps = 11/180 (6%)
Query: 23 PKHLFVGPRIGEGAHAKVYEGK--YKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSR 80
P+ G +GEG+ + V + ++ AIKI+ K +E K RE ++SR
Sbjct: 6 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE--NKVPYVTRERDVMSR 63
Query: 81 VQHRNLVK-FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAME 139
+ H VK + + + G L KY+ + D + +I A+E
Sbjct: 64 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALE 121
Query: 140 CLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR---EESLTEMMTAETGTYRWMAPEL 196
LH GIIHRDLKPEN+LL ED+ I++ DFG A+ ES GT ++++PEL
Sbjct: 122 YLHGKGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 180
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 9/170 (5%)
Query: 31 RIGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+IGEG + VY+ + K + VA+K + E + S RE+++L + H N+VK
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHPNIVK 68
Query: 89 FIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGII 147
+ E + +V E L L+K++ + + + + + + + HSH ++
Sbjct: 69 LLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 127
Query: 148 HRDLKPENLLLTEDLKTIKLADFGLAREESL-TEMMTAETGTYRWMAPEL 196
HRDLKP+NLL+ + IKLADFGLAR + E T + APE+
Sbjct: 128 HRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 176
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 9/170 (5%)
Query: 31 RIGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+IGEG + VY+ + K + VA+K + E + S RE+++L + H N+VK
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHPNIVK 65
Query: 89 FIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGII 147
+ E + +V E L L+K++ + + + + + + + HSH ++
Sbjct: 66 LLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 124
Query: 148 HRDLKPENLLLTEDLKTIKLADFGLAREESL-TEMMTAETGTYRWMAPEL 196
HRDLKP+NLL+ + IKLADFGLAR + E T + APE+
Sbjct: 125 HRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 173
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 86/180 (47%), Gaps = 11/180 (6%)
Query: 23 PKHLFVGPRIGEGAHAKVYEGK--YKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSR 80
P+ G +GEG+ + V + ++ AIKI+ K +E K RE ++SR
Sbjct: 7 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE--NKVPYVTRERDVMSR 64
Query: 81 VQHRNLVK-FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAME 139
+ H VK + + + G L KY+ + D + +I A+E
Sbjct: 65 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALE 122
Query: 140 CLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR---EESLTEMMTAETGTYRWMAPEL 196
LH GIIHRDLKPEN+LL ED+ I++ DFG A+ ES GT ++++PEL
Sbjct: 123 YLHGKGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 181
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 9/170 (5%)
Query: 31 RIGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+IGEG + VY+ + K + VA+K + E + S RE+++L + H N+VK
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHPNIVK 69
Query: 89 FIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGII 147
+ E + +V E L L+K++ + + + + + + + HSH ++
Sbjct: 70 LLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 128
Query: 148 HRDLKPENLLLTEDLKTIKLADFGLAREESL-TEMMTAETGTYRWMAPEL 196
HRDLKP+NLL+ + IKLADFGLAR + E T + APE+
Sbjct: 129 HRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 177
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 9/170 (5%)
Query: 31 RIGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+IGEG + VY+ + K + VA+K + E + S RE+++L + H N+VK
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHPNIVK 68
Query: 89 FIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGII 147
+ E + +V E L L+K++ + + + + + + + HSH ++
Sbjct: 69 LLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 127
Query: 148 HRDLKPENLLLTEDLKTIKLADFGLAREESL-TEMMTAETGTYRWMAPEL 196
HRDLKP+NLL+ + IKLADFGLAR + E T + APE+
Sbjct: 128 HRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 176
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 9/170 (5%)
Query: 31 RIGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+IGEG + VY+ + K + VA+K + E + S RE+++L + H N+VK
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHPNIVK 65
Query: 89 FIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGII 147
+ E + +V E L L+K++ + + + + + + + HSH ++
Sbjct: 66 LLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 124
Query: 148 HRDLKPENLLLTEDLKTIKLADFGLAREESL-TEMMTAETGTYRWMAPEL 196
HRDLKP+NLL+ + IKLADFGLAR + E T + APE+
Sbjct: 125 HRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 173
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 9/170 (5%)
Query: 31 RIGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+IGEG + VY+ + K + VA+K + E + S RE+++L + H N+VK
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHPNIVK 66
Query: 89 FIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGII 147
+ E + +V E L L+K++ + + + + + + + HSH ++
Sbjct: 67 LLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 125
Query: 148 HRDLKPENLLLTEDLKTIKLADFGLAREESL-TEMMTAETGTYRWMAPEL 196
HRDLKP+NLL+ + IKLADFGLAR + E T + APE+
Sbjct: 126 HRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 174
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 118/266 (44%), Gaps = 51/266 (19%)
Query: 22 DPKHLFVG-PRIGEGAHAKVYEGK--YKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
DPK + +IG+GA VY Q VAI+ ++ + P K+ E+ ++
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP-----KKELIINEILVM 71
Query: 79 SRVQHRNLVKFIGA-CKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARA 137
++ N+V ++ + + +V E L+GG+L + C+D + +A
Sbjct: 72 RENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQA 128
Query: 138 MECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR----EESLTEMMTAETGTYRWMA 193
+E LHS+ +IHRD+K +N+LL D ++KL DFG E+S M GT WMA
Sbjct: 129 LEFLHSNQVIHRDIKSDNILLGMD-GSVKLTDFGFCAQITPEQSKRSTM---VGTPYWMA 184
Query: 194 PELYS----------------TVTLRQGEKKHYNHKNVR----------PSAENVPEELS 227
PE+ + + + +GE + N +R P +N PE+LS
Sbjct: 185 PEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQN-PEKLS 243
Query: 228 II----LTSCWKEDPNARPNFTQIIQ 249
I L C D R + +++Q
Sbjct: 244 AIFRDFLNRCLDMDVEKRGSAKELLQ 269
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 9/170 (5%)
Query: 31 RIGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+IGEG + VY+ + K + VA+K + E + S RE+++L + H N+VK
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHPNIVK 67
Query: 89 FIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGII 147
+ E + +V E L L+K++ + + + + + + + HSH ++
Sbjct: 68 LLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 126
Query: 148 HRDLKPENLLLTEDLKTIKLADFGLAREESL-TEMMTAETGTYRWMAPEL 196
HRDLKP+NLL+ + IKLADFGLAR + E T + APE+
Sbjct: 127 HRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 175
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 9/170 (5%)
Query: 31 RIGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+IGEG + VY+ + K + VA+K + E + S RE+++L + H N+VK
Sbjct: 14 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHPNIVK 70
Query: 89 FIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGII 147
+ E + +V E L L+K++ + + + + + + + HSH ++
Sbjct: 71 LLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 129
Query: 148 HRDLKPENLLLTEDLKTIKLADFGLAREESL-TEMMTAETGTYRWMAPEL 196
HRDLKP+NLL+ + IKLADFGLAR + E T + APE+
Sbjct: 130 HRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 178
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 9/170 (5%)
Query: 31 RIGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+IGEG + VY+ + K + VA+K + E + S RE+++L + H N+VK
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHPNIVK 66
Query: 89 FIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGII 147
+ E + +V E L L+K++ + + + + + + + HSH ++
Sbjct: 67 LLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 125
Query: 148 HRDLKPENLLLTEDLKTIKLADFGLAREESL-TEMMTAETGTYRWMAPEL 196
HRDLKP+NLL+ + IKLADFGLAR + E T + APE+
Sbjct: 126 HRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 174
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 9/170 (5%)
Query: 31 RIGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+IGEG + VY+ + K + VA+ + E + S RE+++L + H N+VK
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVP---STAIREISLLKELNHPNIVK 66
Query: 89 FIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGII 147
+ E + +V E L L+K++ + + + + + + + HSH ++
Sbjct: 67 LLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 125
Query: 148 HRDLKPENLLLTEDLKTIKLADFGLAREESL-TEMMTAETGTYRWMAPEL 196
HRDLKP+NLL+ + IKLADFGLAR + T E T + APE+
Sbjct: 126 HRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 174
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 9/170 (5%)
Query: 31 RIGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+IGEG + VY+ + K + VA+ + E + S RE+++L + H N+VK
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVP---STAIREISLLKELNHPNIVK 65
Query: 89 FIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGII 147
+ E + +V E L L+K++ + + + + + + + HSH ++
Sbjct: 66 LLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 124
Query: 148 HRDLKPENLLLTEDLKTIKLADFGLAREESL-TEMMTAETGTYRWMAPEL 196
HRDLKP+NLL+ + IKLADFGLAR + T E T + APE+
Sbjct: 125 HRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 173
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 9/170 (5%)
Query: 31 RIGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+IGEG + VY+ + K + VA+K + E + S RE+++L + H N+VK
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHPNIVK 69
Query: 89 FIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGII 147
+ E + +V E L L+K++ + + + + + + + HSH ++
Sbjct: 70 LLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 128
Query: 148 HRDLKPENLLLTEDLKTIKLADFGLAREESL-TEMMTAETGTYRWMAPEL 196
HRDLKP+NLL+ + IKLADFGLAR + E T + APE+
Sbjct: 129 HRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 177
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 9/170 (5%)
Query: 31 RIGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+IGEG + VY+ + K + VA+K + E + S RE+++L + H N+VK
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHPNIVK 67
Query: 89 FIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGII 147
+ E + +V E L L+K++ + + + + + + + HSH ++
Sbjct: 68 LLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 126
Query: 148 HRDLKPENLLLTEDLKTIKLADFGLAREESL-TEMMTAETGTYRWMAPEL 196
HRDLKP+NLL+ + IKLADFGLAR + E T + APE+
Sbjct: 127 HRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 175
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 9/170 (5%)
Query: 31 RIGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+IGEG + VY+ + K + VA+K + E + S RE+++L + H N+VK
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHPNIVK 66
Query: 89 FIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGII 147
+ E + +V E L L+K++ + + + + + + + HSH ++
Sbjct: 67 LLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 125
Query: 148 HRDLKPENLLLTEDLKTIKLADFGLAREESL-TEMMTAETGTYRWMAPEL 196
HRDLKP+NLL+ + IKLADFGLAR + E T + APE+
Sbjct: 126 HRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 174
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 85/186 (45%), Gaps = 25/186 (13%)
Query: 28 VGPR------IGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRV 81
VGPR IGEGA+ V Y N +++ K +P E R RE+ +L R
Sbjct: 21 VGPRYTNLSYIGEGAYGMVCSA-YDNVN-KVRVAIKKISPFEHQTYCQRTLREIKILLRF 78
Query: 82 QHRNLVKFIGACKEPVM-----VIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+H N++ + P + V + + L L K L +C F I R
Sbjct: 79 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY---FLYQILR 135
Query: 137 AMECLHSHGIIHRDLKPENLLL--TEDLKTIKLADFGLAR----EESLTEMMTAETGTYR 190
++ +HS ++HRDLKP NLLL T DL K+ DFGLAR + T +T T
Sbjct: 136 GLKYIHSANVLHRDLKPSNLLLNTTXDL---KICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 191 WMAPEL 196
+ APE+
Sbjct: 193 YRAPEI 198
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 85/186 (45%), Gaps = 25/186 (13%)
Query: 28 VGPR------IGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRV 81
VGPR IGEGA+ V Y N +++ K +P E R RE+ +L R
Sbjct: 21 VGPRYTNLSYIGEGAYGMVCSA-YDNVN-KVRVAIKKISPFEHQTYCQRTLREIKILLRF 78
Query: 82 QHRNLVKFIGACKEPVM-----VIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+H N++ + P + V + + L L K L +C F I R
Sbjct: 79 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY---FLYQILR 135
Query: 137 AMECLHSHGIIHRDLKPENLLL--TEDLKTIKLADFGLAR----EESLTEMMTAETGTYR 190
++ +HS ++HRDLKP NLLL T DL K+ DFGLAR + T +T T
Sbjct: 136 GLKYIHSANVLHRDLKPSNLLLNTTXDL---KICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 191 WMAPEL 196
+ APE+
Sbjct: 193 YRAPEI 198
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 85/186 (45%), Gaps = 25/186 (13%)
Query: 28 VGPR------IGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRV 81
VGPR IGEGA+ V Y N +++ K +P E R RE+ +L R
Sbjct: 25 VGPRYTNLSYIGEGAYGMVCSA-YDNLN-KVRVAIKKISPFEHQTYCQRTLREIKILLRF 82
Query: 82 QHRNLVKFIGACKEPVM-----VIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+H N++ + P + V + + L L K L +C F I R
Sbjct: 83 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY---FLYQILR 139
Query: 137 AMECLHSHGIIHRDLKPENLLL--TEDLKTIKLADFGLAR----EESLTEMMTAETGTYR 190
++ +HS ++HRDLKP NLLL T DL K+ DFGLAR + T +T T
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTXDL---KICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 191 WMAPEL 196
+ APE+
Sbjct: 197 YRAPEI 202
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 9/170 (5%)
Query: 31 RIGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+IGEG + VY+ + K + VA+K + E + S RE+++L + H N+VK
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHPNIVK 69
Query: 89 FIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGII 147
+ E + +V E LS L+ ++ + + + + + + + HSH ++
Sbjct: 70 LLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 128
Query: 148 HRDLKPENLLLTEDLKTIKLADFGLAREESL-TEMMTAETGTYRWMAPEL 196
HRDLKP+NLL+ + IKLADFGLAR + E T + APE+
Sbjct: 129 HRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 177
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 85/186 (45%), Gaps = 25/186 (13%)
Query: 28 VGPR------IGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRV 81
VGPR IGEGA+ V Y N +++ K +P E R RE+ +L R
Sbjct: 21 VGPRYTNLSYIGEGAYGMVCSA-YDNVN-KVRVAIKKISPFEHQTYCQRTLREIKILLRF 78
Query: 82 QHRNLVKFIGACKEPVM-----VIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+H N++ + P + V + + L L K L +C F I R
Sbjct: 79 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY---FLYQILR 135
Query: 137 AMECLHSHGIIHRDLKPENLLL--TEDLKTIKLADFGLAR----EESLTEMMTAETGTYR 190
++ +HS ++HRDLKP NLLL T DL K+ DFGLAR + T +T T
Sbjct: 136 GLKYIHSANVLHRDLKPSNLLLNTTXDL---KIXDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 191 WMAPEL 196
+ APE+
Sbjct: 193 YRAPEI 198
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 9/170 (5%)
Query: 31 RIGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+IGEG + VY+ + K + VA+K + E + S RE+++L + H N+VK
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHPNIVK 68
Query: 89 FIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGII 147
+ E + +V E LS L+ ++ + + + + + + + HSH ++
Sbjct: 69 LLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 127
Query: 148 HRDLKPENLLLTEDLKTIKLADFGLAREESL-TEMMTAETGTYRWMAPEL 196
HRDLKP+NLL+ + IKLADFGLAR + E T + APE+
Sbjct: 128 HRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 176
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 92/191 (48%), Gaps = 17/191 (8%)
Query: 32 IGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+G+GA A V+ G++K AIK+ + + + RE +L ++ H+N+VK
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ----MREFEVLKKLNHKNIVKL 72
Query: 90 IGACKEPVM---VIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFAL---DIARAMECLHS 143
+E V++ E G+L Y + P F + D+ M L
Sbjct: 73 FAIEEETTTRHKVLIMEFCPCGSL--YTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE 130
Query: 144 HGIIHRDLKPENLL--LTEDLKTI-KLADFGLAREESLTEMMTAETGTYRWMAPELYSTV 200
+GI+HR++KP N++ + ED +++ KL DFG ARE E + GT ++ P++Y
Sbjct: 131 NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERA 190
Query: 201 TLRQGEKKHYN 211
LR+ +K Y
Sbjct: 191 VLRKDHQKKYG 201
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 85/174 (48%), Gaps = 11/174 (6%)
Query: 29 GPRIGEGAHAKVYEGK--YKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNL 86
G +GEG+ + V + ++ AIKI+ K +E K RE ++SR+ H
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE--NKVPYVTRERDVMSRLDHPFF 94
Query: 87 VK-FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
VK + + + G L KY+ + D + +I A+E LH G
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGKG 152
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAR---EESLTEMMTAETGTYRWMAPEL 196
IIHRDLKPEN+LL ED+ I++ DFG A+ ES + GT ++++PEL
Sbjct: 153 IIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 205
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 85/174 (48%), Gaps = 11/174 (6%)
Query: 29 GPRIGEGAHAKVYEGK--YKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNL 86
G +GEG+ + V + ++ AIKI+ K +E K RE ++SR+ H
Sbjct: 34 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE--NKVPYVTRERDVMSRLDHPFF 91
Query: 87 VK-FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
VK + + + G L KY+ + D + +I A+E LH G
Sbjct: 92 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGKG 149
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAR---EESLTEMMTAETGTYRWMAPEL 196
IIHRDLKPEN+LL ED+ I++ DFG A+ ES + GT ++++PEL
Sbjct: 150 IIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 202
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 85/174 (48%), Gaps = 11/174 (6%)
Query: 29 GPRIGEGAHAKVYEGK--YKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNL 86
G +GEG+ + V + ++ AIKI+ K +E K RE ++SR+ H
Sbjct: 38 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE--NKVPYVTRERDVMSRLDHPFF 95
Query: 87 VK-FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
VK + + + G L KY+ + D + +I A+E LH G
Sbjct: 96 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGKG 153
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAR---EESLTEMMTAETGTYRWMAPEL 196
IIHRDLKPEN+LL ED+ I++ DFG A+ ES + GT ++++PEL
Sbjct: 154 IIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 206
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 119/266 (44%), Gaps = 51/266 (19%)
Query: 22 DPKHLFVG-PRIGEGAHAKVYEGK--YKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
DPK + +IG+GA VY Q VAI+ ++ + P K+ E+ ++
Sbjct: 18 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP-----KKELIINEILVM 72
Query: 79 SRVQHRNLVKFIGA-CKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARA 137
++ N+V ++ + + +V E L+GG+L + C+D + +A
Sbjct: 73 RENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQA 129
Query: 138 MECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR----EESLTEMMTAETGTYRWMA 193
+E LHS+ +IHR++K +N+LL D ++KL DFG E+S M GT WMA
Sbjct: 130 LEFLHSNQVIHRNIKSDNILLGMD-GSVKLTDFGFCAQITPEQSKRSTM---VGTPYWMA 185
Query: 194 PELYS----------------TVTLRQGEKKHYNHKNVR----------PSAENVPEELS 227
PE+ + + + +GE + N +R P +N PE+LS
Sbjct: 186 PEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQN-PEKLS 244
Query: 228 II----LTSCWKEDPNARPNFTQIIQ 249
I L C + D R + ++IQ
Sbjct: 245 AIFRDFLNRCLEMDVEKRGSAKELIQ 270
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 83/184 (45%), Gaps = 21/184 (11%)
Query: 28 VGPR------IGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRV 81
VGPR IGEGA+ V Y N +++ K +P E R RE+ +L R
Sbjct: 19 VGPRYTNLSYIGEGAYGMVCSA-YDNLN-KVRVAIKKISPFEHQTYCQRTLREIKILLRF 76
Query: 82 QHRNLVKFIGACKEPVM-----VIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+H N++ + P + V + + L L K L +C F I R
Sbjct: 77 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY---FLYQILR 133
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR----EESLTEMMTAETGTYRWM 192
++ +HS ++HRDLKP NLLL +K+ DFGLAR + T +T T +
Sbjct: 134 GLKYIHSANVLHRDLKPSNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVATRWYR 192
Query: 193 APEL 196
APE+
Sbjct: 193 APEI 196
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 83/184 (45%), Gaps = 21/184 (11%)
Query: 28 VGPR------IGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRV 81
VGPR IGEGA+ V Y N +++ K +P E R RE+ +L R
Sbjct: 26 VGPRYTNLSYIGEGAYGMVCSA-YDNLN-KVRVAIKKISPFEHQTYCQRTLREIKILLRF 83
Query: 82 QHRNLVKFIGACKEPVM-----VIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+H N++ + P + V + + L L K L +C F I R
Sbjct: 84 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY---FLYQILR 140
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR----EESLTEMMTAETGTYRWM 192
++ +HS ++HRDLKP NLLL +K+ DFGLAR + T +T T +
Sbjct: 141 GLKYIHSANVLHRDLKPSNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVATRWYR 199
Query: 193 APEL 196
APE+
Sbjct: 200 APEI 203
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 83/184 (45%), Gaps = 21/184 (11%)
Query: 28 VGPR------IGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRV 81
VGPR IGEGA+ V Y N +++ K +P E R RE+ +L R
Sbjct: 27 VGPRYTNLSYIGEGAYGMVCSA-YDNLN-KVRVAIKKISPFEHQTYCQRTLREIKILLRF 84
Query: 82 QHRNLVKFIGACKEPVM-----VIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+H N++ + P + V + + L L K L +C F I R
Sbjct: 85 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY---FLYQILR 141
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR----EESLTEMMTAETGTYRWM 192
++ +HS ++HRDLKP NLLL +K+ DFGLAR + T +T T +
Sbjct: 142 GLKYIHSANVLHRDLKPSNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVATRWYR 200
Query: 193 APEL 196
APE+
Sbjct: 201 APEI 204
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 83/184 (45%), Gaps = 21/184 (11%)
Query: 28 VGPR------IGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRV 81
VGPR IGEGA+ V Y N +++ K +P E R RE+ +L R
Sbjct: 18 VGPRYTNLSYIGEGAYGMVCSA-YDNLN-KVRVAIKKISPFEHQTYCQRTLREIKILLRF 75
Query: 82 QHRNLVKFIGACKEPVM-----VIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+H N++ + P + V + + L L K L +C F I R
Sbjct: 76 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY---FLYQILR 132
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR----EESLTEMMTAETGTYRWM 192
++ +HS ++HRDLKP NLLL +K+ DFGLAR + T +T T +
Sbjct: 133 GLKYIHSANVLHRDLKPSNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVATRWYR 191
Query: 193 APEL 196
APE+
Sbjct: 192 APEI 195
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 83/184 (45%), Gaps = 21/184 (11%)
Query: 28 VGPR------IGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRV 81
VGPR IGEGA+ V Y N +++ K +P E R RE+ +L R
Sbjct: 25 VGPRYTNLSYIGEGAYGMVCSA-YDNLN-KVRVAIKKISPFEHQTYCQRTLREIKILLRF 82
Query: 82 QHRNLVKFIGACKEPVM-----VIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+H N++ + P + V + + L L K L +C F I R
Sbjct: 83 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY---FLYQILR 139
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR----EESLTEMMTAETGTYRWM 192
++ +HS ++HRDLKP NLLL +K+ DFGLAR + T +T T +
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVATRWYR 198
Query: 193 APEL 196
APE+
Sbjct: 199 APEI 202
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 85/170 (50%), Gaps = 9/170 (5%)
Query: 31 RIGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+IGEG + VY+ + K + VA+K + E + S RE+++L + H N+VK
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHPNIVK 66
Query: 89 FIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGII 147
+ E + +V E L L+ ++ + + + + + + + HSH ++
Sbjct: 67 LLDVIHTENKLYLVFEFLHQD-LKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 125
Query: 148 HRDLKPENLLLTEDLKTIKLADFGLAREESL-TEMMTAETGTYRWMAPEL 196
HRDLKPENLL+ + IKLADFGLAR + E T + APE+
Sbjct: 126 HRDLKPENLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 174
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 83/184 (45%), Gaps = 21/184 (11%)
Query: 28 VGPR------IGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRV 81
VGPR IGEGA+ V Y N +++ K +P E R RE+ +L R
Sbjct: 21 VGPRYTNLSYIGEGAYGMVCSA-YDNVN-KVRVAIKKISPFEHQTYCQRTLREIKILLRF 78
Query: 82 QHRNLVKFIGACKEPVM-----VIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+H N++ + P + V + + L L K L +C F I R
Sbjct: 79 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY---FLYQILR 135
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR----EESLTEMMTAETGTYRWM 192
++ +HS ++HRDLKP NLLL +K+ DFGLAR + T +T T +
Sbjct: 136 GLKYIHSANVLHRDLKPSNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVATRWYR 194
Query: 193 APEL 196
APE+
Sbjct: 195 APEI 198
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 83/184 (45%), Gaps = 21/184 (11%)
Query: 28 VGPR------IGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRV 81
VGPR IGEGA+ V Y N +++ K +P E R RE+ +L R
Sbjct: 19 VGPRYTNLSYIGEGAYGMVCSA-YDNLN-KVRVAIKKISPFEHQTYCQRTLREIKILLRF 76
Query: 82 QHRNLVKFIGACKEPVM-----VIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+H N++ + P + V + + L L K L +C F I R
Sbjct: 77 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY---FLYQILR 133
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR----EESLTEMMTAETGTYRWM 192
++ +HS ++HRDLKP NLLL +K+ DFGLAR + T +T T +
Sbjct: 134 GLKYIHSANVLHRDLKPSNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVATRWYR 192
Query: 193 APEL 196
APE+
Sbjct: 193 APEI 196
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 93/176 (52%), Gaps = 10/176 (5%)
Query: 27 FVGPRI-GEGAHAKVY--EGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQH 83
+ G R+ G+G+ +V + K Q A+K++ K + ++ K+ REV +L ++ H
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKES--LLREVQLLKQLDH 85
Query: 84 RNLVKFIGACKEP-VMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLH 142
N++K ++ +V E+ +GG L +++ R R +V A + + +H
Sbjct: 86 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIIS-RKRFSEVDAA-RIIRQVLSGITYMH 143
Query: 143 SHGIIHRDLKPENLLLTEDLK--TIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+ I+HRDLKPENLLL K I++ DFGL+ ++ M + GT ++APE+
Sbjct: 144 KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEV 199
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 83/184 (45%), Gaps = 21/184 (11%)
Query: 28 VGPR------IGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRV 81
VGPR IGEGA+ V Y N +++ K +P E R RE+ +L R
Sbjct: 23 VGPRYTNLSYIGEGAYGMVCSA-YDNVN-KVRVAIKKISPFEHQTYCQRTLREIKILLRF 80
Query: 82 QHRNLVKFIGACKEPVM-----VIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+H N++ + P + V + + L L K L +C F I R
Sbjct: 81 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY---FLYQILR 137
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR----EESLTEMMTAETGTYRWM 192
++ +HS ++HRDLKP NLLL +K+ DFGLAR + T +T T +
Sbjct: 138 GLKYIHSANVLHRDLKPSNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVATRWYR 196
Query: 193 APEL 196
APE+
Sbjct: 197 APEI 200
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 92/173 (53%), Gaps = 16/173 (9%)
Query: 32 IGEGAHAKVYEGKYKNQTV--AIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLV-- 87
IG+G+ KV ++K + V A+K++ K ++ +K R V +L V+H LV
Sbjct: 46 IGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNV-LLKNVKHPFLVGL 104
Query: 88 --KFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
F A K + V + ++GG L +L R RC A +A +IA A+ LHS
Sbjct: 105 HFSFQTADK---LYFVLDYINGGELFYHL--QRERCFLEPRARFYAAEIASALGYLHSLN 159
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAET--GTYRWMAPEL 196
I++RDLKPEN+LL + I L DFGL + E++ T T GT ++APE+
Sbjct: 160 IVYRDLKPENILL-DSQGHIVLTDFGLCK-ENIEHNSTTSTFCGTPEYLAPEV 210
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 93/176 (52%), Gaps = 10/176 (5%)
Query: 27 FVGPRI-GEGAHAKVY--EGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQH 83
+ G R+ G+G+ +V + K Q A+K++ K + ++ K+ REV +L ++ H
Sbjct: 34 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKES--LLREVQLLKQLDH 91
Query: 84 RNLVKFIGACKEP-VMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLH 142
N++K ++ +V E+ +GG L +++ R R +V A + + +H
Sbjct: 92 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIIS-RKRFSEVDAA-RIIRQVLSGITYMH 149
Query: 143 SHGIIHRDLKPENLLLTEDLK--TIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+ I+HRDLKPENLLL K I++ DFGL+ ++ M + GT ++APE+
Sbjct: 150 KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEV 205
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 17/191 (8%)
Query: 32 IGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+G+GA A V+ G++K AIK+ + + + RE +L ++ H+N+VK
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ----MREFEVLKKLNHKNIVKL 72
Query: 90 IGACKEPVM---VIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFAL---DIARAMECLHS 143
+E V++ E G+L Y + P F + D+ M L
Sbjct: 73 FAIEEETTTRHKVLIMEFCPCGSL--YTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE 130
Query: 144 HGIIHRDLKPENLL--LTEDLKTI-KLADFGLAREESLTEMMTAETGTYRWMAPELYSTV 200
+GI+HR++KP N++ + ED +++ KL DFG ARE E GT ++ P++Y
Sbjct: 131 NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDMYERA 190
Query: 201 TLRQGEKKHYN 211
LR+ +K Y
Sbjct: 191 VLRKDHQKKYG 201
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 10/170 (5%)
Query: 32 IGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+G+G+ +V + K + Q A+K+++K K S REV +L ++ H N++K
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKN---KDTSTILREVELLKKLDHPNIMKL 86
Query: 90 IGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
++ IV EL +GG L ++ R R + A + + +H H I+H
Sbjct: 87 FEILEDSSSFYIVGELYTGGELFDEIIK-RKRFSEHDAA-RIIKQVFSGITYMHKHNIVH 144
Query: 149 RDLKPENLLLTEDLK--TIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
RDLKPEN+LL K IK+ DFGL+ M GT ++APE+
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEV 194
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 83/184 (45%), Gaps = 21/184 (11%)
Query: 28 VGPR------IGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRV 81
VGPR IGEGA+ V Y N +++ K +P E R RE+ +L R
Sbjct: 29 VGPRYTNLSYIGEGAYGMVCSA-YDNVN-KVRVAIKKISPFEHQTYCQRTLREIKILLRF 86
Query: 82 QHRNLVKFIGACKEPVM-----VIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+H N++ + P + V + + L L K L +C F I R
Sbjct: 87 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY---FLYQILR 143
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR----EESLTEMMTAETGTYRWM 192
++ +HS ++HRDLKP NLLL +K+ DFGLAR + T +T T +
Sbjct: 144 GLKYIHSANVLHRDLKPSNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVATRWYR 202
Query: 193 APEL 196
APE+
Sbjct: 203 APEI 206
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 83/184 (45%), Gaps = 21/184 (11%)
Query: 28 VGPR------IGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRV 81
VGPR IGEGA+ V Y N +++ K +P E R RE+ +L R
Sbjct: 21 VGPRYTNLSYIGEGAYGMVCSA-YDNVN-KVRVAIKKISPFEHQTYCQRTLREIKILLRF 78
Query: 82 QHRNLVKFIGACKEPVM-----VIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+H N++ + P + V + + L L K L +C F I R
Sbjct: 79 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY---FLYQILR 135
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR----EESLTEMMTAETGTYRWM 192
++ +HS ++HRDLKP NLLL +K+ DFGLAR + T +T T +
Sbjct: 136 GLKYIHSANVLHRDLKPSNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVATRWYR 194
Query: 193 APEL 196
APE+
Sbjct: 195 APEI 198
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 86/179 (48%), Gaps = 21/179 (11%)
Query: 29 GPRIGEGAHAKVYEGKYKNQTVAIKIVHK--GETPEEIAKKESRFAREVAMLSRVQHRNL 86
G + GEG VY+G N TVA+K + T EE+ + +F +E+ + ++ QH NL
Sbjct: 27 GNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQ---QFDQEIKVXAKCQHENL 83
Query: 87 VKFIGACKE-PVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGF------ALDIARAME 139
V+ +G + + +V G+L R CLD + + A A +
Sbjct: 84 VELLGFSSDGDDLCLVYVYXPNGSLLD-----RLSCLDGTPPLSWHXRCKIAQGAANGIN 138
Query: 140 CLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR-EESLTEMMTAE--TGTYRWMAPE 195
LH + IHRD+K N+LL E T K++DFGLAR E + + GT + APE
Sbjct: 139 FLHENHHIHRDIKSANILLDEAF-TAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPE 196
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 77/130 (59%), Gaps = 8/130 (6%)
Query: 73 REVAMLSRVQHRNLVKFIGACKEPV---MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIG 129
+E+A+L ++ H N+VK + +P + +V EL++ G + + + ++P D A
Sbjct: 85 QEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME-VPTLKPLSEDQ--ARF 141
Query: 130 FALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAET-GT 188
+ D+ + +E LH IIHRD+KP NLL+ ED IK+ADFG++ E ++ + + T GT
Sbjct: 142 YFQDLIKGIEYLHYQKIIHRDIKPSNLLVGED-GHIKIADFGVSNEFKGSDALLSNTVGT 200
Query: 189 YRWMAPELYS 198
+MAPE S
Sbjct: 201 PAFMAPESLS 210
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 121/284 (42%), Gaps = 44/284 (15%)
Query: 5 SRFYLADELKLDAKWLIDPKHLFVGP-RIGEGAHAKVYEGKY----KNQTVAIKIVHKGE 59
S F +ELK D K + +L + +G G V +G Y K VAIK++ +G
Sbjct: 317 SPFSDPEELK-DKKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT 375
Query: 60 TPEEIAKKESRFAREVAMLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRP 119
E A E RE ++ ++ + +V+ IG C+ +++V E+ GG L K+L+ R
Sbjct: 376 ---EKADTEE-MMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKRE 431
Query: 120 RCLDVCVAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR----E 175
+ V ++ M+ L +HR+L N+LL + K++DFGL++ +
Sbjct: 432 E-IPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLV-NRHYAKISDFGLSKALGAD 489
Query: 176 ESLTEMMTAETGTYRWMAPEL-----YSTVT------------LRQGEKKHYNHKNVRPS 218
+S +A +W APE +S+ + L G+K + K
Sbjct: 490 DSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVM 549
Query: 219 A-----------ENVPEELSIILTSCWKEDPNARPNFTQIIQML 251
A P EL +++ CW RP+F + Q +
Sbjct: 550 AFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRM 593
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 83/184 (45%), Gaps = 21/184 (11%)
Query: 28 VGPR------IGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRV 81
VGPR IGEGA+ V Y N +++ K +P E R RE+ +L R
Sbjct: 41 VGPRYTNLSYIGEGAYGMVCSA-YDNVN-KVRVAIKKISPFEHQTYCQRTLREIKILLRF 98
Query: 82 QHRNLVKFIGACKEPVM-----VIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+H N++ + P + V + + L L K L +C F I R
Sbjct: 99 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY---FLYQILR 155
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR----EESLTEMMTAETGTYRWM 192
++ +HS ++HRDLKP NLLL +K+ DFGLAR + T +T T +
Sbjct: 156 GLKYIHSANVLHRDLKPSNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVATRWYR 214
Query: 193 APEL 196
APE+
Sbjct: 215 APEI 218
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 92/184 (50%), Gaps = 17/184 (9%)
Query: 22 DPKHLFVGPRIGEGAHAKVY-----EGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVA 76
DP + +G+G+ KV+ G Q A+K++ K + R E
Sbjct: 22 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLK---VRDRVRTKMERD 78
Query: 77 MLSRVQHRNLVKFIGACK-EPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFAL-DI 134
+L V H +VK A + E + ++ + L GG L + + + F L ++
Sbjct: 79 ILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL---FTRLSKEVMFTEEDVKFYLAEL 135
Query: 135 ARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAET--GTYRWM 192
A A++ LHS GII+RDLKPEN+LL E+ IKL DFGL++ ES+ A + GT +M
Sbjct: 136 ALALDHLHSLGIIYRDLKPENILLDEE-GHIKLTDFGLSK-ESIDHEKKAYSFCGTVEYM 193
Query: 193 APEL 196
APE+
Sbjct: 194 APEV 197
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 93/176 (52%), Gaps = 10/176 (5%)
Query: 27 FVGPRI-GEGAHAKVY--EGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQH 83
+ G R+ G+G+ +V + K Q A+K++ K + ++ K+ REV +L ++ H
Sbjct: 51 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKES--LLREVQLLKQLDH 108
Query: 84 RNLVKFIGACKEP-VMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLH 142
N++K ++ +V E+ +GG L +++ R R +V A + + +H
Sbjct: 109 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIIS-RKRFSEVDAA-RIIRQVLSGITYMH 166
Query: 143 SHGIIHRDLKPENLLLTEDLK--TIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+ I+HRDLKPENLLL K I++ DFGL+ ++ M + GT ++APE+
Sbjct: 167 KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEV 222
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 84/174 (48%), Gaps = 11/174 (6%)
Query: 29 GPRIGEGAHAKVYEGK--YKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNL 86
G +GEG+ + V + ++ AIKI+ K +E K RE ++SR+ H
Sbjct: 19 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE--NKVPYVTRERDVMSRLDHPFF 76
Query: 87 VK-FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
VK + + + G L KY+ + D + +I A+E LH G
Sbjct: 77 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGKG 134
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAR---EESLTEMMTAETGTYRWMAPEL 196
IIHRDLKPEN+LL ED+ I++ DFG A+ ES GT ++++PEL
Sbjct: 135 IIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 187
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 84/174 (48%), Gaps = 11/174 (6%)
Query: 29 GPRIGEGAHAKVYEGK--YKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNL 86
G +GEG+ + V + ++ AIKI+ K +E K RE ++SR+ H
Sbjct: 38 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE--NKVPYVTRERDVMSRLDHPFF 95
Query: 87 VK-FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
VK + + + G L KY+ + D + +I A+E LH G
Sbjct: 96 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGKG 153
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAR---EESLTEMMTAETGTYRWMAPEL 196
IIHRDLKPEN+LL ED+ I++ DFG A+ ES GT ++++PEL
Sbjct: 154 IIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 206
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 96/192 (50%), Gaps = 18/192 (9%)
Query: 21 IDPKHLF-VGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLS 79
+DP ++ + +G+GA KVY+ K K +T A+ ET E ++ + E+ +L+
Sbjct: 7 LDPNEVWEIVGELGDGAFGKVYKAKNK-ETGALAAAKVIETKSE--EELEDYIVEIEILA 63
Query: 80 RVQHRNLVKFIGAC-KEPVMVIVTELLSGGTLRKYLLNM-----RPRCLDVCVAIGFALD 133
H +VK +GA + + I+ E GG + +L + P+ VC
Sbjct: 64 TCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVC------RQ 117
Query: 134 IARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGL-AREESLTEMMTAETGTYRWM 192
+ A+ LHS IIHRDLK N+L+T + I+LADFG+ A+ + + GT WM
Sbjct: 118 MLEALNFLHSKRIIHRDLKAGNVLMTLE-GDIRLADFGVSAKNLKTLQKRDSFIGTPYWM 176
Query: 193 APELYSTVTLRQ 204
APE+ T++
Sbjct: 177 APEVVMCETMKD 188
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 93/176 (52%), Gaps = 10/176 (5%)
Query: 27 FVGPRI-GEGAHAKVY--EGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQH 83
+ G R+ G+G+ +V + K Q A+K++ K + ++ K+ REV +L ++ H
Sbjct: 52 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKES--LLREVQLLKQLDH 109
Query: 84 RNLVKFIGACKEP-VMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLH 142
N++K ++ +V E+ +GG L +++ R R +V A + + +H
Sbjct: 110 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIIS-RKRFSEVDAA-RIIRQVLSGITYMH 167
Query: 143 SHGIIHRDLKPENLLLTEDLK--TIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+ I+HRDLKPENLLL K I++ DFGL+ ++ M + GT ++APE+
Sbjct: 168 KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEV 223
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 87/178 (48%), Gaps = 16/178 (8%)
Query: 32 IGEGAHAKVYEGKYKN-QTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKFI 90
+G G KVY+G+ + VA+K + + E E +F EV M+S HRNL++
Sbjct: 38 LGRGGFGKVYKGRLADGXLVAVKRLKE----ERTQGGELQFQTEVEMISMAVHRNLLRLR 93
Query: 91 GACKEPV-MVIVTELLSGGTLRKYLLNMRPRC---LDVCVAIGFALDIARAMECLHSH-- 144
G C P ++V ++ G++ L RP LD AL AR + LH H
Sbjct: 94 GFCMTPTERLLVYPYMANGSVAS-CLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCD 152
Query: 145 -GIIHRDLKPENLLLTEDLKTIKLADFGLAR--EESLTEMMTAETGTYRWMAPELYST 199
IIHRD+K N+LL E+ + + + DFGLA+ + + A G +APE ST
Sbjct: 153 PKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLST 209
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 84/174 (48%), Gaps = 11/174 (6%)
Query: 29 GPRIGEGAHAKVYEGK--YKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNL 86
G +GEG+ + V + ++ AIKI+ K +E K RE ++SR+ H
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE--NKVPYVTRERDVMSRLDHPFF 94
Query: 87 VK-FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
VK + + + G L KY+ + D + +I A+E LH G
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGKG 152
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAR---EESLTEMMTAETGTYRWMAPEL 196
IIHRDLKPEN+LL ED+ I++ DFG A+ ES GT ++++PEL
Sbjct: 153 IIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 84/174 (48%), Gaps = 11/174 (6%)
Query: 29 GPRIGEGAHAKVYEGK--YKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNL 86
G +GEG+ + V + ++ AIKI+ K +E K RE ++SR+ H
Sbjct: 34 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE--NKVPYVTRERDVMSRLDHPFF 91
Query: 87 VK-FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
VK + + + G L KY+ + D + +I A+E LH G
Sbjct: 92 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGKG 149
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAR---EESLTEMMTAETGTYRWMAPEL 196
IIHRDLKPEN+LL ED+ I++ DFG A+ ES GT ++++PEL
Sbjct: 150 IIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 202
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 84/174 (48%), Gaps = 11/174 (6%)
Query: 29 GPRIGEGAHAKVYEGK--YKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNL 86
G +GEG+ + V + ++ AIKI+ K +E K RE ++SR+ H
Sbjct: 35 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE--NKVPYVTRERDVMSRLDHPFF 92
Query: 87 VK-FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
VK + + + G L KY+ + D + +I A+E LH G
Sbjct: 93 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGKG 150
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAR---EESLTEMMTAETGTYRWMAPEL 196
IIHRDLKPEN+LL ED+ I++ DFG A+ ES GT ++++PEL
Sbjct: 151 IIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 84/174 (48%), Gaps = 11/174 (6%)
Query: 29 GPRIGEGAHAKVYEGK--YKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNL 86
G +GEG+ + V + ++ AIKI+ K +E K RE ++SR+ H
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE--NKVPYVTRERDVMSRLDHPFF 94
Query: 87 VK-FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
VK + + + G L KY+ + D + +I A+E LH G
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGKG 152
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAR---EESLTEMMTAETGTYRWMAPEL 196
IIHRDLKPEN+LL ED+ I++ DFG A+ ES GT ++++PEL
Sbjct: 153 IIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 83/170 (48%), Gaps = 10/170 (5%)
Query: 32 IGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+G+G+ +V + K + Q A+K+++K K S REV +L ++ H N++K
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKN---KDTSTILREVELLKKLDHPNIMKL 86
Query: 90 IGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
++ IV EL +GG L ++ R R A + + +H H I+H
Sbjct: 87 FEILEDSSSFYIVGELYTGGELFDEIIK-RKR-FSEHDAARIIKQVFSGITYMHKHNIVH 144
Query: 149 RDLKPENLLLTEDLK--TIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
RDLKPEN+LL K IK+ DFGL+ M GT ++APE+
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEV 194
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 84/174 (48%), Gaps = 11/174 (6%)
Query: 29 GPRIGEGAHAKVYEGK--YKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNL 86
G +GEG+ + V + ++ AIKI+ K +E K RE ++SR+ H
Sbjct: 40 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE--NKVPYVTRERDVMSRLDHPFF 97
Query: 87 VK-FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
VK + + + G L KY+ + D + +I A+E LH G
Sbjct: 98 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGKG 155
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAR---EESLTEMMTAETGTYRWMAPEL 196
IIHRDLKPEN+LL ED+ I++ DFG A+ ES GT ++++PEL
Sbjct: 156 IIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 208
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 86/177 (48%), Gaps = 8/177 (4%)
Query: 25 HLFVGPRIGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQ 82
H +G +G G KV G+++ VA+KI+++ + + RE+ L +
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRS--LDVVGKIKREIQNLKLFR 69
Query: 83 HRNLVKFIGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECL 141
H +++K P +V E +SGG L Y+ + ++ A I A++
Sbjct: 70 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYIC--KHGRVEEMEARRLFQQILSAVDYC 127
Query: 142 HSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPELYS 198
H H ++HRDLKPEN+LL + K+ADFGL+ S E + G+ + APE+ S
Sbjct: 128 HRHMVVHRDLKPENVLLDAHMNA-KIADFGLSNMMSDGEFLRTSCGSPNYAAPEVIS 183
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 87/178 (48%), Gaps = 14/178 (7%)
Query: 31 RIGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+IGEG + V++ K + ++ VA+K V + E + S RE+ +L ++H+N+V+
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVP---SSALREICLLKELKHKNIVR 65
Query: 89 FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
+ + L+KY + LD + F + + + HS ++H
Sbjct: 66 LHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGD-LDPEIVKSFLFQLLKGLGFCHSRNVLH 124
Query: 149 RDLKPENLLLTEDLKTIKLADFGLAREESL-TEMMTAETGTYRWMAPE------LYST 199
RDLKP+NLL+ + +KLA+FGLAR + +AE T + P+ LYST
Sbjct: 125 RDLKPQNLLINRN-GELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYST 181
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 84/174 (48%), Gaps = 11/174 (6%)
Query: 29 GPRIGEGAHAKVYEGK--YKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNL 86
G +GEG+ + V + ++ AIKI+ K +E K RE ++SR+ H
Sbjct: 35 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE--NKVPYVTRERDVMSRLDHPFF 92
Query: 87 VK-FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
VK + + + G L KY+ + D + +I A+E LH G
Sbjct: 93 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGKG 150
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAR---EESLTEMMTAETGTYRWMAPEL 196
IIHRDLKPEN+LL ED+ I++ DFG A+ ES GT ++++PEL
Sbjct: 151 IIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 84/174 (48%), Gaps = 11/174 (6%)
Query: 29 GPRIGEGAHAKVYEGK--YKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNL 86
G +GEG+ + V + ++ AIKI+ K +E K RE ++SR+ H
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE--NKVPYVTRERDVMSRLDHPFF 94
Query: 87 VK-FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
VK + + + G L KY+ + D + +I A+E LH G
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGKG 152
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAR---EESLTEMMTAETGTYRWMAPEL 196
IIHRDLKPEN+LL ED+ I++ DFG A+ ES GT ++++PEL
Sbjct: 153 IIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 10/170 (5%)
Query: 32 IGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+G+G+ +V + K + Q A+K+++K K S REV +L ++ H N++K
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKN---KDTSTILREVELLKKLDHPNIMKL 86
Query: 90 IGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
++ IV EL +GG L ++ R R + A + + +H H I+H
Sbjct: 87 FEILEDSSSFYIVGELYTGGELFDEIIK-RKRFSEHDAA-RIIKQVFSGITYMHKHNIVH 144
Query: 149 RDLKPENLLLTEDLK--TIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
RDLKPEN+LL K IK+ DFGL+ M GT ++APE+
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEV 194
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 84/178 (47%), Gaps = 16/178 (8%)
Query: 31 RIGEGAHAKVYEGKYKN--QTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
R+G G V +++ + VAIK + +P K R+ E+ ++ ++ H N+V
Sbjct: 22 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSP----KNRERWCLEIQIMKKLNHPNVVS 77
Query: 89 -------FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRC-LDVCVAIGFALDIARAMEC 140
+ ++ E GG LRKYL C L DI+ A+
Sbjct: 78 AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRY 137
Query: 141 LHSHGIIHRDLKPENLLLTEDLKTI--KLADFGLAREESLTEMMTAETGTYRWMAPEL 196
LH + IIHRDLKPEN++L + + K+ D G A+E E+ T GT +++APEL
Sbjct: 138 LHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPEL 195
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 103/237 (43%), Gaps = 37/237 (15%)
Query: 33 GEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKFIGA 92
G A++ K N+ VA+K + +GE +E K RE+ ++H N+V+F
Sbjct: 30 GNFGVARLMRDKQANELVAVKYIERGEKIDENVK------REIINHRSLRHPNIVRFKEV 83
Query: 93 CKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR--------AMECLHS 143
P + IV E SGG L + +C A F+ D AR + H+
Sbjct: 84 ILTPTHLAIVMEYASGGELFER----------ICNAGRFSEDEARFFFQQLISGVSYAHA 133
Query: 144 HGIIHRDLKPENLLLTED-LKTIKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTL 202
+ HRDLK EN LL +K+ADFG ++ L + GT ++APE+
Sbjct: 134 MQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLL---- 189
Query: 203 RQGEKKHYNHKNVRPSAENVPEELSIILTSCWK-EDPNARPNFTQIIQMLLNYLSAI 258
KK Y+ K + V L ++L + EDP NF + I +LN AI
Sbjct: 190 ----KKEYDGKVADVWSCGV--TLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAI 240
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 84/178 (47%), Gaps = 16/178 (8%)
Query: 31 RIGEGAHAKVYEGKYKN--QTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
R+G G V +++ + VAIK + +P K R+ E+ ++ ++ H N+V
Sbjct: 21 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSP----KNRERWCLEIQIMKKLNHPNVVS 76
Query: 89 -------FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRC-LDVCVAIGFALDIARAMEC 140
+ ++ E GG LRKYL C L DI+ A+
Sbjct: 77 AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRY 136
Query: 141 LHSHGIIHRDLKPENLLLTEDLKTI--KLADFGLAREESLTEMMTAETGTYRWMAPEL 196
LH + IIHRDLKPEN++L + + K+ D G A+E E+ T GT +++APEL
Sbjct: 137 LHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPEL 194
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 84/174 (48%), Gaps = 11/174 (6%)
Query: 29 GPRIGEGAHAKVYEGK--YKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNL 86
G +GEG+ + V + ++ AIKI+ K +E K RE ++SR+ H
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE--NKVPYVTRERDVMSRLDHPFF 94
Query: 87 VK-FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
VK + + + G L KY+ + D + +I A+E LH G
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGKG 152
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAR---EESLTEMMTAETGTYRWMAPEL 196
IIHRDLKPEN+LL ED+ I++ DFG A+ ES GT ++++PEL
Sbjct: 153 IIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 18/192 (9%)
Query: 21 IDPKHLF-VGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLS 79
+DP ++ + +G+GA KVY+ K K +T A+ ET E ++ + E+ +L+
Sbjct: 15 LDPNEVWEIVGELGDGAFGKVYKAKNK-ETGALAAAKVIETKSE--EELEDYIVEIEILA 71
Query: 80 RVQHRNLVKFIGAC-KEPVMVIVTELLSGGTLRKYLLNM-----RPRCLDVCVAIGFALD 133
H +VK +GA + + I+ E GG + +L + P+ VC + AL+
Sbjct: 72 TCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALN 131
Query: 134 IARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGL-AREESLTEMMTAETGTYRWM 192
LHS IIHRDLK N+L+T + I+LADFG+ A+ + + GT WM
Sbjct: 132 F------LHSKRIIHRDLKAGNVLMTLE-GDIRLADFGVSAKNLKTLQKRDSFIGTPYWM 184
Query: 193 APELYSTVTLRQ 204
APE+ T++
Sbjct: 185 APEVVMCETMKD 196
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 92/184 (50%), Gaps = 17/184 (9%)
Query: 22 DPKHLFVGPRIGEGAHAKVY-----EGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVA 76
DP + +G+G+ KV+ G Q A+K++ K + R E
Sbjct: 22 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLK---VRDRVRTKMERD 78
Query: 77 MLSRVQHRNLVKFIGACK-EPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFAL-DI 134
+L V H +VK A + E + ++ + L GG L + + + F L ++
Sbjct: 79 ILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL---FTRLSKEVMFTEEDVKFYLAEL 135
Query: 135 ARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAET--GTYRWM 192
A A++ LHS GII+RDLKPEN+LL E+ IKL DFGL++ ES+ A + GT +M
Sbjct: 136 ALALDHLHSLGIIYRDLKPENILLDEE-GHIKLTDFGLSK-ESIDHEKKAYSFCGTVEYM 193
Query: 193 APEL 196
APE+
Sbjct: 194 APEV 197
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 84/174 (48%), Gaps = 11/174 (6%)
Query: 29 GPRIGEGAHAKVYEGK--YKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNL 86
G +GEG+ + V + ++ AIKI+ K +E K RE ++SR+ H
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE--NKVPYVTRERDVMSRLDHPFF 94
Query: 87 VK-FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
VK + + + G L KY+ + D + +I A+E LH G
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGKG 152
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAR---EESLTEMMTAETGTYRWMAPEL 196
IIHRDLKPEN+LL ED+ I++ DFG A+ ES GT ++++PEL
Sbjct: 153 IIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 83/184 (45%), Gaps = 21/184 (11%)
Query: 28 VGPR------IGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRV 81
VGPR IGEGA+ V Y N +++ K +P E R RE+ +L R
Sbjct: 25 VGPRYTNLSYIGEGAYGMVCSA-YDNLN-KVRVAIKKISPFEHQTYCQRTLREIKILLRF 82
Query: 82 QHRNLVKFIGACKEPVM-----VIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+H N++ + P + V + + L L K L +C F I R
Sbjct: 83 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICY---FLYQILR 139
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR----EESLTEMMTAETGTYRWM 192
++ +HS ++HRDLKP NLLL +K+ DFGLAR + T +T T +
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVATRWYR 198
Query: 193 APEL 196
APE+
Sbjct: 199 APEI 202
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 112/273 (41%), Gaps = 43/273 (15%)
Query: 16 DAKWLIDPKHLFVGP-RIGEGAHAKVYEGKY----KNQTVAIKIVHKGETPEEIAKKESR 70
D K + +L + +G G V +G Y K VAIK++ +G E A E
Sbjct: 1 DKKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT---EKADTEE- 56
Query: 71 FAREVAMLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGF 130
RE ++ ++ + +V+ IG C+ +++V E+ GG L K+L+ R + V
Sbjct: 57 MMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREE-IPVSNVAEL 115
Query: 131 ALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR----EESLTEMMTAET 186
++ M+ L +HRDL N+LL + K++DFGL++ ++S +A
Sbjct: 116 LHQVSMGMKYLEEKNFVHRDLAARNVLLV-NRHYAKISDFGLSKALGADDSYYTARSAGK 174
Query: 187 GTYRWMAPE-------------------LYSTVTLRQGEKKHYNHKNVRPSAEN------ 221
+W APE ++ ++ Q K V E
Sbjct: 175 WPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMEC 234
Query: 222 ---VPEELSIILTSCWKEDPNARPNFTQIIQML 251
P EL +++ CW RP+F + Q +
Sbjct: 235 PPECPPELYALMSDCWIYKWEDRPDFLTVEQRM 267
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 94/185 (50%), Gaps = 23/185 (12%)
Query: 32 IGEGAHAKVYEGKYKNQT---VAIKIVHKGETPEEIAKKESRFAREVAMLSRVQ-HRNLV 87
+GEGA+AKV +G Q A+KI+ K + SR REV L + Q ++N++
Sbjct: 21 LGEGAYAKV-QGAVSLQNGKEYAVKIIEK-----QAGHSRSRVFREVETLYQCQGNKNIL 74
Query: 88 KFIGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGI 146
+ I ++ +V E L GG++ ++ + + + A D+A A++ LH+ GI
Sbjct: 75 ELIEFFEDDTRFYLVFEKLQGGSILAHI--QKQKHFNEREASRVVRDVAAALDFLHTKGI 132
Query: 147 IHRDLKPENLLLT--EDLKTIKLADF----GLAREESLTEMMTAE----TGTYRWMAPEL 196
HRDLKPEN+L E + +K+ DF G+ S T + T E G+ +MAPE+
Sbjct: 133 AHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEV 192
Query: 197 YSTVT 201
T
Sbjct: 193 VEVFT 197
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 83/184 (45%), Gaps = 21/184 (11%)
Query: 28 VGPR------IGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRV 81
VGPR IGEGA+ V Y N +++ + +P E R RE+ +L R
Sbjct: 25 VGPRYTNLSYIGEGAYGMVCSA-YDNLN-KVRVAIRKISPFEHQTYCQRTLREIKILLRF 82
Query: 82 QHRNLVKFIGACKEPVM-----VIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+H N++ + P + V + + L L K L +C F I R
Sbjct: 83 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY---FLYQILR 139
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR----EESLTEMMTAETGTYRWM 192
++ +HS ++HRDLKP NLLL +K+ DFGLAR + T +T T +
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVATRWYR 198
Query: 193 APEL 196
APE+
Sbjct: 199 APEI 202
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 86/171 (50%), Gaps = 8/171 (4%)
Query: 32 IGEGAHAKVYEG--KYKNQTVAIKIVHKGETPEEIAKKESRFAR---EVAMLSRVQHRNL 86
+G GA V+ K KN+ V +K + K + E+ ++ + + E+A+LSRV+H N+
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
Query: 87 VKFIGACK-EPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
+K + + + +V E G ++ PR LD +A + A+ L
Sbjct: 92 IKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPR-LDEPLASYIFRQLVSAVGYLRLKD 150
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
IIHRD+K EN+++ ED TIKL DFG A ++ GT + APE+
Sbjct: 151 IIHRDIKDENIVIAEDF-TIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEV 200
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 92/184 (50%), Gaps = 17/184 (9%)
Query: 22 DPKHLFVGPRIGEGAHAKVY-----EGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVA 76
DP + +G+G+ KV+ G Q A+K++ K + R E
Sbjct: 23 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLK---VRDRVRTKMERD 79
Query: 77 MLSRVQHRNLVKFIGACK-EPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFAL-DI 134
+L V H +VK A + E + ++ + L GG L + + + F L ++
Sbjct: 80 ILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL---FTRLSKEVMFTEEDVKFYLAEL 136
Query: 135 ARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAET--GTYRWM 192
A A++ LHS GII+RDLKPEN+LL E+ IKL DFGL++ ES+ A + GT +M
Sbjct: 137 ALALDHLHSLGIIYRDLKPENILLDEE-GHIKLTDFGLSK-ESIDHEKKAYSFCGTVEYM 194
Query: 193 APEL 196
APE+
Sbjct: 195 APEV 198
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 85/170 (50%), Gaps = 9/170 (5%)
Query: 31 RIGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+IGEG + VY+ + K + VA+K + E + S RE+++L + H N+VK
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHPNIVK 69
Query: 89 FIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGII 147
+ E + +V E L L+ ++ + + + + + + + HSH ++
Sbjct: 70 LLDVIHTENKLYLVFEFLHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 128
Query: 148 HRDLKPENLLLTEDLKTIKLADFGLAREESL-TEMMTAETGTYRWMAPEL 196
HRDLKP+NLL+ + IKLADFGLAR + E T + APE+
Sbjct: 129 HRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 177
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 84/174 (48%), Gaps = 11/174 (6%)
Query: 29 GPRIGEGAHAKVYEGK--YKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNL 86
G +GEG+ + V + ++ AIKI+ K +E K RE ++SR+ H
Sbjct: 42 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE--NKVPYVTRERDVMSRLDHPFF 99
Query: 87 VK-FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
VK + + + G L KY+ + D + +I A+E LH G
Sbjct: 100 VKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGKG 157
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAR---EESLTEMMTAETGTYRWMAPEL 196
IIHRDLKPEN+LL ED+ I++ DFG A+ ES GT ++++PEL
Sbjct: 158 IIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 210
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 90/169 (53%), Gaps = 8/169 (4%)
Query: 32 IGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK- 88
+G+G+ KV+ ++K NQ AIK + K + + + + V L+ +H L
Sbjct: 26 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA-WEHPFLTHM 84
Query: 89 FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
F + + V E L+GG L ++ + D+ A +A +I ++ LHS GI++
Sbjct: 85 FCTFQTKENLFFVMEYLNGGDLMYHIQSCHK--FDLSRATFYAAEIILGLQFLHSKGIVY 142
Query: 149 RDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAE-TGTYRWMAPEL 196
RDLK +N+LL +D IK+ADFG+ +E L + T E GT ++APE+
Sbjct: 143 RDLKLDNILLDKD-GHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEI 190
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 86/177 (48%), Gaps = 8/177 (4%)
Query: 25 HLFVGPRIGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQ 82
H +G +G G KV G+++ VA+KI+++ + + RE+ L +
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRS--LDVVGKIKREIQNLKLFR 69
Query: 83 HRNLVKFIGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECL 141
H +++K P +V E +SGG L Y+ + ++ A I A++
Sbjct: 70 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYIC--KHGRVEEMEARRLFQQILSAVDYC 127
Query: 142 HSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPELYS 198
H H ++HRDLKPEN+LL + K+ADFGL+ S E + G+ + APE+ S
Sbjct: 128 HRHMVVHRDLKPENVLLDAHMNA-KIADFGLSNMMSDGEFLRDSCGSPNYAAPEVIS 183
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 86/170 (50%), Gaps = 9/170 (5%)
Query: 31 RIGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+IGEG + VY+ + K + VA+K + E + S RE+++L + H N+VK
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHPNIVK 69
Query: 89 FIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGII 147
+ E + +V E + L+K++ + + + + + + + HSH ++
Sbjct: 70 LLDVIHTENKLYLVFEHVDQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 128
Query: 148 HRDLKPENLLLTEDLKTIKLADFGLAREESL-TEMMTAETGTYRWMAPEL 196
HRDLKP+NLL+ + IKLADFGLAR + E T + APE+
Sbjct: 129 HRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 177
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 90/178 (50%), Gaps = 23/178 (12%)
Query: 32 IGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKFIG 91
IG G KVY+G ++ K+ K TPE ++ F E+ LS +H +LV IG
Sbjct: 47 IGHGVFGKVYKGVLRD---GAKVALKRRTPES-SQGIEEFETEIETLSFCRHPHLVSLIG 102
Query: 92 ACKE-PVMVIVTELLSGGTLRKYL-------LNMR-PRCLDVCVAIGFALDIARAMECLH 142
C E M+++ + + G L+++L ++M + L++C+ AR + LH
Sbjct: 103 FCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGA------ARGLHYLH 156
Query: 143 SHGIIHRDLKPENLLLTEDLKTIKLADFGLAR---EESLTEMMTAETGTYRWMAPELY 197
+ IIHRD+K N+LL E+ K+ DFG+++ E T + GT ++ PE +
Sbjct: 157 TRAIIHRDVKSINILLDENF-VPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYF 213
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 84/172 (48%), Gaps = 12/172 (6%)
Query: 31 RIGEGAHAKVYEGKYKNQTV--AIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
++G GA+ +V + K V AIKI+ K S+ EVA+L + H N++K
Sbjct: 44 KLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVS---TSSNSKLLEEVAVLKLLDHPNIMK 100
Query: 89 FIGACKEPV-MVIVTELLSGGTLRKYLLN-MRPRCLDVCVAIGFALDIARAMECLHSHGI 146
++ +V E GG L +++ M+ +D V I L + LH H I
Sbjct: 101 LYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVL---SGVTYLHKHNI 157
Query: 147 IHRDLKPENLLLTEDLKT--IKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+HRDLKPENLLL K IK+ DFGL+ + M GT ++APE+
Sbjct: 158 VHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEV 209
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 90/178 (50%), Gaps = 23/178 (12%)
Query: 32 IGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKFIG 91
IG G KVY+G ++ K+ K TPE ++ F E+ LS +H +LV IG
Sbjct: 47 IGHGVFGKVYKGVLRD---GAKVALKRRTPES-SQGIEEFETEIETLSFCRHPHLVSLIG 102
Query: 92 ACKE-PVMVIVTELLSGGTLRKYL-------LNMR-PRCLDVCVAIGFALDIARAMECLH 142
C E M+++ + + G L+++L ++M + L++C+ AR + LH
Sbjct: 103 FCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGA------ARGLHYLH 156
Query: 143 SHGIIHRDLKPENLLLTEDLKTIKLADFGLAR---EESLTEMMTAETGTYRWMAPELY 197
+ IIHRD+K N+LL E+ K+ DFG+++ E T + GT ++ PE +
Sbjct: 157 TRAIIHRDVKSINILLDENF-VPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYF 213
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 93/180 (51%), Gaps = 23/180 (12%)
Query: 32 IGEGAHAKVYE--GKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQ-HRNLVK 88
+GEGAHA+V +Q A+KI+ K P I SR REV ML + Q HRN+++
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEK--QPGHI---RSRVFREVEMLYQCQGHRNVLE 75
Query: 89 FIGACKE-PVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGII 147
I +E +V E + GG++ ++ + R + A D+A A++ LH+ GI
Sbjct: 76 LIEFFEEEDRFYLVFEKMRGGSILSHI--HKRRHFNELEASVVVQDVASALDFLHNKGIA 133
Query: 148 HRDLKPENLLLTE--DLKTIKLADFGLAREESLT---------EMMTAETGTYRWMAPEL 196
HRDLKPEN+L + +K+ DFGL L E++T G+ +MAPE+
Sbjct: 134 HRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTP-CGSAEYMAPEV 192
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 113/284 (39%), Gaps = 64/284 (22%)
Query: 20 LIDPKHLFVGPRIGEGAHAKVYEGKYK------NQTVAIK-IVHKGETPEEIAKKESRFA 72
+ + +HL ++G+G V +Y VA+K + H G ++ F
Sbjct: 3 IFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG------PDQQRDFQ 56
Query: 73 REVAMLSRVQHRNLVKFIGAC---KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIG 129
RE+ +L + +VK+ G P + +V E L G LR +L R R LD +
Sbjct: 57 REIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRAR-LDASRLLL 115
Query: 130 FALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTE--MMTAETG 187
++ I + ME L S +HRDL N+L+ E +K+ADFGLA+ L + + E G
Sbjct: 116 YSSQICKGMEYLGSRRCVHRDLAARNILV-ESEAHVKIADFGLAKLLPLDKDXXVVREPG 174
Query: 188 T--YRWMAPE-LYSTVTLRQG----------EKKHYNHKNVRPSAE-------------- 220
W APE L + RQ E Y K+ PSAE
Sbjct: 175 QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPAL 234
Query: 221 -----------------NVPEELSIILTSCWKEDPNARPNFTQI 247
P E+ ++ CW P RP+F+ +
Sbjct: 235 CRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSAL 278
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 82/184 (44%), Gaps = 21/184 (11%)
Query: 28 VGPR------IGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRV 81
VGPR IGEGA+ V Y N +++ K +P E R RE+ +L R
Sbjct: 25 VGPRYTNLSYIGEGAYGMVCSA-YDNLN-KVRVAIKKISPFEHQTYCQRTLREIKILLRF 82
Query: 82 QHRNLVKFIGACKEPVM-----VIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+H N++ + P + V + + L L K L +C F I R
Sbjct: 83 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY---FLYQILR 139
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR----EESLTEMMTAETGTYRWM 192
++ +HS ++HRDLKP NLLL +K+ DFGLAR + T + T +
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTCD-LKICDFGLARVADPDHDHTGFLXEXVATRWYR 198
Query: 193 APEL 196
APE+
Sbjct: 199 APEI 202
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 91/171 (53%), Gaps = 15/171 (8%)
Query: 32 IGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+G GA ++V+ K + + A+K + K +P A ++S E+A+L +++H N+V
Sbjct: 17 LGSGAFSEVFLVKQRLTGKLFALKCIKK--SP---AFRDSSLENEIAVLKKIKHENIVTL 71
Query: 90 IGACKEPV-MVIVTELLSGGTLRKYLLNMRPRC-LDVCVAIGFALDIARAMECLHSHGII 147
+ +V +L+SGG L +L D + I + A++ LH +GI+
Sbjct: 72 EDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQ---QVLSAVKYLHENGIV 128
Query: 148 HRDLKPENLLLT--EDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
HRDLKPENLL E+ I + DFGL++ E +M+ GT ++APE+
Sbjct: 129 HRDLKPENLLYLTPEENSKIMITDFGLSKMEQ-NGIMSTACGTPGYVAPEV 178
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 82/184 (44%), Gaps = 21/184 (11%)
Query: 28 VGPR------IGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRV 81
VGPR IGEGA+ V Y N +++ K +P E R RE+ +L R
Sbjct: 26 VGPRYTNLSYIGEGAYGMVCSA-YDNLN-KVRVAIKKISPFEHQTYCQRTLREIKILLRF 83
Query: 82 QHRNLVKFIGACKEPVM-----VIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+H N++ + P + V + + L L K L +C F I R
Sbjct: 84 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY---FLYQILR 140
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR----EESLTEMMTAETGTYRWM 192
++ +HS ++HRDLKP NLLL +K+ DFGLAR + T + T +
Sbjct: 141 GLKYIHSANVLHRDLKPSNLLLNTTCD-LKICDFGLARVADPDHDHTGFLXEXVATRWYR 199
Query: 193 APEL 196
APE+
Sbjct: 200 APEI 203
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 119/274 (43%), Gaps = 54/274 (19%)
Query: 31 RIGEGAHAKVYEGKYKN--QTVAIKIVHKGETPEEIAKKESR--FAREVAMLSRVQHRNL 86
+IGEG+ V ++ + VA+K + ++ K++ R EV ++ QH N+
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKM-------DLRKQQRRELLFNEVVIMRDYQHENV 79
Query: 87 VKFIGA-CKEPVMVIVTELLSGGTLRKYLLNMR---PRCLDVCVAIGFALDIARAMECLH 142
V+ + + +V E L GG L + + R + VC+A+ +A+ LH
Sbjct: 80 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAV------LQALSVLH 133
Query: 143 SHGIIHRDLKPENLLLTEDLKTIKLADFGL-AREESLTEMMTAETGTYRWMAPELYS--- 198
+ G+IHRD+K +++LLT D + +KL+DFG A+ GT WMAPEL S
Sbjct: 134 AQGVIHRDIKSDSILLTHDGR-VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP 192
Query: 199 -------------TVTLRQGEKKHYN----------HKNVRPSAEN---VPEELSIILTS 232
+ + GE ++N N+ P +N V L L
Sbjct: 193 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDR 252
Query: 233 CWKEDPNARPNFTQIIQMLLNYLSAIAPPEPMIP 266
DP R ++++ +L+ PP ++P
Sbjct: 253 LLVRDPAQRATAAELLKH--PFLAKAGPPASIVP 284
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 86/170 (50%), Gaps = 9/170 (5%)
Query: 31 RIGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+IGEG + VY+ + K + VA+K + E + S RE+++L + H N+VK
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHPNIVK 65
Query: 89 FIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGII 147
+ E + +V E + L+ ++ + + + + + + + HSH ++
Sbjct: 66 LLDVIHTENKLYLVFEHVHQD-LKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 124
Query: 148 HRDLKPENLLLTEDLKTIKLADFGLAREESL-TEMMTAETGTYRWMAPEL 196
HRDLKP+NLL+ + IKLADFGLAR + T E T + APE+
Sbjct: 125 HRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 173
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 86/169 (50%), Gaps = 9/169 (5%)
Query: 31 RIGEGAHAKVYEGKYK-NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+IGEG + VY+ + +T A+K + + E I S RE+++L ++H N+VK
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIP---STTIREISILKELKHSNIVKL 65
Query: 90 IGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
+ +V+V E L K LL++ L+ A F L + + H ++H
Sbjct: 66 YDVIHTKKRLVLVFEHLDQDL--KKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLH 123
Query: 149 RDLKPENLLLTEDLKTIKLADFGLAREESL-TEMMTAETGTYRWMAPEL 196
RDLKP+NLL+ + +K+ADFGLAR + T E T + AP++
Sbjct: 124 RDLKPQNLLINRE-GELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDV 171
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 84/186 (45%), Gaps = 25/186 (13%)
Query: 28 VGPR------IGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRV 81
VGPR IGEGA+ V Y N +++ K +P E R RE+ +L
Sbjct: 23 VGPRYTNLSYIGEGAYGMVCSA-YDNVN-KVRVAIKKISPFEHQTYCQRTLREIKILLAF 80
Query: 82 QHRNLVKFIGACKEPVM-----VIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+H N++ + P + V + + L L K L +C F I R
Sbjct: 81 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY---FLYQILR 137
Query: 137 AMECLHSHGIIHRDLKPENLLL--TEDLKTIKLADFGLAR----EESLTEMMTAETGTYR 190
++ +HS ++HRDLKP NLLL T DL K+ DFGLAR + T +T T
Sbjct: 138 GLKYIHSANVLHRDLKPSNLLLNTTSDL---KICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 191 WMAPEL 196
+ APE+
Sbjct: 195 YRAPEI 200
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 119/274 (43%), Gaps = 54/274 (19%)
Query: 31 RIGEGAHAKVYEGKYKN--QTVAIKIVHKGETPEEIAKKESR--FAREVAMLSRVQHRNL 86
+IGEG+ V ++ + VA+K + ++ K++ R EV ++ QH N+
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKM-------DLRKQQRRELLFNEVVIMRDYQHENV 83
Query: 87 VKFIGA-CKEPVMVIVTELLSGGTLRKYLLNMR---PRCLDVCVAIGFALDIARAMECLH 142
V+ + + +V E L GG L + + R + VC+A+ +A+ LH
Sbjct: 84 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAV------LQALSVLH 137
Query: 143 SHGIIHRDLKPENLLLTEDLKTIKLADFGL-AREESLTEMMTAETGTYRWMAPELYS--- 198
+ G+IHRD+K +++LLT D + +KL+DFG A+ GT WMAPEL S
Sbjct: 138 AQGVIHRDIKSDSILLTHDGR-VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP 196
Query: 199 -------------TVTLRQGEKKHYN----------HKNVRPSAEN---VPEELSIILTS 232
+ + GE ++N N+ P +N V L L
Sbjct: 197 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDR 256
Query: 233 CWKEDPNARPNFTQIIQMLLNYLSAIAPPEPMIP 266
DP R ++++ +L+ PP ++P
Sbjct: 257 LLVRDPAQRATAAELLKH--PFLAKAGPPASIVP 288
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 86/169 (50%), Gaps = 9/169 (5%)
Query: 31 RIGEGAHAKVYEGKYK-NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+IGEG + VY+ + +T A+K + + E I S RE+++L ++H N+VK
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIP---STTIREISILKELKHSNIVKL 65
Query: 90 IGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
+ +V+V E L K LL++ L+ A F L + + H ++H
Sbjct: 66 YDVIHTKKRLVLVFEHLDQDL--KKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLH 123
Query: 149 RDLKPENLLLTEDLKTIKLADFGLAREESL-TEMMTAETGTYRWMAPEL 196
RDLKP+NLL+ + +K+ADFGLAR + T E T + AP++
Sbjct: 124 RDLKPQNLLINRE-GELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDV 171
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 119/274 (43%), Gaps = 54/274 (19%)
Query: 31 RIGEGAHAKVYEGKYKN--QTVAIKIVHKGETPEEIAKKESR--FAREVAMLSRVQHRNL 86
+IGEG+ V ++ + VA+K + ++ K++ R EV ++ QH N+
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKM-------DLRKQQRRELLFNEVVIMRDYQHENV 90
Query: 87 VKFIGA-CKEPVMVIVTELLSGGTLRKYLLNMR---PRCLDVCVAIGFALDIARAMECLH 142
V+ + + +V E L GG L + + R + VC+A+ +A+ LH
Sbjct: 91 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAV------LQALSVLH 144
Query: 143 SHGIIHRDLKPENLLLTEDLKTIKLADFGL-AREESLTEMMTAETGTYRWMAPELYS--- 198
+ G+IHRD+K +++LLT D + +KL+DFG A+ GT WMAPEL S
Sbjct: 145 AQGVIHRDIKSDSILLTHDGR-VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP 203
Query: 199 -------------TVTLRQGEKKHYN----------HKNVRPSAEN---VPEELSIILTS 232
+ + GE ++N N+ P +N V L L
Sbjct: 204 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDR 263
Query: 233 CWKEDPNARPNFTQIIQMLLNYLSAIAPPEPMIP 266
DP R ++++ +L+ PP ++P
Sbjct: 264 LLVRDPAQRATAAELLKH--PFLAKAGPPASIVP 295
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 119/274 (43%), Gaps = 54/274 (19%)
Query: 31 RIGEGAHAKVYEGKYKN--QTVAIKIVHKGETPEEIAKKESR--FAREVAMLSRVQHRNL 86
+IGEG+ V ++ + VA+K + ++ K++ R EV ++ QH N+
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKM-------DLRKQQRRELLFNEVVIMRDYQHENV 88
Query: 87 VKFIGA-CKEPVMVIVTELLSGGTLRKYLLNMR---PRCLDVCVAIGFALDIARAMECLH 142
V+ + + +V E L GG L + + R + VC+A+ +A+ LH
Sbjct: 89 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAV------LQALSVLH 142
Query: 143 SHGIIHRDLKPENLLLTEDLKTIKLADFGL-AREESLTEMMTAETGTYRWMAPELYS--- 198
+ G+IHRD+K +++LLT D + +KL+DFG A+ GT WMAPEL S
Sbjct: 143 AQGVIHRDIKSDSILLTHDGR-VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP 201
Query: 199 -------------TVTLRQGEKKHYN----------HKNVRPSAEN---VPEELSIILTS 232
+ + GE ++N N+ P +N V L L
Sbjct: 202 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDR 261
Query: 233 CWKEDPNARPNFTQIIQMLLNYLSAIAPPEPMIP 266
DP R ++++ +L+ PP ++P
Sbjct: 262 LLVRDPAQRATAAELLKH--PFLAKAGPPASIVP 293
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 112/276 (40%), Gaps = 65/276 (23%)
Query: 32 IGEGAHAKVYEGKYK------NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+GEG KV Y + VA+K + P+ S + +E+ +L + H +
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQH----RSGWKQEIDILRTLYHEH 94
Query: 86 LVKFIGACKEP---VMVIVTELLSGGTLRKYLLNMRPR-CLDVCVAIGFALDIARAMECL 141
++K+ G C++ + +V E + G+LR YL PR + + + FA I M L
Sbjct: 95 IIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL----PRHSIGLAQLLLFAQQICEGMAYL 150
Query: 142 HSHGIIHRDLKPENLLLTEDLKTIKLADFGLARE--ESLTEMMTAETGT--YRWMAPE-- 195
H+ IHRDL N+LL D + +K+ DFGLA+ E E G W APE
Sbjct: 151 HAQHYIHRDLAARNVLLDND-RLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECL 209
Query: 196 -----------------LYSTVT-----------------LRQGE------KKHYNHKNV 215
LY +T + QG+ +
Sbjct: 210 KEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGER 269
Query: 216 RPSAENVPEELSIILTSCWKEDPNARPNFTQIIQML 251
P + P E+ ++ +CW+ + + RP F +I +L
Sbjct: 270 LPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPIL 305
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 102/232 (43%), Gaps = 23/232 (9%)
Query: 32 IGEGAH--AKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
IG G A++ K N+ VA+K + +GE +E K RE+ ++H N+V+F
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVK------REIINHRSLRHPNIVRF 79
Query: 90 IGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
P + IV E SGG L + + N D A F + + H+ + H
Sbjct: 80 KEVILTPTHLAIVMEYASGGELFERICNAGRFSED--EARFFFQQLISGVSYCHAMQVCH 137
Query: 149 RDLKPENLLLTED-LKTIKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRQGEK 207
RDLK EN LL +K+ DFG ++ L + GT ++APE+ K
Sbjct: 138 RDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLL--------K 189
Query: 208 KHYNHKNVRPSAENVPEELSIILTSCWK-EDPNARPNFTQIIQMLLNYLSAI 258
K Y+ K + V L ++L + EDP NF + I +LN AI
Sbjct: 190 KEYDGKVADVWSCGV--TLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAI 239
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 86/169 (50%), Gaps = 9/169 (5%)
Query: 31 RIGEGAHAKVYEGKYK-NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+IGEG + VY+ + +T A+K + + E I S RE+++L ++H N+VK
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIP---STTIREISILKELKHSNIVKL 65
Query: 90 IGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
+ +V+V E L K LL++ L+ A F L + + H ++H
Sbjct: 66 YDVIHTKKRLVLVFEHLDQDL--KKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLH 123
Query: 149 RDLKPENLLLTEDLKTIKLADFGLAREESL-TEMMTAETGTYRWMAPEL 196
RDLKP+NLL+ + +K+ADFGLAR + T E T + AP++
Sbjct: 124 RDLKPQNLLINRE-GELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDV 171
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 119/274 (43%), Gaps = 54/274 (19%)
Query: 31 RIGEGAHAKVYEGKYKN--QTVAIKIVHKGETPEEIAKKESR--FAREVAMLSRVQHRNL 86
+IGEG+ V ++ + VA+K + ++ K++ R EV ++ QH N+
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKM-------DLRKQQRRELLFNEVVIMRDYQHENV 133
Query: 87 VKFIGA-CKEPVMVIVTELLSGGTLRKYLLNMR---PRCLDVCVAIGFALDIARAMECLH 142
V+ + + +V E L GG L + + R + VC+A+ +A+ LH
Sbjct: 134 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAV------LQALSVLH 187
Query: 143 SHGIIHRDLKPENLLLTEDLKTIKLADFGL-AREESLTEMMTAETGTYRWMAPELYS--- 198
+ G+IHRD+K +++LLT D + +KL+DFG A+ GT WMAPEL S
Sbjct: 188 AQGVIHRDIKSDSILLTHDGR-VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP 246
Query: 199 -------------TVTLRQGEKKHYN----------HKNVRPSAEN---VPEELSIILTS 232
+ + GE ++N N+ P +N V L L
Sbjct: 247 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDR 306
Query: 233 CWKEDPNARPNFTQIIQMLLNYLSAIAPPEPMIP 266
DP R ++++ +L+ PP ++P
Sbjct: 307 LLVRDPAQRATAAELLKH--PFLAKAGPPASIVP 338
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 83/174 (47%), Gaps = 11/174 (6%)
Query: 29 GPRIGEGAHAKVYEGK--YKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNL 86
G +GEG+ + + ++ AIKI+ K +E K RE ++SR+ H
Sbjct: 35 GKILGEGSFSTTVLARELATSREYAIKILEKRHIIKE--NKVPYVTRERDVMSRLDHPFF 92
Query: 87 VK-FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
VK + + + G L KY+ + D + +I A+E LH G
Sbjct: 93 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGKG 150
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAR---EESLTEMMTAETGTYRWMAPEL 196
IIHRDLKPEN+LL ED+ I++ DFG A+ ES GT ++++PEL
Sbjct: 151 IIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 113/273 (41%), Gaps = 61/273 (22%)
Query: 32 IGEGAHAKVY------EGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+GEG KV EG + VA+K + PE + +E+ +L + H N
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSL----KPESGGNHIADLKKEIEILRNLYHEN 84
Query: 86 LVKFIGACKEP---VMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLH 142
+VK+ G C E + ++ E L G+L++YL + + +++ + +A+ I + M+ L
Sbjct: 85 IVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK-INLKQQLKYAVQICKGMDYLG 143
Query: 143 SHGIIHRDLKPENLLLTEDLKTIKLADFGLARE-ESLTEMMTAETGTYR---WMAPE--- 195
S +HRDL N+L+ E +K+ DFGL + E+ E T + W APE
Sbjct: 144 SRQYVHRDLAARNVLV-ESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 202
Query: 196 ----------------LYSTVT------------LRQGEKKHYNHKNVR----------- 216
L+ +T L+ H R
Sbjct: 203 QSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRL 262
Query: 217 PSAENVPEELSIILTSCWKEDPNARPNFTQIIQ 249
P N P+E+ ++ CW+ P+ R +F +I+
Sbjct: 263 PCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE 295
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 113/284 (39%), Gaps = 64/284 (22%)
Query: 20 LIDPKHLFVGPRIGEGAHAKVYEGKYK------NQTVAIK-IVHKGETPEEIAKKESRFA 72
+ + +HL ++G+G V +Y VA+K + H G ++ F
Sbjct: 7 IFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG------PDQQRDFQ 60
Query: 73 REVAMLSRVQHRNLVKFIGACKEP---VMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIG 129
RE+ +L + +VK+ G P + +V E L G LR +L R R LD +
Sbjct: 61 REIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR-LDASRLLL 119
Query: 130 FALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTE--MMTAETG 187
++ I + ME L S +HRDL N+L+ E +K+ADFGLA+ L + + E G
Sbjct: 120 YSSQICKGMEYLGSRRCVHRDLAARNILV-ESEAHVKIADFGLAKLLPLDKDYYVVREPG 178
Query: 188 T--YRWMAPE-LYSTVTLRQG----------EKKHYNHKNVRPSAE-------------- 220
W APE L + RQ E Y K+ PSAE
Sbjct: 179 QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPAL 238
Query: 221 -----------------NVPEELSIILTSCWKEDPNARPNFTQI 247
P E+ ++ CW P RP+F+ +
Sbjct: 239 CRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSAL 282
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 113/284 (39%), Gaps = 64/284 (22%)
Query: 20 LIDPKHLFVGPRIGEGAHAKVYEGKYK------NQTVAIK-IVHKGETPEEIAKKESRFA 72
+ + +HL ++G+G V +Y VA+K + H G ++ F
Sbjct: 6 IFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG------PDQQRDFQ 59
Query: 73 REVAMLSRVQHRNLVKFIGACKEP---VMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIG 129
RE+ +L + +VK+ G P + +V E L G LR +L R R LD +
Sbjct: 60 REIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR-LDASRLLL 118
Query: 130 FALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTE--MMTAETG 187
++ I + ME L S +HRDL N+L+ E +K+ADFGLA+ L + + E G
Sbjct: 119 YSSQICKGMEYLGSRRCVHRDLAARNILV-ESEAHVKIADFGLAKLLPLDKDYYVVREPG 177
Query: 188 T--YRWMAPE-LYSTVTLRQG----------EKKHYNHKNVRPSAE-------------- 220
W APE L + RQ E Y K+ PSAE
Sbjct: 178 QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGSERDVPAL 237
Query: 221 -----------------NVPEELSIILTSCWKEDPNARPNFTQI 247
P E+ ++ CW P RP+F+ +
Sbjct: 238 SRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSAL 281
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 113/284 (39%), Gaps = 64/284 (22%)
Query: 20 LIDPKHLFVGPRIGEGAHAKVYEGKYK------NQTVAIK-IVHKGETPEEIAKKESRFA 72
+ + +HL ++G+G V +Y VA+K + H G ++ F
Sbjct: 19 IFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG------PDQQRDFQ 72
Query: 73 REVAMLSRVQHRNLVKFIGACKEP---VMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIG 129
RE+ +L + +VK+ G P + +V E L G LR +L R R LD +
Sbjct: 73 REIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR-LDASRLLL 131
Query: 130 FALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTE--MMTAETG 187
++ I + ME L S +HRDL N+L+ E +K+ADFGLA+ L + + E G
Sbjct: 132 YSSQICKGMEYLGSRRCVHRDLAARNILV-ESEAHVKIADFGLAKLLPLDKDYYVVREPG 190
Query: 188 T--YRWMAPE-LYSTVTLRQG----------EKKHYNHKNVRPSAE-------------- 220
W APE L + RQ E Y K+ PSAE
Sbjct: 191 QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPAL 250
Query: 221 -----------------NVPEELSIILTSCWKEDPNARPNFTQI 247
P E+ ++ CW P RP+F+ +
Sbjct: 251 SRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSAL 294
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 87/172 (50%), Gaps = 9/172 (5%)
Query: 28 VGPRIGEGAHAKVYEGKYKNQ--TVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G +G+G VY + KN +A+K++ K + E A E + REV + S ++H N
Sbjct: 12 IGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 69
Query: 86 LVKFIGACKEPVMV-IVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
+++ G + V ++ E GT+ + L + D + ++A A+ HS
Sbjct: 70 ILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCHSK 127
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+IHRD+KPENLLL +K+ADFG + + + A GT ++ PE+
Sbjct: 128 KVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRAALCGTLDYLPPEM 177
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 82/178 (46%), Gaps = 26/178 (14%)
Query: 32 IGEGAHAKV---YEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
IG GA V Y+ + + VAIK K P + R RE+ ++ V H+N++
Sbjct: 32 IGSGAQGIVCAAYDAILE-RNVAIK---KLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 89 FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR------AMEC-- 140
+ + T S + + M ++C I LD R M C
Sbjct: 88 LLN--------VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 139
Query: 141 --LHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
LHS GIIHRDLKP N+++ D T+K+ DFGLAR + MMT E T + APE+
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPEVVTRYYRAPEV 196
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 112/273 (41%), Gaps = 61/273 (22%)
Query: 32 IGEGAHAKVY------EGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+GEG KV EG + VA+K + PE + +E+ +L + H N
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSL----KPESGGNHIADLKKEIEILRNLYHEN 72
Query: 86 LVKFIGACKEP---VMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLH 142
+VK+ G C E + ++ E L G+L++YL + + +++ + +A+ I + M+ L
Sbjct: 73 IVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK-INLKQQLKYAVQICKGMDYLG 131
Query: 143 SHGIIHRDLKPENLLLTEDLKTIKLADFGLARE-ESLTEMMTAETGTYR---WMAPE--- 195
S +HRDL N+L+ E +K+ DFGL + E+ E T + W APE
Sbjct: 132 SRQYVHRDLAARNVLV-ESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 190
Query: 196 ----------------LYSTVTLRQGEKK------------HYNHKNVR----------- 216
L+ +T + H R
Sbjct: 191 QSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRL 250
Query: 217 PSAENVPEELSIILTSCWKEDPNARPNFTQIIQ 249
P N P+E+ ++ CW+ P+ R +F +I+
Sbjct: 251 PCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE 283
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 119/274 (43%), Gaps = 54/274 (19%)
Query: 31 RIGEGAHAKVYEGKYKN--QTVAIKIVHKGETPEEIAKKESR--FAREVAMLSRVQHRNL 86
+IGEG+ V ++ + VA+K + ++ K++ R EV ++ QH N+
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKM-------DLRKQQRRELLFNEVVIMRDYQHENV 210
Query: 87 VKFIGA-CKEPVMVIVTELLSGGTLRKYLLNMR---PRCLDVCVAIGFALDIARAMECLH 142
V+ + + +V E L GG L + + R + VC+A+ +A+ LH
Sbjct: 211 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAV------LQALSVLH 264
Query: 143 SHGIIHRDLKPENLLLTEDLKTIKLADFGL-AREESLTEMMTAETGTYRWMAPELYS--- 198
+ G+IHRD+K +++LLT D + +KL+DFG A+ GT WMAPEL S
Sbjct: 265 AQGVIHRDIKSDSILLTHDGR-VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP 323
Query: 199 -------------TVTLRQGEKKHYN----------HKNVRPSAEN---VPEELSIILTS 232
+ + GE ++N N+ P +N V L L
Sbjct: 324 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDR 383
Query: 233 CWKEDPNARPNFTQIIQMLLNYLSAIAPPEPMIP 266
DP R ++++ +L+ PP ++P
Sbjct: 384 LLVRDPAQRATAAELLKH--PFLAKAGPPASIVP 415
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 81/178 (45%), Gaps = 26/178 (14%)
Query: 32 IGEGAHAKV---YEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
IG GA V Y+ ++ VAIK K P + R RE+ ++ V H+N++
Sbjct: 32 IGSGAQGIVCAAYDAVL-DRNVAIK---KLSRPFQNQTHAKRAYRELVLMKXVNHKNIIS 87
Query: 89 FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR------AMEC-- 140
+ + T + + L M ++C I LD R M C
Sbjct: 88 LLN--------VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 139
Query: 141 --LHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
LHS GIIHRDLKP N+++ D T+K+ DFGLAR + MMT T + APE+
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSD-XTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 82/184 (44%), Gaps = 21/184 (11%)
Query: 28 VGPR------IGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRV 81
VGPR IGEGA+ V Y N +++ K +P E R RE+ +L
Sbjct: 23 VGPRYTNLSYIGEGAYGMVCSA-YDNVN-KVRVAIKKISPFEHQTYCQRTLREIKILLAF 80
Query: 82 QHRNLVKFIGACKEPVM-----VIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+H N++ + P + V + + L L K L +C F I R
Sbjct: 81 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY---FLYQILR 137
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR----EESLTEMMTAETGTYRWM 192
++ +HS ++HRDLKP NLLL +K+ DFGLAR + T +T T +
Sbjct: 138 GLKYIHSANVLHRDLKPSNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVATRWYR 196
Query: 193 APEL 196
APE+
Sbjct: 197 APEI 200
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 90/174 (51%), Gaps = 10/174 (5%)
Query: 28 VGPRIGEGAHAKVYEGKYKNQTV--AIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
V +G+GA + V +K + A KI++ T + A+ + RE + ++QH N
Sbjct: 10 VKEELGKGAFSVVRRCVHKTTGLEFAAKIIN---TKKLSARDFQKLEREARICRKLQHPN 66
Query: 86 LVKFIGACKEPVM-VIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
+V+ + +E +V +L++GG L + ++ A I ++ HS+
Sbjct: 67 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHSN 124
Query: 145 GIIHRDLKPENLLLTEDLK--TIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
GI+HR+LKPENLLL K +KLADFGLA E + +E GT +++PE+
Sbjct: 125 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEV 178
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 87/173 (50%), Gaps = 13/173 (7%)
Query: 32 IGEGAHAKVYE-----GKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNL 86
+G+G + KV++ G + A+K++ K AK + E +L V+H +
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRN-AKDTAHTKAERNILEEVKHPFI 83
Query: 87 VKFIGACKEP-VMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
V I A + + ++ E LSGG L ++ R A + +I+ A+ LH G
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGEL--FMQLEREGIFMEDTACFYLAEISMALGHLHQKG 141
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAET--GTYRWMAPEL 196
II+RDLKPEN++L +KL DFGL + ES+ + T GT +MAPE+
Sbjct: 142 IIYRDLKPENIMLNHQ-GHVKLTDFGLCK-ESIHDGTVTHTFCGTIEYMAPEI 192
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 90/174 (51%), Gaps = 10/174 (5%)
Query: 28 VGPRIGEGAHAKVYEGKYKNQTV--AIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
V +G+GA + V +K + A KI++ T + A+ + RE + ++QH N
Sbjct: 33 VKEELGKGAFSVVRRCVHKTTGLEFAAKIIN---TKKLSARDFQKLEREARICRKLQHPN 89
Query: 86 LVKFIGACKEPVM-VIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
+V+ + +E +V +L++GG L + ++ A I ++ HS+
Sbjct: 90 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHSN 147
Query: 145 GIIHRDLKPENLLLTEDLK--TIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
GI+HR+LKPENLLL K +KLADFGLA E + +E GT +++PE+
Sbjct: 148 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEV 201
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 32 IGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK- 88
+G+G+ KV+ ++K NQ AIK + K + + + + V L+ +H L
Sbjct: 25 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA-WEHPFLTHM 83
Query: 89 FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
F + + V E L+GG L ++ + D+ A +A +I ++ LHS GI++
Sbjct: 84 FCTFQTKENLFFVMEYLNGGDLMYHIQSCHK--FDLSRATFYAAEIILGLQFLHSKGIVY 141
Query: 149 RDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAE-TGTYRWMAPEL 196
RDLK +N+LL +D IK+ADFG+ +E L + T GT ++APE+
Sbjct: 142 RDLKLDNILLDKD-GHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEI 189
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 90/174 (51%), Gaps = 10/174 (5%)
Query: 28 VGPRIGEGAHAKVYEGKYKNQTV--AIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
V +G+GA + V +K + A KI++ T + A+ + RE + ++QH N
Sbjct: 10 VKEELGKGAFSVVRRCVHKTTGLEFAAKIIN---TKKLSARDFQKLEREARICRKLQHPN 66
Query: 86 LVKFIGACKEPVM-VIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
+V+ + +E +V +L++GG L + ++ A I ++ HS+
Sbjct: 67 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHSN 124
Query: 145 GIIHRDLKPENLLLTEDLK--TIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
GI+HR+LKPENLLL K +KLADFGLA E + +E GT +++PE+
Sbjct: 125 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEV 178
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 90/174 (51%), Gaps = 10/174 (5%)
Query: 28 VGPRIGEGAHAKVYEGKYKNQTV--AIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
V +G+GA + V +K + A KI++ T + A+ + RE + ++QH N
Sbjct: 9 VKEELGKGAFSVVRRCVHKTTGLEFAAKIIN---TKKLSARDFQKLEREARICRKLQHPN 65
Query: 86 LVKFIGACKEPVM-VIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
+V+ + +E +V +L++GG L + ++ A I ++ HS+
Sbjct: 66 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHSN 123
Query: 145 GIIHRDLKPENLLLTEDLK--TIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
GI+HR+LKPENLLL K +KLADFGLA E + +E GT +++PE+
Sbjct: 124 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEV 177
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 85/172 (49%), Gaps = 11/172 (6%)
Query: 32 IGEGAHAKVYE-----GKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNL 86
+G+G + KV++ G + A+K++ K AK + E +L V+H +
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRN-AKDTAHTKAERNILEEVKHPFI 83
Query: 87 VKFIGACKEP-VMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
V I A + + ++ E LSGG L ++ R A + +I+ A+ LH G
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGEL--FMQLEREGIFMEDTACFYLAEISMALGHLHQKG 141
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAE-TGTYRWMAPEL 196
II+RDLKPEN++L +KL DFGL +E +T GT +MAPE+
Sbjct: 142 IIYRDLKPENIMLNHQ-GHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEI 192
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 92/192 (47%), Gaps = 19/192 (9%)
Query: 22 DPKHLFVGPRIGEGAHAKVYEGKY-----KNQTVAIKIVHKGETPEEIAKKESRFAREVA 76
DP H + +G+G+ KV+ + A+K++ K + R E
Sbjct: 26 DPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLK---VRDRVRTKMERD 82
Query: 77 MLSRVQHRNLVKFIGACK-EPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFAL-DI 134
+L+ V H +VK A + E + ++ + L GG L + + + F L ++
Sbjct: 83 ILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDL---FTRLSKEVMFTEEDVKFYLAEL 139
Query: 135 ARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAE-TGTYRWMA 193
A ++ LHS GII+RDLKPEN+LL E+ IKL DFGL++E E GT +MA
Sbjct: 140 ALGLDHLHSLGIIYRDLKPENILLDEE-GHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMA 198
Query: 194 PELYSTVTLRQG 205
PE V RQG
Sbjct: 199 PE----VVNRQG 206
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 107/210 (50%), Gaps = 16/210 (7%)
Query: 3 SRSRFYLADELKLDAKWLIDPKHL----FVGPRIGEGAHAKV---YEGKYKNQTVAIKIV 55
SR++ ++ +L +D + + PK L + +G GA +V +E K + VAI+I+
Sbjct: 111 SRNKVFVFFDLTVDDQ-SVYPKALRDEYIMSKTLGSGACGEVKLAFERK-TCKKVAIRII 168
Query: 56 HKGETPEEIAKKES---RFAREVAMLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRK 112
K + A++ E+ +L ++ H ++K IV EL+ GG L
Sbjct: 169 SKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFD 228
Query: 113 YLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIHRDLKPENLLLT--EDLKTIKLADF 170
++ + R + + F + A++ LH +GIIHRDLKPEN+LL+ E+ IK+ DF
Sbjct: 229 KVVGNK-RLKEATCKLYF-YQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDF 286
Query: 171 GLAREESLTEMMTAETGTYRWMAPELYSTV 200
G ++ T +M GT ++APE+ +V
Sbjct: 287 GHSKILGETSLMRTLCGTPTYLAPEVLVSV 316
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 101/232 (43%), Gaps = 23/232 (9%)
Query: 32 IGEGAH--AKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
IG G A++ K N+ VA+K + +GE K + RE+ ++H N+V+F
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGE------KIAANVKREIINHRSLRHPNIVRF 80
Query: 90 IGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
P + IV E SGG L + + N D A F + + H+ + H
Sbjct: 81 KEVILTPTHLAIVMEYASGGELFERICNAGRFSEDE--ARFFFQQLISGVSYCHAMQVCH 138
Query: 149 RDLKPENLLLTED-LKTIKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRQGEK 207
RDLK EN LL +K+ DFG ++ L + GT ++APE+ K
Sbjct: 139 RDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLL--------K 190
Query: 208 KHYNHKNVRPSAENVPEELSIILTSCWK-EDPNARPNFTQIIQMLLNYLSAI 258
K Y+ K + V L ++L + EDP NF + I +LN AI
Sbjct: 191 KEYDGKVADVWSCGV--TLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAI 240
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 107/210 (50%), Gaps = 16/210 (7%)
Query: 3 SRSRFYLADELKLDAKWLIDPKHL----FVGPRIGEGAHAKV---YEGKYKNQTVAIKIV 55
SR++ ++ +L +D + + PK L + +G GA +V +E K + VAI+I+
Sbjct: 125 SRNKVFVFFDLTVDDQ-SVYPKALRDEYIMSKTLGSGACGEVKLAFERK-TCKKVAIRII 182
Query: 56 HKGETPEEIAKKES---RFAREVAMLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRK 112
K + A++ E+ +L ++ H ++K IV EL+ GG L
Sbjct: 183 SKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFD 242
Query: 113 YLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIHRDLKPENLLLT--EDLKTIKLADF 170
++ + R + + F + A++ LH +GIIHRDLKPEN+LL+ E+ IK+ DF
Sbjct: 243 KVVGNK-RLKEATCKLYF-YQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDF 300
Query: 171 GLAREESLTEMMTAETGTYRWMAPELYSTV 200
G ++ T +M GT ++APE+ +V
Sbjct: 301 GHSKILGETSLMRTLCGTPTYLAPEVLVSV 330
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 88/178 (49%), Gaps = 27/178 (15%)
Query: 32 IGEGAHAKVY--EGKYKNQTVAIKIVHKG---ETPEEIAKKESRFAREVAMLSRVQHRNL 86
+GEGA+ +V + + VA+KIV + PE I K E+ + + + H N+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-------EICINAMLNHENV 67
Query: 87 VKFIGACKEP-VMVIVTELLSGGTLRKYLLNMRPRCLDVCV----AIGFALDIARAMECL 141
VKF G +E + + E SGG L + P D+ + A F + + L
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGEL---FDRIEP---DIGMPEPDAQRFFHQLMAGVVYL 121
Query: 142 HSHGIIHRDLKPENLLLTEDLKTIKLADFGLA---REESLTEMMTAETGTYRWMAPEL 196
H GI HRD+KPENLLL E +K++DFGLA R + ++ GT ++APEL
Sbjct: 122 HGIGITHRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 89/179 (49%), Gaps = 29/179 (16%)
Query: 31 RIGEGAHAKVYEGKYK--NQTVAIKIV---HKGETPEEIAKKESRFAREVAMLSRVQHRN 85
++GEG +A VY+GK K + VA+K + H+ P REV++L ++H N
Sbjct: 9 KLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAP-------CTAIREVSLLKDLKHAN 61
Query: 86 LVKFIGAC-KEPVMVIVTELLSGGTLRKYL------LNMRPRCLDVCVAIGFALDIARAM 138
+V E + +V E L L++YL +NM L F + R +
Sbjct: 62 IVTLHDIIHTEKSLTLVFEYLDKD-LKQYLDDCGNIINMHNVKL-------FLFQLLRGL 113
Query: 139 ECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESL-TEMMTAETGTYRWMAPEL 196
H ++HRDLKP+NLL+ E +KLADFGLAR +S+ T+ E T + P++
Sbjct: 114 AYCHRQKVLHRDLKPQNLLINER-GELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDI 171
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 87/178 (48%), Gaps = 27/178 (15%)
Query: 32 IGEGAHAKVY--EGKYKNQTVAIKIVHKG---ETPEEIAKKESRFAREVAMLSRVQHRNL 86
+GEGA+ +V + + VA+KIV + PE I K E+ + + H N+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-------EICINKMLNHENV 66
Query: 87 VKFIGACKEP-VMVIVTELLSGGTLRKYLLNMRPRCLDVCV----AIGFALDIARAMECL 141
VKF G +E + + E SGG L + P D+ + A F + + L
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGEL---FDRIEP---DIGMPEPDAQRFFHQLMAGVVYL 120
Query: 142 HSHGIIHRDLKPENLLLTEDLKTIKLADFGLA---REESLTEMMTAETGTYRWMAPEL 196
H GI HRD+KPENLLL E +K++DFGLA R + ++ GT ++APEL
Sbjct: 121 HGIGITHRDIKPENLLLDE-RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 87/178 (48%), Gaps = 27/178 (15%)
Query: 32 IGEGAHAKVY--EGKYKNQTVAIKIVHKG---ETPEEIAKKESRFAREVAMLSRVQHRNL 86
+GEGA+ +V + + VA+KIV + PE I K E+ + + H N+
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-------EICINKMLNHENV 65
Query: 87 VKFIGACKEP-VMVIVTELLSGGTLRKYLLNMRPRCLDVCV----AIGFALDIARAMECL 141
VKF G +E + + E SGG L + P D+ + A F + + L
Sbjct: 66 VKFYGHRREGNIQYLFLEYCSGGEL---FDRIEP---DIGMPEPDAQRFFHQLMAGVVYL 119
Query: 142 HSHGIIHRDLKPENLLLTEDLKTIKLADFGLA---REESLTEMMTAETGTYRWMAPEL 196
H GI HRD+KPENLLL E +K++DFGLA R + ++ GT ++APEL
Sbjct: 120 HGIGITHRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 176
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 87/178 (48%), Gaps = 27/178 (15%)
Query: 32 IGEGAHAKVY--EGKYKNQTVAIKIVHKG---ETPEEIAKKESRFAREVAMLSRVQHRNL 86
+GEGA+ +V + + VA+KIV + PE I K E+ + + H N+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-------EICINKMLNHENV 66
Query: 87 VKFIGACKEP-VMVIVTELLSGGTLRKYLLNMRPRCLDVCV----AIGFALDIARAMECL 141
VKF G +E + + E SGG L + P D+ + A F + + L
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGEL---FDRIEP---DIGMPEPDAQRFFHQLMAGVVYL 120
Query: 142 HSHGIIHRDLKPENLLLTEDLKTIKLADFGLA---REESLTEMMTAETGTYRWMAPEL 196
H GI HRD+KPENLLL E +K++DFGLA R + ++ GT ++APEL
Sbjct: 121 HGIGITHRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 87/178 (48%), Gaps = 27/178 (15%)
Query: 32 IGEGAHAKVY--EGKYKNQTVAIKIVHKG---ETPEEIAKKESRFAREVAMLSRVQHRNL 86
+GEGA+ +V + + VA+KIV + PE I K E+ + + H N+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-------EIXINKMLNHENV 67
Query: 87 VKFIGACKEP-VMVIVTELLSGGTLRKYLLNMRPRCLDVCV----AIGFALDIARAMECL 141
VKF G +E + + E SGG L + P D+ + A F + + L
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGEL---FDRIEP---DIGMPEPDAQRFFHQLMAGVVYL 121
Query: 142 HSHGIIHRDLKPENLLLTEDLKTIKLADFGLA---REESLTEMMTAETGTYRWMAPEL 196
H GI HRD+KPENLLL E +K++DFGLA R + ++ GT ++APEL
Sbjct: 122 HGIGITHRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 178
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 87/178 (48%), Gaps = 27/178 (15%)
Query: 32 IGEGAHAKVY--EGKYKNQTVAIKIVHKG---ETPEEIAKKESRFAREVAMLSRVQHRNL 86
+GEGA+ +V + + VA+KIV + PE I K E+ + + H N+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-------EICINKMLNHENV 67
Query: 87 VKFIGACKEP-VMVIVTELLSGGTLRKYLLNMRPRCLDVCV----AIGFALDIARAMECL 141
VKF G +E + + E SGG L + P D+ + A F + + L
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGEL---FDRIEP---DIGMPEPDAQRFFHQLMAGVVYL 121
Query: 142 HSHGIIHRDLKPENLLLTEDLKTIKLADFGLA---REESLTEMMTAETGTYRWMAPEL 196
H GI HRD+KPENLLL E +K++DFGLA R + ++ GT ++APEL
Sbjct: 122 HGIGITHRDIKPENLLLDE-RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 87/178 (48%), Gaps = 27/178 (15%)
Query: 32 IGEGAHAKVY--EGKYKNQTVAIKIVHKG---ETPEEIAKKESRFAREVAMLSRVQHRNL 86
+GEGA+ +V + + VA+KIV + PE I K E+ + + H N+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-------EIXINKMLNHENV 66
Query: 87 VKFIGACKEP-VMVIVTELLSGGTLRKYLLNMRPRCLDVCV----AIGFALDIARAMECL 141
VKF G +E + + E SGG L + P D+ + A F + + L
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGEL---FDRIEP---DIGMPEPDAQRFFHQLMAGVVYL 120
Query: 142 HSHGIIHRDLKPENLLLTEDLKTIKLADFGLA---REESLTEMMTAETGTYRWMAPEL 196
H GI HRD+KPENLLL E +K++DFGLA R + ++ GT ++APEL
Sbjct: 121 HGIGITHRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 81/178 (45%), Gaps = 26/178 (14%)
Query: 32 IGEGAHAKV---YEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
IG GA V Y+ ++ VAIK K P + R RE+ ++ V H+N++
Sbjct: 70 IGSGAQGIVCAAYDAVL-DRNVAIK---KLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 125
Query: 89 FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR------AMEC-- 140
+ + T + + L M ++C I LD R M C
Sbjct: 126 LLN--------VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 177
Query: 141 --LHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
LHS GIIHRDLKP N+++ D T+K+ DFGLAR + MMT T + APE+
Sbjct: 178 KHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 234
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 87/178 (48%), Gaps = 27/178 (15%)
Query: 32 IGEGAHAKVY--EGKYKNQTVAIKIVHKG---ETPEEIAKKESRFAREVAMLSRVQHRNL 86
+GEGA+ +V + + VA+KIV + PE I K E+ + + H N+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-------EICINKMLNHENV 66
Query: 87 VKFIGACKEP-VMVIVTELLSGGTLRKYLLNMRPRCLDVCV----AIGFALDIARAMECL 141
VKF G +E + + E SGG L + P D+ + A F + + L
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGEL---FDRIEP---DIGMPEPDAQRFFHQLMAGVVYL 120
Query: 142 HSHGIIHRDLKPENLLLTEDLKTIKLADFGLA---REESLTEMMTAETGTYRWMAPEL 196
H GI HRD+KPENLLL E +K++DFGLA R + ++ GT ++APEL
Sbjct: 121 HGIGITHRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 87/178 (48%), Gaps = 27/178 (15%)
Query: 32 IGEGAHAKVY--EGKYKNQTVAIKIVHKG---ETPEEIAKKESRFAREVAMLSRVQHRNL 86
+GEGA+ +V + + VA+KIV + PE I K E+ + + H N+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-------EICINKMLNHENV 66
Query: 87 VKFIGACKEP-VMVIVTELLSGGTLRKYLLNMRPRCLDVCV----AIGFALDIARAMECL 141
VKF G +E + + E SGG L + P D+ + A F + + L
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGEL---FDRIEP---DIGMPEPDAQRFFHQLMAGVVYL 120
Query: 142 HSHGIIHRDLKPENLLLTEDLKTIKLADFGLA---REESLTEMMTAETGTYRWMAPEL 196
H GI HRD+KPENLLL E +K++DFGLA R + ++ GT ++APEL
Sbjct: 121 HGIGITHRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 84/186 (45%), Gaps = 25/186 (13%)
Query: 28 VGPR------IGEGAHAKVYEG--KYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLS 79
VGPR IGEGA+ V + VAIK + +P E R RE+ +L
Sbjct: 41 VGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKI----SPFEHQTYCQRTLREIQILL 96
Query: 80 RVQHRNLVKFIGACKEPVM-----VIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDI 134
R +H N++ + + V + + L L K L + + +C F I
Sbjct: 97 RFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICY---FLYQI 153
Query: 135 ARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR----EESLTEMMTAETGTYR 190
R ++ +HS ++HRDLKP NLL+ +K+ DFGLAR E T +T T
Sbjct: 154 LRGLKYIHSANVLHRDLKPSNLLINTTCD-LKICDFGLARIADPEHDHTGFLTEXVATRW 212
Query: 191 WMAPEL 196
+ APE+
Sbjct: 213 YRAPEI 218
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 87/178 (48%), Gaps = 27/178 (15%)
Query: 32 IGEGAHAKVY--EGKYKNQTVAIKIVHKG---ETPEEIAKKESRFAREVAMLSRVQHRNL 86
+GEGA+ +V + + VA+KIV + PE I K E+ + + H N+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-------EICINKMLNHENV 66
Query: 87 VKFIGACKEP-VMVIVTELLSGGTLRKYLLNMRPRCLDVCV----AIGFALDIARAMECL 141
VKF G +E + + E SGG L + P D+ + A F + + L
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGEL---FDRIEP---DIGMPEPDAQRFFHQLMAGVVYL 120
Query: 142 HSHGIIHRDLKPENLLLTEDLKTIKLADFGLA---REESLTEMMTAETGTYRWMAPEL 196
H GI HRD+KPENLLL E +K++DFGLA R + ++ GT ++APEL
Sbjct: 121 HGIGITHRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 87/178 (48%), Gaps = 27/178 (15%)
Query: 32 IGEGAHAKVY--EGKYKNQTVAIKIVHKG---ETPEEIAKKESRFAREVAMLSRVQHRNL 86
+GEGA+ +V + + VA+KIV + PE I K E+ + + H N+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-------EICINKMLNHENV 66
Query: 87 VKFIGACKEP-VMVIVTELLSGGTLRKYLLNMRPRCLDVCV----AIGFALDIARAMECL 141
VKF G +E + + E SGG L + P D+ + A F + + L
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGEL---FDRIEP---DIGMPEPDAQRFFHQLMAGVVYL 120
Query: 142 HSHGIIHRDLKPENLLLTEDLKTIKLADFGLA---REESLTEMMTAETGTYRWMAPEL 196
H GI HRD+KPENLLL E +K++DFGLA R + ++ GT ++APEL
Sbjct: 121 HGIGITHRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 81/178 (45%), Gaps = 26/178 (14%)
Query: 32 IGEGAHAKV---YEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
IG GA V Y+ ++ VAIK K P + R RE+ ++ V H+N++
Sbjct: 70 IGSGAQGIVCAAYDAVL-DRNVAIK---KLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 125
Query: 89 FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR------AMEC-- 140
+ + T + + L M ++C I LD R M C
Sbjct: 126 LLN--------VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 177
Query: 141 --LHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
LHS GIIHRDLKP N+++ D T+K+ DFGLAR + MMT T + APE+
Sbjct: 178 KHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 234
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 81/178 (45%), Gaps = 26/178 (14%)
Query: 32 IGEGAHAKV---YEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
IG GA V Y+ ++ VAIK K P + R RE+ ++ V H+N++
Sbjct: 32 IGSGAQGIVCAAYDAVL-DRNVAIK---KLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 87
Query: 89 FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR------AMEC-- 140
+ + T + + L M ++C I LD R M C
Sbjct: 88 LLN--------VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 139
Query: 141 --LHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
LHS GIIHRDLKP N+++ D T+K+ DFGLAR + MMT T + APE+
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 87/178 (48%), Gaps = 27/178 (15%)
Query: 32 IGEGAHAKVY--EGKYKNQTVAIKIVHKG---ETPEEIAKKESRFAREVAMLSRVQHRNL 86
+GEGA+ +V + + VA+KIV + PE I K E+ + + H N+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-------EICINKMLNHENV 67
Query: 87 VKFIGACKEP-VMVIVTELLSGGTLRKYLLNMRPRCLDVCV----AIGFALDIARAMECL 141
VKF G +E + + E SGG L + P D+ + A F + + L
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGEL---FDRIEP---DIGMPEPDAQRFFHQLMAGVVYL 121
Query: 142 HSHGIIHRDLKPENLLLTEDLKTIKLADFGLA---REESLTEMMTAETGTYRWMAPEL 196
H GI HRD+KPENLLL E +K++DFGLA R + ++ GT ++APEL
Sbjct: 122 HGIGITHRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 81/178 (45%), Gaps = 26/178 (14%)
Query: 32 IGEGAHAKV---YEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
IG GA V Y+ ++ VAIK K P + R RE+ ++ V H+N++
Sbjct: 26 IGSGAQGIVCAAYDAVL-DRNVAIK---KLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 81
Query: 89 FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR------AMEC-- 140
+ + T + + L M ++C I LD R M C
Sbjct: 82 LLN--------VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 133
Query: 141 --LHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
LHS GIIHRDLKP N+++ D T+K+ DFGLAR + MMT T + APE+
Sbjct: 134 KHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 190
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 81/178 (45%), Gaps = 26/178 (14%)
Query: 32 IGEGAHAKV---YEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
IG GA V Y+ ++ VAIK K P + R RE+ ++ V H+N++
Sbjct: 33 IGSGAQGIVCAAYDAVL-DRNVAIK---KLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 88
Query: 89 FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR------AMEC-- 140
+ + T + + L M ++C I LD R M C
Sbjct: 89 LLN--------VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 140
Query: 141 --LHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
LHS GIIHRDLKP N+++ D T+K+ DFGLAR + MMT T + APE+
Sbjct: 141 KHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 197
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 87/178 (48%), Gaps = 27/178 (15%)
Query: 32 IGEGAHAKVY--EGKYKNQTVAIKIVHKG---ETPEEIAKKESRFAREVAMLSRVQHRNL 86
+GEGA+ +V + + VA+KIV + PE I K E+ + + H N+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-------EICINKMLNHENV 66
Query: 87 VKFIGACKEP-VMVIVTELLSGGTLRKYLLNMRPRCLDVCV----AIGFALDIARAMECL 141
VKF G +E + + E SGG L + P D+ + A F + + L
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGEL---FDRIEP---DIGMPEPDAQRFFHQLMAGVVYL 120
Query: 142 HSHGIIHRDLKPENLLLTEDLKTIKLADFGLA---REESLTEMMTAETGTYRWMAPEL 196
H GI HRD+KPENLLL E +K++DFGLA R + ++ GT ++APEL
Sbjct: 121 HGIGITHRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 81/178 (45%), Gaps = 26/178 (14%)
Query: 32 IGEGAHAKV---YEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
IG GA V Y+ ++ VAIK K P + R RE+ ++ V H+N++
Sbjct: 26 IGSGAQGIVCAAYDAVL-DRNVAIK---KLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 81
Query: 89 FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR------AMEC-- 140
+ + T + + L M ++C I LD R M C
Sbjct: 82 LLN--------VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 133
Query: 141 --LHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
LHS GIIHRDLKP N+++ D T+K+ DFGLAR + MMT T + APE+
Sbjct: 134 KHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 190
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 81/178 (45%), Gaps = 26/178 (14%)
Query: 32 IGEGAHAKV---YEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
IG GA V Y+ ++ VAIK K P + R RE+ ++ V H+N++
Sbjct: 32 IGSGAQGIVCAAYDAVL-DRNVAIK---KLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 87
Query: 89 FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR------AMEC-- 140
+ + T + + L M ++C I LD R M C
Sbjct: 88 LLN--------VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 139
Query: 141 --LHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
LHS GIIHRDLKP N+++ D T+K+ DFGLAR + MMT T + APE+
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 81/178 (45%), Gaps = 26/178 (14%)
Query: 32 IGEGAHAKV---YEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
IG GA V Y+ ++ VAIK K P + R RE+ ++ V H+N++
Sbjct: 31 IGSGAQGIVCAAYDAVL-DRNVAIK---KLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 86
Query: 89 FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR------AMEC-- 140
+ + T + + L M ++C I LD R M C
Sbjct: 87 LLN--------VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 138
Query: 141 --LHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
LHS GIIHRDLKP N+++ D T+K+ DFGLAR + MMT T + APE+
Sbjct: 139 KHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 195
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 87/178 (48%), Gaps = 27/178 (15%)
Query: 32 IGEGAHAKVY--EGKYKNQTVAIKIVHKG---ETPEEIAKKESRFAREVAMLSRVQHRNL 86
+GEGA+ +V + + VA+KIV + PE I K E+ + + H N+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-------EICINKMLNHENV 66
Query: 87 VKFIGACKEP-VMVIVTELLSGGTLRKYLLNMRPRCLDVCV----AIGFALDIARAMECL 141
VKF G +E + + E SGG L + P D+ + A F + + L
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGEL---FDRIEP---DIGMPEPDAQRFFHQLMAGVVYL 120
Query: 142 HSHGIIHRDLKPENLLLTEDLKTIKLADFGLA---REESLTEMMTAETGTYRWMAPEL 196
H GI HRD+KPENLLL E +K++DFGLA R + ++ GT ++APEL
Sbjct: 121 HGIGITHRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 81/178 (45%), Gaps = 26/178 (14%)
Query: 32 IGEGAHAKV---YEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
IG GA V Y+ ++ VAIK K P + R RE+ ++ V H+N++
Sbjct: 25 IGSGAQGIVCAAYDAVL-DRNVAIK---KLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 80
Query: 89 FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR------AMEC-- 140
+ + T + + L M ++C I LD R M C
Sbjct: 81 LLN--------VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 132
Query: 141 --LHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
LHS GIIHRDLKP N+++ D T+K+ DFGLAR + MMT T + APE+
Sbjct: 133 KHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 189
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 87/178 (48%), Gaps = 27/178 (15%)
Query: 32 IGEGAHAKVY--EGKYKNQTVAIKIVHKG---ETPEEIAKKESRFAREVAMLSRVQHRNL 86
+GEGA+ +V + + VA+KIV + PE I K E+ + + H N+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-------EICINKMLNHENV 67
Query: 87 VKFIGACKEP-VMVIVTELLSGGTLRKYLLNMRPRCLDVCV----AIGFALDIARAMECL 141
VKF G +E + + E SGG L + P D+ + A F + + L
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGEL---FDRIEP---DIGMPEPDAQRFFHQLMAGVVYL 121
Query: 142 HSHGIIHRDLKPENLLLTEDLKTIKLADFGLA---REESLTEMMTAETGTYRWMAPEL 196
H GI HRD+KPENLLL E +K++DFGLA R + ++ GT ++APEL
Sbjct: 122 HGIGITHRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 82/171 (47%), Gaps = 9/171 (5%)
Query: 31 RIGEGAHAKVY--EGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
++G GA+ +V + K AIKI+ K EVA+L ++ H N++K
Sbjct: 28 KLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVT--TTSNSGALLDEVAVLKQLDHPNIMK 85
Query: 89 FIGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGII 147
++ +V E+ GG L ++ +R + +V A+ + LH H I+
Sbjct: 86 LYEFFEDKRNYYLVMEVYRGGELFDEII-LRQKFSEVDAAV-IMKQVLSGTTYLHKHNIV 143
Query: 148 HRDLKPENLLLTEDLKT--IKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
HRDLKPENLLL + IK+ DFGL+ + M GT ++APE+
Sbjct: 144 HRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEV 194
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 81/178 (45%), Gaps = 26/178 (14%)
Query: 32 IGEGAHAKV---YEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
IG GA V Y+ ++ VAIK K P + R RE+ ++ V H+N++
Sbjct: 33 IGSGAQGIVCAAYDAVL-DRNVAIK---KLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 88
Query: 89 FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR------AMEC-- 140
+ + T + + L M ++C I LD R M C
Sbjct: 89 LLN--------VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 140
Query: 141 --LHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
LHS GIIHRDLKP N+++ D T+K+ DFGLAR + MMT T + APE+
Sbjct: 141 KHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 197
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 87/178 (48%), Gaps = 27/178 (15%)
Query: 32 IGEGAHAKVY--EGKYKNQTVAIKIVHKG---ETPEEIAKKESRFAREVAMLSRVQHRNL 86
+GEGA+ +V + + VA+KIV + PE I K E+ + + H N+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-------EICINKMLNHENV 66
Query: 87 VKFIGACKEP-VMVIVTELLSGGTLRKYLLNMRPRCLDVCV----AIGFALDIARAMECL 141
VKF G +E + + E SGG L + P D+ + A F + + L
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGEL---FDRIEP---DIGMPEPDAQRFFHQLMAGVVYL 120
Query: 142 HSHGIIHRDLKPENLLLTEDLKTIKLADFGLA---REESLTEMMTAETGTYRWMAPEL 196
H GI HRD+KPENLLL E +K++DFGLA R + ++ GT ++APEL
Sbjct: 121 HGIGITHRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 87/178 (48%), Gaps = 27/178 (15%)
Query: 32 IGEGAHAKVY--EGKYKNQTVAIKIVHKG---ETPEEIAKKESRFAREVAMLSRVQHRNL 86
+GEGA+ +V + + VA+KIV + PE I K E+ + + H N+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-------EIXINKMLNHENV 66
Query: 87 VKFIGACKEP-VMVIVTELLSGGTLRKYLLNMRPRCLDVCV----AIGFALDIARAMECL 141
VKF G +E + + E SGG L + P D+ + A F + + L
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGEL---FDRIEP---DIGMPEPDAQRFFHQLMAGVVYL 120
Query: 142 HSHGIIHRDLKPENLLLTEDLKTIKLADFGLA---REESLTEMMTAETGTYRWMAPEL 196
H GI HRD+KPENLLL E +K++DFGLA R + ++ GT ++APEL
Sbjct: 121 HGIGITHRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 87/178 (48%), Gaps = 27/178 (15%)
Query: 32 IGEGAHAKVY--EGKYKNQTVAIKIVHKG---ETPEEIAKKESRFAREVAMLSRVQHRNL 86
+GEGA+ +V + + VA+KIV + PE I K E+ + + H N+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-------EICINKMLNHENV 67
Query: 87 VKFIGACKEP-VMVIVTELLSGGTLRKYLLNMRPRCLDVCV----AIGFALDIARAMECL 141
VKF G +E + + E SGG L + P D+ + A F + + L
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGEL---FDRIEP---DIGMPEPDAQRFFHQLMAGVVYL 121
Query: 142 HSHGIIHRDLKPENLLLTEDLKTIKLADFGLA---REESLTEMMTAETGTYRWMAPEL 196
H GI HRD+KPENLLL E +K++DFGLA R + ++ GT ++APEL
Sbjct: 122 HGIGITHRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 87/178 (48%), Gaps = 27/178 (15%)
Query: 32 IGEGAHAKVY--EGKYKNQTVAIKIVHKG---ETPEEIAKKESRFAREVAMLSRVQHRNL 86
+GEGA+ +V + + VA+KIV + PE I K E+ + + H N+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-------EICINKMLNHENV 67
Query: 87 VKFIGACKEP-VMVIVTELLSGGTLRKYLLNMRPRCLDVCV----AIGFALDIARAMECL 141
VKF G +E + + E SGG L + P D+ + A F + + L
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGEL---FDRIEP---DIGMPEPDAQRFFHQLMAGVVYL 121
Query: 142 HSHGIIHRDLKPENLLLTEDLKTIKLADFGLA---REESLTEMMTAETGTYRWMAPEL 196
H GI HRD+KPENLLL E +K++DFGLA R + ++ GT ++APEL
Sbjct: 122 HGIGITHRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 87/178 (48%), Gaps = 27/178 (15%)
Query: 32 IGEGAHAKVY--EGKYKNQTVAIKIVHKG---ETPEEIAKKESRFAREVAMLSRVQHRNL 86
+GEGA+ +V + + VA+KIV + PE I K E+ + + H N+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-------EICINKMLNHENV 67
Query: 87 VKFIGACKEP-VMVIVTELLSGGTLRKYLLNMRPRCLDVCV----AIGFALDIARAMECL 141
VKF G +E + + E SGG L + P D+ + A F + + L
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGEL---FDRIEP---DIGMPEPDAQRFFHQLMAGVVYL 121
Query: 142 HSHGIIHRDLKPENLLLTEDLKTIKLADFGLA---REESLTEMMTAETGTYRWMAPEL 196
H GI HRD+KPENLLL E +K++DFGLA R + ++ GT ++APEL
Sbjct: 122 HGIGITHRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 9/172 (5%)
Query: 28 VGPRIGEGAHAKVYEGKYKNQT--VAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G +G+G VY + K +A+K++ K + E A E + REV + S ++H N
Sbjct: 38 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 95
Query: 86 LVKFIGACKEPVMV-IVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
+++ G + V ++ E GT+ + L + D + ++A A+ HS
Sbjct: 96 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCHSK 153
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+IHRD+KPENLLL +K+ADFG + + + T GT ++ PE+
Sbjct: 154 RVIHRDIKPENLLLG-SAGELKIADFGWSV-HAPSSRRTTLCGTLDYLPPEM 203
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 81/177 (45%), Gaps = 8/177 (4%)
Query: 22 DPKHLFVGPR-IGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSR 80
DP+ LF R IG G+ VY + + + I + ++ +K +EV L +
Sbjct: 12 DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQK 71
Query: 81 VQHRNLVKFIGA-CKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAME 139
++H N +++ G +E +V E G LL + + L + +
Sbjct: 72 LRHPNTIQYRGCYLREHTAWLVMEYCLGSA--SDLLEVHKKPLQEVEIAAVTHGALQGLA 129
Query: 140 CLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
LHSH +IHRD+K N+LL+E +KL DFG A S+ GT WMAPE+
Sbjct: 130 YLHSHNMIHRDVKAGNILLSEP-GLVKLGDFGSA---SIMAPANXFVGTPYWMAPEV 182
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 82/171 (47%), Gaps = 9/171 (5%)
Query: 31 RIGEGAHAKVY--EGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
++G GA+ +V + K AIKI+ K EVA+L ++ H N++K
Sbjct: 11 KLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVT--TTSNSGALLDEVAVLKQLDHPNIMK 68
Query: 89 FIGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGII 147
++ +V E+ GG L ++ +R + +V A+ + LH H I+
Sbjct: 69 LYEFFEDKRNYYLVMEVYRGGELFDEII-LRQKFSEVDAAV-IMKQVLSGTTYLHKHNIV 126
Query: 148 HRDLKPENLLLTEDLKT--IKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
HRDLKPENLLL + IK+ DFGL+ + M GT ++APE+
Sbjct: 127 HRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEV 177
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 81/177 (45%), Gaps = 8/177 (4%)
Query: 22 DPKHLFVGPR-IGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSR 80
DP+ LF R IG G+ VY + + + I + ++ +K +EV L +
Sbjct: 51 DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQK 110
Query: 81 VQHRNLVKFIGA-CKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAME 139
++H N +++ G +E +V E G LL + + L + +
Sbjct: 111 LRHPNTIQYRGCYLREHTAWLVMEYCLGSA--SDLLEVHKKPLQEVEIAAVTHGALQGLA 168
Query: 140 CLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
LHSH +IHRD+K N+LL+E +KL DFG A S+ GT WMAPE+
Sbjct: 169 YLHSHNMIHRDVKAGNILLSEP-GLVKLGDFGSA---SIMAPANXFVGTPYWMAPEV 221
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 87/172 (50%), Gaps = 9/172 (5%)
Query: 28 VGPRIGEGAHAKVYEGKYKNQT--VAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G +G+G VY + K +A+K++ K + E A E + REV + S ++H N
Sbjct: 13 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 70
Query: 86 LVKFIGACKEPVMV-IVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
+++ G + V ++ E GT+ + L + D + ++A A+ HS
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCHSK 128
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+IHRD+KPENLLL +K+ADFG + + + T +GT ++ PE+
Sbjct: 129 RVIHRDIKPENLLLG-SAGELKIADFGWSC-HAPSSRRTTLSGTLDYLPPEM 178
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 112/276 (40%), Gaps = 65/276 (23%)
Query: 32 IGEGAHAKVYEGKYK------NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+GEG KV Y + VA+K + P+ S + +E+ +L + H +
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQH----RSGWKQEIDILRTLYHEH 77
Query: 86 LVKFIGACK---EPVMVIVTELLSGGTLRKYLLNMRPR-CLDVCVAIGFALDIARAMECL 141
++K+ G C+ E + +V E + G+LR YL PR + + + FA I M L
Sbjct: 78 IIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL----PRHSIGLAQLLLFAQQICEGMAYL 133
Query: 142 HSHGIIHRDLKPENLLLTEDLKTIKLADFGLARE--ESLTEMMTAETGT--YRWMAPE-- 195
HS IHR+L N+LL D + +K+ DFGLA+ E E G W APE
Sbjct: 134 HSQHYIHRNLAARNVLLDND-RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL 192
Query: 196 -----------------LYSTVT-----------------LRQGE------KKHYNHKNV 215
LY +T + QG+ +
Sbjct: 193 KEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGER 252
Query: 216 RPSAENVPEELSIILTSCWKEDPNARPNFTQIIQML 251
P + P E+ ++ +CW+ + + RP F +I +L
Sbjct: 253 LPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPIL 288
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 91/214 (42%), Gaps = 48/214 (22%)
Query: 32 IGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKFIG 91
+G G V+E K K I E+A++ + REV L++++H +V++
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELARE--KVMREVKALAKLEHPGIVRYFN 70
Query: 92 ACKEPVMVIVTELLSGGTLRKYLLN-------------MRPRCL------DVCVAIGFAL 132
A E TE L + + YL M RC VC+ I L
Sbjct: 71 AWLEKN---TTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHI--FL 125
Query: 133 DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLA--------REESLTEM--- 181
IA A+E LHS G++HRDLKP N+ T D +K+ DFGL + LT M
Sbjct: 126 QIAEAVEFLHSKGLMHRDLKPSNIFFTMD-DVVKVGDFGLVTAMDQDEEEQTVLTPMPAY 184
Query: 182 --MTAETGTYRWMAPELYSTVTLRQGEKKHYNHK 213
T + GT +M+PE Q Y+HK
Sbjct: 185 ARHTGQVGTKLYMSPE--------QIHGNSYSHK 210
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 90/176 (51%), Gaps = 10/176 (5%)
Query: 27 FVGPRI-GEGAHAKVY--EGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQH 83
+ G R+ G+G+ +V + K Q A+K++ K + ++ K+ REV +L ++ H
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKES--LLREVQLLKQLDH 85
Query: 84 RNLVKFIGACKEP-VMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLH 142
N+ K ++ +V E+ +GG L +++ R R +V A + + H
Sbjct: 86 PNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIIS-RKRFSEVDAA-RIIRQVLSGITYXH 143
Query: 143 SHGIIHRDLKPENLLLTEDLK--TIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+ I+HRDLKPENLLL K I++ DFGL+ ++ + GT ++APE+
Sbjct: 144 KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEV 199
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 9/172 (5%)
Query: 28 VGPRIGEGAHAKVYEGKYKNQT--VAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G +G+G VY + K +A+K++ K + E A E + REV + S ++H N
Sbjct: 29 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 86
Query: 86 LVKFIGACKEPVMV-IVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
+++ G + V ++ E GT+ + L + D + ++A A+ HS
Sbjct: 87 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCHSK 144
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+IHRD+KPENLLL +K+ADFG + + + T GT ++ PE+
Sbjct: 145 RVIHRDIKPENLLLG-SAGELKIADFGWSV-HAPSSRRTTLCGTLDYLPPEM 194
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 78/176 (44%), Gaps = 22/176 (12%)
Query: 32 IGEGAHAKVYEGKYKNQTVAIKI-VHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKFI 90
IG GA V + + I + V K P + R RE+ +L V H+N++ +
Sbjct: 30 IGSGAQGIVCAAF--DTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLL 87
Query: 91 GACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR------AMEC---- 140
+ T + + L M ++C I LD R M C
Sbjct: 88 N--------VFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKH 139
Query: 141 LHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
LHS GIIHRDLKP N+++ D T+K+ DFGLAR S MMT T + APE+
Sbjct: 140 LHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTASTNFMMTPYVVTRYYRAPEV 194
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 9/172 (5%)
Query: 28 VGPRIGEGAHAKVYEGKYKNQ--TVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G +G+G VY + K +A+K++ K + E A E + REV + S ++H N
Sbjct: 12 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 69
Query: 86 LVKFIGACKEPVMV-IVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
+++ G + V ++ E GT+ + L + D + ++A A+ HS
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCHSK 127
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+IHRD+KPENLLL +K+ADFG + + + T GT ++ PE+
Sbjct: 128 RVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEM 177
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 9/172 (5%)
Query: 28 VGPRIGEGAHAKVYEGKYKNQ--TVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G +G+G VY + K +A+K++ K + E A E + REV + S ++H N
Sbjct: 15 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 72
Query: 86 LVKFIGACKEPVMV-IVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
+++ G + V ++ E GT+ + L + D + ++A A+ HS
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCHSK 130
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+IHRD+KPENLLL +K+ADFG + + + T GT ++ PE+
Sbjct: 131 RVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEM 180
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 96/195 (49%), Gaps = 19/195 (9%)
Query: 14 KLDAKWLI-DPKHLF-VGPRIGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKES 69
KLD L P+ +F V ++GEG++ VY+ +K Q VAIK V +EI K
Sbjct: 17 KLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIK--- 73
Query: 70 RFAREVAMLSRVQHRNLVKFIGA-CKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAI 128
E++++ + ++VK+ G+ K + IV E G++ ++ +R + L
Sbjct: 74 ----EISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSD-IIRLRNKTLTEDEIA 128
Query: 129 GFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAET-- 186
+ +E LH IHRD+K N+LL + KLADFG+A + LT+ M
Sbjct: 129 TILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHA-KLADFGVAGQ--LTDXMAKRNXV 185
Query: 187 -GTYRWMAPELYSTV 200
GT WMAPE+ +
Sbjct: 186 IGTPFWMAPEVIQEI 200
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 92/180 (51%), Gaps = 23/180 (12%)
Query: 32 IGEGAHAKVYE--GKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQ-HRNLVK 88
+GEGAHA+V +Q A+KI+ K P I SR REV ML + Q HRN+++
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEK--QPGHI---RSRVFREVEMLYQCQGHRNVLE 75
Query: 89 FIGACKE-PVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGII 147
I +E +V E + GG++ ++ + R + A D+A A++ LH+ GI
Sbjct: 76 LIEFFEEEDRFYLVFEKMRGGSILSHI--HKRRHFNELEASVVVQDVASALDFLHNKGIA 133
Query: 148 HRDLKPENLLLTE--DLKTIKLADFGLAREESLT---------EMMTAETGTYRWMAPEL 196
HRDLKPEN+L + +K+ DF L L E++T G+ +MAPE+
Sbjct: 134 HRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTP-CGSAEYMAPEV 192
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 81/178 (45%), Gaps = 26/178 (14%)
Query: 32 IGEGAHAKV---YEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
IG GA V Y+ + + VAIK K P + R RE+ ++ V H+N++
Sbjct: 32 IGSGAQGIVCAAYDAILE-RNVAIK---KLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 89 FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR------AMEC-- 140
+ + T S + + M ++C I LD R M C
Sbjct: 88 LLN--------VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 139
Query: 141 --LHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
LHS GIIHRDLKP N+++ D T+K+ DFGLAR + MM E T + APE+
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMEPEVVTRYYRAPEV 196
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 87/172 (50%), Gaps = 9/172 (5%)
Query: 28 VGPRIGEGAHAKVYEGKYKNQ--TVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G +G+G VY + K + +A+K++ K + E A E + REV + S ++H N
Sbjct: 9 IGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 66
Query: 86 LVKFIGACKEPVMV-IVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
+++ G + V ++ E GT+ + L + D + ++A A+ HS
Sbjct: 67 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCHSK 124
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+IHRD+KPENLLL +K+ADFG + + + T GT ++ PE+
Sbjct: 125 RVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEM 174
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 81/178 (45%), Gaps = 26/178 (14%)
Query: 32 IGEGAHAKV---YEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
IG GA V Y+ + + VAIK K P + R RE+ ++ V H+N++
Sbjct: 32 IGSGAQGIVCAAYDAILE-RNVAIK---KLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 89 FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR------AMEC-- 140
+ + T S + + M ++C I LD R M C
Sbjct: 88 LLN--------VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 139
Query: 141 --LHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
LHS GIIHRDLKP N+++ D T+K+ DFGLAR + MM E T + APE+
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMEPEVVTRYYRAPEV 196
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 9/172 (5%)
Query: 28 VGPRIGEGAHAKVYEGKYKNQT--VAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G +G+G VY + K +A+K++ K + E A E + REV + S ++H N
Sbjct: 17 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 74
Query: 86 LVKFIGACKEPVMV-IVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
+++ G + V ++ E GT+ + L + D + ++A A+ HS
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCHSK 132
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+IHRD+KPENLLL +K+ADFG + + + T GT ++ PE+
Sbjct: 133 RVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEM 182
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 9/172 (5%)
Query: 28 VGPRIGEGAHAKVYEGKYKNQ--TVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G +G+G VY + K +A+K++ K + E A E + REV + S ++H N
Sbjct: 11 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 68
Query: 86 LVKFIGACKEPVMV-IVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
+++ G + V ++ E GT+ + L + D + ++A A+ HS
Sbjct: 69 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCHSK 126
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+IHRD+KPENLLL +K+ADFG + + + T GT ++ PE+
Sbjct: 127 RVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEM 176
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 91/177 (51%), Gaps = 11/177 (6%)
Query: 32 IGEGAHAKV---YEGKYKNQTVAIKIVHKGETPEEIAKKES---RFAREVAMLSRVQHRN 85
+G GA +V +E K + VAIKI+ K + A++ E+ +L ++ H
Sbjct: 18 LGSGACGEVKLAFERK-TCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 76
Query: 86 LVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
++K IV EL+ GG L ++ + R + + F + A++ LH +G
Sbjct: 77 IIKIKNFFDAEDYYIVLELMEGGELFDKVVGNK-RLKEATCKLYF-YQMLLAVQYLHENG 134
Query: 146 IIHRDLKPENLLLT--EDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPELYSTV 200
IIHRDLKPEN+LL+ E+ IK+ DFG ++ T +M GT ++APE+ +V
Sbjct: 135 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSV 191
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 9/172 (5%)
Query: 28 VGPRIGEGAHAKVYEGKYKNQ--TVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G +G+G VY + K +A+K++ K + E A E + REV + S ++H N
Sbjct: 12 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 69
Query: 86 LVKFIGACKEPVMV-IVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
+++ G + V ++ E GT+ + L + D + ++A A+ HS
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCHSK 127
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+IHRD+KPENLLL +K+ADFG + + + T GT ++ PE+
Sbjct: 128 RVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTELCGTLDYLPPEM 177
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 92/174 (52%), Gaps = 16/174 (9%)
Query: 32 IGEGAHAKVY--EGKYKNQTVAIKIVHKGETPEEIA---KKESRFAREVAMLSRVQHRNL 86
+G G+ +V+ ++ + A+K++ K EI K+ E MLS V H +
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKK-----EIVVRLKQVEHTNDERLMLSIVTHPFI 68
Query: 87 VKFIGACKEPVMV-IVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
++ G ++ + ++ + + GG L + L + + VA +A ++ A+E LHS
Sbjct: 69 IRMWGTFQDAQQIFMIMDYIEGGEL--FSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKD 126
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPELYST 199
II+RDLKPEN+LL ++ IK+ DFG A+ + ++ GT ++APE+ ST
Sbjct: 127 IIYRDLKPENILLDKN-GHIKITDFGFAK--YVPDVTYXLCGTPDYIAPEVVST 177
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 91/177 (51%), Gaps = 11/177 (6%)
Query: 32 IGEGAHAKV---YEGKYKNQTVAIKIVHKGETPEEIAKKES---RFAREVAMLSRVQHRN 85
+G GA +V +E K + VAIKI+ K + A++ E+ +L ++ H
Sbjct: 17 LGSGACGEVKLAFERK-TCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 75
Query: 86 LVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
++K IV EL+ GG L ++ + R + + F + A++ LH +G
Sbjct: 76 IIKIKNFFDAEDYYIVLELMEGGELFDKVVGNK-RLKEATCKLYF-YQMLLAVQYLHENG 133
Query: 146 IIHRDLKPENLLLT--EDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPELYSTV 200
IIHRDLKPEN+LL+ E+ IK+ DFG ++ T +M GT ++APE+ +V
Sbjct: 134 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSV 190
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 70/133 (52%), Gaps = 3/133 (2%)
Query: 66 KKESRFAREVAMLSRVQHRNLVKFIGACK-EPVMVIVTELLSGGTLRKYLLNMRPRCLDV 124
K + E+++++++ H NL++ A + + +V+V E + GG L +++ L
Sbjct: 128 KDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIID-ESYNLTE 186
Query: 125 CVAIGFALDIARAMECLHSHGIIHRDLKPENLL-LTEDLKTIKLADFGLAREESLTEMMT 183
I F I + +H I+H DLKPEN+L + D K IK+ DFGLAR E +
Sbjct: 187 LDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLK 246
Query: 184 AETGTYRWMAPEL 196
GT ++APE+
Sbjct: 247 VNFGTPEFLAPEV 259
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 9/172 (5%)
Query: 28 VGPRIGEGAHAKVYEGKYKNQ--TVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G +G+G VY + K +A+K++ K + E A E + REV + S ++H N
Sbjct: 15 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 72
Query: 86 LVKFIGACKEPVMV-IVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
+++ G + V ++ E GT+ + L + D + ++A A+ HS
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCHSK 130
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+IHRD+KPENLLL +K+ADFG + + + A GT ++ PE+
Sbjct: 131 RVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRAALCGTLDYLPPEM 180
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 91/177 (51%), Gaps = 11/177 (6%)
Query: 32 IGEGAHAKV---YEGKYKNQTVAIKIVHKGETPEEIAKKES---RFAREVAMLSRVQHRN 85
+G GA +V +E K + VAIKI+ K + A++ E+ +L ++ H
Sbjct: 24 LGSGACGEVKLAFERK-TCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 82
Query: 86 LVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
++K IV EL+ GG L ++ + R + + F + A++ LH +G
Sbjct: 83 IIKIKNFFDAEDYYIVLELMEGGELFDKVVGNK-RLKEATCKLYF-YQMLLAVQYLHENG 140
Query: 146 IIHRDLKPENLLLT--EDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPELYSTV 200
IIHRDLKPEN+LL+ E+ IK+ DFG ++ T +M GT ++APE+ +V
Sbjct: 141 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSV 197
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 95/198 (47%), Gaps = 22/198 (11%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKY---KNQTVAIKIVHKGETPEEIAKKESRFAREV 75
W I+ + IG GA A V + Y K + VAIK ++ E+ +E+
Sbjct: 10 WSINRDDYELQEVIGSGATA-VVQAAYCAPKKEKVAIKRIN----LEKCQTSMDELLKEI 64
Query: 76 AMLSRVQHRNLVKFIGA-CKEPVMVIVTELLSGGTLRKYLLNM------RPRCLDVCVAI 128
+S+ H N+V + + + + +V +LLSGG++ + ++ + LD
Sbjct: 65 QAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIA 124
Query: 129 GFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFG----LAREESLTEMMTA 184
++ +E LH +G IHRD+K N+LL ED ++++ADFG LA +T
Sbjct: 125 TILREVLEGLEYLHKNGQIHRDVKAGNILLGED-GSVQIADFGVSAFLATGGDITRNKVR 183
Query: 185 ET--GTYRWMAPELYSTV 200
+T GT WMAPE+ V
Sbjct: 184 KTFVGTPCWMAPEVMEQV 201
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 9/172 (5%)
Query: 28 VGPRIGEGAHAKVYEGKYKNQ--TVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G +G+G VY + K +A+K++ K + E A E + REV + S ++H N
Sbjct: 13 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 70
Query: 86 LVKFIGACKEPVMV-IVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
+++ G + V ++ E GT+ + L + D + ++A A+ HS
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCHSK 128
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+IHRD+KPENLLL +K+ADFG + + + T GT ++ PE+
Sbjct: 129 RVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEM 178
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 86/178 (48%), Gaps = 27/178 (15%)
Query: 32 IGEGAHAKVY--EGKYKNQTVAIKIVHKG---ETPEEIAKKESRFAREVAMLSRVQHRNL 86
+GEGA +V + + VA+KIV + PE I K E+ + + H N+
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-------EICINKMLNHENV 66
Query: 87 VKFIGACKEP-VMVIVTELLSGGTLRKYLLNMRPRCLDVCV----AIGFALDIARAMECL 141
VKF G +E + + E SGG L + P D+ + A F + + L
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGEL---FDRIEP---DIGMPEPDAQRFFHQLMAGVVYL 120
Query: 142 HSHGIIHRDLKPENLLLTEDLKTIKLADFGLA---REESLTEMMTAETGTYRWMAPEL 196
H GI HRD+KPENLLL E +K++DFGLA R + ++ GT ++APEL
Sbjct: 121 HGIGITHRDIKPENLLLDER-DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 91/177 (51%), Gaps = 11/177 (6%)
Query: 32 IGEGAHAKV---YEGKYKNQTVAIKIVHKGETPEEIAKKES---RFAREVAMLSRVQHRN 85
+G GA +V +E K + VAIKI+ K + A++ E+ +L ++ H
Sbjct: 18 LGSGACGEVKLAFERK-TCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 76
Query: 86 LVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
++K IV EL+ GG L ++ + R + + F + A++ LH +G
Sbjct: 77 IIKIKNFFDAEDYYIVLELMEGGELFDKVVGNK-RLKEATCKLYF-YQMLLAVQYLHENG 134
Query: 146 IIHRDLKPENLLLT--EDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPELYSTV 200
IIHRDLKPEN+LL+ E+ IK+ DFG ++ T +M GT ++APE+ +V
Sbjct: 135 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSV 191
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 9/172 (5%)
Query: 28 VGPRIGEGAHAKVYEGKYKNQ--TVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G +G+G VY + K +A+K++ K + E A E + REV + S ++H N
Sbjct: 12 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 69
Query: 86 LVKFIGACKEPVMV-IVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
+++ G + V ++ E GT+ + L + D + ++A A+ HS
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCHSK 127
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+IHRD+KPENLLL +K+ADFG + + + A GT ++ PE+
Sbjct: 128 RVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRAALCGTLDYLPPEM 177
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 91/177 (51%), Gaps = 11/177 (6%)
Query: 32 IGEGAHAKV---YEGKYKNQTVAIKIVHKGETPEEIAKKES---RFAREVAMLSRVQHRN 85
+G GA +V +E K + VAIKI+ K + A++ E+ +L ++ H
Sbjct: 18 LGSGACGEVKLAFERK-TCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 76
Query: 86 LVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
++K IV EL+ GG L ++ + R + + F + A++ LH +G
Sbjct: 77 IIKIKNFFDAEDYYIVLELMEGGELFDKVVGNK-RLKEATCKLYF-YQMLLAVQYLHENG 134
Query: 146 IIHRDLKPENLLLT--EDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPELYSTV 200
IIHRDLKPEN+LL+ E+ IK+ DFG ++ T +M GT ++APE+ +V
Sbjct: 135 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSV 191
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 81/178 (45%), Gaps = 26/178 (14%)
Query: 32 IGEGAHAKV---YEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
IG GA V Y+ + + VAIK K P + R RE+ ++ V H+N++
Sbjct: 26 IGSGAQGIVCAAYDAILE-RNVAIK---KLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 81
Query: 89 FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR------AMEC-- 140
+ + T S + + M ++C I LD R M C
Sbjct: 82 LLN--------VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 133
Query: 141 --LHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
LHS GIIHRDLKP N+++ D T+K+ DFGLAR + MMT T + APE+
Sbjct: 134 KHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 190
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 9/172 (5%)
Query: 28 VGPRIGEGAHAKVYEGKYKNQ--TVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G +G+G VY + K +A+K++ K + E A E + REV + S ++H N
Sbjct: 12 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 69
Query: 86 LVKFIGACKEPVMV-IVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
+++ G + V ++ E GT+ + L + D + ++A A+ HS
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCHSK 127
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+IHRD+KPENLLL +K+ADFG + + + T GT ++ PE+
Sbjct: 128 RVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTXLCGTLDYLPPEM 177
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 9/172 (5%)
Query: 28 VGPRIGEGAHAKVYEGKYKNQ--TVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G +G+G VY + K +A+K++ K + E A E + REV + S ++H N
Sbjct: 17 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 74
Query: 86 LVKFIGACKEPVMV-IVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
+++ G + V ++ E GT+ + L + D + ++A A+ HS
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCHSK 132
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+IHRD+KPENLLL +K+ADFG + + + T GT ++ PE+
Sbjct: 133 RVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEM 182
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 86/177 (48%), Gaps = 23/177 (12%)
Query: 31 RIGEGAHAKV--YEGKYKNQTVAIKIVHKGETPEEIAKKESR--FAREVAMLSRVQHRNL 86
+IGEG+ V K+ + VA+K + ++ K++ R EV ++ H N+
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKM-------DLRKQQRRELLFNEVVIMRDYHHDNV 104
Query: 87 VKFIGA-CKEPVMVIVTELLSGGTLRKYLLNMR---PRCLDVCVAIGFALDIARAMECLH 142
V + + +V E L GG L + + R + VC L + RA+ LH
Sbjct: 105 VDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVC------LSVLRALSYLH 158
Query: 143 SHGIIHRDLKPENLLLTEDLKTIKLADFGL-AREESLTEMMTAETGTYRWMAPELYS 198
+ G+IHRD+K +++LLT D + IKL+DFG A+ GT WMAPE+ S
Sbjct: 159 NQGVIHRDIKSDSILLTSDGR-IKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVIS 214
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 9/172 (5%)
Query: 28 VGPRIGEGAHAKVYEGKYKNQ--TVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G +G+G VY + K +A+K++ K + E A E + REV + S ++H N
Sbjct: 16 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 73
Query: 86 LVKFIGACKEPVMV-IVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
+++ G + V ++ E GT+ + L + D + ++A A+ HS
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCHSK 131
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+IHRD+KPENLLL +K+ADFG + + + T GT ++ PE+
Sbjct: 132 RVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEM 181
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 101/232 (43%), Gaps = 23/232 (9%)
Query: 32 IGEGAH--AKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
IG G A++ K N+ VA+K + +GE +E K RE+ ++H N+V+F
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVK------REIINHRSLRHPNIVRF 80
Query: 90 IGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
P + IV E SGG L + + N D A F + + H+ + H
Sbjct: 81 KEVILTPTHLAIVMEYASGGELFERICNAGRFSED--EARFFFQQLISGVSYCHAMQVCH 138
Query: 149 RDLKPENLLLTED-LKTIKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRQGEK 207
RDLK EN LL +K+ FG ++ L + GT ++APE+ K
Sbjct: 139 RDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLL--------K 190
Query: 208 KHYNHKNVRPSAENVPEELSIILTSCWK-EDPNARPNFTQIIQMLLNYLSAI 258
K Y+ K + V L ++L + EDP NF + I +LN AI
Sbjct: 191 KEYDGKVADVWSCGV--TLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAI 240
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 9/172 (5%)
Query: 28 VGPRIGEGAHAKVYEGKYKNQ--TVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G +G+G VY + K +A+K++ K + E A E + REV + S ++H N
Sbjct: 15 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 72
Query: 86 LVKFIGACKEPVMV-IVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
+++ G + V ++ E GT+ + L + D + ++A A+ HS
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCHSK 130
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+IHRD+KPENLLL +K+ADFG + + + T GT ++ PE+
Sbjct: 131 RVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEM 180
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 81/178 (45%), Gaps = 26/178 (14%)
Query: 32 IGEGAHAKV---YEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
IG GA V Y+ + + VAIK K P + R RE+ ++ V H+N++
Sbjct: 37 IGSGAQGIVCAAYDAILE-RNVAIK---KLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 92
Query: 89 FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR------AMEC-- 140
+ + T S + + M ++C I LD R M C
Sbjct: 93 LLN--------VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 144
Query: 141 --LHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
LHS GIIHRDLKP N+++ D T+K+ DFGLAR + MMT T + APE+
Sbjct: 145 KHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 201
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 81/178 (45%), Gaps = 26/178 (14%)
Query: 32 IGEGAHAKV---YEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
IG GA V Y+ + + VAIK K P + R RE+ ++ V H+N++
Sbjct: 32 IGSGAQGIVCAAYDAILE-RNVAIK---KLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 89 FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR------AMEC-- 140
+ + T S + + M ++C I LD R M C
Sbjct: 88 LLN--------VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 139
Query: 141 --LHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
LHS GIIHRDLKP N+++ D T+K+ DFGLAR + MMT T + APE+
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 77/148 (52%), Gaps = 12/148 (8%)
Query: 54 IVHKGETPEEIAKKESR-FAREVAMLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRK 112
+VH G+ + R F EV S VQ N V+ +PV IV E + G +L++
Sbjct: 114 LVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKR 173
Query: 113 YLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFG- 171
+ + L V AI + L+I A+ LHS G+++ DLKPEN++LTE+ +KL D G
Sbjct: 174 ----SKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE--QLKLIDLGA 227
Query: 172 LAREESLTEMMTAETGTYRWMAPELYST 199
++R S + GT + APE+ T
Sbjct: 228 VSRINSFGYLY----GTPGFQAPEIVRT 251
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 9/172 (5%)
Query: 28 VGPRIGEGAHAKVYEGKYKNQ--TVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G +G+G VY + K +A+K++ K + E A E + REV + S ++H N
Sbjct: 12 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 69
Query: 86 LVKFIGACKEPVMV-IVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
+++ G + V ++ E GT+ + L + D + ++A A+ HS
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCHSK 127
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+IHRD+KPENLLL +K+ADFG + + + T GT ++ PE+
Sbjct: 128 RVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEM 177
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 88/183 (48%), Gaps = 32/183 (17%)
Query: 28 VGPRIGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
V +G GA + VY K K + A+K++ K + KK R E+ +L R+ H N
Sbjct: 57 VESELGRGATSIVYRCKQKGTQKPYALKVLKK-----TVDKKIVR--TEIGVLLRLSHPN 109
Query: 86 LVKFIGACKEPVMV-IVTELLSGGTLRKYLLNMRPRCLDVCVAIGF-----ALD----IA 135
++K + P + +V EL++GG L D V G+ A D I
Sbjct: 110 IIKLKEIFETPTEISLVLELVTGGEL-----------FDRIVEKGYYSERDAADAVKQIL 158
Query: 136 RAMECLHSHGIIHRDLKPENLLLTEDL--KTIKLADFGLAREESLTEMMTAETGTYRWMA 193
A+ LH +GI+HRDLKPENLL +K+ADFGL++ +M GT + A
Sbjct: 159 EAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCA 218
Query: 194 PEL 196
PE+
Sbjct: 219 PEI 221
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 81/178 (45%), Gaps = 26/178 (14%)
Query: 32 IGEGAHAKV---YEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
IG GA V Y+ + + VAIK K P + R RE+ ++ V H+N++
Sbjct: 32 IGSGAQGIVCAAYDAILE-RNVAIK---KLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 89 FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR------AMEC-- 140
+ + T S + + M ++C I LD R M C
Sbjct: 88 LLN--------VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 139
Query: 141 --LHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
LHS GIIHRDLKP N+++ D T+K+ DFGLAR + MMT T + APE+
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 127/310 (40%), Gaps = 54/310 (17%)
Query: 32 IGEGAHAKVYEGKYKNQT------VAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G GA VY+G + VAIK++ + +P+ A KE E +++ V
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPK--ANKE--ILDEAYVMAGVGSPY 80
Query: 86 LVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
+ + +G C + +VT+L+ G L ++ R R L + + + IA+ M L
Sbjct: 81 VSRLLGICLTSTVQLVTQLMPYGCLLDHVRENRGR-LGSQDLLNWCMQIAKGMSYLEDVR 139
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGT---YRWMAPEL------ 196
++HRDL N+L+ +K+ DFGLAR + E G +WMA E
Sbjct: 140 LVHRDLAARNVLVKSP-NHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRF 198
Query: 197 ----------YSTVTLRQGEKKHYNHKNVR------PSAENVPE------ELSIILTSCW 234
+ L K Y+ R E +P+ ++ +I+ CW
Sbjct: 199 THQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQPPICTIDVYMIMVKCW 258
Query: 235 KEDPNARPNFTQIIQMLLNYLSAIAPPEPMIPHRIFNSENTILPPESPGTSSL---MTVR 291
D RP F + L++ S +A P R +N L P SP S+ +
Sbjct: 259 MIDSECRPRFRE----LVSEFSRMARD----PQRFVVIQNEDLGPASPLDSTFYRSLLED 310
Query: 292 DDIGETPKAK 301
DD+G+ A+
Sbjct: 311 DDMGDLVDAE 320
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 90/182 (49%), Gaps = 16/182 (8%)
Query: 26 LFVGPR-IGEGAHAKVY--EGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQ 82
LF+ R +G GA V+ E + IK ++K + + + E+ E+ +L +
Sbjct: 23 LFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEA----EIEVLKSLD 78
Query: 83 HRNLVKFIGACKE-PVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR----A 137
H N++K ++ M IV E GG L + +++ + R ++ G+ ++ + A
Sbjct: 79 HPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQAR--GKALSEGYVAELMKQMMNA 136
Query: 138 MECLHSHGIIHRDLKPENLLL--TEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPE 195
+ HS ++H+DLKPEN+L T IK+ DFGLA E T GT +MAPE
Sbjct: 137 LAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPE 196
Query: 196 LY 197
++
Sbjct: 197 VF 198
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 112/276 (40%), Gaps = 65/276 (23%)
Query: 32 IGEGAHAKVYEGKYK------NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+GEG KV Y + VA+K + P+ S + +E+ +L + H +
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQH----RSGWKQEIDILRTLYHEH 77
Query: 86 LVKFIGACK---EPVMVIVTELLSGGTLRKYLLNMRPR-CLDVCVAIGFALDIARAMECL 141
++K+ G C+ E + +V E + G+LR YL PR + + + FA I M L
Sbjct: 78 IIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL----PRHSIGLAQLLLFAQQICEGMAYL 133
Query: 142 HSHGIIHRDLKPENLLLTEDLKTIKLADFGLARE--ESLTEMMTAETGT--YRWMAPE-- 195
H+ IHR+L N+LL D + +K+ DFGLA+ E E G W APE
Sbjct: 134 HAQHYIHRNLAARNVLLDND-RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL 192
Query: 196 -----------------LYSTVT-----------------LRQGE------KKHYNHKNV 215
LY +T + QG+ +
Sbjct: 193 KEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGER 252
Query: 216 RPSAENVPEELSIILTSCWKEDPNARPNFTQIIQML 251
P + P E+ ++ +CW+ + + RP F +I +L
Sbjct: 253 LPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPIL 288
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 9/172 (5%)
Query: 28 VGPRIGEGAHAKVYEGKYKNQ--TVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G +G+G VY + K +A+K++ K + E A E + REV + S ++H N
Sbjct: 12 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 69
Query: 86 LVKFIGACKEPVMV-IVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
+++ G + V ++ E GT+ + L + D + ++A A+ HS
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCHSK 127
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+IHRD+KPENLLL +K+ADFG + + + T GT ++ PE+
Sbjct: 128 RVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEM 177
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 9/171 (5%)
Query: 28 VGPRIGEGAHAKVYEGKYKNQT--VAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G +G+G VY + K +A+K++ K + E A E + REV + S ++H N
Sbjct: 17 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 74
Query: 86 LVKFIGACKEPVMV-IVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
+++ G + V ++ E GT+ + L + D + ++A A+ HS
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCHSK 132
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPE 195
+IHRD+KPENLLL +K+ADFG + + + T GT ++ PE
Sbjct: 133 RVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPE 181
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 95/198 (47%), Gaps = 22/198 (11%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKY---KNQTVAIKIVHKGETPEEIAKKESRFAREV 75
W I+ + IG GA A V + Y K + VAIK ++ E+ +E+
Sbjct: 5 WSINRDDYELQEVIGSGATA-VVQAAYCAPKKEKVAIKRIN----LEKCQTSMDELLKEI 59
Query: 76 AMLSRVQHRNLVKFIGA-CKEPVMVIVTELLSGGTLRKYLLNM------RPRCLDVCVAI 128
+S+ H N+V + + + + +V +LLSGG++ + ++ + LD
Sbjct: 60 QAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIA 119
Query: 129 GFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFG----LAREESLTEMMTA 184
++ +E LH +G IHRD+K N+LL ED ++++ADFG LA +T
Sbjct: 120 TILREVLEGLEYLHKNGQIHRDVKAGNILLGED-GSVQIADFGVSAFLATGGDITRNKVR 178
Query: 185 ET--GTYRWMAPELYSTV 200
+T GT WMAPE+ V
Sbjct: 179 KTFVGTPCWMAPEVMEQV 196
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 81/178 (45%), Gaps = 26/178 (14%)
Query: 32 IGEGAHAKV---YEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
IG GA V Y+ + + VAIK K P + R RE+ ++ V H+N++
Sbjct: 33 IGSGAQGIVCAAYDAILE-RNVAIK---KLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 88
Query: 89 FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR------AMEC-- 140
+ + T S + + M ++C I LD R M C
Sbjct: 89 LLN--------VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 140
Query: 141 --LHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
LHS GIIHRDLKP N+++ D T+K+ DFGLAR + MMT T + APE+
Sbjct: 141 KHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 197
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 85/172 (49%), Gaps = 9/172 (5%)
Query: 28 VGPRIGEGAHAKVYEGKYKNQ--TVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G +G+G VY + K +A+K++ K + E A E + REV + S ++H N
Sbjct: 13 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 70
Query: 86 LVKFIGACKEPVMV-IVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
+++ G + V ++ E GT+ + L + D + ++A A+ HS
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCHSK 128
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+IHRD+KPENLLL +K+ADFG + + T GT ++ PE+
Sbjct: 129 RVIHRDIKPENLLLG-SAGELKIADFGWSVHAPSSRRDTL-CGTLDYLPPEM 178
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 85/172 (49%), Gaps = 9/172 (5%)
Query: 28 VGPRIGEGAHAKVYEGKYKNQT--VAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G +G+G VY + K +A+K++ K + E A E + REV + S ++H N
Sbjct: 17 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 74
Query: 86 LVKFIGACKEPVMV-IVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
+++ G + V ++ E G + K L + D + ++A A+ HS
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK--FDEQRTATYITELANALSYCHSK 132
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+IHRD+KPENLLL +K+ADFG + + + T GT ++ PE+
Sbjct: 133 RVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEM 182
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 87/172 (50%), Gaps = 9/172 (5%)
Query: 28 VGPRIGEGAHAKVYEGKYKNQ--TVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G +G+G VY + + +A+K++ K T E A E + REV + S ++H N
Sbjct: 16 IGRPLGKGKFGNVYLARERQSKFILALKVLFK--TQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 86 LVKFIGACKEPVMV-IVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
+++ G + V ++ E GT+ + L + D + ++A A+ HS
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR--FDEQRTATYITELANALSYCHSK 131
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+IHRD+KPENLLL + +K+ADFG + + + T GT ++ PE+
Sbjct: 132 RVIHRDIKPENLLLGSN-GELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEM 181
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 68/124 (54%), Gaps = 2/124 (1%)
Query: 74 EVAMLSRVQHRNLVKFIGACK-EPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFAL 132
E +L +V R +V A + + + +V L++GG L+ ++ +M A+ +A
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 133 DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWM 192
+I +E LH I++RDLKPEN+LL +D I+++D GLA + + GT +M
Sbjct: 294 EICCGLEDLHRERIVYRDLKPENILL-DDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYM 352
Query: 193 APEL 196
APE+
Sbjct: 353 APEV 356
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 77/176 (43%), Gaps = 22/176 (12%)
Query: 32 IGEGAHAKVYEGKYKNQTVAIKI-VHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKFI 90
IG GA V + + I + V K P + R RE+ +L V H+N++ +
Sbjct: 32 IGSGAQGIVCAAF--DTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLL 89
Query: 91 GACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR------AMEC---- 140
+ T + + L M ++C I LD R M C
Sbjct: 90 N--------VFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKH 141
Query: 141 LHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
LHS GIIHRDLKP N+++ D T+K+ DFGLAR MMT T + APE+
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTACTNFMMTPYVVTRYYRAPEV 196
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 111/253 (43%), Gaps = 39/253 (15%)
Query: 31 RIGEGAHAKVYEGK--YKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+IG G ++VY VA+K V + + AK + +E+ +L ++ H N++K
Sbjct: 39 KIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMD--AKARADCIKEIDLLKQLNHPNVIK 96
Query: 89 FIGA-CKEPVMVIVTELLSGGTLRKYLLNMRP--RCLDVCVAIGFALDIARAMECLHSHG 145
+ + ++ + IV EL G L + + + + R + + + + A+E +HS
Sbjct: 97 YYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR 156
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAR-EESLTEMMTAETGTYRWMAPE--------- 195
++HRD+KP N+ +T +KL D GL R S T + GT +M+PE
Sbjct: 157 VMHRDIKPANVFITA-TGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNF 215
Query: 196 ----------LYSTVTLRQ---GEK-------KHYNHKNVRP-SAENVPEELSIILTSCW 234
LY L+ G+K K + P +++ EEL ++ C
Sbjct: 216 KSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCI 275
Query: 235 KEDPNARPNFTQI 247
DP RP+ T +
Sbjct: 276 NPDPEKRPDVTYV 288
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 68/124 (54%), Gaps = 2/124 (1%)
Query: 74 EVAMLSRVQHRNLVKFIGACK-EPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFAL 132
E +L +V R +V A + + + +V L++GG L+ ++ +M A+ +A
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 133 DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWM 192
+I +E LH I++RDLKPEN+LL +D I+++D GLA + + GT +M
Sbjct: 294 EICCGLEDLHRERIVYRDLKPENILL-DDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYM 352
Query: 193 APEL 196
APE+
Sbjct: 353 APEV 356
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 76/149 (51%), Gaps = 8/149 (5%)
Query: 28 VGPRIGEGAHAKVYEGKYKNQT--VAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G +G+G VY + K +A+K++ K + E A E + REV + S ++H N
Sbjct: 38 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 95
Query: 86 LVKFIGACKEPVMV-IVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
+++ G + V ++ E GT+ + L + D + ++A A+ HS
Sbjct: 96 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCHSK 153
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLA 173
+IHRD+KPENLLL +K+ADFG +
Sbjct: 154 RVIHRDIKPENLLLG-SAGELKIADFGWS 181
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 100/232 (43%), Gaps = 23/232 (9%)
Query: 32 IGEGAH--AKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
IG G A++ K N+ VA+K + +GE +E K RE+ ++H N+V+F
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVK------REIINHRSLRHPNIVRF 80
Query: 90 IGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
P + IV E SGG L + + N D A F + + H+ + H
Sbjct: 81 KEVILTPTHLAIVMEYASGGELFERICNAGRFSED--EARFFFQQLISGVSYCHAMQVCH 138
Query: 149 RDLKPENLLLTED-LKTIKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRQGEK 207
RDLK EN LL +K+ FG ++ L GT ++APE+ K
Sbjct: 139 RDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLL--------K 190
Query: 208 KHYNHKNVRPSAENVPEELSIILTSCWK-EDPNARPNFTQIIQMLLNYLSAI 258
K Y+ K + V L ++L + EDP NF + I +LN AI
Sbjct: 191 KEYDGKVADVWSCGV--TLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAI 240
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 16/175 (9%)
Query: 31 RIGEGAHAKVYEG--KYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
++GEG + +VY+ N+TVAIK + E + REV++L +QHRN+++
Sbjct: 41 KLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTA---IREVSLLKELQHRNIIE 97
Query: 89 FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAI--GFALDIARAMECLHSHGI 146
+ + + L+KY+ + P DV + + F + + HS
Sbjct: 98 LKSVIHHNHRLHLIFEYAENDLKKYM-DKNP---DVSMRVIKSFLYQLINGVNFCHSRRC 153
Query: 147 IHRDLKPENLLLT----EDLKTIKLADFGLAREESL-TEMMTAETGTYRWMAPEL 196
+HRDLKP+NLLL+ + +K+ DFGLAR + T E T + PE+
Sbjct: 154 LHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEI 208
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 83/175 (47%), Gaps = 19/175 (10%)
Query: 32 IGEGAHAKVYEGKY--KNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
IG G+ VY+ K + VAIK V +G+ + RE+ ++ ++ H N+V+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN---------RELQIMRKLDHCNIVRL 78
Query: 90 ------IGACKEPVMV-IVTELLSGGTLRKYLLNMRPR-CLDVCVAIGFALDIARAMECL 141
G K+ V + +V + + R R + L V + + R++ +
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 142 HSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
HS GI HRD+KP+NLLL D +KL DFG A++ E + + + APEL
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 193
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 96/187 (51%), Gaps = 18/187 (9%)
Query: 21 IDPKHLFVGPRIGEGAHAKV--YEGKYKNQTVAIKIVHKGETPEEIAKKESR-FAREVAM 77
++ H + IG+G+ KV + + A+K ++K + + + E R +E+ +
Sbjct: 12 VNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKC---VERNEVRNVFKELQI 68
Query: 78 LSRVQHRNLVKFIGACK-EPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+ ++H LV + + E M +V +LL GG LR Y L + V + F ++
Sbjct: 69 MQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLR-YHLQQNVHFKEETVKL-FICELVM 126
Query: 137 AMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLA----REESLTEMMTAETGTYRWM 192
A++ L + IIHRD+KP+N+LL E + + DF +A RE +T M GT +M
Sbjct: 127 ALDYLQNQRIIHRDMKPDNILLDEH-GHVHITDFNIAAMLPRETQITTM----AGTKPYM 181
Query: 193 APELYST 199
APE++S+
Sbjct: 182 APEMFSS 188
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 86/172 (50%), Gaps = 9/172 (5%)
Query: 28 VGPRIGEGAHAKVYEGKYKNQT--VAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G +G+G VY + K +A+K++ K + E A E + REV + S ++H N
Sbjct: 14 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 71
Query: 86 LVKFIGACKEPVMV-IVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
+++ G + V ++ E GT+ + L + D + ++A A+ HS
Sbjct: 72 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCHSK 129
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+IHRD+KPENLLL +K+A+FG + + + T GT ++ PE+
Sbjct: 130 RVIHRDIKPENLLLG-SAGELKIANFGWS-VHAPSSRRTTLCGTLDYLPPEM 179
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 9/172 (5%)
Query: 28 VGPRIGEGAHAKVYEGKYKNQ--TVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G +G+G VY + + +A+K++ K T E A E + REV + S ++H N
Sbjct: 16 IGRPLGKGKFGNVYLARERQSKFILALKVLFK--TQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 86 LVKFIGACKEPVMV-IVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
+++ G + V ++ E GT+ + L + D + ++A A+ HS
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR--FDEQRTATYITELANALSYCHSK 131
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+IHRD+KPENLLL + +K+ADFG + + T GT ++ PE+
Sbjct: 132 RVIHRDIKPENLLLGSN-GELKIADFGWSVHAPSSRRDTL-CGTLDYLPPEM 181
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 84/172 (48%), Gaps = 9/172 (5%)
Query: 28 VGPRIGEGAHAKVYEGKYKNQT--VAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G +G+G VY + K +A+K++ K + E A E + REV + S ++H N
Sbjct: 14 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 71
Query: 86 LVKFIGACKEPVMV-IVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
+++ G + V ++ E GT+ + L + D + ++A A+ HS
Sbjct: 72 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCHSK 129
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+IHRD+KPENLLL +K+ADFG + + GT ++ PE+
Sbjct: 130 RVIHRDIKPENLLLG-SAGELKIADFGWSVHAPSSRRXXL-CGTLDYLPPEM 179
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 95/188 (50%), Gaps = 26/188 (13%)
Query: 22 DPKHLFVG-PRIGEGAHAKV--YEGKYKNQTVAIKIVHKGETPEEIAKKESR--FAREVA 76
DP+ L +IGEG+ V K+ + VA+K++ ++ K++ R EV
Sbjct: 42 DPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMM-------DLRKQQRRELLFNEVV 94
Query: 77 MLSRVQHRNLVKFIGA--CKEPVMVIVTELLSGGTLRKYLLNMR---PRCLDVCVAIGFA 131
++ QH N+V+ + E + V++ E L GG L + +R + VC A+
Sbjct: 95 IMRDYQHFNVVEMYKSYLVGEELWVLM-EFLQGGALTDIVSQVRLNEEQIATVCEAV--- 150
Query: 132 LDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESL-TEMMTAETGTYR 190
+A+ LH+ G+IHRD+K +++LLT D + +KL+DFG + S GT
Sbjct: 151 ---LQALAYLHAQGVIHRDIKSDSILLTLDGR-VKLSDFGFCAQISKDVPKRKXLVGTPY 206
Query: 191 WMAPELYS 198
WMAPE+ S
Sbjct: 207 WMAPEVIS 214
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 98/191 (51%), Gaps = 15/191 (7%)
Query: 27 FVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIA--KKESRFAREVAMLSRVQHR 84
+G +GEG++ KV E ++T+ + V + + E+ +E+ +L R++H+
Sbjct: 8 LMGDLLGEGSYGKVKE-VLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHK 66
Query: 85 NLVKFIGAC---KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECL 141
N+++ + ++ M +V E G +++ L ++ + VC A G+ + +E L
Sbjct: 67 NVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYL 125
Query: 142 HSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAET-----GTYRWMAPEL 196
HS GI+H+D+KP NLLLT T+K++ G+A E+L +T G+ + PE+
Sbjct: 126 HSQGIVHKDIKPGNLLLTTG-GTLKISALGVA--EALHPFAADDTCRTSQGSPAFQPPEI 182
Query: 197 YSTVTLRQGEK 207
+ + G K
Sbjct: 183 ANGLDTFSGFK 193
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 86/172 (50%), Gaps = 9/172 (5%)
Query: 28 VGPRIGEGAHAKVYEGKYKNQ--TVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G +G+G VY + K +A+K++ K + E A E + REV + S ++H N
Sbjct: 15 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 72
Query: 86 LVKFIGACKEPVMV-IVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
+++ G + V ++ E GT+ + L + D + ++A A+ HS
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCHSK 130
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+IHRD+KPENLLL +K+A+FG + + + T GT ++ PE+
Sbjct: 131 RVIHRDIKPENLLLG-SAGELKIANFGWS-VHAPSSRRTTLCGTLDYLPPEM 180
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 72/168 (42%), Gaps = 49/168 (29%)
Query: 128 IGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETG 187
I ++ +AR ME L S IHRDL N+LL+E+ +K+ DFGLAR+ +
Sbjct: 202 ISYSFQVARGMEFLSSRKCIHRDLAARNILLSEN-NVVKICDFGLARDIYKNPDYVRKGD 260
Query: 188 T---YRWMAPE-----LYSTVT--------------------------------LRQGEK 207
T +WMAPE +YST + LR+G +
Sbjct: 261 TRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLREGMR 320
Query: 208 KHYNHKNVRPSAENVPEELSIILTSCWKEDPNARPNFTQIIQMLLNYL 255
+R + PE I+L CW DP RP F ++++ L + L
Sbjct: 321 -------MRAPEYSTPEIYQIML-DCWHRDPKERPRFAELVEKLGDLL 360
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 16/113 (14%)
Query: 17 AKWLIDPKHLFVGPRIGEGAHAKVYE----GKYKN---QTVAIKIVHKGETPEEIAKKES 69
+KW + L +G +G GA KV + G K+ +TVA+K++ +G T E
Sbjct: 20 SKWEFARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKA--- 76
Query: 70 RFAREVAMLSRVQHR-NLVKFIGACKE---PVMVIVTELLSGGTLRKYLLNMR 118
E+ +L+ + H N+V +GAC + P+MVIV E G L YL + R
Sbjct: 77 -LMTELKILTHIGHHLNVVNLLGACTKQGGPLMVIV-EYCKYGNLSNYLKSKR 127
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 87/172 (50%), Gaps = 15/172 (8%)
Query: 32 IGEGAHAKV---YEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+G GA+ V Y+ + + Q VA+K K P + R RE+ +L ++H N++
Sbjct: 28 VGSGAYGSVCSAYDARLR-QKVAVK---KLSRPFQSLIHARRTYRELRLLKHLKHENVIG 83
Query: 89 FIGACKEPVMVI--VTELLSGGTLRKYLLNMRPRCLDVCVA-IGFAL-DIARAMECLHSH 144
+ P I +E+ TL LN +C + + F + + R ++ +HS
Sbjct: 84 LLDVFT-PATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSA 142
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
GIIHRDLKP N+ + ED + +++ DFGLAR+ E MT T + APE+
Sbjct: 143 GIIHRDLKPSNVAVNEDCE-LRILDFGLARQAD--EEMTGYVATRWYRAPEI 191
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 80/178 (44%), Gaps = 26/178 (14%)
Query: 32 IGEGAHAKV---YEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
IG GA V Y+ ++ VAIK K P + R RE+ ++ V H+N++
Sbjct: 32 IGSGAQGIVCAAYDAVL-DRNVAIK---KLSRPFQNQTHAKRAYRELVLMKXVNHKNIIS 87
Query: 89 FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR----------AM 138
+ + T + + L M ++ I LD R +
Sbjct: 88 LLN--------VFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGI 139
Query: 139 ECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+ LHS GIIHRDLKP N+++ D T+K+ DFGLAR + MMT T + APE+
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSD-XTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 80/178 (44%), Gaps = 26/178 (14%)
Query: 32 IGEGAHAKV---YEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
IG GA V Y+ ++ VAIK K P + R RE+ ++ V H+N++
Sbjct: 32 IGSGAQGIVCAAYDAVL-DRNVAIK---KLSRPFQNQTHAKRAYRELVLMKXVNHKNIIS 87
Query: 89 FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR------AMEC-- 140
+ + T + + L M ++ I LD R M C
Sbjct: 88 LLN--------VFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGI 139
Query: 141 --LHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
LHS GIIHRDLKP N+++ D T+K+ DFGLAR + MMT T + APE+
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSD-XTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 69/125 (55%), Gaps = 3/125 (2%)
Query: 74 EVAMLSRVQHRNLVKFIGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFAL 132
E+++++++ H L+ A ++ MV++ E LSGG L + + + V I +
Sbjct: 98 EISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEV-INYMR 156
Query: 133 DIARAMECLHSHGIIHRDLKPENLLL-TEDLKTIKLADFGLAREESLTEMMTAETGTYRW 191
++ +H H I+H D+KPEN++ T+ ++K+ DFGLA + + E++ T T +
Sbjct: 157 QACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEF 216
Query: 192 MAPEL 196
APE+
Sbjct: 217 AAPEI 221
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 84/173 (48%), Gaps = 17/173 (9%)
Query: 32 IGEGAHAKV---YEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+G GA+ V Y+ + + Q VA+K K P + R RE+ +L ++H N++
Sbjct: 36 VGSGAYGSVCSAYDARLR-QKVAVK---KLSRPFQSLIHARRTYRELRLLKHLKHENVIG 91
Query: 89 FIGACKEPVMVI--VTELLSGGTLRKYLLNMRPRCL---DVCVAIGFALDIARAMECLHS 143
+ P I +E+ TL LN +C D V + R ++ +HS
Sbjct: 92 LLDVFT-PATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF-LVYQLLRGLKYIHS 149
Query: 144 HGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
GIIHRDLKP N+ + ED +++ DFGLAR+ E MT T + APE+
Sbjct: 150 AGIIHRDLKPSNVAVNED-SELRILDFGLARQAD--EEMTGYVATRWYRAPEI 199
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 76/149 (51%), Gaps = 8/149 (5%)
Query: 28 VGPRIGEGAHAKVYEGKYKNQ--TVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G +G+G VY + K +A+K++ K + E A E + REV + S ++H N
Sbjct: 15 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 72
Query: 86 LVKFIGACKEPVMV-IVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
+++ G + V ++ E GT+ + L + D + ++A A+ HS
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCHSK 130
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLA 173
+IHRD+KPENLLL +K+ADFG +
Sbjct: 131 RVIHRDIKPENLLLG-SAGELKIADFGWS 158
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 76/149 (51%), Gaps = 8/149 (5%)
Query: 28 VGPRIGEGAHAKVYEGKYKNQ--TVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G +G+G VY + K +A+K++ K + E A E + REV + S ++H N
Sbjct: 15 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 72
Query: 86 LVKFIGACKEPVMV-IVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
+++ G + V ++ E GT+ + L + D + ++A A+ HS
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCHSK 130
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLA 173
+IHRD+KPENLLL +K+ADFG +
Sbjct: 131 RVIHRDIKPENLLLG-SAGELKIADFGWS 158
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 10/170 (5%)
Query: 31 RIGEGAHAKVYEGKYKN--QTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+IGEG++ V++ + ++ Q VAIK + E I K RE+ ML +++H NLV
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIA---LREIRMLKQLKHPNLVN 66
Query: 89 FIGACKEPVMV-IVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGII 147
+ + + +V E L + L+ R + + +A+ H H I
Sbjct: 67 LLEVFRRKRRLHLVFEYCDHTVLHE--LDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCI 124
Query: 148 HRDLKPENLLLTEDLKTIKLADFGLAR-EESLTEMMTAETGTYRWMAPEL 196
HRD+KPEN+L+T+ IKL DFG AR ++ E T + +PEL
Sbjct: 125 HRDVKPENILITKH-SVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPEL 173
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 84/172 (48%), Gaps = 9/172 (5%)
Query: 28 VGPRIGEGAHAKVYEGKYKNQ--TVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G +G+G VY + K +A+K++ K + E A E + REV + S ++H N
Sbjct: 12 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 69
Query: 86 LVKFIGACKEPVMV-IVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
+++ G + V ++ E GT+ + L + D + ++A A+ HS
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCHSK 127
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+IHRD+KPENLLL +K+ADFG + + GT ++ PE+
Sbjct: 128 RVIHRDIKPENLLLG-SAGELKIADFGWSVHAPSSRRXXL-CGTLDYLPPEM 177
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 84/172 (48%), Gaps = 15/172 (8%)
Query: 32 IGEGAHAKV---YEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+G GA+ V Y+ + + Q VA+K K P + R RE+ +L ++H N++
Sbjct: 36 VGSGAYGSVCSAYDARLR-QKVAVK---KLSRPFQSLIHARRTYRELRLLKHLKHENVIG 91
Query: 89 FIGACKEPVMVI--VTELLSGGTLRKYLLN--MRPRCLDVCVAIGFALDIARAMECLHSH 144
+ P I +E+ TL LN ++ + L + R ++ +HS
Sbjct: 92 LLDVFT-PATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSA 150
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
GIIHRDLKP N+ + ED +++ DFGLAR+ E MT T + APE+
Sbjct: 151 GIIHRDLKPSNVAVNED-SELRILDFGLARQAD--EEMTGYVATRWYRAPEI 199
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 83/172 (48%), Gaps = 9/172 (5%)
Query: 28 VGPRIGEGAHAKVYEGKYKNQT--VAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G +G+G VY + K +A+K++ K + E A E + REV + S ++H N
Sbjct: 17 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPN 74
Query: 86 LVKFIGACKEPVMV-IVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
+++ G + V ++ E G + K L + D + ++A A+ HS
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK--FDEQRTATYITELANALSYCHSK 132
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+IHRD+KPENLLL +K+ADFG + + GT ++ PE+
Sbjct: 133 RVIHRDIKPENLLLG-SAGELKIADFGWSVHAPSSRRXXL-XGTLDYLPPEM 182
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 80/178 (44%), Gaps = 26/178 (14%)
Query: 32 IGEGAHAKV---YEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
IG GA V Y+ + + VAIK K P + R RE+ ++ V H+N++
Sbjct: 34 IGSGAQGIVCAAYDAILE-RNVAIK---KLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 89
Query: 89 FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR------AMEC-- 140
+ + T S + + M ++C I LD R M C
Sbjct: 90 LLN--------VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 141
Query: 141 --LHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
LHS GIIHRDLKP N+++ D T+K+ DFGLAR + MM T + APE+
Sbjct: 142 KHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMVPFVVTRYYRAPEV 198
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 88/178 (49%), Gaps = 13/178 (7%)
Query: 28 VGPRIGEGAHAKVYEGKYKNQTV--AIKIVHKGETPEE---IAKKESRFAREVAMLSRVQ 82
+G +G G A V + + K+ + A K + K ++ ++++E REV++L +V
Sbjct: 16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREE--IEREVSILRQVL 73
Query: 83 HRNLVKFIGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECL 141
H N++ + +V++ EL+SGG L +L + L A F I + L
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKESLSEEEATSFIKQILDGVNYL 131
Query: 142 HSHGIIHRDLKPENLLLTED---LKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
H+ I H DLKPEN++L + + IKL DFGLA E GT ++APE+
Sbjct: 132 HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEI 189
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 83/175 (47%), Gaps = 19/175 (10%)
Query: 32 IGEGAHAKVYEGKY--KNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
IG G+ VY+ K + VAIK V +G+ + RE+ ++ ++ H N+V+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN---------RELQIMRKLDHCNIVRL 78
Query: 90 ------IGACKEPVMV-IVTELLSGGTLRKYLLNMRPR-CLDVCVAIGFALDIARAMECL 141
G K+ V + +V + + R R + L V + + R++ +
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 142 HSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
HS GI HRD+KP+NLLL D +KL DFG A++ E + + + APEL
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 193
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 112/249 (44%), Gaps = 35/249 (14%)
Query: 32 IGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLS--RVQHRNLVKF 89
+G G V++G + + +IKI + E+ + ++S A ML+ + H ++V+
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 90 IGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIHR 149
+G C + +VT+ L G+L ++ R L + + + + IA+ M L HG++HR
Sbjct: 99 LGLCPGSSLQLVTQYLPLGSLLDHVRQHR-GALGPQLLLNWGVQIAKGMYYLEEHGMVHR 157
Query: 150 DLKPENLLLTEDLKTIKLADFGLAR--EESLTEMMTAETGT-YRWMAPE----------- 195
+L N+LL +++ADFG+A +++ +E T +WMA E
Sbjct: 158 NLAARNVLLKSP-SQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQS 216
Query: 196 --------LYSTVT--------LRQGEKKHYNHKNVRPSAENVPE-ELSIILTSCWKEDP 238
++ +T LR E K R + + ++ +++ CW D
Sbjct: 217 DVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDE 276
Query: 239 NARPNFTQI 247
N RP F ++
Sbjct: 277 NIRPTFKEL 285
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 83/175 (47%), Gaps = 19/175 (10%)
Query: 32 IGEGAHAKVYEGKY--KNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
IG G+ VY+ K + VAIK V +G+ + RE+ ++ ++ H N+V+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN---------RELQIMRKLDHCNIVRL 78
Query: 90 ------IGACKEPVMV-IVTELLSGGTLRKYLLNMRPR-CLDVCVAIGFALDIARAMECL 141
G K+ V + +V + + R R + L V + + R++ +
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 142 HSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
HS GI HRD+KP+NLLL D +KL DFG A++ E + + + APEL
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 193
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 88/178 (49%), Gaps = 13/178 (7%)
Query: 28 VGPRIGEGAHAKVYEGKYKNQTV--AIKIVHKGETPEE---IAKKESRFAREVAMLSRVQ 82
+G +G G A V + + K+ + A K + K ++ ++++E REV++L +V
Sbjct: 16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREE--IEREVSILRQVL 73
Query: 83 HRNLVKFIGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECL 141
H N++ + +V++ EL+SGG L +L + L A F I + L
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKESLSEEEATSFIKQILDGVNYL 131
Query: 142 HSHGIIHRDLKPENLLLTED---LKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
H+ I H DLKPEN++L + + IKL DFGLA E GT ++APE+
Sbjct: 132 HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEI 189
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 88/178 (49%), Gaps = 13/178 (7%)
Query: 28 VGPRIGEGAHAKVYEGKYKNQTV--AIKIVHKGETPEE---IAKKESRFAREVAMLSRVQ 82
+G +G G A V + + K+ + A K + K ++ ++++E REV++L +V
Sbjct: 16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREE--IEREVSILRQVL 73
Query: 83 HRNLVKFIGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECL 141
H N++ + +V++ EL+SGG L +L + L A F I + L
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKESLSEEEATSFIKQILDGVNYL 131
Query: 142 HSHGIIHRDLKPENLLLTED---LKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
H+ I H DLKPEN++L + + IKL DFGLA E GT ++APE+
Sbjct: 132 HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEI 189
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 112/249 (44%), Gaps = 35/249 (14%)
Query: 32 IGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLS--RVQHRNLVKF 89
+G G V++G + + +IKI + E+ + ++S A ML+ + H ++V+
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 90 IGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIHR 149
+G C + +VT+ L G+L ++ R L + + + + IA+ M L HG++HR
Sbjct: 81 LGLCPGSSLQLVTQYLPLGSLLDHVRQHR-GALGPQLLLNWGVQIAKGMYYLEEHGMVHR 139
Query: 150 DLKPENLLLTEDLKTIKLADFGLAR--EESLTEMMTAETGT-YRWMAPE----------- 195
+L N+LL +++ADFG+A +++ +E T +WMA E
Sbjct: 140 NLAARNVLLKSP-SQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQS 198
Query: 196 --------LYSTVT--------LRQGEKKHYNHKNVRPSAENVPE-ELSIILTSCWKEDP 238
++ +T LR E K R + + ++ +++ CW D
Sbjct: 199 DVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDE 258
Query: 239 NARPNFTQI 247
N RP F ++
Sbjct: 259 NIRPTFKEL 267
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 88/178 (49%), Gaps = 13/178 (7%)
Query: 28 VGPRIGEGAHAKVYEGKYKNQTV--AIKIVHKGETPEE---IAKKESRFAREVAMLSRVQ 82
+G +G G A V + + K+ + A K + K ++ ++++E REV++L +V
Sbjct: 16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREE--IEREVSILRQVL 73
Query: 83 HRNLVKFIGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECL 141
H N++ + +V++ EL+SGG L +L + L A F I + L
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKESLSEEEATSFIKQILDGVNYL 131
Query: 142 HSHGIIHRDLKPENLLLTED---LKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
H+ I H DLKPEN++L + + IKL DFGLA E GT ++APE+
Sbjct: 132 HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEI 189
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 88/178 (49%), Gaps = 13/178 (7%)
Query: 28 VGPRIGEGAHAKVYEGKYKNQTV--AIKIVHKGETPEE---IAKKESRFAREVAMLSRVQ 82
+G +G G A V + + K+ + A K + K ++ ++++E REV++L +V
Sbjct: 16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREE--IEREVSILRQVL 73
Query: 83 HRNLVKFIGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECL 141
H N++ + +V++ EL+SGG L +L + L A F I + L
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKESLSEEEATSFIKQILDGVNYL 131
Query: 142 HSHGIIHRDLKPENLLLTED---LKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
H+ I H DLKPEN++L + + IKL DFGLA E GT ++APE+
Sbjct: 132 HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEI 189
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 111/254 (43%), Gaps = 43/254 (16%)
Query: 32 IGEGAHAKVYEGKYKNQT------VAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G GA VY+G + + VAIK + + +P+ A KE E +++ V + +
Sbjct: 17 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKE--ILDEAYVMASVDNPH 72
Query: 86 LVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
+ + +G C + ++T+L+ G L Y+ + + + + + IA+ M L
Sbjct: 73 VCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR 131
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEM-MTAETGTY--RWMAPE-LYSTVT 201
++HRDL N+L+ + +K+ DFGLA+ E AE G +WMA E + +
Sbjct: 132 LVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 190
Query: 202 LRQGEKKHYNH---------------------KNVRPSAENVPE------ELSIILTSCW 234
Q + Y ++ E +P+ ++ +I+ CW
Sbjct: 191 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCW 250
Query: 235 KEDPNARPNFTQII 248
D ++RP F ++I
Sbjct: 251 MIDADSRPKFRELI 264
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 80/178 (44%), Gaps = 26/178 (14%)
Query: 32 IGEGAHAKV---YEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
IG GA V Y+ ++ VAIK K P + R RE+ ++ V H+N++
Sbjct: 25 IGSGAQGIVCAAYDAVL-DRNVAIK---KLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 80
Query: 89 FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR----------AM 138
+ + T + + L M ++ I LD R +
Sbjct: 81 LLN--------VFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGI 132
Query: 139 ECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+ LHS GIIHRDLKP N+++ D T+K+ DFGLAR + MMT T + APE+
Sbjct: 133 KHLHSAGIIHRDLKPSNIVVKSD-XTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 189
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 111/254 (43%), Gaps = 43/254 (16%)
Query: 32 IGEGAHAKVYEGKYKNQT------VAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G GA VY+G + + VAIK + + +P+ A KE E +++ V + +
Sbjct: 29 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKE--ILDEAYVMASVDNPH 84
Query: 86 LVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
+ + +G C + ++T+L+ G L Y+ + + + + + IA+ M L
Sbjct: 85 VCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR 143
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEM-MTAETGTY--RWMAPE-LYSTVT 201
++HRDL N+L+ + +K+ DFGLA+ E AE G +WMA E + +
Sbjct: 144 LVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 202
Query: 202 LRQGEKKHYNH---------------------KNVRPSAENVPE------ELSIILTSCW 234
Q + Y ++ E +P+ ++ +I+ CW
Sbjct: 203 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCW 262
Query: 235 KEDPNARPNFTQII 248
D ++RP F ++I
Sbjct: 263 MIDADSRPKFRELI 276
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 80/178 (44%), Gaps = 26/178 (14%)
Query: 32 IGEGAHAKV---YEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
IG GA V Y+ ++ VAIK K P + R RE+ ++ V H+N++
Sbjct: 32 IGSGAQGIVCAAYDAVL-DRNVAIK---KLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 87
Query: 89 FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR----------AM 138
+ + T + + L M ++ I LD R +
Sbjct: 88 LLN--------VFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGI 139
Query: 139 ECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+ LHS GIIHRDLKP N+++ D T+K+ DFGLAR + MMT T + APE+
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSD-XTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 111/254 (43%), Gaps = 43/254 (16%)
Query: 32 IGEGAHAKVYEGKYKNQT------VAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G GA VY+G + + VAIK + + +P+ A KE E +++ V + +
Sbjct: 48 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKE--ILDEAYVMASVDNPH 103
Query: 86 LVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
+ + +G C + ++T+L+ G L Y+ + + + + + IA+ M L
Sbjct: 104 VCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR 162
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEM-MTAETGTY--RWMAPE-LYSTVT 201
++HRDL N+L+ + +K+ DFGLA+ E AE G +WMA E + +
Sbjct: 163 LVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 221
Query: 202 LRQGEKKHYNH---------------------KNVRPSAENVPE------ELSIILTSCW 234
Q + Y ++ E +P+ ++ +I+ CW
Sbjct: 222 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCW 281
Query: 235 KEDPNARPNFTQII 248
D ++RP F ++I
Sbjct: 282 MIDADSRPKFRELI 295
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 111/254 (43%), Gaps = 43/254 (16%)
Query: 32 IGEGAHAKVYEGKYKNQT------VAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G GA VY+G + + VAIK + + +P+ A KE E +++ V + +
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKE--ILDEAYVMASVDNPH 85
Query: 86 LVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
+ + +G C + ++T+L+ G L Y+ + + + + + IA+ M L
Sbjct: 86 VCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR 144
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEM-MTAETGTY--RWMAPE-LYSTVT 201
++HRDL N+L+ + +K+ DFGLA+ E AE G +WMA E + +
Sbjct: 145 LVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 203
Query: 202 LRQGEKKHYNH---------------------KNVRPSAENVPE------ELSIILTSCW 234
Q + Y ++ E +P+ ++ +I+ CW
Sbjct: 204 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCW 263
Query: 235 KEDPNARPNFTQII 248
D ++RP F ++I
Sbjct: 264 MIDADSRPKFRELI 277
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 80/178 (44%), Gaps = 26/178 (14%)
Query: 32 IGEGAHAKV---YEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
IG GA V Y+ + + VAIK K P + R RE+ ++ V H+N++
Sbjct: 32 IGSGAQGIVCAAYDAILE-RNVAIK---KLSRPFQNQTHAKRAYRELVLMKVVNHKNIIG 87
Query: 89 FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR------AMEC-- 140
+ + T S + + M ++ I LD R M C
Sbjct: 88 LLN--------VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGI 139
Query: 141 --LHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
LHS GIIHRDLKP N+++ D T+K+ DFGLAR + MMT T + APE+
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSD-ATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 111/254 (43%), Gaps = 43/254 (16%)
Query: 32 IGEGAHAKVYEGKYKNQT------VAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G GA VY+G + + VAIK + + +P+ A KE E +++ V + +
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKE--ILDEAYVMASVDNPH 78
Query: 86 LVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
+ + +G C + ++T+L+ G L Y+ + + + + + IA+ M L
Sbjct: 79 VCRLLGICLTSTVQLITQLMPFGXLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEM-MTAETGTY--RWMAPE-LYSTVT 201
++HRDL N+L+ + +K+ DFGLA+ E AE G +WMA E + +
Sbjct: 138 LVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196
Query: 202 LRQGEKKHYNH---------------------KNVRPSAENVPE------ELSIILTSCW 234
Q + Y ++ E +P+ ++ +I+ CW
Sbjct: 197 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCW 256
Query: 235 KEDPNARPNFTQII 248
D ++RP F ++I
Sbjct: 257 MIDADSRPKFRELI 270
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 80/178 (44%), Gaps = 26/178 (14%)
Query: 32 IGEGAHAKV---YEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
IG GA V Y+ + + VAIK K P + R RE+ ++ V H+N++
Sbjct: 32 IGSGAQGIVVAAYDAILE-RNVAIK---KLSRPFQNQTHAKRAYRELVLMKVVNHKNIIG 87
Query: 89 FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR----------AM 138
+ + T S + + M ++ I LD R +
Sbjct: 88 LLN--------VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGI 139
Query: 139 ECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+ LHS GIIHRDLKP N+++ D T+K+ DFGLAR + MMT T + APE+
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSD-ATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 111/254 (43%), Gaps = 43/254 (16%)
Query: 32 IGEGAHAKVYEGKYKNQT------VAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G GA VY+G + + VAIK + + +P+ A KE E +++ V + +
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKE--ILDEAYVMASVDNPH 80
Query: 86 LVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
+ + +G C + ++T+L+ G L Y+ + + + + + IA+ M L
Sbjct: 81 VCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR 139
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEM-MTAETGTY--RWMAPE-LYSTVT 201
++HRDL N+L+ + +K+ DFGLA+ E AE G +WMA E + +
Sbjct: 140 LVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 198
Query: 202 LRQGEKKHYNH---------------------KNVRPSAENVPE------ELSIILTSCW 234
Q + Y ++ E +P+ ++ +I+ CW
Sbjct: 199 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCW 258
Query: 235 KEDPNARPNFTQII 248
D ++RP F ++I
Sbjct: 259 MIDADSRPKFRELI 272
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 111/254 (43%), Gaps = 43/254 (16%)
Query: 32 IGEGAHAKVYEGKYKNQT------VAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G GA VY+G + + VAIK + + +P+ A KE E +++ V + +
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKE--ILDEAYVMASVDNPH 78
Query: 86 LVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
+ + +G C + ++T+L+ G L Y+ + + + + + IA+ M L
Sbjct: 79 VCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEM-MTAETGTY--RWMAPE-LYSTVT 201
++HRDL N+L+ + +K+ DFGLA+ E AE G +WMA E + +
Sbjct: 138 LVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196
Query: 202 LRQGEKKHYNH---------------------KNVRPSAENVPE------ELSIILTSCW 234
Q + Y ++ E +P+ ++ +I+ CW
Sbjct: 197 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCW 256
Query: 235 KEDPNARPNFTQII 248
D ++RP F ++I
Sbjct: 257 MIDADSRPKFRELI 270
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 111/254 (43%), Gaps = 43/254 (16%)
Query: 32 IGEGAHAKVYEGKYKNQT------VAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G GA VY+G + + VAIK + + +P+ A KE E +++ V + +
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKE--ILDEAYVMASVDNPH 81
Query: 86 LVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
+ + +G C + ++T+L+ G L Y+ + + + + + IA+ M L
Sbjct: 82 VCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR 140
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEM-MTAETGTY--RWMAPE-LYSTVT 201
++HRDL N+L+ + +K+ DFGLA+ E AE G +WMA E + +
Sbjct: 141 LVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 199
Query: 202 LRQGEKKHYNH---------------------KNVRPSAENVPE------ELSIILTSCW 234
Q + Y ++ E +P+ ++ +I+ CW
Sbjct: 200 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCW 259
Query: 235 KEDPNARPNFTQII 248
D ++RP F ++I
Sbjct: 260 MIDADSRPKFRELI 273
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 111/254 (43%), Gaps = 43/254 (16%)
Query: 32 IGEGAHAKVYEGKYKNQT------VAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G GA VY+G + + VAIK + + +P+ A KE E +++ V + +
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKE--ILDEAYVMASVDNPH 81
Query: 86 LVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
+ + +G C + ++T+L+ G L Y+ + + + + + IA+ M L
Sbjct: 82 VCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR 140
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEM-MTAETGTY--RWMAPE-LYSTVT 201
++HRDL N+L+ + +K+ DFGLA+ E AE G +WMA E + +
Sbjct: 141 LVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 199
Query: 202 LRQGEKKHYNH---------------------KNVRPSAENVPE------ELSIILTSCW 234
Q + Y ++ E +P+ ++ +I+ CW
Sbjct: 200 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCW 259
Query: 235 KEDPNARPNFTQII 248
D ++RP F ++I
Sbjct: 260 MIDADSRPKFRELI 273
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 80/178 (44%), Gaps = 26/178 (14%)
Query: 32 IGEGAHAKV---YEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
IG GA V Y+ + + VAIK K P + R RE+ ++ V H+N++
Sbjct: 32 IGSGAQGIVCAAYDAILE-RNVAIK---KLSRPFQNQTHAKRAYRELVLMKVVNHKNIIG 87
Query: 89 FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR----------AM 138
+ + T S + + M ++ I LD R +
Sbjct: 88 LLN--------VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGI 139
Query: 139 ECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+ LHS GIIHRDLKP N+++ D T+K+ DFGLAR + MMT T + APE+
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSD-ATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 80/178 (44%), Gaps = 26/178 (14%)
Query: 32 IGEGAHAKV---YEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
IG GA V Y+ + + VAIK K P + R RE+ ++ V H+N++
Sbjct: 32 IGSGAQGIVCAAYDAILE-RNVAIK---KLSRPFQNQTHAKRAYRELVLMKVVNHKNIIG 87
Query: 89 FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR----------AM 138
+ + T S + + M ++ I LD R +
Sbjct: 88 LLN--------VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGI 139
Query: 139 ECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+ LHS GIIHRDLKP N+++ D T+K+ DFGLAR + MMT T + APE+
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSD-ATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 21/176 (11%)
Query: 32 IGEGAHAKVYEGKY--KNQTVAIKIVHKGETPEEIAKKESRFA-REVAMLSRVQHRNLVK 88
IG G+ VY+ K + VAIK V ++ RF RE+ ++ ++ H N+V+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKV----------LQDKRFKNRELQIMRKLDHCNIVR 77
Query: 89 F------IGACKEPVMV-IVTELLSGGTLRKYLLNMRPR-CLDVCVAIGFALDIARAMEC 140
G K+ V + +V + + R R + L V + + R++
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 141 LHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+HS GI HRD+KP+NLLL D +KL DFG A++ E + + + APEL
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 193
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 119/288 (41%), Gaps = 25/288 (8%)
Query: 25 HLFVGPRIGEGAHAKVYE--GKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQ 82
H + +G GA V+ + A K V TP E K+ R +E+ +S ++
Sbjct: 52 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVM---TPHESDKETVR--KEIQTMSVLR 106
Query: 83 HRNLVKFIGACKEP-VMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECL 141
H LV A ++ MV++ E +SGG L + + + + + A+ + + + + +
Sbjct: 107 HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK-MSEDEAVEYMRQVCKGLCHM 165
Query: 142 HSHGIIHRDLKPENLLLTEDLKT-IKLADFGLAREESLTEMMTAETGTYRWMAPEL---- 196
H + +H DLKPEN++ T +KL DFGL + + TGT + APE+
Sbjct: 166 HENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGK 225
Query: 197 ---YSTVTLRQGEKKHYNHKNVRP-SAENVPEELSIILTSCWKEDPNARPNFTQIIQMLL 252
Y T G + + P EN E L + + W D +A ++ + +
Sbjct: 226 PVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFI 285
Query: 253 NYLSAIAPPEPMIPHRIFNSENTILPPESPG------TSSLMTVRDDI 294
L P M H+ + P +PG +S +RD I
Sbjct: 286 RKLLLADPNTRMTIHQAL-EHPWLTPGNAPGRDSQIPSSRYTKIRDSI 332
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 21/176 (11%)
Query: 32 IGEGAHAKVYEGKY--KNQTVAIKIVHKGETPEEIAKKESRFA-REVAMLSRVQHRNLVK 88
IG G+ VY+ K + VAIK V ++ RF RE+ ++ ++ H N+V+
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKKV----------LQDKRFKNRELQIMRKLDHCNIVR 85
Query: 89 F------IGACKEPVMV-IVTELLSGGTLRKYLLNMRPR-CLDVCVAIGFALDIARAMEC 140
G K+ V + +V + + R R + L V + + R++
Sbjct: 86 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 145
Query: 141 LHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+HS GI HRD+KP+NLLL D +KL DFG A++ E + + + APEL
Sbjct: 146 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 201
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 21/176 (11%)
Query: 32 IGEGAHAKVYEGKY--KNQTVAIKIVHKGETPEEIAKKESRFA-REVAMLSRVQHRNLVK 88
IG G+ VY+ K + VAIK V ++ RF RE+ ++ ++ H N+V+
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKV----------LQDKRFKNRELQIMRKLDHCNIVR 96
Query: 89 F------IGACKEPVMV-IVTELLSGGTLRKYLLNMRPR-CLDVCVAIGFALDIARAMEC 140
G K+ V + +V + + R R + L V + + R++
Sbjct: 97 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 156
Query: 141 LHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+HS GI HRD+KP+NLLL D +KL DFG A++ E + + + APEL
Sbjct: 157 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 212
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 74 EVAMLSRVQHRNLVKFIGACKEPV-MVIVTELLSGGTLRKYLLNM--------RPRCLDV 124
E +L++V R +V A + + +V +++GG +R ++ N+ PR
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPR---- 290
Query: 125 CVAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMT- 183
AI + I +E LH II+RDLKPEN+LL +D ++++D GLA E + T
Sbjct: 291 --AIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDD-GNVRISDLGLAVELKAGQTKTK 347
Query: 184 AETGTYRWMAPEL 196
GT +MAPEL
Sbjct: 348 GYAGTPGFMAPEL 360
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 21/176 (11%)
Query: 32 IGEGAHAKVYEGKY--KNQTVAIKIVHKGETPEEIAKKESRFA-REVAMLSRVQHRNLVK 88
IG G+ VY+ K + VAIK V ++ RF RE+ ++ ++ H N+V+
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKV----------LQDKRFKNRELQIMRKLDHCNIVR 78
Query: 89 F------IGACKEPVMV-IVTELLSGGTLRKYLLNMRPR-CLDVCVAIGFALDIARAMEC 140
G K+ V + +V + + R R + L V + + R++
Sbjct: 79 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 138
Query: 141 LHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+HS GI HRD+KP+NLLL D +KL DFG A++ E + + + APEL
Sbjct: 139 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 194
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 21/176 (11%)
Query: 32 IGEGAHAKVYEGKY--KNQTVAIKIVHKGETPEEIAKKESRFA-REVAMLSRVQHRNLVK 88
IG G+ VY+ K + VAIK V ++ RF RE+ ++ ++ H N+V+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKV----------LQDKRFKNRELQIMRKLDHCNIVR 77
Query: 89 F------IGACKEPVMV-IVTELLSGGTLRKYLLNMRPR-CLDVCVAIGFALDIARAMEC 140
G K+ V + +V + + R R + L V + + R++
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 141 LHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+HS GI HRD+KP+NLLL D +KL DFG A++ E + + + APEL
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 193
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 119/288 (41%), Gaps = 25/288 (8%)
Query: 25 HLFVGPRIGEGAHAKVYE--GKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQ 82
H + +G GA V+ + A K V TP E K+ R +E+ +S ++
Sbjct: 158 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVM---TPHESDKETVR--KEIQTMSVLR 212
Query: 83 HRNLVKFIGACKEP-VMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECL 141
H LV A ++ MV++ E +SGG L + + + + + A+ + + + + +
Sbjct: 213 HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK-MSEDEAVEYMRQVCKGLCHM 271
Query: 142 HSHGIIHRDLKPENLLLTEDLKT-IKLADFGLAREESLTEMMTAETGTYRWMAPEL---- 196
H + +H DLKPEN++ T +KL DFGL + + TGT + APE+
Sbjct: 272 HENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGK 331
Query: 197 ---YSTVTLRQGEKKHYNHKNVRP-SAENVPEELSIILTSCWKEDPNARPNFTQIIQMLL 252
Y T G + + P EN E L + + W D +A ++ + +
Sbjct: 332 PVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFI 391
Query: 253 NYLSAIAPPEPMIPHRIFNSENTILPPESPG------TSSLMTVRDDI 294
L P M H+ + P +PG +S +RD I
Sbjct: 392 RKLLLADPNTRMTIHQAL-EHPWLTPGNAPGRDSQIPSSRYTKIRDSI 438
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 82/178 (46%), Gaps = 25/178 (14%)
Query: 32 IGEGAHAKVYEGKY--KNQTVAIKIVHKGETPEEIAKKESRFA-REVAMLSRVQHRNLVK 88
IG G+ VY+ K + VAIK V ++ RF RE+ ++ ++ H N+V+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKV----------LQDKRFKNRELQIMRKLDHCNIVR 77
Query: 89 ---FIGACKEPVMVIVTELLSG-------GTLRKYLLNMRPRCLDVCVAIGFALDIARAM 138
F + E V+ L+ R Y + + L V + + R++
Sbjct: 78 LRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHY--SRAKQTLPVIYVKLYMYQLFRSL 135
Query: 139 ECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+HS GI HRD+KP+NLLL D +KL DFG A++ E + + + APEL
Sbjct: 136 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 193
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 74 EVAMLSRVQHRNLVKFIGACKEPV-MVIVTELLSGGTLRKYLLNM--------RPRCLDV 124
E +L++V R +V A + + +V +++GG +R ++ N+ PR
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPR---- 290
Query: 125 CVAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMT- 183
AI + I +E LH II+RDLKPEN+LL +D ++++D GLA E + T
Sbjct: 291 --AIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDD-GNVRISDLGLAVELKAGQTKTK 347
Query: 184 AETGTYRWMAPEL 196
GT +MAPEL
Sbjct: 348 GYAGTPGFMAPEL 360
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 21/176 (11%)
Query: 32 IGEGAHAKVYEGKY--KNQTVAIKIVHKGETPEEIAKKESRFA-REVAMLSRVQHRNLVK 88
IG G+ VY+ K + VAIK V ++ RF RE+ ++ ++ H N+V+
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKV----------LQDKRFKNRELQIMRKLDHCNIVR 89
Query: 89 F------IGACKEPVMV-IVTELLSGGTLRKYLLNMRPR-CLDVCVAIGFALDIARAMEC 140
G K+ V + +V + + R R + L V + + R++
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 149
Query: 141 LHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+HS GI HRD+KP+NLLL D +KL DFG A++ E + + + APEL
Sbjct: 150 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 205
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 74 EVAMLSRVQHRNLVKFIGACKEPV-MVIVTELLSGGTLRKYLLNM--------RPRCLDV 124
E +L++V R +V A + + +V +++GG +R ++ N+ PR
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPR---- 290
Query: 125 CVAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMT- 183
AI + I +E LH II+RDLKPEN+LL +D ++++D GLA E + T
Sbjct: 291 --AIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDD-GNVRISDLGLAVELKAGQTKTK 347
Query: 184 AETGTYRWMAPEL 196
GT +MAPEL
Sbjct: 348 GYAGTPGFMAPEL 360
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 111/254 (43%), Gaps = 43/254 (16%)
Query: 32 IGEGAHAKVYEGKYKNQT------VAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G GA VY+G + + VAIK + + +P+ A KE E +++ V + +
Sbjct: 33 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKE--ILDEAYVMASVDNPH 88
Query: 86 LVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
+ + +G C + ++T+L+ G L Y+ + + + + + IA+ M L
Sbjct: 89 VCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR 147
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEM-MTAETGTY--RWMAPE-LYSTVT 201
++HRDL N+L+ + +K+ DFGLA+ E AE G +WMA E + +
Sbjct: 148 LVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 206
Query: 202 LRQGEKKHYNH---------------------KNVRPSAENVPE------ELSIILTSCW 234
Q + Y ++ E +P+ ++ +I+ CW
Sbjct: 207 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCW 266
Query: 235 KEDPNARPNFTQII 248
D ++RP F ++I
Sbjct: 267 MIDADSRPKFRELI 280
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 74 EVAMLSRVQHRNLVKFIGACKEPV-MVIVTELLSGGTLRKYLLNM--------RPRCLDV 124
E +L++V R +V A + + +V +++GG +R ++ N+ PR
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPR---- 290
Query: 125 CVAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMT- 183
AI + I +E LH II+RDLKPEN+LL +D ++++D GLA E + T
Sbjct: 291 --AIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDD-GNVRISDLGLAVELKAGQTKTK 347
Query: 184 AETGTYRWMAPEL 196
GT +MAPEL
Sbjct: 348 GYAGTPGFMAPEL 360
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 111/254 (43%), Gaps = 43/254 (16%)
Query: 32 IGEGAHAKVYEGKYKNQT------VAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G GA VY+G + + VAIK + + +P+ A KE E +++ V + +
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKE--ILDEAYVMASVDNPH 81
Query: 86 LVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
+ + +G C + ++T+L+ G L Y+ + + + + + IA+ M L
Sbjct: 82 VCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR 140
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEM-MTAETGTY--RWMAPE-LYSTVT 201
++HRDL N+L+ + +K+ DFGLA+ E AE G +WMA E + +
Sbjct: 141 LVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 199
Query: 202 LRQGEKKHYNH---------------------KNVRPSAENVPE------ELSIILTSCW 234
Q + Y ++ E +P+ ++ +I+ CW
Sbjct: 200 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCW 259
Query: 235 KEDPNARPNFTQII 248
D ++RP F ++I
Sbjct: 260 MIDADSRPKFRELI 273
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 111/254 (43%), Gaps = 43/254 (16%)
Query: 32 IGEGAHAKVYEGKYKNQT------VAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G GA VY+G + + VAIK + + +P+ A KE E +++ V + +
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKE--ILDEAYVMASVDNPH 78
Query: 86 LVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
+ + +G C + ++T+L+ G L Y+ + + + + + IA+ M L
Sbjct: 79 VCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEM-MTAETGTY--RWMAPE-LYSTVT 201
++HRDL N+L+ + +K+ DFGLA+ E AE G +WMA E + +
Sbjct: 138 LVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196
Query: 202 LRQGEKKHYNH---------------------KNVRPSAENVPE------ELSIILTSCW 234
Q + Y ++ E +P+ ++ +I+ CW
Sbjct: 197 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCW 256
Query: 235 KEDPNARPNFTQII 248
D ++RP F ++I
Sbjct: 257 MIDADSRPKFRELI 270
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 101/224 (45%), Gaps = 49/224 (21%)
Query: 32 IGEGAHAKVYEGKYKNQTVAI---KIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
IG+G++ V +NQT AI KI++K + + K R EV ++ ++ H N+ +
Sbjct: 34 IGQGSYG-VVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIAR 92
Query: 89 FIGACK-EPVMVIVTELLSGG----TLRKYLLNMRPRC-LDVCV------------AI-- 128
+ E + +V EL GG L ++ + +C +DV AI
Sbjct: 93 LYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAING 152
Query: 129 ---GF--ALD--------------IARAMECLHSHGIIHRDLKPENLLLTEDLK-TIKLA 168
GF +LD I A+ LH+ GI HRD+KPEN L + + IKL
Sbjct: 153 SIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLV 212
Query: 169 DFGLARE-----ESLTEMMTAETGTYRWMAPELYSTVTLRQGEK 207
DFGL++E MT + GT ++APE+ +T G K
Sbjct: 213 DFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPK 256
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 21/176 (11%)
Query: 32 IGEGAHAKVYEGKY--KNQTVAIKIVHKGETPEEIAKKESRFA-REVAMLSRVQHRNLVK 88
IG G+ VY+ K + VAIK V ++ RF RE+ ++ ++ H N+V+
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKKV----------LQDKRFKNRELQIMRKLDHCNIVR 81
Query: 89 F------IGACKEPVMV-IVTELLSGGTLRKYLLNMRPR-CLDVCVAIGFALDIARAMEC 140
G K+ V + +V + + R R + L V + + R++
Sbjct: 82 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 141
Query: 141 LHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+HS GI HRD+KP+NLLL D +KL DFG A++ E + + + APEL
Sbjct: 142 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 197
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 21/176 (11%)
Query: 32 IGEGAHAKVYEGKY--KNQTVAIKIVHKGETPEEIAKKESRFA-REVAMLSRVQHRNLVK 88
IG G+ VY+ K + VAIK V ++ RF RE+ ++ ++ H N+V+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKV----------LQDKRFKNRELQIMRKLDHCNIVR 77
Query: 89 F------IGACKEPVMV-IVTELLSGGTLRKYLLNMRPR-CLDVCVAIGFALDIARAMEC 140
G K+ V + +V + + R R + L V + + R++
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 141 LHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+HS GI HRD+KP+NLLL D +KL DFG A++ E + + + APEL
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 193
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 21/176 (11%)
Query: 32 IGEGAHAKVYEGKY--KNQTVAIKIVHKGETPEEIAKKESRFA-REVAMLSRVQHRNLVK 88
IG G+ VY+ K + VAIK V ++ RF RE+ ++ ++ H N+V+
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKV----------LQDKRFKNRELQIMRKLDHCNIVR 90
Query: 89 F------IGACKEPVMV-IVTELLSGGTLRKYLLNMRPR-CLDVCVAIGFALDIARAMEC 140
G K+ V + +V + + R R + L V + + R++
Sbjct: 91 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 150
Query: 141 LHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+HS GI HRD+KP+NLLL D +KL DFG A++ E + + + APEL
Sbjct: 151 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 206
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 5/139 (3%)
Query: 61 PEEIAKKESRFAREVAMLSRVQHRNLVKFIGACKEPV-MVIVTELLSGGTLRKYLLNMRP 119
P+ + RF +E+ ++ + H N+++ ++ + +V EL +GG L + +++
Sbjct: 60 PKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVH--K 117
Query: 120 RCLDVCVAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDL--KTIKLADFGLAREES 177
R A D+ A+ H + HRDLKPEN L D +KL DFGLA
Sbjct: 118 RVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK 177
Query: 178 LTEMMTAETGTYRWMAPEL 196
+MM + GT +++P++
Sbjct: 178 PGKMMRTKVGTPYYVSPQV 196
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 80/178 (44%), Gaps = 26/178 (14%)
Query: 32 IGEGAHAKV---YEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
IG GA V Y+ + + VAIK K P + R RE+ ++ V H+N++
Sbjct: 32 IGSGAQGIVCAAYDAILE-RNVAIK---KLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 89 FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR------AMEC-- 140
+ + T S + + M ++ I LD R M C
Sbjct: 88 LLN--------VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGI 139
Query: 141 --LHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
LHS GIIHRDLKP N+++ D T+K+ DFGLAR + MMT T + APE+
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSD-ATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 21/176 (11%)
Query: 32 IGEGAHAKVYEGKY--KNQTVAIKIVHKGETPEEIAKKESRFA-REVAMLSRVQHRNLVK 88
IG G+ VY+ K + VAIK V + + RF RE+ ++ ++ H N+V+
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQ----------DKRFKNRELQIMRKLDHCNIVR 111
Query: 89 F------IGACKEPVMV-IVTELLSGGTLRKYLLNMRPR-CLDVCVAIGFALDIARAMEC 140
G K+ V + +V + + R R + L V + + R++
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 141 LHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+HS GI HRD+KP+NLLL D +KL DFG A++ E + + + APEL
Sbjct: 172 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 227
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 21/176 (11%)
Query: 32 IGEGAHAKVYEGKY--KNQTVAIKIVHKGETPEEIAKKESRFA-REVAMLSRVQHRNLVK 88
IG G+ VY+ K + VAIK V ++ RF RE+ ++ ++ H N+V+
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKV----------LQDKRFKNRELQIMRKLDHCNIVR 89
Query: 89 F------IGACKEPVMV-IVTELLSGGTLRKYLLNMRPR-CLDVCVAIGFALDIARAMEC 140
G K+ V + +V + + R R + L V + + R++
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 149
Query: 141 LHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+HS GI HRD+KP+NLLL D +KL DFG A++ E + + + APEL
Sbjct: 150 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 205
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 5/139 (3%)
Query: 61 PEEIAKKESRFAREVAMLSRVQHRNLVKFIGACKEPV-MVIVTELLSGGTLRKYLLNMRP 119
P+ + RF +E+ ++ + H N+++ ++ + +V EL +GG L + +++
Sbjct: 43 PKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVH--K 100
Query: 120 RCLDVCVAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDL--KTIKLADFGLAREES 177
R A D+ A+ H + HRDLKPEN L D +KL DFGLA
Sbjct: 101 RVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK 160
Query: 178 LTEMMTAETGTYRWMAPEL 196
+MM + GT +++P++
Sbjct: 161 PGKMMRTKVGTPYYVSPQV 179
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 110/254 (43%), Gaps = 43/254 (16%)
Query: 32 IGEGAHAKVYEGKYKNQT------VAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G GA VY+G + + VAIK + + +P+ A KE E +++ V + +
Sbjct: 20 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKE--ILDEAYVMASVDNPH 75
Query: 86 LVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
+ + +G C + ++T+L+ G L Y+ + + + + + IA M L
Sbjct: 76 VCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAEGMNYLEDRR 134
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEM-MTAETGTY--RWMAPE-LYSTVT 201
++HRDL N+L+ + +K+ DFGLA+ E AE G +WMA E + +
Sbjct: 135 LVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 193
Query: 202 LRQGEKKHYNH---------------------KNVRPSAENVPE------ELSIILTSCW 234
Q + Y ++ E +P+ ++ +I+ CW
Sbjct: 194 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCW 253
Query: 235 KEDPNARPNFTQII 248
D ++RP F ++I
Sbjct: 254 MIDADSRPKFRELI 267
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 80/178 (44%), Gaps = 26/178 (14%)
Query: 32 IGEGAHAKV---YEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
IG GA V Y+ + + VAIK K P + R RE+ ++ V H+N++
Sbjct: 32 IGSGAQGIVCAAYDAILE-RNVAIK---KLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 89 FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR------AMEC-- 140
+ + T S + + M ++ I LD R M C
Sbjct: 88 LLN--------VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGI 139
Query: 141 --LHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
LHS GIIHRDLKP N+++ D T+K+ DFGLAR + MMT T + APE+
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 109/250 (43%), Gaps = 35/250 (14%)
Query: 32 IGEGAHAKVYEGKYKNQTVAIKI-VHKGETPEEIAKKESR-FAREVAMLSRVQHRNLVKF 89
+G GA VY+G + + +KI V E E + K ++ E +++ V + ++ +
Sbjct: 57 LGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRL 116
Query: 90 IGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIHR 149
+G C + ++T+L+ G L Y+ + + + + + IA+ M L ++HR
Sbjct: 117 LGICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRRLVHR 175
Query: 150 DLKPENLLLTEDLKTIKLADFGLAREESLTEM-MTAETGTY--RWMAPE-LYSTVTLRQG 205
DL N+L+ + +K+ DFGLA+ E AE G +WMA E + + Q
Sbjct: 176 DLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 234
Query: 206 EKKHYNH---------------------KNVRPSAENVPE------ELSIILTSCWKEDP 238
+ Y ++ E +P+ ++ +I+ CW D
Sbjct: 235 DVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDA 294
Query: 239 NARPNFTQII 248
++RP F ++I
Sbjct: 295 DSRPKFRELI 304
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 21/176 (11%)
Query: 32 IGEGAHAKVYEGKY--KNQTVAIKIVHKGETPEEIAKKESRFA-REVAMLSRVQHRNLVK 88
IG G+ VY+ K + VAIK V + + RF RE+ ++ ++ H N+V+
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKKVLQ----------DKRFKNRELQIMRKLDHCNIVR 113
Query: 89 F------IGACKEPVMV-IVTELLSGGTLRKYLLNMRPR-CLDVCVAIGFALDIARAMEC 140
G K+ V + +V + + R R + L V + + R++
Sbjct: 114 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 173
Query: 141 LHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+HS GI HRD+KP+NLLL D +KL DFG A++ E + + + APEL
Sbjct: 174 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 229
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 21/176 (11%)
Query: 32 IGEGAHAKVYEGKY--KNQTVAIKIVHKGETPEEIAKKESRFA-REVAMLSRVQHRNLVK 88
IG G+ VY+ K + VAIK V + + RF RE+ ++ ++ H N+V+
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKKVLQ----------DKRFKNRELQIMRKLDHCNIVR 105
Query: 89 F------IGACKEPVMV-IVTELLSGGTLRKYLLNMRPR-CLDVCVAIGFALDIARAMEC 140
G K+ V + +V + + R R + L V + + R++
Sbjct: 106 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 165
Query: 141 LHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+HS GI HRD+KP+NLLL D +KL DFG A++ E + + + APEL
Sbjct: 166 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 221
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 21/176 (11%)
Query: 32 IGEGAHAKVYEGKY--KNQTVAIKIVHKGETPEEIAKKESRFA-REVAMLSRVQHRNLVK 88
IG G+ VY+ K + VAIK V ++ RF RE+ ++ ++ H N+V+
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKV----------LQDKRFKNRELQIMRKLDHCNIVR 82
Query: 89 F------IGACKEPVMV-IVTELLSGGTLRKYLLNMRPR-CLDVCVAIGFALDIARAMEC 140
G K+ V + +V + + R R + L V + + R++
Sbjct: 83 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 142
Query: 141 LHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+HS GI HRD+KP+NLLL D +KL DFG A++ E + + + APEL
Sbjct: 143 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 198
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 21/176 (11%)
Query: 32 IGEGAHAKVYEGKY--KNQTVAIKIVHKGETPEEIAKKESRFA-REVAMLSRVQHRNLVK 88
IG G+ VY+ K + VAIK V + + RF RE+ ++ ++ H N+V+
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKVLQ----------DKRFKNRELQIMRKLDHCNIVR 115
Query: 89 F------IGACKEPVMV-IVTELLSGGTLRKYLLNMRPR-CLDVCVAIGFALDIARAMEC 140
G K+ V + +V + + R R + L V + + R++
Sbjct: 116 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 175
Query: 141 LHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+HS GI HRD+KP+NLLL D +KL DFG A++ E + + + APEL
Sbjct: 176 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 231
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 89/190 (46%), Gaps = 27/190 (14%)
Query: 20 LIDPKHLFVGPRIGEGAHAKVYE--GKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAM 77
D LF +G+GA + V K Q A KI++ T + A+ + RE +
Sbjct: 29 FTDDYQLF--EELGKGAFSVVRRCVKKTPTQEYAAKIIN---TKKLSARDHQKLEREARI 83
Query: 78 LSRVQHRNLVKFIGA-CKEPVMVIVTELLSGGTL------RKYLLNMRP-RCLDVCVAIG 129
++H N+V+ + +E +V +L++GG L R+Y C+
Sbjct: 84 CRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIH------ 137
Query: 130 FALDIARAMECLHSHGIIHRDLKPENLLLTEDLK--TIKLADFGLARE-ESLTEMMTAET 186
I ++ +H H I+HRDLKPENLLL K +KLADFGLA E + +
Sbjct: 138 ---QILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFA 194
Query: 187 GTYRWMAPEL 196
GT +++PE+
Sbjct: 195 GTPGYLSPEV 204
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 89/185 (48%), Gaps = 32/185 (17%)
Query: 32 IGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRV--QHRNLVKF 89
IG+G +V+ GK++ + VA+KI +++E + RE + V +H N++ F
Sbjct: 50 IGKGRFGEVWRGKWRGEEVAVKIFS--------SREERSWFREAEIYQTVMLRHENILGF 101
Query: 90 IGACKE-----PVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
I A + + +V++ G+L YL + V I AL A + LH
Sbjct: 102 IAADNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHME 158
Query: 145 --------GIIHRDLKPENLLLTEDLKTIKLADFGLA-REESLTEMM----TAETGTYRW 191
I HRDLK +N+L+ ++ T +AD GLA R +S T+ + GT R+
Sbjct: 159 IVGTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 217
Query: 192 MAPEL 196
MAPE+
Sbjct: 218 MAPEV 222
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 21/176 (11%)
Query: 32 IGEGAHAKVYEGKY--KNQTVAIKIVHKGETPEEIAKKESRFA-REVAMLSRVQHRNLVK 88
IG G+ VY+ K + VAIK V + + RF RE+ ++ ++ H N+V+
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQ----------DKRFKNRELQIMRKLDHCNIVR 111
Query: 89 F------IGACKEPVMV-IVTELLSGGTLRKYLLNMRPR-CLDVCVAIGFALDIARAMEC 140
G K+ V + +V + + R R + L V + + R++
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 141 LHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+HS GI HRD+KP+NLLL D +KL DFG A++ E + + + APEL
Sbjct: 172 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 227
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 87/178 (48%), Gaps = 13/178 (7%)
Query: 28 VGPRIGEGAHAKVYEGKYKNQTV--AIKIVHKGETPEE---IAKKESRFAREVAMLSRVQ 82
+G +G G A V + + K+ + A K + K ++ + ++E REV++L +V
Sbjct: 16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREE--IEREVSILRQVL 73
Query: 83 HRNLVKFIGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECL 141
H N++ + +V++ EL+SGG L +L + L A F I + L
Sbjct: 74 HPNIITLHDVYENRTDVVLILELVSGGELFDFL--AQKESLSEEEATSFIKQILDGVNYL 131
Query: 142 HSHGIIHRDLKPENLLLTED---LKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
H+ I H DLKPEN++L + + IKL DFGLA E GT ++APE+
Sbjct: 132 HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEI 189
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 89/185 (48%), Gaps = 32/185 (17%)
Query: 32 IGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRV--QHRNLVKF 89
IG+G +V+ GK++ + VA+KI +++E + RE + V +H N++ F
Sbjct: 37 IGKGRFGEVWRGKWRGEEVAVKIFS--------SREERSWFREAEIYQTVMLRHENILGF 88
Query: 90 IGACKE-----PVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
I A + + +V++ G+L YL + V I AL A + LH
Sbjct: 89 IAADNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHME 145
Query: 145 --------GIIHRDLKPENLLLTEDLKTIKLADFGLA-REESLTEMM----TAETGTYRW 191
I HRDLK +N+L+ ++ T +AD GLA R +S T+ + GT R+
Sbjct: 146 IVGTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 204
Query: 192 MAPEL 196
MAPE+
Sbjct: 205 MAPEV 209
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 21/176 (11%)
Query: 32 IGEGAHAKVYEGKY--KNQTVAIKIVHKGETPEEIAKKESRFA-REVAMLSRVQHRNLVK 88
IG G+ VY+ K + VAIK V ++ RF RE+ ++ ++ H N+V+
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKV----------LQDKRFKNRELQIMRKLDHCNIVR 156
Query: 89 F------IGACKEPVMV-IVTELLSGGTLRKYLLNMRPR-CLDVCVAIGFALDIARAMEC 140
G K+ V + +V + + R R + L V + + R++
Sbjct: 157 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 216
Query: 141 LHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
+HS GI HRD+KP+NLLL D +KL DFG A++ E + + + APEL
Sbjct: 217 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 272
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 89/185 (48%), Gaps = 32/185 (17%)
Query: 32 IGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRV--QHRNLVKF 89
IG+G +V+ GK++ + VA+KI +++E + RE + V +H N++ F
Sbjct: 12 IGKGRFGEVWRGKWRGEEVAVKIFS--------SREERSWFREAEIYQTVMLRHENILGF 63
Query: 90 IGACKE-----PVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
I A + + +V++ G+L YL + V I AL A + LH
Sbjct: 64 IAADNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHME 120
Query: 145 --------GIIHRDLKPENLLLTEDLKTIKLADFGLA-REESLTEMM----TAETGTYRW 191
I HRDLK +N+L+ ++ T +AD GLA R +S T+ + GT R+
Sbjct: 121 IVGTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 179
Query: 192 MAPEL 196
MAPE+
Sbjct: 180 MAPEV 184
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 89/185 (48%), Gaps = 32/185 (17%)
Query: 32 IGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRV--QHRNLVKF 89
IG+G +V+ GK++ + VA+KI +++E + RE + V +H N++ F
Sbjct: 11 IGKGRFGEVWRGKWRGEEVAVKIFS--------SREERSWFREAEIYQTVMLRHENILGF 62
Query: 90 IGACKE-----PVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
I A + + +V++ G+L YL + V I AL A + LH
Sbjct: 63 IAADNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHME 119
Query: 145 --------GIIHRDLKPENLLLTEDLKTIKLADFGLA-REESLTEMM----TAETGTYRW 191
I HRDLK +N+L+ ++ T +AD GLA R +S T+ + GT R+
Sbjct: 120 IVGTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 178
Query: 192 MAPEL 196
MAPE+
Sbjct: 179 MAPEV 183
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 89/185 (48%), Gaps = 32/185 (17%)
Query: 32 IGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRV--QHRNLVKF 89
IG+G +V+ GK++ + VA+KI +++E + RE + V +H N++ F
Sbjct: 14 IGKGRFGEVWRGKWRGEEVAVKIFS--------SREERSWFREAEIYQTVMLRHENILGF 65
Query: 90 IGACKE-----PVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
I A + + +V++ G+L YL + V I AL A + LH
Sbjct: 66 IAADNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHME 122
Query: 145 --------GIIHRDLKPENLLLTEDLKTIKLADFGLA-REESLTEMM----TAETGTYRW 191
I HRDLK +N+L+ ++ T +AD GLA R +S T+ + GT R+
Sbjct: 123 IVGTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 181
Query: 192 MAPEL 196
MAPE+
Sbjct: 182 MAPEV 186
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 89/185 (48%), Gaps = 32/185 (17%)
Query: 32 IGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRV--QHRNLVKF 89
IG+G +V+ GK++ + VA+KI +++E + RE + V +H N++ F
Sbjct: 17 IGKGRFGEVWRGKWRGEEVAVKIFS--------SREERSWFREAEIYQTVMLRHENILGF 68
Query: 90 IGACKE-----PVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
I A + + +V++ G+L YL + V I AL A + LH
Sbjct: 69 IAADNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHME 125
Query: 145 --------GIIHRDLKPENLLLTEDLKTIKLADFGLA-REESLTEMM----TAETGTYRW 191
I HRDLK +N+L+ ++ T +AD GLA R +S T+ + GT R+
Sbjct: 126 IVGTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 184
Query: 192 MAPEL 196
MAPE+
Sbjct: 185 MAPEV 189
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Query: 98 MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIHRDLKPENLL 157
++I+ E + GG L + + A DI A++ LHSH I HRD+KPENLL
Sbjct: 82 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLL 141
Query: 158 LTEDLK--TIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
T K +KL DFG A+E + + T Y ++APE+
Sbjct: 142 YTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPY-YVAPEV 181
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Query: 98 MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIHRDLKPENLL 157
++I+ E + GG L + + A DI A++ LHSH I HRD+KPENLL
Sbjct: 101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLL 160
Query: 158 LTEDLK--TIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
T K +KL DFG A+E + + T Y ++APE+
Sbjct: 161 YTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPY-YVAPEV 200
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 82/183 (44%), Gaps = 27/183 (14%)
Query: 27 FVGP-RIGEGAHAKVYEG--KYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQH 83
+V P +G GA+ V K + VAIK + + E AK R RE+ +L +QH
Sbjct: 26 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAK---RAYRELLLLKHMQH 82
Query: 84 RNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFAL----------D 133
N++ + + T S + L M D+ +G
Sbjct: 83 ENVIGLLD--------VFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQ 134
Query: 134 IARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMA 193
+ + ++ +HS G++HRDLKP NL + ED + +K+ DFGLAR MT T + A
Sbjct: 135 MLKGLKYIHSAGVVHRDLKPGNLAVNEDCE-LKILDFGLARHADAE--MTGYVVTRWYRA 191
Query: 194 PEL 196
PE+
Sbjct: 192 PEV 194
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 101/235 (42%), Gaps = 39/235 (16%)
Query: 32 IGEGAH--AKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
IG G A++ K + VA+K + +G A + RE+ ++H N+V+F
Sbjct: 28 IGSGNFGVARLMRDKLTKELVAVKYIERG------AAIDENVQREIINHRSLRHPNIVRF 81
Query: 90 IGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR--------AMEC 140
P + I+ E SGG L + +C A F+ D AR +
Sbjct: 82 KEVILTPTHLAIIMEYASGGELYER----------ICNAGRFSEDEARFFFQQLLSGVSY 131
Query: 141 LHSHGIIHRDLKPENLLLTED-LKTIKLADFGLAREESLTEMMTAETGTYRWMAPELYST 199
HS I HRDLK EN LL +K+ DFG ++ L + GT ++APE
Sbjct: 132 CHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPE---- 187
Query: 200 VTLRQGEKKHYNHKNVRPSAENVPEELSIILTSCWK-EDPNARPNFTQIIQMLLN 253
V LRQ Y+ K + V L ++L + EDP ++ + IQ +L+
Sbjct: 188 VLLRQ----EYDGKIADVWSCGV--TLYVMLVGAYPFEDPEEPRDYRKTIQRILS 236
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 85/169 (50%), Gaps = 8/169 (4%)
Query: 32 IGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+G+G+ KV + K A+K++ K ++ + + + + L+R H L +
Sbjct: 31 LGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLAR-NHPFLTQL 89
Query: 90 IGACKEP-VMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
+ P + V E ++GG L ++ + R D A +A +I A+ LH GII+
Sbjct: 90 FCCFQTPDRLFFVMEFVNGGDLMFHI--QKSRRFDEARARFYAAEIISALMFLHDKGIIY 147
Query: 149 RDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAE-TGTYRWMAPEL 196
RDLK +N+LL + KLADFG+ +E + TA GT ++APE+
Sbjct: 148 RDLKLDNVLLDHE-GHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEI 195
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 110/254 (43%), Gaps = 43/254 (16%)
Query: 32 IGEGAHAKVYEGKYKNQT------VAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G GA VY+G + + VAIK + + +P+ A KE E +++ V + +
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKE--ILDEAYVMASVDNPH 79
Query: 86 LVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
+ + +G C + ++ +L+ G L Y+ + + + + + IA+ M L
Sbjct: 80 VCRLLGICLTSTVQLIMQLMPFGXLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR 138
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEM-MTAETGTY--RWMAPE-LYSTVT 201
++HRDL N+L+ + +K+ DFGLA+ E AE G +WMA E + +
Sbjct: 139 LVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 197
Query: 202 LRQGEKKHYNH---------------------KNVRPSAENVPE------ELSIILTSCW 234
Q + Y ++ E +P+ ++ +I+ CW
Sbjct: 198 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCW 257
Query: 235 KEDPNARPNFTQII 248
D ++RP F ++I
Sbjct: 258 MIDADSRPKFRELI 271
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 110/254 (43%), Gaps = 43/254 (16%)
Query: 32 IGEGAHAKVYEGKYKNQT------VAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G GA VY+G + + VAIK + + +P+ A KE E +++ V + +
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKE--ILDEAYVMASVDNPH 78
Query: 86 LVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
+ + +G C + ++ +L+ G L Y+ + + + + + IA+ M L
Sbjct: 79 VCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEM-MTAETGTY--RWMAPE-LYSTVT 201
++HRDL N+L+ + +K+ DFGLA+ E AE G +WMA E + +
Sbjct: 138 LVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196
Query: 202 LRQGEKKHYNH---------------------KNVRPSAENVPE------ELSIILTSCW 234
Q + Y ++ E +P+ ++ +I+ CW
Sbjct: 197 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCW 256
Query: 235 KEDPNARPNFTQII 248
D ++RP F ++I
Sbjct: 257 MIDADSRPKFRELI 270
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 83/175 (47%), Gaps = 35/175 (20%)
Query: 44 KYKNQTVAIKIVHKGE-TPEEIAKKESRFAREVAMLSRV-QHRNLVKFIGACKEPVMV-I 100
K N A+KI+ K + P E E+ +L R QH N++ + V +
Sbjct: 44 KATNMEFAVKIIDKSKRDPTE----------EIEILLRYGQHPNIITLKDVYDDGKYVYV 93
Query: 101 VTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIHRDLKPENLLLTE 160
VTEL+ GG L +L R + A I + +E LH+ G++HRDLKP N+L +
Sbjct: 94 VTELMKGGELLDKIL--RQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVD 151
Query: 161 DL---KTIKLADFGLAREESLTEMMTAETG-------TYRWMAPELYSTVTLRQG 205
+ ++I++ DFG A++ + AE G T ++APE V RQG
Sbjct: 152 ESGNPESIRICDFGFAKQ------LRAENGLLMTPCYTANFVAPE----VLERQG 196
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 110/254 (43%), Gaps = 43/254 (16%)
Query: 32 IGEGAHAKVYEGKYKNQT------VAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G GA VY+G + + VAIK + + +P+ A KE E +++ V + +
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKE--ILDEAYVMASVDNPH 82
Query: 86 LVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
+ + +G C + ++ +L+ G L Y+ + + + + + IA+ M L
Sbjct: 83 VCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR 141
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEM-MTAETGTY--RWMAPE-LYSTVT 201
++HRDL N+L+ + +K+ DFGLA+ E AE G +WMA E + +
Sbjct: 142 LVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 200
Query: 202 LRQGEKKHYNH---------------------KNVRPSAENVPE------ELSIILTSCW 234
Q + Y ++ E +P+ ++ +I+ CW
Sbjct: 201 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCW 260
Query: 235 KEDPNARPNFTQII 248
D ++RP F ++I
Sbjct: 261 MIDADSRPKFRELI 274
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 92/191 (48%), Gaps = 26/191 (13%)
Query: 23 PKHLF----VGPRIGEGAHAKVYEGK--YKNQTVAIKIVHKGETPEEIAKKES---RFAR 73
P HL +G +G G ++V+ + ++ VA+K++ ++A+ S RF R
Sbjct: 7 PSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRA-----DLARDPSFYLRFRR 61
Query: 74 EVAMLSRVQHRNLVKFIGACKE-----PVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAI 128
E + + H +V + P+ IV E + G TLR + P + AI
Sbjct: 62 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAI 119
Query: 129 GFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAET-- 186
D +A+ H +GIIHRD+KP N+L++ +K+ DFG+AR + + +T
Sbjct: 120 EVIADACQALNFSHQNGIIHRDVKPANILISA-TNAVKVVDFGIARAIADSGNSVXQTAA 178
Query: 187 --GTYRWMAPE 195
GT ++++PE
Sbjct: 179 VIGTAQYLSPE 189
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 110/254 (43%), Gaps = 43/254 (16%)
Query: 32 IGEGAHAKVYEGKYKNQT------VAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G GA VY+G + + VAIK + + +P+ A KE E +++ V + +
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKE--ILDEAYVMASVDNPH 81
Query: 86 LVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
+ + +G C + ++ +L+ G L Y+ + + + + + IA+ M L
Sbjct: 82 VCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR 140
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEM-MTAETGTY--RWMAPE-LYSTVT 201
++HRDL N+L+ + +K+ DFGLA+ E AE G +WMA E + +
Sbjct: 141 LVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 199
Query: 202 LRQGEKKHYNH---------------------KNVRPSAENVPE------ELSIILTSCW 234
Q + Y ++ E +P+ ++ +I+ CW
Sbjct: 200 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCW 259
Query: 235 KEDPNARPNFTQII 248
D ++RP F ++I
Sbjct: 260 MIDADSRPKFRELI 273
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 82/183 (44%), Gaps = 27/183 (14%)
Query: 27 FVGP-RIGEGAHAKVYEG--KYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQH 83
+V P +G GA+ V K + VAIK + + E AK R RE+ +L +QH
Sbjct: 44 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAK---RAYRELLLLKHMQH 100
Query: 84 RNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFAL----------D 133
N++ + + T S + L M D+ +G
Sbjct: 101 ENVIGLLD--------VFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQ 152
Query: 134 IARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMA 193
+ + ++ +HS G++HRDLKP NL + ED + +K+ DFGLAR MT T + A
Sbjct: 153 MLKGLKYIHSAGVVHRDLKPGNLAVNEDCE-LKILDFGLARHADAE--MTGYVVTRWYRA 209
Query: 194 PEL 196
PE+
Sbjct: 210 PEV 212
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 110/254 (43%), Gaps = 43/254 (16%)
Query: 32 IGEGAHAKVYEGKYKNQT------VAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G GA VY+G + + VAIK + + +P+ A KE E +++ V + +
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKE--ILDEAYVMASVDNPH 79
Query: 86 LVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
+ + +G C + ++ +L+ G L Y+ + + + + + IA+ M L
Sbjct: 80 VCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR 138
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEM-MTAETGTY--RWMAPE-LYSTVT 201
++HRDL N+L+ + +K+ DFGLA+ E AE G +WMA E + +
Sbjct: 139 LVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 197
Query: 202 LRQGEKKHYNH---------------------KNVRPSAENVPE------ELSIILTSCW 234
Q + Y ++ E +P+ ++ +I+ CW
Sbjct: 198 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCW 257
Query: 235 KEDPNARPNFTQII 248
D ++RP F ++I
Sbjct: 258 MIDADSRPKFRELI 271
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 110/254 (43%), Gaps = 43/254 (16%)
Query: 32 IGEGAHAKVYEGKYKNQT------VAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G GA VY+G + + VAIK + + +P+ A KE E +++ V + +
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKE--ILDEAYVMASVDNPH 80
Query: 86 LVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
+ + +G C + ++ +L+ G L Y+ + + + + + IA+ M L
Sbjct: 81 VCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR 139
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEM-MTAETGTY--RWMAPE-LYSTVT 201
++HRDL N+L+ + +K+ DFGLA+ E AE G +WMA E + +
Sbjct: 140 LVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 198
Query: 202 LRQGEKKHYNH---------------------KNVRPSAENVPE------ELSIILTSCW 234
Q + Y ++ E +P+ ++ +I+ CW
Sbjct: 199 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCW 258
Query: 235 KEDPNARPNFTQII 248
D ++RP F ++I
Sbjct: 259 MIDADSRPKFRELI 272
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 110/254 (43%), Gaps = 43/254 (16%)
Query: 32 IGEGAHAKVYEGKYKNQT------VAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G GA VY+G + + VAIK + + +P+ A KE E +++ V + +
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKE--ILDEAYVMASVDNPH 85
Query: 86 LVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
+ + +G C + ++T+L+ G L Y+ + + + + + IA+ M L
Sbjct: 86 VCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR 144
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEM-MTAETGTY--RWMAPE-LYSTVT 201
++HRDL N+L+ + +K+ DFG A+ E AE G +WMA E + +
Sbjct: 145 LVHRDLAARNVLVKTP-QHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 203
Query: 202 LRQGEKKHYNH---------------------KNVRPSAENVPE------ELSIILTSCW 234
Q + Y ++ E +P+ ++ +I+ CW
Sbjct: 204 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCW 263
Query: 235 KEDPNARPNFTQII 248
D ++RP F ++I
Sbjct: 264 MIDADSRPKFRELI 277
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 110/254 (43%), Gaps = 43/254 (16%)
Query: 32 IGEGAHAKVYEGKYKNQT------VAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+ GA VY+G + + VAIK + + +P+ A KE E +++ V + +
Sbjct: 23 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKE--ILDEAYVMASVDNPH 78
Query: 86 LVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
+ + +G C + ++T+L+ G L Y+ + + + + + IA+ M L
Sbjct: 79 VCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEM-MTAETGTY--RWMAPE-LYSTVT 201
++HRDL N+L+ + +K+ DFGLA+ E AE G +WMA E + +
Sbjct: 138 LVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196
Query: 202 LRQGEKKHYNH---------------------KNVRPSAENVPE------ELSIILTSCW 234
Q + Y ++ E +P+ ++ +I+ CW
Sbjct: 197 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCW 256
Query: 235 KEDPNARPNFTQII 248
D ++RP F ++I
Sbjct: 257 MIDADSRPKFRELI 270
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 110/254 (43%), Gaps = 43/254 (16%)
Query: 32 IGEGAHAKVYEGKYKNQT------VAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G GA VY+G + + VAIK + + +P+ A KE E +++ V + +
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKE--ILDEAYVMASVDNPH 78
Query: 86 LVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
+ + +G C + ++T+L+ G L Y+ + + + + + IA+ M L
Sbjct: 79 VCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEM-MTAETGTY--RWMAPE-LYSTVT 201
++HRDL N+L+ + +K+ DFG A+ E AE G +WMA E + +
Sbjct: 138 LVHRDLAARNVLVKTP-QHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196
Query: 202 LRQGEKKHYNH---------------------KNVRPSAENVPE------ELSIILTSCW 234
Q + Y ++ E +P+ ++ +I+ CW
Sbjct: 197 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCW 256
Query: 235 KEDPNARPNFTQII 248
D ++RP F ++I
Sbjct: 257 MIDADSRPKFRELI 270
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 110/254 (43%), Gaps = 43/254 (16%)
Query: 32 IGEGAHAKVYEGKYKNQT------VAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+ GA VY+G + + VAIK + + +P+ A KE E +++ V + +
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKE--ILDEAYVMASVDNPH 85
Query: 86 LVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
+ + +G C + ++T+L+ G L Y+ + + + + + IA+ M L
Sbjct: 86 VCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR 144
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEM-MTAETGTY--RWMAPE-LYSTVT 201
++HRDL N+L+ + +K+ DFGLA+ E AE G +WMA E + +
Sbjct: 145 LVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 203
Query: 202 LRQGEKKHYNH---------------------KNVRPSAENVPE------ELSIILTSCW 234
Q + Y ++ E +P+ ++ +I+ CW
Sbjct: 204 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCW 263
Query: 235 KEDPNARPNFTQII 248
D ++RP F ++I
Sbjct: 264 MIDADSRPKFRELI 277
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 93/192 (48%), Gaps = 28/192 (14%)
Query: 23 PKHLF----VGPRIGEGAHAKVYEGK--YKNQTVAIKIVHKGETPEEIAKKES---RFAR 73
P HL +G +G G ++V+ + ++ VA+K++ ++A+ S RF R
Sbjct: 7 PSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRA-----DLARDPSFYLRFRR 61
Query: 74 EVAMLSRVQHRNLVKFIGACKE-----PVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAI 128
E + + H +V + P+ IV E + G TLR + P + AI
Sbjct: 62 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAI 119
Query: 129 GFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLARE-----ESLTEMMT 183
D +A+ H +GIIHRD+KP N++++ +K+ DFG+AR S+T+
Sbjct: 120 EVIADACQALNFSHQNGIIHRDVKPANIMISA-TNAVKVMDFGIARAIADSGNSVTQ-TA 177
Query: 184 AETGTYRWMAPE 195
A GT ++++PE
Sbjct: 178 AVIGTAQYLSPE 189
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V Y ++ V K P + R RE+ +L
Sbjct: 47 WEVPERYQTLSP-VGSGAYGSVC-SSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLL 104
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 105 KHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGAD------LNNIVKCQKLTDDHVQF 158
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED + +K+ DFGLAR + MT T
Sbjct: 159 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTD--DEMTGYVATR 215
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 216 WYRAPEI 222
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 93/192 (48%), Gaps = 28/192 (14%)
Query: 23 PKHLF----VGPRIGEGAHAKVYEGK--YKNQTVAIKIVHKGETPEEIAKKES---RFAR 73
P HL +G +G G ++V+ + ++ VA+K++ ++A+ S RF R
Sbjct: 7 PSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRA-----DLARDPSFYLRFRR 61
Query: 74 EVAMLSRVQHRNLVKFIGACKE-----PVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAI 128
E + + H +V + P+ IV E + G TLR + P + AI
Sbjct: 62 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAI 119
Query: 129 GFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLARE-----ESLTEMMT 183
D +A+ H +GIIHRD+KP N++++ +K+ DFG+AR S+T+
Sbjct: 120 EVIADACQALNFSHQNGIIHRDVKPANIMISA-TNAVKVMDFGIARAIADSGNSVTQ-TA 177
Query: 184 AETGTYRWMAPE 195
A GT ++++PE
Sbjct: 178 AVIGTAQYLSPE 189
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 84/179 (46%), Gaps = 21/179 (11%)
Query: 32 IGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
IG GA+ V + + Q VAIK + ++ R RE+ +L +H N++
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAF---DVVTNAKRTLRELKILKHFKHDNIIAI 119
Query: 90 IGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLH 142
+ V + +V +L+ L + + + +P L+ F + R ++ +H
Sbjct: 120 KDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRY--FLYQLLRGLKYMH 176
Query: 143 SHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTE-----MMTAETGTYRWMAPEL 196
S +IHRDLKP NLL+ E+ + +K+ DFG+AR + MT T + APEL
Sbjct: 177 SAQVIHRDLKPSNLLVNENCE-LKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPEL 234
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 102/233 (43%), Gaps = 25/233 (10%)
Query: 31 RIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRV-QHRNLVKF 89
R+G G++ +V++ + K + V + +P K +R EV +V QH V+
Sbjct: 64 RLGHGSYGEVFKVRSKEDG-RLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRL 122
Query: 90 IGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIHR 149
A +E ++ + L G +L+++ L G+ D A+ LHS G++H
Sbjct: 123 EQAWEEGGILYLQTELCGPSLQQHC-EAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHL 181
Query: 150 DLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRQGEKKH 209
D+KP N+ L + KL DFGL E + G R+MAPEL QG
Sbjct: 182 DVKPANIFLGPRGR-CKLGDFGLLVELGTAGAGEVQEGDPRYMAPELL------QG---- 230
Query: 210 YNHKNVRPSAENVPEELSIILTSCWKEDPNARPNFTQIIQMLLNYLSAIAPPE 262
+ +A+ L+I+ +C E P+ + Q+ Q YL PPE
Sbjct: 231 ----SYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQ---GYL----PPE 272
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 84/179 (46%), Gaps = 21/179 (11%)
Query: 32 IGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
IG GA+ V + + Q VAIK K ++ R RE+ +L +H N++
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIK---KIPNAFDVVTNAKRTLRELKILKHFKHDNIIAI 118
Query: 90 IGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLH 142
+ V + +V +L+ L + + + +P L+ F + R ++ +H
Sbjct: 119 KDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRY--FLYQLLRGLKYMH 175
Query: 143 SHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTE-----MMTAETGTYRWMAPEL 196
S +IHRDLKP NLL+ E+ + +K+ DFG+AR + MT T + APEL
Sbjct: 176 SAQVIHRDLKPSNLLVNENCE-LKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPEL 233
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 85/187 (45%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P IG GA+ V + +T V K P + R RE+ +L
Sbjct: 23 WEVPERYQNLSP-IGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 80
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 81 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------LNNIVKCQKLTDDHVQF 134
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED + +K+ DFGLAR + MT T
Sbjct: 135 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXE-LKILDFGLARHTD--DEMTGYVATR 191
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 192 WYRAPEI 198
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 23/169 (13%)
Query: 44 KYKNQTVAIKIVHKGE-TPEEIAKKESRFAREVAMLSRV-QHRNLVKFIGACKEPVMV-I 100
K N A+KI+ K + P E E+ +L R QH N++ + V +
Sbjct: 44 KATNXEFAVKIIDKSKRDPTE----------EIEILLRYGQHPNIITLKDVYDDGKYVYV 93
Query: 101 VTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIHRDLKPENLLLTE 160
VTEL GG L +L R + A I + +E LH+ G++HRDLKP N+L +
Sbjct: 94 VTELXKGGELLDKIL--RQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVD 151
Query: 161 DL---KTIKLADFGLARE-ESLTEMMTAETGTYRWMAPELYSTVTLRQG 205
+ ++I++ DFG A++ + ++ T ++APE V RQG
Sbjct: 152 ESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPE----VLERQG 196
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 14/184 (7%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 18 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 79 SRVQHRNLVKFIG------ACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFAL 132
++H N++ + + +E V + L G L + + V I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLI---Y 132
Query: 133 DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWM 192
I R ++ +HS IIHRDLKP NL + ED + +K+ DFGLAR + MT T +
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDXE-LKILDFGLARHTD--DEMTGYVATRWYR 189
Query: 193 APEL 196
APE+
Sbjct: 190 APEI 193
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 110/254 (43%), Gaps = 43/254 (16%)
Query: 32 IGEGAHAKVYEGKYKNQT------VAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G GA VY+G + + VAIK + + +P+ A KE E +++ V + +
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKE--ILDEAYVMASVDNPH 80
Query: 86 LVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
+ + +G C + ++T+L+ G L Y+ + + + + + IA+ M L
Sbjct: 81 VCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR 139
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEM-MTAETGTY--RWMAPE-LYSTVT 201
++HRDL N+L+ + +K+ DFG A+ E AE G +WMA E + +
Sbjct: 140 LVHRDLAARNVLVKTP-QHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 198
Query: 202 LRQGEKKHYNH---------------------KNVRPSAENVPE------ELSIILTSCW 234
Q + Y ++ E +P+ ++ +I+ CW
Sbjct: 199 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCW 258
Query: 235 KEDPNARPNFTQII 248
D ++RP F ++I
Sbjct: 259 MIDADSRPKFRELI 272
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 88/185 (47%), Gaps = 32/185 (17%)
Query: 32 IGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRV--QHRNLVKF 89
+G+G + +V+ G ++ + VA+KI ++ E + RE + + V +H N++ F
Sbjct: 45 VGKGRYGEVWRGSWQGENVAVKIFS--------SRDEKSWFRETELYNTVMLRHENILGF 96
Query: 90 IGA-----CKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLH-- 142
I + + ++T G+L YL + LD + L IA + LH
Sbjct: 97 IASDMTSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIE 153
Query: 143 ---SHG---IIHRDLKPENLLLTEDLKTIKLADFGLA--REESLTEMMTAE---TGTYRW 191
+ G I HRDLK +N+L+ ++ + +AD GLA +S ++ GT R+
Sbjct: 154 IFGTQGKPAIAHRDLKSKNILVKKNGQCC-IADLGLAVMHSQSTNQLDVGNNPRVGTKRY 212
Query: 192 MAPEL 196
MAPE+
Sbjct: 213 MAPEV 217
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 88/185 (47%), Gaps = 32/185 (17%)
Query: 32 IGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRV--QHRNLVKF 89
+G+G + +V+ G ++ + VA+KI ++ E + RE + + V +H N++ F
Sbjct: 16 VGKGRYGEVWRGSWQGENVAVKIFS--------SRDEKSWFRETELYNTVMLRHENILGF 67
Query: 90 IGA-----CKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLH-- 142
I + + ++T G+L YL + LD + L IA + LH
Sbjct: 68 IASDMTSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIE 124
Query: 143 ---SHG---IIHRDLKPENLLLTEDLKTIKLADFGLA--REESLTEMMTAE---TGTYRW 191
+ G I HRDLK +N+L+ ++ + +AD GLA +S ++ GT R+
Sbjct: 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCC-IADLGLAVMHSQSTNQLDVGNNPRVGTKRY 183
Query: 192 MAPEL 196
MAPE+
Sbjct: 184 MAPEV 188
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 88/185 (47%), Gaps = 32/185 (17%)
Query: 32 IGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRV--QHRNLVKF 89
+G+G + +V+ G ++ + VA+KI ++ E + RE + + V +H N++ F
Sbjct: 16 VGKGRYGEVWRGSWQGENVAVKIFS--------SRDEKSWFRETELYNTVMLRHENILGF 67
Query: 90 IGA-----CKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLH-- 142
I + + ++T G+L YL + LD + L IA + LH
Sbjct: 68 IASDMTSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIE 124
Query: 143 ---SHG---IIHRDLKPENLLLTEDLKTIKLADFGLA--REESLTEMMTAE---TGTYRW 191
+ G I HRDLK +N+L+ ++ + +AD GLA +S ++ GT R+
Sbjct: 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCC-IADLGLAVMHSQSTNQLDVGNNPRVGTKRY 183
Query: 192 MAPEL 196
MAPE+
Sbjct: 184 MAPEV 188
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 14/184 (7%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 18 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 79 SRVQHRNLVKFIG------ACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFAL 132
++H N++ + + +E V + L G L + + V I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLI---Y 132
Query: 133 DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWM 192
I R ++ +HS IIHRDLKP NL + ED + +K+ DFGLAR + MT T +
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTD--DEMTGYVATRWYR 189
Query: 193 APEL 196
APE+
Sbjct: 190 APEI 193
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 94/195 (48%), Gaps = 28/195 (14%)
Query: 20 LIDPKHLF----VGPRIGEGAHAKVYEGK--YKNQTVAIKIVHKGETPEEIAKKES---R 70
+ P HL +G +G G ++V+ + ++ VA+K++ ++A+ S R
Sbjct: 4 MTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRA-----DLARDPSFYLR 58
Query: 71 FAREVAMLSRVQHRNLVKFIGACKE-----PVMVIVTELLSGGTLRKYLLNMRPRCLDVC 125
F RE + + H +V + P+ IV E + G TLR + P +
Sbjct: 59 FRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPK 116
Query: 126 VAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLARE-----ESLTE 180
AI D +A+ H +GIIHRD+KP N++++ +K+ DFG+AR S+T+
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANIMISA-TNAVKVMDFGIARAIADSGNSVTQ 175
Query: 181 MMTAETGTYRWMAPE 195
A GT ++++PE
Sbjct: 176 -TAAVIGTAQYLSPE 189
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 84/172 (48%), Gaps = 17/172 (9%)
Query: 32 IGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQ-HRNLVK 88
+GEG+ + + +K NQ A+KI+ K + E+ +E+ L + H N+VK
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISK--------RMEANTQKEITALKLCEGHPNIVK 70
Query: 89 FIGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGII 147
+ + +V ELL+GG L + + + + A + A+ +H G++
Sbjct: 71 LHEVFHDQLHTFLVMELLNGGELFERI--KKKKHFSETEASYIMRKLVSAVSHMHDVGVV 128
Query: 148 HRDLKPENLLLTE--DLKTIKLADFGLAR-EESLTEMMTAETGTYRWMAPEL 196
HRDLKPENLL T+ D IK+ DFG AR + + + T + APEL
Sbjct: 129 HRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPEL 180
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 86/187 (45%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 25 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 82
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 83 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------LNNIVKCQKLTDDHVQF 136
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED + +K+ DFGLAR + + MT T
Sbjct: 137 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTA--DEMTGYVATR 193
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 194 WYRAPEI 200
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 86/187 (45%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 25 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 82
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 83 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------LNNIVKCQKLTDDHVQF 136
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED + +K+ DFGLAR + + MT T
Sbjct: 137 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTA--DEMTGYVATR 193
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 194 WYRAPEI 200
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 18 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------LNNIVKCQKLTDDHVQF 129
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED + +K+ DFGLAR + MT T
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTD--DEMTGXVATR 186
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 187 WYRAPEI 193
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 23/161 (14%)
Query: 47 NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKFIGA-CKEPVMVIVTELL 105
Q A KI++ T + A+ + RE + ++H N+V+ + +E ++ +L+
Sbjct: 47 GQEYAAKIIN---TKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLV 103
Query: 106 SGGTL------RKYLLNMRP-RCLDVCVAIGFALDIARAMECLHSHGIIHRDLKPENLLL 158
+GG L R+Y C+ I A+ H G++HRDLKPENLLL
Sbjct: 104 TGGELFEDIVAREYYSEADASHCIQ---------QILEAVLHCHQMGVVHRDLKPENLLL 154
Query: 159 TEDLK--TIKLADFGLARE-ESLTEMMTAETGTYRWMAPEL 196
LK +KLADFGLA E E + GT +++PE+
Sbjct: 155 ASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEV 195
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 89/181 (49%), Gaps = 23/181 (12%)
Query: 28 VGPRIGEGAHAKVYEGK--YKNQTVAIKIV-HKGETPEEIAKKESRFAREVAMLSRVQHR 84
VG +IG G ++ GK Y N+ VAIK+ K P+ E RF +++ +
Sbjct: 13 VGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQ--LHLEYRFYKQLGSGDGIPQ- 69
Query: 85 NLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
V + G C + +V ELL G +L L ++ R + + A+ + ME +HS
Sbjct: 70 --VYYFGPCGK-YNAMVLELL-GPSLED-LFDLCDRTFSLKTVLMIAIQLISRMEYVHSK 124
Query: 145 GIIHRDLKPENLLL----TEDLKTIKLADFGLARE----ESLTEMMTAE----TGTYRWM 192
+I+RD+KPEN L+ + + I + DFGLA+E E+ + E TGT R+M
Sbjct: 125 NLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYM 184
Query: 193 A 193
+
Sbjct: 185 S 185
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 86/187 (45%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 25 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 82
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 83 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------LNNIVKCQKLTDDHVQF 136
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED + +K+ DFGLAR + + MT T
Sbjct: 137 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTA--DEMTGYVATR 193
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 194 WYRAPEI 200
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 80/169 (47%), Gaps = 9/169 (5%)
Query: 31 RIGEGAHAKVYEG-KYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+IG G +KV++ K Q AIK V+ E + + E+A L+++Q +
Sbjct: 35 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTL---DSYRNEIAYLNKLQQHSDKII 91
Query: 90 IGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIHR 149
E + ++ G + + + +D + ++ A+ +H HGI+H
Sbjct: 92 RLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHS 151
Query: 150 DLKPENLLLTEDLKTIKLADFGLARE---ESLTEMMTAETGTYRWMAPE 195
DLKP N L+ + + +KL DFG+A + ++ + + ++ GT +M PE
Sbjct: 152 DLKPANFLIVDGM--LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 198
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 81/181 (44%), Gaps = 21/181 (11%)
Query: 29 GPRIGEGAHAKVYEGKYKNQTV--AIKIVHKGETPEEIAKKESR-------FAREVAMLS 79
G +G G A V + + K+ + A K + K T K SR REV++L
Sbjct: 16 GEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRT------KSSRRGVSREDIEREVSILK 69
Query: 80 RVQHRNLVKFIGACKEPVMVI-VTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAM 138
+QH N++ + VI + EL++GG L +L L A F I +
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGV 127
Query: 139 ECLHSHGIIHRDLKPENLLLTED---LKTIKLADFGLAREESLTEMMTAETGTYRWMAPE 195
LHS I H DLKPEN++L + IK+ DFGLA + GT ++APE
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 196 L 196
+
Sbjct: 188 I 188
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 23 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 80
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 81 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------LNNIVKCQKLTDDHVQF 134
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED + +K+ DFGLAR + MT T
Sbjct: 135 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXE-LKILDFGLARHTD--DEMTGYVATR 191
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 192 WYRAPEI 198
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 91/203 (44%), Gaps = 22/203 (10%)
Query: 3 SRSRFYLADELKLDAKWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPE 62
SR FY + K W + ++ + P +G GA+ V + +T V K P
Sbjct: 2 SRPTFYRQELNK--TIWEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPF 57
Query: 63 EIAKKESRFAREVAMLSRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLL 115
+ R RE+ +L ++H N++ + + +VT L+ L
Sbjct: 58 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------L 111
Query: 116 NMRPRCLDVCVA-IGFAL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLA 173
N +C + + F + I R ++ +HS IIHRDLKP NL + ED + +K+ DFGLA
Sbjct: 112 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLA 170
Query: 174 REESLTEMMTAETGTYRWMAPEL 196
R + MT T + APE+
Sbjct: 171 RHTD--DEMTGYVATRWYRAPEI 191
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 82/171 (47%), Gaps = 13/171 (7%)
Query: 31 RIGEGAHAKVYEG-KYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN--LV 87
+IG G +KV++ K Q AIK V+ E + + E+A L+++Q + ++
Sbjct: 19 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTL---DSYRNEIAYLNKLQQHSDKII 75
Query: 88 KFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGII 147
+ + + L +L + + +D + ++ A+ +H HGI+
Sbjct: 76 RLYDYEITDQYIYMVMECGNIDLNSWL--KKKKSIDPWERKSYWKNMLEAVHTIHQHGIV 133
Query: 148 HRDLKPENLLLTEDLKTIKLADFGLARE---ESLTEMMTAETGTYRWMAPE 195
H DLKP N L+ + + +KL DFG+A + ++ + + ++ GT +M PE
Sbjct: 134 HSDLKPANFLIVDGM--LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 182
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 81/181 (44%), Gaps = 21/181 (11%)
Query: 29 GPRIGEGAHAKVYEGKYKNQTV--AIKIVHKGETPEEIAKKESR-------FAREVAMLS 79
G +G G A V + + K+ + A K + K T K SR REV++L
Sbjct: 15 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRT------KSSRRGVSREDIEREVSILK 68
Query: 80 RVQHRNLVKFIGACKEPVMVI-VTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAM 138
+QH N++ + VI + EL++GG L +L L A F I +
Sbjct: 69 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGV 126
Query: 139 ECLHSHGIIHRDLKPENLLLTED---LKTIKLADFGLAREESLTEMMTAETGTYRWMAPE 195
LHS I H DLKPEN++L + IK+ DFGLA + GT ++APE
Sbjct: 127 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 186
Query: 196 L 196
+
Sbjct: 187 I 187
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 18 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------LNNIVKCQKLTDDHVQF 129
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED + +K+ DFGLAR + MT T
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTD--DEMTGYVATR 186
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 187 WYRAPEI 193
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 81/181 (44%), Gaps = 21/181 (11%)
Query: 29 GPRIGEGAHAKVYEGKYKNQTV--AIKIVHKGETPEEIAKKESR-------FAREVAMLS 79
G +G G A V + + K+ + A K + K T K SR REV++L
Sbjct: 15 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRT------KSSRRGVSREDIEREVSILK 68
Query: 80 RVQHRNLVKFIGACKEPVMVI-VTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAM 138
+QH N++ + VI + EL++GG L +L L A F I +
Sbjct: 69 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGV 126
Query: 139 ECLHSHGIIHRDLKPENLLLTED---LKTIKLADFGLAREESLTEMMTAETGTYRWMAPE 195
LHS I H DLKPEN++L + IK+ DFGLA + GT ++APE
Sbjct: 127 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 186
Query: 196 L 196
+
Sbjct: 187 I 187
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 29 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 86
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 87 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------LNNIVKCQKLTDDHVQF 140
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED + +K+ DFGLAR + MT T
Sbjct: 141 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXE-LKILDFGLARHTD--DEMTGYVATR 197
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 198 WYRAPEI 204
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 20 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 77
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 78 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------LNNIVKCQKLTDDHVQF 131
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED + +K+ DFGLAR + MT T
Sbjct: 132 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTD--DEMTGYVATR 188
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 189 WYRAPEI 195
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 18 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------LNNIVKCQKLTDDHVQF 129
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED + +K+ DFGLAR + MT T
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTD--DEMTGYVATR 186
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 187 WYRAPEI 193
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 82/170 (48%), Gaps = 12/170 (7%)
Query: 32 IGEGAHAKVYEGKY--KNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
IG G AKV + + VAIKI+ K ++ R E+ L ++H+++ +
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLP----RIKTEIEALKNLRHQHICQL 73
Query: 90 IGACKEP-VMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
+ + +V E GG L Y+++ + R + + F I A+ +HS G H
Sbjct: 74 YHVLETANKIFMVLEYCPGGELFDYIIS-QDRLSEEETRVVFR-QIVSAVAYVHSQGYAH 131
Query: 149 RDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAET--GTYRWMAPEL 196
RDLKPENLL E K +KL DFGL + + +T G+ + APEL
Sbjct: 132 RDLKPENLLFDEYHK-LKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPEL 180
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 80/169 (47%), Gaps = 9/169 (5%)
Query: 31 RIGEGAHAKVYEG-KYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+IG G +KV++ K Q AIK V+ E + + E+A L+++Q +
Sbjct: 63 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTL---DSYRNEIAYLNKLQQHSDKII 119
Query: 90 IGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIHR 149
E + ++ G + + + +D + ++ A+ +H HGI+H
Sbjct: 120 RLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHS 179
Query: 150 DLKPENLLLTEDLKTIKLADFGLARE---ESLTEMMTAETGTYRWMAPE 195
DLKP N L+ + + +KL DFG+A + ++ + + ++ GT +M PE
Sbjct: 180 DLKPANFLIVDGM--LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 226
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 93/192 (48%), Gaps = 28/192 (14%)
Query: 23 PKHLF----VGPRIGEGAHAKVYEGK--YKNQTVAIKIVHKGETPEEIAKKES---RFAR 73
P HL +G +G G ++V+ + ++ VA+K++ ++A+ S RF R
Sbjct: 7 PSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRA-----DLARDPSFYLRFRR 61
Query: 74 EVAMLSRVQHRNLVKFIGACKE-----PVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAI 128
E + + H +V + P+ IV E + G TLR + P + AI
Sbjct: 62 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAI 119
Query: 129 GFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLARE-----ESLTEMMT 183
D +A+ H +GIIHRD+KP N++++ +K+ DFG+AR S+T+
Sbjct: 120 EVIADACQALNFSHQNGIIHRDVKPANIMISA-TNAVKVMDFGIARAIADSGNSVTQ-TA 177
Query: 184 AETGTYRWMAPE 195
A GT ++++PE
Sbjct: 178 AVIGTAQYLSPE 189
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 18 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------LNNIVKCQKLTDDHVQF 129
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED + +K+ DFGLAR + MT T
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTD--DEMTGYVATR 186
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 187 WYRAPEI 193
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 81/181 (44%), Gaps = 21/181 (11%)
Query: 29 GPRIGEGAHAKVYEGKYKNQTV--AIKIVHKGETPEEIAKKESR-------FAREVAMLS 79
G +G G A V + + K+ + A K + K T K SR REV++L
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRT------KSSRRGVSREDIEREVSILK 69
Query: 80 RVQHRNLVKFIGACKEPVMVI-VTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAM 138
+QH N++ + VI + EL++GG L +L L A F I +
Sbjct: 70 EIQHPNVITLHEVYENKTDVILIGELVAGGELFDFL--AEKESLTEEEATEFLKQILNGV 127
Query: 139 ECLHSHGIIHRDLKPENLLLTED---LKTIKLADFGLAREESLTEMMTAETGTYRWMAPE 195
LHS I H DLKPEN++L + IK+ DFGLA + GT ++APE
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 196 L 196
+
Sbjct: 188 I 188
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 25 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 82
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 83 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------LNNIVKCQKLTDDHVQF 136
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED + +K+ DFGLAR + MT T
Sbjct: 137 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTD--DEMTGYVATR 193
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 194 WYRAPEI 200
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 30 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLL 87
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 88 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------LNNIVKCQKLTDDHVQF 141
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED + +K+ DFGLAR + MT T
Sbjct: 142 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTD--DEMTGYVATR 198
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 199 WYRAPEI 205
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 81/181 (44%), Gaps = 21/181 (11%)
Query: 29 GPRIGEGAHAKVYEGKYKNQTV--AIKIVHKGETPEEIAKKESR-------FAREVAMLS 79
G +G G A V + + K+ + A K + K T K SR REV++L
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRT------KSSRRGVSREDIEREVSILK 69
Query: 80 RVQHRNLVKFIGACKEPVMVI-VTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAM 138
+QH N++ + VI + EL++GG L +L L A F I +
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGV 127
Query: 139 ECLHSHGIIHRDLKPENLLLTED---LKTIKLADFGLAREESLTEMMTAETGTYRWMAPE 195
LHS I H DLKPEN++L + IK+ DFGLA + GT ++APE
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 196 L 196
+
Sbjct: 188 I 188
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 81/181 (44%), Gaps = 21/181 (11%)
Query: 29 GPRIGEGAHAKVYEGKYKNQTV--AIKIVHKGETPEEIAKKESR-------FAREVAMLS 79
G +G G A V + + K+ + A K + K T K SR REV++L
Sbjct: 16 GEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRT------KSSRRGVSREDIEREVSILK 69
Query: 80 RVQHRNLVKFIGACKEPVMVI-VTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAM 138
+QH N++ + VI + EL++GG L +L L A F I +
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGV 127
Query: 139 ECLHSHGIIHRDLKPENLLLTED---LKTIKLADFGLAREESLTEMMTAETGTYRWMAPE 195
LHS I H DLKPEN++L + IK+ DFGLA + GT ++APE
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 196 L 196
+
Sbjct: 188 I 188
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 15 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 72
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 73 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------LNNIVKCQKLTDDHVQF 126
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED + +K+ DFGLAR + MT T
Sbjct: 127 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTD--DEMTGYVATR 183
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 184 WYRAPEI 190
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 18 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------LNNIVKCQKLTDDHVQF 129
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED + +K+ DFGLAR + MT T
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTD--DEMTGYVATR 186
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 187 WYRAPEI 193
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 28 WEVPERYQNLAP-VGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 85
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 86 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------LNNIVKCQKLTDDHVQF 139
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED + +K+ DFGLAR + MT T
Sbjct: 140 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTD--DEMTGYVATR 196
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 197 WYRAPEI 203
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 18 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------LNNIVKCQKLTDDHVQF 129
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED + +K+ DFGLAR + MT T
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTD--DEMTGYVATR 186
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 187 WYRAPEI 193
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 109/268 (40%), Gaps = 46/268 (17%)
Query: 21 IDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSR 80
ID K L ++ E ++++G+++ + +K++ + + +K F E L
Sbjct: 7 IDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVL---KVRDWSTRKSRDFNEECPRLRI 63
Query: 81 VQHRNLVKFIGACKEPVM---VIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARA 137
H N++ +GAC+ P ++T + G+L L +D A+ FALD+AR
Sbjct: 64 FSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARG 123
Query: 138 MECLHS-HGIIHRD-LKPENLLLTEDLKT-IKLADFGLAREESLTEMMTAETGTYRWMAP 194
M LH+ +I R L ++++ ED+ I +AD + + A W+AP
Sbjct: 124 MAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMYAPA------WVAP 177
Query: 195 E----------------------LYSTVTLRQGEKKHYNH--------KNVRPS-AENVP 223
E L+ VT N + +RP+ +
Sbjct: 178 EALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGIS 237
Query: 224 EELSIILTSCWKEDPNARPNFTQIIQML 251
+S ++ C EDP RP F I+ +L
Sbjct: 238 PHVSKLMKICMNEDPAKRPKFDMIVPIL 265
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 23 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 80
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 81 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------LNNIVKCQKLTDDHVQF 134
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED + +K+ DFGLAR + MT T
Sbjct: 135 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTD--DEMTGYVATR 191
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 192 WYRAPEI 198
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 17 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 74
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 75 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------LNNIVKCQKLTDDHVQF 128
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED + +K+ DFGLAR + MT T
Sbjct: 129 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTD--DEMTGYVATR 185
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 186 WYRAPEI 192
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 18 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------LNNIVKCQKLTDDHVQF 129
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED + +K+ DFGLAR + MT T
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTD--DEMTGYVATR 186
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 187 WYRAPEI 193
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 80/169 (47%), Gaps = 9/169 (5%)
Query: 31 RIGEGAHAKVYEG-KYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+IG G +KV++ K Q AIK V+ E + + E+A L+++Q +
Sbjct: 16 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTL---DSYRNEIAYLNKLQQHSDKII 72
Query: 90 IGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIHR 149
E + ++ G + + + +D + ++ A+ +H HGI+H
Sbjct: 73 RLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHS 132
Query: 150 DLKPENLLLTEDLKTIKLADFGLARE---ESLTEMMTAETGTYRWMAPE 195
DLKP N L+ + + +KL DFG+A + ++ + + ++ GT +M PE
Sbjct: 133 DLKPANFLIVDGM--LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 179
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 15 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 72
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 73 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------LNNIVKCQKLTDDHVQF 126
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED + +K+ DFGLAR + MT T
Sbjct: 127 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTD--DEMTGYVATR 183
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 184 WYRAPEI 190
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 20 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 77
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 78 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------LNNIVKCQKLTDDHVQF 131
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED + +K+ DFGLAR + MT T
Sbjct: 132 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTD--DEMTGYVATR 188
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 189 WYRAPEI 195
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 14 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 71
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 72 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------LNNIVKCQKLTDDHVQF 125
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED + +K+ DFGLAR + MT T
Sbjct: 126 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTD--DEMTGYVATR 182
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 183 WYRAPEI 189
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 81/181 (44%), Gaps = 21/181 (11%)
Query: 29 GPRIGEGAHAKVYEGKYKNQTV--AIKIVHKGETPEEIAKKESR-------FAREVAMLS 79
G +G G A V + + K+ + A K + K T K SR REV++L
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRT------KSSRRGVSREDIEREVSILK 69
Query: 80 RVQHRNLVKFIGACKEPVMVI-VTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAM 138
+QH N++ + VI + EL++GG L +L L A F I +
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGV 127
Query: 139 ECLHSHGIIHRDLKPENLLLTED---LKTIKLADFGLAREESLTEMMTAETGTYRWMAPE 195
LHS I H DLKPEN++L + IK+ DFGLA + GT ++APE
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 196 L 196
+
Sbjct: 188 I 188
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 18 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------LNNIVKCQKLTDDHVQF 129
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED + +K+ DFGLAR + MT T
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTD--DEMTGYVATR 186
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 187 WYRAPEI 193
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 18 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------LNNIVKCQKLTDDHVQF 129
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED + +K+ DFGLAR + MT T
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTD--DEMTGYVATR 186
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 187 WYRAPEI 193
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 20 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 77
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 78 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------LNNIVKCQKLTDDHVQF 131
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED + +K+ DFGLAR + MT T
Sbjct: 132 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTD--DEMTGYVATR 188
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 189 WYRAPEI 195
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 80/169 (47%), Gaps = 9/169 (5%)
Query: 31 RIGEGAHAKVYEG-KYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+IG G +KV++ K Q AIK V+ E + + E+A L+++Q +
Sbjct: 63 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTL---DSYRNEIAYLNKLQQHSDKII 119
Query: 90 IGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIHR 149
E + ++ G + + + +D + ++ A+ +H HGI+H
Sbjct: 120 RLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHS 179
Query: 150 DLKPENLLLTEDLKTIKLADFGLARE---ESLTEMMTAETGTYRWMAPE 195
DLKP N L+ + + +KL DFG+A + ++ + + ++ GT +M PE
Sbjct: 180 DLKPANFLIVDGM--LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 226
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 14 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 71
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 72 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------LNNIVKCQKLTDDHVQF 125
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED + +K+ DFGLAR + MT T
Sbjct: 126 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTD--DEMTGYVATR 182
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 183 WYRAPEI 189
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 18 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------LNNIVKCQKLTDDHVQF 129
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED + +K+ DFGLAR + MT T
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTD--DEMTGYVATR 186
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 187 WYRAPEI 193
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 81/181 (44%), Gaps = 21/181 (11%)
Query: 29 GPRIGEGAHAKVYEGKYKNQTV--AIKIVHKGETPEEIAKKESR-------FAREVAMLS 79
G +G G A V + + K+ + A K + K T K SR REV++L
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRT------KSSRRGVSREDIEREVSILK 69
Query: 80 RVQHRNLVKFIGACKEPVMVI-VTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAM 138
+QH N++ + VI + EL++GG L +L L A F I +
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGV 127
Query: 139 ECLHSHGIIHRDLKPENLLLTED---LKTIKLADFGLAREESLTEMMTAETGTYRWMAPE 195
LHS I H DLKPEN++L + IK+ DFGLA + GT ++APE
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 196 L 196
+
Sbjct: 188 I 188
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 23 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 80
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 81 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------LNNIVKCQKLTDDHVQF 134
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED + +K+ DFGLAR + MT T
Sbjct: 135 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTD--DEMTGYVATR 191
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 192 WYRAPEI 198
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 29 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 86
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 87 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------LNNIVKCQKLTDDHVQF 140
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED + +K+ DFGLAR + MT T
Sbjct: 141 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTD--DEMTGYVATR 197
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 198 WYRAPEI 204
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 30 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 87
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 88 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------LNNIVKCQKLTDDHVQF 141
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED + +K+ DFGLAR + MT T
Sbjct: 142 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTD--DEMTGYVATR 198
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 199 WYRAPEI 205
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 84/187 (44%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 24 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 81
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 82 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------LNNIVKCQKLTDDHVQF 135
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED +K+ DFGLAR + MT T
Sbjct: 136 LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-SELKILDFGLARHTD--DEMTGYVATR 192
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 193 WYRAPEI 199
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 84/187 (44%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 20 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 77
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 78 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------LNNIVKCQKLTDDHVQF 131
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED +K+ DFGLAR + MT T
Sbjct: 132 LIYQILRGLKYIHSADIIHRDLKPSNLAVNED-SELKILDFGLARHTD--DEMTGYVATR 188
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 189 WYRAPEI 195
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 30 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 87
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 88 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------LNNIVKCQKLTDDHVQF 141
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED + +K+ DFGLAR + MT T
Sbjct: 142 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTD--DEMTGYVATR 198
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 199 WYRAPEI 205
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 14 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 71
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 72 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------LNNIVKCAKLTDDHVQF 125
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED + +K+ DFGLAR + MT T
Sbjct: 126 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTD--DEMTGYVATR 182
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 183 WYRAPEI 189
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 24 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 81
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 82 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------LNNIVKCQKLTDDHVQF 135
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED + +K+ DFGLAR + MT T
Sbjct: 136 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTD--DEMTGYVATR 192
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 193 WYRAPEI 199
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 81/181 (44%), Gaps = 21/181 (11%)
Query: 29 GPRIGEGAHAKVYEGKYKNQTV--AIKIVHKGETPEEIAKKESR-------FAREVAMLS 79
G +G G A V + + K+ + A K + K T K SR REV++L
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRT------KSSRRGVSREDIEREVSILK 69
Query: 80 RVQHRNLVKFIGACKEPVMVI-VTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAM 138
+QH N++ + VI + EL++GG L +L L A F I +
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGV 127
Query: 139 ECLHSHGIIHRDLKPENLLLTED---LKTIKLADFGLAREESLTEMMTAETGTYRWMAPE 195
LHS I H DLKPEN++L + IK+ DFGLA + GT ++APE
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 196 L 196
+
Sbjct: 188 I 188
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 83/186 (44%), Gaps = 23/186 (12%)
Query: 25 HLFVGPRIGEGAHAKVYEGKYKN--QTVAIKIVHK--------GETPEEIAKKESRFARE 74
H +G +G G A V + + K + A K + K G + EEI RE
Sbjct: 13 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIE-------RE 65
Query: 75 VAMLSRVQHRNLVKFIGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALD 133
V +L ++H N++ + +V++ EL+SGG L +L D A F
Sbjct: 66 VNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDE--ATQFLKQ 123
Query: 134 IARAMECLHSHGIIHRDLKPENLLLTED---LKTIKLADFGLAREESLTEMMTAETGTYR 190
I + LHS I H DLKPEN++L + IKL DFG+A + GT
Sbjct: 124 ILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPE 183
Query: 191 WMAPEL 196
++APE+
Sbjct: 184 FVAPEI 189
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 13/177 (7%)
Query: 29 GPRIGEGAHAKVYEGKYKNQTV--AIKIVHKGETPEE---IAKKESRFAREVAMLSRVQH 83
G +G G A V + + K+ + A K + K T +++++ REV++L +QH
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED--IEREVSILKEIQH 73
Query: 84 RNLVKFIGACKEPVMVI-VTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLH 142
N++ + VI + EL++GG L +L L A F I + LH
Sbjct: 74 PNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYLH 131
Query: 143 SHGIIHRDLKPENLLLTED---LKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
S I H DLKPEN++L + IK+ DFGLA + GT ++APE+
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 188
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 37 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 94
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 95 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------LNNIVKCQKLTDDHVQF 148
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED + +K+ DFGLAR + MT T
Sbjct: 149 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTD--DEMTGYVATR 205
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 206 WYRAPEI 212
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 97/258 (37%), Gaps = 40/258 (15%)
Query: 32 IGEGAHAKVYEGKYK---NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+G G V +G Y+ + K E + K E E ++ ++ + +V+
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDE--LLAEANVMQQLDNPYIVR 434
Query: 89 FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
IG C+ ++V E+ G L KYL R D + I ++ M+ L +H
Sbjct: 435 MIGICEAESWMLVMEMAELGPLNKYLQQNR-HVKDKNI-IELVHQVSMGMKYLEESNFVH 492
Query: 149 RDLKPENLLLTEDLKTIKLADFGLAR----EESLTEMMTAETGTYRWMAPELYSTVTLRQ 204
RDL N+LL K++DFGL++ +E+ + T +W APE +
Sbjct: 493 RDLAARNVLLVTQ-HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 551
Query: 205 -----------------GEKKHYNHKNVRPSA-----------ENVPEELSIILTSCWKE 236
G+K + K +A P E+ ++ CW
Sbjct: 552 KSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTY 611
Query: 237 DPNARPNFTQIIQMLLNY 254
D RP F + L NY
Sbjct: 612 DVENRPGFAAVELRLRNY 629
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 91/182 (50%), Gaps = 15/182 (8%)
Query: 22 DPKHLFVGPRIGEGAHAKVYEGKYK--NQTVAIKIVH---KGETPEEIAKKESRFAREVA 76
DPK + IG G + V ++ A+KI+ + +PE++ + RE
Sbjct: 97 DPKDV-----IGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETH 151
Query: 77 MLSRVQ-HRNLVKFIGACKEP-VMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDI 134
+L +V H +++ I + + M +V +L+ G L YL +I +L
Sbjct: 152 ILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSL-- 209
Query: 135 ARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAP 194
A+ LH++ I+HRDLKPEN+LL ++++ I+L+DFG + E + GT ++AP
Sbjct: 210 LEAVSFLHANNIVHRDLKPENILLDDNMQ-IRLSDFGFSCHLEPGEKLRELCGTPGYLAP 268
Query: 195 EL 196
E+
Sbjct: 269 EI 270
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 38 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 95
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 96 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------LNNIVKCQKLTDDHVQF 149
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED + +K+ DFGLAR + MT T
Sbjct: 150 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTD--DEMTGYVATR 206
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 207 WYRAPEI 213
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 24 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 81
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 82 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------LNNIVKCQKLTDDHVQF 135
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED + +K+ DFGLAR + MT T
Sbjct: 136 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTD--DEMTGYVATR 192
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 193 WYRAPEI 199
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 24 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 81
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 82 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------LNNIVKCQKLTDDHVQF 135
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED + +K+ DFGLAR + MT T
Sbjct: 136 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTD--DEMTGYVATR 192
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 193 WYRAPEI 199
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 81/181 (44%), Gaps = 21/181 (11%)
Query: 29 GPRIGEGAHAKVYEGKYKNQTV--AIKIVHKGETPEEIAKKESR-------FAREVAMLS 79
G +G G A V + + K+ + A K + K T K SR REV++L
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRT------KSSRRGVSREDIEREVSILK 69
Query: 80 RVQHRNLVKFIGACKEPVMVI-VTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAM 138
+QH N++ + VI + EL++GG L +L L A F I +
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGV 127
Query: 139 ECLHSHGIIHRDLKPENLLLTED---LKTIKLADFGLAREESLTEMMTAETGTYRWMAPE 195
LHS I H DLKPEN++L + IK+ DFGLA + GT ++APE
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 196 L 196
+
Sbjct: 188 I 188
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 37 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 94
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 95 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------LNNIVKCQKLTDDHVQF 148
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED + +K+ DFGLAR + MT T
Sbjct: 149 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTD--DEMTGYVATR 205
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 206 WYRAPEI 212
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 41 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 98
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 99 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------LNNIVKCQKLTDDHVQF 152
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED + +K+ DFGLAR + MT T
Sbjct: 153 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTD--DEMTGYVATR 209
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 210 WYRAPEI 216
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 97/258 (37%), Gaps = 40/258 (15%)
Query: 32 IGEGAHAKVYEGKYK---NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+G G V +G Y+ + K E + K E E ++ ++ + +V+
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDE--LLAEANVMQQLDNPYIVR 435
Query: 89 FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
IG C+ ++V E+ G L KYL R D + I ++ M+ L +H
Sbjct: 436 MIGICEAESWMLVMEMAELGPLNKYLQQNR-HVKDKNI-IELVHQVSMGMKYLEESNFVH 493
Query: 149 RDLKPENLLLTEDLKTIKLADFGLAR----EESLTEMMTAETGTYRWMAPELYSTVTLRQ 204
RDL N+LL K++DFGL++ +E+ + T +W APE +
Sbjct: 494 RDLAARNVLLVTQ-HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 552
Query: 205 -----------------GEKKHYNHKNVRPSA-----------ENVPEELSIILTSCWKE 236
G+K + K +A P E+ ++ CW
Sbjct: 553 KSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTY 612
Query: 237 DPNARPNFTQIIQMLLNY 254
D RP F + L NY
Sbjct: 613 DVENRPGFAAVELRLRNY 630
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 38 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 95
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 96 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------LNNIVKCQKLTDDHVQF 149
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED + +K+ DFGLAR + MT T
Sbjct: 150 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTD--DEMTGYVATR 206
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 207 WYRAPEI 213
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 13/177 (7%)
Query: 29 GPRIGEGAHAKVYEGKYKNQTV--AIKIVHKGETPEE---IAKKESRFAREVAMLSRVQH 83
G +G G A V + + K+ + A K + K T +++++ REV++L +QH
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED--IEREVSILKEIQH 73
Query: 84 RNLVKFIGACKEPVMVI-VTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLH 142
N++ + VI + EL++GG L +L L A F I + LH
Sbjct: 74 PNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYLH 131
Query: 143 SHGIIHRDLKPENLLLTED---LKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
S I H DLKPEN++L + IK+ DFGLA + GT ++APE+
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 188
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 96/190 (50%), Gaps = 21/190 (11%)
Query: 32 IGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRF-AREVAMLSRVQHRNLVK 88
IG GA +V ++K + A+K++ K E I + +S F E +++ +V+
Sbjct: 83 IGRGAFGEVQLVRHKASQKVYAMKLLSKFEM---IKRSDSAFFWEERDIMAFANSPWVVQ 139
Query: 89 FIGACKEP-VMVIVTELLSGGTLRKYLLNMRPRCLDV--CVAIGFALDIARAMECLHSHG 145
A ++ + +V E + GG L + N DV A + ++ A++ +HS G
Sbjct: 140 LFCAFQDDKYLYMVMEYMPGGDLVNLMSN-----YDVPEKWAKFYTAEVVLALDAIHSMG 194
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAET--GTYRWMAPELYSTVTLR 203
+IHRD+KP+N+LL + +KLADFG + T M+ +T GT +++PE+ +
Sbjct: 195 LIHRDVKPDNMLLDKH-GHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKS---- 249
Query: 204 QGEKKHYNHK 213
QG +Y +
Sbjct: 250 QGGDGYYGRE 259
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 81/173 (46%), Gaps = 8/173 (4%)
Query: 32 IGEGAHAKVYE--GKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
IG+GA + V + Q A+KIV + RE ++ ++H ++V+
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 90 IGA-CKEPVMVIVTELLSGGTLRKYLLNMRPRCL--DVCVAIGFALDIARAMECLHSHGI 146
+ + ++ +V E + G L ++ VA + I A+ H + I
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNI 151
Query: 147 IHRDLKPENLLLT--EDLKTIKLADFGLAREESLTEMMT-AETGTYRWMAPEL 196
IHRD+KPEN+LL E+ +KL DFG+A + + ++ GT +MAPE+
Sbjct: 152 IHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEV 204
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 80/169 (47%), Gaps = 9/169 (5%)
Query: 31 RIGEGAHAKVYEG-KYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+IG G +KV++ K Q AIK V+ E + + E+A L+++Q +
Sbjct: 15 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTL---DSYRNEIAYLNKLQQHSDKII 71
Query: 90 IGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIHR 149
E + ++ G + + + +D + ++ A+ +H HGI+H
Sbjct: 72 RLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHS 131
Query: 150 DLKPENLLLTEDLKTIKLADFGLARE---ESLTEMMTAETGTYRWMAPE 195
DLKP N L+ + + +KL DFG+A + ++ + + ++ GT +M PE
Sbjct: 132 DLKPANFLIVDGM--LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 178
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 13/177 (7%)
Query: 29 GPRIGEGAHAKVYEGKYKNQTV--AIKIVHKGETPEE---IAKKESRFAREVAMLSRVQH 83
G +G G A V + + K+ + A K + K T +++++ REV++L +QH
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED--IEREVSILKEIQH 73
Query: 84 RNLVKFIGACKEPVMVI-VTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLH 142
N++ + VI + EL++GG L +L L A F I + LH
Sbjct: 74 PNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYLH 131
Query: 143 SHGIIHRDLKPENLLLTED---LKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
S I H DLKPEN++L + IK+ DFGLA + GT ++APE+
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 188
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 94/196 (47%), Gaps = 36/196 (18%)
Query: 23 PKHLF----VGPRIGEGAHAKVYEGK--YKNQTVAIKIVHKGETPEEIAKKES---RFAR 73
P HL +G +G G ++V+ + ++ VA+K++ ++A+ S RF R
Sbjct: 24 PSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRA-----DLARDPSFYLRFRR 78
Query: 74 EVAMLSRVQHRNLVKFIGACKE-----PVMVIVTELLSGGTLRKYLLNMRP----RCLDV 124
E + + H +V + P+ IV E + G TLR + P R ++V
Sbjct: 79 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEV 138
Query: 125 CVAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLARE-----ESLT 179
D +A+ H +GIIHRD+KP N++++ +K+ DFG+AR S+T
Sbjct: 139 IA------DACQALNFSHQNGIIHRDVKPANIMISA-TNAVKVMDFGIARAIADSGNSVT 191
Query: 180 EMMTAETGTYRWMAPE 195
+ A GT ++++PE
Sbjct: 192 Q-TAAVIGTAQYLSPE 206
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 70/166 (42%), Gaps = 37/166 (22%)
Query: 128 IGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETG 187
I ++ +A+ ME L S IHRDL N+LL+E +K+ DFGLAR + + G
Sbjct: 201 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK-NVVKICDFGLAR-DIYKDPDYVRKG 258
Query: 188 TYR----WMAPE-LYSTVTLRQGE-----------------------------KKHYNHK 213
R WMAPE ++ V Q + ++
Sbjct: 259 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 318
Query: 214 NVRPSAENVPEELSIILTSCWKEDPNARPNFTQIIQMLLNYLSAIA 259
+R PE +L CW +P+ RP F+++++ L N L A A
Sbjct: 319 RMRAPDYTTPEMYQTML-DCWHGEPSQRPTFSELVEHLGNLLQANA 363
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 57/129 (44%), Gaps = 26/129 (20%)
Query: 11 DELKLD----------AKWLIDPKHLFVGPRIGEGAHAKVYEGKYKN-------QTVAIK 53
DEL LD +KW L +G +G GA +V E +TVA+K
Sbjct: 4 DELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVK 63
Query: 54 IVHKGETPEEIAKKESRFAREVAMLSRVQHR-NLVKFIGACKE---PVMVIVTELLSGGT 109
++ +G T E E+ +L + H N+V +GAC + P+MVIV E G
Sbjct: 64 MLKEGATHSE----HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV-EFCKFGN 118
Query: 110 LRKYLLNMR 118
L YL + R
Sbjct: 119 LSTYLRSKR 127
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 70/166 (42%), Gaps = 37/166 (22%)
Query: 128 IGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETG 187
I ++ +A+ ME L S IHRDL N+LL+E +K+ DFGLAR + + G
Sbjct: 203 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK-NVVKICDFGLAR-DIYKDPDYVRKG 260
Query: 188 TYR----WMAPE-LYSTVTLRQGE-----------------------------KKHYNHK 213
R WMAPE ++ V Q + ++
Sbjct: 261 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 320
Query: 214 NVRPSAENVPEELSIILTSCWKEDPNARPNFTQIIQMLLNYLSAIA 259
+R PE +L CW +P+ RP F+++++ L N L A A
Sbjct: 321 RMRAPDYTTPEMYQTML-DCWHGEPSQRPTFSELVEHLGNLLQANA 365
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 56/128 (43%), Gaps = 24/128 (18%)
Query: 11 DELKLD----------AKWLIDPKHLFVGPRIGEGAHAKVYEGKYKN-------QTVAIK 53
DEL LD +KW L +G +G GA +V E +TVA+K
Sbjct: 6 DELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVK 65
Query: 54 IVHKGETPEEIAKKESRFAREVAMLSRVQHR-NLVKFIGACKEPV--MVIVTELLSGGTL 110
++ +G T E E+ +L + H N+V +GAC +P ++++ E G L
Sbjct: 66 MLKEGATHSE----HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 121
Query: 111 RKYLLNMR 118
YL + R
Sbjct: 122 STYLRSKR 129
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 101/262 (38%), Gaps = 40/262 (15%)
Query: 32 IGEGAHAKVYEGKYK---NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+G G V +G Y+ + K E + K E E ++ ++ + +V+
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDE--LLAEANVMQQLDNPYIVR 92
Query: 89 FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
IG C+ ++V E+ G L KYL + R + I ++ M+ L +H
Sbjct: 93 MIGICEAESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEESNFVH 150
Query: 149 RDLKPENLLLTEDLKTIKLADFGLAR----EESLTEMMTAETGTYRWMAPE--------- 195
RDL N+LL K++DFGL++ +E+ + T +W APE
Sbjct: 151 RDLAARNVLLVTQ-HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 209
Query: 196 ---LYSTVTL-----RQGEKKHYNHKNVRPSA-----------ENVPEELSIILTSCWKE 236
++S L G+K + K +A P E+ ++ CW
Sbjct: 210 KSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTY 269
Query: 237 DPNARPNFTQIIQMLLNYLSAI 258
D RP F + L NY +
Sbjct: 270 DVENRPGFAAVELRLRNYYYDV 291
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 101/262 (38%), Gaps = 40/262 (15%)
Query: 32 IGEGAHAKVYEGKYK---NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+G G V +G Y+ + K E + K E E ++ ++ + +V+
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDE--LLAEANVMQQLDNPYIVR 92
Query: 89 FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
IG C+ ++V E+ G L KYL + R + I ++ M+ L +H
Sbjct: 93 MIGICEAESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEESNFVH 150
Query: 149 RDLKPENLLLTEDLKTIKLADFGLAR----EESLTEMMTAETGTYRWMAPE--------- 195
RDL N+LL K++DFGL++ +E+ + T +W APE
Sbjct: 151 RDLAARNVLLVTQ-HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 209
Query: 196 ---LYSTVTL-----RQGEKKHYNHKNVRPSA-----------ENVPEELSIILTSCWKE 236
++S L G+K + K +A P E+ ++ CW
Sbjct: 210 KSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTY 269
Query: 237 DPNARPNFTQIIQMLLNYLSAI 258
D RP F + L NY +
Sbjct: 270 DVENRPGFAAVELRLRNYYYDV 291
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 100/258 (38%), Gaps = 40/258 (15%)
Query: 32 IGEGAHAKVYEGKYK---NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+G G V +G Y+ + K E + K E E ++ ++ + +V+
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDE--LLAEANVMQQLDNPYIVR 90
Query: 89 FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
IG C+ ++V E+ G L KYL + R + I ++ M+ L +H
Sbjct: 91 MIGICEAESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEESNFVH 148
Query: 149 RDLKPENLLLTEDLKTIKLADFGLAR----EESLTEMMTAETGTYRWMAPE--------- 195
RDL N+LL K++DFGL++ +E+ + T +W APE
Sbjct: 149 RDLAARNVLLVTQ-HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 207
Query: 196 ---LYSTVTL-----RQGEKKHYNHKNVRPSA-----------ENVPEELSIILTSCWKE 236
++S L G+K + K +A P E+ ++ CW
Sbjct: 208 KSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTY 267
Query: 237 DPNARPNFTQIIQMLLNY 254
D RP F + L NY
Sbjct: 268 DVENRPGFAAVELRLRNY 285
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 83/186 (44%), Gaps = 23/186 (12%)
Query: 25 HLFVGPRIGEGAHAKVYEGKYKN--QTVAIKIVHK--------GETPEEIAKKESRFARE 74
H +G +G G A V + + K + A K + K G + EEI RE
Sbjct: 6 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIE-------RE 58
Query: 75 VAMLSRVQHRNLVKFIGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALD 133
V +L ++H N++ + +V++ EL+SGG L +L D A F
Sbjct: 59 VNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDE--ATQFLKQ 116
Query: 134 IARAMECLHSHGIIHRDLKPENLLLTED---LKTIKLADFGLAREESLTEMMTAETGTYR 190
I + LHS I H DLKPEN++L + IKL DFG+A + GT
Sbjct: 117 ILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPE 176
Query: 191 WMAPEL 196
++APE+
Sbjct: 177 FVAPEI 182
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 70/166 (42%), Gaps = 37/166 (22%)
Query: 128 IGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETG 187
I ++ +A+ ME L S IHRDL N+LL+E +K+ DFGLAR + + G
Sbjct: 196 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK-NVVKICDFGLAR-DIYKDPDYVRKG 253
Query: 188 TYR----WMAPE-LYSTVTLRQGE-----------------------------KKHYNHK 213
R WMAPE ++ V Q + ++
Sbjct: 254 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 313
Query: 214 NVRPSAENVPEELSIILTSCWKEDPNARPNFTQIIQMLLNYLSAIA 259
+R PE +L CW +P+ RP F+++++ L N L A A
Sbjct: 314 RMRAPDYTTPEMYQTML-DCWHGEPSQRPTFSELVEHLGNLLQANA 358
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 14/112 (12%)
Query: 17 AKWLIDPKHLFVGPRIGEGAHAKVYEGKYKN-------QTVAIKIVHKGETPEEIAKKES 69
+KW L +G +G GA +V E +TVA+K++ +G T E
Sbjct: 15 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE----HR 70
Query: 70 RFAREVAMLSRVQHR-NLVKFIGACKEPV--MVIVTELLSGGTLRKYLLNMR 118
E+ +L + H N+V +GAC +P ++++ E G L YL + R
Sbjct: 71 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR 122
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Query: 98 MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIHRDLKPENLL 157
++IV E L GG L + + + A I A++ LHS I HRD+KPENLL
Sbjct: 134 LLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHRDVKPENLL 193
Query: 158 LTEDL--KTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
T +KL DFG A+E + +T T ++APE+
Sbjct: 194 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 234
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 109/254 (42%), Gaps = 43/254 (16%)
Query: 32 IGEGAHAKVYEGKYKNQT------VAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G GA VY+G + + VAIK + + +P+ A KE E +++ V + +
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKE--ILDEAYVMASVDNPH 82
Query: 86 LVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
+ + +G C + ++ +L+ G L Y+ + + + + + IA+ M L
Sbjct: 83 VCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR 141
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEM-MTAETGTY--RWMAPE-LYSTVT 201
++HRDL N+L+ + +K+ DFG A+ E AE G +WMA E + +
Sbjct: 142 LVHRDLAARNVLVKTP-QHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 200
Query: 202 LRQGEKKHYNH---------------------KNVRPSAENVPE------ELSIILTSCW 234
Q + Y ++ E +P+ ++ +I+ CW
Sbjct: 201 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCW 260
Query: 235 KEDPNARPNFTQII 248
D ++RP F ++I
Sbjct: 261 MIDADSRPKFRELI 274
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 82/184 (44%), Gaps = 14/184 (7%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 18 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 79 SRVQHRNLVKFIG------ACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFAL 132
++H N++ + + +E V + L G L + + + V I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLI---Y 132
Query: 133 DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWM 192
I R ++ +HS IIHRDLKP NL + ED +K+ DFGL R + MT T +
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNED-SELKILDFGLCRHTD--DEMTGYVATRWYR 189
Query: 193 APEL 196
APE+
Sbjct: 190 APEI 193
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 83/186 (44%), Gaps = 23/186 (12%)
Query: 25 HLFVGPRIGEGAHAKVYEGKYKN--QTVAIKIVHK--------GETPEEIAKKESRFARE 74
H +G +G G A V + + K + A K + K G + EEI RE
Sbjct: 27 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIE-------RE 79
Query: 75 VAMLSRVQHRNLVKFIGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALD 133
V +L ++H N++ + +V++ EL+SGG L +L D A F
Sbjct: 80 VNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDE--ATQFLKQ 137
Query: 134 IARAMECLHSHGIIHRDLKPENLLLTED---LKTIKLADFGLAREESLTEMMTAETGTYR 190
I + LHS I H DLKPEN++L + IKL DFG+A + GT
Sbjct: 138 ILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPE 197
Query: 191 WMAPEL 196
++APE+
Sbjct: 198 FVAPEI 203
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 70/166 (42%), Gaps = 37/166 (22%)
Query: 128 IGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETG 187
I ++ +A+ ME L S IHRDL N+LL+E +K+ DFGLAR + + G
Sbjct: 194 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK-NVVKICDFGLAR-DIYKDPDYVRKG 251
Query: 188 TYR----WMAPE-LYSTVTLRQGE-----------------------------KKHYNHK 213
R WMAPE ++ V Q + ++
Sbjct: 252 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 311
Query: 214 NVRPSAENVPEELSIILTSCWKEDPNARPNFTQIIQMLLNYLSAIA 259
+R PE +L CW +P+ RP F+++++ L N L A A
Sbjct: 312 RMRAPDYTTPEMYQTML-DCWHGEPSQRPTFSELVEHLGNLLQANA 356
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 16/113 (14%)
Query: 17 AKWLIDPKHLFVGPRIGEGAHAKVYEGKYKN-------QTVAIKIVHKGETPEEIAKKES 69
+KW L +G +G GA +V E +TVA+K++ +G T E
Sbjct: 13 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE----HR 68
Query: 70 RFAREVAMLSRVQHR-NLVKFIGACKE---PVMVIVTELLSGGTLRKYLLNMR 118
E+ +L + H N+V +GAC + P+MVIV E G L YL + R
Sbjct: 69 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKR 120
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 100/258 (38%), Gaps = 40/258 (15%)
Query: 32 IGEGAHAKVYEGKYK---NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+G G V +G Y+ + K E + K E E ++ ++ + +V+
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDE--LLAEANVMQQLDNPYIVR 76
Query: 89 FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
IG C+ ++V E+ G L KYL + R + I ++ M+ L +H
Sbjct: 77 MIGICEAESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEESNFVH 134
Query: 149 RDLKPENLLLTEDLKTIKLADFGLAR----EESLTEMMTAETGTYRWMAPE--------- 195
RDL N+LL K++DFGL++ +E+ + T +W APE
Sbjct: 135 RDLAARNVLLVTQ-HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 193
Query: 196 ---LYSTVTL-----RQGEKKHYNHKNVRPSA-----------ENVPEELSIILTSCWKE 236
++S L G+K + K +A P E+ ++ CW
Sbjct: 194 KSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTY 253
Query: 237 DPNARPNFTQIIQMLLNY 254
D RP F + L NY
Sbjct: 254 DVENRPGFAAVELRLRNY 271
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 13/177 (7%)
Query: 29 GPRIGEGAHAKVYEGKYKNQTV--AIKIVHKGETPEE---IAKKESRFAREVAMLSRVQH 83
G +G G A V + + K+ + A K + K T +++++ REV++L +QH
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED--IEREVSILKEIQH 73
Query: 84 RNLVKFIGACKEPVMVI-VTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLH 142
N++ + VI + EL++GG L +L L A F I + LH
Sbjct: 74 PNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYLH 131
Query: 143 SHGIIHRDLKPENLLLTED---LKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
S I H DLKPEN++L + IK+ DFGLA + GT ++APE+
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEI 188
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 94/187 (50%), Gaps = 18/187 (9%)
Query: 32 IGEGAHAKVY-----EGKYKNQTVAIKIVHKGETPEEIAKKE-SRFAREVAMLSRVQHRN 85
+G GA+ KV+ G + A+K++ K ++ E +R R+V R Q
Sbjct: 62 LGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIR-QSPF 120
Query: 86 LVKFIGACK-EPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
LV A + E + ++ + ++GG L +L + R R + V I + +I A+E LH
Sbjct: 121 LVTLHYAFQTETKLHLILDYINGGELFTHL-SQRERFTEHEVQI-YVGEIVLALEHLHKL 178
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLARE--ESLTEMMTAETGTYRWMAPELYSTVTL 202
GII+RD+K EN+LL + + L DFGL++E TE GT +MAP++ +
Sbjct: 179 GIIYRDIKLENILLDSNGHVV-LTDFGLSKEFVADETERAYDFCGTIEYMAPDI-----V 232
Query: 203 RQGEKKH 209
R G+ H
Sbjct: 233 RGGDSGH 239
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 109/254 (42%), Gaps = 43/254 (16%)
Query: 32 IGEGAHAKVYEGKYKNQT------VAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G GA VY+G + + VAIK + + +P+ A KE E +++ V + +
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKE--ILDEAYVMASVDNPH 80
Query: 86 LVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
+ + +G C + ++ +L+ G L Y+ + + + + + IA+ M L
Sbjct: 81 VCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR 139
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEM-MTAETGTY--RWMAPE-LYSTVT 201
++HRDL N+L+ + +K+ DFG A+ E AE G +WMA E + +
Sbjct: 140 LVHRDLAARNVLVKTP-QHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 198
Query: 202 LRQGEKKHYNH---------------------KNVRPSAENVPE------ELSIILTSCW 234
Q + Y ++ E +P+ ++ +I+ CW
Sbjct: 199 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCW 258
Query: 235 KEDPNARPNFTQII 248
D ++RP F ++I
Sbjct: 259 MIDADSRPKFRELI 272
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 109/254 (42%), Gaps = 43/254 (16%)
Query: 32 IGEGAHAKVYEGKYKNQT------VAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+ GA VY+G + + VAIK + + +P+ A KE E +++ V + +
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKE--ILDEAYVMASVDNPH 85
Query: 86 LVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
+ + +G C + ++ +L+ G L Y+ + + + + + IA+ M L
Sbjct: 86 VCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR 144
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEM-MTAETGTY--RWMAPE-LYSTVT 201
++HRDL N+L+ + +K+ DFGLA+ E AE G +WMA E + +
Sbjct: 145 LVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 203
Query: 202 LRQGEKKHYNH---------------------KNVRPSAENVPE------ELSIILTSCW 234
Q + Y ++ E +P+ ++ +I+ CW
Sbjct: 204 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCW 263
Query: 235 KEDPNARPNFTQII 248
D ++RP F ++I
Sbjct: 264 MIDADSRPKFRELI 277
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 100/258 (38%), Gaps = 40/258 (15%)
Query: 32 IGEGAHAKVYEGKYK---NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+G G V +G Y+ + K E + K E E ++ ++ + +V+
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDE--LLAEANVMQQLDNPYIVR 70
Query: 89 FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
IG C+ ++V E+ G L KYL + R + I ++ M+ L +H
Sbjct: 71 MIGICEAESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEESNFVH 128
Query: 149 RDLKPENLLLTEDLKTIKLADFGLAR----EESLTEMMTAETGTYRWMAPE--------- 195
RDL N+LL K++DFGL++ +E+ + T +W APE
Sbjct: 129 RDLAARNVLLVTQ-HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 187
Query: 196 ---LYSTVTL-----RQGEKKHYNHKNVRPSA-----------ENVPEELSIILTSCWKE 236
++S L G+K + K +A P E+ ++ CW
Sbjct: 188 KSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTY 247
Query: 237 DPNARPNFTQIIQMLLNY 254
D RP F + L NY
Sbjct: 248 DVENRPGFAAVELRLRNY 265
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 100/258 (38%), Gaps = 40/258 (15%)
Query: 32 IGEGAHAKVYEGKYK---NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+G G V +G Y+ + K E + K E E ++ ++ + +V+
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDE--LLAEANVMQQLDNPYIVR 82
Query: 89 FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
IG C+ ++V E+ G L KYL + R + I ++ M+ L +H
Sbjct: 83 MIGICEAESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEESNFVH 140
Query: 149 RDLKPENLLLTEDLKTIKLADFGLAR----EESLTEMMTAETGTYRWMAPE--------- 195
RDL N+LL K++DFGL++ +E+ + T +W APE
Sbjct: 141 RDLAARNVLLVTQ-HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 199
Query: 196 ---LYSTVTL-----RQGEKKHYNHKNVRPSA-----------ENVPEELSIILTSCWKE 236
++S L G+K + K +A P E+ ++ CW
Sbjct: 200 KSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTY 259
Query: 237 DPNARPNFTQIIQMLLNY 254
D RP F + L NY
Sbjct: 260 DVENRPGFAAVELRLRNY 277
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 100/258 (38%), Gaps = 40/258 (15%)
Query: 32 IGEGAHAKVYEGKYK---NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+G G V +G Y+ + K E + K E E ++ ++ + +V+
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDE--LLAEANVMQQLDNPYIVR 72
Query: 89 FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
IG C+ ++V E+ G L KYL + R + I ++ M+ L +H
Sbjct: 73 MIGICEAESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEESNFVH 130
Query: 149 RDLKPENLLLTEDLKTIKLADFGLAR----EESLTEMMTAETGTYRWMAPE--------- 195
RDL N+LL K++DFGL++ +E+ + T +W APE
Sbjct: 131 RDLAARNVLLVTQ-HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 189
Query: 196 ---LYSTVTL-----RQGEKKHYNHKNVRPSA-----------ENVPEELSIILTSCWKE 236
++S L G+K + K +A P E+ ++ CW
Sbjct: 190 KSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTY 249
Query: 237 DPNARPNFTQIIQMLLNY 254
D RP F + L NY
Sbjct: 250 DVENRPGFAAVELRLRNY 267
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 100/258 (38%), Gaps = 40/258 (15%)
Query: 32 IGEGAHAKVYEGKYK---NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+G G V +G Y+ + K E + K E E ++ ++ + +V+
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDE--LLAEANVMQQLDNPYIVR 76
Query: 89 FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
IG C+ ++V E+ G L KYL + R + I ++ M+ L +H
Sbjct: 77 MIGICEAESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEESNFVH 134
Query: 149 RDLKPENLLLTEDLKTIKLADFGLAR----EESLTEMMTAETGTYRWMAPE--------- 195
RDL N+LL K++DFGL++ +E+ + T +W APE
Sbjct: 135 RDLAARNVLLVTQ-HYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFSS 193
Query: 196 ---LYSTVTL-----RQGEKKHYNHKNVRPSA-----------ENVPEELSIILTSCWKE 236
++S L G+K + K +A P E+ ++ CW
Sbjct: 194 KSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTY 253
Query: 237 DPNARPNFTQIIQMLLNY 254
D RP F + L NY
Sbjct: 254 DVENRPGFAAVELRLRNY 271
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 78/161 (48%), Gaps = 23/161 (14%)
Query: 47 NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKFIGA-CKEPVMVIVTELL 105
Q A KI++ T + A+ + RE + ++H N+V+ + +E +V +L+
Sbjct: 29 GQEYAAKIIN---TKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLV 85
Query: 106 SGGTL------RKYLLNMRP-RCLDVCVAIGFALDIARAMECLHSHGIIHRDLKPENLLL 158
+GG L R+Y C+ I ++ H +GI+HRDLKPENLLL
Sbjct: 86 TGGELFEDIVAREYYSEADASHCIQ---------QILESVNHCHLNGIVHRDLKPENLLL 136
Query: 159 TEDLK--TIKLADFGLARE-ESLTEMMTAETGTYRWMAPEL 196
K +KLADFGLA E + + GT +++PE+
Sbjct: 137 ASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEV 177
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 85/187 (45%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 18 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------LNNIVKCQKLTDDHVQF 129
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED + +K+ D+GLAR + MT T
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDYGLARHTD--DEMTGYVATR 186
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 187 WYRAPEI 193
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 96/256 (37%), Gaps = 47/256 (18%)
Query: 98 MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIHRDLKPENLL 157
++IV E L GG L + + + A I A++ LHS I HRD+KPENLL
Sbjct: 90 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 149
Query: 158 LTEDL--KTIKLADFGLAREESLTEMMTAETGTYRWMAPEL------------------- 196
T +KL DFG A+E + +T T ++APE+
Sbjct: 150 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 209
Query: 197 ----------YST----------VTLRQGEKKHYNHKNVRPSAENVPEELSIILTSCWKE 236
YS +R G+ + N P V EE+ +++ + K
Sbjct: 210 YILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN-----PEWSEVSEEVKMLIRNLLKT 264
Query: 237 DPNARPNFTQIIQMLLNYLSAIAPPEPMIPHRIFNSENTILPP-ESPGTSSLMTVRDDIG 295
+P R T+ + S P P+ R+ + + TS+L T+R D
Sbjct: 265 EPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKERWEDVKEEMTSALATMRVDYE 324
Query: 296 ETPKAKMGDKPKSLFF 311
+ K+ D L
Sbjct: 325 QIKIKKIEDASNPLLL 340
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 86/171 (50%), Gaps = 9/171 (5%)
Query: 32 IGEGAHAKVYE--GKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+G+G AK +E + A KIV K + + + + E+++ + H+++V F
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK--PHQREKMSMEISIHRSLAHQHVVGF 104
Query: 90 IGACKEPVMV-IVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
G ++ V +V EL +L + L+ R + L A + I + LH + +IH
Sbjct: 105 HGFFEDNDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 162
Query: 149 RDLKPENLLLTEDLKTIKLADFGLA-REESLTEMMTAETGTYRWMAPELYS 198
RDLK NL L EDL+ +K+ DFGLA + E E GT ++APE+ S
Sbjct: 163 RDLKLGNLFLNEDLE-VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLS 212
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 80/171 (46%), Gaps = 13/171 (7%)
Query: 31 RIGEGAHAKVYEG-KYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN--LV 87
+IG G +KV++ K Q AIK V+ E + + E+A L+++Q + ++
Sbjct: 35 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTL---DSYRNEIAYLNKLQQHSDKII 91
Query: 88 KFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGII 147
+ + + L +L + + +D + ++ A+ +H HGI+
Sbjct: 92 RLYDYEITDQYIYMVMECGNIDLNSWL--KKKKSIDPWERKSYWKNMLEAVHTIHQHGIV 149
Query: 148 HRDLKPENLLLTEDLKTIKLADFGLARE---ESLTEMMTAETGTYRWMAPE 195
H DLKP N L+ + + +KL DFG+A + + + ++ GT +M PE
Sbjct: 150 HSDLKPANFLIVDGM--LKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPE 198
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 109/254 (42%), Gaps = 43/254 (16%)
Query: 32 IGEGAHAKVYEGKYKNQT------VAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G GA VY+G + + VAIK + + +P+ A KE E +++ V + +
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKE--ILDEAYVMASVDNPH 80
Query: 86 LVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
+ + +G C + ++ +L+ G L Y+ + + + + + IA+ M L
Sbjct: 81 VCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR 139
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEM-MTAETGTY--RWMAPE-LYSTVT 201
++HRDL N+L+ + +K+ DFG A+ E AE G +WMA E + +
Sbjct: 140 LVHRDLAARNVLVKTP-QHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 198
Query: 202 LRQGEKKHYNH---------------------KNVRPSAENVPE------ELSIILTSCW 234
Q + Y ++ E +P+ ++ +I+ CW
Sbjct: 199 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCW 258
Query: 235 KEDPNARPNFTQII 248
D ++RP F ++I
Sbjct: 259 MIDADSRPKFRELI 272
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 86/171 (50%), Gaps = 9/171 (5%)
Query: 32 IGEGAHAKVYE--GKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+G+G AK +E + A KIV K + + + + E+++ + H+++V F
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK--PHQREKMSMEISIHRSLAHQHVVGF 82
Query: 90 IGACKEPVMV-IVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
G ++ V +V EL +L + L+ R + L A + I + LH + +IH
Sbjct: 83 HGFFEDNDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 140
Query: 149 RDLKPENLLLTEDLKTIKLADFGLA-REESLTEMMTAETGTYRWMAPELYS 198
RDLK NL L EDL+ +K+ DFGLA + E E GT ++APE+ S
Sbjct: 141 RDLKLGNLFLNEDLE-VKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLS 190
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 86/171 (50%), Gaps = 9/171 (5%)
Query: 32 IGEGAHAKVYE--GKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+G+G AK +E + A KIV K + + + + E+++ + H+++V F
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK--PHQREKMSMEISIHRSLAHQHVVGF 82
Query: 90 IGACKEPVMV-IVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
G ++ V +V EL +L + L+ R + L A + I + LH + +IH
Sbjct: 83 HGFFEDNDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 140
Query: 149 RDLKPENLLLTEDLKTIKLADFGLA-REESLTEMMTAETGTYRWMAPELYS 198
RDLK NL L EDL+ +K+ DFGLA + E E GT ++APE+ S
Sbjct: 141 RDLKLGNLFLNEDLE-VKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLS 190
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 92/188 (48%), Gaps = 35/188 (18%)
Query: 32 IGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRV-QHRNLVK 88
IG G++++ +K N A+K++ K +K++ + E+ +L R QH N++
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDK-------SKRDP--SEEIEILLRYGQHPNIIT 85
Query: 89 FIGACKEPVMV-IVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGII 147
+ V +VTEL+ GG L +L R + A I + +E LHS G++
Sbjct: 86 LKDVYDDGKHVYLVTELMRGGELLDKIL--RQKFFSEREASFVLHTIGKTVEYLHSQGVV 143
Query: 148 HRDLKPENLLLTEDL---KTIKLADFGLAREESLTEMMTAETG-------TYRWMAPELY 197
HRDLKP N+L ++ + +++ DFG A++ + AE G T ++APE
Sbjct: 144 HRDLKPSNILYVDESGNPECLRICDFGFAKQ------LRAENGLLMTPCYTANFVAPE-- 195
Query: 198 STVTLRQG 205
V RQG
Sbjct: 196 --VLKRQG 201
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 96/256 (37%), Gaps = 47/256 (18%)
Query: 98 MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIHRDLKPENLL 157
++IV E L GG L + + + A I A++ LHS I HRD+KPENLL
Sbjct: 134 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 193
Query: 158 LTEDL--KTIKLADFGLAREESLTEMMTAETGTYRWMAPEL------------------- 196
T +KL DFG A+E + +T T ++APE+
Sbjct: 194 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 253
Query: 197 ----------YST----------VTLRQGEKKHYNHKNVRPSAENVPEELSIILTSCWKE 236
YS +R G+ + N P V EE+ +++ + K
Sbjct: 254 YILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN-----PEWSEVSEEVKMLIRNLLKT 308
Query: 237 DPNARPNFTQIIQMLLNYLSAIAPPEPMIPHRIFNSENTILPP-ESPGTSSLMTVRDDIG 295
+P R T+ + S P P+ R+ + + TS+L T+R D
Sbjct: 309 EPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKERWEDVKEEMTSALATMRVDYE 368
Query: 296 ETPKAKMGDKPKSLFF 311
+ K+ D L
Sbjct: 369 QIKIKKIEDASNPLLL 384
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 86/171 (50%), Gaps = 9/171 (5%)
Query: 32 IGEGAHAKVYE--GKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+G+G AK +E + A KIV K + + + + E+++ + H+++V F
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK--PHQREKMSMEISIHRSLAHQHVVGF 106
Query: 90 IGACKEPVMV-IVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
G ++ V +V EL +L + L+ R + L A + I + LH + +IH
Sbjct: 107 HGFFEDNDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 164
Query: 149 RDLKPENLLLTEDLKTIKLADFGLA-REESLTEMMTAETGTYRWMAPELYS 198
RDLK NL L EDL+ +K+ DFGLA + E E GT ++APE+ S
Sbjct: 165 RDLKLGNLFLNEDLE-VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLS 214
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 96/256 (37%), Gaps = 47/256 (18%)
Query: 98 MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIHRDLKPENLL 157
++IV E L GG L + + + A I A++ LHS I HRD+KPENLL
Sbjct: 140 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 199
Query: 158 LTEDL--KTIKLADFGLAREESLTEMMTAETGTYRWMAPEL------------------- 196
T +KL DFG A+E + +T T ++APE+
Sbjct: 200 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 259
Query: 197 ----------YST----------VTLRQGEKKHYNHKNVRPSAENVPEELSIILTSCWKE 236
YS +R G+ + N P V EE+ +++ + K
Sbjct: 260 YILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN-----PEWSEVSEEVKMLIRNLLKT 314
Query: 237 DPNARPNFTQIIQMLLNYLSAIAPPEPMIPHRIFNSENTILPP-ESPGTSSLMTVRDDIG 295
+P R T+ + S P P+ R+ + + TS+L T+R D
Sbjct: 315 EPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKERWEDVKEEMTSALATMRVDYE 374
Query: 296 ETPKAKMGDKPKSLFF 311
+ K+ D L
Sbjct: 375 QIKIKKIEDASNPLLL 390
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 78/161 (48%), Gaps = 23/161 (14%)
Query: 47 NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKFIGA-CKEPVMVIVTELL 105
Q A KI++ T + A+ + RE + ++H N+V+ + +E +V +L+
Sbjct: 29 GQEYAAKIIN---TKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLV 85
Query: 106 SGGTL------RKYLLNMRP-RCLDVCVAIGFALDIARAMECLHSHGIIHRDLKPENLLL 158
+GG L R+Y C+ I ++ H +GI+HRDLKPENLLL
Sbjct: 86 TGGELFEDIVAREYYSEADASHCIQ---------QILESVNHCHLNGIVHRDLKPENLLL 136
Query: 159 TEDLK--TIKLADFGLARE-ESLTEMMTAETGTYRWMAPEL 196
K +KLADFGLA E + + GT +++PE+
Sbjct: 137 ASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEV 177
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 86/171 (50%), Gaps = 9/171 (5%)
Query: 32 IGEGAHAKVYE--GKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+G+G AK +E + A KIV K + + + + E+++ + H+++V F
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK--PHQREKMSMEISIHRSLAHQHVVGF 86
Query: 90 IGACKEPVMV-IVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
G ++ V +V EL +L + L+ R + L A + I + LH + +IH
Sbjct: 87 HGFFEDNDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 144
Query: 149 RDLKPENLLLTEDLKTIKLADFGLA-REESLTEMMTAETGTYRWMAPELYS 198
RDLK NL L EDL+ +K+ DFGLA + E E GT ++APE+ S
Sbjct: 145 RDLKLGNLFLNEDLE-VKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLS 194
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 95/187 (50%), Gaps = 21/187 (11%)
Query: 32 IGEGAHAKVYEGKYKN--QTVAIKIVHKGETPEEIAKKESRF-AREVAMLSRVQHRNLVK 88
IG GA +V ++K+ + A+K++ K E I + +S F E +++ +V+
Sbjct: 77 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEM---IKRSDSAFFWEERDIMAFANSPWVVQ 133
Query: 89 FIGACKEP-VMVIVTELLSGGTLRKYLLNMRPRCLDV--CVAIGFALDIARAMECLHSHG 145
A ++ + +V E + GG L + N DV A + ++ A++ +HS G
Sbjct: 134 LFYAFQDDRYLYMVMEYMPGGDLVNLMSN-----YDVPEKWARFYTAEVVLALDAIHSMG 188
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAET--GTYRWMAPELYSTVTLR 203
IHRD+KP+N+LL + +KLADFG + + M+ +T GT +++PE+ +
Sbjct: 189 FIHRDVKPDNMLLDKS-GHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKS---- 243
Query: 204 QGEKKHY 210
QG +Y
Sbjct: 244 QGGDGYY 250
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 83/200 (41%), Gaps = 35/200 (17%)
Query: 32 IGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKFI- 90
IG G + VY+G + VA+K+ I +K + + ++H N+ +FI
Sbjct: 21 IGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEK------NIYRVPLMEHDNIARFIV 74
Query: 91 -----GACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH- 144
A ++V E G+L KYL + C A + R + LH+
Sbjct: 75 GDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSC---RLAHSVTRGLAYLHTEL 131
Query: 145 --------GIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMM---------TAETG 187
I HRDL N+L+ D T ++DFGL+ + ++ +E G
Sbjct: 132 PRGDHYKPAISHRDLNSRNVLVKND-GTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVG 190
Query: 188 TYRWMAPE-LYSTVTLRQGE 206
T R+MAPE L V LR E
Sbjct: 191 TIRYMAPEVLEGAVNLRDXE 210
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 20/143 (13%)
Query: 65 AKKESRFAREVAMLSRVQHRNLVKFIGA-CKEPVMVIVTELLSGGTL------RKYLLNM 117
A+ + RE + ++H N+V+ + +E +V +L++GG L R+Y
Sbjct: 44 ARDHQKLEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEA 103
Query: 118 RP-RCLDVCVAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLK--TIKLADFGLAR 174
C+ I A+ H G++HRDLKPENLLL K +KLADFGLA
Sbjct: 104 DASHCIQ---------QILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAI 154
Query: 175 E-ESLTEMMTAETGTYRWMAPEL 196
E + + GT +++PE+
Sbjct: 155 EVQGDQQAWFGFAGTPGYLSPEV 177
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 117/297 (39%), Gaps = 65/297 (21%)
Query: 20 LIDPKHLFVGPRIGEG--AHAKVYEGKYKNQTVAIK--IVHKGETPEEIAKKESRFAREV 75
+ID KH ++GEG ++ + EG + A+K + H+ + EE RE
Sbjct: 25 IIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQ-------REA 77
Query: 76 AMLSRVQHRNLVKFIGAC-----KEPVMVIVTELLSGGTLRKYLLNMRPRC--LDVCVAI 128
M H N+++ + C + ++ GTL + ++ + L +
Sbjct: 78 DMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQIL 137
Query: 129 GFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGL----------AREESL 178
L I R +E +H+ G HRDLKP N+LL ++ + + L D G +R+
Sbjct: 138 WLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPV-LMDLGSMNQACIHVEGSRQALT 196
Query: 179 TEMMTAETGTYRWMAPELYST------------------------------VTLRQGEKK 208
+ A+ T + APEL+S + ++G+
Sbjct: 197 LQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSV 256
Query: 209 HYNHKNVR--PSAENVPEELSIILTSCWKEDPNARPNFTQIIQMLLNYLSAIAPPEP 263
+N P + L +L S DP+ RP+ I +LL+ L A+ PP P
Sbjct: 257 ALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPH----IPLLLSQLEALQPPAP 309
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 80/187 (42%), Gaps = 28/187 (14%)
Query: 32 IGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+GEGA+ V +K + VAIK + + P R RE+ +L +H N++
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFAL----RTLREIKILKHFKHENIITI 74
Query: 90 IGACKEPV------MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHS 143
+ + I+ EL+ R M L F RA++ LH
Sbjct: 75 FNIQRPDSFENFNEVYIIQELMQTDLHRVISTQM----LSDDHIQYFIYQTLRAVKVLHG 130
Query: 144 HGIIHRDLKPENLLLTEDLKTIKLADFGLAR--EESLTEM---------MTAETGTYRWM 192
+IHRDLKP NLL+ + +K+ DFGLAR +ES + MT T +
Sbjct: 131 SNVIHRDLKPSNLLINSNCD-LKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYR 189
Query: 193 APELYST 199
APE+ T
Sbjct: 190 APEVMLT 196
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 84/174 (48%), Gaps = 19/174 (10%)
Query: 32 IGEGAHAKV--YEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+G+G KV K + A+KI+ K E+ + A V SRV F
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRK-----EVIIAKDEVAHTVTE-SRVLQNTRHPF 66
Query: 90 IGACKEPV-----MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
+ A K + V E +GG L +L R R A + +I A+E LHS
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAET--GTYRWMAPEL 196
+++RD+K ENL+L +D IK+ DFGL + E +++ T +T GT ++APE+
Sbjct: 125 DVVYRDIKLENLMLDKD-GHIKITDFGLCK-EGISDGATMKTFCGTPEYLAPEV 176
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 95/187 (50%), Gaps = 21/187 (11%)
Query: 32 IGEGAHAKVYEGKYKN--QTVAIKIVHKGETPEEIAKKESRF-AREVAMLSRVQHRNLVK 88
IG GA +V ++K+ + A+K++ K E I + +S F E +++ +V+
Sbjct: 82 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEM---IKRSDSAFFWEERDIMAFANSPWVVQ 138
Query: 89 FIGACKEP-VMVIVTELLSGGTLRKYLLNMRPRCLDV--CVAIGFALDIARAMECLHSHG 145
A ++ + +V E + GG L + N DV A + ++ A++ +HS G
Sbjct: 139 LFYAFQDDRYLYMVMEYMPGGDLVNLMSN-----YDVPEKWARFYTAEVVLALDAIHSMG 193
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAET--GTYRWMAPELYSTVTLR 203
IHRD+KP+N+LL + +KLADFG + + M+ +T GT +++PE+ +
Sbjct: 194 FIHRDVKPDNMLLDKS-GHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKS---- 248
Query: 204 QGEKKHY 210
QG +Y
Sbjct: 249 QGGDGYY 255
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Query: 98 MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIHRDLKPENLL 157
++IV E L GG L + + + A I A++ LHS I HRD+KPENLL
Sbjct: 96 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 155
Query: 158 LTEDL--KTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
T +KL DFG A+E + +T T ++APE+
Sbjct: 156 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 196
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 86/171 (50%), Gaps = 9/171 (5%)
Query: 32 IGEGAHAKVYE--GKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+G+G AK +E + A KIV K + + + + E+++ + H+++V F
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK--PHQREKMSMEISIHRSLAHQHVVGF 80
Query: 90 IGACKEPVMV-IVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
G ++ V +V EL +L + L+ R + L A + I + LH + +IH
Sbjct: 81 HGFFEDNDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 138
Query: 149 RDLKPENLLLTEDLKTIKLADFGLA-REESLTEMMTAETGTYRWMAPELYS 198
RDLK NL L EDL+ +K+ DFGLA + E E GT ++APE+ S
Sbjct: 139 RDLKLGNLFLNEDLE-VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLS 188
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 92/188 (48%), Gaps = 35/188 (18%)
Query: 32 IGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRV-QHRNLVK 88
IG G++++ +K N A+K++ K +K++ + E+ +L R QH N++
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDK-------SKRDP--SEEIEILLRYGQHPNIIT 85
Query: 89 FIGACKEPVMV-IVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGII 147
+ V +VTEL+ GG L +L R + A I + +E LHS G++
Sbjct: 86 LKDVYDDGKHVYLVTELMRGGELLDKIL--RQKFFSEREASFVLHTIGKTVEYLHSQGVV 143
Query: 148 HRDLKPENLLLTEDL---KTIKLADFGLAREESLTEMMTAETG-------TYRWMAPELY 197
HRDLKP N+L ++ + +++ DFG A++ + AE G T ++APE
Sbjct: 144 HRDLKPSNILYVDESGNPECLRICDFGFAKQ------LRAENGLLMTPCYTANFVAPE-- 195
Query: 198 STVTLRQG 205
V RQG
Sbjct: 196 --VLKRQG 201
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Query: 98 MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIHRDLKPENLL 157
++IV E L GG L + + + A I A++ LHS I HRD+KPENLL
Sbjct: 94 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 153
Query: 158 LTEDL--KTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
T +KL DFG A+E + +T T ++APE+
Sbjct: 154 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 194
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 21/206 (10%)
Query: 1 MESRSRFYLADELKLDAKWLIDPKHLFVGPRIGEGAHAKVYE--GKYKNQTVAIKIVHKG 58
M+ +F++ L++ +ID + +G G + KV + K + A+K++
Sbjct: 1 MQQFPQFHVKSGLQIKKNAIID-DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ-- 57
Query: 59 ETPEEIAKKESRFAREVAMLSRV-QHRNLVKFIGACKE-----PVMVIVTELLSGGTLRK 112
+ P + REV + R Q ++V+ + + ++IV E L GG L
Sbjct: 58 DCP--------KARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFS 109
Query: 113 YLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDL--KTIKLADF 170
+ + + A I A++ LHS I HRD+KPENLL T +KL DF
Sbjct: 110 RIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDF 169
Query: 171 GLAREESLTEMMTAETGTYRWMAPEL 196
G A+E + +T T ++APE+
Sbjct: 170 GFAKETTSHNSLTTPCYTPYYVAPEV 195
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 88/181 (48%), Gaps = 23/181 (12%)
Query: 28 VGPRIGEGAHAKVYEGK--YKNQTVAIKIV-HKGETPEEIAKKESRFAREVAMLSRVQHR 84
VG +IG G ++ GK Y N+ VAIK+ K P+ E RF +++ +
Sbjct: 13 VGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQ--LHLEYRFYKQLGSGDGIPQ- 69
Query: 85 NLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
V + G C + +V ELL G +L L ++ R + + A+ + ME +HS
Sbjct: 70 --VYYFGPCGK-YNAMVLELL-GPSLED-LFDLCDRTFSLKTVLMIAIQLISRMEYVHSK 124
Query: 145 GIIHRDLKPENLLL----TEDLKTIKLADFGLARE----ESLTEMMTAE----TGTYRWM 192
+I+RD+KPEN L+ + + I + DF LA+E E+ + E TGT R+M
Sbjct: 125 NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYM 184
Query: 193 A 193
+
Sbjct: 185 S 185
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 96/190 (50%), Gaps = 21/190 (11%)
Query: 32 IGEGAHAKVYEGKYKN--QTVAIKIVHKGETPEEIAKKESRF-AREVAMLSRVQHRNLVK 88
IG GA +V ++K+ + A+K++ K E I + +S F E +++ +V+
Sbjct: 82 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEM---IKRSDSAFFWEERDIMAFANSPWVVQ 138
Query: 89 FIGACKEP-VMVIVTELLSGGTLRKYLLNMRPRCLDV--CVAIGFALDIARAMECLHSHG 145
A ++ + +V E + GG L + N DV A + ++ A++ +HS G
Sbjct: 139 LFYAFQDDRYLYMVMEYMPGGDLVNLMSN-----YDVPEKWARFYTAEVVLALDAIHSMG 193
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAET--GTYRWMAPELYSTVTLR 203
IHRD+KP+N+LL + +KLADFG + + M+ +T GT +++PE+ +
Sbjct: 194 FIHRDVKPDNMLLDKS-GHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKS---- 248
Query: 204 QGEKKHYNHK 213
QG +Y +
Sbjct: 249 QGGDGYYGRE 258
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Query: 98 MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIHRDLKPENLL 157
++IV E L GG L + + + A I A++ LHS I HRD+KPENLL
Sbjct: 90 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 149
Query: 158 LTEDL--KTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
T +KL DFG A+E + +T T ++APE+
Sbjct: 150 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 190
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 84/174 (48%), Gaps = 19/174 (10%)
Query: 32 IGEGAHAKV--YEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+G+G KV K + A+KI+ K E+ + A V SRV F
Sbjct: 16 LGKGTFGKVILVREKATGRYYAMKILRK-----EVIIAKDEVAHTVTE-SRVLQNTRHPF 69
Query: 90 IGACKEPV-----MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
+ A K + V E +GG L +L R R A + +I A+E LHS
Sbjct: 70 LTALKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAEIVSALEYLHSR 127
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAET--GTYRWMAPEL 196
+++RD+K ENL+L +D IK+ DFGL + E +++ T +T GT ++APE+
Sbjct: 128 DVVYRDIKLENLMLDKD-GHIKITDFGLCK-EGISDGATMKTFCGTPEYLAPEV 179
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 79/169 (46%), Gaps = 9/169 (5%)
Query: 31 RIGEGAHAKVYEG-KYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+IG G +KV++ K Q AIK V+ E + + E+A L+++Q +
Sbjct: 63 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTL---DSYRNEIAYLNKLQQHSDKII 119
Query: 90 IGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIHR 149
E + ++ G + + + +D + ++ A+ +H HGI+H
Sbjct: 120 RLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHS 179
Query: 150 DLKPENLLLTEDLKTIKLADFGLARE---ESLTEMMTAETGTYRWMAPE 195
DLKP N L+ + + +KL DFG+A + ++ + + ++ G +M PE
Sbjct: 180 DLKPANFLIVDGM--LKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPE 226
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 88/181 (48%), Gaps = 23/181 (12%)
Query: 28 VGPRIGEGAHAKVYEGK--YKNQTVAIKIV-HKGETPEEIAKKESRFAREVAMLSRVQHR 84
VG +IG G ++ GK Y N+ VAIK+ K P+ E RF +++ +
Sbjct: 34 VGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQ--LHLEYRFYKQLGSGDGIPQ- 90
Query: 85 NLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
V + G C + +V ELL G +L L ++ R + + A+ + ME +HS
Sbjct: 91 --VYYFGPCGK-YNAMVLELL-GPSLED-LFDLCDRTFSLKTVLMIAIQLISRMEYVHSK 145
Query: 145 GIIHRDLKPENLLL----TEDLKTIKLADFGLARE----ESLTEMMTAE----TGTYRWM 192
+I+RD+KPEN L+ + + I + DF LA+E E+ + E TGT R+M
Sbjct: 146 NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYM 205
Query: 193 A 193
+
Sbjct: 206 S 206
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Query: 98 MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIHRDLKPENLL 157
++IV E L GG L + + + A I A++ LHS I HRD+KPENLL
Sbjct: 104 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 163
Query: 158 LTEDL--KTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
T +KL DFG A+E + +T T ++APE+
Sbjct: 164 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 204
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Query: 98 MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIHRDLKPENLL 157
++IV E L GG L + + + A I A++ LHS I HRD+KPENLL
Sbjct: 89 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 148
Query: 158 LTEDL--KTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
T +KL DFG A+E + +T T ++APE+
Sbjct: 149 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 189
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 80/187 (42%), Gaps = 28/187 (14%)
Query: 32 IGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+GEGA+ V +K + VAIK + + P R RE+ +L +H N++
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFAL----RTLREIKILKHFKHENIITI 74
Query: 90 IGACKEPV------MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHS 143
+ + I+ EL+ R M L F RA++ LH
Sbjct: 75 FNIQRPDSFENFNEVYIIQELMQTDLHRVISTQM----LSDDHIQYFIYQTLRAVKVLHG 130
Query: 144 HGIIHRDLKPENLLLTEDLKTIKLADFGLAR--EESLTEM---------MTAETGTYRWM 192
+IHRDLKP NLL+ + +K+ DFGLAR +ES + MT T +
Sbjct: 131 SNVIHRDLKPSNLLINSNCD-LKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYR 189
Query: 193 APELYST 199
APE+ T
Sbjct: 190 APEVMLT 196
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 84/174 (48%), Gaps = 19/174 (10%)
Query: 32 IGEGAHAKV--YEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+G+G KV K + A+KI+ K E+ + A V SRV F
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRK-----EVIIAKDEVAHTVTE-SRVLQNTRHPF 66
Query: 90 IGACKEPV-----MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
+ A K + V E +GG L +L R R A + +I A+E LHS
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAET--GTYRWMAPEL 196
+++RD+K ENL+L +D IK+ DFGL + E +++ T +T GT ++APE+
Sbjct: 125 DVVYRDIKLENLMLDKD-GHIKITDFGLCK-EGISDGATMKTFCGTPEYLAPEV 176
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 88/193 (45%), Gaps = 32/193 (16%)
Query: 24 KHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRV-- 81
K + + +IG+G + +V+ GK++ + VA+K+ E E+ + RE + V
Sbjct: 37 KQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTE--------EASWFRETEIYQTVLM 88
Query: 82 QHRNLVKFI-----GACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIAR 136
+H N++ FI G + ++T+ G+L YL + LD + A
Sbjct: 89 RHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYL---KSTTLDAKSMLKLAYSSVS 145
Query: 137 AMECLHSH--------GIIHRDLKPENLLLTEDLKTIKLADFGLARE--ESLTEMM---T 183
+ LH+ I HRDLK +N+L+ ++ T +AD GLA + E+
Sbjct: 146 GLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLAVKFISDTNEVDIPPN 204
Query: 184 AETGTYRWMAPEL 196
GT R+M PE+
Sbjct: 205 TRVGTKRYMPPEV 217
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 41 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 98
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 99 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------LNNIVKCQKLTDDHVQF 152
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED + +K+ DFGLAR + M T
Sbjct: 153 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTD--DEMXGYVATR 209
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 210 WYRAPEI 216
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Query: 98 MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIHRDLKPENLL 157
++IV E L GG L + + + A I A++ LHS I HRD+KPENLL
Sbjct: 88 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 147
Query: 158 LTEDL--KTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
T +KL DFG A+E + +T T ++APE+
Sbjct: 148 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 188
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 38 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 95
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 96 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------LNNIVKCQKLTDDHVQF 149
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED + +K+ DFGLAR + M T
Sbjct: 150 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTD--DEMXGXVATR 206
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 207 WYRAPEI 213
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 71/143 (49%), Gaps = 13/143 (9%)
Query: 60 TPEEIAKKESRFAREVAMLSRVQ-HRNLVKFIGACK-EPVMVIVTELLSGGTLRKYLLNM 117
+ EE+ + +EV +L +V H N+++ + +V +L+ G L YL
Sbjct: 59 SAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE- 117
Query: 118 RPRCLDVCVAIGFALDIARAME----CLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLA 173
V ++ I RA+ LH I+HRDLKPEN+LL +D+ IKL DFG +
Sbjct: 118 -----KVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDM-NIKLTDFGFS 171
Query: 174 REESLTEMMTAETGTYRWMAPEL 196
+ E + + GT ++APE+
Sbjct: 172 CQLDPGEKLRSVCGTPSYLAPEI 194
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 18 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------LNNIVKCQKLTDDHVQF 129
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED + +K+ DFGLAR + M T
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTD--DEMAGFVATR 186
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 187 WYRAPEI 193
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 18 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------LNNIVKCQKLTDDHVQF 129
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED + +K+ DFGLAR + M T
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTD--DEMAGFVATR 186
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 187 WYRAPEI 193
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 14 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 71
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 72 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------LNNIVKCQKLTDDHVQF 125
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED + +K+ DFGLAR + M T
Sbjct: 126 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTD--DEMAGFVATR 182
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 183 WYRAPEI 189
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Query: 98 MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIHRDLKPENLL 157
++IV E L GG L + + + A I A++ LHS I HRD+KPENLL
Sbjct: 88 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 147
Query: 158 LTEDL--KTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
T +KL DFG A+E + +T T ++APE+
Sbjct: 148 YTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEV 188
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 87/172 (50%), Gaps = 28/172 (16%)
Query: 17 AKWLIDPKHLFVGPRIGEGAHAKVYEG--KYKNQTVAIKIVHKGETPEEIAKKESRFARE 74
+ W I P + IG G++ V E K + + VAIK + + E++ + R RE
Sbjct: 47 SDWQI-PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILR--VFEDLIDCK-RILRE 102
Query: 75 VAMLSRVQHRNLVKFIGAC------KEPVMVIVTELLSGGTLRK------YLLNMRPRCL 122
+A+L+R+ H ++VK + K + +V E+ + +K YL + + L
Sbjct: 103 IAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEI-ADSDFKKLFRTPVYLTELHIKTL 161
Query: 123 DVCVAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR 174
+ +G ++ +HS GI+HRDLKP N L+ +D ++K+ DFGLAR
Sbjct: 162 LYNLLVG--------VKYVHSAGILHRDLKPANCLVNQDC-SVKVCDFGLAR 204
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 80/173 (46%), Gaps = 17/173 (9%)
Query: 32 IGEGAHAKV--YEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+G+G KV K + A+KI+ K E+ + A V SRV F
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRK-----EVIIAKDEVAHTVTE-SRVLQNTRHPF 66
Query: 90 IGACKEPV-----MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
+ A K + V E +GG L +L R R A + +I A+E LHS
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLAREE-SLTEMMTAETGTYRWMAPEL 196
+++RD+K ENL+L +D IK+ DFGL +E S M GT ++APE+
Sbjct: 125 DVVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEV 176
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 80/173 (46%), Gaps = 17/173 (9%)
Query: 32 IGEGAHAKV--YEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+G+G KV K + A+KI+ K E+ + A V SRV F
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRK-----EVIIAKDEVAHTVTE-SRVLQNTRHPF 66
Query: 90 IGACKEPV-----MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
+ A K + V E +GG L +L R R A + +I A+E LHS
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLAREE-SLTEMMTAETGTYRWMAPEL 196
+++RD+K ENL+L +D IK+ DFGL +E S M GT ++APE+
Sbjct: 125 DVVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEV 176
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 80/173 (46%), Gaps = 17/173 (9%)
Query: 32 IGEGAHAKV--YEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+G+G KV K + A+KI+ K E+ + A V SRV F
Sbjct: 18 LGKGTFGKVILVREKATGRYYAMKILRK-----EVIIAKDEVAHTVTE-SRVLQNTRHPF 71
Query: 90 IGACKEPV-----MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
+ A K + V E +GG L +L R R A + +I A+E LHS
Sbjct: 72 LTALKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAEIVSALEYLHSR 129
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLAREE-SLTEMMTAETGTYRWMAPEL 196
+++RD+K ENL+L +D IK+ DFGL +E S M GT ++APE+
Sbjct: 130 DVVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEV 181
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 60 TPEEIAKKESRFAREVAMLSRVQ-HRNLVKFIGACK-EPVMVIVTELLSGGTLRKYLLNM 117
+ EE+ + +EV +L +V H N+++ + +V +L+ G L YL
Sbjct: 46 SAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE- 104
Query: 118 RPRCLDVCVAIGFALDIARAME----CLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLA 173
V ++ I RA+ LH I+HRDLKPEN+LL +D+ IKL DFG +
Sbjct: 105 -----KVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDM-NIKLTDFGFS 158
Query: 174 REESLTEMMTAETGTYRWMAPEL 196
+ E + GT ++APE+
Sbjct: 159 CQLDPGEKLREVCGTPSYLAPEI 181
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 18 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------LNNIVKCQKLTDDHVQF 129
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED + +K+ FGLAR + MT T
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILGFGLARHTD--DEMTGYVATR 186
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 187 WYRAPEI 193
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 71/136 (52%), Gaps = 6/136 (4%)
Query: 65 AKKESRFAREVAMLSRVQHRNLVKFIGA-CKEPVMVIVTELLSGGTLRKYLLNMRPRCLD 123
A+ + RE + ++H N+V+ + +E ++ +L++GG L + ++ R +
Sbjct: 51 ARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIV-AREYYSE 109
Query: 124 VCVAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLK--TIKLADFGLARE-ESLTE 180
+ + + C H G++HR+LKPENLLL LK +KLADFGLA E E +
Sbjct: 110 ADASHCIQQILEAVLHC-HQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ 168
Query: 181 MMTAETGTYRWMAPEL 196
GT +++PE+
Sbjct: 169 AWFGFAGTPGYLSPEV 184
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 60 TPEEIAKKESRFAREVAMLSRVQ-HRNLVKFIGACK-EPVMVIVTELLSGGTLRKYLLNM 117
+ EE+ + +EV +L +V H N+++ + +V +L+ G L YL
Sbjct: 59 SAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE- 117
Query: 118 RPRCLDVCVAIGFALDIARAME----CLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLA 173
V ++ I RA+ LH I+HRDLKPEN+LL +D+ IKL DFG +
Sbjct: 118 -----KVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDM-NIKLTDFGFS 171
Query: 174 REESLTEMMTAETGTYRWMAPEL 196
+ E + GT ++APE+
Sbjct: 172 CQLDPGEKLREVCGTPSYLAPEI 194
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 79/179 (44%), Gaps = 22/179 (12%)
Query: 32 IGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+GEGA+ V +K + VAIK + + P R RE+ +L +H N++
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFDKP----LFALRTLREIKILKHFKHENIITI 74
Query: 90 IGACKEPV------MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHS 143
+ + I+ EL+ R M L F RA++ LH
Sbjct: 75 FNIQRPDSFENFNEVYIIQELMQTDLHRVISTQM----LSDDHIQYFIYQTLRAVKVLHG 130
Query: 144 HGIIHRDLKPENLLLTEDLKTIKLADFGLAR--EESL---TEMMTAETGTYRWMAPELY 197
+IHRDLKP NLL+ + +K+ DFGLAR +ES +E ++G ++A Y
Sbjct: 131 SNVIHRDLKPSNLLINSNCD-LKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWY 188
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 80/173 (46%), Gaps = 17/173 (9%)
Query: 32 IGEGAHAKV--YEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+G+G KV K + A+KI+ K E+ + A V SRV F
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRK-----EVIIAKDEVAHTVTE-SRVLQNTRHPF 66
Query: 90 IGACKEPV-----MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
+ A K + V E +GG L +L R R A + +I A+E LHS
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLAREE-SLTEMMTAETGTYRWMAPEL 196
+++RD+K ENL+L +D IK+ DFGL +E S M GT ++APE+
Sbjct: 125 DVVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEV 176
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 87/215 (40%), Gaps = 26/215 (12%)
Query: 98 MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIHRDLKPENLL 157
++IV E L GG L + + + A I A++ LHS I HRD+KPENLL
Sbjct: 90 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 149
Query: 158 LTEDL--KTIKLADFGLARE------ESLTEMMTAETGTYRWMA--PELYST-------- 199
T +KL DFG A+E + +M + Y + P YS
Sbjct: 150 YTSKRPNAILKLTDFGFAKETTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG 209
Query: 200 --VTLRQGEKKHYNHKNVRPSAENVPEELSIILTSCWKEDPNARPNFTQIIQMLLNYLSA 257
+R G+ + N P V EE+ +++ + K +P R T+ + S
Sbjct: 210 MKTRIRMGQYEFPN-----PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 264
Query: 258 IAPPEPMIPHRIFNSENTILPP-ESPGTSSLMTVR 291
P P+ R+ + + TS+L T+R
Sbjct: 265 KVPQTPLHTSRVLKEDKERWEDVKEEMTSALATMR 299
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 96/191 (50%), Gaps = 21/191 (10%)
Query: 15 LDAKWLIDPKHLFVGPRIGEGAHAKVY--EGKYKNQTVAIKIVHKGETPEEIAKKESRFA 72
LD L D L V +G+G+ KV + K + AIKI+ K ++ + +
Sbjct: 13 LDRVKLTDFNFLMV---LGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVE 69
Query: 73 REVAMLSRVQHRNLVKFIGACKEPV--MVIVTELLSGGTLRKYLLNM----RPRCLDVCV 126
+ V L+ + + + +C + V + V E ++GG L ++ + P+
Sbjct: 70 KRV--LALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQ------ 121
Query: 127 AIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAE- 185
A+ +A +I+ + LH GII+RDLK +N++L + IK+ADFG+ +E + + T E
Sbjct: 122 AVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSE-GHIKIADFGMCKEHMMDGVTTREF 180
Query: 186 TGTYRWMAPEL 196
GT ++APE+
Sbjct: 181 CGTPDYIAPEI 191
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 84/178 (47%), Gaps = 11/178 (6%)
Query: 28 VGPRIGEGAHAKVYEGKYKNQT--VAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G +G+G VY + K +A+K++ K + +E E + RE+ + S ++H N
Sbjct: 19 IGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGV--EHQLRREIEIQSHLRHPN 76
Query: 86 LVKFIGACKEPVMV-IVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
+++ + + ++ E G L K L + D + F ++A A+ H
Sbjct: 77 ILRMYNYFHDRKRIYLMLEFAPRGELYKEL--QKHGRFDEQRSATFMEELADALHYCHER 134
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLA-REESLTEMMTAETGTYRWMAPELYSTVT 201
+IHRD+KPENLL+ +K+ADFG + SL GT ++ PE+ T
Sbjct: 135 KVIHRDIKPENLLMGYK-GELKIADFGWSVHAPSLRRRXMC--GTLDYLPPEMIEGKT 189
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 18 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------LNNIVKCQKLTDDHVQF 129
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED + +K+ DF LAR + MT T
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFYLARHTD--DEMTGYVATR 186
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 187 WYRAPEI 193
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 84/178 (47%), Gaps = 11/178 (6%)
Query: 28 VGPRIGEGAHAKVYEGKYKNQT--VAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRN 85
+G +G+G VY + K +A+K++ K + +E E + RE+ + S ++H N
Sbjct: 18 IGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGV--EHQLRREIEIQSHLRHPN 75
Query: 86 LVKFIGACKEPVMV-IVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
+++ + + ++ E G L K L + D + F ++A A+ H
Sbjct: 76 ILRMYNYFHDRKRIYLMLEFAPRGELYKEL--QKHGRFDEQRSATFMEELADALHYCHER 133
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLA-REESLTEMMTAETGTYRWMAPELYSTVT 201
+IHRD+KPENLL+ +K+ADFG + SL GT ++ PE+ T
Sbjct: 134 KVIHRDIKPENLLMGYK-GELKIADFGWSVHAPSLRRRXMC--GTLDYLPPEMIEGKT 188
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 37/186 (19%)
Query: 32 IGEGAHAK-VYEGKYKNQTVAIKIVHKGETPE--EIAKKESRFAREVAMLSRVQHRNLVK 88
+G GA VY G + N+ VA+K + PE A +E + RE +H N+++
Sbjct: 32 LGHGAEGTIVYRGMFDNRDVAVKRI----LPECFSFADREVQLLRESD-----EHPNVIR 82
Query: 89 FIGACKEPVMVIVTELLSGGTLRKYL-------LNMRPRCLDVCVAIGFALDIARAMECL 141
+ K+ + L TL++Y+ L + P L G A L
Sbjct: 83 YFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAH--------L 134
Query: 142 HSHGIIHRDLKPENLLLT-----EDLKTIKLADFGLAREESLT----EMMTAETGTYRWM 192
HS I+HRDLKP N+L++ +K + ++DFGL ++ ++ + GT W+
Sbjct: 135 HSLNIVHRDLKPHNILISMPNAHGKIKAM-ISDFGLCKKLAVGRHSFSRRSGVPGTEGWI 193
Query: 193 APELYS 198
APE+ S
Sbjct: 194 APEMLS 199
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 18 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------LNNIVKCQKLTDDHVQF 129
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED + +K+ D GLAR + MT T
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDAGLARHTD--DEMTGYVATR 186
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 187 WYRAPEI 193
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 89/181 (49%), Gaps = 23/181 (12%)
Query: 28 VGPRIGEGAHAKVYEGK--YKNQTVAIKIVH-KGETPEEIAKKESRFAREVAMLSRVQHR 84
VG +IG G ++ GK Y N+ VAIK+ K P+ E RF ++++ V
Sbjct: 8 VGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQ--LHLEYRFYKQLSATEGVPQ- 64
Query: 85 NLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
V + G + +V ELL G +L L ++ R + + A+ + ME +H+
Sbjct: 65 --VYYFGPXGK-YNAMVLELL-GPSLED-LFDLCDRTFTLKTVLMIAIQLITRMEYVHTK 119
Query: 145 GIIHRDLKPENLLL----TEDLKTIKLADFGLARE----ESLTEMMTAE----TGTYRWM 192
+I+RD+KPEN L+ T+ I + DFGLA+E E+ + E TGT R+M
Sbjct: 120 SLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYM 179
Query: 193 A 193
+
Sbjct: 180 S 180
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 79/170 (46%), Gaps = 35/170 (20%)
Query: 31 RIGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+IG+G +V++ +++ Q VA+K V E RE+ +L ++H N+V
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITA---LREIKILQLLKHENVVN 81
Query: 89 FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVC----------VAIGFAL-DIARA 137
I C+ G++ YL+ D C V + F L +I R
Sbjct: 82 LIEICRTKASPYNR---CKGSI--YLV------FDFCEHDLAGLLSNVLVKFTLSEIKRV 130
Query: 138 MECL-------HSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTE 180
M+ L H + I+HRD+K N+L+T D +KLADFGLAR SL +
Sbjct: 131 MQMLLNGLYYIHRNKILHRDMKAANVLITRD-GVLKLADFGLARAFSLAK 179
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 18 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------LNNIVKCQKLTDDHVQF 129
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED + +K+ D GLAR + MT T
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDRGLARHTD--DEMTGYVATR 186
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 187 WYRAPEI 193
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 25/178 (14%)
Query: 30 PRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRF----AREVAMLSRVQHRN 85
PR+G G+ +V+ K K +T + A K+ R E+ + +
Sbjct: 64 PRVGRGSFGEVHRMKDK------------QTGFQCAVKKVRLEVFRVEELVACAGLSSPR 111
Query: 86 LVKFIGACKE-PVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
+V GA +E P + I ELL GG+L + + M CL A+ + +E LH+
Sbjct: 112 IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLHTR 169
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLA---REESLTE-MMTAET--GTYRWMAPEL 196
I+H D+K +N+LL+ D L DFG A + + L + ++T + GT MAPE+
Sbjct: 170 RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV 227
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 79/170 (46%), Gaps = 35/170 (20%)
Query: 31 RIGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+IG+G +V++ +++ Q VA+K V E RE+ +L ++H N+V
Sbjct: 24 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITA---LREIKILQLLKHENVVN 80
Query: 89 FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVC----------VAIGFAL-DIARA 137
I C+ G++ YL+ D C V + F L +I R
Sbjct: 81 LIEICRTKASPYNR---CKGSI--YLV------FDFCEHDLAGLLSNVLVKFTLSEIKRV 129
Query: 138 MECL-------HSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTE 180
M+ L H + I+HRD+K N+L+T D +KLADFGLAR SL +
Sbjct: 130 MQMLLNGLYYIHRNKILHRDMKAANVLITRD-GVLKLADFGLARAFSLAK 178
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 20/187 (10%)
Query: 19 WLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAML 78
W + ++ + P +G GA+ V + +T V K P + R RE+ +L
Sbjct: 18 WEVPERYQNLSP-VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 79 SRVQHRNLVKFIGACKEPV-------MVIVTELLSGGTLRKYLLNMRPRCLDVCVA-IGF 130
++H N++ + + +VT L+ LN +C + + F
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD------LNNIVKCQKLTDDHVQF 129
Query: 131 AL-DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ I R ++ +HS IIHRDLKP NL + ED + +K+ D GLAR + MT T
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDGGLARHTD--DEMTGYVATR 186
Query: 190 RWMAPEL 196
+ APE+
Sbjct: 187 WYRAPEI 193
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 25/178 (14%)
Query: 30 PRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRF----AREVAMLSRVQHRN 85
PR+G G+ +V+ K K +T + A K+ R E+ + +
Sbjct: 80 PRVGRGSFGEVHRMKDK------------QTGFQCAVKKVRLEVFRVEELVACAGLSSPR 127
Query: 86 LVKFIGACKE-PVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
+V GA +E P + I ELL GG+L + + M CL A+ + +E LH+
Sbjct: 128 IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLHTR 185
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLA---REESLTE-MMTAET--GTYRWMAPEL 196
I+H D+K +N+LL+ D L DFG A + + L + ++T + GT MAPE+
Sbjct: 186 RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV 243
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 84/181 (46%), Gaps = 30/181 (16%)
Query: 35 GAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKES-RFAREVAMLSRVQHRNLVKFIGAC 93
G V++ + N+ VA+KI I K+S + EV L ++H N+++FIGA
Sbjct: 35 GRFGCVWKAQLLNEYVAVKIF-------PIQDKQSWQNEYEVYSLPGMKHENILQFIGAE 87
Query: 94 KEPVMV-----IVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH---- 144
K V ++T G+L +L ++C A +AR + LH
Sbjct: 88 KRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELC---HIAETMARGLAYLHEDIPGL 144
Query: 145 ------GIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMT---AETGTYRWMAPE 195
I HRD+K +N+LL +L T +ADFGLA + + + GT R+MAPE
Sbjct: 145 KDGHKPAISHRDIKSKNVLLKNNL-TACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPE 203
Query: 196 L 196
+
Sbjct: 204 V 204
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 92/184 (50%), Gaps = 12/184 (6%)
Query: 20 LIDP---KHLFVGPRIGEGAHAKVYE--GKYKNQTVAIKIVHKGETPEEIAKKESRFARE 74
L+DP K G +G+G AK YE + A K+V K + ++ + + E
Sbjct: 35 LVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLK--PHQKEKMSTE 92
Query: 75 VAMLSRVQHRNLVKFIGACKEPVMV-IVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALD 133
+A+ + + ++V F G ++ V +V E+ +L + L+ R + + A F
Sbjct: 93 IAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE--LHKRRKAVTEPEARYFMRQ 150
Query: 134 IARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLARE-ESLTEMMTAETGTYRWM 192
+ ++ LH++ +IHRDLK NL L +D+ +K+ DFGLA + E E GT ++
Sbjct: 151 TIQGVQYLHNNRVIHRDLKLGNLFLNDDMD-VKIGDFGLATKIEFDGERKKTLCGTPNYI 209
Query: 193 APEL 196
APE+
Sbjct: 210 APEV 213
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 25/178 (14%)
Query: 30 PRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRF----AREVAMLSRVQHRN 85
PR+G G+ +V+ K K +T + A K+ R E+ + +
Sbjct: 78 PRLGRGSFGEVHRMKDK------------QTGFQCAVKKVRLEVFRVEELVACAGLSSPR 125
Query: 86 LVKFIGACKE-PVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
+V GA +E P + I ELL GG+L + + M CL A+ + +E LH+
Sbjct: 126 IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLHTR 183
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLA---REESLTE-MMTAET--GTYRWMAPEL 196
I+H D+K +N+LL+ D L DFG A + + L + ++T + GT MAPE+
Sbjct: 184 RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV 241
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 79/170 (46%), Gaps = 35/170 (20%)
Query: 31 RIGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+IG+G +V++ +++ Q VA+K V E RE+ +L ++H N+V
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITA---LREIKILQLLKHENVVN 81
Query: 89 FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVC----------VAIGFAL-DIARA 137
I C+ G++ YL+ D C V + F L +I R
Sbjct: 82 LIEICRTKASPYNR---CKGSI--YLV------FDFCEHDLAGLLSNVLVKFTLSEIKRV 130
Query: 138 MECL-------HSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTE 180
M+ L H + I+HRD+K N+L+T D +KLADFGLAR SL +
Sbjct: 131 MQMLLNGLYYIHRNKILHRDMKAANVLITRD-GVLKLADFGLARAFSLAK 179
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 23 PKHLFVGPRIGEGAHAKVYEGKYKN--QTVAIKIVHKGETPEEIAKKESRFAREVAMLSR 80
P + + IG G++ VY KN + VAIK V++ E++ + R RE+ +L+R
Sbjct: 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNR--MFEDLIDCK-RILREITILNR 81
Query: 81 VQHRNLVKFIGACKEPVMVIVTEL-----LSGGTLRKYLLNMRPRCLDVCVAIGFALDIA 135
++ +++ ++ EL ++ L+K L P L ++
Sbjct: 82 LKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKK--LFKTPIFLTEEHIKTILYNLL 139
Query: 136 RAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR 174
+H GIIHRDLKP N LL +D ++K+ DFGLAR
Sbjct: 140 LGENFIHESGIIHRDLKPANCLLNQDC-SVKVCDFGLAR 177
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 92/184 (50%), Gaps = 12/184 (6%)
Query: 20 LIDP---KHLFVGPRIGEGAHAKVYE--GKYKNQTVAIKIVHKGETPEEIAKKESRFARE 74
L+DP K G +G+G AK YE + A K+V K + ++ + + E
Sbjct: 35 LVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLK--PHQKEKMSTE 92
Query: 75 VAMLSRVQHRNLVKFIGACKEPVMV-IVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALD 133
+A+ + + ++V F G ++ V +V E+ +L + L+ R + + A F
Sbjct: 93 IAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE--LHKRRKAVTEPEARYFMRQ 150
Query: 134 IARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLARE-ESLTEMMTAETGTYRWM 192
+ ++ LH++ +IHRDLK NL L +D+ +K+ DFGLA + E E GT ++
Sbjct: 151 TIQGVQYLHNNRVIHRDLKLGNLFLNDDMD-VKIGDFGLATKIEFDGERKKXLCGTPNYI 209
Query: 193 APEL 196
APE+
Sbjct: 210 APEV 213
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%)
Query: 130 FALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ + RA+ +HS GI HRD+KP+NLL+ T+KL DFG A++ +E A +
Sbjct: 146 YIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAXICSR 205
Query: 190 RWMAPEL 196
+ APEL
Sbjct: 206 FYRAPEL 212
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 88/172 (51%), Gaps = 14/172 (8%)
Query: 32 IGEGAHAKVYEGKYK--NQTVAIKIVHKG--ETPEEIAKKESRFAREVAMLSRVQHRNLV 87
IG G++AKV + K ++ A+K+V K E+I ++ E + + + +
Sbjct: 17 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQT----EKHVFEQASNHPFL 72
Query: 88 KFIGAC--KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
+ +C E + V E ++GG L ++ R R L A ++ +I+ A+ LH G
Sbjct: 73 VGLHSCFQTESRLFFVIEYVNGGDLMFHM--QRQRKLPEEHARFYSAEISLALNYLHERG 130
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAE-TGTYRWMAPEL 196
II+RDLK +N+LL + IKL D+G+ +E T+ GT ++APE+
Sbjct: 131 IIYRDLKLDNVLLDSE-GHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEI 181
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 92/184 (50%), Gaps = 12/184 (6%)
Query: 20 LIDP---KHLFVGPRIGEGAHAKVYE--GKYKNQTVAIKIVHKGETPEEIAKKESRFARE 74
L+DP K G +G+G AK YE + A K+V K + ++ + + E
Sbjct: 19 LVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLK--PHQKEKMSTE 76
Query: 75 VAMLSRVQHRNLVKFIGACKEPVMV-IVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALD 133
+A+ + + ++V F G ++ V +V E+ +L + L+ R + + A F
Sbjct: 77 IAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE--LHKRRKAVTEPEARYFMRQ 134
Query: 134 IARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLARE-ESLTEMMTAETGTYRWM 192
+ ++ LH++ +IHRDLK NL L +D+ +K+ DFGLA + E E GT ++
Sbjct: 135 TIQGVQYLHNNRVIHRDLKLGNLFLNDDMD-VKIGDFGLATKIEFDGERKKDLCGTPNYI 193
Query: 193 APEL 196
APE+
Sbjct: 194 APEV 197
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 88/172 (51%), Gaps = 14/172 (8%)
Query: 32 IGEGAHAKVYEGKYK--NQTVAIKIVHKG--ETPEEIAKKESRFAREVAMLSRVQHRNLV 87
IG G++AKV + K ++ A+K+V K E+I ++ E + + + +
Sbjct: 13 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQT----EKHVFEQASNHPFL 68
Query: 88 KFIGAC--KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
+ +C E + V E ++GG L ++ R R L A ++ +I+ A+ LH G
Sbjct: 69 VGLHSCFQTESRLFFVIEYVNGGDLMFHM--QRQRKLPEEHARFYSAEISLALNYLHERG 126
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAE-TGTYRWMAPEL 196
II+RDLK +N+LL + IKL D+G+ +E T+ GT ++APE+
Sbjct: 127 IIYRDLKLDNVLLDSE-GHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEI 177
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 53/103 (51%), Gaps = 24/103 (23%)
Query: 124 VCVAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLA-------REE 176
VC+ I + IA A+E LHS G++HRDLKP N+ T D +K+ DFGL E+
Sbjct: 165 VCLHI--FIQIAEAVEFLHSKGLMHRDLKPSNIFFTMD-DVVKVGDFGLVTAMDQDEEEQ 221
Query: 177 SLTEMMTA------ETGTYRWMAPELYSTVTLRQGEKKHYNHK 213
++ M A + GT +M+PE Q +Y+HK
Sbjct: 222 TVLTPMPAYATHXGQVGTKLYMSPE--------QIHGNNYSHK 256
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 114/265 (43%), Gaps = 43/265 (16%)
Query: 26 LFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESR-----FAREVAMLSR 80
L +G+G K+++G + + +H+ E ++ K R F +M+S+
Sbjct: 10 LIFNESLGQGTFTKIFKG-VRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSK 68
Query: 81 VQHRNLVKFIGACK-EPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAME 139
+ H++LV G C ++V E + G+L YL + C+++ + A +A AM
Sbjct: 69 LSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNK-NCINILWKLEVAKQLAAAMH 127
Query: 140 CLHSHGIIHRDLKPENLLLT--EDLKT-----IKLADFGLARE----------------E 176
L + +IH ++ +N+LL ED KT IKL+D G++ E
Sbjct: 128 FLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPE 187
Query: 177 SLTEMMTAETGTYRW-MAPELYSTVTL---------RQGEKKHYNHKNVRPSAENVPEEL 226
+ T +W L+ + Q + + Y ++ P+ + EL
Sbjct: 188 CIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQLPAPK--AAEL 245
Query: 227 SIILTSCWKEDPNARPNFTQIIQML 251
+ ++ +C +P+ RP+F II+ L
Sbjct: 246 ANLINNCMDYEPDHRPSFRAIIRDL 270
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 84/172 (48%), Gaps = 19/172 (11%)
Query: 31 RIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAK--KESRFAREVAMLSRVQHR-NLV 87
++G G +++V+E AI I + + +I K K+++ RE+ +L ++ N++
Sbjct: 44 KLGRGKYSEVFE--------AINITNNEKVVVKILKPVKKNKIKREIKILENLRGGPNII 95
Query: 88 KFIGACKEPVM---VIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
K+PV +V E ++ ++ + D + + +I +A++ HS
Sbjct: 96 TLADIVKDPVSRTPALVFEHVNNTDFKQ----LYQTLTDYDIRF-YMYEILKALDYCHSM 150
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
GI+HRD+KP N+++ + + ++L D+GLA + + + PEL
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 77/170 (45%), Gaps = 35/170 (20%)
Query: 31 RIGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
+IG+G +V++ +++ Q VA+K V E RE+ +L ++H N+V
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITA---LREIKILQLLKHENVVN 81
Query: 89 FIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVC----------VAIGFAL-DIARA 137
I C+ + YL+ D C V + F L +I R
Sbjct: 82 LIEICRTK-----ASPYNRCKASIYLV------FDFCEHDLAGLLSNVLVKFTLSEIKRV 130
Query: 138 MECL-------HSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTE 180
M+ L H + I+HRD+K N+L+T D +KLADFGLAR SL +
Sbjct: 131 MQMLLNGLYYIHRNKILHRDMKAANVLITRD-GVLKLADFGLARAFSLAK 179
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 92/184 (50%), Gaps = 12/184 (6%)
Query: 20 LIDP---KHLFVGPRIGEGAHAKVYE--GKYKNQTVAIKIVHKGETPEEIAKKESRFARE 74
L+DP K G +G+G AK YE + A K+V K + ++ + + E
Sbjct: 35 LVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLK--PHQKEKMSTE 92
Query: 75 VAMLSRVQHRNLVKFIGACKEPVMV-IVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALD 133
+A+ + + ++V F G ++ V +V E+ +L + L+ R + + A F
Sbjct: 93 IAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE--LHKRRKAVTEPEARYFMRQ 150
Query: 134 IARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLARE-ESLTEMMTAETGTYRWM 192
+ ++ LH++ +IHRDLK NL L +D+ +K+ DFGLA + E E GT ++
Sbjct: 151 TIQGVQYLHNNRVIHRDLKLGNLFLNDDMD-VKIGDFGLATKIEFDGERKKDLCGTPNYI 209
Query: 193 APEL 196
APE+
Sbjct: 210 APEV 213
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 80/181 (44%), Gaps = 29/181 (16%)
Query: 35 GAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKFIGACK 94
G V++ + N VA+KI + K+ + RE+ ++H NL++FI A K
Sbjct: 26 GRFGCVWKAQLMNDFVAVKIFPLQD------KQSWQSEREIFSTPGMKHENLLQFIAAEK 79
Query: 95 -----EPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH----- 144
E + ++T G+L YL ++C A ++R + LH
Sbjct: 80 RGSNLEVELWLITAFHDKGSLTDYLKGNIITWNELC---HVAETMSRGLSYLHEDVPWCR 136
Query: 145 ------GIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTE---MMTAETGTYRWMAPE 195
I HRD K +N+LL DL + LADFGLA + + GT R+MAPE
Sbjct: 137 GEGHKPSIAHRDFKSKNVLLKSDLTAV-LADFGLAVRFEPGKPPGDTHGQVGTRRYMAPE 195
Query: 196 L 196
+
Sbjct: 196 V 196
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 114/265 (43%), Gaps = 43/265 (16%)
Query: 26 LFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESR-----FAREVAMLSR 80
L +G+G K+++G + + +H+ E ++ K R F +M+S+
Sbjct: 10 LIFNESLGQGTFTKIFKG-VRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSK 68
Query: 81 VQHRNLVKFIGACK-EPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAME 139
+ H++LV G C ++V E + G+L YL + C+++ + A +A AM
Sbjct: 69 LSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNK-NCINILWKLEVAKQLAWAMH 127
Query: 140 CLHSHGIIHRDLKPENLLLT--EDLKT-----IKLADFGLARE----------------E 176
L + +IH ++ +N+LL ED KT IKL+D G++ E
Sbjct: 128 FLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPE 187
Query: 177 SLTEMMTAETGTYRW-MAPELYSTVTL---------RQGEKKHYNHKNVRPSAENVPEEL 226
+ T +W L+ + Q + + Y ++ P+ + EL
Sbjct: 188 CIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQLPAPK--AAEL 245
Query: 227 SIILTSCWKEDPNARPNFTQIIQML 251
+ ++ +C +P+ RP+F II+ L
Sbjct: 246 ANLINNCMDYEPDHRPSFRAIIRDL 270
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 78/175 (44%), Gaps = 15/175 (8%)
Query: 33 GEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKFIGA 92
G+G V GK K+ +++ I + P +E + +++A+L L +
Sbjct: 32 GQGTFGTVQLGKEKSTGMSVAIKKVIQDPR-FRNRELQIMQDLAVLHHPNIVQLQSYFYT 90
Query: 93 CKEP---------VMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLH- 142
E VM V + L Y + P + + V F + R++ CLH
Sbjct: 91 LGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKV---FLFQLIRSIGCLHL 147
Query: 143 -SHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
S + HRD+KP N+L+ E T+KL DFG A++ S +E A + + APEL
Sbjct: 148 PSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPEL 202
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 88/172 (51%), Gaps = 14/172 (8%)
Query: 32 IGEGAHAKVYEGKYK--NQTVAIKIVHKG--ETPEEIAKKESRFAREVAMLSRVQHRNLV 87
IG G++AKV + K ++ A+K+V K E+I ++ E + + + +
Sbjct: 28 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQT----EKHVFEQASNHPFL 83
Query: 88 KFIGAC--KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
+ +C E + V E ++GG L ++ R R L A ++ +I+ A+ LH G
Sbjct: 84 VGLHSCFQTESRLFFVIEYVNGGDLMFHM--QRQRKLPEEHARFYSAEISLALNYLHERG 141
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAE-TGTYRWMAPEL 196
II+RDLK +N+LL + IKL D+G+ +E T+ GT ++APE+
Sbjct: 142 IIYRDLKLDNVLLDSE-GHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEI 192
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 89/173 (51%), Gaps = 16/173 (9%)
Query: 32 IGEGAHAKVYEGKYK--NQTVAIKIVHKG--ETPEEIAKKESRFAREVAMLSRVQHRNLV 87
IG G++AKV + K ++ A+++V K E+I ++ E + + + +
Sbjct: 60 IGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQT----EKHVFEQASNHPFL 115
Query: 88 KFIGAC--KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHG 145
+ +C E + V E ++GG L ++ R R L A ++ +I+ A+ LH G
Sbjct: 116 VGLHSCFQTESRLFFVIEYVNGGDLMFHM--QRQRKLPEEHARFYSAEISLALNYLHERG 173
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAET--GTYRWMAPEL 196
II+RDLK +N+LL + IKL D+G+ + E L T T GT ++APE+
Sbjct: 174 IIYRDLKLDNVLLDSE-GHIKLTDYGMCK-EGLRPGDTTSTFCGTPNYIAPEI 224
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 90/213 (42%), Gaps = 46/213 (21%)
Query: 32 IGEGAHAKVYEGK--YKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+G+GA +V + + ++ AIK + E +K S EV +L+ + H+ +V++
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTE------EKLSTILSEVMLLASLNHQYVVRY 67
Query: 90 IGAC--------------KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIA 135
A K+ + I E GTL L++ I
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYD-LIHSENLNQQRDEYWRLFRQIL 126
Query: 136 RAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLARE--ESL-------------TE 180
A+ +HS GIIHRDLKP N+ + E + +K+ DFGLA+ SL ++
Sbjct: 127 EALSYIHSQGIIHRDLKPMNIFIDES-RNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 181 MMTAETGTYRWMAPELYSTVTLRQGEKKHYNHK 213
+T+ GT ++A E+ HYN K
Sbjct: 186 NLTSAIGTAMYVATEVLDGTG-------HYNEK 211
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 83/174 (47%), Gaps = 11/174 (6%)
Query: 32 IGEGAHAKVYEGKYKNQ--TVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+G+G VY + K +A+K++ K + +E + + R RE+ + S ++H N+++
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLR--REIEIQSHLRHPNILRM 79
Query: 90 IGACKEPVMV-IVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
+ + ++ E G L K L + D + F ++A A+ H +IH
Sbjct: 80 YNYFHDRKRIYLMLEFAPRGELYKEL--QKHGRFDEQRSATFMEELADALHYCHERKVIH 137
Query: 149 RDLKPENLLLTEDLKTIKLADFGLA-REESLTEMMTAETGTYRWMAPELYSTVT 201
RD+KPENLL+ +K+ADFG + SL GT ++ PE+ T
Sbjct: 138 RDIKPENLLMGYK-GELKIADFGWSVHAPSLRRRXMC--GTLDYLPPEMIEGKT 188
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 32/185 (17%)
Query: 32 IGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRV--QHRNLVKF 89
+G+G + +V+ G + ++VA+KI ++ E + RE + + V +H N++ F
Sbjct: 16 VGKGRYGEVWRGLWHGESVAVKIFS--------SRDEQSWFRETEIYNTVLLRHDNILGF 67
Query: 90 IGA-----CKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
I + + ++T G+L +L + + L+ +A+ A+ A + LH
Sbjct: 68 IASDMTSRNSSTQLWLITHYHEHGSLYDFL---QRQTLEPHLALRLAVSAACGLAHLHVE 124
Query: 145 --------GIIHRDLKPENLLLTEDLKTIKLADFGLAREES-----LTEMMTAETGTYRW 191
I HRD K N+L+ +L+ +AD GLA S L GT R+
Sbjct: 125 IFGTQGKPAIAHRDFKSRNVLVKSNLQCC-IADLGLAVMHSQGSDYLDIGNNPRVGTKRY 183
Query: 192 MAPEL 196
MAPE+
Sbjct: 184 MAPEV 188
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 92/203 (45%), Gaps = 22/203 (10%)
Query: 3 SRSRFYLADELKLDAKWLIDPKHLFVGPRIGEGAHAKV---YEGKYKNQTVAIKIVHKGE 59
+RS FY + K W + + + P +G GA+ V +G+ VAIK +++
Sbjct: 7 ARSGFYRQEVTK--TAWEVRAVYRDLQP-VGSGAYGAVCSAVDGR-TGAKVAIKKLYRPF 62
Query: 60 TPEEIAKKESRFAREVAMLSRVQHRNLVKFIGA-CKEPVMVIVTEL-----LSGGTLRKY 113
E AK R RE+ +L ++H N++ + + + T+ G L K
Sbjct: 63 QSELFAK---RAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKL 119
Query: 114 LLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLA 173
M+ L + + + +H+ GIIHRDLKP NL + ED + +K+ DFGLA
Sbjct: 120 ---MKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCE-LKILDFGLA 175
Query: 174 REESLTEMMTAETGTYRWMAPEL 196
R+ T YR APE+
Sbjct: 176 RQADSEMXGXVVTRWYR--APEV 196
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 65/137 (47%), Gaps = 17/137 (12%)
Query: 70 RFAREVAMLSRVQHRNLV---KFIGACKEPVM---VIVTELLS---GGTLRKYLLNMRPR 120
R RE+ +L+ H N++ +EP M +VTEL+ + + + P+
Sbjct: 75 RVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQ 134
Query: 121 CLDVCVAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTE 180
+ F I + LH G++HRDL P N+LL ++ I + DF LARE++
Sbjct: 135 HIQY-----FMYHILLGLHVLHEAGVVHRDLHPGNILLADN-NDITICDFNLAREDTADA 188
Query: 181 MMTAETGTYRWM-APEL 196
T T+RW APEL
Sbjct: 189 NKTHYV-THRWYRAPEL 204
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 65/137 (47%), Gaps = 17/137 (12%)
Query: 70 RFAREVAMLSRVQHRNLV---KFIGACKEPVM---VIVTELLS---GGTLRKYLLNMRPR 120
R RE+ +L+ H N++ +EP M +VTEL+ + + + P+
Sbjct: 75 RVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQ 134
Query: 121 CLDVCVAIGFALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTE 180
+ F I + LH G++HRDL P N+LL ++ I + DF LARE++
Sbjct: 135 HIQY-----FMYHILLGLHVLHEAGVVHRDLHPGNILLADN-NDITICDFNLAREDTADA 188
Query: 181 MMTAETGTYRWM-APEL 196
T T+RW APEL
Sbjct: 189 NKTHYV-THRWYRAPEL 204
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 84/180 (46%), Gaps = 10/180 (5%)
Query: 32 IGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
IG GA+ V + +K Q +A+K + T +E +K+ +V M S +V+F
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIR--STVDEKEQKQLLMDLDVVMRSS-DCPYIVQF 86
Query: 90 IGAC-KEPVMVIVTELLSGG--TLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH-G 145
GA +E I EL+S KY+ ++ + + L +A+ L +
Sbjct: 87 YGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK 146
Query: 146 IIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRQG 205
IIHRD+KP N+LL IKL DFG++ + + T + G +MAPE RQG
Sbjct: 147 IIHRDIKPSNILLDRS-GNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQG 205
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 85/175 (48%), Gaps = 11/175 (6%)
Query: 32 IGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
IG GA ++V K K Q A+KI++K + + + S F E +L R + +
Sbjct: 69 IGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKR--GEVSCFREERDVLVNGDRRWITQL 126
Query: 90 IGACK-EPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
A + E + +V E GG L L R + +A + +I A++ +H G +H
Sbjct: 127 HFAFQDENYLYLVMEYYVGGDLLTLLSKFGER-IPAEMARFYLAEIVMAIDSVHRLGYVH 185
Query: 149 RDLKPENLLLTEDLKTIKLADFGLA---REESLTEMMTAETGTYRWMAPELYSTV 200
RD+KP+N+LL + I+LADFG R + + A GT +++PE+ V
Sbjct: 186 RDIKPDNILL-DRCGHIRLADFGSCLKLRADGTVRSLVA-VGTPDYLSPEILQAV 238
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 75/150 (50%), Gaps = 13/150 (8%)
Query: 32 IGEGAHAKVYEG--KYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
IG G++ VY K N+ VAIK V++ E++ + R RE+ +L+R++ +++
Sbjct: 36 IGRGSYGYVYLAYDKNANKNVAIKKVNR--MFEDLIDCK-RILREITILNRLKSDYIIRL 92
Query: 90 IGACKEPVMVIVTEL-----LSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
++ EL ++ L+K L P L ++ + +H
Sbjct: 93 HDLIIPEDLLKFDELYIVLEIADSDLKK--LFKTPIFLTEQHVKTILYNLLLGEKFIHES 150
Query: 145 GIIHRDLKPENLLLTEDLKTIKLADFGLAR 174
GIIHRDLKP N LL +D ++K+ DFGLAR
Sbjct: 151 GIIHRDLKPANCLLNQDC-SVKICDFGLAR 179
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 82/175 (46%), Gaps = 21/175 (12%)
Query: 31 RIGEGAHAKVY--EGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
R+G G+ +V+ E K A+K V + E A E+ + + +V
Sbjct: 81 RLGRGSFGEVHRMEDKQTGFQCAVKKV----------RLEVFRAEELMACAGLTSPRIVP 130
Query: 89 FIGACKE-PVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGII 147
GA +E P + I ELL GG+L + L CL A+ + +E LHS I+
Sbjct: 131 LYGAVREGPWVNIFMELLEGGSLGQ--LVKEQGCLPEDRALYYLGQALEGLEYLHSRRIL 188
Query: 148 HRDLKPENLLLTEDLKTIKLADFGLA---REESLT-EMMTAE--TGTYRWMAPEL 196
H D+K +N+LL+ D L DFG A + + L +++T + GT MAPE+
Sbjct: 189 HGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEV 243
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 67/161 (41%), Gaps = 29/161 (18%)
Query: 28 VGPRIGEGAHAKVYEG--KYKNQTVAIKIVHK------GETPEE---------IAKKESR 70
VGP +G G VY G N VAIK V K GE P + K S
Sbjct: 8 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 67
Query: 71 FAREVAMLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGF 130
F+ + +L + + I EPV + + G L++ L A F
Sbjct: 68 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL------------ARSF 115
Query: 131 ALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFG 171
+ A+ H+ G++HRD+K EN+L+ + +KL DFG
Sbjct: 116 FWQVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFG 156
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 82/175 (46%), Gaps = 21/175 (12%)
Query: 31 RIGEGAHAKVY--EGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVK 88
R+G G+ +V+ E K A+K V + E A E+ + + +V
Sbjct: 100 RLGRGSFGEVHRMEDKQTGFQCAVKKV----------RLEVFRAEELMACAGLTSPRIVP 149
Query: 89 FIGACKE-PVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGII 147
GA +E P + I ELL GG+L + L CL A+ + +E LHS I+
Sbjct: 150 LYGAVREGPWVNIFMELLEGGSLGQ--LVKEQGCLPEDRALYYLGQALEGLEYLHSRRIL 207
Query: 148 HRDLKPENLLLTEDLKTIKLADFGLA---REESLTE-MMTAE--TGTYRWMAPEL 196
H D+K +N+LL+ D L DFG A + + L + ++T + GT MAPE+
Sbjct: 208 HGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEV 262
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 67/161 (41%), Gaps = 29/161 (18%)
Query: 28 VGPRIGEGAHAKVYEG--KYKNQTVAIKIVHK------GETPEE---------IAKKESR 70
VGP +G G VY G N VAIK V K GE P + K S
Sbjct: 13 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 72
Query: 71 FAREVAMLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGF 130
F+ + +L + + I EPV + + G L++ L A F
Sbjct: 73 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL------------ARSF 120
Query: 131 ALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFG 171
+ A+ H+ G++HRD+K EN+L+ + +KL DFG
Sbjct: 121 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 161
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 22/181 (12%)
Query: 32 IGEGAHAKVYEGK-YKNQTVAIKIVHKGETPEEIAKKESRFA-REVAMLSRVQHRNLVKF 89
IG G+ V++ K ++ VAIK V ++ RF RE+ ++ V+H N+V
Sbjct: 48 IGNGSFGVVFQAKLVESDEVAIKKV----------LQDKRFKNRELQIMRIVKHPNVVDL 97
Query: 90 I------GACKEPVMV-IVTELLSGGTLR--KYLLNMRPRCLDVCVAIGFALDIARAMEC 140
G K+ V + +V E + R ++ ++ + + + + + + R++
Sbjct: 98 KAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLK-QTMPMLLIKLYMYQLLRSLAY 156
Query: 141 LHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPELYSTV 200
+HS GI HRD+KP+NLLL +KL DFG A+ E + + + APEL
Sbjct: 157 IHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYRAPELIFGA 216
Query: 201 T 201
T
Sbjct: 217 T 217
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 67/161 (41%), Gaps = 29/161 (18%)
Query: 28 VGPRIGEGAHAKVYEG--KYKNQTVAIKIVHK------GETPEE---------IAKKESR 70
VGP +G G VY G N VAIK V K GE P + K S
Sbjct: 41 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 100
Query: 71 FAREVAMLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGF 130
F+ + +L + + I EPV + + G L++ L A F
Sbjct: 101 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL------------ARSF 148
Query: 131 ALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFG 171
+ A+ H+ G++HRD+K EN+L+ + +KL DFG
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 189
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 67/161 (41%), Gaps = 29/161 (18%)
Query: 28 VGPRIGEGAHAKVYEG--KYKNQTVAIKIVHK------GETPEE---------IAKKESR 70
VGP +G G VY G N VAIK V K GE P + K S
Sbjct: 55 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 114
Query: 71 FAREVAMLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGF 130
F+ + +L + + I EPV + + G L++ L A F
Sbjct: 115 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL------------ARSF 162
Query: 131 ALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFG 171
+ A+ H+ G++HRD+K EN+L+ + +KL DFG
Sbjct: 163 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 203
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 67/161 (41%), Gaps = 29/161 (18%)
Query: 28 VGPRIGEGAHAKVYEG--KYKNQTVAIKIVHK------GETPEE---------IAKKESR 70
VGP +G G VY G N VAIK V K GE P + K S
Sbjct: 40 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 99
Query: 71 FAREVAMLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGF 130
F+ + +L + + I EPV + + G L++ L A F
Sbjct: 100 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL------------ARSF 147
Query: 131 ALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFG 171
+ A+ H+ G++HRD+K EN+L+ + +KL DFG
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 188
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 67/161 (41%), Gaps = 29/161 (18%)
Query: 28 VGPRIGEGAHAKVYEG--KYKNQTVAIKIVHK------GETPEE---------IAKKESR 70
VGP +G G VY G N VAIK V K GE P + K S
Sbjct: 27 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 86
Query: 71 FAREVAMLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGF 130
F+ + +L + + I EPV + + G L++ L A F
Sbjct: 87 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL------------ARSF 134
Query: 131 ALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFG 171
+ A+ H+ G++HRD+K EN+L+ + +KL DFG
Sbjct: 135 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 175
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 67/161 (41%), Gaps = 29/161 (18%)
Query: 28 VGPRIGEGAHAKVYEG--KYKNQTVAIKIVHK------GETPEE---------IAKKESR 70
VGP +G G VY G N VAIK V K GE P + K S
Sbjct: 27 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 86
Query: 71 FAREVAMLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGF 130
F+ + +L + + I EPV + + G L++ L A F
Sbjct: 87 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL------------ARSF 134
Query: 131 ALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFG 171
+ A+ H+ G++HRD+K EN+L+ + +KL DFG
Sbjct: 135 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 175
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 67/161 (41%), Gaps = 29/161 (18%)
Query: 28 VGPRIGEGAHAKVYEG--KYKNQTVAIKIVHK------GETPEE---------IAKKESR 70
VGP +G G VY G N VAIK V K GE P + K S
Sbjct: 41 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 100
Query: 71 FAREVAMLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGF 130
F+ + +L + + I EPV + + G L++ L A F
Sbjct: 101 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL------------ARSF 148
Query: 131 ALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFG 171
+ A+ H+ G++HRD+K EN+L+ + +KL DFG
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 189
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 67/161 (41%), Gaps = 29/161 (18%)
Query: 28 VGPRIGEGAHAKVYEG--KYKNQTVAIKIVHK------GETPEE---------IAKKESR 70
VGP +G G VY G N VAIK V K GE P + K S
Sbjct: 41 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 100
Query: 71 FAREVAMLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGF 130
F+ + +L + + I EPV + + G L++ L A F
Sbjct: 101 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL------------ARSF 148
Query: 131 ALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFG 171
+ A+ H+ G++HRD+K EN+L+ + +KL DFG
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 189
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 67/161 (41%), Gaps = 29/161 (18%)
Query: 28 VGPRIGEGAHAKVYEG--KYKNQTVAIKIVHK------GETPEE---------IAKKESR 70
VGP +G G VY G N VAIK V K GE P + K S
Sbjct: 40 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 99
Query: 71 FAREVAMLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGF 130
F+ + +L + + I EPV + + G L++ L A F
Sbjct: 100 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL------------ARSF 147
Query: 131 ALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFG 171
+ A+ H+ G++HRD+K EN+L+ + +KL DFG
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 188
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 60/114 (52%), Gaps = 13/114 (11%)
Query: 73 REVAMLSRVQHRNLVKFI------GACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCV 126
RE+ ++ R+ H N+VK G+ + +TEL S +++Y+ L+
Sbjct: 57 REIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGP 116
Query: 127 AIG-----FALDIARAMECLHSHGIIHRDLKPENLLL-TEDLKTIKLADFGLAR 174
+ F + R ++ +HS ++HRDLKP NL + TEDL +K+ DFGLAR
Sbjct: 117 LLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDL-VLKIGDFGLAR 169
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 67/161 (41%), Gaps = 29/161 (18%)
Query: 28 VGPRIGEGAHAKVYEG--KYKNQTVAIKIVHK------GETPEE---------IAKKESR 70
VGP +G G VY G N VAIK V K GE P + K S
Sbjct: 12 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 71
Query: 71 FAREVAMLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGF 130
F+ + +L + + I EPV + + G L++ L A F
Sbjct: 72 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL------------ARSF 119
Query: 131 ALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFG 171
+ A+ H+ G++HRD+K EN+L+ + +KL DFG
Sbjct: 120 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 160
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 67/161 (41%), Gaps = 29/161 (18%)
Query: 28 VGPRIGEGAHAKVYEG--KYKNQTVAIKIVHK------GETPEE---------IAKKESR 70
VGP +G G VY G N VAIK V K GE P + K S
Sbjct: 28 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 87
Query: 71 FAREVAMLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGF 130
F+ + +L + + I EPV + + G L++ L A F
Sbjct: 88 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL------------ARSF 135
Query: 131 ALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFG 171
+ A+ H+ G++HRD+K EN+L+ + +KL DFG
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 176
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 67/161 (41%), Gaps = 29/161 (18%)
Query: 28 VGPRIGEGAHAKVYEG--KYKNQTVAIKIVHK------GETPEE---------IAKKESR 70
VGP +G G VY G N VAIK V K GE P + K S
Sbjct: 40 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 99
Query: 71 FAREVAMLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGF 130
F+ + +L + + I EPV + + G L++ L A F
Sbjct: 100 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL------------ARSF 147
Query: 131 ALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFG 171
+ A+ H+ G++HRD+K EN+L+ + +KL DFG
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 188
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 67/161 (41%), Gaps = 29/161 (18%)
Query: 28 VGPRIGEGAHAKVYEG--KYKNQTVAIKIVHK------GETPEE---------IAKKESR 70
VGP +G G VY G N VAIK V K GE P + K S
Sbjct: 41 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 100
Query: 71 FAREVAMLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGF 130
F+ + +L + + I EPV + + G L++ L A F
Sbjct: 101 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL------------ARSF 148
Query: 131 ALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFG 171
+ A+ H+ G++HRD+K EN+L+ + +KL DFG
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 189
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 67/161 (41%), Gaps = 29/161 (18%)
Query: 28 VGPRIGEGAHAKVYEG--KYKNQTVAIKIVHK------GETPEE---------IAKKESR 70
VGP +G G VY G N VAIK V K GE P + K S
Sbjct: 13 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 72
Query: 71 FAREVAMLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGF 130
F+ + +L + + I EPV + + G L++ L A F
Sbjct: 73 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL------------ARSF 120
Query: 131 ALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFG 171
+ A+ H+ G++HRD+K EN+L+ + +KL DFG
Sbjct: 121 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 161
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 67/161 (41%), Gaps = 29/161 (18%)
Query: 28 VGPRIGEGAHAKVYEG--KYKNQTVAIKIVHK------GETPEE---------IAKKESR 70
VGP +G G VY G N VAIK V K GE P + K S
Sbjct: 28 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 87
Query: 71 FAREVAMLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGF 130
F+ + +L + + I EPV + + G L++ L A F
Sbjct: 88 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL------------ARSF 135
Query: 131 ALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFG 171
+ A+ H+ G++HRD+K EN+L+ + +KL DFG
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 176
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 67/161 (41%), Gaps = 29/161 (18%)
Query: 28 VGPRIGEGAHAKVYEG--KYKNQTVAIKIVHK------GETPEE---------IAKKESR 70
VGP +G G VY G N VAIK V K GE P + K S
Sbjct: 55 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 114
Query: 71 FAREVAMLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGF 130
F+ + +L + + I EPV + + G L++ L A F
Sbjct: 115 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL------------ARSF 162
Query: 131 ALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFG 171
+ A+ H+ G++HRD+K EN+L+ + +KL DFG
Sbjct: 163 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 203
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 67/161 (41%), Gaps = 29/161 (18%)
Query: 28 VGPRIGEGAHAKVYEG--KYKNQTVAIKIVHK------GETPEE---------IAKKESR 70
VGP +G G VY G N VAIK V K GE P + K S
Sbjct: 47 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 106
Query: 71 FAREVAMLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGF 130
F+ + +L + + I EPV + + G L++ L A F
Sbjct: 107 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL------------ARSF 154
Query: 131 ALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFG 171
+ A+ H+ G++HRD+K EN+L+ + +KL DFG
Sbjct: 155 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 195
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 67/161 (41%), Gaps = 29/161 (18%)
Query: 28 VGPRIGEGAHAKVYEG--KYKNQTVAIKIVHK------GETPEE---------IAKKESR 70
VGP +G G VY G N VAIK V K GE P + K S
Sbjct: 40 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 99
Query: 71 FAREVAMLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGF 130
F+ + +L + + I EPV + + G L++ L A F
Sbjct: 100 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL------------ARSF 147
Query: 131 ALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFG 171
+ A+ H+ G++HRD+K EN+L+ + +KL DFG
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 188
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 67/161 (41%), Gaps = 29/161 (18%)
Query: 28 VGPRIGEGAHAKVYEG--KYKNQTVAIKIVHK------GETPEE---------IAKKESR 70
VGP +G G VY G N VAIK V K GE P + K S
Sbjct: 12 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 71
Query: 71 FAREVAMLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGF 130
F+ + +L + + I EPV + + G L++ L A F
Sbjct: 72 FSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEEL------------ARSF 119
Query: 131 ALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFG 171
+ A+ H+ G++HRD+K EN+L+ + +KL DFG
Sbjct: 120 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 160
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 67/161 (41%), Gaps = 29/161 (18%)
Query: 28 VGPRIGEGAHAKVYEG--KYKNQTVAIKIVHK------GETPEE---------IAKKESR 70
VGP +G G VY G N VAIK V K GE P + K S
Sbjct: 13 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 72
Query: 71 FAREVAMLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGF 130
F+ + +L + + I EPV + + G L++ L A F
Sbjct: 73 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL------------ARSF 120
Query: 131 ALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFG 171
+ A+ H+ G++HRD+K EN+L+ + +KL DFG
Sbjct: 121 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 161
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 67/161 (41%), Gaps = 29/161 (18%)
Query: 28 VGPRIGEGAHAKVYEG--KYKNQTVAIKIVHK------GETPEE---------IAKKESR 70
VGP +G G VY G N VAIK V K GE P + K S
Sbjct: 8 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 67
Query: 71 FAREVAMLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGF 130
F+ + +L + + I EPV + + G L++ L A F
Sbjct: 68 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL------------ARSF 115
Query: 131 ALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFG 171
+ A+ H+ G++HRD+K EN+L+ + +KL DFG
Sbjct: 116 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 156
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 67/161 (41%), Gaps = 29/161 (18%)
Query: 28 VGPRIGEGAHAKVYEG--KYKNQTVAIKIVHK------GETPEE---------IAKKESR 70
VGP +G G VY G N VAIK V K GE P + K S
Sbjct: 8 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 67
Query: 71 FAREVAMLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGF 130
F+ + +L + + I EPV + + G L++ L A F
Sbjct: 68 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL------------ARSF 115
Query: 131 ALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFG 171
+ A+ H+ G++HRD+K EN+L+ + +KL DFG
Sbjct: 116 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 156
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 67/161 (41%), Gaps = 29/161 (18%)
Query: 28 VGPRIGEGAHAKVYEG--KYKNQTVAIKIVHK------GETPEE---------IAKKESR 70
VGP +G G VY G N VAIK V K GE P + K S
Sbjct: 11 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 70
Query: 71 FAREVAMLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGF 130
F+ + +L + + I EPV + + G L++ L A F
Sbjct: 71 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL------------ARSF 118
Query: 131 ALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFG 171
+ A+ H+ G++HRD+K EN+L+ + +KL DFG
Sbjct: 119 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 159
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 67/161 (41%), Gaps = 29/161 (18%)
Query: 28 VGPRIGEGAHAKVYEG--KYKNQTVAIKIVHK------GETPEE---------IAKKESR 70
VGP +G G VY G N VAIK V K GE P + K S
Sbjct: 28 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 87
Query: 71 FAREVAMLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGF 130
F+ + +L + + I EPV + + G L++ L A F
Sbjct: 88 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL------------ARSF 135
Query: 131 ALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFG 171
+ A+ H+ G++HRD+K EN+L+ + +KL DFG
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 176
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 67/161 (41%), Gaps = 29/161 (18%)
Query: 28 VGPRIGEGAHAKVYEG--KYKNQTVAIKIVHK------GETPEE---------IAKKESR 70
VGP +G G VY G N VAIK V K GE P + K S
Sbjct: 35 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 94
Query: 71 FAREVAMLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGF 130
F+ + +L + + I EPV + + G L++ L A F
Sbjct: 95 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL------------ARSF 142
Query: 131 ALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFG 171
+ A+ H+ G++HRD+K EN+L+ + +KL DFG
Sbjct: 143 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 183
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 88/181 (48%), Gaps = 22/181 (12%)
Query: 28 VGPRIGEGAHAKVYEGK--YKNQTVAIKIVH-KGETPEEIAKKESRFAREVAMLSRVQHR 84
VG +IG G ++ GK Y N+ VAIK+ K P+ E RF +++ S +
Sbjct: 4 VGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQ--LHLEYRFYKQLG--SAGEGL 59
Query: 85 NLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
V + G + +V ELL G +L L ++ R + + A+ + ME +HS
Sbjct: 60 PQVYYFGPXGK-YNAMVLELL-GPSLED-LFDLCDRTFTLKTVLMIAIQLLSRMEYVHSK 116
Query: 145 GIIHRDLKPENLLL----TEDLKTIKLADFGLARE----ESLTEMMTAE----TGTYRWM 192
+I+RD+KPEN L+ + I + DFGLA+E E+ + E TGT R+M
Sbjct: 117 NLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYM 176
Query: 193 A 193
+
Sbjct: 177 S 177
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 67/161 (41%), Gaps = 29/161 (18%)
Query: 28 VGPRIGEGAHAKVYEG--KYKNQTVAIKIVHK------GETPEE---------IAKKESR 70
VGP +G G VY G N VAIK V K GE P + K S
Sbjct: 60 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 119
Query: 71 FAREVAMLSRVQHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGF 130
F+ + +L + + I EPV + + G L++ L A F
Sbjct: 120 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL------------ARSF 167
Query: 131 ALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFG 171
+ A+ H+ G++HRD+K EN+L+ + +KL DFG
Sbjct: 168 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 208
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 56/115 (48%), Gaps = 8/115 (6%)
Query: 85 NLVKFIGACKEPVM---VIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECL 141
N++K I K+PV +V E ++ ++ + D + + ++ +A++
Sbjct: 99 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQ----LYQILTDFDIRF-YMYELLKALDYC 153
Query: 142 HSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
HS GI+HRD+KP N+++ K ++L D+GLA + + + PEL
Sbjct: 154 HSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPEL 208
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 56/115 (48%), Gaps = 8/115 (6%)
Query: 85 NLVKFIGACKEPVM---VIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECL 141
N++K I K+PV +V E ++ ++ + D + + ++ +A++
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQ----LYQILTDFDIRF-YMYELLKALDYC 148
Query: 142 HSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
HS GI+HRD+KP N+++ K ++L D+GLA + + + PEL
Sbjct: 149 HSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPEL 203
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 57/102 (55%), Gaps = 7/102 (6%)
Query: 98 MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH-GIIHRDLKPENL 156
+ V E +GG L +L R R A + +I A++ LHS +++RDLK ENL
Sbjct: 223 LCFVMEYANGGELFFHL--SRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENL 280
Query: 157 LLTEDLKTIKLADFGLAREESLTEMMTAET--GTYRWMAPEL 196
+L +D IK+ DFGL + E + + T +T GT ++APE+
Sbjct: 281 MLDKD-GHIKITDFGLCK-EGIKDGATMKTFCGTPEYLAPEV 320
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 57/102 (55%), Gaps = 7/102 (6%)
Query: 98 MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH-GIIHRDLKPENL 156
+ V E +GG L +L R R A + +I A++ LHS +++RDLK ENL
Sbjct: 226 LCFVMEYANGGELFFHL--SRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENL 283
Query: 157 LLTEDLKTIKLADFGLAREESLTEMMTAET--GTYRWMAPEL 196
+L +D IK+ DFGL + E + + T +T GT ++APE+
Sbjct: 284 MLDKD-GHIKITDFGLCK-EGIKDGATMKTFCGTPEYLAPEV 323
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 68/130 (52%), Gaps = 12/130 (9%)
Query: 73 REVAMLSRVQHRNLVKF---IGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIG 129
+E+++L+ +HRN++ + +E VM+ E +SG + + + N L+ +
Sbjct: 50 KEISILNIARHRNILHLHESFESMEELVMIF--EFISGLDIFERI-NTSAFELNEREIVS 106
Query: 130 FALDIARAMECLHSHGIIHRDLKPENLLL-TEDLKTIKLADFGLAREESLTEMMTAETGT 188
+ + A++ LHSH I H D++PEN++ T TIK+ +FG AR ++ +
Sbjct: 107 YVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQAR-----QLKPGDNFR 161
Query: 189 YRWMAPELYS 198
+ APE Y+
Sbjct: 162 LLFTAPEYYA 171
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 89/196 (45%), Gaps = 25/196 (12%)
Query: 32 IGEGAHAKVYEGKYKN--QTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
IG G++ + + + K+ + + K + G E A+K+ EV +L ++H N+V++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTE--AEKQM-LVSEVNLLRELKHPNIVRY 70
Query: 90 ---IGACKEPVMVIVTELLSGGTLRKYLL--NMRPRCLDVCVAIGFALDIARAMECLH-- 142
I + IV E GG L + + LD + + A++ H
Sbjct: 71 YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR 130
Query: 143 ---SHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAE-TGTYRWMAPELYS 198
H ++HRDLKP N+ L + + +KL DFGLAR + E E GT +M+PE
Sbjct: 131 SDGGHTVLHRDLKPANVFL-DGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPE--- 186
Query: 199 TVTLRQGEKKHYNHKN 214
Q + YN K+
Sbjct: 187 -----QMNRMSYNEKS 197
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 82/169 (48%), Gaps = 12/169 (7%)
Query: 32 IGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+G G+ +V K+K A+KI+ K + + K+ E +L V LVK
Sbjct: 36 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKL 93
Query: 90 IGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
+ K+ + +V E ++GG + +L R A +A I E LHS +I+
Sbjct: 94 EFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 151
Query: 149 RDLKPENLLLTEDLKTIKLADFGLA-REESLTEMMTAETGTYRWMAPEL 196
RDLKPENLL+ E I++ DFG A R + T + GT ++APE+
Sbjct: 152 RDLKPENLLIDEQ-GYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 196
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 89/213 (41%), Gaps = 46/213 (21%)
Query: 32 IGEGAHAKVYEGK--YKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+G+GA +V + + ++ AIK + E +K S EV +L+ + H+ +V++
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTE------EKLSTILSEVMLLASLNHQYVVRY 67
Query: 90 IGAC--------------KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIA 135
A K+ + I E TL L++ I
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYD-LIHSENLNQQRDEYWRLFRQIL 126
Query: 136 RAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLARE--ESL-------------TE 180
A+ +HS GIIHRDLKP N+ + E + +K+ DFGLA+ SL ++
Sbjct: 127 EALSYIHSQGIIHRDLKPMNIFIDES-RNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 181 MMTAETGTYRWMAPELYSTVTLRQGEKKHYNHK 213
+T+ GT ++A E+ HYN K
Sbjct: 186 NLTSAIGTAMYVATEVLDGTG-------HYNEK 211
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 77/181 (42%), Gaps = 15/181 (8%)
Query: 21 IDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSR 80
ID K L ++ E ++++G+++ + +K++ + + +K F E L
Sbjct: 7 IDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVL---KVRDWSTRKSRDFNEECPRLRI 63
Query: 81 VQHRNLVKFIGACKEPVM---VIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARA 137
H N++ +GAC+ P ++T G+L L +D A+ FALD AR
Sbjct: 64 FSHPNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARG 123
Query: 138 MECLHS-HGIIHRD-LKPENLLLTEDLKT-IKLADFGLAREESLTEMMTAETGTYRWMAP 194
LH+ +I R L ++ + ED I AD + + A W+AP
Sbjct: 124 XAFLHTLEPLIPRHALNSRSVXIDEDXTARISXADVKFSFQSPGRXYAPA------WVAP 177
Query: 195 E 195
E
Sbjct: 178 E 178
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 80/168 (47%), Gaps = 10/168 (5%)
Query: 32 IGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+G G+ +V K+K A+KI+ K + + K+ E +L V LVK
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 90 IGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
+ K+ + +V E ++GG + +L R A +A I E LHS +I+
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 164
Query: 149 RDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
RDLKPENLL+ + I++ DFG A+ A GT ++APE+
Sbjct: 165 RDLKPENLLIDQQ-GYIQVTDFGFAKRVKGRTWXLA--GTPEYLAPEI 209
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 25/196 (12%)
Query: 32 IGEGAHAKVYEGKYKN--QTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
IG G++ + + + K+ + + K + G E A+K+ EV +L ++H N+V++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTE--AEKQM-LVSEVNLLRELKHPNIVRY 70
Query: 90 ---IGACKEPVMVIVTELLSGGTLRKYLL--NMRPRCLDVCVAIGFALDIARAMECLH-- 142
I + IV E GG L + + LD + + A++ H
Sbjct: 71 YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR 130
Query: 143 ---SHGIIHRDLKPENLLLTEDLKTIKLADFGLAR-EESLTEMMTAETGTYRWMAPELYS 198
H ++HRDLKP N+ L + + +KL DFGLAR T A GT +M+PE
Sbjct: 131 SDGGHTVLHRDLKPANVFL-DGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPE--- 186
Query: 199 TVTLRQGEKKHYNHKN 214
Q + YN K+
Sbjct: 187 -----QMNRMSYNEKS 197
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 12/169 (7%)
Query: 32 IGEGAHAKVYEGKY--KNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
IG G+ +V K+ A+KI+ K + + K+ E +L V LVK
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 90 IGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
+ K+ + +V E + GG + +L R A +A I E LHS +I+
Sbjct: 107 EFSFKDNSNLYMVMEYMPGGDMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 164
Query: 149 RDLKPENLLLTEDLKTIKLADFGLA-REESLTEMMTAETGTYRWMAPEL 196
RDLKPENLL+ + IK+ADFG A R + T + GT ++APE+
Sbjct: 165 RDLKPENLLIDQQ-GYIKVADFGFAKRVKGRTWXL---CGTPEYLAPEI 209
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 79/168 (47%), Gaps = 10/168 (5%)
Query: 32 IGEGAHAKVYEGKY--KNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
IG G+ +V K+ A+KI+ K + + K+ E +L V LVK
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 90 IGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
+ K+ + +V E + GG + +L R A +A I E LHS +I+
Sbjct: 107 EFSFKDNSNLYMVMEYMPGGDMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 164
Query: 149 RDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
RDLKPENLL+ + IK+ADFG A+ + GT ++APE+
Sbjct: 165 RDLKPENLLIDQQ-GYIKVADFGFAKR--VKGRTWXLCGTPEYLAPEI 209
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 89/213 (41%), Gaps = 46/213 (21%)
Query: 32 IGEGAHAKVYEGK--YKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+G+GA +V + + ++ AIK + E +K S EV +L+ + H+ +V++
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTE------EKLSTILSEVXLLASLNHQYVVRY 67
Query: 90 IGAC--------------KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIA 135
A K+ + I E TL L++ I
Sbjct: 68 YAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYD-LIHSENLNQQRDEYWRLFRQIL 126
Query: 136 RAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLARE--ESL-------------TE 180
A+ +HS GIIHR+LKP N+ + E + +K+ DFGLA+ SL ++
Sbjct: 127 EALSYIHSQGIIHRNLKPXNIFIDES-RNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 181 MMTAETGTYRWMAPELYSTVTLRQGEKKHYNHK 213
+T+ GT ++A E+ HYN K
Sbjct: 186 NLTSAIGTAXYVATEVLDGTG-------HYNEK 211
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 6/129 (4%)
Query: 69 SRFAREVAMLSRVQHRNLVKFIGAC-KEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVA 127
++ RE+ +L +V F GA + + I E + GG+L + L + ++
Sbjct: 59 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGK 118
Query: 128 IGFALDIARAMECL-HSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAET 186
+ A + R + L H I+HRD+KP N+L+ IKL DFG++ + + M +
Sbjct: 119 VSIA--VLRGLAYLREKHQIMHRDVKPSNILVNSR-GEIKLCDFGVSG-QLIDSMANSFV 174
Query: 187 GTYRWMAPE 195
GT +MAPE
Sbjct: 175 GTRSYMAPE 183
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 80/189 (42%), Gaps = 30/189 (15%)
Query: 28 VGPRIGEGAHAKVYEGKYKNQ--TVAIKIVHKGETPEEIAKKES-RFAREVAMLSRVQ-- 82
+GP +G+G V+ G VAIK++ + +S EVA+L +V
Sbjct: 35 LGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAG 94
Query: 83 --HRNLVKFIG--ACKEPVMVIVTELLSGGTLRKYLLNMRP------RCLDVCVAIGFAL 132
H +++ + +E M+++ L L Y+ P RC F
Sbjct: 95 GGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRC--------FFG 146
Query: 133 DIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFG---LAREESLTEMMTAETGTY 189
+ A++ HS G++HRD+K EN+L+ KL DFG L +E T+ GT
Sbjct: 147 QVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDF----DGTR 202
Query: 190 RWMAPELYS 198
+ PE S
Sbjct: 203 VYSPPEWIS 211
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 56/104 (53%), Gaps = 12/104 (11%)
Query: 98 MVIVTELLSGGTLRKYLLNM----RPRCLDVCVAIGFALDIARAMECLHSHGIIHRDLKP 153
+ V E ++GG L ++ + P A+ +A +IA + L S GII+RDLK
Sbjct: 96 LYFVMEYVNGGDLMYHIQQVGRFKEPH------AVFYAAEIAIGLFFLQSKGIIYRDLKL 149
Query: 154 ENLLLTEDLKTIKLADFGLAREESLTEMMTAE-TGTYRWMAPEL 196
+N++L + IK+ADFG+ +E + T GT ++APE+
Sbjct: 150 DNVMLDSE-GHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEI 192
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 56/104 (53%), Gaps = 12/104 (11%)
Query: 98 MVIVTELLSGGTLRKYLLNM----RPRCLDVCVAIGFALDIARAMECLHSHGIIHRDLKP 153
+ V E ++GG L ++ + P A+ +A +IA + L S GII+RDLK
Sbjct: 417 LYFVMEYVNGGDLMYHIQQVGRFKEPH------AVFYAAEIAIGLFFLQSKGIIYRDLKL 470
Query: 154 ENLLLTEDLKTIKLADFGLAREESLTEMMTAE-TGTYRWMAPEL 196
+N++L + IK+ADFG+ +E + T GT ++APE+
Sbjct: 471 DNVMLDSE-GHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEI 513
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 12/169 (7%)
Query: 32 IGEGAHAKVYEGKY--KNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
IG G+ +V K+ A+KI+ K + + K+ E +L V LVK
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 90 IGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
+ K+ + +V E + GG + +L R A +A I E LHS +I+
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 164
Query: 149 RDLKPENLLLTEDLKTIKLADFGLA-REESLTEMMTAETGTYRWMAPEL 196
RDLKPENLL+ + IK+ADFG A R + T + GT ++APE+
Sbjct: 165 RDLKPENLLIDQQ-GYIKVADFGFAKRVKGRTWXL---CGTPEYLAPEI 209
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%)
Query: 130 FALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAR 174
+ L++ +A++ +H GI+HRD+KP N L LK L DFGLA+
Sbjct: 122 YMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQ 166
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 78/153 (50%), Gaps = 13/153 (8%)
Query: 28 VGPRIGEGAHAKVYEGK--YKNQTVAIKIVH-KGETPEEIAKKESRFAREVAMLSRVQHR 84
+G +IG G+ ++Y G N+ VAIK+ + K + P+ + ES+ R + + + +
Sbjct: 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLY--ESKIYRILQGGTGIPN- 67
Query: 85 NLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSH 144
V++ G + V+V +LL G + L N R L + + A + +E +HS
Sbjct: 68 --VRWFG-VEGDYNVLVMDLL--GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK 122
Query: 145 GIIHRDLKPENLL--LTEDLKTIKLADFGLARE 175
+HRD+KP+N L L + + DFGLA++
Sbjct: 123 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKK 155
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 80/168 (47%), Gaps = 10/168 (5%)
Query: 32 IGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+G G+ +V K+K A+KI+ K + + K+ E +L V LVK
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKL 127
Query: 90 IGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
+ K+ + +V E ++GG + +L R A +A I E LHS +I+
Sbjct: 128 EFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 185
Query: 149 RDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
RDLKPENLL+ + I++ DFG A+ + GT ++APE+
Sbjct: 186 RDLKPENLLIDQQ-GYIQVTDFGFAKR--VKGATWTLCGTPEYLAPEI 230
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 82/169 (48%), Gaps = 12/169 (7%)
Query: 32 IGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+G G+ +V K+K A+KI+ K + + K+ E +L V LVK
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 90 IGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
+ K+ + +V E ++GG + +L R A +A I E LHS +I+
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 164
Query: 149 RDLKPENLLLTEDLKTIKLADFGLA-REESLTEMMTAETGTYRWMAPEL 196
RDLKPENLL+ + I++ DFG A R + T + GT ++APE+
Sbjct: 165 RDLKPENLLIDQQ-GYIQVTDFGFAKRVKGRTWXL---XGTPEYLAPEI 209
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 83/177 (46%), Gaps = 24/177 (13%)
Query: 32 IGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAML---SRVQHRNL 86
+G+G KV K K + A+KI+ K E I K+ EVA +RV +
Sbjct: 16 LGKGTFGKVILVKEKATGRYYAMKILKK----EVIVAKD-----EVAHTLTENRVLQNSR 66
Query: 87 VKFIGACKEPV-----MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECL 141
F+ A K + V E +GG L +L R R A + +I A++ L
Sbjct: 67 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHL--SRERVFSEDRARFYGAEIVSALDYL 124
Query: 142 HSH-GIIHRDLKPENLLLTEDLKTIKLADFGLAREE-SLTEMMTAETGTYRWMAPEL 196
HS +++RDLK ENL+L +D IK+ DFGL +E M GT ++APE+
Sbjct: 125 HSEKNVVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEV 180
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 73/157 (46%), Gaps = 22/157 (14%)
Query: 32 IGEGAHAKVYEGK--YKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQ-HRNLVK 88
+ EG A VYE + + A+K + E +K +EV + ++ H N+V+
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRLLSNEE-----EKNRAIIQEVCFMKKLSGHPNIVQ 90
Query: 89 FIGACK---------EPVMVIVTELLSGGTLRKYLLNMRPRCLDVC-VAIGFALDIARAM 138
F A + +++TEL G L ++L M R C + RA+
Sbjct: 91 FCSAASIGKEESDTGQAEFLLLTELCKG-QLVEFLKKMESRGPLSCDTVLKIFYQTCRAV 149
Query: 139 ECLHSHG--IIHRDLKPENLLLTEDLKTIKLADFGLA 173
+ +H IIHRDLK ENLLL+ + TIKL DFG A
Sbjct: 150 QHMHRQKPPIIHRDLKVENLLLS-NQGTIKLCDFGSA 185
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 82/169 (48%), Gaps = 12/169 (7%)
Query: 32 IGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+G G+ +V K+K A+KI+ K + + K+ E +L V LVK
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 90 IGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
+ K+ + +V E ++GG + +L R A +A I E LHS +I+
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 164
Query: 149 RDLKPENLLLTEDLKTIKLADFGLA-REESLTEMMTAETGTYRWMAPEL 196
RDLKPENLL+ + I++ DFG A R + T + GT ++APE+
Sbjct: 165 RDLKPENLLIDQQ-GYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 209
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 83/177 (46%), Gaps = 24/177 (13%)
Query: 32 IGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAML---SRVQHRNL 86
+G+G KV K K + A+KI+ K E I K+ EVA +RV +
Sbjct: 18 LGKGTFGKVILVKEKATGRYYAMKILKK----EVIVAKD-----EVAHTLTENRVLQNSR 68
Query: 87 VKFIGACKEPV-----MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECL 141
F+ A K + V E +GG L +L R R A + +I A++ L
Sbjct: 69 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHL--SRERVFSEDRARFYGAEIVSALDYL 126
Query: 142 HSH-GIIHRDLKPENLLLTEDLKTIKLADFGLAREE-SLTEMMTAETGTYRWMAPEL 196
HS +++RDLK ENL+L +D IK+ DFGL +E M GT ++APE+
Sbjct: 127 HSEKNVVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEV 182
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 78/157 (49%), Gaps = 15/157 (9%)
Query: 25 HLFVGPRIGEGAHAKVYEGK--YKNQTVAIKIV-HKGETPEEIAKKESRFAREVAMLSRV 81
H VG RIGEG+ ++EG NQ VAIK + + P+ + E R + +A + +
Sbjct: 10 HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQ--LRDEYRTYKLLAGCTGI 67
Query: 82 QHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECL 141
+ V + G +E + ++ L G +L LL++ R V A + ++ +
Sbjct: 68 PN---VYYFG--QEGLHNVLVIDLLGPSLED-LLDLCGRKFSVKTVAMAAKQMLARVQSI 121
Query: 142 HSHGIIHRDLKPENLLL----TEDLKTIKLADFGLAR 174
H +++RD+KP+N L+ +++ I + DFG+ +
Sbjct: 122 HEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 158
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 83/177 (46%), Gaps = 24/177 (13%)
Query: 32 IGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAML---SRVQHRNL 86
+G+G KV K K + A+KI+ K E I K+ EVA +RV +
Sbjct: 17 LGKGTFGKVILVKEKATGRYYAMKILKK----EVIVAKD-----EVAHTLTENRVLQNSR 67
Query: 87 VKFIGACKEPV-----MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECL 141
F+ A K + V E +GG L +L R R A + +I A++ L
Sbjct: 68 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHL--SRERVFSEDRARFYGAEIVSALDYL 125
Query: 142 HSH-GIIHRDLKPENLLLTEDLKTIKLADFGLAREE-SLTEMMTAETGTYRWMAPEL 196
HS +++RDLK ENL+L +D IK+ DFGL +E M GT ++APE+
Sbjct: 126 HSEKNVVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEV 181
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 82/169 (48%), Gaps = 12/169 (7%)
Query: 32 IGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+G G+ +V K+K A+KI+ K + + K+ E +L V LVK
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 90 IGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
+ K+ + +V E ++GG + +L R A +A I E LHS +I+
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 164
Query: 149 RDLKPENLLLTEDLKTIKLADFGLA-REESLTEMMTAETGTYRWMAPEL 196
RDLKPENLL+ + I++ DFG A R + T + GT ++APE+
Sbjct: 165 RDLKPENLLIDQQ-GYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 209
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 130 FALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLA-REESLTEMMTAETGT 188
+A I E LHS +I+RDLKPENLL+ + IK+ADFG A R + T + GT
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ-GYIKVADFGFAKRVKGRTWXL---CGT 202
Query: 189 YRWMAPEL 196
++APE+
Sbjct: 203 PEYLAPEI 210
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 82/169 (48%), Gaps = 12/169 (7%)
Query: 32 IGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+G G+ +V K+K A+KI+ K + + K+ E +L V LVK
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 90 IGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
+ K+ + +V E ++GG + +L R A +A I E LHS +I+
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 164
Query: 149 RDLKPENLLLTEDLKTIKLADFGLA-REESLTEMMTAETGTYRWMAPEL 196
RDLKPENLL+ + I++ DFG A R + T + GT ++APE+
Sbjct: 165 RDLKPENLLIDQQ-GYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 209
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 82/169 (48%), Gaps = 12/169 (7%)
Query: 32 IGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+G G+ +V K+K A+KI+ K + + K+ E +L V LVK
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 90 IGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
+ K+ + +V E ++GG + +L R A +A I E LHS +I+
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 164
Query: 149 RDLKPENLLLTEDLKTIKLADFGLA-REESLTEMMTAETGTYRWMAPEL 196
RDLKPENLL+ + I++ DFG A R + T + GT ++APE+
Sbjct: 165 RDLKPENLLIDQQ-GYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 209
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 82/169 (48%), Gaps = 12/169 (7%)
Query: 32 IGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+G G+ +V K+K A+KI+ K + + K+ E +L V LVK
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 90 IGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
+ K+ + +V E ++GG + +L R A +A I E LHS +I+
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 164
Query: 149 RDLKPENLLLTEDLKTIKLADFGLA-REESLTEMMTAETGTYRWMAPEL 196
RDLKPENLL+ + I++ DFG A R + T + GT ++APE+
Sbjct: 165 RDLKPENLLIDQQ-GYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 209
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 82/169 (48%), Gaps = 12/169 (7%)
Query: 32 IGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+G G+ +V K+K A+KI+ K + + K+ E +L V LVK
Sbjct: 50 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 90 IGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
+ K+ + +V E ++GG + +L R A +A I E LHS +I+
Sbjct: 108 EFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 165
Query: 149 RDLKPENLLLTEDLKTIKLADFGLA-REESLTEMMTAETGTYRWMAPEL 196
RDLKPENLL+ + I++ DFG A R + T + GT ++APE+
Sbjct: 166 RDLKPENLLIDQQ-GYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 210
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%)
Query: 130 FALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ ++ +A++ HS GI+HRD+KP N+++ +L+ ++L D+GLA + +
Sbjct: 130 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 189
Query: 190 RWMAPEL 196
+ PEL
Sbjct: 190 YFKGPEL 196
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%)
Query: 130 FALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ ++ +A++ HS GI+HRD+KP N+++ +L+ ++L D+GLA + +
Sbjct: 130 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 189
Query: 190 RWMAPEL 196
+ PEL
Sbjct: 190 YFKGPEL 196
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%)
Query: 130 FALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ ++ +A++ HS GI+HRD+KP N+++ +L+ ++L D+GLA + +
Sbjct: 130 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 189
Query: 190 RWMAPEL 196
+ PEL
Sbjct: 190 YFKGPEL 196
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 78/157 (49%), Gaps = 15/157 (9%)
Query: 25 HLFVGPRIGEGAHAKVYEGK--YKNQTVAIKIV-HKGETPEEIAKKESRFAREVAMLSRV 81
H VG RIGEG+ ++EG NQ VAIK + + P+ + E R + +A + +
Sbjct: 11 HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQ--LRDEYRTYKLLAGCTGI 68
Query: 82 QHRNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECL 141
+ V + G +E + ++ L G +L LL++ R V A + ++ +
Sbjct: 69 PN---VYYFG--QEGLHNVLVIDLLGPSLED-LLDLCGRKFSVKTVAMAAKQMLARVQSI 122
Query: 142 HSHGIIHRDLKPENLLL----TEDLKTIKLADFGLAR 174
H +++RD+KP+N L+ +++ I + DFG+ +
Sbjct: 123 HEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 159
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%)
Query: 130 FALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ ++ +A++ HS GI+HRD+KP N+++ +L+ ++L D+GLA + +
Sbjct: 130 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 189
Query: 190 RWMAPEL 196
+ PEL
Sbjct: 190 YFKGPEL 196
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%)
Query: 130 FALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ ++ +A++ HS GI+HRD+KP N+++ +L+ ++L D+GLA + +
Sbjct: 132 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 191
Query: 190 RWMAPEL 196
+ PEL
Sbjct: 192 YFKGPEL 198
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 82/169 (48%), Gaps = 12/169 (7%)
Query: 32 IGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+G G+ +V K+K A+KI+ K + + K+ E +L V LVK
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 90 IGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
+ K+ + +V E ++GG + +L R A +A I E LHS +I+
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 164
Query: 149 RDLKPENLLLTEDLKTIKLADFGLA-REESLTEMMTAETGTYRWMAPEL 196
RDLKPENLL+ + I++ DFG A R + T + GT ++APE+
Sbjct: 165 RDLKPENLLIDQQ-GYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 209
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%)
Query: 130 FALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ ++ +A++ HS GI+HRD+KP N+++ +L+ ++L D+GLA + +
Sbjct: 130 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 189
Query: 190 RWMAPEL 196
+ PEL
Sbjct: 190 YFKGPEL 196
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 131 ALDIARAMECLHSH-GIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
A+ I +A+E LHS +IHRD+KP N+L+ L +K+ DFG++ + T + G
Sbjct: 159 AVSIVKALEHLHSKLSVIHRDVKPSNVLINA-LGQVKMCDFGISGYLVDSVAKTIDAGCK 217
Query: 190 RWMAPE 195
+MAPE
Sbjct: 218 PYMAPE 223
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%)
Query: 130 FALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ ++ +A++ HS GI+HRD+KP N+++ +L+ ++L D+GLA + +
Sbjct: 151 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 210
Query: 190 RWMAPEL 196
+ PEL
Sbjct: 211 YFKGPEL 217
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%)
Query: 130 FALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ ++ +A++ HS GI+HRD+KP N+++ +L+ ++L D+GLA + +
Sbjct: 131 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 190
Query: 190 RWMAPEL 196
+ PEL
Sbjct: 191 YFKGPEL 197
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%)
Query: 130 FALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ ++ +A++ HS GI+HRD+KP N+++ +L+ ++L D+GLA + +
Sbjct: 130 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 189
Query: 190 RWMAPEL 196
+ PEL
Sbjct: 190 YFKGPEL 196
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 87/196 (44%), Gaps = 25/196 (12%)
Query: 32 IGEGAHAKVYEGKYKN--QTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
IG G++ + + + K+ + + K + G E A+K+ EV +L ++H N+V++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTE--AEKQM-LVSEVNLLRELKHPNIVRY 70
Query: 90 ---IGACKEPVMVIVTELLSGGTLRKYLL--NMRPRCLDVCVAIGFALDIARAMECLH-- 142
I + IV E GG L + + LD + + A++ H
Sbjct: 71 YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR 130
Query: 143 ---SHGIIHRDLKPENLLLTEDLKTIKLADFGLAR-EESLTEMMTAETGTYRWMAPELYS 198
H ++HRDLKP N+ L + + +KL DFGLAR T GT +M+PE
Sbjct: 131 SDGGHTVLHRDLKPANVFL-DGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPE--- 186
Query: 199 TVTLRQGEKKHYNHKN 214
Q + YN K+
Sbjct: 187 -----QMNRMSYNEKS 197
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 7/169 (4%)
Query: 32 IGEGAHAKVYEGKYKN--QTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
IG GA +V K KN + A+KI++K E + R R+V + Q + +
Sbjct: 98 IGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHY 157
Query: 90 IGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIHR 149
E + +V + GG L L + L +A + ++ A++ +H +HR
Sbjct: 158 -AFQDENHLYLVMDYYVGGDLLTLLSKFEDK-LPEDMARFYIGEMVLAIDSIHQLHYVHR 215
Query: 150 DLKPENLLLTEDLKTIKLADFG--LAREESLTEMMTAETGTYRWMAPEL 196
D+KP+N+LL + I+LADFG L + T + GT +++PE+
Sbjct: 216 DIKPDNVLLDVN-GHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEI 263
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 7/169 (4%)
Query: 32 IGEGAHAKVYEGKYKN--QTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
IG GA +V K KN + A+KI++K E + R R+V + Q + +
Sbjct: 82 IGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHY 141
Query: 90 IGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIHR 149
E + +V + GG L L + L +A + ++ A++ +H +HR
Sbjct: 142 -AFQDENHLYLVMDYYVGGDLLTLLSKFEDK-LPEDMARFYIGEMVLAIDSIHQLHYVHR 199
Query: 150 DLKPENLLLTEDLKTIKLADFG--LAREESLTEMMTAETGTYRWMAPEL 196
D+KP+N+LL + I+LADFG L + T + GT +++PE+
Sbjct: 200 DIKPDNVLLDVN-GHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEI 247
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%)
Query: 130 FALDIARAMECLHSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTY 189
+ ++ +A++ HS GI+HRD+KP N+++ +L+ ++L D+GLA + +
Sbjct: 131 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 190
Query: 190 RWMAPEL 196
+ PEL
Sbjct: 191 YFKGPEL 197
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 82/169 (48%), Gaps = 12/169 (7%)
Query: 32 IGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+G G+ +V K+K A+KI+ K + + K+ E +L V LVK
Sbjct: 44 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKL 101
Query: 90 IGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
+ K+ + +V E ++GG + +L R A +A I E LHS +I+
Sbjct: 102 EFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIY 159
Query: 149 RDLKPENLLLTEDLKTIKLADFGLA-REESLTEMMTAETGTYRWMAPEL 196
RDLKPENLL+ + I++ DFG A R + T + GT ++APE+
Sbjct: 160 RDLKPENLLIDQQ-GYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 204
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 82/169 (48%), Gaps = 12/169 (7%)
Query: 32 IGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+G G+ +V K+K A+KI+ K + + K+ E +L V LVK
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 90 IGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
+ K+ + +V E ++GG + +L R A +A I E LHS +I+
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIY 164
Query: 149 RDLKPENLLLTEDLKTIKLADFGLA-REESLTEMMTAETGTYRWMAPEL 196
RDLKPENLL+ + I++ DFG A R + T + GT ++APE+
Sbjct: 165 RDLKPENLLIDQQ-GYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 209
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 82/169 (48%), Gaps = 12/169 (7%)
Query: 32 IGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+G G+ +V K+K A+KI+ K + + K+ E +L V LVK
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 90 IGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
+ K+ + +V E ++GG + +L R A +A I E LHS +I+
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIY 164
Query: 149 RDLKPENLLLTEDLKTIKLADFGLA-REESLTEMMTAETGTYRWMAPEL 196
RDLKPENLL+ + I++ DFG A R + T + GT ++APE+
Sbjct: 165 RDLKPENLLIDQQ-GYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 209
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 82/169 (48%), Gaps = 12/169 (7%)
Query: 32 IGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+G G+ +V K+K A+KI+ K + + K+ E +L V LVK
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 90 IGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
+ K+ + +V E ++GG + +L R A +A I E LHS +I+
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIY 164
Query: 149 RDLKPENLLLTEDLKTIKLADFGLA-REESLTEMMTAETGTYRWMAPEL 196
RDLKPENLL+ + I++ DFG A R + T + GT ++APE+
Sbjct: 165 RDLKPENLLIDQQ-GYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 209
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 82/169 (48%), Gaps = 12/169 (7%)
Query: 32 IGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+G G+ +V K+K A+KI+ K + + K+ E +L V LVK
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKL 127
Query: 90 IGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
+ K+ + +V E ++GG + +L R A +A I E LHS +I+
Sbjct: 128 EFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIY 185
Query: 149 RDLKPENLLLTEDLKTIKLADFGLA-REESLTEMMTAETGTYRWMAPEL 196
RDLKPENLL+ + I++ DFG A R + T + GT ++APE+
Sbjct: 186 RDLKPENLLIDQQ-GYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 230
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 12/169 (7%)
Query: 32 IGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+G G+ +V K+K A+KI+ K + + K+ E +L V LVK
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKL 99
Query: 90 IGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
+ K+ + +V E + GG + +L R A +A I E LHS +I+
Sbjct: 100 EFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 157
Query: 149 RDLKPENLLLTEDLKTIKLADFGLA-REESLTEMMTAETGTYRWMAPEL 196
RDLKPENLL+ + I++ DFG A R + T + GT ++APE+
Sbjct: 158 RDLKPENLLIDQQ-GYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 202
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 8/115 (6%)
Query: 85 NLVKFIGACKEPVM---VIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECL 141
N++ K+PV +V E ++ ++ +R D + + +I +A++
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ----LRQTLTDYDIRF-YMYEILKALDYC 147
Query: 142 HSHGIIHRDLKPENLLLTEDLKTIKLADFGLAREESLTEMMTAETGTYRWMAPEL 196
HS GI+HRD+KP N+++ + + ++L D+GLA + + + PEL
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 8/173 (4%)
Query: 32 IGEGAHAKVYE--GKYKNQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
IG+G + V + Q A+KIV + RE ++ ++H ++V+
Sbjct: 32 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 90 IGA-CKEPVMVIVTELLSGGTLRKYLLNMRPRCL--DVCVAIGFALDIARAMECLHSHGI 146
+ + ++ +V E + G L ++ VA + I A+ H + I
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNI 151
Query: 147 IHRDLKPENLLLT--EDLKTIKLADFGLAREESLTEMMT-AETGTYRWMAPEL 196
IHRD+KP +LL E+ +KL FG+A + + ++ GT +MAPE+
Sbjct: 152 IHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEV 204
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 82/169 (48%), Gaps = 12/169 (7%)
Query: 32 IGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+G G+ +V K+K A+KI+ K + + K+ E +L V LVK
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 90 IGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
+ K+ + +V E ++GG + +L R A +A I E LHS +I+
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFAEPHARFYAAQIVLTFEYLHSLDLIY 164
Query: 149 RDLKPENLLLTEDLKTIKLADFGLA-REESLTEMMTAETGTYRWMAPEL 196
RDLKPENLL+ + I++ DFG A R + T + GT ++APE+
Sbjct: 165 RDLKPENLLIDQQ-GYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 209
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 12/169 (7%)
Query: 32 IGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+G G+ +V K+K A+KI+ K + + K+ E +L V LVK
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 90 IGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
+ K+ + +V E + GG + +L R A +A I E LHS +I+
Sbjct: 107 EYSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 164
Query: 149 RDLKPENLLLTEDLKTIKLADFGLA-REESLTEMMTAETGTYRWMAPEL 196
RDLKPENLL+ + I++ DFG A R + T + GT ++APE+
Sbjct: 165 RDLKPENLLIDQQ-GYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 209
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 85/183 (46%), Gaps = 10/183 (5%)
Query: 32 IGEGAHAKVYEGKYKN--QTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
IG GA +V K KN + A+KI++K E + R R+V + + + +
Sbjct: 82 IGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHY 141
Query: 90 IGACKEPVMVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIHR 149
+ + +V + GG L L R L +A + ++ A++ +H +HR
Sbjct: 142 AFQ-DDNNLYLVMDYYVGGDLLTLLSKFEDR-LPEEMARFYLAEMVIAIDSVHQLHYVHR 199
Query: 150 DLKPENLLLTEDLKTIKLADFG--LAREESLTEMMTAETGTYRWMAPELYSTVTLRQGEK 207
D+KP+N+L+ + I+LADFG L E T + GT +++PE+ + +G K
Sbjct: 200 DIKPDNILMDMN-GHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAM---EGGK 255
Query: 208 KHY 210
Y
Sbjct: 256 GRY 258
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 12/169 (7%)
Query: 32 IGEGAHAKVYEGKYK--NQTVAIKIVHKGETPEEIAKKESRFAREVAMLSRVQHRNLVKF 89
+G G+ +V K+K A+KI+ K + + K+ E +L V LVK
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 90 IGACKEPV-MVIVTELLSGGTLRKYLLNMRPRCLDVCVAIGFALDIARAMECLHSHGIIH 148
+ K+ + +V E + GG + +L R A +A I E LHS +I+
Sbjct: 107 EYSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 164
Query: 149 RDLKPENLLLTEDLKTIKLADFGLA-REESLTEMMTAETGTYRWMAPEL 196
RDLKPENLL+ + I++ DFG A R + T + GT ++APE+
Sbjct: 165 RDLKPENLLIDQQ-GYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 209
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,648,294
Number of Sequences: 62578
Number of extensions: 392053
Number of successful extensions: 3594
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1015
Number of HSP's successfully gapped in prelim test: 96
Number of HSP's that attempted gapping in prelim test: 956
Number of HSP's gapped (non-prelim): 1454
length of query: 317
length of database: 14,973,337
effective HSP length: 99
effective length of query: 218
effective length of database: 8,778,115
effective search space: 1913629070
effective search space used: 1913629070
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)