BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021131
(317 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9CXT6|KDM8_MOUSE Lysine-specific demethylase 8 OS=Mus musculus GN=Kdm8 PE=2 SV=1
Length = 414
Score = 191 bits (485), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 108/278 (38%), Positives = 149/278 (53%), Gaps = 15/278 (5%)
Query: 39 IRAAEAARDLAWEQLHSGPWHSVLPVWRDAYSMACLHGA----KYHYRNGEFKEALRVLD 94
++A+EA D +WE+L++GPW V WR YS CL A + + EALRV D
Sbjct: 62 LQASEAVLDYSWEKLNTGPWRDVDKEWRRVYSFGCLLKALCLCQAPQKATTVVEALRVCD 121
Query: 95 MGVLMGGPVLRKDLDSAIETLSLKAREGENERFGEREANRLVSE-EFNTAKALQVLPNRS 153
MG+LMG +L L + L G+ G + + + + + A V+ R
Sbjct: 122 MGLLMGAAILEDILLKVVAVLQTHQLPGKQPARGPHQDQPATKKAKCDASPAPDVMLER- 180
Query: 154 LSCKLVVKRSALSLEGFLSEYFLSGSPVIITDCMAHWPARTNWNDLDYLKRVAGDRTVPV 213
+V + L+ F + + G PVI+ HWP W+ L Y++ +AG RTVPV
Sbjct: 181 ----MVPRLRCPPLQYFKQHFLVPGRPVILEGVADHWPCMKKWS-LQYIQEIAGCRTVPV 235
Query: 214 EVGKNYLCQDWKQELIPFSQFLERIQSNGSSASVPTYLAQHQLFDQINELRNDICIPDYC 273
EVG Y +DW Q L+ +F+++ S A YLAQHQLFDQI EL+ DI IPDYC
Sbjct: 236 EVGSRYTDEDWSQTLMTVDEFIQKFIL--SEAKDVGYLAQHQLFDQIPELKRDISIPDYC 293
Query: 274 FVGGGELR--SLNAWFGPAGTVTPLHHDPHHNILAQYL 309
+G GE ++NAWFGP GT++PLH DP N L Q L
Sbjct: 294 CLGNGEEEEITINAWFGPQGTISPLHQDPQQNFLVQVL 331
>sp|B5XF11|KDM8_SALSA Lysine-specific demethylase 8 OS=Salmo salar GN=kdm8 PE=2 SV=1
Length = 404
Score = 183 bits (464), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 106/279 (37%), Positives = 153/279 (54%), Gaps = 21/279 (7%)
Query: 42 AEAARDLAWEQLHSGPWHSVLPVWRDAYSMACLHGAKYHYRN----GEFKEALRVLDMGV 97
A+ D +WE+L++G W V WR YS CL R+ +EA+R D+G+
Sbjct: 53 AQIILDFSWEKLNTGTWRDVDKEWRCLYSYGCLFKVAALCRDDASPATVQEAIRTCDLGL 112
Query: 98 LMGGPVLRKDLDSAIETLS--LKAREGENERFGE-REANRLVSEEFNTAKALQVLPNRSL 154
LMG ++ L + ++ L ++ R E E A ++ + + Q L +
Sbjct: 113 LMGAAIMDNILQTFVKILQNEIRKRHSNEENLSEGVSAKKMKVDCVSVPVVKQALAVPRI 172
Query: 155 SCKLVVKRSALSLEGFLSEYFLSGSPVIITDCMAHWPARTN--WNDLDYLKRVAGDRTVP 212
C SLE F +Y PVI+ + HWPA N W+ ++YL+ VAG RTVP
Sbjct: 173 HCP--------SLESFKKDYLDPQKPVILEGIIDHWPAFKNHPWS-IEYLQTVAGCRTVP 223
Query: 213 VEVGKNYLCQDWKQELIPFSQFLERIQSNGSSASVPTYLAQHQLFDQINELRNDICIPDY 272
VEVG Y ++W Q L+ ++F++R ++S+ YLAQHQLFDQ+ EL++DI IPDY
Sbjct: 224 VEVGSRYTDEEWSQTLLTVNEFIDRYIVVKDASSL-GYLAQHQLFDQVPELKDDIRIPDY 282
Query: 273 CFVGGGELR--SLNAWFGPAGTVTPLHHDPHHNILAQYL 309
C +G GE ++NAWFGP GTV+PLH DP N LAQ +
Sbjct: 283 CCLGEGEEDDITINAWFGPGGTVSPLHQDPQQNFLAQVV 321
>sp|Q497B8|KDM8_RAT Lysine-specific demethylase 8 OS=Rattus norvegicus GN=Kdm8 PE=2
SV=1
Length = 414
Score = 182 bits (463), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 106/278 (38%), Positives = 145/278 (52%), Gaps = 15/278 (5%)
Query: 39 IRAAEAARDLAWEQLHSGPWHSVLPVWRDAYSMACLHGA----KYHYRNGEFKEALRVLD 94
++A+EA D +WE+L++GPW V WR YS CL + + EALRV D
Sbjct: 62 LQASEAVLDYSWEKLNTGPWRDVDKEWRRVYSFGCLLKTLCLCQAPQKATAVAEALRVCD 121
Query: 95 MGVLMGGPVLRKDLDSAIETLSLKAREGENERFGEREANRLVSEEFNTAKALQVLPNRSL 154
MG+LMG +L L L + G + + + A + P+ L
Sbjct: 122 MGLLMGAAILGDILLKVATVLQTHLLPRKQPACGPHQDQPATKKAKHDASST---PDVVL 178
Query: 155 SCKLVVKRSALSLEGFLSEYFLSGSPVIITDCMAHWPARTNWNDLDYLKRVAGDRTVPVE 214
+ V + L+ F + + G PVI+ HWP W+ L Y++ +AG RTVPVE
Sbjct: 179 D-REVPRLRCPPLQHFKKHFLVPGRPVILEGVADHWPCMKKWS-LQYIQEIAGCRTVPVE 236
Query: 215 VGKNYLCQDWKQELIPFSQFLER-IQSNGSSASVPTYLAQHQLFDQINELRNDICIPDYC 273
VG Y +DW Q L+ ++F+ + I S YLAQHQLFDQI EL+ DI IPDYC
Sbjct: 237 VGSRYTDEDWSQTLMTVNEFIHKYILSEAKDVG---YLAQHQLFDQIPELKQDISIPDYC 293
Query: 274 FVGGGELR--SLNAWFGPAGTVTPLHHDPHHNILAQYL 309
+G GE ++NAWFGP GT++PLH DP N L Q L
Sbjct: 294 CLGNGEEEEITINAWFGPQGTISPLHQDPQQNFLVQVL 331
>sp|Q8N371|KDM8_HUMAN Lysine-specific demethylase 8 OS=Homo sapiens GN=KDM8 PE=1 SV=1
Length = 416
Score = 181 bits (458), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 107/280 (38%), Positives = 152/280 (54%), Gaps = 20/280 (7%)
Query: 39 IRAAEAARDLAWEQLHSGPWHSVLPVWRDAYSMACLHGAKYHYRNGE----FKEALRVLD 94
++++E D +WE+L++G W V WR Y++ CL A + E ALRV D
Sbjct: 65 LQSSEVILDYSWEKLNTGTWQDVDKDWRRVYAIGCLLKALCLCQAPEDANTVAAALRVCD 124
Query: 95 MGVLMGGPVLRKDLDSAIETLSLKAREGENERFGEREANRLVSEEFNTAKALQ---VLPN 151
MG+LMG +L L L + G+R A + E+ T KA ++P+
Sbjct: 125 MGLLMGAAILGDILLKVAAIL-------QTHLPGKRPARGSLPEQPCTKKARADHGLIPD 177
Query: 152 RSLSCKLVVKRSALSLEGFLSEYFLSGSPVIITDCMAHWPARTNWNDLDYLKRVAGDRTV 211
L K V + SL+ F ++ + G PVI+ HWP W+ L+Y++ +AG RTV
Sbjct: 178 VKLE-KTVPRLHRPSLQHFREQFLVPGRPVILKGVADHWPCMQKWS-LEYIQEIAGCRTV 235
Query: 212 PVEVGKNYLCQDWKQELIPFSQFLERIQSNGSSASVPTYLAQHQLFDQINELRNDICIPD 271
PVEVG Y ++W Q L+ ++F+ + N YLAQHQLFDQI EL+ DI IPD
Sbjct: 236 PVEVGSRYTDEEWSQTLMTVNEFISKYIVNEPRDV--GYLAQHQLFDQIPELKQDISIPD 293
Query: 272 YCFVGGGELR--SLNAWFGPAGTVTPLHHDPHHNILAQYL 309
YC +G GE ++NAWFGP GT++PLH DP N L Q +
Sbjct: 294 YCSLGDGEEEEITINAWFGPQGTISPLHQDPQQNFLVQVM 333
>sp|A8E534|KDM8_DANRE Lysine-specific demethylase 8 OS=Danio rerio GN=kdm8 PE=2 SV=1
Length = 406
Score = 171 bits (434), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 109/288 (37%), Positives = 147/288 (51%), Gaps = 21/288 (7%)
Query: 33 AQAAADIRAAEAARDLAWEQLHSGPWHSVLPVWRDAYSMACL-------HGAKYHYRNGE 85
A A+ D +WE+L+ G W V WR YS CL HG +
Sbjct: 46 ADCPVSAERAQIIIDYSWEKLNIGTWRDVDKEWRRVYSYGCLFKVLSLCHG---NPPQNI 102
Query: 86 FKEALRVLDMGVLMGGPVLRKDLDSAIETLSLKAREGENERFGEREANRLVSEEFNTAKA 145
+EA+R DM +LMG ++ L + L K + + ER + + K+
Sbjct: 103 IQEAVRTCDMSLLMGAAIMDNILQRLVGILRNKIKTTCPNK-AERSEEPFSKKRKHDCKS 161
Query: 146 LQVLPNRSLSCKLVVKRSALSLEGFLSEYFLSGSPVIITDCMAHWPARTN--WNDLDYLK 203
VL K V + SLE F S++ PVII WPA T W+ +DYL+
Sbjct: 162 EPVLN----PTKEVPRIHCPSLERFRSDFLDPKKPVIIEGITDLWPAFTQHPWS-IDYLR 216
Query: 204 RVAGDRTVPVEVGKNYLCQDWKQELIPFSQFLERIQSNGSSASVPTYLAQHQLFDQINEL 263
VAG RTVP+EVG Y ++W Q+LI + F++R + V YLAQHQLFDQ+ EL
Sbjct: 217 TVAGCRTVPIEVGSKYTDEEWSQKLITVNDFIDRYITGTEEDGV-GYLAQHQLFDQVPEL 275
Query: 264 RNDICIPDYCFVGGGELR--SLNAWFGPAGTVTPLHHDPHHNILAQYL 309
+ DI IPDYC +G G+ ++NAWFGP GTV+PLH DP N LAQ +
Sbjct: 276 KEDIRIPDYCCLGEGDEDDITINAWFGPGGTVSPLHQDPQQNFLAQVV 323
>sp|B2GUS6|KDM8_XENTR Lysine-specific demethylase 8 OS=Xenopus tropicalis GN=kdm8 PE=2
SV=1
Length = 443
Score = 170 bits (430), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/342 (34%), Positives = 160/342 (46%), Gaps = 59/342 (17%)
Query: 15 RLLQTISEHGGYAYVGMAAQAAADIRAAEAARDLAWEQLHSGPWHSVLPVWRDAYSMACL 74
R+ + + E Y G Q A E D +WE+L++ W V WR YS CL
Sbjct: 31 RVEECVREAARCLYRGAIVQCGA---LGELLIDYSWEKLNARNWREVGREWRAVYSYGCL 87
Query: 75 HGA-KYHYRNGEFKEALRVLDMGVLMGGPVLRKDLDSAIETLSLKAREGENERFGEREAN 133
A G +EAL+V D+G+LMG ++ L I L A E + EA
Sbjct: 88 FRAVGLCSVTGSIEEALQVCDIGLLMGAEIMDNLLGRIISVLQRIAPSREETKL---EAE 144
Query: 134 RLVSE------------EFNTAKALQVLPNRS--------------------LSCKLVV- 160
R V E E + K+ + R + C LV
Sbjct: 145 RGVREPGLESSKLHSPGEHSNKKSFASVTGRKRIREGPEADFDPKGCSISEKVPCLLVPV 204
Query: 161 --------KRSALSLEGFLSEYFLSGSPVIITDCMAHWPARTNWNDLDYLKRVAGDRTVP 212
K SLE F Y + PV++ + HWP W+ ++Y++RVAG RTVP
Sbjct: 205 LDSETAIPKLHCPSLEHFRDHYLVPQKPVVLEGVIDHWPCLKKWS-VEYIQRVAGCRTVP 263
Query: 213 VEVGKNYLCQDWKQELIPFSQFLERI---QSNGSSASVPTYLAQHQLFDQINELRNDICI 269
VE+G Y +W Q L+ ++F+ + + NG YLAQHQLF+QI EL+ DICI
Sbjct: 264 VELGSRYTDAEWSQRLMTVNEFITKYILDKQNGIG-----YLAQHQLFEQIPELKEDICI 318
Query: 270 PDYCFVGGG--ELRSLNAWFGPAGTVTPLHHDPHHNILAQYL 309
PDYC +G + ++NAWFGPAGTV+PLH DP N LAQ +
Sbjct: 319 PDYCCLGEASEDEITINAWFGPAGTVSPLHQDPQQNFLAQIV 360
>sp|Q1JP61|KDM8_BOVIN Lysine-specific demethylase 8 OS=Bos taurus GN=KDM8 PE=2 SV=1
Length = 406
Score = 169 bits (427), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/292 (37%), Positives = 152/292 (52%), Gaps = 19/292 (6%)
Query: 27 AYVGMAAQAAADIRAAEAARDLAWEQLHSGPWHSVLPVWRDAYSMACLHGA----KYHYR 82
A + + Q ++ E D +WE+L++GPW V WR Y+ CL A +
Sbjct: 42 AELFLGGQRRECLQTCEVLLDYSWEKLNTGPWQHVDKDWRRVYAFGCLLKAVCLCEPPGD 101
Query: 83 NGEFKEALRVLDMGVLMGGPVLRKDLDSAIETLSLKAREGENERFGEREANRLVSEEFNT 142
AL+ DMG+LMG +L L L + A + G+R A E T
Sbjct: 102 AASVAAALKACDMGLLMGAAILGDIL------LKVAAVLQKYLLSGKRPAPGPSQEPPGT 155
Query: 143 AKALQV-LPNRSLSCKLVVKR-SALSLEGFLSEYFLSGSPVIITDCMAHWPARTNWNDLD 200
KA +P ++ + V R SL+ F + + G PVI+ HWP W+ L+
Sbjct: 156 KKARNDHVPIPDVTTERTVPRLHCPSLQYFKKHFLVPGRPVILEGVANHWPCMKKWS-LE 214
Query: 201 YLKRVAGDRTVPVEVGKNYLCQDWKQELIPFSQFLER-IQSNGSSASVPTYLAQHQLFDQ 259
Y++ VAG RTVPVEVG Y ++W Q L+ ++F+ + I+ YLAQHQLFDQ
Sbjct: 215 YIQEVAGCRTVPVEVGSRYTDEEWSQTLMTVNEFISKYIREEPKDIG---YLAQHQLFDQ 271
Query: 260 INELRNDICIPDYCFVGGGELR--SLNAWFGPAGTVTPLHHDPHHNILAQYL 309
I EL+ DI IPDYC +G GE ++NAWFGP GTV+PLH DP N LAQ +
Sbjct: 272 IPELKQDISIPDYCCLGDGEEEEITINAWFGPQGTVSPLHQDPQQNFLAQVM 323
>sp|Q55DF5|JMJCD_DICDI JmjC domain-containing protein D OS=Dictyostelium discoideum
GN=jcdD PE=4 SV=1
Length = 448
Score = 144 bits (362), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/158 (47%), Positives = 97/158 (61%), Gaps = 16/158 (10%)
Query: 166 SLEGFLSEYFLSGSPVIITDCMAHWPA--RTNWNDLDYLKRVAGDRTVPVEVGKNYLCQD 223
SL F +EY + G+P +I + M WP NW+DL+YLK VAG R VP+E+G NYL +
Sbjct: 208 SLNEFKNEYMIKGNPCVIENLMKEWPCFNERNWSDLNYLKNVAGSRLVPIEIGPNYLHEK 267
Query: 224 WKQELIPFSQFL-ERIQSNGSSASVPT--YLAQHQLFDQINELRNDICIPDYCFVGGG-- 278
KQ+LI F++F+ E I S S YLAQ +LF+QI +LRNDI IP+YC + G
Sbjct: 268 MKQKLINFNKFIDEYIISKNSDDDNDDIGYLAQTKLFEQIPQLRNDILIPEYCKIKIGCG 327
Query: 279 ---------ELRSLNAWFGPAGTVTPLHHDPHHNILAQ 307
+ +NAW GP GTVTPLH+DP HN L Q
Sbjct: 328 DDDNDNNKEDNVEINAWLGPKGTVTPLHYDPKHNFLCQ 365
>sp|Q54FG7|JMJCF_DICDI JmjC domain-containing protein F OS=Dictyostelium discoideum
GN=jcdF PE=4 SV=1
Length = 474
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 123/316 (38%), Gaps = 57/316 (18%)
Query: 43 EAARDLAWEQL-HSGPWHSVLPVWRDAYSMACLHGAKYHYRNGEFKEALRVLDMGVLMGG 101
E+ L W +L G W + R+++ M L G Y Y + + L + D +MG
Sbjct: 62 ESIYKLTWNKLLKQGGWEHI--CLRESFIMGQLAGITYWYTQNDLIKTLEICDQSFIMGA 119
Query: 102 PVLRKDLDSAIETLSLKAREGENERFGEREANRLVSEEFNTAKALQVLPN---RSLSCKL 158
P ++ L ++ LS ++ ++ E N +K + N + + C
Sbjct: 120 P--KELLLPIMDELS--KKQTTTTTSTSPTIPMILDENVNFSKFPIIDKNHEIKVIECGK 175
Query: 159 VVKRSALSLEGFLSEYFL-------SGSPVIITDCMAHWPARTNWNDLDYLKRVAGDRTV 211
++ S +L+E+ + + +P II +W W DL+Y G+R V
Sbjct: 176 NNGGASGSGGDYLNEFSIFKNQHLNTMTPCIIKGDANNWECINKWKDLNYFLSNHGNRIV 235
Query: 212 PVEVGKNYL------------------------CQDWKQELIPFSQFLERI--------Q 239
P+E+G N L DW ++L+ F+E
Sbjct: 236 PIELGHNKLDSKTKKQQQQQQTTTTTANNDNDNSIDWSEKLMKLKDFIEEYMIPSSKDND 295
Query: 240 SNGSSASVPTYLAQHQLFDQINELRNDICIPDYCFVGGG--------ELRSLNAWFGPAG 291
S + +S YLAQH L +Q+ L +D P + G E S + W G
Sbjct: 296 STATESSKVAYLAQHGLIEQLPSLLDDFKFPLFLQTTGDAKVHETEEEGISPHIWLGTGN 355
Query: 292 TVTPLHHDPHHNILAQ 307
T+TPLH D + N L Q
Sbjct: 356 TITPLHFDSYDNFLTQ 371
>sp|Q67XX3|FB252_ARATH F-box protein At5g06550 OS=Arabidopsis thaliana GN=At5g06550 PE=2
SV=1
Length = 502
Score = 52.0 bits (123), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 26/152 (17%)
Query: 159 VVKRSALSLEGFLSEYFLSGSPVIITDCMAHWPARTNWNDLDYLKRVAGDRTV---PVEV 215
+ + +S+E F++++ PV++ C+ WPA W+ DYL +V GD PVE+
Sbjct: 194 ITRVRGISVEDFITKFEEPNKPVLLEGCLDGWPAIEKWSR-DYLTKVVGDVEFAVGPVEM 252
Query: 216 G--KNYLCQDWKQELIPF----SQFLERIQSNGSSASVPTYLAQHQLFDQINELRNDICI 269
K + D +E P +F E++ S VP Y + LF + R
Sbjct: 253 KLEKYFRYSDGAREERPLYLFDPKFAEKVPVLDSEYDVPVYF-REDLFGVLGNER----- 306
Query: 270 PDYCFVGGGELRSLNAWFGPAGTVTPLHHDPH 301
PDY ++ GPAG+ + H DP+
Sbjct: 307 PDYRWII----------IGPAGSGSSFHIDPN 328
>sp|Q54CS7|JMJCE_DICDI JmjC domain-containing protein E OS=Dictyostelium discoideum
GN=jcdE PE=4 SV=2
Length = 353
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 71/159 (44%), Gaps = 25/159 (15%)
Query: 170 FLSEYFLSGSPVIITDCMAHWPARTNWNDLDYLKRVAGDRTVPVEVGKNYLC-------- 221
F EY PVIIT + +W A W+D DYL+ V D V V + + L
Sbjct: 41 FYREYVSQNKPVIITGLLENWKAYKEWSD-DYLENVMKDVEVTVSITNDGLADAVKPINE 99
Query: 222 QDWKQELI---PFS---QFLERIQSNGSSASVP----TYLAQHQ---LFDQINELRNDI- 267
D K E + PF +F E I+ + S+ Y Q+Q L + ++L NDI
Sbjct: 100 NDPKSERVFCKPFEKKIKFQEYIKHSKKSSKENKNKLAYYIQYQNNSLNVEYDKLLNDID 159
Query: 268 -CIPDYCFVG-GGELRSLNAWFGPAGTVTPLHHDPHHNI 304
+ D+ G + + N W G +V+ LH DP+ N+
Sbjct: 160 ESVIDFAKEAFGSNIDATNFWMGQDKSVSSLHQDPYENM 198
>sp|Q6GND3|JMD6A_XENLA Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6-A
OS=Xenopus laevis GN=jmjd6-a PE=2 SV=1
Length = 403
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 64/145 (44%), Gaps = 17/145 (11%)
Query: 165 LSLEGFLSEYFLSGSPVIITDCMAHWPARTNWNDLDYLKRVAGDRTVPVEVGKNYLCQDW 224
LS+E F+ Y PV+I + A WPA+ W L+ LKR R + G++
Sbjct: 54 LSIEEFIDRYEKPYKPVVIVNATADWPAQEKWT-LERLKRKY--RNQKFKCGEDNDGYSV 110
Query: 225 KQELIPFSQFLERIQSNGSSASVPTYL--AQHQLFDQINELRNDICIPDY----CFVGGG 278
K ++ + ++E G+ P Y+ + + + +L D +P Y F G
Sbjct: 111 KMKMKYYIDYME-----GTRDDSPLYIFDSSYGEHPKRKKLLEDYEVPKYFRDDLFQFAG 165
Query: 279 ELRSLN-AWF--GPAGTVTPLHHDP 300
E R WF GPA + T +H DP
Sbjct: 166 EKRRPPYRWFVMGPARSGTGIHIDP 190
>sp|P0C872|JMJD7_MOUSE JmjC domain-containing protein 7 OS=Mus musculus GN=Jmjd7 PE=2 SV=1
Length = 316
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 72/177 (40%), Gaps = 18/177 (10%)
Query: 144 KALQVLPN--RSLSCKLVVKR--SALSLEGFLSEYFLSGSPVIITDCMAHWPARTNWNDL 199
+ALQ P R L+ VV S F ++ P II + + HWPA W+ L
Sbjct: 11 RALQEFPAAARDLNVPRVVPYLDEPPSPLCFYRDWVCPNRPCIIRNALQHWPALQKWS-L 69
Query: 200 DYLKRVAGDRTVPVEVGKNYLCQDWK--------QELIPFSQFLERIQSNGSSASVPTYL 251
YL+ G V V V + + + +P S L+ ++ V Y+
Sbjct: 70 SYLRATVGSTEVSVAVTPDGYADAVRGDRFVMPAERRLPISHVLDVLEGRAQHPGV-LYV 128
Query: 252 AQH--QLFDQINELRNDI--CIPDYCFVGGGELRSLNAWFGPAGTVTPLHHDPHHNI 304
+ L ++ +L +DI +P G ++N W G A VT LH D + N+
Sbjct: 129 QKQCSNLPTELPQLLSDIESHVPWASESLGKMPDAVNFWLGDASAVTSLHKDHYENL 185
>sp|Q5ZHV5|JMJD4_CHICK JmjC domain-containing protein 4 OS=Gallus gallus GN=JMJD4 PE=2
SV=1
Length = 425
Score = 40.8 bits (94), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 64/170 (37%), Gaps = 38/170 (22%)
Query: 158 LVVKRSALSLEGFLSEYFLSGSPVIITDCMAH-WPARTNW------NDLDYLKRVAGDRT 210
+ K + + F +Y + P + ++ W +R NW D D+L + G+
Sbjct: 31 FIDKIESFTYSDFFRDYLIPNQPCVFSEKFTDGWGSRRNWVTWGGKPDFDHLLQEFGEAI 90
Query: 211 VPVEVGKNYLCQDWKQELIPFSQFL----ERIQSNGSSASVPTYLAQHQLF--------- 257
VPV +E +PF +++ E I++ S+ YL L
Sbjct: 91 VPVANCDVKEYNSNPKEQLPFKEYISYWKEYIKNGYRSSRGCLYLKDWHLSRAFPEQDVY 150
Query: 258 --------DQINELRNDICIPDYCFVGGGELRSLNAWFGPAGTVTPLHHD 299
D +NE + I + DY FV + GP G+ TP H D
Sbjct: 151 TTPVYFSSDWLNEYWDAIAVDDYRFV----------YMGPKGSWTPFHAD 190
>sp|Q55FB9|JMJCB_DICDI JmjC domain-containing protein B OS=Dictyostelium discoideum
GN=jcdB PE=4 SV=1
Length = 286
Score = 40.4 bits (93), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 55/145 (37%), Gaps = 12/145 (8%)
Query: 173 EYFLSGSPVIITDCMAHWPARTNWNDLDYLKRVAGDRTVPVEVGKNYLCQDWKQEL-IPF 231
+Y P+I T W A + WND +YL + G+ + V+V K +K + I F
Sbjct: 26 KYLNENEPIIFTKFSTDWEALSKWNDPNYLINIIGNDHI-VDVNKCSFGGYYKDIIKIKF 84
Query: 232 SQFLER----------IQSNGSSASVPTYLAQHQLFDQINELRNDICIPDYCFVGGGELR 281
S+F+ + + N YL ++F+ DI L
Sbjct: 85 SEFISKSINNQFDNFDLNGNKIKKVNKPYLRNFEMFEDFPIFEQDINCDIIFDKDKHNLI 144
Query: 282 SLNAWFGPAGTVTPLHHDPHHNILA 306
A+ G G+ T H D N++
Sbjct: 145 VKRAFIGSVGSATSFHIDTGDNLVT 169
>sp|P0C870|JMJD7_HUMAN JmjC domain-containing protein 7 OS=Homo sapiens GN=JMJD7 PE=2 SV=1
Length = 316
Score = 40.0 bits (92), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 60/149 (40%), Gaps = 18/149 (12%)
Query: 170 FLSEYFLSGSPVIITDCMAHWPARTNWNDLDYLKRVAGDRTVPVEV----------GKNY 219
F ++ P II + + HWPA W+ L Y + G V V V G +
Sbjct: 41 FYRDWVCPNRPCIIRNALQHWPALQKWS-LPYFRATVGSTEVSVAVTPDGYADAVRGDRF 99
Query: 220 LCQDWKQELIPFSQFLERIQSNGSSASVPTYLAQH--QLFDQINELRNDI--CIPDYCFV 275
+ + +P S L+ ++ V Y+ + L ++ +L D+ +P
Sbjct: 100 MMP--AERRLPLSFVLDVLEGRAQHPGV-LYVQKQCSNLPSELPQLLPDLESHVPWASEA 156
Query: 276 GGGELRSLNAWFGPAGTVTPLHHDPHHNI 304
G ++N W G A VT LH D + N+
Sbjct: 157 LGKMPDAVNFWLGEAAAVTSLHKDHYENL 185
>sp|Q6PFM0|JMJD6_DANRE Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6
OS=Danio rerio GN=jmjd6 PE=2 SV=2
Length = 403
Score = 38.5 bits (88), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 59/143 (41%), Gaps = 13/143 (9%)
Query: 165 LSLEGFLSEYFLSGSPVIITDCMAHWPARTNWNDLDYLKRVAGDRTVPVEVGKNYLCQDW 224
LS E F+ + PV++ + WPAR W L+ LKR R + G++
Sbjct: 54 LSPEEFIQRFEKPYKPVVLLNVEDSWPAREKWT-LERLKRKY--RNQKFKCGEDNDGYSV 110
Query: 225 KQELIPFSQFLERIQSNGSSASVPTYLAQHQLFDQINELRNDICIP-----DYCFVGGGE 279
K ++ + ++LE + + +H + +L D +P D G +
Sbjct: 111 KMKMKYYVEYLESTHDDSPLYIFDSSFGEHA---KRRKLLEDYQVPLFFRDDLFQFAGEK 167
Query: 280 LRSLNAWF--GPAGTVTPLHHDP 300
R WF GPA + T +H DP
Sbjct: 168 RRPPYRWFVMGPARSGTGIHIDP 190
>sp|Q7ZX37|JMD6B_XENLA Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6-B
OS=Xenopus laevis GN=jmjd6-b PE=2 SV=1
Length = 403
Score = 38.1 bits (87), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 67/167 (40%), Gaps = 13/167 (7%)
Query: 141 NTAKALQVLPNRSLSCKLVVKRSALSLEGFLSEYFLSGSPVIITDCMAHWPARTNWNDLD 200
N + + P+ L V + L+ E F+ Y PV+I + A WPA W L+
Sbjct: 30 NYCEVFSLNPSTVLDNVERVDAAQLTTEEFIERYEKPYKPVVIINATAGWPANEKWT-LE 88
Query: 201 YLKRVAGDRTVPVEVGKNYLCQDWKQELIPFSQFLERIQSNGSSASVPTYLAQHQLFDQI 260
LKR R + G++ K ++ + ++E + + + +H +I
Sbjct: 89 RLKRKY--RNQKFKCGEDNDGYSVKMKMKYYIDYMEGTRDDSPLYIFDSSYGEHPKRKKI 146
Query: 261 NELRNDICIPDY----CFVGGGELRSLN-AWF--GPAGTVTPLHHDP 300
E D +P Y F GE R WF GP + T +H DP
Sbjct: 147 LE---DYEVPKYFRDDLFQFTGEKRRPPYRWFVMGPPRSGTGIHIDP 190
>sp|Q8BLR9|HIF1N_MOUSE Hypoxia-inducible factor 1-alpha inhibitor OS=Mus musculus
GN=Hif1an PE=1 SV=2
Length = 349
Score = 37.4 bits (85), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 63/151 (41%), Gaps = 25/151 (16%)
Query: 180 PVIITDCMAHWPARTNWNDLDYLKRVAG--DRTVPVEVGKNYLCQDWKQ----------- 226
PV++TD +PA W DL+YL+ G D +V +L D K+
Sbjct: 61 PVVLTDTNLVYPA-LKW-DLEYLQENIGNGDFSVYSASTHKFLYYDEKKMGNFQNFKPRS 118
Query: 227 --ELIPFSQFLERIQSNGSSASVPTYLAQHQLFDQIN-ELRNDICIPDYCFV-------G 276
E I F +F+E++Q+ Q L D + ++ D ++ ++ G
Sbjct: 119 NREEIKFHEFVEKLQAIQQRGGEERLYLQQTLNDTVGRKIVMDFLGFNWNWINKQQGKRG 178
Query: 277 GGELRSLNAWFGPAGTVTPLHHDPHHNILAQ 307
G+L S G G VTP H+D N AQ
Sbjct: 179 WGQLTSNLLLIGMEGNVTPAHYDEQQNFFAQ 209
>sp|Q9H9V9|JMJD4_HUMAN JmjC domain-containing protein 4 OS=Homo sapiens GN=JMJD4 PE=2 SV=2
Length = 463
Score = 37.0 bits (84), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 62/170 (36%), Gaps = 38/170 (22%)
Query: 158 LVVKRSALSLEGFLSEYFLSGSPVIITDCMAH-WPARTNW------NDLDYLKRVAGDRT 210
V + A S F+ + L P + + W +R W D D+L R GD
Sbjct: 78 FVSEPGAFSYADFVRGFLLPNLPCVFSSAFTQGWGSRRRWVTPAGRPDFDHLLRTYGDVV 137
Query: 211 VPV-EVGKNYLCQDWKQELI---PFSQFLERIQSNGSSASVPTYLAQHQLF--------- 257
VPV G + K+ + + + E IQ+ SS YL L
Sbjct: 138 VPVANCGVQEYNSNPKEHMTLRDYITYWKEYIQAGYSSPRGCLYLKDWHLCRDFPVEDVF 197
Query: 258 --------DQINELRNDICIPDYCFVGGGELRSLNAWFGPAGTVTPLHHD 299
D +NE + + + DY FV + GPAG+ +P H D
Sbjct: 198 TLPVYFSSDWLNEFWDALDVDDYRFV----------YAGPAGSWSPFHAD 237
>sp|O94606|JMJ4_SCHPO JmjC domain-containing protein 4 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=jmj4 PE=1 SV=1
Length = 473
Score = 36.6 bits (83), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 69/178 (38%), Gaps = 22/178 (12%)
Query: 150 PNRSLSCKLVVKRSALSLEGFLSEYFLSGSPVIITDCM--AHWPARTNWNDLDYLKRVAG 207
P ++ + L+ + F ++ + +PVII + + W W DYL G
Sbjct: 12 PKHGDKVPVLQNLNDLTPKDFYDKFIATRTPVIIKSSLPESDWKGYL-WQQQDYLLSKIG 70
Query: 208 D---RTVPVEVGKNYLCQDWKQELIPFSQFLERIQSNGSSASVPTYLAQHQLFDQINELR 264
D + P++ Q + + +F +++++ Y +++ D +E+
Sbjct: 71 DIVCKVEPIDPVSGTFGQGMSRNEMSIKEFFQKLKNGERLYLTTQYDESNEVLDGDDEVS 130
Query: 265 ----------NDICIPDY----CFVGGGELRSLNAWFGPA--GTVTPLHHDPHHNILA 306
D + D+ +G + N W G + GT + LHHD H NI A
Sbjct: 131 LLVKSLCPHPTDGLLTDFSITPALMGNLVPQQCNLWIGKSENGTSSGLHHDFHDNIYA 188
>sp|Q9NWT6|HIF1N_HUMAN Hypoxia-inducible factor 1-alpha inhibitor OS=Homo sapiens
GN=HIF1AN PE=1 SV=2
Length = 349
Score = 35.8 bits (81), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 62/151 (41%), Gaps = 25/151 (16%)
Query: 180 PVIITDCMAHWPARTNWNDLDYLKRVAG--DRTVPVEVGKNYLCQDWKQ----------- 226
PV++TD +PA W DL+YL+ G D +V +L D K+
Sbjct: 61 PVVLTDTNLVYPA-LKW-DLEYLQENIGNGDFSVYSASTHKFLYYDEKKMANFQNFKPRS 118
Query: 227 --ELIPFSQFLERIQSNGSSASVPTYLAQHQLFDQIN-ELRNDICIPDYCFV-------G 276
E + F +F+E++Q Q L D + ++ D ++ ++ G
Sbjct: 119 NREEMKFHEFVEKLQDIQQRGGEERLYLQQTLNDTVGRKIVMDFLGFNWNWINKQQGKRG 178
Query: 277 GGELRSLNAWFGPAGTVTPLHHDPHHNILAQ 307
G+L S G G VTP H+D N AQ
Sbjct: 179 WGQLTSNLLLIGMEGNVTPAHYDEQQNFFAQ 209
>sp|Q5ZMK5|JMJD6_CHICK Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6
OS=Gallus gallus GN=JMJD6 PE=2 SV=1
Length = 414
Score = 35.4 bits (80), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 74/187 (39%), Gaps = 22/187 (11%)
Query: 130 REANRLVSEEFNTA------KALQVLPNRSLSCKLVVKRS---ALSLEGFLSEYFLSGSP 180
REA R E + + P +CK V+R+ L++E F+ Y P
Sbjct: 10 REAKRSARPELKDSLDWTRHNYCETFPLSPAACKDNVERADALQLTVEEFVERYEKPYKP 69
Query: 181 VIITDCMAHWPARTNWNDLDYLKRVAGDRTVPVEVGKNYLCQDWKQELIPFSQFLERIQS 240
V++ + W A+ W L+ LKR R + G++ K ++ + +++E +
Sbjct: 70 VVLLNAQVGWSAQEKWT-LERLKRKY--RNQKFKCGEDNDGYSVKMKMKYYIEYMETTRD 126
Query: 241 NGSSASVPTYLAQHQLFDQINELRNDICIP-----DYCFVGGGELRSLNAWF--GPAGTV 293
+ + +H + +L D +P D G + R WF GP +
Sbjct: 127 DSPLYIFDSSYGEHP---KRRKLLEDYKVPKFFTDDLFQYAGEKRRPPYRWFVMGPPRSG 183
Query: 294 TPLHHDP 300
T +H DP
Sbjct: 184 TGIHIDP 190
>sp|P59723|HIF1N_DANRE Hypoxia-inducible factor 1-alpha inhibitor OS=Danio rerio GN=hif1an
PE=2 SV=2
Length = 344
Score = 35.0 bits (79), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 62/152 (40%), Gaps = 25/152 (16%)
Query: 179 SPVIITDCMAHWPARTNWNDLDYLKRVAGDRTVPVEVGKN--YLCQDWK-----QELIP- 230
PV++TD +PA W D+ YL+ G+ V + +N +L D K Q+ +P
Sbjct: 51 EPVVLTDTSLVYPA-LKW-DIPYLQENIGNGDFSVYIAENHKFLYYDEKKMVNFQDFVPK 108
Query: 231 -------FSQFLERIQSNGSSASVPTYLAQHQLFDQIN-ELRNDICIPDYCFVGG----- 277
FS+F++++ Q L D + ++ D ++ ++
Sbjct: 109 SRRIEMKFSEFVDKMHQTEEQGGKGRVYLQQTLNDTVGRKIVVDFLGFNWNWINKQQAKR 168
Query: 278 --GELRSLNAWFGPAGTVTPLHHDPHHNILAQ 307
G L S G G VTP H+D N AQ
Sbjct: 169 NWGPLTSNLLLIGMEGNVTPAHYDEQQNFFAQ 200
>sp|Q9ZMR9|Y162_HELPJ Probable transcriptional regulatory protein jhp_0149
OS=Helicobacter pylori (strain J99) GN=jhp_0149 PE=3
SV=1
Length = 240
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 12/104 (11%)
Query: 113 ETLSLKAREGENERFGEREANRLVSEEFNTAKALQVLPNRSLSCKLVVKRSALSLEGFLS 172
+ ++L A+EG +E + N + AKA Q +P ++ +KR++ S EG LS
Sbjct: 28 KAITLAAKEGGSEP----DTNAKLRTAILNAKA-QNMPKDNIDA--AIKRAS-SKEGNLS 79
Query: 173 EYFLSGSP----VIITDCMAHWPARTNWNDLDYLKRVAGDRTVP 212
E G +II +CM P RT N Y + G VP
Sbjct: 80 EITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVP 123
>sp|Q17YU3|Y344_HELAH Probable transcriptional regulatory protein Hac_0344
OS=Helicobacter acinonychis (strain Sheeba) GN=Hac_0344
PE=3 SV=1
Length = 240
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 12/104 (11%)
Query: 113 ETLSLKAREGENERFGEREANRLVSEEFNTAKALQVLPNRSLSCKLVVKRSALSLEGFLS 172
+ ++L A++G G+ + N + AKA Q +P ++ +KR++ S EG LS
Sbjct: 28 KAITLAAKDGG----GDPDTNAKLRTAILNAKA-QNMPKDNIDA--AIKRAS-SKEGNLS 79
Query: 173 EYFLSGSP----VIITDCMAHWPARTNWNDLDYLKRVAGDRTVP 212
E G +II +CM P RT N Y + G VP
Sbjct: 80 ETTYEGKANFGVLIIMECMTDNPTRTVANLKSYFNKTQGASIVP 123
>sp|B2URZ2|Y820_HELPS Probable transcriptional regulatory protein HPSH_00820
OS=Helicobacter pylori (strain Shi470) GN=HPSH_00820
PE=3 SV=1
Length = 240
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 47/104 (45%), Gaps = 12/104 (11%)
Query: 113 ETLSLKAREGENERFGEREANRLVSEEFNTAKALQVLPNRSLSCKLVVKRSALSLEGFLS 172
+ ++L A+EG E + N + AKA Q +P ++ +KR++ S EG LS
Sbjct: 28 KAITLAAKEGG----SEPDTNAKLRTAILNAKA-QNMPKDNIDA--AIKRAS-SKEGNLS 79
Query: 173 EYFLSGSP----VIITDCMAHWPARTNWNDLDYLKRVAGDRTVP 212
E G +II +CM P RT N Y + G VP
Sbjct: 80 EITYEGKANFGVLIIIECMTDNPTRTIANLKSYFNKTQGASIVP 123
>sp|Q8BFT6|JMJD4_MOUSE JmjC domain-containing protein 4 OS=Mus musculus GN=Jmjd4 PE=2 SV=1
Length = 427
Score = 33.9 bits (76), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 60/168 (35%), Gaps = 41/168 (24%)
Query: 163 SALSLEGFLSEYFLSGSPVIITDCMAH-WPARTNW------NDLDYLKRVAGDRTVPVEV 215
+A S F+ + L P + + W +R W D +YL++ GD VPV
Sbjct: 39 NAFSYADFVKGFLLPNLPCVFSSAFTEGWGSRRRWVTSEGKPDFEYLQQKYGDAVVPVAN 98
Query: 216 GKNYLCQDWKQELIPFSQFL----ERIQSNGSSASVPTYLAQHQLF-------------- 257
+E + F ++ + IQ + SS+ YL L
Sbjct: 99 CGVREYNSNPKEHMSFRDYISYWKDYIQGSYSSSRGCLYLKDWHLCRDSLVNDLEDIFTL 158
Query: 258 ------DQINELRNDICIPDYCFVGGGELRSLNAWFGPAGTVTPLHHD 299
D +NE + + + DY FV GP GT +P H D
Sbjct: 159 PVYFSSDWLNEFWDVLNVDDYRFVYA----------GPRGTWSPFHAD 196
>sp|Q32Q07|LRRN1_RAT Leucine-rich repeat neuronal protein 1 OS=Rattus norvegicus
GN=Lrrn1 PE=2 SV=1
Length = 716
Score = 33.5 bits (75), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 72/160 (45%), Gaps = 17/160 (10%)
Query: 79 YHYRNGEFKEALRVLDMGVLMGGPVLRKD---LDSAIETLSLKAREGENERFGEREANRL 135
+ + G+FK LR+ ++G+ G ++ D LD+ E L+A + R A
Sbjct: 276 HKIQEGDFKNMLRLKELGINNMGELVSVDRYALDNLPELTKLEATNNPKLSYIHRLA--- 332
Query: 136 VSEEFNTAKALQVLPNRSLSCKLVVKRSALSLEGFLSEYFLSGSPVIITDCMAHWPARTN 195
F + AL+ L + + V +++ SL L E + +P + DC+ HW +N
Sbjct: 333 ----FRSVPALESLMLNNNALNAVYQKTVESLPN-LREISIHSNP-LRCDCVIHW-INSN 385
Query: 196 WNDLDYLKRVAGDRTVPVEVG----KNYLCQDWKQELIPF 231
++ +++ ++ +P E K L QD ++ +P
Sbjct: 386 KTNIRFMEPLSMFCAMPPEYRGQQVKEVLIQDSSEQCLPM 425
>sp|Q61809|LRRN1_MOUSE Leucine-rich repeat neuronal protein 1 OS=Mus musculus GN=Lrrn1
PE=2 SV=1
Length = 716
Score = 33.5 bits (75), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 72/160 (45%), Gaps = 17/160 (10%)
Query: 79 YHYRNGEFKEALRVLDMGVLMGGPVLRKD---LDSAIETLSLKAREGENERFGEREANRL 135
+ + G+FK LR+ ++G+ G ++ D LD+ E L+A + R A
Sbjct: 276 HKIQEGDFKNMLRLKELGINNMGELVSVDRYALDNLPELTKLEATNNPKLSYIHRLA--- 332
Query: 136 VSEEFNTAKALQVLPNRSLSCKLVVKRSALSLEGFLSEYFLSGSPVIITDCMAHWPARTN 195
F + AL+ L + + V +++ SL L E + +P + DC+ HW +N
Sbjct: 333 ----FRSVPALESLMLNNNALNAVYQKTVESLPN-LREISIHSNP-LRCDCVIHW-INSN 385
Query: 196 WNDLDYLKRVAGDRTVPVEVG----KNYLCQDWKQELIPF 231
++ +++ ++ +P E K L QD ++ +P
Sbjct: 386 KTNIRFMEPLSMFCAMPPEYRGQQVKEVLIQDSSEQCLPM 425
>sp|Q1CUZ6|Y159_HELPH Probable transcriptional regulatory protein HPAG1_0159
OS=Helicobacter pylori (strain HPAG1) GN=HPAG1_0159 PE=3
SV=1
Length = 240
Score = 33.1 bits (74), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 8/74 (10%)
Query: 143 AKALQVLPNRSLSCKLVVKRSALSLEGFLSEYFLSGSP----VIITDCMAHWPARTNWND 198
AKA Q +P ++ +KR++ S EG LSE G +II +CM P RT N
Sbjct: 54 AKA-QNMPKDNIDA--AIKRAS-SKEGNLSEITYEGKANFGVLIIMECMTDNPTRTIANL 109
Query: 199 LDYLKRVAGDRTVP 212
Y + G VP
Sbjct: 110 KSYFNKTQGASIVP 123
>sp|Q6UXK5|LRRN1_HUMAN Leucine-rich repeat neuronal protein 1 OS=Homo sapiens GN=LRRN1
PE=1 SV=1
Length = 716
Score = 33.1 bits (74), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 72/160 (45%), Gaps = 17/160 (10%)
Query: 79 YHYRNGEFKEALRVLDMGVLMGGPVLRKD---LDSAIETLSLKAREGENERFGEREANRL 135
+ + G+FK LR+ ++G+ G ++ D LD+ E L+A + R A
Sbjct: 276 HKIQEGDFKNMLRLKELGINNMGELVSVDRYALDNLPELTKLEATNNPKLSYIHRLA--- 332
Query: 136 VSEEFNTAKALQVLPNRSLSCKLVVKRSALSLEGFLSEYFLSGSPVIITDCMAHWPARTN 195
F + AL+ L + + + +++ SL L E + +P + DC+ HW +N
Sbjct: 333 ----FRSVPALESLMLNNNALNAIYQKTVESLPN-LREISIHSNP-LRCDCVIHW-INSN 385
Query: 196 WNDLDYLKRVAGDRTVPVEVG----KNYLCQDWKQELIPF 231
++ +++ ++ +P E K L QD ++ +P
Sbjct: 386 KTNIRFMEPLSMFCAMPPEYKGHQVKEVLIQDSSEQCLPM 425
>sp|O24970|Y162_HELPY Probable transcriptional regulatory protein HP_0162 OS=Helicobacter
pylori (strain ATCC 700392 / 26695) GN=HP_0162 PE=1 SV=1
Length = 240
Score = 33.1 bits (74), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 8/74 (10%)
Query: 143 AKALQVLPNRSLSCKLVVKRSALSLEGFLSEYFLSGSP----VIITDCMAHWPARTNWND 198
AKA Q +P ++ +KR++ S EG LSE G +II +CM P RT N
Sbjct: 54 AKA-QNMPKDNIDA--AIKRAS-SKEGNLSEITYEGKANFGVLIIMECMTDNPTRTIANL 109
Query: 199 LDYLKRVAGDRTVP 212
Y + G VP
Sbjct: 110 KSYFNKTQGASIVP 123
>sp|B5Z9T6|Y148_HELPG Probable transcriptional regulatory protein HPG27_148
OS=Helicobacter pylori (strain G27) GN=HPG27_148 PE=3
SV=1
Length = 240
Score = 33.1 bits (74), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 8/74 (10%)
Query: 143 AKALQVLPNRSLSCKLVVKRSALSLEGFLSEYFLSGSP----VIITDCMAHWPARTNWND 198
AKA Q +P ++ +KR++ S EG LSE G +II +CM P RT N
Sbjct: 54 AKA-QNMPKDNIDA--AIKRAS-SKEGNLSEITYEGKANFGVLIIMECMTDNPTRTIANL 109
Query: 199 LDYLKRVAGDRTVP 212
Y + G VP
Sbjct: 110 KSYFNKTQGASIVP 123
>sp|B6JPQ9|Y160_HELP2 Probable transcriptional regulatory protein HPP12_0160
OS=Helicobacter pylori (strain P12) GN=HPP12_0160 PE=3
SV=1
Length = 240
Score = 33.1 bits (74), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 8/74 (10%)
Query: 143 AKALQVLPNRSLSCKLVVKRSALSLEGFLSEYFLSGSP----VIITDCMAHWPARTNWND 198
AKA Q +P ++ +KR++ S EG LSE G +II +CM P RT N
Sbjct: 54 AKA-QNMPKDNIDA--AIKRAS-SKEGNLSEITYEGKANFGVLIIMECMTDNPTRTIANL 109
Query: 199 LDYLKRVAGDRTVP 212
Y + G VP
Sbjct: 110 KSYFNKTQGASIVP 123
>sp|A0N0X6|LRRN1_BOVIN Leucine-rich repeat neuronal protein 1 OS=Bos taurus GN=LRRN1 PE=3
SV=1
Length = 716
Score = 33.1 bits (74), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 72/160 (45%), Gaps = 17/160 (10%)
Query: 79 YHYRNGEFKEALRVLDMGVLMGGPVLRKD---LDSAIETLSLKAREGENERFGEREANRL 135
+ + G+FK LR+ ++G+ G ++ D LD+ E L+A + R A
Sbjct: 276 HKIQEGDFKNMLRLKELGINNMGELVSVDRYALDNLPELTKLEATNNPKLSYIHRLA--- 332
Query: 136 VSEEFNTAKALQVLPNRSLSCKLVVKRSALSLEGFLSEYFLSGSPVIITDCMAHWPARTN 195
F + AL+ L + + V +++ SL L E + +P + DC+ HW +N
Sbjct: 333 ----FRSVPALESLMLNNNALNAVYQKTVESLPN-LREISIHSNP-LRCDCVIHW-INSN 385
Query: 196 WNDLDYLKRVAGDRTVPVEVG----KNYLCQDWKQELIPF 231
++ +++ ++ +P E K L QD ++ +P
Sbjct: 386 KTNIRFMEPLSMFCAMPPEYRGQQVKEVLIQDSSEQCLPM 425
>sp|Q54LV7|JMJCC_DICDI JmjC domain-containing protein C OS=Dictyostelium discoideum
GN=jcdC PE=4 SV=2
Length = 415
Score = 32.7 bits (73), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 250 YLAQHQLFDQINELRNDICIPDYCFVGGGELRSLNAWFGPAGTVTPLHHD 299
YLA + EL ND IP+ + + ++ N W G +TPLHHD
Sbjct: 142 YLASLPIQTYFKELINDFEIPE---IPKEQNKNGNLWIGFKDQITPLHHD 188
>sp|Q5R6G2|JMJD6_PONAB Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6
OS=Pongo abelii GN=JMJD6 PE=2 SV=1
Length = 403
Score = 32.7 bits (73), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 59/143 (41%), Gaps = 13/143 (9%)
Query: 165 LSLEGFLSEYFLSGSPVIITDCMAHWPARTNWNDLDYLKRVAGDRTVPVEVGKNYLCQDW 224
LS+E F+ Y PV++ + W A+ W L+ LKR R + G++
Sbjct: 54 LSVEEFVERYERPYKPVVLLNAQEGWSAQEKWT-LERLKRKY--RNQKFKCGEDNDGYSV 110
Query: 225 KQELIPFSQFLERIQSNGSSASVPTYLAQHQLFDQINELRNDICIP-----DYCFVGGGE 279
K ++ + +++E + + + +H + +L D +P D G +
Sbjct: 111 KMKMKYYIEYMESTRDDSPLYIFDSSYGEHP---KRRKLLEDYKVPKFFTDDLFQYAGEK 167
Query: 280 LRSLNAWF--GPAGTVTPLHHDP 300
R WF GP + T +H DP
Sbjct: 168 RRPPYRWFVMGPPRSGTGIHIDP 190
>sp|Q6NYC1|JMJD6_HUMAN Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6
OS=Homo sapiens GN=JMJD6 PE=1 SV=1
Length = 403
Score = 32.7 bits (73), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 59/143 (41%), Gaps = 13/143 (9%)
Query: 165 LSLEGFLSEYFLSGSPVIITDCMAHWPARTNWNDLDYLKRVAGDRTVPVEVGKNYLCQDW 224
LS+E F+ Y PV++ + W A+ W L+ LKR R + G++
Sbjct: 54 LSVEEFVERYERPYKPVVLLNAQEGWSAQEKWT-LERLKRKY--RNQKFKCGEDNDGYSV 110
Query: 225 KQELIPFSQFLERIQSNGSSASVPTYLAQHQLFDQINELRNDICIP-----DYCFVGGGE 279
K ++ + +++E + + + +H + +L D +P D G +
Sbjct: 111 KMKMKYYIEYMESTRDDSPLYIFDSSYGEHP---KRRKLLEDYKVPKFFTDDLFQYAGEK 167
Query: 280 LRSLNAWF--GPAGTVTPLHHDP 300
R WF GP + T +H DP
Sbjct: 168 RRPPYRWFVMGPPRSGTGIHIDP 190
>sp|Q58DS6|JMJD6_BOVIN Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6
OS=Bos taurus GN=JMJD6 PE=2 SV=1
Length = 403
Score = 32.7 bits (73), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 59/143 (41%), Gaps = 13/143 (9%)
Query: 165 LSLEGFLSEYFLSGSPVIITDCMAHWPARTNWNDLDYLKRVAGDRTVPVEVGKNYLCQDW 224
LS+E F+ Y PV++ + W A+ W L+ LKR R + G++
Sbjct: 54 LSVEEFVERYERPYKPVVLLNAQEGWSAQEKWT-LERLKRKY--RNQKFKCGEDNDGYSV 110
Query: 225 KQELIPFSQFLERIQSNGSSASVPTYLAQHQLFDQINELRNDICIP-----DYCFVGGGE 279
K ++ + +++E + + + +H + +L D +P D G +
Sbjct: 111 KMKMKYYIEYMESTRDDSPLYIFDSSYGEH---PKRRKLLEDYKVPKFFTDDLFQYAGEK 167
Query: 280 LRSLNAWF--GPAGTVTPLHHDP 300
R WF GP + T +H DP
Sbjct: 168 RRPPYRWFVMGPPRSGTGIHIDP 190
>sp|Q08BY5|JMJD4_DANRE JmjC domain-containing protein 4 OS=Danio rerio GN=jmjd4 PE=2 SV=1
Length = 422
Score = 32.3 bits (72), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 57/158 (36%), Gaps = 38/158 (24%)
Query: 170 FLSEYFLSGSPVIITDCMAH-WPARTNW------NDLDYLKRVAGDRTVPVEVGKNYLCQ 222
F Y + P + + W R W +L L + VPV
Sbjct: 41 FFKNYLIPNQPCMFSKKFTEEWNCRKKWVTAEGKPNLQRLLHEFDETPVPVANCSVKEYN 100
Query: 223 DWKQELIPFSQFL----ERIQSNGSSASVPTYLA---------QHQLF--------DQIN 261
++++PF +F+ E IQ+ SS YL +H ++ D +N
Sbjct: 101 ANPKQIMPFKEFIQYWRESIQNGHSSPKGCLYLKDWHMQRNFPEHNIYKTPIYFSSDWLN 160
Query: 262 ELRNDICIPDYCFVGGGELRSLNAWFGPAGTVTPLHHD 299
E + I + DY FV + GP G+ TP H D
Sbjct: 161 EYWDTIEVDDYRFV----------YMGPKGSWTPFHAD 188
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 121,902,590
Number of Sequences: 539616
Number of extensions: 5071472
Number of successful extensions: 12375
Number of sequences better than 100.0: 46
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 12313
Number of HSP's gapped (non-prelim): 50
length of query: 317
length of database: 191,569,459
effective HSP length: 117
effective length of query: 200
effective length of database: 128,434,387
effective search space: 25686877400
effective search space used: 25686877400
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)