BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021134
(317 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2A6P|A Chain A, Structure Solution To 2.2 Angstrom And Functional
Characterisation Of The Open Reading Frame Rv3214 From
Mycobacterium Tuberculosis
pdb|2A6P|B Chain B, Structure Solution To 2.2 Angstrom And Functional
Characterisation Of The Open Reading Frame Rv3214 From
Mycobacterium Tuberculosis
Length = 208
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 82/188 (43%), Gaps = 35/188 (18%)
Query: 76 IILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDD 135
++L+RHGE+ + + ++ LT+ G+ Q+E G+ + ++ ELDD
Sbjct: 13 LLLLRHGETAWS---TLGRHTGGTEVELTDTGRTQAELAGQLLGEL---------ELDDP 60
Query: 136 WQVYFYVSPYTRTLQTLQFLGRAFERSRIAGMTKEPRLREQDFGNFQDRERMRVEKAVRL 195
SP RTL T + G + + G+ L E D+G+++ ++ ++
Sbjct: 61 ---IVICSPRRRTLDTAKLAG--LTVNEVTGL-----LAEWDYGSYEGLTTPQIRES-EP 109
Query: 196 LYGRFFYRFPNGESAADVYDRITGFRETLRADIDHGRFQPPGHRSQNMNIVIVSHGLTLR 255
+ + + P GES A V DR + ++H + +++ VSHG R
Sbjct: 110 DWLVWTHGCPAGESVAQVNDRAD---SAVALALEH---------MSSRDVLFVSHGHFSR 157
Query: 256 VFLMRWYK 263
+ RW +
Sbjct: 158 AVITRWVQ 165
>pdb|3LG2|A Chain A, A Ykr043c FRUCTOSE-1,6-Bisphosphate Product Complex
Following Ligand Soaking
pdb|3LG2|B Chain B, A Ykr043c FRUCTOSE-1,6-Bisphosphate Product Complex
Following Ligand Soaking
pdb|3LG2|C Chain C, A Ykr043c FRUCTOSE-1,6-Bisphosphate Product Complex
Following Ligand Soaking
pdb|3LG2|D Chain D, A Ykr043c FRUCTOSE-1,6-Bisphosphate Product Complex
Following Ligand Soaking
Length = 292
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 92/202 (45%), Gaps = 26/202 (12%)
Query: 77 ILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDDW 136
I+VRHG++E + YT + D + LT G+ Q G + + + L+ D
Sbjct: 30 IIVRHGQTEWS-KSGQYTGLTD--LPLTPYGEGQXLRTGESVFR-------NNQFLNPDN 79
Query: 137 QVYFYVSPYTRTLQTLQFLGRAF---ERSRIAGMTKEPRLREQDFGNFQ---DRERMRVE 190
Y + SP R QT+ + + +R++I + + LRE ++G+++ RE + +
Sbjct: 80 ITYIFTSPRLRARQTVDLVLKPLSDEQRAKIRVVVDD-DLREWEYGDYEGXLTREIIELR 138
Query: 191 KAVRLLYGRFFYRF----PNGESAADVYDRITGFRETLRADIDHGRFQPPGHRSQNMNIV 246
K+ L R + + NGE+ + R++ R R H + Q G S +I
Sbjct: 139 KSRGLDKERPWNIWRDGCENGETTQQIGLRLS--RAIARIQNLHRKHQSEGRAS---DIX 193
Query: 247 IVSHGLTLRVFLMRWYKWTVEQ 268
+ +HG LR F W+ V++
Sbjct: 194 VFAHGHALRYFAAIWFGLGVQK 215
>pdb|3F3K|A Chain A, The Structure Of Uncharacterized Protein Ykr043c From
Saccharomyces Cerevisiae.
pdb|3F3K|B Chain B, The Structure Of Uncharacterized Protein Ykr043c From
Saccharomyces Cerevisiae
Length = 265
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 92/202 (45%), Gaps = 26/202 (12%)
Query: 77 ILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDDW 136
I+VRHG++E + YT + D + LT G+ Q G + + + L+ D
Sbjct: 9 IIVRHGQTEWS-KSGQYTGLTD--LPLTPYGEGQXLRTGESVFR-------NNQFLNPDN 58
Query: 137 QVYFYVSPYTRTLQTLQFLGRAF---ERSRIAGMTKEPRLREQDFGNFQ---DRERMRVE 190
Y + SP R QT+ + + +R++I + + LRE ++G+++ RE + +
Sbjct: 59 ITYIFTSPRLRARQTVDLVLKPLSDEQRAKIRVVVDD-DLREWEYGDYEGXLTREIIELR 117
Query: 191 KAVRLLYGRFFYRF----PNGESAADVYDRITGFRETLRADIDHGRFQPPGHRSQNMNIV 246
K+ L R + + NGE+ + R++ R R H + Q G S +I
Sbjct: 118 KSRGLDKERPWNIWRDGCENGETTQQIGLRLS--RAIARIQNLHRKHQSEGRAS---DIX 172
Query: 247 IVSHGLTLRVFLMRWYKWTVEQ 268
+ +HG LR F W+ V++
Sbjct: 173 VFAHGHALRYFAAIWFGLGVQK 194
>pdb|1FZT|A Chain A, Solution Structure And Dynamics Of An Open B-Sheet,
Glycolytic Enzyme-Monomeric 23.7 Kda Phosphoglycerate
Mutase From Schizosaccharomyces Pombe
Length = 211
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 81/190 (42%), Gaps = 33/190 (17%)
Query: 76 IILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDD 135
++L RHGESE N + +T DP AL+E G +++ G R++ G + D
Sbjct: 10 LVLTRHGESEWN-KLNLFTGWKDP--ALSETGIKEAKLGGERLKSR-------GYKFD-- 57
Query: 136 WQVYFYVSPYTRTLQTLQFLGRAFERSRIAGMTKEPRLREQDFGNFQ-----DRERMRVE 190
+ S R +T Q + + + E +L E+ +G+ Q D +
Sbjct: 58 ---IAFTSALQRAQKTCQIILEEVGEPNLETIKSE-KLNERYYGDLQGLNKDDARKKWGA 113
Query: 191 KAVRLLYGRFFYRFPNGESAADVYDRITG-FRETLRADIDHGRFQPPGHRSQNMNIVIVS 249
+ V++ + PNGES D +R+ ++ T+ I G ++I +
Sbjct: 114 EQVQIWRRSYDIAPPNGESLKDTAERVLPYYKSTIVPHILKGE-----------KVLIAA 162
Query: 250 HGLTLRVFLM 259
HG +LR +M
Sbjct: 163 HGNSLRALIM 172
>pdb|1EBB|A Chain A, Bacillus Stearothermophilus Yhfr
Length = 202
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 79/188 (42%), Gaps = 38/188 (20%)
Query: 76 IILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDD 135
+ L RHGE++ NV+ P LTEKG+ + G+R+ + EL
Sbjct: 4 LYLTRHGETKWNVERRMQGWQDSP---LTEKGRQDAMRLGKRL---------EAVEL--- 48
Query: 136 WQVYFYVSPYTRTLQTLQFLGRAFERSRIAGMTKEPRLREQDFGNFQDRERMRVEKAVRL 195
Y S R L+T + + R+ + ++ RLRE G+++ + + + +
Sbjct: 49 --AAIYTSTSGRALETAEIV----RGGRLIPIYQDERLREIHLGDWEGKTHDEIRQMDPI 102
Query: 196 LYGRFF-----YRFPNGESAADVYDRITGFRETLRADIDHGRFQPPGHRSQNMNIVIVSH 250
+ F+ Y GE DV R E +++ +D R + ++IV+H
Sbjct: 103 AFDHFWQAPHLYAPQRGERFCDVQQRAL---EAVQSIVD---------RHEGETVLIVTH 150
Query: 251 GLTLRVFL 258
G+ L+ +
Sbjct: 151 GVVLKTLM 158
>pdb|1H2E|A Chain A, Bacillus Stearothermophilus Phoe (Previously Known As
Yhfr) In Complex With Phosphate
pdb|1H2F|A Chain A, Bacillus Stearothermophilus Phoe (Previously Known As
Yhfr) In Complex With Trivanadate
Length = 207
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 79/188 (42%), Gaps = 38/188 (20%)
Query: 76 IILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDD 135
+ L RHGE++ NV+ P LTEKG+ + G+R+ + EL
Sbjct: 4 LYLTRHGETKWNVERRMQGWQDSP---LTEKGRQDAMRLGKRL---------EAVEL--- 48
Query: 136 WQVYFYVSPYTRTLQTLQFLGRAFERSRIAGMTKEPRLREQDFGNFQDRERMRVEKAVRL 195
Y S R L+T + + R+ + ++ RLRE G+++ + + + +
Sbjct: 49 --AAIYTSTSGRALETAEIV----RGGRLIPIYQDERLREIHLGDWEGKTHDEIRQMDPI 102
Query: 196 LYGRFF-----YRFPNGESAADVYDRITGFRETLRADIDHGRFQPPGHRSQNMNIVIVSH 250
+ F+ Y GE DV R E +++ +D R + ++IV+H
Sbjct: 103 AFDHFWQAPHLYAPQRGERFCDVQQRAL---EAVQSIVD---------RHEGETVLIVTH 150
Query: 251 GLTLRVFL 258
G+ L+ +
Sbjct: 151 GVVLKTLM 158
>pdb|3LL4|A Chain A, Structure Of The H13a Mutant Of Ykr043c In Complex With
Fructose-1,6- Bisphosphate
pdb|3LL4|B Chain B, Structure Of The H13a Mutant Of Ykr043c In Complex With
Fructose-1,6- Bisphosphate
Length = 292
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 92/202 (45%), Gaps = 26/202 (12%)
Query: 77 ILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDDW 136
I+VR G++E + YT + D + LT G+ Q G + + + L+ D
Sbjct: 30 IIVRAGQTEWS-KSGQYTGLTD--LPLTPYGEGQMLRTGESVFR-------NNQFLNPDN 79
Query: 137 QVYFYVSPYTRTLQTLQFLGRAF---ERSRIAGMTKEPRLREQDFGNFQ---DRERMRVE 190
Y + SP R QT+ + + +R++I + + LRE ++G+++ RE + +
Sbjct: 80 ITYIFTSPRLRARQTVDLVLKPLSDEQRAKIRVVVDD-DLREWEYGDYEGMLTREIIELR 138
Query: 191 KAVRLLYGRFFYRF----PNGESAADVYDRITGFRETLRADIDHGRFQPPGHRSQNMNIV 246
K+ L R + + NGE+ + R++ R R H + Q G S +I+
Sbjct: 139 KSRGLDKERPWNIWRDGCENGETTQQIGLRLS--RAIARIQNLHRKHQSEGRAS---DIM 193
Query: 247 IVSHGLTLRVFLMRWYKWTVEQ 268
+ +HG LR F W+ V++
Sbjct: 194 VFAHGHALRYFAAIWFGLGVQK 215
>pdb|3OI7|A Chain A, Structure Of The Structure Of The H13a Mutant Of Ykr043c
In Complex With Sedoheptulose-1,7-Bisphosphate
pdb|3OI7|B Chain B, Structure Of The Structure Of The H13a Mutant Of Ykr043c
In Complex With Sedoheptulose-1,7-Bisphosphate
pdb|3OI7|C Chain C, Structure Of The Structure Of The H13a Mutant Of Ykr043c
In Complex With Sedoheptulose-1,7-Bisphosphate
pdb|3OI7|D Chain D, Structure Of The Structure Of The H13a Mutant Of Ykr043c
In Complex With Sedoheptulose-1,7-Bisphosphate
Length = 292
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 91/202 (45%), Gaps = 26/202 (12%)
Query: 77 ILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDDW 136
I+VR G++E + YT + D + LT G+ Q G + + + L+ D
Sbjct: 30 IIVRAGQTEWS-KSGQYTGLTD--LPLTPYGEGQXLRTGESVFR-------NNQFLNPDN 79
Query: 137 QVYFYVSPYTRTLQTLQFLGRAF---ERSRIAGMTKEPRLREQDFGNFQ---DRERMRVE 190
Y + SP R QT+ + + +R++I + + LRE ++G+++ RE + +
Sbjct: 80 ITYIFTSPRLRARQTVDLVLKPLSDEQRAKIRVVVDD-DLREWEYGDYEGXLTREIIELR 138
Query: 191 KAVRLLYGRFFYRF----PNGESAADVYDRITGFRETLRADIDHGRFQPPGHRSQNMNIV 246
K+ L R + + NGE+ + R++ R R H + Q G S +I
Sbjct: 139 KSRGLDKERPWNIWRDGCENGETTQQIGLRLS--RAIARIQNLHRKHQSEGRAS---DIX 193
Query: 247 IVSHGLTLRVFLMRWYKWTVEQ 268
+ +HG LR F W+ V++
Sbjct: 194 VFAHGHALRYFAAIWFGLGVQK 215
>pdb|3BIF|A Chain A, 6-Phosphofructo-2-KinaseFRUCTOSE-2,6-Bisphosphatase Empty
6-Pf-2k Active Site
Length = 468
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 88/217 (40%), Gaps = 39/217 (17%)
Query: 76 IILVRHGESEGNVDESAYTRVA-DPKIALTEKGKAQSEECGRRIRQMI-EQNDGDGAELD 133
I L RHGESE N+ R+ DP L+ +G+ E + + Q I +QN D
Sbjct: 251 IYLCRHGESELNLK----GRIGGDP--GLSPRGR----EFSKHLAQFISDQNIKD----- 295
Query: 134 DDWQVYFYVSPYTRTLQTLQFLGRAFERSRIAGMTKEPRLREQDFGNFQDRERMRVEKAV 193
+ + S RT+QT + L +E+ ++ E + QD + E A+
Sbjct: 296 ----LKVFTSQMKRTIQTAEALSVPYEQFKVLNEIDAGVCEEMTYEEIQDHYPL--EFAL 349
Query: 194 RLLYGRFFYRFPNGESAADVYDRITGFRETLRADIDHGRFQPPGHRSQNMNIVIVSHGLT 253
R ++ YR+P GES D+ R+ E + +++ + N++++ H
Sbjct: 350 RD-QDKYRYRYPKGESYEDLVQRL----EPVIMELE-----------RQENVLVICHQAV 393
Query: 254 LRVFLMRWYKWTVEQFEXXXXXXXXXIIVMEKGYGGR 290
+R L + E+ + + YG +
Sbjct: 394 MRCLLAYFLDKAAEELPYLKCPLHTVLKLTPVAYGCK 430
>pdb|1BIF|A Chain A, 6-Phosphofructo-2-KinaseFRUCTOSE-2,6-Bisphosphatase
Bifunctional Enzyme Complexed With Atp-G-S And Phosphate
Length = 469
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 88/217 (40%), Gaps = 39/217 (17%)
Query: 76 IILVRHGESEGNVDESAYTRVA-DPKIALTEKGKAQSEECGRRIRQMI-EQNDGDGAELD 133
I L RHGESE N+ R+ DP L+ +G+ E + + Q I +QN D
Sbjct: 252 IYLCRHGESELNLK----GRIGGDP--GLSPRGR----EFSKHLAQFISDQNIKD----- 296
Query: 134 DDWQVYFYVSPYTRTLQTLQFLGRAFERSRIAGMTKEPRLREQDFGNFQDRERMRVEKAV 193
+ + S RT+QT + L +E+ ++ E + QD + E A+
Sbjct: 297 ----LKVFTSQMKRTIQTAEALSVPYEQFKVLNEIDAGVCEEMTYEEIQDHYPL--EFAL 350
Query: 194 RLLYGRFFYRFPNGESAADVYDRITGFRETLRADIDHGRFQPPGHRSQNMNIVIVSHGLT 253
R ++ YR+P GES D+ R+ E + +++ + N++++ H
Sbjct: 351 RD-QDKYRYRYPKGESYEDLVQRL----EPVIMELE-----------RQENVLVICHQAV 394
Query: 254 LRVFLMRWYKWTVEQFEXXXXXXXXXIIVMEKGYGGR 290
+R L + E+ + + YG +
Sbjct: 395 MRCLLAYFLDKAAEELPYLKCPLHTVLKLTPVAYGCK 431
>pdb|3HJG|A Chain A, Crystal Structure Of Putative Alpha-Ribazole-5'-Phosphate
Phosphatase Cobc From Vibrio Parahaemolyticus
pdb|3HJG|B Chain B, Crystal Structure Of Putative Alpha-Ribazole-5'-Phosphate
Phosphatase Cobc From Vibrio Parahaemolyticus
Length = 213
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 47/120 (39%), Gaps = 21/120 (17%)
Query: 143 SPYTRTLQTLQFLGRAFERSRIAGMTKEPRLREQDFGNFQ----DRERMRVEKAVRLLYG 198
SP +R Q L ++ MT E L+E DFG+F D +K
Sbjct: 55 SPLSRCHDLAQILAE----QQLLPMTTEDDLQEMDFGDFDGMPFDLLTEHWKKLDAFWQS 110
Query: 199 RFFYRFPNGESAADVYDRITGFRETLRADIDHGRFQPPGHRSQNMNIVIVSHGLTLRVFL 258
+ PN ES + R++ + DI N N++IV+HG +R+ L
Sbjct: 111 PAHHSLPNAESLSTFSQRVSRAWSQIINDI-------------NDNLLIVTHGGVIRIIL 157
>pdb|4EMB|A Chain A, Crystal Structure Of A Phosphoglycerate Mutase Gpma From
Borrelia Burgdorferi B31
pdb|4EMB|B Chain B, Crystal Structure Of A Phosphoglycerate Mutase Gpma From
Borrelia Burgdorferi B31
pdb|4EMB|C Chain C, Crystal Structure Of A Phosphoglycerate Mutase Gpma From
Borrelia Burgdorferi B31
pdb|4EMB|D Chain D, Crystal Structure Of A Phosphoglycerate Mutase Gpma From
Borrelia Burgdorferi B31
Length = 274
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 16/107 (14%)
Query: 76 IILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDD 135
++LVRHGESE N E+ +T D + L++KG ++ E G ++Q +G D
Sbjct: 30 LVLVRHGESEWN-KENLFTGWTD--VKLSDKGIDEAVEAGLLLKQ-------EGYSFD-- 77
Query: 136 WQVYFYVSPYTRTLQTLQFLGRAFERSRIAGMTKEPRLREQDFGNFQ 182
+ S +R TL + R +S I+ + K RL E+ +G Q
Sbjct: 78 ---IAFSSLLSRANDTLNIILRELGQSYIS-VKKTWRLNERHYGALQ 120
>pdb|3E9C|A Chain A, Structure Of A Tryptic Core Fragment Of Tigar From Danio
Rerio
pdb|3E9C|B Chain B, Structure Of A Tryptic Core Fragment Of Tigar From Danio
Rerio
pdb|3E9D|A Chain A, Structure Of Full-Length Tigar From Danio Rerio
pdb|3E9D|B Chain B, Structure Of Full-Length Tigar From Danio Rerio
Length = 265
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 83/201 (41%), Gaps = 37/201 (18%)
Query: 76 IILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDD 135
+ +VRHGE++ N D+ + D L++ G Q+ GR ++ + N
Sbjct: 6 LTIVRHGETQYNRDKLLQGQGID--TPLSDTGHQQAAAAGRYLKDLHFTN---------- 53
Query: 136 WQVYFYVSPYTRTLQTLQFLGRAFERSRIAGMTKEPRLREQDFGNFQDRERMRVEKAVRL 195
+VS R +QT + + S M +P LRE+ FG + R + ++
Sbjct: 54 ----VFVSNLQRAIQTAEIILGNNLHSSATEMILDPLLRERGFGVAEGRPKEHLKNMAN- 108
Query: 196 LYGRFF--YRFPNGESAADVYDRITGFRETL--RADIDHGRF---------QP------- 235
G+ Y P GE+ V R F ++L R +HG QP
Sbjct: 109 AAGQSCRDYTPPGGETLEQVKTRFKMFLKSLFQRMFEEHGSALSSVPSEADQPVIAGLAD 168
Query: 236 PGHRSQNMNIVIVSHGLTLRV 256
G ++ ++ ++VSHG +R+
Sbjct: 169 DGAQNVPVHALMVSHGAFIRI 189
>pdb|1QHF|A Chain A, Yeast Phosphoglycerate Mutase-3pg Complex Structure To 1.7
A
pdb|1QHF|B Chain B, Yeast Phosphoglycerate Mutase-3pg Complex Structure To 1.7
A
Length = 240
Score = 34.7 bits (78), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 16/116 (13%)
Query: 76 IILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDD 135
++LVRHG+SE N +++ +T D + L+ KG+ ++ G +++ D
Sbjct: 3 LVLVRHGQSEWN-EKNLFTGWVD--VKLSAKGQQEAARAGELLKEKKVYPD--------- 50
Query: 136 WQVYFYVSPYTRTLQTLQFLGRAFERSRIAGMTKEPRLREQDFGNFQDRERMRVEK 191
Y S +R +QT +R I + + RL E+ +G+ Q +++ K
Sbjct: 51 ---VLYTSKLSRAIQTANIALEKADRLWIP-VNRSWRLNERHYGDLQGKDKAETLK 102
>pdb|4PGM|A Chain A, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|4PGM|B Chain B, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|4PGM|C Chain C, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|4PGM|D Chain D, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|1BQ3|D Chain D, Saccharomyces Cerevisiae Phosphoglycerate Mutase In
Complex With Inositol Hexakisphosphate
pdb|1BQ3|C Chain C, Saccharomyces Cerevisiae Phosphoglycerate Mutase In
Complex With Inositol Hexakisphosphate
pdb|1BQ3|A Chain A, Saccharomyces Cerevisiae Phosphoglycerate Mutase In
Complex With Inositol Hexakisphosphate
pdb|1BQ3|B Chain B, Saccharomyces Cerevisiae Phosphoglycerate Mutase In
Complex With Inositol Hexakisphosphate
pdb|1BQ4|D Chain D, Saccharomyces Cerevisiae Phosphoglycerate Mutase In
Complex With Benzene Hexacarboxylate
pdb|1BQ4|C Chain C, Saccharomyces Cerevisiae Phosphoglycerate Mutase In
Complex With Benzene Hexacarboxylate
pdb|1BQ4|A Chain A, Saccharomyces Cerevisiae Phosphoglycerate Mutase In
Complex With Benzene Hexacarboxylate
pdb|1BQ4|B Chain B, Saccharomyces Cerevisiae Phosphoglycerate Mutase In
Complex With Benzene Hexacarboxylate
pdb|5PGM|D Chain D, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|5PGM|C Chain C, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|5PGM|A Chain A, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|5PGM|B Chain B, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|5PGM|F Chain F, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|5PGM|G Chain G, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|5PGM|H Chain H, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|5PGM|E Chain E, Saccharomyces Cerevisiae Phosphoglycerate Mutase
Length = 246
Score = 34.7 bits (78), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 16/116 (13%)
Query: 76 IILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDD 135
++LVRHG+SE N +++ +T D + L+ KG+ ++ G +++ D
Sbjct: 3 LVLVRHGQSEWN-EKNLFTGWVD--VKLSAKGQQEAARAGELLKEKKVYPD--------- 50
Query: 136 WQVYFYVSPYTRTLQTLQFLGRAFERSRIAGMTKEPRLREQDFGNFQDRERMRVEK 191
Y S +R +QT +R I + + RL E+ +G+ Q +++ K
Sbjct: 51 ---VLYTSKLSRAIQTANIALEKADRLWIP-VNRSWRLNERHYGDLQGKDKAETLK 102
>pdb|3PGM|A Chain A, The Structure Of Yeast Phosphoglycerate Mutase At 0.28 Nm
Resolution
pdb|3PGM|B Chain B, The Structure Of Yeast Phosphoglycerate Mutase At 0.28 Nm
Resolution
Length = 244
Score = 34.7 bits (78), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 57/116 (49%), Gaps = 16/116 (13%)
Query: 76 IILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDD 135
++LVRHG+SE N +++ +T D + L+ KG+ ++ G +++ G +D
Sbjct: 3 LVLVRHGQSEWN-EKNLFTGWVD--VKLSAKGQQEAARAGELLKE-----KGVNVLVD-- 52
Query: 136 WQVYFYVSPYTRTLQTLQFLGRAFERSRIAGMTKEPRLREQDFGNFQDRERMRVEK 191
Y S +R +QT +R I + + RL E+ +G+ Q +++ + K
Sbjct: 53 -----YTSKLSRAIQTANIALEKADRLWIP-VNRSWRLNERHYGDLQGKDKAQTLK 102
>pdb|2BIF|A Chain A, 6-Phosphofructo-2-KinaseFRUCTOSE-2,6-Bisphosphatase H256a
Mutant With F6p In Phosphatase Active Site
pdb|2BIF|B Chain B, 6-Phosphofructo-2-KinaseFRUCTOSE-2,6-Bisphosphatase H256a
Mutant With F6p In Phosphatase Active Site
Length = 469
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 87/217 (40%), Gaps = 39/217 (17%)
Query: 76 IILVRHGESEGNVDESAYTRVA-DPKIALTEKGKAQSEECGRRIRQMI-EQNDGDGAELD 133
I L R GESE N+ R+ DP L+ +G+ E + + Q I +QN D
Sbjct: 252 IYLCRAGESELNLK----GRIGGDP--GLSPRGR----EFSKHLAQFISDQNIKD----- 296
Query: 134 DDWQVYFYVSPYTRTLQTLQFLGRAFERSRIAGMTKEPRLREQDFGNFQDRERMRVEKAV 193
+ + S RT+QT + L +E+ ++ E + QD + E A+
Sbjct: 297 ----LKVFTSQMKRTIQTAEALSVPYEQFKVLNEIDAGVCEEMTYEEIQDHYPL--EFAL 350
Query: 194 RLLYGRFFYRFPNGESAADVYDRITGFRETLRADIDHGRFQPPGHRSQNMNIVIVSHGLT 253
R ++ YR+P GES D+ R+ E + +++ + N++++ H
Sbjct: 351 RD-QDKYRYRYPKGESYEDLVQRL----EPVIMELE-----------RQENVLVICHQAV 394
Query: 254 LRVFLMRWYKWTVEQFEXXXXXXXXXIIVMEKGYGGR 290
+R L + E+ + + YG +
Sbjct: 395 MRCLLAYFLDKAAEELPYLKCPLHTVLKLTPVAYGCK 431
>pdb|1E59|A Chain A, E.Coli Cofactor-Dependent Phosphoglycerate Mutase
Complexed With Vanadate
Length = 249
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 55/107 (51%), Gaps = 16/107 (14%)
Query: 76 IILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDD 135
++LVRHGES+ N E+ +T D + L+EKG ++++ G+ +++ +G D
Sbjct: 5 LVLVRHGESQWN-KENRFTGWYD--VDLSEKGVSEAKAAGKLLKE-------EGYSFD-- 52
Query: 136 WQVYFYVSPYTRTLQTLQFLGRAFERSRIAGMTKEPRLREQDFGNFQ 182
+ Y S R + TL + +++ + + K +L E+ +G Q
Sbjct: 53 ---FAYTSVLKRAIHTLWNVLDELDQAWLP-VEKSWKLNERHYGALQ 95
>pdb|2AXN|A Chain A, Crystal Structure Of The Human Inducible Form 6-
Phosphofructo-2-KinaseFRUCTOSE-2,6-Bisphosphatase
pdb|2DWO|A Chain A, Pfkfb3 In Complex With Adp And Pep
pdb|2DWP|A Chain A, A Pseudo Substrate Complex Of 6-Phosphofructo-2-Kinase Of
Pfkfb
pdb|2I1V|B Chain B, Crystal Structure Of Pfkfb3 In Complex With Adp And
Fructose-2,6-Bisphosphate
pdb|3QPU|A Chain A, Pfkfb3 In Complex With Ppi
pdb|3QPV|A Chain A, Pfkfb3 Trapped In A Phospho-Enzyme Intermediate State
pdb|3QPW|A Chain A, Pfkfb3 In Complex With Aluminum Tetrafluoride
Length = 520
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 87/221 (39%), Gaps = 47/221 (21%)
Query: 76 IILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDD 135
I L RHGE+E N+ R+ L+ +GK + + + EQN D
Sbjct: 249 IYLCRHGENEHNLQ----GRIGGDS-GLSSRGKKFASALSKFVE---EQNLKD------- 293
Query: 136 WQVYFYVSPYTRTLQTLQFLGRAFERSRIAGMTKEPRLREQDFGNFQD------RERMRV 189
+ + S T+QT + L +E+ + L E D G ++ R+
Sbjct: 294 --LRVWTSQLKSTIQTAEALRLPYEQWKA--------LNEIDAGVCEELTYEEIRDTYPE 343
Query: 190 EKAVRLLYGRFFYRFPNGESAADVYDRITGFRETLRADIDHGRFQPPGHRSQNMNIVIVS 249
E A+R +++YR+P GES D+ R+ E + +++ + N++++
Sbjct: 344 EYALRE-QDKYYYRYPTGESYQDLVQRL----EPVIMELE-----------RQENVLVIC 387
Query: 250 HGLTLRVFLMRWYKWTVEQFEXXXXXXXXXIIVMEKGYGGR 290
H LR L + + E+ + + YG R
Sbjct: 388 HQAVLRCLLAYFLDKSAEEMPYLKCPLHTVLKLTPVAYGCR 428
>pdb|3E9E|A Chain A, Structure Of Full-Length H11a Mutant Form Of Tigar From
Danio Rerio
pdb|3E9E|B Chain B, Structure Of Full-Length H11a Mutant Form Of Tigar From
Danio Rerio
Length = 265
Score = 32.0 bits (71), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 82/201 (40%), Gaps = 37/201 (18%)
Query: 76 IILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDD 135
+ +VR GE++ N D+ + D L++ G Q+ GR ++ + N
Sbjct: 6 LTIVRAGETQYNRDKLLQGQGID--TPLSDTGHQQAAAAGRYLKDLHFTN---------- 53
Query: 136 WQVYFYVSPYTRTLQTLQFLGRAFERSRIAGMTKEPRLREQDFGNFQDRERMRVEKAVRL 195
+VS R +QT + + S M +P LRE+ FG + R + ++
Sbjct: 54 ----VFVSNLQRAIQTAEIILGNNLHSSATEMILDPLLRERGFGVAEGRPKEHLKNMAN- 108
Query: 196 LYGRFF--YRFPNGESAADVYDRITGFRETL--RADIDHGRF---------QP------- 235
G+ Y P GE+ V R F ++L R +HG QP
Sbjct: 109 AAGQSCRDYTPPGGETLEQVKTRFKMFLKSLFQRMFEEHGSALSSVPSEADQPVIAGLAD 168
Query: 236 PGHRSQNMNIVIVSHGLTLRV 256
G ++ ++ ++VSHG +R+
Sbjct: 169 DGAQNVPVHALMVSHGAFIRI 189
>pdb|1C7Z|A Chain A, Regulatory Complex Of Fructose-2,6-Bisphosphatase
pdb|1C7Z|B Chain B, Regulatory Complex Of Fructose-2,6-Bisphosphatase
pdb|1C80|A Chain A, Regulatory Complex Of Fructose-2,6-Bisphosphatase
pdb|1C80|B Chain B, Regulatory Complex Of Fructose-2,6-Bisphosphatase
pdb|1C81|A Chain A, Michaelis Complex Of Fructose-2,6-Bisphosphatase
Length = 191
Score = 31.2 bits (69), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 80/215 (37%), Gaps = 35/215 (16%)
Query: 76 IILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDD 135
I L RHGESE N+ R+ L+ +GK + IR G
Sbjct: 4 IYLCRHGESELNLR----GRIGGDS-GLSARGKQYAYALANFIR-------SQGISSLKV 51
Query: 136 WQVYFYVSPYTRTLQTLQFLGRAFERSRIAGMTKEPRLREQDFGNFQDRERMRVEKAVRL 195
W S RT+QT + LG +E+ + E + Q E E A+R
Sbjct: 52 W-----TSHMKRTIQTAEALGVPYEQWKALNEIDAGVCEEMTYEEIQ--EHYPEEFALRD 104
Query: 196 LYGRFFYRFPNGESAADVYDRITGFRETLRADIDHGRFQPPGHRSQNMNIVIVSHGLTLR 255
++ YR+P GES D+ R+ E + +++ + N++++ H +R
Sbjct: 105 -QDKYRYRYPKGESYEDLVQRL----EPVIMELE-----------RQENVLVICHQAVMR 148
Query: 256 VFLMRWYKWTVEQFEXXXXXXXXXIIVMEKGYGGR 290
L + + ++ + + YG R
Sbjct: 149 CLLAYFLDKSSDELPYLKCPLHTVLKLTPVAYGCR 183
>pdb|3D8H|A Chain A, Crystal Structure Of Phosphoglycerate Mutase From
Cryptosporidium Parvum, Cgd7_4270
pdb|3D8H|B Chain B, Crystal Structure Of Phosphoglycerate Mutase From
Cryptosporidium Parvum, Cgd7_4270
Length = 267
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 76 IILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQ 120
+ L+RHGESE N E+ +T D ++L+E+G +++ E GR + +
Sbjct: 23 LTLIRHGESEWN-KENRFTGWTD--VSLSEQGVSEAIEAGRMLLE 64
>pdb|1K6M|A Chain A, Crystal Structure Of Human Liver
6-Phosphofructo-2-KinaseFRUCTOSE-2, 6-Bisphosphatase
pdb|1K6M|B Chain B, Crystal Structure Of Human Liver
6-Phosphofructo-2-KinaseFRUCTOSE-2, 6-Bisphosphatase
Length = 432
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 83/215 (38%), Gaps = 35/215 (16%)
Query: 76 IILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDD 135
I L RHGESE N+ R+ L+ +GK + I Q+ G +
Sbjct: 215 IYLCRHGESELNIR----GRIGGDS-GLSVRGKQYAYALANFI-----QSQGISS----- 259
Query: 136 WQVYFYVSPYTRTLQTLQFLGRAFERSRIAGMTKEPRLREQDFGNFQDRERMRVEKAVRL 195
+ + S RT+QT + LG +E+ + E + Q E E A+R
Sbjct: 260 --LKVFTSRMKRTIQTAEALGVPYEQFKALNEIDAGVCEEMTYEEIQ--EHYPEEFALRD 315
Query: 196 LYGRFFYRFPNGESAADVYDRITGFRETLRADIDHGRFQPPGHRSQNMNIVIVSHGLTLR 255
++ YR+P GES D+ R+ E + +++ + N++++ H +R
Sbjct: 316 -QDKYRYRYPKGESYEDLVQRL----EPVIMELE-----------RQENVLVICHQAVMR 359
Query: 256 VFLMRWYKWTVEQFEXXXXXXXXXIIVMEKGYGGR 290
L + + E+ + + YG +
Sbjct: 360 CLLAYFLDKSSEELPYLKCPLHTVLKLTPVAYGCK 394
>pdb|1FBT|A Chain A, The Bisphosphatase Domain Of The Bifunctional Rat Liver 6-
Phosphofructo-2-KinaseFRUCTOSE-2,6-Bisphosphatase
pdb|1FBT|B Chain B, The Bisphosphatase Domain Of The Bifunctional Rat Liver 6-
Phosphofructo-2-KinaseFRUCTOSE-2,6-Bisphosphatase
Length = 190
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 75/215 (34%), Gaps = 35/215 (16%)
Query: 76 IILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDD 135
I L RHGESE N+ R+ L+ +GK + IR G
Sbjct: 3 IYLCRHGESELNLR----GRIGGDS-GLSARGKQYAYALANFIR-------SQGISSLKV 50
Query: 136 WQVYFYVSPYTRTLQTLQFLGRAFERSRIAGMTKEPRLREQDFGNFQDRERMRVEKAVRL 195
W S RT+QT + LG +E+ + E + Q E E A+R
Sbjct: 51 W-----TSHXKRTIQTAEALGVPYEQWKALNEIDAGVCEEXTYEEIQ--EHYPEEFALRD 103
Query: 196 LYGRFFYRFPNGESAADVYDRITGFRETLRADIDHGRFQPPGHRSQNMNIVIVSHGLTLR 255
++ YR+P GES D+ R+ L + N++++ H R
Sbjct: 104 -QDKYRYRYPKGESYEDLVQRLEPVIXEL---------------ERQENVLVICHQAVXR 147
Query: 256 VFLMRWYKWTVEQFEXXXXXXXXXIIVMEKGYGGR 290
L + + ++ + + YG R
Sbjct: 148 CLLAYFLDKSSDELPYLKCPLHTVLKLTPVAYGCR 182
>pdb|1XQ9|A Chain A, Structure Of Phosphoglycerate Mutase From Plasmodium
Falciparum At 2.6 Resolution
pdb|1XQ9|B Chain B, Structure Of Phosphoglycerate Mutase From Plasmodium
Falciparum At 2.6 Resolution
Length = 258
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Query: 76 IILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQ 120
++L+RHGES N E+ +T D + L+EKG+ ++ G+ +++
Sbjct: 14 LVLLRHGESTWN-KENKFTGWTD--VPLSEKGEEEAIAAGKYLKE 55
>pdb|1RII|A Chain A, Crystal Structure Of Phosphoglycerate Mutase From M.
Tuberculosis
pdb|1RII|B Chain B, Crystal Structure Of Phosphoglycerate Mutase From M.
Tuberculosis
pdb|1RII|C Chain C, Crystal Structure Of Phosphoglycerate Mutase From M.
Tuberculosis
pdb|1RII|D Chain D, Crystal Structure Of Phosphoglycerate Mutase From M.
Tuberculosis
Length = 265
Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 16/111 (14%)
Query: 76 IILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDD 135
++L+RHGES+ N + +T D + LT+KG+A++ G ++I ++D L D
Sbjct: 7 LVLLRHGESDWNA-LNLFTGWVD--VGLTDKGQAEAVRSG----ELIAEHD----LLPD- 54
Query: 136 WQVYFYVSPYTRTLQTLQFLGRAFERSRIAGMTKEPRLREQDFGNFQDRER 186
Y S R + T + +R I + + RL E+ +G Q ++
Sbjct: 55 ---VLYTSLLRRAITTAHLALDSADRLWIP-VRRSWRLNERHYGALQGLDK 101
>pdb|4EO9|A Chain A, Crystal Structure Of A Phosphoglycerate Mutase Gpm1 From
Mycobacterium Leprae
Length = 268
Score = 29.3 bits (64), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 76 IILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECG 115
+IL+RHGES+ N + +T D + LT+KG+A++ G
Sbjct: 30 LILLRHGESDWNA-RNLFTGWVD--VGLTDKGRAEAVRSG 66
>pdb|3KKK|A Chain A, Y92c Catalytic Residue Mutant Of Phosphoglycerate Mutase
From Plasmodium Falciparum
pdb|3KKK|B Chain B, Y92c Catalytic Residue Mutant Of Phosphoglycerate Mutase
From Plasmodium Falciparum
pdb|3KKK|C Chain C, Y92c Catalytic Residue Mutant Of Phosphoglycerate Mutase
From Plasmodium Falciparum
pdb|3KKK|D Chain D, Y92c Catalytic Residue Mutant Of Phosphoglycerate Mutase
From Plasmodium Falciparum
Length = 258
Score = 29.3 bits (64), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Query: 76 IILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQ 120
++L+RHGES N E+ +T D + L+EKG+ ++ G+ +++
Sbjct: 14 LVLLRHGESTWN-KENKFTGWTD--VPLSEKGEEEAIAAGKYLKE 55
>pdb|3T12|B Chain B, Mgla In Complex With Mglb In Transition State
pdb|3T12|C Chain C, Mgla In Complex With Mglb In Transition State
pdb|3T1Q|B Chain B, Mgla Bound To Gppnhp In Complex With Mglb
pdb|3T1Q|C Chain C, Mgla Bound To Gppnhp In Complex With Mglb
Length = 136
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 287 YGGRYSLLVHHTEEELREFGLTYEMLIDQE 316
YG Y+ V EE LRE G Y +LID++
Sbjct: 6 YGAPYAAAVEVLEETLRETGARYALLIDRK 35
>pdb|3EZN|A Chain A, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei 1710b
pdb|3EZN|B Chain B, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei 1710b
pdb|3FDZ|A Chain A, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei 1710b With Bound
2,3-Diphosphoglyceric Acid And 3- Phosphoglyceric Acid
pdb|3GP3|A Chain A, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei With 2-Phosphoserine
pdb|3GP3|B Chain B, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei With 2-Phosphoserine
pdb|3GP3|C Chain C, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei With 2-Phosphoserine
pdb|3GP3|D Chain D, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei With 2-Phosphoserine
pdb|3GP5|A Chain A, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei With 3-Phosphoglyceric Acid
And Vanadate
pdb|3GP5|B Chain B, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei With 3-Phosphoglyceric Acid
And Vanadate
pdb|3GW8|A Chain A, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei With Vanadate And Glycerol
pdb|3GW8|B Chain B, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei With Vanadate And Glycerol
Length = 257
Score = 28.9 bits (63), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Query: 76 IILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQ 120
++L+RHGES N E+ +T D + LTE+G ++ + G+ +++
Sbjct: 12 LVLIRHGESTWN-KENRFTGWVD--VDLTEQGNREARQAGQLLKE 53
>pdb|3LNT|A Chain A, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei 1710b With Bound Malonic Acid
pdb|3LNT|B Chain B, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei 1710b With Bound Malonic Acid
Length = 250
Score = 28.9 bits (63), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Query: 76 IILVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQ 120
++L+RHGES N E+ +T D + LTE+G ++ + G+ +++
Sbjct: 5 LVLIRHGESTWN-KENRFTGWVD--VDLTEQGNREARQAGQLLKE 46
>pdb|1TIP|A Chain A, The Bisphosphatase Domain Of The Bifunctional Rat Liver 6-
Phosphofructo-2-kinase/fructose-2,6-bisphosphatase
pdb|1TIP|B Chain B, The Bisphosphatase Domain Of The Bifunctional Rat Liver 6-
Phosphofructo-2-kinase/fructose-2,6-bisphosphatase
Length = 191
Score = 28.5 bits (62), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 50/118 (42%), Gaps = 18/118 (15%)
Query: 141 YVSPYTRTLQTLQFLGRAFERSRIAGMTKEPRLREQDFGNFQDRERMRVEKAVRLLYGRF 200
+ S RT+QT + LG +E+ + E + Q E E A+R ++
Sbjct: 52 WTSHMKRTIQTAEALGVPYEQWKALNEIDAGVCEEMTYEEIQ--EHYPEEFALRD-QDKY 108
Query: 201 FYRFPNGESAADVYDRITGFRETLRADIDHGRFQPPGHRSQNMNIVIVSHGLTLRVFL 258
YR+P GES D+ R+ E + +++ + N++++ H +R L
Sbjct: 109 RYRYPKGESYEDLVQRL----EPVIMELE-----------RQENVLVICHQAVMRCLL 151
>pdb|3F2I|A Chain A, Crystal Structure Of The Alr0221 Protein From Nostoc,
Northeast Structural Genomics Consortium Target Nsr422.
pdb|3F2I|B Chain B, Crystal Structure Of The Alr0221 Protein From Nostoc,
Northeast Structural Genomics Consortium Target Nsr422.
pdb|3F2I|C Chain C, Crystal Structure Of The Alr0221 Protein From Nostoc,
Northeast Structural Genomics Consortium Target Nsr422.
pdb|3F2I|D Chain D, Crystal Structure Of The Alr0221 Protein From Nostoc,
Northeast Structural Genomics Consortium Target Nsr422.
pdb|3F2I|E Chain E, Crystal Structure Of The Alr0221 Protein From Nostoc,
Northeast Structural Genomics Consortium Target Nsr422.
pdb|3F2I|F Chain F, Crystal Structure Of The Alr0221 Protein From Nostoc,
Northeast Structural Genomics Consortium Target Nsr422
Length = 172
Score = 28.1 bits (61), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 17/78 (21%)
Query: 78 LVRHGESEGNVDESAYTRVADPKIALTEKGKAQSEECGRRIRQMIEQNDGDGAELDDDWQ 137
L+RHG + E+ T + D + LT++GK ++E+ R+ ++ Q D
Sbjct: 5 LIRHG-----IAEAQKTGIKDEERELTQEGKQKTEKVAYRLVKLGRQFD----------- 48
Query: 138 VYFYVSPYTRTLQTLQFL 155
SP R QT + L
Sbjct: 49 -LIVTSPLIRARQTAEIL 65
>pdb|3T1R|A Chain A, Mglb With Tetrameric Arrangement
pdb|3T1R|B Chain B, Mglb With Tetrameric Arrangement
pdb|3T1R|C Chain C, Mglb With Tetrameric Arrangement
pdb|3T1R|D Chain D, Mglb With Tetrameric Arrangement
Length = 165
Score = 27.7 bits (60), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 17/30 (56%)
Query: 287 YGGRYSLLVHHTEEELREFGLTYEMLIDQE 316
YG Y V EE LRE G Y +LID++
Sbjct: 11 YGAPYERAVEVLEETLRETGARYALLIDRK 40
>pdb|3T1S|A Chain A, Mglb Homodimer
Length = 136
Score = 27.7 bits (60), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 17/30 (56%)
Query: 287 YGGRYSLLVHHTEEELREFGLTYEMLIDQE 316
YG Y V EE LRE G Y +LID++
Sbjct: 6 YGAPYERAVEVLEETLRETGARYALLIDRK 35
>pdb|1J3W|A Chain A, Structure Of Gliding Protein-mglb From Thermus
Thermophilus Hb8
pdb|1J3W|B Chain B, Structure Of Gliding Protein-mglb From Thermus
Thermophilus Hb8
pdb|1J3W|C Chain C, Structure Of Gliding Protein-mglb From Thermus
Thermophilus Hb8
pdb|1J3W|D Chain D, Structure Of Gliding Protein-mglb From Thermus
Thermophilus Hb8
Length = 163
Score = 27.7 bits (60), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 17/30 (56%)
Query: 287 YGGRYSLLVHHTEEELREFGLTYEMLIDQE 316
YG Y V EE LRE G Y +LID++
Sbjct: 9 YGAPYERAVEVLEETLRETGARYALLIDRK 38
>pdb|2H7Z|B Chain B, Crystal Structure Of Irditoxin
Length = 77
Score = 27.7 bits (60), Expect = 9.8, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Query: 26 KSNCYNAFKFKCC---HKTAETIHLHQGNGKVGFSEKG 60
+ C N FK C H+T T++ GNG++ ++ KG
Sbjct: 15 RETCSNCFKDNRCPPYHRTCYTLYRPDGNGEMKWAVKG 52
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.138 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,283,292
Number of Sequences: 62578
Number of extensions: 361350
Number of successful extensions: 611
Number of sequences better than 100.0: 39
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 596
Number of HSP's gapped (non-prelim): 40
length of query: 317
length of database: 14,973,337
effective HSP length: 99
effective length of query: 218
effective length of database: 8,778,115
effective search space: 1913629070
effective search space used: 1913629070
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)