Query 021144
Match_columns 317
No_of_seqs 168 out of 1109
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 13:22:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021144.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021144hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1lt8_A Betaine-homocysteine me 100.0 1.5E-62 5.1E-67 477.6 23.2 267 8-311 9-293 (406)
2 1q7z_A 5-methyltetrahydrofolat 100.0 1.2E-61 4E-66 490.0 27.6 263 9-315 4-269 (566)
3 3vnd_A TSA, tryptophan synthas 96.1 0.23 7.8E-06 45.1 16.0 89 174-273 116-211 (267)
4 3si9_A DHDPS, dihydrodipicolin 95.7 0.14 4.7E-06 47.6 13.1 104 161-278 40-158 (315)
5 3fkr_A L-2-keto-3-deoxyarabona 95.5 0.15 5.2E-06 47.1 12.5 104 161-277 26-146 (309)
6 3m5v_A DHDPS, dihydrodipicolin 95.4 0.25 8.5E-06 45.4 13.5 105 161-278 25-144 (301)
7 2vc6_A MOSA, dihydrodipicolina 95.4 0.15 5.2E-06 46.7 11.9 105 161-278 18-136 (292)
8 1xky_A Dihydrodipicolinate syn 95.3 0.2 6.7E-06 46.2 12.5 105 161-278 30-148 (301)
9 3nav_A Tryptophan synthase alp 95.3 0.65 2.2E-05 42.2 15.7 89 174-273 118-213 (271)
10 3cpr_A Dihydrodipicolinate syn 95.3 0.2 6.8E-06 46.2 12.3 105 161-278 34-152 (304)
11 2ojp_A DHDPS, dihydrodipicolin 95.2 0.23 7.7E-06 45.5 12.4 105 161-278 19-137 (292)
12 2ehh_A DHDPS, dihydrodipicolin 95.2 0.23 7.9E-06 45.5 12.4 105 161-278 18-136 (294)
13 2yxg_A DHDPS, dihydrodipicolin 95.0 0.22 7.7E-06 45.4 11.7 105 161-278 18-136 (289)
14 1o5k_A DHDPS, dihydrodipicolin 94.9 0.24 8.1E-06 45.7 11.7 105 161-278 30-148 (306)
15 2r8w_A AGR_C_1641P; APC7498, d 94.8 0.25 8.7E-06 46.1 11.7 105 161-278 52-170 (332)
16 3qfe_A Putative dihydrodipicol 94.7 0.72 2.5E-05 42.7 14.6 105 161-278 29-149 (318)
17 3tak_A DHDPS, dihydrodipicolin 94.7 0.33 1.1E-05 44.4 12.0 105 161-278 19-137 (291)
18 3flu_A DHDPS, dihydrodipicolin 94.6 0.43 1.5E-05 43.7 12.7 105 161-278 25-143 (297)
19 3l21_A DHDPS, dihydrodipicolin 94.6 0.31 1.1E-05 44.9 11.8 105 161-278 33-151 (304)
20 3na8_A Putative dihydrodipicol 94.6 0.35 1.2E-05 44.8 12.2 105 161-278 42-160 (315)
21 3qze_A DHDPS, dihydrodipicolin 94.6 0.36 1.2E-05 44.7 12.2 105 161-278 41-159 (314)
22 2rfg_A Dihydrodipicolinate syn 94.6 0.31 1.1E-05 44.7 11.7 105 161-278 18-136 (297)
23 3d0c_A Dihydrodipicolinate syn 94.5 0.4 1.4E-05 44.3 12.3 108 161-283 30-151 (314)
24 1f6k_A N-acetylneuraminate lya 94.5 0.3 1E-05 44.6 11.3 105 161-278 21-140 (293)
25 2v9d_A YAGE; dihydrodipicolini 94.5 0.29 1E-05 46.0 11.3 105 161-278 49-167 (343)
26 3e96_A Dihydrodipicolinate syn 94.4 0.31 1.1E-05 45.1 11.4 102 161-276 30-145 (316)
27 3s5o_A 4-hydroxy-2-oxoglutarat 94.4 0.33 1.1E-05 44.8 11.3 105 161-278 32-152 (307)
28 3dz1_A Dihydrodipicolinate syn 94.4 0.44 1.5E-05 44.0 12.2 105 161-278 26-144 (313)
29 2wkj_A N-acetylneuraminate lya 94.3 0.33 1.1E-05 44.7 11.2 105 161-278 29-148 (303)
30 3a5f_A Dihydrodipicolinate syn 94.3 0.31 1E-05 44.6 10.9 105 161-278 19-137 (291)
31 2nuw_A 2-keto-3-deoxygluconate 94.2 0.62 2.1E-05 42.5 12.7 103 161-278 17-133 (288)
32 3b4u_A Dihydrodipicolinate syn 94.2 0.51 1.8E-05 43.2 12.2 105 161-278 21-143 (294)
33 2r91_A 2-keto-3-deoxy-(6-phosp 94.2 0.68 2.3E-05 42.1 12.9 103 161-278 16-132 (286)
34 3daq_A DHDPS, dihydrodipicolin 94.1 0.44 1.5E-05 43.6 11.6 105 161-278 20-138 (292)
35 2qjg_A Putative aldolase MJ040 94.1 1.4 4.9E-05 39.2 14.8 95 173-274 104-208 (273)
36 3eb2_A Putative dihydrodipicol 93.9 0.62 2.1E-05 42.8 12.2 105 161-278 22-140 (300)
37 1w3i_A EDA, 2-keto-3-deoxy glu 93.8 0.91 3.1E-05 41.4 12.9 103 161-278 17-133 (293)
38 1lt8_A Betaine-homocysteine me 93.7 2.6 9E-05 40.4 16.5 156 54-266 134-317 (406)
39 1q7z_A 5-methyltetrahydrofolat 93.7 1.6 5.5E-05 43.7 15.5 158 54-266 121-290 (566)
40 3lye_A Oxaloacetate acetyl hyd 93.4 1 3.5E-05 41.7 12.6 84 171-266 181-268 (307)
41 2hmc_A AGR_L_411P, dihydrodipi 93.4 0.61 2.1E-05 43.8 11.2 102 161-277 44-160 (344)
42 3h5d_A DHDPS, dihydrodipicolin 92.8 0.79 2.7E-05 42.3 11.0 100 170-278 30-144 (311)
43 2cw6_A Hydroxymethylglutaryl-C 92.3 5.8 0.0002 36.0 16.2 132 63-239 88-224 (298)
44 1ydo_A HMG-COA lyase; TIM-barr 92.1 2.6 8.8E-05 38.7 13.5 132 63-239 89-225 (307)
45 2ftp_A Hydroxymethylglutaryl-C 92.0 2 6.9E-05 39.2 12.6 140 52-239 84-227 (302)
46 1z41_A YQJM, probable NADH-dep 91.8 3.5 0.00012 38.2 14.2 131 163-311 38-243 (338)
47 3noy_A 4-hydroxy-3-methylbut-2 91.4 1.7 5.7E-05 41.0 11.3 124 170-313 48-179 (366)
48 4dpp_A DHDPS 2, dihydrodipicol 90.9 2.1 7.1E-05 40.5 11.6 103 161-278 77-193 (360)
49 1f76_A Dihydroorotate dehydrog 90.8 2 6.8E-05 39.6 11.4 119 176-311 73-239 (336)
50 2e6f_A Dihydroorotate dehydrog 90.3 1.6 5.6E-05 39.7 10.3 111 175-310 32-187 (314)
51 1jub_A Dihydroorotate dehydrog 89.9 1.9 6.5E-05 39.2 10.3 78 209-311 93-186 (311)
52 3lg3_A Isocitrate lyase; conse 89.5 12 0.00042 36.0 15.8 34 172-206 275-309 (435)
53 1zlp_A PSR132, petal death pro 89.5 0.33 1.1E-05 45.2 4.7 45 168-217 189-233 (318)
54 3i4e_A Isocitrate lyase; struc 89.5 4.4 0.00015 39.2 12.7 34 172-206 275-309 (439)
55 1ydn_A Hydroxymethylglutaryl-C 89.4 2.1 7.1E-05 38.9 10.1 99 174-279 85-212 (295)
56 3fa4_A 2,3-dimethylmalate lyas 89.3 4.7 0.00016 37.1 12.3 84 171-266 173-260 (302)
57 4fo4_A Inosine 5'-monophosphat 89.3 3 0.0001 39.4 11.3 66 171-248 110-176 (366)
58 1xg4_A Probable methylisocitra 89.1 0.35 1.2E-05 44.5 4.6 84 169-265 168-255 (295)
59 1f8m_A Isocitrate lyase, ICL; 89.1 3.5 0.00012 39.8 11.7 33 172-205 271-304 (429)
60 3igs_A N-acetylmannosamine-6-p 88.9 1.1 3.8E-05 39.5 7.6 89 172-278 92-189 (232)
61 4g9p_A 4-hydroxy-3-methylbut-2 88.8 1.4 4.7E-05 42.2 8.5 49 170-219 40-91 (406)
62 1o66_A 3-methyl-2-oxobutanoate 88.8 5.2 0.00018 36.3 12.1 115 133-274 78-202 (275)
63 3eoo_A Methylisocitrate lyase; 88.7 0.4 1.4E-05 44.3 4.6 43 170-217 173-215 (298)
64 4ay7_A Methylcobalamin\: coenz 88.6 15 0.0005 33.9 16.3 84 173-265 254-345 (348)
65 3eol_A Isocitrate lyase; seatt 88.5 17 0.00057 35.1 16.0 34 172-206 270-304 (433)
66 3ble_A Citramalate synthase fr 88.4 8.7 0.0003 35.6 13.8 65 168-238 169-236 (337)
67 3ewb_X 2-isopropylmalate synth 88.3 11 0.00037 34.3 14.1 139 53-239 78-221 (293)
68 1s2w_A Phosphoenolpyruvate pho 88.0 0.55 1.9E-05 43.2 5.2 43 170-215 172-215 (295)
69 3q58_A N-acetylmannosamine-6-p 87.8 1.3 4.5E-05 39.0 7.3 89 172-278 92-189 (229)
70 1ydn_A Hydroxymethylglutaryl-C 87.8 3.8 0.00013 37.1 10.7 134 62-239 86-223 (295)
71 3ih1_A Methylisocitrate lyase; 87.7 0.32 1.1E-05 45.0 3.3 42 170-216 177-218 (305)
72 1to3_A Putative aldolase YIHT; 87.7 14 0.00047 33.8 14.5 93 174-270 114-223 (304)
73 3f4w_A Putative hexulose 6 pho 86.9 6.1 0.00021 33.4 11.0 91 174-275 70-166 (211)
74 3rmj_A 2-isopropylmalate synth 86.6 10 0.00035 35.7 13.2 137 53-238 85-227 (370)
75 3o1n_A 3-dehydroquinate dehydr 86.6 4.4 0.00015 36.7 10.3 103 170-277 121-230 (276)
76 2nx9_A Oxaloacetate decarboxyl 86.6 5.7 0.00019 38.7 11.7 96 173-275 105-208 (464)
77 2hjp_A Phosphonopyruvate hydro 86.2 0.58 2E-05 43.0 4.2 42 171-215 169-211 (290)
78 4ef8_A Dihydroorotate dehydrog 86.0 5 0.00017 37.7 10.6 78 209-310 126-220 (354)
79 4fxs_A Inosine-5'-monophosphat 85.5 6.3 0.00022 38.6 11.6 63 174-249 286-363 (496)
80 2ze3_A DFA0005; organic waste 85.5 1.3 4.4E-05 40.3 6.1 40 169-213 169-208 (275)
81 1m3u_A 3-methyl-2-oxobutanoate 85.4 13 0.00045 33.4 12.6 91 175-274 101-202 (264)
82 1vzw_A Phosphoribosyl isomeras 85.4 4 0.00014 35.5 9.2 98 173-278 89-198 (244)
83 2ekc_A AQ_1548, tryptophan syn 85.0 20 0.00069 31.7 15.6 89 174-273 115-211 (262)
84 3qja_A IGPS, indole-3-glycerol 84.7 7.3 0.00025 35.1 10.7 84 173-273 127-218 (272)
85 3hgj_A Chromate reductase; TIM 84.6 13 0.00046 34.4 12.9 111 160-273 141-293 (349)
86 3usb_A Inosine-5'-monophosphat 84.5 8.1 0.00028 38.0 11.8 63 174-249 311-388 (511)
87 1sfl_A 3-dehydroquinate dehydr 83.5 22 0.00076 31.1 13.2 104 170-278 85-196 (238)
88 3b8i_A PA4872 oxaloacetate dec 83.3 0.75 2.6E-05 42.2 3.5 38 171-213 171-208 (287)
89 4fo4_A Inosine 5'-monophosphat 83.1 13 0.00045 34.9 12.1 64 173-249 162-240 (366)
90 2nx9_A Oxaloacetate decarboxyl 82.8 33 0.0011 33.3 15.2 64 168-238 158-224 (464)
91 1vhn_A Putative flavin oxidore 82.5 4.2 0.00014 37.2 8.3 91 179-278 26-136 (318)
92 1z41_A YQJM, probable NADH-dep 82.4 25 0.00084 32.3 13.7 113 160-278 133-285 (338)
93 1oy0_A Ketopantoate hydroxymet 82.4 7.6 0.00026 35.3 9.8 116 133-274 95-220 (281)
94 1vs1_A 3-deoxy-7-phosphoheptul 82.2 16 0.00054 33.0 11.9 28 51-78 48-75 (276)
95 3b0p_A TRNA-dihydrouridine syn 82.2 5.1 0.00018 37.3 8.9 111 180-311 27-158 (350)
96 3eol_A Isocitrate lyase; seatt 81.8 34 0.0012 32.9 14.6 130 172-311 164-341 (433)
97 3lg3_A Isocitrate lyase; conse 81.7 30 0.001 33.4 14.1 131 172-312 171-347 (435)
98 1rqb_A Transcarboxylase 5S sub 81.6 12 0.00042 37.1 11.8 96 173-275 122-227 (539)
99 2ojp_A DHDPS, dihydrodipicolin 81.4 29 0.001 31.2 13.5 139 53-251 20-163 (292)
100 4h3d_A 3-dehydroquinate dehydr 81.4 13 0.00044 33.2 10.9 108 161-277 96-210 (258)
101 3i4e_A Isocitrate lyase; struc 81.2 41 0.0014 32.5 15.3 131 172-312 171-347 (439)
102 2ftp_A Hydroxymethylglutaryl-C 81.1 25 0.00085 31.8 13.0 99 174-279 89-216 (302)
103 4fxs_A Inosine-5'-monophosphat 80.8 11 0.00037 36.9 11.1 65 172-248 234-299 (496)
104 2pcq_A Putative dihydrodipicol 80.8 3.9 0.00013 37.0 7.3 99 161-278 16-128 (283)
105 4avf_A Inosine-5'-monophosphat 80.8 11 0.00038 36.8 11.1 63 174-249 284-361 (490)
106 3oix_A Putative dihydroorotate 80.6 7.7 0.00026 36.2 9.4 58 209-276 128-201 (345)
107 4h3d_A 3-dehydroquinate dehydr 80.4 7.9 0.00027 34.5 9.2 99 162-265 30-137 (258)
108 1thf_D HISF protein; thermophI 80.4 6 0.00021 34.4 8.3 99 173-278 88-203 (253)
109 1eep_A Inosine 5'-monophosphat 80.2 14 0.00049 34.8 11.4 66 171-248 155-221 (404)
110 1y0e_A Putative N-acetylmannos 79.9 12 0.00042 31.7 10.0 92 173-279 80-184 (223)
111 1zco_A 2-dehydro-3-deoxyphosph 79.8 32 0.0011 30.6 13.0 28 51-78 33-60 (262)
112 2yr1_A 3-dehydroquinate dehydr 79.2 22 0.00075 31.6 11.7 107 161-277 97-209 (257)
113 3m47_A Orotidine 5'-phosphate 79.1 15 0.0005 32.1 10.3 29 51-79 74-102 (228)
114 3vav_A 3-methyl-2-oxobutanoate 79.0 21 0.00071 32.3 11.5 91 175-274 113-214 (275)
115 4avf_A Inosine-5'-monophosphat 78.8 16 0.00055 35.6 11.5 66 171-248 231-297 (490)
116 3ffs_A Inosine-5-monophosphate 78.7 9.8 0.00034 36.3 9.7 65 172-249 147-212 (400)
117 3qze_A DHDPS, dihydrodipicolin 78.6 39 0.0013 30.8 19.0 149 53-261 42-197 (314)
118 1vrd_A Inosine-5'-monophosphat 78.5 18 0.0006 35.1 11.7 68 171-250 239-307 (494)
119 1vr6_A Phospho-2-dehydro-3-deo 78.2 17 0.00059 34.0 11.0 52 51-112 116-169 (350)
120 3tak_A DHDPS, dihydrodipicolin 77.1 41 0.0014 30.2 18.4 150 53-262 20-176 (291)
121 1geq_A Tryptophan synthase alp 76.4 15 0.0005 31.8 9.6 93 171-278 98-199 (248)
122 2uwf_A Endoxylanase, alkaline 76.4 17 0.00058 33.9 10.5 50 168-219 202-259 (356)
123 1rqb_A Transcarboxylase 5S sub 76.3 58 0.002 32.2 14.8 66 168-238 175-243 (539)
124 3khj_A Inosine-5-monophosphate 76.0 31 0.0011 32.2 12.3 65 171-248 107-172 (361)
125 1ur4_A Galactanase; hydrolase, 75.8 55 0.0019 31.0 20.6 112 161-277 130-269 (399)
126 2cw6_A Hydroxymethylglutaryl-C 75.7 14 0.00048 33.4 9.5 102 174-279 86-213 (298)
127 3eeg_A 2-isopropylmalate synth 75.5 6.1 0.00021 36.5 7.1 67 168-238 151-221 (325)
128 3si9_A DHDPS, dihydrodipicolin 75.2 49 0.0017 30.1 18.6 194 53-307 41-244 (315)
129 1h5y_A HISF; histidine biosynt 75.1 6.4 0.00022 33.8 6.8 101 174-279 92-207 (253)
130 3gr7_A NADPH dehydrogenase; fl 75.1 51 0.0018 30.3 15.2 130 164-311 39-243 (340)
131 2r91_A 2-keto-3-deoxy-(6-phosp 75.0 46 0.0016 29.7 13.0 105 53-214 17-127 (286)
132 3fgn_A Dethiobiotin synthetase 74.9 13 0.00043 33.0 8.8 120 161-309 111-243 (251)
133 3vav_A 3-methyl-2-oxobutanoate 74.6 2.7 9.4E-05 38.2 4.3 45 162-213 168-212 (275)
134 1ps9_A 2,4-dienoyl-COA reducta 74.6 35 0.0012 34.2 13.1 130 163-310 36-241 (671)
135 2v9d_A YAGE; dihydrodipicolini 74.6 54 0.0018 30.3 18.4 154 53-263 50-208 (343)
136 1o4u_A Type II quinolic acid p 74.4 5.4 0.00019 36.3 6.3 64 174-250 206-269 (285)
137 2qiw_A PEP phosphonomutase; st 73.4 2.5 8.5E-05 37.9 3.7 38 171-213 171-208 (255)
138 2hsa_B 12-oxophytodienoate red 73.3 49 0.0017 31.3 13.0 73 231-310 174-273 (402)
139 2v82_A 2-dehydro-3-deoxy-6-pho 73.2 20 0.0007 30.1 9.5 86 173-279 72-157 (212)
140 3na8_A Putative dihydrodipicol 72.9 56 0.0019 29.7 18.7 150 53-261 43-199 (315)
141 2qiw_A PEP phosphonomutase; st 72.8 46 0.0016 29.5 12.0 96 173-274 98-210 (255)
142 1aj0_A DHPS, dihydropteroate s 72.8 54 0.0019 29.5 16.1 149 133-312 14-178 (282)
143 4gj1_A 1-(5-phosphoribosyl)-5- 72.6 30 0.001 30.2 10.7 101 173-276 89-204 (243)
144 3r2g_A Inosine 5'-monophosphat 72.4 35 0.0012 32.0 11.5 67 170-248 101-168 (361)
145 1xky_A Dihydrodipicolinate syn 72.2 56 0.0019 29.4 18.7 148 53-260 31-185 (301)
146 1qpo_A Quinolinate acid phosph 72.0 7.9 0.00027 35.2 6.8 66 172-250 205-270 (284)
147 1qo2_A Molecule: N-((5-phospho 72.0 15 0.00052 31.7 8.5 99 173-278 87-196 (241)
148 1jub_A Dihydroorotate dehydrog 72.0 29 0.001 31.1 10.7 73 169-248 107-191 (311)
149 1jcn_A Inosine monophosphate d 71.9 43 0.0015 32.5 12.6 91 171-273 257-363 (514)
150 1ka9_F Imidazole glycerol phos 71.8 9.2 0.00031 33.2 7.0 99 173-278 89-204 (252)
151 3qfe_A Putative dihydrodipicol 71.7 60 0.002 29.6 19.3 193 53-307 30-237 (318)
152 1p0k_A Isopentenyl-diphosphate 71.7 25 0.00085 32.3 10.3 95 170-274 75-184 (349)
153 3gr7_A NADPH dehydrogenase; fl 71.5 37 0.0013 31.3 11.5 110 160-273 133-282 (340)
154 2ehh_A DHDPS, dihydrodipicolin 71.5 57 0.0019 29.2 18.5 152 53-261 19-175 (294)
155 2w6r_A Imidazole glycerol phos 71.4 10 0.00035 33.2 7.3 100 174-274 89-206 (266)
156 1eye_A DHPS 1, dihydropteroate 71.4 58 0.002 29.3 13.7 147 133-312 5-170 (280)
157 3k30_A Histamine dehydrogenase 71.2 74 0.0025 31.9 14.6 130 162-310 42-256 (690)
158 2dep_A Xylanase B, thermostabl 71.0 23 0.0008 32.9 10.0 50 168-219 201-258 (356)
159 3zwt_A Dihydroorotate dehydrog 70.9 21 0.00071 33.5 9.6 84 209-311 146-248 (367)
160 1o5k_A DHDPS, dihydrodipicolin 70.8 61 0.0021 29.3 18.3 154 53-263 31-189 (306)
161 2vc6_A MOSA, dihydrodipicolina 70.5 60 0.002 29.1 18.6 152 53-261 19-175 (292)
162 1yxy_A Putative N-acetylmannos 70.4 12 0.0004 32.2 7.4 91 172-278 92-194 (234)
163 2yxg_A DHDPS, dihydrodipicolin 70.1 61 0.0021 29.0 18.2 152 53-261 19-175 (289)
164 3bg3_A Pyruvate carboxylase, m 69.9 93 0.0032 31.9 14.9 65 168-238 261-328 (718)
165 1hjs_A Beta-1,4-galactanase; 4 69.8 60 0.0021 29.7 12.5 102 164-273 107-243 (332)
166 3flu_A DHDPS, dihydrodipicolin 69.7 63 0.0021 29.0 18.6 193 53-307 26-228 (297)
167 1w3i_A EDA, 2-keto-3-deoxy glu 69.6 46 0.0016 29.9 11.5 105 53-214 18-128 (293)
168 1ujp_A Tryptophan synthase alp 69.6 14 0.00047 33.2 7.8 89 174-273 112-207 (271)
169 3bo9_A Putative nitroalkan dio 69.6 34 0.0012 31.2 10.7 87 171-278 92-184 (326)
170 1icp_A OPR1, 12-oxophytodienoa 69.4 69 0.0024 29.9 13.0 75 230-311 169-270 (376)
171 1l6s_A Porphobilinogen synthas 69.3 70 0.0024 29.4 15.4 223 55-315 58-309 (323)
172 1nvm_A HOA, 4-hydroxy-2-oxoval 69.1 16 0.00056 33.7 8.5 94 174-276 99-202 (345)
173 2gjl_A Hypothetical protein PA 68.9 54 0.0019 29.6 11.9 83 171-273 86-177 (328)
174 2nuw_A 2-keto-3-deoxygluconate 68.1 52 0.0018 29.4 11.5 105 53-214 18-128 (288)
175 1w1z_A Delta-aminolevulinic ac 68.1 75 0.0026 29.3 14.5 222 55-315 64-316 (328)
176 3inp_A D-ribulose-phosphate 3- 68.0 13 0.00045 33.0 7.2 49 172-220 44-97 (246)
177 2nu8_B SCS-beta, succinyl-COA 67.7 42 0.0014 31.6 11.1 67 161-239 293-363 (388)
178 2b7n_A Probable nicotinate-nuc 67.7 9.8 0.00034 34.2 6.4 58 179-249 200-257 (273)
179 3a5f_A Dihydrodipicolinate syn 67.6 69 0.0023 28.6 16.2 152 53-262 20-176 (291)
180 3daq_A DHDPS, dihydrodipicolin 67.4 70 0.0024 28.6 17.1 191 53-307 21-224 (292)
181 2eja_A URO-D, UPD, uroporphyri 67.0 53 0.0018 29.8 11.5 81 173-265 244-334 (338)
182 2y88_A Phosphoribosyl isomeras 67.0 14 0.00047 31.8 7.1 98 173-278 88-201 (244)
183 1h7n_A 5-aminolaevulinic acid 66.6 82 0.0028 29.2 17.9 225 55-314 69-326 (342)
184 1m3u_A 3-methyl-2-oxobutanoate 66.5 5.3 0.00018 36.0 4.3 45 162-213 156-200 (264)
185 3b4u_A Dihydrodipicolinate syn 66.3 74 0.0025 28.5 16.8 154 53-262 22-184 (294)
186 1tx2_A DHPS, dihydropteroate s 65.9 31 0.0011 31.4 9.4 119 133-279 39-170 (297)
187 1ps9_A 2,4-dienoyl-COA reducta 65.7 62 0.0021 32.3 12.6 114 160-278 130-288 (671)
188 3u43_A Colicin-E2 immunity pro 65.7 4.1 0.00014 31.0 2.9 50 251-313 28-82 (94)
189 2jbm_A Nicotinate-nucleotide p 65.6 12 0.00042 34.1 6.6 59 178-249 214-272 (299)
190 3glc_A Aldolase LSRF; TIM barr 65.3 49 0.0017 30.0 10.7 88 176-273 133-228 (295)
191 3l5l_A Xenobiotic reductase A; 64.6 39 0.0013 31.4 10.2 114 160-278 147-303 (363)
192 1zlp_A PSR132, petal death pro 64.5 60 0.002 29.8 11.1 96 173-276 121-233 (318)
193 3usb_A Inosine-5'-monophosphat 64.5 78 0.0027 30.9 12.7 66 171-248 258-324 (511)
194 3tdn_A FLR symmetric alpha-bet 64.1 2.7 9.4E-05 36.8 1.9 98 174-278 94-208 (247)
195 3bw2_A 2-nitropropane dioxygen 63.7 78 0.0027 29.2 12.1 84 171-273 112-213 (369)
196 3m5v_A DHDPS, dihydrodipicolin 63.4 85 0.0029 28.2 18.8 151 53-262 26-184 (301)
197 3kru_A NADH:flavin oxidoreduct 63.2 41 0.0014 31.1 9.9 111 160-273 132-282 (343)
198 2gou_A Oxidoreductase, FMN-bin 62.5 74 0.0025 29.5 11.6 115 160-278 150-301 (365)
199 3tha_A Tryptophan synthase alp 62.2 52 0.0018 29.2 10.0 88 174-273 109-204 (252)
200 1zco_A 2-dehydro-3-deoxyphosph 62.0 85 0.0029 27.8 11.6 44 171-216 40-94 (262)
201 1o66_A 3-methyl-2-oxobutanoate 62.0 7.2 0.00025 35.4 4.3 40 168-213 161-200 (275)
202 2rfg_A Dihydrodipicolinate syn 61.9 90 0.0031 28.0 17.5 193 53-307 19-221 (297)
203 2z6i_A Trans-2-enoyl-ACP reduc 61.8 43 0.0015 30.5 9.7 85 170-273 77-167 (332)
204 1to3_A Putative aldolase YIHT; 61.7 93 0.0032 28.1 12.7 46 168-214 177-227 (304)
205 2ztj_A Homocitrate synthase; ( 61.6 69 0.0024 30.0 11.3 95 174-276 80-197 (382)
206 3paj_A Nicotinate-nucleotide p 61.5 23 0.0008 32.7 7.7 59 176-250 246-304 (320)
207 3fkr_A L-2-keto-3-deoxyarabona 61.2 95 0.0032 28.0 20.1 152 53-262 27-187 (309)
208 1f6k_A N-acetylneuraminate lya 61.1 91 0.0031 27.8 17.5 149 53-261 22-178 (293)
209 4e38_A Keto-hydroxyglutarate-a 61.0 60 0.0021 28.4 10.1 86 172-279 97-183 (232)
210 3tqv_A Nicotinate-nucleotide p 60.9 15 0.0005 33.6 6.1 62 173-250 210-271 (287)
211 3eoo_A Methylisocitrate lyase; 60.8 73 0.0025 28.9 10.9 95 174-276 104-215 (298)
212 2r8w_A AGR_C_1641P; APC7498, d 60.8 1E+02 0.0034 28.2 19.4 139 53-251 53-196 (332)
213 2wkj_A N-acetylneuraminate lya 60.7 95 0.0033 27.9 17.6 152 53-261 30-186 (303)
214 3mcm_A 2-amino-4-hydroxy-6-hyd 60.6 1.2E+02 0.0042 29.1 12.9 156 132-311 189-358 (442)
215 4hb7_A Dihydropteroate synthas 60.5 95 0.0033 27.8 12.5 143 133-311 6-162 (270)
216 1pv8_A Delta-aminolevulinic ac 60.5 1.1E+02 0.0036 28.3 11.9 224 55-313 59-314 (330)
217 3l0g_A Nicotinate-nucleotide p 60.2 14 0.00048 33.9 5.9 61 174-250 220-280 (300)
218 3fs2_A 2-dehydro-3-deoxyphosph 60.0 1E+02 0.0035 28.0 15.0 160 49-276 49-222 (298)
219 1r3s_A URO-D, uroporphyrinogen 59.7 1.1E+02 0.0036 28.2 14.0 82 174-265 269-359 (367)
220 3s5o_A 4-hydroxy-2-oxoglutarat 59.7 1E+02 0.0034 27.8 16.7 149 53-261 33-190 (307)
221 3tsm_A IGPS, indole-3-glycerol 59.4 44 0.0015 30.0 9.1 64 173-251 134-198 (272)
222 1wa3_A 2-keto-3-deoxy-6-phosph 59.0 59 0.002 26.9 9.5 83 174-279 76-159 (205)
223 2fp4_B Succinyl-COA ligase [GD 58.9 38 0.0013 32.0 9.0 67 161-239 300-370 (395)
224 3l21_A DHDPS, dihydrodipicolin 58.9 1E+02 0.0035 27.7 17.7 150 53-260 34-188 (304)
225 3ist_A Glutamate racemase; str 58.6 22 0.00075 31.8 6.9 35 156-191 43-79 (269)
226 1rpx_A Protein (ribulose-phosp 58.6 39 0.0013 28.8 8.4 84 171-265 26-116 (230)
227 3ovp_A Ribulose-phosphate 3-ep 58.4 14 0.00048 32.2 5.4 49 172-220 21-75 (228)
228 2z6i_A Trans-2-enoyl-ACP reduc 58.2 82 0.0028 28.6 11.0 87 174-274 29-116 (332)
229 1xg4_A Probable methylisocitra 58.0 87 0.003 28.4 10.9 97 173-277 99-212 (295)
230 1ep3_A Dihydroorotate dehydrog 57.9 90 0.0031 27.6 11.1 99 170-279 113-250 (311)
231 1ydo_A HMG-COA lyase; TIM-barr 57.9 69 0.0024 29.0 10.3 95 174-275 87-208 (307)
232 1qop_A Tryptophan synthase alp 57.9 56 0.0019 28.8 9.5 91 171-266 34-146 (268)
233 3cpr_A Dihydrodipicolinate syn 57.9 1.1E+02 0.0037 27.6 18.4 149 53-261 35-190 (304)
234 3vni_A Xylose isomerase domain 57.9 92 0.0032 26.9 13.6 134 165-308 129-285 (294)
235 2ze3_A DFA0005; organic waste 57.7 1.1E+02 0.0036 27.5 12.2 93 174-274 98-210 (275)
236 1ur1_A Endoxylanase; hydrolase 57.3 23 0.0008 33.3 7.2 50 168-219 209-266 (378)
237 3khj_A Inosine-5-monophosphate 57.0 88 0.003 29.0 11.1 87 173-273 61-150 (361)
238 2o0t_A Diaminopimelate decarbo 56.8 85 0.0029 29.9 11.3 70 179-251 130-215 (467)
239 1vyr_A Pentaerythritol tetrani 56.8 1.2E+02 0.0042 28.0 12.4 112 161-273 151-299 (364)
240 1fr2_A Colicin E9 immunity pro 56.7 7.4 0.00025 29.0 2.8 51 249-312 26-81 (86)
241 3m47_A Orotidine 5'-phosphate 56.6 29 0.00098 30.1 7.2 34 174-207 84-117 (228)
242 1fob_A Beta-1,4-galactanase; B 56.6 1.2E+02 0.004 27.6 13.0 105 166-278 110-249 (334)
243 2ekc_A AQ_1548, tryptophan syn 56.5 62 0.0021 28.4 9.6 91 171-266 34-146 (262)
244 1r85_A Endo-1,4-beta-xylanase; 56.2 24 0.00083 33.2 7.1 50 168-219 212-269 (379)
245 1oy0_A Ketopantoate hydroxymet 55.9 13 0.00045 33.8 4.9 41 167-213 178-218 (281)
246 2ztj_A Homocitrate synthase; ( 55.4 1.3E+02 0.0046 27.9 15.7 135 53-239 76-213 (382)
247 1f76_A Dihydroorotate dehydrog 55.3 55 0.0019 29.7 9.3 79 165-250 150-246 (336)
248 3b8i_A PA4872 oxaloacetate dec 55.3 1.2E+02 0.0041 27.3 13.2 94 173-275 102-211 (287)
249 1gte_A Dihydropyrimidine dehyd 54.9 30 0.001 36.7 8.3 67 203-275 628-710 (1025)
250 3bg3_A Pyruvate carboxylase, m 54.7 45 0.0015 34.2 9.2 98 174-276 203-313 (718)
251 2yw3_A 4-hydroxy-2-oxoglutarat 54.2 55 0.0019 27.8 8.5 86 172-279 74-160 (207)
252 1ep3_A Dihydroorotate dehydrog 54.0 48 0.0016 29.4 8.5 60 209-274 98-170 (311)
253 1j93_A UROD, uroporphyrinogen 53.8 68 0.0023 29.2 9.7 23 176-198 262-284 (353)
254 3gnn_A Nicotinate-nucleotide p 53.5 23 0.00078 32.4 6.2 61 174-250 222-282 (298)
255 1vli_A Spore coat polysacchari 53.3 75 0.0026 30.0 9.9 121 173-307 126-277 (385)
256 1gxg_A Colicin E8 immunity pro 52.8 8.6 0.0003 28.6 2.6 45 254-311 30-79 (85)
257 3uhf_A Glutamate racemase; str 52.5 28 0.00094 31.3 6.5 42 156-198 62-107 (274)
258 2p10_A MLL9387 protein; putati 52.4 60 0.0021 29.4 8.7 72 172-251 174-261 (286)
259 3out_A Glutamate racemase; str 52.2 23 0.00077 31.7 5.9 32 156-188 45-76 (268)
260 3k30_A Histamine dehydrogenase 51.6 1.8E+02 0.006 29.1 13.1 113 159-273 144-299 (690)
261 2qgh_A Diaminopimelate decarbo 51.4 1.6E+02 0.0053 27.5 12.7 73 176-251 119-205 (425)
262 1qop_A Tryptophan synthase alp 51.4 52 0.0018 29.0 8.2 89 174-273 115-210 (268)
263 3fk8_A Disulphide isomerase; A 51.2 45 0.0015 25.1 6.9 114 188-306 10-131 (133)
264 2e6f_A Dihydroorotate dehydrog 51.1 60 0.002 29.0 8.7 71 170-247 108-193 (314)
265 3hgj_A Chromate reductase; TIM 51.0 55 0.0019 30.1 8.6 28 55-82 37-64 (349)
266 4dpp_A DHDPS 2, dihydrodipicol 51.0 1.6E+02 0.0054 27.5 12.9 47 53-105 78-125 (360)
267 2qf7_A Pyruvate carboxylase pr 50.9 99 0.0034 33.5 11.6 99 173-276 650-760 (1165)
268 3ble_A Citramalate synthase fr 50.8 61 0.0021 29.7 8.8 96 174-275 102-220 (337)
269 3of5_A Dethiobiotin synthetase 50.3 30 0.001 29.8 6.3 102 161-275 94-206 (228)
270 1unk_A Colicin E7; immunity pr 50.2 8.2 0.00028 28.9 2.1 44 256-312 34-82 (87)
271 3r79_A Uncharacterized protein 50.2 76 0.0026 27.8 9.0 94 182-278 98-199 (244)
272 3d0c_A Dihydrodipicolinate syn 50.2 1.5E+02 0.005 26.8 19.4 145 53-261 31-181 (314)
273 3ih1_A Methylisocitrate lyase; 50.0 1.5E+02 0.0051 26.9 12.3 93 173-275 109-218 (305)
274 2gjl_A Hypothetical protein PA 49.8 1.4E+02 0.005 26.7 12.6 94 173-275 31-125 (328)
275 1w5q_A Delta-aminolevulinic ac 49.7 1.6E+02 0.0055 27.2 16.7 219 55-311 66-318 (337)
276 3r2g_A Inosine 5'-monophosphat 49.7 1.6E+02 0.0056 27.3 12.1 27 51-77 95-121 (361)
277 1n82_A Xylanase, intra-cellula 49.1 34 0.0012 31.3 6.8 51 167-219 187-245 (331)
278 3dm5_A SRP54, signal recogniti 49.1 1.8E+02 0.0063 27.7 13.5 103 172-282 173-279 (443)
279 1jvn_A Glutamine, bifunctional 49.1 48 0.0016 32.7 8.2 101 173-278 352-504 (555)
280 3obk_A Delta-aminolevulinic ac 49.1 1.7E+02 0.0057 27.2 17.1 206 54-289 72-308 (356)
281 1u83_A Phosphosulfolactate syn 49.1 52 0.0018 29.7 7.7 132 161-312 50-187 (276)
282 1o94_A Tmadh, trimethylamine d 48.8 1.1E+02 0.0039 30.8 11.3 106 164-278 39-226 (729)
283 4f2d_A L-arabinose isomerase; 48.3 1E+02 0.0034 30.1 10.3 42 162-203 23-67 (500)
284 4af0_A Inosine-5'-monophosphat 48.2 33 0.0011 34.1 6.7 47 170-216 282-329 (556)
285 1rd5_A Tryptophan synthase alp 48.2 1.1E+02 0.0036 26.6 9.7 86 177-273 114-206 (262)
286 3b0p_A TRNA-dihydrouridine syn 47.9 1.5E+02 0.0053 27.1 11.1 102 169-278 71-205 (350)
287 3tr9_A Dihydropteroate synthas 47.6 1.7E+02 0.0057 26.8 11.7 115 133-280 27-160 (314)
288 1w32_A Endo-1,4-beta-xylanase 47.6 34 0.0011 31.7 6.5 50 168-219 192-251 (348)
289 3oix_A Putative dihydroorotate 47.5 1.2E+02 0.0041 28.0 10.3 60 170-238 143-214 (345)
290 1xyz_A 1,4-beta-D-xylan-xylano 47.5 1.2E+02 0.0042 27.7 10.4 49 168-218 209-267 (347)
291 1x1o_A Nicotinate-nucleotide p 47.1 40 0.0014 30.5 6.7 56 177-248 212-267 (286)
292 4ab4_A Xenobiotic reductase B; 47.0 1E+02 0.0034 28.7 9.7 110 160-273 142-284 (362)
293 2w5f_A Endo-1,4-beta-xylanase 47.0 1E+02 0.0034 30.2 10.2 50 168-219 394-453 (540)
294 3o1n_A 3-dehydroquinate dehydr 47.0 1.6E+02 0.0053 26.3 13.0 100 162-266 50-158 (276)
295 1f8m_A Isocitrate lyase, ICL; 46.8 2E+02 0.0069 27.5 14.7 132 172-311 167-342 (429)
296 3r89_A Orotidine 5'-phosphate 46.7 19 0.00064 32.9 4.4 109 162-278 41-160 (290)
297 3dz1_A Dihydrodipicolinate syn 46.7 1.6E+02 0.0056 26.4 18.0 195 53-307 27-234 (313)
298 1i4n_A Indole-3-glycerol phosp 46.4 88 0.003 27.6 8.8 64 173-251 115-180 (251)
299 4ed9_A CAIB/BAIF family protei 46.2 29 0.001 32.7 5.9 40 50-94 81-120 (385)
300 2c6q_A GMP reductase 2; TIM ba 46.0 1.8E+02 0.006 26.8 11.2 65 172-248 121-188 (351)
301 2y5s_A DHPS, dihydropteroate s 45.8 1E+02 0.0034 27.9 9.2 151 133-312 22-186 (294)
302 3vab_A Diaminopimelate decarbo 45.6 2E+02 0.0067 27.2 11.8 69 179-250 138-220 (443)
303 3niy_A Endo-1,4-beta-xylanase; 45.6 1.8E+02 0.0062 26.7 11.6 47 168-216 203-256 (341)
304 3ubm_A COAT2, formyl-COA:oxala 45.5 41 0.0014 32.5 6.9 40 50-94 99-138 (456)
305 3ajx_A 3-hexulose-6-phosphate 45.1 1.3E+02 0.0044 24.8 10.7 92 174-277 70-167 (207)
306 3ivs_A Homocitrate synthase, m 45.1 2.1E+02 0.0072 27.2 14.0 63 170-239 182-247 (423)
307 1u1j_A 5-methyltetrahydroptero 45.1 1.3E+02 0.0044 30.9 11.0 80 163-252 181-270 (765)
308 3lye_A Oxaloacetate acetyl hyd 44.6 1.4E+02 0.0047 27.3 10.0 91 173-272 108-219 (307)
309 2csu_A 457AA long hypothetical 44.5 1.6E+02 0.0055 28.1 11.0 84 169-265 355-446 (457)
310 3cqj_A L-ribulose-5-phosphate 44.3 63 0.0022 28.1 7.6 103 164-275 143-263 (295)
311 3eb2_A Putative dihydrodipicol 44.3 1.7E+02 0.006 26.1 19.7 191 53-307 23-225 (300)
312 3jr2_A Hexulose-6-phosphate sy 44.1 1.4E+02 0.0049 25.0 9.7 91 174-277 76-175 (218)
313 2vp8_A Dihydropteroate synthas 44.1 1.9E+02 0.0065 26.4 11.1 117 133-279 41-171 (318)
314 4af0_A Inosine-5'-monophosphat 43.6 2.5E+02 0.0087 27.8 13.7 65 173-250 335-414 (556)
315 1gte_A Dihydropyrimidine dehyd 43.6 1.9E+02 0.0066 30.5 12.3 71 169-248 649-734 (1025)
316 2r14_A Morphinone reductase; H 43.5 1.4E+02 0.0048 27.7 10.2 114 161-278 156-307 (377)
317 1vhc_A Putative KHG/KDPG aldol 43.5 1.3E+02 0.0044 25.8 9.3 83 172-279 80-166 (224)
318 1pv8_A Delta-aminolevulinic ac 43.5 10 0.00035 35.0 2.1 25 51-75 294-318 (330)
319 2lnd_A De novo designed protei 43.3 40 0.0014 24.8 4.9 57 251-308 35-100 (112)
320 1a0c_A Xylose isomerase; ketol 43.3 51 0.0017 31.6 7.2 80 166-250 208-298 (438)
321 3lab_A Putative KDPG (2-keto-3 42.7 1.5E+02 0.005 25.7 9.4 85 172-279 76-168 (217)
322 4e4r_A Phosphate acetyltransfe 42.6 10 0.00035 35.2 2.0 123 5-147 1-136 (331)
323 3e96_A Dihydrodipicolinate syn 42.6 1.9E+02 0.0065 26.0 17.2 135 53-252 31-170 (316)
324 3sz8_A 2-dehydro-3-deoxyphosph 42.6 97 0.0033 28.0 8.5 93 173-277 103-204 (285)
325 2yci_X 5-methyltetrahydrofolat 42.5 1.8E+02 0.0062 25.8 14.0 93 173-279 39-138 (271)
326 1w1z_A Delta-aminolevulinic ac 42.3 11 0.00039 34.7 2.2 25 51-75 294-318 (328)
327 3ufx_B Succinyl-COA synthetase 42.1 87 0.003 29.5 8.5 85 161-263 284-373 (397)
328 3emz_A Xylanase, endo-1,4-beta 41.9 47 0.0016 30.6 6.5 47 168-216 187-240 (331)
329 3aty_A Tcoye, prostaglandin F2 41.8 1.2E+02 0.0041 28.3 9.4 113 159-273 161-312 (379)
330 1h7n_A 5-aminolaevulinic acid 41.7 11 0.00039 35.0 2.1 25 51-75 305-329 (342)
331 1i1w_A Endo-1,4-beta-xylanase; 41.7 62 0.0021 29.1 7.2 76 168-251 185-267 (303)
332 3txv_A Probable tagatose 6-pho 41.7 66 0.0023 31.1 7.6 72 230-308 8-80 (450)
333 3tml_A 2-dehydro-3-deoxyphosph 41.6 2E+02 0.0068 25.9 14.4 90 174-276 101-204 (288)
334 1l6s_A Porphobilinogen synthas 41.5 12 0.0004 34.6 2.1 25 51-75 287-311 (323)
335 2gzm_A Glutamate racemase; enz 41.4 1.1E+02 0.0038 26.8 8.7 35 156-191 41-77 (267)
336 1rpx_A Protein (ribulose-phosp 41.1 45 0.0015 28.3 5.9 41 173-216 83-125 (230)
337 2jfz_A Glutamate racemase; cel 40.9 44 0.0015 29.2 5.9 41 156-197 38-82 (255)
338 3cyv_A URO-D, UPD, uroporphyri 40.8 2.1E+02 0.0071 25.9 11.8 83 174-266 256-348 (354)
339 2inf_A URO-D, UPD, uroporphyri 40.7 1.2E+02 0.004 27.8 9.0 24 174-197 258-281 (359)
340 3n2b_A Diaminopimelate decarbo 40.6 2.1E+02 0.0071 27.0 11.1 71 177-250 139-223 (441)
341 4adt_A Pyridoxine biosynthetic 40.5 8.5 0.00029 35.2 1.1 90 174-279 93-218 (297)
342 2hsa_B 12-oxophytodienoate red 40.4 2.4E+02 0.0081 26.5 11.6 110 163-273 166-324 (402)
343 2hjp_A Phosphonopyruvate hydro 40.3 2.1E+02 0.007 25.7 13.3 98 173-275 95-212 (290)
344 3dxi_A Putative aldolase; TIM 40.2 87 0.003 28.6 8.0 90 179-275 98-193 (320)
345 4a0g_A Adenosylmethionine-8-am 40.1 39 0.0013 35.2 6.1 104 161-276 175-293 (831)
346 3obk_A Delta-aminolevulinic ac 39.9 13 0.00043 34.7 2.1 25 51-75 308-332 (356)
347 1ypf_A GMP reductase; GUAC, pu 39.7 2.2E+02 0.0074 25.8 11.3 93 172-278 109-218 (336)
348 1mxs_A KDPG aldolase; 2-keto-3 39.6 1.3E+02 0.0044 25.9 8.6 83 172-279 89-175 (225)
349 1zfj_A Inosine monophosphate d 39.5 1.7E+02 0.0059 27.8 10.4 66 172-249 236-302 (491)
350 3nav_A Tryptophan synthase alp 39.2 95 0.0033 27.7 7.9 45 224-277 61-108 (271)
351 4ew6_A D-galactose-1-dehydroge 39.2 46 0.0016 30.2 5.9 45 169-216 93-139 (330)
352 3ixl_A Amdase, arylmalonate de 39.0 21 0.00073 31.2 3.5 42 230-272 55-102 (240)
353 1w5q_A Delta-aminolevulinic ac 39.0 15 0.0005 34.1 2.4 24 51-75 301-324 (337)
354 3sy1_A UPF0001 protein YGGS; e 38.9 69 0.0024 28.0 6.8 67 182-251 98-167 (245)
355 2yv4_A Hypothetical protein PH 38.9 56 0.0019 24.8 5.4 45 162-206 53-97 (105)
356 1zuw_A Glutamate racemase 1; ( 38.2 71 0.0024 28.2 6.9 31 161-191 45-78 (272)
357 2hk0_A D-psicose 3-epimerase; 38.2 1.1E+02 0.0039 26.6 8.4 135 165-308 148-304 (309)
358 1tqj_A Ribulose-phosphate 3-ep 38.1 51 0.0017 28.4 5.8 40 174-216 78-119 (230)
359 1s2w_A Phosphoenolpyruvate pho 37.9 2.3E+02 0.0077 25.5 16.5 99 174-277 100-218 (295)
360 4dnh_A Uncharacterized protein 37.8 2.1E+02 0.0072 26.7 9.8 127 88-252 90-235 (396)
361 2qul_A D-tagatose 3-epimerase; 37.5 1.1E+02 0.0039 26.1 8.1 137 164-309 129-287 (290)
362 1us2_A Xylanase10C, endo-beta- 37.5 61 0.0021 32.0 6.8 50 168-219 360-417 (530)
363 3bo9_A Putative nitroalkan dio 37.2 2.3E+02 0.0079 25.5 10.8 74 173-255 42-115 (326)
364 1tqx_A D-ribulose-5-phosphate 37.2 93 0.0032 26.9 7.3 88 172-259 22-133 (227)
365 2dqw_A Dihydropteroate synthas 37.2 2.3E+02 0.008 25.5 11.4 151 133-312 28-192 (294)
366 1lc0_A Biliverdin reductase A; 37.0 58 0.002 28.9 6.1 45 169-216 77-123 (294)
367 1qap_A Quinolinic acid phospho 37.0 63 0.0021 29.3 6.4 56 178-249 225-280 (296)
368 3o9z_A Lipopolysaccaride biosy 37.0 48 0.0017 29.8 5.7 25 179-204 70-94 (312)
369 1pii_A N-(5'phosphoribosyl)ant 37.0 1.5E+02 0.0051 28.6 9.3 64 173-251 122-186 (452)
370 1h1y_A D-ribulose-5-phosphate 37.0 90 0.0031 26.5 7.2 89 174-275 80-180 (228)
371 3nvt_A 3-deoxy-D-arabino-heptu 36.8 2.7E+02 0.0092 26.1 12.8 31 48-78 149-179 (385)
372 3rmj_A 2-isopropylmalate synth 36.7 1.7E+02 0.0058 27.2 9.5 98 173-276 92-212 (370)
373 3gka_A N-ethylmaleimide reduct 36.7 2E+02 0.0068 26.6 10.0 109 162-273 155-292 (361)
374 4f8x_A Endo-1,4-beta-xylanase; 36.7 91 0.0031 28.7 7.5 47 168-216 191-245 (335)
375 3f4w_A Putative hexulose 6 pho 36.6 1.7E+02 0.0057 24.1 8.7 83 173-266 18-102 (211)
376 1qwg_A PSL synthase;, (2R)-pho 36.5 1E+02 0.0035 27.4 7.4 119 180-312 37-163 (251)
377 1tv5_A Dhodehase, dihydroorota 36.2 2.1E+02 0.0073 27.3 10.3 22 166-188 195-216 (443)
378 3cpg_A Uncharacterized protein 36.2 73 0.0025 28.2 6.7 67 182-251 135-204 (282)
379 2vvt_A Glutamate racemase; iso 36.1 1.4E+02 0.0049 26.5 8.7 31 161-191 66-96 (290)
380 3tjx_A Dihydroorotate dehydrog 36.1 1.1E+02 0.0036 28.1 8.0 58 209-275 126-200 (354)
381 3ru6_A Orotidine 5'-phosphate 36.0 78 0.0027 28.8 6.8 99 171-275 93-198 (303)
382 4fb5_A Probable oxidoreductase 35.8 44 0.0015 30.3 5.3 45 169-216 106-152 (393)
383 3a9s_A D-arabinose isomerase; 35.4 3.5E+02 0.012 27.0 12.3 84 181-275 57-145 (595)
384 3fa4_A 2,3-dimethylmalate lyas 35.4 2.5E+02 0.0087 25.4 10.4 92 173-273 100-212 (302)
385 3hbl_A Pyruvate carboxylase; T 35.2 4.6E+02 0.016 28.3 14.7 64 168-238 692-758 (1150)
386 1v0l_A Endo-1,4-beta-xylanase 34.9 40 0.0014 30.7 4.7 75 169-251 184-266 (313)
387 3t7v_A Methylornithine synthas 34.9 1.5E+02 0.0051 26.7 8.7 72 172-251 153-239 (350)
388 2wx4_A DCP1, decapping protein 34.8 14 0.00048 24.2 1.1 17 51-67 23-39 (46)
389 3eeg_A 2-isopropylmalate synth 34.5 87 0.003 28.6 7.0 97 173-275 86-205 (325)
390 1dqu_A Isocitrate lyase; beta 34.4 51 0.0017 32.6 5.6 45 173-220 381-426 (538)
391 3l52_A Orotidine 5'-phosphate 34.4 69 0.0024 28.9 6.2 109 162-278 44-165 (284)
392 3iwp_A Copper homeostasis prot 34.3 2.5E+02 0.0085 25.3 9.8 110 161-280 105-219 (287)
393 3u7b_A Endo-1,4-beta-xylanase; 34.2 95 0.0032 28.4 7.2 47 168-216 184-245 (327)
394 2eq5_A 228AA long hypothetical 34.2 1.5E+02 0.0052 24.8 8.2 75 192-272 19-101 (228)
395 3e82_A Putative oxidoreductase 34.2 54 0.0018 30.0 5.6 45 169-216 79-125 (364)
396 1tqj_A Ribulose-phosphate 3-ep 34.1 60 0.0021 27.9 5.6 49 171-220 20-73 (230)
397 3sig_A PArg, poly(ADP-ribose) 34.0 1.3E+02 0.0045 27.0 7.9 65 91-188 189-256 (277)
398 2ocz_A 3-dehydroquinate dehydr 33.8 2.3E+02 0.0078 24.4 9.8 101 161-277 75-182 (231)
399 3ffs_A Inosine-5-monophosphate 33.8 1.1E+02 0.0037 29.0 7.7 62 174-248 198-274 (400)
400 3u3x_A Oxidoreductase; structu 33.7 66 0.0023 29.4 6.1 45 169-216 100-146 (361)
401 1twi_A Diaminopimelate decarbo 33.7 2.9E+02 0.01 25.6 11.2 71 177-250 123-209 (434)
402 3uuw_A Putative oxidoreductase 33.6 58 0.002 28.8 5.6 45 169-216 78-124 (308)
403 2poz_A Putative dehydratase; o 33.6 2.3E+02 0.0079 26.0 10.0 98 162-273 137-255 (392)
404 3oqb_A Oxidoreductase; structu 33.6 43 0.0015 30.7 4.8 44 170-216 96-141 (383)
405 2oho_A Glutamate racemase; iso 33.5 1.6E+02 0.0055 25.8 8.5 28 161-188 54-81 (273)
406 3hdg_A Uncharacterized protein 33.5 1.4E+02 0.0048 21.8 7.4 74 180-265 50-124 (137)
407 1xi3_A Thiamine phosphate pyro 33.5 1.7E+02 0.0056 24.0 8.2 83 175-279 80-171 (215)
408 1f6y_A 5-methyltetrahydrofolat 33.4 2.5E+02 0.0085 24.7 13.6 90 173-276 30-124 (262)
409 2jfq_A Glutamate racemase; cel 33.4 1.5E+02 0.0051 26.3 8.3 31 161-191 64-96 (286)
410 2yr1_A 3-dehydroquinate dehydr 33.2 2.5E+02 0.0084 24.6 13.6 101 162-266 30-138 (257)
411 2wx3_A MRNA-decapping enzyme 1 33.2 21 0.00073 23.8 1.8 18 50-67 24-41 (51)
412 4gvf_A Beta-hexosaminidase; TI 33.1 42 0.0014 31.3 4.6 56 211-276 3-62 (349)
413 2wqp_A Polysialic acid capsule 32.8 1.9E+02 0.0065 26.8 9.1 129 168-307 91-265 (349)
414 1p1x_A Deoxyribose-phosphate a 32.7 19 0.00066 32.2 2.1 29 50-78 145-174 (260)
415 1e0t_A Pyruvate kinase, PK; ph 32.7 1.1E+02 0.0038 29.6 7.7 71 137-216 149-221 (470)
416 2p10_A MLL9387 protein; putati 32.5 1.1E+02 0.0037 27.7 7.1 80 22-108 131-224 (286)
417 2vws_A YFAU, 2-keto-3-deoxy su 32.5 2.5E+02 0.0087 24.5 9.8 78 173-263 31-112 (267)
418 2zbt_A Pyridoxal biosynthesis 32.5 18 0.00062 32.4 1.9 22 258-279 197-218 (297)
419 3hbl_A Pyruvate carboxylase; T 32.5 3.8E+02 0.013 28.9 12.5 99 174-276 633-743 (1150)
420 3oa2_A WBPB; oxidoreductase, s 32.4 58 0.002 29.3 5.4 31 179-213 71-101 (318)
421 2r14_A Morphinone reductase; H 32.1 1E+02 0.0036 28.7 7.2 15 67-81 53-67 (377)
422 2dwu_A Glutamate racemase; iso 32.1 1.2E+02 0.004 26.8 7.3 29 161-189 49-77 (276)
423 1ypx_A Putative vitamin-B12 in 32.0 75 0.0026 29.6 6.2 17 173-189 256-273 (375)
424 2o7s_A DHQ-SDH PR, bifunctiona 32.0 2.2E+02 0.0075 27.5 9.9 97 173-277 84-183 (523)
425 3c2e_A Nicotinate-nucleotide p 31.8 27 0.00093 31.7 3.0 59 179-250 217-278 (294)
426 1tlt_A Putative oxidoreductase 31.8 80 0.0027 28.0 6.2 45 169-216 77-123 (319)
427 1xim_A D-xylose isomerase; iso 31.6 1.3E+02 0.0043 27.8 7.8 71 165-238 156-235 (393)
428 4gqa_A NAD binding oxidoreduct 31.5 67 0.0023 29.8 5.8 45 169-216 108-154 (412)
429 2d59_A Hypothetical protein PH 31.4 1E+02 0.0036 24.2 6.2 59 181-253 77-135 (144)
430 1zu4_A FTSY; GTPase, signal re 31.3 2.9E+02 0.0099 24.8 10.4 116 174-302 184-307 (320)
431 3ff4_A Uncharacterized protein 31.2 90 0.0031 24.2 5.6 57 182-253 59-115 (122)
432 1o94_A Tmadh, trimethylamine d 31.1 4E+02 0.014 26.7 12.0 111 160-273 138-296 (729)
433 3grf_A Ornithine carbamoyltran 31.1 2.1E+02 0.0073 26.2 9.0 77 191-279 54-130 (328)
434 1rd5_A Tryptophan synthase alp 31.0 1.6E+02 0.0056 25.3 8.0 24 253-276 79-104 (262)
435 2p3e_A Diaminopimelate decarbo 30.9 2.6E+02 0.0087 25.8 9.9 71 177-250 119-203 (420)
436 3qz6_A HPCH/HPAI aldolase; str 30.9 2.7E+02 0.0092 24.3 9.8 79 173-264 29-111 (261)
437 2yim_A Probable alpha-methylac 30.9 95 0.0033 28.8 6.7 41 49-94 59-99 (360)
438 1o60_A 2-dehydro-3-deoxyphosph 30.7 2.1E+02 0.0073 25.7 8.8 156 51-273 28-198 (292)
439 3gdo_A Uncharacterized oxidore 30.6 79 0.0027 28.8 6.1 45 169-216 77-123 (358)
440 2qgy_A Enolase from the enviro 30.5 3E+02 0.01 25.3 10.2 93 171-273 154-250 (391)
441 3h5d_A DHDPS, dihydrodipicolin 30.5 3E+02 0.01 24.7 17.5 140 53-252 26-171 (311)
442 1vzw_A Phosphoribosyl isomeras 30.4 1.3E+02 0.0044 25.6 7.1 99 172-289 36-142 (244)
443 3jr2_A Hexulose-6-phosphate sy 30.3 1.9E+02 0.0066 24.2 8.2 89 174-273 25-114 (218)
444 3ip3_A Oxidoreductase, putativ 30.1 78 0.0027 28.4 5.9 45 169-216 79-127 (337)
445 3ezy_A Dehydrogenase; structur 30.0 84 0.0029 28.3 6.1 45 169-216 76-122 (344)
446 2p2s_A Putative oxidoreductase 30.0 73 0.0025 28.5 5.7 45 169-216 78-124 (336)
447 1ub3_A Aldolase protein; schif 29.9 30 0.001 30.0 2.9 26 53-78 131-157 (220)
448 4gmf_A Yersiniabactin biosynth 29.8 85 0.0029 29.2 6.2 77 169-251 82-160 (372)
449 3mwd_B ATP-citrate synthase; A 29.8 2.4E+02 0.0081 25.9 9.1 85 185-275 171-258 (334)
450 3e18_A Oxidoreductase; dehydro 29.7 83 0.0028 28.7 6.1 45 169-216 77-123 (359)
451 3f4l_A Putative oxidoreductase 29.6 72 0.0025 28.8 5.6 45 169-216 77-123 (345)
452 1q7e_A Hypothetical protein YF 29.5 92 0.0032 29.7 6.4 41 49-94 74-114 (428)
453 2wlt_A L-asparaginase; hydrola 29.4 1.1E+02 0.0037 28.1 6.7 49 172-222 233-284 (332)
454 1dbt_A Orotidine 5'-phosphate 29.3 1.7E+02 0.0058 25.1 7.7 87 182-278 29-124 (239)
455 1muw_A Xylose isomerase; atomi 29.3 1.6E+02 0.0056 26.9 8.1 70 165-237 156-234 (386)
456 3pao_A Adenosine deaminase; st 29.2 3.2E+02 0.011 24.7 10.8 84 180-277 163-247 (326)
457 3gr4_A Pyruvate kinase isozyme 29.2 2.3E+02 0.0077 28.1 9.3 74 134-216 216-290 (550)
458 3ohs_X Trans-1,2-dihydrobenzen 29.2 89 0.003 28.0 6.1 45 169-216 78-124 (334)
459 4gxw_A Adenosine deaminase; am 29.2 3.5E+02 0.012 25.1 12.9 213 11-277 21-268 (380)
460 2ffc_A Orotidine 5-monophospha 29.2 85 0.0029 29.3 6.0 88 167-262 115-210 (353)
461 3m2t_A Probable dehydrogenase; 29.1 83 0.0028 28.7 5.9 45 169-216 80-126 (359)
462 2d1z_A Endo-1,4-beta-D-xylanas 29.0 49 0.0017 31.3 4.4 65 169-239 184-256 (436)
463 1wbh_A KHG/KDPG aldolase; lyas 29.0 2.6E+02 0.009 23.6 10.7 83 172-279 79-165 (214)
464 3nvt_A 3-deoxy-D-arabino-heptu 29.0 3.6E+02 0.012 25.2 13.6 43 172-216 160-213 (385)
465 1vlv_A Otcase, ornithine carba 28.8 2.8E+02 0.0094 25.4 9.3 75 191-278 68-142 (325)
466 1yx1_A Hypothetical protein PA 28.7 2.3E+02 0.0078 24.0 8.5 64 170-238 114-182 (264)
467 2a4a_A Deoxyribose-phosphate a 28.7 21 0.0007 32.4 1.6 30 49-78 166-196 (281)
468 3r7f_A Aspartate carbamoyltran 28.7 2.1E+02 0.0071 26.0 8.4 76 191-278 46-121 (304)
469 1vfs_A Alanine racemase; TIM-b 28.7 1.1E+02 0.0037 28.3 6.7 60 188-250 102-167 (386)
470 2egz_A 3-dehydroquinate dehydr 28.7 2.7E+02 0.0092 23.6 12.4 99 170-277 73-173 (219)
471 2yxb_A Coenzyme B12-dependent 28.5 85 0.0029 25.4 5.3 19 177-195 42-60 (161)
472 1sfl_A 3-dehydroquinate dehydr 28.3 2.8E+02 0.0097 23.8 12.1 102 173-276 22-134 (238)
473 3i65_A Dihydroorotate dehydrog 28.3 2.8E+02 0.0096 26.3 9.6 104 166-278 197-353 (415)
474 2zad_A Muconate cycloisomerase 28.2 3E+02 0.01 24.7 9.6 93 171-273 144-240 (345)
475 4e7p_A Response regulator; DNA 28.2 1.9E+02 0.0064 21.7 10.0 75 177-263 62-137 (150)
476 2ho3_A Oxidoreductase, GFO/IDH 28.1 96 0.0033 27.6 6.1 44 170-216 75-120 (325)
477 1rvk_A Isomerase/lactonizing e 27.9 2.9E+02 0.0099 25.2 9.6 93 171-273 154-256 (382)
478 3rc1_A Sugar 3-ketoreductase; 27.8 80 0.0027 28.6 5.6 45 169-216 101-147 (350)
479 3i65_A Dihydroorotate dehydrog 27.8 2E+02 0.0069 27.3 8.4 65 231-312 202-298 (415)
480 1pvv_A Otcase, ornithine carba 27.8 2.7E+02 0.0092 25.3 9.1 72 191-272 56-127 (315)
481 2xz9_A Phosphoenolpyruvate-pro 27.7 1.3E+02 0.0044 27.5 6.9 38 167-204 118-161 (324)
482 1sgj_A Citrate lyase, beta sub 27.7 59 0.002 28.9 4.5 46 170-216 83-128 (284)
483 3c1a_A Putative oxidoreductase 27.6 1E+02 0.0035 27.3 6.1 44 170-216 82-127 (315)
484 2ef0_A Ornithine carbamoyltran 27.6 3.4E+02 0.012 24.4 9.8 75 191-278 55-129 (301)
485 4g81_D Putative hexonate dehyd 27.6 2.4E+02 0.0081 24.6 8.5 33 173-207 25-57 (255)
486 1ydw_A AX110P-like protein; st 27.5 74 0.0025 28.9 5.3 46 169-217 83-130 (362)
487 1bxb_A Xylose isomerase; xylos 27.5 2.6E+02 0.0089 25.6 9.2 71 162-238 153-235 (387)
488 1zh8_A Oxidoreductase; TM0312, 27.4 88 0.003 28.2 5.7 45 169-216 94-140 (340)
489 1h1y_A D-ribulose-5-phosphate 27.4 91 0.0031 26.5 5.5 49 171-220 22-75 (228)
490 3tpf_A Otcase, ornithine carba 27.3 2.7E+02 0.0091 25.3 8.9 72 191-272 46-117 (307)
491 2agk_A 1-(5-phosphoribosyl)-5- 27.3 1.1E+02 0.0037 26.9 6.1 95 174-275 90-212 (260)
492 2jfn_A Glutamate racemase; cel 27.3 1.2E+02 0.0041 26.9 6.5 33 156-189 59-92 (285)
493 3p3b_A Mandelate racemase/muco 27.2 3.7E+02 0.013 24.7 11.4 99 164-273 146-261 (392)
494 2gl5_A Putative dehydratase pr 27.1 3.7E+02 0.013 24.7 10.3 99 161-273 149-274 (410)
495 1v5x_A PRA isomerase, phosphor 27.0 2.3E+02 0.008 23.8 8.0 65 173-250 13-83 (203)
496 2gt1_A Lipopolysaccharide hept 27.0 3.1E+02 0.011 23.8 11.0 116 168-308 197-321 (326)
497 3rys_A Adenosine deaminase 1; 26.9 3.6E+02 0.012 24.5 13.4 172 49-276 71-249 (343)
498 3fhl_A Putative oxidoreductase 26.8 1E+02 0.0034 28.0 6.1 45 169-216 77-123 (362)
499 2j66_A BTRK, decarboxylase; bu 26.7 3.8E+02 0.013 24.7 11.8 70 179-251 105-187 (428)
500 2og9_A Mandelate racemase/muco 26.7 3E+02 0.01 25.3 9.5 93 171-273 167-263 (393)
No 1
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=100.00 E-value=1.5e-62 Score=477.60 Aligned_cols=267 Identities=20% Similarity=0.261 Sum_probs=228.1
Q ss_pred cchHHHHHhhccCCeEEEecchHHHHHHCCCCCCCccccccccCCChHHHHHHHHHHHHhhccccccccccccHHHHHhC
Q 021144 8 TTSFMTDFLQKCGGYSVVDGGFATELERHGADLNDPLWSAKCLVSSPHLVRKVHLDYLDAGANIIITASYQATIQGFEAK 87 (317)
Q Consensus 8 ~~~~l~~~l~~~~~~lilDGgmgT~L~~~G~~~~~~lws~~~ll~~Pe~V~~iH~~Yl~AGAdiI~TnTy~as~~~l~~~ 87 (317)
|++.|.+.|++ ++++||||||||+|+++|++.. ++|++++++++||+|++||++|++||||||+|||||+|+.+|.++
T Consensus 9 ~~~~l~~~L~~-~~ilIlDGgmGT~L~~~G~~~~-~~ws~~l~l~~Pe~V~~iH~~Yl~AGAdII~TNTf~A~~~~l~~~ 86 (406)
T 1lt8_A 9 AKKGILERLNA-GEIVIGDGGFVFALEKRGYVKA-GPWTPEAAVEHPEAVRQLHREFLRAGSNVMQTFTFYASEDKLENR 86 (406)
T ss_dssp --CCHHHHHHT-TCCEECCCCHHHHHHHHTSSCT-TTCCCTHHHHCHHHHHHHHHHHHHTTCSEEECSCTTCSSCC----
T ss_pred chHHHHHHHhc-CCEEEEeCccchHHHHCCCCCC-cccchHhhccCHHHHHHHHHHHHHhCccceeccccccCHHHHHhc
Confidence 45668999982 3499999999999999998753 589999999999999999999999999999999999999999999
Q ss_pred CCCH---HHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCCCeEEEEeeCCCcCccCCCCCCCCCCCCCCCHH
Q 021144 88 GFST---EEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLE 164 (317)
Q Consensus 88 g~~~---~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~~~~~~~~~~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~ 164 (317)
|++. +++++||++||+|||+|+++ .+++|||||||+|+++. .++++
T Consensus 87 G~~~~~~~~~~eln~~Av~LAreAa~~--------------------~~~~VAGsIGP~g~~l~-----------~~s~e 135 (406)
T 1lt8_A 87 GNYVLEKISGQEVNEAAADIARQVADE--------------------GDALVAGGVSQTPSYLS-----------AKSET 135 (406)
T ss_dssp ---------CHHHHHHHHHHHHHHHTT--------------------TTCEEEEEECCCHHHHT-----------TCHHH
T ss_pred CCccchhHHHHHHHHHHHHHHHHHHhc--------------------CCCEEEEEcCCcccccC-----------CCCHH
Confidence 9752 45789999999999999842 25899999999998652 27999
Q ss_pred HHHHHHHHHHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCce
Q 021144 165 TLKEFHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVV 244 (317)
Q Consensus 165 el~~~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~ 244 (317)
+++++|++|++.|+++|||+|+|||||++.|++++++++++.+ +|||+||+|.++++ ++|+++++++..+.. .+++
T Consensus 136 el~~~~~eqi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~~~--lPv~iS~T~~~~G~-l~G~~~~~~~~~l~~-~~~~ 211 (406)
T 1lt8_A 136 EVKKVFLQQLEVFMKKNVDFLIAEYFEHVEEAVWAVETLIASG--KPVAATMAIGPEGD-LHGVPPGEAAVRLVK-AGAS 211 (406)
T ss_dssp HHHHHHHHHHHHHHHHTCSEEEECCCSCHHHHHHHHHHHGGGT--SCEEEEECCBTTBC-TTCCCHHHHHHHHHT-TTCS
T ss_pred HHHHHHHHHHHHHhhCCCCEEEEcccCCHHHHHHHHHHHHHhC--CcEEEEEEECCCCC-cCCCcHHHHHHHhhc-CCCC
Confidence 9999999999999999999999999999999999999999865 99999999988888 899999999998876 4799
Q ss_pred EEEEcCC-ChhhhHHHHHHHHhhC-----CCcEEEEeCCCCccccccccccc----cCCCChh-----hHHHHHHHHHHc
Q 021144 245 AVGINCT-SPRFIHGLILSVRKVT-----SKPVIIYPNSGETYNAELKKWVV----SFSLHFF-----PLELILNPFASC 309 (317)
Q Consensus 245 aiGvNC~-~p~~~~~~l~~l~~~~-----~~pl~vyPNaG~~~d~~~~~w~~----~~~~~~~-----~~~~~~~~w~~~ 309 (317)
+|||||+ +|+.|.++|+.+++.. +.||+||||+|..||..++.|.. +++.+|+ +|.+++++|.+.
T Consensus 212 avGvNC~~gP~~~~~~l~~l~~~~~~~g~~~pl~vyPNag~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~w~~~ 291 (406)
T 1lt8_A 212 IIGVNCHFDPTISLKTVKLMKEGLEAAQLKAHLMSQPLAYHTPDANKQGFIDLPEFPFGLEPRVATRWDIQKYAREAYNL 291 (406)
T ss_dssp EEEEESSSCHHHHHHHHHHHHHHHHTTTCCCEEEEECCSBCCTTCCTTCGGGSTTTTTSCGGGBCCHHHHHHHHHHHHHH
T ss_pred EEEecCCCCHHHHHHHHHHHHHhhhhcCCCccEEEecCCCCCCcCCcccccCCccccccCCHHHHHHHHHHHHHHHHHhC
Confidence 9999997 8999999999998764 78999999999988877778864 2345565 599999999988
Q ss_pred cc
Q 021144 310 RL 311 (317)
Q Consensus 310 ~~ 311 (317)
|+
T Consensus 292 Ga 293 (406)
T 1lt8_A 292 GV 293 (406)
T ss_dssp TE
T ss_pred CC
Confidence 74
No 2
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=100.00 E-value=1.2e-61 Score=490.02 Aligned_cols=263 Identities=24% Similarity=0.374 Sum_probs=239.1
Q ss_pred chHHHHHhhccCCeEEEecchHHHHHHCCCCCCCccccccccCCChHHHHHHHHHHHHhhccccccccccccHHHHHhCC
Q 021144 9 TSFMTDFLQKCGGYSVVDGGFATELERHGADLNDPLWSAKCLVSSPHLVRKVHLDYLDAGANIIITASYQATIQGFEAKG 88 (317)
Q Consensus 9 ~~~l~~~l~~~~~~lilDGgmgT~L~~~G~~~~~~lws~~~ll~~Pe~V~~iH~~Yl~AGAdiI~TnTy~as~~~l~~~g 88 (317)
+..|.++|+ ++++||||||||+|+++|++..+++|+ +++||+|+++|++|++||||||+|||||+|+.+|.++|
T Consensus 4 ~~~l~~~l~--~~ililDGamGT~L~~~g~~~~~el~~----l~~Pe~V~~iH~~Yl~AGAdii~TnTf~a~~~~l~~~g 77 (566)
T 1q7z_A 4 RREVSKLLS--ERVLLLDGAYGTEFMKYGYDDLPEELN----IKAPDVVLKVHRSYIESGSDVILTNTFGATRMKLRKHG 77 (566)
T ss_dssp HHHHHHHHH--HCCEECCCCSHHHHHHTTCCSCGGGHH----HHCHHHHHHHHHHHHHHTCSEEECSCTTCSHHHHGGGT
T ss_pred hhHHHHHHc--CCeEEEEChHHHHHHHCCCCCCchhhc----ccCHHHHHHHHHHHHHhhcceeecCcccCCHHHHHhcC
Confidence 456888887 689999999999999999987788997 99999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCCCeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHH
Q 021144 89 FSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKE 168 (317)
Q Consensus 89 ~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~~~~~~~~~~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~ 168 (317)
++ +++++||++||+|||+|++ . + +|||||||||+++. +|++ ++++++++
T Consensus 78 ~~-~~~~el~~~av~lAr~a~~--------------------~-~-~VAGsiGP~g~~~~-------~~~~-~~~~e~~~ 126 (566)
T 1q7z_A 78 LE-DKLDPIVRNAVRIARRAAG--------------------E-K-LVFGDIGPTGELPY-------PLGS-TLFEEFYE 126 (566)
T ss_dssp CG-GGHHHHHHHHHHHHHHHHT--------------------T-S-EEEEEECCCSCCBT-------TTSS-BCHHHHHH
T ss_pred ch-HHHHHHHHHHHHHHHHHHh--------------------C-C-eEEEeCCCcccCCC-------CCCC-CCHHHHHH
Confidence 97 6799999999999999983 1 4 99999999999762 3544 89999999
Q ss_pred HHHHHHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEE
Q 021144 169 FHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGI 248 (317)
Q Consensus 169 ~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGv 248 (317)
+|++|++.|+++|||+|++||||++.|++++++++++...++|+|+||||++++++++|+++++++..+.. .++++||+
T Consensus 127 ~~~~qi~~l~~~gvD~l~~ET~~~~~Ea~aa~~a~~~~~~~~Pv~vS~t~~~~g~~~~G~~~~~~~~~l~~-~~~~avG~ 205 (566)
T 1q7z_A 127 NFRETVEIMVEEGVDGIIFETFSDILELKAAVLAAREVSRDVFLIAHMTFDEKGRSLTGTDPANFAITFDE-LDIDALGI 205 (566)
T ss_dssp HHHHHHHHHHHTTCSEEEEEEECCHHHHHHHHHHHHHHCSSSCEEEEECCCTTSCCTTSCCHHHHHHHHHT-SSCSEEEE
T ss_pred HHHHHHHHHHhCCCCEEEEeccCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCeeCCCCcHHHHHHHhhc-cCCCEEEE
Confidence 99999999999999999999999999999999999985346999999999999999999999999999986 58999999
Q ss_pred cCC-ChhhhHHHHHHHHhhCCCcEEEEeCCCCcc--ccccccccccCCCChhhHHHHHHHHHHccccccc
Q 021144 249 NCT-SPRFIHGLILSVRKVTSKPVIIYPNSGETY--NAELKKWVVSFSLHFFPLELILNPFASCRLISFF 315 (317)
Q Consensus 249 NC~-~p~~~~~~l~~l~~~~~~pl~vyPNaG~~~--d~~~~~w~~~~~~~~~~~~~~~~~w~~~~~~~~~ 315 (317)
||+ +|++|.++|+.+++.+++|+++|||+|++| |+.+ .| +.+|++|++++++|++.| ++++
T Consensus 206 NC~~gp~~~~~~l~~l~~~~~~p~~vyPNaG~p~~~~~~~-~~----~~~p~~~a~~~~~~~~~G-~~ii 269 (566)
T 1q7z_A 206 NCSLGPEEILPIFQELSQYTDKFLVVEPNAGKPIVENGKT-VY----PLKPHDFAVHIDSYYELG-VNIF 269 (566)
T ss_dssp ESSSCHHHHHHHHHHHHHTCCSEEEEECCSSSCEEETTEE-EC----CCCHHHHHTTHHHHHHTT-CSEE
T ss_pred eCCCCHHHHHHHHHHHHhcCCCEEEEEcCCCCCcccCCcc-cc----CCCHHHHHHHHHHHHHcC-CcEE
Confidence 996 899999999999999999999999999987 5432 35 368999999999999999 7776
No 3
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=96.12 E-value=0.23 Score=45.12 Aligned_cols=89 Identities=11% Similarity=0.185 Sum_probs=55.7
Q ss_pred HHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceE-EEEcCC-
Q 021144 174 VLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVA-VGINCT- 251 (317)
Q Consensus 174 i~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~a-iGvNC~- 251 (317)
++.+.++|||.+++=.+|. +|....++.+++.+ +..+.-+ ...++.+.....+....+... +.++++
T Consensus 116 ~~~~~~aGvdgvii~Dlp~-ee~~~~~~~~~~~g--l~~i~li--------aP~t~~eri~~i~~~~~gfvY~vS~~GvT 184 (267)
T 3vnd_A 116 YTKAQAAGVDSVLIADVPV-EESAPFSKAAKAHG--IAPIFIA--------PPNADADTLKMVSEQGEGYTYLLSRAGVT 184 (267)
T ss_dssp HHHHHHHTCCEEEETTSCG-GGCHHHHHHHHHTT--CEEECEE--------CTTCCHHHHHHHHHHCCSCEEESCCCCCC
T ss_pred HHHHHHcCCCEEEeCCCCH-hhHHHHHHHHHHcC--CeEEEEE--------CCCCCHHHHHHHHHhCCCcEEEEecCCCC
Confidence 5567779999999988874 67888888888876 4433222 123344444444443333333 345662
Q ss_pred C-----hhhhHHHHHHHHhhCCCcEEE
Q 021144 252 S-----PRFIHGLILSVRKVTSKPVII 273 (317)
Q Consensus 252 ~-----p~~~~~~l~~l~~~~~~pl~v 273 (317)
+ +..+..+++.+++.++.|+++
T Consensus 185 G~~~~~~~~~~~~v~~vr~~~~~pv~v 211 (267)
T 3vnd_A 185 GTESKAGEPIENILTQLAEFNAPPPLL 211 (267)
T ss_dssp --------CHHHHHHHHHTTTCCCEEE
T ss_pred CCccCCcHHHHHHHHHHHHhcCCCEEE
Confidence 2 345678889999888889876
No 4
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=95.75 E-value=0.14 Score=47.63 Aligned_cols=104 Identities=21% Similarity=0.176 Sum_probs=71.2
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEe-------ccCCCHHHHHHHHHHHHHh-CCCccEEEEEEEcCCCcccCCCcHHH
Q 021144 161 VSLETLKEFHRRRVLILANSGADLIAF-------ETIPNKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILE 232 (317)
Q Consensus 161 ~s~~el~~~h~~qi~~l~~~gvD~l~~-------ET~p~~~Ea~a~~~~~~~~-~~~~pv~iSf~~~~~~~l~~G~~l~~ 232 (317)
++.+.++ ..++.+++.|||.|++ -|+ +.+|-+.+++.+.+. ..++||++.. .+.+..+
T Consensus 40 iD~~~l~----~li~~li~~Gv~Gl~v~GtTGE~~~L-s~~Er~~v~~~~v~~~~grvpViaGv---------g~~st~~ 105 (315)
T 3si9_A 40 IDEKAFC----NFVEWQITQGINGVSPVGTTGESPTL-THEEHKRIIELCVEQVAKRVPVVAGA---------GSNSTSE 105 (315)
T ss_dssp BCHHHHH----HHHHHHHHTTCSEEECSSTTTTGGGS-CHHHHHHHHHHHHHHHTTSSCBEEEC---------CCSSHHH
T ss_pred cCHHHHH----HHHHHHHHcCCCEEEeCccccCcccc-CHHHHHHHHHHHHHHhCCCCcEEEeC---------CCCCHHH
Confidence 6765544 4677788899999873 223 477877777776553 3468999876 2345666
Q ss_pred HHHHhhc--CCCceEEEEcC-----CChhhhHHHHHHHHhhCCCcEEEEeCCC
Q 021144 233 CASIADS--CEQVVAVGINC-----TSPRFIHGLILSVRKVTSKPVIIYPNSG 278 (317)
Q Consensus 233 a~~~~~~--~~~~~aiGvNC-----~~p~~~~~~l~~l~~~~~~pl~vyPNaG 278 (317)
+++..+. ..+++++.+-. .+.+.+....+.+.+.++.|+++|=+-+
T Consensus 106 ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~ 158 (315)
T 3si9_A 106 AVELAKHAEKAGADAVLVVTPYYNRPNQRGLYTHFSSIAKAISIPIIIYNIPS 158 (315)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHH
T ss_pred HHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHcCCCCEEEEeCch
Confidence 6655432 25788887755 2346677777888888899999997754
No 5
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=95.52 E-value=0.15 Score=47.14 Aligned_cols=104 Identities=17% Similarity=0.164 Sum_probs=70.4
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEe-----ccC-CCHHHHHHHHHHHHHh-CCCccEEEEEEEcCCCcccCCCcHHHH
Q 021144 161 VSLETLKEFHRRRVLILANSGADLIAF-----ETI-PNKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILEC 233 (317)
Q Consensus 161 ~s~~el~~~h~~qi~~l~~~gvD~l~~-----ET~-p~~~Ea~a~~~~~~~~-~~~~pv~iSf~~~~~~~l~~G~~l~~a 233 (317)
++.+.++ ..++.+++.|||.|++ |.. -+.+|-+.+++.+.+. ..++||++.. .+.+..++
T Consensus 26 iD~~~l~----~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---------g~~~t~~a 92 (309)
T 3fkr_A 26 LDLASQK----RAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTT---------SHYSTQVC 92 (309)
T ss_dssp BCHHHHH----HHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSSHHHH
T ss_pred cCHHHHH----HHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEec---------CCchHHHH
Confidence 6765544 4677788899998766 311 1577877788776553 3468999876 23455666
Q ss_pred HHHhhc--CCCceEEEEcC--------CChhhhHHHHHHHHhhCCCcEEEEeCC
Q 021144 234 ASIADS--CEQVVAVGINC--------TSPRFIHGLILSVRKVTSKPVIIYPNS 277 (317)
Q Consensus 234 ~~~~~~--~~~~~aiGvNC--------~~p~~~~~~l~~l~~~~~~pl~vyPNa 277 (317)
++..+. ..+++++.+-. .+.+.+....+.+.+.++.|+++|=+-
T Consensus 93 i~la~~A~~~Gadavlv~~Pyy~~~~~~s~~~l~~~f~~va~a~~lPiilYn~P 146 (309)
T 3fkr_A 93 AARSLRAQQLGAAMVMAMPPYHGATFRVPEAQIFEFYARVSDAIAIPIMVQDAP 146 (309)
T ss_dssp HHHHHHHHHTTCSEEEECCSCBTTTBCCCHHHHHHHHHHHHHHCSSCEEEEECG
T ss_pred HHHHHHHHHcCCCEEEEcCCCCccCCCCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 655432 25788888754 234667777788888889999999764
No 6
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=95.41 E-value=0.25 Score=45.45 Aligned_cols=105 Identities=13% Similarity=0.115 Sum_probs=71.7
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEec-cCC-----CHHHHHHHHHHHHHh-CC-CccEEEEEEEcCCCcccCCCcHHH
Q 021144 161 VSLETLKEFHRRRVLILANSGADLIAFE-TIP-----NKLEAKAYAELLEEE-GI-TIPAWFSFNSKDGINVVSGDSILE 232 (317)
Q Consensus 161 ~s~~el~~~h~~qi~~l~~~gvD~l~~E-T~p-----~~~Ea~a~~~~~~~~-~~-~~pv~iSf~~~~~~~l~~G~~l~~ 232 (317)
++.+.++ ..++.+++.|||.|++= |-. +.+|-+.+++.+.+. .. ++||++.. .+.+..+
T Consensus 25 iD~~~l~----~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGv---------g~~~t~~ 91 (301)
T 3m5v_A 25 VDEQSYA----RLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGA---------GSNATHE 91 (301)
T ss_dssp ECHHHHH----HHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEEC---------CCSSHHH
T ss_pred CCHHHHH----HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeC---------CCCCHHH
Confidence 6665544 46777888999998762 221 577877888776654 43 58999866 2345666
Q ss_pred HHHHhhc--CCCceEEEEcCC-----ChhhhHHHHHHHHhhCCCcEEEEeCCC
Q 021144 233 CASIADS--CEQVVAVGINCT-----SPRFIHGLILSVRKVTSKPVIIYPNSG 278 (317)
Q Consensus 233 a~~~~~~--~~~~~aiGvNC~-----~p~~~~~~l~~l~~~~~~pl~vyPNaG 278 (317)
+++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|=+-+
T Consensus 92 ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~ 144 (301)
T 3m5v_A 92 AVGLAKFAKEHGADGILSVAPYYNKPTQQGLYEHYKAIAQSVDIPVLLYNVPG 144 (301)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHH
T ss_pred HHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCch
Confidence 6665532 257888888662 235677777888888899999997654
No 7
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=95.40 E-value=0.15 Score=46.70 Aligned_cols=105 Identities=16% Similarity=0.129 Sum_probs=72.2
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEe-----cc-CCCHHHHHHHHHHHHHh-CCCccEEEEEEEcCCCcccCCCcHHHH
Q 021144 161 VSLETLKEFHRRRVLILANSGADLIAF-----ET-IPNKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILEC 233 (317)
Q Consensus 161 ~s~~el~~~h~~qi~~l~~~gvD~l~~-----ET-~p~~~Ea~a~~~~~~~~-~~~~pv~iSf~~~~~~~l~~G~~l~~a 233 (317)
++.+.+ +..++.+++.|||.|++ |. .-+.+|-+.+++.+.+. ..+.||++.. .+.+..++
T Consensus 18 iD~~~l----~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv---------g~~~t~~a 84 (292)
T 2vc6_A 18 IDEVAL----HDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGA---------GSNSTAEA 84 (292)
T ss_dssp ECHHHH----HHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEEC---------CCSSHHHH
T ss_pred cCHHHH----HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec---------CCccHHHH
Confidence 566554 44677788899999875 32 23577877888776653 3368999776 23455666
Q ss_pred HHHhhc--CCCceEEEEcCC-----ChhhhHHHHHHHHhhCCCcEEEEeCCC
Q 021144 234 ASIADS--CEQVVAVGINCT-----SPRFIHGLILSVRKVTSKPVIIYPNSG 278 (317)
Q Consensus 234 ~~~~~~--~~~~~aiGvNC~-----~p~~~~~~l~~l~~~~~~pl~vyPNaG 278 (317)
++..+. ..+++++.+..- +.+.+....+.+.+.++.|+++|=+-+
T Consensus 85 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~ 136 (292)
T 2vc6_A 85 IAFVRHAQNAGADGVLIVSPYYNKPTQEGIYQHFKAIDAASTIPIIVYNIPG 136 (292)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHH
T ss_pred HHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCcc
Confidence 655432 258899888773 236667777788888899999998754
No 8
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=95.32 E-value=0.2 Score=46.18 Aligned_cols=105 Identities=16% Similarity=0.166 Sum_probs=71.8
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEe-----cc-CCCHHHHHHHHHHHHHh-CCCccEEEEEEEcCCCcccCCCcHHHH
Q 021144 161 VSLETLKEFHRRRVLILANSGADLIAF-----ET-IPNKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILEC 233 (317)
Q Consensus 161 ~s~~el~~~h~~qi~~l~~~gvD~l~~-----ET-~p~~~Ea~a~~~~~~~~-~~~~pv~iSf~~~~~~~l~~G~~l~~a 233 (317)
++.+.++ ..++.+++.|||.|++ |. .-+.+|-+.+++.+.+. ..++||++.. .+.+..++
T Consensus 30 iD~~~l~----~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGv---------g~~~t~~a 96 (301)
T 1xky_A 30 IDFAKTT----KLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGT---------GSNNTHAS 96 (301)
T ss_dssp BCHHHHH----HHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSCHHHH
T ss_pred cCHHHHH----HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCC---------CCCCHHHH
Confidence 6765544 4677788899999875 32 23577877777776553 3368999776 23456666
Q ss_pred HHHhhc--CCCceEEEEcCC-----ChhhhHHHHHHHHhhCCCcEEEEeCCC
Q 021144 234 ASIADS--CEQVVAVGINCT-----SPRFIHGLILSVRKVTSKPVIIYPNSG 278 (317)
Q Consensus 234 ~~~~~~--~~~~~aiGvNC~-----~p~~~~~~l~~l~~~~~~pl~vyPNaG 278 (317)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|=+-+
T Consensus 97 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~ 148 (301)
T 1xky_A 97 IDLTKKATEVGVDAVMLVAPYYNKPSQEGMYQHFKAIAESTPLPVMLYNVPG 148 (301)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHTCSSCEEEEECHH
T ss_pred HHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCcc
Confidence 655432 258888888652 346667777788888899999998754
No 9
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=95.30 E-value=0.65 Score=42.20 Aligned_cols=89 Identities=15% Similarity=0.225 Sum_probs=53.4
Q ss_pred HHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEE-------
Q 021144 174 VLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAV------- 246 (317)
Q Consensus 174 i~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~ai------- 246 (317)
++.+.++|||.+++=.+|- +|....++++++.+ +..+ .+. . .-++.+.+.+......+...+
T Consensus 118 ~~~~~~aGvdGvIipDlp~-ee~~~~~~~~~~~g--l~~I-~lv-a------p~t~~eri~~i~~~~~gfiY~vs~~GvT 186 (271)
T 3nav_A 118 YQRCQKAGVDSVLIADVPT-NESQPFVAAAEKFG--IQPI-FIA-P------PTASDETLRAVAQLGKGYTYLLSRAGVT 186 (271)
T ss_dssp HHHHHHHTCCEEEETTSCG-GGCHHHHHHHHHTT--CEEE-EEE-C------TTCCHHHHHHHHHHCCSCEEECCCC---
T ss_pred HHHHHHCCCCEEEECCCCH-HHHHHHHHHHHHcC--CeEE-EEE-C------CCCCHHHHHHHHHHCCCeEEEEeccCCC
Confidence 4557779999999988884 67888888888876 4432 221 1 222333333333333343332
Q ss_pred EEcCCChhhhHHHHHHHHhhCCCcEEE
Q 021144 247 GINCTSPRFIHGLILSVRKVTSKPVII 273 (317)
Q Consensus 247 GvNC~~p~~~~~~l~~l~~~~~~pl~v 273 (317)
|..-.-+..+..+++.+++.++.|++|
T Consensus 187 G~~~~~~~~~~~~v~~vr~~~~~Pv~v 213 (271)
T 3nav_A 187 GAETKANMPVHALLERLQQFDAPPALL 213 (271)
T ss_dssp -----CCHHHHHHHHHHHHTTCCCEEE
T ss_pred CcccCCchhHHHHHHHHHHhcCCCEEE
Confidence 211112456778899999988899877
No 10
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=95.26 E-value=0.2 Score=46.20 Aligned_cols=105 Identities=13% Similarity=0.171 Sum_probs=72.0
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEe-----ccC-CCHHHHHHHHHHHHHh-CCCccEEEEEEEcCCCcccCCCcHHHH
Q 021144 161 VSLETLKEFHRRRVLILANSGADLIAF-----ETI-PNKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILEC 233 (317)
Q Consensus 161 ~s~~el~~~h~~qi~~l~~~gvD~l~~-----ET~-p~~~Ea~a~~~~~~~~-~~~~pv~iSf~~~~~~~l~~G~~l~~a 233 (317)
++.+.++ ..++.+++.|||.|++ |.. -+.+|-+.+++.+.+. ...+||++.. .+.+..++
T Consensus 34 iD~~~l~----~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---------g~~st~~a 100 (304)
T 3cpr_A 34 IDIAAGR----EVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGV---------GTNNTRTS 100 (304)
T ss_dssp BCHHHHH----HHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEEC---------CCSCHHHH
T ss_pred cCHHHHH----HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecC---------CCCCHHHH
Confidence 6765544 4677888899999875 432 3577877777776653 3368999766 34466677
Q ss_pred HHHhhc--CCCceEEEEcCC-----ChhhhHHHHHHHHhhCCCcEEEEeCCC
Q 021144 234 ASIADS--CEQVVAVGINCT-----SPRFIHGLILSVRKVTSKPVIIYPNSG 278 (317)
Q Consensus 234 ~~~~~~--~~~~~aiGvNC~-----~p~~~~~~l~~l~~~~~~pl~vyPNaG 278 (317)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|=+-+
T Consensus 101 i~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~ 152 (304)
T 3cpr_A 101 VELAEAAASAGADGLLVVTPYYSKPSQEGLLAHFGAIAAATEVPICLYDIPG 152 (304)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHH
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCcc
Confidence 655532 258888877552 246667777788888899999998754
No 11
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=95.20 E-value=0.23 Score=45.50 Aligned_cols=105 Identities=18% Similarity=0.134 Sum_probs=72.3
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEe-----ccC-CCHHHHHHHHHHHHHh-CCCccEEEEEEEcCCCcccCCCcHHHH
Q 021144 161 VSLETLKEFHRRRVLILANSGADLIAF-----ETI-PNKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILEC 233 (317)
Q Consensus 161 ~s~~el~~~h~~qi~~l~~~gvD~l~~-----ET~-p~~~Ea~a~~~~~~~~-~~~~pv~iSf~~~~~~~l~~G~~l~~a 233 (317)
++.+.++ ..++.+++.|||.|++ |.. -+.+|-+.+++.+.+. ..++||++.. .+.+..++
T Consensus 19 iD~~~l~----~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv---------g~~~t~~a 85 (292)
T 2ojp_A 19 VCRASLK----KLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGT---------GANATAEA 85 (292)
T ss_dssp BCHHHHH----HHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSSHHHH
T ss_pred cCHHHHH----HHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEec---------CCccHHHH
Confidence 6765544 4677788899999876 432 3577877888776553 3368999776 34466777
Q ss_pred HHHhhc--CCCceEEEEcCC-----ChhhhHHHHHHHHhhCCCcEEEEeCCC
Q 021144 234 ASIADS--CEQVVAVGINCT-----SPRFIHGLILSVRKVTSKPVIIYPNSG 278 (317)
Q Consensus 234 ~~~~~~--~~~~~aiGvNC~-----~p~~~~~~l~~l~~~~~~pl~vyPNaG 278 (317)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|=+-+
T Consensus 86 i~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~ 137 (292)
T 2ojp_A 86 ISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIAEHTDLPQILYNVPS 137 (292)
T ss_dssp HHHHHHTTTSSCSEEEEECCCSSCCCHHHHHHHHHHHHTTCSSCEEEECCHH
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCcc
Confidence 766542 357888887652 236677777788888899999998743
No 12
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=95.17 E-value=0.23 Score=45.50 Aligned_cols=105 Identities=17% Similarity=0.154 Sum_probs=71.6
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEe-----cc-CCCHHHHHHHHHHHHHh-CCCccEEEEEEEcCCCcccCCCcHHHH
Q 021144 161 VSLETLKEFHRRRVLILANSGADLIAF-----ET-IPNKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILEC 233 (317)
Q Consensus 161 ~s~~el~~~h~~qi~~l~~~gvD~l~~-----ET-~p~~~Ea~a~~~~~~~~-~~~~pv~iSf~~~~~~~l~~G~~l~~a 233 (317)
++.+.+ +..++.+++.|||.|++ |. .-+.+|-+.+++.+.+. ..+.||++.. .+.+..++
T Consensus 18 iD~~~l----~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---------g~~~t~~a 84 (294)
T 2ehh_A 18 VDYEAL----GNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGT---------GGNATHEA 84 (294)
T ss_dssp ECHHHH----HHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEC---------CCSCHHHH
T ss_pred cCHHHH----HHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec---------CCCCHHHH
Confidence 665544 44677888899999875 32 23577877777776653 3368999766 23456666
Q ss_pred HHHhhc--CCCceEEEEcCC-----ChhhhHHHHHHHHhhCCCcEEEEeCCC
Q 021144 234 ASIADS--CEQVVAVGINCT-----SPRFIHGLILSVRKVTSKPVIIYPNSG 278 (317)
Q Consensus 234 ~~~~~~--~~~~~aiGvNC~-----~p~~~~~~l~~l~~~~~~pl~vyPNaG 278 (317)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|=+-+
T Consensus 85 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~ 136 (294)
T 2ehh_A 85 VHLTAHAKEVGADGALVVVPYYNKPTQRGLYEHFKTVAQEVDIPIIIYNIPS 136 (294)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHH
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCc
Confidence 655432 258888887652 235667777788888899999998754
No 13
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=94.97 E-value=0.22 Score=45.45 Aligned_cols=105 Identities=14% Similarity=0.087 Sum_probs=70.9
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEe-----ccC-CCHHHHHHHHHHHHHh-CCCccEEEEEEEcCCCcccCCCcHHHH
Q 021144 161 VSLETLKEFHRRRVLILANSGADLIAF-----ETI-PNKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILEC 233 (317)
Q Consensus 161 ~s~~el~~~h~~qi~~l~~~gvD~l~~-----ET~-p~~~Ea~a~~~~~~~~-~~~~pv~iSf~~~~~~~l~~G~~l~~a 233 (317)
++.+.+ +..++.+++.|||.|++ |.. -+.+|-+.+++.+.+. ..+.||++.. .+.+..++
T Consensus 18 iD~~~l----~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv---------g~~~t~~a 84 (289)
T 2yxg_A 18 VDFDGL----EENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGA---------GSNCTEEA 84 (289)
T ss_dssp ECHHHH----HHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEC---------CCSSHHHH
T ss_pred cCHHHH----HHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC---------CCCCHHHH
Confidence 666554 44677788899999865 322 2577877777776553 3368999776 23455666
Q ss_pred HHHhhc--CCCceEEEEcCC-----ChhhhHHHHHHHHhhCCCcEEEEeCCC
Q 021144 234 ASIADS--CEQVVAVGINCT-----SPRFIHGLILSVRKVTSKPVIIYPNSG 278 (317)
Q Consensus 234 ~~~~~~--~~~~~aiGvNC~-----~p~~~~~~l~~l~~~~~~pl~vyPNaG 278 (317)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|=+-+
T Consensus 85 i~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~ 136 (289)
T 2yxg_A 85 IELSVFAEDVGADAVLSITPYYNKPTQEGLRKHFGKVAESINLPIVLYNVPS 136 (289)
T ss_dssp HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHH
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCcc
Confidence 655432 247888887652 236677777788888899999998754
No 14
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=94.91 E-value=0.24 Score=45.72 Aligned_cols=105 Identities=15% Similarity=0.121 Sum_probs=71.5
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEe-----cc-CCCHHHHHHHHHHHHHh-CCCccEEEEEEEcCCCcccCCCcHHHH
Q 021144 161 VSLETLKEFHRRRVLILANSGADLIAF-----ET-IPNKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILEC 233 (317)
Q Consensus 161 ~s~~el~~~h~~qi~~l~~~gvD~l~~-----ET-~p~~~Ea~a~~~~~~~~-~~~~pv~iSf~~~~~~~l~~G~~l~~a 233 (317)
++.+.++ ..++.+++.|||.|++ |. .-+.+|-+.+++.+.+. ..++||++.. .+.+..++
T Consensus 30 iD~~~l~----~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGv---------g~~st~~a 96 (306)
T 1o5k_A 30 LDLESYE----RLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGA---------GTNSTEKT 96 (306)
T ss_dssp ECHHHHH----HHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSCHHHH
T ss_pred cCHHHHH----HHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcC---------CCccHHHH
Confidence 6665544 4677788899999875 42 23577877888776653 3368999776 23456666
Q ss_pred HHHhhc--CCCceEEEEcCC-----ChhhhHHHHHHHHhhCCCcEEEEeCCC
Q 021144 234 ASIADS--CEQVVAVGINCT-----SPRFIHGLILSVRKVTSKPVIIYPNSG 278 (317)
Q Consensus 234 ~~~~~~--~~~~~aiGvNC~-----~p~~~~~~l~~l~~~~~~pl~vyPNaG 278 (317)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|=+-+
T Consensus 97 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~ 148 (306)
T 1o5k_A 97 LKLVKQAEKLGANGVLVVTPYYNKPTQEGLYQHYKYISERTDLGIVVYNVPG 148 (306)
T ss_dssp HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTTCSSCEEEEECHH
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCcc
Confidence 655432 247888887652 346667777788888899999998754
No 15
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=94.77 E-value=0.25 Score=46.13 Aligned_cols=105 Identities=14% Similarity=0.068 Sum_probs=71.5
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEe-----cc-CCCHHHHHHHHHHHHHh-CCCccEEEEEEEcCCCcccCCCcHHHH
Q 021144 161 VSLETLKEFHRRRVLILANSGADLIAF-----ET-IPNKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILEC 233 (317)
Q Consensus 161 ~s~~el~~~h~~qi~~l~~~gvD~l~~-----ET-~p~~~Ea~a~~~~~~~~-~~~~pv~iSf~~~~~~~l~~G~~l~~a 233 (317)
++.+.++ ..++.+++.|||.|++ |. .-+.+|-+.+++.+.+. ..++||++.. .+.+..++
T Consensus 52 iD~~~l~----~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGv---------g~~st~ea 118 (332)
T 2r8w_A 52 VDIEAFS----ALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGI---------GALRTDEA 118 (332)
T ss_dssp BCHHHHH----HHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEE---------CCSSHHHH
T ss_pred cCHHHHH----HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec---------CCCCHHHH
Confidence 6765544 4677788899999875 42 23577877888776653 3368999877 23455666
Q ss_pred HHHhhc--CCCceEEEEcCC-----ChhhhHHHHHHHHhhCCCcEEEEeCCC
Q 021144 234 ASIADS--CEQVVAVGINCT-----SPRFIHGLILSVRKVTSKPVIIYPNSG 278 (317)
Q Consensus 234 ~~~~~~--~~~~~aiGvNC~-----~p~~~~~~l~~l~~~~~~pl~vyPNaG 278 (317)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|=+-+
T Consensus 119 i~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~~lPiilYn~P~ 170 (332)
T 2r8w_A 119 VALAKDAEAAGADALLLAPVSYTPLTQEEAYHHFAAVAGATALPLAIYNNPT 170 (332)
T ss_dssp HHHHHHHHHHTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCSSCEEEECCHH
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCcc
Confidence 655432 247888888652 235667777788888899999997654
No 16
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=94.71 E-value=0.72 Score=42.72 Aligned_cols=105 Identities=19% Similarity=0.210 Sum_probs=70.6
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEe-----ccC-CCHHHHHHHHHHHHHh-CCCccEEEEEEEcCCCcccCCCcHHHH
Q 021144 161 VSLETLKEFHRRRVLILANSGADLIAF-----ETI-PNKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILEC 233 (317)
Q Consensus 161 ~s~~el~~~h~~qi~~l~~~gvD~l~~-----ET~-p~~~Ea~a~~~~~~~~-~~~~pv~iSf~~~~~~~l~~G~~l~~a 233 (317)
++.+.+ +..++.+++.|||.|++ |.. -+.+|-+.+++.+.+. ...+||++.. .+.+..++
T Consensus 29 iD~~~l----~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---------g~~~t~~a 95 (318)
T 3qfe_A 29 LDLASQ----ERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGV---------GAHSTRQV 95 (318)
T ss_dssp ECHHHH----HHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEEC---------CCSSHHHH
T ss_pred CCHHHH----HHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC---------CCCCHHHH
Confidence 666554 44678888899998764 321 2577877888776553 4468999866 23456666
Q ss_pred HHHhhc--CCCceEEEEcCC-------ChhhhHHHHHHHHhhCCCcEEEEeCCC
Q 021144 234 ASIADS--CEQVVAVGINCT-------SPRFIHGLILSVRKVTSKPVIIYPNSG 278 (317)
Q Consensus 234 ~~~~~~--~~~~~aiGvNC~-------~p~~~~~~l~~l~~~~~~pl~vyPNaG 278 (317)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|=+-+
T Consensus 96 i~la~~a~~~Gadavlv~~P~y~~kp~~~~~l~~~f~~ia~a~~lPiilYn~P~ 149 (318)
T 3qfe_A 96 LEHINDASVAGANYVLVLPPAYFGKATTPPVIKSFFDDVSCQSPLPVVIYNFPG 149 (318)
T ss_dssp HHHHHHHHHHTCSEEEECCCCC---CCCHHHHHHHHHHHHHHCSSCEEEEECCC
T ss_pred HHHHHHHHHcCCCEEEEeCCcccCCCCCHHHHHHHHHHHHhhCCCCEEEEeCCc
Confidence 665532 247888877553 124566667777778899999998765
No 17
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=94.67 E-value=0.33 Score=44.37 Aligned_cols=105 Identities=15% Similarity=0.119 Sum_probs=71.3
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEe-ccCC-----CHHHHHHHHHHHHHh-CCCccEEEEEEEcCCCcccCCCcHHHH
Q 021144 161 VSLETLKEFHRRRVLILANSGADLIAF-ETIP-----NKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILEC 233 (317)
Q Consensus 161 ~s~~el~~~h~~qi~~l~~~gvD~l~~-ET~p-----~~~Ea~a~~~~~~~~-~~~~pv~iSf~~~~~~~l~~G~~l~~a 233 (317)
++.+.++ ..++.+++.|||.|++ -|-. +.+|-+.+++.+.+. +...||++.. .+.+..++
T Consensus 19 iD~~~l~----~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv---------g~~~t~~a 85 (291)
T 3tak_A 19 VDWKSLE----KLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGT---------GANSTREA 85 (291)
T ss_dssp BCHHHHH----HHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSSHHHH
T ss_pred cCHHHHH----HHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeC---------CCCCHHHH
Confidence 6765544 4677788899998764 3433 578888888876653 3468999866 23456666
Q ss_pred HHHhhc--CCCceEEEEcCC-----ChhhhHHHHHHHHhhCCCcEEEEeCCC
Q 021144 234 ASIADS--CEQVVAVGINCT-----SPRFIHGLILSVRKVTSKPVIIYPNSG 278 (317)
Q Consensus 234 ~~~~~~--~~~~~aiGvNC~-----~p~~~~~~l~~l~~~~~~pl~vyPNaG 278 (317)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|=+-+
T Consensus 86 i~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~ 137 (291)
T 3tak_A 86 IELTKAAKDLGADAALLVTPYYNKPTQEGLYQHYKAIAEAVELPLILYNVPG 137 (291)
T ss_dssp HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHH
T ss_pred HHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeccc
Confidence 655432 247788777552 235677777888888899999997643
No 18
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=94.64 E-value=0.43 Score=43.74 Aligned_cols=105 Identities=19% Similarity=0.170 Sum_probs=71.2
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEe-ccCC-----CHHHHHHHHHHHHHh-CCCccEEEEEEEcCCCcccCCCcHHHH
Q 021144 161 VSLETLKEFHRRRVLILANSGADLIAF-ETIP-----NKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILEC 233 (317)
Q Consensus 161 ~s~~el~~~h~~qi~~l~~~gvD~l~~-ET~p-----~~~Ea~a~~~~~~~~-~~~~pv~iSf~~~~~~~l~~G~~l~~a 233 (317)
++.+.++ ..++.+++.|||.|++ -|-. +.+|-+.+++.+.+. ..++||++.. .+.+..++
T Consensus 25 iD~~~l~----~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---------g~~~t~~a 91 (297)
T 3flu_A 25 IHYEQLR----DLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGT---------GANNTVEA 91 (297)
T ss_dssp BCHHHHH----HHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSSHHHH
T ss_pred cCHHHHH----HHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeC---------CCcCHHHH
Confidence 6665544 4677788899998765 3322 578878888776553 3468999866 23456666
Q ss_pred HHHhhc--CCCceEEEEcCC-----ChhhhHHHHHHHHhhCCCcEEEEeCCC
Q 021144 234 ASIADS--CEQVVAVGINCT-----SPRFIHGLILSVRKVTSKPVIIYPNSG 278 (317)
Q Consensus 234 ~~~~~~--~~~~~aiGvNC~-----~p~~~~~~l~~l~~~~~~pl~vyPNaG 278 (317)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|=+-+
T Consensus 92 i~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~ 143 (297)
T 3flu_A 92 IALSQAAEKAGADYTLSVVPYYNKPSQEGIYQHFKTIAEATSIPMIIYNVPG 143 (297)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHH
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEECCc
Confidence 655432 257888877652 235667777888888899999997643
No 19
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=94.64 E-value=0.31 Score=44.88 Aligned_cols=105 Identities=16% Similarity=0.140 Sum_probs=71.4
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEe-ccCC-----CHHHHHHHHHHHHHh-CCCccEEEEEEEcCCCcccCCCcHHHH
Q 021144 161 VSLETLKEFHRRRVLILANSGADLIAF-ETIP-----NKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILEC 233 (317)
Q Consensus 161 ~s~~el~~~h~~qi~~l~~~gvD~l~~-ET~p-----~~~Ea~a~~~~~~~~-~~~~pv~iSf~~~~~~~l~~G~~l~~a 233 (317)
++.+.++ ..++.+++.|||.|++ -|-. +.+|-+.+++.+.+. ..++||++.. .+.+..++
T Consensus 33 iD~~~l~----~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGv---------g~~~t~~a 99 (304)
T 3l21_A 33 LDTATAA----RLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGA---------GTYDTAHS 99 (304)
T ss_dssp BCHHHHH----HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEEC---------CCSCHHHH
T ss_pred cCHHHHH----HHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeC---------CCCCHHHH
Confidence 6765544 4677888899998764 2222 578878888776653 3468999876 23455666
Q ss_pred HHHhhc--CCCceEEEEcCC-----ChhhhHHHHHHHHhhCCCcEEEEeCCC
Q 021144 234 ASIADS--CEQVVAVGINCT-----SPRFIHGLILSVRKVTSKPVIIYPNSG 278 (317)
Q Consensus 234 ~~~~~~--~~~~~aiGvNC~-----~p~~~~~~l~~l~~~~~~pl~vyPNaG 278 (317)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|=+-+
T Consensus 100 i~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~ 151 (304)
T 3l21_A 100 IRLAKACAAEGAHGLLVVTPYYSKPPQRGLQAHFTAVADATELPMLLYDIPG 151 (304)
T ss_dssp HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTSCSSCEEEEECHH
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCcc
Confidence 655432 247888887662 246677777888888899999997643
No 20
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=94.61 E-value=0.35 Score=44.80 Aligned_cols=105 Identities=20% Similarity=0.176 Sum_probs=72.2
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEe-----ccCC-CHHHHHHHHHHHHHh-CCCccEEEEEEEcCCCcccCCCcHHHH
Q 021144 161 VSLETLKEFHRRRVLILANSGADLIAF-----ETIP-NKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILEC 233 (317)
Q Consensus 161 ~s~~el~~~h~~qi~~l~~~gvD~l~~-----ET~p-~~~Ea~a~~~~~~~~-~~~~pv~iSf~~~~~~~l~~G~~l~~a 233 (317)
++.+.++ ..++.+++.|||.|++ |... +.+|-+.+++.+.+. ..++||++.. .+.+..++
T Consensus 42 iD~~~l~----~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGv---------g~~~t~~a 108 (315)
T 3na8_A 42 LDLPALG----RSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSV---------SDLTTAKT 108 (315)
T ss_dssp BCHHHHH----HHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEEC---------CCSSHHHH
T ss_pred cCHHHHH----HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec---------CCCCHHHH
Confidence 6765544 4677888899998864 3222 577878888776653 3468999876 23456666
Q ss_pred HHHhhc--CCCceEEEEcCC-----ChhhhHHHHHHHHhhCCCcEEEEeCCC
Q 021144 234 ASIADS--CEQVVAVGINCT-----SPRFIHGLILSVRKVTSKPVIIYPNSG 278 (317)
Q Consensus 234 ~~~~~~--~~~~~aiGvNC~-----~p~~~~~~l~~l~~~~~~pl~vyPNaG 278 (317)
++..+. ..+++++.+-+- +.+.+....+.+.+.++.|+++|=+-+
T Consensus 109 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~ 160 (315)
T 3na8_A 109 VRRAQFAESLGAEAVMVLPISYWKLNEAEVFQHYRAVGEAIGVPVMLYNNPG 160 (315)
T ss_dssp HHHHHHHHHTTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHH
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCcEEEEeCcc
Confidence 655432 258899888663 236677777888888899999998754
No 21
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=94.61 E-value=0.36 Score=44.74 Aligned_cols=105 Identities=14% Similarity=0.141 Sum_probs=70.9
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEe-----ccC-CCHHHHHHHHHHHHH-hCCCccEEEEEEEcCCCcccCCCcHHHH
Q 021144 161 VSLETLKEFHRRRVLILANSGADLIAF-----ETI-PNKLEAKAYAELLEE-EGITIPAWFSFNSKDGINVVSGDSILEC 233 (317)
Q Consensus 161 ~s~~el~~~h~~qi~~l~~~gvD~l~~-----ET~-p~~~Ea~a~~~~~~~-~~~~~pv~iSf~~~~~~~l~~G~~l~~a 233 (317)
++.+.+ +..++.+++.|||.|++ |.. -+.+|-+.+++.+.+ .+..+||++.. .+.+..++
T Consensus 41 iD~~~l----~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGv---------g~~st~ea 107 (314)
T 3qze_A 41 LDWDSL----AKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGT---------GANSTREA 107 (314)
T ss_dssp BCHHHH----HHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSSHHHH
T ss_pred cCHHHH----HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC---------CCcCHHHH
Confidence 666554 44677788899998766 311 257787788877655 33468999866 23456666
Q ss_pred HHHhhc--CCCceEEEEcCC-----ChhhhHHHHHHHHhhCCCcEEEEeCCC
Q 021144 234 ASIADS--CEQVVAVGINCT-----SPRFIHGLILSVRKVTSKPVIIYPNSG 278 (317)
Q Consensus 234 ~~~~~~--~~~~~aiGvNC~-----~p~~~~~~l~~l~~~~~~pl~vyPNaG 278 (317)
++.++. ..+++++.+-.- +.+.+....+.+.+.++.|+++|=+-+
T Consensus 108 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~ 159 (314)
T 3qze_A 108 VALTEAAKSGGADACLLVTPYYNKPTQEGMYQHFRHIAEAVAIPQILYNVPG 159 (314)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHSCSCEEEEECHH
T ss_pred HHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCcc
Confidence 655432 257888877652 235677777888888899999997743
No 22
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=94.61 E-value=0.31 Score=44.71 Aligned_cols=105 Identities=19% Similarity=0.113 Sum_probs=71.6
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEe-----cc-CCCHHHHHHHHHHHHHh-CCCccEEEEEEEcCCCcccCCCcHHHH
Q 021144 161 VSLETLKEFHRRRVLILANSGADLIAF-----ET-IPNKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILEC 233 (317)
Q Consensus 161 ~s~~el~~~h~~qi~~l~~~gvD~l~~-----ET-~p~~~Ea~a~~~~~~~~-~~~~pv~iSf~~~~~~~l~~G~~l~~a 233 (317)
++.+.+ +..++.+++.|||.|++ |. .-+.+|-+.+++.+.+. ..++||++.. .+.+..++
T Consensus 18 iD~~~l----~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---------g~~~t~~a 84 (297)
T 2rfg_A 18 VDEKAL----AGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGA---------GSNNPVEA 84 (297)
T ss_dssp ECHHHH----HHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEEC---------CCSSHHHH
T ss_pred cCHHHH----HHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcc---------CCCCHHHH
Confidence 566554 44677788899999875 32 23577877888776653 3368999776 23456666
Q ss_pred HHHhhc--CCCceEEEEcCC-----ChhhhHHHHHHHHhhCCCcEEEEeCCC
Q 021144 234 ASIADS--CEQVVAVGINCT-----SPRFIHGLILSVRKVTSKPVIIYPNSG 278 (317)
Q Consensus 234 ~~~~~~--~~~~~aiGvNC~-----~p~~~~~~l~~l~~~~~~pl~vyPNaG 278 (317)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|=+-+
T Consensus 85 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~ 136 (297)
T 2rfg_A 85 VRYAQHAQQAGADAVLCVAGYYNRPSQEGLYQHFKMVHDAIDIPIIVYNIPP 136 (297)
T ss_dssp HHHHHHHHHHTCSEEEECCCTTTCCCHHHHHHHHHHHHHHCSSCEEEEECHH
T ss_pred HHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCcc
Confidence 655432 247888888663 235667777788888899999998754
No 23
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=94.51 E-value=0.4 Score=44.34 Aligned_cols=108 Identities=18% Similarity=0.100 Sum_probs=72.9
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEe-----cc-CCCHHHHHHHHHHHHHh-CCCccEEEEEEEcCCCcccCCCcHHHH
Q 021144 161 VSLETLKEFHRRRVLILANSGADLIAF-----ET-IPNKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILEC 233 (317)
Q Consensus 161 ~s~~el~~~h~~qi~~l~~~gvD~l~~-----ET-~p~~~Ea~a~~~~~~~~-~~~~pv~iSf~~~~~~~l~~G~~l~~a 233 (317)
++.+.++ ..++.+++.|||.|++ |. .-+.+|-+.+++.+.+. ..++||++.. .+ +..++
T Consensus 30 iD~~~l~----~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGv---------g~-st~~a 95 (314)
T 3d0c_A 30 IDWKGLD----DNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGI---------GY-SVDTA 95 (314)
T ss_dssp BCHHHHH----HHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEE---------CS-SHHHH
T ss_pred CCHHHHH----HHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecC---------Cc-CHHHH
Confidence 6765544 4677788899999875 32 23577877777776553 3368999877 23 55666
Q ss_pred HHHhhc--CCCceEEEEcCC-----ChhhhHHHHHHHHhhCCCcEEEEeCCCCcccc
Q 021144 234 ASIADS--CEQVVAVGINCT-----SPRFIHGLILSVRKVTSKPVIIYPNSGETYNA 283 (317)
Q Consensus 234 ~~~~~~--~~~~~aiGvNC~-----~p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~ 283 (317)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|=..|. .++
T Consensus 96 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~tg~-l~~ 151 (314)
T 3d0c_A 96 IELGKSAIDSGADCVMIHQPVHPYITDAGAVEYYRNIIEALDAPSIIYFKDAH-LSD 151 (314)
T ss_dssp HHHHHHHHHTTCSEEEECCCCCSCCCHHHHHHHHHHHHHHSSSCEEEEECCTT-SCT
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCC-cCH
Confidence 655432 258888888663 2356677777888888999999985554 444
No 24
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=94.49 E-value=0.3 Score=44.64 Aligned_cols=105 Identities=11% Similarity=0.019 Sum_probs=70.9
Q ss_pred CCHHHHHHHHHHHHHHHHh-CCCCEEEe-----ccC-CCHHHHHHHHHHHHH-hCCCccEEEEEEEcCCCcccCCCcHHH
Q 021144 161 VSLETLKEFHRRRVLILAN-SGADLIAF-----ETI-PNKLEAKAYAELLEE-EGITIPAWFSFNSKDGINVVSGDSILE 232 (317)
Q Consensus 161 ~s~~el~~~h~~qi~~l~~-~gvD~l~~-----ET~-p~~~Ea~a~~~~~~~-~~~~~pv~iSf~~~~~~~l~~G~~l~~ 232 (317)
++.+.++ ..++.+++ .|||.|++ |.. -+.+|-+.+++.+.+ ...++||++.. .+.+..+
T Consensus 21 iD~~~l~----~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---------g~~~t~~ 87 (293)
T 1f6k_A 21 INEKGLR----QIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQV---------GSVNLKE 87 (293)
T ss_dssp BCHHHHH----HHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEC---------CCSCHHH
T ss_pred cCHHHHH----HHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEec---------CCCCHHH
Confidence 6765544 46778888 99999875 422 257777777777655 33368999776 2345666
Q ss_pred HHHHhhc--CCCceEEEEcCC-----ChhhhHHHHHHHHhhCCCcEEEEeCCC
Q 021144 233 CASIADS--CEQVVAVGINCT-----SPRFIHGLILSVRKVTSKPVIIYPNSG 278 (317)
Q Consensus 233 a~~~~~~--~~~~~aiGvNC~-----~p~~~~~~l~~l~~~~~~pl~vyPNaG 278 (317)
+++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|=+-+
T Consensus 88 ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~ 140 (293)
T 1f6k_A 88 AVELGKYATELGYDCLSAVTPFYYKFSFPEIKHYYDTIIAETGSNMIVYSIPF 140 (293)
T ss_dssp HHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHCCCEEEEECHH
T ss_pred HHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEECcc
Confidence 6655432 247888877652 235666677777777889999998754
No 25
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=94.46 E-value=0.29 Score=45.96 Aligned_cols=105 Identities=16% Similarity=0.147 Sum_probs=71.8
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEe-----ccC-CCHHHHHHHHHHHHHh-CCCccEEEEEEEcCCCcccCCCcHHHH
Q 021144 161 VSLETLKEFHRRRVLILANSGADLIAF-----ETI-PNKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILEC 233 (317)
Q Consensus 161 ~s~~el~~~h~~qi~~l~~~gvD~l~~-----ET~-p~~~Ea~a~~~~~~~~-~~~~pv~iSf~~~~~~~l~~G~~l~~a 233 (317)
++.+.++ ..++.+++.|||.|++ |.. -+.+|-+.+++.+.+. ...+||++.. .+.+..++
T Consensus 49 ID~~~l~----~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGv---------g~~st~ea 115 (343)
T 2v9d_A 49 LDKPGTA----ALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGT---------GGTNARET 115 (343)
T ss_dssp BCHHHHH----HHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---------CSSCHHHH
T ss_pred cCHHHHH----HHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec---------CCCCHHHH
Confidence 6765544 4677788899999875 422 2577877888776653 3368999776 23456666
Q ss_pred HHHhhc--CCCceEEEEcCC-----ChhhhHHHHHHHHhhCCCcEEEEeCCC
Q 021144 234 ASIADS--CEQVVAVGINCT-----SPRFIHGLILSVRKVTSKPVIIYPNSG 278 (317)
Q Consensus 234 ~~~~~~--~~~~~aiGvNC~-----~p~~~~~~l~~l~~~~~~pl~vyPNaG 278 (317)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|=+-+
T Consensus 116 i~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~~lPiilYn~P~ 167 (343)
T 2v9d_A 116 IELSQHAQQAGADGIVVINPYYWKVSEANLIRYFEQVADSVTLPVMLYNFPA 167 (343)
T ss_dssp HHHHHHHHHHTCSEEEEECCSSSCCCHHHHHHHHHHHHHTCSSCEEEEECHH
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCch
Confidence 655432 247888887652 236677777788888899999998754
No 26
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=94.44 E-value=0.31 Score=45.14 Aligned_cols=102 Identities=15% Similarity=0.098 Sum_probs=69.4
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEe-----ccC-CCHHHHHHHHHHHHHh-CCCccEEEEEEEcCCCcccCCCcHHHH
Q 021144 161 VSLETLKEFHRRRVLILANSGADLIAF-----ETI-PNKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILEC 233 (317)
Q Consensus 161 ~s~~el~~~h~~qi~~l~~~gvD~l~~-----ET~-p~~~Ea~a~~~~~~~~-~~~~pv~iSf~~~~~~~l~~G~~l~~a 233 (317)
++.+.+ +..++.+++.|||.|++ |.. -+.+|-+.+++.+.+. ...+||++.. |.+..++
T Consensus 30 iD~~~l----~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGv----------g~~t~~a 95 (316)
T 3e96_A 30 IDWHHY----KETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGI----------GYATSTA 95 (316)
T ss_dssp BCHHHH----HHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEE----------CSSHHHH
T ss_pred CCHHHH----HHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEe----------CcCHHHH
Confidence 666554 44677888899999875 311 1577877788776553 3368999876 2245666
Q ss_pred HHHhhc--CCCceEEEEcCC-----ChhhhHHHHHHHHhhCCCcEEEEeC
Q 021144 234 ASIADS--CEQVVAVGINCT-----SPRFIHGLILSVRKVTSKPVIIYPN 276 (317)
Q Consensus 234 ~~~~~~--~~~~~aiGvNC~-----~p~~~~~~l~~l~~~~~~pl~vyPN 276 (317)
++..+. ..+++++.+-+- +.+.+....+.+.+.++.|+++|-+
T Consensus 96 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~ 145 (316)
T 3e96_A 96 IELGNAAKAAGADAVMIHMPIHPYVTAGGVYAYFRDIIEALDFPSLVYFK 145 (316)
T ss_dssp HHHHHHHHHHTCSEEEECCCCCSCCCHHHHHHHHHHHHHHHTSCEEEEEC
T ss_pred HHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 655432 247888887542 3466777778888888999999976
No 27
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=94.38 E-value=0.33 Score=44.77 Aligned_cols=105 Identities=11% Similarity=-0.011 Sum_probs=71.1
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEe-----ccC-CCHHHHHHHHHHHHHh-CCCccEEEEEEEcCCCcccCCCcHHHH
Q 021144 161 VSLETLKEFHRRRVLILANSGADLIAF-----ETI-PNKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILEC 233 (317)
Q Consensus 161 ~s~~el~~~h~~qi~~l~~~gvD~l~~-----ET~-p~~~Ea~a~~~~~~~~-~~~~pv~iSf~~~~~~~l~~G~~l~~a 233 (317)
++.+. ++..++.+++.|||.|++ |.. -+.+|-+.+++.+.+. +..+||++.. .+.+..++
T Consensus 32 iD~~~----l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv---------g~~~t~~a 98 (307)
T 3s5o_A 32 VDYGK----LEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGS---------GCESTQAT 98 (307)
T ss_dssp BCHHH----HHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEEC---------CCSSHHHH
T ss_pred cCHHH----HHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEec---------CCCCHHHH
Confidence 66654 444677888999998864 322 2577878888877664 3468998765 23456666
Q ss_pred HHHhhc--CCCceEEEEcCC-------ChhhhHHHHHHHHhhCCCcEEEEeCCC
Q 021144 234 ASIADS--CEQVVAVGINCT-------SPRFIHGLILSVRKVTSKPVIIYPNSG 278 (317)
Q Consensus 234 ~~~~~~--~~~~~aiGvNC~-------~p~~~~~~l~~l~~~~~~pl~vyPNaG 278 (317)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|=+-+
T Consensus 99 i~la~~A~~~Gadavlv~~P~y~~~~~s~~~l~~~f~~ia~a~~lPiilYn~P~ 152 (307)
T 3s5o_A 99 VEMTVSMAQVGADAAMVVTPCYYRGRMSSAALIHHYTKVADLSPIPVVLYSVPA 152 (307)
T ss_dssp HHHHHHHHHTTCSEEEEECCCTTGGGCCHHHHHHHHHHHHHHCSSCEEEEECHH
T ss_pred HHHHHHHHHcCCCEEEEcCCCcCCCCCCHHHHHHHHHHHHhhcCCCEEEEeCCc
Confidence 655432 258888888542 224566677778778899999998754
No 28
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=94.36 E-value=0.44 Score=44.02 Aligned_cols=105 Identities=13% Similarity=0.085 Sum_probs=70.0
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEe-----ccC-CCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHH
Q 021144 161 VSLETLKEFHRRRVLILANSGADLIAF-----ETI-PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECA 234 (317)
Q Consensus 161 ~s~~el~~~h~~qi~~l~~~gvD~l~~-----ET~-p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~ 234 (317)
++.+.+ +..++.+++.|||.|++ |.. -+.+|-+.+++.+.+...++||++.. .+.+..+++
T Consensus 26 iD~~~l----~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvpViaGv---------g~~~t~~ai 92 (313)
T 3dz1_A 26 IDDVSI----DRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSMQVIVGV---------SAPGFAAMR 92 (313)
T ss_dssp BCHHHH----HHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEEEC---------CCSSHHHHH
T ss_pred cCHHHH----HHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCCcEEEec---------CCCCHHHHH
Confidence 676554 44677888899998865 311 25778778887766543468999866 234566666
Q ss_pred HHhhc--CCCceEEEEcCC----ChhhhHHHHHHHHhhCC--CcEEEEeCCC
Q 021144 235 SIADS--CEQVVAVGINCT----SPRFIHGLILSVRKVTS--KPVIIYPNSG 278 (317)
Q Consensus 235 ~~~~~--~~~~~aiGvNC~----~p~~~~~~l~~l~~~~~--~pl~vyPNaG 278 (317)
+..+. ..+++++.+-.- +.+.+....+.+.+.++ .|+++|=+-+
T Consensus 93 ~la~~A~~~Gadavlv~~P~~~~s~~~l~~~f~~va~a~~~~lPiilYn~P~ 144 (313)
T 3dz1_A 93 RLARLSMDAGAAGVMIAPPPSLRTDEQITTYFRQATEAIGDDVPWVLQDYPL 144 (313)
T ss_dssp HHHHHHHHHTCSEEEECCCTTCCSHHHHHHHHHHHHHHHCTTSCEEEEECHH
T ss_pred HHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHhCCCCCcEEEEeCcc
Confidence 55432 247888887432 23566667777777777 9999997743
No 29
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=94.33 E-value=0.33 Score=44.69 Aligned_cols=105 Identities=19% Similarity=0.120 Sum_probs=71.0
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEe-----ccC-CCHHHHHHHHHHHHHh-CCCccEEEEEEEcCCCcccCCCcHHHH
Q 021144 161 VSLETLKEFHRRRVLILANSGADLIAF-----ETI-PNKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILEC 233 (317)
Q Consensus 161 ~s~~el~~~h~~qi~~l~~~gvD~l~~-----ET~-p~~~Ea~a~~~~~~~~-~~~~pv~iSf~~~~~~~l~~G~~l~~a 233 (317)
++.+.++ ..++.+++.|||.|++ |.. -+.+|-+.+++.+.+. ..++||++.. .+.+..++
T Consensus 29 iD~~~l~----~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGv---------g~~~t~~a 95 (303)
T 2wkj_A 29 LDKASLR----RLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHV---------GCVSTAES 95 (303)
T ss_dssp BCHHHHH----HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEEC---------CCSSHHHH
T ss_pred cCHHHHH----HHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec---------CCCCHHHH
Confidence 6665544 4677788899999875 432 3577877888776653 3368999866 23456666
Q ss_pred HHHhhc--CCCceEEEEcCC-----ChhhhHHHHHHHHhhCC-CcEEEEeCCC
Q 021144 234 ASIADS--CEQVVAVGINCT-----SPRFIHGLILSVRKVTS-KPVIIYPNSG 278 (317)
Q Consensus 234 ~~~~~~--~~~~~aiGvNC~-----~p~~~~~~l~~l~~~~~-~pl~vyPNaG 278 (317)
++..+. ..+++++.+-.- +.+.+....+.+.+.++ .|+++|=+-+
T Consensus 96 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~~lPiilYn~P~ 148 (303)
T 2wkj_A 96 QQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPA 148 (303)
T ss_dssp HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHTTCCEEEEECHH
T ss_pred HHHHHHHHhCCCCEEEecCCCCCCCCHHHHHHHHHHHHHhCCCCCEEEEeCcc
Confidence 655432 247888887652 23566777777777778 9999998753
No 30
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=94.31 E-value=0.31 Score=44.58 Aligned_cols=105 Identities=16% Similarity=0.180 Sum_probs=68.7
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEe-----ccC-CCHHHHHHHHHHHHHh-CCCccEEEEEEEcCCCcccCCCcHHHH
Q 021144 161 VSLETLKEFHRRRVLILANSGADLIAF-----ETI-PNKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILEC 233 (317)
Q Consensus 161 ~s~~el~~~h~~qi~~l~~~gvD~l~~-----ET~-p~~~Ea~a~~~~~~~~-~~~~pv~iSf~~~~~~~l~~G~~l~~a 233 (317)
++.+. ++..++.+++.|||.|++ |.. -+.+|-+.+++.+.+. ..++||++.. .+.+..++
T Consensus 19 iD~~~----l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gv---------g~~~t~~a 85 (291)
T 3a5f_A 19 VDFDK----LSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGT---------GSNNTAAS 85 (291)
T ss_dssp BCHHH----HHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSSHHHH
T ss_pred cCHHH----HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC---------CcccHHHH
Confidence 45544 444677888899999875 432 3577877777776653 3368999776 23456666
Q ss_pred HHHhhc--CCCceEEEEcCC-----ChhhhHHHHHHHHhhCCCcEEEEeCCC
Q 021144 234 ASIADS--CEQVVAVGINCT-----SPRFIHGLILSVRKVTSKPVIIYPNSG 278 (317)
Q Consensus 234 ~~~~~~--~~~~~aiGvNC~-----~p~~~~~~l~~l~~~~~~pl~vyPNaG 278 (317)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|=+-+
T Consensus 86 i~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~ 137 (291)
T 3a5f_A 86 IAMSKWAESIGVDGLLVITPYYNKTTQKGLVKHFKAVSDAVSTPIIIYNVPG 137 (291)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHC-CTGGGCCSCEEEEECHH
T ss_pred HHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCcc
Confidence 655432 258888888663 234555555666667789999998754
No 31
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=94.22 E-value=0.62 Score=42.49 Aligned_cols=103 Identities=16% Similarity=0.212 Sum_probs=69.0
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEe-----ccC-CCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHH
Q 021144 161 VSLETLKEFHRRRVLILANSGADLIAF-----ETI-PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECA 234 (317)
Q Consensus 161 ~s~~el~~~h~~qi~~l~~~gvD~l~~-----ET~-p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~ 234 (317)
++.+.++ ..++.+++.|||.|++ |.. -+.+|-+.+++.+.+...+ |++.. .+.+..+++
T Consensus 17 iD~~~l~----~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g--ViaGv---------g~~~t~~ai 81 (288)
T 2nuw_A 17 VNVDALK----THAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHK--LIFQV---------GSLNLNDVM 81 (288)
T ss_dssp BCHHHHH----HHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSC--EEEEC---------CCSCHHHHH
T ss_pred cCHHHHH----HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--eEEee---------CCCCHHHHH
Confidence 6665544 4677788899999876 422 3577888888887765423 55443 234566666
Q ss_pred HHhh--cCCCceEEEEcCC------ChhhhHHHHHHHHhhCCCcEEEEeCCC
Q 021144 235 SIAD--SCEQVVAVGINCT------SPRFIHGLILSVRKVTSKPVIIYPNSG 278 (317)
Q Consensus 235 ~~~~--~~~~~~aiGvNC~------~p~~~~~~l~~l~~~~~~pl~vyPNaG 278 (317)
+..+ +..+++++.+-.- +.+.+....+.+.+.++.|+++|=+-+
T Consensus 82 ~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P~ 133 (288)
T 2nuw_A 82 ELVKFSNEMDILGVSSHSPYYFPRLPEKFLAKYYEEIARISSHSLYIYNYPA 133 (288)
T ss_dssp HHHHHHHTSCCSEEEECCCCSSCSCCHHHHHHHHHHHHHHCCSCEEEEECHH
T ss_pred HHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCEEEEECch
Confidence 5553 2358899888652 225566677777878899999998754
No 32
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=94.22 E-value=0.51 Score=43.16 Aligned_cols=105 Identities=11% Similarity=0.067 Sum_probs=71.7
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEe-----ccC-CCHHHHHHHHHHHHHh-CCCccEEEEEEEcCCCcccCCCcHHHH
Q 021144 161 VSLETLKEFHRRRVLILANSGADLIAF-----ETI-PNKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILEC 233 (317)
Q Consensus 161 ~s~~el~~~h~~qi~~l~~~gvD~l~~-----ET~-p~~~Ea~a~~~~~~~~-~~~~pv~iSf~~~~~~~l~~G~~l~~a 233 (317)
++.+.++ ..++.+++.|||.|++ |.. -+.+|-+.+++.+.+. ..++||++.. .+.+..++
T Consensus 21 iD~~~l~----~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv---------g~~~t~~a 87 (294)
T 3b4u_A 21 VDIDAMI----AHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGV---------LVDSIEDA 87 (294)
T ss_dssp BCHHHHH----HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEE---------CCSSHHHH
T ss_pred cCHHHHH----HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC---------CCccHHHH
Confidence 6765544 4677788899999875 422 3577888888877764 3368999877 23455666
Q ss_pred HHHhhc--CCCceEEEEcCC---C---hhhhHHHHHHHHhhC---CCcEEEEeCCC
Q 021144 234 ASIADS--CEQVVAVGINCT---S---PRFIHGLILSVRKVT---SKPVIIYPNSG 278 (317)
Q Consensus 234 ~~~~~~--~~~~~aiGvNC~---~---p~~~~~~l~~l~~~~---~~pl~vyPNaG 278 (317)
++..+. ..+++++.+-.- . .+.+....+.+.+.+ +.|+++|=+-+
T Consensus 88 i~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~p~~~lPiilYn~P~ 143 (294)
T 3b4u_A 88 ADQSAEALNAGARNILLAPPSYFKNVSDDGLFAWFSAVFSKIGKDARDILVYNIPS 143 (294)
T ss_dssp HHHHHHHHHTTCSEEEECCCCSSCSCCHHHHHHHHHHHHHHHCTTCCCEEEEECHH
T ss_pred HHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCCCcEEEEECcc
Confidence 655432 258888888652 2 255666677777777 89999998754
No 33
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=94.18 E-value=0.68 Score=42.12 Aligned_cols=103 Identities=15% Similarity=0.105 Sum_probs=68.6
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEe-----ccC-CCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHH
Q 021144 161 VSLETLKEFHRRRVLILANSGADLIAF-----ETI-PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECA 234 (317)
Q Consensus 161 ~s~~el~~~h~~qi~~l~~~gvD~l~~-----ET~-p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~ 234 (317)
++.+.+ +..++.+++.|||.|++ |.. -+.+|-+.+++.+.+...+ |++.. .+.+..+++
T Consensus 16 iD~~~l----~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g--vi~Gv---------g~~~t~~ai 80 (286)
T 2r91_A 16 LDPELF----ANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR--VIVQV---------ASLNADEAI 80 (286)
T ss_dssp ECHHHH----HHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS--EEEEC---------CCSSHHHHH
T ss_pred cCHHHH----HHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--EEEee---------CCCCHHHHH
Confidence 666554 44677788899999875 422 2577888888887776423 55443 234566666
Q ss_pred HHhhc--CCCceEEEEcCC---C---hhhhHHHHHHHHhhCCCcEEEEeCCC
Q 021144 235 SIADS--CEQVVAVGINCT---S---PRFIHGLILSVRKVTSKPVIIYPNSG 278 (317)
Q Consensus 235 ~~~~~--~~~~~aiGvNC~---~---p~~~~~~l~~l~~~~~~pl~vyPNaG 278 (317)
+..+. ..+++++.+-.- . .+.+....+.+.+.++.|+++|=+-+
T Consensus 81 ~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P~ 132 (286)
T 2r91_A 81 ALAKYAESRGAEAVASLPPYYFPRLSERQIAKYFRDLCSAVSIPVFLYNYPA 132 (286)
T ss_dssp HHHHHHHHTTCSEEEECCSCSSTTCCHHHHHHHHHHHHHHCSSCEEEEECHH
T ss_pred HHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCEEEEeChh
Confidence 55432 258888888652 2 25566667777778899999998754
No 34
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=94.14 E-value=0.44 Score=43.57 Aligned_cols=105 Identities=14% Similarity=0.120 Sum_probs=70.0
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEe-----ccC-CCHHHHHHHHHHHHHh-CCCccEEEEEEEcCCCcccCCCcHHHH
Q 021144 161 VSLETLKEFHRRRVLILANSGADLIAF-----ETI-PNKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILEC 233 (317)
Q Consensus 161 ~s~~el~~~h~~qi~~l~~~gvD~l~~-----ET~-p~~~Ea~a~~~~~~~~-~~~~pv~iSf~~~~~~~l~~G~~l~~a 233 (317)
++.+. ++..++.+++.|||.|++ |.. -+.+|-+.+++.+.+. ..+.||++.. .+.+..++
T Consensus 20 iD~~~----l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGv---------g~~~t~~a 86 (292)
T 3daq_A 20 VNLEA----LKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGT---------GTNDTEKS 86 (292)
T ss_dssp ECHHH----HHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSCHHHH
T ss_pred cCHHH----HHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeC---------CcccHHHH
Confidence 56554 444677888899999875 311 1477877777776553 3468999876 23456666
Q ss_pred HHHhhc--CCCceEEEEcCC-----ChhhhHHHHHHHHhhCCCcEEEEeCCC
Q 021144 234 ASIADS--CEQVVAVGINCT-----SPRFIHGLILSVRKVTSKPVIIYPNSG 278 (317)
Q Consensus 234 ~~~~~~--~~~~~aiGvNC~-----~p~~~~~~l~~l~~~~~~pl~vyPNaG 278 (317)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|=+-+
T Consensus 87 i~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~ 138 (292)
T 3daq_A 87 IQASIQAKALGADAIMLITPYYNKTNQRGLVKHFEAIADAVKLPVVLYNVPS 138 (292)
T ss_dssp HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHCSCEEEEECHH
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeccc
Confidence 655432 247888777652 235667777788777899999997653
No 35
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=94.11 E-value=1.4 Score=39.19 Aligned_cols=95 Identities=18% Similarity=0.075 Sum_probs=57.7
Q ss_pred HHHHHHhCCCCEE---EeccCCCHH----HHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcH---HHHHHHhhcCCC
Q 021144 173 RVLILANSGADLI---AFETIPNKL----EAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSI---LECASIADSCEQ 242 (317)
Q Consensus 173 qi~~l~~~gvD~l---~~ET~p~~~----Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l---~~a~~~~~~~~~ 242 (317)
+++...+.|+|.+ +..--++.. +++.+++++++.+ .|+++-... ++.++..|.+. .++++.+.+ .+
T Consensus 104 ~v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g--~~viv~~~~-~G~~l~~~~~~~~~~~~a~~a~~-~G 179 (273)
T 2qjg_A 104 TVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWG--MPLIAMMYP-RGKHIQNERDPELVAHAARLGAE-LG 179 (273)
T ss_dssp CHHHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHT--CCEEEEEEE-CSTTCSCTTCHHHHHHHHHHHHH-TT
T ss_pred HHHHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcC--CCEEEEeCC-CCcccCCCCCHhHHHHHHHHHHH-cC
Confidence 4556667899998 556555544 4556677777665 888875432 33344445444 444455544 58
Q ss_pred ceEEEEcCCChhhhHHHHHHHHhhCCCcEEEE
Q 021144 243 VVAVGINCTSPRFIHGLILSVRKVTSKPVIIY 274 (317)
Q Consensus 243 ~~aiGvNC~~p~~~~~~l~~l~~~~~~pl~vy 274 (317)
++.|+++=. .=...++++.+..+.|+++.
T Consensus 180 ad~i~~~~~---~~~~~l~~i~~~~~ipvva~ 208 (273)
T 2qjg_A 180 ADIVKTSYT---GDIDSFRDVVKGCPAPVVVA 208 (273)
T ss_dssp CSEEEECCC---SSHHHHHHHHHHCSSCEEEE
T ss_pred CCEEEECCC---CCHHHHHHHHHhCCCCEEEE
Confidence 899999832 11345566666667887663
No 36
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=93.93 E-value=0.62 Score=42.78 Aligned_cols=105 Identities=16% Similarity=0.118 Sum_probs=70.9
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEe-----ccC-CCHHHHHHHHHHHHHh-CCCccEEEEEEEcCCCcccCCCcHHHH
Q 021144 161 VSLETLKEFHRRRVLILANSGADLIAF-----ETI-PNKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILEC 233 (317)
Q Consensus 161 ~s~~el~~~h~~qi~~l~~~gvD~l~~-----ET~-p~~~Ea~a~~~~~~~~-~~~~pv~iSf~~~~~~~l~~G~~l~~a 233 (317)
++.+.+ +..++.+++.|||.|++ |.. -+.+|-+.+++.+.+. +.++||++.... .+..++
T Consensus 22 iD~~~l----~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~---------~~t~~a 88 (300)
T 3eb2_A 22 VRADVM----GRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVAS---------TSVADA 88 (300)
T ss_dssp BCHHHH----HHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEE---------SSHHHH
T ss_pred cCHHHH----HHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCC---------CCHHHH
Confidence 666554 44677788899999863 422 2577877888776553 346899988743 344555
Q ss_pred HHHhhc--CCCceEEEEcCC-----ChhhhHHHHHHHHhhCCCcEEEEeCCC
Q 021144 234 ASIADS--CEQVVAVGINCT-----SPRFIHGLILSVRKVTSKPVIIYPNSG 278 (317)
Q Consensus 234 ~~~~~~--~~~~~aiGvNC~-----~p~~~~~~l~~l~~~~~~pl~vyPNaG 278 (317)
++.++. ..+++++.+-.- +.+.+....+.+.+.++.|+++|=+-+
T Consensus 89 i~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~ 140 (300)
T 3eb2_A 89 VAQAKLYEKLGADGILAILEAYFPLKDAQIESYFRAIADAVEIPVVIYTNPQ 140 (300)
T ss_dssp HHHHHHHHHHTCSEEEEEECCSSCCCHHHHHHHHHHHHHHCSSCEEEEECTT
T ss_pred HHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECcc
Confidence 554432 247788777542 346677777888888899999998765
No 37
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=93.76 E-value=0.91 Score=41.44 Aligned_cols=103 Identities=15% Similarity=0.142 Sum_probs=68.5
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEe-----ccC-CCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHH
Q 021144 161 VSLETLKEFHRRRVLILANSGADLIAF-----ETI-PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECA 234 (317)
Q Consensus 161 ~s~~el~~~h~~qi~~l~~~gvD~l~~-----ET~-p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~ 234 (317)
++.+.++ ..++.+++.|||.|++ |.. -+.+|-+.+++.+.+...+ |++.. .+.+..+++
T Consensus 17 iD~~~l~----~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~g--viaGv---------g~~~t~~ai 81 (293)
T 1w3i_A 17 IDKEKLK----IHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNK--IIFQV---------GGLNLDDAI 81 (293)
T ss_dssp BCHHHHH----HHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSC--EEEEC---------CCSCHHHHH
T ss_pred cCHHHHH----HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCC--EEEec---------CCCCHHHHH
Confidence 6765544 4677788899998875 322 2577888888888775423 55443 234567776
Q ss_pred HHhhc--CCCceEEEEcCC---C---hhhhHHHHHHHHhhCCCcEEEEeCCC
Q 021144 235 SIADS--CEQVVAVGINCT---S---PRFIHGLILSVRKVTSKPVIIYPNSG 278 (317)
Q Consensus 235 ~~~~~--~~~~~aiGvNC~---~---p~~~~~~l~~l~~~~~~pl~vyPNaG 278 (317)
+..+. ..+++++.+-.- . .+.+....+.+.+.++.|+++|=+-+
T Consensus 82 ~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P~ 133 (293)
T 1w3i_A 82 RLAKLSKDFDIVGIASYAPYYYPRMSEKHLVKYFKTLCEVSPHPVYLYNYPT 133 (293)
T ss_dssp HHHHHGGGSCCSEEEEECCCSCSSCCHHHHHHHHHHHHHHCSSCEEEEECHH
T ss_pred HHHHHHHhcCCCEEEEcCCCCCCCCCHHHHHHHHHHHHhhCCCCEEEEECch
Confidence 65532 358888887552 2 25566667777778899999998754
No 38
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=93.68 E-value=2.6 Score=40.38 Aligned_cols=156 Identities=21% Similarity=0.229 Sum_probs=93.0
Q ss_pred hHHHHHHHHH----HHHhhccccccccccccHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCC
Q 021144 54 PHLVRKVHLD----YLDAGANIIITASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRI 129 (317)
Q Consensus 54 Pe~V~~iH~~----Yl~AGAdiI~TnTy~as~~~l~~~g~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~~~~~~ 129 (317)
.|.+++.|++ ++++|+|+|.--|+.... +++.+ ++++++
T Consensus 134 ~eel~~~~~eqi~~L~~~GvDlll~ETi~~~~-----------Eakaa----~~a~~~---------------------- 176 (406)
T 1lt8_A 134 ETEVKKVFLQQLEVFMKKNVDFLIAEYFEHVE-----------EAVWA----VETLIA---------------------- 176 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEECCCSCHH-----------HHHHH----HHHHGG----------------------
T ss_pred HHHHHHHHHHHHHHHhhCCCCEEEEcccCCHH-----------HHHHH----HHHHHH----------------------
Confidence 4667777764 457899999988887442 23322 222221
Q ss_pred CCCCeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHh---
Q 021144 130 SSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEE--- 206 (317)
Q Consensus 130 ~~~~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~--- 206 (317)
.+.+++|..++..-|. +. | .+.++. +..+.+.++|.|.+..-...+++..+++.+++.
T Consensus 177 ~~lPv~iS~T~~~~G~-l~------G-----~~~~~~-------~~~l~~~~~~avGvNC~~gP~~~~~~l~~l~~~~~~ 237 (406)
T 1lt8_A 177 SGKPVAATMAIGPEGD-LH------G-----VPPGEA-------AVRLVKAGASIIGVNCHFDPTISLKTVKLMKEGLEA 237 (406)
T ss_dssp GTSCEEEEECCBTTBC-TT------C-----CCHHHH-------HHHHHTTTCSEEEEESSSCHHHHHHHHHHHHHHHHT
T ss_pred hCCcEEEEEEECCCCC-cC------C-----CcHHHH-------HHHhhcCCCCEEEecCCCCHHHHHHHHHHHHHhhhh
Confidence 1248999999976665 32 2 244443 334555789999999876788888888777753
Q ss_pred -CCCccEEEEEE---EcC---CCccc------CCC-------cHHHHHHHhhcCCCceEEEEcCC-ChhhhHHHHHHHHh
Q 021144 207 -GITIPAWFSFN---SKD---GINVV------SGD-------SILECASIADSCEQVVAVGINCT-SPRFIHGLILSVRK 265 (317)
Q Consensus 207 -~~~~pv~iSf~---~~~---~~~l~------~G~-------~l~~a~~~~~~~~~~~aiGvNC~-~p~~~~~~l~~l~~ 265 (317)
+.++|+++--. ..+ ++... +++ .+.+.++.... .++..||=-|. .|+++..+-+.+..
T Consensus 238 ~g~~~pl~vyPNag~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~w~~-~Ga~iIGGCCGTtPeHI~aia~~l~~ 316 (406)
T 1lt8_A 238 AQLKAHLMSQPLAYHTPDANKQGFIDLPEFPFGLEPRVATRWDIQKYAREAYN-LGVRYIGGCCGFEPYHIRAIAEELAP 316 (406)
T ss_dssp TTCCCEEEEECCSBCCTTCCTTCGGGSTTTTTSCGGGBCCHHHHHHHHHHHHH-HTEEEECCCTTCCHHHHHHHHHHTHH
T ss_pred cCCCccEEEecCCCCCCcCCcccccCCccccccCCHHHHHHHHHHHHHHHHHh-CCCeEEEEecCCCHHHHHHHHHHHhc
Confidence 22466643211 000 00110 111 14444433333 47889999995 89999888776654
Q ss_pred h
Q 021144 266 V 266 (317)
Q Consensus 266 ~ 266 (317)
.
T Consensus 317 ~ 317 (406)
T 1lt8_A 317 E 317 (406)
T ss_dssp H
T ss_pred c
Confidence 3
No 39
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=93.67 E-value=1.6 Score=43.68 Aligned_cols=158 Identities=13% Similarity=0.059 Sum_probs=98.2
Q ss_pred hHHHHHHHHHH----HHhhccccccccccccHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCC
Q 021144 54 PHLVRKVHLDY----LDAGANIIITASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRI 129 (317)
Q Consensus 54 Pe~V~~iH~~Y----l~AGAdiI~TnTy~as~~~l~~~g~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~~~~~~ 129 (317)
.|.+++.|++= +++|+|+|.--|+.... +++ .+++.+++..
T Consensus 121 ~~e~~~~~~~qi~~l~~~gvD~l~~ET~~~~~-----------Ea~----aa~~a~~~~~-------------------- 165 (566)
T 1q7z_A 121 FEEFYENFRETVEIMVEEGVDGIIFETFSDIL-----------ELK----AAVLAAREVS-------------------- 165 (566)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEEEECCHH-----------HHH----HHHHHHHHHC--------------------
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEeccCCHH-----------HHH----HHHHHHHHhC--------------------
Confidence 46777777644 57899999988887442 222 2333333321
Q ss_pred CCCCeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCC
Q 021144 130 SSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGIT 209 (317)
Q Consensus 130 ~~~~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~ 209 (317)
.+.+++|..++..-|..+. | .+.+++ +..+...++|.+.+..-...+++..+++.+++.. +
T Consensus 166 ~~~Pv~vS~t~~~~g~~~~------G-----~~~~~~-------~~~l~~~~~~avG~NC~~gp~~~~~~l~~l~~~~-~ 226 (566)
T 1q7z_A 166 RDVFLIAHMTFDEKGRSLT------G-----TDPANF-------AITFDELDIDALGINCSLGPEEILPIFQELSQYT-D 226 (566)
T ss_dssp SSSCEEEEECCCTTSCCTT------S-----CCHHHH-------HHHHHTSSCSEEEEESSSCHHHHHHHHHHHHHTC-C
T ss_pred CCCcEEEEEEEcCCCeeCC------C-----CcHHHH-------HHHhhccCCCEEEEeCCCCHHHHHHHHHHHHhcC-C
Confidence 1358999999987665442 2 254443 3345557899999999878899999998888653 5
Q ss_pred ccEEEEEEE--c--CCCcccCCCcHHHHHHH---hhcCCCceEEEEcCC-ChhhhHHHHHHHHhh
Q 021144 210 IPAWFSFNS--K--DGINVVSGDSILECASI---ADSCEQVVAVGINCT-SPRFIHGLILSVRKV 266 (317)
Q Consensus 210 ~pv~iSf~~--~--~~~~l~~G~~l~~a~~~---~~~~~~~~aiGvNC~-~p~~~~~~l~~l~~~ 266 (317)
+|+.+--.- . .++....-.+.++.++. ..+ .++..||=-|. .|+|+..+-+.++..
T Consensus 227 ~p~~vyPNaG~p~~~~~~~~~~~~p~~~a~~~~~~~~-~G~~iiGGCCGTtP~hI~aia~~~~~~ 290 (566)
T 1q7z_A 227 KFLVVEPNAGKPIVENGKTVYPLKPHDFAVHIDSYYE-LGVNIFGGCCGTTPEHVKLFRKVLGNR 290 (566)
T ss_dssp SEEEEECCSSSCEEETTEEECCCCHHHHHTTHHHHHH-TTCSEECCCTTCCHHHHHHHHHHHCSC
T ss_pred CEEEEEcCCCCCcccCCccccCCCHHHHHHHHHHHHH-cCCcEEccccCCCHHHHHHHHHHhcCC
Confidence 676432210 0 01221111234443333 223 46889999994 899999888877654
No 40
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=93.38 E-value=1 Score=41.66 Aligned_cols=84 Identities=15% Similarity=0.090 Sum_probs=53.9
Q ss_pred HHHHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcC
Q 021144 171 RRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINC 250 (317)
Q Consensus 171 ~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC 250 (317)
.+|++++.++|+|+|++|-+++.+|++.+++.+. ++|+++.++. .+.+ ...++++..+ .++.-|-..+
T Consensus 181 i~Ra~ay~eAGAD~ifi~~~~~~~~~~~i~~~~~----~~Pv~~n~~~--~g~~-p~~t~~eL~~-----lGv~~v~~~~ 248 (307)
T 3lye_A 181 IERLRAARDEGADVGLLEGFRSKEQAAAAVAALA----PWPLLLNSVE--NGHS-PLITVEEAKA-----MGFRIMIFSF 248 (307)
T ss_dssp HHHHHHHHHTTCSEEEECCCSCHHHHHHHHHHHT----TSCBEEEEET--TSSS-CCCCHHHHHH-----HTCSEEEEET
T ss_pred HHHHHHHHHCCCCEEEecCCCCHHHHHHHHHHcc----CCceeEEeec--CCCC-CCCCHHHHHH-----cCCeEEEECh
Confidence 4589999999999999999999999999888775 3788876643 2222 1234443322 2444333333
Q ss_pred CC----hhhhHHHHHHHHhh
Q 021144 251 TS----PRFIHGLILSVRKV 266 (317)
Q Consensus 251 ~~----p~~~~~~l~~l~~~ 266 (317)
+. ...|...++.|++.
T Consensus 249 ~~~raa~~a~~~~~~~l~~~ 268 (307)
T 3lye_A 249 ATLAPAYAAIRETLVRLRDH 268 (307)
T ss_dssp TTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 32 24566666666654
No 41
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=93.35 E-value=0.61 Score=43.77 Aligned_cols=102 Identities=11% Similarity=0.078 Sum_probs=68.8
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEe-----cc-CCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHH
Q 021144 161 VSLETLKEFHRRRVLILANSGADLIAF-----ET-IPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECA 234 (317)
Q Consensus 161 ~s~~el~~~h~~qi~~l~~~gvD~l~~-----ET-~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~ 234 (317)
++.+.++ ..++.+++.|||.|++ |. .-+.+|-+.+++. ...+ ++||++.. .+.+..+++
T Consensus 44 ID~~~l~----~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~-~~~g-rvpViaGv---------g~~st~eai 108 (344)
T 2hmc_A 44 PDFDALV----RKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVER-LVKA-GIPVIVGT---------GAVNTASAV 108 (344)
T ss_dssp BCHHHHH----HHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHH-HHHT-TCCEEEEC---------CCSSHHHHH
T ss_pred cCHHHHH----HHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHH-HhCC-CCcEEEec---------CCCCHHHHH
Confidence 6765544 4677788899999875 32 2357787788877 3333 68999776 234566666
Q ss_pred HHhhc--CCCceEEEEcCC---C-h--hhhHHHHHHHHh-hCCCcEEEEeCC
Q 021144 235 SIADS--CEQVVAVGINCT---S-P--RFIHGLILSVRK-VTSKPVIIYPNS 277 (317)
Q Consensus 235 ~~~~~--~~~~~aiGvNC~---~-p--~~~~~~l~~l~~-~~~~pl~vyPNa 277 (317)
+..+. ..+++++.+-.- . | +.+....+.+.+ .++.|+++|=+-
T Consensus 109 ~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~IA~aa~~lPiilYn~P 160 (344)
T 2hmc_A 109 AHAVHAQKVGAKGLMVIPRVLSRGSVIAAQKAHFKAILSAAPEIPAVIYNSP 160 (344)
T ss_dssp HHHHHHHHHTCSEEEECCCCSSSTTCHHHHHHHHHHHHHHSTTSCEEEEEBG
T ss_pred HHHHHHHhcCCCEEEECCCccCCCCCHHHHHHHHHHHHhhCCCCcEEEEecC
Confidence 55432 247888888663 2 2 456666777887 788999999764
No 42
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=92.82 E-value=0.79 Score=42.32 Aligned_cols=100 Identities=13% Similarity=0.037 Sum_probs=67.3
Q ss_pred HHHHHHHHHhCCCCEEEe-ccCC-----CHHHHHHHHHHHHHh-CCCccEEEEEEEcCCCcccCCCcHHHHHHHhhc--C
Q 021144 170 HRRRVLILANSGADLIAF-ETIP-----NKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILECASIADS--C 240 (317)
Q Consensus 170 h~~qi~~l~~~gvD~l~~-ET~p-----~~~Ea~a~~~~~~~~-~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~--~ 240 (317)
++..++.+++.|||.|++ -|-. +.+|-+.+++.+.+. ..++||++.. .+.+..++++..+. .
T Consensus 30 l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGv---------g~~~t~~ai~la~~A~~ 100 (311)
T 3h5d_A 30 IPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGV---------GTNDTRDSIEFVKEVAE 100 (311)
T ss_dssp HHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEEC---------CCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC---------CCcCHHHHHHHHHHHHh
Confidence 445677888899997653 3322 577888888877664 3468999876 23456666655432 1
Q ss_pred CCc-eEEEEcCC-----ChhhhHHHHHHHHhhCCCcEEEEeCCC
Q 021144 241 EQV-VAVGINCT-----SPRFIHGLILSVRKVTSKPVIIYPNSG 278 (317)
Q Consensus 241 ~~~-~aiGvNC~-----~p~~~~~~l~~l~~~~~~pl~vyPNaG 278 (317)
.+. +++.+-+- +.+.+....+.+.+.++.|+++|=+-+
T Consensus 101 ~Ga~davlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~ 144 (311)
T 3h5d_A 101 FGGFAAGLAIVPYYNKPSQEGMYQHFKAIADASDLPIIIYNIPG 144 (311)
T ss_dssp SCCCSEEEEECCCSSCCCHHHHHHHHHHHHHSCSSCEEEEECHH
T ss_pred cCCCcEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeccc
Confidence 354 88777652 235667777788888899999997643
No 43
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=92.34 E-value=5.8 Score=35.96 Aligned_cols=132 Identities=17% Similarity=0.122 Sum_probs=77.9
Q ss_pred HHHHhhccccccccccccHHHH-HhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCCCeEEEEeeC
Q 021144 63 DYLDAGANIIITASYQATIQGF-EAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSRPVLVAASVG 141 (317)
Q Consensus 63 ~Yl~AGAdiI~TnTy~as~~~l-~~~g~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~~~~~~~~~~~~VagsiG 141 (317)
.-+++|+++|... ..+|.... ...+.+.++..+....+++.|++. + ..|-+.+.
T Consensus 88 ~a~~ag~~~v~i~-~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~----------------------G--~~v~~~l~ 142 (298)
T 2cw6_A 88 AAVAAGAKEVVIF-GAASELFTKKNINCSIEESFQRFDAILKAAQSA----------------------N--ISVRGYVS 142 (298)
T ss_dssp HHHHTTCSEEEEE-EESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHT----------------------T--CEEEEEEE
T ss_pred HHHHCCCCEEEEE-ecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHC----------------------C--CeEEEEEE
Confidence 3467899988763 34444332 233666665556666666665532 1 22334333
Q ss_pred C-CcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEe-ccC--CCHHHHHHHHHHHHHhCCCccEEEEEE
Q 021144 142 S-YGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAF-ETI--PNKLEAKAYAELLEEEGITIPAWFSFN 217 (317)
Q Consensus 142 P-~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~-ET~--p~~~Ea~a~~~~~~~~~~~~pv~iSf~ 217 (317)
- ++. ||.+. .+.+. +.+.++.+.+.|+|.|.+ -|+ -+..++..+++.+++.-++.| ++|-
T Consensus 143 ~~~~~------~~~~~----~~~~~----~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~--i~~H 206 (298)
T 2cw6_A 143 CALGC------PYEGK----ISPAK----VAEVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEVPLAA--LAVH 206 (298)
T ss_dssp TTTCB------TTTBS----CCHHH----HHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHHSCGGG--EEEE
T ss_pred EEeeC------CcCCC----CCHHH----HHHHHHHHHHcCCCEEEecCCCCCcCHHHHHHHHHHHHHhCCCCe--EEEE
Confidence 2 222 33333 35544 445667788899999844 444 368888899998887542344 5676
Q ss_pred EcCCCcccCCCcHHHHHHHhhc
Q 021144 218 SKDGINVVSGDSILECASIADS 239 (317)
Q Consensus 218 ~~~~~~l~~G~~l~~a~~~~~~ 239 (317)
+.++ .|..+..+...+..
T Consensus 207 ~Hn~----~Gla~An~laA~~a 224 (298)
T 2cw6_A 207 CHDT----YGQALANTLMALQM 224 (298)
T ss_dssp EBCT----TSCHHHHHHHHHHT
T ss_pred ECCC----CchHHHHHHHHHHh
Confidence 6655 47777777777764
No 44
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=92.12 E-value=2.6 Score=38.75 Aligned_cols=132 Identities=20% Similarity=0.180 Sum_probs=78.1
Q ss_pred HHHHhhccccccccccccHHHH-HhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCCCeEEEEeeC
Q 021144 63 DYLDAGANIIITASYQATIQGF-EAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSRPVLVAASVG 141 (317)
Q Consensus 63 ~Yl~AGAdiI~TnTy~as~~~l-~~~g~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~~~~~~~~~~~~VagsiG 141 (317)
.-+++|+++|.... .+|.... ...+.+.++..+.....++.|++. ...|-+.+.
T Consensus 89 ~a~~~g~~~v~i~~-~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~------------------------G~~v~~~i~ 143 (307)
T 1ydo_A 89 NALEGGINEACVFM-SASETHNRKNINKSTSESLHILKQVNNDAQKA------------------------NLTTRAYLS 143 (307)
T ss_dssp HHHHHTCSEEEEEE-ESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHT------------------------TCEEEEEEE
T ss_pred HHHhCCcCEEEEEe-ecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHC------------------------CCEEEEEEE
Confidence 34678999877654 4444332 233667666556666666665532 123444443
Q ss_pred C-CcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEec-cC--CCHHHHHHHHHHHHHhCCCccEEEEEE
Q 021144 142 S-YGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFE-TI--PNKLEAKAYAELLEEEGITIPAWFSFN 217 (317)
Q Consensus 142 P-~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~E-T~--p~~~Ea~a~~~~~~~~~~~~pv~iSf~ 217 (317)
- ++. ||.+. .+.+ ++.+.++.+.+.|+|.|.+= |+ -...++..+++.+++.-++ +-++|-
T Consensus 144 ~~~~~------~~~~~----~~~~----~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~--~~l~~H 207 (307)
T 1ydo_A 144 TVFGC------PYEKD----VPIE----QVIRLSEALFEFGISELSLGDTIGAANPAQVETVLEALLARFPA--NQIALH 207 (307)
T ss_dssp CTTCB------TTTBC----CCHH----HHHHHHHHHHHHTCSCEEEECSSCCCCHHHHHHHHHHHHTTSCG--GGEEEE
T ss_pred EEecC------CcCCC----CCHH----HHHHHHHHHHhcCCCEEEEcCCCCCcCHHHHHHHHHHHHHhCCC--CeEEEE
Confidence 3 222 33333 3554 44556667778899988554 43 3688888999988864323 445676
Q ss_pred EcCCCcccCCCcHHHHHHHhhc
Q 021144 218 SKDGINVVSGDSILECASIADS 239 (317)
Q Consensus 218 ~~~~~~l~~G~~l~~a~~~~~~ 239 (317)
+.++ .|..+..++..+..
T Consensus 208 ~Hnd----~Gla~AN~laAv~a 225 (307)
T 1ydo_A 208 FHDT----RGTALANMVTALQM 225 (307)
T ss_dssp CBGG----GSCHHHHHHHHHHH
T ss_pred ECCC----CchHHHHHHHHHHh
Confidence 6554 47777777777754
No 45
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=91.99 E-value=2 Score=39.20 Aligned_cols=140 Identities=13% Similarity=0.058 Sum_probs=83.0
Q ss_pred CChHHHHHHHHHHHHhhccccccccccccHHHH-HhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCC
Q 021144 52 SSPHLVRKVHLDYLDAGANIIITASYQATIQGF-EAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRIS 130 (317)
Q Consensus 52 ~~Pe~V~~iH~~Yl~AGAdiI~TnTy~as~~~l-~~~g~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~~~~~~~ 130 (317)
.+.+-|++ -+++|.+.|.... .+|.... ...+.+.++..+..+..|+.|++.
T Consensus 84 ~~~~~i~~----a~~aG~~~v~i~~-~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~---------------------- 136 (302)
T 2ftp_A 84 PNLKGFEA----ALESGVKEVAVFA-AASEAFSQRNINCSIKDSLERFVPVLEAARQH---------------------- 136 (302)
T ss_dssp CSHHHHHH----HHHTTCCEEEEEE-ESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHT----------------------
T ss_pred CCHHHHHH----HHhCCcCEEEEEE-ecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHC----------------------
Confidence 34444444 4668999876532 3333322 233677666666666666666532
Q ss_pred CCCeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEecc---CCCHHHHHHHHHHHHHhC
Q 021144 131 SRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFET---IPNKLEAKAYAELLEEEG 207 (317)
Q Consensus 131 ~~~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~ET---~p~~~Ea~a~~~~~~~~~ 207 (317)
...|-+.|+-... .||.+. .+.+++.+ .++.+.+.|+|.|.+=+ +....+...+++.+++.-
T Consensus 137 --G~~V~~~l~~~~~-----~e~~~~----~~~~~~~~----~~~~~~~~G~d~i~l~DT~G~~~P~~~~~lv~~l~~~~ 201 (302)
T 2ftp_A 137 --QVRVRGYISCVLG-----CPYDGD----VDPRQVAW----VARELQQMGCYEVSLGDTIGVGTAGATRRLIEAVASEV 201 (302)
T ss_dssp --TCEEEEEEECTTC-----BTTTBC----CCHHHHHH----HHHHHHHTTCSEEEEEESSSCCCHHHHHHHHHHHTTTS
T ss_pred --CCeEEEEEEEEee-----CCcCCC----CCHHHHHH----HHHHHHHcCCCEEEEeCCCCCcCHHHHHHHHHHHHHhC
Confidence 2456667765321 133332 45555444 55667789999997653 235777778888777643
Q ss_pred CCccEEEEEEEcCCCcccCCCcHHHHHHHhhc
Q 021144 208 ITIPAWFSFNSKDGINVVSGDSILECASIADS 239 (317)
Q Consensus 208 ~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~ 239 (317)
+++| ++|-+.++ .|..++.+...+..
T Consensus 202 ~~~~--l~~H~Hn~----~Gla~An~laAv~a 227 (302)
T 2ftp_A 202 PRER--LAGHFHDT----YGQALANIYASLLE 227 (302)
T ss_dssp CGGG--EEEEEBCT----TSCHHHHHHHHHHT
T ss_pred CCCe--EEEEeCCC----ccHHHHHHHHHHHh
Confidence 2345 45655544 58888888887764
No 46
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=91.81 E-value=3.5 Score=38.21 Aligned_cols=131 Identities=16% Similarity=0.157 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHHHHHhCCCCEEEeccCC-C-----------------HHHHHHHHHHHHHhCCCccEEEEEEEcCCCcc
Q 021144 163 LETLKEFHRRRVLILANSGADLIAFETIP-N-----------------KLEAKAYAELLEEEGITIPAWFSFNSKDGINV 224 (317)
Q Consensus 163 ~~el~~~h~~qi~~l~~~gvD~l~~ET~p-~-----------------~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l 224 (317)
.+.+.++|+++++ .|+.+++.|.+. + +...+.+.+++.+.+ .++++++.= .|+.
T Consensus 38 ~~~~~~~y~~rA~----gG~gliite~~~v~~~g~~~~~~~~i~~d~~~~~~~~~~~~vh~~g--~~i~~QL~h--~Gr~ 109 (338)
T 1z41_A 38 TPFHMAHYISRAI----GQVGLIIVEASAVNPQGRITDQDLGIWSDEHIEGFAKLTEQVKEQG--SKIGIQLAH--AGRK 109 (338)
T ss_dssp CHHHHHHHHHHHH----TTCSEEEEEEEESSGGGCSSTTSCBCSSTHHHHHHHHHHHHHHHTT--CEEEEEEEC--CGGG
T ss_pred CHHHHHHHHHHHc----CCCCEEEeCCeeccccccCCCCCcccCCHHHHHHHHHHHHHHHhcC--CEEEEEecC--CCcc
Confidence 3678888887764 789999999541 1 122455666677765 688888742 1111
Q ss_pred c------------------------CCC-------cHHHHHHHhhcCCCceEEEEcCCC---------h-----------
Q 021144 225 V------------------------SGD-------SILECASIADSCEQVVAVGINCTS---------P----------- 253 (317)
Q Consensus 225 ~------------------------~G~-------~l~~a~~~~~~~~~~~aiGvNC~~---------p----------- 253 (317)
. +-+ .+.++++.+.+ .+.++|=|||.+ |
T Consensus 110 ~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~~i~~~~~aA~~a~~-aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGG 188 (338)
T 1z41_A 110 AELEGDIFAPSAIAFDEQSATPVEMSAEKVKETVQEFKQAAARAKE-AGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGG 188 (338)
T ss_dssp CCCSSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHH-TTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSS
T ss_pred cCCCCCCcCCCCCCCCCCCCCCccCCHHHHHHHHHHHHHHHHHHHH-cCCCEEEeccccchHHHHccCCCcCCcCcccCc
Confidence 0 001 13344554544 589999999864 2
Q ss_pred ------hhhHHHHHHHHhhCCCcEEEEeCCCCccccccccccccCCCChhhHHHHHHHHHHccc
Q 021144 254 ------RFIHGLILSVRKVTSKPVIIYPNSGETYNAELKKWVVSFSLHFFPLELILNPFASCRL 311 (317)
Q Consensus 254 ------~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~w~~~~~~~~~~~~~~~~~w~~~~~ 311 (317)
..+..+++.+++..+.|++|.-+..+..+ . ..+.++..+.++.+.+.|+
T Consensus 189 slenr~r~~~eiv~avr~~v~~pv~vris~~~~~~---~------g~~~~~~~~~a~~l~~~Gv 243 (338)
T 1z41_A 189 SPENRYRFLREIIDEVKQVWDGPLFVRVSASDYTD---K------GLDIADHIGFAKWMKEQGV 243 (338)
T ss_dssp SHHHHHHHHHHHHHHHHHHCCSCEEEEEECCCCST---T------SCCHHHHHHHHHHHHHTTC
T ss_pred chhhhHHHHHHHHHHHHHHcCCcEEEEecCcccCC---C------CCCHHHHHHHHHHHHHcCC
Confidence 23567777887777899998877643211 1 2346667778888877773
No 47
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=91.38 E-value=1.7 Score=41.04 Aligned_cols=124 Identities=13% Similarity=0.164 Sum_probs=80.7
Q ss_pred HHHHHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEc
Q 021144 170 HRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGIN 249 (317)
Q Consensus 170 h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvN 249 (317)
-..|+..|.++|+|++=+ |+|+.++++++-. +++.. ++|+++-+.|+. .-+...++ .+++.+=||
T Consensus 48 tv~Qi~~l~~aG~diVRv-avp~~~~a~al~~-I~~~~-~vPlvaDiHf~~----------~lal~a~e--~G~dklRIN 112 (366)
T 3noy_A 48 TLNQIKRLYEAGCEIVRV-AVPHKEDVEALEE-IVKKS-PMPVIADIHFAP----------SYAFLSME--KGVHGIRIN 112 (366)
T ss_dssp HHHHHHHHHHTTCCEEEE-ECCSHHHHHHHHH-HHHHC-SSCEEEECCSCH----------HHHHHHHH--TTCSEEEEC
T ss_pred HHHHHHHHHHcCCCEEEe-CCCChHHHHHHHH-HHhcC-CCCEEEeCCCCH----------HHHHHHHH--hCCCeEEEC
Confidence 345899999999999987 8999877666555 54443 599998876632 22334444 367888888
Q ss_pred CC---ChhhhHHHHHHHHhhCCCcEEEEeCCCCccccccccccccC-CCChhhHHHHHHHHH----Hccccc
Q 021144 250 CT---SPRFIHGLILSVRKVTSKPVIIYPNSGETYNAELKKWVVSF-SLHFFPLELILNPFA----SCRLIS 313 (317)
Q Consensus 250 C~---~p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~w~~~~-~~~~~~~~~~~~~w~----~~~~~~ 313 (317)
=. ..+.+..+++..++. ++|+-+=-|+|-.-+ .....| ..+|+.+.+.+.+++ +.||=+
T Consensus 113 PGNig~~~~~~~vv~~ak~~-~~piRIGvN~GSL~~----~ll~~yg~~~~eamVeSAl~~~~~~e~~gf~~ 179 (366)
T 3noy_A 113 PGNIGKEEIVREIVEEAKRR-GVAVRIGVNSGSLEK----DLLEKYGYPSAEALAESALRWSEKFEKWGFTN 179 (366)
T ss_dssp HHHHSCHHHHHHHHHHHHHH-TCEEEEEEEGGGCCH----HHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CcccCchhHHHHHHHHHHHc-CCCEEEecCCcCCCH----HHHHhcCCCCHHHHHHHHHHHHHHHHhCCCCe
Confidence 64 345567777776665 799999999994311 111112 246777777665554 445533
No 48
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=90.90 E-value=2.1 Score=40.46 Aligned_cols=103 Identities=20% Similarity=0.074 Sum_probs=65.5
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEe-----ccCC-CHHHHHHHHHHHHH-hCCCccEEEEEEEcCCCcccCCCcHHHH
Q 021144 161 VSLETLKEFHRRRVLILANSGADLIAF-----ETIP-NKLEAKAYAELLEE-EGITIPAWFSFNSKDGINVVSGDSILEC 233 (317)
Q Consensus 161 ~s~~el~~~h~~qi~~l~~~gvD~l~~-----ET~p-~~~Ea~a~~~~~~~-~~~~~pv~iSf~~~~~~~l~~G~~l~~a 233 (317)
++.+.+ +..++.+++.|||.|++ |... +.+|-+.+++.+.+ .+..+||++.. .+.+..++
T Consensus 77 ID~~al----~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGv---------g~~st~ea 143 (360)
T 4dpp_A 77 FDLEAY----DDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNT---------GSNSTREA 143 (360)
T ss_dssp BCHHHH----HHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEEC---------CCSSHHHH
T ss_pred cCHHHH----HHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEEec---------CCCCHHHH
Confidence 666554 44677788899999877 4222 57777777776554 33468999766 23456666
Q ss_pred HHHhhc--CCCceEEEEcCC-----ChhhhHHHHHHHHhhCCCcEEEEeCCC
Q 021144 234 ASIADS--CEQVVAVGINCT-----SPRFIHGLILSVRKVTSKPVIIYPNSG 278 (317)
Q Consensus 234 ~~~~~~--~~~~~aiGvNC~-----~p~~~~~~l~~l~~~~~~pl~vyPNaG 278 (317)
++..+. ..+++++.+-.- +.+.+....+.+.+. .|+++|=+-+
T Consensus 144 i~la~~A~~~Gadavlvv~PyY~k~sq~gl~~hf~~IA~a--~PiilYNiP~ 193 (360)
T 4dpp_A 144 IHATEQGFAVGMHAALHINPYYGKTSIEGLIAHFQSVLHM--GPTIIYNVPG 193 (360)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHTTGGG--SCEEEEECHH
T ss_pred HHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHh--CCEEEEeCCc
Confidence 655432 257888877652 234455555555553 6999997654
No 49
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=90.83 E-value=2 Score=39.64 Aligned_cols=119 Identities=15% Similarity=0.177 Sum_probs=69.1
Q ss_pred HHHhCCCCEEEeccCCCH---------------------------HHHHHHHHHHHHhCCCccEEEEEEEcCCCcccC-C
Q 021144 176 ILANSGADLIAFETIPNK---------------------------LEAKAYAELLEEEGITIPAWFSFNSKDGINVVS-G 227 (317)
Q Consensus 176 ~l~~~gvD~l~~ET~p~~---------------------------~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~-G 227 (317)
.+.+.|+.++..||++-- ...+..++.+++...+.|+.+++.......+.. =
T Consensus 73 ~~a~~G~g~i~~~~~~~~~~~g~~~pr~~~~~~d~~~in~~g~~~~g~~~~~~~~~~~~~~~~~~v~i~~~~~~~i~~~~ 152 (336)
T 1f76_A 73 ALGAMGFGSIEIGTVTPRPQPGNDKPRLFRLVDAEGLINRMGFNNLGVDNLVENVKKAHYDGVLGINIGKNKDTPVEQGK 152 (336)
T ss_dssp HHHHTTCSEEEEEEECSSCBCCSCSCCEEEETTTTEEEECCCCCBCCHHHHHHHHHHCCCCSEEEEEECCCTTSCGGGTH
T ss_pred HHHHcCccEEEeCCCCCCCCCCCCCcceeeccccceeeecCCCCCcCHHHHHHHHHhcccCCcEEEEecCCCCCcccccH
Confidence 455789999988887521 112444555555433468888884322111100 1
Q ss_pred CcHHHHHHHhhcCCCceEEEEcCCChh-----------hhHHHHHHHHhhC---------CCcEEEEeCCCCcccccccc
Q 021144 228 DSILECASIADSCEQVVAVGINCTSPR-----------FIHGLILSVRKVT---------SKPVIIYPNSGETYNAELKK 287 (317)
Q Consensus 228 ~~l~~a~~~~~~~~~~~aiGvNC~~p~-----------~~~~~l~~l~~~~---------~~pl~vyPNaG~~~d~~~~~ 287 (317)
..+.++++.+.. ++++|-+|+.+|. .+..+++.+++.. +.|++|.=+.+
T Consensus 153 ~~~~~aa~~~~~--g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~--------- 221 (336)
T 1f76_A 153 DDYLICMEKIYA--YAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPD--------- 221 (336)
T ss_dssp HHHHHHHHHHGG--GCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSC---------
T ss_pred HHHHHHHHHHhc--cCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCC---------
Confidence 123344444432 6889999997653 2346777777665 78999875432
Q ss_pred ccccCCCChhhHHHHHHHHHHccc
Q 021144 288 WVVSFSLHFFPLELILNPFASCRL 311 (317)
Q Consensus 288 w~~~~~~~~~~~~~~~~~w~~~~~ 311 (317)
.+.++..+.++...+.|+
T Consensus 222 ------~~~~~~~~~a~~l~~~Gv 239 (336)
T 1f76_A 222 ------LSEEELIQVADSLVRHNI 239 (336)
T ss_dssp ------CCHHHHHHHHHHHHHTTC
T ss_pred ------CCHHHHHHHHHHHHHcCC
Confidence 234556667777777773
No 50
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=90.34 E-value=1.6 Score=39.70 Aligned_cols=111 Identities=9% Similarity=0.067 Sum_probs=69.3
Q ss_pred HHHHhCCCCEEEeccCCCHH-------------------------HHHHHHHHHHHh-C-CCccEEEEEEEcCCCcccCC
Q 021144 175 LILANSGADLIAFETIPNKL-------------------------EAKAYAELLEEE-G-ITIPAWFSFNSKDGINVVSG 227 (317)
Q Consensus 175 ~~l~~~gvD~l~~ET~p~~~-------------------------Ea~a~~~~~~~~-~-~~~pv~iSf~~~~~~~l~~G 227 (317)
+.+.+.|+.++..+|++... .....++.+++. . .+.|+++++. |
T Consensus 32 ~~~~~~G~g~v~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g~~~~~~~~~~~~~~~~~p~~~~i~---------g 102 (314)
T 2e6f_A 32 RCMTASSSGALVSKSCTSAPRDGNPEPRYMAFPLGSINSMGLPNLGFDFYLKYASDLHDYSKKPLFLSIS---------G 102 (314)
T ss_dssp HHHHHSSCSCEECCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSCHHHHHHHHHHTCCTTTCCEEEEEC---------C
T ss_pred HHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCcCHHHHHHHHHHHhhcCCCcEEEEeC---------C
Confidence 34567899998887754221 122333334432 1 3589999883 4
Q ss_pred CcHH---HHHHHhhcCCCce---EEEEcCCCh------------hhhHHHHHHHHhhCCCcEEEEeCCCCcccccccccc
Q 021144 228 DSIL---ECASIADSCEQVV---AVGINCTSP------------RFIHGLILSVRKVTSKPVIIYPNSGETYNAELKKWV 289 (317)
Q Consensus 228 ~~l~---~a~~~~~~~~~~~---aiGvNC~~p------------~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~w~ 289 (317)
.+++ ++++.+.+ .+++ +|=+|+++| +.+..+++.+++..+.|+++.-..+
T Consensus 103 ~~~~~~~~~a~~~~~-~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~~~Pv~vK~~~~----------- 170 (314)
T 2e6f_A 103 LSVEENVAMVRRLAP-VAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAYGLPFGVKMPPY----------- 170 (314)
T ss_dssp SSHHHHHHHHHHHHH-HHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHHCSCEEEEECCC-----------
T ss_pred CCHHHHHHHHHHHHH-hCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhcCCCEEEEECCC-----------
Confidence 4444 44444544 3678 888988743 4566788888887789998874332
Q ss_pred ccCCCChhhHHHHHHHHHHcc
Q 021144 290 VSFSLHFFPLELILNPFASCR 310 (317)
Q Consensus 290 ~~~~~~~~~~~~~~~~w~~~~ 310 (317)
.+.+++.++++...++|
T Consensus 171 ----~~~~~~~~~a~~~~~aG 187 (314)
T 2e6f_A 171 ----FDIAHFDTAAAVLNEFP 187 (314)
T ss_dssp ----CCHHHHHHHHHHHHTCT
T ss_pred ----CCHHHHHHHHHHHHhcC
Confidence 13456777777777877
No 51
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=89.91 E-value=1.9 Score=39.22 Aligned_cols=78 Identities=14% Similarity=0.156 Sum_probs=51.6
Q ss_pred CccEEEEEEEcCCCcccCCCcHH---HHHHHhhcCCCce-EEEEcCC------------ChhhhHHHHHHHHhhCCCcEE
Q 021144 209 TIPAWFSFNSKDGINVVSGDSIL---ECASIADSCEQVV-AVGINCT------------SPRFIHGLILSVRKVTSKPVI 272 (317)
Q Consensus 209 ~~pv~iSf~~~~~~~l~~G~~l~---~a~~~~~~~~~~~-aiGvNC~------------~p~~~~~~l~~l~~~~~~pl~ 272 (317)
+.|+++++. |.+++ ++++.+.+ .+++ +|=+|++ .|+.+.++++.+++..++|++
T Consensus 93 ~~p~~~~i~---------g~~~~~~~~~a~~~~~-~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~~~Pv~ 162 (311)
T 1jub_A 93 EGPIFFSIA---------GMSAAENIAMLKKIQE-SDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFFTKPLG 162 (311)
T ss_dssp SSCCEEEEC---------CSSHHHHHHHHHHHHH-SCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTCCSCEE
T ss_pred CCCEEEEcC---------CCCHHHHHHHHHHHHh-cCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhcCCCEE
Confidence 589999883 44444 45555554 4678 8888886 344567788888888889998
Q ss_pred EEeCCCCccccccccccccCCCChhhHHHHHHHHHHccc
Q 021144 273 IYPNSGETYNAELKKWVVSFSLHFFPLELILNPFASCRL 311 (317)
Q Consensus 273 vyPNaG~~~d~~~~~w~~~~~~~~~~~~~~~~~w~~~~~ 311 (317)
+.=..+ .+.+++.++++...++|+
T Consensus 163 vKi~~~---------------~~~~~~~~~a~~~~~~G~ 186 (311)
T 1jub_A 163 VKLPPY---------------FDLVHFDIMAEILNQFPL 186 (311)
T ss_dssp EEECCC---------------CSHHHHHHHHHHHTTSCC
T ss_pred EEECCC---------------CCHHHHHHHHHHHHHcCC
Confidence 864432 124456666777777774
No 52
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A
Probab=89.55 E-value=12 Score=36.00 Aligned_cols=34 Identities=35% Similarity=0.370 Sum_probs=30.3
Q ss_pred HHHHHHHhCCCCEEEeccC-CCHHHHHHHHHHHHHh
Q 021144 172 RRVLILANSGADLIAFETI-PNKLEAKAYAELLEEE 206 (317)
Q Consensus 172 ~qi~~l~~~gvD~l~~ET~-p~~~Ea~a~~~~~~~~ 206 (317)
+|+.++.+ |+|+|++|+. |+++|++.+++.++..
T Consensus 275 ~Ra~AY~~-GAD~if~E~~~~~~~ei~~f~~~v~~~ 309 (435)
T 3lg3_A 275 SRGLAYAP-YADLVWCETSTPDLALAKRFADAVHAQ 309 (435)
T ss_dssp HHHHHHGG-GCSEEEECCSSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHc-cCCEEEecCCCCCHHHHHHHHHHhccc
Confidence 47888998 9999999996 7999999999999864
No 53
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=89.47 E-value=0.33 Score=45.18 Aligned_cols=45 Identities=22% Similarity=0.054 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEE
Q 021144 168 EFHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFN 217 (317)
Q Consensus 168 ~~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~ 217 (317)
+.-.+|++++.++|+|.|++|.+|+.+|++.+.+.+ ++|+.+.++
T Consensus 189 ~~ai~Ra~Ay~eAGAd~i~~e~~~~~e~~~~i~~~l-----~~P~lan~~ 233 (318)
T 1zlp_A 189 EEGIRRANLYKEAGADATFVEAPANVDELKEVSAKT-----KGLRIANMI 233 (318)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCCCSHHHHHHHHHHS-----CSEEEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHhc-----CCCEEEEec
Confidence 344558999999999999999999999999887654 278876553
No 54
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=89.46 E-value=4.4 Score=39.17 Aligned_cols=34 Identities=41% Similarity=0.393 Sum_probs=30.2
Q ss_pred HHHHHHHhCCCCEEEecc-CCCHHHHHHHHHHHHHh
Q 021144 172 RRVLILANSGADLIAFET-IPNKLEAKAYAELLEEE 206 (317)
Q Consensus 172 ~qi~~l~~~gvD~l~~ET-~p~~~Ea~a~~~~~~~~ 206 (317)
+|+.++.+ |+|+|++|+ .++++|++.+++.+++.
T Consensus 275 ~Ra~AY~~-GAD~if~E~~~~~~eei~~f~~~v~~~ 309 (439)
T 3i4e_A 275 SRGLAYAP-YADLIWCETGKPDLEYAKKFAEAIHKQ 309 (439)
T ss_dssp HHHHHHTT-TCSEEEECCSSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHh-hCCEEEecCCCCCHHHHHHHHHHhccc
Confidence 47888888 999999999 68999999999999863
No 55
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=89.44 E-value=2.1 Score=38.86 Aligned_cols=99 Identities=14% Similarity=0.062 Sum_probs=64.5
Q ss_pred HHHHHhCCCCEEEecc-CC--------------CHHHHHHHHHHHHHhCCCccEE--EE--EEEcCCCcccCCCcHHHHH
Q 021144 174 VLILANSGADLIAFET-IP--------------NKLEAKAYAELLEEEGITIPAW--FS--FNSKDGINVVSGDSILECA 234 (317)
Q Consensus 174 i~~l~~~gvD~l~~ET-~p--------------~~~Ea~a~~~~~~~~~~~~pv~--iS--f~~~~~~~l~~G~~l~~a~ 234 (317)
++...++|+|.+.+-. .+ +++.++.+++.+++.+ ++|- ++ |.+++.++ ++++.++
T Consensus 85 i~~a~~~G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G--~~V~~~l~~~~~~e~~~~----~~~~~~~ 158 (295)
T 1ydn_A 85 YEAAAAAHADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDG--LAIRGYVSCVVECPYDGP----VTPQAVA 158 (295)
T ss_dssp HHHHHHTTCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTT--CEEEEEEECSSEETTTEE----CCHHHHH
T ss_pred HHHHHHCCCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcC--CeEEEEEEEEecCCcCCC----CCHHHHH
Confidence 4556678999887753 22 4455566678888876 5554 44 33444332 3455555
Q ss_pred HHhh---cCCCceEEEEc----CCChhhhHHHHHHHHhhCC-CcEEEEe--CCCC
Q 021144 235 SIAD---SCEQVVAVGIN----CTSPRFIHGLILSVRKVTS-KPVIIYP--NSGE 279 (317)
Q Consensus 235 ~~~~---~~~~~~aiGvN----C~~p~~~~~~l~~l~~~~~-~pl~vyP--NaG~ 279 (317)
+.++ + .+++.|.+. ...|..+..+++.+++..+ .||.+.. +.|.
T Consensus 159 ~~~~~~~~-~G~d~i~l~Dt~G~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gl 212 (295)
T 1ydn_A 159 SVTEQLFS-LGCHEVSLGDTIGRGTPDTVAAMLDAVLAIAPAHSLAGHYHDTGGR 212 (295)
T ss_dssp HHHHHHHH-HTCSEEEEEETTSCCCHHHHHHHHHHHHTTSCGGGEEEEEBCTTSC
T ss_pred HHHHHHHh-cCCCEEEecCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCcch
Confidence 4443 4 466666554 2359999999999998876 7899998 7774
No 56
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=89.29 E-value=4.7 Score=37.08 Aligned_cols=84 Identities=13% Similarity=0.073 Sum_probs=52.0
Q ss_pred HHHHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcC
Q 021144 171 RRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINC 250 (317)
Q Consensus 171 ~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC 250 (317)
-+|++++.++|+|.|++|-+.+.+|++.+++.+. ++|+.+.+.. .+.+ ...++.+..+ .++.-|-.-+
T Consensus 173 i~Ra~ay~eAGAD~ifi~g~~~~~ei~~~~~~~~----~~Pl~~n~~~--~g~~-p~~~~~eL~~-----lGv~~v~~~~ 240 (302)
T 3fa4_A 173 VARLRAARDAGADVGFLEGITSREMARQVIQDLA----GWPLLLNMVE--HGAT-PSISAAEAKE-----MGFRIIIFPF 240 (302)
T ss_dssp HHHHHHHHTTTCSEEEETTCCCHHHHHHHHHHTT----TSCEEEECCT--TSSS-CCCCHHHHHH-----HTCSEEEETT
T ss_pred HHHHHHHHHcCCCEEeecCCCCHHHHHHHHHHhc----CCceeEEEec--CCCC-CCCCHHHHHH-----cCCCEEEEch
Confidence 4589999999999999999999999988877654 3788766532 2222 1234444332 2443333333
Q ss_pred CC----hhhhHHHHHHHHhh
Q 021144 251 TS----PRFIHGLILSVRKV 266 (317)
Q Consensus 251 ~~----p~~~~~~l~~l~~~ 266 (317)
+. -..+...++.|++.
T Consensus 241 ~~~raa~~A~~~~~~~i~~~ 260 (302)
T 3fa4_A 241 AALGPAVAAMREAMEKLKRD 260 (302)
T ss_dssp TTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHc
Confidence 32 24456666666654
No 57
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=89.26 E-value=3 Score=39.42 Aligned_cols=66 Identities=12% Similarity=0.064 Sum_probs=44.2
Q ss_pred HHHHHHHHhCCCCEEEeccCC-CHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEE
Q 021144 171 RRRVLILANSGADLIAFETIP-NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGI 248 (317)
Q Consensus 171 ~~qi~~l~~~gvD~l~~ET~p-~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGv 248 (317)
.++++.++++|||+|.+.|-. +..+....++.+++..++.|+++.. ..+.+++....+ .++++|.+
T Consensus 110 ~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~ik~~~p~v~Vi~G~----------v~t~e~A~~a~~--aGAD~I~v 176 (366)
T 4fo4_A 110 EERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGN----------VATAEGARALIE--AGVSAVKV 176 (366)
T ss_dssp HHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCEEEEEE----------ECSHHHHHHHHH--HTCSEEEE
T ss_pred HHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHhcCCCceEeee----------eCCHHHHHHHHH--cCCCEEEE
Confidence 457888999999999987753 2345555566677654468887632 235666666554 37788877
No 58
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=89.12 E-value=0.35 Score=44.51 Aligned_cols=84 Identities=13% Similarity=0.059 Sum_probs=52.4
Q ss_pred HHHHHHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEE
Q 021144 169 FHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGI 248 (317)
Q Consensus 169 ~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGv 248 (317)
.-.+|++++.++|+|+|++|.+|+.++++.+.+.+. +|+++.++. .+.. ...+.. .+.+ .++..|-+
T Consensus 168 ~ai~ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~~-----iP~~~N~~~--~g~~-p~~~~~----eL~~-~G~~~v~~ 234 (295)
T 1xg4_A 168 AAIERAQAYVEAGAEMLFPEAITELAMYRQFADAVQ-----VPILANITE--FGAT-PLFTTD----ELRS-AHVAMALY 234 (295)
T ss_dssp HHHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHHHC-----SCBEEECCS--SSSS-CCCCHH----HHHH-TTCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHcC-----CCEEEEecc--cCCC-CCCCHH----HHHH-cCCCEEEE
Confidence 344588999999999999999999999998887653 788765532 1111 122333 3333 46555555
Q ss_pred cCCCh----hhhHHHHHHHHh
Q 021144 249 NCTSP----RFIHGLILSVRK 265 (317)
Q Consensus 249 NC~~p----~~~~~~l~~l~~ 265 (317)
-.+.. ..|..+++.+++
T Consensus 235 ~~~~~~aa~~a~~~~~~~i~~ 255 (295)
T 1xg4_A 235 PLSAFRAMNRAAEHVYNVLRQ 255 (295)
T ss_dssp SSHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHH
Confidence 44322 334455555554
No 59
>1f8m_A Isocitrate lyase, ICL; alpha-beta barrel, helix-swapping, closed conformation, bromopyuvate modification, structural genomics; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.1.12.7 PDB: 1f61_A 1f8i_A
Probab=89.07 E-value=3.5 Score=39.78 Aligned_cols=33 Identities=33% Similarity=0.381 Sum_probs=29.7
Q ss_pred HHHHHHHhCCCCEEEecc-CCCHHHHHHHHHHHHH
Q 021144 172 RRVLILANSGADLIAFET-IPNKLEAKAYAELLEE 205 (317)
Q Consensus 172 ~qi~~l~~~gvD~l~~ET-~p~~~Ea~a~~~~~~~ 205 (317)
+|+.++.+ |+|+|++|| .|+.+|++.+++.++.
T Consensus 271 ~Ra~AYa~-gAD~if~e~~~~~~eei~~f~~~v~~ 304 (429)
T 1f8m_A 271 ARAKAYAP-FADLIWMETGTPDLEAARQFSEAVKA 304 (429)
T ss_dssp HHHHHHGG-GCSEEEECCSSCCHHHHHHHHHHHHT
T ss_pred HHHHHHHh-cCCEEEeCCCCCCHHHHHHHHHHhcc
Confidence 47888888 899999998 8999999999999885
No 60
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=88.91 E-value=1.1 Score=39.54 Aligned_cols=89 Identities=15% Similarity=0.129 Sum_probs=56.3
Q ss_pred HHHHHHHhCCCCEEEeccCC--CHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEc
Q 021144 172 RRVLILANSGADLIAFETIP--NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGIN 249 (317)
Q Consensus 172 ~qi~~l~~~gvD~l~~ET~p--~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvN 249 (317)
++++.+.+.|+|++++-+-- +..+++.+++.+++.+ ++++++. .+++++.+..+ .+++.||+|
T Consensus 92 ~~i~~~~~~Gad~V~l~~~~~~~p~~l~~~i~~~~~~g--~~v~~~v-----------~t~eea~~a~~--~Gad~Ig~~ 156 (232)
T 3igs_A 92 DDVDALAQAGAAIIAVDGTARQRPVAVEALLARIHHHH--LLTMADC-----------SSVDDGLACQR--LGADIIGTT 156 (232)
T ss_dssp HHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHTT--CEEEEEC-----------CSHHHHHHHHH--TTCSEEECT
T ss_pred HHHHHHHHcCCCEEEECccccCCHHHHHHHHHHHHHCC--CEEEEeC-----------CCHHHHHHHHh--CCCCEEEEc
Confidence 45666778999999887642 2345667777777754 7777643 24566655444 488999976
Q ss_pred CCC-------hhhhHHHHHHHHhhCCCcEEEEeCCC
Q 021144 250 CTS-------PRFIHGLILSVRKVTSKPVIIYPNSG 278 (317)
Q Consensus 250 C~~-------p~~~~~~l~~l~~~~~~pl~vyPNaG 278 (317)
-.+ ...-..+++++++. +.|++ .++|
T Consensus 157 ~~g~t~~~~~~~~~~~~i~~l~~~-~ipvI--A~GG 189 (232)
T 3igs_A 157 MSGYTTPDTPEEPDLPLVKALHDA-GCRVI--AEGR 189 (232)
T ss_dssp TTTSSSSSCCSSCCHHHHHHHHHT-TCCEE--EESC
T ss_pred CccCCCCCCCCCCCHHHHHHHHhc-CCcEE--EECC
Confidence 321 11123567777766 77765 5555
No 61
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=88.81 E-value=1.4 Score=42.24 Aligned_cols=49 Identities=27% Similarity=0.454 Sum_probs=38.1
Q ss_pred HHHHHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHH---hCCCccEEEEEEEc
Q 021144 170 HRRRVLILANSGADLIAFETIPNKLEAKAYAELLEE---EGITIPAWFSFNSK 219 (317)
Q Consensus 170 h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~---~~~~~pv~iSf~~~ 219 (317)
-..|+..|.++|+|++-+ |+|+.++++++-+..++ .+.++|++.-|.|+
T Consensus 40 Tv~QI~~L~~aG~eiVRv-aVp~~~~A~al~~I~~~l~~~~~~vPLVADiHF~ 91 (406)
T 4g9p_A 40 TTAQVLELHRAGSEIVRL-TVNDEEAAKAVPEIKRRLLAEGVEVPLVGDFHFN 91 (406)
T ss_dssp HHHHHHHHHHHTCSEEEE-ECCSHHHHHHHHHHHHHHHHTTCCCCEEEECCSS
T ss_pred HHHHHHHHHHcCCCEEEE-ecCCHHHHHhHHHHHHHHHhcCCCCceEeeeccc
Confidence 345899999999999986 69999998887654333 34579999888774
No 62
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=88.81 E-value=5.2 Score=36.29 Aligned_cols=115 Identities=21% Similarity=0.213 Sum_probs=66.2
Q ss_pred CeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccE
Q 021144 133 PVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPA 212 (317)
Q Consensus 133 ~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv 212 (317)
.++|.++++ +|. |. .+.++..+. +..|.++|++.+-+|-- .|+...++++.+.+ .||
T Consensus 78 ~~~vvaD~p-fgs-----------y~--~s~~~a~~n----a~rl~kaGa~aVklEdg---~e~~~~I~al~~ag--IpV 134 (275)
T 1o66_A 78 NAMIVSDLP-FGA-----------YQ--QSKEQAFAA----AAELMAAGAHMVKLEGG---VWMAETTEFLQMRG--IPV 134 (275)
T ss_dssp SSEEEEECC-TTS-----------SS--SCHHHHHHH----HHHHHHTTCSEEEEECS---GGGHHHHHHHHHTT--CCE
T ss_pred CCeEEEECC-CCC-----------cc--CCHHHHHHH----HHHHHHcCCcEEEECCc---HHHHHHHHHHHHcC--CCe
Confidence 356668764 443 32 255554432 33466699999999965 45666666777765 899
Q ss_pred EEEEEEcCC------CcccCCCc--HHHHHHHhh--cCCCceEEEEcCCChhhhHHHHHHHHhhCCCcEEEE
Q 021144 213 WFSFNSKDG------INVVSGDS--ILECASIAD--SCEQVVAVGINCTSPRFIHGLILSVRKVTSKPVIIY 274 (317)
Q Consensus 213 ~iSf~~~~~------~~l~~G~~--l~~a~~~~~--~~~~~~aiGvNC~~p~~~~~~l~~l~~~~~~pl~vy 274 (317)
+.-+-+.+. +...-|.+ .+++++.+. +..++++|=+-|... .+.+.+.+..+.|++..
T Consensus 135 ~gHiGLtPQs~~~~ggf~v~grt~~a~~~i~rA~a~~eAGA~~ivlE~vp~----~~a~~it~~l~iP~igI 202 (275)
T 1o66_A 135 CAHIGLTPQSVFAFGGYKVQGRGGKAQALLNDAKAHDDAGAAVVLMECVLA----ELAKKVTETVSCPTIGI 202 (275)
T ss_dssp EEEEESCGGGTTC-----------CHHHHHHHHHHHHHTTCSEEEEESCCH----HHHHHHHHHCSSCEEEE
T ss_pred EeeeccCceeecccCCeEEEeChHHHHHHHHHHHHHHHcCCcEEEEecCCH----HHHHHHHHhCCCCEEEE
Confidence 966654321 12122332 333333221 125899999999853 35566777778897664
No 63
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=88.70 E-value=0.4 Score=44.26 Aligned_cols=43 Identities=19% Similarity=0.342 Sum_probs=36.3
Q ss_pred HHHHHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEE
Q 021144 170 HRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFN 217 (317)
Q Consensus 170 h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~ 217 (317)
--+|++++.++|+|+|++|.+++.+|++.+++.+. .|+++.++
T Consensus 173 ai~Ra~ay~~AGAD~if~~~~~~~ee~~~~~~~~~-----~Pl~~n~~ 215 (298)
T 3eoo_A 173 AIERAIAYVEAGADMIFPEAMKTLDDYRRFKEAVK-----VPILANLT 215 (298)
T ss_dssp HHHHHHHHHHTTCSEEEECCCCSHHHHHHHHHHHC-----SCBEEECC
T ss_pred HHHHHHhhHhcCCCEEEeCCCCCHHHHHHHHHHcC-----CCeEEEec
Confidence 44589999999999999999999999998887653 78887664
No 64
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=88.64 E-value=15 Score=33.86 Aligned_cols=84 Identities=17% Similarity=0.152 Sum_probs=48.7
Q ss_pred HHHHHHhCCCCEEEec-cCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCc--HHHHHHHhhcCCCceEEEEc
Q 021144 173 RVLILANSGADLIAFE-TIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDS--ILECASIADSCEQVVAVGIN 249 (317)
Q Consensus 173 qi~~l~~~gvD~l~~E-T~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~--l~~a~~~~~~~~~~~aiGvN 249 (317)
.++.+.+.|+|.|-+. ++.++.+++.. .+ ..+.+.-.+++...|..|+. +.+.++.+-+. +...++..
T Consensus 254 ~l~~~~~~g~d~i~~d~~~~~~~~~k~~------~g--~~~~l~Gnldp~~~l~~g~~e~i~~~v~~~l~~-~g~I~~~G 324 (348)
T 4ay7_A 254 ILSDMADCGFEGLSVEEKIGSAKKGKEV------IG--TRARLVGNVSSPFTLLPGPVDKIKAEAKEALEG-GIDVLAPG 324 (348)
T ss_dssp HHHHHHTSCCSEEECCGGGCCHHHHHHH------HT--TSSEEEEEECCCCCCTTCCHHHHHHHHHHHHHT-TCSEEEES
T ss_pred HHHHHHHhccccccccchhhHHHHHHHH------hC--CCEEEEcCCCChHhhcCCCHHHHHHHHHHHHhC-CCCEEeCC
Confidence 3556778999999875 55666655432 23 23334456665556666742 33333333222 34567777
Q ss_pred CC-----ChhhhHHHHHHHHh
Q 021144 250 CT-----SPRFIHGLILSVRK 265 (317)
Q Consensus 250 C~-----~p~~~~~~l~~l~~ 265 (317)
|. .|+.+..+++..++
T Consensus 325 hgi~p~tp~env~a~v~av~e 345 (348)
T 4ay7_A 325 CGIAPMTPLENVKALVAARDE 345 (348)
T ss_dssp SSCCTTCCHHHHHHHHHHHHH
T ss_pred CccCCCCCHHHHHHHHHHHHH
Confidence 85 25777777776665
No 65
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A*
Probab=88.51 E-value=17 Score=35.08 Aligned_cols=34 Identities=32% Similarity=0.444 Sum_probs=30.4
Q ss_pred HHHHHHHhCCCCEEEeccC-CCHHHHHHHHHHHHHh
Q 021144 172 RRVLILANSGADLIAFETI-PNKLEAKAYAELLEEE 206 (317)
Q Consensus 172 ~qi~~l~~~gvD~l~~ET~-p~~~Ea~a~~~~~~~~ 206 (317)
+|..++.+ |+|+|++||. |+++|++.+++.++..
T Consensus 270 ~Ra~AY~~-GAD~If~e~~~~~~eei~~f~~~v~~~ 304 (433)
T 3eol_A 270 ARAIAYAP-YCDLIWMETSKPDLAQARRFAEAVHKA 304 (433)
T ss_dssp HHHHHHGG-GCSEEEECCSSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHh-cCCEEEEeCCCCCHHHHHHHHHHhccc
Confidence 47888998 9999999996 8999999999999864
No 66
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=88.43 E-value=8.7 Score=35.58 Aligned_cols=65 Identities=14% Similarity=0.110 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHhCCCCEEEec-cC--CCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhh
Q 021144 168 EFHRRRVLILANSGADLIAFE-TI--PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIAD 238 (317)
Q Consensus 168 ~~h~~qi~~l~~~gvD~l~~E-T~--p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~ 238 (317)
+++.+.++.+.+.|+|.|.+- |+ -...++..+++.+++.-++ +-++|-+.++ .|..+..++..+.
T Consensus 169 ~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~p~--~~i~~H~Hnd----~GlA~AN~laAv~ 236 (337)
T 3ble_A 169 DYVKSLVEHLSKEHIERIFLPDTLGVLSPEETFQGVDSLIQKYPD--IHFEFHGHND----YDLSVANSLQAIR 236 (337)
T ss_dssp HHHHHHHHHHHTSCCSEEEEECTTCCCCHHHHHHHHHHHHHHCTT--SCEEEECBCT----TSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCCCcCHHHHHHHHHHHHHhcCC--CeEEEEecCC----cchHHHHHHHHHH
Confidence 466778888999999999654 44 3688888999988875423 4457766554 3555555555554
No 67
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=88.34 E-value=11 Score=34.26 Aligned_cols=139 Identities=17% Similarity=0.086 Sum_probs=81.1
Q ss_pred ChHHHHHHHHHHHHhhccccccccccccHHHHH-hCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCC
Q 021144 53 SPHLVRKVHLDYLDAGANIIITASYQATIQGFE-AKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (317)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~TnTy~as~~~l~-~~g~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (317)
.++-++...+.-..+|.+.|... ..+|..... ..+.+.++..+..+..++.|++. +
T Consensus 78 ~~~di~~a~~~~~~ag~~~v~i~-~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~----------------------g 134 (293)
T 3ewb_X 78 VEGDIDRAEEALKDAVSPQIHIF-LATSDVHMEYKLKMSRAEVLASIKHHISYARQK----------------------F 134 (293)
T ss_dssp SHHHHHHHHHHHTTCSSEEEEEE-EECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTT----------------------C
T ss_pred CHHHHHHHHHHHhhcCCCEEEEE-ecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhC----------------------C
Confidence 34445444444444677766532 234444333 33777776666666666666532 1
Q ss_pred CCeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEec-cC--CCHHHHHHHHHHHHHhCC
Q 021144 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFE-TI--PNKLEAKAYAELLEEEGI 208 (317)
Q Consensus 132 ~~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~E-T~--p~~~Ea~a~~~~~~~~~~ 208 (317)
.. |.+++. |.+. .+. +++.+.++.+.+.|+|.|.+- |+ -...++..+++.+++.-+
T Consensus 135 ~~--v~~~~~-----------d~~~----~~~----~~~~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~ 193 (293)
T 3ewb_X 135 DV--VQFSPE-----------DATR----SDR----AFLIEAVQTAIDAGATVINIPDTVGYTNPTEFGQLFQDLRREIK 193 (293)
T ss_dssp SC--EEEEEE-----------TGGG----SCH----HHHHHHHHHHHHTTCCEEEEECSSSCCCHHHHHHHHHHHHHHCT
T ss_pred CE--EEEEec-----------cCCC----CCH----HHHHHHHHHHHHcCCCEEEecCCCCCCCHHHHHHHHHHHHHhcC
Confidence 22 333221 1111 243 355566778888999998664 43 368888899988887543
Q ss_pred Ccc-EEEEEEEcCCCcccCCCcHHHHHHHhhc
Q 021144 209 TIP-AWFSFNSKDGINVVSGDSILECASIADS 239 (317)
Q Consensus 209 ~~p-v~iSf~~~~~~~l~~G~~l~~a~~~~~~ 239 (317)
+.+ +-+++-+.++ .|..+..++..+..
T Consensus 194 ~~~~~~l~~H~Hnd----~Gla~AN~laA~~a 221 (293)
T 3ewb_X 194 QFDDIIFASHCHDD----LGMATANALAAIEN 221 (293)
T ss_dssp TGGGSEEEEECBCT----TSCHHHHHHHHHHT
T ss_pred CccCceEEEEeCCC----cChHHHHHHHHHHh
Confidence 333 7778877665 57777777777653
No 68
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=88.04 E-value=0.55 Score=43.19 Aligned_cols=43 Identities=19% Similarity=0.260 Sum_probs=35.8
Q ss_pred HHHHHHHHHhCCCCEEEecc-CCCHHHHHHHHHHHHHhCCCccEEEE
Q 021144 170 HRRRVLILANSGADLIAFET-IPNKLEAKAYAELLEEEGITIPAWFS 215 (317)
Q Consensus 170 h~~qi~~l~~~gvD~l~~ET-~p~~~Ea~a~~~~~~~~~~~~pv~iS 215 (317)
-.+|++++.++|+|.|++|+ +|+.+|++.+.+.++. .+|+++.
T Consensus 172 ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~~---~~P~i~~ 215 (295)
T 1s2w_A 172 ALKRAEAYRNAGADAILMHSKKADPSDIEAFMKAWNN---QGPVVIV 215 (295)
T ss_dssp HHHHHHHHHHTTCSEEEECCCSSSSHHHHHHHHHHTT---CSCEEEC
T ss_pred HHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHcCC---CCCEEEe
Confidence 33489999999999999998 8999999999887752 4788754
No 69
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=87.82 E-value=1.3 Score=38.97 Aligned_cols=89 Identities=19% Similarity=0.271 Sum_probs=56.4
Q ss_pred HHHHHHHhCCCCEEEeccC--CCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEc
Q 021144 172 RRVLILANSGADLIAFETI--PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGIN 249 (317)
Q Consensus 172 ~qi~~l~~~gvD~l~~ET~--p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvN 249 (317)
++++.+.++|+|++++-+- .+..+++.+++.+++.+ +++++.. .+++++....+ .+++.||+|
T Consensus 92 ~~i~~~~~aGad~I~l~~~~~~~p~~l~~~i~~~~~~g--~~v~~~v-----------~t~eea~~a~~--~Gad~Ig~~ 156 (229)
T 3q58_A 92 QDVDALAQAGADIIAFDASFRSRPVDIDSLLTRIRLHG--LLAMADC-----------STVNEGISCHQ--KGIEFIGTT 156 (229)
T ss_dssp HHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHTT--CEEEEEC-----------SSHHHHHHHHH--TTCSEEECT
T ss_pred HHHHHHHHcCCCEEEECccccCChHHHHHHHHHHHHCC--CEEEEec-----------CCHHHHHHHHh--CCCCEEEec
Confidence 4567778899999987653 23345667777777754 7777643 24666665544 489999975
Q ss_pred CCC------h-hhhHHHHHHHHhhCCCcEEEEeCCC
Q 021144 250 CTS------P-RFIHGLILSVRKVTSKPVIIYPNSG 278 (317)
Q Consensus 250 C~~------p-~~~~~~l~~l~~~~~~pl~vyPNaG 278 (317)
-.+ + ..-..+++++++. +.|++ .++|
T Consensus 157 ~~g~t~~~~~~~~~~~li~~l~~~-~ipvI--A~GG 189 (229)
T 3q58_A 157 LSGYTGPITPVEPDLAMVTQLSHA-GCRVI--AEGR 189 (229)
T ss_dssp TTTSSSSCCCSSCCHHHHHHHHTT-TCCEE--EESS
T ss_pred CccCCCCCcCCCCCHHHHHHHHHc-CCCEE--EECC
Confidence 321 1 1123667777766 77765 5555
No 70
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=87.81 E-value=3.8 Score=37.05 Aligned_cols=134 Identities=12% Similarity=0.012 Sum_probs=78.5
Q ss_pred HHHHHhhccccccccccccHHHH-HhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCCCeEEEEee
Q 021144 62 LDYLDAGANIIITASYQATIQGF-EAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSRPVLVAASV 140 (317)
Q Consensus 62 ~~Yl~AGAdiI~TnTy~as~~~l-~~~g~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~~~~~~~~~~~~Vagsi 140 (317)
+..+++|.+.|.... .+|.... ...+.+.++..+..+.+++.|++. .+-|-+.|
T Consensus 86 ~~a~~~G~~~V~i~~-~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~------------------------G~~V~~~l 140 (295)
T 1ydn_A 86 EAAAAAHADEIAVFI-SASEGFSKANINCTIAESIERLSPVIGAAIND------------------------GLAIRGYV 140 (295)
T ss_dssp HHHHHTTCSEEEEEE-ESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHT------------------------TCEEEEEE
T ss_pred HHHHHCCCCEEEEEE-ecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHc------------------------CCeEEEEE
Confidence 456789999877643 2343322 223566565556666666666532 23456666
Q ss_pred CCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEecc---CCCHHHHHHHHHHHHHhCCCccEEEEEE
Q 021144 141 GSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFET---IPNKLEAKAYAELLEEEGITIPAWFSFN 217 (317)
Q Consensus 141 GP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~ET---~p~~~Ea~a~~~~~~~~~~~~pv~iSf~ 217 (317)
+-...+ ||.+. .+.+++.+ .++.+.+.|||.|.+=+ +....+...+++.+++.-++.|+ ++-
T Consensus 141 ~~~~~~-----e~~~~----~~~~~~~~----~~~~~~~~G~d~i~l~Dt~G~~~P~~~~~lv~~l~~~~~~~~l--~~H 205 (295)
T 1ydn_A 141 SCVVEC-----PYDGP----VTPQAVAS----VTEQLFSLGCHEVSLGDTIGRGTPDTVAAMLDAVLAIAPAHSL--AGH 205 (295)
T ss_dssp ECSSEE-----TTTEE----CCHHHHHH----HHHHHHHHTCSEEEEEETTSCCCHHHHHHHHHHHHTTSCGGGE--EEE
T ss_pred EEEecC-----CcCCC----CCHHHHHH----HHHHHHhcCCCEEEecCCCCCcCHHHHHHHHHHHHHhCCCCeE--EEE
Confidence 653211 22221 35665555 44556678999997653 23677888888888864322454 455
Q ss_pred EcCCCcccCCCcHHHHHHHhhc
Q 021144 218 SKDGINVVSGDSILECASIADS 239 (317)
Q Consensus 218 ~~~~~~l~~G~~l~~a~~~~~~ 239 (317)
+.++ .|..++.+...+..
T Consensus 206 ~Hn~----~Gla~an~l~Ai~a 223 (295)
T 1ydn_A 206 YHDT----GGRALDNIRVSLEK 223 (295)
T ss_dssp EBCT----TSCHHHHHHHHHHH
T ss_pred ECCC----cchHHHHHHHHHHh
Confidence 5443 58888887777764
No 71
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=87.72 E-value=0.32 Score=45.05 Aligned_cols=42 Identities=19% Similarity=0.238 Sum_probs=34.4
Q ss_pred HHHHHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEE
Q 021144 170 HRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSF 216 (317)
Q Consensus 170 h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf 216 (317)
-.+|++++.++|+|.|++|.+++.+|++.+.+.+ +.|+++.+
T Consensus 177 ai~Ra~ay~eAGAD~i~~e~~~~~~~~~~i~~~~-----~~P~~~n~ 218 (305)
T 3ih1_A 177 AIERANAYVKAGADAIFPEALQSEEEFRLFNSKV-----NAPLLANM 218 (305)
T ss_dssp HHHHHHHHHHHTCSEEEETTCCSHHHHHHHHHHS-----CSCBEEEC
T ss_pred HHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHHc-----CCCEEEee
Confidence 3458999999999999999999999988877654 27887655
No 72
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=87.72 E-value=14 Score=33.77 Aligned_cols=93 Identities=11% Similarity=0.095 Sum_probs=56.5
Q ss_pred HHHHHhCCCCEEEeccC--CCH------HHHHHHHHHHHHhCCCccEEEEEEEcCCCccc-CCCc---HHHHHHHhhcCC
Q 021144 174 VLILANSGADLIAFETI--PNK------LEAKAYAELLEEEGITIPAWFSFNSKDGINVV-SGDS---ILECASIADSCE 241 (317)
Q Consensus 174 i~~l~~~gvD~l~~ET~--p~~------~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~-~G~~---l~~a~~~~~~~~ 241 (317)
++...+.|+|.+-+=.. ++. .+++.+.+.+++.+ +|+++-+..... .+. +..+ +.++++.+.+ .
T Consensus 114 ve~a~~~GAdaV~vlv~~~~d~~~~~~~~~i~~v~~~~~~~G--~p~lv~~~~~g~-~v~~~~~~~~~v~~aa~~a~~-l 189 (304)
T 1to3_A 114 AQAVKRDGAKALKLLVLWRSDEDAQQRLNMVKEFNELCHSNG--LLSIIEPVVRPP-RCGDKFDREQAIIDAAKELGD-S 189 (304)
T ss_dssp HHHHHHTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHTTT--CEEEEEEEECCC-SSCSCCCHHHHHHHHHHHHTT-S
T ss_pred HHHHHHcCCCEEEEEEEcCCCccHHHHHHHHHHHHHHHHHcC--CcEEEEEECCCC-ccccCCChhHHHHHHHHHHHH-c
Confidence 33455579999862211 322 45555566666655 998887654433 222 2222 5566666654 6
Q ss_pred CceEEEEcCC-----ChhhhHHHHHHHHhhCCCc
Q 021144 242 QVVAVGINCT-----SPRFIHGLILSVRKVTSKP 270 (317)
Q Consensus 242 ~~~aiGvNC~-----~p~~~~~~l~~l~~~~~~p 270 (317)
+++.+++.-. +++.+..+++.....+..|
T Consensus 190 GaD~iKv~~~~~~~g~~~~~~~vv~~~~~~~~~P 223 (304)
T 1to3_A 190 GADLYKVEMPLYGKGARSDLLTASQRLNGHINMP 223 (304)
T ss_dssp SCSEEEECCGGGGCSCHHHHHHHHHHHHHTCCSC
T ss_pred CCCEEEeCCCcCCCCCHHHHHHHHHhccccCCCC
Confidence 8999999884 4567777777666656778
No 73
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=86.95 E-value=6.1 Score=33.39 Aligned_cols=91 Identities=11% Similarity=0.147 Sum_probs=57.0
Q ss_pred HHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCCC-
Q 021144 174 VLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTS- 252 (317)
Q Consensus 174 i~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~~- 252 (317)
++.+.++|+|.+.+=..+....+..+++.+++.+ +++.+.+.. .. ++.+.++.+.+ .+++.|++|-.-
T Consensus 70 ~~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~g--~~~~v~~~~-------~~-t~~~~~~~~~~-~g~d~i~v~~g~~ 138 (211)
T 3f4w_A 70 SQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAG--KQVVVDMIC-------VD-DLPARVRLLEE-AGADMLAVHTGTD 138 (211)
T ss_dssp HHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHT--CEEEEECTT-------CS-SHHHHHHHHHH-HTCCEEEEECCHH
T ss_pred HHHHHhcCCCEEEEeCCCChhHHHHHHHHHHHcC--CeEEEEecC-------CC-CHHHHHHHHHH-cCCCEEEEcCCCc
Confidence 6677889999999988876666788888888876 677654311 12 33333444433 367778776320
Q ss_pred ----hhhhHHHHHHHHhhC-CCcEEEEe
Q 021144 253 ----PRFIHGLILSVRKVT-SKPVIIYP 275 (317)
Q Consensus 253 ----p~~~~~~l~~l~~~~-~~pl~vyP 275 (317)
+......++++++.. +.|+++-.
T Consensus 139 g~~~~~~~~~~i~~l~~~~~~~~i~~~g 166 (211)
T 3f4w_A 139 QQAAGRKPIDDLITMLKVRRKARIAVAG 166 (211)
T ss_dssp HHHTTCCSHHHHHHHHHHCSSCEEEEES
T ss_pred ccccCCCCHHHHHHHHHHcCCCcEEEEC
Confidence 111346677777764 67766543
No 74
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=86.61 E-value=10 Score=35.72 Aligned_cols=137 Identities=14% Similarity=0.082 Sum_probs=78.0
Q ss_pred ChHHHHHHHHHHHHhhccccccccccc-cHHHH-HhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCC
Q 021144 53 SPHLVRKVHLDYLDAGANIIITASYQA-TIQGF-EAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRIS 130 (317)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~TnTy~a-s~~~l-~~~g~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~~~~~~~ 130 (317)
+++-|+.....-..+|.+.|. .|-+ |.... ...+.+.++..+....+|+.|++.
T Consensus 85 ~~~di~~a~~al~~ag~~~v~--if~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~---------------------- 140 (370)
T 3rmj_A 85 IERDIRQAGEAVAPAPKKRIH--TFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREY---------------------- 140 (370)
T ss_dssp SHHHHHHHHHHHTTSSSEEEE--EEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTT----------------------
T ss_pred CHHHHHHHHHHHhhCCCCEEE--EEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHc----------------------
Confidence 455555554444447777665 4443 33322 334777766666666666655421
Q ss_pred CCCeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEec-cC--CCHHHHHHHHHHHHHhC
Q 021144 131 SRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFE-TI--PNKLEAKAYAELLEEEG 207 (317)
Q Consensus 131 ~~~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~E-T~--p~~~Ea~a~~~~~~~~~ 207 (317)
+.. |..+ + ||.+. .+. ++..+.++.+.+.|+|.|.+= |+ ....++..+++.+++.-
T Consensus 141 g~~--v~~~--~---------ed~~r----~~~----~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~ 199 (370)
T 3rmj_A 141 TDD--VEFS--C---------EDALR----SEI----DFLAEICGAVIEAGATTINIPDTVGYSIPYKTEEFFRELIAKT 199 (370)
T ss_dssp CSC--EEEE--E---------ETGGG----SCH----HHHHHHHHHHHHHTCCEEEEECSSSCCCHHHHHHHHHHHHHHS
T ss_pred CCE--EEEe--c---------CCCCc----cCH----HHHHHHHHHHHHcCCCEEEecCccCCcCHHHHHHHHHHHHHhC
Confidence 112 2221 1 11122 244 355667778888999988654 44 36888999999888753
Q ss_pred CCc-cEEEEEEEcCCCcccCCCcHHHHHHHhh
Q 021144 208 ITI-PAWFSFNSKDGINVVSGDSILECASIAD 238 (317)
Q Consensus 208 ~~~-pv~iSf~~~~~~~l~~G~~l~~a~~~~~ 238 (317)
++. .+.+++-|.++ .|..+..++..+.
T Consensus 200 ~~~~~~~l~~H~Hnd----~GlAvAN~laAv~ 227 (370)
T 3rmj_A 200 PNGGKVVWSAHCHND----LGLAVANSLAALK 227 (370)
T ss_dssp TTGGGSEEEEECBCT----TSCHHHHHHHHHH
T ss_pred CCcCceEEEEEeCCC----CChHHHHHHHHHH
Confidence 221 17788888765 3555555555554
No 75
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=86.59 E-value=4.4 Score=36.68 Aligned_cols=103 Identities=15% Similarity=0.122 Sum_probs=62.5
Q ss_pred HHHHHHHHHhCC-CCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEE
Q 021144 170 HRRRVLILANSG-ADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGI 248 (317)
Q Consensus 170 h~~qi~~l~~~g-vD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGv 248 (317)
|.+.++..++.| ||+|=+|-...-+.++.+++.+++.+ .++++|+---+ .+++-+.+.+.+..+.. .+++.+=+
T Consensus 121 ~~~ll~~~l~~g~~dyIDvEl~~~~~~~~~l~~~a~~~~--~kvI~S~Hdf~--~tP~~~el~~~~~~~~~-~GaDIvKi 195 (276)
T 3o1n_A 121 YIDLNRAAVDSGLVDMIDLELFTGDDEVKATVGYAHQHN--VAVIMSNHDFH--KTPAAEEIVQRLRKMQE-LGADIPKI 195 (276)
T ss_dssp HHHHHHHHHHHTCCSEEEEEGGGCHHHHHHHHHHHHHTT--CEEEEEEEESS--CCCCHHHHHHHHHHHHH-TTCSEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEECcCCHHHHHHHHHHHHhCC--CEEEEEeecCC--CCcCHHHHHHHHHHHHH-cCCCEEEE
Confidence 444555566667 99999997666555666776666654 89999985322 12232233344444433 46666555
Q ss_pred cCC--ChhhhHHHHHHHHh---h-CCCcEEEEeCC
Q 021144 249 NCT--SPRFIHGLILSVRK---V-TSKPVIIYPNS 277 (317)
Q Consensus 249 NC~--~p~~~~~~l~~l~~---~-~~~pl~vyPNa 277 (317)
-+. +++.+..+++.... . .+.|++.+.=+
T Consensus 196 a~~a~s~~Dvl~Ll~~~~~~~~~~~~~PlIa~~MG 230 (276)
T 3o1n_A 196 AVMPQTKADVLTLLTATVEMQERYADRPIITMSMS 230 (276)
T ss_dssp EECCSSHHHHHHHHHHHHHHHHHTCCSCCEEEECS
T ss_pred EecCCChHHHHHHHHHHHHHHhcCCCCCEEEEECC
Confidence 554 56777777664433 2 57899888554
No 76
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=86.58 E-value=5.7 Score=38.72 Aligned_cols=96 Identities=11% Similarity=0.100 Sum_probs=67.1
Q ss_pred HHHHHHhCCCCEEE-eccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHH---HHHHhhcCCCceEEEE
Q 021144 173 RVLILANSGADLIA-FETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILE---CASIADSCEQVVAVGI 248 (317)
Q Consensus 173 qi~~l~~~gvD~l~-~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~---a~~~~~~~~~~~aiGv 248 (317)
-++...++|+|.|- |-...+++.++.+++++++.+ ..+.+++++.+..+ .+++. +++.+.+ .+++.|.+
T Consensus 105 ~v~~a~~~Gvd~i~if~~~sd~~ni~~~i~~ak~~G--~~v~~~i~~~~~~~----~~~e~~~~~a~~l~~-~Gad~I~l 177 (464)
T 2nx9_A 105 FVERAVKNGMDVFRVFDAMNDVRNMQQALQAVKKMG--AHAQGTLCYTTSPV----HNLQTWVDVAQQLAE-LGVDSIAL 177 (464)
T ss_dssp HHHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHHTT--CEEEEEEECCCCTT----CCHHHHHHHHHHHHH-TTCSEEEE
T ss_pred HHHHHHhCCcCEEEEEEecCHHHHHHHHHHHHHHCC--CEEEEEEEeeeCCC----CCHHHHHHHHHHHHH-CCCCEEEE
Confidence 35567779999885 445677888888999999877 66666665544322 24444 4444444 47777777
Q ss_pred cC----CChhhhHHHHHHHHhhCCCcEEEEe
Q 021144 249 NC----TSPRFIHGLILSVRKVTSKPVIIYP 275 (317)
Q Consensus 249 NC----~~p~~~~~~l~~l~~~~~~pl~vyP 275 (317)
-= ..|..+..+++.+++..+.||.+..
T Consensus 178 ~DT~G~~~P~~v~~lv~~l~~~~~~~i~~H~ 208 (464)
T 2nx9_A 178 KDMAGILTPYAAEELVSTLKKQVDVELHLHC 208 (464)
T ss_dssp EETTSCCCHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred cCCCCCcCHHHHHHHHHHHHHhcCCeEEEEE
Confidence 42 3599999999999988788888775
No 77
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=86.24 E-value=0.58 Score=42.98 Aligned_cols=42 Identities=21% Similarity=0.200 Sum_probs=34.5
Q ss_pred HHHHHHHHhCCCCEEEecc-CCCHHHHHHHHHHHHHhCCCccEEEE
Q 021144 171 RRRVLILANSGADLIAFET-IPNKLEAKAYAELLEEEGITIPAWFS 215 (317)
Q Consensus 171 ~~qi~~l~~~gvD~l~~ET-~p~~~Ea~a~~~~~~~~~~~~pv~iS 215 (317)
.+|++++.++|+|.|++|. +|+.+|++.+.+.+. ..+|+++.
T Consensus 169 i~Ra~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~---~~vP~i~n 211 (290)
T 2hjp_A 169 VRRGQAYEEAGADAILIHSRQKTPDEILAFVKSWP---GKVPLVLV 211 (290)
T ss_dssp HHHHHHHHHTTCSEEEECCCCSSSHHHHHHHHHCC---CSSCEEEC
T ss_pred HHHHHHHHHcCCcEEEeCCCCCCHHHHHHHHHHcC---CCCCEEEe
Confidence 3488999999999999999 999999988877654 24787764
No 78
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=85.95 E-value=5 Score=37.69 Aligned_cols=78 Identities=15% Similarity=0.143 Sum_probs=51.9
Q ss_pred CccEEEEEEEcCCCcccCCCcHHH---HHHHhhc--CCCceEEEEcCCC------------hhhhHHHHHHHHhhCCCcE
Q 021144 209 TIPAWFSFNSKDGINVVSGDSILE---CASIADS--CEQVVAVGINCTS------------PRFIHGLILSVRKVTSKPV 271 (317)
Q Consensus 209 ~~pv~iSf~~~~~~~l~~G~~l~~---a~~~~~~--~~~~~aiGvNC~~------------p~~~~~~l~~l~~~~~~pl 271 (317)
+.|+++|+ .|.++++ +++.+.. ..++++|=|||++ |+.+.++++.+++.+++||
T Consensus 126 ~~pvivsI---------~G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~gg~~l~~~~e~~~~il~av~~~~~~PV 196 (354)
T 4ef8_A 126 KKPLFLSM---------SGLSMRENVEMCKRLAAVATEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEVYPHSF 196 (354)
T ss_dssp TCCEEEEE---------CCSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHHCCSCE
T ss_pred CCcEEEEe---------ccCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCCCchhhccCHHHHHHHHHHHHHhhCCCe
Confidence 58999998 2444444 4444441 1357899999973 4566778888888889999
Q ss_pred EEEeCCCCccccccccccccCCCChhhHHHHHHHHHHcc
Q 021144 272 IIYPNSGETYNAELKKWVVSFSLHFFPLELILNPFASCR 310 (317)
Q Consensus 272 ~vyPNaG~~~d~~~~~w~~~~~~~~~~~~~~~~~w~~~~ 310 (317)
+|+=-.+ .+.+++.+.+....+.|
T Consensus 197 ~vKi~p~---------------~d~~~~~~~a~~~~~~G 220 (354)
T 4ef8_A 197 GVKMPPY---------------FDFAHFDAAAEILNEFP 220 (354)
T ss_dssp EEEECCC---------------CSHHHHHHHHHHHHTCT
T ss_pred EEEecCC---------------CCHHHHHHHHHHHHhCC
Confidence 8875332 23455667776666666
No 79
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=85.54 E-value=6.3 Score=38.59 Aligned_cols=63 Identities=14% Similarity=0.106 Sum_probs=39.7
Q ss_pred HHHHHhCCCCEEEec-----c----------CCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhh
Q 021144 174 VLILANSGADLIAFE-----T----------IPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIAD 238 (317)
Q Consensus 174 i~~l~~~gvD~l~~E-----T----------~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~ 238 (317)
++.+.++|+|.|.+. . .|.+.-+..+.+++++.+ +|++.+.-+ .+..++++.+.
T Consensus 286 a~~l~~aGaD~I~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~--iPVIa~GGI---------~~~~di~kala 354 (496)
T 4fxs_A 286 ARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYG--IPVIADGGI---------RFSGDISKAIA 354 (496)
T ss_dssp HHHHHHHTCSEEEECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGGGT--CCEEEESCC---------CSHHHHHHHHH
T ss_pred HHHHHHhCCCEEEECCCCCcCcccccccCCCccHHHHHHHHHHHhccCC--CeEEEeCCC---------CCHHHHHHHHH
Confidence 566778999999874 2 455555555556555544 899966422 23456666665
Q ss_pred cCCCceEEEEc
Q 021144 239 SCEQVVAVGIN 249 (317)
Q Consensus 239 ~~~~~~aiGvN 249 (317)
.++++|.+-
T Consensus 355 --~GAd~V~iG 363 (496)
T 4fxs_A 355 --AGASCVMVG 363 (496)
T ss_dssp --TTCSEEEES
T ss_pred --cCCCeEEec
Confidence 366777665
No 80
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=85.49 E-value=1.3 Score=40.30 Aligned_cols=40 Identities=28% Similarity=0.250 Sum_probs=32.8
Q ss_pred HHHHHHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEE
Q 021144 169 FHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAW 213 (317)
Q Consensus 169 ~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~ 213 (317)
.-.+|++++.++|+|.|++|.+|+.+|++.+.+.+. +|+-
T Consensus 169 ~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~~-----~P~n 208 (275)
T 2ze3_A 169 ETVRRGQAYADAGADGIFVPLALQSQDIRALADALR-----VPLN 208 (275)
T ss_dssp HHHHHHHHHHHTTCSEEECTTCCCHHHHHHHHHHCS-----SCEE
T ss_pred HHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHhcC-----CCEE
Confidence 344589999999999999999999999998876542 6763
No 81
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=85.43 E-value=13 Score=33.43 Aligned_cols=91 Identities=16% Similarity=0.126 Sum_probs=57.2
Q ss_pred HHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCC------CcccCCCcHH---HHHHHhh--cCCCc
Q 021144 175 LILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDG------INVVSGDSIL---ECASIAD--SCEQV 243 (317)
Q Consensus 175 ~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~------~~l~~G~~l~---~a~~~~~--~~~~~ 243 (317)
..|.++|++.+-+|-- .|+...++++.+.+ .||+-.+-+.+. +...-|.+-+ ++++.+. +..++
T Consensus 101 ~rl~kaGa~aVklEgg---~e~~~~I~al~~ag--ipV~gHiGLtPq~v~~~ggf~v~grt~~~a~~~i~rA~a~~eAGA 175 (264)
T 1m3u_A 101 ATVMRAGANMVKIEGG---EWLVETVQMLTERA--VPVCGHLGLTPQSVNIFGGYKVQGRGDEAGDQLLSDALALEAAGA 175 (264)
T ss_dssp HHHHHTTCSEEECCCS---GGGHHHHHHHHHTT--CCEEEEEESCGGGHHHHTSSCCCCCSHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCEEEECCc---HHHHHHHHHHHHCC--CCeEeeecCCceeecccCCeEEEeCCHHHHHHHHHHHHHHHHCCC
Confidence 3466699999999965 45566666677665 899976655432 2333454433 2222221 12488
Q ss_pred eEEEEcCCChhhhHHHHHHHHhhCCCcEEEE
Q 021144 244 VAVGINCTSPRFIHGLILSVRKVTSKPVIIY 274 (317)
Q Consensus 244 ~aiGvNC~~p~~~~~~l~~l~~~~~~pl~vy 274 (317)
++|=+-|... .+.+.+.+..+.|++..
T Consensus 176 ~~ivlE~vp~----~~a~~it~~l~iP~igI 202 (264)
T 1m3u_A 176 QLLVLECVPV----ELAKRITEALAIPVIGI 202 (264)
T ss_dssp CEEEEESCCH----HHHHHHHHHCSSCEEEE
T ss_pred cEEEEecCCH----HHHHHHHHhCCCCEEEe
Confidence 9999999853 35566777778897654
No 82
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=85.41 E-value=4 Score=35.50 Aligned_cols=98 Identities=13% Similarity=0.146 Sum_probs=55.6
Q ss_pred HHHHHHhCCCCEEEec--cCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCC-----CcHHHHHHHhhcCCCceE
Q 021144 173 RVLILANSGADLIAFE--TIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSG-----DSILECASIADSCEQVVA 245 (317)
Q Consensus 173 qi~~l~~~gvD~l~~E--T~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G-----~~l~~a~~~~~~~~~~~a 245 (317)
+++.+.+.|+|.+.+- .+++...+ .++++..+ ..+.+++.+..+.-..+| .+..+.++.+.+ .+++.
T Consensus 89 ~~~~~l~~Gad~V~lg~~~l~~p~~~---~~~~~~~g--~~~~~~l~~~~g~v~~~g~~~~~~~~~e~~~~~~~-~G~~~ 162 (244)
T 1vzw_A 89 TLAAALATGCTRVNLGTAALETPEWV---AKVIAEHG--DKIAVGLDVRGTTLRGRGWTRDGGDLYETLDRLNK-EGCAR 162 (244)
T ss_dssp HHHHHHHTTCSEEEECHHHHHCHHHH---HHHHHHHG--GGEEEEEEEETTEECCSSSCCCCCBHHHHHHHHHH-TTCCC
T ss_pred HHHHHHHcCCCEEEECchHhhCHHHH---HHHHHHcC--CcEEEEEEccCCEEEEcCcccCCCCHHHHHHHHHh-CCCCE
Confidence 4666777899998764 44554433 34444444 456677766532111122 155556555554 46777
Q ss_pred EEEcCCChh-----hhHHHHHHHHhhCCCcEEEEeCCC
Q 021144 246 VGINCTSPR-----FIHGLILSVRKVTSKPVIIYPNSG 278 (317)
Q Consensus 246 iGvNC~~p~-----~~~~~l~~l~~~~~~pl~vyPNaG 278 (317)
|.++...+. .-...++++++..+.|+++ ++|
T Consensus 163 i~~~~~~~~~~~~g~~~~~~~~i~~~~~ipvia--~GG 198 (244)
T 1vzw_A 163 YVVTDIAKDGTLQGPNLELLKNVCAATDRPVVA--SGG 198 (244)
T ss_dssp EEEEEC-------CCCHHHHHHHHHTCSSCEEE--ESC
T ss_pred EEEeccCcccccCCCCHHHHHHHHHhcCCCEEE--ECC
Confidence 777764332 2246778888777788665 555
No 83
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=85.00 E-value=20 Score=31.73 Aligned_cols=89 Identities=16% Similarity=0.254 Sum_probs=50.7
Q ss_pred HHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCce-EEEEcC-C
Q 021144 174 VLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVV-AVGINC-T 251 (317)
Q Consensus 174 i~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~-aiGvNC-~ 251 (317)
++.+.++|+|.+++=.+| .+|+...++.+++.+ +.++ .+. .+ .++.+.+........+.. .+++.- +
T Consensus 115 ~~~~~~aG~dgvii~dl~-~ee~~~~~~~~~~~g--l~~i-~l~-~p------~t~~~rl~~ia~~a~gfiy~vs~~g~T 183 (262)
T 2ekc_A 115 CRLSREKGIDGFIVPDLP-PEEAEELKAVMKKYV--LSFV-PLG-AP------TSTRKRIKLICEAADEMTYFVSVTGTT 183 (262)
T ss_dssp HHHHHHTTCCEEECTTCC-HHHHHHHHHHHHHTT--CEEC-CEE-CT------TCCHHHHHHHHHHCSSCEEEESSCC--
T ss_pred HHHHHHcCCCEEEECCCC-HHHHHHHHHHHHHcC--CcEE-EEe-CC------CCCHHHHHHHHHhCCCCEEEEecCCcc
Confidence 556777999988886666 488888889898876 4432 221 11 133333333332222322 222221 1
Q ss_pred C-----h-hhhHHHHHHHHhhCCCcEEE
Q 021144 252 S-----P-RFIHGLILSVRKVTSKPVII 273 (317)
Q Consensus 252 ~-----p-~~~~~~l~~l~~~~~~pl~v 273 (317)
+ + ..+...++.+++.++.|+.+
T Consensus 184 G~~~~~~~~~~~~~v~~vr~~~~~pv~v 211 (262)
T 2ekc_A 184 GAREKLPYERIKKKVEEYRELCDKPVVV 211 (262)
T ss_dssp -------CHHHHHHHHHHHHHCCSCEEE
T ss_pred CCCCCcCcccHHHHHHHHHhhcCCCEEE
Confidence 1 2 44567888888888889765
No 84
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=84.69 E-value=7.3 Score=35.08 Aligned_cols=84 Identities=13% Similarity=0.118 Sum_probs=52.9
Q ss_pred HHHHHHhCCCCEEEe--ccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcC
Q 021144 173 RVLILANSGADLIAF--ETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINC 250 (317)
Q Consensus 173 qi~~l~~~gvD~l~~--ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC 250 (317)
|++.....|+|.+++ .+++ ..+++.+++.+++.+ +.+|++. .+.+++..... .+++.||+|-
T Consensus 127 qv~~A~~~GAD~VlLi~a~l~-~~~l~~l~~~a~~lG--l~~lvev-----------~t~ee~~~A~~--~Gad~IGv~~ 190 (272)
T 3qja_A 127 QIHEARAHGADMLLLIVAALE-QSVLVSMLDRTESLG--MTALVEV-----------HTEQEADRALK--AGAKVIGVNA 190 (272)
T ss_dssp HHHHHHHTTCSEEEEEGGGSC-HHHHHHHHHHHHHTT--CEEEEEE-----------SSHHHHHHHHH--HTCSEEEEES
T ss_pred HHHHHHHcCCCEEEEecccCC-HHHHHHHHHHHHHCC--CcEEEEc-----------CCHHHHHHHHH--CCCCEEEECC
Confidence 455555689999987 5555 567888888888866 7888766 24555554443 3789999995
Q ss_pred CC----hhhhHHHHHHHHhhC--CCcEEE
Q 021144 251 TS----PRFIHGLILSVRKVT--SKPVII 273 (317)
Q Consensus 251 ~~----p~~~~~~l~~l~~~~--~~pl~v 273 (317)
.. +.. ...++.+.+.. +.|+++
T Consensus 191 r~l~~~~~d-l~~~~~l~~~v~~~~pvVa 218 (272)
T 3qja_A 191 RDLMTLDVD-RDCFARIAPGLPSSVIRIA 218 (272)
T ss_dssp BCTTTCCBC-TTHHHHHGGGSCTTSEEEE
T ss_pred CcccccccC-HHHHHHHHHhCcccCEEEE
Confidence 32 111 23345555544 456554
No 85
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=84.57 E-value=13 Score=34.39 Aligned_cols=111 Identities=14% Similarity=0.074 Sum_probs=69.3
Q ss_pred CCCHHH---HHHHHHHHHHHHHhCCCCEEEeccC----------C-----------CH-H---HHHHHHHHHHHh-CCCc
Q 021144 160 AVSLET---LKEFHRRRVLILANSGADLIAFETI----------P-----------NK-L---EAKAYAELLEEE-GITI 210 (317)
Q Consensus 160 ~~s~~e---l~~~h~~qi~~l~~~gvD~l~~ET~----------p-----------~~-~---Ea~a~~~~~~~~-~~~~ 210 (317)
+++.+| +.+.|.+.++...++|.|.|=+--- | ++ . =+..+++++++. +.+.
T Consensus 141 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~ 220 (349)
T 3hgj_A 141 PLDEAGMERILQAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPREL 220 (349)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCc
Confidence 477666 4557777777778899998833211 1 11 1 134566666664 4568
Q ss_pred cEEEEEEEcCCCcccCCCcHHHHHHH---hhcCCCceEEEEcCC----------ChhhhHHHHHHHHhhCCCcEEE
Q 021144 211 PAWFSFNSKDGINVVSGDSILECASI---ADSCEQVVAVGINCT----------SPRFIHGLILSVRKVTSKPVII 273 (317)
Q Consensus 211 pv~iSf~~~~~~~l~~G~~l~~a~~~---~~~~~~~~aiGvNC~----------~p~~~~~~l~~l~~~~~~pl~v 273 (317)
|+.+-++..+. ...|.++++.+.. +.+ .+++.|-+-+. .|..-..+++.+++..+.|+++
T Consensus 221 pV~vRls~~~~--~~~g~~~~~~~~la~~L~~-~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~ 293 (349)
T 3hgj_A 221 PLFVRVSATDW--GEGGWSLEDTLAFARRLKE-LGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVGLRTGA 293 (349)
T ss_dssp CEEEEEESCCC--STTSCCHHHHHHHHHHHHH-TTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHCCEEEE
T ss_pred eEEEEeccccc--cCCCCCHHHHHHHHHHHHH-cCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcCceEEE
Confidence 99998876542 3356677765544 343 47888877652 1334456778888877888654
No 86
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=84.54 E-value=8.1 Score=37.96 Aligned_cols=63 Identities=13% Similarity=0.081 Sum_probs=39.3
Q ss_pred HHHHHhCCCCEEEec----c-----------CCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhh
Q 021144 174 VLILANSGADLIAFE----T-----------IPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIAD 238 (317)
Q Consensus 174 i~~l~~~gvD~l~~E----T-----------~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~ 238 (317)
++.+.++|||.|.+- + .|.+..+..+.+++++. ++|++++.-+ . +..++++.+.
T Consensus 311 a~~~~~aGad~i~vg~g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~~--~iPVIa~GGI------~---~~~di~kala 379 (511)
T 3usb_A 311 TKALIEAGANVVKVGIGPGSICTTRVVAGVGVPQLTAVYDCATEARKH--GIPVIADGGI------K---YSGDMVKALA 379 (511)
T ss_dssp HHHHHHHTCSEEEECSSCSTTCCHHHHHCCCCCHHHHHHHHHHHHHTT--TCCEEEESCC------C---SHHHHHHHHH
T ss_pred HHHHHHhCCCEEEECCCCccccccccccCCCCCcHHHHHHHHHHHHhC--CCcEEEeCCC------C---CHHHHHHHHH
Confidence 556777899999751 1 45565555556666654 4899976522 2 3456666665
Q ss_pred cCCCceEEEEc
Q 021144 239 SCEQVVAVGIN 249 (317)
Q Consensus 239 ~~~~~~aiGvN 249 (317)
.++++|++-
T Consensus 380 --~GA~~V~vG 388 (511)
T 3usb_A 380 --AGAHVVMLG 388 (511)
T ss_dssp --TTCSEEEES
T ss_pred --hCchhheec
Confidence 366777665
No 87
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=83.46 E-value=22 Score=31.10 Aligned_cols=104 Identities=13% Similarity=0.014 Sum_probs=63.9
Q ss_pred HHHHHHHHHhC-CCCEEEeccCC--CHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEE
Q 021144 170 HRRRVLILANS-GADLIAFETIP--NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAV 246 (317)
Q Consensus 170 h~~qi~~l~~~-gvD~l~~ET~p--~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~ai 246 (317)
|.+.++..++. ++|++=+|-.. .-...+.+++.+++.+ ..+++|+.--+ .+++-+.+.+.+..+.. .+++.+
T Consensus 85 ~~~ll~~~~~~~~~d~iDvEl~~~~~~~~~~~l~~~~~~~~--~kvI~S~Hdf~--~tp~~~el~~~~~~~~~-~gaDiv 159 (238)
T 1sfl_A 85 YLNLISDLANINGIDMIDIEWQADIDIEKHQRIITHLQQYN--KEVIISHHNFE--STPPLDELQFIFFKMQK-FNPEYV 159 (238)
T ss_dssp HHHHHHHGGGCTTCCEEEEECCTTSCHHHHHHHHHHHHHTT--CEEEEEEEESS--CCCCHHHHHHHHHHHHT-TCCSEE
T ss_pred HHHHHHHHHHhCCCCEEEEEccCCCChHHHHHHHHHHHhcC--CEEEEEecCCC--CCcCHHHHHHHHHHHHH-cCCCEE
Confidence 33445556655 69999999766 5555677777777644 88999995322 12222224444444443 566766
Q ss_pred EEcCC--ChhhhHHHHHHHH---hhCCCcEEEEeCCC
Q 021144 247 GINCT--SPRFIHGLILSVR---KVTSKPVIIYPNSG 278 (317)
Q Consensus 247 GvNC~--~p~~~~~~l~~l~---~~~~~pl~vyPNaG 278 (317)
=+-+. +++.+..+++... ...+.|++.+.-+.
T Consensus 160 Kia~~a~~~~D~l~ll~~~~~~~~~~~~P~I~~~MG~ 196 (238)
T 1sfl_A 160 KLAVMPHNKNDVLNLLQAMSTFSDTMDCKVVGISMSK 196 (238)
T ss_dssp EEEECCSSHHHHHHHHHHHHHHHHHCSSEEEEEECTG
T ss_pred EEEecCCCHHHHHHHHHHHHHHhhcCCCCEEEEECCC
Confidence 66664 5677777765433 33578998887653
No 88
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=83.34 E-value=0.75 Score=42.17 Aligned_cols=38 Identities=32% Similarity=0.359 Sum_probs=31.9
Q ss_pred HHHHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEE
Q 021144 171 RRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAW 213 (317)
Q Consensus 171 ~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~ 213 (317)
.+|++++.++|+|.|++|.+|+.+|++.+.+.+ ++|++
T Consensus 171 i~Ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~-----~~P~i 208 (287)
T 3b8i_A 171 IQRTLAYQEAGADGICLVGVRDFAHLEAIAEHL-----HIPLM 208 (287)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSHHHHHHHHTTC-----CSCEE
T ss_pred HHHHHHHHHcCCCEEEecCCCCHHHHHHHHHhC-----CCCEE
Confidence 348899999999999999999999988877543 37887
No 89
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=83.07 E-value=13 Score=34.95 Aligned_cols=64 Identities=13% Similarity=0.087 Sum_probs=36.3
Q ss_pred HHHHHHhCCCCEEEec----c-----------CCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHh
Q 021144 173 RVLILANSGADLIAFE----T-----------IPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIA 237 (317)
Q Consensus 173 qi~~l~~~gvD~l~~E----T-----------~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~ 237 (317)
.++.+.++|+|+|.+- + .|.+.-+..+.+++++. ++||+.+-- +. +..++++.+
T Consensus 162 ~A~~a~~aGAD~I~vG~gpGs~~~tr~~~g~g~p~~~~l~~v~~~~~~~--~iPVIA~GG------I~---~~~di~kal 230 (366)
T 4fo4_A 162 GARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEY--GIPVIADGG------IR---FSGDISKAI 230 (366)
T ss_dssp HHHHHHHHTCSEEEECSSCSTTBCHHHHHCCCCCHHHHHHHHHHHHGGG--TCCEEEESC------CC---SHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEecCCCCCCCcccccCcccchHHHHHHHHHHHhhc--CCeEEEeCC------CC---CHHHHHHHH
Confidence 3555777899999982 1 24333333444444443 489986542 12 345666666
Q ss_pred hcCCCceEEEEc
Q 021144 238 DSCEQVVAVGIN 249 (317)
Q Consensus 238 ~~~~~~~aiGvN 249 (317)
. .++++|++-
T Consensus 231 a--~GAd~V~vG 240 (366)
T 4fo4_A 231 A--AGASCVMVG 240 (366)
T ss_dssp H--TTCSEEEES
T ss_pred H--cCCCEEEEC
Confidence 5 366777664
No 90
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=82.81 E-value=33 Score=33.26 Aligned_cols=64 Identities=14% Similarity=0.151 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHhCCCCEEEec-cC--CCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhh
Q 021144 168 EFHRRRVLILANSGADLIAFE-TI--PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIAD 238 (317)
Q Consensus 168 ~~h~~qi~~l~~~gvD~l~~E-T~--p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~ 238 (317)
+++.+.++.+.+.|+|.|.+= |. -...++..+++.+++.- ++| +++-+.++ .|..+..++..+.
T Consensus 158 e~~~~~a~~l~~~Gad~I~l~DT~G~~~P~~v~~lv~~l~~~~-~~~--i~~H~Hnd----~GlAvAN~laAv~ 224 (464)
T 2nx9_A 158 QTWVDVAQQLAELGVDSIALKDMAGILTPYAAEELVSTLKKQV-DVE--LHLHCHST----AGLADMTLLKAIE 224 (464)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHHC-CSC--EEEEECCT----TSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEEcCCCCCcCHHHHHHHHHHHHHhc-CCe--EEEEECCC----CChHHHHHHHHHH
Confidence 467777888999999999664 43 36888999999998753 344 56666554 4666666666665
No 91
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=82.51 E-value=4.2 Score=37.25 Aligned_cols=91 Identities=19% Similarity=0.150 Sum_probs=57.6
Q ss_pred hCCCCEEEeccCCCHHHHH---HHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCCChh-
Q 021144 179 NSGADLIAFETIPNKLEAK---AYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPR- 254 (317)
Q Consensus 179 ~~gvD~l~~ET~p~~~Ea~---a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~~p~- 254 (317)
+.|+++++-|.+..-.... ...+.+ ....+.|+++++.-. +-..+.++++.+.+ . .++|-|||.+|.
T Consensus 26 ~~G~gli~te~~~~~~~~~~~~~~~~~l-~~~~~~~~~~QL~g~------~~~~~~~aa~~a~~-~-~d~Iein~gcP~~ 96 (318)
T 1vhn_A 26 EWGADFAFSEMVSAKGFLMNSQKTEELL-PQPHERNVAVQIFGS------EPNELSEAARILSE-K-YKWIDLNAGCPVR 96 (318)
T ss_dssp TTTCCCEECSCEEHHHHHTTCHHHHHHS-CCTTCTTEEEEEECS------CHHHHHHHHHHHTT-T-CSEEEEEECCCCH
T ss_pred HHCcCEEEeCCEEEcccccCCHhHHHhh-hCcCCCeEEEEeCCC------CHHHHHHHHHHHHH-h-CCEEEEECCCCcH
Confidence 4689999999764322111 111222 122358999999611 12445667776665 4 899999997552
Q ss_pred ----------------hhHHHHHHHHhhCCCcEEEEeCCC
Q 021144 255 ----------------FIHGLILSVRKVTSKPVIIYPNSG 278 (317)
Q Consensus 255 ----------------~~~~~l~~l~~~~~~pl~vyPNaG 278 (317)
.+..+++.+++..+.|+++.-..|
T Consensus 97 ~~r~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~G 136 (318)
T 1vhn_A 97 KVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRLG 136 (318)
T ss_dssp HHHHTTCGGGGGSCHHHHHHHHHHHHHHCSSEEEEEEESC
T ss_pred hcCCCCcccchhhCHHHHHHHHHHHHHhhCCCEEEEecCC
Confidence 345667788877789999887765
No 92
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=82.43 E-value=25 Score=32.32 Aligned_cols=113 Identities=12% Similarity=0.096 Sum_probs=70.3
Q ss_pred CCCHHHH---HHHHHHHHHHHHhCCCCEEEeccC----------CC---------------HHHHHHHHHHHHHhCCCcc
Q 021144 160 AVSLETL---KEFHRRRVLILANSGADLIAFETI----------PN---------------KLEAKAYAELLEEEGITIP 211 (317)
Q Consensus 160 ~~s~~el---~~~h~~qi~~l~~~gvD~l~~ET~----------p~---------------~~Ea~a~~~~~~~~~~~~p 211 (317)
.++.+|+ .+.|.+.++.+.++|.|.|=+--- |. .+-+..+++++++.- +.|
T Consensus 133 ~mt~~eI~~~i~~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v-~~p 211 (338)
T 1z41_A 133 EMSAEKVKETVQEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVW-DGP 211 (338)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSC
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHc-CCc
Confidence 3676765 456777777778899999844321 11 122455667777765 689
Q ss_pred EEEEEEEcCCCcccCCCcHHHHHHH---hhcCCCceEEEEcCC---------ChhhhHHHHHHHHhhCCCcEEEEeCCC
Q 021144 212 AWFSFNSKDGINVVSGDSILECASI---ADSCEQVVAVGINCT---------SPRFIHGLILSVRKVTSKPVIIYPNSG 278 (317)
Q Consensus 212 v~iSf~~~~~~~l~~G~~l~~a~~~---~~~~~~~~aiGvNC~---------~p~~~~~~l~~l~~~~~~pl~vyPNaG 278 (317)
+.+-++..+. ...|.+++++++. +.+ .+++.|-+-.. .|..-...++.+++..+.|+++ |.|
T Consensus 212 v~vris~~~~--~~~g~~~~~~~~~a~~l~~-~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~--~Gg 285 (338)
T 1z41_A 212 LFVRVSASDY--TDKGLDIADHIGFAKWMKE-QGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQADMATGA--VGM 285 (338)
T ss_dssp EEEEEECCCC--STTSCCHHHHHHHHHHHHH-TTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHCCEEEE--CSS
T ss_pred EEEEecCccc--CCCCCCHHHHHHHHHHHHH-cCCCEEEEecCccccCCCCCCccchHHHHHHHHHHCCCCEEE--ECC
Confidence 9988876542 2357677665444 443 47787776432 1223356778888877888654 555
No 93
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=82.35 E-value=7.6 Score=35.35 Aligned_cols=116 Identities=17% Similarity=0.144 Sum_probs=66.5
Q ss_pred CeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccE
Q 021144 133 PVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPA 212 (317)
Q Consensus 133 ~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv 212 (317)
.++|.++++ +|. |. .+.++. ++.-++.+.++|++.+-+|-- .|+...++++.+.+ .||
T Consensus 95 ~~~vvaD~p-fgs-----------y~--~s~~~a---~~na~rl~~eaGa~aVklEdg---~e~~~~I~al~~ag--IpV 152 (281)
T 1oy0_A 95 HALVVADLP-FGS-----------YE--AGPTAA---LAAATRFLKDGGAHAVKLEGG---ERVAEQIACLTAAG--IPV 152 (281)
T ss_dssp TSEEEEECC-TTS-----------ST--TCHHHH---HHHHHHHHHTTCCSEEEEEBS---GGGHHHHHHHHHHT--CCE
T ss_pred CCeEEEECC-CCc-----------cc--CCHHHH---HHHHHHHHHHhCCeEEEECCc---HHHHHHHHHHHHCC--CCE
Confidence 356778875 443 32 244443 333455566799999999975 35556666666666 899
Q ss_pred EEEEEEcCC------CcccCCCc--HHHHHHHhh--cCCCceEEEEcCCChhhhHHHHHHHHhhCCCcEEEE
Q 021144 213 WFSFNSKDG------INVVSGDS--ILECASIAD--SCEQVVAVGINCTSPRFIHGLILSVRKVTSKPVIIY 274 (317)
Q Consensus 213 ~iSf~~~~~------~~l~~G~~--l~~a~~~~~--~~~~~~aiGvNC~~p~~~~~~l~~l~~~~~~pl~vy 274 (317)
+-.+-+.+. +...-|.+ .+++++.+. +..++++|=+-|... .+.+.+.+..+.|++..
T Consensus 153 ~gHiGLtPqsv~~~ggf~v~grt~~a~~~i~rA~a~~eAGA~~ivlE~vp~----~~a~~it~~l~iP~igI 220 (281)
T 1oy0_A 153 MAHIGFTPQSVNTLGGFRVQGRGDAAEQTIADAIAVAEAGAFAVVMEMVPA----ELATQITGKLTIPTVGI 220 (281)
T ss_dssp EEEEECCC--------------CHHHHHHHHHHHHHHHHTCSEEEEESCCH----HHHHHHHHHCSSCEEEE
T ss_pred EeeecCCcceecccCCeEEEeCcHHHHHHHHHHHHHHHcCCcEEEEecCCH----HHHHHHHHhCCCCEEEe
Confidence 865544322 12222322 233332221 124889999999853 35566777778897664
No 94
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=82.19 E-value=16 Score=33.04 Aligned_cols=28 Identities=29% Similarity=0.406 Sum_probs=25.2
Q ss_pred CCChHHHHHHHHHHHHhhcccccccccc
Q 021144 51 VSSPHLVRKVHLDYLDAGANIIITASYQ 78 (317)
Q Consensus 51 l~~Pe~V~~iH~~Yl~AGAdiI~TnTy~ 78 (317)
++++|...++-+.--++|||++..-+|.
T Consensus 48 ~~~~e~a~~~a~~~k~~ga~~~k~~~~k 75 (276)
T 1vs1_A 48 VESWEQVREAALAVKEAGAHMLRGGAFK 75 (276)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEECBSSC
T ss_pred CCCHHHHHHHHHHHHHhCCCEEEeEEEe
Confidence 6899999999999999999999887776
No 95
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=82.18 E-value=5.1 Score=37.33 Aligned_cols=111 Identities=13% Similarity=0.122 Sum_probs=66.9
Q ss_pred CCCCEEEeccCCCHHHHH----HHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCCCh--
Q 021144 180 SGADLIAFETIPNKLEAK----AYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSP-- 253 (317)
Q Consensus 180 ~gvD~l~~ET~p~~~Ea~----a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~~p-- 253 (317)
+|++++.-|.+..-..+. .+++ +.. .+.|+++++... +-..+.++++.+.+ .+.++|-|||.+|
T Consensus 27 Gg~gli~te~~~~~~~~~~~~~~~~~-~~~--~~~p~~vQL~g~------~p~~~~~aA~~a~~-~G~D~IeIn~gcP~~ 96 (350)
T 3b0p_A 27 SLGVRLYTEMTVDQAVLRGNRERLLA-FRP--EEHPIALQLAGS------DPKSLAEAARIGEA-FGYDEINLNLGCPSE 96 (350)
T ss_dssp CSSSBEECCCEEHHHHHHSCHHHHHC-CCG--GGCSEEEEEECS------CHHHHHHHHHHHHH-TTCSEEEEEECCCSH
T ss_pred CCCCEEEeCCEEechhhcCCHHHHhc-cCC--CCCeEEEEeCCC------CHHHHHHHHHHHHH-cCCCEEEECCcCCCC
Confidence 567999999775322111 1121 112 247999998521 12445667776655 5899999998644
Q ss_pred ---------------hhhHHHHHHHHhhCCCcEEEEeCCCCccccccccccccCCCChhhHHHHHHHHHHccc
Q 021144 254 ---------------RFIHGLILSVRKVTSKPVIIYPNSGETYNAELKKWVVSFSLHFFPLELILNPFASCRL 311 (317)
Q Consensus 254 ---------------~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~w~~~~~~~~~~~~~~~~~w~~~~~ 311 (317)
+.+..+++.+++..+.|+++.=..|. +. + .+.+...++++.+.+.|+
T Consensus 97 ~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~g~--~~----~-----~~~~~~~~~a~~l~~aG~ 158 (350)
T 3b0p_A 97 KAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGL--EG----K-----ETYRGLAQSVEAMAEAGV 158 (350)
T ss_dssp HHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEESCB--TT----C-----CCHHHHHHHHHHHHHTTC
T ss_pred cCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEecCc--Cc----c-----ccHHHHHHHHHHHHHcCC
Confidence 34556777887777899988544431 11 0 123456666777777774
No 96
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A*
Probab=81.82 E-value=34 Score=32.92 Aligned_cols=130 Identities=12% Similarity=0.111 Sum_probs=81.0
Q ss_pred HHHHHHHhCCCCEEEeccCC---------------CHHHHHH----HHHHHHHhCCCccEEEEEEEcCCC----------
Q 021144 172 RRVLILANSGADLIAFETIP---------------NKLEAKA----YAELLEEEGITIPAWFSFNSKDGI---------- 222 (317)
Q Consensus 172 ~qi~~l~~~gvD~l~~ET~p---------------~~~Ea~a----~~~~~~~~~~~~pv~iSf~~~~~~---------- 222 (317)
+-++.+.++||-.|-+|-.. +.+|+.. ++.+.+..+ .+++|--..+...
T Consensus 164 rtVk~~~~AGaAGi~IEDQ~~~~KkCGH~~gk~lvp~ee~v~rI~AAr~A~~~~g--~d~vIiARTDA~~a~l~~s~~d~ 241 (433)
T 3eol_A 164 EIMKAYIEAGAAGVHFEDQLASEKKCGHLGGKVLIPTAAHIRNLNAARLAADVMG--TPTLIVARTDAEAAKLLTSDIDE 241 (433)
T ss_dssp HHHHHHHHHTCSEEEEESBCC---------CCEECCHHHHHHHHHHHHHHHHHHT--CCCEEEEEECTTTCCEESCCCST
T ss_pred HHHHHHHHcCCeEEEEecCCCCCCcCCCCCCCcccCHHHHHHHHHHHHHHHHhcC--CCEEEEEEcCCccccccccCccc
Confidence 35888999999999999654 3555443 444433334 4666655554311
Q ss_pred -----------cccCC-----CcHHHHHHHhhc-CCCceEEEEcCC--ChhhhHHHHHHHHhhCCCcEEEEeCCCCcccc
Q 021144 223 -----------NVVSG-----DSILECASIADS-CEQVVAVGINCT--SPRFIHGLILSVRKVTSKPVIIYPNSGETYNA 283 (317)
Q Consensus 223 -----------~l~~G-----~~l~~a~~~~~~-~~~~~aiGvNC~--~p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~ 283 (317)
++..| ..++++++.+.. ..+++.|=+-.. .++.+..+.+.++.....++++|+++..
T Consensus 242 rd~~fl~g~g~r~~eG~y~~~~gld~AI~Ra~AY~~GAD~If~e~~~~~~eei~~f~~~v~~~~P~~~L~~~~sPs---- 317 (433)
T 3eol_A 242 RDQPFVDYEAGRTAEGFYQVKNGIEPCIARAIAYAPYCDLIWMETSKPDLAQARRFAEAVHKAHPGKLLAYNCSPS---- 317 (433)
T ss_dssp TTGGGBCSSSCBCTTCCEEBCCSHHHHHHHHHHHGGGCSEEEECCSSCCHHHHHHHHHHHHHHSTTCCEEEECCSS----
T ss_pred ccccceeccCcccccccccccCCHHHHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHHhcccCCCcccccCCCCC----
Confidence 11111 558888877642 127888888653 5688888888887655566788877631
Q ss_pred ccccccccCCCChhhHHHHHHHHHHccc
Q 021144 284 ELKKWVVSFSLHFFPLELILNPFASCRL 311 (317)
Q Consensus 284 ~~~~w~~~~~~~~~~~~~~~~~w~~~~~ 311 (317)
-+|... +++++...+..++.+.|+
T Consensus 318 --fnw~~~--~~~~~~~~f~~eLa~lGv 341 (433)
T 3eol_A 318 --FNWKKN--LDDATIAKFQRELGAMGY 341 (433)
T ss_dssp --SCHHHH--SCHHHHHHHHHHHHHHTE
T ss_pred --Cccccc--CChhHHhHHHHHHHHcCC
Confidence 245321 466677777777777664
No 97
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A
Probab=81.69 E-value=30 Score=33.36 Aligned_cols=131 Identities=13% Similarity=0.106 Sum_probs=84.6
Q ss_pred HHHHHHHhCCCCEEEeccCC---------------CHHHHHH----HHHHHHHhCCCccEEEEEEEcCCC----------
Q 021144 172 RRVLILANSGADLIAFETIP---------------NKLEAKA----YAELLEEEGITIPAWFSFNSKDGI---------- 222 (317)
Q Consensus 172 ~qi~~l~~~gvD~l~~ET~p---------------~~~Ea~a----~~~~~~~~~~~~pv~iSf~~~~~~---------- 222 (317)
+-++.|.++||-.+-+|-.. +.+|+.. ++.+.+..+ .+++|--..+...
T Consensus 171 ~tv~~~~~aGaaGi~IEDq~~~~KkCGh~~gk~lv~~~e~~~rI~Aa~~A~~~~~--~d~~IiARTDa~aa~l~~s~~d~ 248 (435)
T 3lg3_A 171 ELMKAMIEAGAAGVHFEDQLAAVKKCGHMGGKVLVPTQEAIQKLVAARLAADVLG--VPTLLIARTDADAADLLTSDCDP 248 (435)
T ss_dssp HHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCEECCHHHHHHHHHHHHHHHHHHT--CCCEEEEEECTTTCCEESCCCCG
T ss_pred HHHHHHHHcCCEEEEEecCCCCccccCCCCCCeecCHHHHHHHHHHHHHHHHhcC--CCeEEEEEcCCcccccccccccc
Confidence 45788999999999999643 3566544 333333334 5666666555321
Q ss_pred ---cccCC-----------CcHHHHHHHhhc-CCCceEEEEcCC--ChhhhHHHHHHHHhhCCCcEEEEeCCCCcccccc
Q 021144 223 ---NVVSG-----------DSILECASIADS-CEQVVAVGINCT--SPRFIHGLILSVRKVTSKPVIIYPNSGETYNAEL 285 (317)
Q Consensus 223 ---~l~~G-----------~~l~~a~~~~~~-~~~~~aiGvNC~--~p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~ 285 (317)
....| ..+.+++..+.. ..++++|=+-.. .++.+..+.+.++......+++|+++..
T Consensus 249 rD~~fi~G~r~~eG~y~~~~gld~AI~Ra~AY~~GAD~if~E~~~~~~~ei~~f~~~v~~~~P~~~La~~~sPs------ 322 (435)
T 3lg3_A 249 YDREFITGDRTAEGFFRTRAGIEQAISRGLAYAPYADLVWCETSTPDLALAKRFADAVHAQFPGKLLAYNCSPS------ 322 (435)
T ss_dssp GGGGGEEEEECTTCCEEECCSHHHHHHHHHHHGGGCSEEEECCSSCCHHHHHHHHHHHHHHSTTCEEEEECCSS------
T ss_pred ccchhhcccccccccccccCCHHHHHHHHHHHHccCCEEEecCCCCCHHHHHHHHHHhccccCCeEEEeCCCCC------
Confidence 12222 558888876542 127888888553 5677888888887655556888877632
Q ss_pred ccccccCCCChhhHHHHHHHHHHcccc
Q 021144 286 KKWVVSFSLHFFPLELILNPFASCRLI 312 (317)
Q Consensus 286 ~~w~~~~~~~~~~~~~~~~~w~~~~~~ 312 (317)
-+|.. .++++++..|..++.+.|+-
T Consensus 323 fnw~~--~~~d~~~~~f~~eLa~lG~~ 347 (435)
T 3lg3_A 323 FNWKK--NLTDQQIASFQDELSAMGYK 347 (435)
T ss_dssp SCHHH--HSCHHHHHHHHHHHHHTTEE
T ss_pred ccccc--cCCHHHHHHHHHHHHHcCCc
Confidence 24642 26788888888888888853
No 98
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=81.61 E-value=12 Score=37.06 Aligned_cols=96 Identities=9% Similarity=0.044 Sum_probs=66.1
Q ss_pred HHHHHHhCCCCEEE-eccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHH---HHhhcCCCceEEEE
Q 021144 173 RVLILANSGADLIA-FETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECA---SIADSCEQVVAVGI 248 (317)
Q Consensus 173 qi~~l~~~gvD~l~-~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~---~~~~~~~~~~aiGv 248 (317)
-++.+.++|+|.|- |-...+++.++.+++++++.+ ..+-+++++.+.. ..+++.++ +.+.+ .+++.|.+
T Consensus 122 ~ve~a~~aGvd~vrIf~s~sd~~ni~~~i~~ak~~G--~~v~~~i~~~~~~----~~~~e~~~~~a~~l~~-~Gad~I~L 194 (539)
T 1rqb_A 122 FVDKSAENGMDVFRVFDAMNDPRNMAHAMAAVKKAG--KHAQGTICYTISP----VHTVEGYVKLAGQLLD-MGADSIAL 194 (539)
T ss_dssp HHHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHHTT--CEEEEEEECCCST----TCCHHHHHHHHHHHHH-TTCSEEEE
T ss_pred HHHHHHhCCCCEEEEEEehhHHHHHHHHHHHHHHCC--CeEEEEEEeeeCC----CCCHHHHHHHHHHHHH-cCCCEEEe
Confidence 35567789999885 446667888888899999877 5565566554432 23454444 44443 47777776
Q ss_pred c----CCChhhhHHHHHHHHhhC--CCcEEEEe
Q 021144 249 N----CTSPRFIHGLILSVRKVT--SKPVIIYP 275 (317)
Q Consensus 249 N----C~~p~~~~~~l~~l~~~~--~~pl~vyP 275 (317)
- +..|..+..+++.+++.. +.||.+..
T Consensus 195 ~DT~G~~~P~~v~~lv~~l~~~~p~~i~I~~H~ 227 (539)
T 1rqb_A 195 KDMAALLKPQPAYDIIKAIKDTYGQKTQINLHC 227 (539)
T ss_dssp EETTCCCCHHHHHHHHHHHHHHHCTTCCEEEEE
T ss_pred CCCCCCcCHHHHHHHHHHHHHhcCCCceEEEEe
Confidence 4 335999999999998876 67888776
No 99
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=81.39 E-value=29 Score=31.18 Aligned_cols=139 Identities=12% Similarity=0.090 Sum_probs=76.0
Q ss_pred ChHHHHHHHHHHHHhhcccccc-ccccccHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCC
Q 021144 53 SPHLVRKVHLDYLDAGANIIIT-ASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (317)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~T-nTy~as~~~l~~~g~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (317)
+.+.+++.-+.++++|.+-|.. -|-+=. .-++.+|-.++++.+++.+. +
T Consensus 20 D~~~l~~lv~~li~~Gv~gl~~~GttGE~------~~Ls~~Er~~v~~~~~~~~~------------------------g 69 (292)
T 2ojp_A 20 CRASLKKLIDYHVASGTSAIVSVGTTGES------ATLNHDEHADVVMMTLDLAD------------------------G 69 (292)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEESSTTTTG------GGSCHHHHHHHHHHHHHHHT------------------------T
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccch------hhCCHHHHHHHHHHHHHHhC------------------------C
Confidence 4567888888889999996543 332211 12455666777777665542 2
Q ss_pred CCeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEeccC----CCHHHHHHHHHHHHHhC
Q 021144 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI----PNKLEAKAYAELLEEEG 207 (317)
Q Consensus 132 ~~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~ET~----p~~~Ea~a~~~~~~~~~ 207 (317)
+-..|+|. |. .+.++.. ++++...+.|+|.+++=+= |+-+++..-.+.+.+..
T Consensus 70 r~pviaGv-g~------------------~~t~~ai----~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~ 126 (292)
T 2ojp_A 70 RIPVIAGT-GA------------------NATAEAI----SLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIAEHT 126 (292)
T ss_dssp SSCEEEEC-CC------------------SSHHHHH----HHHHHTTTSSCSEEEEECCCSSCCCHHHHHHHHHHHHTTC
T ss_pred CCcEEEec-CC------------------ccHHHHH----HHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc
Confidence 23466662 32 1334433 2456667789998876542 46666666666555543
Q ss_pred CCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCC
Q 021144 208 ITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCT 251 (317)
Q Consensus 208 ~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~ 251 (317)
++|+++= +..+++--.-+++...+.+ +. +..+||--+
T Consensus 127 -~lPiilY---n~P~~tg~~l~~~~~~~La-~~--pnivgiK~s 163 (292)
T 2ojp_A 127 -DLPQILY---NVPSRTGCDLLPETVGRLA-KV--KNIIGIXEA 163 (292)
T ss_dssp -SSCEEEE---CCHHHHSCCCCHHHHHHHH-TS--TTEEEC-CC
T ss_pred -CCCEEEE---eCcchhccCCCHHHHHHHH-cC--CCEEEEeCC
Confidence 5888731 1112221223444444444 33 346666554
No 100
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=81.37 E-value=13 Score=33.15 Aligned_cols=108 Identities=13% Similarity=0.120 Sum_probs=64.2
Q ss_pred CCHHHHHHHHHHHHHHHHhCC-CCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhc
Q 021144 161 VSLETLKEFHRRRVLILANSG-ADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADS 239 (317)
Q Consensus 161 ~s~~el~~~h~~qi~~l~~~g-vD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~ 239 (317)
.+.++..+ .++.+.+.| ||++=+|-...-+-.+.+++.+++.+ ..+++|+---+ .+.+-+.+.+.+..+..
T Consensus 96 ~~~~~~~~----ll~~~~~~~~~d~iDvEl~~~~~~~~~l~~~a~~~~--~kiI~S~Hdf~--~TP~~~el~~~~~~~~~ 167 (258)
T 4h3d_A 96 ISRDYYTT----LNKEISNTGLVDLIDVELFMGDEVIDEVVNFAHKKE--VKVIISNHDFN--KTPKKEEIVSRLCRMQE 167 (258)
T ss_dssp CCHHHHHH----HHHHHHHTTCCSEEEEEGGGCHHHHHHHHHHHHHTT--CEEEEEEEESS--CCCCHHHHHHHHHHHHH
T ss_pred CCHHHHHH----HHHHHHhcCCchhhHHhhhccHHHHHHHHHHHHhCC--CEEEEEEecCC--CCCCHHHHHHHHHHHHH
Confidence 35544433 334444444 99999997766666677777777654 89999995321 12232334444444544
Q ss_pred CCCceEEEEcCC--ChhhhHHHHHHHHh----hCCCcEEEEeCC
Q 021144 240 CEQVVAVGINCT--SPRFIHGLILSVRK----VTSKPVIIYPNS 277 (317)
Q Consensus 240 ~~~~~aiGvNC~--~p~~~~~~l~~l~~----~~~~pl~vyPNa 277 (317)
.+++.+=|-+. +++.+..+++...+ ..++|++.+.=+
T Consensus 168 -~gaDIvKia~~~~~~~D~l~Ll~~~~~~~~~~~~~P~I~~~MG 210 (258)
T 4h3d_A 168 -LGADLPKIAVMPQNEKDVLVLLEATNEMFKIYADRPIITMSMS 210 (258)
T ss_dssp -TTCSEEEEEECCSSHHHHHHHHHHHHHHHHHTCSSCBEEEECT
T ss_pred -hCCCEEEEEEccCCHHHHHHHHHHHHHHHHhcCCCCEEEEeCC
Confidence 46676666554 56777777654332 247898776544
No 101
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=81.15 E-value=41 Score=32.45 Aligned_cols=131 Identities=13% Similarity=0.107 Sum_probs=83.5
Q ss_pred HHHHHHHhCCCCEEEeccCC---------------CHHHHHH----HHHHHHHhCCCccEEEEEEEcCCC----------
Q 021144 172 RRVLILANSGADLIAFETIP---------------NKLEAKA----YAELLEEEGITIPAWFSFNSKDGI---------- 222 (317)
Q Consensus 172 ~qi~~l~~~gvD~l~~ET~p---------------~~~Ea~a----~~~~~~~~~~~~pv~iSf~~~~~~---------- 222 (317)
+.++.++++||-.|-||-.. +.+|+.. ++.+.+..+ .|++|--..+...
T Consensus 171 ~~vk~~~~aGaaGi~iEDq~~~~KkCGH~~gk~lv~~~e~v~rI~Aar~A~~~~g--~d~~IiARTDa~~a~l~~s~~d~ 248 (439)
T 3i4e_A 171 ELMKAMIEAGASGVHFEDQLASVKKCGHMGGKVLVPTREAVAKLTAARLAADVMG--TPTVLVARTDAEAADLITSDIDD 248 (439)
T ss_dssp HHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCCBCCHHHHHHHHHHHHHHHHHHT--CCCEEEEEECTTTCCEESCCCCT
T ss_pred HHHHHHHHcCCEEEEEeCCCCCccccCCCCCCeecCHHHHHHHHHHHHHHHHhcC--CCeEEEEEcCccccccccccccc
Confidence 45788999999999999643 3556444 444444344 5666666554321
Q ss_pred ---------cccCC-----CcHHHHHHHhhc-CCCceEEEEcC-C-ChhhhHHHHHHHHhhCCCcEEEEeCCCCcccccc
Q 021144 223 ---------NVVSG-----DSILECASIADS-CEQVVAVGINC-T-SPRFIHGLILSVRKVTSKPVIIYPNSGETYNAEL 285 (317)
Q Consensus 223 ---------~l~~G-----~~l~~a~~~~~~-~~~~~aiGvNC-~-~p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~ 285 (317)
++..| ..+.++++.+.. ..+.++|=+-. . .++.+..+.+.++.....++++|+++..
T Consensus 249 ~d~~fi~G~r~~eg~~~~~~gldeAI~Ra~AY~~GAD~if~E~~~~~~eei~~f~~~v~~~~P~~~l~~~~sPs------ 322 (439)
T 3i4e_A 249 NDKPYLTGERTVEGFFRTKPGLEQAISRGLAYAPYADLIWCETGKPDLEYAKKFAEAIHKQFPGKLLSYNCSPS------ 322 (439)
T ss_dssp TTGGGEEEEECTTSCEEECCSHHHHHHHHHHHTTTCSEEEECCSSCCHHHHHHHHHHHHHHSTTCEEEEECCSS------
T ss_pred ccchhhcccCcccccccccCCHHHHHHHHHHHHhhCCEEEecCCCCCHHHHHHHHHHhcccCCceEEeeCCCCC------
Confidence 11111 458888877642 13788888854 2 5788888888887655567888887742
Q ss_pred ccccccCCCChhhHHHHHHHHHHcccc
Q 021144 286 KKWVVSFSLHFFPLELILNPFASCRLI 312 (317)
Q Consensus 286 ~~w~~~~~~~~~~~~~~~~~w~~~~~~ 312 (317)
-.|... +++++...|..++.+.|+-
T Consensus 323 fnw~~~--~~~~~~~~f~~eL~~lGv~ 347 (439)
T 3i4e_A 323 FNWKKN--LDDATIAKFQKELGAMGYK 347 (439)
T ss_dssp SCHHHH--SCHHHHHTHHHHHHHHTCC
T ss_pred CcCccc--CCHHHHHHHHHHHHHcCCe
Confidence 245422 5677777777777777753
No 102
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=81.06 E-value=25 Score=31.77 Aligned_cols=99 Identities=11% Similarity=-0.051 Sum_probs=63.2
Q ss_pred HHHHHhCCCCEEEecc-CC--------------CHHHHHHHHHHHHHhCCCccEEEEE----EEcCCCcccCCCcHHHHH
Q 021144 174 VLILANSGADLIAFET-IP--------------NKLEAKAYAELLEEEGITIPAWFSF----NSKDGINVVSGDSILECA 234 (317)
Q Consensus 174 i~~l~~~gvD~l~~ET-~p--------------~~~Ea~a~~~~~~~~~~~~pv~iSf----~~~~~~~l~~G~~l~~a~ 234 (317)
++..+++|+|.+.+-. .+ +++.++.+++.+++.+ +.|-..+ .+++.+ -++++.++
T Consensus 89 i~~a~~aG~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G--~~V~~~l~~~~~~e~~~----~~~~~~~~ 162 (302)
T 2ftp_A 89 FEAALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQ--VRVRGYISCVLGCPYDG----DVDPRQVA 162 (302)
T ss_dssp HHHHHHTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTT--CEEEEEEECTTCBTTTB----CCCHHHHH
T ss_pred HHHHHhCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCC--CeEEEEEEEEeeCCcCC----CCCHHHHH
Confidence 5556678999987622 21 1244566777788876 4443332 233332 24566665
Q ss_pred HHhh---cCCCceEEEEcC----CChhhhHHHHHHHHhhC-CCcEEEEe--CCCC
Q 021144 235 SIAD---SCEQVVAVGINC----TSPRFIHGLILSVRKVT-SKPVIIYP--NSGE 279 (317)
Q Consensus 235 ~~~~---~~~~~~aiGvNC----~~p~~~~~~l~~l~~~~-~~pl~vyP--NaG~ 279 (317)
+.++ + .+++.|.+-= ..|..+..+++.+++.. +.||.+.. |.|.
T Consensus 163 ~~~~~~~~-~G~d~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gl 216 (302)
T 2ftp_A 163 WVARELQQ-MGCYEVSLGDTIGVGTAGATRRLIEAVASEVPRERLAGHFHDTYGQ 216 (302)
T ss_dssp HHHHHHHH-TTCSEEEEEESSSCCCHHHHHHHHHHHTTTSCGGGEEEEEBCTTSC
T ss_pred HHHHHHHH-cCCCEEEEeCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEeCCCccH
Confidence 5553 4 4676655542 34999999999999887 58999999 7774
No 103
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=80.80 E-value=11 Score=36.89 Aligned_cols=65 Identities=12% Similarity=0.062 Sum_probs=42.4
Q ss_pred HHHHHHHhCCCCEEEeccCC-CHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEE
Q 021144 172 RRVLILANSGADLIAFETIP-NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGI 248 (317)
Q Consensus 172 ~qi~~l~~~gvD~l~~ET~p-~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGv 248 (317)
++++.+.++|+|+|.+-+-. +.......++.+++..+++|+++.. ..+.+.+....+ .++++|-+
T Consensus 234 ~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~~~p~~~Vi~g~----------v~t~e~a~~l~~--aGaD~I~V 299 (496)
T 4fxs_A 234 ERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGN----------VATAEGARALIE--AGVSAVKV 299 (496)
T ss_dssp HHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCCEEEEE----------ECSHHHHHHHHH--HTCSEEEE
T ss_pred HHHHHHHhccCceEEeccccccchHHHHHHHHHHHHCCCceEEEcc----------cCcHHHHHHHHH--hCCCEEEE
Confidence 46888999999999987543 3344555666676654468998732 234455544444 37788877
No 104
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=80.77 E-value=3.9 Score=36.98 Aligned_cols=99 Identities=10% Similarity=0.044 Sum_probs=65.7
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEe-----cc-CCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHH
Q 021144 161 VSLETLKEFHRRRVLILANSGADLIAF-----ET-IPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECA 234 (317)
Q Consensus 161 ~s~~el~~~h~~qi~~l~~~gvD~l~~-----ET-~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~ 234 (317)
++.+.++ ..++.+++. ||.|++ |. .-+.+|-+.+++.+.+ ++||++.. .+.+..+++
T Consensus 16 iD~~~l~----~lv~~li~~-v~gl~v~GttGE~~~Ls~~Er~~v~~~~~~---rvpviaGv---------g~~~t~~ai 78 (283)
T 2pcq_A 16 LDEEAFR----ELAQALEPL-VDGLLVYGSNGEGVHLTPEERARGLRALRP---RKPFLVGL---------MEETLPQAE 78 (283)
T ss_dssp BCHHHHH----HHHHHHGGG-SSCCEETCTTTTGGGSCHHHHHHHHHTCCC---SSCCEEEE---------CCSSHHHHH
T ss_pred cCHHHHH----HHHHHHHhh-CCEEEECCcCcCchhcCHHHHHHHHHHHHh---CCcEEEeC---------CCCCHHHHH
Confidence 6665544 467778888 998764 32 2257787788877665 58999877 234566666
Q ss_pred HHhhc--CCCceEEEEcCC---Ch---hhhHHHHHHHHhhCCCcEEEEeCCC
Q 021144 235 SIADS--CEQVVAVGINCT---SP---RFIHGLILSVRKVTSKPVIIYPNSG 278 (317)
Q Consensus 235 ~~~~~--~~~~~aiGvNC~---~p---~~~~~~l~~l~~~~~~pl~vyPNaG 278 (317)
+..+. ..+++++.+-.- .| +.+....+.+.+ +.|+++|=+-+
T Consensus 79 ~la~~A~~~Gadavlv~~P~y~~~~~~~~l~~~f~~va~--~lPiilYn~P~ 128 (283)
T 2pcq_A 79 GALLEAKAAGAMALLATPPRYYHGSLGAGLLRYYEALAE--KMPLFLYHVPQ 128 (283)
T ss_dssp HHHHHHHHHTCSEEEECCCCTTGGGTTTHHHHHHHHHHH--HSCEEEEECHH
T ss_pred HHHHHHHhcCCCEEEecCCcCCCCCCHHHHHHHHHHHhc--CCCEEEEeCcc
Confidence 55432 247888888663 23 445566666666 79999998754
No 105
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=80.75 E-value=11 Score=36.76 Aligned_cols=63 Identities=19% Similarity=0.133 Sum_probs=38.5
Q ss_pred HHHHHhCCCCEEEec----c-----------CCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhh
Q 021144 174 VLILANSGADLIAFE----T-----------IPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIAD 238 (317)
Q Consensus 174 i~~l~~~gvD~l~~E----T-----------~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~ 238 (317)
++.+.++|+|+|.+- + .|.+.-+..+.+++++. ++|++.+.-+ .+..++++.+.
T Consensus 284 a~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~--~iPVIa~GGI---------~~~~di~kal~ 352 (490)
T 4avf_A 284 AKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEGT--GVPLIADGGI---------RFSGDLAKAMV 352 (490)
T ss_dssp HHHHHHTTCSEEEECSSCSTTCHHHHHTCBCCCHHHHHHHHHHHHTTT--TCCEEEESCC---------CSHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECCCCCcCCCccccCCCCccHHHHHHHHHHHhccC--CCcEEEeCCC---------CCHHHHHHHHH
Confidence 566888999999872 1 34554445555555443 4899965421 14566666665
Q ss_pred cCCCceEEEEc
Q 021144 239 SCEQVVAVGIN 249 (317)
Q Consensus 239 ~~~~~~aiGvN 249 (317)
. ++++|++-
T Consensus 353 ~--GAd~V~vG 361 (490)
T 4avf_A 353 A--GAYCVMMG 361 (490)
T ss_dssp H--TCSEEEEC
T ss_pred c--CCCeeeec
Confidence 3 56666664
No 106
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=80.55 E-value=7.7 Score=36.25 Aligned_cols=58 Identities=17% Similarity=0.136 Sum_probs=37.4
Q ss_pred CccEEEEEEEcCCCcccCCCcHHH---HHHHhhcCCCce-EEEEcCCC------------hhhhHHHHHHHHhhCCCcEE
Q 021144 209 TIPAWFSFNSKDGINVVSGDSILE---CASIADSCEQVV-AVGINCTS------------PRFIHGLILSVRKVTSKPVI 272 (317)
Q Consensus 209 ~~pv~iSf~~~~~~~l~~G~~l~~---a~~~~~~~~~~~-aiGvNC~~------------p~~~~~~l~~l~~~~~~pl~ 272 (317)
+.|+++++. |.++++ +++.+.+. +.+ +|=|||++ |+.+.++++.+++.+++||+
T Consensus 128 ~~pvivsI~---------g~~~~d~~~~a~~l~~~-g~~d~ielNisCPn~~G~~~l~~~~e~l~~il~av~~~~~~PV~ 197 (345)
T 3oix_A 128 SKNHFLSLV---------GMSPEETHTILXMVEAS-KYQGLVELNLSCPNVPGXPQIAYDFETTDQILSEVFTYFTKPLG 197 (345)
T ss_dssp CCCCEEEEC---------CSSHHHHHHHHHHHHHS-SCCSEEEEECSCCCSTTCCCGGGCHHHHHHHHHHHTTTCCSCEE
T ss_pred CCCEEEEec---------CCCHHHHHHHHHHHhcc-CCCcEEEEecCCCCcCCchhhcCCHHHHHHHHHHHHHHhCCCeE
Confidence 578888883 444444 44444432 444 88888863 35567777778777788887
Q ss_pred EEeC
Q 021144 273 IYPN 276 (317)
Q Consensus 273 vyPN 276 (317)
|+=-
T Consensus 198 vKi~ 201 (345)
T 3oix_A 198 IKLP 201 (345)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 7653
No 107
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=80.38 E-value=7.9 Score=34.54 Aligned_cols=99 Identities=18% Similarity=0.150 Sum_probs=60.7
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEE-----EeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEc-CCCcccCCCc--HHHH
Q 021144 162 SLETLKEFHRRRVLILANSGADLI-----AFETIPNKLEAKAYAELLEEEGITIPAWFSFNSK-DGINVVSGDS--ILEC 233 (317)
Q Consensus 162 s~~el~~~h~~qi~~l~~~gvD~l-----~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~-~~~~l~~G~~--l~~a 233 (317)
+.+++.+ +++.+...|+|++ +++.+++..++...+..+++.-.++|+++++... ++|... +.. -.+.
T Consensus 30 t~~e~l~----~a~~~~~~~aD~vElR~D~l~~~~~~~~v~~~l~~lr~~~~~lPiI~T~Rt~~EGG~~~-~~~~~~~~l 104 (258)
T 4h3d_A 30 NKKDIIK----EAKELKDACLDIIEWRVDFFENVENIKEVKEVLYELRSYIHDIPLLFTFRSVVEGGEKL-ISRDYYTTL 104 (258)
T ss_dssp SHHHHHH----HHHHHTTSSCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCTTSCEEEECCCGGGTCSCC-CCHHHHHHH
T ss_pred CHHHHHH----HHHHHhhcCCCEEEEeeccccccCCHHHHHHHHHHHHHhcCCCCEEEEEechhhCCCCC-CCHHHHHHH
Confidence 5666654 4556677899988 7888899999999888888764469999998654 344432 221 1122
Q ss_pred HHHhhcCCCceEEEEcCCCh-hhhHHHHHHHHh
Q 021144 234 ASIADSCEQVVAVGINCTSP-RFIHGLILSVRK 265 (317)
Q Consensus 234 ~~~~~~~~~~~aiGvNC~~p-~~~~~~l~~l~~ 265 (317)
...+.....++.|=+--..+ +.+..+++..++
T Consensus 105 l~~~~~~~~~d~iDvEl~~~~~~~~~l~~~a~~ 137 (258)
T 4h3d_A 105 NKEISNTGLVDLIDVELFMGDEVIDEVVNFAHK 137 (258)
T ss_dssp HHHHHHTTCCSEEEEEGGGCHHHHHHHHHHHHH
T ss_pred HHHHHhcCCchhhHHhhhccHHHHHHHHHHHHh
Confidence 22232223466666665533 444445444443
No 108
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=80.36 E-value=6 Score=34.41 Aligned_cols=99 Identities=18% Similarity=0.222 Sum_probs=55.6
Q ss_pred HHHHHHhCCCCEEEecc--CCCHHHHHHHHHHHHHhCCCccEEEEEEEc--CC---Cccc-----CCCcHHHHHHHhhcC
Q 021144 173 RVLILANSGADLIAFET--IPNKLEAKAYAELLEEEGITIPAWFSFNSK--DG---INVV-----SGDSILECASIADSC 240 (317)
Q Consensus 173 qi~~l~~~gvD~l~~ET--~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~--~~---~~l~-----~G~~l~~a~~~~~~~ 240 (317)
+++.+.+.|+|.+.+-+ +++... +.++.+..+ ...+.+++.+. ++ -.+. ++.+..+.++.+.+
T Consensus 88 ~~~~~~~~Gad~V~lg~~~l~~p~~---~~~~~~~~g-~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~- 162 (253)
T 1thf_D 88 TASELILRGADKVSINTAAVENPSL---ITQIAQTFG-SQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEK- 162 (253)
T ss_dssp HHHHHHHTTCSEEEESHHHHHCTHH---HHHHHHHHC-GGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHH-
T ss_pred HHHHHHHcCCCEEEEChHHHhChHH---HHHHHHHcC-CCcEEEEEEEEccCCcEEEEECCCccccCCCHHHHHHHHHH-
Confidence 46666678999998765 333333 333444444 12355566553 11 0111 12355666666654
Q ss_pred CCceEEEEcCCChhh-----hHHHHHHHHhhCCCcEEEEeCCC
Q 021144 241 EQVVAVGINCTSPRF-----IHGLILSVRKVTSKPVIIYPNSG 278 (317)
Q Consensus 241 ~~~~aiGvNC~~p~~-----~~~~l~~l~~~~~~pl~vyPNaG 278 (317)
.++..|.++...+.. -..+++++++..+.|+++ ++|
T Consensus 163 ~G~~~i~~~~~~~~g~~~g~~~~~~~~l~~~~~ipvia--~GG 203 (253)
T 1thf_D 163 RGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIA--SGG 203 (253)
T ss_dssp TTCSEEEEEETTTTTSCSCCCHHHHHHHGGGCCSCEEE--ESC
T ss_pred CCCCEEEEEeccCCCCCCCCCHHHHHHHHHhcCCCEEE--ECC
Confidence 477788887644322 256778888877888665 455
No 109
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=80.20 E-value=14 Score=34.81 Aligned_cols=66 Identities=6% Similarity=0.003 Sum_probs=42.3
Q ss_pred HHHHHHHHhCCCCEEEecc-CCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEE
Q 021144 171 RRRVLILANSGADLIAFET-IPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGI 248 (317)
Q Consensus 171 ~~qi~~l~~~gvD~l~~ET-~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGv 248 (317)
.++++.+.++|+|++.+-+ ..+......+++.+++..+++|+++. .+.+++++....+ .++++|.+
T Consensus 155 ~~~a~~~~~~G~d~i~i~~~~g~~~~~~e~i~~ir~~~~~~pviv~----------~v~~~~~a~~a~~--~Gad~I~v 221 (404)
T 1eep_A 155 IERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKTKYPNLDLIAG----------NIVTKEAALDLIS--VGADCLKV 221 (404)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTCEEEEE----------EECSHHHHHHHHT--TTCSEEEE
T ss_pred HHHHHHHHHCCCCEEEEeCCCCChHHHHHHHHHHHHHCCCCeEEEc----------CCCcHHHHHHHHh--cCCCEEEE
Confidence 3456677889999998743 33334566667777775325899872 2334565554443 47888888
No 110
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=79.90 E-value=12 Score=31.74 Aligned_cols=92 Identities=12% Similarity=0.098 Sum_probs=52.9
Q ss_pred HHHHHHhCCCCEEEeccCC--CH-HHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEc
Q 021144 173 RVLILANSGADLIAFETIP--NK-LEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGIN 249 (317)
Q Consensus 173 qi~~l~~~gvD~l~~ET~p--~~-~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvN 249 (317)
+++.+.+.|+|.+.+-+.. +. .....+++.+++..++.+++++. .+++++.+..+ .+++.|+++
T Consensus 80 ~i~~~~~~Gad~v~l~~~~~~~p~~~~~~~i~~~~~~~~~~~v~~~~-----------~t~~e~~~~~~--~G~d~i~~~ 146 (223)
T 1y0e_A 80 EVDELIESQCEVIALDATLQQRPKETLDELVSYIRTHAPNVEIMADI-----------ATVEEAKNAAR--LGFDYIGTT 146 (223)
T ss_dssp HHHHHHHHTCSEEEEECSCSCCSSSCHHHHHHHHHHHCTTSEEEEEC-----------SSHHHHHHHHH--TTCSEEECT
T ss_pred HHHHHHhCCCCEEEEeeecccCcccCHHHHHHHHHHhCCCceEEecC-----------CCHHHHHHHHH--cCCCEEEeC
Confidence 4555677899999876642 11 12345566666652347776432 24666655433 478899886
Q ss_pred CCC-----h-----hhhHHHHHHHHhhCCCcEEEEeCCCC
Q 021144 250 CTS-----P-----RFIHGLILSVRKVTSKPVIIYPNSGE 279 (317)
Q Consensus 250 C~~-----p-----~~~~~~l~~l~~~~~~pl~vyPNaG~ 279 (317)
..+ . ..-...++++++..+.|++ .++|-
T Consensus 147 ~~g~t~~~~~~~~~~~~~~~~~~~~~~~~ipvi--a~GGI 184 (223)
T 1y0e_A 147 LHGYTSYTQGQLLYQNDFQFLKDVLQSVDAKVI--AEGNV 184 (223)
T ss_dssp TTTSSTTSTTCCTTHHHHHHHHHHHHHCCSEEE--EESSC
T ss_pred CCcCcCCCCCCCCCcccHHHHHHHHhhCCCCEE--EecCC
Confidence 421 1 1113466777776677754 55553
No 111
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=79.82 E-value=32 Score=30.65 Aligned_cols=28 Identities=14% Similarity=0.265 Sum_probs=24.9
Q ss_pred CCChHHHHHHHHHHHHhhcccccccccc
Q 021144 51 VSSPHLVRKVHLDYLDAGANIIITASYQ 78 (317)
Q Consensus 51 l~~Pe~V~~iH~~Yl~AGAdiI~TnTy~ 78 (317)
.+++|...++-+.--++||+++.--||.
T Consensus 33 ~~~~e~a~~~a~~l~~~Ga~~vk~~~fk 60 (262)
T 1zco_A 33 IESREQIMKVAEFLAEVGIKVLRGGAFK 60 (262)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEECBSSC
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEEecc
Confidence 6789999999899999999999988885
No 112
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=79.22 E-value=22 Score=31.57 Aligned_cols=107 Identities=15% Similarity=0.168 Sum_probs=63.2
Q ss_pred CCHHHHHHHHHHHHHHHHhCC-CCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhc
Q 021144 161 VSLETLKEFHRRRVLILANSG-ADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADS 239 (317)
Q Consensus 161 ~s~~el~~~h~~qi~~l~~~g-vD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~ 239 (317)
.+.++..+. ++..++.| +|++=+|-...- ..+.+++.+++.+ ..+++|+.--+ .+++-+.+.+.+..+..
T Consensus 97 ~~~~~~~~l----l~~~~~~g~~d~iDvEl~~~~-~~~~l~~~~~~~~--~kvI~S~Hdf~--~tP~~~el~~~~~~~~~ 167 (257)
T 2yr1_A 97 LNEAEVRRL----IEAICRSGAIDLVDYELAYGE-RIADVRRMTEECS--VWLVVSRHYFD--GTPRKETLLADMRQAER 167 (257)
T ss_dssp SCHHHHHHH----HHHHHHHTCCSEEEEEGGGTT-HHHHHHHHHHHTT--CEEEEEEEESS--CCCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHH----HHHHHHcCCCCEEEEECCCCh-hHHHHHHHHHhCC--CEEEEEecCCC--CCcCHHHHHHHHHHHHh
Confidence 355554444 44455556 999999964332 5666676666644 88999995322 12222234444444443
Q ss_pred CCCceEEEEcCC--ChhhhHHHHHHHH---hhCCCcEEEEeCC
Q 021144 240 CEQVVAVGINCT--SPRFIHGLILSVR---KVTSKPVIIYPNS 277 (317)
Q Consensus 240 ~~~~~aiGvNC~--~p~~~~~~l~~l~---~~~~~pl~vyPNa 277 (317)
.+++.+=+-+. +++.+..+++... ...+.|++.+.-+
T Consensus 168 -~gaDivKia~~a~s~~D~l~ll~~~~~~~~~~~~P~I~~~MG 209 (257)
T 2yr1_A 168 -YGADIAKVAVMPKSPEDVLVLLQATEEARRELAIPLITMAMG 209 (257)
T ss_dssp -TTCSEEEEEECCSSHHHHHHHHHHHHHHHHHCSSCEEEEECT
T ss_pred -cCCCEEEEEeccCCHHHHHHHHHHHHHHhccCCCCEEEEECC
Confidence 46666666654 5677777775433 3357899888665
No 113
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=79.07 E-value=15 Score=32.07 Aligned_cols=29 Identities=24% Similarity=0.376 Sum_probs=25.3
Q ss_pred CCChHHHHHHHHHHHHhhccccccccccc
Q 021144 51 VSSPHLVRKVHLDYLDAGANIIITASYQA 79 (317)
Q Consensus 51 l~~Pe~V~~iH~~Yl~AGAdiI~TnTy~a 79 (317)
.+-|+.+...-+.|.++|||+|+.+.|..
T Consensus 74 ~DipnTv~~~~~~~~~~gad~vtvh~~~G 102 (228)
T 3m47_A 74 ADIPETNEKICRATFKAGADAIIVHGFPG 102 (228)
T ss_dssp CSCHHHHHHHHHHHHHTTCSEEEEESTTC
T ss_pred cccHhHHHHHHHHHHhCCCCEEEEeccCC
Confidence 47899999999999999999998887753
No 114
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=79.02 E-value=21 Score=32.31 Aligned_cols=91 Identities=18% Similarity=0.134 Sum_probs=53.7
Q ss_pred HHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcC------CCcccCCCcHHH---HHHHhh--cCCCc
Q 021144 175 LILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKD------GINVVSGDSILE---CASIAD--SCEQV 243 (317)
Q Consensus 175 ~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~------~~~l~~G~~l~~---a~~~~~--~~~~~ 243 (317)
..|.++|++.+-+|--. +....++.+.+.+ +|++-.+-+.+ ++...-|.+-++ +++.+. +..++
T Consensus 113 ~rl~kaGa~aVklEdg~---~~~~~i~~l~~~G--Ipv~gHlgltPq~~~~~gg~~vqgrt~~~a~~~i~rA~a~~eAGA 187 (275)
T 3vav_A 113 VKLMRAGAQMVKFEGGE---WLAETVRFLVERA--VPVCAHVGLTPQSVHAFGGFKVQGKTEAGAAQLLRDARAVEEAGA 187 (275)
T ss_dssp HHHHHTTCSEEEEECCG---GGHHHHHHHHHTT--CCEEEEEESCGGGHHHHC---CCCCSHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCEEEECCch---hHHHHHHHHHHCC--CCEEEecCCCceEEeccCCeEEEcCCHHHHHHHHHHHHHHHHcCC
Confidence 34555799999999654 3344455566655 89987765432 122234544332 222221 12588
Q ss_pred eEEEEcCCChhhhHHHHHHHHhhCCCcEEEE
Q 021144 244 VAVGINCTSPRFIHGLILSVRKVTSKPVIIY 274 (317)
Q Consensus 244 ~aiGvNC~~p~~~~~~l~~l~~~~~~pl~vy 274 (317)
++|=+-|...+ +++.+.+..+.|++-.
T Consensus 188 ~~ivlE~vp~~----~a~~It~~l~iP~igI 214 (275)
T 3vav_A 188 QLIVLEAVPTL----VAAEVTRELSIPTIGI 214 (275)
T ss_dssp SEEEEESCCHH----HHHHHHHHCSSCEEEE
T ss_pred CEEEecCCCHH----HHHHHHHhCCCCEEEE
Confidence 99999998533 4556666678897654
No 115
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=78.84 E-value=16 Score=35.61 Aligned_cols=66 Identities=14% Similarity=0.105 Sum_probs=43.6
Q ss_pred HHHHHHHHhCCCCEEEeccC-CCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEE
Q 021144 171 RRRVLILANSGADLIAFETI-PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGI 248 (317)
Q Consensus 171 ~~qi~~l~~~gvD~l~~ET~-p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGv 248 (317)
.++++.+.++|+|+|.+-+- ++.......++.+++..+++|+++.. ..+.+++....+ .++++|-+
T Consensus 231 ~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~~~p~~~Vi~g~----------v~t~e~a~~l~~--aGaD~I~v 297 (490)
T 4avf_A 231 GERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQVIGGN----------IATAEAAKALAE--AGADAVKV 297 (490)
T ss_dssp HHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHHHCTTSEEEEEE----------ECSHHHHHHHHH--TTCSEEEE
T ss_pred HHHHHHHhhcccceEEecccCCcchhHHHHHHHHHHHCCCceEEEee----------eCcHHHHHHHHH--cCCCEEEE
Confidence 45788899999999988643 33344555666666654468988732 234555555444 47888888
No 116
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=78.68 E-value=9.8 Score=36.31 Aligned_cols=65 Identities=11% Similarity=0.155 Sum_probs=42.6
Q ss_pred HHHHHHHhCCCCEEEeccCC-CHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEc
Q 021144 172 RRVLILANSGADLIAFETIP-NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGIN 249 (317)
Q Consensus 172 ~qi~~l~~~gvD~l~~ET~p-~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvN 249 (317)
++++.++++|||+|.+.|-. +.......++.+++.. +.|+++.- -.+.+++....+ .++++|.+.
T Consensus 147 e~~~~lveaGvdvIvldta~G~~~~~~e~I~~ik~~~-~i~Vi~g~----------V~t~e~A~~a~~--aGAD~I~vG 212 (400)
T 3ffs_A 147 ERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKM-NIDVIVGN----------VVTEEATKELIE--NGADGIKVG 212 (400)
T ss_dssp HHHHHHHHHTCSEEEECCSCCSBHHHHHHHHHHHTTC-CCEEEEEE----------ECSHHHHHHHHH--TTCSEEEEC
T ss_pred HHHHHHHHcCCCEEEEeCCCCCcccHHHHHHHHHhcC-CCeEEEee----------cCCHHHHHHHHH--cCCCEEEEe
Confidence 57889999999999987543 3334455566666653 58888631 134566655554 478888774
No 117
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=78.64 E-value=39 Score=30.77 Aligned_cols=149 Identities=17% Similarity=0.113 Sum_probs=85.0
Q ss_pred ChHHHHHHHHHHHHhhcccccc-ccccccHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCC
Q 021144 53 SPHLVRKVHLDYLDAGANIIIT-ASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (317)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~T-nTy~as~~~l~~~g~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (317)
+.+.+++.-+.++++|.+-|.. -|-+=. .-++.+|-.++++.+++.+. +
T Consensus 42 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~------~~Ls~~Er~~v~~~~v~~~~------------------------g 91 (314)
T 3qze_A 42 DWDSLAKLVDFHLQEGTNAIVAVGTTGES------ATLDVEEHIQVIRRVVDQVK------------------------G 91 (314)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEESSGGGTG------GGCCHHHHHHHHHHHHHHHT------------------------T
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCh------hhCCHHHHHHHHHHHHHHhC------------------------C
Confidence 4567888888889999995443 333311 13466677777777766542 2
Q ss_pred CCeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEecc----CCCHHHHHHHHHHHHHhC
Q 021144 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFET----IPNKLEAKAYAELLEEEG 207 (317)
Q Consensus 132 ~~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~ET----~p~~~Ea~a~~~~~~~~~ 207 (317)
+-+.|+| +|. .+.++..+ +++...+.|+|.+++=+ -|+.+++..-.+.+.+..
T Consensus 92 rvpViaG-vg~------------------~st~eai~----la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~ 148 (314)
T 3qze_A 92 RIPVIAG-TGA------------------NSTREAVA----LTEAAKSGGADACLLVTPYYNKPTQEGMYQHFRHIAEAV 148 (314)
T ss_dssp SSCEEEE-CCC------------------SSHHHHHH----HHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHS
T ss_pred CCcEEEe-CCC------------------cCHHHHHH----HHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhc
Confidence 2345666 332 14444443 56667779999998765 256677776666665543
Q ss_pred CCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCC--ChhhhHHHHH
Q 021144 208 ITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCT--SPRFIHGLIL 261 (317)
Q Consensus 208 ~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~--~p~~~~~~l~ 261 (317)
++|+++== + .+++...-+++...+.+ +.++ .+||--+ ....+..+++
T Consensus 149 -~lPiilYn-~--P~~tg~~l~~~~~~~La-~~pn--IvgiKdssgd~~~~~~~~~ 197 (314)
T 3qze_A 149 -AIPQILYN-V--PGRTSCDMLPETVERLS-KVPN--IIGIKEATGDLQRAKEVIE 197 (314)
T ss_dssp -CSCEEEEE-C--HHHHSCCCCHHHHHHHH-TSTT--EEEEEECSCCHHHHHHHHH
T ss_pred -CCCEEEEe-C--ccccCCCCCHHHHHHHh-cCCC--EEEEEcCCCCHHHHHHHHH
Confidence 69998532 1 12222233455555544 4445 4555544 3444444443
No 118
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=78.48 E-value=18 Score=35.08 Aligned_cols=68 Identities=16% Similarity=0.181 Sum_probs=45.4
Q ss_pred HHHHHHHHhCCCCEEEeccCC-CHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEc
Q 021144 171 RRRVLILANSGADLIAFETIP-NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGIN 249 (317)
Q Consensus 171 ~~qi~~l~~~gvD~l~~ET~p-~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvN 249 (317)
.++++.+.++|+|.|.+-+.. +.......++.+++..+++|+++. .+.+.+++....+ .++++|-+.
T Consensus 239 ~~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~~p~~pvi~g----------~~~t~e~a~~l~~--~G~d~I~v~ 306 (494)
T 1vrd_A 239 MERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKADYPDLPVVAG----------NVATPEGTEALIK--AGADAVKVG 306 (494)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTSCEEEE----------EECSHHHHHHHHH--TTCSEEEEC
T ss_pred HHHHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHHHCCCceEEeC----------CcCCHHHHHHHHH--cCCCEEEEc
Confidence 457888999999999885532 334455666667765435898862 2556777755444 478888774
Q ss_pred C
Q 021144 250 C 250 (317)
Q Consensus 250 C 250 (317)
.
T Consensus 307 ~ 307 (494)
T 1vrd_A 307 V 307 (494)
T ss_dssp S
T ss_pred C
Confidence 3
No 119
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=78.19 E-value=17 Score=33.99 Aligned_cols=52 Identities=17% Similarity=0.355 Sum_probs=35.5
Q ss_pred CCChHHHHHHHHHHHHhhcccccccccc--ccHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 021144 51 VSSPHLVRKVHLDYLDAGANIIITASYQ--ATIQGFEAKGFSTEEAEALLRRSVEIACEAREIY 112 (317)
Q Consensus 51 l~~Pe~V~~iH~~Yl~AGAdiI~TnTy~--as~~~l~~~g~~~~~~~~l~~~av~lAr~A~~~~ 112 (317)
++++|.+.++-+.--++||+++..-+|. .++.+++ |+. ..+.++.+++++++
T Consensus 116 ~es~e~a~~~a~~~k~aGa~~vr~q~fKprTs~~~f~--glg--------~egl~~l~~~~~e~ 169 (350)
T 1vr6_A 116 VEGREMLMETAHFLSELGVKVLRGGAYKPRTSPYSFQ--GLG--------EKGLEYLREAADKY 169 (350)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEECBSCCCCCSTTSCC--CCT--------HHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCCeeeeeEEeCCCChHhhc--CCC--------HHHHHHHHHHHHHc
Confidence 5789999999999999999999887776 3333321 443 24455556665543
No 120
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=77.06 E-value=41 Score=30.16 Aligned_cols=150 Identities=18% Similarity=0.116 Sum_probs=84.6
Q ss_pred ChHHHHHHHHHHHHhhccccc-cccccccHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCC
Q 021144 53 SPHLVRKVHLDYLDAGANIII-TASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (317)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~-TnTy~as~~~l~~~g~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (317)
+.+.+++.-+.++++|++-|. .-|-+=. .-++.+|-.++++.+++.+. +
T Consensus 20 D~~~l~~lv~~li~~Gv~gl~~~GttGE~------~~Ls~~Er~~v~~~~~~~~~------------------------g 69 (291)
T 3tak_A 20 DWKSLEKLVEWHIEQGTNSIVAVGTTGEA------STLSMEEHTQVIKEIIRVAN------------------------K 69 (291)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEESSTTTTG------GGSCHHHHHHHHHHHHHHHT------------------------T
T ss_pred CHHHHHHHHHHHHHCCCCEEEECcccccc------ccCCHHHHHHHHHHHHHHhC------------------------C
Confidence 457788888888999999543 3333311 12465666677776665442 2
Q ss_pred CCeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEecc----CCCHHHHHHHHHHHHHhC
Q 021144 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFET----IPNKLEAKAYAELLEEEG 207 (317)
Q Consensus 132 ~~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~ET----~p~~~Ea~a~~~~~~~~~ 207 (317)
+-+.|+| +|. .+.++..+ +++...+.|+|.+++=+ -|+.+++..-.+.+.+..
T Consensus 70 r~pviaG-vg~------------------~~t~~ai~----la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~ 126 (291)
T 3tak_A 70 RIPIIAG-TGA------------------NSTREAIE----LTKAAKDLGADAALLVTPYYNKPTQEGLYQHYKAIAEAV 126 (291)
T ss_dssp SSCEEEE-CCC------------------SSHHHHHH----HHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC
T ss_pred CCeEEEe-CCC------------------CCHHHHHH----HHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhc
Confidence 2345666 332 13444443 45666778999998764 246677766666665543
Q ss_pred CCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCC--ChhhhHHHHHH
Q 021144 208 ITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCT--SPRFIHGLILS 262 (317)
Q Consensus 208 ~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~--~p~~~~~~l~~ 262 (317)
++|+++== + .+++--.-+++...+.+ +.++ .+||--+ ....+..+++.
T Consensus 127 -~lPiilYn-~--P~~tg~~l~~~~~~~La-~~pn--ivgiK~ssgd~~~~~~~~~~ 176 (291)
T 3tak_A 127 -ELPLILYN-V--PGRTGVDLSNDTAVRLA-EIPN--IVGIKDATGDVPRGKALIDA 176 (291)
T ss_dssp -CSCEEEEE-C--HHHHSCCCCHHHHHHHT-TSTT--EEEEEECSCCHHHHHHHHHH
T ss_pred -CCCEEEEe-c--ccccCCCCCHHHHHHHH-cCCC--EEEEEeCCCCHHHHHHHHHH
Confidence 69998521 2 12222233455444444 4444 5566544 44555555543
No 121
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=76.41 E-value=15 Score=31.82 Aligned_cols=93 Identities=24% Similarity=0.311 Sum_probs=54.9
Q ss_pred HHHHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhc-CCCceEEEEc
Q 021144 171 RRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADS-CEQVVAVGIN 249 (317)
Q Consensus 171 ~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~-~~~~~aiGvN 249 (317)
.+.++.+.++|+|.+.+-+++. .+.+.+++.+++.+ .++++.++. .++. +.++.+.. ..+...+ +.
T Consensus 98 ~~~~~~~~~~Gad~v~~~~~~~-~~~~~~~~~~~~~g--~~~~~~i~~--------~t~~-e~~~~~~~~~d~~i~~-~~ 164 (248)
T 1geq_A 98 RNFLAEAKASGVDGILVVDLPV-FHAKEFTEIAREEG--IKTVFLAAP--------NTPD-ERLKVIDDMTTGFVYL-VS 164 (248)
T ss_dssp HHHHHHHHHHTCCEEEETTCCG-GGHHHHHHHHHHHT--CEEEEEECT--------TCCH-HHHHHHHHHCSSEEEE-EC
T ss_pred HHHHHHHHHCCCCEEEECCCCh-hhHHHHHHHHHHhC--CCeEEEECC--------CCHH-HHHHHHHhcCCCeEEE-EE
Confidence 3467778889999999998875 56777888888876 566665521 2233 34433332 2223323 21
Q ss_pred C---CC-----hhhhHHHHHHHHhhCCCcEEEEeCCC
Q 021144 250 C---TS-----PRFIHGLILSVRKVTSKPVIIYPNSG 278 (317)
Q Consensus 250 C---~~-----p~~~~~~l~~l~~~~~~pl~vyPNaG 278 (317)
. ++ +......++++++..+.|+ .+-+|
T Consensus 165 ~~G~~g~~~~~~~~~~~~i~~l~~~~~~pi--~~~GG 199 (248)
T 1geq_A 165 LYGTTGAREEIPKTAYDLLRRAKRICRNKV--AVGFG 199 (248)
T ss_dssp CC-------CCCHHHHHHHHHHHHHCSSCE--EEESC
T ss_pred CCccCCCCCCCChhHHHHHHHHHhhcCCCE--EEEee
Confidence 1 11 1234567788887777775 44555
No 122
>2uwf_A Endoxylanase, alkaline active endoxylanase; hydrolase, xylan degradation, xylanase structure, glycosidase, alkaliphilic; 2.10A {Bacillus halodurans} PDB: 2f8q_A 2fgl_A*
Probab=76.36 E-value=17 Score=33.91 Aligned_cols=50 Identities=16% Similarity=0.161 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHhCC--CCEEEecc-----CCCHHHHHHHHHHHHHhCCCccEEEE-EEEc
Q 021144 168 EFHRRRVLILANSG--ADLIAFET-----IPNKLEAKAYAELLEEEGITIPAWFS-FNSK 219 (317)
Q Consensus 168 ~~h~~qi~~l~~~g--vD~l~~ET-----~p~~~Ea~a~~~~~~~~~~~~pv~iS-f~~~ 219 (317)
+.+...++.|.+.| +|.|-+.. .|+..+++.+++.+.+.+ +||+|| +.+.
T Consensus 202 ~~~~~~v~~l~~~G~~idgiG~Q~H~~~~~p~~~~~~~~l~~~a~~G--l~i~iTElDi~ 259 (356)
T 2uwf_A 202 DDLYNLVKDLLEQGVPIDGVGHQSHIQIGWPSIEDTRASFEKFTSLG--LDNQVTELDMS 259 (356)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEEESSCSCHHHHHHHHHHHHTTT--CEEEEEEEEEE
T ss_pred HHHHHHHHHHHHCCCcccEEEEEEecCCCCCCHHHHHHHHHHHHhcC--CcEEEEecccc
Confidence 44556788887778 59998754 378999999998888776 999998 4443
No 123
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=76.33 E-value=58 Score=32.19 Aligned_cols=66 Identities=14% Similarity=0.052 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHhCCCCEEEec-cC--CCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhh
Q 021144 168 EFHRRRVLILANSGADLIAFE-TI--PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIAD 238 (317)
Q Consensus 168 ~~h~~qi~~l~~~gvD~l~~E-T~--p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~ 238 (317)
+++.+.++.+.+.|+|.|.+= |. ....++..+++.+++.-+ ..+.+++-+.++ .|..+..++..+.
T Consensus 175 e~~~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p-~~i~I~~H~Hnd----~GlAvAN~laAve 243 (539)
T 1rqb_A 175 EGYVKLAGQLLDMGADSIALKDMAALLKPQPAYDIIKAIKDTYG-QKTQINLHCHST----TGVTEVSLMKAIE 243 (539)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHHC-TTCCEEEEEBCT----TSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEeCCCCCCcCHHHHHHHHHHHHHhcC-CCceEEEEeCCC----CChHHHHHHHHHH
Confidence 467778888999999998664 43 358888899998887421 135567777664 3555655555554
No 124
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=76.04 E-value=31 Score=32.16 Aligned_cols=65 Identities=11% Similarity=0.147 Sum_probs=42.2
Q ss_pred HHHHHHHHhCCCCEEEeccCC-CHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEE
Q 021144 171 RRRVLILANSGADLIAFETIP-NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGI 248 (317)
Q Consensus 171 ~~qi~~l~~~gvD~l~~ET~p-~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGv 248 (317)
.++++.++++|+|+|.+.+-. +.......++.+++.. +.|+++... .+.+++....+ .++++|.+
T Consensus 107 ~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~~~-~~~Vivg~v----------~t~e~A~~l~~--aGaD~I~V 172 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKM-NIDVIVGNV----------VTEEATKELIE--NGADGIKV 172 (361)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHHHC-CCEEEEEEE----------CSHHHHHHHHH--TTCSEEEE
T ss_pred HHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHHhc-CCcEEEccC----------CCHHHHHHHHH--cCcCEEEE
Confidence 457888999999999886544 3344445566666653 589987321 34555555444 47788777
No 125
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A*
Probab=75.84 E-value=55 Score=31.00 Aligned_cols=112 Identities=14% Similarity=0.157 Sum_probs=63.1
Q ss_pred CCHHHHHHH----HHHHHHHHHhCCCCE--E--EeccCC------CHHH----HHHHHHHHHHhCCCccEEEEEEEcCCC
Q 021144 161 VSLETLKEF----HRRRVLILANSGADL--I--AFETIP------NKLE----AKAYAELLEEEGITIPAWFSFNSKDGI 222 (317)
Q Consensus 161 ~s~~el~~~----h~~qi~~l~~~gvD~--l--~~ET~p------~~~E----a~a~~~~~~~~~~~~pv~iSf~~~~~~ 222 (317)
.+.+++.+. =+..++.|.+.|++. + .-|+-. +.+. +++++.++|+..++.+|++.+....+
T Consensus 130 ~~~~~l~~~~~~yt~~~l~~l~~~g~~~~~vqvGNEi~~g~~~~~~~~~la~ll~ag~~aVR~v~p~~~V~ih~~~~~~- 208 (399)
T 1ur4_A 130 LNFEDKKTALYQYTKQSLKAMKAAGIDIGMVQVGNETNGGLAGETDWAKMSQLFNAGSQAVRETDSNILVALHFTNPET- 208 (399)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEESSSCSSCBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEEECCTTS-
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEccccccccCCcccHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCCcc-
Confidence 466665543 345677777777654 3 235432 2333 44556778887767788877643221
Q ss_pred cccCCCcHHHHHHHhh-cCCCceEEEEcCCC-----hhhhHHHHHHHHhhCCCcEEE----EeCC
Q 021144 223 NVVSGDSILECASIAD-SCEQVVAVGINCTS-----PRFIHGLILSVRKVTSKPVII----YPNS 277 (317)
Q Consensus 223 ~l~~G~~l~~a~~~~~-~~~~~~aiGvNC~~-----p~~~~~~l~~l~~~~~~pl~v----yPNa 277 (317)
-..+...+..+. .....|.||+|+=. ...+...|+.+.+..++|++| ||..
T Consensus 209 ----~~~~~~~~d~l~~~g~d~DvIG~syYp~W~~~l~~l~~~l~~l~~rygKpV~v~EtG~~~~ 269 (399)
T 1ur4_A 209 ----SGRYAWIAETLHRHHVDYDVFASSYYPFWHGTLKNLTSVLTSVADTYGKKVMVAETSYTYT 269 (399)
T ss_dssp ----TTHHHHHHHHHHHTTCCCSEEEEEECTTTSCCHHHHHHHHHHHHHHHCCEEEEEEECCCSC
T ss_pred ----hHHHHHHHHHHHHcCCCcCeEeEecCccchhhHHHHHHHHHHHHHHhCCcEEEEEecCCcc
Confidence 112222223332 22458999999843 234555666665555899765 5654
No 126
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=75.67 E-value=14 Score=33.36 Aligned_cols=102 Identities=10% Similarity=0.042 Sum_probs=61.3
Q ss_pred HHHHHhCCCCEEEeccCCC-H--------------HHHHHHHHHHHHhCCCccEEEEE----EEcCCCcccCCCcHHHHH
Q 021144 174 VLILANSGADLIAFETIPN-K--------------LEAKAYAELLEEEGITIPAWFSF----NSKDGINVVSGDSILECA 234 (317)
Q Consensus 174 i~~l~~~gvD~l~~ET~p~-~--------------~Ea~a~~~~~~~~~~~~pv~iSf----~~~~~~~l~~G~~l~~a~ 234 (317)
++...++|+|.+-+=.-.+ . +.++.+++.+++.+ ++|-+.+ .+++.++. +=.-+.+.+
T Consensus 86 i~~a~~ag~~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G--~~v~~~l~~~~~~~~~~~~-~~~~~~~~~ 162 (298)
T 2cw6_A 86 FEAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSAN--ISVRGYVSCALGCPYEGKI-SPAKVAEVT 162 (298)
T ss_dssp HHHHHHTTCSEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTT--CEEEEEEETTTCBTTTBSC-CHHHHHHHH
T ss_pred HHHHHHCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCC--CeEEEEEEEEeeCCcCCCC-CHHHHHHHH
Confidence 5666778999886643222 1 35566677788876 5554433 33443332 112233344
Q ss_pred HHhhcCCCceEEEEcC----CChhhhHHHHHHHHhhC-CCcEEEEe--CCCC
Q 021144 235 SIADSCEQVVAVGINC----TSPRFIHGLILSVRKVT-SKPVIIYP--NSGE 279 (317)
Q Consensus 235 ~~~~~~~~~~aiGvNC----~~p~~~~~~l~~l~~~~-~~pl~vyP--NaG~ 279 (317)
+.+.+ .+++.|.+.= ..|..+..+++.+++.. +.||.+.. |.|.
T Consensus 163 ~~~~~-~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~i~~H~Hn~~Gl 213 (298)
T 2cw6_A 163 KKFYS-MGCYEISLGDTIGVGTPGIMKDMLSAVMQEVPLAALAVHCHDTYGQ 213 (298)
T ss_dssp HHHHH-TTCSEEEEEETTSCCCHHHHHHHHHHHHHHSCGGGEEEEEBCTTSC
T ss_pred HHHHH-cCCCEEEecCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCCch
Confidence 44444 4777766653 35999999999998876 46787765 4553
No 127
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=75.48 E-value=6.1 Score=36.52 Aligned_cols=67 Identities=18% Similarity=0.161 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHhCCCCEEEec-cC--CCHHHHHHHHHHHHHhCCCcc-EEEEEEEcCCCcccCCCcHHHHHHHhh
Q 021144 168 EFHRRRVLILANSGADLIAFE-TI--PNKLEAKAYAELLEEEGITIP-AWFSFNSKDGINVVSGDSILECASIAD 238 (317)
Q Consensus 168 ~~h~~qi~~l~~~gvD~l~~E-T~--p~~~Ea~a~~~~~~~~~~~~p-v~iSf~~~~~~~l~~G~~l~~a~~~~~ 238 (317)
+++.+.++.+.+.|+|.|.+- |+ -...++..+++.+++.-++.+ +.++|-+.++ .|..+..++..+.
T Consensus 151 ~~~~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~~~~i~~H~Hnd----~GlA~AN~laA~~ 221 (325)
T 3eeg_A 151 AFLARMVEAVIEAGADVVNIPDTTGYMLPWQYGERIKYLMDNVSNIDKAILSAHCHND----LGLATANSLAALQ 221 (325)
T ss_dssp HHHHHHHHHHHHHTCSEEECCBSSSCCCHHHHHHHHHHHHHHCSCGGGSEEEECBCCT----TSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEecCccCCcCHHHHHHHHHHHHHhCCCCCceEEEEEeCCC----CCHHHHHHHHHHH
Confidence 355566777888899998765 43 367888889988887532222 6778877664 4666666555554
No 128
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=75.21 E-value=49 Score=30.14 Aligned_cols=194 Identities=13% Similarity=0.032 Sum_probs=101.7
Q ss_pred ChHHHHHHHHHHHHhhcccccc-ccccccHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCC
Q 021144 53 SPHLVRKVHLDYLDAGANIIIT-ASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (317)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~T-nTy~as~~~l~~~g~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (317)
+.+.+++.-+.++++|.+-|.. -|-+=. .-++.+|-.++++.+++.+. +
T Consensus 41 D~~~l~~li~~li~~Gv~Gl~v~GtTGE~------~~Ls~~Er~~v~~~~v~~~~------------------------g 90 (315)
T 3si9_A 41 DEKAFCNFVEWQITQGINGVSPVGTTGES------PTLTHEEHKRIIELCVEQVA------------------------K 90 (315)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECSSTTTTG------GGSCHHHHHHHHHHHHHHHT------------------------T
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccCc------cccCHHHHHHHHHHHHHHhC------------------------C
Confidence 3467888888889999995543 332211 12455666777776665442 2
Q ss_pred CCeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEecc----CCCHHHHHHHHHHHHHhC
Q 021144 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFET----IPNKLEAKAYAELLEEEG 207 (317)
Q Consensus 132 ~~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~ET----~p~~~Ea~a~~~~~~~~~ 207 (317)
+-+.|+| +|. .+.++..+ +++...+.|+|.+++=+ -|+-+++..-.+.+.+..
T Consensus 91 rvpViaG-vg~------------------~st~~ai~----la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~ 147 (315)
T 3si9_A 91 RVPVVAG-AGS------------------NSTSEAVE----LAKHAEKAGADAVLVVTPYYNRPNQRGLYTHFSSIAKAI 147 (315)
T ss_dssp SSCBEEE-CCC------------------SSHHHHHH----HHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC
T ss_pred CCcEEEe-CCC------------------CCHHHHHH----HHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHcC
Confidence 2345666 332 14444443 56667779999998754 356677766666665543
Q ss_pred CCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCCChhhhHHHHHHHHhhCCCcEEEEeCC-CCccc---c
Q 021144 208 ITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPRFIHGLILSVRKVTSKPVIIYPNS-GETYN---A 283 (317)
Q Consensus 208 ~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~~p~~~~~~l~~l~~~~~~pl~vyPNa-G~~~d---~ 283 (317)
++|+++== + .+++--.-+++.+.+..++.+++.+|=--|.....+..+++.. +..+.+|.-. ....+ .
T Consensus 148 -~lPiilYn-~--P~~tg~~l~~~~~~~La~~~pnIvgiKdssgd~~~~~~l~~~~----~~~f~v~~G~d~~~l~~l~~ 219 (315)
T 3si9_A 148 -SIPIIIYN-I--PSRSVIDMAVETMRDLCRDFKNIIGVKDATGKIERASEQREKC----GKDFVQLSGDDCTALGFNAH 219 (315)
T ss_dssp -SSCEEEEE-C--HHHHSCCCCHHHHHHHHHHCTTEEEEEECSCCTHHHHHHHHHH----CSSSEEEESCGGGHHHHHHT
T ss_pred -CCCEEEEe-C--chhhCCCCCHHHHHHHHhhCCCEEEEEeCCCCHHHHHHHHHHc----CCCeEEEecCHHHHHHHHHc
Confidence 69988532 1 1222223345544454442455444433344445555554433 2224444322 11111 1
Q ss_pred ccccccc-cCCCChhhHHHHHHHHH
Q 021144 284 ELKKWVV-SFSLHFFPLELILNPFA 307 (317)
Q Consensus 284 ~~~~w~~-~~~~~~~~~~~~~~~w~ 307 (317)
....|.. ....-|+.+.+....|.
T Consensus 220 G~~G~is~~an~~P~~~~~l~~a~~ 244 (315)
T 3si9_A 220 GGVGCISVSSNVAPKLCAQLHAACL 244 (315)
T ss_dssp TCCEEEESGGGTCHHHHHHHHHHHH
T ss_pred CCCEEEecHHHhhHHHHHHHHHHHH
Confidence 1123322 22356777777666553
No 129
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=75.12 E-value=6.4 Score=33.78 Aligned_cols=101 Identities=20% Similarity=0.165 Sum_probs=53.7
Q ss_pred HHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCC-----CcccCC-----CcHHHHHHHhhcCCCc
Q 021144 174 VLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDG-----INVVSG-----DSILECASIADSCEQV 243 (317)
Q Consensus 174 i~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~-----~~l~~G-----~~l~~a~~~~~~~~~~ 243 (317)
++.+.+.|+|.+.+-+-. +.+...+.++.+..+ ...+.+++.+..+ -.+..| .+..+.++.+.+ .++
T Consensus 92 ~~~~~~~Gad~V~i~~~~-~~~~~~~~~~~~~~g-~~~i~~~~~~~~~~g~~~v~~~~~~~~~~~~~~e~~~~~~~-~G~ 168 (253)
T 1h5y_A 92 ATTLFRAGADKVSVNTAA-VRNPQLVALLAREFG-SQSTVVAIDAKWNGEYYEVYVKGGREATGLDAVKWAKEVEE-LGA 168 (253)
T ss_dssp HHHHHHHTCSEEEESHHH-HHCTHHHHHHHHHHC-GGGEEEEEEEEECSSSEEEEETTTTEEEEEEHHHHHHHHHH-HTC
T ss_pred HHHHHHcCCCEEEEChHH-hhCcHHHHHHHHHcC-CCcEEEEEEeecCCCcEEEEEeCCeecCCCCHHHHHHHHHh-CCC
Confidence 445556799999976521 222222334444444 1235556555421 111112 345555655554 367
Q ss_pred eEEEEcCCChhh-----hHHHHHHHHhhCCCcEEEEeCCCC
Q 021144 244 VAVGINCTSPRF-----IHGLILSVRKVTSKPVIIYPNSGE 279 (317)
Q Consensus 244 ~aiGvNC~~p~~-----~~~~l~~l~~~~~~pl~vyPNaG~ 279 (317)
+.|.++...+.. -...++.+++..+.|++ .++|-
T Consensus 169 d~i~~~~~~~~g~~~~~~~~~i~~l~~~~~~pvi--a~GGi 207 (253)
T 1h5y_A 169 GEILLTSIDRDGTGLGYDVELIRRVADSVRIPVI--ASGGA 207 (253)
T ss_dssp SEEEEEETTTTTTCSCCCHHHHHHHHHHCSSCEE--EESCC
T ss_pred CEEEEecccCCCCcCcCCHHHHHHHHHhcCCCEE--EeCCC
Confidence 888887654321 24567777777777865 45663
No 130
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=75.10 E-value=51 Score=30.31 Aligned_cols=130 Identities=16% Similarity=0.153 Sum_probs=81.3
Q ss_pred HHHHHHHHHHHHHHHhCCCCEEEeccC------------------CCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcc-
Q 021144 164 ETLKEFHRRRVLILANSGADLIAFETI------------------PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINV- 224 (317)
Q Consensus 164 ~el~~~h~~qi~~l~~~gvD~l~~ET~------------------p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l- 224 (317)
+.+.++|.++++ .|+=+|+.|-. ..+...+.+++++.+.+ .++++.+.= .|+.
T Consensus 39 ~~~~~~y~~rA~----gG~Glii~e~~~v~~~g~~~~~~~~i~~d~~i~~~~~~~~~vh~~G--~~i~~QL~H--~Gr~~ 110 (340)
T 3gr7_A 39 TWHKIHYPARAV----GQVGLIIVEATGVTPQGRISERDLGIWSDDHIAGLRELVGLVKEHG--AAIGIQLAH--AGRKS 110 (340)
T ss_dssp HHHHHHHHHHHH----TTCSEEEEEEEESSGGGCSSTTSEECSSTTHHHHHHHHHHHHHHTT--CEEEEEEEC--CGGGC
T ss_pred HHHHHHHHHHhc----CCceEEEEcceEecccccCCCCCcccCCHHHHHHHHHHHHHHHhCC--CeEEEEecc--CCCcc
Confidence 678889988776 67778877632 12345667778888766 667777632 1111
Q ss_pred -----------------------cCCCcH-------HHHHHHhhcCCCceEEEEcCCC---------h------------
Q 021144 225 -----------------------VSGDSI-------LECASIADSCEQVVAVGINCTS---------P------------ 253 (317)
Q Consensus 225 -----------------------~~G~~l-------~~a~~~~~~~~~~~aiGvNC~~---------p------------ 253 (317)
++-+.+ .++++.+.+ .+.++|=|||++ |
T Consensus 111 ~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~ii~~f~~aA~~a~~-aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGs 189 (340)
T 3gr7_A 111 QVPGEIIAPSAVPFDDSSPTPKEMTKADIEETVQAFQNGARRAKE-AGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGS 189 (340)
T ss_dssp CSSSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHH-HTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSS
T ss_pred CCCCCccCCCCccccCCCCCCccCCHHHHHHHHHHHHHHHHHHHH-cCCCEEEEccccchHHHHcCCCccCcCCCcccCC
Confidence 011112 223333333 489999999873 3
Q ss_pred -----hhhHHHHHHHHhhCCCcEEEEeCCCCccccccccccccCCCChhhHHHHHHHHHHccc
Q 021144 254 -----RFIHGLILSVRKVTSKPVIIYPNSGETYNAELKKWVVSFSLHFFPLELILNPFASCRL 311 (317)
Q Consensus 254 -----~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~w~~~~~~~~~~~~~~~~~w~~~~~ 311 (317)
..+..+++.+++..+.|++|.-+..+..+ . +.+.+++.+.++.+.+.|+
T Consensus 190 lenR~r~~~eiv~avr~~v~~pv~vRls~~~~~~---~------g~~~~~~~~la~~L~~~Gv 243 (340)
T 3gr7_A 190 PENRYRFLGEVIDAVREVWDGPLFVRISASDYHP---D------GLTAKDYVPYAKRMKEQGV 243 (340)
T ss_dssp HHHHHHHHHHHHHHHHHHCCSCEEEEEESCCCST---T------SCCGGGHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHhcCCceEEEeccccccC---C------CCCHHHHHHHHHHHHHcCC
Confidence 13466777788777899999887753211 1 2345678888888888873
No 131
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=74.97 E-value=46 Score=29.73 Aligned_cols=105 Identities=15% Similarity=0.191 Sum_probs=63.6
Q ss_pred ChHHHHHHHHHHHHhhcccccc-ccccccHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCC
Q 021144 53 SPHLVRKVHLDYLDAGANIIIT-ASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (317)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~T-nTy~as~~~l~~~g~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (317)
+.+.+++.-+.++++|.+-|.. -|-+=. .-++.+|-.++++.+++.+ .
T Consensus 17 D~~~l~~lv~~li~~Gv~gl~v~GttGE~------~~Ls~~Er~~v~~~~~~~~-------------------------~ 65 (286)
T 2r91_A 17 DPELFANHVKNITSKGVDVVFVAGTTGLG------PALSLQEKMELTDAATSAA-------------------------R 65 (286)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEETSTTTTG------GGSCHHHHHHHHHHHHHHC-------------------------S
T ss_pred CHHHHHHHHHHHHHCCCCEEEECccccCh------hhCCHHHHHHHHHHHHHHh-------------------------C
Confidence 4567888888889999995543 332211 1245566666666665432 1
Q ss_pred CCeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEeccC-----CCHHHHHHHHHHHHHh
Q 021144 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI-----PNKLEAKAYAELLEEE 206 (317)
Q Consensus 132 ~~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~ET~-----p~~~Ea~a~~~~~~~~ 206 (317)
. .|+| +|. .+.++..+ +++...+.|+|.+++=+= |+.+++..-.+.+.+.
T Consensus 66 -g-vi~G-vg~------------------~~t~~ai~----la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a 120 (286)
T 2r91_A 66 -R-VIVQ-VAS------------------LNADEAIA----LAKYAESRGAEAVASLPPYYFPRLSERQIAKYFRDLCSA 120 (286)
T ss_dssp -S-EEEE-CCC------------------SSHHHHHH----HHHHHHHTTCSEEEECCSCSSTTCCHHHHHHHHHHHHHH
T ss_pred -C-EEEe-eCC------------------CCHHHHHH----HHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHh
Confidence 2 6676 232 14444443 566677789999987543 5667766666665554
Q ss_pred CCCccEEE
Q 021144 207 GITIPAWF 214 (317)
Q Consensus 207 ~~~~pv~i 214 (317)
. ++|+++
T Consensus 121 ~-~lPiil 127 (286)
T 2r91_A 121 V-SIPVFL 127 (286)
T ss_dssp C-SSCEEE
T ss_pred c-CCCEEE
Confidence 3 589884
No 132
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=74.85 E-value=13 Score=32.99 Aligned_cols=120 Identities=10% Similarity=0.046 Sum_probs=70.6
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEeccCCCHH----HH-HHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHH-
Q 021144 161 VSLETLKEFHRRRVLILANSGADLIAFETIPNKL----EA-KAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECA- 234 (317)
Q Consensus 161 ~s~~el~~~h~~qi~~l~~~gvD~l~~ET~p~~~----Ea-~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~- 234 (317)
++.+++.+.|++ + ..+.|++++|+...+. +- ....++++..+ .||++-..... | ++.+++
T Consensus 111 ~~~~~i~~~~~~----l-~~~~D~vlIEGagGl~~pl~~~~~~~adla~~l~--~pVILV~~~~~------g-~i~~~~l 176 (251)
T 3fgn_A 111 PARDQIVRLIAD----L-DRPGRLTLVEGAGGLLVELAEPGVTLRDVAVDVA--AAALVVVTADL------G-TLNHTKL 176 (251)
T ss_dssp CCHHHHHHHHHT----T-CCTTCEEEEECSSSTTCEEETTTEEHHHHHHHTT--CEEEEEECSST------T-HHHHHHH
T ss_pred CCHHHHHHHHHH----H-HhcCCEEEEECCCCCcCCcCcccchHHHHHHHcC--CCEEEEEcCCC------c-cHHHHHH
Confidence 466666665543 2 3578999999976542 21 23445666654 89986554321 2 233333
Q ss_pred --HHhh-cCCCceEEEEcCCC--hhh-hHHHHHHHHhhCCCc-EEEEeCCCCccccccccccccCCCChhhHHHHHHHHH
Q 021144 235 --SIAD-SCEQVVAVGINCTS--PRF-IHGLILSVRKVTSKP-VIIYPNSGETYNAELKKWVVSFSLHFFPLELILNPFA 307 (317)
Q Consensus 235 --~~~~-~~~~~~aiGvNC~~--p~~-~~~~l~~l~~~~~~p-l~vyPNaG~~~d~~~~~w~~~~~~~~~~~~~~~~~w~ 307 (317)
+.+. ....+.++=+|... |.. ....++.+.+. .| |++-|... ...++++|.+.+..|.
T Consensus 177 t~~~l~~~g~~i~GvIlN~v~~~~~~~~~~~~~~le~~--vpvLG~iP~~~-------------~~l~~~~~~~~~~~~~ 241 (251)
T 3fgn_A 177 TLEALAAQQVSCAGLVIGSWPDPPGLVAASNRSALARI--AMVRAALPAGA-------------ASLDAGDFAAMSAAAF 241 (251)
T ss_dssp HHHHHHHTTCCEEEEEEEEECSSCCHHHHHHHHHHHHH--SCEEEEEETTG-------------GGCCHHHHHHHHHHHS
T ss_pred HHHHHHhCCCCEEEEEEECCCCchhhhhhhHHHHHHHh--CCEEEEeeCCC-------------CcCCHHHHHHHHhccc
Confidence 2222 23457788899963 322 23345556655 77 55667442 1257888999999997
Q ss_pred Hc
Q 021144 308 SC 309 (317)
Q Consensus 308 ~~ 309 (317)
.-
T Consensus 242 ~~ 243 (251)
T 3fgn_A 242 DR 243 (251)
T ss_dssp CH
T ss_pred ch
Confidence 64
No 133
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=74.64 E-value=2.7 Score=38.16 Aligned_cols=45 Identities=24% Similarity=0.308 Sum_probs=33.0
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEE
Q 021144 162 SLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAW 213 (317)
Q Consensus 162 s~~el~~~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~ 213 (317)
+.+++ +.-.++++++.++|+|.|++|-+|+. +++.+.+.+ ++|++
T Consensus 168 t~~~a-~~~i~rA~a~~eAGA~~ivlE~vp~~-~a~~It~~l-----~iP~i 212 (275)
T 3vav_A 168 TEAGA-AQLLRDARAVEEAGAQLIVLEAVPTL-VAAEVTREL-----SIPTI 212 (275)
T ss_dssp SHHHH-HHHHHHHHHHHHHTCSEEEEESCCHH-HHHHHHHHC-----SSCEE
T ss_pred CHHHH-HHHHHHHHHHHHcCCCEEEecCCCHH-HHHHHHHhC-----CCCEE
Confidence 44444 44556899999999999999999985 666665432 38876
No 134
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=74.63 E-value=35 Score=34.16 Aligned_cols=130 Identities=18% Similarity=0.150 Sum_probs=76.8
Q ss_pred HHHHHHHHHHHHHHHHhCCCCEEEeccCC-C-----------------HHHHHHHHHHHHHhCCCccEEEEEEEcCCCcc
Q 021144 163 LETLKEFHRRRVLILANSGADLIAFETIP-N-----------------KLEAKAYAELLEEEGITIPAWFSFNSKDGINV 224 (317)
Q Consensus 163 ~~el~~~h~~qi~~l~~~gvD~l~~ET~p-~-----------------~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l 224 (317)
.+.+.++|++++ +.|+.+++.|.+. + +...+.+.+++.+.+ .|+++++.= .|+.
T Consensus 36 ~~~~~~~y~~ra----~gg~gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vh~~g--~~i~~Ql~h--~Gr~ 107 (671)
T 1ps9_A 36 AERLAAFYAERA----RHGVALIVSGGIAPDLTGVGMEGGAMLNDASQIPHHRTITEAVHQEG--GKIALQILH--TGRY 107 (671)
T ss_dssp HHHHHHHHHHHH----HTTCSEEEEEEEBSSSTTCSBTTCCBCCSGGGHHHHHHHHHHHHHTT--CCEEEEECC--CGGG
T ss_pred cHHHHHHHHHHh----cCCCCEEEecccccCccccCCCCCCccCCHHHHHHHHHHHHHHHhcC--CEEEEEecc--CCcc
Confidence 477888888876 4889999988542 1 234556667777765 688888732 1111
Q ss_pred c-----------------------CC-------CcHHHHHHHhhcCCCceEEEEcCCC---------h------------
Q 021144 225 V-----------------------SG-------DSILECASIADSCEQVVAVGINCTS---------P------------ 253 (317)
Q Consensus 225 ~-----------------------~G-------~~l~~a~~~~~~~~~~~aiGvNC~~---------p------------ 253 (317)
. +- +.+.++++.+.+ .+.++|=|||.+ |
T Consensus 108 ~~~~~~~~ps~~~~~~~~~~p~~~t~~ei~~~i~~~~~aA~~a~~-aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs 186 (671)
T 1ps9_A 108 SYQPHLVAPSALQAPINRFVPHELSHEEILQLIDNFARCAQLARE-AGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGD 186 (671)
T ss_dssp SBSTTCEESSSCCCTTCSSCCEECCHHHHHHHHHHHHHHHHHHHH-TTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSS
T ss_pred cCCCCCcCCCCcccccCCCCCccCCHHHHHHHHHHHHHHHHHHHH-cCCCEEEEccccchHHHHhCCCccCCCcCcCCCc
Confidence 0 00 123344544444 589999999864 2
Q ss_pred -----hhhHHHHHHHHhhC--CCcEEEEeCCCCccccccccccccCCCChhhHHHHHHHHHHcc
Q 021144 254 -----RFIHGLILSVRKVT--SKPVIIYPNSGETYNAELKKWVVSFSLHFFPLELILNPFASCR 310 (317)
Q Consensus 254 -----~~~~~~l~~l~~~~--~~pl~vyPNaG~~~d~~~~~w~~~~~~~~~~~~~~~~~w~~~~ 310 (317)
..+..+++.+++.. ++|+++.=+..+..+ .+.+.+++.++++...+.|
T Consensus 187 ~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~~---------~g~~~~~~~~~a~~l~~~g 241 (671)
T 1ps9_A 187 YRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVE---------DGGTFAETVELAQAIEAAG 241 (671)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCST---------TCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHcCCCceEEEEECccccCC---------CCCCHHHHHHHHHHHHhcC
Confidence 23456666777765 678877655422110 1134555666666666655
No 135
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=74.57 E-value=54 Score=30.29 Aligned_cols=154 Identities=16% Similarity=0.121 Sum_probs=85.7
Q ss_pred ChHHHHHHHHHHHHhhcccccc-ccccccHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCC
Q 021144 53 SPHLVRKVHLDYLDAGANIIIT-ASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (317)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~T-nTy~as~~~l~~~g~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (317)
+.+.+++.-+.++++|.+-|.. -|-+=. .-++.+|-.++++.+++.+. +
T Consensus 50 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~------~~Ls~eEr~~vi~~~ve~~~------------------------g 99 (343)
T 2v9d_A 50 DKPGTAALIDDLIKAGVDGLFFLGSGGEF------SQLGAEERKAIARFAIDHVD------------------------R 99 (343)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEESSTTTTG------GGSCHHHHHHHHHHHHHHHT------------------------T
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccCh------hhCCHHHHHHHHHHHHHHhC------------------------C
Confidence 4567888888889999995543 332211 12455666777777665442 2
Q ss_pred CCeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEecc----CCCHHHHHHHHHHHHHhC
Q 021144 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFET----IPNKLEAKAYAELLEEEG 207 (317)
Q Consensus 132 ~~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~ET----~p~~~Ea~a~~~~~~~~~ 207 (317)
+-+.|+| +|. .+.++..+ +++...+.|+|.+++=+ -|+-+++..-.+.+.+..
T Consensus 100 rvpViaG-vg~------------------~st~eai~----la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~ 156 (343)
T 2v9d_A 100 RVPVLIG-TGG------------------TNARETIE----LSQHAQQAGADGIVVINPYYWKVSEANLIRYFEQVADSV 156 (343)
T ss_dssp SSCEEEE-CCS------------------SCHHHHHH----HHHHHHHHTCSEEEEECCSSSCCCHHHHHHHHHHHHHTC
T ss_pred CCcEEEe-cCC------------------CCHHHHHH----HHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc
Confidence 2346676 332 14444443 45566678999997754 246777776666665543
Q ss_pred CCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCCChhhhHHHHHHH
Q 021144 208 ITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPRFIHGLILSV 263 (317)
Q Consensus 208 ~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~~p~~~~~~l~~l 263 (317)
++|+++== + .+++--.-+++...+.+++.+++.+|=--|.....+..+++..
T Consensus 157 -~lPiilYn-~--P~~tg~~l~~e~~~~La~~~pnIvgiKdssgd~~~~~~l~~~~ 208 (343)
T 2v9d_A 157 -TLPVMLYN-F--PALTGQDLTPALVKTLADSRSNIIGIKDTIDSVAHLRSMIHTV 208 (343)
T ss_dssp -SSCEEEEE-C--HHHHSSCCCHHHHHHHHHHCTTEEEEEECCSCHHHHHHHHHHH
T ss_pred -CCCEEEEe-C--chhcCcCCCHHHHHHHHHhCCCEEEEEeCCCCHHHHHHHHHhc
Confidence 69988421 1 1222122345545555423445444433334455566665543
No 136
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=74.36 E-value=5.4 Score=36.34 Aligned_cols=64 Identities=14% Similarity=0.123 Sum_probs=42.9
Q ss_pred HHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcC
Q 021144 174 VLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINC 250 (317)
Q Consensus 174 i~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC 250 (317)
++..+++|+|+|.+-+| +.++++.+++.++...++.|+.+|--+ +++.+.+.. + .++++|.+-.
T Consensus 206 a~eA~~aGaD~I~LDn~-~~e~l~~av~~l~~~~~~v~ieASGGI----------t~eni~~~a-~-tGVD~IsvGs 269 (285)
T 1o4u_A 206 ALRAVEAGADIVMLDNL-SPEEVKDISRRIKDINPNVIVEVSGGI----------TEENVSLYD-F-ETVDVISSSR 269 (285)
T ss_dssp HHHHHHTTCSEEEEESC-CHHHHHHHHHHHHHHCTTSEEEEEECC----------CTTTGGGGC-C-TTCCEEEEGG
T ss_pred HHHHHHcCCCEEEECCC-CHHHHHHHHHHhhccCCCceEEEECCC----------CHHHHHHHH-H-cCCCEEEEeH
Confidence 33345589999999997 478888888888764445777777633 333333333 2 5788888765
No 137
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=73.36 E-value=2.5 Score=37.95 Aligned_cols=38 Identities=11% Similarity=0.257 Sum_probs=31.0
Q ss_pred HHHHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEE
Q 021144 171 RRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAW 213 (317)
Q Consensus 171 ~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~ 213 (317)
.+|++.+.++|+|.|++|.+|+.++++.+.+.+ +.|+-
T Consensus 171 i~ra~a~~eAGAd~i~~e~~~~~~~~~~i~~~~-----~~P~n 208 (255)
T 2qiw_A 171 IKRIKLMEQAGARSVYPVGLSTAEQVERLVDAV-----SVPVN 208 (255)
T ss_dssp HHHHHHHHHHTCSEEEECCCCSHHHHHHHHTTC-----SSCBE
T ss_pred HHHHHHHHHcCCcEEEEcCCCCHHHHHHHHHhC-----CCCEE
Confidence 348899999999999999999999988776543 36764
No 138
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=73.29 E-value=49 Score=31.31 Aligned_cols=73 Identities=11% Similarity=-0.005 Sum_probs=45.8
Q ss_pred HHHHHHhhcCCCceEEEEcCCC---------h-----------------hhhHHHHHHHHhhCC-CcEEEEeCCCCcccc
Q 021144 231 LECASIADSCEQVVAVGINCTS---------P-----------------RFIHGLILSVRKVTS-KPVIIYPNSGETYNA 283 (317)
Q Consensus 231 ~~a~~~~~~~~~~~aiGvNC~~---------p-----------------~~~~~~l~~l~~~~~-~pl~vyPNaG~~~d~ 283 (317)
.++++.+.+ .+.++|=|||++ | ..+..+++.+++... .||++.-+.++.+++
T Consensus 174 ~~AA~~a~~-AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V~vRls~~~~~~g 252 (402)
T 2hsa_B 174 RRSALNAIE-AGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVSPAIDHLD 252 (402)
T ss_dssp HHHHHHHHH-TTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECSSCCSTT
T ss_pred HHHHHHHHH-cCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhCCCcEEEEeccccccCC
Confidence 445555544 589999999964 2 235566677776653 489998887643322
Q ss_pred ccccccccCCCChhhHHHHHHHHHHcc
Q 021144 284 ELKKWVVSFSLHFFPLELILNPFASCR 310 (317)
Q Consensus 284 ~~~~w~~~~~~~~~~~~~~~~~w~~~~ 310 (317)
.. ...+.+++.++++...+.|
T Consensus 253 ~~------~~~~~~~~~~la~~le~~G 273 (402)
T 2hsa_B 253 AM------DSNPLSLGLAVVERLNKIQ 273 (402)
T ss_dssp CC------CSCHHHHHHHHHHHHHHHH
T ss_pred CC------CCCCHHHHHHHHHHHHhcC
Confidence 11 1123566777777777777
No 139
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=73.16 E-value=20 Score=30.12 Aligned_cols=86 Identities=17% Similarity=0.140 Sum_probs=51.4
Q ss_pred HHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCCC
Q 021144 173 RVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTS 252 (317)
Q Consensus 173 qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~~ 252 (317)
+++.+.+.|+|.+.+.... ..+++..++.+ .++++. + .++.++..... .+++.|+++-+.
T Consensus 72 ~i~~a~~~Gad~V~~~~~~-----~~~~~~~~~~g--~~~~~g--~---------~t~~e~~~a~~--~G~d~v~v~~t~ 131 (212)
T 2v82_A 72 QVDALARMGCQLIVTPNIH-----SEVIRRAVGYG--MTVCPG--C---------ATATEAFTALE--AGAQALKIFPSS 131 (212)
T ss_dssp HHHHHHHTTCCEEECSSCC-----HHHHHHHHHTT--CEEECE--E---------CSHHHHHHHHH--TTCSEEEETTHH
T ss_pred HHHHHHHcCCCEEEeCCCC-----HHHHHHHHHcC--CCEEee--c---------CCHHHHHHHHH--CCCCEEEEecCC
Confidence 5777888999999866532 22345566655 666655 2 24566655544 478999986543
Q ss_pred hhhhHHHHHHHHhhCCCcEEEEeCCCC
Q 021144 253 PRFIHGLILSVRKVTSKPVIIYPNSGE 279 (317)
Q Consensus 253 p~~~~~~l~~l~~~~~~pl~vyPNaG~ 279 (317)
+. -...++++++..+..+-+++-+|-
T Consensus 132 ~~-g~~~~~~l~~~~~~~ipvia~GGI 157 (212)
T 2v82_A 132 AF-GPQYIKALKAVLPSDIAVFAVGGV 157 (212)
T ss_dssp HH-CHHHHHHHHTTSCTTCEEEEESSC
T ss_pred CC-CHHHHHHHHHhccCCCeEEEeCCC
Confidence 22 235666666654311335566664
No 140
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=72.91 E-value=56 Score=29.74 Aligned_cols=150 Identities=14% Similarity=0.095 Sum_probs=84.3
Q ss_pred ChHHHHHHHHHHHHhhccccc-cccccccHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCC
Q 021144 53 SPHLVRKVHLDYLDAGANIII-TASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (317)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~-TnTy~as~~~l~~~g~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (317)
+.+.+++.-+.++++|++-|. .-|-+=. .-++.+|-.++++.+++.+. +
T Consensus 43 D~~~l~~lv~~li~~Gv~Gi~v~GtTGE~------~~Ls~~Er~~v~~~~v~~~~------------------------g 92 (315)
T 3na8_A 43 DLPALGRSIERLIDGGVHAIAPLGSTGEG------AYLSDPEWDEVVDFTLKTVA------------------------H 92 (315)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECSSGGGTG------GGSCHHHHHHHHHHHHHHHT------------------------T
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCh------hhCCHHHHHHHHHHHHHHhC------------------------C
Confidence 457788888888999999544 3333311 12455666777777665542 2
Q ss_pred CCeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEeccC----CCHHHHHHHHHHHHHhC
Q 021144 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI----PNKLEAKAYAELLEEEG 207 (317)
Q Consensus 132 ~~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~ET~----p~~~Ea~a~~~~~~~~~ 207 (317)
+-+.|+| +|. .+.++..+ +++...+.|+|.+++=+= |+.+++..-.+.+.+..
T Consensus 93 rvpViaG-vg~------------------~~t~~ai~----la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~ 149 (315)
T 3na8_A 93 RVPTIVS-VSD------------------LTTAKTVR----RAQFAESLGAEAVMVLPISYWKLNEAEVFQHYRAVGEAI 149 (315)
T ss_dssp SSCBEEE-CCC------------------SSHHHHHH----HHHHHHHTTCSEEEECCCCSSCCCHHHHHHHHHHHHHHC
T ss_pred CCcEEEe-cCC------------------CCHHHHHH----HHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhC
Confidence 2345666 332 13444433 566677799999987542 46677776666665543
Q ss_pred CCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCCC--hhhhHHHHH
Q 021144 208 ITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTS--PRFIHGLIL 261 (317)
Q Consensus 208 ~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~~--p~~~~~~l~ 261 (317)
++|+++== + .+++--.-+++...+.+.+.++ .+||--++ ...+..+++
T Consensus 150 -~lPiilYn-~--P~~tg~~l~~~~~~~L~a~~pn--IvgiKdssgd~~~~~~~~~ 199 (315)
T 3na8_A 150 -GVPVMLYN-N--PGTSGIDMSVELILRIVREVDN--VTMVKESTGDIQRMHKLRL 199 (315)
T ss_dssp -SSCEEEEE-C--HHHHSCCCCHHHHHHHHHHSTT--EEEEEECSSCHHHHHHHHH
T ss_pred -CCcEEEEe-C--cchhCcCCCHHHHHHHHhcCCC--EEEEECCCCCHHHHHHHHH
Confidence 59988432 1 1222222344434444244445 56666653 344444443
No 141
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=72.82 E-value=46 Score=29.48 Aligned_cols=96 Identities=17% Similarity=0.072 Sum_probs=55.4
Q ss_pred HHHHHHhCCCCEEEeccCC--------CHHHHHHHHHHHHHh----CCCccEEEEEEEcCC--CcccCCCcHHHHHHHhh
Q 021144 173 RVLILANSGADLIAFETIP--------NKLEAKAYAELLEEE----GITIPAWFSFNSKDG--INVVSGDSILECASIAD 238 (317)
Q Consensus 173 qi~~l~~~gvD~l~~ET~p--------~~~Ea~a~~~~~~~~----~~~~pv~iSf~~~~~--~~l~~G~~l~~a~~~~~ 238 (317)
-++.|.++|++.+-+|--. +.+|+..-++++.+. + .|+.|--..+.- ++-.....++++++.+.
T Consensus 98 ~~~~l~~aGa~gv~iEd~~~~~~k~l~~~~e~~~~I~a~~~a~~~~g--~~~~v~aRtd~~~~g~~~~~~~~~~ai~ra~ 175 (255)
T 2qiw_A 98 LIAQILEAGAVGINVEDVVHSEGKRVREAQEHADYIAAARQAADVAG--VDVVINGRTDAVKLGADVFEDPMVEAIKRIK 175 (255)
T ss_dssp HHHHHHHTTCCEEEECSEEGGGTTEECCHHHHHHHHHHHHHHHHHHT--CCCEEEEEECHHHHCTTTSSSHHHHHHHHHH
T ss_pred HHHHHHHcCCcEEEECCCCCCCCCcccCHHHHHHHHHHHHHHHHhcC--CCeEEEEEechhhccCCcchHHHHHHHHHHH
Confidence 4666778999999999653 345655555555443 5 676665544320 11000123666665443
Q ss_pred c--CCCceEEEEcCCC-hhhhHHHHHHHHhhCCCcEEEE
Q 021144 239 S--CEQVVAVGINCTS-PRFIHGLILSVRKVTSKPVIIY 274 (317)
Q Consensus 239 ~--~~~~~aiGvNC~~-p~~~~~~l~~l~~~~~~pl~vy 274 (317)
. ..|+++|=+-|.. ++. ++.+.+..+.|+.+.
T Consensus 176 a~~eAGAd~i~~e~~~~~~~----~~~i~~~~~~P~n~~ 210 (255)
T 2qiw_A 176 LMEQAGARSVYPVGLSTAEQ----VERLVDAVSVPVNIT 210 (255)
T ss_dssp HHHHHTCSEEEECCCCSHHH----HHHHHTTCSSCBEEE
T ss_pred HHHHcCCcEEEEcCCCCHHH----HHHHHHhCCCCEEEE
Confidence 1 2478999999974 343 455555566786443
No 142
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=72.76 E-value=54 Score=29.52 Aligned_cols=149 Identities=14% Similarity=0.090 Sum_probs=79.1
Q ss_pred CeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEecc---CCC------HHHHHHHHHHH
Q 021144 133 PVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFET---IPN------KLEAKAYAELL 203 (317)
Q Consensus 133 ~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~ET---~p~------~~Ea~a~~~~~ 203 (317)
++.|-|-|=++++...||..| .+.+++.+ +++.+++.|+|+|=+-. =|. .+|.+.++.++
T Consensus 14 ~~~imGilN~TpdSFsdgg~~-------~~~~~a~~----~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi 82 (282)
T 1aj0_A 14 HPHVMGILNVTPDSFSDGGTH-------NSLIDAVK----HANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVV 82 (282)
T ss_dssp SCEEEEEEECCTTTSCCCCCC-------THHHHHHH----HHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCCCcccccccc-------CCHHHHHH----HHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHH
Confidence 568999999998877766433 24444444 56777889999995543 244 77877666555
Q ss_pred HHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCCC---hhhhHHHHHHHHhhCCCcEEEEeCCCCc
Q 021144 204 EEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTS---PRFIHGLILSVRKVTSKPVIIYPNSGET 280 (317)
Q Consensus 204 ~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~~---p~~~~~~l~~l~~~~~~pl~vyPNaG~~ 280 (317)
+.......+.+|+- -... ++++...+. +++. ||=.+ .+.|.+++. + .+.|+++.++.|.+
T Consensus 83 ~~l~~~~~~piSID---------T~~~-~va~aAl~a-Ga~i--INdvsg~~d~~~~~~~a---~-~~~~vVlmh~~G~p 145 (282)
T 1aj0_A 83 EAIAQRFEVWISVD---------TSKP-EVIRESAKV-GAHI--INDIRSLSEPGALEAAA---E-TGLPVCLMHMQGNP 145 (282)
T ss_dssp HHHHHHCCCEEEEE---------CCCH-HHHHHHHHT-TCCE--EEETTTTCSTTHHHHHH---H-HTCCEEEECCSSCT
T ss_pred HHHHhhcCCeEEEe---------CCCH-HHHHHHHHc-CCCE--EEECCCCCCHHHHHHHH---H-hCCeEEEEccCCCC
Confidence 43210113445552 2222 233333222 3332 44432 234444433 3 37899999998864
Q ss_pred cccccccccccCCCC----hhhHHHHHHHHHHcccc
Q 021144 281 YNAELKKWVVSFSLH----FFPLELILNPFASCRLI 312 (317)
Q Consensus 281 ~d~~~~~w~~~~~~~----~~~~~~~~~~w~~~~~~ 312 (317)
-+-.. .+.|..- -+.+.+.+....+.|+=
T Consensus 146 ~tm~~---~~~y~d~~~ev~~~l~~~i~~a~~~Gi~ 178 (282)
T 1aj0_A 146 KTMQE---APKYDDVFAEVNRYFIEQIARCEQAGIA 178 (282)
T ss_dssp TCCSC---CCCCSCHHHHHHHHHHHHHHHHHHTTCC
T ss_pred ccccc---cCccchHHHHHHHHHHHHHHHHHHcCCC
Confidence 22111 1112100 23455566666677753
No 143
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=72.59 E-value=30 Score=30.21 Aligned_cols=101 Identities=12% Similarity=0.101 Sum_probs=61.8
Q ss_pred HHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEc--CC-------CcccCCCcHHHHHHHhhcCCCc
Q 021144 173 RVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSK--DG-------INVVSGDSILECASIADSCEQV 243 (317)
Q Consensus 173 qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~--~~-------~~l~~G~~l~~a~~~~~~~~~~ 243 (317)
+++.+++.|+|-+.+-|..- ..-.-+.+++++.+ +..+++++.+. .+ .+-.++.++.+.+..+.. .++
T Consensus 89 ~~~~~l~~GadkVii~t~a~-~~p~li~e~~~~~g-~q~iv~~iD~~~~~~~~v~~~gw~~~~~~~~~~~~~~~~~-~g~ 165 (243)
T 4gj1_A 89 EVKALLDCGVKRVVIGSMAI-KDATLCLEILKEFG-SEAIVLALDTILKEDYVVAVNAWQEASDKKLMEVLDFYSN-KGL 165 (243)
T ss_dssp HHHHHHHTTCSEEEECTTTT-TCHHHHHHHHHHHC-TTTEEEEEEEEESSSEEEC--------CCBHHHHHHHHHT-TTC
T ss_pred HHHHHHHcCCCEEEEccccc-cCCchHHHHHhccc-CceEEEEEEEEeCCCCEEEecCceecccchHHHHHHHHhh-cCC
Confidence 46667779999999987652 22233445666666 46678788763 22 233456778888888765 577
Q ss_pred eEEEEcCCChhh-----hHHHHHHHHhhC-CCcEEEEeC
Q 021144 244 VAVGINCTSPRF-----IHGLILSVRKVT-SKPVIIYPN 276 (317)
Q Consensus 244 ~aiGvNC~~p~~-----~~~~l~~l~~~~-~~pl~vyPN 276 (317)
.-|-+|+..-+. =..+++.+.+.. +.|+++---
T Consensus 166 ~eil~t~Id~DGt~~G~d~~l~~~l~~~~~~ipviasGG 204 (243)
T 4gj1_A 166 KHILCTDISKDGTMQGVNVRLYKLIHEIFPNICIQASGG 204 (243)
T ss_dssp CEEEEEETTC-----CCCHHHHHHHHHHCTTSEEEEESC
T ss_pred cEEEeeeecccccccCCCHHHHHHHHHhcCCCCEEEEcC
Confidence 778888753211 135777777754 678765433
No 144
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=72.42 E-value=35 Score=32.01 Aligned_cols=67 Identities=10% Similarity=-0.034 Sum_probs=42.7
Q ss_pred HHHHHHHHHhCCCCEEEecc-CCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEE
Q 021144 170 HRRRVLILANSGADLIAFET-IPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGI 248 (317)
Q Consensus 170 h~~qi~~l~~~gvD~l~~ET-~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGv 248 (317)
..++++.+.++|+|+|.+-| ..+...+...++.+++..+++|+++-- -.+++++....+ .++++|-+
T Consensus 101 ~~e~~~~a~~aGvdvI~id~a~G~~~~~~e~I~~ir~~~~~~~Vi~G~----------V~T~e~A~~a~~--aGaD~I~V 168 (361)
T 3r2g_A 101 ELQRAEALRDAGADFFCVDVAHAHAKYVGKTLKSLRQLLGSRCIMAGN----------VATYAGADYLAS--CGADIIKA 168 (361)
T ss_dssp HHHHHHHHHHTTCCEEEEECSCCSSHHHHHHHHHHHHHHTTCEEEEEE----------ECSHHHHHHHHH--TTCSEEEE
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCCcHhHHHHHHHHHHhcCCCeEEEcC----------cCCHHHHHHHHH--cCCCEEEE
Confidence 44578889999999998754 233334445566677653358998721 125666665554 37777766
No 145
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=72.16 E-value=56 Score=29.45 Aligned_cols=148 Identities=17% Similarity=0.176 Sum_probs=82.8
Q ss_pred ChHHHHHHHHHHHHhhccccc-cccccccHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCC
Q 021144 53 SPHLVRKVHLDYLDAGANIII-TASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (317)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~-TnTy~as~~~l~~~g~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (317)
+.+.+++.-+.++++|.+-|. .-|-+=. .-++.+|-.++++.+++.+. +
T Consensus 31 D~~~l~~lv~~li~~Gv~gl~v~GtTGE~------~~Ls~eEr~~v~~~~~~~~~------------------------g 80 (301)
T 1xky_A 31 DFAKTTKLVNYLIDNGTTAIVVGGTTGES------PTLTSEEKVALYRHVVSVVD------------------------K 80 (301)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSTTTTG------GGSCHHHHHHHHHHHHHHHT------------------------T
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCh------hhCCHHHHHHHHHHHHHHhC------------------------C
Confidence 456788888888999999554 3332211 12455667777777765542 2
Q ss_pred CCeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEecc----CCCHHHHHHHHHHHHHhC
Q 021144 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFET----IPNKLEAKAYAELLEEEG 207 (317)
Q Consensus 132 ~~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~ET----~p~~~Ea~a~~~~~~~~~ 207 (317)
+-+.|+| +|. .+.++..+ +++...+.|+|.+++=+ -|+-+++..-.+.+.+..
T Consensus 81 rvpViaG-vg~------------------~~t~~ai~----la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~ 137 (301)
T 1xky_A 81 RVPVIAG-TGS------------------NNTHASID----LTKKATEVGVDAVMLVAPYYNKPSQEGMYQHFKAIAEST 137 (301)
T ss_dssp SSCEEEE-CCC------------------SCHHHHHH----HHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHTC
T ss_pred CceEEeC-CCC------------------CCHHHHHH----HHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhc
Confidence 2346676 332 14444433 56667779999997754 246677776666665543
Q ss_pred CCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCC--ChhhhHHHH
Q 021144 208 ITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCT--SPRFIHGLI 260 (317)
Q Consensus 208 ~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~--~p~~~~~~l 260 (317)
++|+++= .+. +++--.-+.+...+.+ +.++ .+||--+ ....+..++
T Consensus 138 -~lPiilY-n~P--~~tg~~l~~~~~~~La-~~pn--IvgiKdssgd~~~~~~~~ 185 (301)
T 1xky_A 138 -PLPVMLY-NVP--GRSIVQISVDTVVRLS-EIEN--IVAIKDAGGDVLTMTEII 185 (301)
T ss_dssp -SSCEEEE-ECH--HHHSSCCCHHHHHHHH-TSTT--EEEEEECSSCHHHHHHHH
T ss_pred -CCCEEEE-eCc--cccCCCCCHHHHHHHH-cCCC--EEEEEcCCCCHHHHHHHH
Confidence 6998852 121 2221223445444444 3344 5555444 344444443
No 146
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=72.04 E-value=7.9 Score=35.21 Aligned_cols=66 Identities=14% Similarity=0.116 Sum_probs=44.9
Q ss_pred HHHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcC
Q 021144 172 RRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINC 250 (317)
Q Consensus 172 ~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC 250 (317)
++++..+++|+|.|.+.+|+ ..+++.+++.++...++.++.+|- |-+++.+.+... .+++.|++-.
T Consensus 205 eea~eal~aGaD~I~LDn~~-~~~~~~~v~~l~~~~~~v~ieaSG----------GIt~~~i~~~a~--tGVD~isvG~ 270 (284)
T 1qpo_A 205 EQLDAVLPEKPELILLDNFA-VWQTQTAVQRRDSRAPTVMLESSG----------GLSLQTAATYAE--TGVDYLAVGA 270 (284)
T ss_dssp HHHHHHGGGCCSEEEEETCC-HHHHHHHHHHHHHHCTTCEEEEES----------SCCTTTHHHHHH--TTCSEEECGG
T ss_pred HHHHHHHHcCCCEEEECCCC-HHHHHHHHHHhhccCCCeEEEEEC----------CCCHHHHHHHHh--cCCCEEEECH
Confidence 35555666899999999974 688888888888644345555443 445555555544 4788888665
No 147
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=72.04 E-value=15 Score=31.66 Aligned_cols=99 Identities=10% Similarity=-0.018 Sum_probs=55.9
Q ss_pred HHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCC-----C-cccCCCcHHHHHHHhhcCCCceEE
Q 021144 173 RVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDG-----I-NVVSGDSILECASIADSCEQVVAV 246 (317)
Q Consensus 173 qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~-----~-~l~~G~~l~~a~~~~~~~~~~~ai 246 (317)
+++.+.+.|+|.+.+-+.. +.+-..+.++ ++.+ ..+.+++.++.+ + .-.++.+..+.++.+.+ .++..|
T Consensus 87 ~~~~~~~~Gad~V~lg~~~-l~~p~~~~~~-~~~g--~~i~~~~d~~~~~v~~~g~~~~~~~~~~e~~~~~~~-~G~~~i 161 (241)
T 1qo2_A 87 YAEKLRKLGYRRQIVSSKV-LEDPSFLKSL-REID--VEPVFSLDTRGGRVAFKGWLAEEEIDPVSLLKRLKE-YGLEEI 161 (241)
T ss_dssp HHHHHHHTTCCEEEECHHH-HHCTTHHHHH-HTTT--CEEEEEEEEETTEECCTTCSSCSCCCHHHHHHHHHT-TTCCEE
T ss_pred HHHHHHHCCCCEEEECchH-hhChHHHHHH-HHcC--CcEEEEEEecCCEEEECCceecCCCCHHHHHHHHHh-CCCCEE
Confidence 3444555899999876532 1111223333 4443 346666666431 1 11133467777766654 577888
Q ss_pred EEcCCChhhh-----HHHHHHHHhhCCCcEEEEeCCC
Q 021144 247 GINCTSPRFI-----HGLILSVRKVTSKPVIIYPNSG 278 (317)
Q Consensus 247 GvNC~~p~~~-----~~~l~~l~~~~~~pl~vyPNaG 278 (317)
.++....+.. ..+++++++..+.|+++ ++|
T Consensus 162 ~~t~~~~~g~~~g~~~~~i~~l~~~~~iPvia--~GG 196 (241)
T 1qo2_A 162 VHTEIEKDGTLQEHDFSLTKKIAIEAEVKVLA--AGG 196 (241)
T ss_dssp EEEETTHHHHTCCCCHHHHHHHHHHHTCEEEE--ESS
T ss_pred EEEeecccccCCcCCHHHHHHHHHhcCCcEEE--ECC
Confidence 8877542221 46777888777888654 555
No 148
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=72.04 E-value=29 Score=31.13 Aligned_cols=73 Identities=8% Similarity=-0.126 Sum_probs=45.1
Q ss_pred HHHHHHHHHHhCCCC-EEEecc-----------CCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHH
Q 021144 169 FHRRRVLILANSGAD-LIAFET-----------IPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASI 236 (317)
Q Consensus 169 ~h~~qi~~l~~~gvD-~l~~ET-----------~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~ 236 (317)
.|.+.++.+.++|+| .|-+-- ..+.+.+..+++.+++.. ++|+++-++.. + +-+.+.+.++.
T Consensus 107 ~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~-~~Pv~vKi~~~----~-~~~~~~~~a~~ 180 (311)
T 1jub_A 107 ENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFF-TKPLGVKLPPY----F-DLVHFDIMAEI 180 (311)
T ss_dssp HHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTC-CSCEEEEECCC----C-SHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhc-CCCEEEEECCC----C-CHHHHHHHHHH
Confidence 356677788889999 886631 126666777888887753 68999876432 1 11223444556
Q ss_pred hhcCCCceEEEE
Q 021144 237 ADSCEQVVAVGI 248 (317)
Q Consensus 237 ~~~~~~~~aiGv 248 (317)
+.+ .++++|-+
T Consensus 181 ~~~-~G~d~i~v 191 (311)
T 1jub_A 181 LNQ-FPLTYVNS 191 (311)
T ss_dssp HTT-SCCCEEEE
T ss_pred HHH-cCCcEEEe
Confidence 554 47776544
No 149
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=71.92 E-value=43 Score=32.50 Aligned_cols=91 Identities=14% Similarity=0.211 Sum_probs=52.7
Q ss_pred HHHHHHHHhCCCCEEEeccCC-CHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEc
Q 021144 171 RRRVLILANSGADLIAFETIP-NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGIN 249 (317)
Q Consensus 171 ~~qi~~l~~~gvD~l~~ET~p-~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvN 249 (317)
.++++.+.++|+|++.+-+-. +......+++.+++..++.|+++- .+ .+.+++....+ .++++|-+.
T Consensus 257 ~~~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~~~~~pvi~~-~v---------~t~~~a~~l~~--aGad~I~vg 324 (514)
T 1jcn_A 257 KYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQKYPHLQVIGG-NV---------VTAAQAKNLID--AGVDGLRVG 324 (514)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHHCTTCEEEEE-EE---------CSHHHHHHHHH--HTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHhCCCCceEec-cc---------chHHHHHHHHH--cCCCEEEEC
Confidence 457788888999999875432 333344556667665335888861 11 34555555444 367777442
Q ss_pred ------CC-------C--hhhhHHHHHHHHhhCCCcEEE
Q 021144 250 ------CT-------S--PRFIHGLILSVRKVTSKPVII 273 (317)
Q Consensus 250 ------C~-------~--p~~~~~~l~~l~~~~~~pl~v 273 (317)
|+ + .......+.++++..+.|+++
T Consensus 325 ~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~~ipVia 363 (514)
T 1jcn_A 325 MGCGSICITQEVMACGRPQGTAVYKVAEYARRFGVPIIA 363 (514)
T ss_dssp SSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGGGTCCEEE
T ss_pred CCCCcccccccccCCCccchhHHHHHHHHHhhCCCCEEE
Confidence 21 1 122345556666666788653
No 150
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=71.81 E-value=9.2 Score=33.17 Aligned_cols=99 Identities=17% Similarity=0.113 Sum_probs=53.6
Q ss_pred HHHHHHhCCCCEEEecc--CCCHHHHHHHHHHHHHhCCCccEEEEEEEcCC-C----cc-----cCCCcHHHHHHHhhcC
Q 021144 173 RVLILANSGADLIAFET--IPNKLEAKAYAELLEEEGITIPAWFSFNSKDG-I----NV-----VSGDSILECASIADSC 240 (317)
Q Consensus 173 qi~~l~~~gvD~l~~ET--~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~-~----~l-----~~G~~l~~a~~~~~~~ 240 (317)
+++.+.+.|+|.+.+-+ +.+...++.++ +..+ ...+.+++++... + .+ .++.+..+.++.+.+
T Consensus 89 ~~~~~~~~Gad~V~lg~~~l~~p~~~~~~~---~~~~-~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~- 163 (252)
T 1ka9_F 89 DARKLLLSGADKVSVNSAAVRRPELIRELA---DHFG-AQAVVLAIDARWRGDFPEVHVAGGRVPTGLHAVEWAVKGVE- 163 (252)
T ss_dssp HHHHHHHHTCSEEEECHHHHHCTHHHHHHH---HHHC-GGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHH-
T ss_pred HHHHHHHcCCCEEEEChHHHhCcHHHHHHH---HHcC-CCcEEEEEEEecCCCCEEEEECCCccccCCcHHHHHHHHHH-
Confidence 45556667999999866 33333333333 3333 1234555555321 1 11 122455555555544
Q ss_pred CCceEEEEcCCChhh-----hHHHHHHHHhhCCCcEEEEeCCC
Q 021144 241 EQVVAVGINCTSPRF-----IHGLILSVRKVTSKPVIIYPNSG 278 (317)
Q Consensus 241 ~~~~aiGvNC~~p~~-----~~~~l~~l~~~~~~pl~vyPNaG 278 (317)
.++..|.++....+. -..+++++++..+.|+++ ++|
T Consensus 164 ~G~~~i~~~~~~~~g~~~g~~~~~i~~l~~~~~ipvia--~GG 204 (252)
T 1ka9_F 164 LGAGEILLTSMDRDGTKEGYDLRLTRMVAEAVGVPVIA--SGG 204 (252)
T ss_dssp HTCCEEEEEETTTTTTCSCCCHHHHHHHHHHCSSCEEE--ESC
T ss_pred cCCCEEEEecccCCCCcCCCCHHHHHHHHHHcCCCEEE--eCC
Confidence 367777776432211 156788888888889765 455
No 151
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=71.75 E-value=60 Score=29.58 Aligned_cols=193 Identities=11% Similarity=0.039 Sum_probs=97.1
Q ss_pred ChHHHHHHHHHHHHhhccccc-cccccccHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCC
Q 021144 53 SPHLVRKVHLDYLDAGANIII-TASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (317)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~-TnTy~as~~~l~~~g~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (317)
+.+.+++.-+.++++|.|-|. .-|-+=. . -++.+|-.++++.+++.+. +
T Consensus 30 D~~~l~~lv~~li~~Gv~gl~v~GtTGE~-~-----~Ls~~Er~~v~~~~~~~~~------------------------g 79 (318)
T 3qfe_A 30 DLASQERYYAYLARSGLTGLVILGTNAEA-F-----LLTREERAQLIATARKAVG------------------------P 79 (318)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEESSGGGTG-G-----GSCHHHHHHHHHHHHHHHC------------------------T
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccCh-h-----hCCHHHHHHHHHHHHHHhC------------------------C
Confidence 346788888888999999544 3333311 1 2455666677766665441 2
Q ss_pred CCeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEeccC------CCHHHHHHHHHHHHH
Q 021144 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI------PNKLEAKAYAELLEE 205 (317)
Q Consensus 132 ~~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~ET~------p~~~Ea~a~~~~~~~ 205 (317)
+-..|+| +|. .+.++..+ +++...+.|+|.+++=+= ++.+++..-.+.+.+
T Consensus 80 rvpviaG-vg~------------------~~t~~ai~----la~~a~~~Gadavlv~~P~y~~kp~~~~~l~~~f~~ia~ 136 (318)
T 3qfe_A 80 DFPIMAG-VGA------------------HSTRQVLE----HINDASVAGANYVLVLPPAYFGKATTPPVIKSFFDDVSC 136 (318)
T ss_dssp TSCEEEE-CCC------------------SSHHHHHH----HHHHHHHHTCSEEEECCCCC---CCCHHHHHHHHHHHHH
T ss_pred CCcEEEe-CCC------------------CCHHHHHH----HHHHHHHcCCCEEEEeCCcccCCCCCHHHHHHHHHHHHh
Confidence 3346676 332 14444444 455566689999988553 234555555555555
Q ss_pred hCCCccEEEEEEEcCCCcc-cCCCcHHHHHHHhhcCCCceEEEEcCC--ChhhhHHHHHHHHhhCCCcEEEEeCCC-Ccc
Q 021144 206 EGITIPAWFSFNSKDGINV-VSGDSILECASIADSCEQVVAVGINCT--SPRFIHGLILSVRKVTSKPVIIYPNSG-ETY 281 (317)
Q Consensus 206 ~~~~~pv~iSf~~~~~~~l-~~G~~l~~a~~~~~~~~~~~aiGvNC~--~p~~~~~~l~~l~~~~~~pl~vyPNaG-~~~ 281 (317)
.. ++|+++== +. +++ .-.-+++...+..++.++ .+||--+ ....+..+++.+. ...+.+|.=.. ...
T Consensus 137 a~-~lPiilYn-~P--~~t~g~~l~~~~~~~La~~~pn--IvgiKdssgd~~~~~~~~~~~~---~~~f~v~~G~d~~~l 207 (318)
T 3qfe_A 137 QS-PLPVVIYN-FP--GVCNGIDLDSDMITTIARKNPN--VVGVKLTCASVGKITRLAATLP---PAAFSVFGGQSDFLI 207 (318)
T ss_dssp HC-SSCEEEEE-CC--C----CCCCHHHHHHHHHHCTT--EEEEEESSCCHHHHHHHHHHSC---GGGCEEEESCGGGHH
T ss_pred hC-CCCEEEEe-CC--cccCCCCCCHHHHHHHHhhCCC--EEEEEeCCCCHHHHHHHHHhcC---CCCEEEEEecHHHHH
Confidence 43 59988532 21 221 122344444444432445 4555544 4444555444321 12244443221 111
Q ss_pred c---cccccccc-cCCCChhhHHHHHHHHH
Q 021144 282 N---AELKKWVV-SFSLHFFPLELILNPFA 307 (317)
Q Consensus 282 d---~~~~~w~~-~~~~~~~~~~~~~~~w~ 307 (317)
+ .....|.. ....-|+.+.+....|.
T Consensus 208 ~~l~~G~~G~is~~an~~P~~~~~l~~a~~ 237 (318)
T 3qfe_A 208 GGLSVGSAGCIAAFANVFPKTVSKIYELYK 237 (318)
T ss_dssp HHHHTTCCEEECGGGGTCHHHHHHHHHHHH
T ss_pred HHHHCCCCEEEecHHHhhHHHHHHHHHHHH
Confidence 1 01123322 12356777777666553
No 152
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=71.66 E-value=25 Score=32.31 Aligned_cols=95 Identities=13% Similarity=0.063 Sum_probs=56.1
Q ss_pred HHHHHHHHHhCCCCEEEeccCCC-HHH--HHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEE
Q 021144 170 HRRRVLILANSGADLIAFETIPN-KLE--AKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAV 246 (317)
Q Consensus 170 h~~qi~~l~~~gvD~l~~ET~p~-~~E--a~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~ai 246 (317)
-...+++..+.|+.+.+ -|+.. +++ ...-.+.+++...+.|+++++.. |.+.....+.+.. .++++|
T Consensus 75 ~~~~a~aa~~~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~pv~~~i~~--------~~~~~~~~~~~~~-~gad~i 144 (349)
T 1p0k_A 75 NKSLARAASQAGIPLAV-GSQMSALKDPSERLSYEIVRKENPNGLIFANLGS--------EATAAQAKEAVEM-IGANAL 144 (349)
T ss_dssp HHHHHHHHHHHTCCEEC-CCCTTTTTCHHHHHHHHHHHHHCSSSCEEEEEET--------TCCHHHHHHHHHH-TTCSEE
T ss_pred HHHHHHHHHHcCCcEEe-ccchhcccCcccccceehhhhhCCCceeEEeecC--------CCCHHHHHHHHHh-cCCCeE
Confidence 33445556667887644 34432 222 22333445554457899988742 4445555555544 367887
Q ss_pred EEcCCCh----------h--hhHHHHHHHHhhCCCcEEEE
Q 021144 247 GINCTSP----------R--FIHGLILSVRKVTSKPVIIY 274 (317)
Q Consensus 247 GvNC~~p----------~--~~~~~l~~l~~~~~~pl~vy 274 (317)
-+|+..| . .+...++.+++.++.|+++.
T Consensus 145 ~i~~~~~~~~~~~~~~~~~~~~~~~i~~vr~~~~~Pv~vK 184 (349)
T 1p0k_A 145 QIHLNVIQEIVMPEGDRSFSGALKRIEQICSRVSVPVIVK 184 (349)
T ss_dssp EEEECTTTTC--------CTTHHHHHHHHHHHCSSCEEEE
T ss_pred EecccchhhhcCCCCCcchHHHHHHHHHHHHHcCCCEEEE
Confidence 7776533 1 14567888888888999887
No 153
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=71.53 E-value=37 Score=31.29 Aligned_cols=110 Identities=13% Similarity=0.123 Sum_probs=68.3
Q ss_pred CCCHHHH---HHHHHHHHHHHHhCCCCEEEeccC----------C-----------CHH-H---HHHHHHHHHHhCCCcc
Q 021144 160 AVSLETL---KEFHRRRVLILANSGADLIAFETI----------P-----------NKL-E---AKAYAELLEEEGITIP 211 (317)
Q Consensus 160 ~~s~~el---~~~h~~qi~~l~~~gvD~l~~ET~----------p-----------~~~-E---a~a~~~~~~~~~~~~p 211 (317)
+++.+|+ .+.|.+-++...++|.|.|=+--- | +++ . +..+++++++.- +.|
T Consensus 133 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v-~~p 211 (340)
T 3gr7_A 133 EMTKADIEETVQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVW-DGP 211 (340)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSC
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhc-CCc
Confidence 4776664 556777777778899998844321 1 111 2 345666777765 789
Q ss_pred EEEEEEEcCCCcccCCCcHH---HHHHHhhcCCCceEEEEcCC---------ChhhhHHHHHHHHhhCCCcEEE
Q 021144 212 AWFSFNSKDGINVVSGDSIL---ECASIADSCEQVVAVGINCT---------SPRFIHGLILSVRKVTSKPVII 273 (317)
Q Consensus 212 v~iSf~~~~~~~l~~G~~l~---~a~~~~~~~~~~~aiGvNC~---------~p~~~~~~l~~l~~~~~~pl~v 273 (317)
|.+-++..+- ...|.+++ +.++.+.+ .+++.|=+-+. .+..-..+++.+++..+.|+++
T Consensus 212 v~vRls~~~~--~~~g~~~~~~~~la~~L~~-~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~~iPVi~ 282 (340)
T 3gr7_A 212 LFVRISASDY--HPDGLTAKDYVPYAKRMKE-QGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREADIPTGA 282 (340)
T ss_dssp EEEEEESCCC--STTSCCGGGHHHHHHHHHH-TTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHTTCCEEE
T ss_pred eEEEeccccc--cCCCCCHHHHHHHHHHHHH-cCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHcCCcEEe
Confidence 9998876432 22344444 45555554 47888776432 2333456788888888889765
No 154
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=71.47 E-value=57 Score=29.24 Aligned_cols=152 Identities=16% Similarity=0.128 Sum_probs=83.8
Q ss_pred ChHHHHHHHHHHHHhhccccc-cccccccHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCC
Q 021144 53 SPHLVRKVHLDYLDAGANIII-TASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (317)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~-TnTy~as~~~l~~~g~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (317)
+.+.+++.-+.++++|.+-|. .-|-+=. .-++.+|-.++++.+++.+. +
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~~GttGE~------~~Ls~~Er~~v~~~~~~~~~------------------------g 68 (294)
T 2ehh_A 19 DYEALGNLIEFHVDNGTDAILVCGTTGES------PTLTFEEHEKVIEFAVKRAA------------------------G 68 (294)
T ss_dssp CHHHHHHHHHHHHTTTCCEEEESSTTTTG------GGSCHHHHHHHHHHHHHHHT------------------------T
T ss_pred CHHHHHHHHHHHHHCCCCEEEECccccCh------hhCCHHHHHHHHHHHHHHhC------------------------C
Confidence 456788888888999999554 3332211 12455666777777765542 2
Q ss_pred CCeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEecc----CCCHHHHHHHHHHHHHhC
Q 021144 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFET----IPNKLEAKAYAELLEEEG 207 (317)
Q Consensus 132 ~~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~ET----~p~~~Ea~a~~~~~~~~~ 207 (317)
+-..|+| +|. .+.++..+ +++...+.|+|.+++=+ -|+.+++..-.+.+.+..
T Consensus 69 rvpviaG-vg~------------------~~t~~ai~----la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~ 125 (294)
T 2ehh_A 69 RIKVIAG-TGG------------------NATHEAVH----LTAHAKEVGADGALVVVPYYNKPTQRGLYEHFKTVAQEV 125 (294)
T ss_dssp SSEEEEE-CCC------------------SCHHHHHH----HHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC
T ss_pred CCcEEEe-cCC------------------CCHHHHHH----HHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc
Confidence 3346666 332 14444433 45666778999997754 246777776666655543
Q ss_pred CCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCCChhhhHHHHH
Q 021144 208 ITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPRFIHGLIL 261 (317)
Q Consensus 208 ~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~~p~~~~~~l~ 261 (317)
++|+++== + .+++.-.-+++...+.+++.+++.+|=--|.....+..+++
T Consensus 126 -~lPiilYn-~--P~~tg~~l~~~~~~~La~~~pnivgiKds~gd~~~~~~~~~ 175 (294)
T 2ehh_A 126 -DIPIIIYN-I--PSRTCVEISVDTMFKLASECENIVASKESTPNMDRISEIVK 175 (294)
T ss_dssp -CSCEEEEE-C--HHHHSCCCCHHHHHHHHHHCTTEEEEEECCSCHHHHHHHHH
T ss_pred -CCCEEEEe-C--CcccCcCCCHHHHHHHHhhCCCEEEEEeCCCCHHHHHHHHH
Confidence 59988422 1 12221223455555554233454444333334455555544
No 155
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=71.42 E-value=10 Score=33.17 Aligned_cols=100 Identities=18% Similarity=0.189 Sum_probs=52.7
Q ss_pred HHHHHhCCCCEEEeccCCCHH--HHHHHHHHHHHhCC-CccEEEEEEEc--CC---CcccC-----CCcHHHHHHHhhcC
Q 021144 174 VLILANSGADLIAFETIPNKL--EAKAYAELLEEEGI-TIPAWFSFNSK--DG---INVVS-----GDSILECASIADSC 240 (317)
Q Consensus 174 i~~l~~~gvD~l~~ET~p~~~--Ea~a~~~~~~~~~~-~~pv~iSf~~~--~~---~~l~~-----G~~l~~a~~~~~~~ 240 (317)
++.+.+.|+|.+++-+..--. +...+.+++++.+. ..++++++.+. ++ -.+.. +.+..+.++.+..
T Consensus 89 i~~~~~~Gad~v~lg~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~d~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~- 167 (266)
T 2w6r_A 89 FLEAFLAGADKALAASVFHFREIDMRELKEYLKKHGGSGQAVVVAIDAKRVDGEFMVFTHSGKKNTGILLRDWVVEVEK- 167 (266)
T ss_dssp HHHHHHHTCSEEECCCCC------CHHHHHHCC----CCCEEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHH-
T ss_pred HHHHHHcCCcHhhhhHHHHhCCCCHHHHHHHHHHcCCCCCEEEEEEEEEecCCCEEEEECCCceecchhHHHHHHHHHH-
Confidence 444555799999988764312 33333333333220 12456677663 21 11211 2456666666654
Q ss_pred CCceEEEEcCCChh-----hhHHHHHHHHhhCCCcEEEE
Q 021144 241 EQVVAVGINCTSPR-----FIHGLILSVRKVTSKPVIIY 274 (317)
Q Consensus 241 ~~~~aiGvNC~~p~-----~~~~~l~~l~~~~~~pl~vy 274 (317)
.++..|.++..... .-..+++.+++..+.|+++-
T Consensus 168 ~G~~~i~~t~~~~~g~~~g~~~~~i~~l~~~~~ipvia~ 206 (266)
T 2w6r_A 168 RGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIAS 206 (266)
T ss_dssp TTCSEEEEEETTTTTTCSCCCHHHHHHHGGGCCSCEEEE
T ss_pred cCCCEEEEEeecCCCCcCCCCHHHHHHHHHHcCCCEEEe
Confidence 47777877653211 11467888888888897654
No 156
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=71.39 E-value=58 Score=29.29 Aligned_cols=147 Identities=16% Similarity=0.160 Sum_probs=74.6
Q ss_pred CeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEecc---CCC------HHHHHHHHHHH
Q 021144 133 PVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFET---IPN------KLEAKAYAELL 203 (317)
Q Consensus 133 ~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~ET---~p~------~~Ea~a~~~~~ 203 (317)
+.+|.|-|=-+.+...||+.| .+.+++.+ +++.+++.|+|+|=+-. -|. -+|++-++.++
T Consensus 5 ~~~imgilN~TpDSFsdgg~~-------~~~~~a~~----~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi 73 (280)
T 1eye_A 5 PVQVMGVLNVTDDSFSDGGCY-------LDLDDAVK----HGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVV 73 (280)
T ss_dssp CCEEEEEEECSCCTTCSSCCC-------CSHHHHHH----HHHHHHHTTCSEEEEECC--------------HHHHHHHH
T ss_pred CcEEEEEEeCCCCCcCCCccc-------CCHHHHHH----HHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHH
Confidence 567888887777777766443 25555554 56777889999995443 233 56666655555
Q ss_pred HHhC-CCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCCC----hhhhHHHHHHHHhhCCCcEEEEeCCC
Q 021144 204 EEEG-ITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTS----PRFIHGLILSVRKVTSKPVIIYPNSG 278 (317)
Q Consensus 204 ~~~~-~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~~----p~~~~~~l~~l~~~~~~pl~vyPNaG 278 (317)
+... .++| +|+- -...+ +++...+. ++.. ||=.+ .+.|.+++. + .+.|+++.++.|
T Consensus 74 ~~l~~~~~p--iSID---------T~~~~-va~aAl~a-Ga~i--INdvsg~~~d~~m~~~~a---~-~~~~vVlmh~~G 134 (280)
T 1eye_A 74 KELAAQGIT--VSID---------TMRAD-VARAALQN-GAQM--VNDVSGGRADPAMGPLLA---E-ADVPWVLMHWRA 134 (280)
T ss_dssp HHHHHTTCC--EEEE---------CSCHH-HHHHHHHT-TCCE--EEETTTTSSCTTHHHHHH---H-HTCCEEEECCCC
T ss_pred HHhhcCCCE--EEEe---------CCCHH-HHHHHHHc-CCCE--EEECCCCCCCHHHHHHHH---H-hCCeEEEEcCCC
Confidence 4421 1244 4552 22222 33333222 3322 44432 233444433 3 378999999988
Q ss_pred CccccccccccccCCCC-----hhhHHHHHHHHHHcccc
Q 021144 279 ETYNAELKKWVVSFSLH-----FFPLELILNPFASCRLI 312 (317)
Q Consensus 279 ~~~d~~~~~w~~~~~~~-----~~~~~~~~~~w~~~~~~ 312 (317)
.+.+-..+ ...|. + -+.+.+.+....+.|+=
T Consensus 135 ~p~tm~~~--~~~y~-dv~~~v~~~l~~~i~~a~~~Gi~ 170 (280)
T 1eye_A 135 VSADTPHV--PVRYG-NVVAEVRADLLASVADAVAAGVD 170 (280)
T ss_dssp SCTTCTTS--CCCCS-SHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCcchhhc--Ccchh-HHHHHHHHHHHHHHHHHHHcCCC
Confidence 64222110 01121 1 23455566666777753
No 157
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=71.25 E-value=74 Score=31.93 Aligned_cols=130 Identities=12% Similarity=0.018 Sum_probs=74.4
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEEEeccCC-------------------CHHHHHHHHHHHHHhCCCccEEEEEEEcCCC
Q 021144 162 SLETLKEFHRRRVLILANSGADLIAFETIP-------------------NKLEAKAYAELLEEEGITIPAWFSFNSKDGI 222 (317)
Q Consensus 162 s~~el~~~h~~qi~~l~~~gvD~l~~ET~p-------------------~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~ 222 (317)
+.+.+..||+.+ .++|+.+|+.|... .+...+.+.+++.+.+ .++++++.=. |
T Consensus 42 ~~~~~~~~~~~~----a~gG~gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vh~~g--~~i~~Ql~h~--G 113 (690)
T 3k30_A 42 DPSAQASMRKIK----AEGGWSAVCTEQVEIHATSDIAPFIELRIWDDQDLPALKRIADAIHEGG--GLAGIELAHN--G 113 (690)
T ss_dssp CHHHHHHHHHHH----HHTTCSEEEEEEEECSGGGCCTTSCCEECSSGGGHHHHHHHHHHHHHTT--CEEEEEEECC--G
T ss_pred ChHHHHHHHHHH----hccCCEEEEecceEeccccccCCCcCCccCCHHHHHHHHHHHHHHHhcC--CEEEEEccCC--c
Confidence 444444444433 45889999888332 1345566777787765 7888887520 1
Q ss_pred cc-----------------c-----CC---------------CcHHHHHHHhhcCCCceEEEEcCCChh-----------
Q 021144 223 NV-----------------V-----SG---------------DSILECASIADSCEQVVAVGINCTSPR----------- 254 (317)
Q Consensus 223 ~l-----------------~-----~G---------------~~l~~a~~~~~~~~~~~aiGvNC~~p~----------- 254 (317)
+- . .+ ..+.++++.+.+ .+.++|=|||.++-
T Consensus 114 r~~~~~~~~~~~~~ps~~~~~~~~~~~~~p~~~t~~ei~~~i~~f~~aA~~a~~-aGfDgVeih~a~gy~L~~qFlsp~~ 192 (690)
T 3k30_A 114 MNAPNQLSRETPLGPGHLPVAPDTIAPIQARAMTKQDIDDLRRWHRNAVRRSIE-AGYDIVYVYGAHGYSGVHHFLSKRY 192 (690)
T ss_dssp GGCCCTTTCCCCEESSSCBSCSSCCCSCBCEECCHHHHHHHHHHHHHHHHHHHH-HTCSEEEEEECTTCSHHHHHHCTTT
T ss_pred ccccccccCCCccCCCCCcccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHH-cCCCEEEEcccccchHHHHhCCCcc
Confidence 10 0 01 123345555544 48999999887543
Q ss_pred ----------------hhHHHHHHHHhhC--CCcEEEEeCCCCccccccccccccCCCChhhHHHHHHHHHHcc
Q 021144 255 ----------------FIHGLILSVRKVT--SKPVIIYPNSGETYNAELKKWVVSFSLHFFPLELILNPFASCR 310 (317)
Q Consensus 255 ----------------~~~~~l~~l~~~~--~~pl~vyPNaG~~~d~~~~~w~~~~~~~~~~~~~~~~~w~~~~ 310 (317)
.+..+++.+++.. +.|+.+.-|..+.++. +.+.+++.++++.. +.|
T Consensus 193 N~R~D~yGGs~enR~r~~~ei~~avr~~~g~~~~v~~r~s~~~~~~~---------g~~~~~~~~~~~~l-~~~ 256 (690)
T 3k30_A 193 NQRTDEYGGSLENRMRLLRELLEDTLDECAGRAAVACRITVEEEIDG---------GITREDIEGVLREL-GEL 256 (690)
T ss_dssp CCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTSSEEEEEEECCCCSTT---------SCCHHHHHHHHHHH-TTS
T ss_pred CCCccccCCCHHHHHHHHHHHHHHHHHHhCCCceEEEEECccccCCC---------CCCHHHHHHHHHHH-Hhh
Confidence 4556666776665 5688888876543211 23455565555444 334
No 158
>2dep_A Xylanase B, thermostable celloxylanase; glycosidase, xylan degradation, family 10, structural genomics, NPPSFA; 1.80A {Clostridium stercorarium}
Probab=71.04 E-value=23 Score=32.90 Aligned_cols=50 Identities=14% Similarity=0.122 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHhCC--CCEEEecc-----CCCHHHHHHHHHHHHHhCCCccEEEE-EEEc
Q 021144 168 EFHRRRVLILANSG--ADLIAFET-----IPNKLEAKAYAELLEEEGITIPAWFS-FNSK 219 (317)
Q Consensus 168 ~~h~~qi~~l~~~g--vD~l~~ET-----~p~~~Ea~a~~~~~~~~~~~~pv~iS-f~~~ 219 (317)
+.+..+++.|.+.| +|.|-+.. .|+..+++..++.+...+ +||||| +.+.
T Consensus 201 ~~~~~~v~~l~~~G~~idgiG~Q~H~~~~~p~~~~~~~~l~~~a~~G--lpi~iTEldv~ 258 (356)
T 2dep_A 201 DILYELVKNLLEKGVPIDGVGHQTHIDIYNPPVERIIESIKKFAGLG--LDNIITELDMS 258 (356)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEEESSCSCHHHHHHHHHHHHTTT--CEEEEEEEEEE
T ss_pred HHHHHHHHHHHHCCCCccEEEeeeeecCCCCCHHHHHHHHHHHHhCC--CeEEEeeceec
Confidence 44666787787766 59998753 378999999998888765 999998 4443
No 159
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=70.88 E-value=21 Score=33.51 Aligned_cols=84 Identities=15% Similarity=0.090 Sum_probs=49.2
Q ss_pred CccEEEEEEEcCCCcccCCCcHHHHHHHhhc-CCCceEEEEcCCChh-----------hhHHHHHHHHhh-------CCC
Q 021144 209 TIPAWFSFNSKDGINVVSGDSILECASIADS-CEQVVAVGINCTSPR-----------FIHGLILSVRKV-------TSK 269 (317)
Q Consensus 209 ~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~-~~~~~aiGvNC~~p~-----------~~~~~l~~l~~~-------~~~ 269 (317)
+.|+.+++.-... +..++++.++.+.. ...+++|=|||++|. .+.++++.+++. +++
T Consensus 146 ~~pv~vniggn~~----t~~~~~dy~~~~~~~~~~ad~ielNisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~ 221 (367)
T 3zwt_A 146 GLPLGVNLGKNKT----SVDAAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRP 221 (367)
T ss_dssp TCCEEEEECCCTT----CSCHHHHHHHHHHHHGGGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGGCC
T ss_pred CceEEEEEecCCC----CCcCHHHHHHHHHHHhhhCCEEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccccCCc
Confidence 4799999932111 23455554443321 124789999998653 345666666543 578
Q ss_pred cEEEEeCCCCccccccccccccCCCChhhHHHHHHHHHHccc
Q 021144 270 PVIIYPNSGETYNAELKKWVVSFSLHFFPLELILNPFASCRL 311 (317)
Q Consensus 270 pl~vyPNaG~~~d~~~~~w~~~~~~~~~~~~~~~~~w~~~~~ 311 (317)
|++|.-..+ .+.++..+.++...++|+
T Consensus 222 Pv~vKi~p~---------------~~~~~~~~ia~~~~~aGa 248 (367)
T 3zwt_A 222 AVLVKIAPD---------------LTSQDKEDIASVVKELGI 248 (367)
T ss_dssp EEEEEECSC---------------CCHHHHHHHHHHHHHHTC
T ss_pred eEEEEeCCC---------------CCHHHHHHHHHHHHHcCC
Confidence 998875432 234456666666666664
No 160
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=70.77 E-value=61 Score=29.28 Aligned_cols=154 Identities=16% Similarity=0.093 Sum_probs=85.7
Q ss_pred ChHHHHHHHHHHHHhhccccc-cccccccHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCC
Q 021144 53 SPHLVRKVHLDYLDAGANIII-TASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (317)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~-TnTy~as~~~l~~~g~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (317)
+.+.+++.-+.++++|.+-|. .-|-+=. .-++.+|-.++++.+++.+. +
T Consensus 31 D~~~l~~lv~~li~~Gv~gl~v~GtTGE~------~~Ls~eEr~~vi~~~~~~~~------------------------g 80 (306)
T 1o5k_A 31 DLESYERLVRYQLENGVNALIVLGTTGES------PTVNEDEREKLVSRTLEIVD------------------------G 80 (306)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSGGGTG------GGCCHHHHHHHHHHHHHHHT------------------------T
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccch------hhCCHHHHHHHHHHHHHHhC------------------------C
Confidence 456788888888999999554 3333211 13466667777777765542 2
Q ss_pred CCeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEecc----CCCHHHHHHHHHHHHHhC
Q 021144 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFET----IPNKLEAKAYAELLEEEG 207 (317)
Q Consensus 132 ~~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~ET----~p~~~Ea~a~~~~~~~~~ 207 (317)
+-+.|+| +|. .+.++..+ +++...+.|+|.+++=+ -|+-+++..-.+.+.+..
T Consensus 81 rvpViaG-vg~------------------~st~~ai~----la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~ 137 (306)
T 1o5k_A 81 KIPVIVG-AGT------------------NSTEKTLK----LVKQAEKLGANGVLVVTPYYNKPTQEGLYQHYKYISERT 137 (306)
T ss_dssp SSCEEEE-CCC------------------SCHHHHHH----HHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTTC
T ss_pred CCeEEEc-CCC------------------ccHHHHHH----HHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhC
Confidence 2346676 232 14444433 45566678999998754 246677666666665543
Q ss_pred CCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCCChhhhHHHHHHH
Q 021144 208 ITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPRFIHGLILSV 263 (317)
Q Consensus 208 ~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~~p~~~~~~l~~l 263 (317)
++|+++== + .+++--.-+++...+.+++.+++.+|=--|.....+..+++..
T Consensus 138 -~lPiilYn-~--P~~tg~~l~~~~~~~La~~~pnIvgiKdssgd~~~~~~~~~~~ 189 (306)
T 1o5k_A 138 -DLGIVVYN-V--PGRTGVNVLPETAARIAADLKNVVGIXEANPDIDQIDRTVSLT 189 (306)
T ss_dssp -SSCEEEEE-C--HHHHSCCCCHHHHHHHHHHCTTEEEEEECCCCHHHHHHHHHHH
T ss_pred -CCCEEEEe-C--ccccCcCCCHHHHHHHHHhCCCEEEEeCCCCCHHHHHHHHHhc
Confidence 69988422 1 1222122345555555423345444444444455555555543
No 161
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=70.47 E-value=60 Score=29.06 Aligned_cols=152 Identities=16% Similarity=0.082 Sum_probs=83.9
Q ss_pred ChHHHHHHHHHHHHhhcccccc-ccccccHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCC
Q 021144 53 SPHLVRKVHLDYLDAGANIIIT-ASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (317)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~T-nTy~as~~~l~~~g~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (317)
+.+.+++.-+.++++|.+-|.. -|-+=. .-++.+|-.++++.+++.+. +
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~~GttGE~------~~Ls~~Er~~v~~~~~~~~~------------------------g 68 (292)
T 2vc6_A 19 DEVALHDLVEWQIEEGSFGLVPCGTTGES------PTLSKSEHEQVVEITIKTAN------------------------G 68 (292)
T ss_dssp CHHHHHHHHHHHHHTTCSEEETTSGGGTG------GGSCHHHHHHHHHHHHHHHT------------------------T
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCh------hhCCHHHHHHHHHHHHHHhC------------------------C
Confidence 4567888888889999996543 332211 13466667777777765542 2
Q ss_pred CCeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEeccC----CCHHHHHHHHHHHHHhC
Q 021144 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI----PNKLEAKAYAELLEEEG 207 (317)
Q Consensus 132 ~~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~ET~----p~~~Ea~a~~~~~~~~~ 207 (317)
+-+.|+| +|. .+.++..+ +++...+.|+|.+++=+= |+-+++..-.+.+.+..
T Consensus 69 r~pviaG-vg~------------------~~t~~ai~----la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~ 125 (292)
T 2vc6_A 69 RVPVIAG-AGS------------------NSTAEAIA----FVRHAQNAGADGVLIVSPYYNKPTQEGIYQHFKAIDAAS 125 (292)
T ss_dssp SSCBEEE-CCC------------------SSHHHHHH----HHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC
T ss_pred CCcEEEe-cCC------------------ccHHHHHH----HHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhC
Confidence 2345676 232 13344433 566677789999987653 46777776666665543
Q ss_pred CCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCCChhhhHHHHH
Q 021144 208 ITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPRFIHGLIL 261 (317)
Q Consensus 208 ~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~~p~~~~~~l~ 261 (317)
++|+++== + .+++.-.-+.+...+.+++.+++.+|=--|.....+..+++
T Consensus 126 -~lPiilYn-~--P~~tg~~l~~~~~~~La~~~pnIvgiK~s~gd~~~~~~~~~ 175 (292)
T 2vc6_A 126 -TIPIIVYN-I--PGRSAIEIHVETLARIFEDCPNVKGVXDATGNLLRPSLERM 175 (292)
T ss_dssp -SSCEEEEE-C--HHHHSCCCCHHHHHHHHHHCTTEEEEEECSCCTHHHHHHHH
T ss_pred -CCCEEEEe-C--ccccCcCCCHHHHHHHHhhCCCEEEEecCCCCHHHHHHHHH
Confidence 59988421 1 12221223455445544313454444333334455554443
No 162
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=70.41 E-value=12 Score=32.19 Aligned_cols=91 Identities=18% Similarity=0.092 Sum_probs=50.6
Q ss_pred HHHHHHHhCCCCEEEeccCCC--H--HHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEE
Q 021144 172 RRVLILANSGADLIAFETIPN--K--LEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVG 247 (317)
Q Consensus 172 ~qi~~l~~~gvD~l~~ET~p~--~--~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiG 247 (317)
++++.+.++|+|.+.+-+... . ..+..+++.+++...+.+++++. .++.++..... .+++.||
T Consensus 92 ~~i~~~~~~Gad~V~l~~~~~~~~~~~~~~~~i~~i~~~~~~~~v~~~~-----------~t~~ea~~a~~--~Gad~i~ 158 (234)
T 1yxy_A 92 TEVDQLAALNIAVIAMDCTKRDRHDGLDIASFIRQVKEKYPNQLLMADI-----------STFDEGLVAHQ--AGIDFVG 158 (234)
T ss_dssp HHHHHHHTTTCSEEEEECCSSCCTTCCCHHHHHHHHHHHCTTCEEEEEC-----------SSHHHHHHHHH--TTCSEEE
T ss_pred HHHHHHHHcCCCEEEEcccccCCCCCccHHHHHHHHHHhCCCCeEEEeC-----------CCHHHHHHHHH--cCCCEEe
Confidence 356678889999998865421 1 12344566666653346766543 13555555444 4788884
Q ss_pred -----EcCCC---hhhhHHHHHHHHhhCCCcEEEEeCCC
Q 021144 248 -----INCTS---PRFIHGLILSVRKVTSKPVIIYPNSG 278 (317)
Q Consensus 248 -----vNC~~---p~~~~~~l~~l~~~~~~pl~vyPNaG 278 (317)
+|-.. ...-..+++++++. +.|++ .++|
T Consensus 159 ~~v~g~~~~~~~~~~~~~~~i~~~~~~-~ipvi--a~GG 194 (234)
T 1yxy_A 159 TTLSGYTPYSRQEAGPDVALIEALCKA-GIAVI--AEGK 194 (234)
T ss_dssp CTTTTSSTTSCCSSSCCHHHHHHHHHT-TCCEE--EESC
T ss_pred eeccccCCCCcCCCCCCHHHHHHHHhC-CCCEE--EECC
Confidence 33211 01113556777665 67754 4555
No 163
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=70.07 E-value=61 Score=28.97 Aligned_cols=152 Identities=16% Similarity=0.126 Sum_probs=83.6
Q ss_pred ChHHHHHHHHHHHHhhcccccc-ccccccHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCC
Q 021144 53 SPHLVRKVHLDYLDAGANIIIT-ASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (317)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~T-nTy~as~~~l~~~g~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (317)
+.+.+++.-+.++++|.+-|.. -|-+=. .-++.+|-.++++.+++.+. +
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~~GttGE~------~~Ls~~Er~~v~~~~~~~~~------------------------g 68 (289)
T 2yxg_A 19 DFDGLEENINFLIENGVSGIVAVGTTGES------PTLSHEEHKKVIEKVVDVVN------------------------G 68 (289)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSTTTTG------GGSCHHHHHHHHHHHHHHHT------------------------T
T ss_pred CHHHHHHHHHHHHHCCCCEEEECccccCh------hhCCHHHHHHHHHHHHHHhC------------------------C
Confidence 4567888888889999995543 332211 12455666777777765542 2
Q ss_pred CCeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEecc----CCCHHHHHHHHHHHHHhC
Q 021144 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFET----IPNKLEAKAYAELLEEEG 207 (317)
Q Consensus 132 ~~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~ET----~p~~~Ea~a~~~~~~~~~ 207 (317)
+-+.|+| +|. .+.++..+ +++...+.|+|.+++=+ -|+-+++..-.+.+.+..
T Consensus 69 r~pviaG-vg~------------------~~t~~ai~----la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~ 125 (289)
T 2yxg_A 69 RVQVIAG-AGS------------------NCTEEAIE----LSVFAEDVGADAVLSITPYYNKPTQEGLRKHFGKVAESI 125 (289)
T ss_dssp SSEEEEE-CCC------------------SSHHHHHH----HHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC
T ss_pred CCcEEEe-CCC------------------CCHHHHHH----HHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc
Confidence 3346666 332 13344433 45566678999997754 246777776666655543
Q ss_pred CCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCCChhhhHHHHH
Q 021144 208 ITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPRFIHGLIL 261 (317)
Q Consensus 208 ~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~~p~~~~~~l~ 261 (317)
++|+++== + .+++--.-+++...+.+++.+++.+|=--|.....+..+++
T Consensus 126 -~lPiilYn-~--P~~tg~~l~~~~~~~La~~~pnivgiK~s~gd~~~~~~~~~ 175 (289)
T 2yxg_A 126 -NLPIVLYN-V--PSRTAVNLEPKTVKLLAEEYSNISAVKEANPNLSQVSELIH 175 (289)
T ss_dssp -SSCEEEEE-C--HHHHSCCCCHHHHHHHHHHCTTEEEEEECCSCTHHHHHHHH
T ss_pred -CCCEEEEe-C--ccccCcCCCHHHHHHHHHhCCCEEEEEeCCCCHHHHHHHHH
Confidence 59988421 1 12221223455555554233454444333334455555543
No 164
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=69.87 E-value=93 Score=31.86 Aligned_cols=65 Identities=11% Similarity=0.123 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHhCCCCEEEec-cC--CCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhh
Q 021144 168 EFHRRRVLILANSGADLIAFE-TI--PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIAD 238 (317)
Q Consensus 168 ~~h~~qi~~l~~~gvD~l~~E-T~--p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~ 238 (317)
+++.+.++.+.+.|+|.|.+= |. -...++..+++++++.-+ .+-++|-+.++ .|..+..++..+.
T Consensus 261 e~~~~~a~~l~~~Ga~~I~l~DT~G~~~P~~v~~lV~~lk~~~p--~~~I~~H~Hnd----~GlAvANslaAve 328 (718)
T 3bg3_A 261 QYYMGLAEELVRAGTHILCIKDMAGLLKPTACTMLVSSLRDRFP--DLPLHIHTHDT----SGAGVAAMLACAQ 328 (718)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECTTSCCCHHHHHHHHHHHHHHST--TCCEEEECCCT----TSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEcCcCCCcCHHHHHHHHHHHHHhCC--CCeEEEEECCC----ccHHHHHHHHHHH
Confidence 466677888888999999665 33 358889999999987532 25567777665 4666666666654
No 165
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=69.78 E-value=60 Score=29.67 Aligned_cols=102 Identities=11% Similarity=0.024 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHHHHHhCC--CCEE--EeccCC----------CHHHH----HHHHHHHHHhC--CCccEEEEEEEcCCCc
Q 021144 164 ETLKEFHRRRVLILANSG--ADLI--AFETIP----------NKLEA----KAYAELLEEEG--ITIPAWFSFNSKDGIN 223 (317)
Q Consensus 164 ~el~~~h~~qi~~l~~~g--vD~l--~~ET~p----------~~~Ea----~a~~~~~~~~~--~~~pv~iSf~~~~~~~ 223 (317)
+++.++-++.++.|.+.| ++++ ..|+.. +...+ +++.+++|+.. ++.++++.+.
T Consensus 107 ~~~~~yt~~vl~~l~~~g~~~~~v~vGNEi~~g~~w~~g~~~~~~~~~~l~~~~~~avR~~~~~p~~~v~ih~~------ 180 (332)
T 1hjs_A 107 WKLYNYTLDAANKLQNAGIQPTIVSIGNEIRAGLLWPTGRTENWANIARLLHSAAWGIKDSSLSPKPKIMIHLD------ 180 (332)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCSEEEESSSGGGEETBTTEETTCHHHHHHHHHHHHHHHHTSCCSSCCEEEEEES------
T ss_pred HHHHHHHHHHHHHHHHcCCCCCEEEEeecccccccCcCCCccCHHHHHHHHHHHHHHHHHhccCCCCeEEEEeC------
Confidence 445666677788887766 5654 446542 33333 34456677654 4456665442
Q ss_pred ccCCCcHH---HHHHHhhcCC-----CceEEEEcCCC-------hhhhHHHHHHHHhhCCCcEEE
Q 021144 224 VVSGDSIL---ECASIADSCE-----QVVAVGINCTS-------PRFIHGLILSVRKVTSKPVII 273 (317)
Q Consensus 224 l~~G~~l~---~a~~~~~~~~-----~~~aiGvNC~~-------p~~~~~~l~~l~~~~~~pl~v 273 (317)
.|..-. --...+.+.. ..|.||+|+=. ++.+...|+.+.+..+||++|
T Consensus 181 --~~~~~~~~~~~~d~~~~~g~~~~~~~DvIG~syYp~w~~~~~~~~l~~~l~~~~~rygKpv~v 243 (332)
T 1hjs_A 181 --NGWDWGTQNWWYTNVLKQGTLELSDFDMMGVSFYPFYSSSATLSALKSSLDNMAKTWNKEIAV 243 (332)
T ss_dssp --CTTCHHHHHHHHHHHHTTSSSCGGGCCEEEEECCSSSCTTCCHHHHHHHHHHHHHHHCCEEEE
T ss_pred --CccchHHHHHHHHHHHhcCCCCCCCcCEEEEecCcccCCCCCHHHHHHHHHHHHHHHCCCEEE
Confidence 232221 1223332222 58999999832 244556666666555899876
No 166
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=69.73 E-value=63 Score=29.02 Aligned_cols=193 Identities=13% Similarity=0.044 Sum_probs=99.9
Q ss_pred ChHHHHHHHHHHHHhhccccc-cccccccHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCC
Q 021144 53 SPHLVRKVHLDYLDAGANIII-TASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (317)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~-TnTy~as~~~l~~~g~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (317)
+.+.+++.-+.++++|++-|. .-|-+=. .-++.+|-.++++.+++.+. +
T Consensus 26 D~~~l~~lv~~li~~Gv~gl~~~GttGE~------~~Ls~~Er~~v~~~~~~~~~------------------------g 75 (297)
T 3flu_A 26 HYEQLRDLIDWHIENGTDGIVAVGTTGES------ATLSVEEHTAVIEAVVKHVA------------------------K 75 (297)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSTTTTG------GGSCHHHHHHHHHHHHHHHT------------------------T
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccCc------ccCCHHHHHHHHHHHHHHhC------------------------C
Confidence 456788888888999999544 3333211 12466666777776665542 2
Q ss_pred CCeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEecc----CCCHHHHHHHHHHHHHhC
Q 021144 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFET----IPNKLEAKAYAELLEEEG 207 (317)
Q Consensus 132 ~~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~ET----~p~~~Ea~a~~~~~~~~~ 207 (317)
+-+.|+| +|. .+.++..+ +++...+.|+|.+++=+ -|+.+++..-.+.+.+..
T Consensus 76 rvpviaG-vg~------------------~~t~~ai~----la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~ 132 (297)
T 3flu_A 76 RVPVIAG-TGA------------------NNTVEAIA----LSQAAEKAGADYTLSVVPYYNKPSQEGIYQHFKTIAEAT 132 (297)
T ss_dssp SSCEEEE-CCC------------------SSHHHHHH----HHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC
T ss_pred CCcEEEe-CCC------------------cCHHHHHH----HHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhC
Confidence 2345666 332 14444443 56667779999998764 246677766666665543
Q ss_pred CCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCCChhhhHHHHHHHHhhCCCcEEEEeCCCCc-cc---c
Q 021144 208 ITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPRFIHGLILSVRKVTSKPVIIYPNSGET-YN---A 283 (317)
Q Consensus 208 ~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~~p~~~~~~l~~l~~~~~~pl~vyPNaG~~-~d---~ 283 (317)
++|+++== + .+++.-.-+++...+.. +.+++.+|=--|.....+..+++. .+..+.+|.-.... .+ .
T Consensus 133 -~lPiilYn-~--P~~tg~~l~~~~~~~La-~~pnivgiKdssgd~~~~~~~~~~----~~~~f~v~~G~d~~~l~~l~~ 203 (297)
T 3flu_A 133 -SIPMIIYN-V--PGRTVVSMTNDTILRLA-EIPNIVGVKEASGNIGSNIELINR----APEGFVVLSGDDHTALPFMLC 203 (297)
T ss_dssp -CSCEEEEE-C--HHHHSSCCCHHHHHHHT-TSTTEEEEEECSCCHHHHHHHHHH----SCTTCEEEECCGGGHHHHHHT
T ss_pred -CCCEEEEE-C--CchhccCCCHHHHHHHH-cCCCEEEEEeCCCCHHHHHHHHHh----cCCCeEEEECcHHHHHHHHhC
Confidence 69998532 1 12222223444444443 444543333333344555544432 22334444322111 00 1
Q ss_pred ccccccc-cCCCChhhHHHHHHHHH
Q 021144 284 ELKKWVV-SFSLHFFPLELILNPFA 307 (317)
Q Consensus 284 ~~~~w~~-~~~~~~~~~~~~~~~w~ 307 (317)
....|.. ....-|+.+.+..+.|.
T Consensus 204 G~~G~is~~an~~P~~~~~l~~a~~ 228 (297)
T 3flu_A 204 GGHGVITVAANAAPKLFADMCRAAL 228 (297)
T ss_dssp TCCEEEESGGGTCHHHHHHHHHHHH
T ss_pred CCCEEEechHhhhHHHHHHHHHHHH
Confidence 1223322 12356777777665554
No 167
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=69.64 E-value=46 Score=29.87 Aligned_cols=105 Identities=13% Similarity=0.141 Sum_probs=62.7
Q ss_pred ChHHHHHHHHHHHHhhccccc-cccccccHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCC
Q 021144 53 SPHLVRKVHLDYLDAGANIII-TASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (317)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~-TnTy~as~~~l~~~g~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (317)
+.+.+++.-+.++++|.+-|. .-|-+=. .-++.+|-.++++.+++.+ .
T Consensus 18 D~~~l~~lv~~li~~Gv~gl~~~GttGE~------~~Ls~eEr~~v~~~~~~~~-------------------------~ 66 (293)
T 1w3i_A 18 DKEKLKIHAENLIRKGIDKLFVNGTTGLG------PSLSPEEKLENLKAVYDVT-------------------------N 66 (293)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSTTTTG------GGSCHHHHHHHHHHHHTTC-------------------------S
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCh------hhCCHHHHHHHHHHHHHHc-------------------------C
Confidence 456788888888999999444 3333211 1245566666665555322 1
Q ss_pred CCeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEeccC-----CCHHHHHHHHHHHHHh
Q 021144 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI-----PNKLEAKAYAELLEEE 206 (317)
Q Consensus 132 ~~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~ET~-----p~~~Ea~a~~~~~~~~ 206 (317)
. .|+| +|. .+.++..+ +++...+.|+|.+++=+= |+.+++..-.+.+.+.
T Consensus 67 -g-viaG-vg~------------------~~t~~ai~----la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a 121 (293)
T 1w3i_A 67 -K-IIFQ-VGG------------------LNLDDAIR----LAKLSKDFDIVGIASYAPYYYPRMSEKHLVKYFKTLCEV 121 (293)
T ss_dssp -C-EEEE-CCC------------------SCHHHHHH----HHHHGGGSCCSEEEEECCCSCSSCCHHHHHHHHHHHHHH
T ss_pred -C-EEEe-cCC------------------CCHHHHHH----HHHHHHhcCCCEEEEcCCCCCCCCCHHHHHHHHHHHHhh
Confidence 2 5666 232 13444433 566677789999977543 5667766666655554
Q ss_pred CCCccEEE
Q 021144 207 GITIPAWF 214 (317)
Q Consensus 207 ~~~~pv~i 214 (317)
. ++|+++
T Consensus 122 ~-~lPiil 128 (293)
T 1w3i_A 122 S-PHPVYL 128 (293)
T ss_dssp C-SSCEEE
T ss_pred C-CCCEEE
Confidence 3 589884
No 168
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=69.62 E-value=14 Score=33.19 Aligned_cols=89 Identities=17% Similarity=0.241 Sum_probs=47.9
Q ss_pred HHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEE-EcC-C
Q 021144 174 VLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVG-INC-T 251 (317)
Q Consensus 174 i~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiG-vNC-~ 251 (317)
++.+.++|+|.+++=-+|. +|....++.+++.+ ++.+ .+ + .+.++.+.+........+...+. +.- |
T Consensus 112 ~~~~~~aG~dGviv~Dl~~-ee~~~~~~~~~~~g--l~~i-~l-i------ap~s~~eri~~ia~~~~gfiy~vs~~G~T 180 (271)
T 1ujp_A 112 FGLFKQAGATGVILPDLPP-DEDPGLVRLAQEIG--LETV-FL-L------APTSTDARIATVVRHATGFVYAVSVTGVT 180 (271)
T ss_dssp HHHHHHHTCCEEECTTCCG-GGCHHHHHHHHHHT--CEEE-CE-E------CTTCCHHHHHHHHTTCCSCEEEECC----
T ss_pred HHHHHHcCCCEEEecCCCH-HHHHHHHHHHHHcC--CceE-EE-e------CCCCCHHHHHHHHHhCCCCEEEEecCccc
Confidence 4557778999888766664 77888888888876 4422 11 1 12234443333333333433221 110 1
Q ss_pred C-----hhhhHHHHHHHHhhCCCcEEE
Q 021144 252 S-----PRFIHGLILSVRKVTSKPVII 273 (317)
Q Consensus 252 ~-----p~~~~~~l~~l~~~~~~pl~v 273 (317)
+ +.....+++.+++.++.|+++
T Consensus 181 G~~~~~~~~~~~~v~~vr~~~~~Pv~v 207 (271)
T 1ujp_A 181 GMRERLPEEVKDLVRRIKARTALPVAV 207 (271)
T ss_dssp --------CCHHHHHHHHTTCCSCEEE
T ss_pred CCCCCCCccHHHHHHHHHhhcCCCEEE
Confidence 1 233456777777777777654
No 169
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=69.56 E-value=34 Score=31.19 Aligned_cols=87 Identities=18% Similarity=0.130 Sum_probs=52.2
Q ss_pred HHHHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcC
Q 021144 171 RRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINC 250 (317)
Q Consensus 171 ~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC 250 (317)
.++++.+.+.|+|++.+= ..+.. .+++.+++.+ .|++.++ .+++++....+ .++++|.+..
T Consensus 92 ~~~~~~~~~~g~d~V~l~-~g~p~---~~~~~l~~~g--~~v~~~v-----------~s~~~a~~a~~--~GaD~i~v~g 152 (326)
T 3bo9_A 92 DDLVKVCIEEKVPVVTFG-AGNPT---KYIRELKENG--TKVIPVV-----------ASDSLARMVER--AGADAVIAEG 152 (326)
T ss_dssp HHHHHHHHHTTCSEEEEE-SSCCH---HHHHHHHHTT--CEEEEEE-----------SSHHHHHHHHH--TTCSCEEEEC
T ss_pred HHHHHHHHHCCCCEEEEC-CCCcH---HHHHHHHHcC--CcEEEEc-----------CCHHHHHHHHH--cCCCEEEEEC
Confidence 456777888999999873 22222 3455666654 8888754 24555554443 3677777743
Q ss_pred ---CC---hhhhHHHHHHHHhhCCCcEEEEeCCC
Q 021144 251 ---TS---PRFIHGLILSVRKVTSKPVIIYPNSG 278 (317)
Q Consensus 251 ---~~---p~~~~~~l~~l~~~~~~pl~vyPNaG 278 (317)
.+ ...-..+++++.+..+.|++ .++|
T Consensus 153 ~~~GG~~G~~~~~~ll~~i~~~~~iPvi--aaGG 184 (326)
T 3bo9_A 153 MESGGHIGEVTTFVLVNKVSRSVNIPVI--AAGG 184 (326)
T ss_dssp TTSSEECCSSCHHHHHHHHHHHCSSCEE--EESS
T ss_pred CCCCccCCCccHHHHHHHHHHHcCCCEE--EECC
Confidence 11 11234667777776678854 4455
No 170
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=69.42 E-value=69 Score=29.87 Aligned_cols=75 Identities=16% Similarity=0.013 Sum_probs=45.4
Q ss_pred HHHHHHHhhcCCCceEEEEcCCC---------h-----------------hhhHHHHHHHHhhCC-CcEEEEeCCCCccc
Q 021144 230 ILECASIADSCEQVVAVGINCTS---------P-----------------RFIHGLILSVRKVTS-KPVIIYPNSGETYN 282 (317)
Q Consensus 230 l~~a~~~~~~~~~~~aiGvNC~~---------p-----------------~~~~~~l~~l~~~~~-~pl~vyPNaG~~~d 282 (317)
+.++++.+.+ .+.++|=|||.+ | ..+..+++.+++... .||++.-+.+..++
T Consensus 169 f~~AA~~a~~-aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~V~vrls~~~~~~ 247 (376)
T 1icp_A 169 FRVAARNAIE-AGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISPFAHYN 247 (376)
T ss_dssp HHHHHHHHHH-TTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCTT
T ss_pred HHHHHHHHHH-cCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCCceEEEeccccccC
Confidence 3445555544 589999999964 2 124566677777653 29999888754332
Q ss_pred cccccccccCCCChhhHHHHHHHHHHccc
Q 021144 283 AELKKWVVSFSLHFFPLELILNPFASCRL 311 (317)
Q Consensus 283 ~~~~~w~~~~~~~~~~~~~~~~~w~~~~~ 311 (317)
+.. ...+.+.+.++++...+.|+
T Consensus 248 g~~------~~~~~~~~~~la~~le~~Gv 270 (376)
T 1icp_A 248 EAG------DTNPTALGLYMVESLNKYDL 270 (376)
T ss_dssp TCC------CSCHHHHHHHHHHHHGGGCC
T ss_pred CCC------CCCCHHHHHHHHHHHHHcCC
Confidence 211 11234567777777777764
No 171
>1l6s_A Porphobilinogen synthase; dehydratase, lyase; HET: CME DSB; 1.70A {Escherichia coli} SCOP: c.1.10.3 PDB: 1i8j_A* 1l6y_A* 1b4e_A
Probab=69.31 E-value=70 Score=29.41 Aligned_cols=223 Identities=16% Similarity=0.128 Sum_probs=133.3
Q ss_pred HHHHHHHHHHHHhhccccccccccccHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCCC
Q 021144 55 HLVRKVHLDYLDAGANIIITASYQATIQGFEAK-GFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSRP 133 (317)
Q Consensus 55 e~V~~iH~~Yl~AGAdiI~TnTy~as~~~l~~~-g~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (317)
+.+.+.-++-++.|-.-|.. |+. +.. ++. |-+...-.-++.+|++..|++. .+
T Consensus 58 d~l~~~~~~~~~lGi~~v~L--Fgv-p~~-Kd~~gs~A~~~~g~v~rair~iK~~~----------------------pd 111 (323)
T 1l6s_A 58 KHLAREIERIANAGIRSVMT--FGI-SHH-TDETGSDAWREDGLVARMSRICKQTV----------------------PE 111 (323)
T ss_dssp GGHHHHHHHHHHHTCCEEEE--EEE-CSS-CBSSCGGGGSTTSHHHHHHHHHHHHC----------------------TT
T ss_pred HHHHHHHHHHHHCCCCEEEE--eCC-CCC-CCccccccCCCCCcHHHHHHHHHHHC----------------------CC
Confidence 45666667788899775543 333 111 111 1110011247888888777543 13
Q ss_pred eEEEEe--eCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCC-Cc
Q 021144 134 VLVAAS--VGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGI-TI 210 (317)
Q Consensus 134 ~~Vags--iGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~-~~ 210 (317)
.+|..+ +-||-..-++|---.| .+.-++-.+...+|+-..+++|+|+++==-|-+- .+.+|.+++.+.+- +.
T Consensus 112 l~vitDvcLc~YT~HGHcGil~~g----~V~ND~Tl~~Lak~Als~A~AGAdiVAPSdMMDG-rV~aIR~aLd~~G~~~v 186 (323)
T 1l6s_A 112 MIVMSDTCFCEYTSHGHCGVLCEH----GVDNDATLENLGKQAVVAAAAGADFIAPSAAMDG-QVQAIRQALDAAGFKDT 186 (323)
T ss_dssp SEEEEEECSTTTBSSCCSSCBCSS----SBCHHHHHHHHHHHHHHHHHHTCSEEEECSCCTT-HHHHHHHHHHHTTCTTC
T ss_pred eEEEEeeeccccCCCCceEeccCC----cCccHHHHHHHHHHHHHHHHcCCCeEeccccccc-HHHHHHHHHHhCCCCCc
Confidence 455554 4566554444432111 2677888888888999999999999997777765 46788888888763 34
Q ss_pred cEEEEEEEcCC----------------C----cccCCCcHHHHHHHhh--cCCCceEEEEcCCChhhhHHHHHHHHhhCC
Q 021144 211 PAWFSFNSKDG----------------I----NVVSGDSILECASIAD--SCEQVVAVGINCTSPRFIHGLILSVRKVTS 268 (317)
Q Consensus 211 pv~iSf~~~~~----------------~----~l~~G~~l~~a~~~~~--~~~~~~aiGvNC~~p~~~~~~l~~l~~~~~ 268 (317)
|++ |.+.+=. | .-.|--.-.+++..+. -..|.+.|.|-=.-| -+.+++.+++.++
T Consensus 187 ~Im-sYsaKyASafYGPFRdAa~Sap~GDRktYQmdpaN~~EAlre~~~Di~EGAD~vMVKPal~--YLDIi~~vk~~~~ 263 (323)
T 1l6s_A 187 AIM-SYSTKFASSFYGPFREAAGSALKGDRKSYQMNPMNRREAIRESLLDEAQGADCLMVKPAGA--YLDIVRELRERTE 263 (323)
T ss_dssp EEB-CCCEEBCCSCCHHHHHHHTCCCSSCCTTTSBCTTCHHHHHHHHHHHHHTTCSBEEEESCTT--CHHHHHHHHTTCS
T ss_pred eee-ehhHHHhHHhhHHHHHHhcCCCCCCccccCCCCCCHHHHHHHHHhhHHhCCceEEEecCcc--hhHHHHHHHHhcC
Confidence 443 5443210 0 1112223344444432 124788888876644 2567888888889
Q ss_pred CcEEEEeCCCCc---cccccccccccCCCChhhHHHHHHHHHHccccccc
Q 021144 269 KPVIIYPNSGET---YNAELKKWVVSFSLHFFPLELILNPFASCRLISFF 315 (317)
Q Consensus 269 ~pl~vyPNaG~~---~d~~~~~w~~~~~~~~~~~~~~~~~w~~~~~~~~~ 315 (317)
.|+.+|-=+||- .-...+.|.. ......+....+.++|.=-|+
T Consensus 264 ~P~aaYqVSGEYAMikaAa~~GwiD----~~~~vlEsl~~~kRAGAd~Ii 309 (323)
T 1l6s_A 264 LPIGAYQVSGEYAMIKFAALAGAID----EEKVVLESLGSIKRAGADLIF 309 (323)
T ss_dssp SCEEEEECHHHHHHHHHHHHTTSSC----HHHHHHHHHHHHHHTTCSEEE
T ss_pred CCeEEEEcCcHHHHHHHHHHcCCcc----HHHHHHHHHHHHHhcCCCEEe
Confidence 999999999962 3333467852 123466777777777764443
No 172
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=69.11 E-value=16 Score=33.72 Aligned_cols=94 Identities=13% Similarity=0.006 Sum_probs=61.4
Q ss_pred HHHHHhCCCCEEEeccC-CCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHH---HhhcCCCceEEEEc
Q 021144 174 VLILANSGADLIAFETI-PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECAS---IADSCEQVVAVGIN 249 (317)
Q Consensus 174 i~~l~~~gvD~l~~ET~-p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~---~~~~~~~~~aiGvN 249 (317)
++...++|+|.+.+=+- ...++++.+++++++.+ +.+..++. +. ..++++.+++ .+.. .++..|.+.
T Consensus 99 i~~a~~aGvd~v~I~~~~s~~~~~~~~i~~ak~~G--~~v~~~~~--~a----~~~~~e~~~~ia~~~~~-~Ga~~i~l~ 169 (345)
T 1nvm_A 99 LKNAYQAGARVVRVATHCTEADVSKQHIEYARNLG--MDTVGFLM--MS----HMIPAEKLAEQGKLMES-YGATCIYMA 169 (345)
T ss_dssp HHHHHHHTCCEEEEEEETTCGGGGHHHHHHHHHHT--CEEEEEEE--ST----TSSCHHHHHHHHHHHHH-HTCSEEEEE
T ss_pred HHHHHhCCcCEEEEEEeccHHHHHHHHHHHHHHCC--CEEEEEEE--eC----CCCCHHHHHHHHHHHHH-CCCCEEEEC
Confidence 44455679998866542 23467888888888877 55555553 22 2344544444 3333 356666665
Q ss_pred CC----ChhhhHHHHHHHHhhC--CCcEEEEeC
Q 021144 250 CT----SPRFIHGLILSVRKVT--SKPVIIYPN 276 (317)
Q Consensus 250 C~----~p~~~~~~l~~l~~~~--~~pl~vyPN 276 (317)
=+ .|..+..+++.+++.. +.||.+...
T Consensus 170 DT~G~~~P~~v~~lv~~l~~~~~~~~pi~~H~H 202 (345)
T 1nvm_A 170 DSGGAMSMNDIRDRMRAFKAVLKPETQVGMHAH 202 (345)
T ss_dssp CTTCCCCHHHHHHHHHHHHHHSCTTSEEEEECB
T ss_pred CCcCccCHHHHHHHHHHHHHhcCCCceEEEEEC
Confidence 33 3899999999999988 789888653
No 173
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=68.88 E-value=54 Score=29.64 Aligned_cols=83 Identities=12% Similarity=0.082 Sum_probs=50.8
Q ss_pred HHHHHHHHhCCCCEEEec-cCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEc
Q 021144 171 RRRVLILANSGADLIAFE-TIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGIN 249 (317)
Q Consensus 171 ~~qi~~l~~~gvD~l~~E-T~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvN 249 (317)
.++++.+.+.|+|++.+- ..| ...++.+++.+ +|++.++ .++.++....+ .++++|.+.
T Consensus 86 ~~~~~~~~~~g~d~V~~~~g~p-----~~~~~~l~~~g--i~vi~~v-----------~t~~~a~~~~~--~GaD~i~v~ 145 (328)
T 2gjl_A 86 AEYRAAIIEAGIRVVETAGNDP-----GEHIAEFRRHG--VKVIHKC-----------TAVRHALKAER--LGVDAVSID 145 (328)
T ss_dssp HHHHHHHHHTTCCEEEEEESCC-----HHHHHHHHHTT--CEEEEEE-----------SSHHHHHHHHH--TTCSEEEEE
T ss_pred HHHHHHHHhcCCCEEEEcCCCc-----HHHHHHHHHcC--CCEEeeC-----------CCHHHHHHHHH--cCCCEEEEE
Confidence 456778888999999764 223 23455667654 8888554 24555555444 467777773
Q ss_pred C---C-C--h--hhhHHHHHHHHhhCCCcEEE
Q 021144 250 C---T-S--P--RFIHGLILSVRKVTSKPVII 273 (317)
Q Consensus 250 C---~-~--p--~~~~~~l~~l~~~~~~pl~v 273 (317)
. . + . .....+++++++..+.|+++
T Consensus 146 g~~~GG~~G~~~~~~~~~l~~v~~~~~iPvia 177 (328)
T 2gjl_A 146 GFECAGHPGEDDIPGLVLLPAAANRLRVPIIA 177 (328)
T ss_dssp CTTCSBCCCSSCCCHHHHHHHHHTTCCSCEEE
T ss_pred CCCCCcCCCCccccHHHHHHHHHHhcCCCEEE
Confidence 2 1 1 1 12346778887777788654
No 174
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=68.14 E-value=52 Score=29.42 Aligned_cols=105 Identities=14% Similarity=0.153 Sum_probs=62.8
Q ss_pred ChHHHHHHHHHHHHhhccccc-cccccccHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCC
Q 021144 53 SPHLVRKVHLDYLDAGANIII-TASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (317)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~-TnTy~as~~~l~~~g~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (317)
+.+.+++.-+.++++|.+-|. .-|-+=. .-++.+|-.++++.+++.+ .
T Consensus 18 D~~~l~~lv~~li~~Gv~gl~v~GtTGE~------~~Ls~eEr~~v~~~~~~~~-------------------------~ 66 (288)
T 2nuw_A 18 NVDALKTHAKNLLEKGIDAIFVNGTTGLG------PALSKDEKRQNLNALYDVT-------------------------H 66 (288)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEETSTTTTG------GGSCHHHHHHHHHHHTTTC-------------------------S
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCh------hhCCHHHHHHHHHHHHHHh-------------------------C
Confidence 456788888888999999554 3332211 1245566666655555322 1
Q ss_pred CCeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEeccC-----CCHHHHHHHHHHHHHh
Q 021144 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI-----PNKLEAKAYAELLEEE 206 (317)
Q Consensus 132 ~~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~ET~-----p~~~Ea~a~~~~~~~~ 206 (317)
. .|+| +|. .+.++..+ +++...+.|+|.+++=+= |+-+++..-.+.+.+.
T Consensus 67 -g-ViaG-vg~------------------~~t~~ai~----la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a 121 (288)
T 2nuw_A 67 -K-LIFQ-VGS------------------LNLNDVME----LVKFSNEMDILGVSSHSPYYFPRLPEKFLAKYYEEIARI 121 (288)
T ss_dssp -C-EEEE-CCC------------------SCHHHHHH----HHHHHHTSCCSEEEECCCCSSCSCCHHHHHHHHHHHHHH
T ss_pred -C-eEEe-eCC------------------CCHHHHHH----HHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHh
Confidence 2 6666 332 14444433 566677799999987542 5667776666655554
Q ss_pred CCCccEEE
Q 021144 207 GITIPAWF 214 (317)
Q Consensus 207 ~~~~pv~i 214 (317)
. ++|+++
T Consensus 122 ~-~lPiil 128 (288)
T 2nuw_A 122 S-SHSLYI 128 (288)
T ss_dssp C-CSCEEE
T ss_pred c-CCCEEE
Confidence 3 589884
No 175
>1w1z_A Delta-aminolevulinic acid dehydratase; synthase, tetrapyrrole biosynthesis, ALAD, porphyrin biosynt heme biosynthesis, lyase; 2.6A {Prosthecochloris vibrioformis} SCOP: c.1.10.3 PDB: 2c1h_A*
Probab=68.14 E-value=75 Score=29.28 Aligned_cols=222 Identities=16% Similarity=0.166 Sum_probs=132.1
Q ss_pred HHHHHHHHHHHHhhccccccccccccHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCCC
Q 021144 55 HLVRKVHLDYLDAGANIIITASYQATIQGFEAK-GFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSRP 133 (317)
Q Consensus 55 e~V~~iH~~Yl~AGAdiI~TnTy~as~~~l~~~-g~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (317)
+.+.+.-++-++.|-.-|.. |+. +.. ++. |-+...-.-++.+|++..|++. .+
T Consensus 64 d~l~~~~~~~~~lGi~~v~L--Fgv-p~~-Kd~~gs~A~~~~g~v~rair~iK~~~----------------------p~ 117 (328)
T 1w1z_A 64 DRAVEECKELYDLGIQGIDL--FGI-PEQ-KTEDGSEAYNDNGILQQAIRAIKKAV----------------------PE 117 (328)
T ss_dssp HHHHHHHHHHHHHTCCEEEE--EEC-CSS-CCSSCGGGGCTTSHHHHHHHHHHHHS----------------------TT
T ss_pred HHHHHHHHHHHHCCCCEEEE--ECC-CCC-CCccccccCCCCChHHHHHHHHHHHC----------------------CC
Confidence 56777778888999875544 333 111 121 1110011248888888877653 13
Q ss_pred eEEEEe--eCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCC-Cc
Q 021144 134 VLVAAS--VGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGI-TI 210 (317)
Q Consensus 134 ~~Vags--iGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~-~~ 210 (317)
.+|..+ +-||-..=++|--..| .+.-++-.+...+|+-..+++|+|+++==-|-+- .+.+|.+++.+.+- ++
T Consensus 118 l~vitDvcLc~YT~HGHcGil~~g----~V~ND~Tl~~L~k~Als~A~AGADiVAPSdMMDG-rV~aIR~aLd~~G~~~v 192 (328)
T 1w1z_A 118 LCIMTDVALDPFTPFGHDGLVKDG----IILNDETVEVLQKMAVSHAEAGADFVSPSDMMDG-RIGAIREALDETDHSDV 192 (328)
T ss_dssp SEEEEEECSTTTSTTSCSSEESSS----CEEHHHHHHHHHHHHHHHHHHTCSEEEECSCCTT-HHHHHHHHHHHTTCTTS
T ss_pred eEEEEeeecccCCCCCceeeccCC----cCccHHHHHHHHHHHHHHHHcCCCeEeccccccc-HHHHHHHHHHhCCCCCc
Confidence 455554 4566544333322111 1567788888888999999999999997777765 35788888888763 34
Q ss_pred cEEEEEEEcCC------------C----------cccCCCcHHHHHHHhh--cCCCceEEEEcCCChhhhHHHHHHHHhh
Q 021144 211 PAWFSFNSKDG------------I----------NVVSGDSILECASIAD--SCEQVVAVGINCTSPRFIHGLILSVRKV 266 (317)
Q Consensus 211 pv~iSf~~~~~------------~----------~l~~G~~l~~a~~~~~--~~~~~~aiGvNC~~p~~~~~~l~~l~~~ 266 (317)
|++ |.+.+=. . .+..+. -.+|+..+. -..|.+.|.|-=.-| -+.+++.+++.
T Consensus 193 ~Im-sYsaKyASafYGPFRdAa~Sap~fGDrktYQmdpaN-~~EAlrE~~~Di~EGAD~vMVKPal~--YLDIir~vk~~ 268 (328)
T 1w1z_A 193 GIL-SYAAKYASSFYGPFRDALHSAPQFGDKSTYQMNPAN-TEEAMKEVELDIVEGADIVMVKPGLA--YLDIVWRTKER 268 (328)
T ss_dssp EEE-EEEEEBCCTTCHHHHHHTTCCCCCSCSTTTSBCTTC-SHHHHHHHHHHHHHTCSEEEEESCGG--GHHHHHHHHHH
T ss_pred eee-ehhHHHhhhccchHHHHhccCCCCCCccccCCCCCC-HHHHHHHHHhhHHhCCCEEEEcCCCc--hHHHHHHHHHh
Confidence 544 6654310 0 011121 223443331 124789998876543 34677888888
Q ss_pred CCCcEEEEeCCCCc---cccccccccccCCCChhhHHHHHHHHHHccccccc
Q 021144 267 TSKPVIIYPNSGET---YNAELKKWVVSFSLHFFPLELILNPFASCRLISFF 315 (317)
Q Consensus 267 ~~~pl~vyPNaG~~---~d~~~~~w~~~~~~~~~~~~~~~~~w~~~~~~~~~ 315 (317)
++.|+.+|-=+||- .-...+.|.+. .....+....+.++|.=-||
T Consensus 269 ~~~P~aaYqVSGEYAMikaAa~~GwiD~----~~~v~Esl~~~kRAGAd~Ii 316 (328)
T 1w1z_A 269 FDVPVAIYHVSGEYAMVKAAAAKGWIDE----DRVMMESLLCMKRAGADIIF 316 (328)
T ss_dssp HCSCEEEEECHHHHHHHHHHHHTTSSCH----HHHHHHHHHHHHHHTCSEEE
T ss_pred cCCCEEEEEccHHHHHHHHHHHcCCccH----HHHHHHHHHHHHhcCCCEEe
Confidence 89999999999962 33334677521 23466666777777754433
No 176
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=68.04 E-value=13 Score=32.98 Aligned_cols=49 Identities=27% Similarity=0.241 Sum_probs=36.6
Q ss_pred HHHHHHHhCCCCEEEe-----ccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcC
Q 021144 172 RRVLILANSGADLIAF-----ETIPNKLEAKAYAELLEEEGITIPAWFSFNSKD 220 (317)
Q Consensus 172 ~qi~~l~~~gvD~l~~-----ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~ 220 (317)
+.++.+.++|+|.+-+ -.+|++..-..+++.+|+..+++|+-+-+-+.+
T Consensus 44 ~~i~~l~~~G~d~lHvDVmDg~FVpnit~G~~~v~~lr~~~p~~~ldvHLmv~~ 97 (246)
T 3inp_A 44 DDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGITAGMDVHLMVKP 97 (246)
T ss_dssp HHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHHHHTCCSCEEEEEECSS
T ss_pred HHHHHHHHcCCCEEEEEecCCCcCcchhcCHHHHHHHHHhCCCCeEEEEEeeCC
Confidence 4677788899998876 456787777778888887654688888777654
No 177
>2nu8_B SCS-beta, succinyl-COA synthetase beta chain; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.23.4.1 d.142.1.4 PDB: 1scu_B* 2nu6_B* 1jkj_B* 2nu7_B* 2nu9_B* 2nua_B* 2scu_B* 1jll_B* 1cqj_B* 1cqi_B*
Probab=67.74 E-value=42 Score=31.58 Aligned_cols=67 Identities=18% Similarity=0.222 Sum_probs=47.5
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEecc---CCCH-HHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHH
Q 021144 161 VSLETLKEFHRRRVLILANSGADLIAFET---IPNK-LEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASI 236 (317)
Q Consensus 161 ~s~~el~~~h~~qi~~l~~~gvD~l~~ET---~p~~-~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~ 236 (317)
.+.+.++..++- .+.+..||.+++-. +.+. .-++.+++++++.+.++|+++.+ .|+..++..+.
T Consensus 293 a~~~~~~~~~~~---il~d~~v~~ilvni~ggi~~~~~vA~gii~a~~~~~~~~pivvrl---------~G~n~~~g~~~ 360 (388)
T 2nu8_B 293 ATKERVTEAFKI---ILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRL---------EGNNAELGAKK 360 (388)
T ss_dssp CCHHHHHHHHHH---HHTSTTCCEEEEEEESCSSCHHHHHHHHHHHHHHHTCCSCEEEEE---------ESTTHHHHHHH
T ss_pred CCHHHHHHHHHH---HhcCCCCCEEEEEecCCcCCchHHHHHHHHHHHhcCCCCeEEEEe---------CCCCHHHHHHH
Confidence 466766666652 24568899998744 3443 34678999999865569999865 57888888888
Q ss_pred hhc
Q 021144 237 ADS 239 (317)
Q Consensus 237 ~~~ 239 (317)
+.+
T Consensus 361 l~~ 363 (388)
T 2nu8_B 361 LAD 363 (388)
T ss_dssp HHT
T ss_pred HHH
Confidence 865
No 178
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=67.73 E-value=9.8 Score=34.22 Aligned_cols=58 Identities=22% Similarity=0.191 Sum_probs=39.2
Q ss_pred hCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEc
Q 021144 179 NSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGIN 249 (317)
Q Consensus 179 ~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvN 249 (317)
++|+|+|.+-|+. +++++.+++.++...++.|+.+|- |-+++.+.+.+. .++++||+-
T Consensus 200 ~aGaD~I~ld~~~-~~~l~~~v~~l~~~~~~~~i~AsG----------GI~~~ni~~~~~--aGaD~i~vG 257 (273)
T 2b7n_A 200 NAGADIVMCDNLS-VLETKEIAAYRDAHYPFVLLEASG----------NISLESINAYAK--SGVDAISVG 257 (273)
T ss_dssp HHTCSEEEEETCC-HHHHHHHHHHHHHHCTTCEEEEES----------SCCTTTHHHHHT--TTCSEEECT
T ss_pred HcCCCEEEECCCC-HHHHHHHHHHhhccCCCcEEEEEC----------CCCHHHHHHHHH--cCCcEEEEc
Confidence 4689999999964 788888888777543456776554 344444555544 477888773
No 179
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=67.59 E-value=69 Score=28.64 Aligned_cols=152 Identities=10% Similarity=-0.014 Sum_probs=81.8
Q ss_pred ChHHHHHHHHHHHHhhccccc-cccccccHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCC
Q 021144 53 SPHLVRKVHLDYLDAGANIII-TASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (317)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~-TnTy~as~~~l~~~g~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (317)
+.+.+++.-+.++++|.+-|. .-|-+=. .-++.+|-.++++.+++.+. +
T Consensus 20 D~~~l~~lv~~li~~Gv~gl~~~GttGE~------~~Ls~~Er~~v~~~~~~~~~------------------------g 69 (291)
T 3a5f_A 20 DFDKLSELIEWHIKSKTDAIIVCGTTGEA------TTMTETERKETIKFVIDKVN------------------------K 69 (291)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSGGGTG------GGSCHHHHHHHHHHHHHHHT------------------------T
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCh------hhCCHHHHHHHHHHHHHHhC------------------------C
Confidence 567788888888999999554 3333211 12455666777777765542 2
Q ss_pred CCeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEeccC----CCHHHHHHHHHHHHHhC
Q 021144 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI----PNKLEAKAYAELLEEEG 207 (317)
Q Consensus 132 ~~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~ET~----p~~~Ea~a~~~~~~~~~ 207 (317)
+-+.|+| +|. .+.++..+ +++...+.|+|.+++=+= |+-+++..-.+.+.+..
T Consensus 70 r~pvi~G-vg~------------------~~t~~ai~----la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~ 126 (291)
T 3a5f_A 70 RIPVIAG-TGS------------------NNTAASIA----MSKWAESIGVDGLLVITPYYNKTTQKGLVKHFKAVSDAV 126 (291)
T ss_dssp SSCEEEE-CCC------------------SSHHHHHH----HHHHHHHTTCSEEEEECCCSSCCCHHHHHHHC-CTGGGC
T ss_pred CCcEEEe-CCc------------------ccHHHHHH----HHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhc
Confidence 2346676 332 13444433 566677799999987542 45666555444444433
Q ss_pred CCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCCChhhhHHHHHH
Q 021144 208 ITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPRFIHGLILS 262 (317)
Q Consensus 208 ~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~~p~~~~~~l~~ 262 (317)
++|+++== + .+++--.-+.+...+.+ +.+++.+|=--|.....+..+++.
T Consensus 127 -~lPiilYn-~--P~~tg~~l~~~~~~~La-~~pnivgiK~s~gd~~~~~~~~~~ 176 (291)
T 3a5f_A 127 -STPIIIYN-V--PGRTGLNITPGTLKELC-EDKNIVAVXEASGNISQIAQIKAL 176 (291)
T ss_dssp -CSCEEEEE-C--HHHHSCCCCHHHHHHHT-TSTTEEEEEECSCCHHHHHHHHHH
T ss_pred -CCCEEEEe-C--ccccCCCCCHHHHHHHH-cCCCEEEEeCCCCCHHHHHHHHHh
Confidence 58988421 1 12221223455444444 334544443333345555555544
No 180
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=67.39 E-value=70 Score=28.64 Aligned_cols=191 Identities=13% Similarity=0.123 Sum_probs=98.8
Q ss_pred ChHHHHHHHHHHHHhhcccccc-ccccccHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCC
Q 021144 53 SPHLVRKVHLDYLDAGANIIIT-ASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (317)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~T-nTy~as~~~l~~~g~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (317)
+.+.+++.-+.++++|++-|.. -|-+=. .-++.+|-.++++.+++.+. +
T Consensus 21 D~~~l~~lv~~li~~Gv~gl~v~GttGE~------~~Lt~~Er~~v~~~~~~~~~------------------------g 70 (292)
T 3daq_A 21 NLEALKAHVNFLLENNAQAIIVNGTTAES------PTLTTDEKELILKTVIDLVD------------------------K 70 (292)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSGGGTG------GGSCHHHHHHHHHHHHHHHT------------------------T
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcccccc------ccCCHHHHHHHHHHHHHHhC------------------------C
Confidence 4567888888889999985543 332211 12455666777777666441 2
Q ss_pred CCeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEecc----CCCHHHHHHHHHHHHHhC
Q 021144 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFET----IPNKLEAKAYAELLEEEG 207 (317)
Q Consensus 132 ~~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~ET----~p~~~Ea~a~~~~~~~~~ 207 (317)
+-+.|+| +|. .+.++..+ +++...+.|+|.+++=+ -|+.+++..-.+.+.+..
T Consensus 71 rvpviaG-vg~------------------~~t~~ai~----la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~ 127 (292)
T 3daq_A 71 RVPVIAG-TGT------------------NDTEKSIQ----ASIQAKALGADAIMLITPYYNKTNQRGLVKHFEAIADAV 127 (292)
T ss_dssp SSCEEEE-CCC------------------SCHHHHHH----HHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHH
T ss_pred CCcEEEe-CCc------------------ccHHHHHH----HHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhC
Confidence 3346676 332 14444443 45556667999998754 246667666665555432
Q ss_pred CCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCC--ChhhhHHHHHHHHhhCCC-cEEEEeCCC-Cccc-
Q 021144 208 ITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCT--SPRFIHGLILSVRKVTSK-PVIIYPNSG-ETYN- 282 (317)
Q Consensus 208 ~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~--~p~~~~~~l~~l~~~~~~-pl~vyPNaG-~~~d- 282 (317)
++|+++= .+ .+++.-.-+++...+.++ .++ .+||--+ ....+..+ .+..+. .+.+|.=.. ...+
T Consensus 128 -~lPiilY-n~--P~~tg~~l~~~~~~~La~-~pn--ivgiK~ssgd~~~~~~~----~~~~~~~~f~v~~G~d~~~~~~ 196 (292)
T 3daq_A 128 -KLPVVLY-NV--PSRTNMTIEPETVEILSQ-HPY--IVALKDATNDFEYLEEV----KKRIDTNSFALYSGNDDNVVEY 196 (292)
T ss_dssp -CSCEEEE-EC--HHHHSCCCCHHHHHHHHT-STT--EEEEEECCCCHHHHHHH----HTTSCTTTSEEEESCGGGHHHH
T ss_pred -CCCEEEE-ec--ccccCCCCCHHHHHHHhc-CCC--EEEEEeCCCCHHHHHHH----HHHCCCCCEEEEECCHHHHHHH
Confidence 5999842 11 122222334554444443 444 5566544 33333333 333332 344443221 1111
Q ss_pred --cccccccc-cCCCChhhHHHHHHHHH
Q 021144 283 --AELKKWVV-SFSLHFFPLELILNPFA 307 (317)
Q Consensus 283 --~~~~~w~~-~~~~~~~~~~~~~~~w~ 307 (317)
.....|.. ....-|+.+.+....|.
T Consensus 197 l~~G~~G~is~~~n~~P~~~~~l~~a~~ 224 (292)
T 3daq_A 197 YQRGGQGVISVIANVIPKEFQALYDAQQ 224 (292)
T ss_dssp HHTTCCEEEESGGGTCHHHHHHHHHHHH
T ss_pred HhcCCCEEEeCHHHhhHHHHHHHHHHHH
Confidence 01122322 22456787777766664
No 181
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=67.03 E-value=53 Score=29.79 Aligned_cols=81 Identities=11% Similarity=-0.096 Sum_probs=44.9
Q ss_pred HHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCC--cHHHHHHHhhcCCC---ceEEE
Q 021144 173 RVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGD--SILECASIADSCEQ---VVAVG 247 (317)
Q Consensus 173 qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~--~l~~a~~~~~~~~~---~~aiG 247 (317)
.+..+.+.|+|.+-++.-.++.|++..+ ++.+ .-.++. .++.|+ .+.+.++.+-+..+ -..++
T Consensus 244 ~l~~l~~~g~d~~~~d~~~dl~~~~~~~--------~~~l--~Gn~dp--~~l~gt~e~i~~~v~~~l~~~g~~~g~I~~ 311 (338)
T 2eja_A 244 FIDLAVDYRADALSVDWSVDIPELFKIY--------DKGF--QGNLEP--AVLYASEEVIEEKTLGLLRRIPVKTRYVFN 311 (338)
T ss_dssp HHHHHTTSCCSEEECCTTSCHHHHHHHC--------CSEE--ECCBCG--GGGGSCHHHHHHHHHHHHTTCCCSSSEEBC
T ss_pred HHHHHHHcCCCEEEeCCCCCHHHHHHhC--------CeEE--EECCCH--HHhcCCHHHHHHHHHHHHHHhCCCCCeEEe
Confidence 3556788999999999877888876543 1222 222333 333443 23333333322212 24566
Q ss_pred EcCC-----ChhhhHHHHHHHHh
Q 021144 248 INCT-----SPRFIHGLILSVRK 265 (317)
Q Consensus 248 vNC~-----~p~~~~~~l~~l~~ 265 (317)
..|. .|+.+..+++..++
T Consensus 312 ~g~gi~~~~p~en~~a~v~~v~~ 334 (338)
T 2eja_A 312 LGHGLAPDMELEKVKYLVDLVKS 334 (338)
T ss_dssp BSSCCCTTSCHHHHHHHHHHHHT
T ss_pred CCCCCCCCCCHHHHHHHHHHHHH
Confidence 6674 34677777766655
No 182
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=67.02 E-value=14 Score=31.85 Aligned_cols=98 Identities=16% Similarity=0.167 Sum_probs=54.0
Q ss_pred HHHHHHhCCCCEEEecc--CCCHHHHHHHHHHHHHhCCCccEEEEEEEc----C-CCcccCC----CcHHHHHHHhhcCC
Q 021144 173 RVLILANSGADLIAFET--IPNKLEAKAYAELLEEEGITIPAWFSFNSK----D-GINVVSG----DSILECASIADSCE 241 (317)
Q Consensus 173 qi~~l~~~gvD~l~~ET--~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~----~-~~~l~~G----~~l~~a~~~~~~~~ 241 (317)
+++.+.+.|+|.+.+-+ +++...+ .+++++.+ ..+.+++.+. + .-.+..+ .++.+.++.+.+ .
T Consensus 88 ~~~~~l~~Gad~V~lg~~~l~~p~~~---~~~~~~~g--~~~~~~ld~~~~~~~~~v~~~g~~~~~~~~~e~~~~~~~-~ 161 (244)
T 2y88_A 88 SLAAALATGCARVNVGTAALENPQWC---ARVIGEHG--DQVAVGLDVQIIDGEHRLRGRGWETDGGDLWDVLERLDS-E 161 (244)
T ss_dssp HHHHHHHTTCSEEEECHHHHHCHHHH---HHHHHHHG--GGEEEEEEEEEETTEEEEEEGGGTEEEEEHHHHHHHHHH-T
T ss_pred HHHHHHHcCCCEEEECchHhhChHHH---HHHHHHcC--CCEEEEEeccccCCCCEEEECCccCCCCCHHHHHHHHHh-C
Confidence 46667778999998754 3444333 33444443 3355555553 1 1112211 144555555554 4
Q ss_pred CceEEEEcCCCh-----hhhHHHHHHHHhhCCCcEEEEeCCC
Q 021144 242 QVVAVGINCTSP-----RFIHGLILSVRKVTSKPVIIYPNSG 278 (317)
Q Consensus 242 ~~~aiGvNC~~p-----~~~~~~l~~l~~~~~~pl~vyPNaG 278 (317)
+++.|.++...+ ..-...++++++..+.|++ .|+|
T Consensus 162 G~~~i~~~~~~~~~~~~g~~~~~~~~l~~~~~ipvi--a~GG 201 (244)
T 2y88_A 162 GCSRFVVTDITKDGTLGGPNLDLLAGVADRTDAPVI--ASGG 201 (244)
T ss_dssp TCCCEEEEETTTTTTTSCCCHHHHHHHHTTCSSCEE--EESC
T ss_pred CCCEEEEEecCCccccCCCCHHHHHHHHHhCCCCEE--EECC
Confidence 677777766432 1234677778777777865 4565
No 183
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A
Probab=66.58 E-value=82 Score=29.19 Aligned_cols=225 Identities=11% Similarity=0.057 Sum_probs=133.6
Q ss_pred HHHHHHHHHHHHhhccccccccccccHHH-HHhC-CCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCC
Q 021144 55 HLVRKVHLDYLDAGANIIITASYQATIQG-FEAK-GFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSR 132 (317)
Q Consensus 55 e~V~~iH~~Yl~AGAdiI~TnTy~as~~~-l~~~-g~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~~~~~~~~~ 132 (317)
+.+.+.-++-++.|-.-|.. |+..+.. .++. |-+...-.-++.+|++..|++. .
T Consensus 69 d~l~~~~~~~~~lGi~~v~L--Fgv~~~~~~KD~~gs~A~~~~g~v~rair~iK~~~----------------------p 124 (342)
T 1h7n_A 69 NRLKDYLKPLVAKGLRSVIL--FGVPLIPGTKDPVGTAADDPAGPVIQGIKFIREYF----------------------P 124 (342)
T ss_dssp HHHHHHHHHHHHTTCCEEEE--EEECCSTTCCBTTCGGGGCTTSHHHHHHHHHHHHC----------------------T
T ss_pred HHHHHHHHHHHHCCCCEEEE--ecccCccCCCCccccccCCCCChHHHHHHHHHHHC----------------------C
Confidence 66777778888999775443 3332210 0111 1100011247888888777543 1
Q ss_pred CeEEEEe--eCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCC--
Q 021144 133 PVLVAAS--VGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGI-- 208 (317)
Q Consensus 133 ~~~Vags--iGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~-- 208 (317)
+.+|..+ +-||-..-++|--... ..+.-++-.+...+|+-..+++|+|+++==-|-+- .+.+|.+++.+.+-
T Consensus 125 dl~VitDvcLc~YT~HGHcGil~~~---g~V~ND~Tl~~Lak~Als~A~AGAdiVAPSdMMDG-rV~aIR~aLd~~G~~~ 200 (342)
T 1h7n_A 125 ELYIICDVCLCEYTSHGHCGVLYDD---GTINRERSVSRLAAVAVNYAKAGAHCVAPSDMIDG-RIRDIKRGLINANLAH 200 (342)
T ss_dssp TSEEEEEECSTTTBTTCCSSCBCTT---SSBCHHHHHHHHHHHHHHHHHHTCSEEEECCCCTT-HHHHHHHHHHHTTCTT
T ss_pred CeEEEEeeecccccCCCceeEECCC---CcCccHHHHHHHHHHHHHHHHcCCCeeeccccccc-HHHHHHHHHHHCCCcc
Confidence 3555554 4566554444322111 12677888888888999999999999997777765 46788888988764
Q ss_pred CccEEEEEEEcCC---------------------CcccCCCcHHHHHHHhh--cCCCceEEEEcCCChhhhHHHHHHHHh
Q 021144 209 TIPAWFSFNSKDG---------------------INVVSGDSILECASIAD--SCEQVVAVGINCTSPRFIHGLILSVRK 265 (317)
Q Consensus 209 ~~pv~iSf~~~~~---------------------~~l~~G~~l~~a~~~~~--~~~~~~aiGvNC~~p~~~~~~l~~l~~ 265 (317)
++|+ +|.+.+=. ..-.|--.-.++++.+. -..|.+.|.|-=.-| -+.+++.+++
T Consensus 201 ~v~I-msYsaKyASafYGPFRdAa~Sap~~GDRktYQmdpaN~~EAlre~~~Di~EGAD~vMVKPal~--YLDIi~~vk~ 277 (342)
T 1h7n_A 201 KTFV-LSYAAKFSGNLYGPFRDAACSAPSNGDRKCYQLPPAGRGLARRALERDMSEGADGIIVKPSTF--YLDIMRDASE 277 (342)
T ss_dssp TCEE-EEEEEEBCSSCCHHHHHHHTCCCSSSCSTTTSBCTTCHHHHHHHHHHHHHTTCSEEEEESSGG--GHHHHHHHHH
T ss_pred CceE-eechHHHhHHhhHHHHHHHhcCCCCCCccccCCCCCCHHHHHHHHHhhHHhCCCeEEEecCcc--HHHHHHHHHH
Confidence 3444 47765311 01112222334544432 225889999876543 3567888888
Q ss_pred hC-CCcEEEEeCCCCc---cccccccccccCCCChhhHHHHHHHHHHcccccc
Q 021144 266 VT-SKPVIIYPNSGET---YNAELKKWVVSFSLHFFPLELILNPFASCRLISF 314 (317)
Q Consensus 266 ~~-~~pl~vyPNaG~~---~d~~~~~w~~~~~~~~~~~~~~~~~w~~~~~~~~ 314 (317)
.+ +.|+.+|-=+||- .-...+.|... ...+.+....+.++|.=-|
T Consensus 278 ~~p~~P~aaYqVSGEYAMikaAa~~GwiD~----~~~v~Esl~~~kRAGAd~I 326 (342)
T 1h7n_A 278 ICKDLPICAYHVSGEYAMLHAAAEKGVVDL----KTIAFESHQGFLRAGARLI 326 (342)
T ss_dssp HTTTSCEEEEECHHHHHHHHHHHHTTSSCH----HHHHHHHHHHHHHTTCSEE
T ss_pred hccCCCeEEEEcCcHHHHHHHHHHcCCccH----HHHHHHHHHHHHhcCCCEE
Confidence 88 8999999999962 22334567521 2345566666666665333
No 184
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=66.46 E-value=5.3 Score=36.02 Aligned_cols=45 Identities=29% Similarity=0.304 Sum_probs=31.1
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEE
Q 021144 162 SLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAW 213 (317)
Q Consensus 162 s~~el~~~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~ 213 (317)
+.+++ +.-.++++++.++|+|.|++|-+|. ++++.+.+ +. ++|++
T Consensus 156 t~~~a-~~~i~rA~a~~eAGA~~ivlE~vp~-~~a~~it~---~l--~iP~i 200 (264)
T 1m3u_A 156 GDEAG-DQLLSDALALEAAGAQLLVLECVPV-ELAKRITE---AL--AIPVI 200 (264)
T ss_dssp SHHHH-HHHHHHHHHHHHHTCCEEEEESCCH-HHHHHHHH---HC--SSCEE
T ss_pred CHHHH-HHHHHHHHHHHHCCCcEEEEecCCH-HHHHHHHH---hC--CCCEE
Confidence 43444 4555689999999999999999994 45554443 32 37865
No 185
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=66.28 E-value=74 Score=28.51 Aligned_cols=154 Identities=12% Similarity=-0.004 Sum_probs=83.6
Q ss_pred ChHHHHHHHHHHHHhhcccccc-ccccccHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCC
Q 021144 53 SPHLVRKVHLDYLDAGANIIIT-ASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (317)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~T-nTy~as~~~l~~~g~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (317)
+.+.+++.-+.++++|.+-|.. -|-+=. .-++.+|-.++++.+++.+. +
T Consensus 22 D~~~l~~lv~~li~~Gv~gl~~~GttGE~------~~Ls~~Er~~v~~~~~~~~~------------------------g 71 (294)
T 3b4u_A 22 DIDAMIAHARRCLSNGCDSVTLFGTTGEG------CSVGSRERQAILSSFIAAGI------------------------A 71 (294)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSTTTTG------GGSCHHHHHHHHHHHHHTTC------------------------C
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCh------hhCCHHHHHHHHHHHHHHhC------------------------C
Confidence 4567888888889999995543 332211 12455666677766665431 2
Q ss_pred CCeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEeccC-----CCHHHHHHHHHHHHHh
Q 021144 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI-----PNKLEAKAYAELLEEE 206 (317)
Q Consensus 132 ~~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~ET~-----p~~~Ea~a~~~~~~~~ 206 (317)
+-..|+| +|.. +.++..+ +++...+.|+|.+++=+= |+-+++..-.+.+.+.
T Consensus 72 r~pviaG-vg~~------------------~t~~ai~----la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a 128 (294)
T 3b4u_A 72 PSRIVTG-VLVD------------------SIEDAAD----QSAEALNAGARNILLAPPSYFKNVSDDGLFAWFSAVFSK 128 (294)
T ss_dssp GGGEEEE-ECCS------------------SHHHHHH----HHHHHHHTTCSEEEECCCCSSCSCCHHHHHHHHHHHHHH
T ss_pred CCcEEEe-CCCc------------------cHHHHHH----HHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHh
Confidence 2346666 3331 3344433 566677789999987642 5667766666555443
Q ss_pred CC--CccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCC-ceEEEEcCCChhhhHHHHHH
Q 021144 207 GI--TIPAWFSFNSKDGINVVSGDSILECASIADSCEQ-VVAVGINCTSPRFIHGLILS 262 (317)
Q Consensus 207 ~~--~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~-~~aiGvNC~~p~~~~~~l~~ 262 (317)
.+ ++|+++== + .+++.-.-+.+...+.+++.++ +.+|=--|.....+..+++.
T Consensus 129 ~p~~~lPiilYn-~--P~~tg~~l~~~~~~~La~~~pn~ivgiKds~gd~~~~~~~~~~ 184 (294)
T 3b4u_A 129 IGKDARDILVYN-I--PSVTMVTLSVELVGRLKAAFPGIVTGVKDSSGNWSHTERLLKE 184 (294)
T ss_dssp HCTTCCCEEEEE-C--HHHHSCCCCHHHHHHHHHHCTTTEEEEEECCCCHHHHHHHHHH
T ss_pred cCCCCCcEEEEE-C--cchhCcCCCHHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHh
Confidence 21 48988421 1 1222122345545554423344 44444334445555555543
No 186
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=65.87 E-value=31 Score=31.41 Aligned_cols=119 Identities=15% Similarity=0.158 Sum_probs=61.3
Q ss_pred CeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEeccC---------CCHHHHHHHH---
Q 021144 133 PVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI---------PNKLEAKAYA--- 200 (317)
Q Consensus 133 ~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~ET~---------p~~~Ea~a~~--- 200 (317)
+++|.|=+=-+.+...||..| .+.+++. ++++.+++.|+|+|=+-.- +.-+|++-++
T Consensus 39 ~~~iMgilNvTPDSFsdgg~~-------~~~~~a~----~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI 107 (297)
T 1tx2_A 39 KTLIMGILNVTPDSFSDGGSY-------NEVDAAV----RHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMI 107 (297)
T ss_dssp SCEEEEECCCCCCTTCSSCBH-------HHHHHHH----HHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCCCccccCCcc-------CCHHHHH----HHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHH
Confidence 467777776666655554332 1233333 3667777899999965532 2267776666
Q ss_pred HHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCCChh-hhHHHHHHHHhhCCCcEEEEeCCCC
Q 021144 201 ELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPR-FIHGLILSVRKVTSKPVIIYPNSGE 279 (317)
Q Consensus 201 ~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~~p~-~~~~~l~~l~~~~~~pl~vyPNaG~ 279 (317)
+.+++.. ++|+ |+ |....+-+-+.++. +... ||-.+.. ....+++.+++ .+.|+++.++.|.
T Consensus 108 ~~l~~~~-~vpi--SI---------DT~~~~V~~aAl~a--Ga~i--INdvsg~~~d~~m~~~aa~-~g~~vVlmh~~G~ 170 (297)
T 1tx2_A 108 QAVSKEV-KLPI--SI---------DTYKAEVAKQAIEA--GAHI--INDIWGAKAEPKIAEVAAH-YDVPIILMHNRDN 170 (297)
T ss_dssp HHHHHHS-CSCE--EE---------ECSCHHHHHHHHHH--TCCE--EEETTTTSSCTHHHHHHHH-HTCCEEEECCCSC
T ss_pred HHHHhcC-CceE--EE---------eCCCHHHHHHHHHc--CCCE--EEECCCCCCCHHHHHHHHH-hCCcEEEEeCCCC
Confidence 4455432 3554 44 22223222222332 3332 3554221 12233333333 3688999998775
No 187
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=65.75 E-value=62 Score=32.32 Aligned_cols=114 Identities=13% Similarity=0.133 Sum_probs=68.9
Q ss_pred CCCHHHH---HHHHHHHHHHHHhCCCCEEEeccC----------C-----------C----HHHHHHHHHHHHH-hCCCc
Q 021144 160 AVSLETL---KEFHRRRVLILANSGADLIAFETI----------P-----------N----KLEAKAYAELLEE-EGITI 210 (317)
Q Consensus 160 ~~s~~el---~~~h~~qi~~l~~~gvD~l~~ET~----------p-----------~----~~Ea~a~~~~~~~-~~~~~ 210 (317)
.++.+|+ .+.|.+.++...++|.|.|=+--- | + .+-+..+++++++ .+.+.
T Consensus 130 ~~t~~ei~~~i~~~~~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~ 209 (671)
T 1ps9_A 130 ELSHEEILQLIDNFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDF 209 (671)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCc
Confidence 4676665 456777777778899999844210 1 1 1224455566665 35578
Q ss_pred cEEEEEEEcCCCcccCCCcHHHHHHH---hhcCCCceEEEEc-----CCCh--------hhhHHHHHHHHhhCCCcEEEE
Q 021144 211 PAWFSFNSKDGINVVSGDSILECASI---ADSCEQVVAVGIN-----CTSP--------RFIHGLILSVRKVTSKPVIIY 274 (317)
Q Consensus 211 pv~iSf~~~~~~~l~~G~~l~~a~~~---~~~~~~~~aiGvN-----C~~p--------~~~~~~l~~l~~~~~~pl~vy 274 (317)
|+++-++..+. ...|.+++++++. +.+ .+++.|.+- ...| ......++.+++..+.|+++
T Consensus 210 ~v~vrls~~~~--~~~g~~~~~~~~~a~~l~~-~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~iPvi~- 285 (671)
T 1ps9_A 210 IIIYRLSMLDL--VEDGGTFAETVELAQAIEA-AGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVSLPLVT- 285 (671)
T ss_dssp EEEEEEEEECC--STTCCCHHHHHHHHHHHHH-HTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSCSSCEEE-
T ss_pred eEEEEECcccc--CCCCCCHHHHHHHHHHHHh-cCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhcCceEEE-
Confidence 99888887543 2357777765544 333 467777652 1101 22356778888888889765
Q ss_pred eCCC
Q 021144 275 PNSG 278 (317)
Q Consensus 275 PNaG 278 (317)
|.|
T Consensus 286 -~Gg 288 (671)
T 1ps9_A 286 -TNR 288 (671)
T ss_dssp -CSS
T ss_pred -eCC
Confidence 544
No 188
>3u43_A Colicin-E2 immunity protein; protein-protein complex, DNAse, high affinity, protein bindi; 1.72A {Escherichia coli} PDB: 2no8_A 2wpt_A
Probab=65.66 E-value=4.1 Score=30.97 Aligned_cols=50 Identities=12% Similarity=0.137 Sum_probs=35.5
Q ss_pred CChhhhHHHHHHHHhhCCCc----EEEEeCCCCccccccccccccCCCChhhHHHHHHHHH-Hccccc
Q 021144 251 TSPRFIHGLILSVRKVTSKP----VIIYPNSGETYNAELKKWVVSFSLHFFPLELILNPFA-SCRLIS 313 (317)
Q Consensus 251 ~~p~~~~~~l~~l~~~~~~p----l~vyPNaG~~~d~~~~~w~~~~~~~~~~~~~~~~~w~-~~~~~~ 313 (317)
..-+....+|..+.+.+.-| ||.||+.|. +.+|+.....+++|. ++|.=.
T Consensus 28 ~~E~e~d~ll~~fe~iteHP~gSDLIfyP~~~~-------------e~SPEgIv~~IKeWRa~nG~pg 82 (94)
T 3u43_A 28 ATEEDDNKLVREFERLTEHPDGSDLIYYPRDDR-------------EDSPEGIVKEIKEWRAANGKSG 82 (94)
T ss_dssp SSHHHHHHHHHHHHHHHCCTTTTHHHHSCCTTS-------------CSSHHHHHHHHHHHHHHTTCCC
T ss_pred CCHHHHHHHHHHHHHhCCCCCccCeeeeCCCCC-------------CCCHHHHHHHHHHHHHHcCCcc
Confidence 34466777888777766544 778887752 368999999999997 455433
No 189
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=65.57 E-value=12 Score=34.13 Aligned_cols=59 Identities=17% Similarity=0.218 Sum_probs=40.0
Q ss_pred HhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEc
Q 021144 178 ANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGIN 249 (317)
Q Consensus 178 ~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvN 249 (317)
.++|+|+|.+-|+. +++++.+++.++...++.|+.+|- |-+++.+.+.+. .++++||+-
T Consensus 214 ~~aGaD~I~ld~~~-~~~l~~~v~~l~~~~~~~~I~ASG----------GIt~~ni~~~~~--aGaD~i~vG 272 (299)
T 2jbm_A 214 AEAGADLVLLDNFK-PEELHPTATVLKAQFPSVAVEASG----------GITLDNLPQFCG--PHIDVISMG 272 (299)
T ss_dssp HHTTCSEEEEESCC-HHHHHHHHHHHHHHCTTSEEEEES----------SCCTTTHHHHCC--TTCCEEECT
T ss_pred HHcCCCEEEECCCC-HHHHHHHHHHhhccCCCeeEEEEC----------CCCHHHHHHHHH--CCCCEEEEC
Confidence 35799999999964 888888888777543457777654 334444444443 478888873
No 190
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=65.30 E-value=49 Score=30.02 Aligned_cols=88 Identities=11% Similarity=0.048 Sum_probs=47.1
Q ss_pred HHHhCCCCEEEec-cCC------CHHHHHHHHHHHHHhCCCccEEEEEEEcCCCccc-CCCcHHHHHHHhhcCCCceEEE
Q 021144 176 ILANSGADLIAFE-TIP------NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVV-SGDSILECASIADSCEQVVAVG 247 (317)
Q Consensus 176 ~l~~~gvD~l~~E-T~p------~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~-~G~~l~~a~~~~~~~~~~~aiG 247 (317)
..++.|+|.+.+= .+- .++|+..+++.+++.+ +|+++- +.. +.++. +...+..+++...+ .+++.|.
T Consensus 133 ~Av~~GAdaV~~~i~~Gs~~~~~~l~~i~~v~~~a~~~G--lpvIie-~~~-G~~~~~d~e~i~~aariA~e-lGAD~VK 207 (295)
T 3glc_A 133 DAVRLNSCAVAAQVYIGSEYEHQSIKNIIQLVDAGMKVG--MPTMAV-TGV-GKDMVRDQRYFSLATRIAAE-MGAQIIK 207 (295)
T ss_dssp HHHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHTTT--CCEEEE-ECC-----CCSHHHHHHHHHHHHH-TTCSEEE
T ss_pred HHHHCCCCEEEEEEECCCCcHHHHHHHHHHHHHHHHHcC--CEEEEE-CCC-CCccCCCHHHHHHHHHHHHH-hCCCEEE
Confidence 3445788877542 111 2444556666666544 898874 332 22221 21223345554444 5899999
Q ss_pred EcCCChhhhHHHHHHHHhhCCCcEEE
Q 021144 248 INCTSPRFIHGLILSVRKVTSKPVII 273 (317)
Q Consensus 248 vNC~~p~~~~~~l~~l~~~~~~pl~v 273 (317)
++-+ ++. ++++....+.|+++
T Consensus 208 t~~t-~e~----~~~vv~~~~vPVv~ 228 (295)
T 3glc_A 208 TYYV-EKG----FERIVAGCPVPIVI 228 (295)
T ss_dssp EECC-TTT----HHHHHHTCSSCEEE
T ss_pred eCCC-HHH----HHHHHHhCCCcEEE
Confidence 9965 333 45555555788764
No 191
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=64.64 E-value=39 Score=31.36 Aligned_cols=114 Identities=13% Similarity=0.109 Sum_probs=67.9
Q ss_pred CCCHHH---HHHHHHHHHHHHHhCCCCEEEeccC----------C-----------CHH-H---HHHHHHHHHHh-CCCc
Q 021144 160 AVSLET---LKEFHRRRVLILANSGADLIAFETI----------P-----------NKL-E---AKAYAELLEEE-GITI 210 (317)
Q Consensus 160 ~~s~~e---l~~~h~~qi~~l~~~gvD~l~~ET~----------p-----------~~~-E---a~a~~~~~~~~-~~~~ 210 (317)
+++.+| +.+.|.+.++...++|.|.|=+=-- | +++ . +..+++++++. +.+.
T Consensus 147 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~ 226 (363)
T 3l5l_A 147 EMTLDDIARVKQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENL 226 (363)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCc
Confidence 477666 4556777777778899998844311 1 121 2 34456666654 4467
Q ss_pred cEEEEEEEcCCCcccCC-CcHHHHH---HHhhcCCCceEEEEcCC----------ChhhhHHHHHHHHhhCCCcEEEEeC
Q 021144 211 PAWFSFNSKDGINVVSG-DSILECA---SIADSCEQVVAVGINCT----------SPRFIHGLILSVRKVTSKPVIIYPN 276 (317)
Q Consensus 211 pv~iSf~~~~~~~l~~G-~~l~~a~---~~~~~~~~~~aiGvNC~----------~p~~~~~~l~~l~~~~~~pl~vyPN 276 (317)
|+.+-++..+- ...| .++++++ +.+.+ .+++.|-+-.. .|..-..+++.+++..+.|+++ |
T Consensus 227 pV~vRis~~~~--~~~G~~~~~~~~~la~~L~~-~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~--~ 301 (363)
T 3l5l_A 227 PLTARFGVLEY--DGRDEQTLEESIELARRFKA-GGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREAKLPVTS--A 301 (363)
T ss_dssp CEEEEEEEECS--SSCHHHHHHHHHHHHHHHHH-TTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCCEEE--C
T ss_pred eEEEEecchhc--CCCCCCCHHHHHHHHHHHHH-cCCCEEEEecCccccccccCCCcchhHHHHHHHHHHcCCcEEE--e
Confidence 99998887532 2234 4555544 44444 47787766542 1333456778888877888764 4
Q ss_pred CC
Q 021144 277 SG 278 (317)
Q Consensus 277 aG 278 (317)
.|
T Consensus 302 Gg 303 (363)
T 3l5l_A 302 WG 303 (363)
T ss_dssp SS
T ss_pred CC
Confidence 44
No 192
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=64.54 E-value=60 Score=29.85 Aligned_cols=96 Identities=13% Similarity=-0.066 Sum_probs=53.9
Q ss_pred HHHHHHhCCCCEEEeccC--------------CCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhh
Q 021144 173 RVLILANSGADLIAFETI--------------PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIAD 238 (317)
Q Consensus 173 qi~~l~~~gvD~l~~ET~--------------p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~ 238 (317)
-++.|.++||+.+-+|-- -...|...-++++++.....++.|.-..+. ... ..++++++.+.
T Consensus 121 tv~~l~~aGaagv~iED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~~~~~I~ARtda--~a~--~gl~~ai~Ra~ 196 (318)
T 1zlp_A 121 FIRELISAGAKGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIGDSDFFLVARTDA--RAP--HGLEEGIRRAN 196 (318)
T ss_dssp HHHHHHHTTCCEEEEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHHHTTSCCEEEEEECT--HHH--HHHHHHHHHHH
T ss_pred HHHHHHHcCCcEEEECCCCCCccccCCCCCccCCHHHHHHHHHHHHHhcccCCcEEEEeeHH--hhh--cCHHHHHHHHH
Confidence 356677899999999954 344566544555544322244555443322 111 12455554432
Q ss_pred c--CCCceEEEEcCCC-hhhhHHHHHHHHhhCCCcEEEEeC
Q 021144 239 S--CEQVVAVGINCTS-PRFIHGLILSVRKVTSKPVIIYPN 276 (317)
Q Consensus 239 ~--~~~~~aiGvNC~~-p~~~~~~l~~l~~~~~~pl~vyPN 276 (317)
. ..|+++|=+-|.. ++.+ +.+.+..+.|+++.+-
T Consensus 197 Ay~eAGAd~i~~e~~~~~e~~----~~i~~~l~~P~lan~~ 233 (318)
T 1zlp_A 197 LYKEAGADATFVEAPANVDEL----KEVSAKTKGLRIANMI 233 (318)
T ss_dssp HHHHTTCSEEEECCCCSHHHH----HHHHHHSCSEEEEEEC
T ss_pred HHHHcCCCEEEEcCCCCHHHH----HHHHHhcCCCEEEEec
Confidence 1 2588999999973 3444 4444445689876543
No 193
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=64.48 E-value=78 Score=30.86 Aligned_cols=66 Identities=9% Similarity=0.050 Sum_probs=42.7
Q ss_pred HHHHHHHHhCCCCEEEeccC-CCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEE
Q 021144 171 RRRVLILANSGADLIAFETI-PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGI 248 (317)
Q Consensus 171 ~~qi~~l~~~gvD~l~~ET~-p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGv 248 (317)
.++++.|.++|+|+|.+-+- ++...+...++.+++..+++|+++.- + .+.+++...++ .++++|-+
T Consensus 258 ~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~g~-v---------~t~e~a~~~~~--aGad~i~v 324 (511)
T 3usb_A 258 MTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGN-V---------ATAEATKALIE--AGANVVKV 324 (511)
T ss_dssp HHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTSEEEEEE-E---------CSHHHHHHHHH--HTCSEEEE
T ss_pred HHHHHHHHhhccceEEecccccchhhhhhHHHHHHHhCCCceEEeee-e---------ccHHHHHHHHH--hCCCEEEE
Confidence 45788899999999998643 34555556677777665457888532 1 24555555554 36777755
No 194
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=64.05 E-value=2.7 Score=36.77 Aligned_cols=98 Identities=16% Similarity=0.152 Sum_probs=17.4
Q ss_pred HHHHHhCCCCEEEeccC--CCHHHHHHHHHHHHHhCCCccEEEEEEEcCC---C--cc-----cCCCcHHHHHHHhhcCC
Q 021144 174 VLILANSGADLIAFETI--PNKLEAKAYAELLEEEGITIPAWFSFNSKDG---I--NV-----VSGDSILECASIADSCE 241 (317)
Q Consensus 174 i~~l~~~gvD~l~~ET~--p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~---~--~l-----~~G~~l~~a~~~~~~~~ 241 (317)
++.+.+.|+|.+.+-|- .+... +.++.+..+ .-.+++++.++.. + .+ .++.+..+.++.+.. .
T Consensus 94 ~~~~l~~Gad~V~ig~~~l~dp~~---~~~~~~~~g-~~~iv~~ld~~~~~~~~~v~~~g~~~~~~~~~~~~a~~~~~-~ 168 (247)
T 3tdn_A 94 FLEAFLRGADKVSINTAAVENPSL---ITQIAQTFG-SQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEK-R 168 (247)
T ss_dssp HHHHHHTTCSEECCSHHHHHCTHH---HHHHHHHHC--------------------------------------------
T ss_pred HHHHHHcCCCeeehhhHHhhChHH---HHHHHHHhC-CCcEEEEEEeccCCCCEEEEECCCcccCCCCHHHHHHHHHh-c
Confidence 44455689999998763 23222 333444443 2345556665431 1 11 123344455555544 4
Q ss_pred CceEEEEcCCChhh-----hHHHHHHHHhhCCCcEEEEeCCC
Q 021144 242 QVVAVGINCTSPRF-----IHGLILSVRKVTSKPVIIYPNSG 278 (317)
Q Consensus 242 ~~~aiGvNC~~p~~-----~~~~l~~l~~~~~~pl~vyPNaG 278 (317)
++..|.++....+. -..+++++++..+.|++ .++|
T Consensus 169 G~~~i~~t~~~~~g~~~g~~~~~~~~i~~~~~iPvi--a~GG 208 (247)
T 3tdn_A 169 GAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPII--ASGG 208 (247)
T ss_dssp ------------------------------------------
T ss_pred CCCEEEEecccCCCCcCCCCHHHHHHHHHhCCCCEE--EECC
Confidence 67777777653221 12466777776677764 4444
No 195
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=63.69 E-value=78 Score=29.18 Aligned_cols=84 Identities=15% Similarity=0.238 Sum_probs=51.2
Q ss_pred HHHHHHHHhCCCCEEEec-cCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEc
Q 021144 171 RRRVLILANSGADLIAFE-TIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGIN 249 (317)
Q Consensus 171 ~~qi~~l~~~gvD~l~~E-T~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvN 249 (317)
.++++.+.+.|+|++.+= ..|.. .+++.+++.+ +|+|+++ .+++++....+ .++++|.+.
T Consensus 112 ~~~~~~~~~~g~~~V~~~~g~~~~----~~i~~~~~~g--~~v~~~v-----------~t~~~a~~a~~--~GaD~i~v~ 172 (369)
T 3bw2_A 112 DAKLAVLLDDPVPVVSFHFGVPDR----EVIARLRRAG--TLTLVTA-----------TTPEEARAVEA--AGADAVIAQ 172 (369)
T ss_dssp HHHHHHHHHSCCSEEEEESSCCCH----HHHHHHHHTT--CEEEEEE-----------SSHHHHHHHHH--TTCSEEEEE
T ss_pred HHHHHHHHhcCCCEEEEeCCCCcH----HHHHHHHHCC--CeEEEEC-----------CCHHHHHHHHH--cCCCEEEEe
Confidence 557788888999988762 22332 3344455544 8888865 24566554443 478888883
Q ss_pred CC------C---h--------hhhHHHHHHHHhhCCCcEEE
Q 021144 250 CT------S---P--------RFIHGLILSVRKVTSKPVII 273 (317)
Q Consensus 250 C~------~---p--------~~~~~~l~~l~~~~~~pl~v 273 (317)
.. + + .....+++++++..+.|+++
T Consensus 173 g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~~iPVia 213 (369)
T 3bw2_A 173 GVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREAVDIPVVA 213 (369)
T ss_dssp CTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHHCSSCEEE
T ss_pred CCCcCCcCCCcccccccccccccHHHHHHHHHHhcCceEEE
Confidence 31 1 0 12256777887777788654
No 196
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=63.36 E-value=85 Score=28.20 Aligned_cols=151 Identities=13% Similarity=0.111 Sum_probs=84.7
Q ss_pred ChHHHHHHHHHHHHhhcccccc-ccccccHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCC
Q 021144 53 SPHLVRKVHLDYLDAGANIIIT-ASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (317)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~T-nTy~as~~~l~~~g~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (317)
+.+.+++.-+.++++|.+-|.. -|-+=. .-++.+|-.++++.+++.+. +
T Consensus 26 D~~~l~~lv~~li~~Gv~gl~v~GttGE~------~~Ls~~Er~~v~~~~~~~~~------------------------g 75 (301)
T 3m5v_A 26 DEQSYARLIKRQIENGIDAVVPVGTTGES------ATLTHEEHRTCIEIAVETCK------------------------G 75 (301)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECSSTTTTG------GGSCHHHHHHHHHHHHHHHT------------------------T
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCh------hhCCHHHHHHHHHHHHHHhC------------------------C
Confidence 4567888888889999995543 333211 12455666777776665442 2
Q ss_pred -CCeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEecc----CCCHHHHHHHHHHHHHh
Q 021144 132 -RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFET----IPNKLEAKAYAELLEEE 206 (317)
Q Consensus 132 -~~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~ET----~p~~~Ea~a~~~~~~~~ 206 (317)
+-+.|+| +|. .+.++..+ +++...+.|+|.+++=+ -|+-+++..-.+.+.+.
T Consensus 76 ~rvpviaG-vg~------------------~~t~~ai~----la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a 132 (301)
T 3m5v_A 76 TKVKVLAG-AGS------------------NATHEAVG----LAKFAKEHGADGILSVAPYYNKPTQQGLYEHYKAIAQS 132 (301)
T ss_dssp SSCEEEEE-CCC------------------SSHHHHHH----HHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHH
T ss_pred CCCeEEEe-CCC------------------CCHHHHHH----HHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHh
Confidence 2356666 332 14444443 45667778999998764 24667776666666554
Q ss_pred CCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCC--ChhhhHHHHHH
Q 021144 207 GITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCT--SPRFIHGLILS 262 (317)
Q Consensus 207 ~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~--~p~~~~~~l~~ 262 (317)
. ++|+++== + .+++--.-+++...+..+..++ .+||--+ ....+..+++.
T Consensus 133 ~-~lPiilYn-~--P~~tg~~l~~~~~~~La~~~pn--ivgiKdssgd~~~~~~~~~~ 184 (301)
T 3m5v_A 133 V-DIPVLLYN-V--PGRTGCEISTDTIIKLFRDCEN--IYGVKEASGNIDKCVDLLAH 184 (301)
T ss_dssp C-SSCEEEEE-C--HHHHSCCCCHHHHHHHHHHCTT--EEEEEECSSCHHHHHHHHHH
T ss_pred C-CCCEEEEe-C--chhhCcCCCHHHHHHHHhcCCC--EEEEEeCCCCHHHHHHHHHh
Confidence 3 69998432 1 1222223345555544432245 4555544 44555555443
No 197
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=63.24 E-value=41 Score=31.10 Aligned_cols=111 Identities=11% Similarity=0.111 Sum_probs=67.1
Q ss_pred CCCHHH---HHHHHHHHHHHHHhCCCCEEEecc----------CC-----------CH-HH---HHHHHHHHHHh-CCCc
Q 021144 160 AVSLET---LKEFHRRRVLILANSGADLIAFET----------IP-----------NK-LE---AKAYAELLEEE-GITI 210 (317)
Q Consensus 160 ~~s~~e---l~~~h~~qi~~l~~~gvD~l~~ET----------~p-----------~~-~E---a~a~~~~~~~~-~~~~ 210 (317)
+++.+| +.+.|.+-++...++|.|.|=+=- -| ++ .. +..+++++++. +.+.
T Consensus 132 ~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~ 211 (343)
T 3kru_A 132 ELSVEEIKSIVKAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENK 211 (343)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTS
T ss_pred hcCHHHHHHHHHHHHHHHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccC
Confidence 467666 455777777777889999885441 11 11 12 34566667664 3467
Q ss_pred cEEEEEEEcCCCcccCCCcHHHHHHHhhc--CCCceEEEEcCC---------ChhhhHHHHHHHHhhCCCcEEE
Q 021144 211 PAWFSFNSKDGINVVSGDSILECASIADS--CEQVVAVGINCT---------SPRFIHGLILSVRKVTSKPVII 273 (317)
Q Consensus 211 pv~iSf~~~~~~~l~~G~~l~~a~~~~~~--~~~~~aiGvNC~---------~p~~~~~~l~~l~~~~~~pl~v 273 (317)
|+.+-++..+ ....|.++++++..+.. .. ++.|=+... .|..-...++.+++..+.|+++
T Consensus 212 pv~vRls~~~--~~~~g~~~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~ 282 (343)
T 3kru_A 212 PIFVRVSADD--YMEGGINIDMMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRCNIKTSA 282 (343)
T ss_dssp CEEEEEECCC--SSTTSCCHHHHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCEEEE
T ss_pred CeEEEeechh--hhccCccHHHHHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHhcCcccce
Confidence 9998887643 23357777776554432 24 777766321 1233456777888877888764
No 198
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=62.52 E-value=74 Score=29.52 Aligned_cols=115 Identities=15% Similarity=0.139 Sum_probs=66.7
Q ss_pred CCCHHHHH---HHHHHHHHHHHhCCCCEEEeccC----------C-----------CH----HHHHHHHHHHHHh-CCCc
Q 021144 160 AVSLETLK---EFHRRRVLILANSGADLIAFETI----------P-----------NK----LEAKAYAELLEEE-GITI 210 (317)
Q Consensus 160 ~~s~~el~---~~h~~qi~~l~~~gvD~l~~ET~----------p-----------~~----~Ea~a~~~~~~~~-~~~~ 210 (317)
+++.+|+. +.|.+.++.+.++|.|.|=+--- | ++ +-+..+++++++. +.+
T Consensus 150 ~mt~~eI~~~i~~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~- 228 (365)
T 2gou_A 150 AMTKADIAQVIADYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAE- 228 (365)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGG-
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCC-
Confidence 47777755 45666666677899999855210 1 11 1234556666654 334
Q ss_pred cEEEEEEEcCC-CcccCCCcHHHHH---HHhhcCCCceEEEEcCC----ChhhhHHHHHHHHhhCCCcEEEEeCCC
Q 021144 211 PAWFSFNSKDG-INVVSGDSILECA---SIADSCEQVVAVGINCT----SPRFIHGLILSVRKVTSKPVIIYPNSG 278 (317)
Q Consensus 211 pv~iSf~~~~~-~~l~~G~~l~~a~---~~~~~~~~~~aiGvNC~----~p~~~~~~l~~l~~~~~~pl~vyPNaG 278 (317)
||.+-++..+. ....+|.++++++ +.+.+ .+++.|-+-.. .|..-..+++.+++..+.|+++ |.|
T Consensus 229 pv~vris~~~~~~~~~~~~~~~~~~~~a~~l~~-~G~d~i~v~~~~~~~~~~~~~~~~~~i~~~~~iPvi~--~Gg 301 (365)
T 2gou_A 229 RVGVRLAPLTTLNGTVDADPILTYTAAAALLNK-HRIVYLHIAEVDWDDAPDTPVSFKRALREAYQGVLIY--AGR 301 (365)
T ss_dssp GEEEEECSSCCTTSCCCSSHHHHHHHHHHHHHH-TTCSEEEEECCBTTBCCCCCHHHHHHHHHHCCSEEEE--ESS
T ss_pred cEEEEEccccccCCCCCCCCHHHHHHHHHHHHH-cCCCEEEEeCCCcCCCCCccHHHHHHHHHHCCCcEEE--eCC
Confidence 88887765332 1133566766654 44444 57888877663 1221235677888888888654 444
No 199
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=62.17 E-value=52 Score=29.21 Aligned_cols=88 Identities=11% Similarity=0.141 Sum_probs=52.4
Q ss_pred HHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcC---
Q 021144 174 VLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINC--- 250 (317)
Q Consensus 174 i~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC--- 250 (317)
++.+.++|||.+++=.+| ++|.....+++++.+ +..+ .+.- .-++.+...+......+...+ +.-
T Consensus 109 ~~~~~~aGvdG~IipDLP-~eE~~~~~~~~~~~G--l~~I-~lva-------P~t~~eRi~~ia~~a~gFiY~-Vs~~Gv 176 (252)
T 3tha_A 109 VKKAKSLGICALIVPELS-FEESDDLIKECERYN--IALI-TLVS-------VTTPKERVKKLVKHAKGFIYL-LASIGI 176 (252)
T ss_dssp HHHHHHTTEEEEECTTCC-GGGCHHHHHHHHHTT--CEEC-EEEE-------TTSCHHHHHHHHTTCCSCEEE-ECCSCS
T ss_pred HHHHHHcCCCEEEeCCCC-HHHHHHHHHHHHHcC--CeEE-EEeC-------CCCcHHHHHHHHHhCCCeEEE-EecCCC
Confidence 445778999999999998 467888888888877 4332 2211 122233333333333343322 321
Q ss_pred CC-----hhhhHHHHHHHHhhCCCcEEE
Q 021144 251 TS-----PRFIHGLILSVRKVTSKPVII 273 (317)
Q Consensus 251 ~~-----p~~~~~~l~~l~~~~~~pl~v 273 (317)
|+ ++.+..+++.+++.++.|+++
T Consensus 177 TG~~~~~~~~~~~~v~~vr~~~~~Pv~v 204 (252)
T 3tha_A 177 TGTKSVEEAILQDKVKEIRSFTNLPIFV 204 (252)
T ss_dssp SSCSHHHHHHHHHHHHHHHTTCCSCEEE
T ss_pred CCcccCCCHHHHHHHHHHHHhcCCcEEE
Confidence 22 234567888888888888766
No 200
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=62.02 E-value=85 Score=27.78 Aligned_cols=44 Identities=14% Similarity=0.108 Sum_probs=33.8
Q ss_pred HHHHHHHHhCCCCEEEeccCC-----------CHHHHHHHHHHHHHhCCCccEEEEE
Q 021144 171 RRRVLILANSGADLIAFETIP-----------NKLEAKAYAELLEEEGITIPAWFSF 216 (317)
Q Consensus 171 ~~qi~~l~~~gvD~l~~ET~p-----------~~~Ea~a~~~~~~~~~~~~pv~iSf 216 (317)
.+.++.+.++|+|++-+-|+- ..+.++.+.++.++.+ +|++.++
T Consensus 40 ~~~a~~l~~~Ga~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~~G--l~~~te~ 94 (262)
T 1zco_A 40 MKVAEFLAEVGIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADEYG--LVTVTEV 94 (262)
T ss_dssp HHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHT--CEEEEEC
T ss_pred HHHHHHHHHcCCCEEEEEecccCCCcccccCccHHHHHHHHHHHHHcC--CcEEEee
Confidence 346777888999999988763 1667777788888876 9998766
No 201
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=61.97 E-value=7.2 Score=35.38 Aligned_cols=40 Identities=18% Similarity=0.158 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEE
Q 021144 168 EFHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAW 213 (317)
Q Consensus 168 ~~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~ 213 (317)
+.-.++++++.++|+|.|++|-+|. ++++.+.+ +. ++|++
T Consensus 161 ~~~i~rA~a~~eAGA~~ivlE~vp~-~~a~~it~---~l--~iP~i 200 (275)
T 1o66_A 161 QALLNDAKAHDDAGAAVVLMECVLA-ELAKKVTE---TV--SCPTI 200 (275)
T ss_dssp HHHHHHHHHHHHTTCSEEEEESCCH-HHHHHHHH---HC--SSCEE
T ss_pred HHHHHHHHHHHHcCCcEEEEecCCH-HHHHHHHH---hC--CCCEE
Confidence 4455689999999999999999994 45554443 33 37866
No 202
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=61.94 E-value=90 Score=28.01 Aligned_cols=193 Identities=13% Similarity=0.037 Sum_probs=98.3
Q ss_pred ChHHHHHHHHHHHHhhcccccc-ccccccHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCC
Q 021144 53 SPHLVRKVHLDYLDAGANIIIT-ASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (317)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~T-nTy~as~~~l~~~g~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (317)
+.+.+++.-+.++++|.+-|.. -|-+=. .-++.+|-.++++.+++.+. +
T Consensus 19 D~~~l~~lv~~li~~Gv~gi~v~GttGE~------~~Ls~~Er~~v~~~~~~~~~------------------------g 68 (297)
T 2rfg_A 19 DEKALAGLVDWQIKHGAHGLVPVGTTGES------PTLTEEEHKRVVALVAEQAQ------------------------G 68 (297)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECSSGGGTG------GGSCHHHHHHHHHHHHHHHT------------------------T
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccch------hhCCHHHHHHHHHHHHHHhC------------------------C
Confidence 4567888888889999995543 332211 12465666777777665442 2
Q ss_pred CCeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEeccC----CCHHHHHHHHHHHHHhC
Q 021144 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI----PNKLEAKAYAELLEEEG 207 (317)
Q Consensus 132 ~~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~ET~----p~~~Ea~a~~~~~~~~~ 207 (317)
+-+.|+| +|. .+.++..+ +++...+.|+|.+++=+= |+-+++..-.+.+.+..
T Consensus 69 rvpviaG-vg~------------------~~t~~ai~----la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~ 125 (297)
T 2rfg_A 69 RVPVIAG-AGS------------------NNPVEAVR----YAQHAQQAGADAVLCVAGYYNRPSQEGLYQHFKMVHDAI 125 (297)
T ss_dssp SSCBEEE-CCC------------------SSHHHHHH----HHHHHHHHTCSEEEECCCTTTCCCHHHHHHHHHHHHHHC
T ss_pred CCeEEEc-cCC------------------CCHHHHHH----HHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhc
Confidence 2345676 232 13444433 455666789999987542 46677776666655543
Q ss_pred CCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCCChhhhHHHHHHHHhhCCCcEEEEeCC-CCccc---c
Q 021144 208 ITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPRFIHGLILSVRKVTSKPVIIYPNS-GETYN---A 283 (317)
Q Consensus 208 ~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~~p~~~~~~l~~l~~~~~~pl~vyPNa-G~~~d---~ 283 (317)
++|+++== + .+++--.-+.+...+.+ +.+++.+|=--|.....+..++ +..+..+.+|.-. ....+ .
T Consensus 126 -~lPiilYn-~--P~~tg~~l~~~~~~~La-~~pnIvgiKds~gd~~~~~~~~----~~~~~~f~v~~G~d~~~l~~l~~ 196 (297)
T 2rfg_A 126 -DIPIIVYN-I--PPRAVVDIKPETMARLA-ALPRIVGVKDATTDLARISRER----MLINKPFSFLSGDDMTAIAYNAS 196 (297)
T ss_dssp -SSCEEEEE-C--HHHHSCCCCHHHHHHHH-TSTTEEEEEECSCCTTHHHHHH----TTCCSCCEEEESCGGGHHHHHHT
T ss_pred -CCCEEEEe-C--ccccCCCCCHHHHHHHH-cCCCEEEEEeCCCCHHHHHHHH----HhcCCCEEEEeCcHHHHHHHHHC
Confidence 69988421 1 12221223444444444 3345443333333444444433 2222235555322 11111 0
Q ss_pred cccccccc-CCCChhhHHHHHHHHH
Q 021144 284 ELKKWVVS-FSLHFFPLELILNPFA 307 (317)
Q Consensus 284 ~~~~w~~~-~~~~~~~~~~~~~~w~ 307 (317)
....|... ...-|+.+.+..+.|.
T Consensus 197 G~~G~is~~an~~P~~~~~l~~a~~ 221 (297)
T 2rfg_A 197 GGQGCISVSANIAPALYGQMQTATL 221 (297)
T ss_dssp TCCEEEESGGGTCHHHHHHHHHHHH
T ss_pred CCCEEEecHHHhhHHHHHHHHHHHH
Confidence 11233321 2355777766655554
No 203
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=61.80 E-value=43 Score=30.53 Aligned_cols=85 Identities=19% Similarity=0.098 Sum_probs=51.1
Q ss_pred HHHHHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEc
Q 021144 170 HRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGIN 249 (317)
Q Consensus 170 h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvN 249 (317)
+.++++.+.+.|+|++.+-.- ... .+++.+++. +.|+++.+ ++++.+....+ .++++|.+.
T Consensus 77 ~~~~~~~a~~~g~d~V~~~~g-~p~---~~i~~l~~~--g~~v~~~v-----------~~~~~a~~~~~--~GaD~i~v~ 137 (332)
T 2z6i_A 77 VEDIVDLVIEEGVKVVTTGAG-NPS---KYMERFHEA--GIIVIPVV-----------PSVALAKRMEK--IGADAVIAE 137 (332)
T ss_dssp HHHHHHHHHHTTCSEEEECSS-CGG---GTHHHHHHT--TCEEEEEE-----------SSHHHHHHHHH--TTCSCEEEE
T ss_pred HHHHHHHHHHCCCCEEEECCC-ChH---HHHHHHHHc--CCeEEEEe-----------CCHHHHHHHHH--cCCCEEEEE
Confidence 445777888899999976431 222 245556664 48888765 34555444333 367777663
Q ss_pred C---C---ChhhhHHHHHHHHhhCCCcEEE
Q 021144 250 C---T---SPRFIHGLILSVRKVTSKPVII 273 (317)
Q Consensus 250 C---~---~p~~~~~~l~~l~~~~~~pl~v 273 (317)
. . +......+++++++..+.|+++
T Consensus 138 g~~~GG~~g~~~~~~ll~~i~~~~~iPVia 167 (332)
T 2z6i_A 138 GMEAGGHIGKLTTMTLVRQVATAISIPVIA 167 (332)
T ss_dssp CTTSSEECCSSCHHHHHHHHHHHCSSCEEE
T ss_pred CCCCCCCCCCccHHHHHHHHHHhcCCCEEE
Confidence 2 1 1122346778887777888654
No 204
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=61.74 E-value=93 Score=28.13 Aligned_cols=46 Identities=20% Similarity=0.170 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHhCCCCEEEeccC----CCHHHHHHHHHHHHHhCCCcc-EEE
Q 021144 168 EFHRRRVLILANSGADLIAFETI----PNKLEAKAYAELLEEEGITIP-AWF 214 (317)
Q Consensus 168 ~~h~~qi~~l~~~gvD~l~~ET~----p~~~Ea~a~~~~~~~~~~~~p-v~i 214 (317)
+.....++.+.+.|+|++-++.- .+.++++.+++.....+ ..| |++
T Consensus 177 ~~v~~aa~~a~~lGaD~iKv~~~~~~~g~~~~~~~vv~~~~~~~-~~P~Vv~ 227 (304)
T 1to3_A 177 QAIIDAAKELGDSGADLYKVEMPLYGKGARSDLLTASQRLNGHI-NMPWVIL 227 (304)
T ss_dssp HHHHHHHHHHTTSSCSEEEECCGGGGCSCHHHHHHHHHHHHHTC-CSCEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEeCCCcCCCCCHHHHHHHHHhccccC-CCCeEEE
Confidence 34445688888899999988874 57788888887655543 478 543
No 205
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=61.60 E-value=69 Score=29.96 Aligned_cols=95 Identities=18% Similarity=0.203 Sum_probs=58.6
Q ss_pred HHHHHhCCCCEEEec-cCC---------C----HHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHH---HHHHH
Q 021144 174 VLILANSGADLIAFE-TIP---------N----KLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSIL---ECASI 236 (317)
Q Consensus 174 i~~l~~~gvD~l~~E-T~p---------~----~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~---~a~~~ 236 (317)
++...++|+|.+-+= ..+ + ++.++.+++.+++.+ ..+-+.|++.+.. -.++. ++++.
T Consensus 80 i~~a~~~g~~~v~i~~~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g--~~~~v~~~~ed~~----~~~~~~~~~~~~~ 153 (382)
T 2ztj_A 80 AKVAVETGVQGIDLLFGTSKYLRAPHGRDIPRIIEEAKEVIAYIREAA--PHVEVRFSAEDTF----RSEEQDLLAVYEA 153 (382)
T ss_dssp HHHHHHTTCSEEEEEECC--------CCCHHHHHHHHHHHHHHHHHHC--TTSEEEEEETTTT----TSCHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEEeccCHHHHHHhCCCHHHHHHHHHHHHHHHHHcC--CCEEEEEEEEeCC----CCCHHHHHHHHHH
Confidence 455667899977532 122 2 344667777788776 3355666665432 33444 44444
Q ss_pred hhcCCCceEEEEc----CCChhhhHHHHHHHHhh--CCCcEEEEeC
Q 021144 237 ADSCEQVVAVGIN----CTSPRFIHGLILSVRKV--TSKPVIIYPN 276 (317)
Q Consensus 237 ~~~~~~~~aiGvN----C~~p~~~~~~l~~l~~~--~~~pl~vyPN 276 (317)
+.+ . ++.|.+- +..|..+..+++.+++. .+.||.+...
T Consensus 154 ~~~-~-a~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~~i~~H~H 197 (382)
T 2ztj_A 154 VAP-Y-VDRVGLADTVGVATPRQVYALVREVRRVVGPRVDIEFHGH 197 (382)
T ss_dssp HGG-G-CSEEEEEETTSCCCHHHHHHHHHHHHHHHTTTSEEEEEEB
T ss_pred HHH-h-cCEEEecCCCCCCCHHHHHHHHHHHHHhcCCCCeEEEEeC
Confidence 444 3 5666553 33599999999999887 6788887763
No 206
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=61.49 E-value=23 Score=32.68 Aligned_cols=59 Identities=12% Similarity=0.066 Sum_probs=40.5
Q ss_pred HHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcC
Q 021144 176 ILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINC 250 (317)
Q Consensus 176 ~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC 250 (317)
..+++|+|.|.+.+++ +++++.+++.++ .+.++.+| .|-+++.+.+.+. .+++.|++-.
T Consensus 246 eAl~aGaD~I~LDn~~-~~~l~~av~~l~---~~v~ieaS----------GGIt~~~I~~~a~--tGVD~isvGa 304 (320)
T 3paj_A 246 EAISAGADIIMLDNFS-LEMMREAVKINA---GRAALENS----------GNITLDNLKECAE--TGVDYISVGA 304 (320)
T ss_dssp HHHHTTCSEEEEESCC-HHHHHHHHHHHT---TSSEEEEE----------SSCCHHHHHHHHT--TTCSEEECTH
T ss_pred HHHHcCCCEEEECCCC-HHHHHHHHHHhC---CCCeEEEE----------CCCCHHHHHHHHH--cCCCEEEECc
Confidence 3445799999999974 778888877655 23555544 3666776666554 5889888755
No 207
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=61.19 E-value=95 Score=28.04 Aligned_cols=152 Identities=16% Similarity=0.147 Sum_probs=85.0
Q ss_pred ChHHHHHHHHHHHHhhcccccc-ccccccHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCC
Q 021144 53 SPHLVRKVHLDYLDAGANIIIT-ASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (317)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~T-nTy~as~~~l~~~g~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (317)
+.+.+++.-+.++++|.+-|.. -|-+=. .-++.+|-.++++.+++.+. +
T Consensus 27 D~~~l~~lv~~li~~Gv~gl~v~GtTGE~------~~Ls~~Er~~v~~~~~~~~~------------------------g 76 (309)
T 3fkr_A 27 DLASQKRAVDFMIDAGSDGLCILANFSEQ------FAITDDERDVLTRTILEHVA------------------------G 76 (309)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEESSGGGTG------GGSCHHHHHHHHHHHHHHHT------------------------T
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCc------ccCCHHHHHHHHHHHHHHhC------------------------C
Confidence 4567888888889999994443 333311 12456667777777665441 2
Q ss_pred CCeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEecc-------CCCHHHHHHHHHHHH
Q 021144 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFET-------IPNKLEAKAYAELLE 204 (317)
Q Consensus 132 ~~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~ET-------~p~~~Ea~a~~~~~~ 204 (317)
+-+.|+|. |. .+.++..+ +++...+.|+|.+++=+ -|+.+++..-.+.+.
T Consensus 77 rvpviaGv-g~------------------~~t~~ai~----la~~A~~~Gadavlv~~Pyy~~~~~~s~~~l~~~f~~va 133 (309)
T 3fkr_A 77 RVPVIVTT-SH------------------YSTQVCAA----RSLRAQQLGAAMVMAMPPYHGATFRVPEAQIFEFYARVS 133 (309)
T ss_dssp SSCEEEEC-CC------------------SSHHHHHH----HHHHHHHTTCSEEEECCSCBTTTBCCCHHHHHHHHHHHH
T ss_pred CCcEEEec-CC------------------chHHHHHH----HHHHHHHcCCCEEEEcCCCCccCCCCCHHHHHHHHHHHH
Confidence 33467772 32 14444443 45667778999998864 245677777666665
Q ss_pred HhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCCC-hhhhHHHHHH
Q 021144 205 EEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTS-PRFIHGLILS 262 (317)
Q Consensus 205 ~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~~-p~~~~~~l~~ 262 (317)
+.. ++|+++= .+. . +--.-+++...+..++.+++.+|=.-|++ ...+..+++.
T Consensus 134 ~a~-~lPiilY-n~P--~-tg~~l~~~~~~~La~~~pnIvgiK~~~~~~~~~~~~~~~~ 187 (309)
T 3fkr_A 134 DAI-AIPIMVQ-DAP--A-SGTALSAPFLARMAREIEQVAYFXIETPGAANKLRELIRL 187 (309)
T ss_dssp HHC-SSCEEEE-ECG--G-GCCCCCHHHHHHHHHHSTTEEEEEECSSSHHHHHHHHHHH
T ss_pred Hhc-CCCEEEE-eCC--C-CCCCCCHHHHHHHHhhCCCEEEEECCCcchHHHHHHHHHh
Confidence 543 6998852 222 1 21223444444444334554443334654 3445555443
No 208
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=61.12 E-value=91 Score=27.83 Aligned_cols=149 Identities=19% Similarity=0.113 Sum_probs=81.7
Q ss_pred ChHHHHHHHHHHHH-hhcccccc-ccccccHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCC
Q 021144 53 SPHLVRKVHLDYLD-AGANIIIT-ASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRIS 130 (317)
Q Consensus 53 ~Pe~V~~iH~~Yl~-AGAdiI~T-nTy~as~~~l~~~g~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~~~~~~~ 130 (317)
+.+.+++.-+.+++ +|.+-|.. -|-+=. .-++.+|-.++++.+++.+.
T Consensus 22 D~~~l~~lv~~li~~~Gv~gl~~~GttGE~------~~Ls~~Er~~v~~~~~~~~~------------------------ 71 (293)
T 1f6k_A 22 NEKGLRQIIRHNIDKMKVDGLYVGGSTGEN------FMLSTEEKKEIFRIAKDEAK------------------------ 71 (293)
T ss_dssp CHHHHHHHHHHHHHTSCCSEEEESSGGGTG------GGSCHHHHHHHHHHHHHHHT------------------------
T ss_pred CHHHHHHHHHHHHhhCCCcEEEeCccccch------hhCCHHHHHHHHHHHHHHhC------------------------
Confidence 45678888888889 99995543 332211 13466667777777765542
Q ss_pred CCCeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEeccC----CCHHHHHHHHHHHHHh
Q 021144 131 SRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI----PNKLEAKAYAELLEEE 206 (317)
Q Consensus 131 ~~~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~ET~----p~~~Ea~a~~~~~~~~ 206 (317)
++-+.|+| +|. .+.++..+ +++...+.|+|.+++=+= |+.+++..-.+.+.+.
T Consensus 72 grvpviaG-vg~------------------~~t~~ai~----la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a 128 (293)
T 1f6k_A 72 DQIALIAQ-VGS------------------VNLKEAVE----LGKYATELGYDCLSAVTPFYYKFSFPEIKHYYDTIIAE 128 (293)
T ss_dssp TSSEEEEE-CCC------------------SCHHHHHH----HHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHH
T ss_pred CCCeEEEe-cCC------------------CCHHHHHH----HHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHh
Confidence 23346666 332 14444443 455667789999977542 4666666655555443
Q ss_pred CCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCC--ChhhhHHHHH
Q 021144 207 GITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCT--SPRFIHGLIL 261 (317)
Q Consensus 207 ~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~--~p~~~~~~l~ 261 (317)
. ++|+++== + .+++.-.-+++...+.+ +.++ .+||--+ ....+..+++
T Consensus 129 ~-~lPiilYn-~--P~~tg~~l~~~~~~~La-~~pn--IvgiK~s~gd~~~~~~~~~ 178 (293)
T 1f6k_A 129 T-GSNMIVYS-I--PFLTGVNMGIEQFGELY-KNPK--VLGVKFTAGDFYLLERLKK 178 (293)
T ss_dssp H-CCCEEEEE-C--HHHHCCCCCHHHHHHHH-TSTT--EEEEEECSCCHHHHHHHHH
T ss_pred C-CCCEEEEE-C--ccccCcCCCHHHHHHHh-cCCC--EEEEEECCCCHHHHHHHHH
Confidence 2 48988421 1 12221223455445544 3345 5555443 4445555443
No 209
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=61.04 E-value=60 Score=28.37 Aligned_cols=86 Identities=12% Similarity=0.070 Sum_probs=54.6
Q ss_pred HHHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCC
Q 021144 172 RRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCT 251 (317)
Q Consensus 172 ~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~ 251 (317)
++++...++|+|++.. |... ..+++++++.+ +|++... .++.++.+.++ .+++.|.+==+
T Consensus 97 ~~a~~Ai~AGA~fIvs---P~~~--~~vi~~~~~~g--i~~ipGv-----------~TptEi~~A~~--~Gad~vK~FPa 156 (232)
T 4e38_A 97 EQALAAKEAGATFVVS---PGFN--PNTVRACQEIG--IDIVPGV-----------NNPSTVEAALE--MGLTTLKFFPA 156 (232)
T ss_dssp HHHHHHHHHTCSEEEC---SSCC--HHHHHHHHHHT--CEEECEE-----------CSHHHHHHHHH--TTCCEEEECST
T ss_pred HHHHHHHHcCCCEEEe---CCCC--HHHHHHHHHcC--CCEEcCC-----------CCHHHHHHHHH--cCCCEEEECcC
Confidence 4677788899999984 4432 24455666655 8887532 26788888776 47888888443
Q ss_pred ChhhhHHHHHHHHhhC-CCcEEEEeCCCC
Q 021144 252 SPRFIHGLILSVRKVT-SKPVIIYPNSGE 279 (317)
Q Consensus 252 ~p~~~~~~l~~l~~~~-~~pl~vyPNaG~ 279 (317)
.+..=...|+.++... +.| +.|=+|-
T Consensus 157 ~~~gG~~~lkal~~p~p~ip--~~ptGGI 183 (232)
T 4e38_A 157 EASGGISMVKSLVGPYGDIR--LMPTGGI 183 (232)
T ss_dssp TTTTHHHHHHHHHTTCTTCE--EEEBSSC
T ss_pred ccccCHHHHHHHHHHhcCCC--eeeEcCC
Confidence 2211146777777653 345 4577764
No 210
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=60.91 E-value=15 Score=33.55 Aligned_cols=62 Identities=10% Similarity=0.054 Sum_probs=40.3
Q ss_pred HHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcC
Q 021144 173 RVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINC 250 (317)
Q Consensus 173 qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC 250 (317)
+++..+++|+|.|.+.+|+ ..+++.+++.++. +.++.+|- |-+++.+.++.. .+++.|++-.
T Consensus 210 ea~eAl~aGaD~I~LDn~~-~~~l~~av~~~~~---~v~ieaSG----------GIt~~~i~~~a~--tGVD~IsvGa 271 (287)
T 3tqv_A 210 ELNQAIAAKADIVMLDNFS-GEDIDIAVSIARG---KVALEVSG----------NIDRNSIVAIAK--TGVDFISVGA 271 (287)
T ss_dssp HHHHHHHTTCSEEEEESCC-HHHHHHHHHHHTT---TCEEEEES----------SCCTTTHHHHHT--TTCSEEECSH
T ss_pred HHHHHHHcCCCEEEEcCCC-HHHHHHHHHhhcC---CceEEEEC----------CCCHHHHHHHHH--cCCCEEEECh
Confidence 3444455899999999976 5778888776652 35555443 445555555544 5888888744
No 211
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=60.83 E-value=73 Score=28.95 Aligned_cols=95 Identities=7% Similarity=-0.045 Sum_probs=60.7
Q ss_pred HHHHHhCCCCEEEeccCC--------------CHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhc
Q 021144 174 VLILANSGADLIAFETIP--------------NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADS 239 (317)
Q Consensus 174 i~~l~~~gvD~l~~ET~p--------------~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~ 239 (317)
++.|.++||+.+-+|-.. +.+|+..-++++++.-.+.+++|--..+. .. ...+.++++.+..
T Consensus 104 v~~l~~aGaagv~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~ARTDa--~~--~~gldeai~Ra~a 179 (298)
T 3eoo_A 104 IRSFIKAGVGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMARTDA--AA--AEGIDAAIERAIA 179 (298)
T ss_dssp HHHHHHTTCSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECT--HH--HHHHHHHHHHHHH
T ss_pred HHHHHHhCCeEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEEeehh--hh--hcCHHHHHHHHHh
Confidence 677888999999999632 56676665655555432456666555433 22 2236777766532
Q ss_pred --CCCceEEEEcCC-ChhhhHHHHHHHHhhCCCcEEEEeC
Q 021144 240 --CEQVVAVGINCT-SPRFIHGLILSVRKVTSKPVIIYPN 276 (317)
Q Consensus 240 --~~~~~aiGvNC~-~p~~~~~~l~~l~~~~~~pl~vyPN 276 (317)
..|+++|=+-|. .++.+..+.+.+ +.|+++-+-
T Consensus 180 y~~AGAD~if~~~~~~~ee~~~~~~~~----~~Pl~~n~~ 215 (298)
T 3eoo_A 180 YVEAGADMIFPEAMKTLDDYRRFKEAV----KVPILANLT 215 (298)
T ss_dssp HHHTTCSEEEECCCCSHHHHHHHHHHH----CSCBEEECC
T ss_pred hHhcCCCEEEeCCCCCHHHHHHHHHHc----CCCeEEEec
Confidence 258899999997 467666666555 478766543
No 212
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=60.82 E-value=1e+02 Score=28.23 Aligned_cols=139 Identities=13% Similarity=0.034 Sum_probs=78.6
Q ss_pred ChHHHHHHHHHHHHhhcccccc-ccccccHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCC
Q 021144 53 SPHLVRKVHLDYLDAGANIIIT-ASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (317)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~T-nTy~as~~~l~~~g~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (317)
+.+.+++.-+.++++|.+-|.. -|-+=. .-++.+|-.++++.+++.+. +
T Consensus 53 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~------~~Ls~eEr~~vi~~~ve~~~------------------------g 102 (332)
T 2r8w_A 53 DIEAFSALIARLDAAEVDSVGILGSTGIY------MYLTREERRRAIEAAATILR------------------------G 102 (332)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEESSTTTTG------GGSCHHHHHHHHHHHHHHHT------------------------T
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCh------hhCCHHHHHHHHHHHHHHhC------------------------C
Confidence 4567888888899999996543 332211 12465667777777765542 2
Q ss_pred CCeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEeccC----CCHHHHHHHHHHHHHhC
Q 021144 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI----PNKLEAKAYAELLEEEG 207 (317)
Q Consensus 132 ~~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~ET~----p~~~Ea~a~~~~~~~~~ 207 (317)
+-+.|+| +|.. +.++..+ +++...+.|+|.+++=+= |+-+++..-.+.+.+..
T Consensus 103 rvpViaG-vg~~------------------st~eai~----la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~ 159 (332)
T 2r8w_A 103 RRTLMAG-IGAL------------------RTDEAVA----LAKDAEAAGADALLLAPVSYTPLTQEEAYHHFAAVAGAT 159 (332)
T ss_dssp SSEEEEE-ECCS------------------SHHHHHH----HHHHHHHHTCSEEEECCCCSSCCCHHHHHHHHHHHHHHC
T ss_pred CCcEEEe-cCCC------------------CHHHHHH----HHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc
Confidence 3346666 3431 3344443 455666789999987542 46677766666655543
Q ss_pred CCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCC
Q 021144 208 ITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCT 251 (317)
Q Consensus 208 ~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~ 251 (317)
++|+++= +..+++.-.-+++...+.+ +.++ .+||--+
T Consensus 160 -~lPiilY---n~P~~tg~~l~~e~~~~La-~~pn--IvgiKds 196 (332)
T 2r8w_A 160 -ALPLAIY---NNPTTTRFTFSDELLVRLA-YIPN--IRAIKMP 196 (332)
T ss_dssp -SSCEEEE---CCHHHHCCCCCHHHHHHHH-TSTT--EEEEEEC
T ss_pred -CCCEEEE---eCccccCcCCCHHHHHHHH-cCCC--EEEEEeC
Confidence 5998842 1112221223455444444 3344 5565443
No 213
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=60.72 E-value=95 Score=27.91 Aligned_cols=152 Identities=14% Similarity=-0.006 Sum_probs=83.2
Q ss_pred ChHHHHHHHHHHHHhhcccccc-ccccccHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCC
Q 021144 53 SPHLVRKVHLDYLDAGANIIIT-ASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (317)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~T-nTy~as~~~l~~~g~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (317)
+.+.+++.-+.++++|.+-|.. -|-+ +. .-++.+|-.++++.+++.+. +
T Consensus 30 D~~~l~~lv~~li~~Gv~Gl~v~GtTG---E~---~~Ls~eEr~~v~~~~~~~~~------------------------g 79 (303)
T 2wkj_A 30 DKASLRRLVQFNIQQGIDGLYVGGSTG---EA---FVQSLSEREQVLEIVAEEAK------------------------G 79 (303)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSTTT---TG---GGSCHHHHHHHHHHHHHHHT------------------------T
T ss_pred CHHHHHHHHHHHHHcCCCEEEECeecc---Ch---hhCCHHHHHHHHHHHHHHhC------------------------C
Confidence 4567888888889999996543 3322 11 12466667777777765542 2
Q ss_pred CCeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEeccC----CCHHHHHHHHHHHHHhC
Q 021144 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI----PNKLEAKAYAELLEEEG 207 (317)
Q Consensus 132 ~~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~ET~----p~~~Ea~a~~~~~~~~~ 207 (317)
+-+.|+| +|.. +.++..+ +++...+.|+|.+++=+= |+-+++..-.+.+.+..
T Consensus 80 rvpViaG-vg~~------------------~t~~ai~----la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~ 136 (303)
T 2wkj_A 80 KIKLIAH-VGCV------------------STAESQQ----LAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSA 136 (303)
T ss_dssp TSEEEEE-CCCS------------------SHHHHHH----HHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHH
T ss_pred CCcEEEe-cCCC------------------CHHHHHH----HHHHHHhCCCCEEEecCCCCCCCCHHHHHHHHHHHHHhC
Confidence 3346666 3321 3444433 455666789999977542 46777776666555543
Q ss_pred CCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCCChhhhHHHHH
Q 021144 208 ITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPRFIHGLIL 261 (317)
Q Consensus 208 ~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~~p~~~~~~l~ 261 (317)
.++|+++== + .+++--.-+++...+.+ +.+++.+|=--|.....+..+++
T Consensus 137 ~~lPiilYn-~--P~~tg~~l~~~~~~~La-~~pnIvgiK~s~gd~~~~~~~~~ 186 (303)
T 2wkj_A 137 DGLPMVVYN-I--PALSGVKLTLDQINTLV-TLPGVGALXQTSGDLYQMEQIRR 186 (303)
T ss_dssp TTCCEEEEE-C--HHHHCCCCCHHHHHHHH-TSTTEEEEEECCCCHHHHHHHHH
T ss_pred CCCCEEEEe-C--ccccCCCCCHHHHHHHh-cCCCEEEEeCCCCCHHHHHHHHH
Confidence 138988421 1 12221223455444544 33454444444444455555543
No 214
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=60.60 E-value=1.2e+02 Score=29.13 Aligned_cols=156 Identities=15% Similarity=0.083 Sum_probs=72.6
Q ss_pred CCeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEec---cCC------CHHHHHHH---
Q 021144 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFE---TIP------NKLEAKAY--- 199 (317)
Q Consensus 132 ~~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~E---T~p------~~~Ea~a~--- 199 (317)
.+.+|-|=+-=+.+...||+ + +.+++ .++++.+++.|+|+|=+- |-| .-+|++-+
T Consensus 189 ~~~~vMGIlNvTPDSFsDgg-~--------~~~~a----l~~A~~mv~~GAdIIDIGgeSTrPGa~~Vs~~EE~~Rv~pv 255 (442)
T 3mcm_A 189 ANTIRMGIVNLSNQSFSDGN-F--------DDNQR----KLNLDELIQSGAEIIDIGAESTKPDAKPISIEEEFNKLNEF 255 (442)
T ss_dssp CSSEEEEEEECSSCC-CCCS-S--------CCCHH----HHHHHHHHHHTCSEEEEECCCCCC----CCHHHHHHHHHHH
T ss_pred CCceEEEEEeCCCCCCCCCC-C--------CHHHH----HHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHH
Confidence 36788888877777776664 2 22333 346777888999998554 333 34566554
Q ss_pred HHHHHHhCCC--ccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCCChhhhHHHHHHHHhhCCCcEEEEeCC
Q 021144 200 AELLEEEGIT--IPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPRFIHGLILSVRKVTSKPVIIYPNS 277 (317)
Q Consensus 200 ~~~~~~~~~~--~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~~p~~~~~~l~~l~~~~~~pl~vyPNa 277 (317)
++++++..+. ..+.||+-.. .-.-+++|++.. . |++ +.||=.+-......++.+++ .+.|++++.+.
T Consensus 256 I~~l~~~~~~~~~~vpISIDT~------~~~VaeaAL~~~-a--Ga~-i~INDVsg~~d~~m~~v~a~-~g~~vVlMh~~ 324 (442)
T 3mcm_A 256 LEYFKSQLANLIYKPLVSIDTR------KLEVMQKILAKH-H--DII-WMINDVECNNIEQKAQLIAK-YNKKYVIIHNL 324 (442)
T ss_dssp HHHHHHHTTTCSSCCEEEEECC------CHHHHHHHHHHH-G--GGC-CEEEECCCTTHHHHHHHHHH-HTCEEEEECC-
T ss_pred HHHHHhhccccCCCCeEEEeCC------CHHHHHHHHhhC-C--CCC-EEEEcCCCCCChHHHHHHHH-hCCeEEEECCC
Confidence 5555541111 1356676211 111122233221 2 322 22454322223334444443 36899999999
Q ss_pred CCccccccccccccCCCChhhHHHHHHHHHHccc
Q 021144 278 GETYNAELKKWVVSFSLHFFPLELILNPFASCRL 311 (317)
Q Consensus 278 G~~~d~~~~~w~~~~~~~~~~~~~~~~~w~~~~~ 311 (317)
|.+-+-....+...-..--+.+.+.+....++|+
T Consensus 325 G~P~tmq~~~y~dvv~ev~~~l~~~i~~a~~aGI 358 (442)
T 3mcm_A 325 GITDRNQYLDKENAIDNVCDYIEQKKQILLKHGI 358 (442)
T ss_dssp ---------------CTHHHHHHHHHHHHHHHTC
T ss_pred CCCccccccCcccHHHHHHHHHHHHHHHHHHcCC
Confidence 9642211101110000012445666777777776
No 215
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=60.52 E-value=95 Score=27.84 Aligned_cols=143 Identities=15% Similarity=0.129 Sum_probs=74.0
Q ss_pred CeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEe---------ccCCCHHHHHHHHHHH
Q 021144 133 PVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAF---------ETIPNKLEAKAYAELL 203 (317)
Q Consensus 133 ~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~---------ET~p~~~Ea~a~~~~~ 203 (317)
+++|-|=+-=+.+...||+.| .+.+.+. .+++.+++.|+|+|=+ +.++.-+|..-++-++
T Consensus 6 r~~iMGIlNvTPDSFsDGG~~-------~~~~~a~----~~a~~m~~~GAdiIDIGgeSTRPga~~vs~eeE~~Rv~pvi 74 (270)
T 4hb7_A 6 KTKIMGILNVTPDSFSDGGKF-------NNVETAI----NRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVV 74 (270)
T ss_dssp CCEEEEEEECC-----------------CHHHHHH----HHHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCCCCCCCC-------CCHHHHH----HHHHHHHHCCCCEEEECCccCCCCCCCCchHHHHHHHHHHH
Confidence 567888887777777666443 2334333 3677788899999955 5566677777766666
Q ss_pred HHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCC----ChhhhHHHHHHHHhhCCCcEEEEeCCCC
Q 021144 204 EEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCT----SPRFIHGLILSVRKVTSKPVIIYPNSGE 279 (317)
Q Consensus 204 ~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~----~p~~~~~~l~~l~~~~~~pl~vyPNaG~ 279 (317)
+... ...+.+|+. -... ++++.+.+ .+++. ||=. ....|.+++.. .+.|++++-+.|.
T Consensus 75 ~~l~-~~~v~iSID---------T~~~-~Va~~al~-aGa~i--INDVs~g~~d~~m~~~va~----~~~~~vlMH~~~~ 136 (270)
T 4hb7_A 75 EAIV-GFDVKISVD---------TFRS-EVAEACLK-LGVDM--INDQWAGLYDHRMFQIVAK----YDAEIILMHNGNG 136 (270)
T ss_dssp HHHT-TSSSEEEEE---------CSCH-HHHHHHHH-HTCCE--EEETTTTSSCTHHHHHHHH----TTCEEEEECCCSS
T ss_pred HHhh-cCCCeEEEE---------CCCH-HHHHHHHH-hccce--eccccccccchhHHHHHHH----cCCCeEEeccccC
Confidence 6543 245677772 1122 33333322 24443 5532 22344444432 4789999988875
Q ss_pred c-cccccccccccCCCChhhHHHHHHHHHHccc
Q 021144 280 T-YNAELKKWVVSFSLHFFPLELILNPFASCRL 311 (317)
Q Consensus 280 ~-~d~~~~~w~~~~~~~~~~~~~~~~~w~~~~~ 311 (317)
+ |+....+ --+.|.+.+....++|+
T Consensus 137 p~~~~vv~e-------v~~~l~~~i~~a~~aGI 162 (270)
T 4hb7_A 137 NRDEPVVEE-------MLTSLLAQAHQAKIAGI 162 (270)
T ss_dssp CCSSCHHHH-------HHHHHHHHHHHHHHTTC
T ss_pred CccccchhH-------HHHHHHHHHHHHHHcCC
Confidence 4 2221000 01335555666666665
No 216
>1pv8_A Delta-aminolevulinic acid dehydratase; porphobilinogen synthase, tetrapyrrole biosynthesis, reactio intermediate, lyase; HET: PB1; 2.20A {Homo sapiens} SCOP: c.1.10.3 PDB: 1e51_A* 2z0i_A 2z1b_A
Probab=60.51 E-value=1.1e+02 Score=28.34 Aligned_cols=224 Identities=14% Similarity=0.144 Sum_probs=120.5
Q ss_pred HHHHHHHHHHHHhhccccccccccccHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCCC
Q 021144 55 HLVRKVHLDYLDAGANIIITASYQATIQGFEAK-GFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSRP 133 (317)
Q Consensus 55 e~V~~iH~~Yl~AGAdiI~TnTy~as~~~l~~~-g~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (317)
+.+.+.-++-++.|-.-|.. |+......++. |-+...-.-++.+|++..|++. .+
T Consensus 59 d~l~~~~~~~~~~Gi~~v~L--Fgvp~~~~Kd~~gs~A~~~~g~v~~air~iK~~~----------------------pd 114 (330)
T 1pv8_A 59 KRLEEMLRPLVEEGLRCVLI--FGVPSRVPKDERGSAADSEESPAIEAIHLLRKTF----------------------PN 114 (330)
T ss_dssp HHHHHHHHHHHHHTCCEEEE--EECC--------------CCSHHHHHHHHHHHHS----------------------TT
T ss_pred HHHHHHHHHHHHCCCCEEEE--ecCCcccCCCccccccCCCCChHHHHHHHHHHHC----------------------CC
Confidence 66777778888999775544 44422211222 2111111247888888777543 13
Q ss_pred eEEEEe--eCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCC-C-
Q 021144 134 VLVAAS--VGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGI-T- 209 (317)
Q Consensus 134 ~~Vags--iGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~-~- 209 (317)
.+|..+ +-||-..-++|--... + .+.-++-.+...+|+-..+++|+|+++==-|-+- .+.+|.+++.+.+- +
T Consensus 115 l~vitDvcLc~YT~HGHcGil~~~--g-~v~ND~Tl~~La~~Als~A~AGAdiVAPSdMMDG-rV~aIR~aLd~~G~~~~ 190 (330)
T 1pv8_A 115 LLVACDVCLCPYTSHGHCGLLSEN--G-AFRAEESRQRLAEVALAYAKAGCQVVAPSDMMDG-RVEAIKEALMAHGLGNR 190 (330)
T ss_dssp SEEEEEECCC------------------CHHHHHHHHHHHHHHHHHHHHTCSEEEECC--CC-HHHHHHHHHHHTTCTTT
T ss_pred eEEEEeeecccccCCCceeEECCC--C-cCccHHHHHHHHHHHHHHHHcCCCeeeccccccc-HHHHHHHHHHhCCCcCC
Confidence 555554 4555443333321100 1 1556777778888888899999999997666665 46788888888763 3
Q ss_pred ccEEEEEEEcCC---------------------CcccCCCcHHHHHHHhh--cCCCceEEEEcCCChhhhHHHHHHHHhh
Q 021144 210 IPAWFSFNSKDG---------------------INVVSGDSILECASIAD--SCEQVVAVGINCTSPRFIHGLILSVRKV 266 (317)
Q Consensus 210 ~pv~iSf~~~~~---------------------~~l~~G~~l~~a~~~~~--~~~~~~aiGvNC~~p~~~~~~l~~l~~~ 266 (317)
+|++ |.+.+=. ..-.|--.-.++++.+. -..|.+.|.|-=.-| -+.+++.+++.
T Consensus 191 v~Im-sYsaKyASafYGPFRdAa~Sap~~GDRktYQmdpaN~~EAlre~~~Di~EGAD~vMVKPal~--YLDIi~~vk~~ 267 (330)
T 1pv8_A 191 VSVM-SYSAKFASCFYGPFRDAAKSSPAFGDRRCYQLPPGARGLALRAVDRDVREGADMLMVKPGMP--YLDIVREVKDK 267 (330)
T ss_dssp CEEB-CCCEECCCGGGHHHHHCC-------------CCTTCHHHHHHHHHHHHHTTCSBEEEESCGG--GHHHHHHHHHH
T ss_pred ceEe-ehhHHHhHhhhhHHHHHHhcCCCCCCccccCCCCCCHHHHHHHHHhhHHhCCceEEEecCcc--HHHHHHHHHHh
Confidence 3433 5443210 01112222334444332 124788888876544 35678888888
Q ss_pred C-CCcEEEEeCCCCc---cccccccccccCCCChhhHHHHHHHHHHccccc
Q 021144 267 T-SKPVIIYPNSGET---YNAELKKWVVSFSLHFFPLELILNPFASCRLIS 313 (317)
Q Consensus 267 ~-~~pl~vyPNaG~~---~d~~~~~w~~~~~~~~~~~~~~~~~w~~~~~~~ 313 (317)
+ +.|+.+|-=+||- .-...+.|... .....+....+.++|.=-
T Consensus 268 ~p~~P~aaYqVSGEYAMikaAa~~GwiD~----~~~v~Esl~~~kRAGAd~ 314 (330)
T 1pv8_A 268 HPDLPLAVYHVSGEFAMLWHGAQAGAFDL----KAAVLEAMTAFRRAGADI 314 (330)
T ss_dssp STTSCEEEEECHHHHHHHHHHHHTTSSCH----HHHHHHHHHHHHHHTCSE
T ss_pred cCCCCeEEEEcCcHHHHHHHHHHcCCccH----HHHHHHHHHHHHhcCCCE
Confidence 8 8999999999962 23334567521 223555566666666533
No 217
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=60.20 E-value=14 Score=33.90 Aligned_cols=61 Identities=20% Similarity=0.186 Sum_probs=40.7
Q ss_pred HHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcC
Q 021144 174 VLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINC 250 (317)
Q Consensus 174 i~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC 250 (317)
++..+++|+|.|.+.+|+ .++++.+++.++. +.++-+| -|-+++.+.++.. .+++.|++-.
T Consensus 220 ~~eAl~aGaDiImLDn~s-~~~l~~av~~~~~---~v~leaS----------GGIt~~~i~~~A~--tGVD~IsvGa 280 (300)
T 3l0g_A 220 VEESLSNNVDMILLDNMS-ISEIKKAVDIVNG---KSVLEVS----------GCVNIRNVRNIAL--TGVDYISIGC 280 (300)
T ss_dssp HHHHHHTTCSEEEEESCC-HHHHHHHHHHHTT---SSEEEEE----------SSCCTTTHHHHHT--TTCSEEECGG
T ss_pred HHHHHHcCCCEEEECCCC-HHHHHHHHHhhcC---ceEEEEE----------CCCCHHHHHHHHH--cCCCEEEeCc
Confidence 444455899999999986 5888888876652 2333333 3455555555554 5899998876
No 218
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=60.03 E-value=1e+02 Score=28.05 Aligned_cols=160 Identities=8% Similarity=0.049 Sum_probs=88.8
Q ss_pred ccCCChHHHHHHHHHHHHhhcc----cccccccc-ccHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCC
Q 021144 49 CLVSSPHLVRKVHLDYLDAGAN----IIITASYQ-ATIQGFEA-KGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWD 122 (317)
Q Consensus 49 ~ll~~Pe~V~~iH~~Yl~AGAd----iI~TnTy~-as~~~l~~-~g~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~ 122 (317)
+.++++|.+.++-+..-++|++ +|..+.|. |+|-+... .|+.. +++.++.+++++++
T Consensus 49 Csies~e~~~~~A~~lk~~~~~~~~~~v~k~~f~KapRTs~~sf~Glg~-------~~GL~~L~~~~~e~---------- 111 (298)
T 3fs2_A 49 CQMETRDHAFEMAGRLKEMTDKLGIGLVYKSSFDKANRTSLKAARGIGL-------EKALEVFSDLKKEY---------- 111 (298)
T ss_dssp SBCCCHHHHHHHHHHHHHHHHHHTCCEEEECBCCCCC---------CCH-------HHHHHHHHHHHHHH----------
T ss_pred CcCCCHHHHHHHHHHHHHHHHHcCCcEEEEcccccCCCCCCCCcCCcCH-------HHHHHHHHHHHHhc----------
Confidence 4589999999888888877754 45555553 23333211 14442 23455566666543
Q ss_pred CCCCCCCCCCCeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEecc--CCCHHHHHHHH
Q 021144 123 FTGSGRISSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFET--IPNKLEAKAYA 200 (317)
Q Consensus 123 ~~~~~~~~~~~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~ET--~p~~~Ea~a~~ 200 (317)
.+-++-+ . .+. ++++.+.+- ||++-+-. +.+.. .+
T Consensus 112 ----------GLpv~Te----------------v----~D~--------~~v~~l~~~-vd~lkIgA~~~~n~~----LL 148 (298)
T 3fs2_A 112 ----------GFPVLTD----------------I----HTE--------EQCAAVAPV-VDVLQIPAFLCRQTD----LL 148 (298)
T ss_dssp ----------CCCEEEE----------------C----CSH--------HHHHHHTTT-CSEEEECGGGTTCHH----HH
T ss_pred ----------CCeEEEE----------------e----CCH--------HHHHHHHhh-CCEEEECccccCCHH----HH
Confidence 1212211 0 122 245556665 99998775 34444 33
Q ss_pred HHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCCC---hhh---hHHHHHHHHhhCCCcEEEE
Q 021144 201 ELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTS---PRF---IHGLILSVRKVTSKPVIIY 274 (317)
Q Consensus 201 ~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~~---p~~---~~~~l~~l~~~~~~pl~vy 274 (317)
+.+... ++||.++= |.-.+=..+..+++.+....+...+.+-|+. ++. =...+..+++ +..|+++.
T Consensus 149 r~va~~--gkPVilK~-----Gms~t~~ei~~ave~i~~~Gn~~iiL~erg~~y~~~~~~vdl~~i~~lk~-~~~PV~~D 220 (298)
T 3fs2_A 149 IAAART--GRVVNVKK-----GQFLAPWDMKNVLAKITESGNPNVLATERGVSFGYNTLVSDMRALPIMAG-LGAPVIFD 220 (298)
T ss_dssp HHHHHT--TSEEEEEC-----CTTCCGGGHHHHHHHHHTTTCCCEEEEECCEECSSSCEECCTTHHHHHHT-TTSCEEEE
T ss_pred HHHHcc--CCcEEEeC-----CCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccCHHHHHHHHH-cCCcEEEc
Confidence 334444 49999764 2211223456788887664455678888863 222 1455677887 78999886
Q ss_pred eC
Q 021144 275 PN 276 (317)
Q Consensus 275 PN 276 (317)
|.
T Consensus 221 ~s 222 (298)
T 3fs2_A 221 AT 222 (298)
T ss_dssp HH
T ss_pred CC
Confidence 53
No 219
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=59.73 E-value=1.1e+02 Score=28.16 Aligned_cols=82 Identities=15% Similarity=0.155 Sum_probs=46.7
Q ss_pred HHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCC--cHHHHHHHh-hc-CCCceEEEEc
Q 021144 174 VLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGD--SILECASIA-DS-CEQVVAVGIN 249 (317)
Q Consensus 174 i~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~--~l~~a~~~~-~~-~~~~~aiGvN 249 (317)
+..+.+.|+|+|-++.-.++.|++.. .+.+ +.+.-.++. . ++.|+ .+.+.++.+ +. ..+-..++..
T Consensus 269 l~~l~~~g~d~i~~d~~~dl~~a~~~------~g~~--~~l~Gnldp-~-~L~gt~e~i~~~v~~~l~~~g~~g~I~~~g 338 (367)
T 1r3s_A 269 LEELAQAGYEVVGLDWTVAPKKAREC------VGKT--VTLQGNLDP-C-ALYASEEEIGQLVKQMLDDFGPHRYIANLG 338 (367)
T ss_dssp HHHHTTSSCSEEECCTTSCHHHHHHH------HCSS--SEEEEEECG-G-GGGSCHHHHHHHHHHHHHHHCSSSEEEEES
T ss_pred HHHHHhcCCCEEEeCCCCCHHHHHHH------cCCC--eEEEeCCCh-H-HhcCCHHHHHHHHHHHHHHhCCCCeeecCC
Confidence 44677899999999977788776543 2322 334445554 3 33453 233333222 22 1234677777
Q ss_pred CC-----ChhhhHHHHHHHHh
Q 021144 250 CT-----SPRFIHGLILSVRK 265 (317)
Q Consensus 250 C~-----~p~~~~~~l~~l~~ 265 (317)
|. .|+.+..+++..++
T Consensus 339 hgi~~~~p~env~a~v~~v~~ 359 (367)
T 1r3s_A 339 HGLYPDMDPEHVGAFVDAVHK 359 (367)
T ss_dssp SCCCTTCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHH
Confidence 84 35677777766554
No 220
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=59.72 E-value=1e+02 Score=27.83 Aligned_cols=149 Identities=13% Similarity=0.030 Sum_probs=81.4
Q ss_pred ChHHHHHHHHHHHHhhccccc-cccccccHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCC
Q 021144 53 SPHLVRKVHLDYLDAGANIII-TASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (317)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~-TnTy~as~~~l~~~g~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (317)
+.+.+++.-+.++++|.+-|. .-|-+=. . -++.+|-.++++.+++.+ .+
T Consensus 33 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~-~-----~Ls~~Er~~v~~~~~~~~------------------------~g 82 (307)
T 3s5o_A 33 DYGKLEENLHKLGTFPFRGFVVQGSNGEF-P-----FLTSSERLEVVSRVRQAM------------------------PK 82 (307)
T ss_dssp CHHHHHHHHHHHTTSCCSEEEESSGGGTG-G-----GSCHHHHHHHHHHHHHTS------------------------CT
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccch-h-----hCCHHHHHHHHHHHHHHc------------------------CC
Confidence 456788888888999998443 3332211 1 245566666666555432 12
Q ss_pred CCeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEeccC------CCHHHHHHHHHHHHH
Q 021144 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI------PNKLEAKAYAELLEE 205 (317)
Q Consensus 132 ~~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~ET~------p~~~Ea~a~~~~~~~ 205 (317)
+-+.|+| +|. .+.++..+ +++...+.|+|.+++=+= ++-+++..-.+.+.+
T Consensus 83 r~pviaG-vg~------------------~~t~~ai~----la~~A~~~Gadavlv~~P~y~~~~~s~~~l~~~f~~ia~ 139 (307)
T 3s5o_A 83 NRLLLAG-SGC------------------ESTQATVE----MTVSMAQVGADAAMVVTPCYYRGRMSSAALIHHYTKVAD 139 (307)
T ss_dssp TSEEEEE-CCC------------------SSHHHHHH----HHHHHHHTTCSEEEEECCCTTGGGCCHHHHHHHHHHHHH
T ss_pred CCcEEEe-cCC------------------CCHHHHHH----HHHHHHHcCCCEEEEcCCCcCCCCCCHHHHHHHHHHHHh
Confidence 3456776 332 13444443 455667789999988542 366677766666655
Q ss_pred hCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCC--ChhhhHHHHH
Q 021144 206 EGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCT--SPRFIHGLIL 261 (317)
Q Consensus 206 ~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~--~p~~~~~~l~ 261 (317)
.. ++|+++== + .+++--.-+++...+.+ +.++ .+||--+ ....+..+++
T Consensus 140 a~-~lPiilYn-~--P~~tg~~l~~~~~~~La-~~pn--IvgiKdssgd~~~~~~~~~ 190 (307)
T 3s5o_A 140 LS-PIPVVLYS-V--PANTGLDLPVDAVVTLS-QHPN--IVGMXDSGGDVTRIGLIVH 190 (307)
T ss_dssp HC-SSCEEEEE-C--HHHHSCCCCHHHHHHHH-TSTT--EEEEEECSCCHHHHHHHHH
T ss_pred hc-CCCEEEEe-C--CcccCCCCCHHHHHHHh-cCCC--EEEEEcCCCCHHHHHHHHH
Confidence 43 69998421 1 12322223455555444 3445 5566554 3444444443
No 221
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=59.42 E-value=44 Score=29.96 Aligned_cols=64 Identities=19% Similarity=0.096 Sum_probs=45.1
Q ss_pred HHHHHHhCCCCEEEecc-CCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCC
Q 021144 173 RVLILANSGADLIAFET-IPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCT 251 (317)
Q Consensus 173 qi~~l~~~gvD~l~~ET-~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~ 251 (317)
|+......|+|.+++=+ .-+..+++.+++.+++.+ +-+++.+ .+.+++-..+. .+++.||+|=.
T Consensus 134 qi~ea~~~GAD~VlLi~a~L~~~~l~~l~~~a~~lG--l~~lvev-----------h~~eEl~~A~~--~ga~iIGinnr 198 (272)
T 3tsm_A 134 QVYEARSWGADCILIIMASVDDDLAKELEDTAFALG--MDALIEV-----------HDEAEMERALK--LSSRLLGVNNR 198 (272)
T ss_dssp HHHHHHHTTCSEEEEETTTSCHHHHHHHHHHHHHTT--CEEEEEE-----------CSHHHHHHHTT--SCCSEEEEECB
T ss_pred HHHHHHHcCCCEEEEcccccCHHHHHHHHHHHHHcC--CeEEEEe-----------CCHHHHHHHHh--cCCCEEEECCC
Confidence 46666779999987763 555678888888888876 6666555 24566655543 47899999953
No 222
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=59.04 E-value=59 Score=26.93 Aligned_cols=83 Identities=11% Similarity=0.055 Sum_probs=48.6
Q ss_pred HHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCCCh
Q 021144 174 VLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSP 253 (317)
Q Consensus 174 i~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~~p 253 (317)
++...+.|+|++ +-.... ..+++.+++.+ +|++.-+ .+..++.+.+. .+++.|.++-..+
T Consensus 76 ~~~a~~~Gad~i-v~~~~~----~~~~~~~~~~g--~~vi~g~-----------~t~~e~~~a~~--~Gad~vk~~~~~~ 135 (205)
T 1wa3_A 76 CRKAVESGAEFI-VSPHLD----EEISQFCKEKG--VFYMPGV-----------MTPTELVKAMK--LGHTILKLFPGEV 135 (205)
T ss_dssp HHHHHHHTCSEE-ECSSCC----HHHHHHHHHHT--CEEECEE-----------CSHHHHHHHHH--TTCCEEEETTHHH
T ss_pred HHHHHHcCCCEE-EcCCCC----HHHHHHHHHcC--CcEECCc-----------CCHHHHHHHHH--cCCCEEEEcCccc
Confidence 444555899999 443333 23566677765 8888522 23456655554 4788998875322
Q ss_pred hhhHHHHHHHHhhC-CCcEEEEeCCCC
Q 021144 254 RFIHGLILSVRKVT-SKPVIIYPNSGE 279 (317)
Q Consensus 254 ~~~~~~l~~l~~~~-~~pl~vyPNaG~ 279 (317)
. -...++++++.. +.| +.+-+|-
T Consensus 136 ~-g~~~~~~l~~~~~~~p--via~GGI 159 (205)
T 1wa3_A 136 V-GPQFVKAMKGPFPNVK--FVPTGGV 159 (205)
T ss_dssp H-HHHHHHHHHTTCTTCE--EEEBSSC
T ss_pred c-CHHHHHHHHHhCCCCc--EEEcCCC
Confidence 2 235566666654 445 5666664
No 223
>2fp4_B Succinyl-COA ligase [GDP-forming] beta-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.23.4.1 d.142.1.4 PDB: 2fpg_B* 2fpi_B* 2fpp_B* 1euc_B* 1eud_B*
Probab=58.94 E-value=38 Score=32.01 Aligned_cols=67 Identities=16% Similarity=0.197 Sum_probs=45.7
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEe---ccCCCHHH-HHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHH
Q 021144 161 VSLETLKEFHRRRVLILANSGADLIAF---ETIPNKLE-AKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASI 236 (317)
Q Consensus 161 ~s~~el~~~h~~qi~~l~~~gvD~l~~---ET~p~~~E-a~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~ 236 (317)
.+.+.++..++- .+.+.+||.+++ -.+.+.++ ++++++++++.+.++|+++.+ .|+..++..+.
T Consensus 300 a~~e~~~~al~~---il~d~~v~~ilvni~ggi~~~d~vA~gii~a~~~~~~~~Pivvrl---------~G~n~~~g~~~ 367 (395)
T 2fp4_B 300 VKESQVYQAFKL---LTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRL---------EGTNVHEAQNI 367 (395)
T ss_dssp CCHHHHHHHHHH---HHHCTTCCEEEEEEEESSSCHHHHHHHHHHHHHHHTCCSCEEEEE---------EETTHHHHHHH
T ss_pred CCHHHHHHHHHH---HhCCCCCCEEEEEecCCccCcHHHHHHHHHHHHhcCCCCeEEEEc---------CCCCHHHHHHH
Confidence 466666655432 235688999985 34455433 678999999865569999855 57777777777
Q ss_pred hhc
Q 021144 237 ADS 239 (317)
Q Consensus 237 ~~~ 239 (317)
+.+
T Consensus 368 L~~ 370 (395)
T 2fp4_B 368 LTN 370 (395)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
No 224
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=58.85 E-value=1e+02 Score=27.72 Aligned_cols=150 Identities=15% Similarity=0.103 Sum_probs=84.3
Q ss_pred ChHHHHHHHHHHHHhhccccc-cccccccHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCC
Q 021144 53 SPHLVRKVHLDYLDAGANIII-TASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (317)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~-TnTy~as~~~l~~~g~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (317)
+.+.+++.-+.++++|.+-|. .-|-+=. .-++.+|-.++++.+++.+. +
T Consensus 34 D~~~l~~lv~~li~~Gv~gi~v~GttGE~------~~Lt~~Er~~v~~~~~~~~~------------------------g 83 (304)
T 3l21_A 34 DTATAARLANHLVDQGCDGLVVSGTTGES------PTTTDGEKIELLRAVLEAVG------------------------D 83 (304)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSTTTTG------GGSCHHHHHHHHHHHHHHHT------------------------T
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccch------hhCCHHHHHHHHHHHHHHhC------------------------C
Confidence 457888888888999999544 3343321 12455666777776665442 2
Q ss_pred CCeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEecc----CCCHHHHHHHHHHHHHhC
Q 021144 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFET----IPNKLEAKAYAELLEEEG 207 (317)
Q Consensus 132 ~~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~ET----~p~~~Ea~a~~~~~~~~~ 207 (317)
+-+.|+| +|.. +.++..+ +++...+.|+|.+++=+ -|+.+++..-.+.+.+.-
T Consensus 84 rvpviaG-vg~~------------------~t~~ai~----la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~ 140 (304)
T 3l21_A 84 RARVIAG-AGTY------------------DTAHSIR----LAKACAAEGAHGLLVVTPYYSKPPQRGLQAHFTAVADAT 140 (304)
T ss_dssp TSEEEEE-CCCS------------------CHHHHHH----HHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTSC
T ss_pred CCeEEEe-CCCC------------------CHHHHHH----HHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc
Confidence 3356676 3331 3444433 45566678999998754 235677766666666543
Q ss_pred CCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCCChhhhHHHH
Q 021144 208 ITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPRFIHGLI 260 (317)
Q Consensus 208 ~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~~p~~~~~~l 260 (317)
++|+++== + .+++.-.-+.+...+.. +.+++.+|=--|.....+..++
T Consensus 141 -~lPiilYn-~--P~~tg~~l~~~~~~~La-~~pnIvgiKdssgd~~~~~~~~ 188 (304)
T 3l21_A 141 -ELPMLLYD-I--PGRSAVPIEPDTIRALA-SHPNIVGVXDAKADLHSGAQIM 188 (304)
T ss_dssp -SSCEEEEE-C--HHHHSSCCCHHHHHHHH-TSTTEEEEEECSCCHHHHHHHH
T ss_pred -CCCEEEEe-C--ccccCCCCCHHHHHHHh-cCCCEEEEECCCCCHHHHHHHh
Confidence 69998532 1 12222233445455444 4445444433344455555554
No 225
>3ist_A Glutamate racemase; structural genomics, cell WALL biogenesis/degradation, isomerase, peptidoglycan synthesis; HET: MSE; 1.65A {Listeria monocytogenes} PDB: 3hfr_A* 3isv_A*
Probab=58.61 E-value=22 Score=31.82 Aligned_cols=35 Identities=20% Similarity=0.374 Sum_probs=28.7
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEe--ccCC
Q 021144 156 DYGDAVSLETLKEFHRRRVLILANSGADLIAF--ETIP 191 (317)
Q Consensus 156 ~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~--ET~p 191 (317)
+||. -+.+++.++-.+.++.|.+.|+|+|++ -|.+
T Consensus 43 PYG~-ks~~~i~~~~~~~~~~L~~~g~~~IVIACNTa~ 79 (269)
T 3ist_A 43 PYGP-RDKEEVAKFTWEMTNFLVDRGIKMLVIACNTAT 79 (269)
T ss_dssp CCTT-SCHHHHHHHHHHHHHHHHHTTCSEEEECCHHHH
T ss_pred CCCC-CCHHHHHHHHHHHHHHHHHCCCCEEEEeCCCcc
Confidence 3444 688999999999999999999999977 4555
No 226
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=58.56 E-value=39 Score=28.76 Aligned_cols=84 Identities=15% Similarity=0.171 Sum_probs=45.0
Q ss_pred HHHHHHHHhCCCCEEEec-----cCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceE
Q 021144 171 RRRVLILANSGADLIAFE-----TIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVA 245 (317)
Q Consensus 171 ~~qi~~l~~~gvD~l~~E-----T~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~a 245 (317)
.+.++.+.++|+|+|=+= .++++......++.+++.. +.|+.+-+.+.+ ..+.++.+.+ .++++
T Consensus 26 ~~~i~~~~~~G~d~i~l~~~dg~f~~~~~~~~~~i~~l~~~~-~~~~~v~l~vnd---------~~~~v~~~~~-~Gad~ 94 (230)
T 1rpx_A 26 GEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPIT-DLPLDVHLMIVE---------PDQRVPDFIK-AGADI 94 (230)
T ss_dssp HHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHGGGC-CSCEEEEEESSS---------HHHHHHHHHH-TTCSE
T ss_pred HHHHHHHHHCCCCEEEEeeccCCcccccccCHHHHHHHHhcc-CCcEEEEEEecC---------HHHHHHHHHH-cCCCE
Confidence 346778888999988552 2344322223344455543 478888776654 2233333333 35666
Q ss_pred EEEcCC--ChhhhHHHHHHHHh
Q 021144 246 VGINCT--SPRFIHGLILSVRK 265 (317)
Q Consensus 246 iGvNC~--~p~~~~~~l~~l~~ 265 (317)
|-+-+. .++.....++.+++
T Consensus 95 v~vh~~~~~~~~~~~~~~~~~~ 116 (230)
T 1rpx_A 95 VSVHCEQSSTIHLHRTINQIKS 116 (230)
T ss_dssp EEEECSTTTCSCHHHHHHHHHH
T ss_pred EEEEecCccchhHHHHHHHHHH
Confidence 655554 33344455555544
No 227
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=58.37 E-value=14 Score=32.22 Aligned_cols=49 Identities=20% Similarity=0.212 Sum_probs=35.9
Q ss_pred HHHHHHHhCCCCEEEe-----ccCCCHHHHHHHHHHHHHh-CCCccEEEEEEEcC
Q 021144 172 RRVLILANSGADLIAF-----ETIPNKLEAKAYAELLEEE-GITIPAWFSFNSKD 220 (317)
Q Consensus 172 ~qi~~l~~~gvD~l~~-----ET~p~~~Ea~a~~~~~~~~-~~~~pv~iSf~~~~ 220 (317)
+.++.+.++|+|.+-+ -.+|++..-..+++.+++. ++++|+-+-+-+.+
T Consensus 21 ~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~G~~~v~~ir~~~~~~~~~dvhLmv~~ 75 (228)
T 3ovp_A 21 AECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSK 75 (228)
T ss_dssp HHHHHHHHTTCSCEEEEEEBSSSSSCBCBCHHHHHHHHHHHCSSSCEEEEEECSC
T ss_pred HHHHHHHHcCCCEEEEEecCCCcCcccccCHHHHHHHHHhhCCCCcEEEEEEeCC
Confidence 4677788899999988 5567777666777788876 34688887776643
No 228
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=58.21 E-value=82 Score=28.58 Aligned_cols=87 Identities=14% Similarity=0.044 Sum_probs=54.4
Q ss_pred HHHHHhCCC-CEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCCC
Q 021144 174 VLILANSGA-DLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTS 252 (317)
Q Consensus 174 i~~l~~~gv-D~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~~ 252 (317)
+....++|. ++|..+. .+.+++...++.+++.. +.|+.+.+.+.+ ..+.+.++.+.+ .++++|-+++..
T Consensus 29 a~av~~aG~lG~i~~~~-~~~~~~~~~i~~i~~~~-~~p~gvnl~~~~-------~~~~~~~~~a~~-~g~d~V~~~~g~ 98 (332)
T 2z6i_A 29 AGAVSKAGGLGIIGGGN-APKEVVKANIDKIKSLT-DKPFGVNIMLLS-------PFVEDIVDLVIE-EGVKVVTTGAGN 98 (332)
T ss_dssp HHHHHHHTSBEEEECTT-CCHHHHHHHHHHHHHHC-CSCEEEEECTTS-------TTHHHHHHHHHH-TTCSEEEECSSC
T ss_pred HHHHHhCCCcEEeCCCC-CCHHHHHHHHHHHHHhc-CCCEEEEecCCC-------CCHHHHHHHHHH-CCCCEEEECCCC
Confidence 444555564 7775554 46778777777777754 578888775421 236677776665 488999999987
Q ss_pred hhhhHHHHHHHHhhCCCcEEEE
Q 021144 253 PRFIHGLILSVRKVTSKPVIIY 274 (317)
Q Consensus 253 p~~~~~~l~~l~~~~~~pl~vy 274 (317)
|..+.+.++ + .+.|+++.
T Consensus 99 p~~~i~~l~---~-~g~~v~~~ 116 (332)
T 2z6i_A 99 PSKYMERFH---E-AGIIVIPV 116 (332)
T ss_dssp GGGTHHHHH---H-TTCEEEEE
T ss_pred hHHHHHHHH---H-cCCeEEEE
Confidence 755444433 3 24555543
No 229
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=57.96 E-value=87 Score=28.36 Aligned_cols=97 Identities=9% Similarity=-0.019 Sum_probs=57.1
Q ss_pred HHHHHHhCCCCEEEeccC--------------CCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhh
Q 021144 173 RVLILANSGADLIAFETI--------------PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIAD 238 (317)
Q Consensus 173 qi~~l~~~gvD~l~~ET~--------------p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~ 238 (317)
-++.|.++|++.+-+|-- -...|...-++++++.....++.|.-..+. .... .+.++++.+.
T Consensus 99 ~v~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRtda--~~~~--gl~~ai~ra~ 174 (295)
T 1xg4_A 99 TVKSMIKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDA--LAVE--GLDAAIERAQ 174 (295)
T ss_dssp HHHHHHHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECC--HHHH--CHHHHHHHHH
T ss_pred HHHHHHHcCCeEEEECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEEEecHH--hhhc--CHHHHHHHHH
Confidence 355666789999999964 345566555556655543456666554432 1212 2455554432
Q ss_pred c--CCCceEEEEcCCC-hhhhHHHHHHHHhhCCCcEEEEeCC
Q 021144 239 S--CEQVVAVGINCTS-PRFIHGLILSVRKVTSKPVIIYPNS 277 (317)
Q Consensus 239 ~--~~~~~aiGvNC~~-p~~~~~~l~~l~~~~~~pl~vyPNa 277 (317)
. ..|+++|=+-|.. ++.+..+.+. .+.|+++-+-.
T Consensus 175 ay~eAGAd~i~~e~~~~~~~~~~i~~~----~~iP~~~N~~~ 212 (295)
T 1xg4_A 175 AYVEAGAEMLFPEAITELAMYRQFADA----VQVPILANITE 212 (295)
T ss_dssp HHHHTTCSEEEETTCCSHHHHHHHHHH----HCSCBEEECCS
T ss_pred HHHHcCCCEEEEeCCCCHHHHHHHHHH----cCCCEEEEecc
Confidence 1 2588999999974 4555554444 45787765543
No 230
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=57.91 E-value=90 Score=27.56 Aligned_cols=99 Identities=14% Similarity=0.167 Sum_probs=60.7
Q ss_pred HHHHHHHHHh-CCCCEEEeccC------------CCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHH
Q 021144 170 HRRRVLILAN-SGADLIAFETI------------PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASI 236 (317)
Q Consensus 170 h~~qi~~l~~-~gvD~l~~ET~------------p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~ 236 (317)
|.+.++.+.+ +|+|.|-+.-. .+.+.+..+++.+++.. +.|+++-++.. -+++.+.++.
T Consensus 113 ~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~-~~pv~vk~~~~-------~~~~~~~a~~ 184 (311)
T 1ep3_A 113 YVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVS-KVPLYVKLSPN-------VTDIVPIAKA 184 (311)
T ss_dssp HHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHC-SSCEEEEECSC-------SSCSHHHHHH
T ss_pred HHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhc-CCCEEEEECCC-------hHHHHHHHHH
Confidence 5555666666 89998855311 24555677777787763 58998876421 1345566666
Q ss_pred hhcCCCceEEEEcC----------C-------------Chh---hhHHHHHHHHhhCCCcEEEEeCCCC
Q 021144 237 ADSCEQVVAVGINC----------T-------------SPR---FIHGLILSVRKVTSKPVIIYPNSGE 279 (317)
Q Consensus 237 ~~~~~~~~aiGvNC----------~-------------~p~---~~~~~l~~l~~~~~~pl~vyPNaG~ 279 (317)
+.+ .++++|-+-. + ++. ....+++.+++..+.|++ .++|-
T Consensus 185 l~~-~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~~~ipvi--a~GGI 250 (311)
T 1ep3_A 185 VEA-AGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDVDIPII--GMGGV 250 (311)
T ss_dssp HHH-TTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTCSSCEE--ECSSC
T ss_pred HHH-cCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHhcCCCEE--EECCc
Confidence 655 4788877721 1 111 124677788887788865 46663
No 231
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=57.91 E-value=69 Score=29.01 Aligned_cols=95 Identities=4% Similarity=-0.035 Sum_probs=57.7
Q ss_pred HHHHHhCCCCEEEeccCCC---------------HHHHHHHHHHHHHhCCCccEEEEE----EEcCCCcccCCCcHHHH-
Q 021144 174 VLILANSGADLIAFETIPN---------------KLEAKAYAELLEEEGITIPAWFSF----NSKDGINVVSGDSILEC- 233 (317)
Q Consensus 174 i~~l~~~gvD~l~~ET~p~---------------~~Ea~a~~~~~~~~~~~~pv~iSf----~~~~~~~l~~G~~l~~a- 233 (317)
++...++|+|.|-+=.-.+ ++.++.+++.+++.+ +.|-+.+ .+++.++ .+++.+
T Consensus 87 i~~a~~~g~~~v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G--~~v~~~i~~~~~~~~~~~----~~~~~~~ 160 (307)
T 1ydo_A 87 LENALEGGINEACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKAN--LTTRAYLSTVFGCPYEKD----VPIEQVI 160 (307)
T ss_dssp HHHHHHHTCSEEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTT--CEEEEEEECTTCBTTTBC----CCHHHHH
T ss_pred HHHHHhCCcCEEEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCC--CEEEEEEEEEecCCcCCC----CCHHHHH
Confidence 5555667999886533222 245567778888876 4444333 2343333 344444
Q ss_pred --HHHhhcCCCceEEEEc----CCChhhhHHHHHHHHhhC-CCcEEEEe
Q 021144 234 --ASIADSCEQVVAVGIN----CTSPRFIHGLILSVRKVT-SKPVIIYP 275 (317)
Q Consensus 234 --~~~~~~~~~~~aiGvN----C~~p~~~~~~l~~l~~~~-~~pl~vyP 275 (317)
++.+.+ .+++.|.+- ...|..+..+++.+++.. +.||.+..
T Consensus 161 ~~~~~~~~-~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~l~~H~ 208 (307)
T 1ydo_A 161 RLSEALFE-FGISELSLGDTIGAANPAQVETVLEALLARFPANQIALHF 208 (307)
T ss_dssp HHHHHHHH-HTCSCEEEECSSCCCCHHHHHHHHHHHHTTSCGGGEEEEC
T ss_pred HHHHHHHh-cCCCEEEEcCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEE
Confidence 444433 356655554 235999999999998876 47888877
No 232
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=57.88 E-value=56 Score=28.78 Aligned_cols=91 Identities=13% Similarity=0.064 Sum_probs=54.2
Q ss_pred HHHHHHHHhCCCCEEEeccCCC----------------------HHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCC
Q 021144 171 RRRVLILANSGADLIAFETIPN----------------------KLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGD 228 (317)
Q Consensus 171 ~~qi~~l~~~gvD~l~~ET~p~----------------------~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~ 228 (317)
.+.++.|.++|+|.|-+-+-.+ +.....+++.+++...++|+.+ ++.. +.-...|
T Consensus 34 ~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pv~l-m~y~-n~v~~~g- 110 (268)
T 1qop_A 34 LKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPIGL-LMYA-NLVFNNG- 110 (268)
T ss_dssp HHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSCEEE-EECH-HHHHTTC-
T ss_pred HHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEE-EEcc-cHHHHhh-
Confidence 4567889999999998876222 2223345666777634689776 3211 1112122
Q ss_pred cHHHHHHHhhcCCCceEEEEcCCChhhhHHHHHHHHhh
Q 021144 229 SILECASIADSCEQVVAVGINCTSPRFIHGLILSVRKV 266 (317)
Q Consensus 229 ~l~~a~~~~~~~~~~~aiGvNC~~p~~~~~~l~~l~~~ 266 (317)
++..++.+.+ .+++++-+....++.+..+++.++++
T Consensus 111 -~~~~~~~~~~-aGadgii~~d~~~e~~~~~~~~~~~~ 146 (268)
T 1qop_A 111 -IDAFYARCEQ-VGVDSVLVADVPVEESAPFRQAALRH 146 (268)
T ss_dssp -HHHHHHHHHH-HTCCEEEETTCCGGGCHHHHHHHHHT
T ss_pred -HHHHHHHHHH-cCCCEEEEcCCCHHHHHHHHHHHHHc
Confidence 2445555544 36777777777666777777777664
No 233
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=57.86 E-value=1.1e+02 Score=27.59 Aligned_cols=149 Identities=17% Similarity=0.071 Sum_probs=83.2
Q ss_pred ChHHHHHHHHHHHHhhcccccc-ccccccHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCC
Q 021144 53 SPHLVRKVHLDYLDAGANIIIT-ASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (317)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~T-nTy~as~~~l~~~g~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (317)
+.+.+++.-+.++++|.+-|.. -|-+=. .-++.+|-.++++.+++.+. +
T Consensus 35 D~~~l~~lv~~li~~Gv~gl~v~GttGE~------~~Ls~~Er~~v~~~~~~~~~------------------------g 84 (304)
T 3cpr_A 35 DIAAGREVAAYLVDKGLDSLVLAGTTGES------PTTTAAEKLELLKAVREEVG------------------------D 84 (304)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSTTTTT------TTSCHHHHHHHHHHHHHHHT------------------------T
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCh------hhCCHHHHHHHHHHHHHHhC------------------------C
Confidence 4567888888889999995543 332211 13466666777777665542 2
Q ss_pred CCeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEeccC----CCHHHHHHHHHHHHHhC
Q 021144 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI----PNKLEAKAYAELLEEEG 207 (317)
Q Consensus 132 ~~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~ET~----p~~~Ea~a~~~~~~~~~ 207 (317)
+-+.|+| +|. .+.++..+ +++...+.|+|.+++=+= |+.+++..-.+.+.+..
T Consensus 85 rvpviaG-vg~------------------~st~~ai~----la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~ 141 (304)
T 3cpr_A 85 RAKLIAG-VGT------------------NNTRTSVE----LAEAAASAGADGLLVVTPYYSKPSQEGLLAHFGAIAAAT 141 (304)
T ss_dssp TSEEEEE-CCC------------------SCHHHHHH----HHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC
T ss_pred CCcEEec-CCC------------------CCHHHHHH----HHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc
Confidence 3346676 332 14444443 455667789999977542 46677666666555543
Q ss_pred CCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcC--CChhhhHHHHH
Q 021144 208 ITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINC--TSPRFIHGLIL 261 (317)
Q Consensus 208 ~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC--~~p~~~~~~l~ 261 (317)
++|+++== + .+++--.-+++...+.+ +.++ .+||-- .....+..+++
T Consensus 142 -~lPiilYn-~--P~~tg~~l~~~~~~~La-~~pn--IvgiKdssgd~~~~~~~~~ 190 (304)
T 3cpr_A 142 -EVPICLYD-I--PGRSGIPIESDTMRRLS-ELPT--ILAVXDAKGDLVAATSLIK 190 (304)
T ss_dssp -CSCEEEEE-C--HHHHSSCCCHHHHHHHT-TSTT--EEEEEECSCCHHHHHHHHH
T ss_pred -CCCEEEEe-C--ccccCcCCCHHHHHHHH-cCCC--EEEEecCCCCHHHHHHHHH
Confidence 59988421 1 12221223455444444 3344 555543 34455555544
No 234
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=57.85 E-value=92 Score=26.85 Aligned_cols=134 Identities=13% Similarity=0.022 Sum_probs=68.7
Q ss_pred HHHHHHHHHHHHHHhCCCCEEEeccCC--------CHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHH
Q 021144 165 TLKEFHRRRVLILANSGADLIAFETIP--------NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASI 236 (317)
Q Consensus 165 el~~~h~~qi~~l~~~gvD~l~~ET~p--------~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~ 236 (317)
.+.+..++.++...+.||. |++|+++ +..++..+ +++.+ .| .+.+.++-......|.++.+.++.
T Consensus 129 ~~~~~l~~l~~~a~~~Gv~-l~lEn~~~~~~~~~~~~~~~~~l---~~~v~--~~-~vg~~~D~~h~~~~g~d~~~~l~~ 201 (294)
T 3vni_A 129 RSVESVREVAKVAEACGVD-FCLEVLNRFENYLINTAQEGVDF---VKQVD--HN-NVKVMLDTFHMNIEEDSIGGAIRT 201 (294)
T ss_dssp HHHHHHHHHHHHHHHTTCE-EEEECCCTTTCSSCCSHHHHHHH---HHHHC--CT-TEEEEEEHHHHHHHCSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCE-EEEEecCcccCcccCCHHHHHHH---HHHcC--CC-CEEEEEEhhhhHHcCCCHHHHHHH
Confidence 3444444445555567886 6679874 45555554 44443 23 133434332233467788888877
Q ss_pred hhcCCCceEEEEcCC-------ChhhhHHHHHHHHhhC-CCcEEEEeCCCCc--cccccccccccCCCChh-----hHHH
Q 021144 237 ADSCEQVVAVGINCT-------SPRFIHGLILSVRKVT-SKPVIIYPNSGET--YNAELKKWVVSFSLHFF-----PLEL 301 (317)
Q Consensus 237 ~~~~~~~~aiGvNC~-------~p~~~~~~l~~l~~~~-~~pl~vyPNaG~~--~d~~~~~w~~~~~~~~~-----~~~~ 301 (317)
+.. .+..|=++=. +.-....+++.+++.- +.|+++-+..-.. .......|.. ...+|+ +++.
T Consensus 202 ~~~--~i~~vHl~D~~r~~pG~G~id~~~~~~~L~~~gy~g~~~lE~~~~~~~~~~~~~~~wr~-~~~~~~~~~~~~~~~ 278 (294)
T 3vni_A 202 AGS--YLGHLHTGECNRKVPGRGRIPWVEIGEALADIGYNGSVVMEPFVRMGGTVGSNIKVWRD-ISNGADEKMLDREAQ 278 (294)
T ss_dssp HGG--GEEEEEECCTTSCCTTSSSCCHHHHHHHHHHTTCCSCEEECCCCCCCHHHHHHHTCCSC-TTCSCCHHHHHHHHH
T ss_pred hhh--hEeEEEeCCCCCCCCCCCCcCHHHHHHHHHHhCCCCcEEEEeccCCCccccchhhhhhc-ccCCcchhhHHHHHH
Confidence 642 2333333321 1123567777777643 5688877655321 1112346752 223455 5655
Q ss_pred HHHHHHH
Q 021144 302 ILNPFAS 308 (317)
Q Consensus 302 ~~~~w~~ 308 (317)
..-++++
T Consensus 279 ~~~~~l~ 285 (294)
T 3vni_A 279 AALDFSR 285 (294)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5554443
No 235
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=57.74 E-value=1.1e+02 Score=27.47 Aligned_cols=93 Identities=13% Similarity=0.133 Sum_probs=54.4
Q ss_pred HHHHHhCCCCEEEeccCC--------CHHHHHHHHHHHHHh----CCCccEEEEEEEcCCCccc-CCC----cHHHHHHH
Q 021144 174 VLILANSGADLIAFETIP--------NKLEAKAYAELLEEE----GITIPAWFSFNSKDGINVV-SGD----SILECASI 236 (317)
Q Consensus 174 i~~l~~~gvD~l~~ET~p--------~~~Ea~a~~~~~~~~----~~~~pv~iSf~~~~~~~l~-~G~----~l~~a~~~ 236 (317)
++.|.++|++.+-+|--. +.+|+..-++++++. + .|+.|.-.. +..+. .|. .++++++.
T Consensus 98 v~~l~~aGaagv~iED~~~~~~k~l~~~~e~~~~I~aa~~a~~~~g--~~~~i~aRt--da~~~~~g~~~~~~~~~ai~R 173 (275)
T 2ze3_A 98 VEHFAALGVAGVNLEDATGLTPTELYDLDSQLRRIEAARAAIDASG--VPVFLNART--DTFLKGHGATDEERLAETVRR 173 (275)
T ss_dssp HHHHHHTTCSEEEEECBCSSSSSCBCCHHHHHHHHHHHHHHHHHHT--SCCEEEEEC--CTTTTTCSSSHHHHHHHHHHH
T ss_pred HHHHHHcCCcEEEECCCcCCCCCccCCHHHHHHHHHHHHHhHhhcC--CCeEEEEec--hhhhccccccchhhHHHHHHH
Confidence 556777999999999754 344554444444433 5 676655543 22221 122 46666655
Q ss_pred hhc--CCCceEEEEcCCC-hhhhHHHHHHHHhhCCCcEEEE
Q 021144 237 ADS--CEQVVAVGINCTS-PRFIHGLILSVRKVTSKPVIIY 274 (317)
Q Consensus 237 ~~~--~~~~~aiGvNC~~-p~~~~~~l~~l~~~~~~pl~vy 274 (317)
+.. ..++++|=+-|.. ++.+..+ .+..+.|+.+-
T Consensus 174 a~ay~eAGAd~i~~e~~~~~~~~~~i----~~~~~~P~n~~ 210 (275)
T 2ze3_A 174 GQAYADAGADGIFVPLALQSQDIRAL----ADALRVPLNVM 210 (275)
T ss_dssp HHHHHHTTCSEEECTTCCCHHHHHHH----HHHCSSCEEEE
T ss_pred HHHHHHCCCCEEEECCCCCHHHHHHH----HHhcCCCEEEe
Confidence 431 2588999999973 4554444 44456887443
No 236
>1ur1_A Endoxylanase; hydrolase, family 10, glycoside hydrolase, hemicellulose, xylan degradation; HET: XYS AHR; 1.43A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uqy_A* 1uqz_A* 1ur2_A* 2cnc_A*
Probab=57.30 E-value=23 Score=33.28 Aligned_cols=50 Identities=14% Similarity=0.189 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHhCC--CCEEEec-----cCCCHHHHHHHHHHHHHhCCCccEEEE-EEEc
Q 021144 168 EFHRRRVLILANSG--ADLIAFE-----TIPNKLEAKAYAELLEEEGITIPAWFS-FNSK 219 (317)
Q Consensus 168 ~~h~~qi~~l~~~g--vD~l~~E-----T~p~~~Ea~a~~~~~~~~~~~~pv~iS-f~~~ 219 (317)
+.+..+++.|.+.| +|.|-+. ..|+..+++.+++.+...+ +|++|| +.+.
T Consensus 209 ~~~~~~v~~l~~~g~~iDgiG~Q~H~~~~~p~~~~i~~~l~~~a~~G--l~i~iTElDi~ 266 (378)
T 1ur1_A 209 EATVEMIERLQKRGMPIHGLGIQGHLGIDTPPIAEIEKSIIAFAKLG--LRVHFTSLDVD 266 (378)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEEESSCSCHHHHHHHHHHHHTTT--CEEEEEEEEEE
T ss_pred HHHHHHHHHHHHCCCCcceEEecCcCCCCCCCHHHHHHHHHHHHhcC--CeEEEEecccC
Confidence 34556788888778 5999986 4588999999999888776 999998 5443
No 237
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=57.03 E-value=88 Score=29.04 Aligned_cols=87 Identities=11% Similarity=0.087 Sum_probs=58.0
Q ss_pred HHHHHH-hCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCC
Q 021144 173 RVLILA-NSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCT 251 (317)
Q Consensus 173 qi~~l~-~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~ 251 (317)
.+.++. ..|+.+|. ...+.++....++.+++.+ .+|+.+.+.+.+ .+.++.+.+ .+++.|=||+.
T Consensus 61 lA~avA~~GGlgii~--~~~s~e~~~~~I~~vk~~~-~~pvga~ig~~~----------~e~a~~l~e-aGad~I~ld~a 126 (361)
T 3khj_A 61 MAVGMARLGGIGIIH--KNMDMESQVNEVLKVKNSG-GLRVGAAIGVNE----------IERAKLLVE-AGVDVIVLDSA 126 (361)
T ss_dssp HHHHHHHTTCEEEEC--SSSCHHHHHHHHHHHHHTT-CCCCEEEECTTC----------HHHHHHHHH-TTCSEEEECCS
T ss_pred HHHHHHHcCCCeEEe--cCCCHHHHHHHHHHHHhcc-CceEEEEeCCCH----------HHHHHHHHH-cCcCeEEEeCC
Confidence 344454 45666653 4557888887787787765 689888874321 344444443 47889989987
Q ss_pred C--hhhhHHHHHHHHhhCCCcEEE
Q 021144 252 S--PRFIHGLILSVRKVTSKPVII 273 (317)
Q Consensus 252 ~--p~~~~~~l~~l~~~~~~pl~v 273 (317)
+ +..+...++.+++..+.|+++
T Consensus 127 ~G~~~~~~~~i~~i~~~~~~~Viv 150 (361)
T 3khj_A 127 HGHSLNIIRTLKEIKSKMNIDVIV 150 (361)
T ss_dssp CCSBHHHHHHHHHHHHHCCCEEEE
T ss_pred CCCcHHHHHHHHHHHHhcCCcEEE
Confidence 3 667777888888776778776
No 238
>2o0t_A Diaminopimelate decarboxylase; PLP binding enzyme, lysine biosynthesis, STRU genomics, TB structural genomics consortium, TBSGC; HET: LLP; 2.33A {Mycobacterium tuberculosis} PDB: 1hkv_A* 1hkw_A
Probab=56.81 E-value=85 Score=29.92 Aligned_cols=70 Identities=14% Similarity=0.160 Sum_probs=42.9
Q ss_pred hCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcC-----------CCcccCCCc-----HHHHHHHhhcCCC
Q 021144 179 NSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKD-----------GINVVSGDS-----ILECASIADSCEQ 242 (317)
Q Consensus 179 ~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~-----------~~~l~~G~~-----l~~a~~~~~~~~~ 242 (317)
+.|++.+. +-+..|++.+.+.+++.+...+|++-+...- ....+-|.+ +.++++.+.+..+
T Consensus 130 ~~gv~~i~---vds~~el~~l~~~a~~~~~~~~v~lrvn~g~~~~~~~~~~~~~~~srfG~~~~~~e~~~~~~~~~~~~~ 206 (467)
T 2o0t_A 130 KAGVGHIV---VDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVRRVFATDH 206 (467)
T ss_dssp HHTCSEEE---ECSHHHHHHHHHHHHHHTCCEEEEEEEECSEEEEETEEEEESSCCSSSSEETTTTHHHHHHHHHHHCSS
T ss_pred HCCCCEEE---ECCHHHHHHHHHHHHhhCCCCeEEEEEcCCCCCCCCcccccCCCCCCcCCcCCHHHHHHHHHHHHhCCC
Confidence 45787664 4578888888887777664466777665420 002234554 3445555554457
Q ss_pred ceEEEEcCC
Q 021144 243 VVAVGINCT 251 (317)
Q Consensus 243 ~~aiGvNC~ 251 (317)
+...|+-|-
T Consensus 207 l~l~Gl~~H 215 (467)
T 2o0t_A 207 LRLVGLHSH 215 (467)
T ss_dssp EEEEEEECC
T ss_pred CCEEEEEEE
Confidence 778888874
No 239
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=56.78 E-value=1.2e+02 Score=27.96 Aligned_cols=112 Identities=12% Similarity=0.086 Sum_probs=64.7
Q ss_pred CCHHH---HHHHHHHHHHHHHhCCCCEEEeccC----------CC---------------HHHHHHHHHHHHHhCCCccE
Q 021144 161 VSLET---LKEFHRRRVLILANSGADLIAFETI----------PN---------------KLEAKAYAELLEEEGITIPA 212 (317)
Q Consensus 161 ~s~~e---l~~~h~~qi~~l~~~gvD~l~~ET~----------p~---------------~~Ea~a~~~~~~~~~~~~pv 212 (317)
++.+| +.+.|.+.++...++|.|.|=+--- |. .+-+..+++++++.-.+.||
T Consensus 151 mt~~eI~~~i~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v 230 (364)
T 1vyr_A 151 LELDEIPGIVNDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRI 230 (364)
T ss_dssp CCGGGHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcE
Confidence 55444 5566777777778899999855210 11 11244556677765322388
Q ss_pred EEEEEEcCCCc-c-cCCCcHHHH---HHHhhcCCCceEEEEcCCC----hhhhHHHHHHHHhhCCCcEEE
Q 021144 213 WFSFNSKDGIN-V-VSGDSILEC---ASIADSCEQVVAVGINCTS----PRFIHGLILSVRKVTSKPVII 273 (317)
Q Consensus 213 ~iSf~~~~~~~-l-~~G~~l~~a---~~~~~~~~~~~aiGvNC~~----p~~~~~~l~~l~~~~~~pl~v 273 (317)
.+-++..+... + .++.+++++ ++.+.+ .+++.|-+-+.. |..-...++.+++..+.|+++
T Consensus 231 ~vrls~~~~~~~~~~~~~~~~~~~~~a~~l~~-~G~d~i~v~~~~~~~~~~~~~~~~~~v~~~~~iPvi~ 299 (364)
T 1vyr_A 231 GIRVSPIGTFQNVDNGPNEEADALYLIEELAK-RGIAYLHMSETDLAGGKPYSEAFRQKVRERFHGVIIG 299 (364)
T ss_dssp EEEECCSSCBTTBCCCTTHHHHHHHHHHHHHH-TTCSEEEEECCBTTBCCCCCHHHHHHHHHHCCSEEEE
T ss_pred EEEEccccccccccCCCCCHHHHHHHHHHHHH-hCCCEEEEecCcccCCCcccHHHHHHHHHHCCCCEEE
Confidence 88776643211 1 235566665 444444 578888776631 222235677888888888654
No 240
>1fr2_A Colicin E9 immunity protein; protein-protein complex, zinc containing enzyme, HNH-motif, immune system; 1.60A {Escherichia coli} SCOP: a.28.2.1 PDB: 1e0h_A 1emv_A 1imp_A 1imq_A 2k5x_A 2vln_A 2vlp_A 2vlq_A 2vlo_A 2gzf_A 2gzg_A 2gzi_A 2gyk_A 2gzj_A 2gze_A 1bxi_A 3gkl_C 3gjn_A
Probab=56.69 E-value=7.4 Score=29.02 Aligned_cols=51 Identities=16% Similarity=0.236 Sum_probs=33.8
Q ss_pred cCCChhhhHHHHHHHHhhCCCc----EEEEeCCCCccccccccccccCCCChhhHHHHHHHHHH-cccc
Q 021144 249 NCTSPRFIHGLILSVRKVTSKP----VIIYPNSGETYNAELKKWVVSFSLHFFPLELILNPFAS-CRLI 312 (317)
Q Consensus 249 NC~~p~~~~~~l~~l~~~~~~p----l~vyPNaG~~~d~~~~~w~~~~~~~~~~~~~~~~~w~~-~~~~ 312 (317)
++..-+....+|..+.+.+.-| ||.||+.+. +.+|+.....+++|.. +|.=
T Consensus 26 ~~~~e~e~d~ll~~f~~~teHP~gSDLIfyP~~~~-------------e~spE~Iv~~ik~wRa~~G~p 81 (86)
T 1fr2_A 26 DTSSEEELVKLVTHFAEMTEHPSGSDLIYYPKEGD-------------DDSPSGIVNTVKQWRAANGKS 81 (86)
T ss_dssp CSSSHHHHHHHHHHHHHHHCCTTTTHHHHSCCTTC-------------CCSHHHHHHHHHHHHHHTTCC
T ss_pred CCCChHHHHHHHHHHHHhcCCCCcCceeecCCCCC-------------CCCHHHHHHHHHHHHHHcCCc
Confidence 3333344466777777665444 777777642 3689999999999984 4543
No 241
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=56.64 E-value=29 Score=30.13 Aligned_cols=34 Identities=26% Similarity=0.315 Sum_probs=26.1
Q ss_pred HHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhC
Q 021144 174 VLILANSGADLIAFETIPNKLEAKAYAELLEEEG 207 (317)
Q Consensus 174 i~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~ 207 (317)
++.+.+.|+|++-+=......-++++++.+++.+
T Consensus 84 ~~~~~~~gad~vtvh~~~G~~~l~~~~~~~~~~g 117 (228)
T 3m47_A 84 CRATFKAGADAIIVHGFPGADSVRACLNVAEEMG 117 (228)
T ss_dssp HHHHHHTTCSEEEEESTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCCCEEEEeccCCHHHHHHHHHHHHhcC
Confidence 4456668999998876666666888888888766
No 242
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=56.62 E-value=1.2e+02 Score=27.64 Aligned_cols=105 Identities=13% Similarity=0.076 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHHhCC--CCEE--EeccCC----------CHHHH----HHHHHHHHHhC--CCccEEEEEEEcCCCccc
Q 021144 166 LKEFHRRRVLILANSG--ADLI--AFETIP----------NKLEA----KAYAELLEEEG--ITIPAWFSFNSKDGINVV 225 (317)
Q Consensus 166 l~~~h~~qi~~l~~~g--vD~l--~~ET~p----------~~~Ea----~a~~~~~~~~~--~~~pv~iSf~~~~~~~l~ 225 (317)
+++|-+..++.|.+.| ||++ .-|+.. +...+ +++.+++|+.. ++.++++.+ ..
T Consensus 110 ~~~yt~~v~~~l~~~g~~v~~v~vGNE~~~G~lwp~g~~~~~~~l~~~~~~a~~avr~~~~~p~~~v~~h~--~~----- 182 (334)
T 1fob_A 110 LYNYTLEVCNTFAENDIDIEIISIGNEIRAGLLWPLGETSSYSNIGALLHSGAWGVKDSNLATTPKIMIHL--DD----- 182 (334)
T ss_dssp HHHHHHHHHHHHHHTTCCCSEEEESSSGGGCSSBTTTSTTCHHHHHHHHHHHHHHHHTSCCSSCCEEEEEE--SC-----
T ss_pred HHHHHHHHHHHHHhCCCCCCEEEEeecCcccccCCCCcchhHHHHHHHHHHHHHHHHHhccCCCCeEEEEc--CC-----
Confidence 3444456677777766 5665 235332 12332 34456677765 555665544 22
Q ss_pred CCCcH---HHHHHHhhcCC-----CceEEEEcCC---C----hhhhHHHHHHHHhhCCCcEEEEeCCC
Q 021144 226 SGDSI---LECASIADSCE-----QVVAVGINCT---S----PRFIHGLILSVRKVTSKPVIIYPNSG 278 (317)
Q Consensus 226 ~G~~l---~~a~~~~~~~~-----~~~aiGvNC~---~----p~~~~~~l~~l~~~~~~pl~vyPNaG 278 (317)
|... ..-...+.... ..|.||+|+= + ++.+...|+.+.+..++|++|-=++-
T Consensus 183 -~~~~~~~~~~~~~~~~~g~~~~~~~DvIG~syYp~w~~~~~~~~l~~~l~~~~~rygKpv~itEtG~ 249 (334)
T 1fob_A 183 -GWSWDQQNYFYETVLATGELLSTDFDYFGVSYYPFYSASATLASLKTSLANLQSTYDKPVVVVETNW 249 (334)
T ss_dssp -TTCHHHHHHHHHHHHHTSSSCGGGCCEEEEECCSSSCTTCCHHHHHHHHHHHHHHHCCCEEEEECCC
T ss_pred -cCchHHHHHHHHHHHHcCCCCCCCcCEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHCCCEEEEEccc
Confidence 1111 11112222211 4799999983 2 45566667777665689998765553
No 243
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=56.48 E-value=62 Score=28.43 Aligned_cols=91 Identities=12% Similarity=0.088 Sum_probs=54.3
Q ss_pred HHHHHHHHhCCCCEEEeccCCC----------------------HHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCC
Q 021144 171 RRRVLILANSGADLIAFETIPN----------------------KLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGD 228 (317)
Q Consensus 171 ~~qi~~l~~~gvD~l~~ET~p~----------------------~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~ 228 (317)
.+.++.|.++|||.|-+-+=.+ ++....+++.+++..+++|+.+ ++..+ .....|
T Consensus 34 ~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pi~~-m~y~n-~v~~~g- 110 (262)
T 2ekc_A 34 LKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIPFLL-MTYYN-PIFRIG- 110 (262)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEE-ECCHH-HHHHHC-
T ss_pred HHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCEEE-EecCc-HHHHhh-
Confidence 4467889999999998865222 1222334555666522589877 31111 111112
Q ss_pred cHHHHHHHhhcCCCceEEEEcCCChhhhHHHHHHHHhh
Q 021144 229 SILECASIADSCEQVVAVGINCTSPRFIHGLILSVRKV 266 (317)
Q Consensus 229 ~l~~a~~~~~~~~~~~aiGvNC~~p~~~~~~l~~l~~~ 266 (317)
++..++.+.+ .+++++-+.+..++.+..+++.++++
T Consensus 111 -~~~f~~~~~~-aG~dgvii~dl~~ee~~~~~~~~~~~ 146 (262)
T 2ekc_A 111 -LEKFCRLSRE-KGIDGFIVPDLPPEEAEELKAVMKKY 146 (262)
T ss_dssp -HHHHHHHHHH-TTCCEEECTTCCHHHHHHHHHHHHHT
T ss_pred -HHHHHHHHHH-cCCCEEEECCCCHHHHHHHHHHHHHc
Confidence 2445555554 47888888887777777777777664
No 244
>1r85_A Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 1hiz_A* 1r87_A* 3mmd_A* 1r86_A
Probab=56.23 E-value=24 Score=33.15 Aligned_cols=50 Identities=16% Similarity=0.220 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHhCCC--CEEEecc-----CCCHHHHHHHHHHHHHhCCCccEEEE-EEEc
Q 021144 168 EFHRRRVLILANSGA--DLIAFET-----IPNKLEAKAYAELLEEEGITIPAWFS-FNSK 219 (317)
Q Consensus 168 ~~h~~qi~~l~~~gv--D~l~~ET-----~p~~~Ea~a~~~~~~~~~~~~pv~iS-f~~~ 219 (317)
+.+..+++.|.+.|+ |.|-+.. .|+..+++..++.+...+ +||||| +.+.
T Consensus 212 ~~~~~~v~~l~~~g~piDgIG~Q~H~~~~~p~~~~~~~~l~~~a~lG--lpI~iTElDi~ 269 (379)
T 1r85_A 212 TALYNLVKQLKEEGVPIDGIGHQSHIQIGWPSEAEIEKTINMFAALG--LDNQITELDVS 269 (379)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEECSSSSCHHHHHHHHHHHHHTT--CEEEEEEEEEC
T ss_pred HHHHHHHHHHHHCCCceeEEEEeEEecCCCCCHHHHHHHHHHHHhcC--CeEEEeecccc
Confidence 445567888888885 9998853 478899999999888876 999998 5554
No 245
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=55.86 E-value=13 Score=33.77 Aligned_cols=41 Identities=24% Similarity=0.271 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEE
Q 021144 167 KEFHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAW 213 (317)
Q Consensus 167 ~~~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~ 213 (317)
.+.-.++++++.++|+|.|++|-+|. ++++.+.+ +. ++|++
T Consensus 178 a~~~i~rA~a~~eAGA~~ivlE~vp~-~~a~~it~---~l--~iP~i 218 (281)
T 1oy0_A 178 AEQTIADAIAVAEAGAFAVVMEMVPA-ELATQITG---KL--TIPTV 218 (281)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEESCCH-HHHHHHHH---HC--SSCEE
T ss_pred HHHHHHHHHHHHHcCCcEEEEecCCH-HHHHHHHH---hC--CCCEE
Confidence 35556689999999999999999994 45554443 32 37866
No 246
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=55.36 E-value=1.3e+02 Score=27.94 Aligned_cols=135 Identities=12% Similarity=0.001 Sum_probs=76.6
Q ss_pred ChHHHHHHHHHHHHhhccccccccccccHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCC
Q 021144 53 SPHLVRKVHLDYLDAGANIIITASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSR 132 (317)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~TnTy~as~~~l~~~g~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~~~~~~~~~ 132 (317)
+++-|+ .-+++|+++|.... .+|.......+.+.++..+....+++.|++. +.
T Consensus 76 ~~~di~----~a~~~g~~~v~i~~-~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~----------------------g~ 128 (382)
T 2ztj_A 76 RLDAAK----VAVETGVQGIDLLF-GTSKYLRAPHGRDIPRIIEEAKEVIAYIREA----------------------AP 128 (382)
T ss_dssp CHHHHH----HHHHTTCSEEEEEE-CC--------CCCHHHHHHHHHHHHHHHHHH----------------------CT
T ss_pred ChhhHH----HHHHcCCCEEEEEe-ccCHHHHHHhCCCHHHHHHHHHHHHHHHHHc----------------------CC
Confidence 455554 34578999766432 2232222244677666666666666666543 11
Q ss_pred CeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEec-cC--CCHHHHHHHHHHHHHhCCC
Q 021144 133 PVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFE-TI--PNKLEAKAYAELLEEEGIT 209 (317)
Q Consensus 133 ~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~E-T~--p~~~Ea~a~~~~~~~~~~~ 209 (317)
...|..|+- +++ . .+. +++.+.++.+.+. +|.|.+= |+ -...++..+++.+++.- +
T Consensus 129 ~~~v~~~~e-------d~~----~----~~~----~~~~~~~~~~~~~-a~~i~l~DT~G~~~P~~~~~lv~~l~~~~-~ 187 (382)
T 2ztj_A 129 HVEVRFSAE-------DTF----R----SEE----QDLLAVYEAVAPY-VDRVGLADTVGVATPRQVYALVREVRRVV-G 187 (382)
T ss_dssp TSEEEEEET-------TTT----T----SCH----HHHHHHHHHHGGG-CSEEEEEETTSCCCHHHHHHHHHHHHHHH-T
T ss_pred CEEEEEEEE-------eCC----C----CCH----HHHHHHHHHHHHh-cCEEEecCCCCCCCHHHHHHHHHHHHHhc-C
Confidence 234554432 111 1 233 3566677788888 9988664 43 36888888998888741 0
Q ss_pred ccEEEEEEEcCCCcccCCCcHHHHHHHhhc
Q 021144 210 IPAWFSFNSKDGINVVSGDSILECASIADS 239 (317)
Q Consensus 210 ~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~ 239 (317)
.++-++|-+.++ .|..+..++..+..
T Consensus 188 ~~~~i~~H~Hnd----~GlAvAN~laAv~a 213 (382)
T 2ztj_A 188 PRVDIEFHGHND----TGCAIANAYEAIEA 213 (382)
T ss_dssp TTSEEEEEEBCT----TSCHHHHHHHHHHT
T ss_pred CCCeEEEEeCCC----ccHHHHHHHHHHHh
Confidence 134578877665 47777777776653
No 247
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=55.33 E-value=55 Score=29.70 Aligned_cols=79 Identities=10% Similarity=0.013 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHHhCCCCEEEecc----------CCCHHHHHHHHHHHHHh--------CCCccEEEEEEEcCCCcccC
Q 021144 165 TLKEFHRRRVLILANSGADLIAFET----------IPNKLEAKAYAELLEEE--------GITIPAWFSFNSKDGINVVS 226 (317)
Q Consensus 165 el~~~h~~qi~~l~~~gvD~l~~ET----------~p~~~Ea~a~~~~~~~~--------~~~~pv~iSf~~~~~~~l~~ 226 (317)
+..+.|.+.++.+.+ |+|.|-+-- +.+.+.+..+++++++. +.++|+++-++.. + +
T Consensus 150 ~~~~~~~~aa~~~~~-g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~----~-~ 223 (336)
T 1f76_A 150 QGKDDYLICMEKIYA-YAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPD----L-S 223 (336)
T ss_dssp GTHHHHHHHHHHHGG-GCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSC----C-C
T ss_pred ccHHHHHHHHHHHhc-cCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCC----C-C
Confidence 445556666666654 899985532 12334445566666653 2358999865321 1 1
Q ss_pred CCcHHHHHHHhhcCCCceEEEEcC
Q 021144 227 GDSILECASIADSCEQVVAVGINC 250 (317)
Q Consensus 227 G~~l~~a~~~~~~~~~~~aiGvNC 250 (317)
-+.+.+.++.+.+ .++++|-+-.
T Consensus 224 ~~~~~~~a~~l~~-~Gvd~i~vsn 246 (336)
T 1f76_A 224 EEELIQVADSLVR-HNIDGVIATN 246 (336)
T ss_dssp HHHHHHHHHHHHH-TTCSEEEECC
T ss_pred HHHHHHHHHHHHH-cCCcEEEEeC
Confidence 1123444555554 4788876643
No 248
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=55.25 E-value=1.2e+02 Score=27.34 Aligned_cols=94 Identities=7% Similarity=-0.034 Sum_probs=59.6
Q ss_pred HHHHHHhCCCCEEEeccCC-------------CHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhc
Q 021144 173 RVLILANSGADLIAFETIP-------------NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADS 239 (317)
Q Consensus 173 qi~~l~~~gvD~l~~ET~p-------------~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~ 239 (317)
-++.|.++||+.+-+|--. +.+|+..-++++++.....++.|.-..+. . ...++++++.+..
T Consensus 102 ~v~~l~~aGa~gv~iED~~~pKrcgh~~gkl~~~~e~~~~I~aa~~a~~~~~~~i~aRtda---a--~~gl~~ai~Ra~a 176 (287)
T 3b8i_A 102 TVVELERAGIAALTIEDTLLPAQFGRKSTDLICVEEGVGKIRAALEARVDPALTIIARTNA---E--LIDVDAVIQRTLA 176 (287)
T ss_dssp HHHHHHHHTCSEEEEECBCCSCCTTTCTTCBCCHHHHHHHHHHHHHHCCSTTSEEEEEEET---T--TSCHHHHHHHHHH
T ss_pred HHHHHHHhCCeEEEEcCCCCccccCCCCCCccCHHHHHHHHHHHHHcCCCCCcEEEEechh---h--hcCHHHHHHHHHH
Confidence 3556777999999999653 45677777777777654445555554433 2 2236666654421
Q ss_pred --CCCceEEEEcCCC-hhhhHHHHHHHHhhCCCcEEEEe
Q 021144 240 --CEQVVAVGINCTS-PRFIHGLILSVRKVTSKPVIIYP 275 (317)
Q Consensus 240 --~~~~~aiGvNC~~-p~~~~~~l~~l~~~~~~pl~vyP 275 (317)
..++++|=+-|.. ++. ++.+.+..+.|+++-+
T Consensus 177 y~eAGAd~i~~e~~~~~~~----~~~i~~~~~~P~ii~~ 211 (287)
T 3b8i_A 177 YQEAGADGICLVGVRDFAH----LEAIAEHLHIPLMLVT 211 (287)
T ss_dssp HHHTTCSEEEEECCCSHHH----HHHHHTTCCSCEEEEC
T ss_pred HHHcCCCEEEecCCCCHHH----HHHHHHhCCCCEEEeC
Confidence 2588999999973 344 4555555678987544
No 249
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=54.94 E-value=30 Score=36.75 Aligned_cols=67 Identities=15% Similarity=0.139 Sum_probs=44.0
Q ss_pred HHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCCChh----------------hhHHHHHHHHhh
Q 021144 203 LEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPR----------------FIHGLILSVRKV 266 (317)
Q Consensus 203 ~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~~p~----------------~~~~~l~~l~~~ 266 (317)
+++..++.|+|+++.+..+ =+.+.++++.+.+ .++++|-+|+.+|. .+..+++.+++.
T Consensus 628 ~~~~~~~~~~i~~i~~g~~-----~~~~~~~a~~~~~-~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~ 701 (1025)
T 1gte_A 628 LKADFPDNIVIASIMCSYN-----KNDWMELSRKAEA-SGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQA 701 (1025)
T ss_dssp HHHHCTTSEEEEEECCCSC-----HHHHHHHHHHHHH-TTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHH
T ss_pred HHhcCCCCCeEEEecCCCC-----HHHHHHHHHHHHh-cCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHh
Confidence 4443346899988843111 1234556666654 57899999987543 356688888888
Q ss_pred CCCcEEEEe
Q 021144 267 TSKPVIIYP 275 (317)
Q Consensus 267 ~~~pl~vyP 275 (317)
+++|+++.=
T Consensus 702 ~~~Pv~vK~ 710 (1025)
T 1gte_A 702 VQIPFFAKL 710 (1025)
T ss_dssp CSSCEEEEE
T ss_pred hCCceEEEe
Confidence 889998764
No 250
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=54.67 E-value=45 Score=34.21 Aligned_cols=98 Identities=14% Similarity=0.079 Sum_probs=63.0
Q ss_pred HHHHHhCCCCEE-EeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEc----CCCcccCCCcHHHHHHH---hhcCCCceE
Q 021144 174 VLILANSGADLI-AFETIPNKLEAKAYAELLEEEGITIPAWFSFNSK----DGINVVSGDSILECASI---ADSCEQVVA 245 (317)
Q Consensus 174 i~~l~~~gvD~l-~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~----~~~~l~~G~~l~~a~~~---~~~~~~~~a 245 (317)
++...++|+|.| +|=.+.+++.++..++.+++.+ ..+-..++.- +..+ ...+++.+++. +.+ .+++.
T Consensus 203 i~~a~~~Gvd~irIf~s~n~l~~l~~~i~~ak~~G--~~v~~~i~~~~d~~dp~r--~~~~~e~~~~~a~~l~~-~Ga~~ 277 (718)
T 3bg3_A 203 CEVAKENGMDVFRVFDSLNYLPNMLLGMEAAGSAG--GVVEAAISYTGDVADPSR--TKYSLQYYMGLAEELVR-AGTHI 277 (718)
T ss_dssp HHHHHHHTCCEEEEECSSCCHHHHHHHHHHHHTTT--SEEEEEEECCSCTTCTTC--CTTCHHHHHHHHHHHHH-HTCSE
T ss_pred HHHHHhcCcCEEEEEecHHHHHHHHHHHHHHHHcC--CeEEEEEEeeccccCCCC--CCCCHHHHHHHHHHHHH-cCCCE
Confidence 555667899997 4445667888888888888876 4433333222 1111 12355544443 333 47777
Q ss_pred EEEcCC----ChhhhHHHHHHHHhhC-CCcEEEEeC
Q 021144 246 VGINCT----SPRFIHGLILSVRKVT-SKPVIIYPN 276 (317)
Q Consensus 246 iGvNC~----~p~~~~~~l~~l~~~~-~~pl~vyPN 276 (317)
|.+-=+ .|..+..+++.+++.. +.||.+...
T Consensus 278 I~l~DT~G~~~P~~v~~lV~~lk~~~p~~~I~~H~H 313 (718)
T 3bg3_A 278 LCIKDMAGLLKPTACTMLVSSLRDRFPDLPLHIHTH 313 (718)
T ss_dssp EEEECTTSCCCHHHHHHHHHHHHHHSTTCCEEEECC
T ss_pred EEEcCcCCCcCHHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 777643 4999999999999887 688887763
No 251
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=54.20 E-value=55 Score=27.78 Aligned_cols=86 Identities=14% Similarity=0.093 Sum_probs=51.8
Q ss_pred HHHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCC
Q 021144 172 RRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCT 251 (317)
Q Consensus 172 ~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~ 251 (317)
++++...+.|+|++..-- .+ ..++++.++.+ .|+++.. .+++++.+... .+++.|++==.
T Consensus 74 d~~~~A~~~GAd~v~~~~-~d----~~v~~~~~~~g--~~~i~G~-----------~t~~e~~~A~~--~Gad~v~~fpa 133 (207)
T 2yw3_A 74 KEAEAALEAGAAFLVSPG-LL----EEVAALAQARG--VPYLPGV-----------LTPTEVERALA--LGLSALKFFPA 133 (207)
T ss_dssp HHHHHHHHHTCSEEEESS-CC----HHHHHHHHHHT--CCEEEEE-----------CSHHHHHHHHH--TTCCEEEETTT
T ss_pred HHHHHHHHcCCCEEEcCC-CC----HHHHHHHHHhC--CCEEecC-----------CCHHHHHHHHH--CCCCEEEEecC
Confidence 467777888999997542 22 24455566655 7777652 14677776655 47899998211
Q ss_pred ChhhhHHHHHHHHhhC-CCcEEEEeCCCC
Q 021144 252 SPRFIHGLILSVRKVT-SKPVIIYPNSGE 279 (317)
Q Consensus 252 ~p~~~~~~l~~l~~~~-~~pl~vyPNaG~ 279 (317)
.+-.=...|+.++... +.|++ |=+|-
T Consensus 134 ~~~gG~~~lk~l~~~~~~ipvv--aiGGI 160 (207)
T 2yw3_A 134 EPFQGVRVLRAYAEVFPEVRFL--PTGGI 160 (207)
T ss_dssp TTTTHHHHHHHHHHHCTTCEEE--EBSSC
T ss_pred ccccCHHHHHHHHhhCCCCcEE--EeCCC
Confidence 1110236677777765 56754 66664
No 252
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=53.95 E-value=48 Score=29.45 Aligned_cols=60 Identities=13% Similarity=0.292 Sum_probs=30.3
Q ss_pred CccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCCCh-------------hhhHHHHHHHHhhCCCcEEEE
Q 021144 209 TIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSP-------------RFIHGLILSVRKVTSKPVIIY 274 (317)
Q Consensus 209 ~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~~p-------------~~~~~~l~~l~~~~~~pl~vy 274 (317)
+.|+++++...+ -..+.++++.+.+..++++|=+|+.+| +.+..+++.+++..+.|+++.
T Consensus 98 ~~p~~v~l~~~~------~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~~~pv~vk 170 (311)
T 1ep3_A 98 ELPIIANVAGSE------EADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVSKVPLYVK 170 (311)
T ss_dssp TSCEEEEECCSS------HHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHCSSCEEEE
T ss_pred CCcEEEEEcCCC------HHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 467777663210 012334444443213567666665432 333566666666656676654
No 253
>1j93_A UROD, uroporphyrinogen decarboxylase; beta barrel, plastidial enzyme, crystallographic dimer, lyase; 2.30A {Nicotiana tabacum} SCOP: c.1.22.1
Probab=53.85 E-value=68 Score=29.21 Aligned_cols=23 Identities=13% Similarity=0.313 Sum_probs=18.1
Q ss_pred HHHhCCCCEEEeccCCCHHHHHH
Q 021144 176 ILANSGADLIAFETIPNKLEAKA 198 (317)
Q Consensus 176 ~l~~~gvD~l~~ET~p~~~Ea~a 198 (317)
.|.+.|+|.+.++.-.++.+++.
T Consensus 262 ~l~~~g~d~~~~d~~~d~~~~~~ 284 (353)
T 1j93_A 262 RLPLTGVDVVSLDWTVDMADGRR 284 (353)
T ss_dssp GGGGGCCSEEECCTTSCHHHHHH
T ss_pred HHHhcCCCEEEeCCCCCHHHHHH
Confidence 45678999999998778877654
No 254
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=53.54 E-value=23 Score=32.41 Aligned_cols=61 Identities=15% Similarity=0.054 Sum_probs=38.9
Q ss_pred HHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcC
Q 021144 174 VLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINC 250 (317)
Q Consensus 174 i~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC 250 (317)
++..+++|+|.|.+.+|+ +.+++.+++.+. .+.++.+|- |-++..+.+++. .++++|++-.
T Consensus 222 ~~eAl~aGaD~I~LDn~~-~~~l~~av~~i~---~~v~ieaSG----------GI~~~~i~~~a~--tGVD~isvG~ 282 (298)
T 3gnn_A 222 LRTALAHGARSVLLDNFT-LDMMRDAVRVTE---GRAVLEVSG----------GVNFDTVRAIAE--TGVDRISIGA 282 (298)
T ss_dssp HHHHHHTTCEEEEEESCC-HHHHHHHHHHHT---TSEEEEEES----------SCSTTTHHHHHH--TTCSEEECGG
T ss_pred HHHHHHcCCCEEEECCCC-HHHHHHHHHHhC---CCCeEEEEc----------CCCHHHHHHHHH--cCCCEEEECC
Confidence 344455899999999976 677777776552 234555443 344444544444 4788888866
No 255
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=53.27 E-value=75 Score=30.02 Aligned_cols=121 Identities=12% Similarity=0.134 Sum_probs=68.7
Q ss_pred HHHHHHhCCCCEEEecc--CCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcC
Q 021144 173 RVLILANSGADLIAFET--IPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINC 250 (317)
Q Consensus 173 qi~~l~~~gvD~l~~ET--~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC 250 (317)
.++.|.+-+||++=+-+ +.++. +++.+.++ ++||++|- |. .+=..+..|++.+........+.+-|
T Consensus 126 svd~l~~~~vd~~KIgS~~~~N~p----LL~~va~~--gKPViLSt-----Gm-aTl~Ei~~Ave~i~~~Gn~~iiLlhc 193 (385)
T 1vli_A 126 SADLLQSTSPSAFKIASYEINHLP----LLKYVARL--NRPMIFST-----AG-AEISDVHEAWRTIRAEGNNQIAIMHC 193 (385)
T ss_dssp HHHHHHTTCCSCEEECGGGTTCHH----HHHHHHTT--CSCEEEEC-----TT-CCHHHHHHHHHHHHTTTCCCEEEEEE
T ss_pred HHHHHHhcCCCEEEECcccccCHH----HHHHHHhc--CCeEEEEC-----CC-CCHHHHHHHHHHHHHCCCCcEEEEec
Confidence 35556666788885543 33432 23334444 49999886 21 11123445666666533346777789
Q ss_pred CC--h---hh-hHHHHHHHHhhC-CCcEEEEeCC--C-C---------------c-cccccccc--c-ccCCCChhhHHH
Q 021144 251 TS--P---RF-IHGLILSVRKVT-SKPVIIYPNS--G-E---------------T-YNAELKKW--V-VSFSLHFFPLEL 301 (317)
Q Consensus 251 ~~--p---~~-~~~~l~~l~~~~-~~pl~vyPNa--G-~---------------~-~d~~~~~w--~-~~~~~~~~~~~~ 301 (317)
+. | +. =...+..|++.+ ..|+ .||.= | . . ++. .+.| . ....++|++|.+
T Consensus 194 ~s~YPtp~~~~nL~aI~~Lk~~f~~lpV-G~SdHt~G~~~~~~AAvAlGA~iIEkHftl-dra~~G~D~~~SL~P~ef~~ 271 (385)
T 1vli_A 194 VAKYPAPPEYSNLSVIPMLAAAFPEAVI-GFSDHSEHPTEAPCAAVRLGAKLIEKHFTI-DKNLPGADHSFALNPDELKE 271 (385)
T ss_dssp CSSSSCCGGGCCTTHHHHHHHHSTTSEE-EEEECCSSSSHHHHHHHHTTCSEEEEEBCS-CTTSSCSSCTTSBCHHHHHH
T ss_pred cCCCCCChhhcCHHHHHHHHHHcCCCCE-EeCCCCCCchHHHHHHHHcCCCEEEeCCCc-cccCCCCchhhhCCHHHHHH
Confidence 63 2 22 245677888887 7888 57763 3 1 0 111 2334 1 224678999999
Q ss_pred HHHHHH
Q 021144 302 ILNPFA 307 (317)
Q Consensus 302 ~~~~w~ 307 (317)
.+....
T Consensus 272 lv~~ir 277 (385)
T 1vli_A 272 MVDGIR 277 (385)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887654
No 256
>1gxg_A Colicin E8 immunity protein; inhibitor, inhibitor protein of DNAse colicin E8, bacteriocin immunity, plasmid,; NMR {Escherichia coli} SCOP: a.28.2.1 PDB: 1gxh_A
Probab=52.77 E-value=8.6 Score=28.59 Aligned_cols=45 Identities=13% Similarity=0.114 Sum_probs=33.0
Q ss_pred hhhHHHHHHHHhhCCCc----EEEEeCCCCccccccccccccCCCChhhHHHHHHHHHH-ccc
Q 021144 254 RFIHGLILSVRKVTSKP----VIIYPNSGETYNAELKKWVVSFSLHFFPLELILNPFAS-CRL 311 (317)
Q Consensus 254 ~~~~~~l~~l~~~~~~p----l~vyPNaG~~~d~~~~~w~~~~~~~~~~~~~~~~~w~~-~~~ 311 (317)
+.+..+|..+.+.+.-| ||.||+.+. +.+|+.....+++|.. +|.
T Consensus 30 e~~d~ll~~f~~~teHP~gSDLIfyP~~~~-------------e~spE~Iv~~ik~wRa~~g~ 79 (85)
T 1gxg_A 30 KKQDDNLEHFISVTEHPSGSDLIYYPEGNN-------------DGSPEAVIKEIKEWRAANGK 79 (85)
T ss_dssp HHHHHHHHHHHHTTCCTTTTHHHHSCCTTC-------------CSSHHHHHHHHHHHHHHTTC
T ss_pred hhHHHHHHHHHHhcCCCCcCceeecCCCCC-------------CCCHHHHHHHHHHHHHHcCC
Confidence 34777888888776555 777777642 3689999999999984 444
No 257
>3uhf_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich fold, isomerase; HET: DGL; 1.83A {Campylobacter jejuni} PDB: 3uho_A* 3uhp_A
Probab=52.51 E-value=28 Score=31.32 Aligned_cols=42 Identities=17% Similarity=0.207 Sum_probs=31.7
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEe--ccCCC--HHHHHH
Q 021144 156 DYGDAVSLETLKEFHRRRVLILANSGADLIAF--ETIPN--KLEAKA 198 (317)
Q Consensus 156 ~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~--ET~p~--~~Ea~a 198 (317)
+||. -+.+++.++-.+.++.|.+.|+|+|++ -|.+. +++++.
T Consensus 62 PYG~-ks~e~i~~~~~~~~~~L~~~g~d~IVIACNTa~~~al~~lr~ 107 (274)
T 3uhf_A 62 PYGV-KDKDTIIKFCLEALDFFEQFQIDMLIIACNTASAYALDALRA 107 (274)
T ss_dssp CCTT-SCHHHHHHHHHHHHHHHTTSCCSEEEECCHHHHHHSHHHHHH
T ss_pred CCCC-CCHHHHHHHHHHHHHHHHHCCCCEEEEeCCChhHHHHHHHHH
Confidence 3443 588999999999999999999999977 45552 455544
No 258
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=52.40 E-value=60 Score=29.43 Aligned_cols=72 Identities=15% Similarity=0.104 Sum_probs=40.8
Q ss_pred HHHHHHHhCCCCEEEeccC------------CCHHH----HHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHH
Q 021144 172 RRVLILANSGADLIAFETI------------PNKLE----AKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECAS 235 (317)
Q Consensus 172 ~qi~~l~~~gvD~l~~ET~------------p~~~E----a~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~ 235 (317)
++++.+.++|+|+|++|-= .++++ +..+++++++.+++..|++. .|-+ .+.+|+-.
T Consensus 174 eeA~amA~agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpdvivLc~-----gGpI---stpeDv~~ 245 (286)
T 2p10_A 174 EDAVAMAKAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDDIIILSH-----GGPI---ANPEDARF 245 (286)
T ss_dssp HHHHHHHHHTCSEEEEECSCC---------CCCHHHHHHHHHHHHHHHHHHCSCCEEEEE-----STTC---CSHHHHHH
T ss_pred HHHHHHHHcCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhCCCcEEEec-----CCCC---CCHHHHHH
Confidence 4677788899999988732 15555 33455666766544433321 1222 34555555
Q ss_pred HhhcCCCceEEEEcCC
Q 021144 236 IADSCEQVVAVGINCT 251 (317)
Q Consensus 236 ~~~~~~~~~aiGvNC~ 251 (317)
.++...+.++++.-.+
T Consensus 246 ~l~~t~G~~G~~gASs 261 (286)
T 2p10_A 246 ILDSCQGCHGFYGASS 261 (286)
T ss_dssp HHHHCTTCCEEEESHH
T ss_pred HHhcCCCccEEEeehh
Confidence 5554345666665553
No 259
>3out_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, MURI, cell envelope; HET: MSE DGL; 1.65A {Francisella tularensis subsp}
Probab=52.15 E-value=23 Score=31.67 Aligned_cols=32 Identities=22% Similarity=0.359 Sum_probs=27.4
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEec
Q 021144 156 DYGDAVSLETLKEFHRRRVLILANSGADLIAFE 188 (317)
Q Consensus 156 ~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~E 188 (317)
+||. -+.+++.++-.+.++.|.+.|+|+|++=
T Consensus 45 PYG~-~~~~~i~~~~~~~~~~L~~~g~~~iVIA 76 (268)
T 3out_A 45 PYGT-KSRATIQKFAAQTAKFLIDQEVKAIIIA 76 (268)
T ss_dssp CCTT-SCHHHHHHHHHHHHHHHHHTTCSEEEEC
T ss_pred CCCC-CCHHHHHHHHHHHHHHHHHCCCCEEEEe
Confidence 4554 5889999999999999999999999875
No 260
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=51.57 E-value=1.8e+02 Score=29.10 Aligned_cols=113 Identities=14% Similarity=0.126 Sum_probs=67.6
Q ss_pred CCCCHHHH---HHHHHHHHHHHHhCCCCEEEec---cC-------------------CCHH-H---HHHHHHHHHHh-CC
Q 021144 159 DAVSLETL---KEFHRRRVLILANSGADLIAFE---TI-------------------PNKL-E---AKAYAELLEEE-GI 208 (317)
Q Consensus 159 ~~~s~~el---~~~h~~qi~~l~~~gvD~l~~E---T~-------------------p~~~-E---a~a~~~~~~~~-~~ 208 (317)
.+++.+|+ .+.|.+-++...++|.|.|=+= -. -+++ . +..+++++++. +.
T Consensus 144 ~~~t~~ei~~~i~~f~~aA~~a~~aGfDgVeih~a~gy~L~~qFlsp~~N~R~D~yGGs~enR~r~~~ei~~avr~~~g~ 223 (690)
T 3k30_A 144 RAMTKQDIDDLRRWHRNAVRRSIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGGSLENRMRLLRELLEDTLDECAG 223 (690)
T ss_dssp EECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTT
T ss_pred CcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccccchHHHHhCCCccCCCccccCCCHHHHHHHHHHHHHHHHHHhCC
Confidence 34676664 4567777777778999988551 11 1222 1 33455556553 44
Q ss_pred CccEEEEEEEcCCCcccCCCcHHHHHHHhhc-CCCceEEEEcCCC------------hhhhHHHHHHHHhhCCCcEEE
Q 021144 209 TIPAWFSFNSKDGINVVSGDSILECASIADS-CEQVVAVGINCTS------------PRFIHGLILSVRKVTSKPVII 273 (317)
Q Consensus 209 ~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~-~~~~~aiGvNC~~------------p~~~~~~l~~l~~~~~~pl~v 273 (317)
+.||.+-++..+. ...|.++++++..+.. ..+++++.+...+ +.....+++.+++..+.|+++
T Consensus 224 ~~~v~~r~s~~~~--~~~g~~~~~~~~~~~~l~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pvi~ 299 (690)
T 3k30_A 224 RAAVACRITVEEE--IDGGITREDIEGVLRELGELPDLWDFAMGSWEGDSVTSRFAPEGRQEEFVAGLKKLTTKPVVG 299 (690)
T ss_dssp SSEEEEEEECCCC--STTSCCHHHHHHHHHHHTTSSSEEEEECSCHHHHTCCTTTCCTTTTHHHHTTSGGGCSSCEEE
T ss_pred CceEEEEECcccc--CCCCCCHHHHHHHHHHHHhhcCEEEEecccccccCCCCccCCccccHHHHHHHHHHcCCeEEE
Confidence 6788888877543 3467777765544321 1257888887642 112246677778888889764
No 261
>2qgh_A Diaminopimelate decarboxylase; lyase; HET: PLP LYS; 2.30A {Helicobacter pylori} PDB: 3c5q_A*
Probab=51.43 E-value=1.6e+02 Score=27.55 Aligned_cols=73 Identities=12% Similarity=0.066 Sum_probs=45.5
Q ss_pred HHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCC---------C--cccCCCcHHHHHHH---hhcCC
Q 021144 176 ILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDG---------I--NVVSGDSILECASI---ADSCE 241 (317)
Q Consensus 176 ~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~---------~--~l~~G~~l~~a~~~---~~~~~ 241 (317)
.+++.|++.+. +-+..|++.+.+++++.+...+|++-+....+ + ..+-|.+.+++.+. +...+
T Consensus 119 ~a~~~gv~~i~---vds~~el~~l~~~a~~~~~~~~v~lrvn~g~~~~~~~~~~tg~~~sRfG~~~~e~~~l~~~~~~~~ 195 (425)
T 2qgh_A 119 QALKLNILFLN---VESFMELKTIETIAQSLGIKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSA 195 (425)
T ss_dssp HHHHTTCSEEE---ECSHHHHHHHHHHHHHHTCCEEEEEEBCCCCCCCSCGGGBCCSTTSSSSBCHHHHHHHHHHHHHCS
T ss_pred HHHHCCCCEEE---eCCHHHHHHHHHHHHhcCCCceEEEEEeCCCCCCCCcccccCCCCCCCcCCHHHHHHHHHHHHhCC
Confidence 34456887664 45788888888877776644567766644311 1 34568777665544 33445
Q ss_pred CceEEEEcCC
Q 021144 242 QVVAVGINCT 251 (317)
Q Consensus 242 ~~~aiGvNC~ 251 (317)
++...|+-|-
T Consensus 196 ~l~l~Gl~~H 205 (425)
T 2qgh_A 196 FLEPVSVHFH 205 (425)
T ss_dssp SEEEEEEECC
T ss_pred CccEEEEEEE
Confidence 7777787773
No 262
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=51.38 E-value=52 Score=28.99 Aligned_cols=89 Identities=13% Similarity=0.125 Sum_probs=50.7
Q ss_pred HHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCc-eEEEEcC-C
Q 021144 174 VLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQV-VAVGINC-T 251 (317)
Q Consensus 174 i~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~-~aiGvNC-~ 251 (317)
++.+.++|+|.+++=-++. +|....++.+++.+ ++.+.-+ . ..++.+.+...+....+. ..+.++- +
T Consensus 115 ~~~~~~aGadgii~~d~~~-e~~~~~~~~~~~~g--~~~i~l~--~------p~t~~~~i~~i~~~~~g~v~~~s~~G~t 183 (268)
T 1qop_A 115 YARCEQVGVDSVLVADVPV-EESAPFRQAALRHN--IAPIFIC--P------PNADDDLLRQVASYGRGYTYLLSRSGVT 183 (268)
T ss_dssp HHHHHHHTCCEEEETTCCG-GGCHHHHHHHHHTT--CEEECEE--C------TTCCHHHHHHHHHHCCSCEEEESSSSCC
T ss_pred HHHHHHcCCCEEEEcCCCH-HHHHHHHHHHHHcC--CcEEEEE--C------CCCCHHHHHHHHhhCCCcEEEEecCCcC
Confidence 5567778999888766663 57778888888876 4443211 1 224444333333322332 2334442 2
Q ss_pred C-----hhhhHHHHHHHHhhCCCcEEE
Q 021144 252 S-----PRFIHGLILSVRKVTSKPVII 273 (317)
Q Consensus 252 ~-----p~~~~~~l~~l~~~~~~pl~v 273 (317)
+ +..+...++.+++.++.|+.+
T Consensus 184 G~~~~~~~~~~~~i~~lr~~~~~pi~v 210 (268)
T 1qop_A 184 GAENRGALPLHHLIEKLKEYHAAPALQ 210 (268)
T ss_dssp CSSSCC--CCHHHHHHHHHTTCCCEEE
T ss_pred CCccCCCchHHHHHHHHHhccCCcEEE
Confidence 2 133467788888877788665
No 263
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=51.22 E-value=45 Score=25.08 Aligned_cols=114 Identities=10% Similarity=0.037 Sum_probs=56.3
Q ss_pred ccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCC--cccCCCcHH--HHHHHhhcCCCceEEEEcCCChhhhHHHHHHH
Q 021144 188 ETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGI--NVVSGDSIL--ECASIADSCEQVVAVGINCTSPRFIHGLILSV 263 (317)
Q Consensus 188 ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~--~l~~G~~l~--~a~~~~~~~~~~~aiGvNC~~p~~~~~~l~~l 263 (317)
++..+..+...++..++..+ +|+++-|.-.-=+ +... ..+. +...... ..+..+.|||...+.-..+.+.+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~--k~vlv~f~a~wC~~C~~~~-~~l~~~~~~~~~~--~~~~~~~vd~~~~~~~~~l~~~~ 84 (133)
T 3fk8_A 10 EHADAWTQVKKALAAGKRTH--KPTLLVFGANWCTDCRALD-KSLRNQKNTALIA--KHFEVVKIDVGNFDRNLELSQAY 84 (133)
T ss_dssp TTCCHHHHHHHHHHHHHHHT--CCEEEEEECTTCHHHHHHH-HHHTSHHHHHHHH--HHCEEEEEECTTTTSSHHHHHHT
T ss_pred cccChHhHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHH-HHhCCHHHHHHhc--CCEEEEEEeCCcccchHHHHHHh
Confidence 45556677777777666654 8999999632111 1000 0122 3333332 25788999995433333444444
Q ss_pred Hhh--CCCc-EEEE-eCCCCccccccccccccCCCChhhHHHHHHHH
Q 021144 264 RKV--TSKP-VIIY-PNSGETYNAELKKWVVSFSLHFFPLELILNPF 306 (317)
Q Consensus 264 ~~~--~~~p-l~vy-PNaG~~~d~~~~~w~~~~~~~~~~~~~~~~~w 306 (317)
.-. ...| ++++ +|+-..+......+......+.+++.+++.+.
T Consensus 85 ~v~~~~~~Pt~~~~d~~G~~~~~~~g~~~~~~~~~~~~~l~~~l~~l 131 (133)
T 3fk8_A 85 GDPIQDGIPAVVVVNSDGKVRYTTKGGELANARKMSDQGIYDFFAKI 131 (133)
T ss_dssp TCGGGGCSSEEEEECTTSCEEEECCSCTTTTGGGSCHHHHHHHHHHH
T ss_pred CCccCCccceEEEECCCCCEEEEecCCcccccccCCHHHHHHHHHHh
Confidence 320 4578 5566 55432222111112111224566666665554
No 264
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=51.10 E-value=60 Score=29.05 Aligned_cols=71 Identities=13% Similarity=0.044 Sum_probs=41.8
Q ss_pred HHHHHHHHHhCCCC---EEEecc-----------CCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHH
Q 021144 170 HRRRVLILANSGAD---LIAFET-----------IPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECAS 235 (317)
Q Consensus 170 h~~qi~~l~~~gvD---~l~~ET-----------~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~ 235 (317)
|.+.++.+.++|+| .|-+-- ..+.+.+..+++.+++.. ++|+++-++.. + +-..+.+.++
T Consensus 108 ~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~-~~Pv~vK~~~~----~-~~~~~~~~a~ 181 (314)
T 2e6f_A 108 NVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAY-GLPFGVKMPPY----F-DIAHFDTAAA 181 (314)
T ss_dssp HHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHH-CSCEEEEECCC----C-CHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhc-CCCEEEEECCC----C-CHHHHHHHHH
Confidence 55566677777888 665421 115566677788787753 58998876422 1 1123344455
Q ss_pred HhhcCCC-ceEEE
Q 021144 236 IADSCEQ-VVAVG 247 (317)
Q Consensus 236 ~~~~~~~-~~aiG 247 (317)
.+.+ .+ +++|-
T Consensus 182 ~~~~-aG~~d~i~ 193 (314)
T 2e6f_A 182 VLNE-FPLVKFVT 193 (314)
T ss_dssp HHHT-CTTEEEEE
T ss_pred HHHh-cCCceEEE
Confidence 5554 47 77764
No 265
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=50.97 E-value=55 Score=30.12 Aligned_cols=28 Identities=7% Similarity=-0.094 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHhhccccccccccccHH
Q 021144 55 HLVRKVHLDYLDAGANIIITASYQATIQ 82 (317)
Q Consensus 55 e~V~~iH~~Yl~AGAdiI~TnTy~as~~ 82 (317)
+...+.|.+.-+-|+-+|+|---..++.
T Consensus 37 ~~~~~~y~~rA~gg~Glii~e~~~v~~~ 64 (349)
T 3hgj_A 37 DWHLLHYPTRALGGVGLILVEATAVEPL 64 (349)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEEEESSGG
T ss_pred HHHHHHHHHHhcCCceEEEecceeeccc
Confidence 4555666666666777666544334443
No 266
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=50.96 E-value=1.6e+02 Score=27.46 Aligned_cols=47 Identities=15% Similarity=0.073 Sum_probs=28.7
Q ss_pred ChHHHHHHHHHHHHhhcccccc-ccccccHHHHHhCCCCHHHHHHHHHHHHHHH
Q 021144 53 SPHLVRKVHLDYLDAGANIIIT-ASYQATIQGFEAKGFSTEEAEALLRRSVEIA 105 (317)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~T-nTy~as~~~l~~~g~~~~~~~~l~~~av~lA 105 (317)
+.+.+++.-+.++++|++-|.. -|=+=. .-++.+|-.++++.+++.+
T Consensus 78 D~~al~~lv~~li~~Gv~Gl~v~GTTGE~------~~Ls~eEr~~vi~~~ve~~ 125 (360)
T 4dpp_A 78 DLEAYDDLVNIQIQNGAEGVIVGGTTGEG------QLMSWDEHIMLIGHTVNCF 125 (360)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSTTTTG------GGSCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEecccccCh------hhCCHHHHHHHHHHHHHHh
Confidence 3467888888889999994443 333211 1245566666776666543
No 267
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=50.91 E-value=99 Score=33.47 Aligned_cols=99 Identities=14% Similarity=0.143 Sum_probs=63.8
Q ss_pred HHHHHHhCCCCEE-EeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCC----CcHH---HHHHHhhcCCCce
Q 021144 173 RVLILANSGADLI-AFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSG----DSIL---ECASIADSCEQVV 244 (317)
Q Consensus 173 qi~~l~~~gvD~l-~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G----~~l~---~a~~~~~~~~~~~ 244 (317)
-++...++|+|.+ +|=.+.+++.++..++.+++.+ ..+-..+++. .+..|+ .+++ +.++.+.+ .+++
T Consensus 650 ~i~~a~~~g~d~irif~sl~~~~~~~~~i~~~~~~g--~~v~~~i~~~--~~~~d~~r~~~~~~~~~~~~~~~~~-~Ga~ 724 (1165)
T 2qf7_A 650 FVRQAAKGGIDLFRVFDCLNWVENMRVSMDAIAEEN--KLCEAAICYT--GDILNSARPKYDLKYYTNLAVELEK-AGAH 724 (1165)
T ss_dssp HHHHHHHHTCCEEEEECTTCCGGGGHHHHHHHHHTT--CEEEEEEECC--SCTTCTTSGGGCHHHHHHHHHHHHH-TTCS
T ss_pred HHHHHHhcCcCEEEEEeeHHHHHHHHHHHHHHHhcc--ceEEEEEEEe--ccccCCCCCCCCHHHHHHHHHHHHH-cCCC
Confidence 3555667899987 4455667888888888888876 3333333221 111122 3444 44444444 4777
Q ss_pred EEEEcCC----ChhhhHHHHHHHHhhCCCcEEEEeC
Q 021144 245 AVGINCT----SPRFIHGLILSVRKVTSKPVIIYPN 276 (317)
Q Consensus 245 aiGvNC~----~p~~~~~~l~~l~~~~~~pl~vyPN 276 (317)
.|.+-=+ .|..+..+++.+++..+.||.+...
T Consensus 725 ~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~i~~H~H 760 (1165)
T 2qf7_A 725 IIAVKDMAGLLKPAAAKVLFKALREATGLPIHFHTH 760 (1165)
T ss_dssp EEEEEETTCCCCHHHHHHHHHHHHHHCSSCEEEEEC
T ss_pred EEEEeCccCCcCHHHHHHHHHHHHHhcCCeEEEEEC
Confidence 7766533 4999999999999888888887763
No 268
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=50.84 E-value=61 Score=29.72 Aligned_cols=96 Identities=17% Similarity=0.074 Sum_probs=59.4
Q ss_pred HHHHHhCCCCEEEeccCCC---------------HHHHHHHHHHHHHhCCCccEEEEEEEcC---CCcccCCCcHHHHHH
Q 021144 174 VLILANSGADLIAFETIPN---------------KLEAKAYAELLEEEGITIPAWFSFNSKD---GINVVSGDSILECAS 235 (317)
Q Consensus 174 i~~l~~~gvD~l~~ET~p~---------------~~Ea~a~~~~~~~~~~~~pv~iSf~~~~---~~~l~~G~~l~~a~~ 235 (317)
++...++|+|.+-+=.-.+ ++.++.+++.+++.+ +.|. +++.+ .++. +=.-+.+.++
T Consensus 102 i~~a~~~g~~~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G--~~v~--~~~~~~~~~~~~-~~~~~~~~~~ 176 (337)
T 3ble_A 102 VDWIKDSGAKVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSG--LKIN--VYLEDWSNGFRN-SPDYVKSLVE 176 (337)
T ss_dssp HHHHHHHTCCEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTT--CEEE--EEEETHHHHHHH-CHHHHHHHHH
T ss_pred HHHHHHCCCCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCC--CEEE--EEEEECCCCCcC-CHHHHHHHHH
Confidence 5556668999885543222 245666777778766 5554 44443 2221 1122334555
Q ss_pred HhhcCCCceEEEEcCC----ChhhhHHHHHHHHhhC-CCcEEEEe
Q 021144 236 IADSCEQVVAVGINCT----SPRFIHGLILSVRKVT-SKPVIIYP 275 (317)
Q Consensus 236 ~~~~~~~~~aiGvNC~----~p~~~~~~l~~l~~~~-~~pl~vyP 275 (317)
.+.+ .+++.|.+-=+ .|..+..+++.+++.. +.||.+..
T Consensus 177 ~~~~-~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~p~~~i~~H~ 220 (337)
T 3ble_A 177 HLSK-EHIERIFLPDTLGVLSPEETFQGVDSLIQKYPDIHFEFHG 220 (337)
T ss_dssp HHHT-SCCSEEEEECTTCCCCHHHHHHHHHHHHHHCTTSCEEEEC
T ss_pred HHHH-cCCCEEEEecCCCCcCHHHHHHHHHHHHHhcCCCeEEEEe
Confidence 5544 57777776543 4999999999999877 67888775
No 269
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=50.31 E-value=30 Score=29.79 Aligned_cols=102 Identities=18% Similarity=0.226 Sum_probs=59.8
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEeccCCCHH----HHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHH--
Q 021144 161 VSLETLKEFHRRRVLILANSGADLIAFETIPNKL----EAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECA-- 234 (317)
Q Consensus 161 ~s~~el~~~h~~qi~~l~~~gvD~l~~ET~p~~~----Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~-- 234 (317)
++.+++.+.|++ .+..+.|++++|+-+.+. +.....+.++..+ .|+++-..... .++.++.
T Consensus 94 i~~~~i~~~~~~----~l~~~~D~vlIEgaggl~~p~~~~~~~adla~~l~--~pviLV~~~~~-------~~i~~~~~~ 160 (228)
T 3of5_A 94 ISIENLKQFIED----KYNQDLDILFIEGAGGLLTPYSDHTTQLDLIKALQ--IPVLLVSAIKV-------GCINHTLLT 160 (228)
T ss_dssp CCHHHHHHHHHG----GGGSSCSEEEEEEEEETTCBSSSSCBHHHHHHHHT--CCEEEEEECST-------THHHHHHHH
T ss_pred CCHHHHHHHHHH----HHHccCCEEEEECCCccccccccchhHHHHHHHcC--CCEEEEEcCCc-------chHHHHHHH
Confidence 456666665543 123578999999964321 2223455666655 89887554432 1244333
Q ss_pred -HHhhc-CCCceEEEEcCCChh--hhHHHHHHHHhhCCCc-EEEEe
Q 021144 235 -SIADS-CEQVVAVGINCTSPR--FIHGLILSVRKVTSKP-VIIYP 275 (317)
Q Consensus 235 -~~~~~-~~~~~aiGvNC~~p~--~~~~~l~~l~~~~~~p-l~vyP 275 (317)
+.+.. ...+.++=+|...++ +....++.+.+.++.| |++-|
T Consensus 161 ~~~l~~~~~~i~GvIlN~~~~~~~~~~~~~~~l~~~~g~pvLG~iP 206 (228)
T 3of5_A 161 INELNRHNIKLAGWIANCNDSNIKYIDEQINTIEELSGYKCSAKIS 206 (228)
T ss_dssp HHHHHHTTCCEEEEEEEECCTTCSCHHHHHHHHHHHHSCCCSEEEE
T ss_pred HHHHHhCCCcEEEEEEECcCCcchhhHHHHHHHHHhhCCCEEEECC
Confidence 22222 235677889997553 3455677777777777 57778
No 270
>1unk_A Colicin E7; immunity protein, dimeric structure, RNAse active site; 1.80A {Escherichia coli} SCOP: a.28.2.1 PDB: 1mz8_A 1ayi_A 2jaz_A 2jb0_A 2jbg_A 7cei_A 1znv_A 1cei_A 1ujz_A 2erh_A
Probab=50.23 E-value=8.2 Score=28.85 Aligned_cols=44 Identities=16% Similarity=0.187 Sum_probs=31.4
Q ss_pred hHHHHHHHHhhCCCc----EEEEeCCCCccccccccccccCCCChhhHHHHHHHHHH-cccc
Q 021144 256 IHGLILSVRKVTSKP----VIIYPNSGETYNAELKKWVVSFSLHFFPLELILNPFAS-CRLI 312 (317)
Q Consensus 256 ~~~~l~~l~~~~~~p----l~vyPNaG~~~d~~~~~w~~~~~~~~~~~~~~~~~w~~-~~~~ 312 (317)
...+|..+.+.+.-| ||.||+.|. +.+|+...+.+++|.. +|.=
T Consensus 34 ~d~lv~hF~~iteHP~gsDLIfYP~~~~-------------edsPEgIv~~iKeWRa~nG~p 82 (87)
T 1unk_A 34 LDVLLEHFVKITEHPDGTDLIYYPSDNR-------------DDSPEGIVKEIKEWRAANGKP 82 (87)
T ss_dssp HHHHHHHHHHHHCCTTTTHHHHSCCSSC-------------CCSHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHhcCCCCCCCeeeeCCCCC-------------CCCHHHHHHHHHHHHHHcCCc
Confidence 366777666666555 888887753 2579999999999984 4543
No 271
>3r79_A Uncharacterized protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium, TIM barrel; HET: PLP; 1.90A {Agrobacterium tumefaciens}
Probab=50.22 E-value=76 Score=27.82 Aligned_cols=94 Identities=17% Similarity=0.168 Sum_probs=57.2
Q ss_pred CCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHh---hcCCCceEEEEcCCC-----h
Q 021144 182 ADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIA---DSCEQVVAVGINCTS-----P 253 (317)
Q Consensus 182 vD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~---~~~~~~~aiGvNC~~-----p 253 (317)
+|+ +.|+.+++.++++-+.+++.+...+|++.+.... +..+.|.+.+++...+ ...+++...|+-|.. |
T Consensus 98 ~~~--i~sVds~~~a~~L~~~a~~~g~~~~V~LqVdtG~-e~~R~Gv~~ee~~~l~~~i~~l~~L~l~GlmTh~a~~dd~ 174 (244)
T 3r79_A 98 FDV--VESIDREKIARALSEECARQGRSLRFYVQVNTGL-EPQKAGIDPRETVAFVAFCRDELKLPVEGLMCIPPAEENP 174 (244)
T ss_dssp CSE--EEEECSHHHHHHHHHHHHHHTCCCEEEEEBCTTC-CTTSCSBCHHHHHHHHHHHHHTSCCCCCEEECCCCTTSCS
T ss_pred CCE--EEeeCCHHHHHHHHHHHHHcCCCceEEEEEECCC-CcCCCCCCHHHHHHHHHHHHcCCCCEEEEEEecCCCCCCH
Confidence 465 4899999999998888887775577777764321 1456788777665443 344566667776642 2
Q ss_pred hhhHHHHHHHHhhCCCcEEEEeCCC
Q 021144 254 RFIHGLILSVRKVTSKPVIIYPNSG 278 (317)
Q Consensus 254 ~~~~~~l~~l~~~~~~pl~vyPNaG 278 (317)
+..-..++.+++....+.+-.-+++
T Consensus 175 ~~~f~~l~~l~~~l~~~~lSmGmS~ 199 (244)
T 3r79_A 175 GPHFALLAKLAGQCGLEKLSMGMSG 199 (244)
T ss_dssp HHHHHHHHHHHHHHTCCEEECCCTT
T ss_pred HHHHHHHHHHHHhCCCCEEEeecch
Confidence 2223344444444444555555555
No 272
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=50.16 E-value=1.5e+02 Score=26.84 Aligned_cols=145 Identities=17% Similarity=0.151 Sum_probs=81.6
Q ss_pred ChHHHHHHHHHHHHhhccccccc-cccccHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCC
Q 021144 53 SPHLVRKVHLDYLDAGANIIITA-SYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (317)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~Tn-Ty~as~~~l~~~g~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (317)
+.+.+++.-+.++++|.+-|..+ |-+=. .-++.+|-.++++.+++.+. +
T Consensus 31 D~~~l~~lv~~li~~Gv~gl~v~GtTGE~------~~Ls~eEr~~vi~~~~~~~~------------------------g 80 (314)
T 3d0c_A 31 DWKGLDDNVEFLLQNGIEVIVPNGNTGEF------YALTIEEAKQVATRVTELVN------------------------G 80 (314)
T ss_dssp CHHHHHHHHHHHHHTTCSEECTTSGGGTG------GGSCHHHHHHHHHHHHHHHT------------------------T
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcccCCh------hhCCHHHHHHHHHHHHHHhC------------------------C
Confidence 45678888888899999966543 43311 13466667777777765442 2
Q ss_pred CCeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEeccC----CCHHHHHHHHHHHHHhC
Q 021144 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI----PNKLEAKAYAELLEEEG 207 (317)
Q Consensus 132 ~~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~ET~----p~~~Ea~a~~~~~~~~~ 207 (317)
+-+.|+| +|. . .++.. ++++...+.|+|.+++=+= |+-+++..-.+.+.+..
T Consensus 81 rvpViaG-vg~-s------------------t~~ai----~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~ 136 (314)
T 3d0c_A 81 RATVVAG-IGY-S------------------VDTAI----ELGKSAIDSGADCVMIHQPVHPYITDAGAVEYYRNIIEAL 136 (314)
T ss_dssp SSEEEEE-ECS-S------------------HHHHH----HHHHHHHHTTCSEEEECCCCCSCCCHHHHHHHHHHHHHHS
T ss_pred CCeEEec-CCc-C------------------HHHHH----HHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhC
Confidence 3345666 343 2 12322 3566677799999987542 46677666666555543
Q ss_pred CCccEEEEEEEcCCCcccCC-CcHHHHHHHhhcCCCceEEEEcCCChhhhHHHHH
Q 021144 208 ITIPAWFSFNSKDGINVVSG-DSILECASIADSCEQVVAVGINCTSPRFIHGLIL 261 (317)
Q Consensus 208 ~~~pv~iSf~~~~~~~l~~G-~~l~~a~~~~~~~~~~~aiGvNC~~p~~~~~~l~ 261 (317)
++|+++== +.| -+++...+.+ +.+++.+|=--|.....+..+++
T Consensus 137 -~lPiilYn--------~tg~l~~~~~~~La-~~pnIvgiKdssgd~~~~~~~~~ 181 (314)
T 3d0c_A 137 -DAPSIIYF--------KDAHLSDDVIKELA-PLDKLVGIKYAINDIQRVTQVMR 181 (314)
T ss_dssp -SSCEEEEE--------CCTTSCTHHHHHHT-TCTTEEEEEECCCCHHHHHHHHH
T ss_pred -CCCEEEEe--------CCCCcCHHHHHHHH-cCCCEEEEEeCCCCHHHHHHHHH
Confidence 59988643 233 3334344443 33444433333334445544443
No 273
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=50.01 E-value=1.5e+02 Score=26.94 Aligned_cols=93 Identities=9% Similarity=0.044 Sum_probs=58.2
Q ss_pred HHHHHHhCCCCEEEeccCC--------------CHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhh
Q 021144 173 RVLILANSGADLIAFETIP--------------NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIAD 238 (317)
Q Consensus 173 qi~~l~~~gvD~l~~ET~p--------------~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~ 238 (317)
-++.+.++||+.+-+|--. +.+|+..-++++++.+ .+++|--..+. ... ..++++++.+.
T Consensus 109 ~v~~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A~--~~~~I~ARtda--~~~--~g~~~ai~Ra~ 182 (305)
T 3ih1_A 109 TAVEMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEVA--PSLYIVARTDA--RGV--EGLDEAIERAN 182 (305)
T ss_dssp HHHHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHHC--TTSEEEEEECC--HHH--HCHHHHHHHHH
T ss_pred HHHHHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHcC--CCeEEEEeecc--ccc--cCHHHHHHHHH
Confidence 4777888999999999642 4567777777777665 56665554432 111 23566665543
Q ss_pred c--CCCceEEEEcCCC-hhhhHHHHHHHHhhCCCcEEEEe
Q 021144 239 S--CEQVVAVGINCTS-PRFIHGLILSVRKVTSKPVIIYP 275 (317)
Q Consensus 239 ~--~~~~~aiGvNC~~-p~~~~~~l~~l~~~~~~pl~vyP 275 (317)
. ..|+++|=+-|.. ++.+. .+.+..+.|+++-+
T Consensus 183 ay~eAGAD~i~~e~~~~~~~~~----~i~~~~~~P~~~n~ 218 (305)
T 3ih1_A 183 AYVKAGADAIFPEALQSEEEFR----LFNSKVNAPLLANM 218 (305)
T ss_dssp HHHHHTCSEEEETTCCSHHHHH----HHHHHSCSCBEEEC
T ss_pred HHHHcCCCEEEEcCCCCHHHHH----HHHHHcCCCEEEee
Confidence 1 2478999999973 34444 44444567876544
No 274
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=49.78 E-value=1.4e+02 Score=26.71 Aligned_cols=94 Identities=16% Similarity=0.025 Sum_probs=55.7
Q ss_pred HHHHHHhCC-CCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCC
Q 021144 173 RVLILANSG-ADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCT 251 (317)
Q Consensus 173 qi~~l~~~g-vD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~ 251 (317)
.+.+..++| +.++..+++++.+++...++.+++.. +.|+-+.+-+... + .-..+.+.++.+.+ .++++|-++..
T Consensus 31 la~av~~aGglG~i~~~~~~s~~~l~~~i~~i~~~~-~~p~~v~l~v~~~--~-~~~~~~~~~~~~~~-~g~d~V~~~~g 105 (328)
T 2gjl_A 31 MAAAVANAGGLATLSALTQPSPEALAAEIARCRELT-DRPFGVNLTLLPT--Q-KPVPYAEYRAAIIE-AGIRVVETAGN 105 (328)
T ss_dssp HHHHHHHTTSBCEEETTTSSSHHHHHHHHHHHHHHC-SSCCEEEEEECCC--S-SCCCHHHHHHHHHH-TTCCEEEEEES
T ss_pred HHHHHHHCCCeEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecccc--c-cCccHHHHHHHHHh-cCCCEEEEcCC
Confidence 344555555 45665667777888887777777754 5788888877521 0 12335666666654 36677666655
Q ss_pred ChhhhHHHHHHHHhhCCCcEEEEe
Q 021144 252 SPRFIHGLILSVRKVTSKPVIIYP 275 (317)
Q Consensus 252 ~p~~~~~~l~~l~~~~~~pl~vyP 275 (317)
.|. ..++.+++. +.|+++..
T Consensus 106 ~p~---~~~~~l~~~-gi~vi~~v 125 (328)
T 2gjl_A 106 DPG---EHIAEFRRH-GVKVIHKC 125 (328)
T ss_dssp CCH---HHHHHHHHT-TCEEEEEE
T ss_pred CcH---HHHHHHHHc-CCCEEeeC
Confidence 453 344444443 45555443
No 275
>1w5q_A Delta-aminolevulinic acid dehydratase; synthase, evolution, metalloenzyme, porphobilinogen synthase, protein engineering,; 1.4A {Pseudomonas aeruginosa} PDB: 1w5p_A* 1w5o_A 1w5n_A 1w56_A 1w5m_A 1w54_A 1gzg_A* 1b4k_A 2woq_A* 2c14_A* 2c16_A* 2c19_A* 2c15_A* 2c18_A* 2c13_A*
Probab=49.71 E-value=1.6e+02 Score=27.19 Aligned_cols=219 Identities=16% Similarity=0.139 Sum_probs=129.2
Q ss_pred HHHHHHHHHHHHhhccccccccccccHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCCC
Q 021144 55 HLVRKVHLDYLDAGANIIITASYQATIQGFEAK-GFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSRP 133 (317)
Q Consensus 55 e~V~~iH~~Yl~AGAdiI~TnTy~as~~~l~~~-g~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (317)
+.+.+.-++-++.|-.-|.. |+..+..+++. |-+...-.-++.+|++..|++. .+
T Consensus 66 d~l~~~~~~~~~lGi~~v~L--Fgv~~~~~KD~~gs~A~~~~g~v~rair~iK~~~----------------------pd 121 (337)
T 1w5q_A 66 DQLLIEAEEWVALGIPALAL--FPVTPVEKKSLDAAEAYNPEGIAQRATRALRERF----------------------PE 121 (337)
T ss_dssp HHHHHHHHHHHHTTCCEEEE--EECCCGGGCBSSCGGGGCTTSHHHHHHHHHHHHC----------------------TT
T ss_pred HHHHHHHHHHHHCCCCEEEE--ecCCCcccCCcccCccCCCCChHHHHHHHHHHHC----------------------CC
Confidence 56677778888999775443 45433333332 2110111248888888877653 13
Q ss_pred eEEEEe--eCCCcCccCCCCCC-CCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCC-C
Q 021144 134 VLVAAS--VGSYGAYLADGSEY-SGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGI-T 209 (317)
Q Consensus 134 ~~Vags--iGP~g~~l~~gseY-~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~-~ 209 (317)
.+|..+ +-||-..=++|--. .| .+.-++-.+...+|+-..+++|+|+++==-|-+- .+.+|.+++.+.+- +
T Consensus 122 l~vitDvcLc~YT~HGHcGil~~~g----~V~ND~Tl~~L~k~Als~A~AGADiVAPSdMMDG-rV~aIR~aLd~~G~~~ 196 (337)
T 1w5q_A 122 LGIITDVCLCEFTTHGQCGILDDDG----YVLNDVSIDVLVRQALSHAEAGAQVVAPSDMMDG-RIGAIREALESAGHTN 196 (337)
T ss_dssp SEEEEEECSTTTBTTCCSSCBCTTS----CBCHHHHHHHHHHHHHHHHHTTCSEEEECSCCTT-HHHHHHHHHHHTTCTT
T ss_pred eEEEEeeecccCCCCCcceeeCCCC----cCccHHHHHHHHHHHHHHHHcCCCeEeccccccc-HHHHHHHHHHHCCCCC
Confidence 555554 45665544443321 11 2677888888888999999999999997777765 35788888888763 3
Q ss_pred ccEEEEEEEcCC-------------------C-----cccCCCcHHHHHHHhh--cCCCceEEEEcCCChhhhHHHHHHH
Q 021144 210 IPAWFSFNSKDG-------------------I-----NVVSGDSILECASIAD--SCEQVVAVGINCTSPRFIHGLILSV 263 (317)
Q Consensus 210 ~pv~iSf~~~~~-------------------~-----~l~~G~~l~~a~~~~~--~~~~~~aiGvNC~~p~~~~~~l~~l 263 (317)
+|++ |.+.+=. | .+..+. -.+++..+. -..|.+.|.|-=.-| -+.+++.+
T Consensus 197 v~Im-sYsaKyASafYGPFRdAa~Sap~f~~GDrktYQmdpaN-~~EAlrE~~~Di~EGAD~vMVKPal~--YLDIir~v 272 (337)
T 1w5q_A 197 VRVM-AYSAKYASAYYGPFRDAVGSASNLGKGNRATYQMDPAN-SDEALHEVAADLAEGADMVMVKPGMP--YLDIVRRV 272 (337)
T ss_dssp CEEE-EEEEEBCCGGGHHHHHC----------CGGGTSBCTTC-SHHHHHHHHHHHHTTCSEEEEESCGG--GHHHHHHH
T ss_pred ceee-hhHHHHHHHHHHHHHHHhcCCcccCCCCccccCCCCCC-hHHHHHHHHhhHHhCCCEEEEcCCCc--hHHHHHHH
Confidence 4544 5544310 0 011111 123443331 124789999876643 35677888
Q ss_pred HhhCCCcEEEEeCCCCc---cccccccccccCCCChhhHHHHHHHHHHccc
Q 021144 264 RKVTSKPVIIYPNSGET---YNAELKKWVVSFSLHFFPLELILNPFASCRL 311 (317)
Q Consensus 264 ~~~~~~pl~vyPNaG~~---~d~~~~~w~~~~~~~~~~~~~~~~~w~~~~~ 311 (317)
++.++.|+.+|-=+||- .-...+.|.+ .....+....+.++|.
T Consensus 273 k~~~~~PvaaYqVSGEYAMikaAa~~GwiD-----~~~v~Esl~~~kRAGA 318 (337)
T 1w5q_A 273 KDEFRAPTFVYQVSGEYAMHMGAIQNGWLA-----ESVILESLTAFKRAGA 318 (337)
T ss_dssp HHHHCSCEEEEECHHHHHHHHHHHHTTSSC-----TTHHHHHHHHHHHHTC
T ss_pred HHhcCCCEEEEEcCcHHHHHHHHHHcCCcc-----HHHHHHHHHHHHhcCC
Confidence 88889999999999962 2233456753 2234444444444443
No 276
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=49.71 E-value=1.6e+02 Score=27.32 Aligned_cols=27 Identities=19% Similarity=0.081 Sum_probs=19.9
Q ss_pred CCChHHHHHHHHHHHHhhccccccccc
Q 021144 51 VSSPHLVRKVHLDYLDAGANIIITASY 77 (317)
Q Consensus 51 l~~Pe~V~~iH~~Yl~AGAdiI~TnTy 77 (317)
+..++...+.-+.-++||+|+|+..+-
T Consensus 95 ~g~~~~~~e~~~~a~~aGvdvI~id~a 121 (361)
T 3r2g_A 95 VGCTENELQRAEALRDAGADFFCVDVA 121 (361)
T ss_dssp ECSSHHHHHHHHHHHHTTCCEEEEECS
T ss_pred cCCCHHHHHHHHHHHHcCCCEEEEeCC
Confidence 444555666778889999999988653
No 277
>1n82_A Xylanase, intra-cellular xylanase; hydrolase; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 3mua_A* 2q8x_A* 3msd_A* 3msg_A* 3mui_A* 3ms8_A
Probab=49.15 E-value=34 Score=31.28 Aligned_cols=51 Identities=20% Similarity=0.169 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHhCC--CCEEEecc-----CCCHHHHHHHHHHHHHhCCCccEEEE-EEEc
Q 021144 167 KEFHRRRVLILANSG--ADLIAFET-----IPNKLEAKAYAELLEEEGITIPAWFS-FNSK 219 (317)
Q Consensus 167 ~~~h~~qi~~l~~~g--vD~l~~ET-----~p~~~Ea~a~~~~~~~~~~~~pv~iS-f~~~ 219 (317)
.+.+...++.|.+.| +|.|-+.+ .|+..+++.+++.+.+.+ +||||| +.+.
T Consensus 187 ~~~~~~~v~~l~~~g~~idgiG~Q~H~~~~~~~~~~~~~~l~~~a~~G--~pi~iTEldi~ 245 (331)
T 1n82_A 187 REKIFALVKSLRDKGIPIHGIGMQAHWSLTRPSLDEIRAAIERYASLG--VVLHITELDVS 245 (331)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEECCEEESSSSCHHHHHHHHHHHHTTT--CEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCccceEEeceecCCCCCCHHHHHHHHHHHHhcC--CeEEEEeceec
Confidence 345556788787778 49998763 478899999998888765 999998 4443
No 278
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=49.14 E-value=1.8e+02 Score=27.74 Aligned_cols=103 Identities=15% Similarity=0.093 Sum_probs=55.2
Q ss_pred HHHHHHHhCCCCEEEeccCCCHH---HHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEE
Q 021144 172 RRVLILANSGADLIAFETIPNKL---EAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGI 248 (317)
Q Consensus 172 ~qi~~l~~~gvD~l~~ET~p~~~---Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGv 248 (317)
..++.+...+.|+++++|-+.+. +...-+..+.+.. .|.-+-|.++.. .|....+.+..+.+..++.+|=+
T Consensus 173 ~al~~a~~~~~DvVIIDTaGrl~~d~~lm~el~~i~~~~--~pd~vlLVvDA~----~gq~a~~~a~~f~~~~~i~gVIl 246 (443)
T 3dm5_A 173 EGVDYFKSKGVDIIIVDTAGRHKEDKALIEEMKQISNVI--HPHEVILVIDGT----IGQQAYNQALAFKEATPIGSIIV 246 (443)
T ss_dssp HHHHHHHHTTCSEEEEECCCCSSCCHHHHHHHHHHHHHH--CCSEEEEEEEGG----GGGGHHHHHHHHHHSCTTEEEEE
T ss_pred HHHHHHHhCCCCEEEEECCCcccchHHHHHHHHHHHHhh--cCceEEEEEeCC----CchhHHHHHHHHHhhCCCeEEEE
Confidence 44556666789999999987432 2222222222221 233333434321 25555556666665567888888
Q ss_pred cCCC-hhhhHHHHHHHHhhCCCcEEEEeCCCCccc
Q 021144 249 NCTS-PRFIHGLILSVRKVTSKPVIIYPNSGETYN 282 (317)
Q Consensus 249 NC~~-p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d 282 (317)
|=.. ...- ..+..+...++.|+...- .|+..|
T Consensus 247 TKlD~~~~g-G~~ls~~~~~g~PI~fig-~Ge~vd 279 (443)
T 3dm5_A 247 TKLDGSAKG-GGALSAVAATGAPIKFIG-TGEKID 279 (443)
T ss_dssp ECCSSCSSH-HHHHHHHHTTCCCEEEEE-CSSSTT
T ss_pred ECCCCcccc-cHHHHHHHHHCCCEEEEE-cCCChH
Confidence 8763 2222 223334445788975444 476543
No 279
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=49.14 E-value=48 Score=32.73 Aligned_cols=101 Identities=21% Similarity=0.225 Sum_probs=60.1
Q ss_pred HHHHHHhCCCCEEEeccCCCHHHH-------------HHHHHHHHHhCCCccEEEEEEEcC-------------------
Q 021144 173 RVLILANSGADLIAFETIPNKLEA-------------KAYAELLEEEGITIPAWFSFNSKD------------------- 220 (317)
Q Consensus 173 qi~~l~~~gvD~l~~ET~p~~~Ea-------------~a~~~~~~~~~~~~pv~iSf~~~~------------------- 220 (317)
.++.++++|+|.+.+-|-. +... ..+-++.++.+ +..+++++.++.
T Consensus 352 ~a~~~l~aGad~V~igt~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~g-~~~ivv~iD~~~~~~~~~~~~~~~~~~~~~~ 429 (555)
T 1jvn_A 352 VASLYFRSGADKVSIGTDA-VYAAEKYYELGNRGDGTSPIETISKAYG-AQAVVISVDPKRVYVNSQADTKNKVFETEYP 429 (555)
T ss_dssp HHHHHHHHTCSEEEECHHH-HHHHHHHHHTTSCCCSCSHHHHHHHHHC-GGGEEEEECEEEEEESSGGGCSSCCEECSSC
T ss_pred HHHHHHHcCCCEEEECCHH-hhCchhhccccccccCHHHHHHHHHHhC-CCcEEEEEEcccccccccccccccccccccc
Confidence 3555667899999998754 2211 22334455555 346888887752
Q ss_pred --CCc-------ccCC------CcHHHHHHHhhcCCCceEEEEcCCChhh-----hHHHHHHHHhhCCCcEEEEeCCC
Q 021144 221 --GIN-------VVSG------DSILECASIADSCEQVVAVGINCTSPRF-----IHGLILSVRKVTSKPVIIYPNSG 278 (317)
Q Consensus 221 --~~~-------l~~G------~~l~~a~~~~~~~~~~~aiGvNC~~p~~-----~~~~l~~l~~~~~~pl~vyPNaG 278 (317)
++. ...| .+..+.++.+.+ .++..|-+++...+. =..+++.+++..+.|+++ |+|
T Consensus 430 ~~~g~~~~~~~v~~~Gw~~~~~~~~~e~a~~~~~-~Ga~~il~t~~~~dG~~~G~d~~li~~l~~~~~iPVIa--sGG 504 (555)
T 1jvn_A 430 GPNGEKYCWYQCTIKGGRESRDLGVWELTRACEA-LGAGEILLNCIDKDGSNSGYDLELIEHVKDAVKIPVIA--SSG 504 (555)
T ss_dssp CTTCCCEEEEEEEETTTTEEEEEEHHHHHHHHHH-TTCCEEEECCGGGTTTCSCCCHHHHHHHHHHCSSCEEE--CSC
T ss_pred CCCCCcceeEEEEEecCccCCCCCHHHHHHHHHH-cCCCEEEEeCCCCCCCCCCCCHHHHHHHHHhCCccEEE--ECC
Confidence 110 1122 345566666765 578888887732111 246788888888899765 454
No 280
>3obk_A Delta-aminolevulinic acid dehydratase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; HET: PBG; 2.50A {Toxoplasma gondii ME49}
Probab=49.07 E-value=1.7e+02 Score=27.24 Aligned_cols=206 Identities=18% Similarity=0.202 Sum_probs=121.3
Q ss_pred hHHHHHHHHHHHHhhccccccccccccHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCC
Q 021144 54 PHLVRKVHLDYLDAGANIIITASYQATIQGFEAK-GFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSR 132 (317)
Q Consensus 54 Pe~V~~iH~~Yl~AGAdiI~TnTy~as~~~l~~~-g~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~~~~~~~~~ 132 (317)
.+.+.+.-++-++.|-.-|.. |+......++. |-+...-.-++.+|++..|++. .
T Consensus 72 id~l~~~~~~~~~lGi~av~L--Fgv~~p~~KD~~gs~A~~~~g~v~rAir~iK~~~----------------------P 127 (356)
T 3obk_A 72 MEDLLKEVGEARSYGIKAFML--FPKVDDELKSVMAEESYNPDGLLPRAIMALKEAF----------------------P 127 (356)
T ss_dssp HHHHHHHHHHHHHTTCCEEEE--EEECCGGGCBSSCGGGGCTTSHHHHHHHHHHHHS----------------------T
T ss_pred HHHHHHHHHHHHHCCCCEEEE--ecCCCcccCCcccccccCCCChHHHHHHHHHHHC----------------------C
Confidence 356666667788899775543 44432333322 2110011247888888777543 1
Q ss_pred CeEEEEee--CCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCC-C
Q 021144 133 PVLVAASV--GSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGI-T 209 (317)
Q Consensus 133 ~~~Vagsi--GP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~-~ 209 (317)
+.+|..++ -||-..=++|--.. .- ..+.-++-.+....|+-..+++|+|+++==-|-+- .+.+|.+++.+.+- +
T Consensus 128 ~l~VitDVcLc~YT~HGHcGil~~-~~-g~V~ND~Tl~~Lak~Als~A~AGADiVAPSdMMDG-rV~aIR~aLd~~G~~~ 204 (356)
T 3obk_A 128 DVLLLADVALDPYSSMGHDGVVDE-QS-GKIVNDLTVHQLCKQAITLARAGADMVCPSDMMDG-RVSAIRESLDMEGCTD 204 (356)
T ss_dssp TCEEEEEECSGGGBTTCCSSCBCT-TT-CCBCHHHHHHHHHHHHHHHHHHTCSEEEECSCCTT-HHHHHHHHHHHTTCTT
T ss_pred CCEEEEeeccccccCCCcceeeeC-CC-CCCCCHHHHHHHHHHHHHHHHcCCCeEeccccccC-HHHHHHHHHHHCCCCC
Confidence 35566554 45554433332111 00 12677888888888999999999999997777765 35788888888663 4
Q ss_pred ccEEEEEEEcCC------------Cc-ccCC---------CcHHHHHHHhh--cCCCceEEEEcCCChhhhHHHHHHHHh
Q 021144 210 IPAWFSFNSKDG------------IN-VVSG---------DSILECASIAD--SCEQVVAVGINCTSPRFIHGLILSVRK 265 (317)
Q Consensus 210 ~pv~iSf~~~~~------------~~-l~~G---------~~l~~a~~~~~--~~~~~~aiGvNC~~p~~~~~~l~~l~~ 265 (317)
.|++ |.+.+=. .. ...| -.-.+|+..+. -..|.+.|.|-=.-| -+.+|+.+++
T Consensus 205 v~IM-sYsaKyASafYGPFRdAa~Sa~p~~GDRktYQmdpaN~~EAlrE~~lDi~EGAD~vMVKPal~--YLDIi~~vk~ 281 (356)
T 3obk_A 205 TSIL-AYSCKYASSFYGPFRDALDSHMVGGTDKKTYQMDPSNSREAEREAEADASEGADMLMVKPGLP--YLDVLAKIRE 281 (356)
T ss_dssp SEEE-EEEEEBCCSTTHHHHHHHTCCCSTTCCSTTTSBCTTCSHHHHHHHHHHHHTTCSEEEEESSGG--GHHHHHHHHH
T ss_pred ccee-hhHHHHhhhccchhhHHhcCCCCCCCCccccCCCCCCHHHHHHHHHhhHhcCCCEEEecCCCc--HHHHHHHHHh
Confidence 4544 6654310 01 1111 11233433321 124789999876543 3567777888
Q ss_pred hCCCcEEEEeCCCCc---ccccccccc
Q 021144 266 VTSKPVIIYPNSGET---YNAELKKWV 289 (317)
Q Consensus 266 ~~~~pl~vyPNaG~~---~d~~~~~w~ 289 (317)
.++.|+.+|-=+||- .-...+.|.
T Consensus 282 ~~~~PvaaYqVSGEYAMikAAa~~Gwi 308 (356)
T 3obk_A 282 KSKLPMVAYHVSGEYAMLKAAAEKGYI 308 (356)
T ss_dssp HCSSCEEEEECHHHHHHHHHHHHHTSS
T ss_pred cCCCCEEEEEccHHHHHHHHHHHcCCc
Confidence 889999999999962 223345675
No 281
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=49.05 E-value=52 Score=29.67 Aligned_cols=132 Identities=12% Similarity=0.049 Sum_probs=78.7
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEec--cCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhh
Q 021144 161 VSLETLKEFHRRRVLILANSGADLIAFE--TIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIAD 238 (317)
Q Consensus 161 ~s~~el~~~h~~qi~~l~~~gvD~l~~E--T~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~ 238 (317)
+....++++ ++... .-||++=|- |..-..+++..++++++.+ ++++.--|+-+. -+..| .+.+.++.++
T Consensus 50 lg~~~~~Dl----Le~ag-~yID~lKfg~GTs~l~~~l~ekI~l~~~~g--V~v~~GGTlfE~-~l~qg-~~~~yl~~~k 120 (276)
T 1u83_A 50 YPLQFFKDA----IAGAS-DYIDFVKFGWGTSLLTKDLEEKISTLKEHD--ITFFFGGTLFEK-YVSQK-KVNEFHRYCT 120 (276)
T ss_dssp CCHHHHHHH----HHHHG-GGCCEEEECTTGGGGCTTHHHHHHHHHHTT--CEEEECHHHHHH-HHHTT-CHHHHHHHHH
T ss_pred CCHHHHHHH----HHHhh-hhcceEEecCcchhhhHHHHHHHHHHHHcC--CeEeCCcHHHHH-HHHcC-cHHHHHHHHH
Confidence 455555543 33333 469999665 3333334788888888876 555521111100 12233 6677777777
Q ss_pred cCCCceEEEEcCCC---h-hhhHHHHHHHHhhCCCcEEEEeCCCCccccccccccccCCCChhhHHHHHHHHHHcccc
Q 021144 239 SCEQVVAVGINCTS---P-RFIHGLILSVRKVTSKPVIIYPNSGETYNAELKKWVVSFSLHFFPLELILNPFASCRLI 312 (317)
Q Consensus 239 ~~~~~~aiGvNC~~---p-~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~w~~~~~~~~~~~~~~~~~w~~~~~~ 312 (317)
+ .+.++|=|+-.. | +.-..+++.. .+. +.|.+.-|.. |+. .....+|+.|.+.+++++++|.=
T Consensus 121 ~-lGF~~IEISdGti~l~~~~~~~lI~~a---~~~-f~Vl~EvG~K-~~~-----~~~~~~~~~~I~~~~~dLeAGA~ 187 (276)
T 1u83_A 121 Y-FGCEYIEISNGTLPMTNKEKAAYIADF---SDE-FLVLSEVGSK-DAE-----LASRQSSEEWLEYIVEDMEAGAE 187 (276)
T ss_dssp H-TTCSEEEECCSSSCCCHHHHHHHHHHH---TTT-SEEEEECSCC-C-----------CCSTHHHHHHHHHHHHTEE
T ss_pred H-cCCCEEEECCCcccCCHHHHHHHHHHH---Hhh-cEEeeecccc-Ccc-----ccCCCCHHHHHHHHHHHHHCCCc
Confidence 5 688999898853 3 4444455544 344 8888988852 221 12346899999999999999964
No 282
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=48.83 E-value=1.1e+02 Score=30.82 Aligned_cols=106 Identities=12% Similarity=0.033 Sum_probs=65.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCEEEeccCCC----------------H---HHHHHHHHHHHHhCCCccEEEEEEEcCCCcc
Q 021144 164 ETLKEFHRRRVLILANSGADLIAFETIPN----------------K---LEAKAYAELLEEEGITIPAWFSFNSKDGINV 224 (317)
Q Consensus 164 ~el~~~h~~qi~~l~~~gvD~l~~ET~p~----------------~---~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l 224 (317)
..+.+||++++ +.|+.+|+.|.+.- - ...+.+.+++.+.+ .++++++.= .|+.
T Consensus 39 ~~~~~~y~~ra----~gG~Gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vh~~g--~~i~~Ql~h--~Gr~ 110 (729)
T 1o94_A 39 GFQSAHRSVKA----EGGWAALNTEYCSINPESDDTHRLSARIWDEGDVRNLKAMTDEVHKYG--ALAGVELWY--GGAH 110 (729)
T ss_dssp HHHHHHHHHHH----HTTCSEEEEEEEESSTTSCCTTSCCEECSSHHHHHHHHHHHHHHHTTT--CEEEEEEEC--CGGG
T ss_pred HHHHHHHHHHh----cCCCCEEEEcceEecCcccCCCCCCCccCChHHhHHHHHHHHHHHhCC--CeEEEEecC--CCcc
Confidence 47888888765 47899998885411 1 12444555566654 788888742 1111
Q ss_pred cC-----------------C------------------CcHHHHHHHhhcCCCceEEEEcCCC---------h-------
Q 021144 225 VS-----------------G------------------DSILECASIADSCEQVVAVGINCTS---------P------- 253 (317)
Q Consensus 225 ~~-----------------G------------------~~l~~a~~~~~~~~~~~aiGvNC~~---------p------- 253 (317)
.+ + ..+.++++.+.+ .+.++|=|||++ |
T Consensus 111 ~~~~~~~~~~~~ps~~~~~~~~~~~p~~~t~~eI~~~i~~f~~aA~~a~~-aGfDgVEih~a~gyLl~qFlsp~~N~R~D 189 (729)
T 1o94_A 111 APNMESRATPRGPSQYASEFETLSYCKEMDLSDIAQVQQFYVDAAKRSRD-AGFDIVYVYGAHSYLPLQFLNPYYNKRTD 189 (729)
T ss_dssp SCCTTTCCCCEESSCCBCSSSTTCBCEECCHHHHHHHHHHHHHHHHHHHH-TTCSEEEEEECTTCHHHHHHCTTTCCCCS
T ss_pred ccccccCCCCcCCCcccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHH-cCCCEEEEccccchHHHHhcCCccCCCcC
Confidence 00 0 123345555544 589999999976 3
Q ss_pred ----------hhhHHHHHHHHhhC--CCcEEEEeCCC
Q 021144 254 ----------RFIHGLILSVRKVT--SKPVIIYPNSG 278 (317)
Q Consensus 254 ----------~~~~~~l~~l~~~~--~~pl~vyPNaG 278 (317)
..+..+++.+++.. ++|+++.=+..
T Consensus 190 ~yGGs~enR~r~~~eiv~avr~~vg~~~pv~vrls~~ 226 (729)
T 1o94_A 190 KYGGSLENRARFWLETLEKVKHAVGSDCAIATRFGVD 226 (729)
T ss_dssp TTSSSHHHHTHHHHHHHHHHHHHHTTTSEEEEEEEEE
T ss_pred cCCCCHHHHhHHHHHHHHHHHHHhCCCceEEEEEccc
Confidence 23566677777766 78888877653
No 283
>4f2d_A L-arabinose isomerase; structural genomics, PSI-1, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: MSE RB0; 2.30A {Escherichia coli} PDB: 2ajt_A 2hxg_A
Probab=48.25 E-value=1e+02 Score=30.11 Aligned_cols=42 Identities=14% Similarity=0.031 Sum_probs=27.1
Q ss_pred CHHHHHHHHHHHHHHHHhC---CCCEEEeccCCCHHHHHHHHHHH
Q 021144 162 SLETLKEFHRRRVLILANS---GADLIAFETIPNKLEAKAYAELL 203 (317)
Q Consensus 162 s~~el~~~h~~qi~~l~~~---gvD~l~~ET~p~~~Ea~a~~~~~ 203 (317)
..+++.+.=++.++.|.+. .+.++.-.++.+.+|++.+++.+
T Consensus 23 ~~~~v~~~~~~~~~~l~~~~~l~~~vv~~g~v~t~~~~~~~~~~~ 67 (500)
T 4f2d_A 23 TLRQVTQHAEHVVNALNTEAKLPCKLVLKPLGTTPDEITAICRDA 67 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCSSEEEECCCBCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccccCCCeEEEecCcCCCHHHHHHHHHHh
Confidence 5566666556666666553 25777777777777777766655
No 284
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=48.20 E-value=33 Score=34.10 Aligned_cols=47 Identities=13% Similarity=0.254 Sum_probs=34.1
Q ss_pred HHHHHHHHHhCCCCEEEeccCCC-HHHHHHHHHHHHHhCCCccEEEEE
Q 021144 170 HRRRVLILANSGADLIAFETIPN-KLEAKAYAELLEEEGITIPAWFSF 216 (317)
Q Consensus 170 h~~qi~~l~~~gvD~l~~ET~p~-~~Ea~a~~~~~~~~~~~~pv~iSf 216 (317)
..+|++.|+++|||+|++.|-.- -.-....++.+++..+++|+++.=
T Consensus 282 ~~eR~~aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~~~p~~~viaGN 329 (556)
T 4af0_A 282 DKDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQTYPKIDVIAGN 329 (556)
T ss_dssp HHHHHHHHHHTTCCEEEECCSCCCSHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred HHHHHHHHHhcCCcEEEEeccccccHHHHHHHHHHHhhCCcceEEecc
Confidence 45689999999999999997643 333455666677766678887544
No 285
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=48.19 E-value=1.1e+02 Score=26.63 Aligned_cols=86 Identities=20% Similarity=0.238 Sum_probs=48.6
Q ss_pred HHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEE-EcC-CC--
Q 021144 177 LANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVG-INC-TS-- 252 (317)
Q Consensus 177 l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiG-vNC-~~-- 252 (317)
+.++|+|.+.+-..+. .|++..+..+++.+ +++++-++ ..++.+.+........+...++ +.- ++
T Consensus 114 a~~aGadgv~v~d~~~-~~~~~~~~~~~~~g--~~~i~~~a--------~~t~~e~~~~~~~~~~g~v~~~s~~G~tG~~ 182 (262)
T 1rd5_A 114 MKEAGVHGLIVPDLPY-VAAHSLWSEAKNNN--LELVLLTT--------PAIPEDRMKEITKASEGFVYLVSVNGVTGPR 182 (262)
T ss_dssp HHHTTCCEEECTTCBT-TTHHHHHHHHHHTT--CEECEEEC--------TTSCHHHHHHHHHHCCSCEEEECSSCCBCTT
T ss_pred HHHcCCCEEEEcCCCh-hhHHHHHHHHHHcC--CceEEEEC--------CCCCHHHHHHHHhcCCCeEEEecCCCCCCCC
Confidence 6779999888766553 46777777788766 55444332 2233333222222222333332 111 22
Q ss_pred ---hhhhHHHHHHHHhhCCCcEEE
Q 021144 253 ---PRFIHGLILSVRKVTSKPVII 273 (317)
Q Consensus 253 ---p~~~~~~l~~l~~~~~~pl~v 273 (317)
+......++.+++..+.|+++
T Consensus 183 ~~~~~~~~~~i~~v~~~~~~pI~v 206 (262)
T 1rd5_A 183 ANVNPRVESLIQEVKKVTNKPVAV 206 (262)
T ss_dssp SCBCTHHHHHHHHHHHHCSSCEEE
T ss_pred cCCCchHHHHHHHHHhhcCCeEEE
Confidence 234556788888877889766
No 286
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=47.88 E-value=1.5e+02 Score=27.07 Aligned_cols=102 Identities=12% Similarity=0.121 Sum_probs=60.6
Q ss_pred HHHHHHHHHHhCCCCEEEecc-CC---------------CHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCc---
Q 021144 169 FHRRRVLILANSGADLIAFET-IP---------------NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDS--- 229 (317)
Q Consensus 169 ~h~~qi~~l~~~gvD~l~~ET-~p---------------~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~--- 229 (317)
.+.+.++.+.+.|+|.|=+-. .| +.+-+..+++++++.. ++||.+-+...-+ +..+
T Consensus 71 ~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v-~~PV~vKiR~g~~----~~~~~~~ 145 (350)
T 3b0p_A 71 SLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAV-RVPVTVKMRLGLE----GKETYRG 145 (350)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHC-SSCEEEEEESCBT----TCCCHHH
T ss_pred HHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHh-CCceEEEEecCcC----ccccHHH
Confidence 455567777788999986653 22 3445666777777754 6898875542111 1122
Q ss_pred HHHHHHHhhcCCCceEEEEcCCC------h-------hhhHHHHHHHHhhC-CCcEEEEeCCC
Q 021144 230 ILECASIADSCEQVVAVGINCTS------P-------RFIHGLILSVRKVT-SKPVIIYPNSG 278 (317)
Q Consensus 230 l~~a~~~~~~~~~~~aiGvNC~~------p-------~~~~~~l~~l~~~~-~~pl~vyPNaG 278 (317)
..+.++.+.+ .++++|-|-+.. + ..-..+++.+++.. +.|++ .|+|
T Consensus 146 ~~~~a~~l~~-aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVi--anGg 205 (350)
T 3b0p_A 146 LAQSVEAMAE-AGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTFV--TNGG 205 (350)
T ss_dssp HHHHHHHHHH-TTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCTTSEEE--EESS
T ss_pred HHHHHHHHHH-cCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCCCCeEE--EECC
Confidence 3445555554 478887776631 1 11245677788776 77755 5665
No 287
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=47.65 E-value=1.7e+02 Score=26.80 Aligned_cols=115 Identities=14% Similarity=0.122 Sum_probs=63.5
Q ss_pred CeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEec---cCCC----------HHHHH--
Q 021144 133 PVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFE---TIPN----------KLEAK-- 197 (317)
Q Consensus 133 ~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~E---T~p~----------~~Ea~-- 197 (317)
+++|-|=|-++++...| .| .+.+++.+ +++.+++.|+|+|=+- |-|. -+|++
T Consensus 27 ~~~vMGIlNvTpDSFsd------~~---~~~~~al~----~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv 93 (314)
T 3tr9_A 27 EPAVMGIINVSPNSFYH------PH---LDLNSALR----TAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRL 93 (314)
T ss_dssp SCEEEEEEECSTTCSBC------BC---CSHHHHHH----HHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHH
T ss_pred CcEEEEEEeCCCCchhh------cc---CCHHHHHH----HHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHH
Confidence 46788888888775543 33 35555544 6777888999998554 5553 34433
Q ss_pred -HHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCCC---hhhhHHHHHHHHhhCCCcEEE
Q 021144 198 -AYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTS---PRFIHGLILSVRKVTSKPVII 273 (317)
Q Consensus 198 -a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~~---p~~~~~~l~~l~~~~~~pl~v 273 (317)
-+++++++. ..+.||+- -...+-+-+.++. |++ -||=.+ -+.|.+++. + .+.|+++
T Consensus 94 ~pvI~~l~~~---~~vpISID---------T~~~~Va~aAl~a--Ga~--iINDVsg~~~~~m~~v~a---~-~g~~vVl 153 (314)
T 3tr9_A 94 LPVIDAIKKR---FPQLISVD---------TSRPRVMREAVNT--GAD--MINDQRALQLDDALTTVS---A-LKTPVCL 153 (314)
T ss_dssp HHHHHHHHHH---CCSEEEEE---------CSCHHHHHHHHHH--TCC--EEEETTTTCSTTHHHHHH---H-HTCCEEE
T ss_pred HHHHHHHHhh---CCCeEEEe---------CCCHHHHHHHHHc--CCC--EEEECCCCCchHHHHHHH---H-hCCeEEE
Confidence 345555553 23556662 2222222222332 333 244432 224444433 3 3689999
Q ss_pred EeCCCCc
Q 021144 274 YPNSGET 280 (317)
Q Consensus 274 yPNaG~~ 280 (317)
.++.|.+
T Consensus 154 Mh~~G~P 160 (314)
T 3tr9_A 154 MHFPSET 160 (314)
T ss_dssp ECCCCTT
T ss_pred ECCCCCC
Confidence 9999864
No 288
>1w32_A Endo-1,4-beta-xylanase A precursor; mutant, calcium ION, thermostable, glycosyle hydrolase, family 10, error prone PCR, hydrolase; 1.2A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1w2p_A 1w2v_A 1w3h_A 1clx_A 1e5n_A* 1xys_A
Probab=47.63 E-value=34 Score=31.72 Aligned_cols=50 Identities=14% Similarity=0.176 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHhCC--CCEEEecc-----CCCHHHHHHHHHHHH--HhCCCccEEEE-EEEc
Q 021144 168 EFHRRRVLILANSG--ADLIAFET-----IPNKLEAKAYAELLE--EEGITIPAWFS-FNSK 219 (317)
Q Consensus 168 ~~h~~qi~~l~~~g--vD~l~~ET-----~p~~~Ea~a~~~~~~--~~~~~~pv~iS-f~~~ 219 (317)
+.+..+++.|.+.| +|.|-+.. .|+..+++.+++.+. ..+ +||+|| +.+.
T Consensus 192 ~~~~~~v~~l~~~G~~iDgiG~Q~H~~~~~p~~~~~~~~l~~~a~~~~G--l~i~ITElDv~ 251 (348)
T 1w32_A 192 TALVNLVQRLLNNGVPIDGVGFQMHVMNDYPSIANIRQAMQKIVALSPT--LKIKITELDVR 251 (348)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEEESSSSCHHHHHHHHHHHHTTCSS--CEEEEEEEEEE
T ss_pred HHHHHHHHHHHHCCCcccEEEeccccCCCCCCHHHHHHHHHHHhcccCC--CeEEEEeCccc
Confidence 34556788887778 59997754 378899999998888 655 999998 5443
No 289
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=47.53 E-value=1.2e+02 Score=27.98 Aligned_cols=60 Identities=10% Similarity=-0.026 Sum_probs=37.6
Q ss_pred HHHHHHHHHhCCCC-EEEeccC-----------CCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHh
Q 021144 170 HRRRVLILANSGAD-LIAFETI-----------PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIA 237 (317)
Q Consensus 170 h~~qi~~l~~~gvD-~l~~ET~-----------p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~ 237 (317)
|.+-++.+.+.++| .|-+.-- .+.+.+..+++++++.. ++|+++-++.. .+..+.++.+
T Consensus 143 ~~~~a~~l~~~g~~d~ielNisCPn~~G~~~l~~~~e~l~~il~av~~~~-~~PV~vKi~p~--------~~~~~~a~~~ 213 (345)
T 3oix_A 143 THTILXMVEASKYQGLVELNLSCPNVPGXPQIAYDFETTDQILSEVFTYF-TKPLGIKLPPY--------FDIVHFDQAA 213 (345)
T ss_dssp HHHHHHHHHHSSCCSEEEEECSCCCSTTCCCGGGCHHHHHHHHHHHTTTC-CSCEEEEECCC--------CCHHHHHHHH
T ss_pred HHHHHHHHhccCCCcEEEEecCCCCcCCchhhcCCHHHHHHHHHHHHHHh-CCCeEEEECCC--------CCHHHHHHHH
Confidence 44455566667776 7765521 35567778888888754 68999887532 3455555555
Q ss_pred h
Q 021144 238 D 238 (317)
Q Consensus 238 ~ 238 (317)
+
T Consensus 214 ~ 214 (345)
T 3oix_A 214 A 214 (345)
T ss_dssp H
T ss_pred H
Confidence 4
No 290
>1xyz_A 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrolase, xylanase, family F/10 of glycosyl hydrolases, glycosyltransferase; 1.40A {Clostridium thermocellum} SCOP: c.1.8.3
Probab=47.52 E-value=1.2e+02 Score=27.69 Aligned_cols=49 Identities=12% Similarity=0.143 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHhCC--CCEEEeccC-----CCH--HHHHHHHHHHHHhCCCccEEEE-EEE
Q 021144 168 EFHRRRVLILANSG--ADLIAFETI-----PNK--LEAKAYAELLEEEGITIPAWFS-FNS 218 (317)
Q Consensus 168 ~~h~~qi~~l~~~g--vD~l~~ET~-----p~~--~Ea~a~~~~~~~~~~~~pv~iS-f~~ 218 (317)
+.+...++.|.+.| +|.|-+..- +.. .+++..++.+.+.+ +|++|| +.+
T Consensus 209 ~~~~~~v~~l~~~G~~idgiG~Q~H~~~~~~~~~~~~~~~~l~~~a~~G--~pi~iTEldi 267 (347)
T 1xyz_A 209 NAVFNMIKSMKERGVPIDGVGFQCHFINGMSPEYLASIDQNIKRYAEIG--VIVSFTEIDI 267 (347)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEEESSCCHHHHHHHHHHHHHHHHTT--CEEEEEEEEE
T ss_pred HHHHHHHHHHHHCCCCcceEEEeeecCCCCCchhHHHHHHHHHHHHhcC--CceEEEeccc
Confidence 34556777777778 599876532 222 57888888888766 999998 444
No 291
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=47.14 E-value=40 Score=30.50 Aligned_cols=56 Identities=20% Similarity=0.224 Sum_probs=38.2
Q ss_pred HHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEE
Q 021144 177 LANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGI 248 (317)
Q Consensus 177 l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGv 248 (317)
..++|+|+|.+-.|+ ..+.+.+++.++ .+.|+.+| -|-+++.+.+.+. .++++|++
T Consensus 212 A~~aGaD~I~ld~~~-~~~~k~av~~v~---~~ipi~As----------GGIt~eni~~~a~--tGvD~IsV 267 (286)
T 1x1o_A 212 ALEAGADLILLDNFP-LEALREAVRRVG---GRVPLEAS----------GNMTLERAKAAAE--AGVDYVSV 267 (286)
T ss_dssp HHHHTCSEEEEESCC-HHHHHHHHHHHT---TSSCEEEE----------SSCCHHHHHHHHH--HTCSEEEC
T ss_pred HHHcCCCEEEECCCC-HHHHHHHHHHhC---CCCeEEEE----------cCCCHHHHHHHHH--cCCCEEEE
Confidence 345689999999974 566776666554 24677654 3677777776665 37888877
No 292
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=47.04 E-value=1e+02 Score=28.70 Aligned_cols=110 Identities=11% Similarity=0.051 Sum_probs=61.6
Q ss_pred CCCHHH---HHHHHHHHHHHHHhCCCCEEEeccC----------C-----------CH-HH---HHHHHHHHHHh-CCCc
Q 021144 160 AVSLET---LKEFHRRRVLILANSGADLIAFETI----------P-----------NK-LE---AKAYAELLEEE-GITI 210 (317)
Q Consensus 160 ~~s~~e---l~~~h~~qi~~l~~~gvD~l~~ET~----------p-----------~~-~E---a~a~~~~~~~~-~~~~ 210 (317)
+++.+| +.+.|.+.++...++|.|.|=+=-- | ++ .. +..+++++++. +.+
T Consensus 142 ~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~- 220 (362)
T 4ab4_A 142 ALETEEINDIVEAYRSGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQ- 220 (362)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGG-
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCC-
Confidence 467666 4556777777778899999844321 1 11 12 33455666654 333
Q ss_pred cEEEEEEEcCC-CcccCCCcHHHH---HHHhhcCCCceEEEEcCCChhhhHHHHHHHHhhCCCcEEE
Q 021144 211 PAWFSFNSKDG-INVVSGDSILEC---ASIADSCEQVVAVGINCTSPRFIHGLILSVRKVTSKPVII 273 (317)
Q Consensus 211 pv~iSf~~~~~-~~l~~G~~l~~a---~~~~~~~~~~~aiGvNC~~p~~~~~~l~~l~~~~~~pl~v 273 (317)
||.+-++..+. .-..++.+.+++ ++.+.+ .+++.|=+-+.... .++++.+++..+.|+++
T Consensus 221 ~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~-~Gvd~i~v~~~~~~--~~~~~~ik~~~~iPvi~ 284 (362)
T 4ab4_A 221 RVGVHLAPRADAHDMGDADRAETFTYVARELGK-RGIAFICSREREAD--DSIGPLIKEAFGGPYIV 284 (362)
T ss_dssp GEEEEECTTCCSSSCCCTTHHHHHHHHHHHHHH-TTCSEEEEECCCCT--TCCHHHHHHHHCSCEEE
T ss_pred ceEEEeeccccccccCCCCcHHHHHHHHHHHHH-hCCCEEEECCCCCC--HHHHHHHHHHCCCCEEE
Confidence 88888875432 112233445444 444544 47887766553210 13466677777788765
No 293
>2w5f_A Endo-1,4-beta-xylanase Y; cellulosome, glycosidase, xylan degradation, hydrolase; HET: XYP; 1.90A {Clostridium thermocellum} PDB: 2wze_A* 2wys_A*
Probab=46.99 E-value=1e+02 Score=30.22 Aligned_cols=50 Identities=14% Similarity=0.093 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHhCC-CCEEEecc--------CCCHHHHHHHHHHHHHhCCCccEEEE-EEEc
Q 021144 168 EFHRRRVLILANSG-ADLIAFET--------IPNKLEAKAYAELLEEEGITIPAWFS-FNSK 219 (317)
Q Consensus 168 ~~h~~qi~~l~~~g-vD~l~~ET--------~p~~~Ea~a~~~~~~~~~~~~pv~iS-f~~~ 219 (317)
+.+.+.++.|.+.| +|.|-+.. .|+..+++..++.+.+.+ +||+|| +.+.
T Consensus 394 ~~~~~lv~~l~~~gvIdgiG~Q~H~~~~~~~~~~~~~~~~~l~~~a~~G--l~i~iTElDi~ 453 (540)
T 2w5f_A 394 DCIASICANLYNKGLLDGVGMQSHINADMNGFSGIQNYKAALQKYINIG--CDVQITELDIS 453 (540)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECCEEESCSSSTTCHHHHHHHHHHHHTTT--SEEEEEEEEEE
T ss_pred HHHHHHHHHHHhCCcccEEEEeeEecCCCCCCCCHHHHHHHHHHHHhcC--CcEEEEeeeec
Confidence 34445677777777 58774433 368889999988888766 999998 5554
No 294
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=46.99 E-value=1.6e+02 Score=26.27 Aligned_cols=100 Identities=13% Similarity=0.155 Sum_probs=58.8
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEE-----EeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcC-CCcccCCCc--HHHH
Q 021144 162 SLETLKEFHRRRVLILANSGADLI-----AFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKD-GINVVSGDS--ILEC 233 (317)
Q Consensus 162 s~~el~~~h~~qi~~l~~~gvD~l-----~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~-~~~l~~G~~--l~~a 233 (317)
+.+++.. +++.+...|+|++ +++...+.+++...+..+++...++|+++++.... +|.. .+.. -.+.
T Consensus 50 ~~~e~~~----~~~~~~~~gaD~VElRvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~-~~~~~~~~~l 124 (276)
T 3o1n_A 50 TITDVKS----EALAYREADFDILEWRVDHFANVTTAESVLEAAGAIREIITDKPLLFTFRSAKEGGEQ-ALTTGQYIDL 124 (276)
T ss_dssp SHHHHHH----HHHHHTTSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCCSSCEEEECCBGGGTCSB-CCCHHHHHHH
T ss_pred CHHHHHH----HHHHHhhCCCCEEEEEeccccccCcHHHHHHHHHHHHHhcCCCCEEEEEEEhhhCCCC-CCCHHHHHHH
Confidence 5555544 4555666889988 56776667778888888887644699999997643 3443 2321 1223
Q ss_pred HHHhhcCCCceEEEEcCCC-hhhhHHHHHHHHhh
Q 021144 234 ASIADSCEQVVAVGINCTS-PRFIHGLILSVRKV 266 (317)
Q Consensus 234 ~~~~~~~~~~~aiGvNC~~-p~~~~~~l~~l~~~ 266 (317)
.+.+.....++.|=|-=.. .+.+..+++..++.
T Consensus 125 l~~~l~~g~~dyIDvEl~~~~~~~~~l~~~a~~~ 158 (276)
T 3o1n_A 125 NRAAVDSGLVDMIDLELFTGDDEVKATVGYAHQH 158 (276)
T ss_dssp HHHHHHHTCCSEEEEEGGGCHHHHHHHHHHHHHT
T ss_pred HHHHHhcCCCCEEEEECcCCHHHHHHHHHHHHhC
Confidence 3332222226777776653 34555555554443
No 295
>1f8m_A Isocitrate lyase, ICL; alpha-beta barrel, helix-swapping, closed conformation, bromopyuvate modification, structural genomics; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.1.12.7 PDB: 1f61_A 1f8i_A
Probab=46.75 E-value=2e+02 Score=27.49 Aligned_cols=132 Identities=11% Similarity=0.055 Sum_probs=80.6
Q ss_pred HHHHHHHhCCCCEEEeccCC---------------CHHHHHHHHHHHHHhC--CCccEEEEEEEcCCCc-----------
Q 021144 172 RRVLILANSGADLIAFETIP---------------NKLEAKAYAELLEEEG--ITIPAWFSFNSKDGIN----------- 223 (317)
Q Consensus 172 ~qi~~l~~~gvD~l~~ET~p---------------~~~Ea~a~~~~~~~~~--~~~pv~iSf~~~~~~~----------- 223 (317)
+.++.++++||-.+-||-.. +.+|+..=+.+++..- .+.+++|--..+...-
T Consensus 167 ~tvk~~i~AGaaGi~IEDq~~~~KkCGH~~gk~lvp~~e~v~rI~AAr~A~~~~g~d~vIiARTDa~~a~li~s~~d~~d 246 (429)
T 1f8m_A 167 ELQKALIAAGVAGSHWEDQLASEKKCGHLGGKVLIPTQQHIRTLTSARLAADVADVPTVVIARTDAEAATLITSDVDERD 246 (429)
T ss_dssp HHHHHHHHTTCSEEEEECBCGGGCCCTTSSCCEECCHHHHHHHHHHHHHHHHHTTCCCEEEEEECTTTCCEESCCCSTTT
T ss_pred HHHHHHHHcCCEEEEEecCCCccccccCCCCCeeeCHHHHHHHHHHHHHHHHhcCCCEEEEEEechhhhccccccccccc
Confidence 35888999999999999653 2566554444443221 1356666555543210
Q ss_pred --------ccC-----CCcHHHHHHHhhc-CCCceEEEEcC-C-ChhhhHHHHHHHHhhCCCcEEEEeCCCCcccccccc
Q 021144 224 --------VVS-----GDSILECASIADS-CEQVVAVGINC-T-SPRFIHGLILSVRKVTSKPVIIYPNSGETYNAELKK 287 (317)
Q Consensus 224 --------l~~-----G~~l~~a~~~~~~-~~~~~aiGvNC-~-~p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~ 287 (317)
... ...+.+++..+.. ..++++|=+-. . .++.+..+.+.+.......+++|+.+.. -.
T Consensus 247 ~~fl~g~~~~eg~y~~~~gld~AI~Ra~AYa~gAD~if~e~~~~~~eei~~f~~~v~~~~P~~~La~n~sPs------f~ 320 (429)
T 1f8m_A 247 QPFITGERTREGFYRTKNGIEPCIARAKAYAPFADLIWMETGTPDLEAARQFSEAVKAEYPDQMLAYNCSPS------FN 320 (429)
T ss_dssp GGGEEEEECTTSCEEECCSHHHHHHHHHHHGGGCSEEEECCSSCCHHHHHHHHHHHHTTCTTCEEEEECCTT------SC
T ss_pred cccccCCCCcccccccccCHHHHHHHHHHHHhcCCEEEeCCCCCCHHHHHHHHHHhcccCCCceeecCCCCC------CC
Confidence 111 1458888866542 12678887753 3 5788888888886432222678876531 24
Q ss_pred ccccCCCChhhHHHHHHHHHHccc
Q 021144 288 WVVSFSLHFFPLELILNPFASCRL 311 (317)
Q Consensus 288 w~~~~~~~~~~~~~~~~~w~~~~~ 311 (317)
|... +++++...|..+..+.|+
T Consensus 321 w~~~--~~~~~~~~f~~eL~~lG~ 342 (429)
T 1f8m_A 321 WKKH--LDDATIAKFQKELAAMGF 342 (429)
T ss_dssp HHHH--CCHHHHHHHHHHHHHHTE
T ss_pred cccc--cchhhHhHHHHHHHHcCC
Confidence 5422 577888888888888886
No 296
>3r89_A Orotidine 5'-phosphate decarboxylase; PSI-biology, midwest center for structural genomics, MCSG, O 5-phosphate decarboxylase, lyase; 1.84A {Anaerococcus prevotii}
Probab=46.74 E-value=19 Score=32.86 Aligned_cols=109 Identities=12% Similarity=0.012 Sum_probs=69.4
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEE-----EeccCC--CHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHH
Q 021144 162 SLETLKEFHRRRVLILANSGADLI-----AFETIP--NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECA 234 (317)
Q Consensus 162 s~~el~~~h~~qi~~l~~~gvD~l-----~~ET~p--~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~ 234 (317)
..+.+.+|.+..++.+.+ -|.++ +||... -+.+++.+++.+++.+ .+|+.-+-+.|= |.+...++
T Consensus 41 ~~~~l~~f~~~ivd~l~~-~v~~~Kvg~~lf~~~G~~~v~~L~~~i~~~~~~g--~~VflDlK~~DI-----pnTv~~~a 112 (290)
T 3r89_A 41 VSEALFSYNKEIIDQTYD-VCAIYKLQIAYYESYGIEGMIAYRDTLSYLREKD--LLSIGDVKRSDI-----AASAKMYA 112 (290)
T ss_dssp HHHHHHHHHHHHHHHHTT-SCSEEEEEHHHHHTTHHHHHHHHHHHHHHHHHTT--CCEEEEEEECCC-----HHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCC-cceEEEecHHHHHhcCHHHHHHHHHHHHHHHHCC--CeEEEEecccCc-----HHHHHHHH
Confidence 367788888988888864 35444 344321 2345555667777765 899988887653 44566666
Q ss_pred HHhhc-CCCceEEEEcCC-ChhhhHHHHHHHHhhCCCc--EEEEeCCC
Q 021144 235 SIADS-CEQVVAVGINCT-SPRFIHGLILSVRKVTSKP--VIIYPNSG 278 (317)
Q Consensus 235 ~~~~~-~~~~~aiGvNC~-~p~~~~~~l~~l~~~~~~p--l~vyPNaG 278 (317)
+.+.. ..+++++-+++. +++.|.++++...+..+.. |.-.-|.|
T Consensus 113 ~~~~~~~lg~D~vTvh~~~G~~~l~~~~~~a~~~~kgv~vL~~tSn~g 160 (290)
T 3r89_A 113 KAHFEGDFETDFITLNPYMGMDSIEPYEEYIEKGDKGVFVLLRTSNPG 160 (290)
T ss_dssp HHHHSGGGCCSEEEECCTTCGGGTGGGHHHHHTTSCEEEEEEECCSGG
T ss_pred HHHhccccCCCEEEEcccCCHHHHHHHHHHHHhcCCeEEEEEeCCCCC
Confidence 55443 147899999997 6777888887766543333 23344544
No 297
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=46.70 E-value=1.6e+02 Score=26.44 Aligned_cols=195 Identities=11% Similarity=0.048 Sum_probs=98.9
Q ss_pred ChHHHHHHHHHHHHhhccccc-cccccccHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCC
Q 021144 53 SPHLVRKVHLDYLDAGANIII-TASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (317)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~-TnTy~as~~~l~~~g~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (317)
+.+.+++.-+.++++|++-|. .-|-+=. .-++.+|-.++++.+++.+ +
T Consensus 27 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~------~~Lt~~Er~~v~~~~v~~~-------------------------g 75 (313)
T 3dz1_A 27 DDVSIDRLTDFYAEVGCEGVTVLGILGEA------PKLDAAEAEAVATRFIKRA-------------------------K 75 (313)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESTGGGTG------GGSCHHHHHHHHHHHHHHC-------------------------T
T ss_pred CHHHHHHHHHHHHHCCCCEEEeCccCcCh------hhCCHHHHHHHHHHHHHHc-------------------------C
Confidence 456788888888999999544 3333311 1245566667776665533 1
Q ss_pred CCeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEecc---CCCHHHHHHHHHHHHHhC-
Q 021144 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFET---IPNKLEAKAYAELLEEEG- 207 (317)
Q Consensus 132 ~~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~ET---~p~~~Ea~a~~~~~~~~~- 207 (317)
+-+.|+| +|. .+.++..+ +++...+.|+|.+++=+ .++.+++..-.+.+.+..
T Consensus 76 rvpViaG-vg~------------------~~t~~ai~----la~~A~~~Gadavlv~~P~~~~s~~~l~~~f~~va~a~~ 132 (313)
T 3dz1_A 76 SMQVIVG-VSA------------------PGFAAMRR----LARLSMDAGAAGVMIAPPPSLRTDEQITTYFRQATEAIG 132 (313)
T ss_dssp TSEEEEE-CCC------------------SSHHHHHH----HHHHHHHHTCSEEEECCCTTCCSHHHHHHHHHHHHHHHC
T ss_pred CCcEEEe-cCC------------------CCHHHHHH----HHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHhCC
Confidence 2346676 332 14444444 45556668999998732 246666666666555442
Q ss_pred CCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEc--CC-ChhhhHHHHHHHHhhCCCcEEEEeCC-CCcccc
Q 021144 208 ITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGIN--CT-SPRFIHGLILSVRKVTSKPVIIYPNS-GETYNA 283 (317)
Q Consensus 208 ~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvN--C~-~p~~~~~~l~~l~~~~~~pl~vyPNa-G~~~d~ 283 (317)
.++|+++= .+. +++.-.-+++...+.+++.++ .+||- |+ ....+..+++.........+.+|.=. ......
T Consensus 133 ~~lPiilY-n~P--~~tg~~l~~~~~~~La~~~pn--IvgiKd~~~~~~~~~~~~~~~~~~~~~~~f~v~~G~d~~~l~~ 207 (313)
T 3dz1_A 133 DDVPWVLQ-DYP--LTLSVVMTPKVIRQIVMDSAS--CVMLKHEDWPGLEKITTLRGFQKDGSLRPLSILCGNGGLFLDF 207 (313)
T ss_dssp TTSCEEEE-ECH--HHHCCCCCHHHHHHHHHHCSS--EEEEEECCSSCHHHHHHHHHHHHHTSSCCCEEEECGGGTTHHH
T ss_pred CCCcEEEE-eCc--cccCcCCCHHHHHHHHHhCCC--EEEEEcCCCCCHHHHHHHHHhcCccCCCCeEEEeCCcHHHHHH
Confidence 23898842 121 222222344444444433344 55666 44 34555555554432111234444322 221111
Q ss_pred ----ccccccccCCCChhhHHHHHHHHH
Q 021144 284 ----ELKKWVVSFSLHFFPLELILNPFA 307 (317)
Q Consensus 284 ----~~~~w~~~~~~~~~~~~~~~~~w~ 307 (317)
....|... ..-|+.+.+..+.|.
T Consensus 208 ~l~~G~~G~i~~-~~~P~~~~~l~~a~~ 234 (313)
T 3dz1_A 208 EMERGADGAMTG-YCFPDMLVDVVKLSK 234 (313)
T ss_dssp HHHHTCCEEEEC-CSCHHHHHHHHHHHH
T ss_pred HHHCCCcEEEeC-cccHHHHHHHHHHHH
Confidence 11223322 245777776665553
No 298
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=46.35 E-value=88 Score=27.60 Aligned_cols=64 Identities=23% Similarity=0.245 Sum_probs=44.5
Q ss_pred HHHHHHhCCCCEEEec-cCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCC-CceEEEEcC
Q 021144 173 RVLILANSGADLIAFE-TIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCE-QVVAVGINC 250 (317)
Q Consensus 173 qi~~l~~~gvD~l~~E-T~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~-~~~aiGvNC 250 (317)
|+......|+|.+++= ++-+..+++.+++.+++.+ +-+++-+. +.+++...+. . +++.||+|=
T Consensus 115 qi~ea~~~GAD~ilLi~a~l~~~~l~~l~~~a~~lG--l~~lvEv~-----------~~eE~~~A~~--l~g~~iIGinn 179 (251)
T 1i4n_A 115 QVKLASSVGADAILIIARILTAEQIKEIYEAAEELG--MDSLVEVH-----------SREDLEKVFS--VIRPKIIGINT 179 (251)
T ss_dssp HHHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHTTT--CEEEEEEC-----------SHHHHHHHHT--TCCCSEEEEEC
T ss_pred HHHHHHHcCCCEEEEecccCCHHHHHHHHHHHHHcC--CeEEEEeC-----------CHHHHHHHHh--cCCCCEEEEeC
Confidence 4555667999998665 5546678888888888865 66665551 3455554443 4 789999998
Q ss_pred C
Q 021144 251 T 251 (317)
Q Consensus 251 ~ 251 (317)
.
T Consensus 180 r 180 (251)
T 1i4n_A 180 R 180 (251)
T ss_dssp B
T ss_pred c
Confidence 4
No 299
>4ed9_A CAIB/BAIF family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; HET: NHE; 1.95A {Brucella suis}
Probab=46.24 E-value=29 Score=32.71 Aligned_cols=40 Identities=20% Similarity=0.294 Sum_probs=24.9
Q ss_pred cCCChHHHHHHHHHHHHhhccccccccccccHHHHHhCCCCHHHH
Q 021144 50 LVSSPHLVRKVHLDYLDAGANIIITASYQATIQGFEAKGFSTEEA 94 (317)
Q Consensus 50 ll~~Pe~V~~iH~~Yl~AGAdiI~TnTy~as~~~l~~~g~~~~~~ 94 (317)
.+.+|+-.+.+++ |-+.|||+++| |+ +..+.+.|++.+..
T Consensus 81 DLk~~~Gr~~l~~--Lv~~ADV~ien-fr--Pg~~~rlGl~ye~L 120 (385)
T 4ed9_A 81 DFRTEEGRELVRR--LVAEADVVIEN-FK--LGGLDKYGLDYESL 120 (385)
T ss_dssp CTTSHHHHHHHHH--HHHTCSEEEEC-CC--TTTTGGGTCSHHHH
T ss_pred cCCCHHHHHHHHH--HHHhCCEEEEC-CC--ccHHHHhCCCHHHH
Confidence 3566765444432 34679999999 44 34466679986544
No 300
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=46.03 E-value=1.8e+02 Score=26.78 Aligned_cols=65 Identities=2% Similarity=-0.122 Sum_probs=41.4
Q ss_pred HHHHHHHhC--CCCEEEeccC-CCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEE
Q 021144 172 RRVLILANS--GADLIAFETI-PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGI 248 (317)
Q Consensus 172 ~qi~~l~~~--gvD~l~~ET~-p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGv 248 (317)
++++.+++. |+|++.+.+- .+.......++.+++..+++|+++.. ..+.+++....+ .++++|-+
T Consensus 121 ~~~~~l~~~~~g~~~i~i~~~~g~~~~~~~~i~~lr~~~~~~~vi~g~----------v~t~e~A~~a~~--aGaD~I~v 188 (351)
T 2c6q_A 121 EQLEQILEAIPQVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGN----------VVTGEMVEELIL--SGADIIKV 188 (351)
T ss_dssp HHHHHHHHHCTTCCEEEEECSCTTBHHHHHHHHHHHHHCTTSEEEEEE----------ECSHHHHHHHHH--TTCSEEEE
T ss_pred HHHHHHHhccCCCCEEEEEecCCCcHHHHHHHHHHHHhcCCCeEEEEe----------CCCHHHHHHHHH--hCCCEEEE
Confidence 467777775 9999887643 23344555666677653358888543 335677776665 47787755
No 301
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=45.81 E-value=1e+02 Score=27.94 Aligned_cols=151 Identities=16% Similarity=0.077 Sum_probs=70.6
Q ss_pred CeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEec---cCCC------HHHHHHHHHHH
Q 021144 133 PVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFE---TIPN------KLEAKAYAELL 203 (317)
Q Consensus 133 ~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~E---T~p~------~~Ea~a~~~~~ 203 (317)
+++|-|=|-=+.+...||..|. +.+.+.+ +++.+++.|+|+|=+- |-|. -+|++-++.++
T Consensus 22 ~~~iMgilNvTPDSFsdgg~~~-------~~~~a~~----~a~~~v~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi 90 (294)
T 2y5s_A 22 RPLVMGILNATPDSFSDGGRFL-------ARDDALR----RAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLV 90 (294)
T ss_dssp SCEEEEEEECCC-----------------CTTHHHH----HHHHHHHTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHH
T ss_pred CceEEEEEeCCCCCCCCCCCcC-------CHHHHHH----HHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHH
Confidence 3578888877777777775542 3334433 5667888999999554 3344 66666666555
Q ss_pred HHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCCChhhhHHHHHHHHhhCCCcEEEEeCCCCcccc
Q 021144 204 EEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPRFIHGLILSVRKVTSKPVIIYPNSGETYNA 283 (317)
Q Consensus 204 ~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~~p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~ 283 (317)
+.... ..+.+|+- -...+-+-+.++. ++.. ||=.+.......++.++ ..+.|+++.++.|.+-+-
T Consensus 91 ~~l~~-~~vpiSID---------T~~~~Va~aAl~a--Ga~i--INdVsg~~d~~m~~~~a-~~~~~vVlmh~~G~p~tm 155 (294)
T 2y5s_A 91 EALRP-LNVPLSID---------TYKPAVMRAALAA--GADL--INDIWGFRQPGAIDAVR-DGNSGLCAMHMLGEPQTM 155 (294)
T ss_dssp HHHGG-GCSCEEEE---------CCCHHHHHHHHHH--TCSE--EEETTTTCSTTHHHHHS-SSSCEEEEECCCEETTTT
T ss_pred HHHhh-CCCeEEEE---------CCCHHHHHHHHHc--CCCE--EEECCCCCchHHHHHHH-HhCCCEEEECCCCCCccc
Confidence 54321 13344552 1222222222332 3222 44432111223333333 357899999998754221
Q ss_pred ccccccccCCCC-----hhhHHHHHHHHHHcccc
Q 021144 284 ELKKWVVSFSLH-----FFPLELILNPFASCRLI 312 (317)
Q Consensus 284 ~~~~w~~~~~~~-----~~~~~~~~~~w~~~~~~ 312 (317)
... ...|+ + -+.+.+.+....+.|+=
T Consensus 156 ~~~--~~~y~-dv~~ev~~~l~~~i~~a~~~Gi~ 186 (294)
T 2y5s_A 156 QVG--EPDYG-DVVTDVRDFLAARAQALRDAGVA 186 (294)
T ss_dssp EEC--CCCCS-SHHHHHHHHHHHHHHHHHHTTCC
T ss_pred ccc--CCccc-cHHHHHHHHHHHHHHHHHHcCCC
Confidence 000 01121 1 23455566666677753
No 302
>3vab_A Diaminopimelate decarboxylase 1; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: LLP; 2.10A {Brucella melitensis BV}
Probab=45.59 E-value=2e+02 Score=27.22 Aligned_cols=69 Identities=17% Similarity=0.099 Sum_probs=42.4
Q ss_pred hCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCC---------C--cccCCCcHHH---HHHHhhcCCCce
Q 021144 179 NSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDG---------I--NVVSGDSILE---CASIADSCEQVV 244 (317)
Q Consensus 179 ~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~---------~--~l~~G~~l~~---a~~~~~~~~~~~ 244 (317)
+.|+..+.++ +..|++.+.+++++.+...+|++-+....+ | .-+-|.++++ +++.+....++.
T Consensus 138 ~~gv~~~~vd---s~~el~~l~~~a~~~~~~~~V~lRVn~~~~~~~~~~i~tG~~~sRfGi~~~e~~~ll~~~~~~~~l~ 214 (443)
T 3vab_A 138 EAGIYCFNVE---SEPELEILSARAVAAGKVAPVSLRINPDVDAKTHAKISTGKSENKFGIPRDKARAAYARAASLPGLN 214 (443)
T ss_dssp HHTCSEEEEC---CHHHHHHHHHHHHHHTCCEEEEEEEECCBCTTTCCBC---CCCCSSSEEGGGHHHHHHHHHHSTTEE
T ss_pred HCCCCEEEEC---CHHHHHHHHHHHHhcCCCceEEEEECCCCCCCCCcccccCCCCCCCcCCHHHHHHHHHHHhhCCCce
Confidence 3577755554 788999888888877645677777754310 1 1234555444 444444445677
Q ss_pred EEEEcC
Q 021144 245 AVGINC 250 (317)
Q Consensus 245 aiGvNC 250 (317)
..|+-|
T Consensus 215 l~Glh~ 220 (443)
T 3vab_A 215 VVGIDM 220 (443)
T ss_dssp EEEEEC
T ss_pred EEEEEE
Confidence 888877
No 303
>3niy_A Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.58A {Thermotoga petrophila rku-1} SCOP: c.1.8.3 PDB: 3nj3_A* 1vbr_A* 1vbu_A
Probab=45.57 E-value=1.8e+02 Score=26.65 Aligned_cols=47 Identities=19% Similarity=0.205 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHhCC--CCEEEeccC-----CCHHHHHHHHHHHHHhCCCccEEEEE
Q 021144 168 EFHRRRVLILANSG--ADLIAFETI-----PNKLEAKAYAELLEEEGITIPAWFSF 216 (317)
Q Consensus 168 ~~h~~qi~~l~~~g--vD~l~~ET~-----p~~~Ea~a~~~~~~~~~~~~pv~iSf 216 (317)
+.+...++.|.+.| +|.|-+..- +...+++..++.+.+.+ +||+||=
T Consensus 203 ~~~~~lv~~l~~~GvpIdgIG~Q~H~~~~~~~~~~~~~~l~~~a~lG--l~v~iTE 256 (341)
T 3niy_A 203 NFVYNMIKELKEKGVPVDGIGFQMHIDYRGLNYDSFRRNLERFAKLG--LQIYITE 256 (341)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEEETTCCCHHHHHHHHHHHHHTT--CEEEEEE
T ss_pred HHHHHHHHHHHHCCCCcceEeeeeecCCCCCCHHHHHHHHHHHHHcC--CeEEEEe
Confidence 45566888888877 598877642 23578888888888776 9999874
No 304
>3ubm_A COAT2, formyl-COA:oxalate COA-transferase; HET: COA; 1.99A {Acetobacter aceti}
Probab=45.46 E-value=41 Score=32.52 Aligned_cols=40 Identities=18% Similarity=0.158 Sum_probs=25.6
Q ss_pred cCCChHHHHHHHHHHHHhhccccccccccccHHHHHhCCCCHHHH
Q 021144 50 LVSSPHLVRKVHLDYLDAGANIIITASYQATIQGFEAKGFSTEEA 94 (317)
Q Consensus 50 ll~~Pe~V~~iH~~Yl~AGAdiI~TnTy~as~~~l~~~g~~~~~~ 94 (317)
.+..|+-.+.+++ |-+.|||+++| |+ +..+.+.|++.+.+
T Consensus 99 DLk~~eGr~~l~~--Li~~ADVvven-fR--PG~~erlGL~ye~L 138 (456)
T 3ubm_A 99 NTKTPEGKAVFEK--CIKWADILLEN-FR--PGAMERMGFTWEYL 138 (456)
T ss_dssp CTTSHHHHHHHHH--HHHHCSEEEEC-CS--TTHHHHTTCCHHHH
T ss_pred eCCCHHHHHHHHH--HHHhCCEEEEC-CC--ccHHHHhCCCHHHH
Confidence 4567765444332 33569999998 44 44577789986544
No 305
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=45.07 E-value=1.3e+02 Score=24.75 Aligned_cols=92 Identities=12% Similarity=0.042 Sum_probs=51.4
Q ss_pred HHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCC--
Q 021144 174 VLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCT-- 251 (317)
Q Consensus 174 i~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~-- 251 (317)
++.+.+.|+|++.+=-.+...+++.+++.+++.+ +++.+++. +=+++.+.++.+.. .+++.|++--+
T Consensus 70 ~~~a~~~Gad~v~vh~~~~~~~~~~~~~~~~~~g--~~~gv~~~--------s~~~p~~~~~~~~~-~g~d~v~~~~~~~ 138 (207)
T 3ajx_A 70 ADIAFKAGADLVTVLGSADDSTIAGAVKAAQAHN--KGVVVDLI--------GIEDKATRAQEVRA-LGAKFVEMHAGLD 138 (207)
T ss_dssp HHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHT--CEEEEECT--------TCSSHHHHHHHHHH-TTCSEEEEECCHH
T ss_pred HHHHHhCCCCEEEEeccCChHHHHHHHHHHHHcC--CceEEEEe--------cCCChHHHHHHHHH-hCCCEEEEEeccc
Confidence 3567779999998655555566777888888765 56555441 11134443333333 25677755322
Q ss_pred ----ChhhhHHHHHHHHhhCCCcEEEEeCC
Q 021144 252 ----SPRFIHGLILSVRKVTSKPVIIYPNS 277 (317)
Q Consensus 252 ----~p~~~~~~l~~l~~~~~~pl~vyPNa 277 (317)
+.....+.++++... +.|+++-+.-
T Consensus 139 ~~~~g~~~~~~~i~~~~~~-~~pi~v~GGI 167 (207)
T 3ajx_A 139 EQAKPGFDLNGLLAAGEKA-RVPFSVAGGV 167 (207)
T ss_dssp HHTSTTCCTHHHHHHHHHH-TSCEEEESSC
T ss_pred ccccCCCchHHHHHHhhCC-CCCEEEECCc
Confidence 111111445555443 6788777644
No 306
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=45.07 E-value=2.1e+02 Score=27.22 Aligned_cols=63 Identities=8% Similarity=0.047 Sum_probs=44.5
Q ss_pred HHHHHHHHHhCCCCEEEec-cC--CCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhc
Q 021144 170 HRRRVLILANSGADLIAFE-TI--PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADS 239 (317)
Q Consensus 170 h~~qi~~l~~~gvD~l~~E-T~--p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~ 239 (317)
+.+.++.+.+.|+|.|.+= |+ ....++..+++.+++.. ++.+++-+.++ .|..+..++..+..
T Consensus 182 ~~~v~~~~~~~Ga~~i~l~DTvG~~~P~~v~~lv~~l~~~~---~~~i~~H~Hnd----~GlAvAN~laAv~a 247 (423)
T 3ivs_A 182 LLSLYKAVDKIGVNRVGIADTVGCATPRQVYDLIRTLRGVV---SCDIECHFHND----TGMAIANAYCALEA 247 (423)
T ss_dssp HHHHHHHHHHHCCSEEEEEETTSCCCHHHHHHHHHHHHHHC---SSEEEEEEBCT----TSCHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCccccCCccCcCCHHHHHHHHHHHHhhc---CCeEEEEECCC----CchHHHHHHHHHHh
Confidence 4556777888999988554 44 35778888888888743 45678888765 47777777766653
No 307
>1u1j_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; methionine, synthase, methyltetrahydrofolate; HET: C2F; 2.40A {Arabidopsis thaliana} SCOP: c.1.22.2 c.1.22.2 PDB: 1u1h_A* 1u1u_A 1u22_A*
Probab=45.05 E-value=1.3e+02 Score=30.93 Aligned_cols=80 Identities=18% Similarity=0.172 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHHHHHhCCCCEEEe-ccC----CCHHHHHHHHHHHHHhC---CCccEEEEEEEcCCCcccCCCcHH-HH
Q 021144 163 LETLKEFHRRRVLILANSGADLIAF-ETI----PNKLEAKAYAELLEEEG---ITIPAWFSFNSKDGINVVSGDSIL-EC 233 (317)
Q Consensus 163 ~~el~~~h~~qi~~l~~~gvD~l~~-ET~----p~~~Ea~a~~~~~~~~~---~~~pv~iSf~~~~~~~l~~G~~l~-~a 233 (317)
.+.+.+.|++.++.|.++|++.|-| |.. .+.+...++..+++... .+.++++...+. ++. +.
T Consensus 181 l~~L~~~y~~~l~~L~~aG~~~VQiDEP~L~~~l~~~~~~~~~~a~~~l~~~~~~~~i~lhtc~G---------~~~~~~ 251 (765)
T 1u1j_A 181 LPKILPIYKEVITELKAAGATWIQLDEPVLVMDLEGQKLQAFTGAYAELESTLSGLNVLVETYFA---------DIPAEA 251 (765)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEECGGGGSCCCHHHHHHHHHHHHHSTTTTCSSEEEEECCSS---------CCCHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEcCCccccCCCHHHHHHHHHHHHHHHhhcCCCeEEEEeCCC---------CcchHH
Confidence 5789999999999999999998743 421 22233344445555542 145565544332 122 45
Q ss_pred HHHhhcCCC-ceEEEEcCCC
Q 021144 234 ASIADSCEQ-VVAVGINCTS 252 (317)
Q Consensus 234 ~~~~~~~~~-~~aiGvNC~~ 252 (317)
+..+.+ .+ +++|++-+..
T Consensus 252 ~~~l~~-l~~vd~l~lD~v~ 270 (765)
T 1u1j_A 252 YKTLTS-LKGVTAFGFDLVR 270 (765)
T ss_dssp HHHHTT-CTTCCEEEEESSS
T ss_pred HHHHHc-CCCCcEEEEEecC
Confidence 556654 46 9999999874
No 308
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=44.63 E-value=1.4e+02 Score=27.26 Aligned_cols=91 Identities=12% Similarity=-0.048 Sum_probs=57.0
Q ss_pred HHHHHHhCCCCEEEeccCC--------------CHHHHH----HHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHH
Q 021144 173 RVLILANSGADLIAFETIP--------------NKLEAK----AYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECA 234 (317)
Q Consensus 173 qi~~l~~~gvD~l~~ET~p--------------~~~Ea~----a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~ 234 (317)
-++.|.++||+.+-+|-.. +.+|+. +++++.++.+ .+++|--..+. .. ...+.+++
T Consensus 108 ~v~~l~~aGaagv~iEDq~~~k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~--~d~~I~ARTDa--~~--~~gldeAi 181 (307)
T 3lye_A 108 TVEHYIRSGVAGAHLEDQILTKRCGHLSGKKVVSRDEYLVRIRAAVATKRRLR--SDFVLIARTDA--LQ--SLGYEECI 181 (307)
T ss_dssp HHHHHHHTTCCEEEECCBCCCC--------CBCCHHHHHHHHHHHHHHHHHTT--CCCEEEEEECC--HH--HHCHHHHH
T ss_pred HHHHHHHcCCeEEEEcCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcC--CCeEEEEechh--hh--ccCHHHHH
Confidence 4777888999999999642 455643 3444333333 56666555432 22 23477777
Q ss_pred HHhhc--CCCceEEEEcCC-ChhhhHHHHHHHHhhCCCcEE
Q 021144 235 SIADS--CEQVVAVGINCT-SPRFIHGLILSVRKVTSKPVI 272 (317)
Q Consensus 235 ~~~~~--~~~~~aiGvNC~-~p~~~~~~l~~l~~~~~~pl~ 272 (317)
+.+.. ..++++|=+-|. +++.+..+.+.+. +.|++
T Consensus 182 ~Ra~ay~eAGAD~ifi~~~~~~~~~~~i~~~~~---~~Pv~ 219 (307)
T 3lye_A 182 ERLRAARDEGADVGLLEGFRSKEQAAAAVAALA---PWPLL 219 (307)
T ss_dssp HHHHHHHHTTCSEEEECCCSCHHHHHHHHHHHT---TSCBE
T ss_pred HHHHHHHHCCCCEEEecCCCCHHHHHHHHHHcc---CCcee
Confidence 66542 258899999986 5677777776664 35653
No 309
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=44.49 E-value=1.6e+02 Score=28.08 Aligned_cols=84 Identities=11% Similarity=0.107 Sum_probs=49.8
Q ss_pred HHHHHHHHHH-hCCCCEEEeccC-------CCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcC
Q 021144 169 FHRRRVLILA-NSGADLIAFETI-------PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSC 240 (317)
Q Consensus 169 ~h~~qi~~l~-~~gvD~l~~ET~-------p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~ 240 (317)
.|++.++.++ +.+||.+++--. .+...+..+++++++...++|+++++. .|+...+..+.+.+
T Consensus 355 ~~~~al~~~l~dp~vd~vlv~~~~~~~Gg~~~~~~a~~i~~al~~~~~~kPvvv~~~--------~g~~~~~~~~~L~~- 425 (457)
T 2csu_A 355 DYYRTAKLLLQDPNVDMLIAICVVPTFAGMTLTEHAEGIIRAVKEVNNEKPVLAMFM--------AGYVSEKAKELLEK- 425 (457)
T ss_dssp HHHHHHHHHHHSTTCSEEEEEEECCCSTTCCSSHHHHHHHHHHHHHCCCCCEEEEEE--------CTTTTHHHHHHHHT-
T ss_pred HHHHHHHHHhcCCCCCEEEEEccccccccCCchhHHHHHHHHHHHhcCCCCEEEEeC--------CCcchHHHHHHHHh-
Confidence 4555666665 478999987432 113445677777777433589988662 24445667777765
Q ss_pred CCceEEEEcCCChhhhHHHHHHHHh
Q 021144 241 EQVVAVGINCTSPRFIHGLILSVRK 265 (317)
Q Consensus 241 ~~~~aiGvNC~~p~~~~~~l~~l~~ 265 (317)
.++-.+ ..|+.....+..+.+
T Consensus 426 ~Gip~~----~spe~Av~al~~l~~ 446 (457)
T 2csu_A 426 NGIPTY----ERPEDVASAAYALVE 446 (457)
T ss_dssp TTCCEE----SSHHHHHHHHHHHHH
T ss_pred CCCCcc----CCHHHHHHHHHHHHH
Confidence 343333 467666555555443
No 310
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=44.26 E-value=63 Score=28.07 Aligned_cols=103 Identities=14% Similarity=0.157 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCEEEeccCCC-----HHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhh
Q 021144 164 ETLKEFHRRRVLILANSGADLIAFETIPN-----KLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIAD 238 (317)
Q Consensus 164 ~el~~~h~~qi~~l~~~gvD~l~~ET~p~-----~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~ 238 (317)
+.+.+..++.++...+.||. |++|+.+. ..++..+ +++.+ .| .+.++++-......|.++.+.++.+.
T Consensus 143 ~~~~~~l~~l~~~a~~~Gv~-l~lEn~~~~~~~~~~~~~~l---~~~v~--~~-~vg~~~D~~h~~~~g~d~~~~l~~~~ 215 (295)
T 3cqj_A 143 RRFRDGLKESVEMASRAQVT-LAMEIMDYPLMNSISKALGY---AHYLN--NP-WFQLYPDIGNLSAWDNDVQMELQAGI 215 (295)
T ss_dssp HHHHHHHHHHHHHHHHHTCE-EEEECCSSGGGCSHHHHHHH---HHHHC--CT-TEEEECBHHHHHSSSCCHHHHHHHTG
T ss_pred HHHHHHHHHHHHHHHHhCCE-EEEeeCCCcccCCHHHHHHH---HHhcC--CC-CeEEEeccchHhhcCCCHHHHHHHhc
Confidence 44555555555555567886 56799764 4555444 44444 23 23444433222345778877777653
Q ss_pred cCCCceEE-----------EEcCC-ChhhhHHHHHHHHhhC-CCcEEEEe
Q 021144 239 SCEQVVAV-----------GINCT-SPRFIHGLILSVRKVT-SKPVIIYP 275 (317)
Q Consensus 239 ~~~~~~ai-----------GvNC~-~p~~~~~~l~~l~~~~-~~pl~vyP 275 (317)
. .+..| .+... +.-....+++.+++.. +.++++-.
T Consensus 216 ~--~i~~vHl~D~~~g~~~~~p~G~G~id~~~~~~~L~~~gy~g~i~lE~ 263 (295)
T 3cqj_A 216 G--HIVAVHVKDTKPGVFKNVPFGEGVVDFERCFETLKQSGYCGPYLIEM 263 (295)
T ss_dssp G--GBCCEEECEEETTEEEEECTTSSSCCHHHHHHHHHHTTCCSCEEECC
T ss_pred c--ceEEEEeecCCCCccCCcCCCCCccCHHHHHHHHHHCCCceeEEEEe
Confidence 2 11111 12222 2223566777776642 45666653
No 311
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=44.26 E-value=1.7e+02 Score=26.07 Aligned_cols=191 Identities=15% Similarity=0.096 Sum_probs=100.5
Q ss_pred ChHHHHHHHHHHHHhhccccccc-cccccHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCC
Q 021144 53 SPHLVRKVHLDYLDAGANIIITA-SYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (317)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~Tn-Ty~as~~~l~~~g~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (317)
+.+.+++.-+.++++|.+-|..+ |-+ +. .-++.+|-.++++.+++.+. +
T Consensus 23 D~~~l~~lv~~li~~Gv~gl~v~GttG---E~---~~Ls~~Er~~v~~~~~~~~~------------------------g 72 (300)
T 3eb2_A 23 RADVMGRLCDDLIQAGVHGLTPLGSTG---EF---AYLGTAQREAVVRATIEAAQ------------------------R 72 (300)
T ss_dssp CHHHHHHHHHHHHHTTCSCBBTTSGGG---TG---GGCCHHHHHHHHHHHHHHHT------------------------T
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcccc---Cc---cccCHHHHHHHHHHHHHHhC------------------------C
Confidence 45678888888899999965433 322 11 13466667777777665542 2
Q ss_pred CCeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEecc----CCCHHHHHHHHHHHHHhC
Q 021144 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFET----IPNKLEAKAYAELLEEEG 207 (317)
Q Consensus 132 ~~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~ET----~p~~~Ea~a~~~~~~~~~ 207 (317)
+-+.|+| +|.. +.++..+ +++...+.|+|.+++=+ -|+.+++..-.+.+.+..
T Consensus 73 rvpviaG-vg~~------------------~t~~ai~----la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~ 129 (300)
T 3eb2_A 73 RVPVVAG-VAST------------------SVADAVA----QAKLYEKLGADGILAILEAYFPLKDAQIESYFRAIADAV 129 (300)
T ss_dssp SSCBEEE-EEES------------------SHHHHHH----HHHHHHHHTCSEEEEEECCSSCCCHHHHHHHHHHHHHHC
T ss_pred CCcEEEe-CCCC------------------CHHHHHH----HHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHHC
Confidence 2345666 3321 3344433 45566678999998753 246777776666665543
Q ss_pred CCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCCC--hhhhHHHHHHHHhhCCCcEEEEe-CCCCccc--
Q 021144 208 ITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTS--PRFIHGLILSVRKVTSKPVIIYP-NSGETYN-- 282 (317)
Q Consensus 208 ~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~~--p~~~~~~l~~l~~~~~~pl~vyP-NaG~~~d-- 282 (317)
++|+++== +. +++--.-+++...+ +.+.++ .+||--++ ...+..+++... ..+.+|. +-....+
T Consensus 130 -~lPiilYn-~P--~~tg~~l~~~~~~~-La~~pn--IvgiKdssgd~~~~~~~~~~~~----~~f~v~~G~d~~~~~~l 198 (300)
T 3eb2_A 130 -EIPVVIYT-NP--QFQRSDLTLDVIAR-LAEHPR--IRYIKDASTNTGRLLSIINRCG----DALQVFSASAHIPAAVM 198 (300)
T ss_dssp -SSCEEEEE-CT--TTCSSCCCHHHHHH-HHTSTT--EEEEEECSSBHHHHHHHHHHHG----GGSEEEECTTSCHHHHH
T ss_pred -CCCEEEEE-Cc--cccCCCCCHHHHHH-HHcCCC--EEEEEcCCCCHHHHHHHHHHcC----CCeEEEeCcHHHHHHHH
Confidence 59988432 21 22222234443433 444344 56666653 445555554332 1233443 2221111
Q ss_pred -ccccccccc-CCCChhhHHHHHHHHH
Q 021144 283 -AELKKWVVS-FSLHFFPLELILNPFA 307 (317)
Q Consensus 283 -~~~~~w~~~-~~~~~~~~~~~~~~w~ 307 (317)
.....|... ...-|+.+.+..+.|.
T Consensus 199 ~~G~~G~is~~an~~P~~~~~l~~a~~ 225 (300)
T 3eb2_A 199 LIGGVGWMAGPACIAPRQSVALYELCK 225 (300)
T ss_dssp HTTCCEEEEGGGGTCHHHHHHHHHHHH
T ss_pred hCCCCEEEeChhhhhHHHHHHHHHHHH
Confidence 112233322 2356777777666553
No 312
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=44.13 E-value=1.4e+02 Score=25.02 Aligned_cols=91 Identities=10% Similarity=0.072 Sum_probs=50.7
Q ss_pred HHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEE-EEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCC-
Q 021144 174 VLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWF-SFNSKDGINVVSGDSILECASIADSCEQVVAVGINCT- 251 (317)
Q Consensus 174 i~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~i-Sf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~- 251 (317)
++.+.++|+|++.+=..+..+.++.+++.+++.+ +++.+ .+. -.| .+++..... .+++.+++--+
T Consensus 76 ~~~~~~aGad~i~vh~~~~~~~~~~~~~~~~~~g--~~~~~d~l~--------~~T-~~~~~~~~~--~g~d~v~~~~~~ 142 (218)
T 3jr2_A 76 SRMAFEAGADWITVSAAAHIATIAACKKVADELN--GEIQIEIYG--------NWT-MQDAKAWVD--LGITQAIYHRSR 142 (218)
T ss_dssp HHHHHHHTCSEEEEETTSCHHHHHHHHHHHHHHT--CEEEEECCS--------SCC-HHHHHHHHH--TTCCEEEEECCH
T ss_pred HHHHHhcCCCEEEEecCCCHHHHHHHHHHHHHhC--Cccceeeee--------cCC-HHHHHHHHH--cCccceeeeecc
Confidence 4667789999999887776555678888888876 44433 111 123 345554443 26676655211
Q ss_pred Chh-----hhHHHHHHHHhh--CCCcEEEEeCC
Q 021144 252 SPR-----FIHGLILSVRKV--TSKPVIIYPNS 277 (317)
Q Consensus 252 ~p~-----~~~~~l~~l~~~--~~~pl~vyPNa 277 (317)
.|. .....++.+++. .+.|+.+=+.-
T Consensus 143 ~~~~~g~~~~~~~l~~i~~~~~~~~pi~v~GGI 175 (218)
T 3jr2_A 143 DAELAGIGWTTDDLDKMRQLSALGIELSITGGI 175 (218)
T ss_dssp HHHHHTCCSCHHHHHHHHHHHHTTCEEEEESSC
T ss_pred ccccCCCcCCHHHHHHHHHHhCCCCCEEEECCC
Confidence 111 122334444443 36777766543
No 313
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=44.10 E-value=1.9e+02 Score=26.43 Aligned_cols=117 Identities=15% Similarity=0.050 Sum_probs=52.8
Q ss_pred CeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEec---c-----CCCHHHHHHH---HH
Q 021144 133 PVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFE---T-----IPNKLEAKAY---AE 201 (317)
Q Consensus 133 ~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~E---T-----~p~~~Ea~a~---~~ 201 (317)
+.+|.|=|=-+.+...||..|. +.+++.+ +++.+++.|+|+|=+- | ++.-+|++-+ ++
T Consensus 41 ~~~vMGIlNvTPDSFsdgg~~~-------~~~~a~~----~A~~~v~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~ 109 (318)
T 2vp8_A 41 RALIMAIVNRTPDSFYDKGATF-------SDAAARD----AVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIE 109 (318)
T ss_dssp SCEEEEEEC---------------------CHHHHH----HHHHHHHTTCSEEEEC----------CHHHHHHHHHHHHH
T ss_pred CcEEEEEEeCCCCcccCCCccC-------CHHHHHH----HHHHHHHCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHH
Confidence 4578887777777676665442 3344443 5667888999999554 2 3336666655 45
Q ss_pred HHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCCC---hhhhHHHHHHHHhhCCCcEEEEeCCC
Q 021144 202 LLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTS---PRFIHGLILSVRKVTSKPVIIYPNSG 278 (317)
Q Consensus 202 ~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~~---p~~~~~~l~~l~~~~~~pl~vyPNaG 278 (317)
.+++..+ .+.||+- -...+-+-+.++. +++ -||=.+ .+.|.+++ ++ .+.|++++++.|
T Consensus 110 ~l~~~~~--~vpISID---------T~~~~VaeaAl~a--Ga~--iINDVsg~~d~~m~~va---a~-~g~~vVlmh~~G 170 (318)
T 2vp8_A 110 WLRGAYP--DQLISVD---------TWRAQVAKAACAA--GAD--LINDTWGGVDPAMPEVA---AE-FGAGLVCAHTGG 170 (318)
T ss_dssp HHHHHST--TCEEEEE---------CSCHHHHHHHHHH--TCC--EEEETTSSSSTTHHHHH---HH-HTCEEEEECC--
T ss_pred HHHhhCC--CCeEEEe---------CCCHHHHHHHHHh--CCC--EEEECCCCCchHHHHHH---HH-hCCCEEEECCCC
Confidence 5554311 3556662 1222222222332 333 245432 23344443 33 378999999987
Q ss_pred C
Q 021144 279 E 279 (317)
Q Consensus 279 ~ 279 (317)
.
T Consensus 171 ~ 171 (318)
T 2vp8_A 171 A 171 (318)
T ss_dssp -
T ss_pred C
Confidence 6
No 314
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=43.63 E-value=2.5e+02 Score=27.75 Aligned_cols=65 Identities=26% Similarity=0.192 Sum_probs=38.3
Q ss_pred HHHHHHhCCCCEEEecc---------------CCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHh
Q 021144 173 RVLILANSGADLIAFET---------------IPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIA 237 (317)
Q Consensus 173 qi~~l~~~gvD~l~~ET---------------~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~ 237 (317)
+++.|+++|+|.+-+-- +|.+.-+..+.+++++.+ +|+|. |.|. ....++++.+
T Consensus 335 ~a~~Li~aGAD~vkVGiGpGSiCtTr~v~GvG~PQ~tAi~~~a~~a~~~~--vpvIA-----DGGI----~~sGDi~KAl 403 (556)
T 4af0_A 335 QAAQLIAAGADGLRIGMGSGSICITQEVMAVGRPQGTAVYAVAEFASRFG--IPCIA-----DGGI----GNIGHIAKAL 403 (556)
T ss_dssp HHHHHHHHTCSEEEECSSCSTTBCCTTTCCSCCCHHHHHHHHHHHHGGGT--CCEEE-----ESCC----CSHHHHHHHH
T ss_pred HHHHHHHcCCCEEeecCCCCcccccccccCCCCcHHHHHHHHHHHHHHcC--CCEEe-----cCCc----CcchHHHHHh
Confidence 56678889999996542 344443333444455554 88873 2222 2335777777
Q ss_pred hcCCCceEEEEcC
Q 021144 238 DSCEQVVAVGINC 250 (317)
Q Consensus 238 ~~~~~~~aiGvNC 250 (317)
. .++++|.+--
T Consensus 404 a--aGAd~VMlGs 414 (556)
T 4af0_A 404 A--LGASAVMMGG 414 (556)
T ss_dssp H--TTCSEEEEST
T ss_pred h--cCCCEEEEch
Confidence 5 3667777654
No 315
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=43.59 E-value=1.9e+02 Score=30.52 Aligned_cols=71 Identities=14% Similarity=0.090 Sum_probs=46.9
Q ss_pred HHHHHHHHHHhCCCCEEEeccC---------------CCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHH
Q 021144 169 FHRRRVLILANSGADLIAFETI---------------PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILEC 233 (317)
Q Consensus 169 ~h~~qi~~l~~~gvD~l~~ET~---------------p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a 233 (317)
.|.+.++.+.++|+|.|-+--- .+..-+..+++.+++.- ++|+++-++. +.+.+.+.
T Consensus 649 ~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~-~~Pv~vK~~~-------~~~~~~~~ 720 (1025)
T 1gte_A 649 DWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAV-QIPFFAKLTP-------NVTDIVSI 720 (1025)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHC-SSCEEEEECS-------CSSCHHHH
T ss_pred HHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhh-CCceEEEeCC-------ChHHHHHH
Confidence 4555667777799999987421 24455667788888763 6899987732 33456677
Q ss_pred HHHhhcCCCceEEEE
Q 021144 234 ASIADSCEQVVAVGI 248 (317)
Q Consensus 234 ~~~~~~~~~~~aiGv 248 (317)
++.+.+ .++++|-+
T Consensus 721 a~~~~~-~G~d~i~v 734 (1025)
T 1gte_A 721 ARAAKE-GGADGVTA 734 (1025)
T ss_dssp HHHHHH-HTCSEEEE
T ss_pred HHHHHH-cCCCEEEE
Confidence 766654 46777766
No 316
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=43.54 E-value=1.4e+02 Score=27.75 Aligned_cols=114 Identities=10% Similarity=0.059 Sum_probs=64.7
Q ss_pred CCHHH---HHHHHHHHHHHHHhCCCCEEEeccC----------C-----------CH-HH---HHHHHHHHHHh-CCCcc
Q 021144 161 VSLET---LKEFHRRRVLILANSGADLIAFETI----------P-----------NK-LE---AKAYAELLEEE-GITIP 211 (317)
Q Consensus 161 ~s~~e---l~~~h~~qi~~l~~~gvD~l~~ET~----------p-----------~~-~E---a~a~~~~~~~~-~~~~p 211 (317)
++.+| +.+.|.+.++...++|.|.|=+--- | ++ .. +..+++++++. +.+ |
T Consensus 156 mt~~eI~~~i~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~-~ 234 (377)
T 2r14_A 156 LETDEIPGIVEDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPE-R 234 (377)
T ss_dssp CCGGGHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGG-G
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCC-c
Confidence 55444 5567777777777899999854211 1 11 22 34456666654 434 8
Q ss_pred EEEEEEEcCC-CcccCCCcHHHHHH---HhhcCCCceEEEEcCCC----hh-hhHHHHHHHHhhCCCcEEEEeCCC
Q 021144 212 AWFSFNSKDG-INVVSGDSILECAS---IADSCEQVVAVGINCTS----PR-FIHGLILSVRKVTSKPVIIYPNSG 278 (317)
Q Consensus 212 v~iSf~~~~~-~~l~~G~~l~~a~~---~~~~~~~~~aiGvNC~~----p~-~~~~~l~~l~~~~~~pl~vyPNaG 278 (317)
|.+-++..+. ..+.+|.+++++++ .+.+ .+++.|-+-... +. .-...++.+++..+.|+++ |.|
T Consensus 235 v~vrls~~~~~~~~~~~~~~~~~~~la~~le~-~Gvd~i~v~~~~~~~~~~~~~~~~~~~ik~~~~iPvi~--~Gg 307 (377)
T 2r14_A 235 VGIRLTPFLELFGLTDDEPEAMAFYLAGELDR-RGLAYLHFNEPDWIGGDITYPEGFREQMRQRFKGGLIY--CGN 307 (377)
T ss_dssp EEEEECTTCCCTTCCCSCHHHHHHHHHHHHHH-TTCSEEEEECCC------CCCTTHHHHHHHHCCSEEEE--ESS
T ss_pred EEEEeccccccCCCCCCCCHHHHHHHHHHHHH-cCCCEEEEeCCcccCCCCcchHHHHHHHHHHCCCCEEE--ECC
Confidence 9888865421 11234666666544 3443 578877775421 11 0134567778878888765 454
No 317
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=43.51 E-value=1.3e+02 Score=25.84 Aligned_cols=83 Identities=17% Similarity=0.201 Sum_probs=52.0
Q ss_pred HHHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCC
Q 021144 172 RRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCT 251 (317)
Q Consensus 172 ~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~ 251 (317)
++++...++|+|++..-. .+ ..+++.+++.+ .|+++- + .++.++.+... .+++.|++
T Consensus 80 d~~~~A~~aGAd~v~~p~-~d----~~v~~~ar~~g--~~~i~G--v---------~t~~e~~~A~~--~Gad~vk~--- 136 (224)
T 1vhc_A 80 EQVVLAKSSGADFVVTPG-LN----PKIVKLCQDLN--FPITPG--V---------NNPMAIEIALE--MGISAVKF--- 136 (224)
T ss_dssp HHHHHHHHHTCSEEECSS-CC----HHHHHHHHHTT--CCEECE--E---------CSHHHHHHHHH--TTCCEEEE---
T ss_pred HHHHHHHHCCCCEEEECC-CC----HHHHHHHHHhC--CCEEec--c---------CCHHHHHHHHH--CCCCEEEE---
Confidence 467777888999997552 22 23445566654 777753 1 24677766554 47899999
Q ss_pred Ch-hhh--HHHHHHHHhhC-CCcEEEEeCCCC
Q 021144 252 SP-RFI--HGLILSVRKVT-SKPVIIYPNSGE 279 (317)
Q Consensus 252 ~p-~~~--~~~l~~l~~~~-~~pl~vyPNaG~ 279 (317)
-| ..+ ...|+.++... +.|+ .|=+|-
T Consensus 137 Fpa~~~gG~~~lk~l~~~~~~ipv--vaiGGI 166 (224)
T 1vhc_A 137 FPAEASGGVKMIKALLGPYAQLQI--MPTGGI 166 (224)
T ss_dssp TTTTTTTHHHHHHHHHTTTTTCEE--EEBSSC
T ss_pred eeCccccCHHHHHHHHhhCCCCeE--EEECCc
Confidence 33 222 56788888765 5665 565663
No 318
>1pv8_A Delta-aminolevulinic acid dehydratase; porphobilinogen synthase, tetrapyrrole biosynthesis, reactio intermediate, lyase; HET: PB1; 2.20A {Homo sapiens} SCOP: c.1.10.3 PDB: 1e51_A* 2z0i_A 2z1b_A
Probab=43.48 E-value=10 Score=35.04 Aligned_cols=25 Identities=32% Similarity=0.321 Sum_probs=22.2
Q ss_pred CCChHHHHHHHHHHHHhhccccccc
Q 021144 51 VSSPHLVRKVHLDYLDAGANIIITA 75 (317)
Q Consensus 51 l~~Pe~V~~iH~~Yl~AGAdiI~Tn 75 (317)
++....|.+.+..+-+||||+|.|.
T Consensus 294 iD~~~~v~Esl~~~kRAGAd~IiTY 318 (330)
T 1pv8_A 294 FDLKAAVLEAMTAFRRAGADIIITY 318 (330)
T ss_dssp SCHHHHHHHHHHHHHHHTCSEEEET
T ss_pred ccHHHHHHHHHHHHHhcCCCEEeee
Confidence 5777799999999999999999874
No 319
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=43.34 E-value=40 Score=24.82 Aligned_cols=57 Identities=25% Similarity=0.264 Sum_probs=34.9
Q ss_pred CChhhhHHHHHHHHhhCCCcEEEEeCCCCcccc-----cc-ccccc---cCCCChhhHHHHHHHHHH
Q 021144 251 TSPRFIHGLILSVRKVTSKPVIIYPNSGETYNA-----EL-KKWVV---SFSLHFFPLELILNPFAS 308 (317)
Q Consensus 251 ~~p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~-----~~-~~w~~---~~~~~~~~~~~~~~~w~~ 308 (317)
++...+..+++.++.. .+||+|+-|+...-|. +. +.... -...+|+++.+.+.+|++
T Consensus 35 tssqdirdiiksmkdn-gkplvvfvngasqndvnefqneakkegvsydvlkstdpeeltqrvreflk 100 (112)
T 2lnd_A 35 TSSQDIRDIIKSMKDN-GKPLVVFVNGASQNDVNEFQNEAKKEGVSYDVLKSTDPEELTQRVREFLK 100 (112)
T ss_dssp CSHHHHHHHHHHHTTC-CSCEEEEECSCCHHHHHHHHHHHHHHTCEEEEEECCCHHHHHHHHHHHHH
T ss_pred cchhhHHHHHHHHHhc-CCeEEEEecCcccccHHHHHHHHHhcCcchhhhccCCHHHHHHHHHHHHH
Confidence 3456677777777663 6788888887533221 11 11110 124679999999999885
No 320
>1a0c_A Xylose isomerase; ketolisomerase, xylose metabolism, glucose-fructose interconversion, hydride transfer; 2.50A {Thermoanaerobacteriumthermosulfurigenes} SCOP: c.1.15.3 PDB: 1a0d_A 1a0e_A
Probab=43.31 E-value=51 Score=31.57 Aligned_cols=80 Identities=10% Similarity=0.035 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHhCCCC-EEEeccCC----------CHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHH
Q 021144 166 LKEFHRRRVLILANSGAD-LIAFETIP----------NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECA 234 (317)
Q Consensus 166 l~~~h~~qi~~l~~~gvD-~l~~ET~p----------~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~ 234 (317)
+.+..++.++...+.||+ .|++|.+| +..++..++ ++.+.+-.+-+.+ +-......|.++.+.+
T Consensus 208 ~~e~L~~~~~~A~~~Gv~v~l~IEp~p~~~~~~~~~~t~~~al~li---~~vg~pn~vgv~l--Dt~H~~~~g~di~~~i 282 (438)
T 1a0c_A 208 FARFLHMAVDYAKEIGFEGQFLIEPKPKEPTKHQYDFDVANVLAFL---RKYDLDKYFKVNI--EANHATLAFHDFQHEL 282 (438)
T ss_dssp HHHHHHHHHHHHHHTTCCSEEEECCCSCSSSSEESSCSHHHHHHHH---HHTTCTTTEEEEE--EHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEeeCCCCCCCCcccCCHHHHHHHH---HHcCCCCeEEEEE--EhhhhhhcCCCHHHHH
Confidence 444444444444456776 78889874 455655554 4443111244444 3222335788888877
Q ss_pred HHhhcCCCceEEEEcC
Q 021144 235 SIADSCEQVVAVGINC 250 (317)
Q Consensus 235 ~~~~~~~~~~aiGvNC 250 (317)
+.+.....+..|=+|=
T Consensus 283 ~~~~~~~~L~hvHlnD 298 (438)
T 1a0c_A 283 RYARINGVLGSIDANT 298 (438)
T ss_dssp HHHHHTTCEEEEECCB
T ss_pred HHhcCCCcEEEEECCC
Confidence 6653222344555543
No 321
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=42.67 E-value=1.5e+02 Score=25.68 Aligned_cols=85 Identities=13% Similarity=0.058 Sum_probs=52.3
Q ss_pred HHHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCc------cEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceE
Q 021144 172 RRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITI------PAWFSFNSKDGINVVSGDSILECASIADSCEQVVA 245 (317)
Q Consensus 172 ~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~------pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~a 245 (317)
++++...++|+|+++- |.+.+ .+++.+++.+ + |++-- -.++.++.+.++ .+++.
T Consensus 76 ~~a~~ai~AGA~fivs---P~~~~--evi~~~~~~~--v~~~~~~~~~PG-----------~~TptE~~~A~~--~Gad~ 135 (217)
T 3lab_A 76 DDFQKAIDAGAQFIVS---PGLTP--ELIEKAKQVK--LDGQWQGVFLPG-----------VATASEVMIAAQ--AGITQ 135 (217)
T ss_dssp HHHHHHHHHTCSEEEE---SSCCH--HHHHHHHHHH--HHCSCCCEEEEE-----------ECSHHHHHHHHH--TTCCE
T ss_pred HHHHHHHHcCCCEEEe---CCCcH--HHHHHHHHcC--CCccCCCeEeCC-----------CCCHHHHHHHHH--cCCCE
Confidence 3566677899999986 44432 3455555543 5 66632 246788888776 47888
Q ss_pred EEEcCCChhhh--HHHHHHHHhhCCCcEEEEeCCCC
Q 021144 246 VGINCTSPRFI--HGLILSVRKVTSKPVIIYPNSGE 279 (317)
Q Consensus 246 iGvNC~~p~~~--~~~l~~l~~~~~~pl~vyPNaG~ 279 (317)
|.+-=. +.+ ...|+.++.... .+-+.|=+|-
T Consensus 136 vK~FPa--~~~gG~~~lkal~~p~p-~i~~~ptGGI 168 (217)
T 3lab_A 136 LKCFPA--SAIGGAKLLKAWSGPFP-DIQFCPTGGI 168 (217)
T ss_dssp EEETTT--TTTTHHHHHHHHHTTCT-TCEEEEBSSC
T ss_pred EEECcc--ccccCHHHHHHHHhhhc-CceEEEeCCC
Confidence 877322 222 477888876541 1445677774
No 322
>4e4r_A Phosphate acetyltransferase; structural genomics, EUTD, center for structural genomics of infectious diseases, csgid; HET: TRS; 1.44A {Staphylococcus aureus subsp}
Probab=42.65 E-value=10 Score=35.20 Aligned_cols=123 Identities=14% Similarity=0.070 Sum_probs=66.7
Q ss_pred CCCcchHHHHHhhc----cCCeEEEecchHHHHHHCCCCCCCccccccccCCChHHHHHHHHHHH--Hhhcccccccccc
Q 021144 5 SNGTTSFMTDFLQK----CGGYSVVDGGFATELERHGADLNDPLWSAKCLVSSPHLVRKVHLDYL--DAGANIIITASYQ 78 (317)
Q Consensus 5 ~~~~~~~l~~~l~~----~~~~lilDGgmgT~L~~~G~~~~~~lws~~~ll~~Pe~V~~iH~~Yl--~AGAdiI~TnTy~ 78 (317)
||-|++.|.+++++ ..++.+-.|-=-.-|+.--.-.. +-.....|+-+++.|++.-.++= ..+.+||-+.+.-
T Consensus 1 ~~~mm~~~~~l~~~ak~~~kriv~~eg~d~~vl~Aa~~a~~-eg~~~~iLvG~~~~I~~~~~~~g~~~~~~eIi~~~~~~ 79 (331)
T 4e4r_A 1 SNAMADLLNVLKDKLSGKNVKIVLPEGEDERVLTAATQLQA-TDYVTPIVLGDETKVQSLAQKLNLDISNIELINPATSE 79 (331)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEECCTTSHHHHHHHHHHHT-SSSEEEEEESCHHHHHHHHHHTTCCCTTSEEECGGGCT
T ss_pred CchHHHHHHHHHHHHhhCCCEEEEecCCCHHHHHHHHHHHH-cCCcEEEEECCHHHHHHHHHHcCCCcccCEEEcCCChh
Confidence 57787777777653 23466777765555554210000 01123346889999988766531 1256677666542
Q ss_pred cc------HHHH-HhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCCCeEEEEeeCCCcCcc
Q 021144 79 AT------IQGF-EAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSRPVLVAASVGSYGAYL 147 (317)
Q Consensus 79 as------~~~l-~~~g~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~~~~~~~~~~~~VagsiGP~g~~l 147 (317)
.. ...+ ++.| +.+++++..+...-+|-..+.. ..-+.+|.|.+|.||+.+
T Consensus 80 ~~~~~~~~~~~lr~~kg-~~~~A~~~~~~s~~~a~~lV~~------------------G~ADa~vsG~~~~T~~~l 136 (331)
T 4e4r_A 80 LKAELVQSFVERRKGKT-TEEQAQELLNNVNYFGTMLVYA------------------GKADGLVSGAAHSTGDTV 136 (331)
T ss_dssp THHHHHHHHHHHTTTSS-CHHHHHHHTTSHHHHHHHHHHT------------------TSCSEEEECSSTTCCCTH
T ss_pred HHHHHHHHHHHHHcCCC-CHHHHHHHhcccHHHHHHHHHC------------------CCCcEEEeCCCCCHHHHH
Confidence 11 1122 2235 5555554434444444444321 234789999999998764
No 323
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=42.56 E-value=1.9e+02 Score=26.02 Aligned_cols=135 Identities=22% Similarity=0.203 Sum_probs=76.9
Q ss_pred ChHHHHHHHHHHHHhhccccccc-cccccHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCC
Q 021144 53 SPHLVRKVHLDYLDAGANIIITA-SYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (317)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~Tn-Ty~as~~~l~~~g~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (317)
+.+.+++.-+.++++|.|-|..+ |-+=. . -++.+|-.++++.+++.+. +
T Consensus 31 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~-~-----~Ls~eEr~~v~~~~v~~~~------------------------g 80 (316)
T 3e96_A 31 DWHHYKETVDRIVDNGIDVIVPCGNTSEF-Y-----ALSLEEAKEEVRRTVEYVH------------------------G 80 (316)
T ss_dssp CHHHHHHHHHHHHTTTCCEECTTSGGGTG-G-----GSCHHHHHHHHHHHHHHHT------------------------T
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccCc-c-----cCCHHHHHHHHHHHHHHhC------------------------C
Confidence 45778888888899999955433 33211 1 2455666777776665542 2
Q ss_pred CCeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEecc----CCCHHHHHHHHHHHHHhC
Q 021144 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFET----IPNKLEAKAYAELLEEEG 207 (317)
Q Consensus 132 ~~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~ET----~p~~~Ea~a~~~~~~~~~ 207 (317)
+-+.|+|. |. +.++..+ +++...+.|+|.+++=+ -|+.+++..-.+.+.+..
T Consensus 81 rvpViaGv-g~-------------------~t~~ai~----la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~ 136 (316)
T 3e96_A 81 RALVVAGI-GY-------------------ATSTAIE----LGNAAKAAGADAVMIHMPIHPYVTAGGVYAYFRDIIEAL 136 (316)
T ss_dssp SSEEEEEE-CS-------------------SHHHHHH----HHHHHHHHTCSEEEECCCCCSCCCHHHHHHHHHHHHHHH
T ss_pred CCcEEEEe-Cc-------------------CHHHHHH----HHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhC
Confidence 34567773 52 1233332 45566678999998743 246777777666655442
Q ss_pred CCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCCC
Q 021144 208 ITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTS 252 (317)
Q Consensus 208 ~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~~ 252 (317)
++|+++== + +. .-+.+...+.+ +.++ .+||--++
T Consensus 137 -~lPiilYn-~---g~---~l~~~~~~~La-~~pn--IvgiKdss 170 (316)
T 3e96_A 137 -DFPSLVYF-K---DP---EISDRVLVDLA-PLQN--LVGVKYAI 170 (316)
T ss_dssp -TSCEEEEE-C---CT---TSCTHHHHHHT-TCTT--EEEEEECC
T ss_pred -CCCEEEEe-C---CC---CCCHHHHHHHH-cCCC--EEEEEeCC
Confidence 49988632 1 21 22334344433 3344 56666654
No 324
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=42.56 E-value=97 Score=28.00 Aligned_cols=93 Identities=12% Similarity=-0.022 Sum_probs=56.6
Q ss_pred HHHHHHhCCCCEEEecc--CCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcC
Q 021144 173 RVLILANSGADLIAFET--IPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINC 250 (317)
Q Consensus 173 qi~~l~~~gvD~l~~ET--~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC 250 (317)
+++.+.+. ||++-+-. +.+.. +++.+... ++||.++= |.-.+=..+..+++.+....+...+.+-|
T Consensus 103 ~v~~l~~~-vd~lqIgA~~~~n~~----LLr~va~~--gkPVilK~-----G~~~t~~ei~~ave~i~~~Gn~~i~L~er 170 (285)
T 3sz8_A 103 QAAPVAEI-ADVLQVPAFLARQTD----LVVAIAKA--GKPVNVKK-----PQFMSPTQLKHVVSKCGEVGNDRVMLCER 170 (285)
T ss_dssp GHHHHHTT-CSEEEECGGGTTCHH----HHHHHHHT--SSCEEEEC-----CTTSCGGGTHHHHHHHHHTTCCCEEEEEC
T ss_pred HHHHHHHh-CCEEEECccccCCHH----HHHHHHcc--CCcEEEeC-----CCCCCHHHHHHHHHHHHHcCCCcEEEEeC
Confidence 35556666 99998765 34444 33344444 49999764 22112234567788776544556788888
Q ss_pred CC---hhh---hHHHHHHHHhhC-CCcEEEEeCC
Q 021144 251 TS---PRF---IHGLILSVRKVT-SKPVIIYPNS 277 (317)
Q Consensus 251 ~~---p~~---~~~~l~~l~~~~-~~pl~vyPNa 277 (317)
+. +.. =...+..+++.+ +.|+++.|.=
T Consensus 171 g~~y~~~~~~vdl~~i~~lk~~~~~~pV~~D~sH 204 (285)
T 3sz8_A 171 GSSFGYDNLVVDMLGFRQMAETTGGCPVIFDVTH 204 (285)
T ss_dssp CEECSSSCEECCTTHHHHHHHHTTSCCEEEETTT
T ss_pred CCCCCCCcCccCHHHHHHHHHhCCCCCEEEeCCC
Confidence 63 222 145667788777 5899887653
No 325
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=42.50 E-value=1.8e+02 Score=25.75 Aligned_cols=93 Identities=14% Similarity=0.129 Sum_probs=46.5
Q ss_pred HHHHHHhCCCCEEEeccCCC----HHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEE-E
Q 021144 173 RVLILANSGADLIAFETIPN----KLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAV-G 247 (317)
Q Consensus 173 qi~~l~~~gvD~l~~ET~p~----~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~ai-G 247 (317)
+++.+++.|+|+|=+-.-++ .+.+..+++.+++.. ++|+ |+-.. +-+-++.+++.+ .+...| -
T Consensus 39 ~a~~~v~~GAdiIDIg~~s~~~eE~~rv~~vi~~l~~~~-~~pi--sIDT~------~~~v~~aal~a~---~Ga~iINd 106 (271)
T 2yci_X 39 WARRQAEKGAHYLDVNTGPTADDPVRVMEWLVKTIQEVV-DLPC--CLDST------NPDAIEAGLKVH---RGHAMINS 106 (271)
T ss_dssp HHHHHHHTTCSEEEEECCSCSSCHHHHHHHHHHHHHHHC-CCCE--EEECS------CHHHHHHHHHHC---CSCCEEEE
T ss_pred HHHHHHHCCCCEEEEcCCcCchhHHHHHHHHHHHHHHhC-CCeE--EEeCC------CHHHHHHHHHhC---CCCCEEEE
Confidence 45556679999996655443 445556666676642 4564 44110 112223333322 233332 2
Q ss_pred EcCCChhhhHHHHHHHHhhCCCcEEEEeC--CCC
Q 021144 248 INCTSPRFIHGLILSVRKVTSKPVIIYPN--SGE 279 (317)
Q Consensus 248 vNC~~p~~~~~~l~~l~~~~~~pl~vyPN--aG~ 279 (317)
+|-.. +.+...++..++ .+.|+++.++ .|.
T Consensus 107 vs~~~-d~~~~~~~~~a~-~~~~vv~m~~d~~G~ 138 (271)
T 2yci_X 107 TSADQ-WKMDIFFPMAKK-YEAAIIGLTMNEKGV 138 (271)
T ss_dssp ECSCH-HHHHHHHHHHHH-HTCEEEEESCBTTBC
T ss_pred CCCCc-cccHHHHHHHHH-cCCCEEEEecCCCCC
Confidence 44432 222334443333 3678888887 554
No 326
>1w1z_A Delta-aminolevulinic acid dehydratase; synthase, tetrapyrrole biosynthesis, ALAD, porphyrin biosynt heme biosynthesis, lyase; 2.6A {Prosthecochloris vibrioformis} SCOP: c.1.10.3 PDB: 2c1h_A*
Probab=42.29 E-value=11 Score=34.70 Aligned_cols=25 Identities=28% Similarity=0.332 Sum_probs=22.3
Q ss_pred CCChHHHHHHHHHHHHhhccccccc
Q 021144 51 VSSPHLVRKVHLDYLDAGANIIITA 75 (317)
Q Consensus 51 l~~Pe~V~~iH~~Yl~AGAdiI~Tn 75 (317)
++....|.+.+..+-+||||+|.|.
T Consensus 294 iD~~~~v~Esl~~~kRAGAd~IiTY 318 (328)
T 1w1z_A 294 IDEDRVMMESLLCMKRAGADIIFTY 318 (328)
T ss_dssp SCHHHHHHHHHHHHHHHTCSEEEET
T ss_pred ccHHHHHHHHHHHHHhcCCCEEeee
Confidence 6777799999999999999999874
No 327
>3ufx_B Succinyl-COA synthetase beta subunit; ATP-grAsp fold, ligase; HET: GDP; 2.35A {Thermus aquaticus}
Probab=42.08 E-value=87 Score=29.49 Aligned_cols=85 Identities=13% Similarity=0.150 Sum_probs=50.4
Q ss_pred CCHHHHHHHHHHHHHHH-HhCCCCEEEecc---CCC-HHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHH
Q 021144 161 VSLETLKEFHRRRVLIL-ANSGADLIAFET---IPN-KLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECAS 235 (317)
Q Consensus 161 ~s~~el~~~h~~qi~~l-~~~gvD~l~~ET---~p~-~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~ 235 (317)
.+.+++++ -++.+ .+.+||.+++-. +.+ -.=++++++++++.+.++|+++.| .|+...+..+
T Consensus 284 a~~e~~~~----al~~~l~d~~v~~ilv~i~ggi~~~~~vA~~i~~a~~~~~~~kPvvv~~---------~G~~~~~~~~ 350 (397)
T 3ufx_B 284 AKADVVYN----ALKVVLKDPDVKGVFINIFGGITRADEVAKGVIRALEEGLLTKPVVMRV---------AGTAEEEAKK 350 (397)
T ss_dssp CCHHHHHH----HHHHHHTCTTCCEEEEEEEEEEEESHHHHHHHHHHHTTTCCCSCEEEEE---------EEECHHHHHH
T ss_pred CCHHHHHH----HHHHHHcCCCCCEEEEECCCCCCCHHHHHHHHHHHHHhhCCCCcEEEEc---------cCCCHHHHHH
Confidence 46565444 44444 457899887632 222 333577888888764569999888 3556777777
Q ss_pred HhhcCCCceEEEEcCCChhhhHHHHHHH
Q 021144 236 IADSCEQVVAVGINCTSPRFIHGLILSV 263 (317)
Q Consensus 236 ~~~~~~~~~aiGvNC~~p~~~~~~l~~l 263 (317)
.+.+ .+ | ..+..|+.....+-.+
T Consensus 351 ~l~~-~g---i-p~~~~~e~Aa~~~~~l 373 (397)
T 3ufx_B 351 LLEG-KP---V-YMYPTSIEAAKVTVAM 373 (397)
T ss_dssp HTTT-SS---E-EECSSHHHHHHHHHHS
T ss_pred HHHh-CC---C-cccCCHHHHHHHHHHH
Confidence 7764 23 1 2244665544444333
No 328
>3emz_A Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 barrel, GH10 enzyme complex, hydrolase; HET: HXH; 2.08A {Bacillus SP} SCOP: c.1.8.3 PDB: 3emq_A* 3emc_A*
Probab=41.93 E-value=47 Score=30.59 Aligned_cols=47 Identities=17% Similarity=0.051 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHhCC--CCEEEecc-----CCCHHHHHHHHHHHHHhCCCccEEEEE
Q 021144 168 EFHRRRVLILANSG--ADLIAFET-----IPNKLEAKAYAELLEEEGITIPAWFSF 216 (317)
Q Consensus 168 ~~h~~qi~~l~~~g--vD~l~~ET-----~p~~~Ea~a~~~~~~~~~~~~pv~iSf 216 (317)
+.+..+++.|.+.| +|.|-+.. .|+..+++..++.+...+ +||+||=
T Consensus 187 ~~~~~~v~~l~~~GvpidgiG~Q~H~~~~~p~~~~~~~~l~~~a~lG--l~v~iTE 240 (331)
T 3emz_A 187 EKIYNLVRSLLDQGAPVHGIGMQGHWNIHGPSMDEIRQAIERYASLD--VQLHVTE 240 (331)
T ss_dssp HHHHHHHHHHHHHTCCCCEEEECCEEETTBSCHHHHHHHHHHHHTTS--CEEEEEE
T ss_pred HHHHHHHHHHHHCCCccceEEECceecCCCCCHHHHHHHHHHHHHcC--CcEEEee
Confidence 34556788887777 59998774 478899999999988876 9999874
No 329
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=41.84 E-value=1.2e+02 Score=28.30 Aligned_cols=113 Identities=6% Similarity=-0.007 Sum_probs=64.1
Q ss_pred CCCCHHHHH----HHHHHHHHHHH-hCCCCEEEecc----------------C-C------CH-HH---HHHHHHHHHHh
Q 021144 159 DAVSLETLK----EFHRRRVLILA-NSGADLIAFET----------------I-P------NK-LE---AKAYAELLEEE 206 (317)
Q Consensus 159 ~~~s~~el~----~~h~~qi~~l~-~~gvD~l~~ET----------------~-p------~~-~E---a~a~~~~~~~~ 206 (317)
.+++.+|+. +.|.+.++... ++|.|.|=+=- - . ++ .. +..+++++++.
T Consensus 161 r~lt~~eI~~~~i~~f~~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr~a 240 (379)
T 3aty_A 161 EELTDDEVRDGIIPLFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDA 240 (379)
T ss_dssp EECCHHHHHHTHHHHHHHHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHHHh
Confidence 347777766 46666677778 89999984421 0 1 22 12 34455666654
Q ss_pred CCCccEEEEEEEcCCC-cccCCCcHHHHHHH---hhcCCCceEEEEcCCC---hhhhHHHHHHHHhhCCCcEEE
Q 021144 207 GITIPAWFSFNSKDGI-NVVSGDSILECASI---ADSCEQVVAVGINCTS---PRFIHGLILSVRKVTSKPVII 273 (317)
Q Consensus 207 ~~~~pv~iSf~~~~~~-~l~~G~~l~~a~~~---~~~~~~~~aiGvNC~~---p~~~~~~l~~l~~~~~~pl~v 273 (317)
-...|+.+-++..+.. ...+|.++++++.. +.+ .+++.|-+-+.. +..-.. ++.+++..+.|+++
T Consensus 241 vg~~~v~vRis~~~~~~~~~~~~~~~~~~~la~~l~~-~Gvd~i~v~~~~~~~~~~~~~-~~~ir~~~~iPvi~ 312 (379)
T 3aty_A 241 VGSDRVGLRISPLNGVHGMIDSNPEALTKHLCKKIEP-LSLAYLHYLRGDMVNQQIGDV-VAWVRGSYSGVKIS 312 (379)
T ss_dssp HCGGGEEEEECTTCCGGGCCCSCHHHHHHHHHHHHGG-GCCSEEEEECSCTTSCCCCCH-HHHHHTTCCSCEEE
T ss_pred cCCCeEEEEECcccccccCCCCCCHHHHHHHHHHHHH-hCCCEEEEcCCCcCCCCccHH-HHHHHHHCCCcEEE
Confidence 2223777666553321 12356666665544 443 478887776632 111125 77888888889765
No 330
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A
Probab=41.72 E-value=11 Score=34.95 Aligned_cols=25 Identities=36% Similarity=0.493 Sum_probs=22.2
Q ss_pred CCChHHHHHHHHHHHHhhccccccc
Q 021144 51 VSSPHLVRKVHLDYLDAGANIIITA 75 (317)
Q Consensus 51 l~~Pe~V~~iH~~Yl~AGAdiI~Tn 75 (317)
++....|.+.+..+-+||||+|.|.
T Consensus 305 iD~~~~v~Esl~~~kRAGAd~IiTY 329 (342)
T 1h7n_A 305 VDLKTIAFESHQGFLRAGARLIITY 329 (342)
T ss_dssp SCHHHHHHHHHHHHHHTTCSEEEET
T ss_pred ccHHHHHHHHHHHHHhcCCCEEEee
Confidence 5667799999999999999999874
No 331
>1i1w_A Endo-1,4-beta-xylanase; xylan degradation, hydrolase, glycosidase, enzyme, ultra HIG resolution, cryo temperature, 1; HET: PCA; 0.89A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1i1x_A* 2bnj_A* 1gok_A 1gom_A 1goo_A 1goq_A* 1gor_A* 1k6a_A 3o2l_A 3nyd_A* 1tux_A 1b31_A 1b30_A 1b3v_A* 1b3w_A* 1b3x_A* 1b3y_A* 1b3z_A* 1bg4_A
Probab=41.71 E-value=62 Score=29.12 Aligned_cols=76 Identities=17% Similarity=0.141 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHhCC--CCEEEecc---CCCHHHHHHHHHHHHHhCCCc-cEEEE-EEEcCCCcccCCCcHHHHHHHhhcC
Q 021144 168 EFHRRRVLILANSG--ADLIAFET---IPNKLEAKAYAELLEEEGITI-PAWFS-FNSKDGINVVSGDSILECASIADSC 240 (317)
Q Consensus 168 ~~h~~qi~~l~~~g--vD~l~~ET---~p~~~Ea~a~~~~~~~~~~~~-pv~iS-f~~~~~~~l~~G~~l~~a~~~~~~~ 240 (317)
+.+...++.|.+.| +|.|-+.. .+...+++..++.+.+.+ + ||||| +.+... ....+++++..+...
T Consensus 185 ~~~~~~v~~l~~~G~~iDgiG~Q~H~~~~~~~~~~~~l~~~a~~G--~~pi~iTEldi~~~----qa~~y~~~~~~~~~~ 258 (303)
T 1i1w_A 185 QAIVNRVKKWRAAGVPIDGIGSQTHLSAGQGASVLQALPLLASAG--TPEVAITELDVAGA----SSTDYVNVVNACLNV 258 (303)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEECTTTHHHHHHHHHHHHTTC--CSEEEEEEEEETTC----CHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHCCCcccEEEeccccCCCCHHHHHHHHHHHHHCC--CCeEEEEeCCccch----HHHHHHHHHHHHHhC
Confidence 44556778787778 49998876 455677778887777665 8 99998 555421 122345555555443
Q ss_pred CCceEEEEcCC
Q 021144 241 EQVVAVGINCT 251 (317)
Q Consensus 241 ~~~~aiGvNC~ 251 (317)
+. .+||.--
T Consensus 259 ~~--v~git~W 267 (303)
T 1i1w_A 259 SS--CVGITVW 267 (303)
T ss_dssp TT--EEEEEES
T ss_pred CC--ceEEEEE
Confidence 33 4455443
No 332
>3txv_A Probable tagatose 6-phosphate kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.80A {Sinorhizobium meliloti}
Probab=41.67 E-value=66 Score=31.08 Aligned_cols=72 Identities=13% Similarity=0.198 Sum_probs=41.4
Q ss_pred HHHHHHHhhcCCCceEEEEcCCChhhhHHHHHHHHhhCCCcEEEEeCCCCc-cccccccccccCCCChhhHHHHHHHHHH
Q 021144 230 ILECASIADSCEQVVAVGINCTSPRFIHGLILSVRKVTSKPVIIYPNSGET-YNAELKKWVVSFSLHFFPLELILNPFAS 308 (317)
Q Consensus 230 l~~a~~~~~~~~~~~aiGvNC~~p~~~~~~l~~l~~~~~~pl~vyPNaG~~-~d~~~~~w~~~~~~~~~~~~~~~~~w~~ 308 (317)
+.+.++...+..+.....|||.+++.+..+|+...+ .+.|+++....+.. |.+ .+ .+++|+.|..++....+
T Consensus 8 mkelL~~ak~g~~~gi~av~~~n~e~i~Ail~aAee-~~sPVIIe~t~~qv~~~g---GY---tG~~p~~f~~~V~~~A~ 80 (450)
T 3txv_A 8 LIDIARWSERPGPRGIPSICSAHPLVIEAAMLRAHR-EKAPVLIEATCNQVNQDG---GY---TGMTPEDFTRFVGAIAD 80 (450)
T ss_dssp -------------CCEEEECCCCHHHHHHHHHHHHH-SCSCEEEEEETTTSCTTC---TT---TTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCcEEEEeCcCCHHHHHHHHHHHHH-hCCCEEEEcChhhHhhcC---CC---CCCCHHHHHHHHHHHHH
Confidence 445555544423456778888899998888887766 46898877666543 211 11 13678889998887754
No 333
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=41.64 E-value=2e+02 Score=25.94 Aligned_cols=90 Identities=9% Similarity=0.030 Sum_probs=52.5
Q ss_pred HHHHHhCCCCEEEecc--CCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCC------ceE
Q 021144 174 VLILANSGADLIAFET--IPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQ------VVA 245 (317)
Q Consensus 174 i~~l~~~gvD~l~~ET--~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~------~~a 245 (317)
++.+.+. ||++-+-. +.+.. .++.+... ++||.++= |...+=..+..+++.+....+ ...
T Consensus 101 v~~l~~~-vd~lkIgA~~~~n~~----LLr~~a~~--gkPVilK~-----G~~~t~~e~~~ave~i~~~Gn~~~~~~~~i 168 (288)
T 3tml_A 101 IEQVASV-VDVLQTPAFLCRQTD----FIHACARS--GKPVNIKK-----GQFLAPHDMKNVIDKARDAAREAGLSEDRF 168 (288)
T ss_dssp HHHHHHH-CSEEEECGGGTTCHH----HHHHHHTS--SSCEEEEC-----CTTCCTTHHHHHHHHHHHHHHTTTCCSCCE
T ss_pred HHHHHHh-CCEEEECcccccCHH----HHHHHHcc--CCcEEEeC-----CCCCCHHHHHHHHHHHHHcCCCccCCCCcE
Confidence 4445555 89987765 33443 23334444 49999764 221233345677777754222 357
Q ss_pred EEEcCCC---hhh---hHHHHHHHHhhCCCcEEEEeC
Q 021144 246 VGINCTS---PRF---IHGLILSVRKVTSKPVIIYPN 276 (317)
Q Consensus 246 iGvNC~~---p~~---~~~~l~~l~~~~~~pl~vyPN 276 (317)
+.+-|+. ++. =...+..+++ +..|+++.|.
T Consensus 169 ~L~erg~~y~~~~~~vdl~~i~~lk~-~~~pV~~D~s 204 (288)
T 3tml_A 169 MACERGVSFGYNNLVSDMRSLAIMRE-TNAPVVFDAT 204 (288)
T ss_dssp EEEECCEECSSSCEECCHHHHHHGGG-GSSCEEEEHH
T ss_pred EEEeCCCCCCCCcCcCCHHHHHHHHh-cCCcEEEcCC
Confidence 7788863 333 2556777887 7899988653
No 334
>1l6s_A Porphobilinogen synthase; dehydratase, lyase; HET: CME DSB; 1.70A {Escherichia coli} SCOP: c.1.10.3 PDB: 1i8j_A* 1l6y_A* 1b4e_A
Probab=41.50 E-value=12 Score=34.60 Aligned_cols=25 Identities=20% Similarity=0.254 Sum_probs=22.2
Q ss_pred CCChHHHHHHHHHHHHhhccccccc
Q 021144 51 VSSPHLVRKVHLDYLDAGANIIITA 75 (317)
Q Consensus 51 l~~Pe~V~~iH~~Yl~AGAdiI~Tn 75 (317)
++....|.+.+..+-+||||+|.|.
T Consensus 287 iD~~~~vlEsl~~~kRAGAd~IiTY 311 (323)
T 1l6s_A 287 IDEEKVVLESLGSIKRAGADLIFSY 311 (323)
T ss_dssp SCHHHHHHHHHHHHHHTTCSEEEET
T ss_pred ccHHHHHHHHHHHHHhcCCCEEeeh
Confidence 5667789999999999999999874
No 335
>2gzm_A Glutamate racemase; enzyme, isomerase; HET: DGL; 1.99A {Bacillus anthracis}
Probab=41.36 E-value=1.1e+02 Score=26.80 Aligned_cols=35 Identities=20% Similarity=0.305 Sum_probs=28.0
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEe--ccCC
Q 021144 156 DYGDAVSLETLKEFHRRRVLILANSGADLIAF--ETIP 191 (317)
Q Consensus 156 ~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~--ET~p 191 (317)
+|+. .+.+++.++-.+.++.|.+.|+|+|++ -|.+
T Consensus 41 Pyg~-~s~~~i~~~~~~~~~~L~~~g~d~iviaCNTas 77 (267)
T 2gzm_A 41 PYGP-RSREEVRQFTWEMTEHLLDLNIKMLVIACNTAT 77 (267)
T ss_dssp CCTT-SCHHHHHHHHHHHHHHHHTTTCSEEEECCHHHH
T ss_pred CCCC-CCHHHHHHHHHHHHHHHHHCCCCEEEEeCchhh
Confidence 3443 578999999999999999999999987 4554
No 336
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=41.11 E-value=45 Score=28.33 Aligned_cols=41 Identities=17% Similarity=0.235 Sum_probs=26.9
Q ss_pred HHHHHHhCCCCEEEeccC--CCHHHHHHHHHHHHHhCCCccEEEEE
Q 021144 173 RVLILANSGADLIAFETI--PNKLEAKAYAELLEEEGITIPAWFSF 216 (317)
Q Consensus 173 qi~~l~~~gvD~l~~ET~--p~~~Ea~a~~~~~~~~~~~~pv~iSf 216 (317)
.++.+.++|+|++.+=-. +. .+...+++.+++.+ +++++++
T Consensus 83 ~v~~~~~~Gad~v~vh~~~~~~-~~~~~~~~~~~~~g--~~ig~~~ 125 (230)
T 1rpx_A 83 RVPDFIKAGADIVSVHCEQSST-IHLHRTINQIKSLG--AKAGVVL 125 (230)
T ss_dssp HHHHHHHTTCSEEEEECSTTTC-SCHHHHHHHHHHTT--SEEEEEE
T ss_pred HHHHHHHcCCCEEEEEecCccc-hhHHHHHHHHHHcC--CcEEEEe
Confidence 466677799999965443 32 33455666677654 7788776
No 337
>2jfz_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: 003 DGL; 1.86A {Helicobacter pylori} PDB: 2jfx_A* 2jfy_A* 2w4i_A*
Probab=40.85 E-value=44 Score=29.20 Aligned_cols=41 Identities=20% Similarity=0.256 Sum_probs=30.4
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEec--cCC--CHHHHH
Q 021144 156 DYGDAVSLETLKEFHRRRVLILANSGADLIAFE--TIP--NKLEAK 197 (317)
Q Consensus 156 ~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~E--T~p--~~~Ea~ 197 (317)
+|++ -+.+++.++..+.++.|.+.|+|+|++= |.+ -+++++
T Consensus 38 Pyg~-~s~~~i~~~~~~~~~~L~~~g~d~iviaCNTa~~~~~~~lr 82 (255)
T 2jfz_A 38 PYGT-KDPTTIKQFGLEALDFFKPHEIELLIVACNTASALALEEMQ 82 (255)
T ss_dssp CCTT-SCHHHHHHHHHHHHHHHGGGCCSCEEECCHHHHHHTHHHHH
T ss_pred CCCC-CCHHHHHHHHHHHHHHHHHCCCCEEEEeCchhhHHHHHHHH
Confidence 3443 5789999999999999999999999765 444 344544
No 338
>3cyv_A URO-D, UPD, uroporphyrinogen decarboxylase; alpha/beta barrel, cytoplasm, lyase, porphyrin biosynthesis; 2.80A {Shigella flexneri}
Probab=40.76 E-value=2.1e+02 Score=25.89 Aligned_cols=83 Identities=12% Similarity=0.122 Sum_probs=43.5
Q ss_pred HHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCC--cHHHHHHHhhcCCC---ceEEEE
Q 021144 174 VLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGD--SILECASIADSCEQ---VVAVGI 248 (317)
Q Consensus 174 i~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~--~l~~a~~~~~~~~~---~~aiGv 248 (317)
++.+.+.|+|+|-++...++.|++..+ +.++.++ -.++. .+..|+ .+.+.++.+-+..+ -..++.
T Consensus 256 l~~l~~~g~d~i~~d~~~dl~~~~~~~------g~~~~l~--Gn~dp--~~l~~t~e~i~~~v~~~l~~~g~~~g~I~~~ 325 (354)
T 3cyv_A 256 LEAMAETGCDALGLDWTTDIADARRRV------GNKVALQ--GNMDP--SMLYAPPARIEEEVATILAGFGHGEGHVFNL 325 (354)
T ss_dssp HHHHHTTSCSEEECCTTSCHHHHHHHH------TTTSEEE--CCBCG--GGGGSCHHHHHHHHHHHHTTTTTSSCEEBCB
T ss_pred HHHHHhcCCCEEEeCCCCCHHHHHHHh------CCCeEEE--ecCCh--HHhCCCHHHHHHHHHHHHHHhCCCCCeEEec
Confidence 445778999999999777888765432 2123333 23332 233443 23333333322212 244555
Q ss_pred cCC-----ChhhhHHHHHHHHhh
Q 021144 249 NCT-----SPRFIHGLILSVRKV 266 (317)
Q Consensus 249 NC~-----~p~~~~~~l~~l~~~ 266 (317)
.|. .|+.+..+++..++.
T Consensus 326 g~gi~~~~p~env~a~v~~v~~~ 348 (354)
T 3cyv_A 326 GHGIHQDVPPEHAGVFVEAVHRL 348 (354)
T ss_dssp SSCCCTTSCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHH
Confidence 574 246666666665543
No 339
>2inf_A URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis}
Probab=40.73 E-value=1.2e+02 Score=27.78 Aligned_cols=24 Identities=13% Similarity=-0.035 Sum_probs=18.0
Q ss_pred HHHHHhCCCCEEEeccCCCHHHHH
Q 021144 174 VLILANSGADLIAFETIPNKLEAK 197 (317)
Q Consensus 174 i~~l~~~gvD~l~~ET~p~~~Ea~ 197 (317)
+..+.+.|+|.|-++.-.++.+++
T Consensus 258 l~~l~~~g~d~~~~d~~~d~~~~~ 281 (359)
T 2inf_A 258 AGDWHDLPLDVVGLDWRLGIDEAR 281 (359)
T ss_dssp HHHHHTSSCSEEECCTTSCHHHHH
T ss_pred HHHHHHhCCCEEEeCCCCCHHHHH
Confidence 445668999999999766776654
No 340
>3n2b_A Diaminopimelate decarboxylase; LYSA, lyase, structural genom center for structural genomics of infectious diseases, CSGI; 1.80A {Vibrio cholerae}
Probab=40.57 E-value=2.1e+02 Score=27.05 Aligned_cols=71 Identities=17% Similarity=0.183 Sum_probs=43.0
Q ss_pred HHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCC---------C--cccCCCcHHHHH---HHhhcCCC
Q 021144 177 LANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDG---------I--NVVSGDSILECA---SIADSCEQ 242 (317)
Q Consensus 177 l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~---------~--~l~~G~~l~~a~---~~~~~~~~ 242 (317)
+++.|+..+.+ -+..|++.+.+.+++.+...+|++-+....+ + .-+-|.+++++. +.+....+
T Consensus 139 a~~~gv~~~~v---ds~~el~~l~~~a~~~~~~~~V~lRvn~~~~~~~~~~i~tG~~~sKfG~~~~~~~~~~~~~~~~~~ 215 (441)
T 3n2b_A 139 ALQLKIKCFNV---ESEPELQRLNKVAGELGVKAPISLRINPDVDAKTHPYISTGLRDNKFGITFDRAAQVYRLAHSLPN 215 (441)
T ss_dssp HHHTTCSEEEE---CSHHHHHHHHHHHHHHTCCEEEEEEBCCCCCTTTCHHHHHHHHTSSSSBCGGGHHHHHHHHHHCTT
T ss_pred HHHCCCCEEEE---cCHHHHHHHHHHHHhcCCCcEEEEEeccCCCcCCCcccccCCCCCcccCCHHHHHHHHHHHhcCCC
Confidence 34467775544 4788999888888776644566666543211 0 134566655544 44444457
Q ss_pred ceEEEEcC
Q 021144 243 VVAVGINC 250 (317)
Q Consensus 243 ~~aiGvNC 250 (317)
+...|+-|
T Consensus 216 l~l~Glh~ 223 (441)
T 3n2b_A 216 LDVHGIDC 223 (441)
T ss_dssp EEEEEEEC
T ss_pred eEEEEEEE
Confidence 77888877
No 341
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=40.54 E-value=8.5 Score=35.23 Aligned_cols=90 Identities=18% Similarity=0.172 Sum_probs=50.2
Q ss_pred HHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCC--
Q 021144 174 VLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCT-- 251 (317)
Q Consensus 174 i~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~-- 251 (317)
++.+.++|+|.| -++- .......++.+++...+.++++.. .++.++.+.+.. +++.||+|=.
T Consensus 93 ~qil~aaGAD~I-d~s~--~~~~~~li~~i~~~~~g~~vvv~v-----------~~~~Ea~~a~~~--Gad~I~v~g~~g 156 (297)
T 4adt_A 93 AQILEELKVDML-DESE--VLTMADEYNHINKHKFKTPFVCGC-----------TNLGEALRRISE--GASMIRTKGEAG 156 (297)
T ss_dssp HHHHHHTTCSEE-EEET--TSCCSCSSCCCCGGGCSSCEEEEE-----------SSHHHHHHHHHH--TCSEEEECCCTT
T ss_pred HHHHHHcCCCEE-EcCC--CCCHHHHHHHHHhcCCCCeEEEEe-----------CCHHHHHHHHhC--CCCEEEECCCcC
Confidence 445567999999 2221 111111222333322247787643 245666666653 6789999832
Q ss_pred -Ch---------------------------------hhhHHHHHHHHhhCCCcEEEEeCCCC
Q 021144 252 -SP---------------------------------RFIHGLILSVRKVTSKPVIIYPNSGE 279 (317)
Q Consensus 252 -~p---------------------------------~~~~~~l~~l~~~~~~pl~vyPNaG~ 279 (317)
+. ..-..+++++++..+.|+++...+|-
T Consensus 157 TG~~~~~v~h~~~~~~eir~l~~~~~d~L~t~~~~~~~~~~ll~~i~~~~~iPVivvA~GGI 218 (297)
T 4adt_A 157 TGNIIEAIKHIRTVNNEIKYLCSLDESEVYNFAKKLRAPIDLILLTRKLKRLPVVNFAAGGI 218 (297)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHSCTTTHHHHHHHHTCCHHHHHHHHHHTSCSSEEEEESCC
T ss_pred CCchHHHHHHHHHhhhhhhhhccccccccccccccCCCCHHHHHHHHHhcCCCeEEEecCCC
Confidence 10 00124566666667789888888885
No 342
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=40.44 E-value=2.4e+02 Score=26.47 Aligned_cols=110 Identities=10% Similarity=0.007 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHHHHHHhCCCCEEEeccC----------CC---------------HHHHHHHHHHHHHhCCCccEEEEEE
Q 021144 163 LETLKEFHRRRVLILANSGADLIAFETI----------PN---------------KLEAKAYAELLEEEGITIPAWFSFN 217 (317)
Q Consensus 163 ~~el~~~h~~qi~~l~~~gvD~l~~ET~----------p~---------------~~Ea~a~~~~~~~~~~~~pv~iSf~ 217 (317)
.+++.+.|.+-++...++|.|.|=+--- |. .+-+..+++++++.-.+.||.+-++
T Consensus 166 I~~ii~~f~~AA~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V~vRls 245 (402)
T 2hsa_B 166 ISQVVEDYRRSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVS 245 (402)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhCCCcEEEEec
Confidence 3445667877788788899999844321 11 2224456666666422248888776
Q ss_pred EcCCC-cccCCCcHHHHHHH---hhcCCC------ceEEEEcCC-------Ch------h-hhHHHHHHHHhhCCCcEEE
Q 021144 218 SKDGI-NVVSGDSILECASI---ADSCEQ------VVAVGINCT-------SP------R-FIHGLILSVRKVTSKPVII 273 (317)
Q Consensus 218 ~~~~~-~l~~G~~l~~a~~~---~~~~~~------~~aiGvNC~-------~p------~-~~~~~l~~l~~~~~~pl~v 273 (317)
..+.. -+.+|.++++++.. +.+ .+ ++.|=+-.. .| . .-...++.+++..+.|+++
T Consensus 246 ~~~~~~g~~~~~~~~~~~~la~~le~-~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~~~iPvi~ 324 (402)
T 2hsa_B 246 PAIDHLDAMDSNPLSLGLAVVERLNK-IQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLRNAYQGTFIC 324 (402)
T ss_dssp SSCCSTTCCCSCHHHHHHHHHHHHHH-HHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHHHHHHHHHHHHHHCSSCEEE
T ss_pred cccccCCCCCCCCHHHHHHHHHHHHh-cCCccCCceEEEEEecCccccccCCccccccCCcchHHHHHHHHHHCCCCEEE
Confidence 54321 12345666655443 333 35 666655321 12 1 1245677788888889765
No 343
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=40.30 E-value=2.1e+02 Score=25.75 Aligned_cols=98 Identities=15% Similarity=0.086 Sum_probs=58.2
Q ss_pred HHHHHHhCCCCEEEeccCC----------------CHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHH
Q 021144 173 RVLILANSGADLIAFETIP----------------NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASI 236 (317)
Q Consensus 173 qi~~l~~~gvD~l~~ET~p----------------~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~ 236 (317)
-++.|.++||+.+-+|--. +..|+..-++++++.....++.|.-..+. .+ .+..++++++.
T Consensus 95 ~v~~l~~aGa~gv~iED~~~~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~~i~aRtda--~~-a~~g~~~ai~R 171 (290)
T 2hjp_A 95 VVPQYEAAGASAIVMEDKTFPKDTSLRTDGRQELVRIEEFQGKIAAATAARADRDFVVIARVEA--LI-AGLGQQEAVRR 171 (290)
T ss_dssp HHHHHHHHTCSEEEEECBCSSCCC-------CCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECT--TT-TTCCHHHHHHH
T ss_pred HHHHHHHhCCeEEEEcCCCCCccccccccCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehH--hh-ccccHHHHHHH
Confidence 3566777999999999643 34466655666665542344555544332 21 23447777655
Q ss_pred hhc--CCCceEEEEcC-CC-hhhhHHHHHHHHhhCCCcEEEEe
Q 021144 237 ADS--CEQVVAVGINC-TS-PRFIHGLILSVRKVTSKPVIIYP 275 (317)
Q Consensus 237 ~~~--~~~~~aiGvNC-~~-p~~~~~~l~~l~~~~~~pl~vyP 275 (317)
+.. ..++++|=+-| .. ++.+..+.+.+.. +.|+++-|
T Consensus 172 a~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~~--~vP~i~n~ 212 (290)
T 2hjp_A 172 GQAYEEAGADAILIHSRQKTPDEILAFVKSWPG--KVPLVLVP 212 (290)
T ss_dssp HHHHHHTTCSEEEECCCCSSSHHHHHHHHHCCC--SSCEEECG
T ss_pred HHHHHHcCCcEEEeCCCCCCHHHHHHHHHHcCC--CCCEEEec
Confidence 431 25889999999 63 5666555554421 27877644
No 344
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=40.23 E-value=87 Score=28.65 Aligned_cols=90 Identities=17% Similarity=0.059 Sum_probs=55.6
Q ss_pred hCCCCEEEeccC-CCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCC-CcHHHHHHHhhcCCCceEEEEcCC----C
Q 021144 179 NSGADLIAFETI-PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSG-DSILECASIADSCEQVVAVGINCT----S 252 (317)
Q Consensus 179 ~~gvD~l~~ET~-p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G-~~l~~a~~~~~~~~~~~aiGvNC~----~ 252 (317)
..|||.|.+=+- .+++++..+++.+++.+ ..+.+++. .-....+- .-+..+. .+ ..+++.|.+.=+ .
T Consensus 98 ~~Gvd~~ri~~~~~nle~~~~~v~~ak~~G--~~v~~~~~--~~~~~~~~~~~l~~~~-~~--~~G~~~i~l~Dt~G~~~ 170 (320)
T 3dxi_A 98 IGLVDMIRIAIDPQNIDRAIVLAKAIKTMG--FEVGFNVM--YMSKWAEMNGFLSKLK-AI--DKIADLFCMVDSFGGIT 170 (320)
T ss_dssp TTTCSEEEEEECGGGHHHHHHHHHHHHTTT--CEEEEEEC--CTTTGGGSTTSGGGGG-GG--TTTCSEEEEECTTSCCC
T ss_pred hcCCCEEEEEecHHHHHHHHHHHHHHHHCC--CEEEEEEE--eCCCCCCHHHHHHHHH-Hh--hCCCCEEEECcccCCCC
Confidence 389999966553 34677777777788766 55544443 21111111 1122222 12 246777777654 3
Q ss_pred hhhhHHHHHHHHhhCCCcEEEEe
Q 021144 253 PRFIHGLILSVRKVTSKPVIIYP 275 (317)
Q Consensus 253 p~~~~~~l~~l~~~~~~pl~vyP 275 (317)
|..+..+++.+++..+.||.+..
T Consensus 171 P~~~~~lv~~l~~~~~~~i~~H~ 193 (320)
T 3dxi_A 171 PKEVKNLLKEVRKYTHVPVGFHG 193 (320)
T ss_dssp HHHHHHHHHHHHHHCCSCEEEEC
T ss_pred HHHHHHHHHHHHHhCCCeEEEEe
Confidence 89999999999998888888774
No 345
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=40.10 E-value=39 Score=35.18 Aligned_cols=104 Identities=14% Similarity=0.070 Sum_probs=59.7
Q ss_pred CCHHHHHHHHHHHHHHHHh------CCCCEEEeccCC-----CHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCc
Q 021144 161 VSLETLKEFHRRRVLILAN------SGADLIAFETIP-----NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDS 229 (317)
Q Consensus 161 ~s~~el~~~h~~qi~~l~~------~gvD~l~~ET~p-----~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~ 229 (317)
++.+++.+.|+..++.+.+ .+.|++++|..- ...+ ....++++..+ .||++-...+ .| .
T Consensus 175 ~~~~~i~~~~~~~l~~~a~~~~~~~~~~D~vvVEGaGGl~~p~~~~-~~~adla~~l~--~PVILV~d~~------lG-~ 244 (831)
T 4a0g_A 175 VEDSVVLQMIEKCLKEEMECGVKSEKSDLLCLVETAGGVASPGPSG-TLQCDLYRPFR--LPGILVGDGR------LG-G 244 (831)
T ss_dssp CCHHHHHHHHHHHHHHHC---------CEEEEEECCSSTTCBCTTS-CBHHHHTGGGC--CCEEEECCCS------TT-H
T ss_pred CCHHHHHHHHHHHHHhhhhccccccccCCEEEEECCCCccCCCCCC-ccHHHHHHHcC--CCEEEEECCC------Cc-H
Confidence 5778888888765554432 168999999843 2222 12355666655 8998765332 22 2
Q ss_pred HHHHHH---Hhh-cCCCceEEEEcCCChhhhHHHHHHHHhhCCCcEEEEeC
Q 021144 230 ILECAS---IAD-SCEQVVAVGINCTSPRFIHGLILSVRKVTSKPVIIYPN 276 (317)
Q Consensus 230 l~~a~~---~~~-~~~~~~aiGvNC~~p~~~~~~l~~l~~~~~~pl~vyPN 276 (317)
+..++. .+. ....+.+|-+|-..+.....+.+.+.+. .|+.+.|-
T Consensus 245 i~~~~lt~~~l~~~g~~v~GvI~N~~~~~~~~~l~~~l~~~--~~v~vLg~ 293 (831)
T 4a0g_A 245 ISGTIAAYESLKLRGYDIAAVVFEDHGLVNEVPLTSYLRNK--VPVLVLPP 293 (831)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEEEECCSSCTHHHHHHHTTTS--SCEEEECC
T ss_pred HHHHHHHHHHHHHCCCcEEEEEEeCCchhHHHHHHHHHHhC--CCceeeCC
Confidence 333222 222 2245678888977777777777776653 45445443
No 346
>3obk_A Delta-aminolevulinic acid dehydratase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; HET: PBG; 2.50A {Toxoplasma gondii ME49}
Probab=39.88 E-value=13 Score=34.75 Aligned_cols=25 Identities=28% Similarity=0.325 Sum_probs=22.2
Q ss_pred CCChHHHHHHHHHHHHhhccccccc
Q 021144 51 VSSPHLVRKVHLDYLDAGANIIITA 75 (317)
Q Consensus 51 l~~Pe~V~~iH~~Yl~AGAdiI~Tn 75 (317)
++....|.+.+..+-+||||+|.|.
T Consensus 308 iD~~~~v~Esl~~~kRAGAd~IiTY 332 (356)
T 3obk_A 308 ISEKDTVLEVLKSFRRAGADAVATY 332 (356)
T ss_dssp SCHHHHHHHHHHHHHHHTCSEEEET
T ss_pred ccHHHHHHHHHHHHHHcCCCEEehh
Confidence 5677799999999999999999873
No 347
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=39.67 E-value=2.2e+02 Score=25.81 Aligned_cols=93 Identities=11% Similarity=0.052 Sum_probs=52.3
Q ss_pred HHHHHHHhCC--CCEEEeccC-CCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEE
Q 021144 172 RRVLILANSG--ADLIAFETI-PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGI 248 (317)
Q Consensus 172 ~qi~~l~~~g--vD~l~~ET~-p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGv 248 (317)
++++.+.+.| +|++.+.+- .+.......++.+++.....|++.. ...+++++....+ .++++|-+
T Consensus 109 ~~a~~~~~~g~~~~~i~i~~~~G~~~~~~~~i~~lr~~~~~~~vi~G----------~v~s~e~A~~a~~--aGad~Ivv 176 (336)
T 1ypf_A 109 EFVQQLAAEHLTPEYITIDIAHGHSNAVINMIQHIKKHLPESFVIAG----------NVGTPEAVRELEN--AGADATKV 176 (336)
T ss_dssp HHHHHHHHTTCCCSEEEEECSSCCSHHHHHHHHHHHHHCTTSEEEEE----------EECSHHHHHHHHH--HTCSEEEE
T ss_pred HHHHHHHhcCCCCCEEEEECCCCCcHHHHHHHHHHHHhCCCCEEEEC----------CcCCHHHHHHHHH--cCCCEEEE
Confidence 3577788888 999877541 1334445566677765423445421 1235666665554 36777766
Q ss_pred -cCCC------hh-------hhHHHHHHHHhhCCCcEEEEeCCC
Q 021144 249 -NCTS------PR-------FIHGLILSVRKVTSKPVIIYPNSG 278 (317)
Q Consensus 249 -NC~~------p~-------~~~~~l~~l~~~~~~pl~vyPNaG 278 (317)
|..+ +. ....+|.++++..+.|+ .+++|
T Consensus 177 s~hgG~~~~~~~~~~~g~~g~~~~~l~~v~~~~~ipV--Ia~GG 218 (336)
T 1ypf_A 177 GIGPGKVCITKIKTGFGTGGWQLAALRWCAKAASKPI--IADGG 218 (336)
T ss_dssp CSSCSTTCHHHHHHSCSSTTCHHHHHHHHHHTCSSCE--EEESC
T ss_pred ecCCCceeecccccCcCCchhHHHHHHHHHHHcCCcE--EEeCC
Confidence 2211 10 13456777777667785 45665
No 348
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=39.63 E-value=1.3e+02 Score=25.91 Aligned_cols=83 Identities=12% Similarity=0.029 Sum_probs=51.9
Q ss_pred HHHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCC
Q 021144 172 RRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCT 251 (317)
Q Consensus 172 ~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~ 251 (317)
++++...++|+|++..- ... ..++++.++.+ .|+++.. .++.++.+... .+++.|++
T Consensus 89 d~~~~A~~aGAd~v~~p---~~d--~~v~~~~~~~g--~~~i~G~-----------~t~~e~~~A~~--~Gad~vk~--- 145 (225)
T 1mxs_A 89 SMFAAVEAAGAQFVVTP---GIT--EDILEAGVDSE--IPLLPGI-----------STPSEIMMGYA--LGYRRFKL--- 145 (225)
T ss_dssp HHHHHHHHHTCSSEECS---SCC--HHHHHHHHHCS--SCEECEE-----------CSHHHHHHHHT--TTCCEEEE---
T ss_pred HHHHHHHHCCCCEEEeC---CCC--HHHHHHHHHhC--CCEEEee-----------CCHHHHHHHHH--CCCCEEEE---
Confidence 36777777899999743 322 24555566654 6776541 23567766554 58899999
Q ss_pred Ch-hhh--HHHHHHHHhhC-CCcEEEEeCCCC
Q 021144 252 SP-RFI--HGLILSVRKVT-SKPVIIYPNSGE 279 (317)
Q Consensus 252 ~p-~~~--~~~l~~l~~~~-~~pl~vyPNaG~ 279 (317)
-| ..+ ...|+.++... +.|+ .|=+|-
T Consensus 146 FPa~~~~G~~~lk~i~~~~~~ipv--vaiGGI 175 (225)
T 1mxs_A 146 FPAEISGGVAAIKAFGGPFGDIRF--CPTGGV 175 (225)
T ss_dssp TTHHHHTHHHHHHHHHTTTTTCEE--EEBSSC
T ss_pred ccCccccCHHHHHHHHhhCCCCeE--EEECCC
Confidence 44 222 56778887765 5665 566664
No 349
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=39.50 E-value=1.7e+02 Score=27.77 Aligned_cols=66 Identities=17% Similarity=0.112 Sum_probs=39.7
Q ss_pred HHHHHHHhCCCCEEEeccCC-CHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEc
Q 021144 172 RRVLILANSGADLIAFETIP-NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGIN 249 (317)
Q Consensus 172 ~qi~~l~~~gvD~l~~ET~p-~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvN 249 (317)
++++.+.++|+|.|.+.+.. +.......+..+++..+++|++.- .. .+.+.+...++ .++++|-+.
T Consensus 236 ~~a~~l~~~G~d~ivi~~a~g~~~~~~~~i~~l~~~~p~~pvi~G-------~v---~t~~~a~~~~~--~Gad~I~vg 302 (491)
T 1zfj_A 236 ERAEALFEAGADAIVIDTAHGHSAGVLRKIAEIRAHFPNRTLIAG-------NI---ATAEGARALYD--AGVDVVKVG 302 (491)
T ss_dssp HHHHHHHHHTCSEEEECCSCTTCHHHHHHHHHHHHHCSSSCEEEE-------EE---CSHHHHHHHHH--TTCSEEEEC
T ss_pred HHHHHHHHcCCCeEEEeeecCcchhHHHHHHHHHHHCCCCcEeCC-------Cc---cCHHHHHHHHH--cCCCEEEEC
Confidence 67888989999999998742 233344445555554336888722 11 12344544444 467777665
No 350
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=39.22 E-value=95 Score=27.68 Aligned_cols=45 Identities=24% Similarity=0.375 Sum_probs=27.7
Q ss_pred ccCCCcHHHHHHHhhcCCCceEEEEcCCChhhhHHHHHHHHhh-CCCcEEE--EeCC
Q 021144 224 VVSGDSILECASIADSCEQVVAVGINCTSPRFIHGLILSVRKV-TSKPVII--YPNS 277 (317)
Q Consensus 224 l~~G~~l~~a~~~~~~~~~~~aiGvNC~~p~~~~~~l~~l~~~-~~~pl~v--yPNa 277 (317)
+.||..++++.....+. + +....+..+++++++. .+.|+++ |-|-
T Consensus 61 ~aDGpvIq~a~~rAL~~-G--------~~~~~~~~~v~~~r~~~~~~Pivlm~Y~n~ 108 (271)
T 3nav_A 61 LADGPTIQGANLRALAA-K--------TTPDICFELIAQIRARNPETPIGLLMYANL 108 (271)
T ss_dssp GGCCSHHHHHHHHHHHT-T--------CCHHHHHHHHHHHHHHCTTSCEEEEECHHH
T ss_pred CCCCHHHHHHHHHHHHc-C--------CCHHHHHHHHHHHHhcCCCCCEEEEecCcH
Confidence 55787777766554432 2 3455666777777765 5677655 6563
No 351
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=39.16 E-value=46 Score=30.15 Aligned_cols=45 Identities=13% Similarity=0.203 Sum_probs=32.3
Q ss_pred HHHHHHHHHHhCCCCEEEecc--CCCHHHHHHHHHHHHHhCCCccEEEEE
Q 021144 169 FHRRRVLILANSGADLIAFET--IPNKLEAKAYAELLEEEGITIPAWFSF 216 (317)
Q Consensus 169 ~h~~qi~~l~~~gvD~l~~ET--~p~~~Ea~a~~~~~~~~~~~~pv~iSf 216 (317)
.|.+.+...+++|..++ +|- -.+++|++.+++++++.+ +++++.+
T Consensus 93 ~H~~~~~~al~aGkhVl-~EKP~a~~~~e~~~l~~~a~~~g--~~~~v~~ 139 (330)
T 4ew6_A 93 YRYEAAYKALVAGKHVF-LEKPPGATLSEVADLEALANKQG--ASLFASW 139 (330)
T ss_dssp HHHHHHHHHHHTTCEEE-ECSSSCSSHHHHHHHHHHHHHHT--CCEEECC
T ss_pred HHHHHHHHHHHcCCcEE-EeCCCCCCHHHHHHHHHHHHhcC--CeEEEEe
Confidence 57777777777887766 574 347888888888888765 6666555
No 352
>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A*
Probab=39.02 E-value=21 Score=31.18 Aligned_cols=42 Identities=24% Similarity=0.419 Sum_probs=26.4
Q ss_pred HHHHHHHhhcCCCceEEEEcCCChhhh------HHHHHHHHhhCCCcEE
Q 021144 230 ILECASIADSCEQVVAVGINCTSPRFI------HGLILSVRKVTSKPVI 272 (317)
Q Consensus 230 l~~a~~~~~~~~~~~aiGvNC~~p~~~------~~~l~~l~~~~~~pl~ 272 (317)
+.++++.+.. .++++|.++|+....+ ..+.+.+++..+.|++
T Consensus 55 l~~aa~~L~~-ag~d~i~~aCtsas~~~G~~~~~~~~~~l~~~~~iPv~ 102 (240)
T 3ixl_A 55 VVDHARRLQK-QGAAVVSLMCTSLSFYRGAAFNAALTVAMREATGLPCT 102 (240)
T ss_dssp HHHHHHHHHH-TTEEEEEECCHHHHHTTCHHHHHHHHHHHHHHHSSCEE
T ss_pred HHHHHHHhcc-CCCCEEEECCcHHHHhcccchHHHHHHHHHhccCCCEE
Confidence 4556666655 4899999999653332 3555666665566654
No 353
>1w5q_A Delta-aminolevulinic acid dehydratase; synthase, evolution, metalloenzyme, porphobilinogen synthase, protein engineering,; 1.4A {Pseudomonas aeruginosa} PDB: 1w5p_A* 1w5o_A 1w5n_A 1w56_A 1w5m_A 1w54_A 1gzg_A* 1b4k_A 2woq_A* 2c14_A* 2c16_A* 2c19_A* 2c15_A* 2c18_A* 2c13_A*
Probab=39.01 E-value=15 Score=34.10 Aligned_cols=24 Identities=21% Similarity=0.286 Sum_probs=21.7
Q ss_pred CCChHHHHHHHHHHHHhhccccccc
Q 021144 51 VSSPHLVRKVHLDYLDAGANIIITA 75 (317)
Q Consensus 51 l~~Pe~V~~iH~~Yl~AGAdiI~Tn 75 (317)
++ ...|.+.+..+-+||||+|.|.
T Consensus 301 iD-~~~v~Esl~~~kRAGAd~IiTY 324 (337)
T 1w5q_A 301 LA-ESVILESLTAFKRAGADGILTY 324 (337)
T ss_dssp SC-TTHHHHHHHHHHHHTCSEEEET
T ss_pred cc-HHHHHHHHHHHHhcCCCEEeee
Confidence 67 7899999999999999999874
No 354
>3sy1_A UPF0001 protein YGGS; engineered protein, structural genomics, PSI-biology, protei structure initiative; HET: MES; 1.47A {Escherichia coli} PDB: 1w8g_A*
Probab=38.89 E-value=69 Score=28.02 Aligned_cols=67 Identities=19% Similarity=0.105 Sum_probs=43.4
Q ss_pred CCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHH---HHHHhhcCCCceEEEEcCC
Q 021144 182 ADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILE---CASIADSCEQVVAVGINCT 251 (317)
Q Consensus 182 vD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~---a~~~~~~~~~~~aiGvNC~ 251 (317)
+|+ +.|+.++..++.+-+.+++.+...+|++.+.... ...+.|.++++ .++.+...+++...|+-|.
T Consensus 98 ~~~--i~sVds~~~a~~l~~~a~~~~~~~~V~lqVntG~-e~~R~G~~~ee~~~l~~~i~~~~~l~l~Glmt~ 167 (245)
T 3sy1_A 98 FDW--CITIDRLRIATRLNDQRPAELPPLNVLIQINISD-ENSKSGIQLAELDELAAAVAELPRLRLRGLSAI 167 (245)
T ss_dssp CSE--EEEECCHHHHHHHHHHSCTTSCCEEEEEEBCCSC-TTCCSSBCGGGHHHHHHHHTTCTTEEEEEEECC
T ss_pred CCE--EEecCCHHHHHHHHHHHHHcCCCceEEEEEECCC-CcCCcCCCHHHHHHHHHHHHcCCCCeEEEEEEe
Confidence 465 4789999999888877766554466776664421 13446755544 4444555567888999774
No 355
>2yv4_A Hypothetical protein PH0435; alpha and beta proteins (A+B), SUA5 domain, structural genom NPPSFA; 2.00A {Pyrococcus horikoshii}
Probab=38.88 E-value=56 Score=24.79 Aligned_cols=45 Identities=16% Similarity=0.189 Sum_probs=31.3
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHh
Q 021144 162 SLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEE 206 (317)
Q Consensus 162 s~~el~~~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~ 206 (317)
+.+++....-.-++.|-+.|+|.|++|.+|.-..-.++..-+++.
T Consensus 53 ~~~~~A~~Lf~~LR~~D~~~~~~I~~e~~p~~g~g~Ai~nRL~kA 97 (105)
T 2yv4_A 53 SVEEVAKNLFKALRYMDKAGVDVVIAEGVEERGLGLAVMNRLRKA 97 (105)
T ss_dssp SHHHHHHHHHHHHHHHHHTTCSEEEEEEESGGGHHHHHHHHC---
T ss_pred CHHHHHHHHHHHHHHHHhCCCCEEEEeCCCCcChHHHHHHHHHHh
Confidence 455555444446777877899999999999877777777666654
No 356
>1zuw_A Glutamate racemase 1; (R)-glutamate, peptidoglycan biosynthesi isomerase; HET: DGL; 1.75A {Bacillus subtilis}
Probab=38.24 E-value=71 Score=28.23 Aligned_cols=31 Identities=10% Similarity=0.103 Sum_probs=26.4
Q ss_pred CCHHHHHHHHHHHHHHHHh-CCCCEEEe--ccCC
Q 021144 161 VSLETLKEFHRRRVLILAN-SGADLIAF--ETIP 191 (317)
Q Consensus 161 ~s~~el~~~h~~qi~~l~~-~gvD~l~~--ET~p 191 (317)
.+.+++.++-.+.++.|.+ .|+|+|++ -|.+
T Consensus 45 ~s~~~i~~~~~~~~~~L~~~~g~d~iViACNTas 78 (272)
T 1zuw_A 45 RPEEEVLQYTWELTNYLLENHHIKMLVIACNTAT 78 (272)
T ss_dssp SCHHHHHHHHHHHHHHHHHHSCCSEEEECCHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhhcCCCEEEEeCchhh
Confidence 5789999998888999999 99999987 4555
No 357
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=38.16 E-value=1.1e+02 Score=26.63 Aligned_cols=135 Identities=14% Similarity=0.069 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHHHHhCCCCEEEeccCC--------CHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHH
Q 021144 165 TLKEFHRRRVLILANSGADLIAFETIP--------NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASI 236 (317)
Q Consensus 165 el~~~h~~qi~~l~~~gvD~l~~ET~p--------~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~ 236 (317)
.+.+.+++.++...+.||. |++|+++ +..++..+++ +.+ .| .+.++++-..-...|.++.+.++.
T Consensus 148 ~~~~~l~~l~~~a~~~gv~-l~lEn~~~~~~~~~~~~~~~~~l~~---~v~--~~-~vg~~~D~~H~~~~g~d~~~~l~~ 220 (309)
T 2hk0_A 148 RGVEGINGIADFANDLGIN-LCIEVLNRFENHVLNTAAEGVAFVK---DVG--KN-NVKVMLDTFHMNIEEDSFGDAIRT 220 (309)
T ss_dssp HHHHHHHHHHHHHHHTTCE-EEEECCCTTTCSSCCSHHHHHHHHH---HHT--CT-TEEEEEEHHHHHHHCSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCE-EEEeecccccccccCCHHHHHHHHH---HcC--CC-CeEEEEehhhHhhcCcCHHHHHHH
Confidence 3444555555555567885 6679984 5666665554 433 22 123333322223357788888776
Q ss_pred hhcCCCceEEEEcCC-------ChhhhHHHHHHHHhhC-CCcEEEEeCCCC--ccccccccccccC-CCC---hhhHHHH
Q 021144 237 ADSCEQVVAVGINCT-------SPRFIHGLILSVRKVT-SKPVIIYPNSGE--TYNAELKKWVVSF-SLH---FFPLELI 302 (317)
Q Consensus 237 ~~~~~~~~aiGvNC~-------~p~~~~~~l~~l~~~~-~~pl~vyPNaG~--~~d~~~~~w~~~~-~~~---~~~~~~~ 302 (317)
+.. .+..|=++-. +.-....+++.|++.. +.++++-..... .+...-+.|.... ..+ |.+.+..
T Consensus 221 ~~~--~i~~vHl~D~~r~~~G~G~id~~~~~~~L~~~gy~g~i~lE~~~~~~~~~~~~i~~~r~~~~~~~~~~~~~~~~~ 298 (309)
T 2hk0_A 221 AGP--LLGHFHTGESNRRVPGKGRMPWHEIGLALRDINYTGAVIMEPFVKTGGTIGSDIKVWRDLSGGADIAKMDEDARN 298 (309)
T ss_dssp HGG--GEEEEEECCTTSCCTTSSCCCHHHHHHHHHHTTCCSEEEECCCCCCSHHHHHHTTCCSCCSCSCCHHHHHHHHHH
T ss_pred HHh--hEEEEEeCCCCCCCCcCCccCHHHHHHHHHHcCCCCcEEEEecCCccchhcchhhhhccccCCCCcccHHHHHHH
Confidence 642 3444444321 1123566777776642 457776554321 0001123454221 235 6666776
Q ss_pred HHHHHH
Q 021144 303 LNPFAS 308 (317)
Q Consensus 303 ~~~w~~ 308 (317)
..+|++
T Consensus 299 s~~~l~ 304 (309)
T 2hk0_A 299 ALAFSR 304 (309)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666665
No 358
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=38.09 E-value=51 Score=28.41 Aligned_cols=40 Identities=23% Similarity=0.151 Sum_probs=25.8
Q ss_pred HHHHHhCCCCEEEeccC--CCHHHHHHHHHHHHHhCCCccEEEEE
Q 021144 174 VLILANSGADLIAFETI--PNKLEAKAYAELLEEEGITIPAWFSF 216 (317)
Q Consensus 174 i~~l~~~gvD~l~~ET~--p~~~Ea~a~~~~~~~~~~~~pv~iSf 216 (317)
++.+.++|+|.+.+=-- +. ++....++.+++.+ +.+.+++
T Consensus 78 i~~~~~aGadgv~vh~e~~~~-~~~~~~~~~i~~~g--~~~gv~~ 119 (230)
T 1tqj_A 78 VEDFAKAGADIISVHVEHNAS-PHLHRTLCQIRELG--KKAGAVL 119 (230)
T ss_dssp HHHHHHHTCSEEEEECSTTTC-TTHHHHHHHHHHTT--CEEEEEE
T ss_pred HHHHHHcCCCEEEECcccccc-hhHHHHHHHHHHcC--CcEEEEE
Confidence 56677789999944322 22 34556677777765 6666666
No 359
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=37.92 E-value=2.3e+02 Score=25.52 Aligned_cols=99 Identities=15% Similarity=0.128 Sum_probs=62.0
Q ss_pred HHHHHhCCCCEEEeccCC----------------CHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHh
Q 021144 174 VLILANSGADLIAFETIP----------------NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIA 237 (317)
Q Consensus 174 i~~l~~~gvD~l~~ET~p----------------~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~ 237 (317)
++.|.++||+.+-+|--. ...|...-++++++.....++.|.-..+. .+ -+..++++++.+
T Consensus 100 v~~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~~~~~~i~aRtda--~~-a~~g~~~ai~Ra 176 (295)
T 1s2w_A 100 VRKLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIEEFALKIKACKDSQTDPDFCIVARVEA--FI-AGWGLDEALKRA 176 (295)
T ss_dssp HHHHHHTTCCEEEEECBCC--------CTTCCBCCHHHHHHHHHHHHHHCSSTTCEEEEEECT--TT-TTCCHHHHHHHH
T ss_pred HHHHHHcCCcEEEECCCCCCccccccCCCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehH--Hh-ccccHHHHHHHH
Confidence 666778999999999653 34466665666665543345555554432 21 234477776554
Q ss_pred hc--CCCceEEEEcC-CC-hhhhHHHHHHHHhhCCCcEEEEeCC
Q 021144 238 DS--CEQVVAVGINC-TS-PRFIHGLILSVRKVTSKPVIIYPNS 277 (317)
Q Consensus 238 ~~--~~~~~aiGvNC-~~-p~~~~~~l~~l~~~~~~pl~vyPNa 277 (317)
.. ..|+++|=+-| .. ++.+..+.+.+.. ..|+++-|..
T Consensus 177 ~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~~--~~P~i~~~~~ 218 (295)
T 1s2w_A 177 EAYRNAGADAILMHSKKADPSDIEAFMKAWNN--QGPVVIVPTK 218 (295)
T ss_dssp HHHHHTTCSEEEECCCSSSSHHHHHHHHHHTT--CSCEEECCST
T ss_pred HHHHHcCCCEEEEcCCCCCHHHHHHHHHHcCC--CCCEEEeCCC
Confidence 31 25889999998 43 6676666666542 3788877764
No 360
>4dnh_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati YORK structural genomics research consortium; 2.50A {Sinorhizobium meliloti}
Probab=37.77 E-value=2.1e+02 Score=26.66 Aligned_cols=127 Identities=20% Similarity=0.273 Sum_probs=71.7
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCCCeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHH
Q 021144 88 GFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLK 167 (317)
Q Consensus 88 g~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~~~~~~~~~~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~ 167 (317)
|++=..++||+++++.-|+.. . ...|+--+|- +.|.+| +..+.+++.
T Consensus 90 GLDW~~a~ELIrRs~aeA~~~---------------------p--g~~ia~G~GT--DqL~~~--------~~~~l~~V~ 136 (396)
T 4dnh_A 90 GLGWPEARELIRRSLAEARGR---------------------P--DALIACGAGT--DHLAPG--------PDVSIDDIL 136 (396)
T ss_dssp TBCHHHHHHHHHHHHHHHHTS---------------------S--SCCEEEEECC--TTSCCC--------TTCCHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHhcC---------------------C--CCeeeeccCc--CCCCCC--------CCCCHHHHH
Confidence 555556788888888766521 0 1234443442 223321 224899999
Q ss_pred HHHHHHHHHHHhCCCCEEEeccCCCHHHHHHH----------HHHHHHhCCCccEEEEEEEcC-CCccc--CC-CcHHHH
Q 021144 168 EFHRRRVLILANSGADLIAFETIPNKLEAKAY----------AELLEEEGITIPAWFSFNSKD-GINVV--SG-DSILEC 233 (317)
Q Consensus 168 ~~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~----------~~~~~~~~~~~pv~iSf~~~~-~~~l~--~G-~~l~~a 233 (317)
..|++|++...+.|.-+|+.- |-.=++++ -+++++. +.||++..-=+- +..|. -| .++.++
T Consensus 137 ~AY~EQ~~~Ve~~G~~~ILMA---SRaLA~~A~~pdDY~~VY~~vL~q~--~~PVILHWLG~mFDPaL~GYWGs~d~~~A 211 (396)
T 4dnh_A 137 AAYESQIEAIEAEGGRIILMA---SRALAAAAKGPEDYIRVYDRVLSQV--KEPVIIHWLGEMFDPALEGYWGNADHMAA 211 (396)
T ss_dssp HHHHHHHHHHHHTTCCEEECC---CHHHHHHCCSHHHHHHHHHHHHHHC--SSCEEEEEECTTTCGGGTTTTSCSSHHHH
T ss_pred HHHHHHHHHHHHcCCeEEEeh---hHHHHHHhCCHHHHHHHHHHHHHhc--CCCEEEEecccccChhhccccCCCCHHHH
Confidence 999999999999999999733 33222221 2334543 589998873111 11111 12 345544
Q ss_pred HHH----hhc-CCCceEEEEcCCC
Q 021144 234 ASI----ADS-CEQVVAVGINCTS 252 (317)
Q Consensus 234 ~~~----~~~-~~~~~aiGvNC~~ 252 (317)
... +.. ...+++|=|.--.
T Consensus 212 ~~t~l~lI~~~~~kVDGIKiSLLD 235 (396)
T 4dnh_A 212 MKTCLDVLEAHAAKVDGIKISLLS 235 (396)
T ss_dssp HHHHHHHHHHTGGGEEEEEEESCC
T ss_pred HHHHHHHHHhChhhcCceEEeeec
Confidence 433 322 2457777776544
No 361
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=37.53 E-value=1.1e+02 Score=26.10 Aligned_cols=137 Identities=11% Similarity=0.061 Sum_probs=70.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCEEEeccCC--------CHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHH
Q 021144 164 ETLKEFHRRRVLILANSGADLIAFETIP--------NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECAS 235 (317)
Q Consensus 164 ~el~~~h~~qi~~l~~~gvD~l~~ET~p--------~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~ 235 (317)
+.+.+..++.++...+.||. |++|+++ +..++..++ ++.+ .| .+.++++-......|.++.+.++
T Consensus 129 ~~~~~~l~~l~~~a~~~gv~-l~lEn~~~~~~~~~~~~~~~~~l~---~~~~--~~-~~g~~~D~~h~~~~g~d~~~~l~ 201 (290)
T 2qul_A 129 DRAIESVRRVIKVAEDYGII-YALEVVNRFEQWLCNDAKEAIAFA---DAVD--SP-ACKVQLDTFHMNIEETSFRDAIL 201 (290)
T ss_dssp HHHHHHHHTTHHHHHHHTCE-EEEECCCTTTCSSCCSHHHHHHHH---HHHC--CT-TEEEEEEHHHHHHHCSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCE-EEEEeCccccccccCCHHHHHHHH---HHcC--CC-CEEEEEEchhhhhcCCCHHHHHH
Confidence 34455555555555567885 6679875 456655544 4443 22 12333332222335788888887
Q ss_pred HhhcCCCceEEEEcCC-------ChhhhHHHHHHHHhhC-CCcEEEEeCCCC--cccccccccccc--CCC--ChhhHHH
Q 021144 236 IADSCEQVVAVGINCT-------SPRFIHGLILSVRKVT-SKPVIIYPNSGE--TYNAELKKWVVS--FSL--HFFPLEL 301 (317)
Q Consensus 236 ~~~~~~~~~aiGvNC~-------~p~~~~~~l~~l~~~~-~~pl~vyPNaG~--~~d~~~~~w~~~--~~~--~~~~~~~ 301 (317)
.+. ..+..|=++=. +--....+++.+++.. +.++++-..... .+-.....|... +.. +|.+.+.
T Consensus 202 ~~~--~~i~~vH~~D~~~~~~G~G~id~~~~~~~L~~~gy~g~~~lE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (290)
T 2qul_A 202 ACK--GKMGHFHLGEANRLPPGEGRLPWDEIFGALKEIGYDGTIVMEPFMRKGGSVSRAVGVWRDMSNGATDEEMDERAR 279 (290)
T ss_dssp HTT--TTEEEEEECCTTSCCTTSSCSCHHHHHHHHHHTTCCSCEEECCCCCCSSHHHHHTTCCSCCSTTCCHHHHHHHHH
T ss_pred HHH--hheeEEEEccCCCCCCCCCCcCHHHHHHHHHHhCCCceEEEEecCcccchhhhhhhhccccccCCCCCCHHHHHH
Confidence 663 23444444321 1123566777776643 567777554321 111112345421 123 5667777
Q ss_pred HHHHHHHc
Q 021144 302 ILNPFASC 309 (317)
Q Consensus 302 ~~~~w~~~ 309 (317)
.+.++++.
T Consensus 280 ~s~~~l~~ 287 (290)
T 2qul_A 280 RSLQFVRD 287 (290)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77777653
No 362
>1us2_A Xylanase10C, endo-beta-1,4-xylanase; hydrolase, carbohydrate binding module, xylan degradation; HET: XYP; 1.85A {Cellvibrio japonicus} SCOP: b.18.1.11 c.1.8.3 PDB: 1us3_A
Probab=37.50 E-value=61 Score=31.99 Aligned_cols=50 Identities=12% Similarity=0.102 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHhCC--CCEEEec-----cCCCHHHHHHHHHHHHHhCCCccEEEE-EEEc
Q 021144 168 EFHRRRVLILANSG--ADLIAFE-----TIPNKLEAKAYAELLEEEGITIPAWFS-FNSK 219 (317)
Q Consensus 168 ~~h~~qi~~l~~~g--vD~l~~E-----T~p~~~Ea~a~~~~~~~~~~~~pv~iS-f~~~ 219 (317)
+.+..+++.|.+.| +|.|-+. ..|+..+++..++.+...+ +|++|| +.+.
T Consensus 360 ~~~~~lVk~l~~~GvpIDGIG~Q~H~~~~~p~~~~i~~~L~~~a~lG--lpI~ITElDv~ 417 (530)
T 1us2_A 360 TKMVDMVKDFQARSIPIDGVGFQMHVCMNYPSIANISAAMKKVVDLG--LLVKITELDVA 417 (530)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEEESSCSCHHHHHHHHHHHHTTT--CEEEEEEEEEE
T ss_pred HHHHHHHHHHHHCCCceeEEEEeeecCCCCCCHHHHHHHHHHHHhcC--CeEEEEeCccC
Confidence 34556788887777 5999775 3578999999998888766 999998 4443
No 363
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=37.22 E-value=2.3e+02 Score=25.47 Aligned_cols=74 Identities=11% Similarity=-0.013 Sum_probs=47.2
Q ss_pred HHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCCC
Q 021144 173 RVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTS 252 (317)
Q Consensus 173 qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~~ 252 (317)
.+.+..++|.-.++.-...+.++++..++.+++.. +.|+-+.+.+.+ ..+.+.++.+.+ .+++.|-+++..
T Consensus 42 la~av~~aGglG~i~~~~~~~~~l~~~i~~i~~~~-~~p~gVnl~~~~-------~~~~~~~~~~~~-~g~d~V~l~~g~ 112 (326)
T 3bo9_A 42 LAAAVSEAGGLGIIGSGAMKPDDLRKAISELRQKT-DKPFGVNIILVS-------PWADDLVKVCIE-EKVPVVTFGAGN 112 (326)
T ss_dssp HHHHHHHTTSBEEEECTTCCHHHHHHHHHHHHTTC-SSCEEEEEETTS-------TTHHHHHHHHHH-TTCSEEEEESSC
T ss_pred HHHHHHhCCCcEEeCCCCCCHHHHHHHHHHHHHhc-CCCEEEEEeccC-------CCHHHHHHHHHH-CCCCEEEECCCC
Confidence 34455666765555555567888888888788754 578888876522 234566666554 467777777765
Q ss_pred hhh
Q 021144 253 PRF 255 (317)
Q Consensus 253 p~~ 255 (317)
|..
T Consensus 113 p~~ 115 (326)
T 3bo9_A 113 PTK 115 (326)
T ss_dssp CHH
T ss_pred cHH
Confidence 633
No 364
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=37.21 E-value=93 Score=26.90 Aligned_cols=88 Identities=10% Similarity=0.041 Sum_probs=52.8
Q ss_pred HHHHHHHhCCCCEEEec-----cCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCC--------------cccCCC-cHH
Q 021144 172 RRVLILANSGADLIAFE-----TIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGI--------------NVVSGD-SIL 231 (317)
Q Consensus 172 ~qi~~l~~~gvD~l~~E-----T~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~--------------~l~~G~-~l~ 231 (317)
+.++.+.++|+|.+-+- .+|++..-..+++.+++..+++|+-+-+-+.+.+ +..... .+.
T Consensus 22 ~~i~~~~~~g~d~iHvDvmDg~fvpn~t~G~~~v~~lr~~~p~~~~dvhLmv~dp~~~i~~~~~Ad~itvH~ea~~~~~~ 101 (227)
T 1tqx_A 22 EETQRMESLGAEWIHLDVMDMHFVPNLSFGPPVINNLKKYTKSIFFDVHLMVEYPEKYVPLLKTSNQLTFHFEALNEDTE 101 (227)
T ss_dssp HHHHHHHHTTCSEEEEEEEBSSSSSCBCCCHHHHHHHGGGCSSCEEEEEEESSCGGGGGGGCTTSSEEEEEGGGGTTCHH
T ss_pred HHHHHHHHcCCCEEEEEEEeCCcCcchhcCHHHHHHHHHhCCCCcEEEEEEEcCHHHHHHHHHhCCEEEEeecCCccCHH
Confidence 35667777888875332 3467766567777888765468988888776632 222233 566
Q ss_pred HHHH---HhhcCCCceEEEEcCCCh-hhhHHH
Q 021144 232 ECAS---IADSCEQVVAVGINCTSP-RFIHGL 259 (317)
Q Consensus 232 ~a~~---~~~~~~~~~aiGvNC~~p-~~~~~~ 259 (317)
.+++ .+++..--.++-+|...| +.+..+
T Consensus 102 ~~i~~~~~i~~~G~k~gvalnp~tp~~~~~~~ 133 (227)
T 1tqx_A 102 RCIQLAKEIRDNNLWCGISIKPKTDVQKLVPI 133 (227)
T ss_dssp HHHHHHHHHHTTTCEEEEEECTTSCGGGGHHH
T ss_pred HHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHH
Confidence 7777 766532234566666544 444433
No 365
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=37.18 E-value=2.3e+02 Score=25.48 Aligned_cols=151 Identities=12% Similarity=0.031 Sum_probs=67.8
Q ss_pred CeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEecc---CC------CHHHHHHHHHHH
Q 021144 133 PVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFET---IP------NKLEAKAYAELL 203 (317)
Q Consensus 133 ~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~ET---~p------~~~Ea~a~~~~~ 203 (317)
+.+|-|=+-=+.+...||+.|. +.+++. ++++.+++.|+|+|=+-- -| .-+|++-++.++
T Consensus 28 ~~~iMGIlNvTPDSFsdgg~~~-------~~~~a~----~~a~~~v~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI 96 (294)
T 2dqw_A 28 RVRLLGVLNLTPDSFSDGGRYL-------DPERAL----ERAREMVAEGADILDLGAESTRPGAAPVPVEEEKRRLLPVL 96 (294)
T ss_dssp SCEEEEEEECCC--------------------CCH----HHHHHHHHHTCSEEEEECC-----------CCHHHHHHHHH
T ss_pred CceEEEEEeCCCCCCCCCCCCC-------CHHHHH----HHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHH
Confidence 4578888877777777776542 223333 356677789999995443 22 245555555444
Q ss_pred HHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCCChhhhHHHHHHHHhhCCCcEEEEeCC-CCccc
Q 021144 204 EEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPRFIHGLILSVRKVTSKPVIIYPNS-GETYN 282 (317)
Q Consensus 204 ~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~~p~~~~~~l~~l~~~~~~pl~vyPNa-G~~~d 282 (317)
+.... ..+.+|+- -...+-+-+.++. +++ -||=.+.......++..++ .+.|+++.++. |.+.+
T Consensus 97 ~~l~~-~~vpiSID---------T~~~~Va~aAl~a--Ga~--iINdVsg~~d~~m~~v~a~-~~~~vVlmh~~eG~p~t 161 (294)
T 2dqw_A 97 EAVLS-LGVPVSVD---------TRKPEVAEEALKL--GAH--LLNDVTGLRDERMVALAAR-HGVAAVVMHMPVPDPAT 161 (294)
T ss_dssp HHHHT-TCSCEEEE---------CSCHHHHHHHHHH--TCS--EEECSSCSCCHHHHHHHHH-HTCEEEEECCSSSCTTT
T ss_pred HHHHh-CCCeEEEE---------CCCHHHHHHHHHh--CCC--EEEECCCCCChHHHHHHHH-hCCCEEEEcCCCCCCcc
Confidence 44211 13344552 2222222222332 333 3565432222333443333 37899999998 75422
Q ss_pred cccccccccCC-C---ChhhHHHHHHHHHHcccc
Q 021144 283 AELKKWVVSFS-L---HFFPLELILNPFASCRLI 312 (317)
Q Consensus 283 ~~~~~w~~~~~-~---~~~~~~~~~~~w~~~~~~ 312 (317)
-. -...|+ . --+.+.+.+....+.|+=
T Consensus 162 m~---~~~~y~dv~~ev~~~l~~~i~~a~~~Gi~ 192 (294)
T 2dqw_A 162 MM---AHARYRDVVAEVKAFLEAQARRALSAGVP 192 (294)
T ss_dssp GG---GGCCCSSHHHHHHHHHHHHHHHHHHTTCS
T ss_pred cc---ccCccccHHHHHHHHHHHHHHHHHHCCCC
Confidence 11 111221 0 013455566666777763
No 366
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=37.03 E-value=58 Score=28.93 Aligned_cols=45 Identities=16% Similarity=0.119 Sum_probs=34.2
Q ss_pred HHHHHHHHHHhCCCCEEEecc--CCCHHHHHHHHHHHHHhCCCccEEEEE
Q 021144 169 FHRRRVLILANSGADLIAFET--IPNKLEAKAYAELLEEEGITIPAWFSF 216 (317)
Q Consensus 169 ~h~~qi~~l~~~gvD~l~~ET--~p~~~Ea~a~~~~~~~~~~~~pv~iSf 216 (317)
.|.+++..++++|..+|. |- -.+++|++.+++++++.+ +++++.+
T Consensus 77 ~H~~~~~~al~aGkhVl~-EKPla~~~~ea~~l~~~a~~~g--~~~~~~~ 123 (294)
T 1lc0_A 77 SHEDYIRQFLQAGKHVLV-EYPMTLSFAAAQELWELAAQKG--RVLHEEH 123 (294)
T ss_dssp GHHHHHHHHHHTTCEEEE-ESCSCSCHHHHHHHHHHHHHTT--CCEEEEC
T ss_pred hHHHHHHHHHHCCCcEEE-eCCCCCCHHHHHHHHHHHHHhC--CEEEEEE
Confidence 477788888888987665 84 347899999999888865 6676665
No 367
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=37.03 E-value=63 Score=29.32 Aligned_cols=56 Identities=14% Similarity=0.148 Sum_probs=32.4
Q ss_pred HhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEc
Q 021144 178 ANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGIN 249 (317)
Q Consensus 178 ~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvN 249 (317)
+++|+|+|.+-++ ++++++.+++.+. .+.|+.+| .|-+++.+.+.+. .+++.|++-
T Consensus 225 ~~aGaD~I~ld~~-~~e~l~~~v~~~~---~~~~I~AS----------GGIt~~~i~~~a~--~GvD~isvG 280 (296)
T 1qap_A 225 LKAGADIIMLDNF-NTDQMREAVKRVN---GQARLEVS----------GNVTAETLREFAE--TGVDFISVG 280 (296)
T ss_dssp HHTTCSEEEESSC-CHHHHHHHHHTTC---TTCCEEEC----------CCSCHHHHHHHHH--TTCSEEECS
T ss_pred HHcCCCEEEECCC-CHHHHHHHHHHhC---CCCeEEEE----------CCCCHHHHHHHHH--cCCCEEEEe
Confidence 4567888888774 3566665554332 13444433 3556666665554 367777763
No 368
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=37.02 E-value=48 Score=29.76 Aligned_cols=25 Identities=12% Similarity=0.122 Sum_probs=11.7
Q ss_pred hCCCCEEEeccCCCHHHHHHHHHHHH
Q 021144 179 NSGADLIAFETIPNKLEAKAYAELLE 204 (317)
Q Consensus 179 ~~gvD~l~~ET~p~~~Ea~a~~~~~~ 204 (317)
+..+|++.+=|-+..+ ...+..+++
T Consensus 70 ~~~vD~V~I~tP~~~H-~~~~~~al~ 94 (312)
T 3o9z_A 70 GEGVDYLSIASPNHLH-YPQIRMALR 94 (312)
T ss_dssp TCCCSEEEECSCGGGH-HHHHHHHHH
T ss_pred CCCCcEEEECCCchhh-HHHHHHHHH
Confidence 3456666655544332 344444444
No 369
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=37.00 E-value=1.5e+02 Score=28.56 Aligned_cols=64 Identities=13% Similarity=0.064 Sum_probs=45.1
Q ss_pred HHHHHHhCCCCEEEec-cCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCC
Q 021144 173 RVLILANSGADLIAFE-TIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCT 251 (317)
Q Consensus 173 qi~~l~~~gvD~l~~E-T~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~ 251 (317)
|+......|+|.+++= |+-+..+++..++.+++.+ +.+++-+ .+.+++-..+. .+++.||+|=.
T Consensus 122 Qi~ea~~~GAD~ILLi~a~l~~~~l~~l~~~a~~lg--m~~LvEv-----------h~~eE~~~A~~--lga~iIGinnr 186 (452)
T 1pii_A 122 QIYLARYYQADACLLMLSVLDDDQYRQLAAVAHSLE--MGVLTEV-----------SNEEEQERAIA--LGAKVVGINNR 186 (452)
T ss_dssp HHHHHHHTTCSEEEEETTTCCHHHHHHHHHHHHHTT--CEEEEEE-----------CSHHHHHHHHH--TTCSEEEEESE
T ss_pred HHHHHHHcCCCEEEEEcccCCHHHHHHHHHHHHHcC--CeEEEEe-----------CCHHHHHHHHH--CCCCEEEEeCC
Confidence 4555677999998654 6666778888898888876 6666554 13456655554 47889999973
No 370
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=36.97 E-value=90 Score=26.52 Aligned_cols=89 Identities=17% Similarity=0.099 Sum_probs=47.9
Q ss_pred HHHHHhCCCCEE--EeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhc-CCCceEEEE--
Q 021144 174 VLILANSGADLI--AFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADS-CEQVVAVGI-- 248 (317)
Q Consensus 174 i~~l~~~gvD~l--~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~-~~~~~aiGv-- 248 (317)
++.+.+.|+|.+ -.|..+.. +...++.+++.+ +++++++ .+ .++++. ++.+.. ..+++.|++
T Consensus 80 i~~~~~agad~v~vH~~~~~~~--~~~~~~~i~~~g--~~igv~~--~p------~t~~e~-~~~~~~~~~~~d~vl~~s 146 (228)
T 1h1y_A 80 VEPLAKAGASGFTFHIEVSRDN--WQELIQSIKAKG--MRPGVSL--RP------GTPVEE-VFPLVEAENPVELVLVMT 146 (228)
T ss_dssp HHHHHHHTCSEEEEEGGGCTTT--HHHHHHHHHHTT--CEEEEEE--CT------TSCGGG-GHHHHHSSSCCSEEEEES
T ss_pred HHHHHHcCCCEEEECCCCcccH--HHHHHHHHHHcC--CCEEEEE--eC------CCCHHH-HHHHHhcCCCCCEEEEEe
Confidence 555666899999 55654432 145566667655 7788666 22 223322 222222 003566666
Q ss_pred -cCC--C---hhhhHHHHHHHHhhC-CCcEEEEe
Q 021144 249 -NCT--S---PRFIHGLILSVRKVT-SKPVIIYP 275 (317)
Q Consensus 249 -NC~--~---p~~~~~~l~~l~~~~-~~pl~vyP 275 (317)
+-+ + +....+.++++++.. +.|+.+=.
T Consensus 147 v~pg~~g~~~~~~~l~~i~~~~~~~~~~pi~v~G 180 (228)
T 1h1y_A 147 VEPGFGGQKFMPEMMEKVRALRKKYPSLDIEVDG 180 (228)
T ss_dssp SCTTCSSCCCCGGGHHHHHHHHHHCTTSEEEEES
T ss_pred ecCCCCcccCCHHHHHHHHHHHHhcCCCCEEEEC
Confidence 332 1 234556677777776 67765443
No 371
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=36.82 E-value=2.7e+02 Score=26.07 Aligned_cols=31 Identities=23% Similarity=0.294 Sum_probs=25.8
Q ss_pred cccCCChHHHHHHHHHHHHhhcccccccccc
Q 021144 48 KCLVSSPHLVRKVHLDYLDAGANIIITASYQ 78 (317)
Q Consensus 48 ~~ll~~Pe~V~~iH~~Yl~AGAdiI~TnTy~ 78 (317)
.+-++++|...++-+.--++||++|.--+|.
T Consensus 149 pcsves~e~a~~~a~~~k~aGa~~vk~q~fk 179 (385)
T 3nvt_A 149 PCSVESYEQVAAVAESIKAKGLKLIRGGAFK 179 (385)
T ss_dssp CSBCCCHHHHHHHHHHHHHTTCCEEECBSSC
T ss_pred eCCcCCHHHHHHHHHHHHHcCCCeEEccccc
Confidence 3446789999999888899999999888775
No 372
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=36.75 E-value=1.7e+02 Score=27.22 Aligned_cols=98 Identities=12% Similarity=-0.028 Sum_probs=57.2
Q ss_pred HHHHHHhCCCCEEEec-cCCCH----------H----HHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHh
Q 021144 173 RVLILANSGADLIAFE-TIPNK----------L----EAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIA 237 (317)
Q Consensus 173 qi~~l~~~gvD~l~~E-T~p~~----------~----Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~ 237 (317)
.++++.++|+|.+-+= ..++. + .+..+++.+++.+ .. +.|++++.++. +=.-+.++++.+
T Consensus 92 a~~al~~ag~~~v~if~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g--~~--v~~~~ed~~r~-~~~~~~~~~~~~ 166 (370)
T 3rmj_A 92 AGEAVAPAPKKRIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYT--DD--VEFSCEDALRS-EIDFLAEICGAV 166 (370)
T ss_dssp HHHHHTTSSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTC--SC--EEEEEETGGGS-CHHHHHHHHHHH
T ss_pred HHHHHhhCCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcC--CE--EEEecCCCCcc-CHHHHHHHHHHH
Confidence 4566777899877432 23322 2 2333455555554 33 46777765543 112233444444
Q ss_pred hcCCCceEEEEcCC----ChhhhHHHHHHHHhhCC----CcEEEEeC
Q 021144 238 DSCEQVVAVGINCT----SPRFIHGLILSVRKVTS----KPVIIYPN 276 (317)
Q Consensus 238 ~~~~~~~aiGvNC~----~p~~~~~~l~~l~~~~~----~pl~vyPN 276 (317)
.+ .+++.|.+-=| .|..+..+++.+++... .||.+...
T Consensus 167 ~~-~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~~~~l~~H~H 212 (370)
T 3rmj_A 167 IE-AGATTINIPDTVGYSIPYKTEEFFRELIAKTPNGGKVVWSAHCH 212 (370)
T ss_dssp HH-HTCCEEEEECSSSCCCHHHHHHHHHHHHHHSTTGGGSEEEEECB
T ss_pred HH-cCCCEEEecCccCCcCHHHHHHHHHHHHHhCCCcCceEEEEEeC
Confidence 43 46676666544 38999999999988764 67877763
No 373
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=36.69 E-value=2e+02 Score=26.63 Aligned_cols=109 Identities=6% Similarity=-0.030 Sum_probs=0.0
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEEEeccCC-------------------------CHHHHHHHHHHHHHhCCCccEEEEE
Q 021144 162 SLETLKEFHRRRVLILANSGADLIAFETIP-------------------------NKLEAKAYAELLEEEGITIPAWFSF 216 (317)
Q Consensus 162 s~~el~~~h~~qi~~l~~~gvD~l~~ET~p-------------------------~~~Ea~a~~~~~~~~~~~~pv~iSf 216 (317)
..+++.+.|.+.++...++|.|.|=+=--- ..+=+..+++++++.-...||.+-+
T Consensus 155 eI~~ii~~f~~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~~v~vRl 234 (361)
T 3gka_A 155 EIPGVVAAFRRGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVHL 234 (361)
T ss_dssp GHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCCeEEEec
Q ss_pred EEcCCCcccCCCc----HHHHHHHhhcCCCceEEEEcCCChhhhHHHHHHHHhhCCCcEEE
Q 021144 217 NSKDGINVVSGDS----ILECASIADSCEQVVAVGINCTSPRFIHGLILSVRKVTSKPVII 273 (317)
Q Consensus 217 ~~~~~~~l~~G~~----l~~a~~~~~~~~~~~aiGvNC~~p~~~~~~l~~l~~~~~~pl~v 273 (317)
+..+...=.++.. ..+.++.+.+ .+++.|=+-+..... .+++.+++..+.|+++
T Consensus 235 s~~~~~~g~~~~~~~~~~~~la~~l~~-~Gvd~i~v~~~~~~~--~~~~~ik~~~~iPvi~ 292 (361)
T 3gka_A 235 APRGDAHTMGDSDPAATFGHVARELGR-RRIAFLFARESFGGD--AIGQQLKAAFGGPFIV 292 (361)
T ss_dssp CTTCCSSSCCCSCHHHHHHHHHHHHHH-TTCSEEEEECCCSTT--CCHHHHHHHHCSCEEE
T ss_pred ccccccCCCCCCCcHHHHHHHHHHHHH-cCCCEEEECCCCCCH--HHHHHHHHHcCCCEEE
No 374
>4f8x_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA; 1.47A {Penicillium canescens}
Probab=36.66 E-value=91 Score=28.71 Aligned_cols=47 Identities=15% Similarity=0.093 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHhCCC--CEEEecc------CCCHHHHHHHHHHHHHhCCCccEEEEE
Q 021144 168 EFHRRRVLILANSGA--DLIAFET------IPNKLEAKAYAELLEEEGITIPAWFSF 216 (317)
Q Consensus 168 ~~h~~qi~~l~~~gv--D~l~~ET------~p~~~Ea~a~~~~~~~~~~~~pv~iSf 216 (317)
+.+...++.|.+.|| |.|-+.. .|+..+++..++.+...+ +||+||=
T Consensus 191 ~~~~~lv~~l~~~gvpidgiG~Q~H~~~~~~p~~~~~~~~l~~~a~lG--l~v~iTE 245 (335)
T 4f8x_A 191 TAVLQLVSNLRKRGIRIDGVGLESHFIVGETPSLADQLATKQAYIKAN--LDVAVTE 245 (335)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEEETTCCCCHHHHHHHHHHHHHTT--CEEEEEE
T ss_pred HHHHHHHHHHHHCCCCcceeeeeeeecCCCCCCHHHHHHHHHHHHHcC--CeeEEee
Confidence 456667888888775 8886653 578889999999888876 9999874
No 375
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=36.58 E-value=1.7e+02 Score=24.13 Aligned_cols=83 Identities=13% Similarity=-0.003 Sum_probs=47.0
Q ss_pred HHHHHHhCCCCEEEeccCCC-HHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCC
Q 021144 173 RVLILANSGADLIAFETIPN-KLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCT 251 (317)
Q Consensus 173 qi~~l~~~gvD~l~~ET~p~-~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~ 251 (317)
.++.+. .|+|+|-+-+ |. +.....+++.+++..+++|+.+.+-+.+.. ...++.+.. .++++|-+-+.
T Consensus 18 ~~~~~~-~~~diie~G~-p~~~~~g~~~i~~ir~~~~~~~i~~~~~~~~~~--------~~~~~~~~~-~Gad~v~v~~~ 86 (211)
T 3f4w_A 18 FMDKVV-DDVDIIEVGT-PFLIREGVNAIKAIKEKYPHKEVLADAKIMDGG--------HFESQLLFD-AGADYVTVLGV 86 (211)
T ss_dssp HHHHHG-GGCSEEEECH-HHHHHHTTHHHHHHHHHCTTSEEEEEEEECSCH--------HHHHHHHHH-TTCSEEEEETT
T ss_pred HHHHhh-cCccEEEeCc-HHHHhccHHHHHHHHHhCCCCEEEEEEEeccch--------HHHHHHHHh-cCCCEEEEeCC
Confidence 445554 5899985444 65 666667777788764468998776554321 112333332 35666666554
Q ss_pred Ch-hhhHHHHHHHHhh
Q 021144 252 SP-RFIHGLILSVRKV 266 (317)
Q Consensus 252 ~p-~~~~~~l~~l~~~ 266 (317)
.+ +.+..+++.+++.
T Consensus 87 ~~~~~~~~~~~~~~~~ 102 (211)
T 3f4w_A 87 TDVLTIQSCIRAAKEA 102 (211)
T ss_dssp SCHHHHHHHHHHHHHH
T ss_pred CChhHHHHHHHHHHHc
Confidence 33 4445555555543
No 376
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=36.48 E-value=1e+02 Score=27.39 Aligned_cols=119 Identities=13% Similarity=0.028 Sum_probs=75.5
Q ss_pred CCCCEEEec----cCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCCC---
Q 021144 180 SGADLIAFE----TIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTS--- 252 (317)
Q Consensus 180 ~gvD~l~~E----T~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~~--- 252 (317)
.-+|++=|- ++..-+.++..++.+++.+ ++++.--|+-+. -+..| .+.+.++.+++ .+.++|=|+-..
T Consensus 37 ~yID~lKfg~Gt~~l~~~~~l~eki~l~~~~g--V~v~~GGTl~E~-~~~qg-~~~~yl~~~k~-lGf~~iEiS~G~i~l 111 (251)
T 1qwg_A 37 DYIDFVKFGWGTSAVIDRDVVKEKINYYKDWG--IKVYPGGTLFEY-AYSKG-KFDEFLNECEK-LGFEAVEISDGSSDI 111 (251)
T ss_dssp GGCSEEEECTTGGGGSCHHHHHHHHHHHHTTT--CEEEECHHHHHH-HHHTT-CHHHHHHHHHH-HTCCEEEECCSSSCC
T ss_pred hhcceEEecCceeeecCHHHHHHHHHHHHHcC--CeEECCcHHHHH-HHHcC-cHHHHHHHHHH-cCCCEEEECCCcccC
Confidence 469999776 3344455888888888876 555421111000 12233 66677777765 588888888852
Q ss_pred -hhhhHHHHHHHHhhCCCcEEEEeCCCCccccccccccccCCCChhhHHHHHHHHHHcccc
Q 021144 253 -PRFIHGLILSVRKVTSKPVIIYPNSGETYNAELKKWVVSFSLHFFPLELILNPFASCRLI 312 (317)
Q Consensus 253 -p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~w~~~~~~~~~~~~~~~~~w~~~~~~ 312 (317)
.+.-..+++.+++. -+.|.+.-|.. |+. .....+|+.|.+.+++++++|.=
T Consensus 112 ~~~~~~~~I~~~~~~---G~~v~~EvG~k-~~~-----~~~~~~~~~~I~~~~~~LeAGA~ 163 (251)
T 1qwg_A 112 SLEERNNAIKRAKDN---GFMVLTEVGKK-MPD-----KDKQLTIDDRIKLINFDLDAGAD 163 (251)
T ss_dssp CHHHHHHHHHHHHHT---TCEEEEEECCS-SHH-----HHTTCCHHHHHHHHHHHHHHTCS
T ss_pred CHHHHHHHHHHHHHC---CCEEeeecccc-CCc-----ccCCCCHHHHHHHHHHHHHCCCc
Confidence 35556677666553 35667777742 221 12347899999999999999964
No 377
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=36.19 E-value=2.1e+02 Score=27.29 Aligned_cols=22 Identities=18% Similarity=0.140 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHHhCCCCEEEec
Q 021144 166 LKEFHRRRVLILANSGADLIAFE 188 (317)
Q Consensus 166 l~~~h~~qi~~l~~~gvD~l~~E 188 (317)
..+.|...++.+.+ ++|+|-+.
T Consensus 195 ~~~dy~~~a~~l~~-~aD~ieiN 216 (443)
T 1tv5_A 195 IVDDLKYCINKIGR-YADYIAIN 216 (443)
T ss_dssp HHHHHHHHHHHHGG-GCSEEEEE
T ss_pred HHHHHHHHHHHHhc-CCCEEEEe
Confidence 45566777777765 79999775
No 378
>3cpg_A Uncharacterized protein; unknown protein, TIM barrel, monomer, structural genomics, PSI-2, protein structure initiative; 1.71A {Bifidobacterium adolescentis ATCC15703}
Probab=36.17 E-value=73 Score=28.17 Aligned_cols=67 Identities=16% Similarity=0.145 Sum_probs=44.3
Q ss_pred CCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHH---HHHHHhhcCCCceEEEEcCC
Q 021144 182 ADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSIL---ECASIADSCEQVVAVGINCT 251 (317)
Q Consensus 182 vD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~---~a~~~~~~~~~~~aiGvNC~ 251 (317)
.|+ ..|+.++++++.+-+.+++.+...+|++-+....+ .-+.|.+.+ ++++.+...+++...|+-|-
T Consensus 135 ~~l--~~~Vds~~~l~~L~~~a~~~~~~~~V~lkVdtGme-~~R~G~~~ee~~~l~~~i~~~~~l~l~Gl~th 204 (282)
T 3cpg_A 135 VDT--IESVDSIDLAEKISRRAVARGITVGVLLEVNESGE-ESKSGCDPAHAIRIAQKIGTLDGIELQGLMTI 204 (282)
T ss_dssp CSE--EEEECCHHHHHHHHHHHHHHTCCEEEEEEBCCSSC-TTSSSBCGGGHHHHHHHHHTCTTEEEEEEECC
T ss_pred CCE--EEEeCCHHHHHHHHHHHHhcCCCceEEEEEECCCC-CCCCCcCHHHHHHHHHHHHhCCCceEEeEEEE
Confidence 555 46888999999988877776645677776643211 144565544 44555555567888999984
No 379
>2vvt_A Glutamate racemase; isomerase, peptidoglycan synthesis, cell WALL biogenesis/degradation, cell shape, benzyl purine, MURI inhibitor; HET: I24 DGL; 1.65A {Enterococcus faecalis} PDB: 2jfp_A* 2jfo_A* 2jfu_A 2jfv_A* 2jfw_A*
Probab=36.09 E-value=1.4e+02 Score=26.46 Aligned_cols=31 Identities=10% Similarity=0.103 Sum_probs=26.3
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEeccCC
Q 021144 161 VSLETLKEFHRRRVLILANSGADLIAFETIP 191 (317)
Q Consensus 161 ~s~~el~~~h~~qi~~l~~~gvD~l~~ET~p 191 (317)
.+.+++.++..+.++.|.+.|+|+|++=..+
T Consensus 66 ~s~~~i~~~~~~~~~~L~~~g~d~IVIACNT 96 (290)
T 2vvt_A 66 RPAEQVVQFTWEMADFLLKKRIKMLVIACNT 96 (290)
T ss_dssp SCHHHHHHHHHHHHHHHHTTTCSEEEECCHH
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCcc
Confidence 5789999999999999999999999876443
No 380
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=36.06 E-value=1.1e+02 Score=28.08 Aligned_cols=58 Identities=19% Similarity=0.234 Sum_probs=33.1
Q ss_pred CccEEEEEEEcCCCcccCCCcHHHHHH---Hhhc--CCCceEEEEcCCCh------------hhhHHHHHHHHhhCCCcE
Q 021144 209 TIPAWFSFNSKDGINVVSGDSILECAS---IADS--CEQVVAVGINCTSP------------RFIHGLILSVRKVTSKPV 271 (317)
Q Consensus 209 ~~pv~iSf~~~~~~~l~~G~~l~~a~~---~~~~--~~~~~aiGvNC~~p------------~~~~~~l~~l~~~~~~pl 271 (317)
++|+++++. |.++++.++ .+.. ...+++|=+|+++| +.+..+++.+++..++|+
T Consensus 126 ~~pvivsi~---------g~~~~~~~~~~~~~~~~~~~~ad~ielNiScPn~~g~~~l~~~~~~~~~i~~~v~~~~~~pv 196 (354)
T 3tjx_A 126 KKPLFLSMS---------GLSMRENVEMCKRLAAVATEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEVYPHSF 196 (354)
T ss_dssp TCCEEEEEC---------CSSHHHHHHHHHHHHHHHHHHCCEEEEECC---------CTTSHHHHHHHHHHHHHHCCSCE
T ss_pred CceEEEEEe---------cCChHHHHHHHHHHHHhhhcCCCEEEeeeCCCCCcchhhhccCHHHHHHHHHHHHHHhhccc
Confidence 589999983 444443222 2211 12456788888765 234556667777778887
Q ss_pred EEEe
Q 021144 272 IIYP 275 (317)
Q Consensus 272 ~vyP 275 (317)
.+.-
T Consensus 197 ~vK~ 200 (354)
T 3tjx_A 197 GVKM 200 (354)
T ss_dssp EEEE
T ss_pred cccc
Confidence 6653
No 381
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=36.01 E-value=78 Score=28.85 Aligned_cols=99 Identities=11% Similarity=0.125 Sum_probs=0.0
Q ss_pred HHHHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCC------cccCCCcHHHHHHHhhcCCCce
Q 021144 171 RRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGI------NVVSGDSILECASIADSCEQVV 244 (317)
Q Consensus 171 ~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~------~l~~G~~l~~a~~~~~~~~~~~ 244 (317)
...++.+.+.|+|++-+=......-++++++++++.+ ..|-++.+++-... .+.++...+.++..........
T Consensus 93 ~~av~~~a~lGaD~vTVHa~~G~~~m~aa~e~a~~~~-~~~~llaVtvLTS~s~~~l~~l~~~~~~e~V~~lA~~a~~~G 171 (303)
T 3ru6_A 93 ADACEEVSKLGVDMINIHASAGKIAIQEVMTRLSKFS-KRPLVLAVSALTSFDEENFFSIYRQKIEEAVINFSKISYENG 171 (303)
T ss_dssp HHHHHHHHTTTCSEEEEEGGGCHHHHHHHHHHHTTSS-SCCEEEEECSCTTCCHHHHHHHHSSCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCCEEEEeccCCHHHHHHHHHHHHhcC-CCceEEEEEEecCCCHHHHHHHHcCCHHHHHHHHHHHHHHcC
Q ss_pred EEEEcCCChhhhHHHHHHHHhhCCC-cEEEEe
Q 021144 245 AVGINCTSPRFIHGLILSVRKVTSK-PVIIYP 275 (317)
Q Consensus 245 aiGvNC~~p~~~~~~l~~l~~~~~~-pl~vyP 275 (317)
.-|+=|+.-+ ++.+++.... +++|-|
T Consensus 172 ~dGvV~s~~E-----~~~IR~~~~~~fl~VTP 198 (303)
T 3ru6_A 172 LDGMVCSVFE-----SKKIKEHTSSNFLTLTP 198 (303)
T ss_dssp CSEEECCTTT-----HHHHHHHSCTTSEEEEC
T ss_pred CCEEEECHHH-----HHHHHHhCCCccEEECC
No 382
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=35.76 E-value=44 Score=30.31 Aligned_cols=45 Identities=20% Similarity=0.306 Sum_probs=32.9
Q ss_pred HHHHHHHHHHhCCCCEEEec--cCCCHHHHHHHHHHHHHhCCCccEEEEE
Q 021144 169 FHRRRVLILANSGADLIAFE--TIPNKLEAKAYAELLEEEGITIPAWFSF 216 (317)
Q Consensus 169 ~h~~qi~~l~~~gvD~l~~E--T~p~~~Ea~a~~~~~~~~~~~~pv~iSf 216 (317)
.|.+++...+++|.++|+ | --.++.|++.+++++++.+ +++.+.+
T Consensus 106 ~H~~~a~~al~aGkhVl~-EKPla~~~~ea~~l~~~a~~~g--~~l~vg~ 152 (393)
T 4fb5_A 106 FHAEMAIAALEAGKHVWC-EKPMAPAYADAERMLATAERSG--KVAALGY 152 (393)
T ss_dssp GHHHHHHHHHHTTCEEEE-CSCSCSSHHHHHHHHHHHHHSS--SCEEECC
T ss_pred HHHHHHHHHHhcCCeEEE-ccCCcccHHHHHHhhhhHHhcC--Ccccccc
Confidence 578888888888887664 7 2457889998888888754 5555544
No 383
>3a9s_A D-arabinose isomerase; rossmann fold, beta barrel, carbohydrate metabolism, cytoplasm, fucose metabolism, manganese, metal- binding; 1.60A {Geobacillus pallidus} PDB: 3a9r_A 3a9t_A*
Probab=35.40 E-value=3.5e+02 Score=26.98 Aligned_cols=84 Identities=19% Similarity=0.203 Sum_probs=50.1
Q ss_pred CCCEEEec-cCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCC-Ch--hhh
Q 021144 181 GADLIAFE-TIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCT-SP--RFI 256 (317)
Q Consensus 181 gvD~l~~E-T~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~-~p--~~~ 256 (317)
+|+++..+ ++.+.+|+.++.+.+++.+.+..+.+.-++.....+.+. .....+...|+|=+ -| -.+
T Consensus 57 ~vevV~~~~~I~~~~eA~~~ae~F~~~~vd~ii~~~~~w~yg~et~~~----------~~~~Pvllw~~~~~e~pG~~gl 126 (595)
T 3a9s_A 57 PVECVIADTCIGGVKEAAEAAEKFAREGVGVSITVTPCWCYGTETMDM----------DPHIPKAVWGFNGTERPGAVYL 126 (595)
T ss_dssp BCCEEECSSCBCSHHHHHHHHHHHHHHTEEEEEEEESSCCCGGGTCCC----------CTTSCEEEEECCCSSSCHHHHH
T ss_pred CeEEEECCCeeCCHHHHHHHHHHHHHcCCCEEEEEeccCCCHHHHHhh----------cCCCCEEEEeCCCCCCcchhHH
Confidence 68999999 999999999999999987644444433333333222222 11234556777753 23 234
Q ss_pred HHHHHHHHhhCCCc-EEEEe
Q 021144 257 HGLILSVRKVTSKP-VIIYP 275 (317)
Q Consensus 257 ~~~l~~l~~~~~~p-l~vyP 275 (317)
..++..+++. .+| ..+|-
T Consensus 127 ~a~~~~l~q~-Gip~~~I~G 145 (595)
T 3a9s_A 127 AAVLAGYNQK-GLPAFGIYG 145 (595)
T ss_dssp HHHHHHHHHH-TCCCEEEEC
T ss_pred HHHHHHHHHc-CCceEEEec
Confidence 4455555554 455 55554
No 384
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=35.38 E-value=2.5e+02 Score=25.38 Aligned_cols=92 Identities=9% Similarity=-0.032 Sum_probs=57.5
Q ss_pred HHHHHHhCCCCEEEeccCC--------------CHHHHHHHHHH----HHHhCCCccEEEEEEEcCCCcccCCCcHHHHH
Q 021144 173 RVLILANSGADLIAFETIP--------------NKLEAKAYAEL----LEEEGITIPAWFSFNSKDGINVVSGDSILECA 234 (317)
Q Consensus 173 qi~~l~~~gvD~l~~ET~p--------------~~~Ea~a~~~~----~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~ 234 (317)
-++.|.++|++.+-+|-.. +.+|+..=+++ .++.+ .+++|--..+ ... +..+.+++
T Consensus 100 tv~~l~~aGaagv~iEDq~~~Krcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~--~d~~I~ARTD--a~~--~~gldeAi 173 (302)
T 3fa4_A 100 TTEQYSRSGVAAFHIEDQVQTKRCGHLAGKILVDTDTYVTRIRAAVQARQRIG--SDIVVIARTD--SLQ--THGYEESV 173 (302)
T ss_dssp HHHHHHHTTCCEEEECSBCCC-------CCCBCCHHHHHHHHHHHHHHHHHHT--CCCEEEEEEC--CHH--HHCHHHHH
T ss_pred HHHHHHHcCCcEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcC--CCEEEEEEec--ccc--cCCHHHHH
Confidence 4777888999999999653 45565443333 33333 4566555443 232 23488888
Q ss_pred HHhhc--CCCceEEEEcCC-ChhhhHHHHHHHHhhCCCcEEE
Q 021144 235 SIADS--CEQVVAVGINCT-SPRFIHGLILSVRKVTSKPVII 273 (317)
Q Consensus 235 ~~~~~--~~~~~aiGvNC~-~p~~~~~~l~~l~~~~~~pl~v 273 (317)
+.+.. ..+.++|=+-+. +++.+..+.+.+. ..|+.+
T Consensus 174 ~Ra~ay~eAGAD~ifi~g~~~~~ei~~~~~~~~---~~Pl~~ 212 (302)
T 3fa4_A 174 ARLRAARDAGADVGFLEGITSREMARQVIQDLA---GWPLLL 212 (302)
T ss_dssp HHHHHHHTTTCSEEEETTCCCHHHHHHHHHHTT---TSCEEE
T ss_pred HHHHHHHHcCCCEEeecCCCCHHHHHHHHHHhc---CCceeE
Confidence 77642 358899999885 5777776666553 356644
No 385
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=35.18 E-value=4.6e+02 Score=28.26 Aligned_cols=64 Identities=19% Similarity=0.276 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHhCCCCEEEec-cC--CCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhh
Q 021144 168 EFHRRRVLILANSGADLIAFE-TI--PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIAD 238 (317)
Q Consensus 168 ~~h~~qi~~l~~~gvD~l~~E-T~--p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~ 238 (317)
+++.+.++.+.+.|+|.|.+= |. -...++..+++.+++.. ++| +++-+.++ .|..+..+...+.
T Consensus 692 ~~~~~~a~~~~~~Ga~~i~l~Dt~G~~~P~~~~~lv~~l~~~~-~~~--i~~H~Hnt----~G~a~An~laA~~ 758 (1150)
T 3hbl_A 692 EYYVKLAKELEREGFHILAIKDMAGLLKPKAAYELIGELKSAV-DLP--IHLHTHDT----SGNGLLTYKQAID 758 (1150)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHC-CSC--EEEEECBT----TSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCeeeEcCccCCCCHHHHHHHHHHHHHhc-CCe--EEEEeCCC----CcHHHHHHHHHHH
Confidence 567778888999999999774 43 36788888999888763 455 45555543 4666666666654
No 386
>1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A
Probab=34.91 E-value=40 Score=30.70 Aligned_cols=75 Identities=11% Similarity=0.144 Sum_probs=45.4
Q ss_pred HHHHHHHHHHhCC--CCEEEecc-----CCCHHHHHHHHHHHHHhCCCccEEEE-EEEcCCCcccCCCcHHHHHHHhhcC
Q 021144 169 FHRRRVLILANSG--ADLIAFET-----IPNKLEAKAYAELLEEEGITIPAWFS-FNSKDGINVVSGDSILECASIADSC 240 (317)
Q Consensus 169 ~h~~qi~~l~~~g--vD~l~~ET-----~p~~~Ea~a~~~~~~~~~~~~pv~iS-f~~~~~~~l~~G~~l~~a~~~~~~~ 240 (317)
.+..+++.|.+.| +|.|-+.. .|+..+++..++.+.+.+ +||||| +.+... ....+++++..+...
T Consensus 184 ~~~~~v~~l~~~G~~iDgIG~Q~H~~~~~~~~~~~~~~l~~~a~~G--~pv~iTEldi~~~----qa~~y~~~~~~~~~~ 257 (313)
T 1v0l_A 184 AMYNMVRDFKQRGVPIDCVGFQSHFNSGSPYNSNFRTTLQNFAALG--VDVAITELDIQGA----PASTYANVTNDCLAV 257 (313)
T ss_dssp HHHHHHHHHHHHTCCCCEEEECCEEBTTBCCCTTHHHHHHHHHTTT--CEEEEEEEEETTC----CHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHCCCCcceEEEeEEccCCCCCHHHHHHHHHHHHhcC--CeEEEEeCCccHH----HHHHHHHHHHHHHhc
Confidence 3446777777767 59997753 345677888888777765 899998 555411 223345555555432
Q ss_pred CCceEEEEcCC
Q 021144 241 EQVVAVGINCT 251 (317)
Q Consensus 241 ~~~~aiGvNC~ 251 (317)
+..+||.--
T Consensus 258 --~~v~git~W 266 (313)
T 1v0l_A 258 --SRCLGITVW 266 (313)
T ss_dssp --TTEEEEEES
T ss_pred --CCceEEEEE
Confidence 234455443
No 387
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=34.85 E-value=1.5e+02 Score=26.72 Aligned_cols=72 Identities=14% Similarity=0.027 Sum_probs=44.6
Q ss_pred HHHHHHHhCCCCEEE--eccCC-----------CHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhh
Q 021144 172 RRVLILANSGADLIA--FETIP-----------NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIAD 238 (317)
Q Consensus 172 ~qi~~l~~~gvD~l~--~ET~p-----------~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~ 238 (317)
+.++.|.++|+|.+. +||.. +.++...+++.+++.+ .++...|-+ | .|++.++.++.+.
T Consensus 153 e~l~~L~~aG~~~i~i~lEt~~~~~~~~i~~~~~~~~~l~~i~~a~~~G--i~v~~~~i~---G---lget~e~~~~~l~ 224 (350)
T 3t7v_A 153 ATLLKAREKGANFLALYQETYDTELYRKLRVGQSFDGRVNARRFAKQQG--YCVEDGILT---G---VGNDIESTILSLR 224 (350)
T ss_dssp HHHHHHHHTTEEEEECCCBCSCHHHHHHHSTTCCHHHHHHHHHHHHHHT--CEEEEEEEE---S---SSCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEeeecCCHHHHHHhCCCCCHHHHHHHHHHHHHcC--CeEccceEe---e---cCCCHHHHHHHHH
Confidence 346667778888764 67762 4566666777777776 566655544 1 2677776665543
Q ss_pred c--CCCceEEEEcCC
Q 021144 239 S--CEQVVAVGINCT 251 (317)
Q Consensus 239 ~--~~~~~aiGvNC~ 251 (317)
. ..++..++++.-
T Consensus 225 ~l~~l~~~~v~~~~f 239 (350)
T 3t7v_A 225 GMSTNDPDMVRVMTF 239 (350)
T ss_dssp HHHHTCCSEEEEEEC
T ss_pred HHHhCCCCEEEecce
Confidence 1 246677777764
No 388
>2wx4_A DCP1, decapping protein 1; asymmetric assembly, trimerization module, mRNA decapping, P-BODY component, structural protein; 2.80A {Drosophila melanogaster}
Probab=34.77 E-value=14 Score=24.16 Aligned_cols=17 Identities=24% Similarity=0.495 Sum_probs=14.3
Q ss_pred CCChHHHHHHHHHHHHh
Q 021144 51 VSSPHLVRKVHLDYLDA 67 (317)
Q Consensus 51 l~~Pe~V~~iH~~Yl~A 67 (317)
-++++.|.++|+.|+..
T Consensus 23 knD~~Fl~~iHeAYl~s 39 (46)
T 2wx4_A 23 QNDKEFANKLHKAYLNG 39 (46)
T ss_dssp HHCTTHHHHHHHHHHC-
T ss_pred HcCHHHHHHHHHHHHHH
Confidence 46889999999999975
No 389
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=34.46 E-value=87 Score=28.60 Aligned_cols=97 Identities=12% Similarity=-0.108 Sum_probs=59.3
Q ss_pred HHHHHHhCCCCEEEec-cCCCH--------------HHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHh
Q 021144 173 RVLILANSGADLIAFE-TIPNK--------------LEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIA 237 (317)
Q Consensus 173 qi~~l~~~gvD~l~~E-T~p~~--------------~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~ 237 (317)
.++.+..+|+|.|.+- ..++. +.++.+++.+++.+ .. +.|.|.+.++. +=+-+.++++.+
T Consensus 86 a~~al~~ag~~~v~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g--~~--v~f~~~d~~~~-~~~~~~~~~~~~ 160 (325)
T 3eeg_A 86 AGEALRFAKRSRIHTGIGSSDIHIEHKLRSTRENILEMAVAAVKQAKKVV--HE--VEFFCEDAGRA-DQAFLARMVEAV 160 (325)
T ss_dssp HHHHHTTCSSEEEEEEEECSHHHHC----CCCTTGGGTTHHHHHHHHTTS--SE--EEEEEETGGGS-CHHHHHHHHHHH
T ss_pred HHHhhcccCCCEEEEEecccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCC--CE--EEEEccccccc-hHHHHHHHHHHH
Confidence 4566777799987542 22222 23456677777765 43 46777766543 112233444444
Q ss_pred hcCCCceEEEEcCC----ChhhhHHHHHHHHhhCC----CcEEEEe
Q 021144 238 DSCEQVVAVGINCT----SPRFIHGLILSVRKVTS----KPVIIYP 275 (317)
Q Consensus 238 ~~~~~~~aiGvNC~----~p~~~~~~l~~l~~~~~----~pl~vyP 275 (317)
.+ .+++.|.+.=+ .|..+..+++.+++... .||.+..
T Consensus 161 ~~-~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~~~~i~~H~ 205 (325)
T 3eeg_A 161 IE-AGADVVNIPDTTGYMLPWQYGERIKYLMDNVSNIDKAILSAHC 205 (325)
T ss_dssp HH-HTCSEEECCBSSSCCCHHHHHHHHHHHHHHCSCGGGSEEEECB
T ss_pred Hh-cCCCEEEecCccCCcCHHHHHHHHHHHHHhCCCCCceEEEEEe
Confidence 43 46776666543 48999999999988765 6777666
No 390
>1dqu_A Isocitrate lyase; beta barrel; 2.80A {Emericella nidulans} SCOP: c.1.12.7
Probab=34.41 E-value=51 Score=32.64 Aligned_cols=45 Identities=27% Similarity=0.266 Sum_probs=33.5
Q ss_pred HHHHHHhCCCCEEEeccC-CCHHHHHHHHHHHHHhCCCccEEEEEEEcC
Q 021144 173 RVLILANSGADLIAFETI-PNKLEAKAYAELLEEEGITIPAWFSFNSKD 220 (317)
Q Consensus 173 qi~~l~~~gvD~l~~ET~-p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~ 220 (317)
|..++. ..+|+|+.||= |++.+++...+.+++..+++ |+.+.|.+
T Consensus 381 r~~a~a-p~aDliW~Et~~P~~~~a~~fa~~i~~~~P~~--~LaYN~SP 426 (538)
T 1dqu_A 381 RAVAYA-PFADLIWMESKLPDYKQAKEFADGVHAVWPEQ--KLAYNLSP 426 (538)
T ss_dssp HHHHHT-TSCSEEECCCSSCCHHHHHHHHHHHHHHCTTC--EEEEECCS
T ss_pred HhcccC-cccceEEeccCCCCHHHHHHHHHHHHHhCCCc--eEEecCCc
Confidence 333443 68999999997 99999999999999876553 44454443
No 391
>3l52_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, PSI-2, protein structure initiative; 1.35A {Streptomyces avermitilis} PDB: 3v75_A*
Probab=34.38 E-value=69 Score=28.92 Aligned_cols=109 Identities=13% Similarity=0.046 Sum_probs=69.2
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEE-----EeccCC--CHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHH
Q 021144 162 SLETLKEFHRRRVLILANSGADLI-----AFETIP--NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECA 234 (317)
Q Consensus 162 s~~el~~~h~~qi~~l~~~gvD~l-----~~ET~p--~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~ 234 (317)
+.+.+.++-+..++.+.+ -|.++ +||..- -+..++.+++.+++.+ .+|+.-+-+.|= |.+...++
T Consensus 44 ~~~~~~~~~~~ivd~l~~-~v~~~Kvg~~lf~~~G~~G~~~l~~~i~~l~~~g--~~VflDlK~~DI-----pnTv~~ya 115 (284)
T 3l52_A 44 DVAGLERFSRTVVEALGE-HVAVFKPQSAFFERFGSRGVAVLEKTVAEARAAG--ALVVMDAKRGDI-----GSTMAAYA 115 (284)
T ss_dssp SHHHHHHHHHHHHHHHTT-TCSEEEEBHHHHHTTHHHHHHHHHHHHHHHHHTT--CEEEEEEEECCC-----HHHHHHHH
T ss_pred chHHHHHHHHHHHHHhCC-cceEEEeeHHHHHhcCHHHHHHHHHHHHHHHHCC--CcEEEEecccCc-----HHHHHHHH
Confidence 567788888888887764 35444 344332 2334555777777754 899988887663 44466666
Q ss_pred HHhhc---CCCceEEEEcCC-ChhhhHHHHHHHHhhCCCc--EEEEeCCC
Q 021144 235 SIADS---CEQVVAVGINCT-SPRFIHGLILSVRKVTSKP--VIIYPNSG 278 (317)
Q Consensus 235 ~~~~~---~~~~~aiGvNC~-~p~~~~~~l~~l~~~~~~p--l~vyPNaG 278 (317)
+.+.. ..+++++-+++. +++.|.++++...+..+.- |.-.-|.|
T Consensus 116 ~~~~~~~~~lg~D~vTvh~~~G~~~l~~~~~~a~~~~kgvfvL~~tSnpg 165 (284)
T 3l52_A 116 EAFLRKDSPLFSDALTVSPYLGYGSLRPAVELARESGAGLFVLALTSNPE 165 (284)
T ss_dssp HHHSSTTSTTCCSEEEECCTTCGGGGHHHHHHHHHHTCEEEEEEECCSTT
T ss_pred HHHhccccccCCcEEEEeccCCHHHHHHHHHHHHhcCCeEEEEEeCCCCC
Confidence 55432 257899999997 6778888887765543222 33455555
No 392
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=34.30 E-value=2.5e+02 Score=25.32 Aligned_cols=110 Identities=13% Similarity=0.106 Sum_probs=60.6
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEeccCCCH--HHHHHHHHHHHHhCCCccEEEEEEEcCC-CcccCCCcHHHHHHHh
Q 021144 161 VSLETLKEFHRRRVLILANSGADLIAFETIPNK--LEAKAYAELLEEEGITIPAWFSFNSKDG-INVVSGDSILECASIA 237 (317)
Q Consensus 161 ~s~~el~~~h~~qi~~l~~~gvD~l~~ET~p~~--~Ea~a~~~~~~~~~~~~pv~iSf~~~~~-~~l~~G~~l~~a~~~~ 237 (317)
++.+|+...-. .++.+.+.|+|.|.|--+..- -......++++..+ .+++ ||... ..+ .+..++++.+
T Consensus 105 Ys~~E~~~M~~-dI~~~~~~GAdGvVfG~L~~dg~iD~~~~~~Li~~a~-~l~v----TFHRAFD~~---~d~~~Ale~L 175 (287)
T 3iwp_A 105 YSDREIEVMKA-DIRLAKLYGADGLVFGALTEDGHIDKELCMSLMAICR-PLPV----TFHRAFDMV---HDPMAALETL 175 (287)
T ss_dssp CCHHHHHHHHH-HHHHHHHTTCSEEEECCBCTTSCBCHHHHHHHHHHHT-TSCE----EECGGGGGC---SCHHHHHHHH
T ss_pred cCHHHHHHHHH-HHHHHHHcCCCEEEEeeeCCCCCcCHHHHHHHHHHcC-CCcE----EEECchhcc---CCHHHHHHHH
Confidence 46677766554 588899999999999854321 12234444455443 2443 33221 111 1245666666
Q ss_pred hcCCCceEEEEcCCCh--hhhHHHHHHHHhhCCCcEEEEeCCCCc
Q 021144 238 DSCEQVVAVGINCTSP--RFIHGLILSVRKVTSKPVIIYPNSGET 280 (317)
Q Consensus 238 ~~~~~~~aiGvNC~~p--~~~~~~l~~l~~~~~~pl~vyPNaG~~ 280 (317)
... +++-|...=..| ..=.+.|+++.+..+..+.+.|-+|-.
T Consensus 176 i~l-GvdrILTSG~~~~a~~Gl~~Lk~Lv~~a~~rI~ImaGGGV~ 219 (287)
T 3iwp_A 176 LTL-GFERVLTSGCDSSALEGLPLIKRLIEQAKGRIVVMPGGGIT 219 (287)
T ss_dssp HHH-TCSEEEECTTSSSTTTTHHHHHHHHHHHTTSSEEEECTTCC
T ss_pred HHc-CCCEEECCCCCCChHHhHHHHHHHHHHhCCCCEEEECCCcC
Confidence 542 666666644322 222345555555445567788888854
No 393
>3u7b_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA MAN; 1.94A {Fusarium oxysporum}
Probab=34.24 E-value=95 Score=28.42 Aligned_cols=47 Identities=17% Similarity=0.249 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHhCCC--CEEEec-------------cCCCHHHHHHHHHHHHHhCCCccEEEEE
Q 021144 168 EFHRRRVLILANSGA--DLIAFE-------------TIPNKLEAKAYAELLEEEGITIPAWFSF 216 (317)
Q Consensus 168 ~~h~~qi~~l~~~gv--D~l~~E-------------T~p~~~Ea~a~~~~~~~~~~~~pv~iSf 216 (317)
+.+...++.|.+.|| |.|-+. ..|++.+++..++.+...+ +||+||=
T Consensus 184 ~~~~~~v~~l~~~GvpidgiG~Q~H~~~~~~~~~~~~~p~~~~~~~~l~~~a~lG--l~v~iTE 245 (327)
T 3u7b_A 184 EGAKRIARLVKSYGLRIDGIGLQAHMTSESTPTQNTPTPSRAKLASVLQGLADLG--VDVAYTE 245 (327)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEEESSCCSSCCSCCCCHHHHHHHHHHHHTTT--CEEEEEE
T ss_pred HHHHHHHHHHHHCCCCcceEEEcccccccccccccCCCCCHHHHHHHHHHHHhcC--CceEEEe
Confidence 355667888888774 887443 3588899999999988766 9999874
No 394
>2eq5_A 228AA long hypothetical hydantoin racemase; structural genomics, NPPSFA, national project on P structural and functional analyses; 2.20A {Pyrococcus horikoshii}
Probab=34.18 E-value=1.5e+02 Score=24.77 Aligned_cols=75 Identities=24% Similarity=0.222 Sum_probs=37.7
Q ss_pred CHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCC--------cHHHHHHHhhcCCCceEEEEcCCChhhhHHHHHHH
Q 021144 192 NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGD--------SILECASIADSCEQVVAVGINCTSPRFIHGLILSV 263 (317)
Q Consensus 192 ~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~--------~l~~a~~~~~~~~~~~aiGvNC~~p~~~~~~l~~l 263 (317)
...|.......+++..++..+. +..+....+...+. .+.++++.+.. .++++|.+.|... ..++.+
T Consensus 19 ~~~e~~~~~~~~~~~~p~~~i~-~~~~p~g~~~~~~~~~~~~~~~~l~~~~~~l~~-~g~d~iviaCnta----~~~~~l 92 (228)
T 2eq5_A 19 DKEILNLHGRIIESAFPELKVV-SRCIEDQPKGIYNEETEREAEPKIIRLAKEFER-EGVDAIIISCAAD----PAVEKV 92 (228)
T ss_dssp CHHHHTHHHHHHHHHCTTEEEE-EEECSSCTTCCSSHHHHHHHHHHHHHHHHHHHH-TTCSEEEECSTTC----TTHHHH
T ss_pred CHHHHHHHHHHHHhhCCCCeEE-EEeCCCCchhccccccHHHhHHHHHHHHHHHHH-CCCCEEEEeCCch----HHHHHH
Confidence 3455555555555554344433 24444332222221 11233434443 5899999999754 334555
Q ss_pred HhhCCCcEE
Q 021144 264 RKVTSKPVI 272 (317)
Q Consensus 264 ~~~~~~pl~ 272 (317)
++..+.|++
T Consensus 93 ~~~~~iPvi 101 (228)
T 2eq5_A 93 RKLLSIPVI 101 (228)
T ss_dssp HHHCSSCEE
T ss_pred HHhCCCCEe
Confidence 555567754
No 395
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=34.15 E-value=54 Score=30.03 Aligned_cols=45 Identities=18% Similarity=0.151 Sum_probs=33.7
Q ss_pred HHHHHHHHHHhCCCCEEEecc--CCCHHHHHHHHHHHHHhCCCccEEEEE
Q 021144 169 FHRRRVLILANSGADLIAFET--IPNKLEAKAYAELLEEEGITIPAWFSF 216 (317)
Q Consensus 169 ~h~~qi~~l~~~gvD~l~~ET--~p~~~Ea~a~~~~~~~~~~~~pv~iSf 216 (317)
.|.+.+...+++|..+|. |. -.+++|++.+++++++.+ +.+++.+
T Consensus 79 ~H~~~~~~al~aGk~Vl~-EKPla~~~~e~~~l~~~a~~~g--~~~~v~~ 125 (364)
T 3e82_A 79 THAPLARLALNAGKHVVV-DKPFTLDMQEARELIALAEEKQ--RLLSVFH 125 (364)
T ss_dssp GHHHHHHHHHHTTCEEEE-CSCSCSSHHHHHHHHHHHHHTT--CCEEECC
T ss_pred HHHHHHHHHHHCCCcEEE-eCCCcCCHHHHHHHHHHHHHhC--CeEEEEe
Confidence 377777778888987654 86 668999999999888765 5565544
No 396
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=34.14 E-value=60 Score=27.95 Aligned_cols=49 Identities=12% Similarity=0.123 Sum_probs=32.0
Q ss_pred HHHHHHHHhCCCCEEEec-----cCCCHHHHHHHHHHHHHhCCCccEEEEEEEcC
Q 021144 171 RRRVLILANSGADLIAFE-----TIPNKLEAKAYAELLEEEGITIPAWFSFNSKD 220 (317)
Q Consensus 171 ~~qi~~l~~~gvD~l~~E-----T~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~ 220 (317)
.+.++.+.++|+|++=+- .+|++.....+++.+++.. ++|+-+-|-+.+
T Consensus 20 ~~~i~~~~~~Gad~ihldi~DG~fvp~~~~g~~~v~~lr~~~-~~~~~vhlmv~d 73 (230)
T 1tqj_A 20 GEEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPLT-KKTLDVHLMIVE 73 (230)
T ss_dssp HHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHGGGC-CSEEEEEEESSS
T ss_pred HHHHHHHHHcCCCEEEEEEEecCCCcchhhhHHHHHHHHhhc-CCcEEEEEEccC
Confidence 346778888999987332 3355554446666777754 578888776654
No 397
>3sig_A PArg, poly(ADP-ribose) glycohydrolase; HET: AR6; 1.28A {Thermomonospora curvata} PDB: 3sih_A 3sii_A* 3sij_A
Probab=33.99 E-value=1.3e+02 Score=26.98 Aligned_cols=65 Identities=22% Similarity=0.242 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCCCeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHHHH
Q 021144 91 TEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFH 170 (317)
Q Consensus 91 ~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~~~~~~~~~~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~~h 170 (317)
..+.+++++..++.+.+.+.. .+.+.+|.|.+|. | .|+. ..++..+.+
T Consensus 189 ~~~~~~~l~~rir~vL~iA~~------------------~g~~~LVLGA~GC-G-----------vfgn--pp~~VA~~~ 236 (277)
T 3sig_A 189 VEEIGRVLRGRAAKVLAAARH------------------HGHRRLVLGAWGC-G-----------VFGN--DPAQVAETF 236 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH------------------TTCCEEEECCTTS-S-----------TTCC--CHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHH------------------cCCCEEEECCccc-C-----------cCCC--CHHHHHHHH
Confidence 345677888888888777654 2457899998885 4 4554 778888888
Q ss_pred HHHHHH---HHhCCCCEEEec
Q 021144 171 RRRVLI---LANSGADLIAFE 188 (317)
Q Consensus 171 ~~qi~~---l~~~gvD~l~~E 188 (317)
++.+.. +. ...+-|+|=
T Consensus 237 ~~vL~~~~~f~-~~f~~VvFA 256 (277)
T 3sig_A 237 AGLLLDGGPFA-GRFAHVVFA 256 (277)
T ss_dssp HHHHSTTCTTT-TTCSEEEEE
T ss_pred HHHHhhcchhc-CCceEEEEE
Confidence 875542 21 245555543
No 398
>2ocz_A 3-dehydroquinate dehydratase; structural genomics, DH streptococcus pyogenes, dehydroshikimate, PSI-2, protein ST initiative; HET: MSE; 1.85A {Streptococcus pyogenes serotype M1}
Probab=33.83 E-value=2.3e+02 Score=24.36 Aligned_cols=101 Identities=13% Similarity=0.059 Sum_probs=58.3
Q ss_pred CCHHHHHHHHHHHHHHHHhCC-CCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhc
Q 021144 161 VSLETLKEFHRRRVLILANSG-ADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADS 239 (317)
Q Consensus 161 ~s~~el~~~h~~qi~~l~~~g-vD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~ 239 (317)
.+.++..+.+ +..++.| +|++=+|-... .+ +++.++ + ...+++|+.--+. ++ +.+.+.+..+..
T Consensus 75 ~~~~~~~~ll----~~~~~~g~~d~iDvEl~~~-~~---~i~~~~--~-~~kvI~S~Hdf~~--tp--~el~~~~~~~~~ 139 (231)
T 2ocz_A 75 LSSQEYVDII----KEINAIYNPDYIDFEYFTH-KS---VFQEML--D-FPNLILSYHNFEE--TP--ENLMEAFSEMTK 139 (231)
T ss_dssp CCHHHHHHHH----HHHHHHHCCSEEEEETTTT-GG---GGGGGT--T-CSSEEEEEEESSC--CC--TTHHHHHHHHHH
T ss_pred CCHHHHHHHH----HHHHHcCCCCEEEEECCCC-HH---HHHHhh--c-CCeEEEEecCCCC--CH--HHHHHHHHHHHH
Confidence 3555544444 4445455 99999996543 22 222222 2 3789999953221 11 456666666654
Q ss_pred CCCceEEEEcCC--ChhhhHHHHHHHHh----hCCCcEEEEeCC
Q 021144 240 CEQVVAVGINCT--SPRFIHGLILSVRK----VTSKPVIIYPNS 277 (317)
Q Consensus 240 ~~~~~aiGvNC~--~p~~~~~~l~~l~~----~~~~pl~vyPNa 277 (317)
.+++.+=+-+. +++.+..+++...+ ..+.|++.+.=+
T Consensus 140 -~gaDivKia~~a~~~~D~l~ll~~~~~~~~~~~~~P~I~~~MG 182 (231)
T 2ocz_A 140 -LAPRVVKIAVMPQSEQDVLDLMNYTRGFKTLNPEQEFATISMG 182 (231)
T ss_dssp -TCCSEEEEEECCSSHHHHHHHHHHHHHHHHHCTTCEEEEEECH
T ss_pred -cCCCEEEEEeecCCHHHHHHHHHHHHHHhhccCCCCEEEEEcC
Confidence 46676666664 56777777664433 246799888764
No 399
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=33.80 E-value=1.1e+02 Score=28.99 Aligned_cols=62 Identities=18% Similarity=0.095 Sum_probs=35.2
Q ss_pred HHHHHhCCCCEEEec-------c--------CCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhh
Q 021144 174 VLILANSGADLIAFE-------T--------IPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIAD 238 (317)
Q Consensus 174 i~~l~~~gvD~l~~E-------T--------~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~ 238 (317)
++.+.++|+|+|.+- | .|.+.-+..+.+++++. ++||+.+- -+. +..++++.+.
T Consensus 198 A~~a~~aGAD~I~vG~g~Gs~~~tr~~~g~g~p~~~al~~v~~~~~~~--~IPVIA~G------GI~---~~~di~kala 266 (400)
T 3ffs_A 198 TKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKF--GIPIIADG------GIR---YSGDIGKALA 266 (400)
T ss_dssp HHHHHHTTCSEEEECC---------CCSCBCCCHHHHHHHHHHHHTTT--TCCEEEES------CCC---SHHHHHHHHT
T ss_pred HHHHHHcCCCEEEEeCCCCcCcccccccccchhHHHHHHHHHHHHHhc--CCCEEecC------CCC---CHHHHHHHHH
Confidence 456778999999882 1 24443334444444332 48988543 122 3456666665
Q ss_pred cCCCceEEEE
Q 021144 239 SCEQVVAVGI 248 (317)
Q Consensus 239 ~~~~~~aiGv 248 (317)
.++++|++
T Consensus 267 --lGAd~V~v 274 (400)
T 3ffs_A 267 --VGASSVMI 274 (400)
T ss_dssp --TTCSEEEE
T ss_pred --cCCCEEEE
Confidence 36677665
No 400
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=33.73 E-value=66 Score=29.41 Aligned_cols=45 Identities=9% Similarity=0.085 Sum_probs=28.2
Q ss_pred HHHHHHHHHHhCCCCEEEecc--CCCHHHHHHHHHHHHHhCCCccEEEEE
Q 021144 169 FHRRRVLILANSGADLIAFET--IPNKLEAKAYAELLEEEGITIPAWFSF 216 (317)
Q Consensus 169 ~h~~qi~~l~~~gvD~l~~ET--~p~~~Ea~a~~~~~~~~~~~~pv~iSf 216 (317)
.|.+.+..++++|.++| +|- -.+++|++.+++++++.+ +++++.|
T Consensus 100 ~H~~~~~~al~aGkhVl-~EKPla~~~~ea~~l~~~a~~~g--~~l~v~~ 146 (361)
T 3u3x_A 100 ERAELAIRAMQHGKDVL-VDKPGMTSFDQLAKLRRVQAETG--RIFSILY 146 (361)
T ss_dssp HHHHHHHHHHHTTCEEE-EESCSCSSHHHHHHHHHHHHTTC--CCEEEEC
T ss_pred HHHHHHHHHHHCCCeEE-EeCCCCCCHHHHHHHHHHHHHcC--CEEEEec
Confidence 56666766777776654 362 236777777777776644 5565555
No 401
>1twi_A Diaminopimelate decarboxylase; antibiotic resistance, lysine biosynthesis, structural genomics, NYSGXRC, PSI; HET: LYS PLP; 2.00A {Methanocaldococcus jannaschii} SCOP: b.49.2.3 c.1.6.1 PDB: 1tuf_A*
Probab=33.65 E-value=2.9e+02 Score=25.57 Aligned_cols=71 Identities=20% Similarity=0.140 Sum_probs=42.9
Q ss_pred HHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCC---------C--cccCCCc-----HHHHHHHhhcC
Q 021144 177 LANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDG---------I--NVVSGDS-----ILECASIADSC 240 (317)
Q Consensus 177 l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~---------~--~l~~G~~-----l~~a~~~~~~~ 240 (317)
+++.|+-.+.+ -+..|++.+.+++++.+...+|++-+....+ | ..+-|.+ +.++++.+...
T Consensus 123 a~~~~i~~~~v---ds~~el~~l~~~a~~~~~~~~v~lrvn~g~~~~~~~~~~tG~~~~rfG~~~~~~~~~~~~~~~~~~ 199 (434)
T 1twi_A 123 GIEANIRAFNV---DSISELILINETAKELGETANVAFRINPNVNPKTHPKISTGLKKNKFGLDVESGIAMKAIKMALEM 199 (434)
T ss_dssp HHHTTCSEEEE---CSHHHHHHHHHHHHHHTCCEEEEEEEECCCCTTTCHHHHHHHHHSSCSEESTTSHHHHHHHHHHHC
T ss_pred HHHCCCCEEEE---CCHHHHHHHHHHHHhcCCCCeEEEEECCCCCCCCCcccccCCCCCCccCChhhhHHHHHHHHHHhC
Confidence 33456544444 4788888888877776645677777765321 0 1344544 44555555555
Q ss_pred CCceEEEEcC
Q 021144 241 EQVVAVGINC 250 (317)
Q Consensus 241 ~~~~aiGvNC 250 (317)
.++...|+-|
T Consensus 200 ~~l~l~Gl~~ 209 (434)
T 1twi_A 200 EYVNVVGVHC 209 (434)
T ss_dssp SSEEEEEEEC
T ss_pred CCCCEEEEEE
Confidence 5777778777
No 402
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=33.65 E-value=58 Score=28.82 Aligned_cols=45 Identities=18% Similarity=0.250 Sum_probs=32.7
Q ss_pred HHHHHHHHHHhCCCCEEEec--cCCCHHHHHHHHHHHHHhCCCccEEEEE
Q 021144 169 FHRRRVLILANSGADLIAFE--TIPNKLEAKAYAELLEEEGITIPAWFSF 216 (317)
Q Consensus 169 ~h~~qi~~l~~~gvD~l~~E--T~p~~~Ea~a~~~~~~~~~~~~pv~iSf 216 (317)
.|.+.+..++++|..+| +| .-.+.+|++.+++++++.+ +++++.|
T Consensus 78 ~h~~~~~~al~~gk~vl-~EKP~~~~~~~~~~l~~~a~~~g--~~~~v~~ 124 (308)
T 3uuw_A 78 THYEIIKILLNLGVHVY-VDKPLASTVSQGEELIELSTKKN--LNLMVGF 124 (308)
T ss_dssp GHHHHHHHHHHTTCEEE-ECSSSSSSHHHHHHHHHHHHHHT--CCEEECC
T ss_pred hHHHHHHHHHHCCCcEE-EcCCCCCCHHHHHHHHHHHHHcC--CEEEEee
Confidence 36677777888998854 68 4458999999999888765 5555444
No 403
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=33.60 E-value=2.3e+02 Score=26.04 Aligned_cols=98 Identities=14% Similarity=0.172 Sum_probs=55.2
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEEEeccC------------------CCHHHHHHHHHHHHH-hCCCccEEEEEEEcCCC
Q 021144 162 SLETLKEFHRRRVLILANSGADLIAFETI------------------PNKLEAKAYAELLEE-EGITIPAWFSFNSKDGI 222 (317)
Q Consensus 162 s~~el~~~h~~qi~~l~~~gvD~l~~ET~------------------p~~~Ea~a~~~~~~~-~~~~~pv~iSf~~~~~~ 222 (317)
+.+++ .++++.+.+.|.|.|=+=.- +++++...+++++++ .+.+.++.+-+ +
T Consensus 137 ~~~~~----~~~a~~~~~~Gf~~vKik~g~~~~g~~~~~~~~gg~~~~~~~~~~e~v~avr~a~G~d~~l~vD~----n- 207 (392)
T 2poz_A 137 TPDEF----ARAVERPLKEGYGALKFYPLAQRVGSALQHVTRRSMSAEAIELAYRRVKAVRDAAGPEIELMVDL----S- 207 (392)
T ss_dssp SHHHH----HHHTHHHHHTTCSEEEECCCCEEETTEEECCBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEEC----T-
T ss_pred CHHHH----HHHHHHHHHcCCCEEEEecccccccccccccccCCcchhhHHHHHHHHHHHHHhcCCCCEEEEEC----C-
Confidence 55554 34555566678887754321 345666777888877 45567776533 2
Q ss_pred cccCCCcHHHHHHHhhcC--CCceEEEEcCCChhhhHHHHHHHHhhCCCcEEE
Q 021144 223 NVVSGDSILECASIADSC--EQVVAVGINCTSPRFIHGLILSVRKVTSKPVII 273 (317)
Q Consensus 223 ~l~~G~~l~~a~~~~~~~--~~~~aiGvNC~~p~~~~~~l~~l~~~~~~pl~v 273 (317)
.|-++.++++.+... .++..|=--| .++. ...++.+++.++.||+.
T Consensus 208 ---~~~~~~~a~~~~~~l~~~~i~~iE~P~-~~~~-~~~~~~l~~~~~ipIa~ 255 (392)
T 2poz_A 208 ---GGLTTDETIRFCRKIGELDICFVEEPC-DPFD-NGALKVISEQIPLPIAV 255 (392)
T ss_dssp ---TCSCHHHHHHHHHHHGGGCEEEEECCS-CTTC-HHHHHHHHHHCSSCEEE
T ss_pred ---CCCCHHHHHHHHHHHHhcCCCEEECCC-Cccc-HHHHHHHHhhCCCCEEe
Confidence 456778877665431 2444332222 2222 34566677777788753
No 404
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=33.59 E-value=43 Score=30.72 Aligned_cols=44 Identities=18% Similarity=0.103 Sum_probs=32.1
Q ss_pred HHHHHHHHHhCCCCEEEecc--CCCHHHHHHHHHHHHHhCCCccEEEEE
Q 021144 170 HRRRVLILANSGADLIAFET--IPNKLEAKAYAELLEEEGITIPAWFSF 216 (317)
Q Consensus 170 h~~qi~~l~~~gvD~l~~ET--~p~~~Ea~a~~~~~~~~~~~~pv~iSf 216 (317)
|.+.+...+++|.+++ +|- -.+++|++.+++++++.+ +++++.+
T Consensus 96 h~~~~~~al~~Gk~V~-~EKP~a~~~~~~~~l~~~a~~~~--~~~~v~~ 141 (383)
T 3oqb_A 96 RPGLLTQAINAGKHVY-CEKPIATNFEEALEVVKLANSKG--VKHGTVQ 141 (383)
T ss_dssp SHHHHHHHHTTTCEEE-ECSCSCSSHHHHHHHHHHHHHTT--CCEEECC
T ss_pred HHHHHHHHHHCCCeEE-EcCCCCCCHHHHHHHHHHHHHcC--CeEEEEe
Confidence 6677888888998866 685 468889999988887754 4444433
No 405
>2oho_A Glutamate racemase; isomerase; 2.25A {Streptococcus pyogenes m1 gas} PDB: 2ohg_A 2ohv_A*
Probab=33.52 E-value=1.6e+02 Score=25.77 Aligned_cols=28 Identities=21% Similarity=0.338 Sum_probs=24.7
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEec
Q 021144 161 VSLETLKEFHRRRVLILANSGADLIAFE 188 (317)
Q Consensus 161 ~s~~el~~~h~~qi~~l~~~gvD~l~~E 188 (317)
.+.+++.++-.+.++.|.+.|+|+|++=
T Consensus 54 ~s~~~i~~~~~~~~~~L~~~g~d~ivia 81 (273)
T 2oho_A 54 RPKKQIKEYTWELVNFLLTQNVKMIVFA 81 (273)
T ss_dssp SCHHHHHHHHHHHHHHHHTTTCSEEEEC
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEe
Confidence 4779999999999999999999999884
No 406
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=33.48 E-value=1.4e+02 Score=21.84 Aligned_cols=74 Identities=9% Similarity=-0.025 Sum_probs=35.6
Q ss_pred CCCCEEEeccC-CCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCCChhhhHH
Q 021144 180 SGADLIAFETI-PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPRFIHG 258 (317)
Q Consensus 180 ~gvD~l~~ET~-p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~~p~~~~~ 258 (317)
..+|+++++.. |... ...+++.+++..+..|+++-- +-.+.......+. .+++.+-.-=..++.+..
T Consensus 50 ~~~dlvi~d~~l~~~~-g~~~~~~l~~~~~~~~ii~~s---------~~~~~~~~~~~~~--~g~~~~l~kP~~~~~l~~ 117 (137)
T 3hdg_A 50 HAPDVIITDIRMPKLG-GLEMLDRIKAGGAKPYVIVIS---------AFSEMKYFIKAIE--LGVHLFLPKPIEPGRLME 117 (137)
T ss_dssp HCCSEEEECSSCSSSC-HHHHHHHHHHTTCCCEEEECC---------CCCCHHHHHHHHH--HCCSEECCSSCCHHHHHH
T ss_pred cCCCEEEEeCCCCCCC-HHHHHHHHHhcCCCCcEEEEe---------cCcChHHHHHHHh--CCcceeEcCCCCHHHHHH
Confidence 46889888843 4433 334455566655456655321 1122333334443 244544333234455555
Q ss_pred HHHHHHh
Q 021144 259 LILSVRK 265 (317)
Q Consensus 259 ~l~~l~~ 265 (317)
.|+.+.+
T Consensus 118 ~i~~~~~ 124 (137)
T 3hdg_A 118 TLEDFRH 124 (137)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555543
No 407
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=33.47 E-value=1.7e+02 Score=24.03 Aligned_cols=83 Identities=13% Similarity=-0.022 Sum_probs=45.0
Q ss_pred HHHHhCCCCEEEeccC-CCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCCC-
Q 021144 175 LILANSGADLIAFETI-PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTS- 252 (317)
Q Consensus 175 ~~l~~~gvD~l~~ET~-p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~~- 252 (317)
+.+.+.|+|.+.++.. ....+++ +.. .++++.+++. +..++..... .+++.|.++-..
T Consensus 80 ~~a~~~gad~v~l~~~~~~~~~~~-------~~~--~~~~~~v~~~---------t~~e~~~~~~--~g~d~i~~~~~~~ 139 (215)
T 1xi3_A 80 DVALAVDADGVQLGPEDMPIEVAK-------EIA--PNLIIGASVY---------SLEEALEAEK--KGADYLGAGSVFP 139 (215)
T ss_dssp HHHHHHTCSEEEECTTSCCHHHHH-------HHC--TTSEEEEEES---------SHHHHHHHHH--HTCSEEEEECSSC
T ss_pred HHHHHcCCCEEEECCccCCHHHHH-------HhC--CCCEEEEecC---------CHHHHHHHHh--cCCCEEEEcCCcc
Confidence 4556679999998753 2333322 221 2345555442 3455544333 367888875421
Q ss_pred -------hhhhHHHHHHHHhhCCCcEEEEeCCCC
Q 021144 253 -------PRFIHGLILSVRKVTSKPVIIYPNSGE 279 (317)
Q Consensus 253 -------p~~~~~~l~~l~~~~~~pl~vyPNaG~ 279 (317)
...-...++++++..+.|+++ .+|-
T Consensus 140 ~~~~~~~~~~~~~~l~~l~~~~~~pvia--~GGI 171 (215)
T 1xi3_A 140 TKTKEDARVIGLEGLRKIVESVKIPVVA--IGGI 171 (215)
T ss_dssp C----CCCCCHHHHHHHHHHHCSSCEEE--ESSC
T ss_pred CCCCCCCCCcCHHHHHHHHHhCCCCEEE--ECCc
Confidence 122345667777666778654 5553
No 408
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=33.43 E-value=2.5e+02 Score=24.66 Aligned_cols=90 Identities=10% Similarity=0.104 Sum_probs=48.5
Q ss_pred HHHHHHhCCCCEEEecc----CCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEE-E
Q 021144 173 RVLILANSGADLIAFET----IPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAV-G 247 (317)
Q Consensus 173 qi~~l~~~gvD~l~~ET----~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~ai-G 247 (317)
+++.+++.|+|+|=+-. ++..+|++-++..+++.. ++| +|+ |....+-+-+.++...+...| -
T Consensus 30 ~a~~~v~~GAdiIDIg~g~~~v~~~ee~~rvv~~i~~~~-~~p--isI---------DT~~~~v~~aAl~a~~Ga~iINd 97 (262)
T 1f6y_A 30 WARRQEEGGARALDLNVGPAVQDKVSAMEWLVEVTQEVS-NLT--LCL---------DSTNIKAIEAGLKKCKNRAMINS 97 (262)
T ss_dssp HHHHHHHHTCSEEEEBCC----CHHHHHHHHHHHHHTTC-CSE--EEE---------ECSCHHHHHHHHHHCSSCEEEEE
T ss_pred HHHHHHHCCCcEEEECCCCCCCChHHHHHHHHHHHHHhC-CCe--EEE---------eCCCHHHHHHHHhhCCCCCEEEE
Confidence 56667779999996653 556778888888888642 344 455 222232222223221243332 2
Q ss_pred EcCCChhhhHHHHHHHHhhCCCcEEEEeC
Q 021144 248 INCTSPRFIHGLILSVRKVTSKPVIIYPN 276 (317)
Q Consensus 248 vNC~~p~~~~~~l~~l~~~~~~pl~vyPN 276 (317)
||-. .+.+...++.+++ .+.|+++.++
T Consensus 98 vs~~-~d~~~~~~~~~a~-~~~~vvlmh~ 124 (262)
T 1f6y_A 98 TNAE-REKVEKLFPLAVE-HGAALIGLTM 124 (262)
T ss_dssp ECSC-HHHHHHHHHHHHH-TTCEEEEESC
T ss_pred CCCC-cccHHHHHHHHHH-hCCcEEEEcC
Confidence 4433 2322334443333 4779999998
No 409
>2jfq_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: DGL; 2.15A {Staphylococcus aureus}
Probab=33.41 E-value=1.5e+02 Score=26.28 Aligned_cols=31 Identities=13% Similarity=0.116 Sum_probs=26.2
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEec--cCC
Q 021144 161 VSLETLKEFHRRRVLILANSGADLIAFE--TIP 191 (317)
Q Consensus 161 ~s~~el~~~h~~qi~~l~~~gvD~l~~E--T~p 191 (317)
.+.+++.++-.+.++.|.+.|+|+|++= |.+
T Consensus 64 ~s~~~i~~~~~~~~~~L~~~g~d~IVIaCNTas 96 (286)
T 2jfq_A 64 RPGEQVKQYTVEIARKLMEFDIKMLVIACNTAT 96 (286)
T ss_dssp SCHHHHHHHHHHHHHHHTTSCCSEEEECCHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCCchh
Confidence 5789999999989999999999999884 554
No 410
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=33.22 E-value=2.5e+02 Score=24.57 Aligned_cols=101 Identities=13% Similarity=0.066 Sum_probs=58.0
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEE-----EeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCC-CcccCCCc--HHHH
Q 021144 162 SLETLKEFHRRRVLILANSGADLI-----AFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDG-INVVSGDS--ILEC 233 (317)
Q Consensus 162 s~~el~~~h~~qi~~l~~~gvD~l-----~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~-~~l~~G~~--l~~a 233 (317)
+.+++.. +++.+...|+|++ +++..++..++...+..+++...++|+++++....+ |...++.. -.+.
T Consensus 30 ~~~e~~~----~~~~~~~~~~D~vElRvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~~~~~~~~~~l 105 (257)
T 2yr1_A 30 DDRKVLR----EAEEVCRKQPDLLEWRADFFRAIDDQERVLATANGLRNIAGEIPILFTIRSEREGGQPIPLNEAEVRRL 105 (257)
T ss_dssp SHHHHHH----HHHHHHHSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHSSSCCEEEECCCTTTTCCCCSSCHHHHHHH
T ss_pred CHHHHHH----HHHHHhhcCCCEEEEEeecccccCcHHHHHHHHHHHHHhccCCCEEEEEeecccCCCCCCCCHHHHHHH
Confidence 5566544 3455566788887 567777787877777778775336899998876543 44324432 1123
Q ss_pred HHHhhcCCCceEEEEcCCChhhhHHHHHHHHhh
Q 021144 234 ASIADSCEQVVAVGINCTSPRFIHGLILSVRKV 266 (317)
Q Consensus 234 ~~~~~~~~~~~aiGvNC~~p~~~~~~l~~l~~~ 266 (317)
+..+.....++.|=|--..++.+..+++..++.
T Consensus 106 l~~~~~~g~~d~iDvEl~~~~~~~~l~~~~~~~ 138 (257)
T 2yr1_A 106 IEAICRSGAIDLVDYELAYGERIADVRRMTEEC 138 (257)
T ss_dssp HHHHHHHTCCSEEEEEGGGTTHHHHHHHHHHHT
T ss_pred HHHHHHcCCCCEEEEECCCChhHHHHHHHHHhC
Confidence 333322222666666654333555565554443
No 411
>2wx3_A MRNA-decapping enzyme 1A; structural protein, trimerization module, P-BODY component, asymmetric assembly; 2.31A {Homo sapiens}
Probab=33.17 E-value=21 Score=23.81 Aligned_cols=18 Identities=17% Similarity=0.396 Sum_probs=15.6
Q ss_pred cCCChHHHHHHHHHHHHh
Q 021144 50 LVSSPHLVRKVHLDYLDA 67 (317)
Q Consensus 50 ll~~Pe~V~~iH~~Yl~A 67 (317)
+-++++.|.+||+.|+..
T Consensus 24 IqnD~~Fl~~IHeAYl~s 41 (51)
T 2wx3_A 24 IKNDSSFLSTLHEVYLQV 41 (51)
T ss_dssp HHHCHHHHHHHHHHHHHT
T ss_pred HHcCHHHHHHHHHHHHHH
Confidence 347899999999999986
No 412
>4gvf_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: NDG NAG MES; 1.35A {Salmonella enterica subsp} PDB: 4gvg_A* 4gvh_A* 4gvi_A*
Probab=33.08 E-value=42 Score=31.29 Aligned_cols=56 Identities=14% Similarity=0.246 Sum_probs=38.4
Q ss_pred cEEEEEEEcCCCcccCCCcHHH-HHHHhhcCCCceEEEE---cCCChhhhHHHHHHHHhhCCCcEEEEeC
Q 021144 211 PAWFSFNSKDGINVVSGDSILE-CASIADSCEQVVAVGI---NCTSPRFIHGLILSVRKVTSKPVIIYPN 276 (317)
Q Consensus 211 pv~iSf~~~~~~~l~~G~~l~~-a~~~~~~~~~~~aiGv---NC~~p~~~~~~l~~l~~~~~~pl~vyPN 276 (317)
|+++.| .|+++.+ ..+.+.+ ..+-+|-+ |..+|+.+..+++.+++..+.|+++--+
T Consensus 3 ~~m~g~---------~G~~l~~~~~~~i~~-~~vGGvilf~rN~~~~~q~~~l~~~lq~~~~iPlli~vD 62 (349)
T 4gvf_A 3 PVMLNV---------EGCELDAEEREILAH-PLVGGLILFTRNYHDPEQLRELVRQIRAASRNHLVVAVD 62 (349)
T ss_dssp SEEECC---------SSSSCCHHHHHHHTC-TTEEEEEECGGGCSCHHHHHHHHHHHHHHCSSCCEEEEC
T ss_pred CEEEeC---------CCCCCCHHHHHHHHc-CCceEEEEeCCCCCCHHHHHHHHHHHHHhcCCCceeeec
Confidence 666665 4555433 3344543 56666655 9989999999999999888888665444
No 413
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=32.81 E-value=1.9e+02 Score=26.80 Aligned_cols=129 Identities=12% Similarity=0.050 Sum_probs=71.4
Q ss_pred HHHHHHHHHHHhCCCCEEEeccCCCHHHHHHHHHH-----------------HHHhC-CCccEEEEEEEcCCCcccCCCc
Q 021144 168 EFHRRRVLILANSGADLIAFETIPNKLEAKAYAEL-----------------LEEEG-ITIPAWFSFNSKDGINVVSGDS 229 (317)
Q Consensus 168 ~~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~-----------------~~~~~-~~~pv~iSf~~~~~~~l~~G~~ 229 (317)
++|++..+.-.+.|.+++ =|..+...+..+.+. +++.+ .++||++|- |. .+=+.
T Consensus 91 e~~~~L~~~~~~~Gi~~~--st~~d~~svd~l~~~~v~~~KI~S~~~~n~~LL~~va~~gkPviLst-----Gm-at~~E 162 (349)
T 2wqp_A 91 EDEIKLKEYVESKGMIFI--STLFSRAAALRLQRMDIPAYKIGSGECNNYPLIKLVASFGKPIILST-----GM-NSIES 162 (349)
T ss_dssp HHHHHHHHHHHHTTCEEE--EEECSHHHHHHHHHHTCSCEEECGGGTTCHHHHHHHHTTCSCEEEEC-----TT-CCHHH
T ss_pred HHHHHHHHHHHHhCCeEE--EeeCCHHHHHHHHhcCCCEEEECcccccCHHHHHHHHhcCCeEEEEC-----CC-CCHHH
Confidence 345555555555666555 355555555544332 23221 359999875 21 11122
Q ss_pred HHHHHHHhhcCCCceEEEEcCCC--h---h-hhHHHHHHHHhhC-CCcEEEEeCCCC--c----------------cccc
Q 021144 230 ILECASIADSCEQVVAVGINCTS--P---R-FIHGLILSVRKVT-SKPVIIYPNSGE--T----------------YNAE 284 (317)
Q Consensus 230 l~~a~~~~~~~~~~~aiGvNC~~--p---~-~~~~~l~~l~~~~-~~pl~vyPNaG~--~----------------~d~~ 284 (317)
+..|++.+..... ..+.+-|+. | + .=...+..|++.+ ..|+ .||.=.. . ++.
T Consensus 163 i~~Ave~i~~~G~-~iiLlhc~s~Yp~~~~~~nL~ai~~lk~~f~~lpV-g~sdHt~G~~~~~AAvAlGA~iIEkH~tl- 239 (349)
T 2wqp_A 163 IKKSVEIIREAGV-PYALLHCTNIYPTPYEDVRLGGMNDLSEAFPDAII-GLSDHTLDNYACLGAVALGGSILERHFTD- 239 (349)
T ss_dssp HHHHHHHHHHHTC-CEEEEECCCCSSCCGGGCCTHHHHHHHHHCTTSEE-EEECCSSSSHHHHHHHHHTCCEEEEEBCS-
T ss_pred HHHHHHHHHHcCC-CEEEEeccCCCCCChhhcCHHHHHHHHHHCCCCCE-EeCCCCCcHHHHHHHHHhCCCEEEeCCCc-
Confidence 3446666654323 667778973 2 2 2246778888887 7898 4776431 0 111
Q ss_pred cccc--c-ccCCCChhhHHHHHHHHH
Q 021144 285 LKKW--V-VSFSLHFFPLELILNPFA 307 (317)
Q Consensus 285 ~~~w--~-~~~~~~~~~~~~~~~~w~ 307 (317)
.+.| . ....++|++|.+.+....
T Consensus 240 d~a~~G~D~~~SL~p~ef~~lv~~ir 265 (349)
T 2wqp_A 240 RMDRPGPDIVCSMNPDTFKELKQGAH 265 (349)
T ss_dssp CTTCCSTTGGGCBCHHHHHHHHHHHH
T ss_pred cccCCCCChhhhCCHHHHHHHHHHHH
Confidence 1334 1 234678999999887654
No 414
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=32.72 E-value=19 Score=32.21 Aligned_cols=29 Identities=28% Similarity=0.300 Sum_probs=25.6
Q ss_pred cCCChHHHHHHHHHHHHhhcccccccc-cc
Q 021144 50 LVSSPHLVRKVHLDYLDAGANIIITAS-YQ 78 (317)
Q Consensus 50 ll~~Pe~V~~iH~~Yl~AGAdiI~TnT-y~ 78 (317)
+++++|.|++.-+-=++||||.|-|.| |.
T Consensus 145 ~L~d~e~i~~a~~ia~eaGADfVKTSTGf~ 174 (260)
T 1p1x_A 145 ELKDEALIRKASEISIKAGADFIKTSTGKV 174 (260)
T ss_dssp HHCSHHHHHHHHHHHHHTTCSEEECCCSCS
T ss_pred cCCcHHHHHHHHHHHHHhCCCEEEeCCCCC
Confidence 458889899999999999999999998 54
No 415
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A
Probab=32.70 E-value=1.1e+02 Score=29.61 Aligned_cols=71 Identities=18% Similarity=0.260 Sum_probs=47.6
Q ss_pred EEeeCCC-cCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHh-CCCccEEE
Q 021144 137 AASVGSY-GAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEE-GITIPAWF 214 (317)
Q Consensus 137 agsiGP~-g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~-~~~~pv~i 214 (317)
.|.+++. |--+ ||...+-+ .++..+..+ ++..++.|+|+|++==+.+.++++.+.+++++. +.+.++|.
T Consensus 149 gG~L~~~KgvNl-Pg~~~~lp---~ltekD~~D-----i~~~l~~gvD~I~lsfV~saeDv~~~~~~l~~~~~~~i~Iia 219 (470)
T 1e0t_A 149 NGDLGENKGVNL-PGVSIALP---ALAEKDKQD-----LIFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHIIS 219 (470)
T ss_dssp CEEECSSCEEEC-SSCCCCCC---SSCHHHHHH-----HHHHHHHTCSEEEESSCCSHHHHHHHHHHHHTTTCTTCEEEE
T ss_pred CcEEeCCceeec-CCCcCCCC---CCCcCCHHH-----HHHHHHcCCCEEEECCCCCHHHHHHHHHHHHHhcCCCceEEE
Confidence 5666664 3223 23333322 266655444 556677899999999999999999999999887 64566665
Q ss_pred EE
Q 021144 215 SF 216 (317)
Q Consensus 215 Sf 216 (317)
-+
T Consensus 220 kI 221 (470)
T 1e0t_A 220 KI 221 (470)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 416
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=32.55 E-value=1.1e+02 Score=27.71 Aligned_cols=80 Identities=25% Similarity=0.350 Sum_probs=49.3
Q ss_pred eEEEecchHHHHHHCCCCCCCc-----------cccccccCCChHHHHHHHHHHHHhhccccccc---cccccHHHHHhC
Q 021144 22 YSVVDGGFATELERHGADLNDP-----------LWSAKCLVSSPHLVRKVHLDYLDAGANIIITA---SYQATIQGFEAK 87 (317)
Q Consensus 22 ~lilDGgmgT~L~~~G~~~~~~-----------lws~~~ll~~Pe~V~~iH~~Yl~AGAdiI~Tn---Ty~as~~~l~~~ 87 (317)
+-++||-+-..||..|+.+..+ +. .-+...+|+..+++ .+||+|+|... |.+...- . ..
T Consensus 131 vglidG~fr~~LEE~gm~~~~eve~I~~A~~~gL~-Ti~~v~~~eeA~am----A~agpDiI~~h~glT~gglIG-~-~~ 203 (286)
T 2p10_A 131 VGLIDGLFRQNLEETGMSYAQEVEMIAEAHKLDLL-TTPYVFSPEDAVAM----AKAGADILVCHMGLTTGGAIG-A-RS 203 (286)
T ss_dssp GGGCCHHHHHHHHHTTCCHHHHHHHHHHHHHTTCE-ECCEECSHHHHHHH----HHHTCSEEEEECSCC-----------
T ss_pred cccccchhhhhHhhcCCCHHHHHHHHHHHHHCCCe-EEEecCCHHHHHHH----HHcCCCEEEECCCCCCCCccc-C-CC
Confidence 4578999999999998755322 21 12335777777655 68999988643 2222211 1 12
Q ss_pred CCCHHHHHHHHHHHHHHHHHH
Q 021144 88 GFSTEEAEALLRRSVEIACEA 108 (317)
Q Consensus 88 g~~~~~~~~l~~~av~lAr~A 108 (317)
..+.+++.++++..++.+++.
T Consensus 204 avs~~~~~e~i~~i~~a~~~v 224 (286)
T 2p10_A 204 GKSMDDCVSLINECIEAARTI 224 (286)
T ss_dssp CCCHHHHHHHHHHHHHHHHHH
T ss_pred cccHHHhHHHHHHHHHHHHHh
Confidence 346667678888888888765
No 417
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=32.53 E-value=2.5e+02 Score=24.50 Aligned_cols=78 Identities=10% Similarity=-0.027 Sum_probs=47.8
Q ss_pred HHHHHHhCCCCEEEec--c-CCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEc
Q 021144 173 RVLILANSGADLIAFE--T-IPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGIN 249 (317)
Q Consensus 173 qi~~l~~~gvD~l~~E--T-~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvN 249 (317)
.++.+...|+|++++. - ..+..++...+.+++.. +.|++|-+. +.+..+....++ .++++|.+-
T Consensus 31 ~~e~a~~~GaD~v~lDlE~~~~~~~~~~~~~~a~~~~--~~~~~VRv~---------~~~~~~i~~~l~--~g~~~I~~P 97 (267)
T 2vws_A 31 MAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPY--ASQPVIRPV---------EGSKPLIKQVLD--IGAQTLLIP 97 (267)
T ss_dssp HHHHHHTTCCSEEEEETTTSCCCHHHHHHHHHHHTTS--SSEEEEECS---------SCCHHHHHHHHH--TTCCEEEEC
T ss_pred HHHHHHhCCCCEEEEcCCCCCCCHHHHHHHHHHHHhC--CCcEEEEeC---------CCCHHHHHHHHH--hCCCEEEeC
Confidence 3556777899999885 3 34455555555555432 467776542 122344444444 367888887
Q ss_pred CC-ChhhhHHHHHHH
Q 021144 250 CT-SPRFIHGLILSV 263 (317)
Q Consensus 250 C~-~p~~~~~~l~~l 263 (317)
-+ +++.+..+++.+
T Consensus 98 ~V~s~ee~~~~~~~~ 112 (267)
T 2vws_A 98 MVDTAEQARQVVSAT 112 (267)
T ss_dssp CCCSHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHH
Confidence 76 678877776655
No 418
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=32.51 E-value=18 Score=32.39 Aligned_cols=22 Identities=23% Similarity=0.315 Sum_probs=16.1
Q ss_pred HHHHHHHhhCCCcEEEEeCCCC
Q 021144 258 GLILSVRKVTSKPVIIYPNSGE 279 (317)
Q Consensus 258 ~~l~~l~~~~~~pl~vyPNaG~ 279 (317)
..++.+++..+.|+++.+++|-
T Consensus 197 ~~i~~l~~~~~~pvi~~a~GGI 218 (297)
T 2zbt_A 197 ELVKWVHDHGRLPVVNFAAGGI 218 (297)
T ss_dssp HHHHHHHHHSSCSSCEEBCSSC
T ss_pred HHHHHHHHhcCCCcEEEeeCCC
Confidence 4567777767788776788885
No 419
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=32.50 E-value=3.8e+02 Score=28.92 Aligned_cols=99 Identities=17% Similarity=0.148 Sum_probs=64.2
Q ss_pred HHHHHhCCCCEE-EeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCccc----CCCcHH---HHHHHhhcCCCceE
Q 021144 174 VLILANSGADLI-AFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVV----SGDSIL---ECASIADSCEQVVA 245 (317)
Q Consensus 174 i~~l~~~gvD~l-~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~----~G~~l~---~a~~~~~~~~~~~a 245 (317)
++...++|+|.| +|=...++...+.+.+.+++.+ .-+...+ |...+.+. .-.++. +.++.+.+ .+++.
T Consensus 633 v~~a~~~Gvd~irif~~~sd~~~~~~~~~~~~e~g--~~~~~~i-~~~~~~~~pe~~~~~~~~~~~~~a~~~~~-~Ga~~ 708 (1150)
T 3hbl_A 633 VQESAKAGIDVFRIFDSLNWVDQMKVANEAVQEAG--KISEGTI-CYTGDILNPERSNIYTLEYYVKLAKELER-EGFHI 708 (1150)
T ss_dssp HHHHHHTTCCEEEEECTTCCGGGGHHHHHHHHHTT--CEEEEEE-ECCSCTTCTTTCSSSSHHHHHHHHHHHHH-TTCSE
T ss_pred HHHHHhCCcCEEEEEeeCCHHHHHHHHHHHHHHHh--hheeEEE-eecccccChhhcCCCCHHHHHHHHHHHHH-cCCCe
Confidence 445667899999 6777788888888888888876 2222222 32222221 123444 44444444 57787
Q ss_pred EEEcCC----ChhhhHHHHHHHHhhCCCcEEEEeC
Q 021144 246 VGINCT----SPRFIHGLILSVRKVTSKPVIIYPN 276 (317)
Q Consensus 246 iGvNC~----~p~~~~~~l~~l~~~~~~pl~vyPN 276 (317)
|.+-=+ .|..+..+++.+++..+.||.+...
T Consensus 709 i~l~Dt~G~~~P~~~~~lv~~l~~~~~~~i~~H~H 743 (1150)
T 3hbl_A 709 LAIKDMAGLLKPKAAYELIGELKSAVDLPIHLHTH 743 (1150)
T ss_dssp EEEEETTCCCCHHHHHHHHHHHHHHCCSCEEEEEC
T ss_pred eeEcCccCCCCHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 777543 4899999999999888888876554
No 420
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=32.39 E-value=58 Score=29.32 Aligned_cols=31 Identities=13% Similarity=-0.015 Sum_probs=16.2
Q ss_pred hCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEE
Q 021144 179 NSGADLIAFETIPNKLEAKAYAELLEEEGITIPAW 213 (317)
Q Consensus 179 ~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~ 213 (317)
+..+|++.+=|-+..+ ...+..+++. + ++|+
T Consensus 71 ~~~vD~V~I~tP~~~H-~~~~~~al~a-G--khVl 101 (318)
T 3oa2_A 71 ATALDYVSICSPNYLH-YPHIAAGLRL-G--CDVI 101 (318)
T ss_dssp TTSCCEEEECSCGGGH-HHHHHHHHHT-T--CEEE
T ss_pred CCCCcEEEECCCcHHH-HHHHHHHHHC-C--CeEE
Confidence 4567777766644433 3444555542 2 5554
No 421
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=32.12 E-value=1e+02 Score=28.67 Aligned_cols=15 Identities=27% Similarity=0.355 Sum_probs=7.2
Q ss_pred hhccccccccccccH
Q 021144 67 AGANIIITASYQATI 81 (317)
Q Consensus 67 AGAdiI~TnTy~as~ 81 (317)
||+.+|+|---..++
T Consensus 53 A~~GLiitE~~~v~~ 67 (377)
T 2r14_A 53 ASAGLIISEATNISP 67 (377)
T ss_dssp TTSSCEEEEEEESSG
T ss_pred hcCCEEEEcceeecc
Confidence 355555554334443
No 422
>2dwu_A Glutamate racemase; isomerase; HET: DGL; 1.60A {Bacillus anthracis}
Probab=32.06 E-value=1.2e+02 Score=26.79 Aligned_cols=29 Identities=17% Similarity=0.135 Sum_probs=25.5
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEecc
Q 021144 161 VSLETLKEFHRRRVLILANSGADLIAFET 189 (317)
Q Consensus 161 ~s~~el~~~h~~qi~~l~~~gvD~l~~ET 189 (317)
.+.+++.++-.+.++.|.+.|+|+|++=.
T Consensus 49 ~s~~~i~~~~~~~~~~L~~~g~d~IViAC 77 (276)
T 2dwu_A 49 RSVEEVQSFVFEMVEFLKQFPLKALVVAC 77 (276)
T ss_dssp SCHHHHHHHHHHHHHHHTTSCEEEEEECC
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeC
Confidence 58899999999999999999999998764
No 423
>1ypx_A Putative vitamin-B12 independent methionine synth protein; alpha-beta protein; 2.60A {Listeria monocytogenes}
Probab=32.04 E-value=75 Score=29.59 Aligned_cols=17 Identities=18% Similarity=-0.048 Sum_probs=13.7
Q ss_pred HHHHHH-hCCCCEEEecc
Q 021144 173 RVLILA-NSGADLIAFET 189 (317)
Q Consensus 173 qi~~l~-~~gvD~l~~ET 189 (317)
.+..|. +.+||.|.+|.
T Consensus 256 i~~~l~~~~~~d~i~lE~ 273 (375)
T 1ypx_A 256 VAETLFGKLNIDGFFLEY 273 (375)
T ss_dssp GGHHHHTTCCCSEEEEEC
T ss_pred HHHHHHhhCCCCEEEEEe
Confidence 455676 89999999993
No 424
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=32.02 E-value=2.2e+02 Score=27.48 Aligned_cols=97 Identities=14% Similarity=0.058 Sum_probs=52.8
Q ss_pred HHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHH-hCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCC
Q 021144 173 RVLILANSGADLIAFETIPNKLEAKAYAELLEE-EGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCT 251 (317)
Q Consensus 173 qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~-~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~ 251 (317)
.++..++.|+|+|=+|--. ..+ .++.+.+ .+.+..+++|+.--+. +++-+.+.+.++.+.. .+++.+=+-+.
T Consensus 84 ll~~~~~~~~~yiDvEl~~-~~~---~~~~~~~~~~~~~kiI~S~H~f~~--tp~~~~~~~~~~~~~~-~gaDivKia~~ 156 (523)
T 2o7s_A 84 VLRLAMELGADYIDVELQV-ASE---FIKSIDGKKPGKFKVIVSSHNYQN--TPSVEDLDGLVARIQQ-TGADIVKIATT 156 (523)
T ss_dssp HHHHHHHHTCSEEEEEHHH-HHH---HHHHTTTCCCTTCEEEEEEECSSC--CCCHHHHHHHHHHHHT-TTCSEEEEEEE
T ss_pred HHHHHHHhCCCEEEEECCC-chH---HHHHHHHhccCCCEEEEEcccCCC--CcCHHHHHHHHHHHHH-hCCCEEEEEec
Confidence 3444555689999999421 112 2222222 1124779999953221 2222234444444443 46666555553
Q ss_pred --ChhhhHHHHHHHHhhCCCcEEEEeCC
Q 021144 252 --SPRFIHGLILSVRKVTSKPVIIYPNS 277 (317)
Q Consensus 252 --~p~~~~~~l~~l~~~~~~pl~vyPNa 277 (317)
+++....+++...+ .+.|+++|.-+
T Consensus 157 a~~~~D~~~l~~~~~~-~~~p~i~~~MG 183 (523)
T 2o7s_A 157 AVDIADVARMFHITSK-AQVPTIGLVMG 183 (523)
T ss_dssp CSSGGGHHHHHHHHHH-CSSCEEEEEES
T ss_pred CCCHHHHHHHHHHHhh-cCCCEEEEEcC
Confidence 57777777775544 37898877653
No 425
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=31.81 E-value=27 Score=31.68 Aligned_cols=59 Identities=15% Similarity=0.076 Sum_probs=20.6
Q ss_pred hCCCCEEEeccCCCHHHHHHHHHHHHHhC---CCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcC
Q 021144 179 NSGADLIAFETIPNKLEAKAYAELLEEEG---ITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINC 250 (317)
Q Consensus 179 ~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~---~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC 250 (317)
++|+|+|.+-|+. +++++.+++.++..+ ++.|+.+|- |-+++.+.+.+. .+++.||+--
T Consensus 217 ~aGaD~I~ld~~~-~~~l~~~v~~l~~~~~g~~~v~I~ASG----------GIt~~ni~~~~~--~GvD~i~vGs 278 (294)
T 3c2e_A 217 EAGADVIMLDNFK-GDGLKMCAQSLKNKWNGKKHFLLECSG----------GLNLDNLEEYLC--DDIDIYSTSS 278 (294)
T ss_dssp HHTCSEEECCC----------------------CCEEEEEC----------CCCC------CC--CSCSEEECGG
T ss_pred HcCCCEEEECCCC-HHHHHHHHHHhcccccCCCCeEEEEEC----------CCCHHHHHHHHH--cCCCEEEEec
Confidence 3578888887754 566666665554320 125555443 334444444433 4677777643
No 426
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=31.76 E-value=80 Score=28.02 Aligned_cols=45 Identities=22% Similarity=0.268 Sum_probs=33.3
Q ss_pred HHHHHHHHHHhCCCCEEEecc--CCCHHHHHHHHHHHHHhCCCccEEEEE
Q 021144 169 FHRRRVLILANSGADLIAFET--IPNKLEAKAYAELLEEEGITIPAWFSF 216 (317)
Q Consensus 169 ~h~~qi~~l~~~gvD~l~~ET--~p~~~Ea~a~~~~~~~~~~~~pv~iSf 216 (317)
.|.+.+..++++|..++ +|. -.+..|++.+++++++.+ +.+++.+
T Consensus 77 ~h~~~~~~al~~G~~v~-~eKP~~~~~~~~~~l~~~a~~~g--~~~~~~~ 123 (319)
T 1tlt_A 77 SHFDVVSTLLNAGVHVC-VDKPLAENLRDAERLVELAARKK--LTLMVGF 123 (319)
T ss_dssp HHHHHHHHHHHTTCEEE-EESSSCSSHHHHHHHHHHHHHTT--CCEEEEC
T ss_pred hHHHHHHHHHHcCCeEE-EeCCCCCCHHHHHHHHHHHHHcC--CeEEEee
Confidence 46777777888898766 583 347999999999888865 5666554
No 427
>1xim_A D-xylose isomerase; isomerase(intramolecular oxidoreductse); HET: XYL; 2.20A {Actinoplanes missouriensis} SCOP: c.1.15.3 PDB: 4xim_A 5xim_A* 6xim_A* 7xim_A 8xim_A* 9xim_A* 3xin_A 2xim_A* 5xin_A* 1xin_A* 1bhw_A* 2xin_A* 3xim_A*
Probab=31.59 E-value=1.3e+02 Score=27.84 Aligned_cols=71 Identities=20% Similarity=0.171 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHhC--CCCEEEeccCCC-------HHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHH
Q 021144 165 TLKEFHRRRVLILANS--GADLIAFETIPN-------KLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECAS 235 (317)
Q Consensus 165 el~~~h~~qi~~l~~~--gvD~l~~ET~p~-------~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~ 235 (317)
.+.+..++.++...+. ||. |++|+.+. +.....+.+.+++.+ .|-.+.++++-......|.++.+.+.
T Consensus 156 ~~~e~L~~l~~~A~~~g~gv~-l~lE~~~~~~~~~~~~~t~~~~~~ll~~v~--~~~~vgl~lD~gH~~~~g~d~~~~l~ 232 (393)
T 1xim_A 156 RYREALNLLAQYSEDRGYGLR-FAIEPKPNEPRGDILLPTAGHAIAFVQELE--RPELFGINPETGHEQMSNLNFTQGIA 232 (393)
T ss_dssp HHHHHHHHHHHHHHHHTCCCE-EEEECCSSSSSSEESSCSHHHHHHHHTTSS--SGGGEEECCBHHHHHTTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCcE-EEEecCCCCCCCCCcCCCHHHHHHHHHHhC--CccceEEEEccCCccccCCCHHHHHH
Confidence 3444444444444444 775 56698862 122333444555544 34213443333223367888888877
Q ss_pred Hhh
Q 021144 236 IAD 238 (317)
Q Consensus 236 ~~~ 238 (317)
.+.
T Consensus 233 ~~~ 235 (393)
T 1xim_A 233 QAL 235 (393)
T ss_dssp HHH
T ss_pred Hhh
Confidence 663
No 428
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=31.55 E-value=67 Score=29.80 Aligned_cols=45 Identities=18% Similarity=0.307 Sum_probs=31.6
Q ss_pred HHHHHHHHHHhCCCCEEEec--cCCCHHHHHHHHHHHHHhCCCccEEEEE
Q 021144 169 FHRRRVLILANSGADLIAFE--TIPNKLEAKAYAELLEEEGITIPAWFSF 216 (317)
Q Consensus 169 ~h~~qi~~l~~~gvD~l~~E--T~p~~~Ea~a~~~~~~~~~~~~pv~iSf 216 (317)
.|.+.+...+++|.++|+ | --.+++|++.+++++++.+ +.+.+.+
T Consensus 108 ~H~~~~~~al~aGkhVl~-EKP~a~~~~ea~~l~~~a~~~g--~~~~v~~ 154 (412)
T 4gqa_A 108 LHYTMAMAAIAAGKHVYC-EKPLAVNEQQAQEMAQAARRAG--VKTMVAF 154 (412)
T ss_dssp GHHHHHHHHHHTTCEEEE-ESCSCSSHHHHHHHHHHHHHHT--CCEEEEC
T ss_pred HHHHHHHHHHHcCCCeEe-ecCCcCCHHHHHHHHHHHHHhC--Ceeeecc
Confidence 577888888888887654 7 2347888888888877754 4454444
No 429
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=31.37 E-value=1e+02 Score=24.23 Aligned_cols=59 Identities=14% Similarity=0.160 Sum_probs=36.4
Q ss_pred CCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCCCh
Q 021144 181 GADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSP 253 (317)
Q Consensus 181 gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~~p 253 (317)
.+|++++= +|. ..+..+++.+.+.+ .+.++ +. .|..-.++++.+.+ .++..+|=||.+-
T Consensus 77 ~vDlvvi~-vp~-~~~~~vv~~~~~~g--i~~i~---~~------~g~~~~~l~~~a~~-~Gi~vvGpnc~gv 135 (144)
T 2d59_A 77 KIEVVDLF-VKP-KLTMEYVEQAIKKG--AKVVW---FQ------YNTYNREASKKADE-AGLIIVANRCMMR 135 (144)
T ss_dssp CCSEEEEC-SCH-HHHHHHHHHHHHHT--CSEEE---EC------TTCCCHHHHHHHHH-TTCEEEESCCHHH
T ss_pred CCCEEEEE-eCH-HHHHHHHHHHHHcC--CCEEE---EC------CCchHHHHHHHHHH-cCCEEEcCCchhh
Confidence 69998874 454 55666665555555 34332 21 13233566666665 5888999999753
No 430
>1zu4_A FTSY; GTPase, signal recognition particle, SRP, receptor, protein transport; 1.95A {Mycoplasma mycoides} PDB: 1zu5_A
Probab=31.34 E-value=2.9e+02 Score=24.80 Aligned_cols=116 Identities=10% Similarity=0.156 Sum_probs=55.5
Q ss_pred HHHHHhCCCCEEEeccCCCHH-------HHHHHHHHHHHhCCCccEEEEEEEcCCCcccCC-CcHHHHHHHhhcCCCceE
Q 021144 174 VLILANSGADLIAFETIPNKL-------EAKAYAELLEEEGITIPAWFSFNSKDGINVVSG-DSILECASIADSCEQVVA 245 (317)
Q Consensus 174 i~~l~~~gvD~l~~ET~p~~~-------Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G-~~l~~a~~~~~~~~~~~a 245 (317)
+......+.|++++-|-|.+. |+.++.+++....+..|--+-+.++.. .| ..+.++ +.+....++.+
T Consensus 184 l~~~~~~~yD~VIIDTpg~l~~~~~l~~eL~~~~~vi~~~~p~~~d~vllVl~a~----~~~~~l~~~-~~~~~~~~i~G 258 (320)
T 1zu4_A 184 IKKAKEQNYDLLLIDTAGRLQNKTNLMAELEKMNKIIQQVEKSAPHEVLLVIDAT----TGQNGVIQA-EEFSKVADVSG 258 (320)
T ss_dssp HHHHHHTTCSEEEEECCCCGGGHHHHHHHHHHHHHHHHTTCTTCCSEEEEEEEGG----GTHHHHHHH-HHHTTTSCCCE
T ss_pred HHHHHhcCCCEEEEcCCCcccccHHHHHHHHHHHHHHhcccCCCCceEEEEEECC----CcHHHHHHH-HHHhhcCCCcE
Confidence 333345689999999998754 333333333322122343322333221 12 122322 33343346778
Q ss_pred EEEcCCChhhhHHHHHHHHhhCCCcEEEEeCCCCccccccccccccCCCChhhHHHH
Q 021144 246 VGINCTSPRFIHGLILSVRKVTSKPVIIYPNSGETYNAELKKWVVSFSLHFFPLELI 302 (317)
Q Consensus 246 iGvNC~~p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~w~~~~~~~~~~~~~~ 302 (317)
+=+|-..+..-...+..+...++.|+. |--.|+.+|.- ...+|+.|++.
T Consensus 259 vVltk~d~~~~~g~~~~~~~~~~~Pi~-~i~~Ge~~~dl-------~~~~~~~~~~~ 307 (320)
T 1zu4_A 259 IILTKMDSTSKGGIGLAIKELLNIPIK-MIGVGEKVDDL-------LAFDIDQYIVH 307 (320)
T ss_dssp EEEECGGGCSCTTHHHHHHHHHCCCEE-EEECSSSTTCE-------EECCHHHHHHH
T ss_pred EEEeCCCCCCchhHHHHHHHHHCcCEE-EEeCCCCcccc-------ccCCHHHHHHH
Confidence 888875331111223334444578974 44556544331 12456666653
No 431
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=31.21 E-value=90 Score=24.21 Aligned_cols=57 Identities=16% Similarity=0.122 Sum_probs=35.2
Q ss_pred CCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCCCh
Q 021144 182 ADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSP 253 (317)
Q Consensus 182 vD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~~p 253 (317)
+|+..+=+ ..+.+..+++-+.+.+.. -+|++ .|..=+++++.+++ .++..+| ||...
T Consensus 59 vDlavi~~--p~~~v~~~v~e~~~~g~k-~v~~~----------~G~~~~e~~~~a~~-~Girvv~-nC~gv 115 (122)
T 3ff4_A 59 VDTVTLYI--NPQNQLSEYNYILSLKPK-RVIFN----------PGTENEELEEILSE-NGIEPVI-GCTLV 115 (122)
T ss_dssp CCEEEECS--CHHHHGGGHHHHHHHCCS-EEEEC----------TTCCCHHHHHHHHH-TTCEEEE-SCHHH
T ss_pred CCEEEEEe--CHHHHHHHHHHHHhcCCC-EEEEC----------CCCChHHHHHHHHH-cCCeEEC-CcCeE
Confidence 89988765 344555666656666633 36643 12222567777765 5888899 99753
No 432
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=31.10 E-value=4e+02 Score=26.69 Aligned_cols=111 Identities=17% Similarity=0.140 Sum_probs=63.8
Q ss_pred CCCHHHH---HHHHHHHHHHHHhCCCCEEEecc-C---------C-----------C-HHH---HHHHHHHHHHh-CCCc
Q 021144 160 AVSLETL---KEFHRRRVLILANSGADLIAFET-I---------P-----------N-KLE---AKAYAELLEEE-GITI 210 (317)
Q Consensus 160 ~~s~~el---~~~h~~qi~~l~~~gvD~l~~ET-~---------p-----------~-~~E---a~a~~~~~~~~-~~~~ 210 (317)
.++.+|+ .+.|.+-++...++|.|.|=+=- - | + ... +..+++++++. +.+.
T Consensus 138 ~~t~~eI~~~i~~f~~aA~~a~~aGfDgVEih~a~gyLl~qFlsp~~N~R~D~yGGs~enR~r~~~eiv~avr~~vg~~~ 217 (729)
T 1o94_A 138 EMDLSDIAQVQQFYVDAAKRSRDAGFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGGSLENRARFWLETLEKVKHAVGSDC 217 (729)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTTS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHhcCCccCCCcCcCCCCHHHHhHHHHHHHHHHHHHhCCCc
Confidence 3666664 45777777777789999984321 0 1 1 111 44455666653 4578
Q ss_pred cEEEEEEEcCCCcccCCCc----HHHHHHHhhcCCCceEEEEcCCC---------hh------hhHHHHHHHHhhCCCcE
Q 021144 211 PAWFSFNSKDGINVVSGDS----ILECASIADSCEQVVAVGINCTS---------PR------FIHGLILSVRKVTSKPV 271 (317)
Q Consensus 211 pv~iSf~~~~~~~l~~G~~----l~~a~~~~~~~~~~~aiGvNC~~---------p~------~~~~~l~~l~~~~~~pl 271 (317)
||++-++..+... ..|.+ ..+.++.+.+ .++++.+...+ |. .-..+++.+++..+.|+
T Consensus 218 pv~vrls~~~~~~-~~G~~~~~~~~~~~~~l~~--~~d~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pv 294 (729)
T 1o94_A 218 AIATRFGVDTVYG-PGQIEAEVDGQKFVEMADS--LVDMWDITIGDIAEWGEDAGPSRFYQQGHTIPWVKLVKQVSKKPV 294 (729)
T ss_dssp EEEEEEEEECSSC-TTSCCTTTHHHHHHHHHGG--GCSEEEEEECCSTTGGGTSCCTTTCCTTTTHHHHHHHHTTCSSCE
T ss_pred eEEEEEccccCcC-CCCCCchHHHHHHHHHHHh--hcCEEEEeeecccccccccCCccccCccccHHHHHHHHHHCCCEE
Confidence 9999998754210 12333 3345555554 46766665431 11 12567778888888896
Q ss_pred EE
Q 021144 272 II 273 (317)
Q Consensus 272 ~v 273 (317)
++
T Consensus 295 i~ 296 (729)
T 1o94_A 295 LG 296 (729)
T ss_dssp EC
T ss_pred EE
Confidence 53
No 433
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=31.07 E-value=2.1e+02 Score=26.16 Aligned_cols=77 Identities=12% Similarity=0.173 Sum_probs=40.9
Q ss_pred CCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCCChhhhHHHHHHHHhhCCCc
Q 021144 191 PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPRFIHGLILSVRKVTSKP 270 (317)
Q Consensus 191 p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~~p~~~~~~l~~l~~~~~~p 270 (317)
||..-=...-.+++..| ..++.+.|+- +..+.-|+++.|.++.+.. . +++|.+-.... ..++.+.+..+.|
T Consensus 54 ~STRTR~SFE~A~~~LG-g~~i~~~l~~--~ss~~kgEsl~DTarvls~-~-~D~iviR~~~~----~~~~~lA~~~~vP 124 (328)
T 3grf_A 54 PSLRTRVSLETAMTRLG-GHAIYYELGA--NSNVGGKETVQDTAEVFSR-M-VDICTARLATK----EMMREMAQHASVP 124 (328)
T ss_dssp CCHHHHHHHHHHHHHHT-CEEEEEEC------------CHHHHHHHHTT-T-CSEEEEECSSH----HHHHHHHHHCSSC
T ss_pred CCchHHHHHHHHHHHCC-CeEEccccCc--cccCCCCCCHHHHHHHHHh-h-CCEEEEecCCh----hHHHHHHHhCCCC
Confidence 56665444444566666 3444422332 3456679999999988864 3 68888877653 3455566667788
Q ss_pred EEEEeCCCC
Q 021144 271 VIIYPNSGE 279 (317)
Q Consensus 271 l~vyPNaG~ 279 (317)
+ -|+|.
T Consensus 125 V---INag~ 130 (328)
T 3grf_A 125 C---INALD 130 (328)
T ss_dssp E---EESSC
T ss_pred E---EeCCC
Confidence 6 37663
No 434
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=31.00 E-value=1.6e+02 Score=25.33 Aligned_cols=24 Identities=21% Similarity=0.282 Sum_probs=17.7
Q ss_pred hhhhHHHHHHHHhhCCCcEEE--EeC
Q 021144 253 PRFIHGLILSVRKVTSKPVII--YPN 276 (317)
Q Consensus 253 p~~~~~~l~~l~~~~~~pl~v--yPN 276 (317)
++.....++.+++.++.|+++ |.|
T Consensus 79 ~~~~~~~i~~ir~~~~~Pv~~m~~~~ 104 (262)
T 1rd5_A 79 MDAVLEMLREVTPELSCPVVLLSYYK 104 (262)
T ss_dssp HHHHHHHHHHHGGGCSSCEEEECCSH
T ss_pred HHHHHHHHHHHHhcCCCCEEEEecCc
Confidence 345567788888888899876 566
No 435
>2p3e_A Diaminopimelate decarboxylase; southeast collaboratory for struct genomics, riken spring-8 center; 1.99A {Aquifex aeolicus}
Probab=30.92 E-value=2.6e+02 Score=25.83 Aligned_cols=71 Identities=20% Similarity=0.159 Sum_probs=40.4
Q ss_pred HHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcC---------CCc--ccCCCcHH---HHHHHhhcCCC
Q 021144 177 LANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKD---------GIN--VVSGDSIL---ECASIADSCEQ 242 (317)
Q Consensus 177 l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~---------~~~--l~~G~~l~---~a~~~~~~~~~ 242 (317)
+++.++..+.++ +.+|++.+.+++++.+...+|.+-+.... .|. .+-|-+.+ ++++.+....+
T Consensus 119 a~~~~i~~~~vd---s~~~l~~l~~~a~~~~~~~~v~lRvn~~~~~~~~~~idtG~~~~R~G~~~~e~~~~~~~~~~~~~ 195 (420)
T 2p3e_A 119 AVDSEILMFNVE---SRQELDVLNEIAGKLGKKARIAIRVNPDVDPKTHPYIATGMQKSKFGVDIREAQKEYEYASKLEN 195 (420)
T ss_dssp HHHTTCSEEEEC---CHHHHHHHHHHHHHHTCCEEEEEEEEC----------------CCSCEEGGGHHHHHHHHHTCTT
T ss_pred HHHcCCCEEEeC---CHHHHHHHHHHHHhcCCCCcEEEEECCCCCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHhCCC
Confidence 344666545444 78888888887776664456755554322 111 34565444 44555555457
Q ss_pred ceEEEEcC
Q 021144 243 VVAVGINC 250 (317)
Q Consensus 243 ~~aiGvNC 250 (317)
+...|+-|
T Consensus 196 l~l~Gl~~ 203 (420)
T 2p3e_A 196 LEIVGIHC 203 (420)
T ss_dssp EEEEEEEC
T ss_pred CCEEEEEE
Confidence 77778765
No 436
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=30.91 E-value=2.7e+02 Score=24.31 Aligned_cols=79 Identities=14% Similarity=0.128 Sum_probs=52.3
Q ss_pred HHHHHHhCCCCEEEec---cCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEc
Q 021144 173 RVLILANSGADLIAFE---TIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGIN 249 (317)
Q Consensus 173 qi~~l~~~gvD~l~~E---T~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvN 249 (317)
.++.+...|.|++++- ..++...+...+.+++..+ .++||-+. ...+ .++...++ .++++|.+-
T Consensus 29 ~~e~a~~~g~D~vilDlEhav~~~~k~~~~l~a~~~~~--~~~~VRVn--------~~~~-~di~~~ld--~G~~gI~lP 95 (261)
T 3qz6_A 29 IVRIYAEAGLDYFIVDCEHAAYTFREINHLVSVAKNAG--VSVLVRIP--------QVDR-AHVQRLLD--IGAEGFMIP 95 (261)
T ss_dssp HHHHHHHTTCSEEEEESSSSCCCHHHHHHHHHHHHHHT--CEEEEECS--------SCCH-HHHHHHHH--HTCCEEEET
T ss_pred HHHHHhcCCcCEEEEeccCCCCCHHHHHHHHHHHhhcC--CeEEEEeC--------CCCH-HHHHHHHh--cCCCEEEEC
Confidence 4566777899999974 5666777777777766544 66665441 1111 34444444 378888888
Q ss_pred CC-ChhhhHHHHHHHH
Q 021144 250 CT-SPRFIHGLILSVR 264 (317)
Q Consensus 250 C~-~p~~~~~~l~~l~ 264 (317)
-+ +++.+..+++.++
T Consensus 96 ~v~saed~~~~~~~~~ 111 (261)
T 3qz6_A 96 GVQSAETMRETVRLAK 111 (261)
T ss_dssp TCCSHHHHHHHHHHHS
T ss_pred CcCCHHHHHHHHHHhc
Confidence 76 7888888877663
No 437
>2yim_A Probable alpha-methylacyl-COA racemase MCR (2-methylacyl-COA racemase) (2-arylpropionyl-COA...; isomerase, methyl-COA racemase; HET: MC4; 1.41A {Mycobacterium tuberculosis} PDB: 2gce_A* 1x74_A* 2gd0_A* 2gd2_A* 2gd6_A* 2gci_A*
Probab=30.88 E-value=95 Score=28.83 Aligned_cols=41 Identities=22% Similarity=0.118 Sum_probs=28.0
Q ss_pred ccCCChHHHHHHHHHHHHhhccccccccccccHHHHHhCCCCHHHH
Q 021144 49 CLVSSPHLVRKVHLDYLDAGANIIITASYQATIQGFEAKGFSTEEA 94 (317)
Q Consensus 49 ~ll~~Pe~V~~iH~~Yl~AGAdiI~TnTy~as~~~l~~~g~~~~~~ 94 (317)
+.+.+|+-.+.+++ |-+.|||+++|-= +..+.+.|++.+..
T Consensus 59 lDLk~~~gr~~l~~--Lv~~ADV~venfr---PG~~~rlGl~ye~L 99 (360)
T 2yim_A 59 ADLKSDQGLELALK--LIAKADVLIEGYR---PGVTERLGLGPEEC 99 (360)
T ss_dssp CCTTSHHHHHHHHH--HHTTCSEEEECSC---TTHHHHHTCSHHHH
T ss_pred EeCCCHHHHHHHHH--HHhhCCEEEEcCC---cchHhhcCCCHHHH
Confidence 45788886666555 4577999999853 34466669986543
No 438
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=30.68 E-value=2.1e+02 Score=25.66 Aligned_cols=156 Identities=12% Similarity=0.131 Sum_probs=87.4
Q ss_pred CCChHHHHHHHHHHHHhhccccccccccccHH-----HHHhC-CCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCC
Q 021144 51 VSSPHLVRKVHLDYLDAGANIIITASYQATIQ-----GFEAK-GFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFT 124 (317)
Q Consensus 51 l~~Pe~V~~iH~~Yl~AGAdiI~TnTy~as~~-----~l~~~-g~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~ 124 (317)
++++|...++-+.-.++|++++.--+|.+... ....+ |+.. ..+.+..++++++.
T Consensus 28 ~~~~e~a~~~a~~lk~~ga~~~~~~v~k~~f~k~prts~~sf~g~~l-------~~gl~~l~~~~~~~------------ 88 (292)
T 1o60_A 28 LESRDMAMQVCEAYVKVTEKLGVPYVFKASFDKANRSSIHSYRGPGM-------EEGLKIFQELKDTF------------ 88 (292)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTCCEEEEEESCCTTCSSTTSCCCSCH-------HHHHHHHHHHHHHH------------
T ss_pred ccCHHHHHHHHHHHHHHhhhhCEeEEEhhhcccCCCCChHHhhhhhH-------HHHHHHHHHHHHHc------------
Confidence 68899999999999999998776656653221 11001 2221 33444455555432
Q ss_pred CCCCCCCCCeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEecc--CCCHHHHHHHHHH
Q 021144 125 GSGRISSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFET--IPNKLEAKAYAEL 202 (317)
Q Consensus 125 ~~~~~~~~~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~ET--~p~~~Ea~a~~~~ 202 (317)
.+-++-+ |+ +. .+++.+.+ .||++-+-. +.+.. +++.
T Consensus 89 --------Glp~~te--~~------------------d~--------~~~~~l~~-~vd~~kIgA~~~~n~~----Ll~~ 127 (292)
T 1o60_A 89 --------GVKIITD--VH------------------EI--------YQCQPVAD-VVDIIQLPAFLARQTD----LVEA 127 (292)
T ss_dssp --------CCEEEEE--CC------------------SG--------GGHHHHHT-TCSEEEECGGGTTCHH----HHHH
T ss_pred --------CCcEEEe--cC------------------CH--------HHHHHHHh-cCCEEEECcccccCHH----HHHH
Confidence 1222221 11 11 13555665 799998765 34443 4444
Q ss_pred HHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCCC---hh---hhHHHHHHHHhhC-CCcEEE
Q 021144 203 LEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTS---PR---FIHGLILSVRKVT-SKPVII 273 (317)
Q Consensus 203 ~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~~---p~---~~~~~l~~l~~~~-~~pl~v 273 (317)
+.+. ++||.++- |.-.+=..+..|++.+....+...+-+-|+. +. .=...+..+++.. ..|+++
T Consensus 128 ~a~~--~kPV~lk~-----G~~~t~~ei~~Av~~i~~~Gn~~i~L~~rg~~~~y~~~~~dl~~i~~lk~~~~~~pV~~ 198 (292)
T 1o60_A 128 MAKT--GAVINVKK-----PQFLSPSQMGNIVEKIEECGNDKIILCDRGTNFGYDNLIVDMLGFSVMKKASKGSPVIF 198 (292)
T ss_dssp HHHT--TCEEEEEC-----CTTSCGGGHHHHHHHHHHTTCCCEEEEECCEECSTTCEECCTTHHHHHHHHTTSCCEEE
T ss_pred HHcC--CCcEEEeC-----CCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCccccCHHHHHHHHhhCCCCCEEE
Confidence 4444 49999764 2111122566777777655556788888863 21 1234556677776 688877
No 439
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=30.57 E-value=79 Score=28.76 Aligned_cols=45 Identities=13% Similarity=0.240 Sum_probs=34.2
Q ss_pred HHHHHHHHHHhCCCCEEEecc--CCCHHHHHHHHHHHHHhCCCccEEEEE
Q 021144 169 FHRRRVLILANSGADLIAFET--IPNKLEAKAYAELLEEEGITIPAWFSF 216 (317)
Q Consensus 169 ~h~~qi~~l~~~gvD~l~~ET--~p~~~Ea~a~~~~~~~~~~~~pv~iSf 216 (317)
.|.+.+..++++|.++|. |- -.++.|++.+++++++.+ +++.+.+
T Consensus 77 ~H~~~~~~al~aGkhVl~-EKPla~~~~e~~~l~~~a~~~g--~~~~v~~ 123 (358)
T 3gdo_A 77 LHYEHTMACIQAGKHVVM-EKPMTATAEEGETLKRAADEKG--VLLSVYH 123 (358)
T ss_dssp THHHHHHHHHHTTCEEEE-ESSCCSSHHHHHHHHHHHHHHT--CCEEEEC
T ss_pred HHHHHHHHHHHcCCeEEE-ecCCcCCHHHHHHHHHHHHHcC--CeEEEee
Confidence 377788888889987765 84 457999999999888865 6666655
No 440
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=30.51 E-value=3e+02 Score=25.33 Aligned_cols=93 Identities=10% Similarity=0.070 Sum_probs=53.9
Q ss_pred HHHHHHHHhCCCCEEEeccCCC-HHHHHHHHHHHHH-hCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhc--CCCceEE
Q 021144 171 RRRVLILANSGADLIAFETIPN-KLEAKAYAELLEE-EGITIPAWFSFNSKDGINVVSGDSILECASIADS--CEQVVAV 246 (317)
Q Consensus 171 ~~qi~~l~~~gvD~l~~ET~p~-~~Ea~a~~~~~~~-~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~--~~~~~ai 246 (317)
.++++.+.+.|.|.|=+=.-.+ .++...+++++++ .+++.|+.+-. + .|-+++++++.+.. ..+++.|
T Consensus 154 ~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~a~G~d~~l~vDa----n----~~~~~~~a~~~~~~l~~~~i~~i 225 (391)
T 2qgy_A 154 LRQIEKFYGKKYGGIKIYPMLDSLSISIQFVEKVREIVGDELPLMLDL----A----VPEDLDQTKSFLKEVSSFNPYWI 225 (391)
T ss_dssp HHHHHHHHHTTCSCEEECCCCSSHHHHHHHHHHHHHHHCSSSCEEEEC----C----CCSCHHHHHHHHHHHGGGCCSEE
T ss_pred HHHHHHHHHcCCCEEEEccCCChHHHHHHHHHHHHHHhCCCCEEEEEc----C----CCCCHHHHHHHHHHHHhcCCCeE
Confidence 3455556677888775432123 5777778888887 45567777543 2 35677877766542 1344444
Q ss_pred EEcCCChhhhHHHHHHHHhhCCCcEEE
Q 021144 247 GINCTSPRFIHGLILSVRKVTSKPVII 273 (317)
Q Consensus 247 GvNC~~p~~~~~~l~~l~~~~~~pl~v 273 (317)
=--| .+.. ...++.+++.++.|++.
T Consensus 226 EqP~-~~~d-~~~~~~l~~~~~iPIa~ 250 (391)
T 2qgy_A 226 EEPV-DGEN-ISLLTEIKNTFNMKVVT 250 (391)
T ss_dssp ECSS-CTTC-HHHHHHHHHHCSSCEEE
T ss_pred eCCC-Chhh-HHHHHHHHhhCCCCEEE
Confidence 3222 2222 34556677777788754
No 441
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=30.49 E-value=3e+02 Score=24.69 Aligned_cols=140 Identities=14% Similarity=0.081 Sum_probs=78.5
Q ss_pred ChHHHHHHHHHHHHhhccccc-cccccccHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCC
Q 021144 53 SPHLVRKVHLDYLDAGANIII-TASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (317)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~-TnTy~as~~~l~~~g~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (317)
+.+.+++.-+.++++|++-|. .-|-+=. .-++.+|-.++++.+++.+. +
T Consensus 26 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~------~~Ls~~Er~~v~~~~~~~~~------------------------g 75 (311)
T 3h5d_A 26 NFDAIPALIEHLLAHHTDGILLAGTTAES------PTLTHDEELELFAAVQKVVN------------------------G 75 (311)
T ss_dssp CTTHHHHHHHHHHHTTCCCEEESSTTTTG------GGSCHHHHHHHHHHHHHHSC------------------------S
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCh------hhCCHHHHHHHHHHHHHHhC------------------------C
Confidence 346778877888899999544 3343311 12455666677666654431 2
Q ss_pred CCeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCC-CEEEecc----CCCHHHHHHHHHHHHHh
Q 021144 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGA-DLIAFET----IPNKLEAKAYAELLEEE 206 (317)
Q Consensus 132 ~~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gv-D~l~~ET----~p~~~Ea~a~~~~~~~~ 206 (317)
+-..|+| +|.. +.++..+ +++...+.|+ |.+++=+ -|+.+++..-.+.+.+.
T Consensus 76 rvpViaG-vg~~------------------~t~~ai~----la~~A~~~Ga~davlv~~P~y~~~s~~~l~~~f~~va~a 132 (311)
T 3h5d_A 76 RVPLIAG-VGTN------------------DTRDSIE----FVKEVAEFGGFAAGLAIVPYYNKPSQEGMYQHFKAIADA 132 (311)
T ss_dssp SSCEEEE-CCCS------------------SHHHHHH----HHHHHHHSCCCSEEEEECCCSSCCCHHHHHHHHHHHHHS
T ss_pred CCcEEEe-CCCc------------------CHHHHHH----HHHHHHhcCCCcEEEEcCCCCCCCCHHHHHHHHHHHHHh
Confidence 3346666 3321 3444433 5566677786 9987764 24667776666666654
Q ss_pred CCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCCC
Q 021144 207 GITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTS 252 (317)
Q Consensus 207 ~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~~ 252 (317)
. ++|+++== + .+++.-.-+++...+.. +.+ ..+||-.++
T Consensus 133 ~-~lPiilYn-~--P~~tg~~l~~~~~~~La-~~p--nIvgiKdss 171 (311)
T 3h5d_A 133 S-DLPIIIYN-I--PGRVVVELTPETMLRLA-DHP--NIIGVKECT 171 (311)
T ss_dssp C-SSCEEEEE-C--HHHHSSCCCHHHHHHHH-TST--TEEEEEECS
T ss_pred C-CCCEEEEe-c--ccccCCCCCHHHHHHHh-cCC--CEEEEEeCC
Confidence 3 69998432 1 12222223444444444 333 466776665
No 442
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=30.39 E-value=1.3e+02 Score=25.56 Aligned_cols=99 Identities=13% Similarity=0.133 Sum_probs=51.7
Q ss_pred HHHHHHHhCCCCEEEeccC-----CCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEE
Q 021144 172 RRVLILANSGADLIAFETI-----PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAV 246 (317)
Q Consensus 172 ~qi~~l~~~gvD~l~~ET~-----p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~ai 246 (317)
+.++.+.++|+|.|-+=++ +.... ..++.+++.. ++|+++..- + .++.++-..+. .+++.|
T Consensus 36 ~~a~~~~~~Gad~i~v~~~d~~~~~~~~~--~~i~~i~~~~-~ipv~v~gg------I---~~~~~~~~~l~--~Gad~V 101 (244)
T 1vzw_A 36 EAALAWQRSGAEWLHLVDLDAAFGTGDNR--ALIAEVAQAM-DIKVELSGG------I---RDDDTLAAALA--TGCTRV 101 (244)
T ss_dssp HHHHHHHHTTCSEEEEEEHHHHHTSCCCH--HHHHHHHHHC-SSEEEEESS------C---CSHHHHHHHHH--TTCSEE
T ss_pred HHHHHHHHcCCCEEEEecCchhhcCCChH--HHHHHHHHhc-CCcEEEECC------c---CCHHHHHHHHH--cCCCEE
Confidence 3456777899999976432 22222 2333344433 589887421 2 23455444444 367777
Q ss_pred EEcCC---ChhhhHHHHHHHHhhCCCcEEEEeCCCCcccccccccc
Q 021144 247 GINCT---SPRFIHGLILSVRKVTSKPVIIYPNSGETYNAELKKWV 289 (317)
Q Consensus 247 GvNC~---~p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~w~ 289 (317)
.+... .|+.+..+++.+.. +.-+.+-+..|.. ..+.|.
T Consensus 102 ~lg~~~l~~p~~~~~~~~~~g~--~~~~~l~~~~g~v---~~~g~~ 142 (244)
T 1vzw_A 102 NLGTAALETPEWVAKVIAEHGD--KIAVGLDVRGTTL---RGRGWT 142 (244)
T ss_dssp EECHHHHHCHHHHHHHHHHHGG--GEEEEEEEETTEE---CCSSSC
T ss_pred EECchHhhCHHHHHHHHHHcCC--cEEEEEEccCCEE---EEcCcc
Confidence 66653 46666666665432 2234455544533 235664
No 443
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=30.26 E-value=1.9e+02 Score=24.17 Aligned_cols=89 Identities=13% Similarity=0.020 Sum_probs=53.0
Q ss_pred HHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCCCh
Q 021144 174 VLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSP 253 (317)
Q Consensus 174 i~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~~p 253 (317)
++.+ +.|+|++=+-+.+++.....+++.+++..++.|+++-+.+.+.+ ...++.+.+ .+++.+-+-+..+
T Consensus 25 ~~~~-~~~vd~ie~g~~~~~~~G~~~i~~lr~~~~~~~i~ld~~l~d~p--------~~~~~~~~~-aGad~i~vh~~~~ 94 (218)
T 3jr2_A 25 ASNV-ASYVDVIEVGTILAFAEGMKAVSTLRHNHPNHILVCDMKTTDGG--------AILSRMAFE-AGADWITVSAAAH 94 (218)
T ss_dssp HHHH-GGGCSEEEECHHHHHHHTTHHHHHHHHHCTTSEEEEEEEECSCH--------HHHHHHHHH-HTCSEEEEETTSC
T ss_pred HHHh-cCCceEEEeCcHHHHhcCHHHHHHHHHhCCCCcEEEEEeecccH--------HHHHHHHHh-cCCCEEEEecCCC
Confidence 3444 46899985555556667677788888763357888766554321 223333333 3677877777654
Q ss_pred -hhhHHHHHHHHhhCCCcEEE
Q 021144 254 -RFIHGLILSVRKVTSKPVII 273 (317)
Q Consensus 254 -~~~~~~l~~l~~~~~~pl~v 273 (317)
+.+..+++.+++. +...++
T Consensus 95 ~~~~~~~~~~~~~~-g~~~~~ 114 (218)
T 3jr2_A 95 IATIAACKKVADEL-NGEIQI 114 (218)
T ss_dssp HHHHHHHHHHHHHH-TCEEEE
T ss_pred HHHHHHHHHHHHHh-CCccce
Confidence 4456677766654 344443
No 444
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=30.09 E-value=78 Score=28.44 Aligned_cols=45 Identities=7% Similarity=-0.026 Sum_probs=33.8
Q ss_pred HHHHHHHHHHhCCCCEEEec--cCCCHHHHHHHHHHHHHhCCCcc--EEEEE
Q 021144 169 FHRRRVLILANSGADLIAFE--TIPNKLEAKAYAELLEEEGITIP--AWFSF 216 (317)
Q Consensus 169 ~h~~qi~~l~~~gvD~l~~E--T~p~~~Ea~a~~~~~~~~~~~~p--v~iSf 216 (317)
.|.+.+...+++|.++| +| --.+++|++.+++++++.+ ++ +++.|
T Consensus 79 ~H~~~~~~al~aGkhVl-~EKPla~~~~ea~~l~~~a~~~g--~~~~~~v~~ 127 (337)
T 3ip3_A 79 LNGKILLEALERKIHAF-VEKPIATTFEDLEKIRSVYQKVR--NEVFFTAMF 127 (337)
T ss_dssp HHHHHHHHHHHTTCEEE-ECSSSCSSHHHHHHHHHHHHHHT--TTCCEEECC
T ss_pred hHHHHHHHHHHCCCcEE-EeCCCCCCHHHHHHHHHHHHHhC--CceEEEecc
Confidence 58888888888998855 57 2347889999999988876 66 45544
No 445
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=30.03 E-value=84 Score=28.29 Aligned_cols=45 Identities=16% Similarity=0.171 Sum_probs=33.0
Q ss_pred HHHHHHHHHHhCCCCEEEecc--CCCHHHHHHHHHHHHHhCCCccEEEEE
Q 021144 169 FHRRRVLILANSGADLIAFET--IPNKLEAKAYAELLEEEGITIPAWFSF 216 (317)
Q Consensus 169 ~h~~qi~~l~~~gvD~l~~ET--~p~~~Ea~a~~~~~~~~~~~~pv~iSf 216 (317)
.|.+.+..++++|.+++ +|. -.++.|++.+++++++.+ +.+++.+
T Consensus 76 ~h~~~~~~al~~gk~v~-~EKP~~~~~~e~~~l~~~a~~~g--~~~~v~~ 122 (344)
T 3ezy_A 76 THSELVIACAKAKKHVF-CEKPLSLNLADVDRMIEETKKAD--VILFTGF 122 (344)
T ss_dssp GHHHHHHHHHHTTCEEE-EESCSCSCHHHHHHHHHHHHHHT--CCEEEEC
T ss_pred chHHHHHHHHhcCCeEE-EECCCCCCHHHHHHHHHHHHHhC--CcEEEee
Confidence 36677777888898866 584 467899999998888765 5555555
No 446
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=29.95 E-value=73 Score=28.54 Aligned_cols=45 Identities=16% Similarity=0.134 Sum_probs=29.3
Q ss_pred HHHHHHHHHHhCCCCEEEecc--CCCHHHHHHHHHHHHHhCCCccEEEEE
Q 021144 169 FHRRRVLILANSGADLIAFET--IPNKLEAKAYAELLEEEGITIPAWFSF 216 (317)
Q Consensus 169 ~h~~qi~~l~~~gvD~l~~ET--~p~~~Ea~a~~~~~~~~~~~~pv~iSf 216 (317)
.|.+.+...+++|.+++. |- -.++.|++.+++++++.+ +++++.+
T Consensus 78 ~h~~~~~~al~aGkhVl~-EKP~a~~~~e~~~l~~~a~~~g--~~~~v~~ 124 (336)
T 2p2s_A 78 DRAELALRTLDAGKDFFT-AKPPLTTLEQLDAVQRRVAETG--RKFAVYF 124 (336)
T ss_dssp GHHHHHHHHHHTTCEEEE-CSSCCSCHHHHHHHHHHHHHHC--CCEEECC
T ss_pred hHHHHHHHHHHCCCcEEE-eCCCCCCHHHHHHHHHHHHHcC--CEEEEee
Confidence 466677767777776554 73 346778888887777765 5555444
No 447
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=29.94 E-value=30 Score=30.00 Aligned_cols=26 Identities=19% Similarity=0.429 Sum_probs=23.6
Q ss_pred ChHHHHHHHHHHHHhhcccccccc-cc
Q 021144 53 SPHLVRKVHLDYLDAGANIIITAS-YQ 78 (317)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~TnT-y~ 78 (317)
.+|.|...-+-=.++|||+|-|+| |.
T Consensus 131 ~~e~i~~a~~ia~eaGADfVKTsTGf~ 157 (220)
T 1ub3_A 131 SPEEIARLAEAAIRGGADFLKTSTGFG 157 (220)
T ss_dssp CHHHHHHHHHHHHHHTCSEEECCCSSS
T ss_pred CHHHHHHHHHHHHHhCCCEEEeCCCCC
Confidence 478899999999999999999999 75
No 448
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=29.84 E-value=85 Score=29.20 Aligned_cols=77 Identities=14% Similarity=0.113 Sum_probs=49.7
Q ss_pred HHHHHHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhc--CCCceEE
Q 021144 169 FHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADS--CEQVVAV 246 (317)
Q Consensus 169 ~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~--~~~~~ai 246 (317)
.|.+.+..++++|..+|. |-=-+.+|++.+++++++.+ +++++.+...-. ..-..+.++++.+.. ...+..+
T Consensus 82 ~~~~~a~~al~aGkhVl~-EKPl~~~ea~~l~~~A~~~g--~~~~v~~~yr~~---p~vr~~i~~~~~l~~~~~~~~~~i 155 (372)
T 4gmf_A 82 AGTQLARHFLARGVHVIQ-EHPLHPDDISSLQTLAQEQG--CCYWINTFYPHT---RAGRTWLRDAQQLRRCLAKTPPVV 155 (372)
T ss_dssp HHHHHHHHHHHTTCEEEE-ESCCCHHHHHHHHHHHHHHT--CCEEEECSGGGS---HHHHHHHHHHHHHHHHHTSCCSEE
T ss_pred hHHHHHHHHHHcCCcEEE-ecCCCHHHHHHHHHHHHHcC--CEEEEcCcccCC---HHHHHHHHHHHHHHhhccCCceEE
Confidence 356778888889998775 74337899999999999987 888887643221 111123334444432 2345667
Q ss_pred EEcCC
Q 021144 247 GINCT 251 (317)
Q Consensus 247 GvNC~ 251 (317)
-+.|+
T Consensus 156 ~~~~s 160 (372)
T 4gmf_A 156 HATTS 160 (372)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 77776
No 449
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=29.82 E-value=2.4e+02 Score=25.88 Aligned_cols=85 Identities=7% Similarity=0.110 Sum_probs=50.3
Q ss_pred EEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEc--CCChhhhHHHHHH
Q 021144 185 IAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGIN--CTSPRFIHGLILS 262 (317)
Q Consensus 185 l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvN--C~~p~~~~~~l~~ 262 (317)
+.|=+.+-. =.-+++..+.+.+...-.+||. .+.-.-|.++.|+++.+.+.+...+|.+= --+... .++++.
T Consensus 171 vgivSqSG~-l~~~i~~~~~~~g~G~S~~Vsi----Gn~~~~d~~~~D~l~~~~~Dp~T~~I~l~gEi~g~~e-~~~~~~ 244 (334)
T 3mwd_B 171 VAYVSRSGG-MSNELNNIISRTTDGVYEGVAI----GGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEE-YKICRG 244 (334)
T ss_dssp EEEEESCHH-HHHHHHHHHHHHSSCEEEEEEC----CSSSSCSSCHHHHHHHHHTCTTCCEEEEEEESSSSHH-HHHHHH
T ss_pred EEEEeCchH-HHHHHHHHHHhcCCCeEEEEEC----CCCccCCCCHHHHHHHHhcCCCCCEEEEEEecCChHH-HHHHHH
Confidence 333344432 2334555566555223333333 33333688999999999776666666654 333333 677887
Q ss_pred HHhh-CCCcEEEEe
Q 021144 263 VRKV-TSKPVIIYP 275 (317)
Q Consensus 263 l~~~-~~~pl~vyP 275 (317)
+++. .+||+++|-
T Consensus 245 ~r~~~~~KPVV~~k 258 (334)
T 3mwd_B 245 IKEGRLTKPIVCWC 258 (334)
T ss_dssp HHTTSCCSCEEEEE
T ss_pred HHhhcCCCCEEEEE
Confidence 8763 479998884
No 450
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=29.68 E-value=83 Score=28.66 Aligned_cols=45 Identities=9% Similarity=0.065 Sum_probs=32.3
Q ss_pred HHHHHHHHHHhCCCCEEEec--cCCCHHHHHHHHHHHHHhCCCccEEEEE
Q 021144 169 FHRRRVLILANSGADLIAFE--TIPNKLEAKAYAELLEEEGITIPAWFSF 216 (317)
Q Consensus 169 ~h~~qi~~l~~~gvD~l~~E--T~p~~~Ea~a~~~~~~~~~~~~pv~iSf 216 (317)
.|.+.+..++++|..+| +| .-.+.+|++.+++++++.+ +++++.+
T Consensus 77 ~h~~~~~~al~aGkhVl-~EKP~a~~~~ea~~l~~~a~~~g--~~~~v~~ 123 (359)
T 3e18_A 77 SHKELAISALEAGKHVV-CEKPVTMTSEDLLAIMDVAKRVN--KHFMVHQ 123 (359)
T ss_dssp GHHHHHHHHHHTTCEEE-EESSCCSSHHHHHHHHHHHHHHT--CCEEEEC
T ss_pred HHHHHHHHHHHCCCCEE-eeCCCcCCHHHHHHHHHHHHHhC--CeEEEEe
Confidence 36777777888888766 57 3457889999988888765 5555544
No 451
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=29.58 E-value=72 Score=28.78 Aligned_cols=45 Identities=18% Similarity=0.172 Sum_probs=32.5
Q ss_pred HHHHHHHHHHhCCCCEEEecc--CCCHHHHHHHHHHHHHhCCCccEEEEE
Q 021144 169 FHRRRVLILANSGADLIAFET--IPNKLEAKAYAELLEEEGITIPAWFSF 216 (317)
Q Consensus 169 ~h~~qi~~l~~~gvD~l~~ET--~p~~~Ea~a~~~~~~~~~~~~pv~iSf 216 (317)
.|.+.+..++++|..+| +|- -.+.+|++.+++++++.+ +++++.+
T Consensus 77 ~h~~~~~~al~aGk~Vl-~EKP~a~~~~e~~~l~~~a~~~g--~~~~v~~ 123 (345)
T 3f4l_A 77 SHFEYAKRALEAGKNVL-VEKPFTPTLAQAKELFALAKSKG--LTVTPYQ 123 (345)
T ss_dssp GHHHHHHHHHHTTCEEE-ECSSSCSSHHHHHHHHHHHHHHT--CCEEECC
T ss_pred HHHHHHHHHHHcCCcEE-EeCCCCCCHHHHHHHHHHHHHcC--CeEEEEe
Confidence 36777777888887665 474 457889999888888765 5565544
No 452
>1q7e_A Hypothetical protein YFDW; structural genomics, intertwined dimer, PSI, protein structu initiative; HET: MSE; 1.60A {Escherichia coli} SCOP: c.123.1.1 PDB: 1pqy_A* 1q6y_A* 1pt7_A 1pt5_A 1pt8_A*
Probab=29.47 E-value=92 Score=29.73 Aligned_cols=41 Identities=15% Similarity=0.095 Sum_probs=22.4
Q ss_pred ccCCChHHHHHHHHHHHHhhccccccccccccHHHHHhCCCCHHHH
Q 021144 49 CLVSSPHLVRKVHLDYLDAGANIIITASYQATIQGFEAKGFSTEEA 94 (317)
Q Consensus 49 ~ll~~Pe~V~~iH~~Yl~AGAdiI~TnTy~as~~~l~~~g~~~~~~ 94 (317)
+.+.+|+-.+.+++ |-+.|||+++|-= +..+.+.|++.+..
T Consensus 74 LDLk~~eGr~~l~~--Lv~~ADVlienfr---PGv~~rlGL~ye~L 114 (428)
T 1q7e_A 74 LNTKTAEGKEVMEK--LIREADILVENFH---PGAIDHMGFTWEHI 114 (428)
T ss_dssp CCTTSHHHHHHHHH--HHHHCSEEEECCC---C-------CCHHHH
T ss_pred eeCCCHHHHHHHHH--HHhhCCEEEEcCC---cchHhhcCCCHHHH
Confidence 34677776555544 4566999999953 33456669986543
No 453
>2wlt_A L-asparaginase; hydrolase; 1.40A {Helicobacter pylori} PDB: 2wt4_A
Probab=29.39 E-value=1.1e+02 Score=28.14 Aligned_cols=49 Identities=14% Similarity=-0.046 Sum_probs=32.6
Q ss_pred HHHHHHHhCCCCEEEeccCCC---HHHHHHHHHHHHHhCCCccEEEEEEEcCCC
Q 021144 172 RRVLILANSGADLIAFETIPN---KLEAKAYAELLEEEGITIPAWFSFNSKDGI 222 (317)
Q Consensus 172 ~qi~~l~~~gvD~l~~ET~p~---~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~ 222 (317)
+.++.+++.|++.|++|++-. ..++..+++-+.+.+ +||+++-.|..+.
T Consensus 233 ~~l~~~~~~g~~GiVle~~G~Gn~p~~~~~~l~~a~~~G--i~VV~~Sr~~~G~ 284 (332)
T 2wlt_A 233 DLFQASLNSHAKGVVIAGVGNGNVSAGFLKAMQEASQMG--VVIVRSSRVGSGG 284 (332)
T ss_dssp HHHHHHHHTTCSEEEEEEBTTTBCCHHHHHHHHHHHHTT--CEEEEEESSSSSC
T ss_pred HHHHHHHhCCCCEEEEeeECCCCCCHHHHHHHHHHHHCC--CEEEEECCCCCCC
Confidence 356777788999999998764 234444444344444 8999888776543
No 454
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=29.29 E-value=1.7e+02 Score=25.07 Aligned_cols=87 Identities=11% Similarity=0.184 Sum_probs=53.0
Q ss_pred CCE--EEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCC-ChhhhHH
Q 021144 182 ADL--IAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCT-SPRFIHG 258 (317)
Q Consensus 182 vD~--l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~-~p~~~~~ 258 (317)
||+ +-++-| ...-..+++.+++.+ .++++-+-+.| .|.++...+..+.+ .+++.|-|++. +++.+.+
T Consensus 29 v~~~Kv~~d~~--~~~G~~~v~~l~~~~--~~v~lD~kl~D-----ip~t~~~~~~~~~~-~Gad~vtvH~~~g~~~l~~ 98 (239)
T 1dbt_A 29 PLFVKVGMELF--YQEGPSIVKQLKERN--CELFLDLKLHD-----IPTTVNKAMKRLAS-LGVDLVNVHAAGGKKMMQA 98 (239)
T ss_dssp CCEEEECHHHH--HHHTHHHHHHHHHTT--CEEEEEEEECS-----CHHHHHHHHHHHHT-TTCSEEEEEGGGCHHHHHH
T ss_pred CcEEEECHHHH--HHhCHHHHHHHHHCC--CcEEEEecccc-----chHHHHHHHHHHHh-cCCCEEEEeCcCCHHHHHH
Confidence 577 433332 233345667777754 67776665543 24445556666654 58999999996 4444678
Q ss_pred HHHHHHhh---CCC-c--EEEEeCCC
Q 021144 259 LILSVRKV---TSK-P--VIIYPNSG 278 (317)
Q Consensus 259 ~l~~l~~~---~~~-p--l~vyPNaG 278 (317)
+++.+++. -.+ | +.|-++..
T Consensus 99 ~~~~~~~~~~~g~~~~~~~~V~~~ts 124 (239)
T 1dbt_A 99 ALEGLEEGTPAGKKRPSLIAVTQLTS 124 (239)
T ss_dssp HHHHHHHHSCTTSCCCEEEEECSCTT
T ss_pred HHHHHHhhhccCCCCccEEEEEEcCC
Confidence 88888775 323 5 66667654
No 455
>1muw_A Xylose isomerase; atomic resolution, disorder; 0.86A {Streptomyces olivochromogenes} SCOP: c.1.15.3 PDB: 1s5m_A* 1s5n_A* 2gyi_A* 1xyb_A* 1xyc_A* 1xya_A* 1xyl_A 1xym_A* 1dxi_A 3gnx_A* 1gw9_A* 1xib_A 1xic_A* 1xid_A* 1xie_A* 1xif_A* 1xig_A* 1xih_A* 1xii_A* 1xij_A ...
Probab=29.29 E-value=1.6e+02 Score=26.90 Aligned_cols=70 Identities=19% Similarity=0.182 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHhCC--CCEEEeccCCC-------HHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHH
Q 021144 165 TLKEFHRRRVLILANSG--ADLIAFETIPN-------KLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECAS 235 (317)
Q Consensus 165 el~~~h~~qi~~l~~~g--vD~l~~ET~p~-------~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~ 235 (317)
.+.+..++.++...+.| |. |++|+++. +.....+.+.+++.+ .|-.+.+.++.......|.++.+.+.
T Consensus 156 ~~~e~L~~l~~~A~~~G~~v~-l~lE~~~~e~~~~~~~~t~~~~~~li~~v~--~pn~vgl~lD~~H~~~~g~d~~~~l~ 232 (386)
T 1muw_A 156 RMKEAFDLLGEYVTSQGYDIR-FAIEPKPNEPRGDILLPTVGHALAFIERLE--RPELYGVNPEVGHEQMAGLNFPHGIA 232 (386)
T ss_dssp HHHHHHHHHHHHHHHHTCCCE-EEECCCSSSSSSEESSCSHHHHHHHHTTSS--SGGGEEECCBHHHHHTTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCeE-EEEeeCCCCCcccccCCCHHHHHHHHHHhC--CccceEEEeeccchhhcCCCHHHHHH
Confidence 34444444444445567 54 66798852 122333444455544 44113343332223457888887766
Q ss_pred Hh
Q 021144 236 IA 237 (317)
Q Consensus 236 ~~ 237 (317)
.+
T Consensus 233 ~~ 234 (386)
T 1muw_A 233 QA 234 (386)
T ss_dssp HH
T ss_pred Hh
Confidence 55
No 456
>3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A*
Probab=29.25 E-value=3.2e+02 Score=24.67 Aligned_cols=84 Identities=14% Similarity=0.100 Sum_probs=47.8
Q ss_pred CCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCCC-hhhhHH
Q 021144 180 SGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTS-PRFIHG 258 (317)
Q Consensus 180 ~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~~-p~~~~~ 258 (317)
.|+|+.--|.-....+.+.+.+.+++.+ +|+.+-. ...+ +-..+.+++..+. ..-.+-|+.+.. |+
T Consensus 163 vG~dL~g~E~~~~~~~~~~~~~~A~~~g--l~~~~Ha--gE~~---~~~~i~~al~~lg--~~rigHgv~l~~d~~---- 229 (326)
T 3pao_A 163 IAVGLDSSEVGHPPSKFQRVFDRARSEG--FLTVAHA--GEEG---PPEYIWEALDLLK--VERIDHGVRAFEDER---- 229 (326)
T ss_dssp SEEEEESCCTTCCGGGGHHHHHHHHHTT--CEECEEE--SSSS---CHHHHHHHHHTTC--CSSEEECGGGGGCHH----
T ss_pred eeeCCCCCCCCCCHHHHHHHHHHHHHcC--Cceeeec--CCCC---CHHHHHHHHhcCC--CceeeeeeeecccHH----
Confidence 4568888887777788888888888866 7755444 2211 1122333443332 233566777763 43
Q ss_pred HHHHHHhhCCCcEEEEeCC
Q 021144 259 LILSVRKVTSKPVIIYPNS 277 (317)
Q Consensus 259 ~l~~l~~~~~~pl~vyPNa 277 (317)
+++.+++. +.++.+-|-+
T Consensus 230 l~~~l~~~-~i~le~cP~S 247 (326)
T 3pao_A 230 LMRRLIDE-QIPLTVCPLS 247 (326)
T ss_dssp HHHHHHHH-TCCEEECHHH
T ss_pred HHHHHHHc-CCeEEECchh
Confidence 34444442 5677776643
No 457
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ...
Probab=29.24 E-value=2.3e+02 Score=28.07 Aligned_cols=74 Identities=22% Similarity=0.249 Sum_probs=48.9
Q ss_pred eEEEEeeCCC-cCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccE
Q 021144 134 VLVAASVGSY-GAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPA 212 (317)
Q Consensus 134 ~~VagsiGP~-g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv 212 (317)
+...|.|++. |--++ |....- +.++..+..+ ++..++.|||+|++==+.+.++++.+.+++++.+.+.++
T Consensus 216 V~~gG~L~s~KgvNlP-g~~l~l---palTekD~~d-----l~f~~~~~vD~ia~SfVr~a~Dv~~~r~~L~~~g~~i~I 286 (550)
T 3gr4_A 216 VENGGSLGSKKGVNLP-GAAVDL---PAVSEKDIQD-----LKFGVEQDVDMVFASFIRKASDVHEVRKVLGEKGKNIKI 286 (550)
T ss_dssp EEECEEECSSCBEECT-TSCCCC---CSSCHHHHHH-----HHHHHHTTCSEEEETTCCSHHHHHHHHHHHTTTTTTSEE
T ss_pred EEeCcEEcCCceeecC-CCccCC---CCCCHHHHHH-----HHHHHHcCCCEEEecCCCCHHHHHHHHHHHHhcCCCceE
Confidence 3456667764 33233 333221 2367666555 556677899999999899999999999999887645566
Q ss_pred EEEE
Q 021144 213 WFSF 216 (317)
Q Consensus 213 ~iSf 216 (317)
+.-+
T Consensus 287 IAKI 290 (550)
T 3gr4_A 287 ISKI 290 (550)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6443
No 458
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=29.21 E-value=89 Score=27.96 Aligned_cols=45 Identities=16% Similarity=0.195 Sum_probs=33.2
Q ss_pred HHHHHHHHHHhCCCCEEEecc--CCCHHHHHHHHHHHHHhCCCccEEEEE
Q 021144 169 FHRRRVLILANSGADLIAFET--IPNKLEAKAYAELLEEEGITIPAWFSF 216 (317)
Q Consensus 169 ~h~~qi~~l~~~gvD~l~~ET--~p~~~Ea~a~~~~~~~~~~~~pv~iSf 216 (317)
.|.+.+..++++|..+| +|- -.+++|++.+++++++.+ +.+++.+
T Consensus 78 ~H~~~~~~al~~GkhVl-~EKP~a~~~~e~~~l~~~a~~~~--~~~~v~~ 124 (334)
T 3ohs_X 78 QHKAAVMLCLAAGKAVL-CEKPMGVNAAEVREMVTEARSRG--LFLMEAI 124 (334)
T ss_dssp GHHHHHHHHHHTTCEEE-EESSSSSSHHHHHHHHHHHHHTT--CCEEEEC
T ss_pred HHHHHHHHHHhcCCEEE-EECCCCCCHHHHHHHHHHHHHhC--CEEEEEE
Confidence 47777888888897755 583 348999999999888765 6666555
No 459
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}
Probab=29.20 E-value=3.5e+02 Score=25.09 Aligned_cols=213 Identities=11% Similarity=0.074 Sum_probs=108.5
Q ss_pred HHHHHhhccCCeEE---EecchHHHHH----H-CCCCCCC----ccc-------c--------ccccCCChHHHHHHHHH
Q 021144 11 FMTDFLQKCGGYSV---VDGGFATELE----R-HGADLND----PLW-------S--------AKCLVSSPHLVRKVHLD 63 (317)
Q Consensus 11 ~l~~~l~~~~~~li---lDGgmgT~L~----~-~G~~~~~----~lw-------s--------~~~ll~~Pe~V~~iH~~ 63 (317)
..++++++-.++-+ |||++--++. + +|+++.. .+| + ...++..++.++++-.+
T Consensus 21 ~~~~Fi~~LPKvELH~HLdGsl~p~tl~~LA~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~t~ed~~r~a~e 100 (380)
T 4gxw_A 21 AHRAFFHALPKVELHCHLLGAVRHDTFVALAQRSGAPIERAEIDAFYARGEKPVGVLHVLRALDRYLLTRPDDLRRIAYE 100 (380)
T ss_dssp HHHHHHHHSCEEECCBBGGGCCCHHHHHHHHHHHTCSCCTTHHHHHHCCCSSCCCSHHHHHHHHHHTCCSHHHHHHHHHH
T ss_pred HHHHHHHhChhHHhhcCCcCCCCHHHHHHHHHHhCCCCCcccHHHHHHhhhccccHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 35677765444433 8999865433 2 3765542 111 0 12256788888888888
Q ss_pred HHHhhc-c-ccccccccccHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCCCeEEEEee
Q 021144 64 YLDAGA-N-IIITASYQATIQGFEA-KGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSRPVLVAASV 140 (317)
Q Consensus 64 Yl~AGA-d-iI~TnTy~as~~~l~~-~g~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~~~~~~~~~~~~Vagsi 140 (317)
|++-=| | |+-.=. +.++....+ .|++.+++.+.+.++++-| ..++.- ..+ +|...+
T Consensus 101 ~~ed~a~dgV~Y~Ei-rf~P~~~~~~~Gl~~~~vv~av~~g~~~a---~~~~gi----------------~~r-lI~~~~ 159 (380)
T 4gxw_A 101 YLEDAAAHNVRHAEF-FWNPTGTVRVSGIPYADAQAAIVTGMRDA---ARDFGI----------------GAR-LIPSID 159 (380)
T ss_dssp HHHHHHTTTEEEEEE-EECHHHHHHTTCCCHHHHHHHHHHHHHHH---HHHHCC----------------EEE-EEEEEE
T ss_pred HHHHHHHCCCeEEEE-EcCHHHhccccCCCHHHHHHHHHHHHHHH---HHhcCC----------------cEE-EEEeec
Confidence 876432 2 322221 234544433 5888665555555555433 333210 011 222111
Q ss_pred CCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHh---CCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEE
Q 021144 141 GSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILAN---SGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFN 217 (317)
Q Consensus 141 GP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~---~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~ 217 (317)
. ..+.++..+.... +..... .|+|+---|.-........+.+.+++.+ +|+.+-.
T Consensus 160 -------R-----------~~~~e~a~~~~~~-a~~~~~~~VvG~dL~g~E~~~p~~~f~~~f~~ar~~G--l~~t~HA- 217 (380)
T 4gxw_A 160 -------R-----------EQDPDEAVAIVDW-MKANRADEVAGIGIDYRENDRPPELFWKAYRDARAAG--FRTTAHA- 217 (380)
T ss_dssp -------T-----------TSCHHHHHHHHHH-HHHTCCTTBCEEEEESCCTTCCGGGGHHHHHHHHHTT--CEEEEEE-
T ss_pred -------C-----------CCCHHHHHHHHHH-HHHhCCCCEEEEeecCCCCCCCHHHHHHHHHHHHHcC--CCeeeec-
Confidence 1 1345555443322 222222 3568877787655666667777788766 6665544
Q ss_pred EcCCCccc-CCCcHHHHHHHhhcCCCceEEEEcCC-ChhhhHHHHHHHHhhCCCcEEEEeCC
Q 021144 218 SKDGINVV-SGDSILECASIADSCEQVVAVGINCT-SPRFIHGLILSVRKVTSKPVIIYPNS 277 (317)
Q Consensus 218 ~~~~~~l~-~G~~l~~a~~~~~~~~~~~aiGvNC~-~p~~~~~~l~~l~~~~~~pl~vyPNa 277 (317)
|... .++++.+++..+. ..-++-|++|. +|+.+. .+++. ++||-+-|-+
T Consensus 218 ----GE~~~p~~~i~~al~~lg--a~RIgHG~~~~~d~~L~~----~l~~~-~I~lEvCP~S 268 (380)
T 4gxw_A 218 ----GEFGMPWRNVETAVDLLH--VDRVDHGYTIVDNPELCA----RYAER-GIVFTVVPTN 268 (380)
T ss_dssp ----SCTTCCHHHHHHHHHTSC--CSEEEECGGGGGCHHHHH----HHHHH-TCEEEECTTC
T ss_pred ----cccCCchHHHHHHHHHcC--CcccccceeeccChHHHH----HHHHh-CceeEECCcc
Confidence 2221 1235666665442 34577889997 555433 33332 5666666643
No 460
>2ffc_A Orotidine 5-monophosphate decarboxylase; PV-PF10_0225, SGC, structural genomics, struc genomics consortium, lyase; HET: U5P; 1.70A {Plasmodium vivax} SCOP: c.1.2.3 PDB: 2guu_A*
Probab=29.19 E-value=85 Score=29.27 Aligned_cols=88 Identities=10% Similarity=0.042 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHhCCCCEE-----EeccCC--CHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhc
Q 021144 167 KEFHRRRVLILANSGADLI-----AFETIP--NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADS 239 (317)
Q Consensus 167 ~~~h~~qi~~l~~~gvD~l-----~~ET~p--~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~ 239 (317)
..|-+..++.+.+ .|+++ +||..- -+..++.+++.+++.+ .+|++-+-+-|= |.+...+++.+..
T Consensus 115 ~~f~~~ivdal~~-~v~~vKvg~~lfea~G~~gi~~L~~~v~~lr~~g--~~VflDlK~~DI-----gnTva~ya~a~~~ 186 (353)
T 2ffc_A 115 NHFCFYIINETKE-YALAYKMNFAFYLPYGSLGVDVLKNVFDYLHHLN--VPTILDIKMNDI-----GNTVKHYRKFIFD 186 (353)
T ss_dssp HHHHHHHHHHHGG-GCSEEEEEGGGGSTTTHHHHHHHHHHHHHHHHHT--CCEEEEEEECCC-----HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcc-ccceeeccHHHHHhcCHHHHHHHHHHHHHHHHcC--CcEEEEEecCch-----HHHHHHHHHHHHH
Confidence 6666767777754 46665 344432 2344555677788765 899988877663 4556666665532
Q ss_pred CCCceEEEEcCC-ChhhhHHHHHH
Q 021144 240 CEQVVAVGINCT-SPRFIHGLILS 262 (317)
Q Consensus 240 ~~~~~aiGvNC~-~p~~~~~~l~~ 262 (317)
..+++++-|++. +.+.|.++++.
T Consensus 187 ~lgaD~vTVhp~~G~dsl~~a~~~ 210 (353)
T 2ffc_A 187 YLRSDSCTANIYMGTQMLRDICLD 210 (353)
T ss_dssp TSCCSEEEECCTTCSTTHHHHHBC
T ss_pred HcCCCEEEEeCCCCHHHHHHHHHH
Confidence 368999999997 56777777743
No 461
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=29.10 E-value=83 Score=28.68 Aligned_cols=45 Identities=11% Similarity=0.163 Sum_probs=32.5
Q ss_pred HHHHHHHHHHhCCCCEEEecc--CCCHHHHHHHHHHHHHhCCCccEEEEE
Q 021144 169 FHRRRVLILANSGADLIAFET--IPNKLEAKAYAELLEEEGITIPAWFSF 216 (317)
Q Consensus 169 ~h~~qi~~l~~~gvD~l~~ET--~p~~~Ea~a~~~~~~~~~~~~pv~iSf 216 (317)
.|.+.+..++++|..+|. |- -.+++|++.+++++++.+ +++++.|
T Consensus 80 ~H~~~~~~al~aGkhVl~-EKPla~~~~e~~~l~~~a~~~g--~~~~v~~ 126 (359)
T 3m2t_A 80 LHFEMGLLAMSKGVNVFV-EKPPCATLEELETLIDAARRSD--VVSGVGM 126 (359)
T ss_dssp HHHHHHHHHHHTTCEEEE-CSCSCSSHHHHHHHHHHHHHHT--CCEEECC
T ss_pred HHHHHHHHHHHCCCeEEE-ECCCcCCHHHHHHHHHHHHHcC--CEEEEEe
Confidence 577788888888988654 73 357889998888888765 5555544
No 462
>2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A
Probab=29.02 E-value=49 Score=31.34 Aligned_cols=65 Identities=11% Similarity=0.119 Sum_probs=41.0
Q ss_pred HHHHHHHHHHhCCC--CEEEeccC-----CCHHHHHHHHHHHHHhCCCccEEEE-EEEcCCCcccCCCcHHHHHHHhhc
Q 021144 169 FHRRRVLILANSGA--DLIAFETI-----PNKLEAKAYAELLEEEGITIPAWFS-FNSKDGINVVSGDSILECASIADS 239 (317)
Q Consensus 169 ~h~~qi~~l~~~gv--D~l~~ET~-----p~~~Ea~a~~~~~~~~~~~~pv~iS-f~~~~~~~l~~G~~l~~a~~~~~~ 239 (317)
.+...++.|.+.|+ |.|-+..- |+..+++..++.+.+.+ +||+|| +.+... ....+++++..+..
T Consensus 184 ~~~~~v~~l~~~g~~iDgiG~q~H~~~~~~~~~~~~~~l~~~a~~g--~~v~iTEldv~~~----qa~~y~~~~~~~~~ 256 (436)
T 2d1z_A 184 GVYNMVRDFKQRGVPIDCVGFQSHFNSGSPYNSNFRTTLQNFAALG--VDVAITELDIQGA----SSSTYAAVTNDCLA 256 (436)
T ss_dssp HHHHHHHHHHHHTCCCCEEEECCEEBTTBCCCTTHHHHHHHHHTTT--CEEEEEEEEETTC----CHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCcccEEEEeeEEcCCCCCHHHHHHHHHHHHHcC--CeEEEeecchhHH----HHHHHHHHHHHHHh
Confidence 34456777777664 99987543 45677888888777665 999998 444411 22335556655543
No 463
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=29.00 E-value=2.6e+02 Score=23.58 Aligned_cols=83 Identities=12% Similarity=0.081 Sum_probs=52.0
Q ss_pred HHHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCC
Q 021144 172 RRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCT 251 (317)
Q Consensus 172 ~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~ 251 (317)
++++...++|+|++..-- .+ ..++++.++.+ .|+++.. .++.++.+... .+++.|++
T Consensus 79 d~~~~A~~aGAd~v~~p~-~d----~~v~~~~~~~g--~~~i~G~-----------~t~~e~~~A~~--~Gad~v~~--- 135 (214)
T 1wbh_A 79 QQLAEVTEAGAQFAISPG-LT----EPLLKAATEGT--IPLIPGI-----------STVSELMLGMD--YGLKEFKF--- 135 (214)
T ss_dssp HHHHHHHHHTCSCEEESS-CC----HHHHHHHHHSS--SCEEEEE-----------SSHHHHHHHHH--TTCCEEEE---
T ss_pred HHHHHHHHcCCCEEEcCC-CC----HHHHHHHHHhC--CCEEEec-----------CCHHHHHHHHH--CCCCEEEE---
Confidence 467777778999997542 22 24455566654 7777642 13667766654 47899999
Q ss_pred Ch-hhh--HHHHHHHHhhC-CCcEEEEeCCCC
Q 021144 252 SP-RFI--HGLILSVRKVT-SKPVIIYPNSGE 279 (317)
Q Consensus 252 ~p-~~~--~~~l~~l~~~~-~~pl~vyPNaG~ 279 (317)
-| ..+ ...|+.++... +.|+ .|=+|-
T Consensus 136 Fpa~~~gG~~~lk~i~~~~~~ipv--vaiGGI 165 (214)
T 1wbh_A 136 FPAEANGGVKALQAIAGPFSQVRF--CPTGGI 165 (214)
T ss_dssp TTTTTTTHHHHHHHHHTTCTTCEE--EEBSSC
T ss_pred ecCccccCHHHHHHHhhhCCCCeE--EEECCC
Confidence 33 222 56778887765 5664 555663
No 464
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=28.99 E-value=3.6e+02 Score=25.17 Aligned_cols=43 Identities=14% Similarity=0.044 Sum_probs=32.6
Q ss_pred HHHHHHHhCCCCEEEeccC-----------CCHHHHHHHHHHHHHhCCCccEEEEE
Q 021144 172 RRVLILANSGADLIAFETI-----------PNKLEAKAYAELLEEEGITIPAWFSF 216 (317)
Q Consensus 172 ~qi~~l~~~gvD~l~~ET~-----------p~~~Ea~a~~~~~~~~~~~~pv~iSf 216 (317)
+.++.+.++|+|++.+-++ +..+..+.+.++.++.+ +|++.++
T Consensus 160 ~~a~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~~G--l~~~te~ 213 (385)
T 3nvt_A 160 AVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEYG--LGVISEI 213 (385)
T ss_dssp HHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHT--CEEEEEC
T ss_pred HHHHHHHHcCCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHHcC--CEEEEec
Confidence 4677788899999988774 23667777777777776 8998665
No 465
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=28.77 E-value=2.8e+02 Score=25.39 Aligned_cols=75 Identities=17% Similarity=0.235 Sum_probs=42.8
Q ss_pred CCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCCChhhhHHHHHHHHhhCCCc
Q 021144 191 PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPRFIHGLILSVRKVTSKP 270 (317)
Q Consensus 191 p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~~p~~~~~~l~~l~~~~~~p 270 (317)
||...=...-.+++..| ..++. |. ..+..+.-|+++.|.++.+.. . +++|.+-..... .++.+.+..+.|
T Consensus 68 pSTRTR~SFE~A~~~LG-g~~i~--l~-~~~ss~~kgEsl~DTarvLs~-~-~D~iviR~~~~~----~~~~lA~~~~vP 137 (325)
T 1vlv_A 68 RSTRTRLAFETAFAEEG-GHPIF--LS-PNDIHLGAKESLEDTARVLGR-M-VDAIMFRGYKQE----TVEKLAEYSGVP 137 (325)
T ss_dssp CCHHHHHHHHHHHHHTT-CEEEE--EC-TTTCCTTTSSCHHHHHHHHHT-T-CSEEEEESSCHH----HHHHHHHHHCSC
T ss_pred CCcchHHHHHHHHHHcC-CeEEE--EC-CccccCCCCcCHHHHHHHHHH-h-CCEEEEECCChH----HHHHHHHhCCCC
Confidence 56666444444566666 23333 22 234456688999998888764 3 577777765433 344444445667
Q ss_pred EEEEeCCC
Q 021144 271 VIIYPNSG 278 (317)
Q Consensus 271 l~vyPNaG 278 (317)
++ |+|
T Consensus 138 VI---Na~ 142 (325)
T 1vlv_A 138 VY---NGL 142 (325)
T ss_dssp EE---ESC
T ss_pred EE---eCC
Confidence 53 554
No 466
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=28.73 E-value=2.3e+02 Score=23.96 Aligned_cols=64 Identities=14% Similarity=0.000 Sum_probs=41.2
Q ss_pred HHHHHHHHHhCCCCEEEeccCCC-----HHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhh
Q 021144 170 HRRRVLILANSGADLIAFETIPN-----KLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIAD 238 (317)
Q Consensus 170 h~~qi~~l~~~gvD~l~~ET~p~-----~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~ 238 (317)
.++.++.+.+.||. |++|+++. +.++..+++.++..+ .| +.++++-......|.++.+.++.+.
T Consensus 114 l~~l~~~a~~~Gv~-l~lEn~~~~~~~~~~~~~~ll~~v~~~~--~~--vg~~~D~g~~~~~~~d~~~~~~~~~ 182 (264)
T 1yx1_A 114 LAALGRRLARHGLQ-LLVENDQTPQGGRIEVLERFFRLAERQQ--LD--LAMTFDIGNWRWQEQAADEAALRLG 182 (264)
T ss_dssp HHHHHHHHTTSSCE-EEEECCSSHHHHCHHHHHHHHHHHHHTT--CS--EEEEEETTGGGGGTCCHHHHHHHHG
T ss_pred HHHHHHHHHhcCCE-EEEecCCCCCCCCHHHHHHHHHHHHhcC--CC--eEEEEehhhhhhcCCCHHHHHHHhh
Confidence 33344555668884 56799885 567777777666544 46 5666655444555778888887764
No 467
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=28.73 E-value=21 Score=32.43 Aligned_cols=30 Identities=23% Similarity=0.277 Sum_probs=26.0
Q ss_pred ccCCChHHHHHHHHHHHHhhcccccccc-cc
Q 021144 49 CLVSSPHLVRKVHLDYLDAGANIIITAS-YQ 78 (317)
Q Consensus 49 ~ll~~Pe~V~~iH~~Yl~AGAdiI~TnT-y~ 78 (317)
.+++++|.|++.-+-=++||||.|-|.| |.
T Consensus 166 ~~L~d~e~i~~A~~ia~eaGADfVKTSTGf~ 196 (281)
T 2a4a_A 166 GELKTEDLIIKTTLAVLNGNADFIKTSTGKV 196 (281)
T ss_dssp HHHCSHHHHHHHHHHHHTTTCSEEECCCSCS
T ss_pred ccCCcHHHHHHHHHHHHHhCCCEEEeCCCCC
Confidence 3458889899999999999999999998 54
No 468
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=28.72 E-value=2.1e+02 Score=25.98 Aligned_cols=76 Identities=13% Similarity=0.175 Sum_probs=47.9
Q ss_pred CCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCCChhhhHHHHHHHHhhCCCc
Q 021144 191 PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPRFIHGLILSVRKVTSKP 270 (317)
Q Consensus 191 p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~~p~~~~~~l~~l~~~~~~p 270 (317)
||..-=...-.+++..| ..++.+ . ..+..+.-|+++.|.++.+.. .++++|.+-+..... ++.+.+..+.|
T Consensus 46 ~STRTR~SFE~A~~~LG-g~~i~l--~-~~~ss~~kgEsl~DTarvLs~-~~~D~iviR~~~~~~----~~~la~~~~vP 116 (304)
T 3r7f_A 46 PSTRTRFSFEVAEKKLG-MNVLNL--D-GTSTSVQKGETLYDTIRTLES-IGVDVCVIRHSEDEY----YEELVSQVNIP 116 (304)
T ss_dssp CCSHHHHHHHHHHHHTT-CEEEEE--E-TTSTTSCSSSCHHHHHHHHHH-HTCCEEEEECSSTTC----HHHHHHHCSSC
T ss_pred CChhHHHhHHHHHHHCC-CeEEEE--C-cccccCCCCCCHHHHHHHHHH-hcCCEEEEecCChhH----HHHHHHhCCCC
Confidence 45555333334566666 234443 2 234557789999999998875 567899988875443 34445567788
Q ss_pred EEEEeCCC
Q 021144 271 VIIYPNSG 278 (317)
Q Consensus 271 l~vyPNaG 278 (317)
+ -|+|
T Consensus 117 V---INag 121 (304)
T 3r7f_A 117 I---LNAG 121 (304)
T ss_dssp E---EESC
T ss_pred E---EeCC
Confidence 6 4776
No 469
>1vfs_A Alanine racemase; TIM-barrel, greek-KEY motief, isomerase; HET: KCX DCS; 1.90A {Streptomyces lavendulae} SCOP: b.49.2.2 c.1.6.1 PDB: 1vfh_A* 1vft_A*
Probab=28.68 E-value=1.1e+02 Score=28.27 Aligned_cols=60 Identities=12% Similarity=-0.006 Sum_probs=40.5
Q ss_pred ccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHH------HHHhhcCCCceEEEEcC
Q 021144 188 ETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILEC------ASIADSCEQVVAVGINC 250 (317)
Q Consensus 188 ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a------~~~~~~~~~~~aiGvNC 250 (317)
-++.++++++.+.+++++.+...+|++-+. .+.-+.|-+.+++ ++.+....++...|+-|
T Consensus 102 ~~vds~~~l~~l~~~a~~~~~~~~V~l~vd---tG~~R~G~~~~e~~~~~~~~~~i~~~~~l~l~Gl~t 167 (386)
T 1vfs_A 102 VSVSGMWALDEVRAAARAAGRTARIQLKAD---TGLGRNGCQPADWAELVGAAVAAQAEGTVQVTGVWS 167 (386)
T ss_dssp EEECSHHHHHHHHHHHHHHTSCEEEEEEBC---SSCCSSSBCHHHHHHHHHHHHHHHHTTSEEEEEEEC
T ss_pred EEECCHHHHHHHHHHHHhcCCceEEEEEEc---CCCCCCCCCHhHHHHHHHHHHHHHhCCCceEEEEEe
Confidence 377899999998887776664456666553 2345678877654 44454456778888866
No 470
>2egz_A 3-dehydroquinate dehydratase; aquifex aeolicus VF5, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: TLA; 1.75A {Aquifex aeolicus} PDB: 2ysw_A
Probab=28.68 E-value=2.7e+02 Score=23.62 Aligned_cols=99 Identities=14% Similarity=0.009 Sum_probs=57.0
Q ss_pred HHHHHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEc
Q 021144 170 HRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGIN 249 (317)
Q Consensus 170 h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvN 249 (317)
|.+.++..++. +|++=+|-.. ....+.+.+.++..+ ..+++|+.--+ .+++-+.+.+.+..+.. .+. .+=+-
T Consensus 73 ~~~ll~~~~~~-~d~iDvEl~~-~~~~~~l~~~~~~~g--~kvI~S~Hdf~--~tp~~~el~~~~~~~~~-~ga-ivKia 144 (219)
T 2egz_A 73 REELFEELSPL-SDYTDIELSS-RGLLVKLYNITKEAG--KKLIISYHNFE--LTPPNWIIREVLREGYR-YGG-IPKIA 144 (219)
T ss_dssp HHHHHHHHTTT-SSEEEEETTC-HHHHHHHHHHHHHTT--CEEEEEEEESS--CCCCHHHHHHHHHHHHH-TTS-EEEEE
T ss_pred HHHHHHHHHhc-CCEEEEEccC-CccHHHHHHHHHHcC--CEEEEEecCCC--CCcCHHHHHHHHHHHHH-cCC-EEEEE
Confidence 34445555666 9999999654 222456666677655 67999985322 12222223444444443 343 43333
Q ss_pred C--CChhhhHHHHHHHHhhCCCcEEEEeCC
Q 021144 250 C--TSPRFIHGLILSVRKVTSKPVIIYPNS 277 (317)
Q Consensus 250 C--~~p~~~~~~l~~l~~~~~~pl~vyPNa 277 (317)
+ .+++.+..+++..++. +.|++.+.-+
T Consensus 145 ~~a~~~~D~l~ll~~~~~~-~~P~I~~~MG 173 (219)
T 2egz_A 145 VKANSYEDVARLLCISRQV-EGEKILISMG 173 (219)
T ss_dssp EECSSHHHHHHHHHHHTTS-CSCBEEEEES
T ss_pred EccCCHHHHHHHHHHHHhC-CCCEEEEECC
Confidence 3 4567777777765543 6898776654
No 471
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=28.48 E-value=85 Score=25.42 Aligned_cols=19 Identities=11% Similarity=0.148 Sum_probs=11.1
Q ss_pred HHhCCCCEEEeccCCCHHH
Q 021144 177 LANSGADLIAFETIPNKLE 195 (317)
Q Consensus 177 l~~~gvD~l~~ET~p~~~E 195 (317)
|...|-|++.+-.....++
T Consensus 42 l~~~G~eVi~lG~~~p~e~ 60 (161)
T 2yxb_A 42 LRDAGFEVVYTGLRQTPEQ 60 (161)
T ss_dssp HHHTTCEEECCCSBCCHHH
T ss_pred HHHCCCEEEECCCCCCHHH
Confidence 4456777766665555544
No 472
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=28.34 E-value=2.8e+02 Score=23.78 Aligned_cols=102 Identities=12% Similarity=0.080 Sum_probs=54.3
Q ss_pred HHHHHHhCCCCEE-----EeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcC-CCcccCCCc--HHHHHHHhhcCCCce
Q 021144 173 RVLILANSGADLI-----AFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKD-GINVVSGDS--ILECASIADSCEQVV 244 (317)
Q Consensus 173 qi~~l~~~gvD~l-----~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~-~~~l~~G~~--l~~a~~~~~~~~~~~ 244 (317)
+++.+.+.|+|++ +++.. +..++...+..+++...++|+++++.... +|.. ++.. -.+....+....+++
T Consensus 22 ~~~~~~~~~~D~vElRvD~l~~~-~~~~v~~~~~~lr~~~~~~PiI~T~R~~~eGG~~-~~~~~~~~~ll~~~~~~~~~d 99 (238)
T 1sfl_A 22 QKINHRIDAIDVLELRIDQFENV-TVDQVAEMITKLKVMQDSFKLLVTYRTKLQGGYG-QFTNDSYLNLISDLANINGID 99 (238)
T ss_dssp HHHHHTTTTCSEEEEECTTSTTC-CHHHHHHHHHHHC---CCSEEEEECCBGGGTSCB-CCCHHHHHHHHHHGGGCTTCC
T ss_pred HHHHhhhcCCCEEEEEecccccC-CHHHHHHHHHHHHHhccCCCEEEEeeccccCCCC-CCCHHHHHHHHHHHHHhCCCC
Confidence 3455566778877 34544 56677777777776433589999886544 3433 3432 112333333323577
Q ss_pred EEEEcCCC--h-hhhHHHHHHHHhhCCCcEEEEeC
Q 021144 245 AVGINCTS--P-RFIHGLILSVRKVTSKPVIIYPN 276 (317)
Q Consensus 245 aiGvNC~~--p-~~~~~~l~~l~~~~~~pl~vyPN 276 (317)
.|=|--.. + +.+..+++..++...+-++-|=|
T Consensus 100 ~iDvEl~~~~~~~~~~~l~~~~~~~~~kvI~S~Hd 134 (238)
T 1sfl_A 100 MIDIEWQADIDIEKHQRIITHLQQYNKEVIISHHN 134 (238)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred EEEEEccCCCChHHHHHHHHHHHhcCCEEEEEecC
Confidence 77776654 4 45566666655432233444433
No 473
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=28.30 E-value=2.8e+02 Score=26.28 Aligned_cols=104 Identities=18% Similarity=0.205 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHHhCCCCEEEec-cCC---------CHHHHHHHHHHHHHh-------------------CCCcc-EEEE
Q 021144 166 LKEFHRRRVLILANSGADLIAFE-TIP---------NKLEAKAYAELLEEE-------------------GITIP-AWFS 215 (317)
Q Consensus 166 l~~~h~~qi~~l~~~gvD~l~~E-T~p---------~~~Ea~a~~~~~~~~-------------------~~~~p-v~iS 215 (317)
..+-|.+-++.+.+. +|+|-+- ..| +.+.+..+++++++. ..++| |++-
T Consensus 197 ~~~Dy~~~a~~l~~~-ad~ieiNiScPNt~Gl~~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~VK 275 (415)
T 3i65_A 197 IVDDLKYCINKIGRY-ADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDEFLWFNTTKKKPLVFVK 275 (415)
T ss_dssp HHHHHHHHHHHHGGG-CSEEEEECCCCC--------CCHHHHHHHHHHHHHHHHHHHHCCSCHHHHCCSSSSSCCEEEEE
T ss_pred cHHHHHHHHHHHHhh-CCEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCeEEEE
Confidence 344566667777654 8998765 223 334555666666553 12588 8877
Q ss_pred EEEcCCCcccCCCcHHHHHHHhhcCCCceEEEE-cCCC-----------------h---hhhHHHHHHHHhhC--CCcEE
Q 021144 216 FNSKDGINVVSGDSILECASIADSCEQVVAVGI-NCTS-----------------P---RFIHGLILSVRKVT--SKPVI 272 (317)
Q Consensus 216 f~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGv-NC~~-----------------p---~~~~~~l~~l~~~~--~~pl~ 272 (317)
++..- +-+.+.+.++.+.+ .++++|=+ |-+. + ......+.++++.. +.||+
T Consensus 276 i~pd~-----~~~~i~~iA~~a~~-aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPII 349 (415)
T 3i65_A 276 LAPDL-----NQEQKKEIADVLLE-TNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPII 349 (415)
T ss_dssp ECSCC-----CHHHHHHHHHHHHH-HTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEE
T ss_pred ecCCC-----CHHHHHHHHHHHHH-cCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEE
Confidence 75321 11235666666654 36666433 4321 1 12346777787776 57765
Q ss_pred EEeCCC
Q 021144 273 IYPNSG 278 (317)
Q Consensus 273 vyPNaG 278 (317)
-++|
T Consensus 350 --g~GG 353 (415)
T 3i65_A 350 --ASGG 353 (415)
T ss_dssp --ECSS
T ss_pred --EECC
Confidence 4555
No 474
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=28.21 E-value=3e+02 Score=24.67 Aligned_cols=93 Identities=13% Similarity=-0.021 Sum_probs=54.7
Q ss_pred HHHHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhc--CCCce--EE
Q 021144 171 RRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADS--CEQVV--AV 246 (317)
Q Consensus 171 ~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~--~~~~~--ai 246 (317)
.++++.+.+.|.+.|=+-.=.+.++....++++++.+.+.++.+.. + .|-+++++++.+.. ..++. .|
T Consensus 144 ~~~a~~~~~~Gf~~iKik~g~~~~~d~~~v~avr~~g~~~~l~vDa----n----~~~~~~~a~~~~~~l~~~~i~~~~i 215 (345)
T 2zad_A 144 VKEAKKIFEEGFRVIKIKVGENLKEDIEAVEEIAKVTRGAKYIVDA----N----MGYTQKEAVEFARAVYQKGIDIAVY 215 (345)
T ss_dssp HHHHHHHHHTTCSEEEEECCSCHHHHHHHHHHHHHHSTTCEEEEEC----T----TCSCHHHHHHHHHHHHHTTCCCSEE
T ss_pred HHHHHHHHHcCcCEEEEeecCCHHHHHHHHHHHHhhCCCCeEEEEC----C----CCCCHHHHHHHHHHHHhcCCCeeee
Confidence 3456666678888876543336777777788888876566765532 2 35567777666532 13444 33
Q ss_pred EEcCCChhhhHHHHHHHHhhCCCcEEE
Q 021144 247 GINCTSPRFIHGLILSVRKVTSKPVII 273 (317)
Q Consensus 247 GvNC~~p~~~~~~l~~l~~~~~~pl~v 273 (317)
==-| .|+. ...++.+++.++.|+..
T Consensus 216 E~P~-~~~~-~~~~~~l~~~~~ipia~ 240 (345)
T 2zad_A 216 EQPV-RRED-IEGLKFVRFHSPFPVAA 240 (345)
T ss_dssp ECCS-CTTC-HHHHHHHHHHSSSCEEE
T ss_pred eCCC-Cccc-HHHHHHHHHhCCCCEEE
Confidence 2222 2322 34566777777788653
No 475
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=28.19 E-value=1.9e+02 Score=21.66 Aligned_cols=75 Identities=13% Similarity=0.036 Sum_probs=36.2
Q ss_pred HHhCCCCEEEeccC-CCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCCChhh
Q 021144 177 LANSGADLIAFETI-PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPRF 255 (317)
Q Consensus 177 l~~~gvD~l~~ET~-p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~~p~~ 255 (317)
+.+..+|++++... |.. ....+++.+++..++.|+++-- +..+.......+. .+++.+-..=..++.
T Consensus 62 l~~~~~dlii~D~~l~~~-~g~~~~~~l~~~~~~~~ii~ls---------~~~~~~~~~~~~~--~g~~~~l~Kp~~~~~ 129 (150)
T 4e7p_A 62 LEKESVDIAILDVEMPVK-TGLEVLEWIRSEKLETKVVVVT---------TFKRAGYFERAVK--AGVDAYVLKERSIAD 129 (150)
T ss_dssp HTTSCCSEEEECSSCSSS-CHHHHHHHHHHTTCSCEEEEEE---------SCCCHHHHHHHHH--TTCSEEEETTSCHHH
T ss_pred hhccCCCEEEEeCCCCCC-cHHHHHHHHHHhCCCCeEEEEe---------CCCCHHHHHHHHH--CCCcEEEecCCCHHH
Confidence 34456788888743 443 2334445556555456655322 1122333334343 355555554334455
Q ss_pred hHHHHHHH
Q 021144 256 IHGLILSV 263 (317)
Q Consensus 256 ~~~~l~~l 263 (317)
+...|+.+
T Consensus 130 l~~~i~~~ 137 (150)
T 4e7p_A 130 LMQTLHTV 137 (150)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55554443
No 476
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=28.08 E-value=96 Score=27.59 Aligned_cols=44 Identities=14% Similarity=0.086 Sum_probs=28.8
Q ss_pred HHHHHHHHHhCCCCEEEecc--CCCHHHHHHHHHHHHHhCCCccEEEEE
Q 021144 170 HRRRVLILANSGADLIAFET--IPNKLEAKAYAELLEEEGITIPAWFSF 216 (317)
Q Consensus 170 h~~qi~~l~~~gvD~l~~ET--~p~~~Ea~a~~~~~~~~~~~~pv~iSf 216 (317)
|.+.+..++++|.+++. |. -.+..|++.+++++++.+ +.+++.+
T Consensus 75 h~~~~~~al~~gk~V~~-EKP~~~~~~~~~~l~~~a~~~g--~~~~~~~ 120 (325)
T 2ho3_A 75 HFAQAKAALSAGKHVIL-EKPAVSQPQEWFDLIQTAEKNN--CFIFEAA 120 (325)
T ss_dssp HHHHHHHHHHTTCEEEE-ESSCCSSHHHHHHHHHHHHHTT--CCEEEEC
T ss_pred HHHHHHHHHHcCCcEEE-ecCCcCCHHHHHHHHHHHHHcC--CEEEEEE
Confidence 66666667777876654 73 347788888888777654 4554444
No 477
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=27.92 E-value=2.9e+02 Score=25.17 Aligned_cols=93 Identities=13% Similarity=-0.036 Sum_probs=54.1
Q ss_pred HHHHHHHHhCCCCEEEecc-------CCCHHHHHHHHHHHHH-hCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhc--C
Q 021144 171 RRRVLILANSGADLIAFET-------IPNKLEAKAYAELLEE-EGITIPAWFSFNSKDGINVVSGDSILECASIADS--C 240 (317)
Q Consensus 171 ~~qi~~l~~~gvD~l~~ET-------~p~~~Ea~a~~~~~~~-~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~--~ 240 (317)
.++++.+.+.|.|.|=+=. .+++++...+++++++ .+.+.++.+-. + .|-++.++++.+.. .
T Consensus 154 ~~~a~~~~~~Gf~~iKik~g~~~~~~~~~~~~~~e~v~avr~a~g~d~~l~vDa----n----~~~~~~~a~~~~~~l~~ 225 (382)
T 1rvk_A 154 GRFAETLVKRGYKGIKLHTWMPPVSWAPDVKMDLKACAAVREAVGPDIRLMIDA----F----HWYSRTDALALGRGLEK 225 (382)
T ss_dssp HHHHHHHHHHTCSEEEEECCCTTSTTCCCHHHHHHHHHHHHHHHCTTSEEEEEC----C----TTCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCEEEEcCCcCccccccchHHHHHHHHHHHHHhCCCCeEEEEC----C----CCCCHHHHHHHHHHHHh
Confidence 3355555566877774432 1267877888888887 45567776533 2 35567777665532 2
Q ss_pred CCceEEEEcCCChhhhHHHHHHHHhhCCCcEEE
Q 021144 241 EQVVAVGINCTSPRFIHGLILSVRKVTSKPVII 273 (317)
Q Consensus 241 ~~~~aiGvNC~~p~~~~~~l~~l~~~~~~pl~v 273 (317)
.++..|==-|. +.. ...++.+++.++.|++.
T Consensus 226 ~~i~~iE~P~~-~~~-~~~~~~l~~~~~iPIa~ 256 (382)
T 1rvk_A 226 LGFDWIEEPMD-EQS-LSSYKWLSDNLDIPVVG 256 (382)
T ss_dssp TTCSEEECCSC-TTC-HHHHHHHHHHCSSCEEE
T ss_pred cCCCEEeCCCC-hhh-HHHHHHHHhhCCCCEEE
Confidence 35554432232 222 34566677777888754
No 478
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=27.80 E-value=80 Score=28.65 Aligned_cols=45 Identities=16% Similarity=0.245 Sum_probs=33.2
Q ss_pred HHHHHHHHHHhCCCCEEEecc--CCCHHHHHHHHHHHHHhCCCccEEEEE
Q 021144 169 FHRRRVLILANSGADLIAFET--IPNKLEAKAYAELLEEEGITIPAWFSF 216 (317)
Q Consensus 169 ~h~~qi~~l~~~gvD~l~~ET--~p~~~Ea~a~~~~~~~~~~~~pv~iSf 216 (317)
.|.+.+..++++|..+| +|- -.+++|++.+++++++.+ +++++.|
T Consensus 101 ~h~~~~~~al~aGk~Vl-~EKP~a~~~~ea~~l~~~a~~~g--~~~~v~~ 147 (350)
T 3rc1_A 101 LHAEWIDRALRAGKHVL-AEKPLTTDRPQAERLFAVARERG--LLLMENF 147 (350)
T ss_dssp GHHHHHHHHHHTTCEEE-EESSSCSSHHHHHHHHHHHHHTT--CCEEEEC
T ss_pred HHHHHHHHHHHCCCcEE-EeCCCCCCHHHHHHHHHHHHHhC--CEEEEEe
Confidence 36777778888998855 573 347899999999888765 6666555
No 479
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=27.77 E-value=2e+02 Score=27.32 Aligned_cols=65 Identities=22% Similarity=0.264 Sum_probs=38.6
Q ss_pred HHHHHHhhcCCCceEEEEcCCChh-----------hhHHHHHHHHhh--------------------CCCc-EEEEeCCC
Q 021144 231 LECASIADSCEQVVAVGINCTSPR-----------FIHGLILSVRKV--------------------TSKP-VIIYPNSG 278 (317)
Q Consensus 231 ~~a~~~~~~~~~~~aiGvNC~~p~-----------~~~~~l~~l~~~--------------------~~~p-l~vyPNaG 278 (317)
.++++.+.+ .+++|-|||++|. .+.++++.+++. .++| |+|.--.+
T Consensus 202 ~~~a~~l~~--~ad~ieiNiScPNt~Gl~~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~VKi~pd 279 (415)
T 3i65_A 202 KYCINKIGR--YADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDEFLWFNTTKKKPLVFVKLAPD 279 (415)
T ss_dssp HHHHHHHGG--GCSEEEEECCCCC--------CCHHHHHHHHHHHHHHHHHHHHCCSCHHHHCCSSSSSCCEEEEEECSC
T ss_pred HHHHHHHHh--hCCEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCeEEEEecCC
Confidence 344555543 3789999997652 345566655543 2578 67765332
Q ss_pred CccccccccccccCCCChhhHHHHHHHHHHcccc
Q 021144 279 ETYNAELKKWVVSFSLHFFPLELILNPFASCRLI 312 (317)
Q Consensus 279 ~~~d~~~~~w~~~~~~~~~~~~~~~~~w~~~~~~ 312 (317)
.+.+++.+.++...++|+=
T Consensus 280 ---------------~~~~~i~~iA~~a~~aGaD 298 (415)
T 3i65_A 280 ---------------LNQEQKKEIADVLLETNID 298 (415)
T ss_dssp ---------------CCHHHHHHHHHHHHHHTCS
T ss_pred ---------------CCHHHHHHHHHHHHHcCCc
Confidence 2344566777777777653
No 480
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=27.77 E-value=2.7e+02 Score=25.30 Aligned_cols=72 Identities=15% Similarity=0.249 Sum_probs=40.2
Q ss_pred CCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCCChhhhHHHHHHHHhhCCCc
Q 021144 191 PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPRFIHGLILSVRKVTSKP 270 (317)
Q Consensus 191 p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~~p~~~~~~l~~l~~~~~~p 270 (317)
||...=...-.+++..| ..++.++ . .+..+.-|+++.|.++.+.. . +++|.+-.... ..++.+.+..+.|
T Consensus 56 ~STRTR~SFe~A~~~LG-g~~i~l~--~-~~ss~~kgEsl~DTarvls~-~-~D~iviR~~~~----~~~~~lA~~~~vP 125 (315)
T 1pvv_A 56 PSTRTRVSFEVAMAHLG-GHALYLN--A-QDLQLRRGETIADTARVLSR-Y-VDAIMARVYDH----KDVEDLAKYATVP 125 (315)
T ss_dssp CCSHHHHHHHHHHHHTT-SEEEEEE--G-GGSTTTTTCCHHHHHHHHTT-T-CSEEEEECSSH----HHHHHHHHHCSSC
T ss_pred CCcchHHHHHHHHHHcC-CeEEEEC--C-ccccCCCCcCHHHHHHHHHH-h-CcEEEEecCch----HHHHHHHHhCCCC
Confidence 45554333334456665 2334333 2 33456678888888887764 3 57777766543 2344455555667
Q ss_pred EE
Q 021144 271 VI 272 (317)
Q Consensus 271 l~ 272 (317)
++
T Consensus 126 VI 127 (315)
T 1pvv_A 126 VI 127 (315)
T ss_dssp EE
T ss_pred EE
Confidence 63
No 481
>2xz9_A Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); thermophilic, PEP-utilising enzyme, transferase; 1.68A {Thermoanaerobacter tengcongensis} PDB: 2bg5_A 2xz7_A*
Probab=27.69 E-value=1.3e+02 Score=27.54 Aligned_cols=38 Identities=16% Similarity=0.252 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHhC---CCCEEEeccCCCHHH---HHHHHHHHH
Q 021144 167 KEFHRRRVLILANS---GADLIAFETIPNKLE---AKAYAELLE 204 (317)
Q Consensus 167 ~~~h~~qi~~l~~~---gvD~l~~ET~p~~~E---a~a~~~~~~ 204 (317)
.++|+.|++++..+ |.+-|++=-+.+.+| ++.+++.++
T Consensus 118 p~~~~~ql~Ai~ra~~~G~~~ImvPmV~s~~E~~~a~~~v~~~~ 161 (324)
T 2xz9_A 118 PDIFKTQLRAILRASAYGNVQIMYPMISSVEEVRKANSILEEVK 161 (324)
T ss_dssp HHHHHHHHHHHHHHGGGSCEEEEECSCCCHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHhCCCCEEEEcCCCCHHHHHHHHHHHHHHH
Confidence 36888899888764 899999999999999 555554443
No 482
>1sgj_A Citrate lyase, beta subunit; trimer, TIM barrel, structural genomics, PSI, protein structure initiative; 1.84A {Deinococcus radiodurans} SCOP: c.1.12.5
Probab=27.67 E-value=59 Score=28.92 Aligned_cols=46 Identities=15% Similarity=0.272 Sum_probs=37.1
Q ss_pred HHHHHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEE
Q 021144 170 HRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSF 216 (317)
Q Consensus 170 h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf 216 (317)
+..+++.+++ |+|.|++=-+.+.+|++.+.++++..+.+.++++.+
T Consensus 83 ~~~dl~~~l~-g~~~i~lPkv~s~~~v~~~~~~l~~~g~~~~i~~~I 128 (284)
T 1sgj_A 83 FEDDLSVLTP-ELSGVVVPKLEMGAEARQVAQMLQERSLPLPILAGL 128 (284)
T ss_dssp HHHHGGGCCT-TSSEEEECSCCSHHHHHHHHHHHHHTTCCCCEEEEE
T ss_pred HHHHHHHHhc-cCCEEEeCCCCCHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 5567788888 999999999999999999999888754346777665
No 483
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=27.60 E-value=1e+02 Score=27.33 Aligned_cols=44 Identities=25% Similarity=0.366 Sum_probs=28.5
Q ss_pred HHHHHHHHHhCCCCEEEec-c-CCCHHHHHHHHHHHHHhCCCccEEEEE
Q 021144 170 HRRRVLILANSGADLIAFE-T-IPNKLEAKAYAELLEEEGITIPAWFSF 216 (317)
Q Consensus 170 h~~qi~~l~~~gvD~l~~E-T-~p~~~Ea~a~~~~~~~~~~~~pv~iSf 216 (317)
|.+.+..++++|..++ +| . ..+..|++.+.+++++.+ +.+++.+
T Consensus 82 h~~~~~~al~~Gk~v~-~eKP~~~~~~~~~~l~~~a~~~g--~~~~~~~ 127 (315)
T 3c1a_A 82 HAEITLAAIASGKAVL-VEKPLTLDLAEAEAVAAAAKATG--VMVWVEH 127 (315)
T ss_dssp HHHHHHHHHHTTCEEE-EESSSCSCHHHHHHHHHHHHHHC--CCEEEEC
T ss_pred HHHHHHHHHHCCCcEE-EcCCCcCCHHHHHHHHHHHHHcC--CEEEEee
Confidence 5566666777887766 57 2 347888888888777654 4444433
No 484
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=27.56 E-value=3.4e+02 Score=24.44 Aligned_cols=75 Identities=9% Similarity=0.153 Sum_probs=48.0
Q ss_pred CCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCCChhhhHHHHHHHHhhCCCc
Q 021144 191 PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPRFIHGLILSVRKVTSKP 270 (317)
Q Consensus 191 p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~~p~~~~~~l~~l~~~~~~p 270 (317)
||...=...-.+++..| ..++.+ .. .+..+.-|+++.|.++.+.. . +++|.+-.... ..++.+.+..+.|
T Consensus 55 ~STRTR~SFe~A~~~LG-g~~i~l--~~-~~ss~~kgEsl~DTarvls~-~-~D~iviR~~~~----~~~~~la~~~~vP 124 (301)
T 2ef0_A 55 PSLRTRTTLEVAMVHLG-GHAVYL--DQ-KQVGIGEREPVRDVAKNLER-F-VEGIAARVFRH----ETVEALARHAKVP 124 (301)
T ss_dssp CCHHHHHHHHHHHHHTT-CEEEEE--EG-GGSCTTTCCCHHHHHHHHTT-T-CSEEEEECSSH----HHHHHHHHHCSSC
T ss_pred CCcchHHHHHHHHHHcC-CeEEEE--CC-cccccCCCCchHHHHHHHHH-h-CCEEEEecCCh----HHHHHHHHHCCCC
Confidence 67766444445566666 233333 32 23456789999999998874 3 68888887653 3455566667788
Q ss_pred EEEEeCCC
Q 021144 271 VIIYPNSG 278 (317)
Q Consensus 271 l~vyPNaG 278 (317)
++ |+|
T Consensus 125 VI---Na~ 129 (301)
T 2ef0_A 125 VV---NAL 129 (301)
T ss_dssp EE---EEE
T ss_pred EE---eCC
Confidence 74 665
No 485
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=27.56 E-value=2.4e+02 Score=24.55 Aligned_cols=33 Identities=21% Similarity=0.148 Sum_probs=18.9
Q ss_pred HHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhC
Q 021144 173 RVLILANSGADLIAFETIPNKLEAKAYAELLEEEG 207 (317)
Q Consensus 173 qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~ 207 (317)
.++.|++.|+++++.- -+.++++.+++.+++.+
T Consensus 25 ia~~la~~Ga~Vvi~~--~~~~~~~~~~~~l~~~g 57 (255)
T 4g81_D 25 YAEGLAAAGARVILND--IRATLLAESVDTLTRKG 57 (255)
T ss_dssp HHHHHHHTTCEEEECC--SCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHCCCEEEEEE--CCHHHHHHHHHHHHhcC
Confidence 4556777788777653 24445555555555443
No 486
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=27.53 E-value=74 Score=28.89 Aligned_cols=46 Identities=17% Similarity=0.180 Sum_probs=34.5
Q ss_pred HHHHHHHHHHhCCCCEEEecc--CCCHHHHHHHHHHHHHhCCCccEEEEEE
Q 021144 169 FHRRRVLILANSGADLIAFET--IPNKLEAKAYAELLEEEGITIPAWFSFN 217 (317)
Q Consensus 169 ~h~~qi~~l~~~gvD~l~~ET--~p~~~Ea~a~~~~~~~~~~~~pv~iSf~ 217 (317)
.|.+.+..++++|..+|. |. -.+.+|++.+++++++.+ +++++.+.
T Consensus 83 ~h~~~~~~al~aGk~V~~-EKP~a~~~~e~~~l~~~a~~~g--~~~~~~~~ 130 (362)
T 1ydw_A 83 LHVEWAIKAAEKGKHILL-EKPVAMNVTEFDKIVDACEANG--VQIMDGTM 130 (362)
T ss_dssp GHHHHHHHHHTTTCEEEE-CSSCSSSHHHHHHHHHHHHTTT--CCEEECCC
T ss_pred HHHHHHHHHHHCCCeEEE-ecCCcCCHHHHHHHHHHHHHcC--CEEEEEEe
Confidence 367777788889987765 85 458899999999888765 66665553
No 487
>1bxb_A Xylose isomerase; xylose metabolism; 2.20A {Thermus thermophilus} SCOP: c.1.15.3 PDB: 1bxc_A
Probab=27.52 E-value=2.6e+02 Score=25.55 Aligned_cols=71 Identities=14% Similarity=0.146 Sum_probs=40.5
Q ss_pred CHHHHHHHHHHHHHHHHhC--CCCEEEeccCC----------CHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCc
Q 021144 162 SLETLKEFHRRRVLILANS--GADLIAFETIP----------NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDS 229 (317)
Q Consensus 162 s~~el~~~h~~qi~~l~~~--gvD~l~~ET~p----------~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~ 229 (317)
..+.+.+..++.++...+. ||. |++|+.+ +..++ .+.+++.+ .|-.+.++++-......|.+
T Consensus 153 ~~~~~~e~L~~l~~~a~~~g~gv~-l~lE~~~~~~~~~~~~~t~~~~---~~ll~~v~--~~~~vgl~lD~gH~~~~g~d 226 (387)
T 1bxb_A 153 VWDWVREALNFMAAYAEDQGYGYR-FALEPKPNEPRGDIYFATVGSM---LAFIHTLD--RPERFGLNPEFAHETMAGLN 226 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCCE-EEECCCSSSSSSEESSCSHHHH---HHHHTTSS--SGGGEEECCBHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcE-EEEecCCCCCCCCccCCCHHHH---HHHHHHcC--CccceEEEEecCcccccCCC
Confidence 3455666666666655555 785 5679886 44444 44455544 34223443433223357888
Q ss_pred HHHHHHHhh
Q 021144 230 ILECASIAD 238 (317)
Q Consensus 230 l~~a~~~~~ 238 (317)
+.+.+..+.
T Consensus 227 ~~~~l~~~~ 235 (387)
T 1bxb_A 227 FVHAVAQAL 235 (387)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 888777664
No 488
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=27.43 E-value=88 Score=28.21 Aligned_cols=45 Identities=16% Similarity=0.139 Sum_probs=31.0
Q ss_pred HHHHHHHHHHhCCCCEEEecc--CCCHHHHHHHHHHHHHhCCCccEEEEE
Q 021144 169 FHRRRVLILANSGADLIAFET--IPNKLEAKAYAELLEEEGITIPAWFSF 216 (317)
Q Consensus 169 ~h~~qi~~l~~~gvD~l~~ET--~p~~~Ea~a~~~~~~~~~~~~pv~iSf 216 (317)
.|.+.+...+++|.+++. |- -.++.|++.+++++++.+ +++++.+
T Consensus 94 ~H~~~~~~al~aGkhVl~-EKPla~~~~ea~~l~~~a~~~g--~~~~v~~ 140 (340)
T 1zh8_A 94 LNLPFIEKALRKGVHVIC-EKPISTDVETGKKVVELSEKSE--KTVYIAE 140 (340)
T ss_dssp GHHHHHHHHHHTTCEEEE-ESSSSSSHHHHHHHHHHHHHCS--SCEEEEC
T ss_pred HHHHHHHHHHHCCCcEEE-eCCCCCCHHHHHHHHHHHHHcC--CeEEEEe
Confidence 467777777778876554 73 247888888888877754 5666555
No 489
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=27.40 E-value=91 Score=26.51 Aligned_cols=49 Identities=12% Similarity=0.087 Sum_probs=29.7
Q ss_pred HHHHHHHHhCCCCEEEec-----cCCCHHHHHHHHHHHHHhCCCccEEEEEEEcC
Q 021144 171 RRRVLILANSGADLIAFE-----TIPNKLEAKAYAELLEEEGITIPAWFSFNSKD 220 (317)
Q Consensus 171 ~~qi~~l~~~gvD~l~~E-----T~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~ 220 (317)
.+.++.+.++|+|++=+= ++|++......++.+++.. +.|+-+-+-+.+
T Consensus 22 ~~~i~~~~~~Gad~i~l~i~Dg~fv~~~~~~~~~~~~lr~~~-~~~~~v~lmv~d 75 (228)
T 1h1y_A 22 AAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHT-KAYLDCHLMVTN 75 (228)
T ss_dssp HHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHHTTC-CSEEEEEEESSC
T ss_pred HHHHHHHHHcCCCEEEEEEecCCcCcchhhCHHHHHHHHhhc-CCcEEEEEEecC
Confidence 346778888999987444 5565322223444455543 467777776654
No 490
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=27.33 E-value=2.7e+02 Score=25.25 Aligned_cols=72 Identities=15% Similarity=0.268 Sum_probs=42.4
Q ss_pred CCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCCChhhhHHHHHHHHhhCCCc
Q 021144 191 PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPRFIHGLILSVRKVTSKP 270 (317)
Q Consensus 191 p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~~p~~~~~~l~~l~~~~~~p 270 (317)
||..-=...-.+++..| ..++. |. ..+..+.-|+++.|.++.+.. . +++|.+-+... ..++.+.+..+.|
T Consensus 46 ~STRTR~SFe~A~~~LG-g~~i~--l~-~~~ss~~kgEsl~DTarvls~-~-~D~iviR~~~~----~~~~~lA~~~~vP 115 (307)
T 3tpf_A 46 NSTRTRMAFELAITELG-GKALF--LS-SNDLQLSRGEPVKDTARVIGA-M-VDFVMMRVNKH----ETLLEFARYSKAP 115 (307)
T ss_dssp CCHHHHHHHHHHHHHTT-CEEEE--EC-TTTCCTTTSSCHHHHHHHHHH-H-SSEEEEECSCH----HHHHHHHHHCSSC
T ss_pred CCcchHHhHHHHHHHcC-CeEEE--cC-cccccCCCCCCHHHHHHHHHH-h-CCEEEEecCCh----HHHHHHHHhCCCC
Confidence 56665334344566666 23333 32 233456679999999888765 3 67777776543 3455555666777
Q ss_pred EE
Q 021144 271 VI 272 (317)
Q Consensus 271 l~ 272 (317)
++
T Consensus 116 VI 117 (307)
T 3tpf_A 116 VI 117 (307)
T ss_dssp EE
T ss_pred EE
Confidence 63
No 491
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=27.29 E-value=1.1e+02 Score=26.95 Aligned_cols=95 Identities=11% Similarity=-0.009 Sum_probs=53.2
Q ss_pred HHHHHhCCCCEEEeccC--CC-----HHHHHHHHHHHHHhCCCccEEEEEEEc---CCC-c--c-----cCCCcHH-HHH
Q 021144 174 VLILANSGADLIAFETI--PN-----KLEAKAYAELLEEEGITIPAWFSFNSK---DGI-N--V-----VSGDSIL-ECA 234 (317)
Q Consensus 174 i~~l~~~gvD~l~~ET~--p~-----~~Ea~a~~~~~~~~~~~~pv~iSf~~~---~~~-~--l-----~~G~~l~-~a~ 234 (317)
++.++ +|+|.+.+-|. .+ .+-++.+++.+ + +..+++++.++ +++ . + .+|..+. +.+
T Consensus 90 ~~~~l-~Ga~~Viigs~a~~~~g~~~p~~~~~~~~~~---g-~~~ivv~iD~k~~~~~g~~V~~~gw~~~t~~~~~~e~a 164 (260)
T 2agk_A 90 CLEWL-KWASKVIVTSWLFTKEGHFQLKRLERLTELC---G-KDRIVVDLSCRKTQDGRWIVAMNKWQTLTDLELNADTF 164 (260)
T ss_dssp HHHHT-TTCSCEEECGGGBCTTCCBCHHHHHHHHHHH---C-GGGEEEEEEEEEEETTEEEEEETTTTEEEEEEESHHHH
T ss_pred HHHHh-cCCCEEEECcHHHhhcCCCCHHHHHHHHHHh---C-cCcEEEEEEeeecCCCceEEEEcCCccccCccHHHHHH
Confidence 44456 89999998875 44 54455555444 3 23567777765 312 1 1 1232334 677
Q ss_pred HHhhcCCCceEEEEcCCChhh-----hHHHHHHHHhhC----CCcEEEEe
Q 021144 235 SIADSCEQVVAVGINCTSPRF-----IHGLILSVRKVT----SKPVIIYP 275 (317)
Q Consensus 235 ~~~~~~~~~~aiGvNC~~p~~-----~~~~l~~l~~~~----~~pl~vyP 275 (317)
+.+.+ . +..|-+++...+. -..+++.+.+.. +.|+++--
T Consensus 165 ~~~~~-~-a~~il~t~i~~dG~~~G~d~eli~~l~~~~~~~~~iPVIasG 212 (260)
T 2agk_A 165 RELRK-Y-TNEFLIHAADVEGLCGGIDELLVSKLFEWTKDYDDLKIVYAG 212 (260)
T ss_dssp HHHTT-T-CSEEEEEC-------CCCCHHHHHHHHHHHTTCSSCEEEEES
T ss_pred HHHHH-h-cCEEEEEeeccccCcCCCCHHHHHHHHHhhcccCCceEEEeC
Confidence 77765 3 6666666632111 246778888877 78876543
No 492
>2jfn_A Glutamate racemase; cell WALL, isomerase, cell shape, UDP- murnac-Ala, peptidoglycan biosynthesis, peptidoglycan synthesis; HET: GLU UMA; 1.9A {Escherichia coli}
Probab=27.27 E-value=1.2e+02 Score=26.88 Aligned_cols=33 Identities=18% Similarity=0.084 Sum_probs=25.6
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHh-CCCCEEEecc
Q 021144 156 DYGDAVSLETLKEFHRRRVLILAN-SGADLIAFET 189 (317)
Q Consensus 156 ~y~~~~s~~el~~~h~~qi~~l~~-~gvD~l~~ET 189 (317)
+|+. .+.+++.+.-...++.+.+ .|+|+|++=.
T Consensus 59 PyG~-~s~~~i~~~~~~i~~~ll~~~g~d~IviaC 92 (285)
T 2jfn_A 59 PYGE-KSEAFIVERVVAIVTAVQERYPLALAVVAC 92 (285)
T ss_dssp CTTT-SCHHHHHHHHHHHHHHHHHHSCCSEEEECC
T ss_pred CCcc-CCHHHHHHHHHHHHHHHHHhCCCCEEEEEC
Confidence 3443 5789999988888887765 8999998764
No 493
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=27.19 E-value=3.7e+02 Score=24.70 Aligned_cols=99 Identities=5% Similarity=-0.076 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHHHHhCCCCEEEeccCC---------CHHHHHHHHHHHHH-hCCCccEEEEEEEcCCCcccCCCcHHHH
Q 021144 164 ETLKEFHRRRVLILANSGADLIAFETIP---------NKLEAKAYAELLEE-EGITIPAWFSFNSKDGINVVSGDSILEC 233 (317)
Q Consensus 164 ~el~~~h~~qi~~l~~~gvD~l~~ET~p---------~~~Ea~a~~~~~~~-~~~~~pv~iSf~~~~~~~l~~G~~l~~a 233 (317)
....+.+.++++...+.|.|.|=+=.-. ++++....++++++ .+.+.++.+.. + .|-++.++
T Consensus 146 ~~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~~~~~~~~~e~v~avR~~~g~d~~l~vDa----n----~~~~~~~a 217 (392)
T 3p3b_A 146 RAAVALMQEEAMQGYAKGQRHFKIKVGRGGRHMPLWEGTKRDIAIVRGISEVAGPAGKIMIDA----N----NAYNLNLT 217 (392)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCEEEECCHHHHTSCHHHHHHHHHHHHHHHHHHHCTTCCEEEEC----T----TCCCHHHH
T ss_pred cchHHHHHHHHHHHHHhCCCEEEECcCcCcccCCccccHHHHHHHHHHHHHHhCCCCeEEEEC----C----CCCCHHHH
Confidence 3445566667777777888877442111 34666677777777 45567777533 2 45678888
Q ss_pred HHHhhcC--CCceEEEEcCCChhhhHHHHHHHHhh-----CCCcEEE
Q 021144 234 ASIADSC--EQVVAVGINCTSPRFIHGLILSVRKV-----TSKPVII 273 (317)
Q Consensus 234 ~~~~~~~--~~~~aiGvNC~~p~~~~~~l~~l~~~-----~~~pl~v 273 (317)
++.+... .++..|==-| | .-...++.+++. ++.||..
T Consensus 218 i~~~~~l~~~~i~~iE~P~--~-~d~~~~~~l~~~l~~~g~~iPIa~ 261 (392)
T 3p3b_A 218 KEVLAALSDVNLYWLEEAF--H-EDEALYEDLKEWLGQRGQNVLIAD 261 (392)
T ss_dssp HHHHHHTTTSCEEEEECSS--S-CCHHHHHHHHHHHHHHTCCCEEEE
T ss_pred HHHHHHHHhcCCCEEecCC--c-ccHHHHHHHHHhhccCCCCccEEe
Confidence 7776542 2333322222 2 223455666666 6788754
No 494
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=27.07 E-value=3.7e+02 Score=24.71 Aligned_cols=99 Identities=14% Similarity=0.077 Sum_probs=55.7
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEeccC------------------------CCHHHHHHHHHHHHH-hCCCccEEEE
Q 021144 161 VSLETLKEFHRRRVLILANSGADLIAFETI------------------------PNKLEAKAYAELLEE-EGITIPAWFS 215 (317)
Q Consensus 161 ~s~~el~~~h~~qi~~l~~~gvD~l~~ET~------------------------p~~~Ea~a~~~~~~~-~~~~~pv~iS 215 (317)
.+.+++ .++++...+.|.|.|=+=-. .++++...+++++++ .+.+.++.+.
T Consensus 149 ~~~~~~----~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~~~~~~~~~GG~~~~~~~~~~~e~v~avR~a~G~d~~l~vD 224 (410)
T 2gl5_A 149 VTPEEY----AEAARAALDDGYDAIKVDPLEIDRNGDDCVFQNRNRNYSGLLLADQLKMGEARIAAMREAMGDDADIIVE 224 (410)
T ss_dssp CSHHHH----HHHHHHHHHTTCSEEEECSSSBCTTSCBTTTSSCCGGGGSCCCHHHHHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred CCHHHH----HHHHHHHHHcCCCEEEEeccccCCcccccccccccccccCccchhHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 355554 34555566778887754321 134666677788877 4556777653
Q ss_pred EEEcCCCcccCCCcHHHHHHHhhcC--CCceEEEEcCCChhhhHHHHHHHHhhCCCcEEE
Q 021144 216 FNSKDGINVVSGDSILECASIADSC--EQVVAVGINCTSPRFIHGLILSVRKVTSKPVII 273 (317)
Q Consensus 216 f~~~~~~~l~~G~~l~~a~~~~~~~--~~~~aiGvNC~~p~~~~~~l~~l~~~~~~pl~v 273 (317)
. + .|-+++++++.+... .++..|=--| .++. ...++.+++.++.||+.
T Consensus 225 a----n----~~~~~~~ai~~~~~l~~~~i~~iE~P~-~~~~-~~~~~~l~~~~~iPIa~ 274 (410)
T 2gl5_A 225 I----H----SLLGTNSAIQFAKAIEKYRIFLYEEPI-HPLN-SDNMQKVSRSTTIPIAT 274 (410)
T ss_dssp C----T----TCSCHHHHHHHHHHHGGGCEEEEECSS-CSSC-HHHHHHHHHHCSSCEEE
T ss_pred C----C----CCCCHHHHHHHHHHHHhcCCCeEECCC-Chhh-HHHHHHHHhhCCCCEEe
Confidence 3 2 456788877666431 2333332222 2222 34566777777788754
No 495
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=27.02 E-value=2.3e+02 Score=23.83 Aligned_cols=65 Identities=15% Similarity=0.139 Sum_probs=34.8
Q ss_pred HHHHHHhCCCCEEEeccCC------CHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEE
Q 021144 173 RVLILANSGADLIAFETIP------NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAV 246 (317)
Q Consensus 173 qi~~l~~~gvD~l~~ET~p------~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~ai 246 (317)
.++...++|+|++-|--.| +.++++.+.+.+... -.+|- +.++ .+++++.+.+.. .+++.|
T Consensus 13 da~~a~~~GaD~iGfif~~~SpR~V~~~~a~~i~~~~~~~--~~~Vg--Vfvn--------~~~~~i~~~~~~-~~ld~v 79 (203)
T 1v5x_A 13 DALLAEALGAFALGFVLAPGSRRRIAPEAARAIGEALGPF--VVRVG--VFRD--------QPPEEVLRLMEE-ARLQVA 79 (203)
T ss_dssp HHHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHHSCSS--SEEEE--EESS--------CCHHHHHHHHHH-TTCSEE
T ss_pred HHHHHHHcCCCEEEEEecCCCCCcCCHHHHHHHHHhCCCC--CCEEE--EEeC--------CCHHHHHHHHHh-hCCCEE
Confidence 3556777899999877544 455565554433211 12333 3222 235555555554 356666
Q ss_pred EEcC
Q 021144 247 GINC 250 (317)
Q Consensus 247 GvNC 250 (317)
-+.=
T Consensus 80 QLHG 83 (203)
T 1v5x_A 80 QLHG 83 (203)
T ss_dssp EECS
T ss_pred EECC
Confidence 6653
No 496
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=27.00 E-value=3.1e+02 Score=23.83 Aligned_cols=116 Identities=16% Similarity=0.103 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEE
Q 021144 168 EFHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVG 247 (317)
Q Consensus 168 ~~h~~qi~~l~~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiG 247 (317)
+.|.+.++.|.+.|..++++ .....|...+-+..+... .+ . +...+++.+.+..+.. .+.+=
T Consensus 197 ~~~~~l~~~L~~~~~~vvl~--~g~~~e~~~~~~i~~~~~---~~--~--------l~g~~sl~el~ali~~---a~l~I 258 (326)
T 2gt1_A 197 EHWRELIGLLADSGIRIKLP--WGAPHEEERAKRLAEGFA---YV--E--------VLPKMSLEGVARVLAG---AKFVV 258 (326)
T ss_dssp HHHHHHHHHTTTTCCEEEEC--CSSHHHHHHHHHHHTTCT---TE--E--------ECCCCCHHHHHHHHHT---CSEEE
T ss_pred HHHHHHHHHHHHCCCcEEEe--cCCHHHHHHHHHHHhhCC---cc--c--------ccCCCCHHHHHHHHHh---CCEEE
Confidence 45666777776667777764 445666444333332211 12 2 2234688999988875 35666
Q ss_pred EcCCChhhhHHHHHHHHhhCCCc-EEEEeCCC----Ccccccccccccc----CCCChhhHHHHHHHHHH
Q 021144 248 INCTSPRFIHGLILSVRKVTSKP-VIIYPNSG----ETYNAELKKWVVS----FSLHFFPLELILNPFAS 308 (317)
Q Consensus 248 vNC~~p~~~~~~l~~l~~~~~~p-l~vyPNaG----~~~d~~~~~w~~~----~~~~~~~~~~~~~~w~~ 308 (317)
-|.|+|-|+..+ .++| +++|...- .+|.......... ...++++..+.+.++++
T Consensus 259 ~~DSG~~HlAaa-------~g~P~v~lfg~t~p~~~~P~~~~~~~~~~~~~cm~~I~~~~V~~~i~~~l~ 321 (326)
T 2gt1_A 259 SVDTGLSHLTAA-------LDRPNITVYGPTDPGLIGGYGKNQMVCRAPGNELSQLTANAVKQFIEENAE 321 (326)
T ss_dssp EESSHHHHHHHH-------TTCCEEEEESSSCHHHHCCCSSSEEEEECGGGCGGGCCHHHHHHHHHHTTT
T ss_pred ecCCcHHHHHHH-------cCCCEEEEECCCChhhcCCCCCCceEecCCcccccCCCHHHHHHHHHHHHH
Confidence 778888887665 4678 56775442 1232211111001 24678888888777664
No 497
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0
Probab=26.87 E-value=3.6e+02 Score=24.52 Aligned_cols=172 Identities=14% Similarity=0.167 Sum_probs=86.3
Q ss_pred ccCCChHHHHHHHHHHHHh----hccccccccccccHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCC
Q 021144 49 CLVSSPHLVRKVHLDYLDA----GANIIITASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFT 124 (317)
Q Consensus 49 ~ll~~Pe~V~~iH~~Yl~A----GAdiI~TnTy~as~~~l~~~g~~~~~~~~l~~~av~lAr~A~~~~~~~~~~~~~~~~ 124 (317)
.++..++.++++-++|++- |..-++. +.++......|++.+++-+.+.++++-+ ..++.
T Consensus 71 ~vl~~~e~~~~~~~~~l~~~~~dgV~y~Ei---r~~P~~~~~~gl~~~~~v~~v~~~~~~a---~~~~g----------- 133 (343)
T 3rys_A 71 AVLQTEQDFTDMTRAYLERAAAGGVRHAEI---MMDPQAHTSRGVALETCVNGVANALATS---EEDFG----------- 133 (343)
T ss_dssp GGCCSHHHHHHHHHHHHHHHHHTTEEEEEE---EECHHHHHTTTCCHHHHHHHHHHHHTTH---HHHHS-----------
T ss_pred HHhCCHHHHHHHHHHHHHHHHHCCCEEEEE---EecHHHhccCCCCHHHHHHHHHHHHHHH---hhcCc-----------
Confidence 3567788888877777653 3222222 3456666677898665555444555443 33220
Q ss_pred CCCCCCCCCeEEEEeeCCCcCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHh--CCCCEEEeccCCCHHHHHHHHHH
Q 021144 125 GSGRISSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILAN--SGADLIAFETIPNKLEAKAYAEL 202 (317)
Q Consensus 125 ~~~~~~~~~~~VagsiGP~g~~l~~gseY~g~y~~~~s~~el~~~h~~qi~~l~~--~gvD~l~~ET~p~~~Ea~a~~~~ 202 (317)
-.-.+|...+- ..+.++..+..+..++ +-+ .|+|+.--|.-....+.+.+.+.
T Consensus 134 ------i~~~lI~~~~R------------------~~~~~~a~~~l~~a~~-~~~~vvG~dL~g~E~~~~~~~~~~~~~~ 188 (343)
T 3rys_A 134 ------VSTLLIAAFLR------------------DMSEDSALEVLDQLLA-MHAPIAGIGLDSAEVGNPPSKFERLYQR 188 (343)
T ss_dssp ------CEEEEEEEEET------------------TSCHHHHHHHHHHHHH-TTCCCCEEEEESCCTTCCGGGGHHHHHH
T ss_pred ------eeEEEEEEeCC------------------CCCHHHHHHHHHHHHh-CCCCEEEEecCCcccCCCHHHHHHHHHH
Confidence 00112222111 1244444444333222 211 34577777877777888888888
Q ss_pred HHHhCCCccEEEEEEEcCCCcccCCCcHHHHHHHhhcCCCceEEEEcCCC-hhhhHHHHHHHHhhCCCcEEEEeC
Q 021144 203 LEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTS-PRFIHGLILSVRKVTSKPVIIYPN 276 (317)
Q Consensus 203 ~~~~~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~~~~~~aiGvNC~~-p~~~~~~l~~l~~~~~~pl~vyPN 276 (317)
+++.+ +|+.+.. .. ..+-..+.+++..+. ..-.+-|+++.. |+ +++.+++. +.++.+-|-
T Consensus 189 A~~~g--l~~~~Ha--gE---~~~~~~i~~al~~lg--~~rIgHgv~l~~d~~----l~~~l~~~-~i~le~cP~ 249 (343)
T 3rys_A 189 AAEAG--LRRIAHA--GE---EGPASYITEALDVLH--VERIDHGIRCMEDTD----VVQRLVAE-QVPLTVCPL 249 (343)
T ss_dssp HHHTT--CEEEEEE--SS---SSCHHHHHHHHHTSC--CSEEEECGGGGGCHH----HHHHHHHH-TCCEEECHH
T ss_pred HHHCC--CeEEEee--CC---CCCHHHHHHHHhcCC--cceeeeeeeecCChH----HHHHHHhc-CCCeeEchh
Confidence 88876 7755444 22 111122333333221 223455566652 43 34444432 566666663
No 498
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=26.81 E-value=1e+02 Score=28.05 Aligned_cols=45 Identities=11% Similarity=0.157 Sum_probs=30.2
Q ss_pred HHHHHHHHHHhCCCCEEEecc--CCCHHHHHHHHHHHHHhCCCccEEEEE
Q 021144 169 FHRRRVLILANSGADLIAFET--IPNKLEAKAYAELLEEEGITIPAWFSF 216 (317)
Q Consensus 169 ~h~~qi~~l~~~gvD~l~~ET--~p~~~Ea~a~~~~~~~~~~~~pv~iSf 216 (317)
.|.+.+..++++|.++|. |- -.+++|++.+++++++.+ +++++.+
T Consensus 77 ~H~~~~~~al~aGkhVl~-EKP~a~~~~ea~~l~~~a~~~g--~~~~v~~ 123 (362)
T 3fhl_A 77 THYEYAGMALEAGKNVVV-EKPFTSTTKQGEELIALAKKKG--LMLSVYQ 123 (362)
T ss_dssp GHHHHHHHHHHTTCEEEE-ESSCCSSHHHHHHHHHHHHHHT--CCEEEEC
T ss_pred HHHHHHHHHHHCCCeEEE-ecCCCCCHHHHHHHHHHHHHcC--CEEEEEe
Confidence 366777777778876554 62 247888888888777765 5565544
No 499
>2j66_A BTRK, decarboxylase; butirosin, AHBA biosynthesis, lyase; HET: PLP; 1.65A {Bacillus circulans}
Probab=26.74 E-value=3.8e+02 Score=24.71 Aligned_cols=70 Identities=21% Similarity=0.098 Sum_probs=42.3
Q ss_pred hCCCCEEEeccCCCHHHHHHHHHHHHHhCCCccEEEEEEEcCC----------CcccCCCcHHH---HHHHhhcCCCceE
Q 021144 179 NSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDG----------INVVSGDSILE---CASIADSCEQVVA 245 (317)
Q Consensus 179 ~~gvD~l~~ET~p~~~Ea~a~~~~~~~~~~~~pv~iSf~~~~~----------~~l~~G~~l~~---a~~~~~~~~~~~a 245 (317)
+.++-.+.++ +..|++.+.+.+++.+...+|++-+....+ ...+-|.+.++ +++.+....++..
T Consensus 105 ~~~v~~~~vd---s~~el~~l~~~a~~~~~~~~V~lrvn~g~~~~~~~~~~~~~~srfG~~~~e~~~~~~~~~~~~~l~l 181 (428)
T 2j66_A 105 QSGIYCIIAE---SVEELFYIEELAEKENKTARVAIRINPDKSFGSTAIKMGGVPRQFGMDESMLDAVMDAVRSLQFTKF 181 (428)
T ss_dssp HHTCSEEEEC---SHHHHHHHHHHHHHHTCCEEEEEEEECSSCC--CCCSSSCCCCSSSEEGGGHHHHHHHHHHCTTEEE
T ss_pred HCCCCEEEEC---CHHHHHHHHHHHHhhCCCceEEEEEcCCCCCCCCccccCCCCCCCCCCHHHHHHHHHHHHhCCCCCE
Confidence 3565455444 788888888777776644667777765321 01345655544 4444545457778
Q ss_pred EEEcCC
Q 021144 246 VGINCT 251 (317)
Q Consensus 246 iGvNC~ 251 (317)
.|+-|.
T Consensus 182 ~Gl~~H 187 (428)
T 2j66_A 182 IGIHVY 187 (428)
T ss_dssp EEEECC
T ss_pred EEEEEE
Confidence 888774
No 500
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=26.67 E-value=3e+02 Score=25.31 Aligned_cols=93 Identities=10% Similarity=-0.022 Sum_probs=55.6
Q ss_pred HHHHHHHHhCCCCEEEeccC-CCHHHHHHHHHHHHHh-CCCccEEEEEEEcCCCcccCCCcHHHHHHHhhc--CCCceEE
Q 021144 171 RRRVLILANSGADLIAFETI-PNKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILECASIADS--CEQVVAV 246 (317)
Q Consensus 171 ~~qi~~l~~~gvD~l~~ET~-p~~~Ea~a~~~~~~~~-~~~~pv~iSf~~~~~~~l~~G~~l~~a~~~~~~--~~~~~ai 246 (317)
.++++.+.+.|.|.|=+-.= +++++...+++++++. +.+.++.+-. + .|-+++++++.+.. ..+++.|
T Consensus 167 ~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~avg~d~~l~vDa----n----~~~~~~~a~~~~~~l~~~~i~~i 238 (393)
T 2og9_A 167 MVNASASIERGIGGIKLKVGQPDGALDIARVTAVRKHLGDAVPLMVDA----N----QQWDRPTAQRMCRIFEPFNLVWI 238 (393)
T ss_dssp HHHHHHHHHTTCCCEEEECCCSCHHHHHHHHHHHHHHHCTTSCEEEEC----T----TCCCHHHHHHHHHHHGGGCCSCE
T ss_pred HHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHHcCCCCEEEEEC----C----CCCCHHHHHHHHHHHHhhCCCEE
Confidence 34566666788887755321 3677778888888875 5567876632 2 46678887766542 1234333
Q ss_pred EEcCCChhhhHHHHHHHHhhCCCcEEE
Q 021144 247 GINCTSPRFIHGLILSVRKVTSKPVII 273 (317)
Q Consensus 247 GvNC~~p~~~~~~l~~l~~~~~~pl~v 273 (317)
==-| .+.. ...++.+++.++.|++.
T Consensus 239 E~P~-~~~~-~~~~~~l~~~~~iPIa~ 263 (393)
T 2og9_A 239 EEPL-DAYD-HEGHAALALQFDTPIAT 263 (393)
T ss_dssp ECCS-CTTC-HHHHHHHHHHCSSCEEE
T ss_pred ECCC-Cccc-HHHHHHHHHhCCCCEEe
Confidence 2222 2222 34566777777888754
Done!