BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021147
(317 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224069876|ref|XP_002303066.1| predicted protein [Populus trichocarpa]
gi|222844792|gb|EEE82339.1| predicted protein [Populus trichocarpa]
Length = 575
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/316 (62%), Positives = 224/316 (70%), Gaps = 33/316 (10%)
Query: 35 EGSRDSWDSL---VDQRRRDAVFREVLQSYDQLRTRIGSLTDAKNKILSYTPGAWIENVG 91
EGSR L +Q++ +REVLQSYDQL+ R SL + K+KILSYTPG W+ENV
Sbjct: 84 EGSRIPSSFLELQANQKKASTAYREVLQSYDQLKDRSKSLEEGKSKILSYTPGGWMENVI 143
Query: 92 GMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYF 151
GM LSD+DVP TT LL+IGPKGSGKSSL+NRISKVFE+DKFASERAQV+YNSS DGTYF
Sbjct: 144 GMKLSDFDVPNTTVLLVIGPKGSGKSSLINRISKVFEDDKFASERAQVSYNSSAADGTYF 203
Query: 152 LQEYTIPR------------------------------GVRHGELVIRRSDSSSLRNRMR 181
LQEY IPR GV H EL+IR SD+S LRN+M+
Sbjct: 204 LQEYMIPRSSSSFCLYDTRGLSYDSYDSANMLKNWITKGVHHRELIIRPSDNSHLRNQMK 263
Query: 182 CKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEGDSDVEKQYNQIVATTFNCPYLSFRDD 241
CKA GC+ R V FVIFVVDGLAVLKSM+ D K+Y Q++A TF+CPY+SF DD
Sbjct: 264 CKARGNGCQSKETRMVTFVIFVVDGLAVLKSMDNLVDEGKKYTQMIAKTFDCPYISFNDD 323
Query: 242 KPVVVVTHGDLLSLTDRARIRTYLGELLGIPPAKQIFDIPESSDPENELIIVDMLRYCLE 301
KPVVVVTHGDLLSL DRAR+R +LGELLGIPPAKQIFDIPES DP EL IV+ML Y LE
Sbjct: 324 KPVVVVTHGDLLSLNDRARVRVHLGELLGIPPAKQIFDIPESHDPVTELTIVNMLHYSLE 383
Query: 302 HADRNLSCKSCARNKV 317
HAD+NL K KV
Sbjct: 384 HADKNLPHKRQIAKKV 399
>gi|255580517|ref|XP_002531083.1| ATP binding protein, putative [Ricinus communis]
gi|223529329|gb|EEF31297.1| ATP binding protein, putative [Ricinus communis]
Length = 419
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/334 (57%), Positives = 232/334 (69%), Gaps = 35/334 (10%)
Query: 9 RFFTPEGEEIISPV-DDFDIPLLSGDDEGSR----DSWDSLVDQRRRDAVFREVLQSYDQ 63
+ + P G+ + V +++ + ++ G R S + +QR++ F+E+LQSYDQ
Sbjct: 28 QLYHPSGKHDVERVNEEYGLAFGEFEEVGCRVLSPTSLEVEANQRKKWKAFKELLQSYDQ 87
Query: 64 LRTRIGSLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRI 123
LR+R SL +AK+KILSYTPG W E VGGM LSDY+VPKTT+LLL+GP+GSGKSSLVNRI
Sbjct: 88 LRSRAESLDEAKSKILSYTPGGWKEKVGGMKLSDYNVPKTTTLLLVGPRGSGKSSLVNRI 147
Query: 124 SKVFENDKFASERAQVTYNSSVGDGTYFLQEYTIP------------------------- 158
SKVF++DKFA ERAQV+YN S G+GTYFLQEY IP
Sbjct: 148 SKVFDDDKFAPERAQVSYNPSAGEGTYFLQEYMIPGCSTSFCLYDTRGFFDNSYDNIEML 207
Query: 159 -----RGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSM 213
RGV HGEL +R+ D SSLR RM+CK G + R VNFVIFVV+GLAVLKSM
Sbjct: 208 KYWMTRGVCHGELTVRKCDDSSLRTRMKCKVRYNGSQSKKNRTVNFVIFVVNGLAVLKSM 267
Query: 214 EGDSDVEKQYNQIVATTFNCPYLSFRDDKPVVVVTHGDLLSLTDRARIRTYLGELLGIPP 273
+ + QY ++A+ FNCPY SF+DDKPVVVVTHGDLLSL+DR RIR +LGELLGIPP
Sbjct: 268 GSEVEKGNQYTDMIASAFNCPYASFKDDKPVVVVTHGDLLSLSDRTRIRVHLGELLGIPP 327
Query: 274 AKQIFDIPESSDPENELIIVDMLRYCLEHADRNL 307
AKQIFDIPES DP EL I+DMLRY LEHAD NL
Sbjct: 328 AKQIFDIPESCDPVTELTIIDMLRYSLEHADNNL 361
>gi|225470035|ref|XP_002265228.1| PREDICTED: uncharacterized protein LOC100246086 [Vitis vinifera]
gi|297741779|emb|CBI33051.3| unnamed protein product [Vitis vinifera]
Length = 384
Score = 360 bits (923), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 185/301 (61%), Positives = 214/301 (71%), Gaps = 31/301 (10%)
Query: 47 QRRRDAVFREVLQSYDQLRTRIGSLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSL 106
QRRR V+ ++LQSYD +R R +L AK++ILSYTPGAWIE GGM SDY+VP+TTSL
Sbjct: 28 QRRRSLVYSQILQSYDDVRIRTNALEKAKSRILSYTPGAWIEMSGGMKFSDYNVPETTSL 87
Query: 107 LLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQEYTIPRG------ 160
+L+GPKGSGKSSL+N+IS+VFE+DKFA ERAQV+YN SVGDGTYFLQEY IPRG
Sbjct: 88 ILVGPKGSGKSSLINKISRVFEDDKFAPERAQVSYNLSVGDGTYFLQEYMIPRGSTSFCL 147
Query: 161 ------------------------VRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRK 196
VRHGEL IR SDS S+R RM+CKA + G S R
Sbjct: 148 YDTRGLSDVSSDNMQMLKHWITKGVRHGELAIRNSDSPSIRARMKCKARQSGYNSSKTRL 207
Query: 197 VNFVIFVVDGLAVLKSMEGDSDVEKQ-YNQIVATTFNCPYLSFRDDKPVVVVTHGDLLSL 255
VNFVIFVV+GL+VLKS++ D Q Y Q +A F CPYLSFRDD PVVVVTHGDLLSL
Sbjct: 208 VNFVIFVVNGLSVLKSIDSCDDGASQFYIQTIAEMFCCPYLSFRDDMPVVVVTHGDLLSL 267
Query: 256 TDRARIRTYLGELLGIPPAKQIFDIPESSDPENELIIVDMLRYCLEHADRNLSCKSCARN 315
+DRAR+R +LGE LGI P KQIFDIPES EL I+DMLRY LEHADRNL CK +
Sbjct: 268 SDRARVRVHLGEHLGISPGKQIFDIPESCGKATELTIIDMLRYSLEHADRNLPCKGWFLD 327
Query: 316 K 316
K
Sbjct: 328 K 328
>gi|449464106|ref|XP_004149770.1| PREDICTED: uncharacterized protein LOC101208586 [Cucumis sativus]
gi|449520910|ref|XP_004167475.1| PREDICTED: uncharacterized protein LOC101225331 [Cucumis sativus]
Length = 436
Score = 349 bits (896), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 179/308 (58%), Positives = 217/308 (70%), Gaps = 31/308 (10%)
Query: 33 DDEGSRDSWDSLVDQRRRDAVFREVLQSYDQLRTRIGSLTDAKNKILSYTPGAWIENVGG 92
+ E S + D + + RR+ V RE+++SYDQLR R +L AK KILSY+PGAWIE VGG
Sbjct: 67 ESEYSSAALDVDICRMRRNRVHREIIESYDQLRIRSENLNQAKQKILSYSPGAWIEQVGG 126
Query: 93 MTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFL 152
M LSDYD+P+TTSL+LIGPKGSGKSSL+NRISKVFE D FA ERAQV+ NSS DGT+FL
Sbjct: 127 MKLSDYDIPQTTSLILIGPKGSGKSSLINRISKVFEEDHFAPERAQVSCNSSGEDGTFFL 186
Query: 153 QEYTIPR------------------------------GVRHGELVIRRSDSSSLRNRMRC 182
EY I R GV HG+LV R+SD+SSL NRMRC
Sbjct: 187 HEYMILRKSKSFCLYDTRGLSNDPSDNIEMLKQWMSKGVHHGKLVTRKSDASSLINRMRC 246
Query: 183 KAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEGDSDVEKQYNQIVATTFNCPYLSFRDDK 242
KA + V+R +NFVIFVVDGL+VLKS++GD D +K Y++++ T FNCPYLS+ DDK
Sbjct: 247 KARQSFPRSRVVRIINFVIFVVDGLSVLKSIDGD-DKQKDYDRVITTAFNCPYLSYGDDK 305
Query: 243 PVVVVTHGDLLSLTDRARIRTYLGELLGIPPAKQIFDIPESSDPENELIIVDMLRYCLEH 302
PVVV+THGDLLS + R+R +LG LLGIP KQIFDIP+ DP EL I+DML YCLEH
Sbjct: 306 PVVVLTHGDLLSFAENVRVRGHLGNLLGIPSTKQIFDIPDRYDPVTELTIIDMLHYCLEH 365
Query: 303 ADRNLSCK 310
AD+NL K
Sbjct: 366 ADKNLPPK 373
>gi|356567802|ref|XP_003552104.1| PREDICTED: uncharacterized protein LOC100783278 [Glycine max]
Length = 429
Score = 321 bits (822), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 164/308 (53%), Positives = 204/308 (66%), Gaps = 32/308 (10%)
Query: 42 DSLVDQRRRDAVFREVLQSYDQLRTRIGSLTDAKNKILSYTPGAWIENVGGMTLSDYDVP 101
D V++RRR ++E+LQ D+L+ L K KIL Y PGAWIE GG+ +SDYDVP
Sbjct: 67 DFEVNERRRVINYQEILQCCDELKIHSKDLKREKQKILRYKPGAWIEKAGGLKISDYDVP 126
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQEYTIPR-- 159
KTT LLL+GP+GSGKSSL+NRISKV E+D+FA RAQ +YNS +GDGT FLQEY IPR
Sbjct: 127 KTTCLLLVGPRGSGKSSLINRISKVVEDDRFAPARAQESYNSLLGDGTSFLQEYMIPRYS 186
Query: 160 ------------------------------GVRHGELVIRRSDSSSLRNRMRCKAHKIGC 189
GV HGELV+R++D+ LR ++ KAHK G
Sbjct: 187 NSICLYDTRSLSDNSEKDENIRMLKSWMTKGVHHGELVVRKTDNQRLRKSLKGKAHKKGY 246
Query: 190 EPSVIRKVNFVIFVVDGLAVLKSMEGDSDVEKQYNQIVATTFNCPYLSFRDDKPVVVVTH 249
S RKVNFVI+VV+GL VLK+ME D +E Q Q + +TFNCP+LSF+DDKPV+V TH
Sbjct: 247 LSSKTRKVNFVIYVVNGLLVLKAMENDGALETQCVQSIVSTFNCPFLSFKDDKPVLVFTH 306
Query: 250 GDLLSLTDRARIRTYLGELLGIPPAKQIFDIPESSDPENELIIVDMLRYCLEHADRNLSC 309
GDLLS ++RA +R +LG LLGIPP KQIFDIP+ P E I+ MLRY L HADR+
Sbjct: 307 GDLLSFSERALVREHLGTLLGIPPTKQIFDIPDCDCPATESAIIGMLRYSLAHADRHFPQ 366
Query: 310 KSCARNKV 317
+S +KV
Sbjct: 367 RSKVMDKV 374
>gi|357505167|ref|XP_003622872.1| hypothetical protein MTR_7g055730 [Medicago truncatula]
gi|355497887|gb|AES79090.1| hypothetical protein MTR_7g055730 [Medicago truncatula]
Length = 487
Score = 318 bits (815), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 167/307 (54%), Positives = 210/307 (68%), Gaps = 33/307 (10%)
Query: 44 LVDQRRRDAVFREVLQSYDQLRTRIGSLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKT 103
+V +R+R ++++E+LQSYD+L+ SL AK KIL Y PG WIE G+ L DYDVP+T
Sbjct: 65 VVGERKRLSIYQEILQSYDELKIDSISLKQAKEKILRYRPGTWIEKARGLKLRDYDVPET 124
Query: 104 TSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQEYTIPR---- 159
TSL+L+GP GSGKSSL+NRISKVF++DKFA RAQV+YNS GDGTYFL+E+ IPR
Sbjct: 125 TSLILVGPSGSGKSSLINRISKVFDDDKFAPTRAQVSYNSLRGDGTYFLREHMIPRDSNS 184
Query: 160 --------------------------GVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSV 193
GV HGELVIR D+ +L ++CK +K G S
Sbjct: 185 ICLYDTRSLSNKSHENNEMLKNWMTEGVHHGELVIRSKDNQTLTESLKCKGNKKGFFSSK 244
Query: 194 IRKVNFVIFVVDGLAVLKSME-GDSDVEKQY-NQIVAT-TFNCPYLSFRDDKPVVVVTHG 250
RKVNFVI+V++GL+VL ME D + +Y +IV+T FN P+LSF+DDKPV+V+THG
Sbjct: 245 SRKVNFVIYVLNGLSVLNMMENADGAFKARYIEEIVSTFNFNNPFLSFKDDKPVLVLTHG 304
Query: 251 DLLSLTDRARIRTYLGELLGIPPAKQIFDIPESSDPENELIIVDMLRYCLEHADRNLSCK 310
DLLSL+DRAR+R YLGE+LGIPP KQIFDIPE D E I+ MLRY LEHAD N+ K
Sbjct: 305 DLLSLSDRARVRVYLGEVLGIPPTKQIFDIPECDDLVTESAIIGMLRYTLEHADNNIPQK 364
Query: 311 SCARNKV 317
+ NKV
Sbjct: 365 TNVMNKV 371
>gi|357505165|ref|XP_003622871.1| hypothetical protein MTR_7g055720 [Medicago truncatula]
gi|355497886|gb|AES79089.1| hypothetical protein MTR_7g055720 [Medicago truncatula]
Length = 475
Score = 314 bits (805), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 166/326 (50%), Positives = 210/326 (64%), Gaps = 31/326 (9%)
Query: 23 DDFDIPLLSGDDEGSRDSWDSLVDQRRRDAVFREVLQSYDQLRTRIGSLTDAKNKILSYT 82
++ D +S + + + DS++ +R+R +++E+LQSYD L+ +L +AK KILSY
Sbjct: 50 NELDFGEVSEESVATSSAADSVIGERKRLGIYQEILQSYDALKIDSKNLKEAKEKILSYR 109
Query: 83 PGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYN 142
PG W E G+ L DYDVP+TT LLL+GP GSGKSSL+NRISKVF+ DKFA RAQV+YN
Sbjct: 110 PGTWTEKAKGLKLCDYDVPETTCLLLVGPSGSGKSSLINRISKVFDEDKFAPARAQVSYN 169
Query: 143 SSVGDGTYFLQEYTIPR------------------------------GVRHGELVIRRSD 172
S G+GT FL+EY IPR GVRHGELV R D
Sbjct: 170 SIRGNGTCFLREYMIPRDSNSICLYDTRSLSDDSHENNKMLKNWMTKGVRHGELVARGMD 229
Query: 173 SSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSME-GDSDVEKQYNQIVATTF 231
L ++ K K G S RKVN+VI V++GL+VL +E +E+ Y Q + +TF
Sbjct: 230 DKRLSKNLKLKGDKKGFFSSKSRKVNYVICVLNGLSVLNVIENAGGALEEWYIQQIVSTF 289
Query: 232 NCPYLSFRDDKPVVVVTHGDLLSLTDRARIRTYLGELLGIPPAKQIFDIPESSDPENELI 291
NCP+LSF+DDKPV+V+THGDLLSL+DRAR+R YLGELLGIPP KQIFDIP+ D E
Sbjct: 290 NCPFLSFKDDKPVLVLTHGDLLSLSDRARVRAYLGELLGIPPTKQIFDIPDCDDLVTESA 349
Query: 292 IVDMLRYCLEHADRNLSCKSCARNKV 317
IV MLRY LEHAD N KS NK+
Sbjct: 350 IVGMLRYTLEHADGNFPQKSNVMNKI 375
>gi|388500938|gb|AFK38535.1| unknown [Medicago truncatula]
Length = 474
Score = 314 bits (804), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 166/326 (50%), Positives = 210/326 (64%), Gaps = 31/326 (9%)
Query: 23 DDFDIPLLSGDDEGSRDSWDSLVDQRRRDAVFREVLQSYDQLRTRIGSLTDAKNKILSYT 82
++ D +S + + + DS++ +R+R +++E+LQSYD L+ +L +AK KILSY
Sbjct: 50 NELDFGEVSEESVATSSAADSVIGERKRLGIYQEILQSYDALKIDSKNLKEAKEKILSYR 109
Query: 83 PGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYN 142
PG W E G+ L DYDVP+TT LLL+GP GSGKSSL+NRISKVF+ DKFA RAQV+YN
Sbjct: 110 PGTWTEKAKGLKLCDYDVPETTCLLLVGPSGSGKSSLINRISKVFDEDKFAPARAQVSYN 169
Query: 143 SSVGDGTYFLQEYTIPR------------------------------GVRHGELVIRRSD 172
S G+GT FL+EY IPR GVRHGELV R D
Sbjct: 170 SIRGNGTCFLREYMIPRDSNSICLYDTRSLSDDSHENNKMLKNWMTKGVRHGELVARGMD 229
Query: 173 SSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSME-GDSDVEKQYNQIVATTF 231
L ++ K K G S RKVN+VI V++GL+VL +E +E+ Y Q + +TF
Sbjct: 230 DKRLSKNLKLKGDKKGFFSSKSRKVNYVICVLNGLSVLNVIENAGGALEEWYIQQIVSTF 289
Query: 232 NCPYLSFRDDKPVVVVTHGDLLSLTDRARIRTYLGELLGIPPAKQIFDIPESSDPENELI 291
NCP+LSF+DDKPV+V+THGDLLSL+DRAR+R YLGELLGIPP KQIFDIP+ D E
Sbjct: 290 NCPFLSFKDDKPVLVLTHGDLLSLSDRARVRAYLGELLGIPPTKQIFDIPDCDDLVTESA 349
Query: 292 IVDMLRYCLEHADRNLSCKSCARNKV 317
IV MLRY LEHAD N KS NK+
Sbjct: 350 IVGMLRYTLEHADGNFPQKSNVMNKI 375
>gi|297790788|ref|XP_002863279.1| hypothetical protein ARALYDRAFT_497092 [Arabidopsis lyrata subsp.
lyrata]
gi|297309113|gb|EFH39538.1| hypothetical protein ARALYDRAFT_497092 [Arabidopsis lyrata subsp.
lyrata]
Length = 479
Score = 271 bits (694), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 148/299 (49%), Positives = 193/299 (64%), Gaps = 45/299 (15%)
Query: 42 DSLVDQRRRDAVFREVLQSYD-QLRTRIGSLTDAKNKILSYTPGAWIENVGGMTLSDYDV 100
+ + D RRR+ ++E+LQSYD LR+ L A+N+IL YTPG+W + + LSDYDV
Sbjct: 47 NHVTDLRRREKSYQEILQSYDVLLRSSKRKLRQARNEILRYTPGSWSD----VKLSDYDV 102
Query: 101 PKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQEYTIPRG 160
PKTTS++L+GPKG+GKSSLVN+IS+V E+D+F RAQ ++ + GT+F+QEY IPRG
Sbjct: 103 PKTTSIMLVGPKGAGKSSLVNKISRVIEDDEFFPARAQESFGTQSKGGTFFVQEYMIPRG 162
Query: 161 --------------------------------VRHGELVIRRSDSSSLRNRMRCKAHKIG 188
V HGE VI SDSS L++R+ + G
Sbjct: 163 GSASFCLYDTRGLSHISSSDNTRMIEQWMTKGVHHGEPVIWTSDSSDLKDRL-IRDGGTG 221
Query: 189 CEPSVIRKVNFVIFVVDGLAVLKSMEGDSDVEKQYNQIVATTFNCPYLSFRDDKPVVVVT 248
E RKVN VIFV++ + +LKSME E Y +++T FNCP LSF+DDKP VV+T
Sbjct: 222 YER---RKVNSVIFVINAVEILKSME----CETSYAHMISTAFNCPLLSFKDDKPAVVMT 274
Query: 249 HGDLLSLTDRARIRTYLGELLGIPPAKQIFDIPESSDPENELIIVDMLRYCLEHADRNL 307
HGD+LSL DRAR+R +LGELLGIPPAKQIFDIPES D L I ++L Y L+HAD+N
Sbjct: 275 HGDMLSLEDRARVRVFLGELLGIPPAKQIFDIPESRDIATALTICNLLCYSLDHADKNF 333
>gi|42566738|ref|NP_193039.3| P-loop containing nucleoside triphosphate hydrolase
domain-containing protein [Arabidopsis thaliana]
gi|332657819|gb|AEE83219.1| P-loop containing nucleoside triphosphate hydrolase
domain-containing protein [Arabidopsis thaliana]
Length = 481
Score = 254 bits (649), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 140/299 (46%), Positives = 188/299 (62%), Gaps = 45/299 (15%)
Query: 42 DSLVDQRRRDAVFREVLQSYDQL-RTRIGSLTDAKNKILSYTPGAWIENVGGMTLSDYDV 100
+ + D RRR+ ++E+LQS+D L RT L A+N+ILSYTPG+W + + LSDY++
Sbjct: 48 NHVTDLRRREKAYQEILQSHDLLLRTSKRKLRQARNEILSYTPGSWSD----VKLSDYNI 103
Query: 101 PKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQEYTIPRG 160
PKTTS++L+GPKG+GKSSLVN+I++V E+D F +RAQ ++ + GTYF+QEY I RG
Sbjct: 104 PKTTSIMLVGPKGAGKSSLVNKITRVIEDDAFLLDRAQESFGTPSKGGTYFVQEYMISRG 163
Query: 161 --------------------------------VRHGELVIRRSDSSSLRNRMRCKAHKIG 188
V HGE VI SDSS L++R+ + G
Sbjct: 164 GSASFCLYDTRGLSRISSSDNTSMIEQWMTRGVLHGEPVIWASDSSDLKDRL-IRDGGTG 222
Query: 189 CEPSVIRKVNFVIFVVDGLAVLKSMEGDSDVEKQYNQIVATTFNCPYLSFRDDKPVVVVT 248
E RKVN +IFVV+ + +LKSME E Y ++ T FN P L F+DDKP VV+T
Sbjct: 223 YER---RKVNSIIFVVNAVEILKSME----CETSYASMITTAFNSPILLFKDDKPAVVMT 275
Query: 249 HGDLLSLTDRARIRTYLGELLGIPPAKQIFDIPESSDPENELIIVDMLRYCLEHADRNL 307
HGD+LS +RAR+R +LGELLGIPP KQIFDIPES D + I ++L Y L+HAD+N
Sbjct: 276 HGDMLSREERARVRVFLGELLGIPPHKQIFDIPESRDTATAITICNLLCYSLQHADKNF 334
>gi|42570140|ref|NP_849371.2| P-loop containing nucleoside triphosphate hydrolase
domain-containing protein [Arabidopsis thaliana]
gi|332657820|gb|AEE83220.1| P-loop containing nucleoside triphosphate hydrolase
domain-containing protein [Arabidopsis thaliana]
Length = 479
Score = 254 bits (649), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 140/299 (46%), Positives = 188/299 (62%), Gaps = 45/299 (15%)
Query: 42 DSLVDQRRRDAVFREVLQSYDQL-RTRIGSLTDAKNKILSYTPGAWIENVGGMTLSDYDV 100
+ + D RRR+ ++E+LQS+D L RT L A+N+ILSYTPG+W + + LSDY++
Sbjct: 46 NHVTDLRRREKAYQEILQSHDLLLRTSKRKLRQARNEILSYTPGSWSD----VKLSDYNI 101
Query: 101 PKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQEYTIPRG 160
PKTTS++L+GPKG+GKSSLVN+I++V E+D F +RAQ ++ + GTYF+QEY I RG
Sbjct: 102 PKTTSIMLVGPKGAGKSSLVNKITRVIEDDAFLLDRAQESFGTPSKGGTYFVQEYMISRG 161
Query: 161 --------------------------------VRHGELVIRRSDSSSLRNRMRCKAHKIG 188
V HGE VI SDSS L++R+ + G
Sbjct: 162 GSASFCLYDTRGLSRISSSDNTSMIEQWMTRGVLHGEPVIWASDSSDLKDRL-IRDGGTG 220
Query: 189 CEPSVIRKVNFVIFVVDGLAVLKSMEGDSDVEKQYNQIVATTFNCPYLSFRDDKPVVVVT 248
E RKVN +IFVV+ + +LKSME E Y ++ T FN P L F+DDKP VV+T
Sbjct: 221 YER---RKVNSIIFVVNAVEILKSME----CETSYASMITTAFNSPILLFKDDKPAVVMT 273
Query: 249 HGDLLSLTDRARIRTYLGELLGIPPAKQIFDIPESSDPENELIIVDMLRYCLEHADRNL 307
HGD+LS +RAR+R +LGELLGIPP KQIFDIPES D + I ++L Y L+HAD+N
Sbjct: 274 HGDMLSREERARVRVFLGELLGIPPHKQIFDIPESRDTATAITICNLLCYSLQHADKNF 332
>gi|226502704|ref|NP_001150449.1| ATP binding protein [Zea mays]
gi|195639348|gb|ACG39142.1| ATP binding protein [Zea mays]
Length = 375
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 124/281 (44%), Positives = 165/281 (58%), Gaps = 37/281 (13%)
Query: 62 DQLRTRIGSLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVN 121
D +R L +AK I Y PG WIE VGG + +P+ T+LLL+GP+GSGKS+LVN
Sbjct: 50 DSIRYFNRQLREAKEFIRRYKPGDWIEGVGGAKAGHFVLPEVTTLLLVGPRGSGKSTLVN 109
Query: 122 RISKVF--ENDKFASERAQVTYNSSVGDGTYFLQEYTIPR-------------------- 159
RI++VF ++D FA +RAQV+ NS +GT FL+EY IPR
Sbjct: 110 RITRVFDKDDDPFAPDRAQVSCNSK-SNGTMFLREYPIPRNSSAVCIYDTRGWSNDLEKN 168
Query: 160 ----------GVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAV 209
G+ HGE + D + M+ + IRKVNFVIFVVDG+AV
Sbjct: 169 FKMLHQWMTKGISHGETTMWDDDEGNKIGNMKPLGRQYSFLRYKIRKVNFVIFVVDGVAV 228
Query: 210 LKSMEGDSDVEKQYNQIVATTFNCPYLSFRDDKPVVVVTHGDLLSLTDRARIRTYLGELL 269
L+SM+ D K Y +I+ TF P+LS DDKPVVVVTHGD LS+ R ++ L ELL
Sbjct: 229 LESMD---DSNKGYTEILRQTFMYPFLSIGDDKPVVVVTHGDRLSIQQRVHVQAELAELL 285
Query: 270 GIPPAKQIFDIPESSDPENELIIVDMLRYCLEHADRNLSCK 310
I PA+QI+DIP S D + ++ ++DML YC+ HA++NL K
Sbjct: 286 DI-PAQQIYDIPGSDDDQTDMAVLDMLHYCVRHAEQNLPVK 325
>gi|413941832|gb|AFW74481.1| ATP binding protein [Zea mays]
Length = 419
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 120/273 (43%), Positives = 162/273 (59%), Gaps = 37/273 (13%)
Query: 70 SLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVF-- 127
L +AK I Y PG WIE VG + +P+ T+LLL+GP+GSGKS+LVNRI++VF
Sbjct: 102 QLREAKEFIRRYKPGDWIEGVGSAKAGHFVLPEVTTLLLVGPRGSGKSTLVNRITRVFDK 161
Query: 128 ENDKFASERAQVTYNSSVGDGTYFLQEYTIPR---------------------------- 159
++D FA +RAQV+ NS +GT FL+EY IPR
Sbjct: 162 DDDPFAPDRAQVSCNSK-SNGTMFLREYPIPRNSSAVCIYDTRGWSNDLEKNFKMLHQWM 220
Query: 160 --GVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEGDS 217
G+ HGE + D + M+ + IRKVNFV+FVVDG+AVL+SM+
Sbjct: 221 TKGISHGETTMWDDDEGNKIGNMKPLGRQYSFLRYKIRKVNFVLFVVDGVAVLESMD--- 277
Query: 218 DVEKQYNQIVATTFNCPYLSFRDDKPVVVVTHGDLLSLTDRARIRTYLGELLGIPPAKQI 277
D K Y +I+ TF P+LS DDKPVVVVTHGD LS+ R ++ L ELL I PA+QI
Sbjct: 278 DSNKGYTEILRQTFMYPFLSIGDDKPVVVVTHGDRLSIQQRVHVQAELAELLDI-PAQQI 336
Query: 278 FDIPESSDPENELIIVDMLRYCLEHADRNLSCK 310
+DIP S D + +++++DML YC+ HA++NL K
Sbjct: 337 YDIPGSDDDQTDMVVLDMLHYCVRHAEQNLPVK 369
>gi|414869394|tpg|DAA47951.1| TPA: hypothetical protein ZEAMMB73_985826 [Zea mays]
Length = 341
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 114/262 (43%), Positives = 154/262 (58%), Gaps = 37/262 (14%)
Query: 81 YTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVF--ENDKFASERAQ 138
Y PG WIE VGG + +P+ T+LLL+GP+GS KS+LVNRI++VF ++D FA +RAQ
Sbjct: 35 YKPGDWIEGVGGAKAGHFVLPEVTTLLLVGPRGSVKSTLVNRITRVFDKDDDPFAPDRAQ 94
Query: 139 VTYNSSVGDGTYFLQEYTIPR------------------------------GVRHGELVI 168
V+ NS +GT FL+EY IPR G+ HGE +
Sbjct: 95 VSCNSQ-SNGTMFLREYPIPRNSSAVCIYDTRGWSNDLEKNFKMLHQWMTKGISHGETTM 153
Query: 169 RRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEGDSDVEKQYNQIVA 228
D + M+ + I KVNFVIFVVDG+AVL+SM+ D K Y +I+
Sbjct: 154 WDDDEGNKIGNMKPLGRQYSFLRYKIWKVNFVIFVVDGVAVLESMD---DSNKGYTEILR 210
Query: 229 TTFNCPYLSFRDDKPVVVVTHGDLLSLTDRARIRTYLGELLGIPPAKQIFDIPESSDPEN 288
TF P+LS DDKPVVVVTHGD LS+ R ++ L ELL I P +QI+DI S+D +
Sbjct: 211 QTFMYPFLSIGDDKPVVVVTHGDRLSIQQRVHVQAELAELLDI-PVQQIYDILGSNDDQT 269
Query: 289 ELIIVDMLRYCLEHADRNLSCK 310
++ ++DML YC+ HA++NL K
Sbjct: 270 DMAVLDMLHYCVRHAEQNLHVK 291
>gi|242078087|ref|XP_002443812.1| hypothetical protein SORBIDRAFT_07g002570 [Sorghum bicolor]
gi|241940162|gb|EES13307.1| hypothetical protein SORBIDRAFT_07g002570 [Sorghum bicolor]
Length = 394
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 125/326 (38%), Positives = 182/326 (55%), Gaps = 44/326 (13%)
Query: 19 ISPVDDFDIPLLSGDDEGSRDSWDSLVDQRRRDAV--FREVLQSYDQLRTRIGSLTDAKN 76
+SP+ D D DD D D++ ++ R+A F L+ + L + K
Sbjct: 34 VSPISDDDESCCVCDD----DEVDAIRCRQLREAKEHFNRQLREAKEFHFN-RQLREVKE 88
Query: 77 KILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFE--NDKFAS 134
I Y PG W+E VGG + +P+ T+LLL+GP+GSGKS+LVNRI++VF+ +D FA
Sbjct: 89 LIRRYKPGDWVEGVGGAKAGHFLLPEITTLLLVGPRGSGKSTLVNRITRVFDKDDDPFAP 148
Query: 135 ERAQVTYNSSVGDGTYFLQEYTIPR------------------------------GVRHG 164
+RAQV+ NS+ + T FL EY IPR G+ HG
Sbjct: 149 DRAQVSCNST-SNRTIFLHEYPIPRNSSAICIYDTCGWSNDPKKNFKMLHQWMTKGISHG 207
Query: 165 ELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEGDSDVEKQYN 224
E ++ +D + ++ + + RKVNFVIFVVDG+AVL+S++ ++ K Y
Sbjct: 208 ETIMWDNDEGNKTGGIKPLGRQYSFLRYITRKVNFVIFVVDGVAVLESIDSNN---KGYT 264
Query: 225 QIVATTFNCPYLSFRDDKPVVVVTHGDLLSLTDRARIRTYLGELLGIPPAKQIFDIPESS 284
+I+ TF P+LS DDKPVVVVTHGD LS+ A ++ L ELL I PA+QI+ IP S
Sbjct: 265 EILHQTFMYPFLSIGDDKPVVVVTHGDRLSIQQCAHVQNELTELLNI-PAQQIYAIPGSD 323
Query: 285 DPENELIIVDMLRYCLEHADRNLSCK 310
D + ++ ++DML YC+ A++NL K
Sbjct: 324 DFQTDMAVLDMLHYCVRRAEQNLPVK 349
>gi|33589692|gb|AAQ22612.1| At4g13030 [Arabidopsis thaliana]
Length = 372
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 108/233 (46%), Positives = 141/233 (60%), Gaps = 40/233 (17%)
Query: 107 LLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQEYTIPRG------ 160
+L+GPKG+GKSSLVN+I++V E+D F +RAQ ++ + GTYF+QEY I RG
Sbjct: 1 MLVGPKGAGKSSLVNKITRVIEDDAFLLDRAQESFGTPSKGGTYFVQEYMISRGGSASFC 60
Query: 161 --------------------------VRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVI 194
V HGE VI SDSS L++R+ + G E
Sbjct: 61 LYDTRGLSRISSSDNTSMIEQWMTRGVLHGEPVIWASDSSDLKDRL-IRDGGTGYER--- 116
Query: 195 RKVNFVIFVVDGLAVLKSMEGDSDVEKQYNQIVATTFNCPYLSFRDDKPVVVVTHGDLLS 254
RKVN +IFVV+ + +LKSME E Y ++ T FN P L F+DDKP VV+THGD+LS
Sbjct: 117 RKVNSIIFVVNAVEILKSME----CETSYASMITTAFNSPILLFKDDKPAVVMTHGDMLS 172
Query: 255 LTDRARIRTYLGELLGIPPAKQIFDIPESSDPENELIIVDMLRYCLEHADRNL 307
+RAR+R +LGELLGIPP KQIFDIPES D + I ++L Y L+HAD+N
Sbjct: 173 REERARVRVFLGELLGIPPHKQIFDIPESRDTATAITICNLLCYSLQHADKNF 225
>gi|115462943|ref|NP_001055071.1| Os05g0274300 [Oryza sativa Japonica Group]
gi|50878346|gb|AAT85121.1| unknown protein [Oryza sativa Japonica Group]
gi|113578622|dbj|BAF16985.1| Os05g0274300 [Oryza sativa Japonica Group]
gi|222630935|gb|EEE63067.1| hypothetical protein OsJ_17875 [Oryza sativa Japonica Group]
Length = 382
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 111/273 (40%), Positives = 153/273 (56%), Gaps = 37/273 (13%)
Query: 70 SLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFEN 129
SL +AK I Y PG +E V G DY +P T+ LL+GP+ +GKS+LVNRI++VF+
Sbjct: 65 SLREAKELIRRYKPGDLVEGVCGTKSGDYVLPDITTFLLVGPRDAGKSALVNRITRVFDK 124
Query: 130 DKFASE--RAQVTYNSSVGDGTYFLQEYTIPR---------------------------- 159
D RAQV+ NS GT FL+EY +PR
Sbjct: 125 DDDPDAPDRAQVSCNSK-STGTSFLREYRVPRNSNSICIYDTRSLSNNHENNFKMLQRWM 183
Query: 160 --GVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEGDS 217
G+ HG+++ +D+ S ++ + RKVNFVIFVV+G +VL+S+E ++
Sbjct: 184 TKGLSHGDIITWDNDNYSKIQNIKSMGRQYSFLRCKTRKVNFVIFVVNGASVLESIENNN 243
Query: 218 DVEKQYNQIVATTFNCPYLSFRDDKPVVVVTHGDLLSLTDRARIRTYLGELLGIPPAKQI 277
K Y ++ TF P+LSF DDKP VVVTHGD L+ R +R L ELLGI P +QI
Sbjct: 244 ---KNYIDMLHKTFMYPFLSFGDDKPAVVVTHGDRLTAQQRMHVRNELVELLGI-PLQQI 299
Query: 278 FDIPESSDPENELIIVDMLRYCLEHADRNLSCK 310
FDI D E +L ++DMLRYC++HA++N K
Sbjct: 300 FDISGCDDYETDLSVLDMLRYCIQHAEQNFPIK 332
>gi|218196465|gb|EEC78892.1| hypothetical protein OsI_19263 [Oryza sativa Indica Group]
Length = 367
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 111/273 (40%), Positives = 153/273 (56%), Gaps = 37/273 (13%)
Query: 70 SLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFEN 129
SL +AK I Y PG +E V G DY +P T+ LL+GP+ +GKS+LVNRI++VF+
Sbjct: 50 SLREAKELIRRYKPGDLVEGVCGTKSGDYVLPDITTFLLVGPRDAGKSALVNRITRVFDK 109
Query: 130 DKFASE--RAQVTYNSSVGDGTYFLQEYTIPR---------------------------- 159
D RAQV+ NS GT FL+EY +PR
Sbjct: 110 DDDPDAPDRAQVSCNSK-STGTSFLREYRVPRNSNSICIYDTRSLSNNHENNFKMLQRWM 168
Query: 160 --GVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEGDS 217
G+ HG+++ +D+ S ++ + RKVNFVIFVV+G +VL+S+E ++
Sbjct: 169 TKGLSHGDIITWDNDNYSKIQNIKSMGRQYSFLRCKTRKVNFVIFVVNGASVLESIENNN 228
Query: 218 DVEKQYNQIVATTFNCPYLSFRDDKPVVVVTHGDLLSLTDRARIRTYLGELLGIPPAKQI 277
K Y ++ TF P+LSF DDKP VVVTHGD L+ R +R L ELLGI P +QI
Sbjct: 229 ---KNYIDMLHKTFMYPFLSFGDDKPAVVVTHGDRLTAQQRMHVRNELVELLGI-PLQQI 284
Query: 278 FDIPESSDPENELIIVDMLRYCLEHADRNLSCK 310
FDI D E +L ++DMLRYC++HA++N K
Sbjct: 285 FDISGCDDYETDLSVLDMLRYCIQHAEQNFPIK 317
>gi|388520931|gb|AFK48527.1| unknown [Lotus japonicus]
Length = 210
Score = 177 bits (448), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 94/185 (50%), Positives = 119/185 (64%), Gaps = 30/185 (16%)
Query: 45 VDQRRRDAVFREVLQSYDQLRTRIGSLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTT 104
V++R+R V++E+LQ+YDQL+ +L +AK KILSY PGAWIE VGG+ L DYDVPKTT
Sbjct: 26 VNERKRLRVYQEILQTYDQLKIDSKNLKEAKEKILSYRPGAWIEKVGGLKLCDYDVPKTT 85
Query: 105 SLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQEYTIPR----- 159
L+L+GP GSGKSSL+NRISKVFE+D FA RAQV+YNS GDGT FL+EY IPR
Sbjct: 86 CLILVGPSGSGKSSLINRISKVFEDDNFAPARAQVSYNSLNGDGTCFLREYMIPREKTSI 145
Query: 160 -------------------------GVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVI 194
GV +GELV+R +D+ LR ++ K +K G S
Sbjct: 146 CLYDTRSLSDDLNENNRMLKNWMTKGVCNGELVVRNADNQKLRKSLKHKDNKKGLFSSKS 205
Query: 195 RKVNF 199
R+VN
Sbjct: 206 REVNL 210
>gi|168027995|ref|XP_001766514.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682159|gb|EDQ68579.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 524
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/333 (34%), Positives = 169/333 (50%), Gaps = 57/333 (17%)
Query: 30 LSGDDEGSRDSWDSLVDQRRRDAVFRE-----------VLQSYDQLRTRIGSLTDAKNKI 78
L DD+ + + + + DQ +A E ++ L+ R + + + K+
Sbjct: 133 LKSDDDAAVEDQNVVDDQAESNASLVEMDPVQAALSARIMYQEASLKKRARRIEEMRLKL 192
Query: 79 LSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQ 138
Y PG W+ GGM SD+ +P+ T+LL++G G+GKS+L+N + +V N +RAQ
Sbjct: 193 QRYEPGQWLVESGGMRKSDFAIPEVTTLLVVGSMGAGKSTLINNLIRVLNNKSQDFDRAQ 252
Query: 139 VTYNSSVGDGTYFLQEYTIP-------------------------------RGVRHGELV 167
V + +GTYFL EY + +GVRHG++V
Sbjct: 253 VCGDPG-ENGTYFLNEYMLNESKNNICVFDSRGMPELKVADGLEVLEDWMVKGVRHGQMV 311
Query: 168 IRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLK-SMEGDSDVEKQYNQI 226
IR SDSS ++ + KA + + S R +NFVIFV++ V K GD+ + +I
Sbjct: 312 IRTSDSSRVKEAVERKARQGHHKLSKKRHINFVIFVINATTVHKIRHSGDTLSRPNFLRI 371
Query: 227 VATTFNCPYLSFRDDKPVVVVTHGDLLSLTDRARIRTYLGELLGIPPAKQIFDIP----- 281
F P ++F+DD+PVVV+THGD LS DR R YLG LLG+ P +FDI
Sbjct: 372 ----FKFPLITFKDDRPVVVMTHGDELSEDDRLAARIYLGNLLGVSPVDHVFDIAGFTGR 427
Query: 282 --ESSD--PENELIIVDMLRYCLEHADRNLSCK 310
E D EN+L+++DML Y L+ ADRNL K
Sbjct: 428 VMEDGDQCAENDLLLLDMLEYALQRADRNLPYK 460
>gi|46200523|gb|AAS82599.1| hypothetical protein S250_18C08.34 [Sorghum bicolor]
Length = 301
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 114/297 (38%), Positives = 163/297 (54%), Gaps = 44/297 (14%)
Query: 19 ISPVDDFDIPLLSGDDEGSRDSWDSLVDQRRRDAV--FREVLQSYDQLRTRIGSLTDAKN 76
+SP+ D D DD D D++ ++ R+A F L+ + L + K
Sbjct: 7 VSPISDDDESCCVCDD----DEVDAIRCRQLREAKEHFNRQLREAKEFHFN-RQLREVKE 61
Query: 77 KILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFE--NDKFAS 134
I Y PG W+E VGG + +P+ T+LLL+GP+GSGKS+LVNRI++VF+ +D FA
Sbjct: 62 LIRRYKPGDWVEGVGGAKAGHFLLPEITTLLLVGPRGSGKSTLVNRITRVFDKDDDPFAP 121
Query: 135 ERAQVTYNSSVGDGTYFLQEYTIPR------------------------------GVRHG 164
+RAQV+ NS+ + T FL EY IPR G+ HG
Sbjct: 122 DRAQVSCNST-SNRTIFLHEYPIPRNSSAICIYDTCGWSNDPKKNFKMLHQWMTKGISHG 180
Query: 165 ELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEGDSDVEKQYN 224
E ++ +D + ++ + + RKVNFVIFVVDG+AVL+S++ ++ K Y
Sbjct: 181 ETIMWDNDEGNKTGGIKPLGRQYSFLRYITRKVNFVIFVVDGVAVLESIDSNN---KGYT 237
Query: 225 QIVATTFNCPYLSFRDDKPVVVVTHGDLLSLTDRARIRTYLGELLGIPPAKQIFDIP 281
+I+ TF P+LS DDKPVVVVTHGD LS+ A ++ L ELL I PA+QI+ IP
Sbjct: 238 EILHQTFMYPFLSIGDDKPVVVVTHGDRLSIQQCAHVQNELTELLNI-PAQQIYAIP 293
>gi|5123944|emb|CAB45502.1| putative protein [Arabidopsis thaliana]
gi|7268005|emb|CAB78345.1| putative protein [Arabidopsis thaliana]
Length = 360
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/233 (41%), Positives = 130/233 (55%), Gaps = 52/233 (22%)
Query: 107 LLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQEYTIPRG------ 160
+L+GPKG+GKSSLVN+I++V E+D F +RAQ ++ + GTYF+QEY I RG
Sbjct: 1 MLVGPKGAGKSSLVNKITRVIEDDAFLLDRAQESFGTPSKGGTYFVQEYMISRGGSASFC 60
Query: 161 --------------------------VRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVI 194
V HGE VI SDSS L++R+ + G E
Sbjct: 61 LYDTRGLSRISSSDNTSMIEQWMTRGVLHGEPVIWASDSSDLKDRL-IRDGGTGYER--- 116
Query: 195 RKVNFVIFVVDGLAVLKSMEGDSDVEKQYNQIVATTFNCPYLSFRDDKPVVVVTHGDLLS 254
RKVN +IFVV+ + +LKSME E Y ++ T FN P L F+DDKP VV+THGD+LS
Sbjct: 117 RKVNSIIFVVNAVEILKSME----CETSYASMITTAFNSPILLFKDDKPAVVMTHGDMLS 172
Query: 255 LTDRARIRTYLGELLGIPPAKQIFDIPESSDPENELIIVDMLRYCLEHADRNL 307
+RAR+R +LGELL ES D + I ++L Y L+HAD+N
Sbjct: 173 REERARVRVFLGELL------------ESRDTATAITICNLLCYSLQHADKNF 213
>gi|413916052|gb|AFW55984.1| hypothetical protein ZEAMMB73_901421 [Zea mays]
Length = 584
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/81 (56%), Positives = 61/81 (75%), Gaps = 3/81 (3%)
Query: 81 YTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVF--ENDKFASERAQ 138
Y PG WIE VGG + +P+ T+LLL+GP+GSGKS+LVNRI++VF ++D FA +RAQ
Sbjct: 172 YKPGDWIEGVGGAKAGHFVLPEVTTLLLVGPRGSGKSTLVNRITRVFDKDDDPFAPDRAQ 231
Query: 139 VTYNSSVGDGTYFLQEYTIPR 159
V+ NS +GT FL+EY IPR
Sbjct: 232 VSCNSK-SNGTMFLREYPIPR 251
>gi|414886271|tpg|DAA62285.1| TPA: hypothetical protein ZEAMMB73_289405 [Zea mays]
Length = 236
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/81 (56%), Positives = 61/81 (75%), Gaps = 3/81 (3%)
Query: 81 YTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVF--ENDKFASERAQ 138
Y PG WIE VGG + +P+ T+LLL+GP+GSGKS+LVNRI++VF ++D FA +RAQ
Sbjct: 139 YKPGDWIEGVGGAKAGHFVLPEVTTLLLVGPRGSGKSTLVNRITRVFDKDDDPFAPDRAQ 198
Query: 139 VTYNSSVGDGTYFLQEYTIPR 159
V+ NS +GT FL+EY IPR
Sbjct: 199 VSCNSK-SNGTMFLREYPIPR 218
>gi|359480106|ref|XP_003632400.1| PREDICTED: uncharacterized protein LOC100854991 [Vitis vinifera]
Length = 379
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 109/245 (44%), Gaps = 44/245 (17%)
Query: 71 LTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFEND 130
L++ + K++SY G + GGM D D+P ++LL+G GSGKSSLVN + V
Sbjct: 66 LSELRQKLVSYRSGDFWVPTGGMKREDMDIPPVITILLVGFSGSGKSSLVNLMYSVLGRS 125
Query: 131 KFASERAQVTYNSSVGDGTYFLQEYTIPR------------------------------- 159
A + +S T F++E+ + R
Sbjct: 126 GLIP-FATTSSENSAKCTTKFMEEHNVLRSMQSGFCVYDSRGLDYDLMGESIEEVSEWMT 184
Query: 160 -GVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSME-GDS 217
GV H +L +R D+ L + RKVN + VV+ + KS++ GD
Sbjct: 185 NGVHHNQLCLRTGDN--LMSEEELSEVPGSSSKFTPRKVNCAMVVVNIAEIFKSLKKGD- 241
Query: 218 DVEKQYNQIVAT--TFNCPYLSFRDDKPVVVVTHGDLLSLTDRARIRTYLGELLGIPPAK 275
+ + AT F CP L ++ P++++THGDLLS +R +IR L E LGI
Sbjct: 242 -----WKPLEATRELFRCPALKKCNENPILIMTHGDLLSTEERIKIRLTLCEFLGISETT 296
Query: 276 QIFDI 280
++DI
Sbjct: 297 GVYDI 301
>gi|224068434|ref|XP_002302744.1| predicted protein [Populus trichocarpa]
gi|222844470|gb|EEE82017.1| predicted protein [Populus trichocarpa]
Length = 381
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 116/279 (41%), Gaps = 52/279 (18%)
Query: 71 LTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFEND 130
L + + K+ Y G + GG+ + D+P ++LL+G GSGKSSLVN + V
Sbjct: 66 LNEVRYKLQMYRSGDFWVPTGGIKKEEMDIPPVITILLVGFSGSGKSSLVNLMYSVLGRS 125
Query: 131 KFASERAQVTYNSSVGDGTYFLQEYTIPR------------------------------- 159
AQ + + T +++E+ + R
Sbjct: 126 GLIP-FAQTSSGCASKYTTMYMEEHNVMRSLQGGFCVYDSRGFSYGKIGDALEELSSWMS 184
Query: 160 -GVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPS---VIRKVNFVIFVVDGLAVLKSMEG 215
GV H +L +R D L + A G PS V R VNF + VV+ V K+++
Sbjct: 185 DGVHHNQLCLRSGDDVLLED----DAETAGLRPSSKFVQRTVNFSMVVVNIAEVYKALKA 240
Query: 216 DSDVEKQYNQIVATTFNCPYLSFRDDKPVVVVTHGDLLSLTDRARIRTYLGELLGIPPAK 275
+ + + F+ P L ++ P++++THGDLL+ R IR L E LGI
Sbjct: 241 S---DSKPLEATRELFHSPGLRNCNENPMLILTHGDLLTTEQRIDIRIKLCERLGISETN 297
Query: 276 QIFDI---------PESSDPENELIIVDMLRYCLEHADR 305
++DI E SDP + + + L ADR
Sbjct: 298 GVYDIVCLTEYGFLAEESDPVTAYAVTEAVYRALLIADR 336
>gi|255548537|ref|XP_002515325.1| ATP binding protein, putative [Ricinus communis]
gi|223545805|gb|EEF47309.1| ATP binding protein, putative [Ricinus communis]
Length = 382
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 121/279 (43%), Gaps = 52/279 (18%)
Query: 71 LTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFEND 130
L + + K+ Y G + GG+ + D+P ++LL+G SGKSSLVN + V
Sbjct: 66 LNELRYKLQMYKSGDYWVPTGGIEKEEMDIPSVITILLVGFSSSGKSSLVNLMYSVLGRT 125
Query: 131 KFASERAQVTYNSSVGDGTYFLQEYTIPR------------------------------- 159
AQ + + T +++E+ + R
Sbjct: 126 GLVP-FAQTSSGGAKNYTTMYMEEHNVMRSMQSGFCVFDSRGFNYDKIGEALEELSSWMT 184
Query: 160 -GVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSME-GDS 217
GV H +L +R D++ L++ + A + +IR+VN + VV+ V K+++ GDS
Sbjct: 185 DGVHHNQLCLRSGDATLLKDDIEAAASR-SSSKFLIRRVNCAMVVVNIAEVYKALKAGDS 243
Query: 218 DVEKQYNQIVAT--TFNCPYLSFRDDKPVVVVTHGDLLSLTDRARIRTYLGELLGIPPAK 275
Q+ AT F P L ++ P++++THGDLL+ +R R + E LGI
Sbjct: 244 ------KQLEATRELFCSPALRKCNENPILILTHGDLLTNEERIEGRIKICERLGIQETN 297
Query: 276 QIFDI---------PESSDPENELIIVDMLRYCLEHADR 305
++D+ E SDP + + + L +DR
Sbjct: 298 GVYDVVCLTEYGFLAEESDPVTAYAVAEAVYRALLISDR 336
>gi|224128396|ref|XP_002320319.1| predicted protein [Populus trichocarpa]
gi|222861092|gb|EEE98634.1| predicted protein [Populus trichocarpa]
Length = 381
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 117/285 (41%), Gaps = 54/285 (18%)
Query: 71 LTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFEND 130
L + + K+ Y G + GG+ + D+P ++LL+G GSGKSSLVN + VF
Sbjct: 66 LNELRYKLQMYRSGDFWVPTGGLKKEEMDIPPVITILLVGFSGSGKSSLVNLMYSVFGRS 125
Query: 131 KFASERAQVTYNSSVGDGTYFLQEYTIPR------------------------------- 159
A+ + + T +++E+ + R
Sbjct: 126 GLIP-FARTSSGGATKYTTMYMEEHNVMRSMQGGFCVYDSRGFNYGKIGDALEELSSWMS 184
Query: 160 -GVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPS---VIRKVNFVIFVVDGLAVLK-SME 214
G+ H +L +R D L +G S V R VN + VV+ V K S
Sbjct: 185 DGIHHNQLCLRSGDDVLLE----ADTETVGLRSSSKFVQRTVNIPMVVVNIAEVHKASKA 240
Query: 215 GDSDVEKQYNQIVATTFNCPYLSFRDDKPVVVVTHGDLLSLTDRARIRTYLGELLGIPPA 274
DS + ++ F+ P L ++ P++++THGDLL+ +R +R L E LGI
Sbjct: 241 SDSKPLEATREL----FHSPALRKCNENPILILTHGDLLTTEERMDMRLRLCERLGISET 296
Query: 275 KQIFDI---------PESSDPENELIIVDMLRYCLEHADRNLSCK 310
++DI E SDP + + + L +DR S K
Sbjct: 297 NGVYDIVCLTEYGFLAEESDPVTAYALAEAVYRALLISDRGHSPK 341
>gi|297743947|emb|CBI36917.3| unnamed protein product [Vitis vinifera]
Length = 287
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 94/217 (43%), Gaps = 44/217 (20%)
Query: 99 DVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQEYTIP 158
D+P ++LL+G GSGKSSLVN + V A + +S T F++E+ +
Sbjct: 2 DIPPVITILLVGFSGSGKSSLVNLMYSVLGRSGLIP-FATTSSENSAKCTTKFMEEHNVL 60
Query: 159 R--------------------------------GVRHGELVIRRSDSSSLRNRMRCKAHK 186
R GV H +L +R D+ L +
Sbjct: 61 RSMQSGFCVYDSRGLDYDLMGESIEEVSEWMTNGVHHNQLCLRTGDN--LMSEEELSEVP 118
Query: 187 IGCEPSVIRKVNFVIFVVDGLAVLKSME-GDSDVEKQYNQIVAT--TFNCPYLSFRDDKP 243
RKVN + VV+ + KS++ GD + + AT F CP L ++ P
Sbjct: 119 GSSSKFTPRKVNCAMVVVNIAEIFKSLKKGD------WKPLEATRELFRCPALKKCNENP 172
Query: 244 VVVVTHGDLLSLTDRARIRTYLGELLGIPPAKQIFDI 280
++++THGDLLS +R +IR L E LGI ++DI
Sbjct: 173 ILIMTHGDLLSTEERIKIRLTLCEFLGISETTGVYDI 209
>gi|414588952|tpg|DAA39523.1| TPA: hypothetical protein ZEAMMB73_000332 [Zea mays]
Length = 486
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 29/79 (36%)
Query: 81 YTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVT 140
Y PG WIE +GG + +P+ T+LLL+GP+G+ KS
Sbjct: 35 YKPGDWIEGIGGAKAGHFVLPEVTTLLLVGPRGNSKS----------------------- 71
Query: 141 YNSSVGDGTYFLQEYTIPR 159
+GT FL+EY IPR
Sbjct: 72 ------NGTMFLREYPIPR 84
>gi|125802987|ref|XP_001346001.1| PREDICTED: interferon-induced protein 44 [Danio rerio]
Length = 293
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 46/78 (58%), Gaps = 11/78 (14%)
Query: 86 WIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSV 145
W+EN TLSD +V K +L++GP G+GKSS +N I+ VF+ + S +A V NS+
Sbjct: 37 WLEN---FTLSDPNV-KDIKILVVGPSGAGKSSFINSINSVFQ--RRISSKALV--NSAG 88
Query: 146 GDGTYF---LQEYTIPRG 160
GD F L+ TI G
Sbjct: 89 GDNHSFTEKLKRLTIKNG 106
>gi|443469976|ref|ZP_21060114.1| Serine protein kinase (prkA protein), P-loop containing
[Pseudomonas pseudoalcaligenes KF707]
gi|442899495|gb|ELS25943.1| Serine protein kinase (prkA protein), P-loop containing
[Pseudomonas pseudoalcaligenes KF707]
Length = 640
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ +V E F + + + S +G DG +EY
Sbjct: 102 KKQVLYLLGPVGGGKSSLAEKLKQVMERVPFYAIKGSPVFESPLGLFNPDEDGAILEEEY 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IPR R+ VI + L ++ G + S R V +++ +A+ K+ G
Sbjct: 162 GIPR--RYLRTVISPWATKRL--------NEFGGDISKFRVVKLYPSILNQIAIAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|89094578|ref|ZP_01167516.1| hypothetical protein MED92_01064 [Neptuniibacter caesariensis]
gi|89081177|gb|EAR60411.1| hypothetical protein MED92_01064 [Oceanospirillum sp. MED92]
Length = 640
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 77/189 (40%), Gaps = 27/189 (14%)
Query: 36 GSRDSWDSLVDQRRRDAVFREVLQSYDQLRTRIGSLTDAKNKILSYTPGAWIENVGGMTL 95
G + D+ D R+ ++++ Y G + DA I+SY A G+
Sbjct: 47 GEPEMIDTSTDPRQSRIFSNKLIKRYPAFSEFYG-MEDAIENIVSYFKHA----AQGLE- 100
Query: 96 SDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGT 149
+ L L+GP G GKSSL R+ + E+ F + + + S +G DG
Sbjct: 101 -----ERKQILYLLGPVGGGKSSLAERLKHLMEHIPFFAIKGSPVFESPLGLFKPEEDGD 155
Query: 150 YFLQEYTIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAV 209
+EY IP G + S R+ H+ G + S R V ++D +A+
Sbjct: 156 ILREEYGIPSRYLKGIM------SPWAVKRL----HEFGGDISKFRVVKLYPSILDQIAI 205
Query: 210 LKSMEGDSD 218
K+ GD +
Sbjct: 206 AKTEPGDEN 214
>gi|433651027|ref|YP_007296029.1| amino acid ABC transporter ATP-binding protein, PAAT family
[Mycobacterium smegmatis JS623]
gi|433300804|gb|AGB26624.1| amino acid ABC transporter ATP-binding protein, PAAT family
[Mycobacterium smegmatis JS623]
Length = 245
Score = 43.9 bits (102), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 7/64 (10%)
Query: 69 GSLTDAKNKI-LSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVF 127
G ++ N I L++ P A + V D DVP T+ +IGP GSGKS+L+ +++++
Sbjct: 3 GPVSLGANDIHLTFGPNAVLRGV------DLDVPAGTTTAVIGPSGSGKSTLLRTLNRLY 56
Query: 128 ENDK 131
E DK
Sbjct: 57 EPDK 60
>gi|375138966|ref|YP_004999615.1| polar amino acid ABC transporter ATPase [Mycobacterium rhodesiae
NBB3]
gi|359819587|gb|AEV72400.1| ABC-type polar amino acid transport system, ATPase component
[Mycobacterium rhodesiae NBB3]
Length = 246
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 6/58 (10%)
Query: 74 AKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDK 131
AK+ LS+ P A + V D +VP T+ +IGP GSGKS+L+ +++++E D+
Sbjct: 12 AKDIHLSFGPNAVLRGV------DIEVPAGTTAAVIGPSGSGKSTLLRTLNRLYEPDR 63
>gi|372270266|ref|ZP_09506314.1| PrkA family serine protein kinase [Marinobacterium stanieri S30]
Length = 640
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 53/127 (41%), Gaps = 24/127 (18%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL R+ + E+ F + + + S +G D QEY
Sbjct: 102 KKQILYLLGPVGGGKSSLAERLKHLMEHIPFYAIKGSPVFESPLGLFNPEEDAEILEQEY 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKA----HKIGCEPSVIRKVNFVIFVVDGLAVLK 211
IPR +LR M A H+ G + + R V ++D + + K
Sbjct: 162 GIPR--------------RNLRGIMSPWAVKRLHEYGGDITQFRVVKLYPSILDQVGIAK 207
Query: 212 SMEGDSD 218
+ GD +
Sbjct: 208 TEPGDEN 214
>gi|312129394|ref|YP_003996734.1| ABC transporter related protein [Leadbetterella byssophila DSM
17132]
gi|311905940|gb|ADQ16381.1| ABC transporter related protein [Leadbetterella byssophila DSM
17132]
Length = 582
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 67/150 (44%), Gaps = 20/150 (13%)
Query: 56 EVLQSYDQLRTRIGSLTDAKNKI------LSYTPGAWI-ENVGGMTLSDYDVPKTTSLLL 108
E+L DQ+ GS + K + +Y WI +N+ ++D+P SL
Sbjct: 316 EILDDEDQMEQESGSTHEIKGHLKFDNVSFAYKGEDWILKNI------NFDLPAGKSLAF 369
Query: 109 IGPKGSGKSSLVNRISKVFENDKF-----ASERAQVTYNSSVGDGTYFLQEYTIPRGVRH 163
+GP G+GK+S +N +++ ++ K E ++T NS LQ+ + RG
Sbjct: 370 VGPTGAGKTSTINLLTRFYDFQKGNIYIDGKEIREITLNSLRKQVGVVLQDVFLFRGSIL 429
Query: 164 GELVIRRSDSSSLRNRMRCKAHKIGCEPSV 193
L R D S ++++ A ++G +
Sbjct: 430 DNL--RLGDESISKDKVIAAAQEVGIHEFI 457
>gi|269955456|ref|YP_003325245.1| adenylate kinase [Xylanimonas cellulosilytica DSM 15894]
gi|269304137|gb|ACZ29687.1| adenylate kinase [Xylanimonas cellulosilytica DSM 15894]
Length = 211
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 11/82 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASE---RAQVTYNSSVGDGTYFLQEYTIP 158
+ T LL++GP+GSGK + R+++VFE ++ RA + N+ +G QEYT
Sbjct: 20 RATRLLIMGPQGSGKGTQAARLAEVFEIPAISTGDIFRANIKGNTELG---RLAQEYT-- 74
Query: 159 RGVRHGELVIRRSDSSSLRNRM 180
GELV S +R+R+
Sbjct: 75 ---NKGELVPDEVTDSMVRDRL 93
>gi|392419058|ref|YP_006455663.1| amino acid ABC transporter ATP-binding protein, PAAT family
[Mycobacterium chubuense NBB4]
gi|390618834|gb|AFM19984.1| amino acid ABC transporter ATP-binding protein, PAAT family
[Mycobacterium chubuense NBB4]
Length = 247
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 74 AKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDK 131
A++ LS+ P A + V D DV TS +IGP GSGKS+L+ +++++E D+
Sbjct: 13 ARDLHLSFGPNAVLRGV------DLDVAAGTSTAVIGPSGSGKSTLLRTLNRLYEPDR 64
>gi|399522524|ref|ZP_10763187.1| putative serine protein kinase, PrkA [Pseudomonas pseudoalcaligenes
CECT 5344]
gi|399109388|emb|CCH39748.1| putative serine protein kinase, PrkA [Pseudomonas pseudoalcaligenes
CECT 5344]
Length = 640
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 54/123 (43%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E F + + + S +G DG ++Y
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLMEKVPFYAIKGSPVFESPLGLFNATEDGAILEEDY 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IP RR SS + + + G + S R V +++ +AV K+ G
Sbjct: 162 GIP----------RRYLSSIMSPWATKRLQEFGGDISQFRVVKLYPSILNQIAVAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|330505269|ref|YP_004382138.1| putative serine protein kinase PrkA [Pseudomonas mendocina NK-01]
gi|328919555|gb|AEB60386.1| putative serine protein kinase, PrkA [Pseudomonas mendocina NK-01]
Length = 640
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 54/123 (43%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E F + + + S +G DG ++Y
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLMEKVPFYAIKGSPVFESPLGLFNATEDGAILEEDY 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IP RR SS + + + G + S R V +++ +AV K+ G
Sbjct: 162 GIP----------RRYLSSIMSPWATKRLQEFGGDISQFRVVKLYPSILNQIAVAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|404423270|ref|ZP_11004924.1| ABC transporter ATP-binding protein [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
gi|403654510|gb|EJZ09422.1| ABC transporter ATP-binding protein [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
Length = 245
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 6/57 (10%)
Query: 74 AKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFEND 130
AK+ LS+ P + V D DVP T+ +IGP GSGKS+L+ +++++E D
Sbjct: 11 AKDIHLSFGPNKVLRGV------DLDVPAGTTTAIIGPSGSGKSTLLRTLNRLYEPD 61
>gi|407981360|ref|ZP_11162062.1| ABC transporter family protein [Mycobacterium hassiacum DSM 44199]
gi|407377024|gb|EKF25938.1| ABC transporter family protein [Mycobacterium hassiacum DSM 44199]
Length = 243
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 74 AKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDK 131
A++ LS+ P + V D DVP T+ +IGP GSGKS+L+ +++++E D+
Sbjct: 9 ARDIHLSFGPSQVLRGV------DIDVPAGTTAAVIGPSGSGKSTLLRTLNRLYEPDR 60
>gi|383824201|ref|ZP_09979385.1| ABC transporter ATP-binding protein [Mycobacterium xenopi
RIVM700367]
gi|383337474|gb|EID15850.1| ABC transporter ATP-binding protein [Mycobacterium xenopi
RIVM700367]
Length = 249
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 74 AKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDK 131
K+ LS+ P A + V D DVP ++ +IGP GSGKS+L+ +++++E D+
Sbjct: 15 GKDIHLSFGPNAVLRGV------DIDVPAGSTAAVIGPSGSGKSTLLRTLNRLYEPDR 66
>gi|118471659|ref|YP_891109.1| ABC transporter ATP-binding protein [Mycobacterium smegmatis str.
MC2 155]
gi|118172946|gb|ABK73842.1| ABC transporter, ATP-binding protein GluA [Mycobacterium smegmatis
str. MC2 155]
Length = 245
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 7/62 (11%)
Query: 70 SLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFEN 129
SLT A N L++ P + V D DVP T+ +IGP GSGKS+L+ +++++E
Sbjct: 8 SLT-ATNIHLAFGPNKVLRGV------DLDVPAGTTTAVIGPSGSGKSTLLRTLNRLYEP 60
Query: 130 DK 131
D+
Sbjct: 61 DE 62
>gi|441218622|ref|ZP_20977829.1| phosphate ABC superfamily ATP binding cassette transporter, ABC
protein [Mycobacterium smegmatis MKD8]
gi|440623867|gb|ELQ85741.1| phosphate ABC superfamily ATP binding cassette transporter, ABC
protein [Mycobacterium smegmatis MKD8]
Length = 245
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 7/62 (11%)
Query: 70 SLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFEN 129
SLT A N L++ P + V D DVP T+ +IGP GSGKS+L+ +++++E
Sbjct: 8 SLT-ATNIHLAFGPNKVLRGV------DLDVPAGTTTAVIGPSGSGKSTLLRTLNRLYEP 60
Query: 130 DK 131
D+
Sbjct: 61 DE 62
>gi|399991095|ref|YP_006571446.1| glutamine ABC transporter, ATP-binding protein [Mycobacterium
smegmatis str. MC2 155]
gi|399235658|gb|AFP43151.1| Glutamine ABC transporter, ATP-binding protein [Mycobacterium
smegmatis str. MC2 155]
Length = 237
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 74 AKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDK 131
A N L++ P + V D DVP T+ +IGP GSGKS+L+ +++++E D+
Sbjct: 3 ATNIHLAFGPNKVLRGV------DLDVPAGTTTAVIGPSGSGKSTLLRTLNRLYEPDE 54
>gi|408500443|ref|YP_006864362.1| ABC transporter, permease/ATP binding protein [Bifidobacterium
asteroides PRL2011]
gi|408465267|gb|AFU70796.1| ABC transporter, permease/ATP binding protein [Bifidobacterium
asteroides PRL2011]
Length = 635
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
Query: 73 DAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFE 128
D + + Y PG N+ + L D+ VP +++ L+GP G+GK+++VN +S+ ++
Sbjct: 364 DFNDVVFKYEPGG--RNI--LNLVDFHVPAGSTVALVGPTGAGKTTIVNLLSRFYD 415
>gi|146309031|ref|YP_001189496.1| putative serine protein kinase PrkA [Pseudomonas mendocina ymp]
gi|421505667|ref|ZP_15952602.1| PrkA family serine protein kinase [Pseudomonas mendocina DLHK]
gi|145577232|gb|ABP86764.1| putative serine protein kinase, PrkA [Pseudomonas mendocina ymp]
gi|400343364|gb|EJO91739.1| PrkA family serine protein kinase [Pseudomonas mendocina DLHK]
Length = 640
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 54/123 (43%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E F + + + S +G DG ++Y
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLMEKVPFYAIKGSPVFESPLGLFNAAEDGAILEEDY 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IP RR +S + + + G + S R V +++ +AV K+ G
Sbjct: 162 GIP----------RRYLNSIMSPWATKRLQEFGGDISQFRVVKLYPSILNQIAVAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|228963954|ref|ZP_04125088.1| ABC transporter [Bacillus thuringiensis serovar sotto str. T04001]
gi|228795732|gb|EEM43206.1| ABC transporter [Bacillus thuringiensis serovar sotto str. T04001]
Length = 336
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 14/92 (15%)
Query: 36 GSRDSWDSLVDQRRRDAVFREVLQSYDQLRTRIGSLTDAKNKILSYTPGAWIENVGGMTL 95
GS S ++++D R++ ++ Q + L+ SL + NKIL +NV
Sbjct: 63 GSFQSLNTILDSSTRESTGQQCYQFNETLKFNSVSLGISGNKIL--------DNVS---- 110
Query: 96 SDYDVPKTTSLLLIGPKGSGKSSLVNRISKVF 127
+D+ K +L +IGP GSGK++++N + K +
Sbjct: 111 --FDMKKGETLTIIGPSGSGKTTIINLLEKFY 140
>gi|402562124|ref|YP_006604848.1| ABC transporter [Bacillus thuringiensis HD-771]
gi|401790776|gb|AFQ16815.1| ABC transporter [Bacillus thuringiensis HD-771]
Length = 576
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 14/92 (15%)
Query: 36 GSRDSWDSLVDQRRRDAVFREVLQSYDQLRTRIGSLTDAKNKILSYTPGAWIENVGGMTL 95
GS S ++++D R++ ++ Q + L+ SL + NKIL +NV
Sbjct: 303 GSFQSLNTILDSSTRESTGQQCYQFNETLKFNSVSLGISGNKIL--------DNVS---- 350
Query: 96 SDYDVPKTTSLLLIGPKGSGKSSLVNRISKVF 127
+D+ K +L +IGP GSGK++++N + K +
Sbjct: 351 --FDMKKGETLTIIGPSGSGKTTIINLLEKFY 380
>gi|453050007|gb|EME97566.1| ABC transporter [Streptomyces mobaraensis NBRC 13819 = DSM 40847]
Length = 262
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 69 GSLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFE 128
GS T A N+I+ TPGA + V + + + ++ LIG GSGKS+L+ I+ +
Sbjct: 35 GSATAALNRIVKRTPGAGVREVHAVKGVSFTAYRGQAIGLIGSNGSGKSTLLKAIAGLLP 94
Query: 129 NDK 131
++
Sbjct: 95 TER 97
>gi|418294114|ref|ZP_12906015.1| PrkA family serine protein kinase [Pseudomonas stutzeri ATCC 14405
= CCUG 16156]
gi|379065498|gb|EHY78241.1| PrkA family serine protein kinase [Pseudomonas stutzeri ATCC 14405
= CCUG 16156]
Length = 640
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 54/123 (43%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E+ F + + + S +G D ++Y
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLMEHVPFYAIKGSPVFESPLGLFNPVEDAQILEEDY 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IP RR SS + + + G + S R V +++ +AV K+ G
Sbjct: 162 GIP----------RRYLSSIMSPWATKRLQEFGGDISKFRVVKLYPSILNQIAVAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|399912048|ref|ZP_10780362.1| PrkA family serine protein kinase [Halomonas sp. KM-1]
Length = 640
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
Query: 106 LLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEYTIPR 159
L L+GP G GKSSL R+ + E+ F + + Y S +G DG +EY IPR
Sbjct: 106 LYLLGPVGGGKSSLAERLKLLMEHIPFYAIKGSPVYESPLGLFSPEEDGELLEKEYGIPR 165
>gi|15595785|ref|NP_249279.1| hypothetical protein PA0588 [Pseudomonas aeruginosa PAO1]
gi|107099574|ref|ZP_01363492.1| hypothetical protein PaerPA_01000587 [Pseudomonas aeruginosa PACS2]
gi|116054316|ref|YP_788761.1| hypothetical protein PA14_07680 [Pseudomonas aeruginosa UCBPP-PA14]
gi|218889329|ref|YP_002438193.1| putative protein kinase [Pseudomonas aeruginosa LESB58]
gi|254237198|ref|ZP_04930521.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|254243682|ref|ZP_04937004.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|296387094|ref|ZP_06876593.1| putative serine protein kinase, PrkA [Pseudomonas aeruginosa PAb1]
gi|313111767|ref|ZP_07797560.1| hypothetical protein PA39016_004010063 [Pseudomonas aeruginosa
39016]
gi|355647005|ref|ZP_09054758.1| hypothetical protein HMPREF1030_03844 [Pseudomonas sp. 2_1_26]
gi|386056658|ref|YP_005973180.1| protein kinase [Pseudomonas aeruginosa M18]
gi|386068492|ref|YP_005983796.1| hypothetical protein NCGM2_5599 [Pseudomonas aeruginosa NCGM2.S1]
gi|392982001|ref|YP_006480588.1| PrkA family serine protein kinase [Pseudomonas aeruginosa DK2]
gi|416855760|ref|ZP_11911681.1| PrkA family serine protein kinase [Pseudomonas aeruginosa 138244]
gi|416873056|ref|ZP_11917183.1| PrkA family serine protein kinase [Pseudomonas aeruginosa 152504]
gi|418584840|ref|ZP_13148897.1| PrkA family serine protein kinase [Pseudomonas aeruginosa MPAO1/P1]
gi|418590793|ref|ZP_13154698.1| PrkA family serine protein kinase [Pseudomonas aeruginosa MPAO1/P2]
gi|419756070|ref|ZP_14282422.1| PrkA family serine protein kinase [Pseudomonas aeruginosa
PADK2_CF510]
gi|420137183|ref|ZP_14645178.1| hypothetical protein PACIG1_0674 [Pseudomonas aeruginosa CIG1]
gi|421151674|ref|ZP_15611282.1| hypothetical protein PABE171_0624 [Pseudomonas aeruginosa ATCC
14886]
gi|421157628|ref|ZP_15616985.1| hypothetical protein PABE173_0609 [Pseudomonas aeruginosa ATCC
25324]
gi|421165466|ref|ZP_15623794.1| hypothetical protein PABE177_0612 [Pseudomonas aeruginosa ATCC
700888]
gi|421172353|ref|ZP_15630128.1| hypothetical protein PACI27_0606 [Pseudomonas aeruginosa CI27]
gi|421178500|ref|ZP_15636113.1| hypothetical protein PAE2_0559 [Pseudomonas aeruginosa E2]
gi|421515208|ref|ZP_15961894.1| PrkA family serine protein kinase [Pseudomonas aeruginosa PAO579]
gi|424942987|ref|ZP_18358750.1| putative protein kinase [Pseudomonas aeruginosa NCMG1179]
gi|451983554|ref|ZP_21931833.1| Serine protein kinase (prkA protein), P-loop containing
[Pseudomonas aeruginosa 18A]
gi|9946460|gb|AAG03977.1|AE004495_1 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
gi|115589537|gb|ABJ15552.1| putative protein kinase [Pseudomonas aeruginosa UCBPP-PA14]
gi|126169129|gb|EAZ54640.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|126197060|gb|EAZ61123.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|218769552|emb|CAW25312.1| putative protein kinase [Pseudomonas aeruginosa LESB58]
gi|310884062|gb|EFQ42656.1| hypothetical protein PA39016_004010063 [Pseudomonas aeruginosa
39016]
gi|334842658|gb|EGM21261.1| PrkA family serine protein kinase [Pseudomonas aeruginosa 138244]
gi|334845354|gb|EGM23917.1| PrkA family serine protein kinase [Pseudomonas aeruginosa 152504]
gi|346059433|dbj|GAA19316.1| putative protein kinase [Pseudomonas aeruginosa NCMG1179]
gi|347302964|gb|AEO73078.1| putative protein kinase [Pseudomonas aeruginosa M18]
gi|348037051|dbj|BAK92411.1| hypothetical protein NCGM2_5599 [Pseudomonas aeruginosa NCGM2.S1]
gi|354828147|gb|EHF12274.1| hypothetical protein HMPREF1030_03844 [Pseudomonas sp. 2_1_26]
gi|375045172|gb|EHS37758.1| PrkA family serine protein kinase [Pseudomonas aeruginosa MPAO1/P1]
gi|375050339|gb|EHS42821.1| PrkA family serine protein kinase [Pseudomonas aeruginosa MPAO1/P2]
gi|384397732|gb|EIE44143.1| PrkA family serine protein kinase [Pseudomonas aeruginosa
PADK2_CF510]
gi|392317506|gb|AFM62886.1| PrkA family serine protein kinase [Pseudomonas aeruginosa DK2]
gi|403250024|gb|EJY63485.1| hypothetical protein PACIG1_0674 [Pseudomonas aeruginosa CIG1]
gi|404348936|gb|EJZ75273.1| PrkA family serine protein kinase [Pseudomonas aeruginosa PAO579]
gi|404526874|gb|EKA37061.1| hypothetical protein PABE171_0624 [Pseudomonas aeruginosa ATCC
14886]
gi|404537949|gb|EKA47512.1| hypothetical protein PACI27_0606 [Pseudomonas aeruginosa CI27]
gi|404541679|gb|EKA51030.1| hypothetical protein PABE177_0612 [Pseudomonas aeruginosa ATCC
700888]
gi|404548349|gb|EKA57304.1| hypothetical protein PAE2_0559 [Pseudomonas aeruginosa E2]
gi|404550435|gb|EKA59184.1| hypothetical protein PABE173_0609 [Pseudomonas aeruginosa ATCC
25324]
gi|451758793|emb|CCQ84356.1| Serine protein kinase (prkA protein), P-loop containing
[Pseudomonas aeruginosa 18A]
gi|453045970|gb|EME93688.1| PrkA family serine protein kinase [Pseudomonas aeruginosa
PA21_ST175]
Length = 640
Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E F + + + S +G DG ++Y
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLMEKVPFYAIKGSPVFESPLGLFNPDEDGAILEEDY 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IP RR S + + ++ G + S R V +++ +A+ K+ G
Sbjct: 162 GIP----------RRYLRSIMSPWATKRLNEFGGDISQFRVVKLYPSILNQIAIAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|284046469|ref|YP_003396809.1| ABC transporter [Conexibacter woesei DSM 14684]
gi|283950690|gb|ADB53434.1| ABC transporter related protein [Conexibacter woesei DSM 14684]
Length = 295
Score = 40.4 bits (93), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 84/218 (38%), Gaps = 55/218 (25%)
Query: 106 LLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGT---------------- 149
L LIGP G GK++L+ ++++ E K AS + ++ DGT
Sbjct: 77 LALIGPSGCGKTTLLRSLNRLTELTKTASMKGRIAL-----DGTDIATLEPTALRRRVTM 131
Query: 150 YFLQEYTIPRGVRHG------ELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFV 203
F Q P V E RR LR+ ++ + G V ++
Sbjct: 132 VFQQPNPFPMSVFDNVAYVLREQASRRPRKRELRSAVQSALERAGLWEEVAGDLSHPALR 191
Query: 204 VDG-----LAVLKSMEGDSDV----------EKQYNQIVATTFNCPYLSFRDDKPVVVVT 248
+ G L + +++ D +V + Q Q++ ++ R+ VV+VT
Sbjct: 192 LSGGQQQRLCIARALAADPEVLLLDEPCSALDPQSTQVIEELI----VTLREQVAVVIVT 247
Query: 249 HGDLLSLTDRARIR-----TYLGELLGIPPAKQIFDIP 281
H +L RI YLGEL+ PA Q+F P
Sbjct: 248 H----NLQQAYRIADYVAFMYLGELVEYGPADQVFGAP 281
>gi|418155891|ref|ZP_12792616.1| ABC transporter family protein [Streptococcus pneumoniae GA16242]
gi|353819597|gb|EHD99789.1| ABC transporter family protein [Streptococcus pneumoniae GA16242]
Length = 343
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 9/73 (12%)
Query: 68 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTTS----LLLIGPKGSGKSS 118
IGS+ K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 83 IGSIGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATAHADQRVAIVGPTGAGKTT 142
Query: 119 LVNRISKVFENDK 131
+VN + K +E DK
Sbjct: 143 IVNLLMKFYEIDK 155
>gi|374608582|ref|ZP_09681380.1| ABC transporter related protein [Mycobacterium tusciae JS617]
gi|373553168|gb|EHP79763.1| ABC transporter related protein [Mycobacterium tusciae JS617]
Length = 242
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 79 LSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDK 131
LS+ P A + V D D P T+ +IGP GSGKS+L+ +++++E ++
Sbjct: 13 LSFGPNAVLRGV------DIDAPAGTTTAVIGPSGSGKSTLLRTLNRLYEPER 59
>gi|431928746|ref|YP_007241780.1| Ser protein kinase [Pseudomonas stutzeri RCH2]
gi|431827033|gb|AGA88150.1| putative Ser protein kinase [Pseudomonas stutzeri RCH2]
Length = 640
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 53/123 (43%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E F + + + S +G D ++Y
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLMERVPFYAIKGSPVFESPLGLFNPVEDAQILEEDY 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IP RR SS + + + G + S R V +++ +AV K+ G
Sbjct: 162 GIP----------RRYLSSIMSPWATKRLQEFGGDISKFRVVKLYPSILNQIAVAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|149007399|ref|ZP_01831042.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
SP18-BS74]
gi|417677632|ref|ZP_12327037.1| ABC transporter family protein [Streptococcus pneumoniae GA17545]
gi|418097049|ref|ZP_12734157.1| ABC transporter family protein [Streptococcus pneumoniae GA16531]
gi|418113243|ref|ZP_12750241.1| ABC transporter family protein [Streptococcus pneumoniae GA41538]
gi|418226289|ref|ZP_12852915.1| ABC transporter family protein [Streptococcus pneumoniae NP112]
gi|419467568|ref|ZP_14007448.1| cobW/HypB/UreG, nucleotide-binding domain protein [Streptococcus
pneumoniae GA05248]
gi|419513292|ref|ZP_14052924.1| cobW/HypB/UreG, nucleotide-binding domain protein [Streptococcus
pneumoniae GA05578]
gi|419517499|ref|ZP_14057113.1| cobW/HypB/UreG, nucleotide-binding domain protein [Streptococcus
pneumoniae GA02506]
gi|421284042|ref|ZP_15734826.1| ABC transporter family protein [Streptococcus pneumoniae GA04216]
gi|421299389|ref|ZP_15750075.1| ABC transporter family protein [Streptococcus pneumoniae GA60080]
gi|147760971|gb|EDK67940.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
SP18-BS74]
gi|332071905|gb|EGI82393.1| ABC transporter family protein [Streptococcus pneumoniae GA17545]
gi|353767611|gb|EHD48144.1| ABC transporter family protein [Streptococcus pneumoniae GA16531]
gi|353782174|gb|EHD62610.1| ABC transporter family protein [Streptococcus pneumoniae GA41538]
gi|353879855|gb|EHE59676.1| ABC transporter family protein [Streptococcus pneumoniae NP112]
gi|379542481|gb|EHZ07637.1| cobW/HypB/UreG, nucleotide-binding domain protein [Streptococcus
pneumoniae GA05248]
gi|379634457|gb|EHZ99022.1| cobW/HypB/UreG, nucleotide-binding domain protein [Streptococcus
pneumoniae GA05578]
gi|379637791|gb|EIA02341.1| cobW/HypB/UreG, nucleotide-binding domain protein [Streptococcus
pneumoniae GA02506]
gi|395879833|gb|EJG90889.1| ABC transporter family protein [Streptococcus pneumoniae GA04216]
gi|395899404|gb|EJH10345.1| ABC transporter family protein [Streptococcus pneumoniae GA60080]
Length = 343
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 9/73 (12%)
Query: 68 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTTS----LLLIGPKGSGKSS 118
IGS+ K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 83 IGSIGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATAHAGQRVAIVGPTGAGKTT 142
Query: 119 LVNRISKVFENDK 131
+VN + K +E DK
Sbjct: 143 IVNLLMKFYEIDK 155
>gi|452876505|ref|ZP_21953856.1| PrkA family serine protein kinase [Pseudomonas aeruginosa VRFPA01]
gi|452186673|gb|EME13691.1| PrkA family serine protein kinase [Pseudomonas aeruginosa VRFPA01]
Length = 640
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E F + + + S +G DG ++Y
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLMEKVPFYAIKGSPVFESPLGLFNPDEDGAILEEDY 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IP RR S + + ++ G + S R V +++ +A+ K+ G
Sbjct: 162 GIP----------RRYLRSIMSPWATKRLNEFGGDISQFRVVKLYPSILNQVAIAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|421207406|ref|ZP_15664454.1| ABC transporter family protein [Streptococcus pneumoniae 2090008]
gi|421230525|ref|ZP_15687186.1| ABC transporter family protein [Streptococcus pneumoniae 2061376]
gi|421292792|ref|ZP_15743524.1| ABC transporter family protein [Streptococcus pneumoniae GA56348]
gi|421311091|ref|ZP_15761703.1| ABC transporter family protein [Streptococcus pneumoniae GA58981]
gi|444410264|ref|ZP_21206807.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PNI0076]
gi|444412645|ref|ZP_21208966.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PNI0153]
gi|444422815|ref|ZP_21218456.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PNI0446]
gi|395572978|gb|EJG33570.1| ABC transporter family protein [Streptococcus pneumoniae 2090008]
gi|395593029|gb|EJG53282.1| ABC transporter family protein [Streptococcus pneumoniae 2061376]
gi|395891353|gb|EJH02351.1| ABC transporter family protein [Streptococcus pneumoniae GA56348]
gi|395913470|gb|EJH24322.1| ABC transporter family protein [Streptococcus pneumoniae GA58981]
gi|444274607|gb|ELU80254.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PNI0153]
gi|444277947|gb|ELU83435.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PNI0076]
gi|444287845|gb|ELU92754.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PNI0446]
Length = 323
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 9/73 (12%)
Query: 68 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTTS----LLLIGPKGSGKSS 118
IGS+ K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 83 IGSIGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATAHAGQRVAIVGPTGAGKTT 142
Query: 119 LVNRISKVFENDK 131
+VN + K +E DK
Sbjct: 143 IVNLLMKFYEIDK 155
>gi|152984312|ref|YP_001346126.1| hypothetical protein PSPA7_0731 [Pseudomonas aeruginosa PA7]
gi|150959470|gb|ABR81495.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
Length = 640
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E F + + + S +G DG ++Y
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLMEKVPFYAIKGSPVFESPLGLFNPDEDGAILEEDY 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IP RR S + + ++ G + S R V +++ +A+ K+ G
Sbjct: 162 GIP----------RRYLRSIMSPWATKRLNEFGGDISQFRVVKLYPSILNQVAIAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|421619270|ref|ZP_16060231.1| PrkA family serine protein kinase [Pseudomonas stutzeri KOS6]
gi|409778739|gb|EKN58425.1| PrkA family serine protein kinase [Pseudomonas stutzeri KOS6]
Length = 640
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E+ F + + + S +G D ++Y
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLMEHVPFYAIKGSPVFESPLGLFNPVEDAQILEEDY 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IP RR +S + + + G + S R V +++ +AV K+ G
Sbjct: 162 GIP----------RRYLNSIMSPWATKRLQEFGGDISKFRVVKLYPSILNQIAVAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|452748439|ref|ZP_21948218.1| PrkA family serine protein kinase [Pseudomonas stutzeri NF13]
gi|452007613|gb|EMD99866.1| PrkA family serine protein kinase [Pseudomonas stutzeri NF13]
Length = 640
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E+ F + + + S +G D ++Y
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLMEHVPFYAIKGSPVFESPLGLFNPAEDAQILEEDY 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IP RR +S + + + G + S R V +++ +AV K+ G
Sbjct: 162 GIP----------RRYLNSIMSPWATKRLQEFGGDISQFRVVKLYPSILNQIAVAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|108802343|ref|YP_642540.1| ABC transporter-like protein [Mycobacterium sp. MCS]
gi|119871496|ref|YP_941448.1| ABC transporter-like protein [Mycobacterium sp. KMS]
gi|108772762|gb|ABG11484.1| amino acid ABC transporter ATP-binding protein, PAAT family
[Mycobacterium sp. MCS]
gi|119697585|gb|ABL94658.1| amino acid ABC transporter ATP-binding protein, PAAT family
[Mycobacterium sp. KMS]
Length = 247
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 26/35 (74%)
Query: 97 DYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDK 131
D DVP T+ +IGP GSGKS+L+ +++++E D+
Sbjct: 30 DIDVPAGTTAAVIGPSGSGKSTLLRTLNRLYEPDR 64
>gi|126438323|ref|YP_001074014.1| ABC transporter-like protein [Mycobacterium sp. JLS]
gi|126238123|gb|ABO01524.1| amino acid ABC transporter ATP-binding protein, PAAT family
[Mycobacterium sp. JLS]
Length = 247
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 26/35 (74%)
Query: 97 DYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDK 131
D DVP T+ +IGP GSGKS+L+ +++++E D+
Sbjct: 30 DIDVPAGTTAAVIGPSGSGKSTLLRTLNRLYEPDR 64
>gi|189514425|ref|XP_001919750.1| PREDICTED: interferon-induced protein 44-like [Danio rerio]
Length = 296
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 44/78 (56%), Gaps = 11/78 (14%)
Query: 86 WIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSV 145
W+EN +T S+ DV K +L++GP G+GKSS +N I+ F+ S +A V NS+
Sbjct: 40 WLEN---LTPSNPDV-KDIKILVVGPAGAGKSSFINSINSAFQG--HISSKALV--NSAG 91
Query: 146 GDGTYF---LQEYTIPRG 160
G F L+ +TI G
Sbjct: 92 GFSHSFTEKLKGFTIKNG 109
>gi|383822708|ref|ZP_09977925.1| polar amino acid ABC transporter ATPase [Mycobacterium phlei
RIVM601174]
gi|383330795|gb|EID09315.1| polar amino acid ABC transporter ATPase [Mycobacterium phlei
RIVM601174]
Length = 244
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 26/35 (74%)
Query: 97 DYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDK 131
D DVP T+ +IGP GSGKS+L+ +++++E D+
Sbjct: 27 DIDVPAGTTTAVIGPSGSGKSTLLRTLNRLYEPDR 61
>gi|92113009|ref|YP_572937.1| putative serine protein kinase PrkA [Chromohalobacter salexigens
DSM 3043]
gi|91796099|gb|ABE58238.1| putative serine protein kinase, PrkA [Chromohalobacter salexigens
DSM 3043]
Length = 640
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL R+ + E+ F + + + S +G DG +EY
Sbjct: 102 KKQILYLLGPVGGGKSSLAERLKLLMEHVPFYAIKGSPVFESPLGLFSPEEDGELLEKEY 161
Query: 156 TIPR 159
IPR
Sbjct: 162 GIPR 165
>gi|374703440|ref|ZP_09710310.1| PrkA family serine protein kinase [Pseudomonas sp. S9]
Length = 640
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 52/123 (42%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ + E F + + + S +G DG +EY
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKHLMEKVPFYAIKDSPVFESPLGLFSDAEDGAILEEEY 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IP RR +S + + + G + S R V ++ +AV K+ G
Sbjct: 162 GIP----------RRYLNSIMSPWATKRLAEFGGDISQFRVVKLYPSILKQIAVAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|226946694|ref|YP_002801767.1| serine protein kinase PrkA [Azotobacter vinelandii DJ]
gi|226721621|gb|ACO80792.1| serine protein kinase; PrkA [Azotobacter vinelandii DJ]
Length = 640
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNAAEDGEILEEDF 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IP RR S+ + + ++ G + S R V +++ +AV K+ G
Sbjct: 162 GIP----------RRYLSTIMSPWATKRLNEFGGDISQFRVVKLYPSILNQIAVAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|303281168|ref|XP_003059876.1| ATP-binding cassette superfamily [Micromonas pusilla CCMP1545]
gi|226458531|gb|EEH55828.1| ATP-binding cassette superfamily [Micromonas pusilla CCMP1545]
Length = 540
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%), Gaps = 7/61 (11%)
Query: 97 DYDVPKTTSLLLIGPKGSGKSSLVNRISKVFEN---DKFASERAQVTYNSSVGDGTYFLQ 153
DY++PK S+L++GP G+GK+SL+ ++ ++E + S A + N +G YF+
Sbjct: 336 DYELPKRGSVLVMGPSGAGKTSLLRAVAGLWEQGDGEATTSTAASIAEN----NGMYFVP 391
Query: 154 E 154
+
Sbjct: 392 Q 392
>gi|302670549|ref|YP_003830509.1| ABC transporter ATP-binding protein/permease [Butyrivibrio
proteoclasticus B316]
gi|302395022|gb|ADL33927.1| ABC transporter ATP-binding/permease protein [Butyrivibrio
proteoclasticus B316]
Length = 604
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 43/70 (61%), Gaps = 13/70 (18%)
Query: 94 TLSDYD--VPKTTSLLLIGPKGSGKSSLVNRISKVFENDKF--------ASERAQVTYNS 143
L+D++ VP+ T++ ++G G+GKS+LVN + + F+ K A+ER+Q+ +S
Sbjct: 373 VLTDFNLKVPQGTNVAIVGETGAGKSTLVNLVCRFFKPTKGQVLIDGRDAAERSQLWLHS 432
Query: 144 SVGDGTYFLQ 153
++G Y LQ
Sbjct: 433 NIG---YVLQ 439
>gi|322435027|ref|YP_004217239.1| ABC transporter [Granulicella tundricola MP5ACTX9]
gi|321162754|gb|ADW68459.1| ABC transporter related protein [Granulicella tundricola MP5ACTX9]
Length = 582
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 7/56 (12%)
Query: 75 KNKILSYTPGA-WIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFEN 129
+N +Y PG + N+ + +P TSL ++GP GSGKS+LVN I +++++
Sbjct: 340 RNLNFAYNPGTPVLHNI------NLRIPAGTSLAIVGPTGSGKSTLVNLIPRLYDS 389
>gi|73541335|ref|YP_295855.1| ABC transporter [Ralstonia eutropha JMP134]
gi|72118748|gb|AAZ61011.1| ABC transporter related protein [Ralstonia eutropha JMP134]
Length = 570
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 42/85 (49%), Gaps = 21/85 (24%)
Query: 62 DQLRTRIGSLTDAKNKILSYTPGAWIENVGGMTLS---------DYD----------VPK 102
D+L T SL A ++L PG I++ G TLS DYD V K
Sbjct: 325 DRLATFASSL--AHTRVLRRKPGGRIDHQRGDTLSLEHLTLHTPDYDRTLLKDLNVTVGK 382
Query: 103 TTSLLLIGPKGSGKSSLVNRISKVF 127
SLL+IGP G GKSSL+ IS ++
Sbjct: 383 GQSLLIIGPSGGGKSSLMRAISGLW 407
>gi|88800255|ref|ZP_01115822.1| Putative Serine protein kinase, PrkA [Reinekea blandensis MED297]
gi|88776970|gb|EAR08178.1| Putative Serine protein kinase, PrkA [Reinekea sp. MED297]
Length = 640
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 51/123 (41%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL R+ ++ E F + + + S +G D +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAERLKQLMERVPFYAIKGSPVFESPLGLFDPGEDAQLLEEKF 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IP R S + + H G + S R V V+D +A+ K+ G
Sbjct: 162 GIP----------PRYLGSIMSPWAVKRLHDYGGDISQFRVVKLYPSVIDQIAIAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|359780758|ref|ZP_09283983.1| PrkA family serine protein kinase [Pseudomonas psychrotolerans L19]
gi|359370818|gb|EHK71384.1| PrkA family serine protein kinase [Pseudomonas psychrotolerans L19]
Length = 640
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 54/123 (43%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ + E F + + + S +G DG ++Y
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKHLIEKIPFYAIKGSPVFESPLGLFNPDEDGQILEEDY 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IPR +R S R++ + G + S R V +++ +A+ K+ G
Sbjct: 162 GIPRH------YLRSIMSPWAAKRLQ----EFGGDISKFRVVKLYPSILNQIAIAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|325954670|ref|YP_004238330.1| iron-chelate-transporting ATPase [Weeksella virosa DSM 16922]
gi|323437288|gb|ADX67752.1| Iron-chelate-transporting ATPase [Weeksella virosa DSM 16922]
Length = 253
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 98 YDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDK 131
+D+PK LIGP G+GKS+L++ IS++ E DK
Sbjct: 22 FDIPKNQITSLIGPNGAGKSTLLSIISRLIEKDK 55
>gi|408373903|ref|ZP_11171595.1| PrkA family serine protein kinase [Alcanivorax hongdengensis
A-11-3]
gi|407766191|gb|EKF74636.1| PrkA family serine protein kinase [Alcanivorax hongdengensis
A-11-3]
Length = 640
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 53/123 (43%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ + + F + + +S + DG +EY
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKSLMQRVPFYAIKGSPVNDSPLSLFDPEEDGPILEEEY 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IP+ IR S R+ H+ G + S R V ++D +AV K+ G
Sbjct: 162 GIPKR------YIRTIMSPWAVKRL----HEFGGDISQFRVVKLYPSILDQIAVAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|422340686|ref|ZP_16421627.1| ABC transporter [Treponema denticola F0402]
gi|325475414|gb|EGC78596.1| ABC transporter [Treponema denticola F0402]
Length = 588
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 26/35 (74%)
Query: 96 SDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFEND 130
+D+ VP+ TS ++GP GSGK++L N I++ ++ D
Sbjct: 359 ADFTVPQKTSCAIVGPSGSGKTTLCNLIARFWDVD 393
>gi|449103732|ref|ZP_21740475.1| hypothetical protein HMPREF9730_01372 [Treponema denticola AL-2]
gi|448964185|gb|EMB44857.1| hypothetical protein HMPREF9730_01372 [Treponema denticola AL-2]
Length = 588
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 26/35 (74%)
Query: 96 SDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFEND 130
+D+ VP+ TS ++GP GSGK++L N I++ ++ D
Sbjct: 359 ADFTVPQKTSCAIVGPSGSGKTTLCNLIARFWDVD 393
>gi|449130104|ref|ZP_21766330.1| hypothetical protein HMPREF9724_00995 [Treponema denticola SP37]
gi|448943850|gb|EMB24733.1| hypothetical protein HMPREF9724_00995 [Treponema denticola SP37]
Length = 588
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 26/35 (74%)
Query: 96 SDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFEND 130
+D+ VP+ TS ++GP GSGK++L N I++ ++ D
Sbjct: 359 ADFTVPQKTSCAIVGPSGSGKTTLCNLIARFWDVD 393
>gi|409395481|ref|ZP_11246551.1| PrkA family serine protein kinase [Pseudomonas sp. Chol1]
gi|409395576|ref|ZP_11246641.1| PrkA family serine protein kinase [Pseudomonas sp. Chol1]
gi|409119842|gb|EKM96215.1| PrkA family serine protein kinase [Pseudomonas sp. Chol1]
gi|409119863|gb|EKM96235.1| PrkA family serine protein kinase [Pseudomonas sp. Chol1]
Length = 640
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E F + + + S +G D ++Y
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLMERVPFYAIKGSPVFESPLGLFNPTEDAQILEEDY 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IP RR +S + + + G + S R V +++ +AV K+ G
Sbjct: 162 GIP----------RRYLNSIMSPWATKRLQEFGGDISQFRVVKLYPSILNQIAVAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|449127058|ref|ZP_21763332.1| hypothetical protein HMPREF9733_00735 [Treponema denticola SP33]
gi|448944726|gb|EMB25603.1| hypothetical protein HMPREF9733_00735 [Treponema denticola SP33]
Length = 586
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 26/35 (74%)
Query: 96 SDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFEND 130
+D+ VP+ TS ++GP GSGK++L N I++ ++ D
Sbjct: 359 ADFTVPQKTSCAIVGPSGSGKTTLCNLIARFWDVD 393
>gi|378953240|ref|YP_005210728.1| protein PrkA [Pseudomonas fluorescens F113]
gi|359763254|gb|AEV65333.1| PrkA [Pseudomonas fluorescens F113]
Length = 640
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IP RR S+ + + + G + S R V +++ +AV K+ G
Sbjct: 162 GIP----------RRYLSTIMSPWATKRLAEFGGDISQFRVVKLYPSILNQIAVAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|320167460|gb|EFW44359.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 224
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 87 IENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG 146
+ ++ G L +P TT+L+L G KGSGKS+L+ + V + AS VT + G
Sbjct: 54 LADLTGYALGTLQLPNTTALVLTGGKGSGKSALLMELLGVATGSQAAS----VTAATEGG 109
Query: 147 DGTYFLQEY--TIPRG 160
G+ L T+P G
Sbjct: 110 SGSVTLPRILATLPSG 125
>gi|449125087|ref|ZP_21761403.1| hypothetical protein HMPREF9723_01447 [Treponema denticola OTK]
gi|448940271|gb|EMB21180.1| hypothetical protein HMPREF9723_01447 [Treponema denticola OTK]
Length = 588
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 26/35 (74%)
Query: 96 SDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFEND 130
+D+ VP+ TS ++GP GSGK++L N I++ ++ D
Sbjct: 359 ADFTVPQKTSCAIVGPSGSGKTTLCNLIARFWDVD 393
>gi|357020456|ref|ZP_09082687.1| ABC transporter-like protein [Mycobacterium thermoresistibile ATCC
19527]
gi|356478204|gb|EHI11341.1| ABC transporter-like protein [Mycobacterium thermoresistibile ATCC
19527]
Length = 245
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 79 LSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDK 131
L++ P + V D +VP T+ +IGP GSGKS+L+ +++++E D+
Sbjct: 16 LAFGPNKVLRGV------DLEVPAGTTAAVIGPSGSGKSTLLRTLNRLYEPDR 62
>gi|320527754|ref|ZP_08028924.1| ABC transporter, ATP-binding protein [Solobacterium moorei F0204]
gi|320131919|gb|EFW24479.1| ABC transporter, ATP-binding protein [Solobacterium moorei F0204]
Length = 604
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 13/71 (18%)
Query: 93 MTLSDY--DVPKTTSLLLIGPKGSGKSSLVNRISKVFE--------NDKFASERAQVTYN 142
M L ++ DVP T++ ++G G+GKS+LVN + + FE + + ER+Q+ +
Sbjct: 373 MVLENFNLDVPHGTNVAIVGETGAGKSTLVNLVCRFFEPTRGQVLIDGRDVRERSQLWLH 432
Query: 143 SSVGDGTYFLQ 153
S++G Y LQ
Sbjct: 433 SNIG---YVLQ 440
>gi|429211573|ref|ZP_19202738.1| putative protein kinase [Pseudomonas sp. M1]
gi|428156055|gb|EKX02603.1| putative protein kinase [Pseudomonas sp. M1]
Length = 640
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K + L+GP G GKSSL ++ ++ E F + + + S +G DG ++Y
Sbjct: 102 KKQIIYLLGPVGGGKSSLAEKLKQLMEKVPFYAIKGSPVFESPLGLFNPDEDGAILEEDY 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IP RR S + + ++ G + S R V +++ +A+ K+ G
Sbjct: 162 GIP----------RRYLRSIMSPWATKRLNEFGGDISQFRVVKLHPSILNQIAIAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|431800449|ref|YP_007227352.1| PrkA family serine protein kinase [Pseudomonas putida HB3267]
gi|430791214|gb|AGA71409.1| PrkA family serine protein kinase [Pseudomonas putida HB3267]
Length = 640
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 56/123 (45%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +E+
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLMEKVPFYAIKGSPVFESPLGLFNATEDGAILEEEF 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IPR R+ ++ + L+ + G + S + V +++ +A+ K+ G
Sbjct: 162 GIPR--RYLNTIMSPWATKRLQ--------EFGGDISKFKVVKLYPSILNQIAIAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|104779697|ref|YP_606195.1| serine protein kinase [Pseudomonas entomophila L48]
gi|95108684|emb|CAK13378.1| putative serine protein kinase [Pseudomonas entomophila L48]
Length = 640
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E F + + + S +G DG ++Y
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLMERVPFYAIKGSPVFESPLGLFNATEDGAILEEDY 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IPR R+ ++ + L + G + S R V +++ +A+ K+ G
Sbjct: 162 GIPR--RYLNTIMSPWATKRL--------AEFGGDISQFRVVKLYPSILNQIAIAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|338996725|ref|ZP_08635435.1| PrkA family serine protein kinase [Halomonas sp. TD01]
gi|338766366|gb|EGP21288.1| PrkA family serine protein kinase [Halomonas sp. TD01]
Length = 640
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 16/119 (13%)
Query: 106 LLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEYTIPR 159
L L+GP G GKSSL R+ + E F + + Y S +G DG +EY IP+
Sbjct: 106 LYLLGPVGGGKSSLAERLKLLMERIPFYAIKDSPVYESPLGLFSPEEDGELLEKEYGIPQ 165
Query: 160 GVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEGDSD 218
RH +R S R++ + G + S R V ++ +A+ K+ GD +
Sbjct: 166 --RH----LRSVMSPWAAKRLK----EAGGDISQFRVVRLYPSRLNQIAISKTEPGDEN 214
>gi|26987139|ref|NP_742564.1| serine protein kinase PrkA [Pseudomonas putida KT2440]
gi|148545683|ref|YP_001265785.1| putative serine protein kinase PrkA [Pseudomonas putida F1]
gi|386010057|ref|YP_005928334.1| hypothetical protein PPUBIRD1_0435 [Pseudomonas putida BIRD-1]
gi|395446777|ref|YP_006387030.1| serine protein kinase, PrkA [Pseudomonas putida ND6]
gi|397694915|ref|YP_006532796.1| hypothetical protein T1E_2156 [Pseudomonas putida DOT-T1E]
gi|421524951|ref|ZP_15971572.1| PrkA family serine protein kinase [Pseudomonas putida LS46]
gi|24981771|gb|AAN66028.1|AE016232_1 conserved hypothetical protein [Pseudomonas putida KT2440]
gi|148509741|gb|ABQ76601.1| putative serine protein kinase, PrkA [Pseudomonas putida F1]
gi|313496763|gb|ADR58129.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
gi|388560774|gb|AFK69915.1| serine protein kinase, PrkA [Pseudomonas putida ND6]
gi|397331645|gb|AFO48004.1| Uncharacterized protein yeaG [Pseudomonas putida DOT-T1E]
gi|402751414|gb|EJX11927.1| PrkA family serine protein kinase [Pseudomonas putida LS46]
Length = 640
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 56/123 (45%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +E+
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLMEKVPFYAIKGSPVFESPLGLFNATEDGAILEEEF 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IPR R+ ++ + L+ + G + S + V +++ +A+ K+ G
Sbjct: 162 GIPR--RYLNTIMSPWATKRLQ--------EFGGDISKFKVVKLYPSILNQIAIAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|359785200|ref|ZP_09288355.1| PrkA family serine protein kinase [Halomonas sp. GFAJ-1]
gi|359297498|gb|EHK61731.1| PrkA family serine protein kinase [Halomonas sp. GFAJ-1]
Length = 640
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Query: 106 LLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEYTIP 158
L L+GP G GKSSL R+ + E F + + Y S +G DG QEY IP
Sbjct: 106 LYLLGPVGGGKSSLAERLKLLMERIPFYAIKDSPVYESPLGLFSPEEDGELLEQEYGIP 164
>gi|167031444|ref|YP_001666675.1| putative serine protein kinase PrkA [Pseudomonas putida GB-1]
gi|166857932|gb|ABY96339.1| putative serine protein kinase, PrkA [Pseudomonas putida GB-1]
Length = 640
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 56/123 (45%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +E+
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLMEKVPFYAIKGSPVFESPLGLFNATEDGAILEEEF 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IPR R+ ++ + L+ + G + S + V +++ +A+ K+ G
Sbjct: 162 GIPR--RYLNTIMSPWATKRLQ--------EFGGDISKFKVVKLYPSILNQIAIAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|94968542|ref|YP_590590.1| ABC transporter ATPase [Candidatus Koribacter versatilis Ellin345]
gi|94550592|gb|ABF40516.1| ABC transporter, ATPase subunit [Candidatus Koribacter versatilis
Ellin345]
Length = 591
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 97 DYDVPKTTSLLLIGPKGSGKSSLVNRISKVFE 128
+ VP TSL ++GP GSGKS+LVN I ++++
Sbjct: 367 NLTVPAGTSLAIVGPTGSGKSTLVNLIPRIYD 398
>gi|15901742|ref|NP_346346.1| ABC transporter ATP-binding protein [Streptococcus pneumoniae
TIGR4]
gi|149012495|ref|ZP_01833526.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
SP19-BS75]
gi|149021875|ref|ZP_01835862.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
SP23-BS72]
gi|418103609|ref|ZP_12740680.1| ABC transporter family protein [Streptococcus pneumoniae NP070]
gi|418131079|ref|ZP_12767961.1| ABC transporter family protein [Streptococcus pneumoniae GA07643]
gi|418187909|ref|ZP_12824430.1| ABC transporter family protein [Streptococcus pneumoniae GA47360]
gi|418230706|ref|ZP_12857304.1| ABC transporter family protein [Streptococcus pneumoniae EU-NP01]
gi|419476253|ref|ZP_14016087.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA14688]
gi|419478566|ref|ZP_14018388.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA18068]
gi|419487395|ref|ZP_14027156.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA44128]
gi|421242401|ref|ZP_15698926.1| ABC transporter family protein [Streptococcus pneumoniae 2081074]
gi|421246171|ref|ZP_15702662.1| ABC transporter family protein [Streptococcus pneumoniae 2082170]
gi|421271348|ref|ZP_15722200.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
SPAR48]
gi|14973421|gb|AAK75986.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
TIGR4]
gi|147763551|gb|EDK70487.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
SP19-BS75]
gi|147929913|gb|EDK80901.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
SP23-BS72]
gi|353774388|gb|EHD54879.1| ABC transporter family protein [Streptococcus pneumoniae NP070]
gi|353801305|gb|EHD81609.1| ABC transporter family protein [Streptococcus pneumoniae GA07643]
gi|353848790|gb|EHE28801.1| ABC transporter family protein [Streptococcus pneumoniae GA47360]
gi|353884828|gb|EHE64621.1| ABC transporter family protein [Streptococcus pneumoniae EU-NP01]
gi|379557833|gb|EHZ22871.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA14688]
gi|379563844|gb|EHZ28842.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA18068]
gi|379585031|gb|EHZ49892.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA44128]
gi|395611532|gb|EJG71604.1| ABC transporter family protein [Streptococcus pneumoniae 2081074]
gi|395616290|gb|EJG76301.1| ABC transporter family protein [Streptococcus pneumoniae 2082170]
gi|395866098|gb|EJG77230.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
SPAR48]
Length = 343
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 68 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTT----SLLLIGPKGSGKSS 118
IGS K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 83 IGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATAHAGQKVAIVGPTGAGKTT 142
Query: 119 LVNRISKVFENDK 131
+VN + K +E DK
Sbjct: 143 IVNLLMKFYEIDK 155
>gi|165971673|gb|AAI58759.1| Ifi44 protein [Rattus norvegicus]
Length = 377
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 52/123 (42%), Gaps = 38/123 (30%)
Query: 27 IPLLSGD---DEGSRDSWDSLVDQRRRDAVFREVLQSYDQLRTRIGSLTDAKNKILSYTP 83
+P LSGD E D L+D+R+ + +G ++ + + +Y P
Sbjct: 129 LPSLSGDTFIQECEAFRCDELLDERKTRGI--------------VGLCSNLLDALRNYKP 174
Query: 84 GAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNS 143
D+ T +LL+GP G+GKSS VN + VF + +T+ +
Sbjct: 175 YG-------------DLVHQTRILLLGPIGAGKSSFVNSVKSVF--------KGSITHQA 213
Query: 144 SVG 146
SVG
Sbjct: 214 SVG 216
>gi|111657343|ref|ZP_01408102.1| hypothetical protein SpneT_02001446 [Streptococcus pneumoniae
TIGR4]
Length = 343
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 68 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTT----SLLLIGPKGSGKSS 118
IGS K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 83 IGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATAHAGQKVAIVGPTGAGKTT 142
Query: 119 LVNRISKVFENDK 131
+VN + K +E DK
Sbjct: 143 IVNLLMKFYEIDK 155
>gi|348669739|gb|EGZ09561.1| hypothetical protein PHYSODRAFT_522675 [Phytophthora sojae]
Length = 1360
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 101 PKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSS 144
P T +L+L G GSGKSS + +S F NDK + QVTYN +
Sbjct: 107 PGTITLVL-GQPGSGKSSFMKLLSSRFPNDKNVTMEGQVTYNGT 149
>gi|90020380|ref|YP_526207.1| putative serine protein kinase PrkA [Saccharophagus degradans 2-40]
gi|89949980|gb|ABD79995.1| putative serine protein kinase, PrkA [Saccharophagus degradans
2-40]
Length = 640
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 53/119 (44%), Gaps = 16/119 (13%)
Query: 106 LLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEYTIPR 159
L L+GP G GKSSL ++ + E + + S +G DGT ++Y IP
Sbjct: 106 LYLLGPVGGGKSSLAEKLKSLIEKRPIYYLKGSPVFESPLGLFDPEEDGTILKEDYGIPN 165
Query: 160 GVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEGDSD 218
R+ + ++ + L H+ G + S R V V+D +AV K+ GD +
Sbjct: 166 --RYVKTIMSPWAAKRL--------HEFGGDISKFRVVKKHPSVLDQIAVSKTEPGDEN 214
>gi|421209684|ref|ZP_15666695.1| ABC transporter family protein [Streptococcus pneumoniae 2070005]
gi|421225760|ref|ZP_15682496.1| ABC transporter family protein [Streptococcus pneumoniae 2070768]
gi|395572339|gb|EJG32936.1| ABC transporter family protein [Streptococcus pneumoniae 2070005]
gi|395588453|gb|EJG48782.1| ABC transporter family protein [Streptococcus pneumoniae 2070768]
Length = 343
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 68 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTT----SLLLIGPKGSGKSS 118
IGS K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 83 IGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATAHAGQKVAIVGPTGAGKTT 142
Query: 119 LVNRISKVFENDK 131
+VN + K +E DK
Sbjct: 143 IVNLLMKFYEIDK 155
>gi|348669736|gb|EGZ09558.1| hypothetical protein PHYSODRAFT_522513 [Phytophthora sojae]
Length = 1360
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 101 PKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSS 144
P T +L+L G GSGKSS + +S F NDK + QVTYN +
Sbjct: 107 PGTITLVL-GQPGSGKSSFMKLLSSRFPNDKNVTMEGQVTYNGT 149
>gi|15903776|ref|NP_359326.1| ABC transporter ATP-binding protein [Streptococcus pneumoniae R6]
gi|116516021|ref|YP_817147.1| ABC transporter ATP-binding protein [Streptococcus pneumoniae D39]
gi|421266897|ref|ZP_15717776.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
SPAR27]
gi|15459413|gb|AAL00537.1| ABC transporter ATP-binding protein - unknown substrate, truncation
[Streptococcus pneumoniae R6]
gi|116076597|gb|ABJ54317.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae D39]
gi|395865993|gb|EJG77126.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
SPAR27]
Length = 343
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 68 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTT----SLLLIGPKGSGKSS 118
IGS K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 83 IGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATAHAGQKVAIVGPTGAGKTT 142
Query: 119 LVNRISKVFENDK 131
+VN + K +E DK
Sbjct: 143 IVNLLMKFYEIDK 155
>gi|418185673|ref|ZP_12822211.1| ABC transporter family protein [Streptococcus pneumoniae GA47283]
gi|419511168|ref|ZP_14050808.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
NP141]
gi|419531006|ref|ZP_14070531.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA40028]
gi|421213851|ref|ZP_15670804.1| ABC transporter family protein [Streptococcus pneumoniae 2070108]
gi|421215992|ref|ZP_15672912.1| ABC transporter family protein [Streptococcus pneumoniae 2070109]
gi|353847577|gb|EHE27598.1| ABC transporter family protein [Streptococcus pneumoniae GA47283]
gi|379570801|gb|EHZ35761.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA40028]
gi|379630623|gb|EHZ95205.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
NP141]
gi|395578564|gb|EJG39079.1| ABC transporter family protein [Streptococcus pneumoniae 2070108]
gi|395579372|gb|EJG39872.1| ABC transporter family protein [Streptococcus pneumoniae 2070109]
Length = 343
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 68 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTT----SLLLIGPKGSGKSS 118
IGS K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 83 IGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATAHAGQKVAIVGPTGTGKTT 142
Query: 119 LVNRISKVFENDK 131
+VN + K +E DK
Sbjct: 143 IVNLLMKFYEIDK 155
>gi|392422723|ref|YP_006459327.1| PrkA family serine protein kinase [Pseudomonas stutzeri CCUG 29243]
gi|390984911|gb|AFM34904.1| PrkA family serine protein kinase [Pseudomonas stutzeri CCUG 29243]
Length = 640
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E+ F + + + S +G D ++Y
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLMEHVPFYAIKDSPVFESPLGLFNPIEDAQILEEDY 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IP RR +S + + + G + S R V +++ +AV K+ G
Sbjct: 162 GIP----------RRYLNSIMSPWATKRLQEFGGDISKFRVVKLYPSILNQIAVAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|418074773|ref|ZP_12712021.1| ABC transporter family protein [Streptococcus pneumoniae GA11184]
gi|418079367|ref|ZP_12716588.1| ABC transporter family protein [Streptococcus pneumoniae 4027-06]
gi|418081567|ref|ZP_12718775.1| ABC transporter family protein [Streptococcus pneumoniae 6735-05]
gi|418090296|ref|ZP_12727448.1| ABC transporter family protein [Streptococcus pneumoniae GA43265]
gi|418099261|ref|ZP_12736356.1| ABC transporter family protein [Streptococcus pneumoniae 6901-05]
gi|418106060|ref|ZP_12743114.1| ABC transporter family protein [Streptococcus pneumoniae GA44500]
gi|418115449|ref|ZP_12752434.1| ABC transporter family protein [Streptococcus pneumoniae 5787-06]
gi|418117609|ref|ZP_12754577.1| ABC transporter family protein [Streptococcus pneumoniae 6963-05]
gi|418135707|ref|ZP_12772559.1| ABC transporter family protein [Streptococcus pneumoniae GA11426]
gi|418174346|ref|ZP_12810956.1| ABC transporter family protein [Streptococcus pneumoniae GA41277]
gi|418217381|ref|ZP_12844059.1| ABC transporter family protein [Streptococcus pneumoniae
Netherlands15B-37]
gi|419432320|ref|ZP_13972449.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
EU-NP05]
gi|419434551|ref|ZP_13974667.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA40183]
gi|419441123|ref|ZP_13981165.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA40410]
gi|419465368|ref|ZP_14005258.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA04175]
gi|419469734|ref|ZP_14009600.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA06083]
gi|419498301|ref|ZP_14038006.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA47522]
gi|419535415|ref|ZP_14074912.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA17457]
gi|421281922|ref|ZP_15732717.1| ABC transporter family protein [Streptococcus pneumoniae GA04672]
gi|421310334|ref|ZP_15760958.1| ABC transporter family protein [Streptococcus pneumoniae GA62681]
gi|353745889|gb|EHD26554.1| ABC transporter family protein [Streptococcus pneumoniae GA11184]
gi|353745987|gb|EHD26651.1| ABC transporter family protein [Streptococcus pneumoniae 4027-06]
gi|353750693|gb|EHD31330.1| ABC transporter family protein [Streptococcus pneumoniae 6735-05]
gi|353760217|gb|EHD40795.1| ABC transporter family protein [Streptococcus pneumoniae GA43265]
gi|353768031|gb|EHD48557.1| ABC transporter family protein [Streptococcus pneumoniae 6901-05]
gi|353774932|gb|EHD55416.1| ABC transporter family protein [Streptococcus pneumoniae GA44500]
gi|353783951|gb|EHD64373.1| ABC transporter family protein [Streptococcus pneumoniae 5787-06]
gi|353787724|gb|EHD68125.1| ABC transporter family protein [Streptococcus pneumoniae 6963-05]
gi|353836843|gb|EHE16930.1| ABC transporter family protein [Streptococcus pneumoniae GA41277]
gi|353869869|gb|EHE49748.1| ABC transporter family protein [Streptococcus pneumoniae
Netherlands15B-37]
gi|353900329|gb|EHE75885.1| ABC transporter family protein [Streptococcus pneumoniae GA11426]
gi|379536242|gb|EHZ01432.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA04175]
gi|379543263|gb|EHZ08414.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA06083]
gi|379562616|gb|EHZ27626.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA17457]
gi|379575255|gb|EHZ40188.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA40183]
gi|379576408|gb|EHZ41333.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA40410]
gi|379598350|gb|EHZ63141.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA47522]
gi|379627783|gb|EHZ92392.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
EU-NP05]
gi|395879428|gb|EJG90487.1| ABC transporter family protein [Streptococcus pneumoniae GA04672]
gi|395908519|gb|EJH19397.1| ABC transporter family protein [Streptococcus pneumoniae GA62681]
Length = 343
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 68 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTT----SLLLIGPKGSGKSS 118
IGS K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 83 IGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATAHAGQKVAIVGPTGTGKTT 142
Query: 119 LVNRISKVFENDK 131
+VN + K +E DK
Sbjct: 143 IVNLLMKFYEIDK 155
>gi|254427334|ref|ZP_05041041.1| PrkA AAA domain family [Alcanivorax sp. DG881]
gi|196193503|gb|EDX88462.1| PrkA AAA domain family [Alcanivorax sp. DG881]
Length = 640
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 53/123 (43%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ + + F + + +S + DG +EY
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKALMQKVPFYALKGSPVNDSPLTLFNPEEDGPILEEEY 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IPR IR S R+ H+ G + S R V ++D +AV K+ G
Sbjct: 162 GIPRR------YIRTIMSPWAVKRL----HEFGGDLSQFRVVKRYPSILDQVAVAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|120406978|ref|YP_956807.1| ABC transporter--like protein [Mycobacterium vanbaalenii PYR-1]
gi|119959796|gb|ABM16801.1| amino acid ABC transporter ATP-binding protein, PAAT family
[Mycobacterium vanbaalenii PYR-1]
Length = 243
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 7/62 (11%)
Query: 70 SLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFEN 129
SLT AK+ LS+ A + V D DV +S +IGP GSGKS+L+ +++++E
Sbjct: 6 SLT-AKDIHLSFGKSAVLRGV------DLDVAAGSSTAVIGPSGSGKSTLLRTLNRLYEP 58
Query: 130 DK 131
D+
Sbjct: 59 DR 60
>gi|419494030|ref|ZP_14033754.1| istB-like ATP binding family protein [Streptococcus pneumoniae
GA47210]
gi|421290473|ref|ZP_15741222.1| ABC transporter family protein [Streptococcus pneumoniae GA54354]
gi|421305864|ref|ZP_15756517.1| ABC transporter family protein [Streptococcus pneumoniae GA62331]
gi|379592009|gb|EHZ56827.1| istB-like ATP binding family protein [Streptococcus pneumoniae
GA47210]
gi|395886202|gb|EJG97219.1| ABC transporter family protein [Streptococcus pneumoniae GA54354]
gi|395904293|gb|EJH15210.1| ABC transporter family protein [Streptococcus pneumoniae GA62331]
Length = 343
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 68 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTT----SLLLIGPKGSGKSS 118
IGS K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 83 IGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATAHAGQKVAIVGPTGTGKTT 142
Query: 119 LVNRISKVFENDK 131
+VN + K +E DK
Sbjct: 143 IVNLLMKFYEIDK 155
>gi|387627091|ref|YP_006063267.1| putative ABC transporter, ATP-binding/permease protein (pseudogene)
[Streptococcus pneumoniae INV104]
gi|417694789|ref|ZP_12343975.1| ABC transporter family protein [Streptococcus pneumoniae GA47901]
gi|444383187|ref|ZP_21181380.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PCS8106]
gi|444385872|ref|ZP_21183940.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PCS8203]
gi|301794877|emb|CBW37336.1| putative ABC transporter, ATP-binding/permease protein (pseudogene)
[Streptococcus pneumoniae INV104]
gi|332199942|gb|EGJ14016.1| ABC transporter family protein [Streptococcus pneumoniae GA47901]
gi|444248840|gb|ELU55339.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PCS8203]
gi|444250211|gb|ELU56693.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PCS8106]
Length = 343
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 68 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTT----SLLLIGPKGSGKSS 118
IGS K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 83 IGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATAHAGQKVAIVGPTGTGKTT 142
Query: 119 LVNRISKVFENDK 131
+VN + K +E DK
Sbjct: 143 IVNLLMKFYEIDK 155
>gi|182684863|ref|YP_001836610.1| ABC transporter ATP-binding protein [Streptococcus pneumoniae
CGSP14]
gi|303262445|ref|ZP_07348387.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
SP14-BS292]
gi|303269662|ref|ZP_07355419.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
BS458]
gi|387760023|ref|YP_006067001.1| putative ABC transporter, ATP-binding/permease protein (pseudogene)
[Streptococcus pneumoniae INV200]
gi|418140272|ref|ZP_12777095.1| ABC transporter family protein [Streptococcus pneumoniae GA13338]
gi|418181280|ref|ZP_12817848.1| ABC transporter family protein [Streptococcus pneumoniae GA41688]
gi|418200996|ref|ZP_12837437.1| ABC transporter family protein [Streptococcus pneumoniae GA47976]
gi|419515422|ref|ZP_14055046.1| ftsK/SpoIIIE family protein [Streptococcus pneumoniae England14-9]
gi|419524399|ref|ZP_14063971.1| ftsK/SpoIIIE family protein [Streptococcus pneumoniae GA13723]
gi|421296757|ref|ZP_15747463.1| ABC transporter family protein [Streptococcus pneumoniae GA58581]
gi|182630197|gb|ACB91145.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
CGSP14]
gi|301802612|emb|CBW35374.1| putative ABC transporter, ATP-binding/permease protein (pseudogene)
[Streptococcus pneumoniae INV200]
gi|302636345|gb|EFL66838.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
SP14-BS292]
gi|302640802|gb|EFL71192.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
BS458]
gi|353842106|gb|EHE22154.1| ABC transporter family protein [Streptococcus pneumoniae GA41688]
gi|353863563|gb|EHE43486.1| ABC transporter family protein [Streptococcus pneumoniae GA47976]
gi|353904522|gb|EHE79990.1| ABC transporter family protein [Streptococcus pneumoniae GA13338]
gi|379555766|gb|EHZ20831.1| ftsK/SpoIIIE family protein [Streptococcus pneumoniae GA13723]
gi|379635109|gb|EHZ99669.1| ftsK/SpoIIIE family protein [Streptococcus pneumoniae England14-9]
gi|395893743|gb|EJH04726.1| ABC transporter family protein [Streptococcus pneumoniae GA58581]
Length = 343
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 68 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTT----SLLLIGPKGSGKSS 118
IGS K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 83 IGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATAHAGQKVAIVGPTGAGKTT 142
Query: 119 LVNRISKVFENDK 131
+VN + K +E DK
Sbjct: 143 IVNLLMKFYEIDK 155
>gi|419443393|ref|ZP_13983415.1| ftsK/SpoIIIE family protein [Streptococcus pneumoniae GA13224]
gi|379549591|gb|EHZ14697.1| ftsK/SpoIIIE family protein [Streptococcus pneumoniae GA13224]
Length = 343
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 68 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTT----SLLLIGPKGSGKSS 118
IGS K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 83 IGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATAHAGQKVAIVGPTGAGKTT 142
Query: 119 LVNRISKVFENDK 131
+VN + K +E DK
Sbjct: 143 IVNLLMKFYEIDK 155
>gi|418149266|ref|ZP_12786027.1| ABC transporter family protein [Streptococcus pneumoniae GA13856]
gi|353811049|gb|EHD91295.1| ABC transporter family protein [Streptococcus pneumoniae GA13856]
Length = 343
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 68 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTT----SLLLIGPKGSGKSS 118
IGS K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 83 IGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATAHAGQKVAIVGPTGTGKTT 142
Query: 119 LVNRISKVFENDK 131
+VN + K +E DK
Sbjct: 143 IVNLLMKFYEIDK 155
>gi|405760178|ref|YP_006700774.1| ABC transporter ATP-binding/permease (pseudogene) [Streptococcus
pneumoniae SPNA45]
gi|404277067|emb|CCM07565.1| putative ABC transporter, ATP-binding/permease protein (pseudogene)
[Streptococcus pneumoniae SPNA45]
Length = 343
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 68 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTT----SLLLIGPKGSGKSS 118
IGS K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 83 IGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATAHAGQKVAIVGPTGAGKTT 142
Query: 119 LVNRISKVFENDK 131
+VN + K +E DK
Sbjct: 143 IVNLLMKFYEIDK 155
>gi|325276037|ref|ZP_08141852.1| PrkA family serine protein kinase [Pseudomonas sp. TJI-51]
gi|324098822|gb|EGB96853.1| PrkA family serine protein kinase [Pseudomonas sp. TJI-51]
Length = 640
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 56/123 (45%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +E+
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLMERVPFYAIKGSPVFESPLGLFNATEDGAILEEEF 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IPR R+ ++ + L+ + G + S + V +++ +A+ K+ G
Sbjct: 162 GIPR--RYLNTIMSPWATKRLQ--------EFGGDISKFKVVKLYPSILNQIAIAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|148998455|ref|ZP_01825896.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
SP11-BS70]
gi|419471808|ref|ZP_14011666.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA07914]
gi|419504650|ref|ZP_14044316.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA47760]
gi|421239249|ref|ZP_15695812.1| ABC transporter family protein [Streptococcus pneumoniae 2071247]
gi|421245808|ref|ZP_15702305.1| ABC transporter family protein [Streptococcus pneumoniae 2081685]
gi|421314784|ref|ZP_15765370.1| ABC transporter family protein [Streptococcus pneumoniae GA47562]
gi|147755648|gb|EDK62694.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
SP11-BS70]
gi|379544053|gb|EHZ09199.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA07914]
gi|379604752|gb|EHZ69507.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA47760]
gi|395600017|gb|EJG60176.1| ABC transporter family protein [Streptococcus pneumoniae 2071247]
gi|395606843|gb|EJG66944.1| ABC transporter family protein [Streptococcus pneumoniae 2081685]
gi|395912412|gb|EJH23271.1| ABC transporter family protein [Streptococcus pneumoniae GA47562]
Length = 343
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 68 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTT----SLLLIGPKGSGKSS 118
IGS K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 83 IGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATVHAGQKVAIVGPTGTGKTT 142
Query: 119 LVNRISKVFENDK 131
+VN + K +E DK
Sbjct: 143 IVNLLMKFYEIDK 155
>gi|410477270|ref|YP_006744029.1| ABC transporter ATP-binding protein [Streptococcus pneumoniae
gamPNI0373]
gi|444387557|ref|ZP_21185577.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PCS125219]
gi|444390902|ref|ZP_21188815.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PCS70012]
gi|444393532|ref|ZP_21191176.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PCS81218]
gi|444395723|ref|ZP_21193264.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PNI0002]
gi|444398630|ref|ZP_21196110.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PNI0006]
gi|444400718|ref|ZP_21198095.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PNI0007]
gi|444402399|ref|ZP_21199566.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PNI0008]
gi|444406177|ref|ZP_21202968.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PNI0009]
gi|444406765|ref|ZP_21203435.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PNI0010]
gi|444415993|ref|ZP_21212205.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PNI0199]
gi|444417835|ref|ZP_21213840.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PNI0360]
gi|444419380|ref|ZP_21215250.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PNI0427]
gi|406370215|gb|AFS43905.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
gamPNI0373]
gi|444252770|gb|ELU59231.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PCS125219]
gi|444255060|gb|ELU61416.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PCS70012]
gi|444257364|gb|ELU63701.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PNI0002]
gi|444258707|gb|ELU65028.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PNI0006]
gi|444258844|gb|ELU65162.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PCS81218]
gi|444265501|gb|ELU71506.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PNI0007]
gi|444266593|gb|ELU72537.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PNI0008]
gi|444269835|gb|ELU75633.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PNI0009]
gi|444272112|gb|ELU77850.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PNI0010]
gi|444278497|gb|ELU83942.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PNI0199]
gi|444282489|gb|ELU87747.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PNI0360]
gi|444286997|gb|ELU91943.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PNI0427]
Length = 343
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 68 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTT----SLLLIGPKGSGKSS 118
IGS K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 83 IGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATAHAGQKVAIVGPTGTGKTT 142
Query: 119 LVNRISKVFENDK 131
+VN + K +E DK
Sbjct: 143 IVNLLMKFYEIDK 155
>gi|448432392|ref|ZP_21585528.1| ABC transporter [Halorubrum tebenquichense DSM 14210]
gi|445687276|gb|ELZ39568.1| ABC transporter [Halorubrum tebenquichense DSM 14210]
Length = 260
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Query: 91 GGMTLSD---YDVPKTTSLLLIGPKGSGKSSLVNRISKVFEND 130
GG+T +D +DV + T LIGP G+GKS++ N IS +E D
Sbjct: 21 GGLTATDHATFDVERGTITGLIGPNGAGKSTIFNLISGFYEPD 63
>gi|307068538|ref|YP_003877504.1| multidrug ABC transporter ATPase and permease [Streptococcus
pneumoniae AP200]
gi|306410075|gb|ADM85502.1| ABC-type multidrug transport system, ATPase and permease component
[Streptococcus pneumoniae AP200]
Length = 338
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 68 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTT----SLLLIGPKGSGKSS 118
IGS K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 78 IGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATVHAGQKVAIVGPTGTGKTT 137
Query: 119 LVNRISKVFENDK 131
+VN + K +E DK
Sbjct: 138 IVNLLMKFYEIDK 150
>gi|148990129|ref|ZP_01821369.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
SP6-BS73]
gi|147924523|gb|EDK75611.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
SP6-BS73]
Length = 284
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 68 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTT----SLLLIGPKGSGKSS 118
IGS K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 83 IGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATAHAGQKVAIVGPTGAGKTT 142
Query: 119 LVNRISKVFENDK 131
+VN + K +E DK
Sbjct: 143 IVNLLMKFYEIDK 155
>gi|448538269|ref|ZP_21622775.1| ABC transporter [Halorubrum hochstenium ATCC 700873]
gi|445701351|gb|ELZ53333.1| ABC transporter [Halorubrum hochstenium ATCC 700873]
Length = 262
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Query: 91 GGMTLSD---YDVPKTTSLLLIGPKGSGKSSLVNRISKVFEND 130
GG+T +D +DV + T LIGP G+GKS++ N IS +E D
Sbjct: 23 GGLTATDHATFDVERGTITGLIGPNGAGKSTIFNLISGFYEPD 65
>gi|320107371|ref|YP_004182961.1| ABC transporter-like protein [Terriglobus saanensis SP1PR4]
gi|319925892|gb|ADV82967.1| ABC transporter related protein [Terriglobus saanensis SP1PR4]
Length = 582
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 97 DYDVPKTTSLLLIGPKGSGKSSLVNRISKVFEND 130
D +P TSL ++GP GSGKS+LVN + ++ + +
Sbjct: 357 DLTIPAGTSLAIVGPTGSGKSTLVNLVPRLLDAE 390
>gi|148985500|ref|ZP_01818689.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
SP3-BS71]
gi|148993209|ref|ZP_01822775.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
SP9-BS68]
gi|194397740|ref|YP_002038512.1| ABC transporter ATP-binding protein [Streptococcus pneumoniae G54]
gi|225859684|ref|YP_002741194.1| ABC transporter transmembrane region [Streptococcus pneumoniae
70585]
gi|237650948|ref|ZP_04525200.1| ABC transporter, transmembrane region [Streptococcus pneumoniae
CCRI 1974]
gi|237820797|ref|ZP_04596642.1| ABC transporter, transmembrane region [Streptococcus pneumoniae
CCRI 1974M2]
gi|307128119|ref|YP_003880150.1| multidrug resistance protein 3 [Streptococcus pneumoniae 670-6B]
gi|387758106|ref|YP_006065085.1| ABC transporter ATP-binding protein/permease [Streptococcus
pneumoniae OXC141]
gi|417679885|ref|ZP_12329280.1| ABC transporter family protein [Streptococcus pneumoniae GA17570]
gi|418077144|ref|ZP_12714375.1| ABC transporter family protein [Streptococcus pneumoniae GA47502]
gi|418087606|ref|ZP_12724773.1| ABC transporter family protein [Streptococcus pneumoniae GA47033]
gi|418126562|ref|ZP_12763466.1| ABC transporter family protein [Streptococcus pneumoniae GA44511]
gi|418133360|ref|ZP_12770229.1| ABC transporter family protein [Streptococcus pneumoniae GA11304]
gi|418145098|ref|ZP_12781890.1| ABC transporter family protein [Streptococcus pneumoniae GA13494]
gi|418167558|ref|ZP_12804210.1| ABC transporter family protein [Streptococcus pneumoniae GA17971]
gi|418192353|ref|ZP_12828854.1| ABC transporter family protein [Streptococcus pneumoniae GA47388]
gi|418203146|ref|ZP_12839572.1| ABC transporter family protein [Streptococcus pneumoniae GA52306]
gi|418215106|ref|ZP_12841839.1| ABC transporter family protein [Streptococcus pneumoniae GA54644]
gi|418232909|ref|ZP_12859494.1| ABC transporter family protein [Streptococcus pneumoniae GA07228]
gi|418235110|ref|ZP_12861685.1| ABC transporter family protein [Streptococcus pneumoniae GA08780]
gi|418237364|ref|ZP_12863929.1| ABC transporter family protein [Streptococcus pneumoniae GA19690]
gi|419454423|ref|ZP_13994386.1| istB-like ATP binding family protein [Streptococcus pneumoniae
EU-NP04]
gi|419458484|ref|ZP_13998425.1| istB-like ATP binding family protein [Streptococcus pneumoniae
GA02254]
gi|419485130|ref|ZP_14024904.1| istB-like ATP binding family protein [Streptococcus pneumoniae
GA43257]
gi|419491831|ref|ZP_14031565.1| istB-like ATP binding family protein [Streptococcus pneumoniae
GA47179]
gi|419509006|ref|ZP_14048656.1| istB-like ATP binding family protein [Streptococcus pneumoniae
GA49542]
gi|419533105|ref|ZP_14072619.1| istB-like ATP binding family protein [Streptococcus pneumoniae
GA47794]
gi|421220994|ref|ZP_15677830.1| ABC transporter family protein [Streptococcus pneumoniae 2070425]
gi|421223243|ref|ZP_15680024.1| ABC transporter family protein [Streptococcus pneumoniae 2070531]
gi|421228209|ref|ZP_15684906.1| ABC transporter family protein [Streptococcus pneumoniae 2072047]
gi|421241370|ref|ZP_15697914.1| ABC transporter family protein [Streptococcus pneumoniae 2080913]
gi|421275617|ref|ZP_15726445.1| istB-like ATP binding family protein [Streptococcus pneumoniae
GA52612]
gi|421279686|ref|ZP_15730491.1| istB-like ATP binding family protein [Streptococcus pneumoniae
GA17301]
gi|421286221|ref|ZP_15736995.1| ABC transporter family protein [Streptococcus pneumoniae GA60190]
gi|421294950|ref|ZP_15745670.1| ABC transporter family protein [Streptococcus pneumoniae GA56113]
gi|421301755|ref|ZP_15752424.1| ABC transporter family protein [Streptococcus pneumoniae GA19998]
gi|147922220|gb|EDK73341.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
SP3-BS71]
gi|147928183|gb|EDK79201.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
SP9-BS68]
gi|194357407|gb|ACF55855.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae G54]
gi|225722041|gb|ACO17895.1| ABC transporter, transmembrane region [Streptococcus pneumoniae
70585]
gi|301800695|emb|CBW33341.1| putative ABC transporter, ATP-binding/permease protein
[Streptococcus pneumoniae OXC141]
gi|306485181|gb|ADM92050.1| multidrug resistance protein 3 [Streptococcus pneumoniae 670-6B]
gi|332072005|gb|EGI82492.1| ABC transporter family protein [Streptococcus pneumoniae GA17570]
gi|353746090|gb|EHD26753.1| ABC transporter family protein [Streptococcus pneumoniae GA47502]
gi|353757007|gb|EHD37604.1| ABC transporter family protein [Streptococcus pneumoniae GA47033]
gi|353795171|gb|EHD75522.1| ABC transporter family protein [Streptococcus pneumoniae GA44511]
gi|353804301|gb|EHD84584.1| ABC transporter family protein [Streptococcus pneumoniae GA11304]
gi|353804813|gb|EHD85092.1| ABC transporter family protein [Streptococcus pneumoniae GA13494]
gi|353828060|gb|EHE08204.1| ABC transporter family protein [Streptococcus pneumoniae GA17971]
gi|353854675|gb|EHE34647.1| ABC transporter family protein [Streptococcus pneumoniae GA47388]
gi|353866150|gb|EHE46053.1| ABC transporter family protein [Streptococcus pneumoniae GA52306]
gi|353868671|gb|EHE48556.1| ABC transporter family protein [Streptococcus pneumoniae GA54644]
gi|353885592|gb|EHE65380.1| ABC transporter family protein [Streptococcus pneumoniae GA07228]
gi|353885826|gb|EHE65611.1| ABC transporter family protein [Streptococcus pneumoniae GA08780]
gi|353891059|gb|EHE70817.1| ABC transporter family protein [Streptococcus pneumoniae GA19690]
gi|379529367|gb|EHY94614.1| istB-like ATP binding family protein [Streptococcus pneumoniae
GA02254]
gi|379581050|gb|EHZ45938.1| istB-like ATP binding family protein [Streptococcus pneumoniae
GA43257]
gi|379591363|gb|EHZ56188.1| istB-like ATP binding family protein [Streptococcus pneumoniae
GA47179]
gi|379604849|gb|EHZ69603.1| istB-like ATP binding family protein [Streptococcus pneumoniae
GA47794]
gi|379610214|gb|EHZ74946.1| istB-like ATP binding family protein [Streptococcus pneumoniae
GA49542]
gi|379630864|gb|EHZ95444.1| istB-like ATP binding family protein [Streptococcus pneumoniae
EU-NP04]
gi|395586238|gb|EJG46614.1| ABC transporter family protein [Streptococcus pneumoniae 2070425]
gi|395586528|gb|EJG46896.1| ABC transporter family protein [Streptococcus pneumoniae 2070531]
gi|395592930|gb|EJG53184.1| ABC transporter family protein [Streptococcus pneumoniae 2072047]
gi|395606648|gb|EJG66751.1| ABC transporter family protein [Streptococcus pneumoniae 2080913]
gi|395872792|gb|EJG83888.1| istB-like ATP binding family protein [Streptococcus pneumoniae
GA52612]
gi|395878422|gb|EJG89487.1| istB-like ATP binding family protein [Streptococcus pneumoniae
GA17301]
gi|395885056|gb|EJG96084.1| ABC transporter family protein [Streptococcus pneumoniae GA60190]
gi|395892143|gb|EJH03135.1| ABC transporter family protein [Streptococcus pneumoniae GA56113]
gi|395897890|gb|EJH08843.1| ABC transporter family protein [Streptococcus pneumoniae GA19998]
gi|429320078|emb|CCP33405.1| putative ABC transporter, ATP-binding/permease protein
[Streptococcus pneumoniae SPN034183]
gi|429321896|emb|CCP35379.1| putative ABC transporter, ATP-binding/permease protein
[Streptococcus pneumoniae SPN994039]
gi|429323716|emb|CCP31420.1| putative ABC transporter, ATP-binding/permease protein
[Streptococcus pneumoniae SPN994038]
Length = 343
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 68 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTT----SLLLIGPKGSGKSS 118
IGS K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 83 IGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATAHAGQKVAIVGPTGTGKTT 142
Query: 119 LVNRISKVFENDK 131
+VN + K +E DK
Sbjct: 143 IVNLLMKFYEIDK 155
>gi|418121967|ref|ZP_12758909.1| ABC transporter family protein [Streptococcus pneumoniae GA44194]
gi|353791442|gb|EHD71818.1| ABC transporter family protein [Streptococcus pneumoniae GA44194]
Length = 343
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 68 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTTS----LLLIGPKGSGKSS 118
IGS K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 83 IGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATAHAGQKVAIVGPTGTGKTT 142
Query: 119 LVNRISKVFENDK 131
+VN + K +E DK
Sbjct: 143 IVNLLMKFYEIDK 155
>gi|291617890|ref|YP_003520632.1| FepC [Pantoea ananatis LMG 20103]
gi|291152920|gb|ADD77504.1| FepC [Pantoea ananatis LMG 20103]
Length = 267
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 75/181 (41%), Gaps = 28/181 (15%)
Query: 74 AKNKILSYTPGAWIENVGGMTLSD--YDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDK 131
A IL GA + GG L+D + + L +IGP GSGK+SL+ IS+ +
Sbjct: 9 ASESILRVNIGALHKPDGGCLLNDITFGIGTGERLAIIGPNGSGKTSLLRAISR-----E 63
Query: 132 FASERAQVTYNSSVGDGTYFLQEYTIPRGVRHGELVIRRSDSSSLR---------NRMRC 182
A ++ ++T N TY QE V+ ++D LR R+
Sbjct: 64 LAVQKDEITLNGRCIK-TYTRQELATCIA------VMAQNDVPDLRLSVEDYVGLGRL-- 114
Query: 183 KAHKIGCEPSVIRKVNFVIFVVDGLAVL--KSMEGDSDVEKQYNQIVATTFNCPYLSFRD 240
H C SV ++V + GLA L +S++ S E+Q + P L D
Sbjct: 115 -PHLRACPHSVNQRVVSEVLEETGLAALRRRSLDALSGGERQRAALARVLAQKPQLILLD 173
Query: 241 D 241
+
Sbjct: 174 E 174
>gi|449106244|ref|ZP_21742912.1| hypothetical protein HMPREF9729_01177 [Treponema denticola ASLM]
gi|451967956|ref|ZP_21921185.1| hypothetical protein HMPREF9728_00356 [Treponema denticola US-Trep]
gi|448965439|gb|EMB46102.1| hypothetical protein HMPREF9729_01177 [Treponema denticola ASLM]
gi|451703334|gb|EMD57709.1| hypothetical protein HMPREF9728_00356 [Treponema denticola US-Trep]
Length = 588
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 97 DYDVPKTTSLLLIGPKGSGKSSLVNRISKVFEND 130
D+ VP+ TS ++GP GSGK++L N I++ ++ D
Sbjct: 360 DFTVPQKTSCAIVGPSGSGKTTLCNLIARFWDVD 393
>gi|67588672|ref|XP_665367.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54656024|gb|EAL35137.1| hypothetical protein Chro.60157, partial [Cryptosporidium hominis]
Length = 316
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDK 131
K TS+LLIGPK SGK++ +I+K F NDK
Sbjct: 28 KITSVLLIGPKNSGKTTFCLKIAKEFLNDK 57
>gi|157819749|ref|NP_001101199.1| interferon-induced protein 44 [Rattus norvegicus]
gi|149026232|gb|EDL82475.1| interferon-induced protein 44, isoform CRA_a [Rattus norvegicus]
gi|149026233|gb|EDL82476.1| interferon-induced protein 44, isoform CRA_a [Rattus norvegicus]
Length = 422
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 52/123 (42%), Gaps = 38/123 (30%)
Query: 27 IPLLSGD---DEGSRDSWDSLVDQRRRDAVFREVLQSYDQLRTRIGSLTDAKNKILSYTP 83
+P LSGD E D L+D+R+ + +G ++ + + +Y P
Sbjct: 129 LPSLSGDTFIQECEAFRCDELLDERKTRGI--------------VGLCSNLLDALRNYKP 174
Query: 84 GAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNS 143
D+ T +LL+GP G+GKSS VN + VF + +T+ +
Sbjct: 175 YG-------------DLVHQTRILLLGPIGAGKSSFVNSVKSVF--------KGSITHQA 213
Query: 144 SVG 146
SVG
Sbjct: 214 SVG 216
>gi|422591075|ref|ZP_16665724.1| PrkA family serine protein kinase [Pseudomonas syringae pv.
morsprunorum str. M302280]
gi|330878400|gb|EGH12549.1| PrkA family serine protein kinase [Pseudomonas syringae pv.
morsprunorum str. M302280]
Length = 640
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IP RR S+ + + + G + S + V V++ +AV K+ G
Sbjct: 162 GIP----------RRYLSTIMSPWATKRLAEFGGDISQFKVVKLYPSVLNQIAVAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|158523236|ref|YP_001531106.1| ABC transporter-like protein [Desulfococcus oleovorans Hxd3]
gi|158512062|gb|ABW69029.1| ABC transporter-related protein [Desulfococcus oleovorans Hxd3]
Length = 579
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 8/64 (12%)
Query: 69 GSLTDAKNKILSYTPGAWIENVGGMTLSD--YDVPKTTSLLLIGPKGSGKSSLVNRISKV 126
G +N SY PG G LSD D+P L ++GP GSGK++LV+ ++++
Sbjct: 332 GGALSFRNVSFSYAPG------GKPVLSDIHLDLPAGKILCIVGPPGSGKTTLVHLMARL 385
Query: 127 FEND 130
++ D
Sbjct: 386 YDPD 389
>gi|415700527|ref|ZP_11458113.1| ABC transporter family protein [Streptococcus pneumoniae 459-5]
gi|415750212|ref|ZP_11478126.1| ABC transporter family protein [Streptococcus pneumoniae SV35]
gi|415753127|ref|ZP_11480109.1| ABC transporter family protein [Streptococcus pneumoniae SV36]
gi|418124278|ref|ZP_12761207.1| ABC transporter family protein [Streptococcus pneumoniae GA44378]
gi|418128814|ref|ZP_12765705.1| ABC transporter family protein [Streptococcus pneumoniae NP170]
gi|418138023|ref|ZP_12774859.1| ABC transporter family protein [Streptococcus pneumoniae GA11663]
gi|418179049|ref|ZP_12815629.1| ABC transporter family protein [Streptococcus pneumoniae GA41565]
gi|419473996|ref|ZP_14013843.1| ftsK/SpoIIIE family protein [Streptococcus pneumoniae GA13430]
gi|421269132|ref|ZP_15719998.1| ftsK/SpoIIIE family protein [Streptococcus pneumoniae SPAR95]
gi|353794612|gb|EHD74965.1| ABC transporter family protein [Streptococcus pneumoniae GA44378]
gi|353797688|gb|EHD78020.1| ABC transporter family protein [Streptococcus pneumoniae NP170]
gi|353841363|gb|EHE21419.1| ABC transporter family protein [Streptococcus pneumoniae GA41565]
gi|353900015|gb|EHE75576.1| ABC transporter family protein [Streptococcus pneumoniae GA11663]
gi|379549624|gb|EHZ14728.1| ftsK/SpoIIIE family protein [Streptococcus pneumoniae GA13430]
gi|381308774|gb|EIC49617.1| ABC transporter family protein [Streptococcus pneumoniae SV36]
gi|381314060|gb|EIC54836.1| ABC transporter family protein [Streptococcus pneumoniae 459-5]
gi|381316758|gb|EIC57502.1| ABC transporter family protein [Streptococcus pneumoniae SV35]
gi|395866997|gb|EJG78122.1| ftsK/SpoIIIE family protein [Streptococcus pneumoniae SPAR95]
Length = 284
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 68 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTT----SLLLIGPKGSGKSS 118
IGS K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 83 IGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATAHAGQKVAIVGPTGAGKTT 142
Query: 119 LVNRISKVFENDK 131
+VN + K +E DK
Sbjct: 143 IVNLLMKFYEIDK 155
>gi|403511307|ref|YP_006642945.1| ABC transporter family protein [Nocardiopsis alba ATCC BAA-2165]
gi|402800290|gb|AFR07700.1| ABC transporter family protein [Nocardiopsis alba ATCC BAA-2165]
Length = 286
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 13/97 (13%)
Query: 31 SGDDEGSRDSWDSLVDQRRRDAVFREVLQSYDQLRTRIGSLTD----AKNKILSYTPGAW 86
SG +E ++ ++ Q R+ E+L+ + +G D A++ + Y PG
Sbjct: 10 SGPEEVPVEAAEASAVQEHRE----ELLEQAEAAAVEVGGPEDHLLLARDMVAGYVPGVN 65
Query: 87 IENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRI 123
I N +TL++ +V + +IGP G+GKS+L+ I
Sbjct: 66 ILNGCTLTLTEGEV-----VAIIGPNGAGKSTLIKTI 97
>gi|213967679|ref|ZP_03395826.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
gi|301382739|ref|ZP_07231157.1| putative serine protein kinase, PrkA [Pseudomonas syringae pv.
tomato Max13]
gi|302063466|ref|ZP_07255007.1| putative serine protein kinase, PrkA [Pseudomonas syringae pv.
tomato K40]
gi|302130718|ref|ZP_07256708.1| putative serine protein kinase, PrkA [Pseudomonas syringae pv.
tomato NCPPB 1108]
gi|422296563|ref|ZP_16384230.1| hypothetical protein Pav631_0511 [Pseudomonas avellanae BPIC 631]
gi|422659012|ref|ZP_16721442.1| PrkA family serine protein kinase [Pseudomonas syringae pv.
lachrymans str. M302278]
gi|213927455|gb|EEB61003.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
gi|331017635|gb|EGH97691.1| PrkA family serine protein kinase [Pseudomonas syringae pv.
lachrymans str. M302278]
gi|407992247|gb|EKG33920.1| hypothetical protein Pav631_0511 [Pseudomonas avellanae BPIC 631]
Length = 640
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNASEDGAILEEDF 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IP RR S+ + + + G + S + V V++ +AV K+ G
Sbjct: 162 GIP----------RRYLSTIMSPWATKRLAEFGGDISQFKVVKLYPSVLNQIAVAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|83644329|ref|YP_432764.1| putative Ser protein kinase [Hahella chejuensis KCTC 2396]
gi|83632372|gb|ABC28339.1| putative Ser protein kinase [Hahella chejuensis KCTC 2396]
Length = 640
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ +F+ F + + + S +G DG +EY
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKSLFQKQPFFAIKDSPVFESPLGLFDPAEDGKILEEEY 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IP R+ ++ L H+ + S + V +++ +AV K+ G
Sbjct: 162 GIPN--RYLRFIMSPWAVKRL--------HEFNGDISKFKVVKLYPSILNQVAVSKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|421308128|ref|ZP_15758768.1| ABC transporter family protein [Streptococcus pneumoniae GA60132]
gi|395906302|gb|EJH17201.1| ABC transporter family protein [Streptococcus pneumoniae GA60132]
Length = 284
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 68 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTT----SLLLIGPKGSGKSS 118
IGS K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 83 IGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATAHAGQKVAIVGPTGTGKTT 142
Query: 119 LVNRISKVFENDK 131
+VN + K +E DK
Sbjct: 143 IVNLLMKFYEIDK 155
>gi|348669737|gb|EGZ09559.1| hypothetical protein PHYSODRAFT_522438 [Phytophthora sojae]
Length = 845
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 101 PKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSS 144
P T +L+L G GSGKSS + +S F NDK + QVTYN +
Sbjct: 107 PGTITLVL-GQPGSGKSSFMKLLSGRFPNDKNVTMEGQVTYNGT 149
>gi|448747388|ref|ZP_21729048.1| Serine-protein kinase, PrkA [Halomonas titanicae BH1]
gi|445565080|gb|ELY21193.1| Serine-protein kinase, PrkA [Halomonas titanicae BH1]
Length = 640
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 106 LLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEYTIPR 159
L L+GP G GKSSL R+ + E F + + Y S +G DG +EY IP+
Sbjct: 106 LYLLGPVGGGKSSLAERLKLLMERIPFYAIKGSPVYESPLGLFSPEEDGELLEKEYGIPQ 165
>gi|28867775|ref|NP_790394.1| hypothetical protein PSPTO_0547 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|28851010|gb|AAO54089.1| conserved protein of unknown function [Pseudomonas syringae pv.
tomato str. DC3000]
Length = 640
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNASEDGAILEEDF 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IP RR S+ + + + G + S + V V++ +AV K+ G
Sbjct: 162 GIP----------RRYLSTIMSPWATKRLAEFGGDISQFKVVKLYPSVLNQIAVAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|352105148|ref|ZP_08960704.1| PrkA family serine protein kinase [Halomonas sp. HAL1]
gi|350598528|gb|EHA14643.1| PrkA family serine protein kinase [Halomonas sp. HAL1]
Length = 640
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 106 LLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEYTIPR 159
L L+GP G GKSSL R+ + E F + + Y S +G DG +EY IP+
Sbjct: 106 LYLLGPVGGGKSSLAERLKLLMERIPFYAIKGSPVYESPLGLFSPEEDGELLEKEYGIPQ 165
>gi|67465083|ref|XP_648726.1| AIG1 family protein [Entamoeba histolytica HM-1:IMSS]
gi|56464975|gb|EAL43340.1| AIG1 family protein [Entamoeba histolytica HM-1:IMSS]
Length = 290
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Query: 93 MTLSDYDVPKTTSLLLIGPKGSGKSSLVNRI--SKVFE-NDKFASERAQVTYNSSVGD 147
M++S+ D PK T LLIG G+GKSSLVN I VFE +D S+ + S GD
Sbjct: 1 MSVSE-DKPKQTKFLLIGETGNGKSSLVNFILQKNVFEVSDDTKSQTKEAIVKSGEGD 57
>gi|359395727|ref|ZP_09188779.1| hypothetical protein KUC_2395 [Halomonas boliviensis LC1]
gi|357969992|gb|EHJ92439.1| hypothetical protein KUC_2395 [Halomonas boliviensis LC1]
Length = 640
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 106 LLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEYTIPR 159
L L+GP G GKSSL R+ + E F + + Y S +G DG +EY IP+
Sbjct: 106 LYLLGPVGGGKSSLAERLKLLMERIPFYAIKGSPVYESPLGLFSPEEDGELLEKEYGIPQ 165
>gi|417699298|ref|ZP_12348468.1| ABC transporter family protein [Streptococcus pneumoniae GA41317]
gi|419454074|ref|ZP_13994043.1| AAA domain family protein [Streptococcus pneumoniae EU-NP03]
gi|419506791|ref|ZP_14046451.1| AAA domain family protein [Streptococcus pneumoniae GA49194]
gi|332199239|gb|EGJ13317.1| ABC transporter family protein [Streptococcus pneumoniae GA41317]
gi|379604955|gb|EHZ69708.1| AAA domain family protein [Streptococcus pneumoniae GA49194]
gi|379624751|gb|EHZ89381.1| AAA domain family protein [Streptococcus pneumoniae EU-NP03]
Length = 264
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 68 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTT----SLLLIGPKGSGKSS 118
IGS K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 4 IGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATAHAGQKVAIVGPTGTGKTT 63
Query: 119 LVNRISKVFENDK 131
+VN + K +E DK
Sbjct: 64 IVNLLMKFYEIDK 76
>gi|410093041|ref|ZP_11289541.1| PrkA family serine protein kinase [Pseudomonas viridiflava
UASWS0038]
gi|409759574|gb|EKN44785.1| PrkA family serine protein kinase [Pseudomonas viridiflava
UASWS0038]
Length = 640
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNANEDGAILEEDF 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IP RR S+ + + + G + S + V V++ +AV K+ G
Sbjct: 162 GIP----------RRYLSTIMSPWATKRLAEFGGDISQFKVVKLYPSVLNQIAVAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|348669738|gb|EGZ09560.1| hypothetical protein PHYSODRAFT_338333 [Phytophthora sojae]
Length = 593
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 101 PKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSS 144
P T +L+L G GSGKSS + +S F NDK + QVTYN +
Sbjct: 107 PGTITLVL-GQPGSGKSSFMKLLSGRFPNDKNVTMEGQVTYNGT 149
>gi|291398641|ref|XP_002715591.1| PREDICTED: interferon-induced protein 44-like [Oryctolagus
cuniculus]
Length = 447
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 51/121 (42%), Gaps = 30/121 (24%)
Query: 67 RIGSLTDAKNKILS----YTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNR 122
RI +T +NK+LS Y P A D+ +LL+GP GSGKSS N
Sbjct: 164 RITEVTQYRNKLLSDLRAYKPYA-------------DLVSEIRILLLGPTGSGKSSFFNS 210
Query: 123 ISKVFENDKFASERAQVTYNSSVG-DGTYFLQE----YTIPRGVRHGELVIRRSDSSSLR 177
+ VF R + T + VG D T + E Y+I GV L D+ L
Sbjct: 211 VKSVF--------RGRPTQQAIVGSDSTTSITEQYRIYSIKDGVHRQYLPFMLCDTMGLH 262
Query: 178 N 178
+
Sbjct: 263 D 263
>gi|119871829|ref|YP_929836.1| ABC transporter [Pyrobaculum islandicum DSM 4184]
gi|119673237|gb|ABL87493.1| amino acid/amide ABC transporter ATP-binding protein 1, HAAT family
[Pyrobaculum islandicum DSM 4184]
Length = 246
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 87 IENVGGMTLSD---YDVPKTTSLLLIGPKGSGKSSLVNRISKVFEND--KFASERAQVTY 141
++ GG+T D VP + ++L GP GSGK++L+N IS +++ D K E +TY
Sbjct: 13 VKKFGGLTALDGATIAVPLNSFVILAGPNGSGKTTLLNVISGIYQPDRGKVIFEGRDITY 72
Query: 142 N 142
Sbjct: 73 T 73
>gi|225861712|ref|YP_002743221.1| multidrug resistance protein 3 (P-glycoprotein C) [Streptococcus
pneumoniae Taiwan19F-14]
gi|298229673|ref|ZP_06963354.1| multidrug resistance protein 3 (P-glycoprotein C) [Streptococcus
pneumoniae str. Canada MDR_19F]
gi|298255185|ref|ZP_06978771.1| multidrug resistance protein 3 (P-glycoprotein C) [Streptococcus
pneumoniae str. Canada MDR_19A]
gi|298503656|ref|YP_003725596.1| sugar ABC transporter ATP-binding protein [Streptococcus pneumoniae
TCH8431/19A]
gi|387788942|ref|YP_006254010.1| multidrug resistance protein 3 (P-glycoprotein C) [Streptococcus
pneumoniae ST556]
gi|417313377|ref|ZP_12100088.1| ABC transporter family protein [Streptococcus pneumoniae GA04375]
gi|418083712|ref|ZP_12720907.1| ABC transporter family protein [Streptococcus pneumoniae GA44288]
gi|418085894|ref|ZP_12723072.1| ABC transporter family protein [Streptococcus pneumoniae GA47281]
gi|418094697|ref|ZP_12731823.1| ABC transporter family protein [Streptococcus pneumoniae GA49138]
gi|418101366|ref|ZP_12738447.1| ABC transporter family protein [Streptococcus pneumoniae 7286-06]
gi|418119364|ref|ZP_12756319.1| ABC transporter family protein [Streptococcus pneumoniae GA18523]
gi|418142424|ref|ZP_12779235.1| ABC transporter family protein [Streptococcus pneumoniae GA13455]
gi|418151410|ref|ZP_12788155.1| ABC transporter family protein [Streptococcus pneumoniae GA14798]
gi|418153656|ref|ZP_12790393.1| ABC transporter family protein [Streptococcus pneumoniae GA16121]
gi|418158226|ref|ZP_12794940.1| ABC transporter family protein [Streptococcus pneumoniae GA16833]
gi|418165204|ref|ZP_12801870.1| ABC transporter family protein [Streptococcus pneumoniae GA17371]
gi|418172045|ref|ZP_12808666.1| ABC transporter family protein [Streptococcus pneumoniae GA19451]
gi|418196558|ref|ZP_12833033.1| ABC transporter family protein [Streptococcus pneumoniae GA47688]
gi|418198741|ref|ZP_12835197.1| ABC transporter family protein [Streptococcus pneumoniae GA47778]
gi|418224099|ref|ZP_12850738.1| ABC transporter family protein [Streptococcus pneumoniae 5185-06]
gi|418228409|ref|ZP_12855025.1| ABC transporter family protein [Streptococcus pneumoniae 3063-00]
gi|419425843|ref|ZP_13966037.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
7533-05]
gi|419427956|ref|ZP_13968136.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
5652-06]
gi|419430132|ref|ZP_13970294.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA11856]
gi|419436699|ref|ZP_13976784.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
8190-05]
gi|419438943|ref|ZP_13979010.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA13499]
gi|419447563|ref|ZP_13987567.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
7879-04]
gi|419449687|ref|ZP_13989682.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
4075-00]
gi|419451818|ref|ZP_13991802.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
EU-NP02]
gi|419502555|ref|ZP_14042236.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA47628]
gi|419519616|ref|ZP_14059221.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA08825]
gi|419528861|ref|ZP_14068401.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA17719]
gi|421288305|ref|ZP_15739066.1| ABC transporter family protein [Streptococcus pneumoniae GA58771]
gi|225727629|gb|ACO23480.1| multidrug resistance protein 3 (P-glycoprotein C) [Streptococcus
pneumoniae Taiwan19F-14]
gi|298239251|gb|ADI70382.1| possible sugar ABC superfamily ATP binding cassette transporter,
ABC protein [Streptococcus pneumoniae TCH8431/19A]
gi|327389082|gb|EGE87428.1| ABC transporter family protein [Streptococcus pneumoniae GA04375]
gi|353753967|gb|EHD34582.1| ABC transporter family protein [Streptococcus pneumoniae GA44288]
gi|353755369|gb|EHD35973.1| ABC transporter family protein [Streptococcus pneumoniae GA47281]
gi|353763666|gb|EHD44217.1| ABC transporter family protein [Streptococcus pneumoniae GA49138]
gi|353769427|gb|EHD49944.1| ABC transporter family protein [Streptococcus pneumoniae 7286-06]
gi|353790017|gb|EHD70403.1| ABC transporter family protein [Streptococcus pneumoniae GA18523]
gi|353804237|gb|EHD84521.1| ABC transporter family protein [Streptococcus pneumoniae GA13455]
gi|353813488|gb|EHD93717.1| ABC transporter family protein [Streptococcus pneumoniae GA14798]
gi|353815995|gb|EHD96206.1| ABC transporter family protein [Streptococcus pneumoniae GA16121]
gi|353821166|gb|EHE01344.1| ABC transporter family protein [Streptococcus pneumoniae GA16833]
gi|353828283|gb|EHE08425.1| ABC transporter family protein [Streptococcus pneumoniae GA17371]
gi|353834668|gb|EHE14767.1| ABC transporter family protein [Streptococcus pneumoniae GA19451]
gi|353859789|gb|EHE39738.1| ABC transporter family protein [Streptococcus pneumoniae GA47688]
gi|353860642|gb|EHE40583.1| ABC transporter family protein [Streptococcus pneumoniae GA47778]
gi|353878176|gb|EHE58011.1| ABC transporter family protein [Streptococcus pneumoniae 5185-06]
gi|353879983|gb|EHE59802.1| ABC transporter family protein [Streptococcus pneumoniae 3063-00]
gi|379138684|gb|AFC95475.1| multidrug resistance protein 3 (P-glycoprotein C) [Streptococcus
pneumoniae ST556]
gi|379536314|gb|EHZ01503.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA13499]
gi|379548969|gb|EHZ14081.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA11856]
gi|379563578|gb|EHZ28581.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA17719]
gi|379598597|gb|EHZ63384.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA47628]
gi|379612303|gb|EHZ77023.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
8190-05]
gi|379612823|gb|EHZ77539.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
7879-04]
gi|379617279|gb|EHZ81971.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
5652-06]
gi|379617557|gb|EHZ82243.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
7533-05]
gi|379621685|gb|EHZ86327.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
4075-00]
gi|379621864|gb|EHZ86503.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
EU-NP02]
gi|379639655|gb|EIA04195.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA08825]
gi|395886038|gb|EJG97058.1| ABC transporter family protein [Streptococcus pneumoniae GA58771]
Length = 343
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 68 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTTS----LLLIGPKGSGKSS 118
IGS K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 83 IGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSVTAHAGQRVAIVGPTGAGKTT 142
Query: 119 LVNRISKVFENDK 131
+VN + K +E DK
Sbjct: 143 IVNLLMKFYEIDK 155
>gi|257790091|ref|YP_003180697.1| ABC transporter-like protein [Eggerthella lenta DSM 2243]
gi|317489535|ref|ZP_07948045.1| ABC transporter [Eggerthella sp. 1_3_56FAA]
gi|325830183|ref|ZP_08163640.1| ABC transporter, ATP-binding protein [Eggerthella sp. HGA1]
gi|257473988|gb|ACV54308.1| ABC transporter related [Eggerthella lenta DSM 2243]
gi|316911464|gb|EFV33063.1| ABC transporter [Eggerthella sp. 1_3_56FAA]
gi|325487650|gb|EGC90088.1| ABC transporter, ATP-binding protein [Eggerthella sp. HGA1]
Length = 581
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 12/95 (12%)
Query: 100 VPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFA-----------SERAQVTYNSSVGDG 148
+P+ TS ++GP GSGK++LVN +++ ++ D A + + + + S V
Sbjct: 359 IPQGTSCAIVGPSGSGKTTLVNLMARFWDVDAGAVLLGGQDVRKGTAESLLAHVSMVFQN 418
Query: 149 TYFLQEYTIPRGVRHGELVIRRSDSSSLRNRMRCK 183
Y + T+ ++ G +D + R RC
Sbjct: 419 VYLFND-TVENNIKFGMPNATHADVEAAARRARCH 452
>gi|397688227|ref|YP_006525546.1| PrkA family serine protein kinase [Pseudomonas stutzeri DSM 10701]
gi|395809783|gb|AFN79188.1| PrkA family serine protein kinase [Pseudomonas stutzeri DSM 10701]
Length = 640
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E F + + + S +G D ++Y
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLMEKVPFYAIKGSPVFESPLGLFNPAEDAQILEEDY 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IP RR +S + + + G + S R V +++ +A+ K+ G
Sbjct: 162 GIP----------RRYLNSIMSPWATKRLQEFGGDISQFRVVKLYPSILNQIAISKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|358450870|ref|ZP_09161308.1| PrkA family serine protein kinase [Marinobacter manganoxydans
MnI7-9]
gi|385332674|ref|YP_005886625.1| serine protein kinase PrkA [Marinobacter adhaerens HP15]
gi|311695824|gb|ADP98697.1| serine protein kinase, PrkA [Marinobacter adhaerens HP15]
gi|357224846|gb|EHJ03373.1| PrkA family serine protein kinase [Marinobacter manganoxydans
MnI7-9]
Length = 640
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 52/127 (40%), Gaps = 24/127 (18%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ + + F + + S +G D +EY
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKSLMQKVPFYAIKGSPVNESPLGLFDPAEDAQILEEEY 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKA----HKIGCEPSVIRKVNFVIFVVDGLAVLK 211
IP + L+N M A H+ G + S R V V+D +AV K
Sbjct: 162 GIP--------------ARYLKNIMSPWAVKRLHEFGGDISQFRVVKMYPSVLDQVAVSK 207
Query: 212 SMEGDSD 218
+ GD +
Sbjct: 208 TEPGDDN 214
>gi|418190156|ref|ZP_12826667.1| ABC transporter family protein [Streptococcus pneumoniae GA47373]
gi|419482942|ref|ZP_14022727.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA40563]
gi|419496097|ref|ZP_14035813.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA47461]
gi|421303596|ref|ZP_15754259.1| ABC transporter family protein [Streptococcus pneumoniae GA17484]
gi|353852986|gb|EHE32970.1| ABC transporter family protein [Streptococcus pneumoniae GA47373]
gi|379578407|gb|EHZ43319.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA40563]
gi|379593117|gb|EHZ57931.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA47461]
gi|395899511|gb|EJH10451.1| ABC transporter family protein [Streptococcus pneumoniae GA17484]
Length = 343
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 68 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTTS----LLLIGPKGSGKSS 118
IGS K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 83 IGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSVTAHAGQRVAIVGPTGAGKTT 142
Query: 119 LVNRISKVFENDK 131
+VN + K +E DK
Sbjct: 143 IVNLLMKFYEIDK 155
>gi|418194469|ref|ZP_12830957.1| ABC transporter family protein [Streptococcus pneumoniae GA47439]
gi|353856980|gb|EHE36945.1| ABC transporter family protein [Streptococcus pneumoniae GA47439]
Length = 343
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 68 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTTS----LLLIGPKGSGKSS 118
IGS K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 83 IGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSVTAHAGQRVAIVGPTGAGKTT 142
Query: 119 LVNRISKVFENDK 131
+VN + K +E DK
Sbjct: 143 IVNLLMKFYEIDK 155
>gi|77461360|ref|YP_350867.1| Serine protein kinase, PrkA [Pseudomonas fluorescens Pf0-1]
gi|77385363|gb|ABA76876.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
Length = 640
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLMEKVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IPR R+ ++ + L + G + S R V +++ +AV K+ G
Sbjct: 162 GIPR--RYLNTIMSPWATKRL--------AEFGGDISQFRVVKLYPSILNQIAVAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|288941920|ref|YP_003444160.1| putative serine protein kinase, PrkA [Allochromatium vinosum DSM
180]
gi|288897292|gb|ADC63128.1| putative serine protein kinase, PrkA [Allochromatium vinosum DSM
180]
Length = 640
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E F + + + S +G DG ++Y
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKELMEERPFYAIQGSPVFESPLGLFSPEEDGAILEEDY 161
Query: 156 TIPR 159
IPR
Sbjct: 162 GIPR 165
>gi|398890185|ref|ZP_10643872.1| putative Ser protein kinase [Pseudomonas sp. GM55]
gi|398188488|gb|EJM75790.1| putative Ser protein kinase [Pseudomonas sp. GM55]
Length = 640
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLMEKVPFYAIKGSPVFESPLGLFNSTEDGAILEEDF 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IPR R+ ++ + L + G + S R V +++ +AV K+ G
Sbjct: 162 GIPR--RYLNTIMSPWATKRL--------AEFGGDISQFRVVKLYPSILNQIAVAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|398959144|ref|ZP_10677960.1| putative Ser protein kinase [Pseudomonas sp. GM33]
gi|426411838|ref|YP_007031937.1| PrkA family serine protein kinase [Pseudomonas sp. UW4]
gi|398145519|gb|EJM34300.1| putative Ser protein kinase [Pseudomonas sp. GM33]
gi|426270055|gb|AFY22132.1| PrkA family serine protein kinase [Pseudomonas sp. UW4]
Length = 640
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLMEKVPFYAIKGSPVFESPLGLFNSTEDGAILEEDF 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IPR R+ ++ + L + G + S R V +++ +AV K+ G
Sbjct: 162 GIPR--RYLNTIMSPWATKRL--------AEFGGDISQFRVVKLYPSILNQIAVAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|389680913|ref|ZP_10172259.1| protein kinase YeaG [Pseudomonas chlororaphis O6]
gi|399007387|ref|ZP_10709897.1| putative Ser protein kinase [Pseudomonas sp. GM17]
gi|425901938|ref|ZP_18878529.1| protein kinase YeaG [Pseudomonas chlororaphis subsp. aureofaciens
30-84]
gi|388555202|gb|EIM18449.1| protein kinase YeaG [Pseudomonas chlororaphis O6]
gi|397892646|gb|EJL09123.1| protein kinase YeaG [Pseudomonas chlororaphis subsp. aureofaciens
30-84]
gi|398120359|gb|EJM10023.1| putative Ser protein kinase [Pseudomonas sp. GM17]
Length = 640
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IPR R+ ++ + L + G + S R V +++ +AV K+ G
Sbjct: 162 GIPR--RYLNTIMSPWATKRL--------SEFGGDISQFRVVKLYPSILNQIAVAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|398908992|ref|ZP_10654326.1| putative Ser protein kinase [Pseudomonas sp. GM49]
gi|398188931|gb|EJM76219.1| putative Ser protein kinase [Pseudomonas sp. GM49]
Length = 640
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLMEKVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IPR R+ ++ + L + G + S R V +++ +AV K+ G
Sbjct: 162 GIPR--RYLNTIMSPWATKRL--------AEFGGDISQFRVVKLYPSILNQIAVAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|224056549|ref|XP_002298905.1| predicted protein [Populus trichocarpa]
gi|222846163|gb|EEE83710.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 60/147 (40%), Gaps = 18/147 (12%)
Query: 3 GEKTTSRFFTPEGEEIISPVDDFDIPLLSGD-DEGSRDSWDSLVDQRRRDAVFREVLQSY 61
G K +RF P G+ ++S D P+ D + D +D R A + L
Sbjct: 104 GRKPLARF--PSGDFVLS-----DCPITLQDLQHATSQVGDFAIDNR---AGISQTLHRI 153
Query: 62 DQLRTRIGSLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVN 121
+R R G + ++ PG+ L D V SLL IGP G GK++++
Sbjct: 154 SAIRNREGQIIGLTCRVGRAIPGS------ASLLRDL-VHDGASLLFIGPPGVGKTTIIR 206
Query: 122 RISKVFENDKFASERAQVTYNSSVGDG 148
I+++ ND T N GDG
Sbjct: 207 EIARMLANDYKKRVMIVDTSNEIGGDG 233
>gi|407368269|ref|ZP_11114801.1| PrkA family serine protein kinase [Pseudomonas mandelii JR-1]
Length = 640
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IPR R+ ++ + L + G + S R V +++ +AV K+ G
Sbjct: 162 GIPR--RYLNTIMSPWATKRL--------AEFGGDISQFRVVKLYPSILNQIAVAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|398873138|ref|ZP_10628403.1| putative Ser protein kinase [Pseudomonas sp. GM74]
gi|398200423|gb|EJM87335.1| putative Ser protein kinase [Pseudomonas sp. GM74]
Length = 640
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLMEKVPFYAIKGSPVFESPLGLFNSTEDGAILEEDF 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IPR R+ ++ + L + G + S R V +++ +AV K+ G
Sbjct: 162 GIPR--RYLNTIMSPWATKRL--------AEFGGDISQFRVVKLYPSILNQIAVAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|398924280|ref|ZP_10661097.1| putative Ser protein kinase [Pseudomonas sp. GM48]
gi|398173611|gb|EJM61441.1| putative Ser protein kinase [Pseudomonas sp. GM48]
Length = 640
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLMEKVPFYAIKGSPVFESPLGLFNSTEDGAILEEDF 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IPR R+ ++ + L + G + S R V +++ +AV K+ G
Sbjct: 162 GIPR--RYLNTIMSPWATKRL--------AEFGGDISQFRVVKLYPSILNQIAVAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|398967701|ref|ZP_10682051.1| putative Ser protein kinase [Pseudomonas sp. GM30]
gi|424925261|ref|ZP_18348622.1| Ser protein kinase [Pseudomonas fluorescens R124]
gi|398144462|gb|EJM33294.1| putative Ser protein kinase [Pseudomonas sp. GM30]
gi|404306421|gb|EJZ60383.1| Ser protein kinase [Pseudomonas fluorescens R124]
Length = 640
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLMEKVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IPR R+ ++ + L + G + S R V +++ +AV K+ G
Sbjct: 162 GIPR--RYLNTIMSPWATKRL--------AEFGGDISQFRVVKLYPSILNQIAVAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|410720856|ref|ZP_11360206.1| MoxR-like ATPase [Methanobacterium sp. Maddingley MBC34]
gi|410600130|gb|EKQ54663.1| MoxR-like ATPase [Methanobacterium sp. Maddingley MBC34]
Length = 287
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 72 TDAKNKIL---SYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFE 128
TD K+L SY P I NV + LS +L+ GP G+GK+ L +++ FE
Sbjct: 8 TDYVEKVLGENSYVPDDTIVNVVFLALS-----LKKPILIEGPPGTGKTELSKAVARAFE 62
Query: 129 NDKFASERAQ-VTYNSSVGDGTY 150
D F + + +T+ VG+ Y
Sbjct: 63 RDFFRVQCYEGITFEQIVGEWNY 85
>gi|398981217|ref|ZP_10689401.1| putative Ser protein kinase [Pseudomonas sp. GM25]
gi|398133935|gb|EJM23116.1| putative Ser protein kinase [Pseudomonas sp. GM25]
Length = 640
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IPR R+ ++ + L + G + S R V +++ +AV K+ G
Sbjct: 162 GIPR--RYLNTIMSPWATKRL--------AEFGGDISQFRVVKLYPSILNQIAVAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|295394390|ref|ZP_06804614.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Brevibacterium mcbrellneri ATCC 49030]
gi|294972742|gb|EFG48593.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Brevibacterium mcbrellneri ATCC 49030]
Length = 523
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 55 REVLQSYDQLRTRIGSLTDAKNKILSYTPGAWIENVGGMTLSDYD--VPKTTSLLLIGPK 112
R++LQS ++ R DA + + A +E+ + L+D +P T + L+G
Sbjct: 237 RKLLQSVPRITDRAAEEQDASETVAARVEHARVEHGSTVALNDVSLTIPAHTIVGLVGES 296
Query: 113 GSGKSSLVNRISKVFENDKFASERAQVTYNSSV 145
GSGKS++ N ++ K AS A+V + V
Sbjct: 297 GSGKSTIANVLTGA---QKLASGTAEVAGTAVV 326
>gi|70732941|ref|YP_262712.1| PrkA family serine protein kinase [Pseudomonas protegens Pf-5]
gi|68347240|gb|AAY94846.1| protein kinase YeaG [Pseudomonas protegens Pf-5]
Length = 640
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IPR R+ ++ + L + G + S R V +++ +AV K+ G
Sbjct: 162 GIPR--RYLNTIMSPWATKRL--------SEFGGDISQFRVVKLYPSILNQIAVAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|398937169|ref|ZP_10667208.1| putative Ser protein kinase [Pseudomonas sp. GM41(2012)]
gi|398167152|gb|EJM55232.1| putative Ser protein kinase [Pseudomonas sp. GM41(2012)]
Length = 640
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IPR R+ ++ + L + G + S R V +++ +AV K+ G
Sbjct: 162 GIPR--RYLNTIMSPWATKRL--------AEFGGDISQFRVVKLYPSILNQIAVAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|395495213|ref|ZP_10426792.1| PrkA family serine protein kinase [Pseudomonas sp. PAMC 25886]
gi|395796293|ref|ZP_10475591.1| PrkA family serine protein kinase [Pseudomonas sp. Ag1]
gi|421139617|ref|ZP_15599651.1| thiosulfate sulfurtransferase [Pseudomonas fluorescens BBc6R8]
gi|395339595|gb|EJF71438.1| PrkA family serine protein kinase [Pseudomonas sp. Ag1]
gi|404509189|gb|EKA23125.1| thiosulfate sulfurtransferase [Pseudomonas fluorescens BBc6R8]
Length = 640
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IPR R+ ++ + L + G + S R V +++ +AV K+ G
Sbjct: 162 GIPR--RYLNTIMSPWATKRL--------AEFGGDISQFRVVKLYPSILNQIAVAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|398841892|ref|ZP_10599098.1| putative Ser protein kinase [Pseudomonas sp. GM102]
gi|398856713|ref|ZP_10612431.1| putative Ser protein kinase [Pseudomonas sp. GM79]
gi|398901155|ref|ZP_10650106.1| putative Ser protein kinase [Pseudomonas sp. GM50]
gi|399000538|ref|ZP_10703264.1| putative Ser protein kinase [Pseudomonas sp. GM18]
gi|398107256|gb|EJL97262.1| putative Ser protein kinase [Pseudomonas sp. GM102]
gi|398129765|gb|EJM19121.1| putative Ser protein kinase [Pseudomonas sp. GM18]
gi|398180274|gb|EJM67860.1| putative Ser protein kinase [Pseudomonas sp. GM50]
gi|398242685|gb|EJN28292.1| putative Ser protein kinase [Pseudomonas sp. GM79]
Length = 640
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IPR R+ ++ + L + G + S R V +++ +AV K+ G
Sbjct: 162 GIPR--RYLNTIMSPWATKRL--------AEFGGDISQFRVVKLYPSILNQIAVAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|398866841|ref|ZP_10622315.1| putative Ser protein kinase [Pseudomonas sp. GM78]
gi|398238854|gb|EJN24575.1| putative Ser protein kinase [Pseudomonas sp. GM78]
Length = 640
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLMERVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IPR R+ ++ + L + G + S R V +++ +AV K+ G
Sbjct: 162 GIPR--RYLNTIMSPWATKRL--------AEFGGDISQFRVVKLYPSILNQIAVAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|237803355|ref|ZP_04590940.1| PrkA family serine protein kinase [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331025336|gb|EGI05392.1| PrkA family serine protein kinase [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 640
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IP RR S+ + + + G + S + V +++ +AV K+ G
Sbjct: 162 GIP----------RRYLSTIMSPWATKRLAEFGGDISQFKVVKLYPSILNQIAVAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|423093360|ref|ZP_17081156.1| protein kinase YeaG [Pseudomonas fluorescens Q2-87]
gi|397882482|gb|EJK98969.1| protein kinase YeaG [Pseudomonas fluorescens Q2-87]
Length = 640
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IPR R+ ++ + L + G + S R V +++ +AV K+ G
Sbjct: 162 GIPR--RYLNTIMSPWATKRL--------AEFGGDISQFRVVKLYPSILNQIAVAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|422647524|ref|ZP_16710652.1| PrkA family serine protein kinase [Pseudomonas syringae pv.
maculicola str. ES4326]
gi|330961066|gb|EGH61326.1| PrkA family serine protein kinase [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 640
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNASEDGAILEEDF 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IP RR S+ + + + G + S + V +++ +AV K+ G
Sbjct: 162 GIP----------RRYLSTIMSPWATKRLAEFGGDISQFKVVKLYPSILNQIAVAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|398875245|ref|ZP_10630423.1| putative Ser protein kinase [Pseudomonas sp. GM67]
gi|398883041|ref|ZP_10638002.1| putative Ser protein kinase [Pseudomonas sp. GM60]
gi|398197614|gb|EJM84590.1| putative Ser protein kinase [Pseudomonas sp. GM60]
gi|398208175|gb|EJM94913.1| putative Ser protein kinase [Pseudomonas sp. GM67]
Length = 640
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IPR R+ ++ + L + G + S R V +++ +AV K+ G
Sbjct: 162 GIPR--RYLNTIMSPWATKRL--------AEFGGDISQFRVVKLYPSILNQIAVAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|398853800|ref|ZP_10610392.1| putative Ser protein kinase [Pseudomonas sp. GM80]
gi|398983248|ref|ZP_10689920.1| putative Ser protein kinase [Pseudomonas sp. GM24]
gi|399011942|ref|ZP_10714271.1| putative Ser protein kinase [Pseudomonas sp. GM16]
gi|398116952|gb|EJM06708.1| putative Ser protein kinase [Pseudomonas sp. GM16]
gi|398157434|gb|EJM45823.1| putative Ser protein kinase [Pseudomonas sp. GM24]
gi|398238417|gb|EJN24146.1| putative Ser protein kinase [Pseudomonas sp. GM80]
Length = 640
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IPR R+ ++ + L + G + S R V +++ +AV K+ G
Sbjct: 162 GIPR--RYLNTIMSPWATKRL--------AEFGGDISQFRVVKLYPSILNQIAVAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|302185947|ref|ZP_07262620.1| putative serine protein kinase, PrkA [Pseudomonas syringae pv.
syringae 642]
Length = 640
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IP RR S+ + + + G + S + V +++ +AV K+ G
Sbjct: 162 GIP----------RRYLSTIMSPWATKRLSEFGGDISQFKVVKLYPSILNQIAVAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|443641945|ref|ZP_21125795.1| PrkA family serine protein kinase [Pseudomonas syringae pv.
syringae B64]
gi|443281962|gb|ELS40967.1| PrkA family serine protein kinase [Pseudomonas syringae pv.
syringae B64]
Length = 640
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IP RR S+ + + + G + S + V +++ +AV K+ G
Sbjct: 162 GIP----------RRYLSTIMSPWATKRLAEFGGDISQFKVVKLYPSILNQIAVAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|254773103|ref|ZP_05214619.1| ABC transporter, ATP-binding protein [Mycobacterium avium subsp.
avium ATCC 25291]
Length = 248
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 26/35 (74%)
Query: 97 DYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDK 131
D D P +++ +IGP GSGKS+L+ +++++E D+
Sbjct: 31 DLDTPAGSTVAVIGPSGSGKSTLLRTLNRLYEPDR 65
>gi|422629411|ref|ZP_16694615.1| PrkA family serine protein kinase [Pseudomonas syringae pv. pisi
str. 1704B]
gi|422668604|ref|ZP_16728459.1| PrkA family serine protein kinase [Pseudomonas syringae pv. aptata
str. DSM 50252]
gi|424068230|ref|ZP_17805686.1| hypothetical protein Pav013_2850 [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
gi|424074239|ref|ZP_17811649.1| hypothetical protein Pav037_4368 [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
gi|330938467|gb|EGH42072.1| PrkA family serine protein kinase [Pseudomonas syringae pv. pisi
str. 1704B]
gi|330980968|gb|EGH79071.1| PrkA family serine protein kinase [Pseudomonas syringae pv. aptata
str. DSM 50252]
gi|407994744|gb|EKG35303.1| hypothetical protein Pav037_4368 [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
gi|407998612|gb|EKG39016.1| hypothetical protein Pav013_2850 [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
Length = 640
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IP RR S+ + + + G + S + V +++ +AV K+ G
Sbjct: 162 GIP----------RRYLSTIMSPWATKRLAEFGGDISQFKVVKLYPSILNQIAVAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|283768202|ref|ZP_06341115.1| ABC transporter, ATP-binding protein [Bulleidia extructa W1219]
gi|283105079|gb|EFC06450.1| ABC transporter, ATP-binding protein [Bulleidia extructa W1219]
Length = 605
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 16/82 (19%)
Query: 97 DYDVPKTTSLLLIGPKGSGKSSLVNRISKVFE--------NDKFASERAQVTYNSSVGDG 148
+ D+P T++ ++G G+GKS+LVN + + +E + K A +R+Q+ +S +G
Sbjct: 379 NLDIPHGTNVAIVGETGAGKSTLVNLVCRFYEPTRGRILIDGKDARDRSQLWLHSHIG-- 436
Query: 149 TYFLQ-----EYTIPRGVRHGE 165
Y LQ T+ +R+G+
Sbjct: 437 -YVLQTPQLFSGTVRENMRYGK 457
>gi|66047858|ref|YP_237699.1| PrkA serine kinase [Pseudomonas syringae pv. syringae B728a]
gi|289676159|ref|ZP_06497049.1| putative serine protein kinase, PrkA [Pseudomonas syringae pv.
syringae FF5]
gi|422618515|ref|ZP_16687212.1| PrkA family serine protein kinase [Pseudomonas syringae pv.
japonica str. M301072]
gi|422673111|ref|ZP_16732472.1| PrkA family serine protein kinase [Pseudomonas syringae pv. aceris
str. M302273]
gi|440721012|ref|ZP_20901422.1| PrkA family serine protein kinase [Pseudomonas syringae BRIP34876]
gi|440727213|ref|ZP_20907452.1| PrkA family serine protein kinase [Pseudomonas syringae BRIP34881]
gi|63258565|gb|AAY39661.1| PrkA serine kinase [Pseudomonas syringae pv. syringae B728a]
gi|330898892|gb|EGH30311.1| PrkA family serine protein kinase [Pseudomonas syringae pv.
japonica str. M301072]
gi|330970846|gb|EGH70912.1| PrkA family serine protein kinase [Pseudomonas syringae pv. aceris
str. M302273]
gi|440364407|gb|ELQ01539.1| PrkA family serine protein kinase [Pseudomonas syringae BRIP34881]
gi|440364785|gb|ELQ01907.1| PrkA family serine protein kinase [Pseudomonas syringae BRIP34876]
Length = 640
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IP RR S+ + + + G + S + V +++ +AV K+ G
Sbjct: 162 GIP----------RRYLSTIMSPWATKRLAEFGGDISQFKVVKLYPSILNQIAVAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|402700971|ref|ZP_10848950.1| PrkA family serine protein kinase [Pseudomonas fragi A22]
Length = 640
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IP +R S+ + + + G + S R V +++ +AV K+ G
Sbjct: 162 GIP----------KRYLSTIMSPWATKRLAEFGGDISQFRVVKLYPSILNQIAVAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|330796525|ref|XP_003286317.1| hypothetical protein DICPUDRAFT_15780 [Dictyostelium purpureum]
gi|325083744|gb|EGC37189.1| hypothetical protein DICPUDRAFT_15780 [Dictyostelium purpureum]
Length = 821
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 64 LRTRIGSLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRI 123
L + S ++KNKIL + N + + K SLLL GP+ SGKS+++N +
Sbjct: 258 LLNNLESFDNSKNKILKLLNIYFGNNKESLKYDSLGISKARSLLLYGPQSSGKSTIINGL 317
Query: 124 SKVFE 128
+K +
Sbjct: 318 AKYLD 322
>gi|118465112|ref|YP_879358.1| ABC transporter ATP-binding protein [Mycobacterium avium 104]
gi|118166399|gb|ABK67296.1| ABC transporter, ATP-binding protein [Mycobacterium avium 104]
Length = 248
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 26/35 (74%)
Query: 97 DYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDK 131
D D P +++ +IGP GSGKS+L+ +++++E D+
Sbjct: 31 DLDTPAGSTVAVIGPSGSGKSTLLRTLNRLYEPDR 65
>gi|443291846|ref|ZP_21030940.1| ABC transporter ATP-binding protein (multidrug transport)
[Micromonospora lupini str. Lupac 08]
gi|385885034|emb|CCH19047.1| ABC transporter ATP-binding protein (multidrug transport)
[Micromonospora lupini str. Lupac 08]
Length = 597
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Query: 83 PGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFE 128
PG+ + G+TL DVP TSL L+G GSGKS+L +S++ +
Sbjct: 373 PGSDTAALAGITL---DVPAGTSLALVGETGSGKSTLAGLVSRLHD 415
>gi|422642718|ref|ZP_16706134.1| PrkA family serine protein kinase [Pseudomonas syringae Cit 7]
gi|440744088|ref|ZP_20923394.1| PrkA family serine protein kinase [Pseudomonas syringae BRIP39023]
gi|330955098|gb|EGH55358.1| PrkA family serine protein kinase [Pseudomonas syringae Cit 7]
gi|440374544|gb|ELQ11272.1| PrkA family serine protein kinase [Pseudomonas syringae BRIP39023]
Length = 640
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IP RR S+ + + + G + S + V +++ +AV K+ G
Sbjct: 162 GIP----------RRYLSTIMSPWATKRLAEFGGDISQFKVVKLYPSILNQIAVAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|418048649|ref|ZP_12686736.1| Phosphate-transporting ATPase [Mycobacterium rhodesiae JS60]
gi|353189554|gb|EHB55064.1| Phosphate-transporting ATPase [Mycobacterium rhodesiae JS60]
Length = 242
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 26/35 (74%)
Query: 97 DYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDK 131
D DVP ++ +IGP GSGKS+L+ +++++E D+
Sbjct: 25 DLDVPAGSTSAVIGPSGSGKSTLLRTLNRLYEPDR 59
>gi|417749082|ref|ZP_12397489.1| ABC-type polar amino acid transport system, ATPase component
[Mycobacterium avium subsp. paratuberculosis S397]
gi|336459434|gb|EGO38376.1| ABC-type polar amino acid transport system, ATPase component
[Mycobacterium avium subsp. paratuberculosis S397]
Length = 248
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 26/35 (74%)
Query: 97 DYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDK 131
D D P +++ +IGP GSGKS+L+ +++++E D+
Sbjct: 31 DLDTPAGSTVAVIGPSGSGKSTLLRTLNRLYEPDR 65
>gi|41406149|ref|NP_958985.1| GluA [Mycobacterium avium subsp. paratuberculosis K-10]
gi|440775401|ref|ZP_20954274.1| GluA [Mycobacterium avium subsp. paratuberculosis S5]
gi|41394497|gb|AAS02368.1| GluA [Mycobacterium avium subsp. paratuberculosis K-10]
gi|436724580|gb|ELP48269.1| GluA [Mycobacterium avium subsp. paratuberculosis S5]
Length = 248
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 26/35 (74%)
Query: 97 DYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDK 131
D D P +++ +IGP GSGKS+L+ +++++E D+
Sbjct: 31 DLDTPAGSTVAVIGPSGSGKSTLLRTLNRLYEPDR 65
>gi|154412497|ref|XP_001579281.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121913486|gb|EAY18295.1| hypothetical protein TVAG_254070 [Trichomonas vaginalis G3]
Length = 150
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 74 AKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFEND 130
KN + +Y ++ V G+ D+D+ K +LLIGP GSGKS+L+ ++ D
Sbjct: 42 VKNLVKTYNTHRIVKAVNGV---DFDIQKGEIILLIGPNGSGKSTLLQSLTGALTTD 95
>gi|218442100|ref|YP_002380429.1| ABC transporter [Cyanothece sp. PCC 7424]
gi|218174828|gb|ACK73561.1| ABC transporter domain protein [Cyanothece sp. PCC 7424]
Length = 563
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 98 YDVPKTTSLLLIGPKGSGKSSLVNRISKVFE 128
YD+P SLL++GP GSGKSSL+ ++ ++E
Sbjct: 373 YDLPLGESLLIMGPSGSGKSSLLRALAGLWE 403
>gi|404398419|ref|ZP_10990003.1| PrkA family serine protein kinase [Pseudomonas fuscovaginae
UPB0736]
Length = 640
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIERVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IPR R+ ++ + L + G + S R V +++ +AV K+ G
Sbjct: 162 GIPR--RYLNTIMSPWATKRLA--------EFGGDISQFRVVKLYPSILNQIAVAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|344205313|ref|YP_004790455.1| glycerol ABC transporter ATP-binding protein [Mycoplasma
putrefaciens KS1]
gi|194021478|gb|ACF32337.1| GtsA [Mycoplasma putrefaciens KS1]
gi|343957236|gb|AEM68951.1| Glycerol ABC transporter, ATP-binding protein [Mycoplasma
putrefaciens KS1]
Length = 408
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 88 ENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGD 147
+N + + D ++PK + L+GP GSGK++L+N I K +S + N + +
Sbjct: 24 QNQHNLEIQDLEIPKDQIISLLGPSGSGKTTLLNLILGYL---KPSSGTISIKNNPKIHE 80
Query: 148 GTYFLQEYTIPRGV 161
Y +QE +I V
Sbjct: 81 IAYIMQEGSIYENV 94
>gi|71734132|ref|YP_272928.1| protein kinase [Pseudomonas syringae pv. phaseolicola 1448A]
gi|257483102|ref|ZP_05637143.1| protein kinase [Pseudomonas syringae pv. tabaci str. ATCC 11528]
gi|289627692|ref|ZP_06460646.1| putative serine protein kinase, PrkA [Pseudomonas syringae pv.
aesculi str. NCPPB 3681]
gi|289649011|ref|ZP_06480354.1| putative serine protein kinase, PrkA [Pseudomonas syringae pv.
aesculi str. 2250]
gi|416014376|ref|ZP_11562203.1| putative serine protein kinase, PrkA [Pseudomonas syringae pv.
glycinea str. B076]
gi|422583659|ref|ZP_16658780.1| PrkA family serine protein kinase [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|422595496|ref|ZP_16669783.1| PrkA family serine protein kinase [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|422607552|ref|ZP_16679550.1| PrkA family serine protein kinase [Pseudomonas syringae pv. mori
str. 301020]
gi|422682325|ref|ZP_16740591.1| PrkA family serine protein kinase [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
gi|71554685|gb|AAZ33896.1| protein kinase [Pseudomonas syringae pv. phaseolicola 1448A]
gi|298160146|gb|EFI01175.1| Serine protein kinase [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
gi|320326005|gb|EFW82063.1| putative serine protein kinase, PrkA [Pseudomonas syringae pv.
glycinea str. B076]
gi|330868487|gb|EGH03196.1| PrkA family serine protein kinase [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|330891192|gb|EGH23853.1| PrkA family serine protein kinase [Pseudomonas syringae pv. mori
str. 301020]
gi|330985800|gb|EGH83903.1| PrkA family serine protein kinase [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|331011665|gb|EGH91721.1| PrkA family serine protein kinase [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
Length = 640
Score = 37.7 bits (86), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIERVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IP RR S+ + + + G + S + V +++ +AV K+ G
Sbjct: 162 GIP----------RRYLSTIMSPWATKRLAEFGGDISQFKVVKLYPSILNQIAVAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|340789330|ref|YP_004754795.1| putative serine protein kinase, PrkA [Collimonas fungivorans
Ter331]
gi|340554597|gb|AEK63972.1| putative serine protein kinase, PrkA [Collimonas fungivorans
Ter331]
Length = 640
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
Query: 106 LLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEYTIPR 159
L L+GP G GKSS+ R+ ++ E+ F S + S +G DG ++Y IPR
Sbjct: 106 LYLLGPVGGGKSSIAERLKQLMEHVPFYSLKGSPVNESPLGLFDYEEDGAILEEQYGIPR 165
>gi|254478558|ref|ZP_05091932.1| hypothetical protein CDSM653_1628 [Carboxydibrachium pacificum DSM
12653]
gi|214035487|gb|EEB76187.1| hypothetical protein CDSM653_1628 [Carboxydibrachium pacificum DSM
12653]
Length = 189
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 87 IENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQ 138
I+N + +++ P++ L+L+GP SGKS+++ I+ + D +SER Q
Sbjct: 8 IKNFRSIKHLEFEFPESNLLVLVGPNNSGKSNIIRAINLICGEDWVSSERLQ 59
>gi|416021886|ref|ZP_11567177.1| putative serine protein kinase, PrkA [Pseudomonas syringae pv.
glycinea str. race 4]
gi|320332060|gb|EFW87996.1| putative serine protein kinase, PrkA [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 640
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIERVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IP RR S+ + + + G + S + V +++ +AV K+ G
Sbjct: 162 GIP----------RRYLSTIMSPWATKRLAEFGGDISQFKVVKLYPSILNQIAVAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|94499968|ref|ZP_01306503.1| hypothetical protein RED65_12049 [Bermanella marisrubri]
gi|94427826|gb|EAT12801.1| hypothetical protein RED65_12049 [Oceanobacter sp. RED65]
Length = 640
Score = 37.7 bits (86), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 16/119 (13%)
Query: 106 LLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEYTIPR 159
L L+GP G GKSSL R+ + + F + + + S +G D T ++Y IP+
Sbjct: 106 LYLLGPVGGGKSSLAERLKHLVQKVPFYAIQGSPVFESPLGLFDPDEDATILEEDYGIPK 165
Query: 160 GVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEGDSD 218
G + S R+R + + S + V ++D +AV K+ GD +
Sbjct: 166 RYVRGIM------SPWAAKRLR----EFKGDISQFKVVKLYPSIIDQIAVAKTEPGDEN 214
>gi|420418262|ref|ZP_14917354.1| ABC transporter, ATP-binding protein [Helicobacter pylori NQ4076]
gi|393033088|gb|EJB34151.1| ABC transporter, ATP-binding protein [Helicobacter pylori NQ4076]
Length = 233
Score = 37.7 bits (86), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 93/234 (39%), Gaps = 43/234 (18%)
Query: 79 LSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQ 138
+S P +N + + D+ TS +IG G+GKS+L+N I + E+ F ++
Sbjct: 5 ISIHPKTMFKN--ALNIQDFSFKSHTSTAIIGTNGAGKSTLINTILGIREDYNFKAQNNN 62
Query: 139 VTYNSSVGDGTYFL----QEYTIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVI 194
+ Y+ +V L + P G+ +L + HK C P++
Sbjct: 63 IPYHDNVIPQRKQLGVVSNLFNYPPGLNANDLF-----------KFYQFFHK-NCTPNLF 110
Query: 195 RKVNFVIFVVDGLAVLKSMEGDSDVEKQYNQIVATTFNCPYLSFRDDKPVVVVTHGDLLS 254
K + K+ E SD +KQ +I + P L D+ S
Sbjct: 111 EKN----------LLNKTYEHLSDGQKQRLKIDLALSHHPQLIIMDEPET---------S 151
Query: 255 LTDRARIRTYLGELLGIPPAKQIFDIPESSDPENELIIVDMLRYCLEHADRNLS 308
L A IR L L+ + +Q+ I + DP II++ ++ L + N++
Sbjct: 152 LEQNALIR--LSNLISLRNTQQLTSIIATHDP----IILESCKWVLFLKNGNIA 199
>gi|303234006|ref|ZP_07320655.1| ABC transporter, ATP-binding protein [Finegoldia magna BVS033A4]
gi|302494931|gb|EFL54688.1| ABC transporter, ATP-binding protein [Finegoldia magna BVS033A4]
Length = 579
Score = 37.7 bits (86), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 32 GDDEGSRDSWDSLVDQRRRDAVFREVLQSYDQLRTRIGSLTDAKNKILSYTPGAWIENVG 91
GD E + S + D + D + + D + ++ + KN +Y ++NV
Sbjct: 311 GDMEQAYASASHIFDIMKLDTI-----EKSDGVIDKLEGNIEFKNVYFAYDKNDVLKNVS 365
Query: 92 GMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFE 128
+ +PK+TS +G GSGKS+++N I K ++
Sbjct: 366 ------FKIPKSTSAAFVGTTGSGKSTILNLILKFYD 396
>gi|319780035|ref|YP_004139511.1| ABC transporter [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317165923|gb|ADV09461.1| ABC transporter related protein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 311
Score = 37.7 bits (86), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 59 QSYDQLRTRIGSLTDAKNKILSYTPGAWIENVGGMTLSDYD--VPKTTSLLLIGPKGSGK 116
QS++ + G++ + +LS G + G + L+D D V + +IGP G+GK
Sbjct: 33 QSFEDVAKSAGAVAGDASALLSLQ-GISLSFGGVVALADIDLSVRQGEIRAIIGPNGAGK 91
Query: 117 SSLVNRISKVFENDK 131
SSL+N IS V+ D+
Sbjct: 92 SSLINVISGVYRPDR 106
>gi|415912154|ref|ZP_11553503.1| PrkA serine kinase [Herbaspirillum frisingense GSF30]
gi|407762140|gb|EKF71048.1| PrkA serine kinase [Herbaspirillum frisingense GSF30]
Length = 599
Score = 37.7 bits (86), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSS+ R+ ++ E F S + S +G DG ++Y
Sbjct: 61 KKQILYLLGPVGGGKSSIAERLKQLMEQVPFYSIKGSPVNESPLGLFDYDEDGAILEEQY 120
Query: 156 TIPR 159
IPR
Sbjct: 121 GIPR 124
>gi|347832278|emb|CCD47975.1| similar to ABC transporter [Botryotinia fuckeliana]
Length = 1437
Score = 37.7 bits (86), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 4/110 (3%)
Query: 14 EGEEIISPVDDFDIPLLSGDDEGSRDSWDSLVDQRRRDAVFREVLQSYDQLRTRIGSLTD 73
+ + ++ ++FD +++ E S S D D + +D ++S D L I L +
Sbjct: 541 DSQSLVDKREEFDFNVIA-RSEASLASTD---DIKLKDLKHSREIKSSDFLNLPIMPLVN 596
Query: 74 AKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRI 123
+ WIEN + D + PK+ ++IGP SGKS+L N I
Sbjct: 597 KIGIKIQGGAFGWIENRHTLHHIDLEFPKSQLTMVIGPVASGKSTLCNAI 646
>gi|295106438|emb|CBL03981.1| ABC-type multidrug transport system, ATPase and permease components
[Gordonibacter pamelaeae 7-10-1-b]
Length = 580
Score = 37.7 bits (86), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 100 VPKTTSLLLIGPKGSGKSSLVNRISKVFENDK-FAS----------ERAQVTYNSSVGDG 148
+P+ TS ++GP GSGK++LVN +++ ++ D+ F S + +++ S V
Sbjct: 358 IPEGTSCAIVGPSGSGKTTLVNLLARFWDVDEGFVSVGGADVRDGTAESLLSHISLVFQN 417
Query: 149 TYFLQEYTIPRGVRHGELVIRRSDSSSLRNRMRCK 183
Y + T+ +R G R + + R RC
Sbjct: 418 VYLFND-TVENNIRFGRPDASRDEVVAAARRARCH 451
>gi|171186251|ref|YP_001795170.1| ABC transporter [Pyrobaculum neutrophilum V24Sta]
gi|170935463|gb|ACB40724.1| ABC transporter related [Pyrobaculum neutrophilum V24Sta]
Length = 246
Score = 37.7 bits (86), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Query: 87 IENVGGMTLSD---YDVPKTTSLLLIGPKGSGKSSLVNRISKVFEND 130
++ GG+T D VP+ + ++L GP GSGK++L+N IS ++ D
Sbjct: 13 VKKFGGLTALDGASISVPQNSFVILAGPNGSGKTTLLNVISGLYRPD 59
>gi|430748567|ref|YP_007211475.1| multidrug ABC transporter ATPase/permease [Thermobacillus composti
KWC4]
gi|430732532|gb|AGA56477.1| ABC-type multidrug transport system, ATPase and permease component
[Thermobacillus composti KWC4]
Length = 572
Score = 37.7 bits (86), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 8/57 (14%)
Query: 99 DVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQEY 155
D+PK T L ++GP GSGKS+L++ I + + D + ++ G + LQ+Y
Sbjct: 362 DIPKGTKLAVVGPNGSGKSTLMHIIGGILKPDTGTVQTDEI--------GGFCLQDY 410
>gi|194333784|ref|YP_002015644.1| FAD linked oxidase domain-containing protein [Prosthecochloris
aestuarii DSM 271]
gi|194311602|gb|ACF45997.1| FAD linked oxidase domain protein [Prosthecochloris aestuarii DSM
271]
Length = 1221
Score = 37.7 bits (86), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 47/121 (38%), Gaps = 17/121 (14%)
Query: 24 DFDIPLLSGDDEGSRDSWDSLVDQRRRDAVFREVLQSYDQLRTRI----------GSLTD 73
++ I + SG+ R + L D V E++ S +R RI G D
Sbjct: 314 EWKIAMPSGESWSVRRTDHRLRKIMHEDTVTYEIVDSQGDIRNRIELLGTDIRKKGLWKD 373
Query: 74 AKNKILSYTPGAWIENVGGMTLS-------DYDVPKTTSLLLIGPKGSGKSSLVNRISKV 126
NK L PG E G+ S Y+V KT L GP S ++ +SK+
Sbjct: 374 ITNKALGGVPGLQKEGTDGVITSAHFILYPKYEVTKTLCLEFFGPDMDEASRVIVELSKI 433
Query: 127 F 127
F
Sbjct: 434 F 434
>gi|169824390|ref|YP_001692001.1| multidrug ABC transporter [Finegoldia magna ATCC 29328]
gi|167831195|dbj|BAG08111.1| multidrug ABC transporter [Finegoldia magna ATCC 29328]
Length = 579
Score = 37.7 bits (86), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 32 GDDEGSRDSWDSLVDQRRRDAVFREVLQSYDQLRTRIGSLTDAKNKILSYTPGAWIENVG 91
GD E + S + D + D + + D + ++ + KN +Y ++NV
Sbjct: 311 GDMEQAYASASHIFDIMKLDTI-----EKSDGVIDKLEGNIEFKNVYFAYDKNDVLKNVS 365
Query: 92 GMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFE 128
+ +PK+TS +G GSGKS+++N I K ++
Sbjct: 366 ------FKIPKSTSAAFVGTTGSGKSTILNLILKFYD 396
>gi|417925980|ref|ZP_12569393.1| ABC transporter transmembrane region [Finegoldia magna
SY403409CC001050417]
gi|341590582|gb|EGS33820.1| ABC transporter transmembrane region [Finegoldia magna
SY403409CC001050417]
Length = 579
Score = 37.7 bits (86), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 32 GDDEGSRDSWDSLVDQRRRDAVFREVLQSYDQLRTRIGSLTDAKNKILSYTPGAWIENVG 91
GD E + S + D + D + + D + ++ + KN +Y ++NV
Sbjct: 311 GDMEQAYASASHIFDIMKLDTI-----EKSDGVIDKLEGNIEFKNVYFAYDKNDVLKNVS 365
Query: 92 GMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFE 128
+ +PK+TS +G GSGKS+++N I K ++
Sbjct: 366 ------FKIPKSTSAAFVGTTGSGKSTILNLILKFYD 396
>gi|419445411|ref|ZP_13985425.1| ABC transporter transmembrane region family protein [Streptococcus
pneumoniae GA19923]
gi|379570469|gb|EHZ35432.1| ABC transporter transmembrane region family protein [Streptococcus
pneumoniae GA19923]
Length = 633
Score = 37.7 bits (86), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 68 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTTS----LLLIGPKGSGKSS 118
IGS K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 373 IGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSVTAHAGQRVAIVGPTGAGKTT 432
Query: 119 LVNRISKVFENDK 131
+VN + K +E DK
Sbjct: 433 IVNLLMKFYEIDK 445
>gi|418147170|ref|ZP_12783945.1| ABC transporter family protein [Streptococcus pneumoniae GA13637]
gi|421218639|ref|ZP_15675528.1| ABC transporter family protein [Streptococcus pneumoniae 2070335]
gi|353811198|gb|EHD91441.1| ABC transporter family protein [Streptococcus pneumoniae GA13637]
gi|395581955|gb|EJG42419.1| ABC transporter family protein [Streptococcus pneumoniae 2070335]
Length = 343
Score = 37.7 bits (86), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
Query: 68 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTT----SLLLIGPKGSGKSS 118
IGS K +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 83 IGSTGSGKLTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATAHAGQKVAIVGPTGAGKTT 142
Query: 119 LVNRISKVFENDK 131
+VN + K +E DK
Sbjct: 143 IVNLLMKFYEIDK 155
>gi|170723962|ref|YP_001751650.1| putative serine protein kinase PrkA [Pseudomonas putida W619]
gi|169761965|gb|ACA75281.1| putative serine protein kinase, PrkA [Pseudomonas putida W619]
Length = 640
Score = 37.4 bits (85), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +EY
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLMEKVPFYAIKDSPVFESPLGLFNATEDGAILEEEY 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
I R R+ ++ + L+ + G + S R V +++ +A+ K+ G
Sbjct: 162 GISR--RYLNTIMSPWATKRLQ--------EFGGDISKFRVVKLYPSILNQIAIAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|302142922|emb|CBI20217.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 37.4 bits (85), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 61/147 (41%), Gaps = 18/147 (12%)
Query: 3 GEKTTSRFFTPEGEEIISPVDDFDIPLLSGDDE-GSRDSWDSLVDQRRRDAVFREVLQSY 61
G K +RF P G+ ++S D P+ D E + D +D R A L
Sbjct: 22 GRKPLARF--PSGDFVLS-----DCPITVQDIEFATSQVGDFAIDNR---AGISRTLHRI 71
Query: 62 DQLRTRIGSLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVN 121
+R R G++ L+ G I G L V SLLLIGP G GK++++
Sbjct: 72 SAIRNRKGAIIG-----LTCRVGRAIS--GSANLLQDLVKDGASLLLIGPPGVGKTTIIR 124
Query: 122 RISKVFENDKFASERAQVTYNSSVGDG 148
++++ ND T N GDG
Sbjct: 125 EVARMLANDYKKRVMIVDTSNEIGGDG 151
>gi|290559164|gb|EFD92524.1| PrkA AAA domain protein [Candidatus Parvarchaeum acidophilus
ARMAN-5]
Length = 621
Score = 37.4 bits (85), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Query: 103 TTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSV---GDGTYFLQEYTIPR 159
T +LL+GP GSGK+ L+N I K ++ +++ + N S + + L +P+
Sbjct: 69 TPIILLLGPSGSGKTELINSILKAYKYYARSNDIFTLKINGSTCPYNENPFNLYRSILPK 128
Query: 160 GVR--HGELVIRRSDSSSLRNRMR 181
GV H E V+ S SL N+ R
Sbjct: 129 GVELPHDETVV----SQSLMNKKR 148
>gi|225461612|ref|XP_002282987.1| PREDICTED: uncharacterized protein ycf45 [Vitis vinifera]
Length = 667
Score = 37.4 bits (85), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 61/147 (41%), Gaps = 18/147 (12%)
Query: 3 GEKTTSRFFTPEGEEIISPVDDFDIPLLSGDDE-GSRDSWDSLVDQRRRDAVFREVLQSY 61
G K +RF P G+ ++S D P+ D E + D +D R A L
Sbjct: 117 GRKPLARF--PSGDFVLS-----DCPITVQDIEFATSQVGDFAIDNR---AGISRTLHRI 166
Query: 62 DQLRTRIGSLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVN 121
+R R G++ ++ G I G L V SLLLIGP G GK++++
Sbjct: 167 SAIRNRKGAIIGLTCRV-----GRAIS--GSANLLQDLVKDGASLLLIGPPGVGKTTIIR 219
Query: 122 RISKVFENDKFASERAQVTYNSSVGDG 148
++++ ND T N GDG
Sbjct: 220 EVARMLANDYKKRVMIVDTSNEIGGDG 246
>gi|371670945|ref|YP_004956901.1| unnamed protein product [Campylobacter phage CPX]
gi|343178475|emb|CBZ42306.1| hypothetical protein [Campylobacter phage CP81]
gi|356649789|gb|AET34332.1| putative helicase [Campylobacter phage CPX]
Length = 787
Score = 37.4 bits (85), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 12/111 (10%)
Query: 57 VLQSYDQLRTRIGS--LTDAKNKI----LSYTPGAWIENVGGMTLSDYDVPKTTSLLLIG 110
+LQ Y L+T+ G L + ++KI L YTP ++ L + D+P T + +
Sbjct: 256 ILQEY--LKTKDGKAFLQERQSKIILSSLKYTPDI---HINQKFLKNVDIPDTRVVCVKS 310
Query: 111 PKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGT-YFLQEYTIPRG 160
P GSGKS+++N+ K F S R + + S+ G Y+L++ I G
Sbjct: 311 PMGSGKSNIINQYIKNKSKVLFISVRQTLAKDISLKYGCKYYLEDKKILYG 361
>gi|66523779|ref|XP_625030.1| PREDICTED: origin recognition complex subunit 4 [Apis mellifera]
Length = 451
Score = 37.4 bits (85), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 28/42 (66%)
Query: 99 DVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVT 140
D+ ++ S+LLIGP+GSGK++L+N + K + K E A +
Sbjct: 53 DMGESNSVLLIGPRGSGKTTLINSVLKELSHVKSFKENALIV 94
>gi|402566583|ref|YP_006615928.1| serine protein kinase PrkA [Burkholderia cepacia GG4]
gi|402247780|gb|AFQ48234.1| putative serine protein kinase PrkA [Burkholderia cepacia GG4]
Length = 640
Score = 37.4 bits (85), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 55/130 (42%), Gaps = 17/130 (13%)
Query: 36 GSRDSWDSLVDQRRRDAVFREVLQSYDQLRTRIGSLTDAKNKILSYTPGAWIENVGGMTL 95
G + D+ +D R +V++ Y R G + + ++++Y A G+
Sbjct: 47 GEPEQIDTRIDPRLSRIFANKVIKVYPAFREFYG-MEEVIEQVVAYFRHA----AQGLE- 100
Query: 96 SDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGT 149
K L L+GP G GKSS+ R+ ++ E F S + S +G DG
Sbjct: 101 -----EKKQILYLLGPVGGGKSSIAERLKQLMERVPFYSLKGSPVNESPLGLFDYDEDGP 155
Query: 150 YFLQEYTIPR 159
++Y IPR
Sbjct: 156 ILEEQYGIPR 165
>gi|377820709|ref|YP_004977080.1| putative serine protein kinase PrkA [Burkholderia sp. YI23]
gi|357935544|gb|AET89103.1| putative serine protein kinase, PrkA [Burkholderia sp. YI23]
Length = 640
Score = 37.4 bits (85), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 54/130 (41%), Gaps = 17/130 (13%)
Query: 36 GSRDSWDSLVDQRRRDAVFREVLQSYDQLRTRIGSLTDAKNKILSYTPGAWIENVGGMTL 95
G + D+ +D R +V++ Y R G + + ++SY A G+
Sbjct: 47 GEPEHVDTRLDPRLSRVFANKVIKVYPAFREFYG-MEEVIENVVSYFRHA----AQGLE- 100
Query: 96 SDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGT 149
K L L+GP G GKSS+ R+ ++ E F S + S +G DG
Sbjct: 101 -----EKKQILYLLGPVGGGKSSIAERLKQLMERVPFYSLKGSPVNESPLGLFDYDEDGP 155
Query: 150 YFLQEYTIPR 159
++Y IPR
Sbjct: 156 VLEEQYGIPR 165
>gi|167562829|ref|ZP_02355745.1| serine protein kinase [Burkholderia oklahomensis EO147]
gi|167570009|ref|ZP_02362883.1| serine protein kinase [Burkholderia oklahomensis C6786]
Length = 640
Score = 37.4 bits (85), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSS+ R+ ++ E F S + S +G DG ++Y
Sbjct: 102 KKQILYLLGPVGGGKSSIAERLKQLMERVSFYSLKGSPVNESPLGLFDYDEDGPILEEQY 161
Query: 156 TIPR 159
IPR
Sbjct: 162 GIPR 165
>gi|407801356|ref|ZP_11148200.1| PrkA family serine protein kinase [Alcanivorax sp. W11-5]
gi|407024793|gb|EKE36536.1| PrkA family serine protein kinase [Alcanivorax sp. W11-5]
Length = 640
Score = 37.4 bits (85), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 52/123 (42%), Gaps = 16/123 (13%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSSL ++ + + F + + S + DG +EY
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKSLMQKVPFYAIKGSPVNESPLALFDPHEDGPILEEEY 161
Query: 156 TIPRGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEG 215
IP L RS S + + H+ G + S R V ++D +A+ K+ G
Sbjct: 162 GIP-------LRYSRSIMSPWAVK---RLHEYGGDISRFRVVKLYPSILDQIAIAKTEPG 211
Query: 216 DSD 218
D +
Sbjct: 212 DEN 214
>gi|209522024|ref|ZP_03270683.1| putative serine protein kinase, PrkA [Burkholderia sp. H160]
gi|209497538|gb|EDZ97734.1| putative serine protein kinase, PrkA [Burkholderia sp. H160]
Length = 640
Score = 37.4 bits (85), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSS+ R+ ++ E F S + S +G DG ++Y
Sbjct: 102 KKQILYLLGPVGGGKSSIAERLKQLMERVPFYSIKGSPVNESPLGLFDYEEDGPILEEQY 161
Query: 156 TIPRGVRHGEL 166
IPR G L
Sbjct: 162 GIPRRYLKGIL 172
>gi|355695561|gb|AES00051.1| interferon-induced protein 44-like protein [Mustela putorius furo]
Length = 427
Score = 37.4 bits (85), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 12/78 (15%)
Query: 106 LLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG-DGTYFLQEYTI--PRGVR 162
+LL+GP GSGKSS +N + VF+ ++T + VG D T ++Y I + R
Sbjct: 214 ILLLGPVGSGKSSFINSVKSVFQ--------GRLTRQARVGSDVTSITEQYRIYPIKDRR 265
Query: 163 HGE-LVIRRSDSSSLRNR 179
HG+ L R DS L +
Sbjct: 266 HGKYLPFRLCDSMGLHEK 283
>gi|168183912|ref|ZP_02618576.1| putative ABC transporter, ATP-binding/permease protein [Clostridium
botulinum Bf]
gi|237795798|ref|YP_002863350.1| putative ABC transporter ATP-binding/permease [Clostridium
botulinum Ba4 str. 657]
gi|182672888|gb|EDT84849.1| putative ABC transporter, ATP-binding/permease protein [Clostridium
botulinum Bf]
gi|229260885|gb|ACQ51918.1| ABC transporter, ATP-binding protein [Clostridium botulinum Ba4
str. 657]
Length = 581
Score = 37.4 bits (85), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 25/34 (73%)
Query: 98 YDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDK 131
+ +P+ T+ ++GP GSGKS++ N IS+ ++ DK
Sbjct: 359 FIIPENTTTAIVGPSGSGKSTICNLISRFYDVDK 392
>gi|413962655|ref|ZP_11401882.1| PrkA family serine protein kinase [Burkholderia sp. SJ98]
gi|413928487|gb|EKS67775.1| PrkA family serine protein kinase [Burkholderia sp. SJ98]
Length = 640
Score = 37.4 bits (85), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSS+ R+ ++ E F S + S +G DG ++Y
Sbjct: 102 KKQILYLLGPVGGGKSSIAERLKQLMERVPFYSLKGSPVNESPLGLFDYDEDGPVLEEQY 161
Query: 156 TIPR 159
IPR
Sbjct: 162 GIPR 165
>gi|291241708|ref|XP_002740752.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
Length = 387
Score = 37.4 bits (85), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 101/264 (38%), Gaps = 53/264 (20%)
Query: 75 KNKILSYTPGAW--IENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKF 132
+NK+ YT G + IE+ G+ + ++ P + + GP G+GKSS + ++
Sbjct: 56 RNKLREYTFGEYNHIESFEGLDVLEFQQPGAIKIGVFGPAGAGKSSFIYTCERIINE--- 112
Query: 133 ASERAQVTYNSSVGDGTYFLQEYTIPRGVRHGELVIRR-------SDSSSLRNRM----- 180
R + G+GT L +Y G H +LV R S+ ++ N +
Sbjct: 113 -INRGTADVKTEGGEGTIRLMDYLY--GDWHYKLVDTRGFGTYGISELAAFSNILFGNVT 169
Query: 181 ---------RCKAHKIGCEPSVIRKVNFVIFVVDGL-AVLKSMEGDSDVEKQYNQIVATT 230
+ ++G E V ++ V+FVV +K +E T+
Sbjct: 170 VGNEVDFNSDARPAEVGEEGDVFNWIHSVVFVVSAKDPRIKQLE--------------TS 215
Query: 231 FNC--PYLSFRDDKPVVVVTHGDLLSLTDRARIRTYLGELLGIPPAKQIFDIPESSD--- 285
N YL R + V+TH D + ++ I+T + G F + D
Sbjct: 216 LNPMRKYLRPRGIGTITVITHRDQVDESEIEDIKTSVSAATGSAINHTFFVTNYTGDILS 275
Query: 286 ----PENELIIVDMLRYCLEHADR 305
P+ E I D+L L +R
Sbjct: 276 QPPRPDIEGITCDVLTAALIMGER 299
>gi|170732937|ref|YP_001764884.1| putative serine protein kinase PrkA [Burkholderia cenocepacia
MC0-3]
gi|206560027|ref|YP_002230791.1| PrkA family serine protein kinase [Burkholderia cenocepacia J2315]
gi|421870954|ref|ZP_16302579.1| Serine protein kinase (prkA protein), P-loop containing
[Burkholderia cenocepacia H111]
gi|444358592|ref|ZP_21159985.1| PrkA serine protein kinase [Burkholderia cenocepacia BC7]
gi|444372227|ref|ZP_21171713.1| PrkA serine protein kinase [Burkholderia cenocepacia K56-2Valvano]
gi|169816179|gb|ACA90762.1| putative serine protein kinase, PrkA [Burkholderia cenocepacia
MC0-3]
gi|198036068|emb|CAR51962.1| PrkA family serine protein kinase [Burkholderia cenocepacia J2315]
gi|358069102|emb|CCE53457.1| Serine protein kinase (prkA protein), P-loop containing
[Burkholderia cenocepacia H111]
gi|443593903|gb|ELT62600.1| PrkA serine protein kinase [Burkholderia cenocepacia K56-2Valvano]
gi|443603753|gb|ELT71738.1| PrkA serine protein kinase [Burkholderia cenocepacia BC7]
Length = 640
Score = 37.4 bits (85), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSS+ R+ ++ E F S + S +G DG ++Y
Sbjct: 102 KKQILYLLGPVGGGKSSIAERLKQLMERVPFYSLKGSPVNESPLGLFDYDEDGPILEEQY 161
Query: 156 TIPR 159
IPR
Sbjct: 162 GIPR 165
>gi|107022686|ref|YP_621013.1| serine protein kinase PrkA [Burkholderia cenocepacia AU 1054]
gi|116689635|ref|YP_835258.1| putative serine protein kinase PrkA [Burkholderia cenocepacia
HI2424]
gi|254245485|ref|ZP_04938806.1| hypothetical protein BCPG_00191 [Burkholderia cenocepacia PC184]
gi|105892875|gb|ABF76040.1| putative serine protein kinase, PrkA [Burkholderia cenocepacia AU
1054]
gi|116647724|gb|ABK08365.1| putative serine protein kinase, PrkA [Burkholderia cenocepacia
HI2424]
gi|124870261|gb|EAY61977.1| hypothetical protein BCPG_00191 [Burkholderia cenocepacia PC184]
Length = 640
Score = 37.4 bits (85), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 102 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 155
K L L+GP G GKSS+ R+ ++ E F S + S +G DG ++Y
Sbjct: 102 KKQILYLLGPVGGGKSSIAERLKQLMERVPFYSLKGSPVNESPLGLFDYDEDGPILEEQY 161
Query: 156 TIPR 159
IPR
Sbjct: 162 GIPR 165
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.136 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,042,267,432
Number of Sequences: 23463169
Number of extensions: 208349823
Number of successful extensions: 936863
Number of sequences better than 100.0: 304
Number of HSP's better than 100.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 222
Number of HSP's that attempted gapping in prelim test: 936650
Number of HSP's gapped (non-prelim): 364
length of query: 317
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 175
effective length of database: 9,027,425,369
effective search space: 1579799439575
effective search space used: 1579799439575
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 76 (33.9 bits)