Query 021149
Match_columns 316
No_of_seqs 128 out of 148
Neff 3.9
Searched_HMMs 29240
Date Mon Mar 25 13:27:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021149.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021149hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1qg8_A Protein (spore coat pol 88.3 1 3.5E-05 38.0 6.6 119 92-233 87-215 (255)
2 1xhb_A Polypeptide N-acetylgal 82.2 2.5 8.4E-05 40.0 6.7 137 92-236 113-262 (472)
3 2z86_A Chondroitin synthase; G 81.9 4.8 0.00016 39.3 8.8 216 17-237 93-335 (625)
4 2ffu_A Ppgalnact-2, polypeptid 78.1 2.8 9.4E-05 40.2 5.6 109 16-130 65-183 (501)
5 3bcv_A Putative glycosyltransf 65.8 4.2 0.00014 33.8 3.2 108 16-129 4-120 (240)
6 3f1y_A Mannosyl-3-phosphoglyce 64.8 8.6 0.00029 36.6 5.6 197 16-233 93-310 (387)
7 4fix_A UDP-galactofuranosyl tr 63.5 14 0.00049 37.6 7.2 37 93-129 268-305 (657)
8 2d7i_A Polypeptide N-acetylgal 63.0 23 0.00077 34.9 8.4 210 16-235 111-341 (570)
9 2c0n_A A197; thermophil protei 36.5 12 0.0004 33.9 1.3 38 82-126 45-85 (203)
10 2bo4_A Mannosylglycerate synth 35.8 22 0.00074 34.3 3.1 182 19-225 2-210 (397)
11 2nxv_A ATP synthase subunits r 29.4 31 0.0011 29.7 2.8 29 92-120 73-101 (249)
12 2z86_A Chondroitin synthase; G 28.1 65 0.0022 31.3 5.1 107 17-128 375-490 (625)
13 3l7i_A Teichoic acid biosynthe 26.0 14 0.00049 37.2 0.0 37 91-127 81-117 (729)
14 4hg6_A Cellulose synthase subu 25.1 56 0.0019 33.8 4.2 200 15-233 138-369 (802)
15 1o7q_A N-acetyllactosaminide a 23.1 1.3E+02 0.0045 28.4 5.9 88 18-106 50-151 (289)
16 1omz_A Alpha-1,4-N-acetylhexos 22.2 42 0.0014 31.5 2.4 104 16-121 27-134 (293)
No 1
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=88.31 E-value=1 Score=37.99 Aligned_cols=119 Identities=8% Similarity=-0.073 Sum_probs=67.4
Q ss_pred ccccEEEEeccccccCCCChHHHHHHHHHh-CCccccccc-----CCCCCceeccccccccCcccceeeeeccCCCCCCC
Q 021149 92 AEYNYIFLWDEDIGVENFNPRRYLSIVKDE-GLEISQPAL-----DPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDD 165 (316)
Q Consensus 92 ~~YdYIflwDDDL~vd~f~i~ry~~Ivr~~-gLeISQPAL-----d~~s~~ish~iT~r~~~~~vHr~~~~~~~~~~C~~ 165 (316)
+..|||++.|+|..++...+.++++.+.+. +..+..+.. +.+ +...+.. . .+...+. .
T Consensus 87 a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~-~-~~~~~~~----------~--- 150 (255)
T 1qg8_A 87 AEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNEN-RDIVKET-V-RPAAQVT----------W--- 150 (255)
T ss_dssp CCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC----CEEEEE-E-ECCCSCB----------S---
T ss_pred cCCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEEEeCCC-Ccchhhc-c-CchHHHH----------H---
Confidence 578999999999999998999999999876 666666553 221 1111110 0 0000000 0
Q ss_pred CCCCCCccceEEEeccccchHHHHHHh-hh--ccC-CCcccchhhhhhhhhhcCCCCCcEEEEeeceEEecc
Q 021149 166 YSTAPPCIGWVEMMAPVFSRAAWRCAW-YM--IQN-DLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLG 233 (316)
Q Consensus 166 ~~~~ppcTgFVEiMaPVFSR~Awrcvw-~m--iqn-dlvhGWGLD~~w~~c~~g~~~~kiGVVDa~~V~H~~ 233 (316)
....++-..+=+|+|++++.+- .+ ..+ +.....+-|+.+...+.. .+ ++..++...+.|+.
T Consensus 151 -----~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~~~~~~eD~~~~~r~~~-~g-~~~~~~~~~~~~r~ 215 (255)
T 1qg8_A 151 -----NAPCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNH-FY-PFYPLDEELDLNYI 215 (255)
T ss_dssp -----CCTTTSCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTT-TC-CBEEEEEEEEEEEE
T ss_pred -----hhcCCCccceEEEEHHHHHhhcccccccccCCcccchHHHHHHHHHHHH-hC-CEEEecCcEEEEEE
Confidence 0011111234478999998863 22 011 222334567766544432 23 69999998888775
No 2
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=82.21 E-value=2.5 Score=39.96 Aligned_cols=137 Identities=15% Similarity=0.075 Sum_probs=70.6
Q ss_pred ccccEEEEeccccccCCCChHHHHHHHHHhCCcccccccC---CCCCceecc----ccccccCcccceeeeeccC---CC
Q 021149 92 AEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALD---PVKSEVHHP----ITARRRNSKAHRRMYKYKG---SG 161 (316)
Q Consensus 92 ~~YdYIflwDDDL~vd~f~i~ry~~Ivr~~gLeISQPALd---~~s~~ish~----iT~r~~~~~vHr~~~~~~~---~~ 161 (316)
+..|||++.|+|..++..-++++++.+++..-.+.-|.++ .+. +.+. .+...-...++........ ..
T Consensus 113 A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (472)
T 1xhb_A 113 SRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPIIDVISDDT--FEYMAGSDMTYGGFNWKLNFRWYPVPQREMDR 190 (472)
T ss_dssp CCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECSSS--CCEECCCTTEEEEECTTCCEEEEECCHHHHHH
T ss_pred ccCCeEEEECCCeEeCccHHHHHHHHHHhCCCEEEEeeeeeEcCCC--ceeccCCCcccceeeccceeecccCCHHHHhc
Confidence 5689999999999999999999999998877656666542 111 1110 0000000000000000000 00
Q ss_pred CCCCCCCCCCccceEEEeccccchHHHHHHhhhccCCCcccch---hhhhhhhhhcCCCCCcEEEEeeceEEeccCCC
Q 021149 162 RCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWG---LDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPT 236 (316)
Q Consensus 162 ~C~~~~~~ppcTgFVEiMaPVFSR~Awrcvw~miqndlvhGWG---LD~~w~~c~~g~~~~kiGVVDa~~V~H~~~pt 236 (316)
+- .....+-.+.++-..+=+|+|++|..+= -++.....|| +|+.+.-... +.+|.++....|.|....+
T Consensus 191 ~~-~~~~~~~~~~~~~g~~~~irr~~~~~iG--gfde~~~~~g~ED~dl~~R~~~~---G~~i~~~p~~~v~H~~~~~ 262 (472)
T 1xhb_A 191 RK-GDRTLPVRTPTMAGGLFSIDRDYFQEIG--TYDAGMDIWGGENLEISFRIWQC---GGTLEIVTCSHVGHVFRKA 262 (472)
T ss_dssp TT-TCTTSCEECSBCCSSSEEEEHHHHHHTT--SCCTTSCTTCCCCSHHHHHHHHT---TCEEEEEEEEEEEEEC---
T ss_pred cc-CCCCCcccCccccceeEEEEHHHHHHcC--CCCCcccccCchhHHHHHHHHhc---CCeEEEccCcEEEEEccCc
Confidence 00 0000111111111122357999999873 2345555664 3444443333 4689999999999987543
No 3
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=81.87 E-value=4.8 Score=39.33 Aligned_cols=216 Identities=13% Similarity=0.122 Sum_probs=99.6
Q ss_pred CCcEEEEEecccchhhHHHHhh----cCCCCCcEEEEEEecCccCccccc-c-ccC-ceeEEEeeccchhhhhhhccCcc
Q 021149 17 PMNLLAIAAGIKQKKIVDQIVR----KFPSKDFVVMLFHYDGVVDEWKDL-V-WAD-RAIHVSAANQTKWWFAKRFLHPD 89 (316)
Q Consensus 17 ~k~Lva~~vG~kqk~~vd~~v~----kf~~~nF~v~LfhYDg~v~~w~d~-e-ws~-~aiHv~a~kqtKWw~akRfLhPd 89 (316)
++.-|++|+=.. ...+...+. .-...++.|+++. ||+.|+=.++ + +.+ ..+++........-.+...-.-=
T Consensus 93 p~vsviIp~~n~-~~~l~~~l~sl~~q~~~~~~eiivvD-d~s~d~t~~~~~~~~~~~~i~~i~~~~~~~g~~~a~N~g~ 170 (625)
T 2z86_A 93 DGLSIVIPTYNR-AKILAITLACLCNQKTIYDYEVIVAD-DGSKENIEEIVREFESLLNIKYVRQKDYGYQLCAVRNLGL 170 (625)
T ss_dssp CCEEEEEEESSC-HHHHHHHHHHHHTCCCSSCEEEEEEE-ESCSSCHHHHHHTTTTTSCEEEEEECCCSCCHHHHHHHHH
T ss_pred CcEEEEEecCCc-HHHHHHHHHHHHhhccCCCeEEEEEe-CCCchhHHHHHHHhhhcCCeEEEEeCCCCcchhHHHHHHH
Confidence 345566776433 344444443 3222478887776 7776653221 1 111 12333333221111111000111
Q ss_pred ccccccEEEEeccccccCCCChHHHHHHHHHhC-CcccccccCCCCCceecc------ccccc-cC----cccceeeeec
Q 021149 90 IVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEG-LEISQPALDPVKSEVHHP------ITARR-RN----SKAHRRMYKY 157 (316)
Q Consensus 90 iv~~YdYIflwDDDL~vd~f~i~ry~~Ivr~~g-LeISQPALd~~s~~ish~------iT~r~-~~----~~vHr~~~~~ 157 (316)
-.+..|||++.|+|..++...+.++++.+.+.. .-+.+|..-......... -..+. +. ..+.......
T Consensus 171 ~~a~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (625)
T 2z86_A 171 RAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQVAGKVEQN 250 (625)
T ss_dssp HHCCSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECCEEEECCTTCCHHHHHHSTTGGGTSCC--------------
T ss_pred HhCCcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEeeeeccCcccchhhcccchHHhhhcchhccCCchhhhhccC
Confidence 135789999999999999999999999998643 444444321111000000 00000 00 0000000000
Q ss_pred cCCCC------CC-CCCCCCCccceEEEeccccchHHHHHHhhhccCCCcccch-hhhhhhhhhcCCCCCcEEEEeeceE
Q 021149 158 KGSGR------CD-DYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWG-LDIQLGYCAQGDRTKNVGVVDSEYI 229 (316)
Q Consensus 158 ~~~~~------C~-~~~~~ppcTgFVEiMaPVFSR~Awrcvw~miqndlvhGWG-LD~~w~~c~~g~~~~kiGVVDa~~V 229 (316)
.+..+ .. .....+....++=..+=+|+|+++..+= . ++....+|| =|+-+..-+. ..+.++.++....+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~l~~iG-g-fde~~~~~g~ED~dl~~Rl~-~~G~~i~~~p~~~v 327 (625)
T 2z86_A 251 KSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAG-W-FDEEFTHWGGEDNEFGYRLY-REGCYFRSVEGAMA 327 (625)
T ss_dssp -CCCTHHHHHHHTTTTTTCSCGGGGCCTTEEEEETHHHHHHC-C-CCTTCSSCCCHHHHHHHHHH-HTTCEEEECGGGCE
T ss_pred CccccchhhhcccccccccCCceeEEeeceeeeEHHHHHHhC-C-CccccccCCcchhhhhhhHH-hCCceEEEcccchh
Confidence 00000 00 0000001112233345578999999873 2 345455664 5655543332 13469999999999
Q ss_pred EeccCCCC
Q 021149 230 VHLGLPTL 237 (316)
Q Consensus 230 ~H~~~ptl 237 (316)
.|...++.
T Consensus 328 ~H~~~~~~ 335 (625)
T 2z86_A 328 YHQEPPGK 335 (625)
T ss_dssp EEECCC--
T ss_pred hccCCccc
Confidence 99976543
No 4
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=78.08 E-value=2.8 Score=40.20 Aligned_cols=109 Identities=14% Similarity=0.134 Sum_probs=63.5
Q ss_pred CCCcEEEEEecccch----hhHHHHhhcCCCCC--cEEEEEEecCccCccc--cccccCceeEEEee--ccchhhhhhhc
Q 021149 16 PPMNLLAIAAGIKQK----KIVDQIVRKFPSKD--FVVMLFHYDGVVDEWK--DLVWADRAIHVSAA--NQTKWWFAKRF 85 (316)
Q Consensus 16 ~~k~Lva~~vG~kqk----~~vd~~v~kf~~~n--F~v~LfhYDg~v~~w~--d~ews~~aiHv~a~--kqtKWw~akRf 85 (316)
.++.-|++|+=.... ..+++++..-. .+ +.|+|.. ||+.|+=- .++-.. -+++... +..+ +...
T Consensus 65 ~p~vSVIIp~yN~~~~~L~~~l~Sl~~q~~-~~~~~EIIvVD-DgS~D~t~~~~~~~~~-~v~vi~~~~n~G~---~~A~ 138 (501)
T 2ffu_A 65 LPATSVVITFHNEARSALLRTVVSVLKKSP-PHLIKEIILVD-DYSNDPEDGALLGKIE-KVRVLRNDRREGL---MRSR 138 (501)
T ss_dssp CCCEEEEEEESSCCHHHHHHHHHHHHHHSC-GGGEEEEEEEE-CSCSCTHHHHGGGGBT-TEEEEECSSCCHH---HHHH
T ss_pred CCCEEEEEEeCcCcHHHHHHHHHHHHhhCc-hhhceeEEEEE-CCCCchHHHHHHhcCC-CEEEEECCCCcCH---HHHH
Confidence 445667777755433 23556665532 33 4666554 77766421 111111 2333221 1221 1111
Q ss_pred cCccccccccEEEEeccccccCCCChHHHHHHHHHhCCccccccc
Q 021149 86 LHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPAL 130 (316)
Q Consensus 86 LhPdiv~~YdYIflwDDDL~vd~f~i~ry~~Ivr~~gLeISQPAL 130 (316)
..-=-.+..|||++.|+|..++...+.++++.+++..-.+..|.+
T Consensus 139 N~G~~~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~vv~~~~ 183 (501)
T 2ffu_A 139 VRGADAAQAKVLTFLDSHCECNEHWLEPLLERVAEDRTRVVSPII 183 (501)
T ss_dssp HHHHHHCCSSEEEECCSSEEECTTCHHHHHHHHHHCTTEEEEEEE
T ss_pred HHHHHhcCCCEEEEECCCcccCccHHHHHHHHHHhCCCeEEEeee
Confidence 111123578999999999999999999999999988777777764
No 5
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=65.79 E-value=4.2 Score=33.77 Aligned_cols=108 Identities=16% Similarity=0.069 Sum_probs=59.7
Q ss_pred CCCcEEEEEecccchhhH----HHHhhcCCCCCcEEEEEEecCccCccccc--ccc--CceeEEEe-eccchhhhhhhcc
Q 021149 16 PPMNLLAIAAGIKQKKIV----DQIVRKFPSKDFVVMLFHYDGVVDEWKDL--VWA--DRAIHVSA-ANQTKWWFAKRFL 86 (316)
Q Consensus 16 ~~k~Lva~~vG~kqk~~v----d~~v~kf~~~nF~v~LfhYDg~v~~w~d~--ews--~~aiHv~a-~kqtKWw~akRfL 86 (316)
.++.-|++|+=.. ...+ +.++.+- ..+|.|++.. ||+.|+=.++ ++. ..-|.+.. .+..+=- +...
T Consensus 4 ~p~vsViIp~yn~-~~~l~~~l~Sl~~q~-~~~~eiIvvD-d~S~d~t~~~~~~~~~~~~~i~~i~~~n~G~~~-a~N~- 78 (240)
T 3bcv_A 4 IPKVSVIVPIYNV-EKYLDQCVQALLAQT-LSDIEIILID-DESPDNCPKICDDYAAQYPNIKVIHKKNAGLGM-ACNS- 78 (240)
T ss_dssp CCSEEEEEEESSC-TTTHHHHHHHHHTCS-SSSEEEEEEE-CCCSSSHHHHHHHHHHHCSSEEEEECCCCCHHH-HHHH-
T ss_pred CCcEEEEEecCCC-HHHHHHHHHHHHhCc-CCCeEEEEEE-CCCCcCHHHHHHHHHhhCCCEEEEECCCCChHH-HHHH-
Confidence 3456677777433 3444 4444332 2477877664 7776642211 111 01133322 2222111 1110
Q ss_pred CccccccccEEEEeccccccCCCChHHHHHHHHHhCCcccccc
Q 021149 87 HPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPA 129 (316)
Q Consensus 87 hPdiv~~YdYIflwDDDL~vd~f~i~ry~~Ivr~~gLeISQPA 129 (316)
-=-.+..|||++.|+|..++...++++++.+++.+.++...+
T Consensus 79 -g~~~a~g~~i~~lD~Dd~~~~~~l~~l~~~~~~~~~~~v~~~ 120 (240)
T 3bcv_A 79 -GLDVATGEYVAFCDSDDYVDSDMYMTMYNVAQKYTCDAVFTG 120 (240)
T ss_dssp -HHHHCCSSEEEECCTTCCCCTTHHHHHHHHHHHHTCSEEEC-
T ss_pred -HHHHcCCCEEEEECCCCcCCHHHHHHHHHHHHhcCCCEEEEe
Confidence 011246799999999999999999999999998777766544
No 6
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=64.79 E-value=8.6 Score=36.59 Aligned_cols=197 Identities=10% Similarity=0.015 Sum_probs=97.8
Q ss_pred CCCcEEEEEecccchhhHHHHhhcCC------CCCcEEEEEEecCccCccccc--cccCceeEEE------eeccchhhh
Q 021149 16 PPMNLLAIAAGIKQKKIVDQIVRKFP------SKDFVVMLFHYDGVVDEWKDL--VWADRAIHVS------AANQTKWWF 81 (316)
Q Consensus 16 ~~k~Lva~~vG~kqk~~vd~~v~kf~------~~nF~v~LfhYDg~v~~w~d~--ews~~aiHv~------a~kqtKWw~ 81 (316)
.++..|++|+=.. ..++..+|+... ..+|.|++.. ||+.|+=.++ +...+.++.. ..+..|-.-
T Consensus 93 ~p~vSVVIP~yNe-~~~l~~~l~sl~~~l~~~~~~~EIIVVD-DgStD~T~~i~~~~~~~v~~~~~~~i~~~~n~G~g~A 170 (387)
T 3f1y_A 93 GLTVSAVLPSRNV-ADTVGGIIDEIHALNERAPLIDQILVVD-ADSEDGTAGVAASHGAEVYSENELMSGYGDAHGKGDA 170 (387)
T ss_dssp TCCEEEEEEESSC-TTTHHHHHHHHHHHHHHSCCCSEEEEEE-CSCSSSHHHHHHHTTCEEEEGGGTTGGGCSCCSHHHH
T ss_pred CCeEEEEEEcCCC-HHHHHHHHHHHHHHHhcCCCCeEEEEEc-CcCCccHHHHHHHhCchhcccceeEecCCccCCHHHH
Confidence 4667888888554 445544444331 2467776655 8887764332 1111211100 013333221
Q ss_pred hhhccCccccccccEEEEeccccc-cCCCChHHHHHHHHHh-CCcccccccCCCCCceeccccccccCcccce----eee
Q 021149 82 AKRFLHPDIVAEYNYIFLWDEDIG-VENFNPRRYLSIVKDE-GLEISQPALDPVKSEVHHPITARRRNSKAHR----RMY 155 (316)
Q Consensus 82 akRfLhPdiv~~YdYIflwDDDL~-vd~f~i~ry~~Ivr~~-gLeISQPALd~~s~~ish~iT~r~~~~~vHr----~~~ 155 (316)
.+.-+ -.+.+|||++.|.|.. ++...+.++++.+.+. +..+.......... ...... +.....+-+ ..+
T Consensus 171 ~n~G~---~~A~gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~~~~~~~-~~~~~~-~~~~g~v~~~~~~~l~ 245 (387)
T 3f1y_A 171 MWRAL---SVTRGDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAAYRRPFR-KGESIE-EDGGGRVTELTAKPLF 245 (387)
T ss_dssp HHHHT---TTCCSSEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEEEECC--------C-CBCCSHHHHHTHHHHH
T ss_pred HHHHH---HhcCCCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEeeccccc-cccccc-cccCCchhhhhHHHHH
Confidence 11111 1257999999999999 8999999999988765 56666554321100 000000 000000000 000
Q ss_pred eccCCCCCCCCCCCCCccceEEEeccccchHHHHHHhhhccCCCcccchhhhhhh-hhhcCCCCCcEEEEeeceEEecc
Q 021149 156 KYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLG-YCAQGDRTKNVGVVDSEYIVHLG 233 (316)
Q Consensus 156 ~~~~~~~C~~~~~~ppcTgFVEiMaPVFSR~Awrcvw~miqndlvhGWGLD~~w~-~c~~g~~~~kiGVVDa~~V~H~~ 233 (316)
+.--+.-+ ...-+.+||. +|+|++++.+ .+ ..|||.|..+- +++.-..-++|.=|+-.+..|..
T Consensus 246 ~~~~~~l~---~~~d~~sG~~-----a~rR~~l~~i-~f-----~~gyg~e~ell~~~~~~~G~~~I~eVpi~~~~h~~ 310 (387)
T 3f1y_A 246 NLFYPELA---GFVQPLAGEF-----VADRELFCSI-PF-----LTGYAVETGIMIDVLKKVGLGAMAQVDLGERQNRH 310 (387)
T ss_dssp HHHCGGGT---TCSCTTCSCE-----EEEHHHHTTS-CE-----ECSTTHHHHHHHHHHHHHCGGGEEEEEEEECCCCC
T ss_pred HHHhHhhc---cccccccccE-----EEEHHHHHhC-CC-----CCCcchHHHHHHHHHHhcCCCeEEEEecceeecCC
Confidence 00000000 0011234442 6899999876 22 37899888773 33221112348888877776654
No 7
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=63.48 E-value=14 Score=37.62 Aligned_cols=37 Identities=19% Similarity=0.200 Sum_probs=31.0
Q ss_pred cccEEEEeccccccCCCChHHHHHHHHHh-CCcccccc
Q 021149 93 EYNYIFLWDEDIGVENFNPRRYLSIVKDE-GLEISQPA 129 (316)
Q Consensus 93 ~YdYIflwDDDL~vd~f~i~ry~~Ivr~~-gLeISQPA 129 (316)
.+|||+|.|+|..++...+.++++.++.. ...+..|.
T Consensus 268 ~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~ 305 (657)
T 4fix_A 268 DCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQ 305 (657)
T ss_dssp CCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEE
T ss_pred CCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeE
Confidence 68999999999999999999999999876 34455554
No 8
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=62.98 E-value=23 Score=34.91 Aligned_cols=210 Identities=10% Similarity=0.019 Sum_probs=101.0
Q ss_pred CCCcEEEEEecccc----hhhHHHHhhcCCCCC--cEEEEEEecCccCcc-cc-cc-cc--CceeEEEee--ccchhhhh
Q 021149 16 PPMNLLAIAAGIKQ----KKIVDQIVRKFPSKD--FVVMLFHYDGVVDEW-KD-LV-WA--DRAIHVSAA--NQTKWWFA 82 (316)
Q Consensus 16 ~~k~Lva~~vG~kq----k~~vd~~v~kf~~~n--F~v~LfhYDg~v~~w-~d-~e-ws--~~aiHv~a~--kqtKWw~a 82 (316)
.++.-|++|+=... ...+++++..- ..+ |.|+|+ =||+.|+= .+ ++ +. ..-|++... +..+ +
T Consensus 111 ~P~vSVIIp~yNe~~~~L~~~L~Sll~qt-~~~~~~EIIVV-DDgS~D~tl~~~l~~~~~~~~~v~vi~~~~n~G~---~ 185 (570)
T 2d7i_A 111 LPNTSIIIPFHNEGWSSLLRTVHSVLNRS-PPELVAEIVLV-DDFSDREHLKKPLEDYMALFPSVRILRTKKREGL---I 185 (570)
T ss_dssp CCCEEEEEEESSCCHHHHHHHHHHHHHHS-CGGGEEEEEEE-ECSCCCGGGTHHHHHHHTTSTTEEEEECSSCCCH---H
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHhcC-CccCcEEEEEE-ECCCCcHHHHHHHHHHHHhCCeEEEEECCCCCCH---H
Confidence 45677778875544 23455565543 233 366655 47776654 21 11 11 112444332 2221 1
Q ss_pred hhccCccccccccEEEEeccccccCCCChHHHHHHHHHhCCcccccccCCCCC-ceecccc----cccc-Ccccceeeee
Q 021149 83 KRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKS-EVHHPIT----ARRR-NSKAHRRMYK 156 (316)
Q Consensus 83 kRfLhPdiv~~YdYIflwDDDL~vd~f~i~ry~~Ivr~~gLeISQPALd~~s~-~ish~iT----~r~~-~~~vHr~~~~ 156 (316)
.-...-=-.+.-|||+|.|+|..++..-++++++.+++..--+..|.++.-.. .+.+... .+.. ...+.....
T Consensus 186 ~A~N~G~~~A~gd~i~fLD~D~~~~p~~L~~ll~~l~~~~~~vv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 264 (570)
T 2d7i_A 186 RTRMLGASVATGDVITFLDSHCEANVNWLPPLLDRIARNRKTIVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYKRI- 264 (570)
T ss_dssp HHHHHHHHHCCSSEEEECCSSEEECTTCSHHHHHHHHHCTTEEEEEEEEEECTTTCCEECCTTSSCEEEECTTCCEEEE-
T ss_pred HHHHHHHHhcCCCEEEEEcCCccccccHHHHHHHHHHhCCCEEEeeeeeccCCCchhhccccCCccccccccccccccc-
Confidence 11111112356799999999999999999999999987654455554321000 0111100 0000 000000000
Q ss_pred ccCCC-CCCCCCCCCCccceEEEeccccchHHHHHHhhhccCCCcccc-hhhhhhhhhhcCCCCCcEEEEeeceEEeccC
Q 021149 157 YKGSG-RCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAW-GLDIQLGYCAQGDRTKNVGVVDSEYIVHLGL 234 (316)
Q Consensus 157 ~~~~~-~C~~~~~~ppcTgFVEiMaPVFSR~Awrcvw~miqndlvhGW-GLD~~w~~c~~g~~~~kiGVVDa~~V~H~~~ 234 (316)
..... .- .....+-.+.++-.-+=+|+|++|..+= .+++....| |=|+-+..-+. ..+.+|.++....|.|...
T Consensus 265 ~~~~~~~~-~~~~~~~~~~~~~g~~~~irr~~~~~iG--gfDe~~~~~g~ED~dl~~Rl~-~~G~~i~~~p~~~v~H~~r 340 (570)
T 2d7i_A 265 PIPPELQK-ADPSDPFESPVMAGGLFAVDRKWFWELG--GYDPGLEIWGGEQYEISFKVW-MCGGRMEDIPCSRVGHIYR 340 (570)
T ss_dssp CCCTTTCC-SSTTSCEECSSCCSSSEEEEHHHHHHTT--SSCTTCCSSSSHHHHHHHHHH-HTTCEEEEEEEEEEEECCC
T ss_pred ccchhhhc-cCCCcceecccccceEEEEEHHHHHhcC--CCCCcccccCcchHHHHHHHH-hCCCeEEEccCeEEEEEcc
Confidence 00000 00 0001111111222223468899999873 245556667 44555532221 1246899999999999754
Q ss_pred C
Q 021149 235 P 235 (316)
Q Consensus 235 p 235 (316)
.
T Consensus 341 ~ 341 (570)
T 2d7i_A 341 K 341 (570)
T ss_dssp S
T ss_pred c
Confidence 3
No 9
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=36.48 E-value=12 Score=33.88 Aligned_cols=38 Identities=24% Similarity=0.483 Sum_probs=28.2
Q ss_pred hhhccCccccccccEEEEeccc---cccCCCChHHHHHHHHHhCCccc
Q 021149 82 AKRFLHPDIVAEYNYIFLWDED---IGVENFNPRRYLSIVKDEGLEIS 126 (316)
Q Consensus 82 akRfLhPdiv~~YdYIflwDDD---L~vd~f~i~ry~~Ivr~~gLeIS 126 (316)
+.+||- -..|||+++.|-| ++.+..++-|++ +.|.+|.
T Consensus 45 v~~Fl~---~~~~dhllfIDAD~~~I~FdPe~V~rLl----~~g~DVV 85 (203)
T 2c0n_A 45 LDMFLE---MKDYDTLAFLDEDVVPIEIDFQKVEAKF----NEGYDVV 85 (203)
T ss_dssp HHHHHH---CTTCCEEEEECTTEEEEECCHHHHHHHH----HHTCSEE
T ss_pred HHHHHh---cCCCCEEEEEeCCCCccccCHHHHHHHH----hCCCCEE
Confidence 455552 2369999999999 988888888888 5566654
No 10
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=35.77 E-value=22 Score=34.25 Aligned_cols=182 Identities=11% Similarity=0.067 Sum_probs=96.9
Q ss_pred cEEEEEecccchhhHHHHhhcCC----CCCcEEEEEEecCccCccccc-c-----c----cCceeEEEee-----ccch-
Q 021149 19 NLLAIAAGIKQKKIVDQIVRKFP----SKDFVVMLFHYDGVVDEWKDL-V-----W----ADRAIHVSAA-----NQTK- 78 (316)
Q Consensus 19 ~Lva~~vG~kqk~~vd~~v~kf~----~~nF~v~LfhYDg~v~~w~d~-e-----w----s~~aiHv~a~-----kqtK- 78 (316)
+||++|+ .+ +++..++.... ..++.|++.. ||++|+=.+. + . ..+.+..... +..|
T Consensus 2 slVIiP~-~e--E~I~~vl~~l~~~~~~~~~EIIVVD-DGStD~T~eia~~la~~~~~~~g~~vi~~~~~r~~~~n~GkG 77 (397)
T 2bo4_A 2 SLVVFPF-KH--EHPEVLLHNVRVAAAHPRVHEVLCI-GYERDQTYEAVERAAPEISRATGTPVSVRLQERLGTLRPGKG 77 (397)
T ss_dssp CEEEEEC-CS--SCHHHHHHHHHHHHHSTTCCEEEEE-ESSCCHHHHHHHHHHHHHHHHHSCCEEEEECCCCSSSSSSHH
T ss_pred cEEEEeC-Cc--cCHHHHHHHHHHhccCCCeEEEEEE-CcCCccHHHHHHHhhhhcccccCCeEEEEecccCCCCCCCHH
Confidence 6888887 32 46666665431 2467775554 8888863322 1 1 1123333222 4555
Q ss_pred ---hhhhhhccCccccccccEEEEeccccc-cCCCChHHHHHHHHHhCCcccccccCC--CCCceeccccccccCcccce
Q 021149 79 ---WWFAKRFLHPDIVAEYNYIFLWDEDIG-VENFNPRRYLSIVKDEGLEISQPALDP--VKSEVHHPITARRRNSKAHR 152 (316)
Q Consensus 79 ---Ww~akRfLhPdiv~~YdYIflwDDDL~-vd~f~i~ry~~Ivr~~gLeISQPALd~--~s~~ish~iT~r~~~~~vHr 152 (316)
+-.++.-+ -.+.+|||.+.|-|+. .+...+.++++.+.+ |.++.-+.... ..+.+.+.+. |. +-+
T Consensus 78 ~Al~~G~~~Al---~~a~gd~vv~mDADlq~~~P~~i~~Ll~~l~~-g~D~V~g~~~r~~~~~~~~~~~~-~~----ll~ 148 (397)
T 2bo4_A 78 DGMNTALRYFL---EETQWERIHFYDADITSFGPDWITKAEEAADF-GYGLVRHYFPRASTDAMITWMIT-RT----GFA 148 (397)
T ss_dssp HHHHHHHHHHH---HHCCCSEEEECCTTCSSCCHHHHHHHHHHHHT-TCSEEEEECCCCTTSCHHHHHTH-HH----HHH
T ss_pred HHHHHHHHHHH---HhCCCCEEEEEcCCCCCCCHHHHHHHHHHHHc-CCCEEEEEeccccCCcHHHHHHH-HH----HHH
Confidence 22221100 1357999999999996 899999999988754 66766654221 1111211110 10 000
Q ss_pred eeeeccCCCCCCCCCCCCCccceEEEeccccchHHHHHHhhh-ccCCCcccchhhhhhhhhhcCCCCCcEEEEe
Q 021149 153 RMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYM-IQNDLIHAWGLDIQLGYCAQGDRTKNVGVVD 225 (316)
Q Consensus 153 ~~~~~~~~~~C~~~~~~ppcTgFVEiMaPVFSR~Awrcvw~m-iqndlvhGWGLD~~w~~c~~g~~~~kiGVVD 225 (316)
..|+ -..|. ....| -+||. +|+|++++.+... +.. ..+|||.|..+...+.. .+.+|.-|.
T Consensus 149 ~~~~---~~~~~-~i~dp-~sG~~-----a~~R~vl~~l~~~~~~~-~~~~fg~eiel~~~a~~-~G~rI~EVp 210 (397)
T 2bo4_A 149 LLWP---HTELS-WIEQP-LGGEL-----LMRREVAAMLYEDERVR-RRSDWGIDTLYTFVTVQ-QGVSIYECY 210 (397)
T ss_dssp HHCT---TSSGG-GCSCT-TCCCE-----EEEHHHHHHHHHCHHHH-TCCSTTHHHHHHHHHHH-TTCCEEEEE
T ss_pred HHHH---Hhhcc-ccccC-CcccE-----EEeHHHHHHHhhhcccC-cCCCcchHHHHHHHHHH-cCCEEEEEE
Confidence 0110 01111 11222 34555 5999999876321 112 56899999988766542 346787765
No 11
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=29.43 E-value=31 Score=29.74 Aligned_cols=29 Identities=10% Similarity=0.273 Sum_probs=26.5
Q ss_pred ccccEEEEeccccccCCCChHHHHHHHHH
Q 021149 92 AEYNYIFLWDEDIGVENFNPRRYLSIVKD 120 (316)
Q Consensus 92 ~~YdYIflwDDDL~vd~f~i~ry~~Ivr~ 120 (316)
+.-|||+|.|.|..++...++++++.+++
T Consensus 73 A~g~yl~fln~D~~~~~~~l~~l~~~~~~ 101 (249)
T 2nxv_A 73 CKGRYVIFCHEDVELVDRGYDDLVAAIEA 101 (249)
T ss_dssp CCSSEEEEEETTEECSSCCHHHHHHHHHH
T ss_pred cCCCEEEEECCCcccCccHHHHHHHHHHh
Confidence 46799999999999999999999999887
No 12
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=28.12 E-value=65 Score=31.33 Aligned_cols=107 Identities=19% Similarity=0.084 Sum_probs=55.0
Q ss_pred CCcEEEEEecccchhhHHHHhhcC---CCCCcEEEEEEecCccCcccc-c-ccc--CceeEE-EeeccchhhhhhhccCc
Q 021149 17 PMNLLAIAAGIKQKKIVDQIVRKF---PSKDFVVMLFHYDGVVDEWKD-L-VWA--DRAIHV-SAANQTKWWFAKRFLHP 88 (316)
Q Consensus 17 ~k~Lva~~vG~kqk~~vd~~v~kf---~~~nF~v~LfhYDg~v~~w~d-~-ews--~~aiHv-~a~kqtKWw~akRfLhP 88 (316)
++.-|++++= +....+...++.. .-.+|.|++.. ||+.|+=.+ + ++. ..-+++ ...+..+-.-.+.-+
T Consensus 375 ~~vsiii~~y-n~~~~l~~~l~s~~~q~~~~~eiivvd-d~S~d~t~~~~~~~~~~~~~i~~~~~~n~G~~~a~n~g~-- 450 (625)
T 2z86_A 375 PLVSIYIPAY-NCSKYIVRCVESALNQTITDLEVCICD-DGSTDDTLRILQEHYANHPRVRFISQKNKGIGSASNTAV-- 450 (625)
T ss_dssp CSEEEEEEES-SCTTTHHHHHHHHHSSSCCSEEEEEEE-ESCSSSHHHHHHHHHTTCTTEEEEEECCCCHHHHHHHHH--
T ss_pred CeEEEEEeCC-CCHHHHHHHHHHHHhCcCCCeEEEEEE-CcCChhHHHHHHHHHhhCCcEEEEeCCCCCHHHHHHHHH--
Confidence 3455666663 3344444443322 12577877765 566654211 1 110 112333 222333221111111
Q ss_pred cccccccEEEEeccccccCCCChHHHHHHHHH-hCCccccc
Q 021149 89 DIVAEYNYIFLWDEDIGVENFNPRRYLSIVKD-EGLEISQP 128 (316)
Q Consensus 89 div~~YdYIflwDDDL~vd~f~i~ry~~Ivr~-~gLeISQP 128 (316)
-.+..|||++.|+|..++...++++++.+.+ .+..+..+
T Consensus 451 -~~a~g~~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~ 490 (625)
T 2z86_A 451 -RLCRGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYT 490 (625)
T ss_dssp -HHCCSSEEEECCTTCEECTTHHHHHHHHHHHCTTCSEEEE
T ss_pred -HhcCCCEEEEECCCcccChhHHHHHHHHHHhCCCeeEEEe
Confidence 1257899999999999988888888877754 34444443
No 13
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=25.97 E-value=14 Score=37.24 Aligned_cols=37 Identities=19% Similarity=0.251 Sum_probs=0.0
Q ss_pred cccccEEEEeccccccCCCChHHHHHHHHHhCCcccc
Q 021149 91 VAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQ 127 (316)
Q Consensus 91 v~~YdYIflwDDDL~vd~f~i~ry~~Ivr~~gLeISQ 127 (316)
.+..|||++.|+|-.++...++++++.+...++-++.
T Consensus 81 ~A~gdyI~flD~Dd~~~p~~l~~l~~~l~~~d~v~~~ 117 (729)
T 3l7i_A 81 EVETPYFMFLDADDELASYAITFYLEKFNNTDGLIAP 117 (729)
T ss_dssp -------------------------------------
T ss_pred hccCCEEEEECCCCCCChhHHHHHHHHhcCCCEEEEe
Confidence 3578999999999999988888988888744444443
No 14
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=25.08 E-value=56 Score=33.77 Aligned_cols=200 Identities=14% Similarity=0.063 Sum_probs=98.2
Q ss_pred CCCCcEEEEEecccchh----hHHHHhh-cCCCCCcEEEEEEecCccCcc-------------------ccccccCceeE
Q 021149 15 RPPMNLLAIAAGIKQKK----IVDQIVR-KFPSKDFVVMLFHYDGVVDEW-------------------KDLVWADRAIH 70 (316)
Q Consensus 15 ~~~k~Lva~~vG~kqk~----~vd~~v~-kf~~~nF~v~LfhYDg~v~~w-------------------~d~ews~~aiH 70 (316)
..++.-|++|+=..... .++++.+ .++.+++.|++.. ||+.|+= .++.=..+...
T Consensus 138 ~~P~VSViIPtyNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVD-DgStD~T~~~~d~~i~~~~~~~~~~l~~~~~~~~v~~ 216 (802)
T 4hg6_A 138 ELPTVDILVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCD-DGGTDQRCMSPDPELAQKAQERRRELQQLCRELGVVY 216 (802)
T ss_dssp TCCCEEEEEECTTCCHHHHHHHHHHHHTSSCCTTCCEEEEES-TTCHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHTCEE
T ss_pred CCCcEEEEEEECCCCHHHHHHHHHHHHhccCCCCcEEEEEEE-CCCCccccccCCHHHHHHHHhhhHHHHHHHHhcCcEE
Confidence 34567788888444333 3445544 3444558887764 6654432 11100011222
Q ss_pred EEee--ccchhhhhhhccCccccccccEEEEeccccccCCCChHHHHHHHH-HhCCcccccccCCCCCc-eeccccc--c
Q 021149 71 VSAA--NQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVK-DEGLEISQPALDPVKSE-VHHPITA--R 144 (316)
Q Consensus 71 v~a~--kqtKWw~akRfLhPdiv~~YdYIflwDDDL~vd~f~i~ry~~Ivr-~~gLeISQPALd~~s~~-ish~iT~--r 144 (316)
+... ++.|=.-.+..+ -.+.+|||++.|+|..++...+.++++.+. ..+..+.|......... +...... +
T Consensus 217 i~~~~~~~GKa~alN~gl---~~a~gd~Il~lDaD~~~~pd~L~~lv~~~~~dp~v~~V~~~~~~~~~~~~~~~~~~~~~ 293 (802)
T 4hg6_A 217 STRERNEHAKAGNMSAAL---ERLKGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDPIQRNLALGDR 293 (802)
T ss_dssp EECSSCCSHHHHHHHHHH---HHCCCSEEEECCTTEEECTTHHHHHHHHHHHSSSCCEEECCCCBSSCCHHHHHHTCCTT
T ss_pred EEecCCCCcchHHHHHHH---HhcCCCEEEEECCCCCcChHHHHHHHHHHhcCCCeEEEeccEEEeCCchHhhhhhHHhh
Confidence 2211 233433222222 124799999999999999999999999985 44666666533211100 0000000 0
Q ss_pred --ccCcccceeeeeccCCCCCCCCCCCCCccceEEEeccccchHHHHHHhhhccCCCcccchhhhhhhhhhcCCCCCcEE
Q 021149 145 --RRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVG 222 (316)
Q Consensus 145 --~~~~~vHr~~~~~~~~~~C~~~~~~ppcTgFVEiMaPVFSR~Awrcvw~miqndlvhGWGLD~~w~~c~~g~~~~kiG 222 (316)
.....++........ .. ..+ ++...+=+|+|++++.+=.+ +. ...+=|+.+...+. ..+.+++
T Consensus 294 ~~~~~~~~~~~~~~~~~-~~-----~~~----~~~G~~~~~Rr~al~~vGgf--~~--~~~~ED~~l~~rl~-~~G~ri~ 358 (802)
T 4hg6_A 294 CPPENEMFYGKIHRGLD-RW-----GGA----FFCGSAAVLRRRALDEAGGF--AG--ETITEDAETALEIH-SRGWKSL 358 (802)
T ss_dssp SCCTTHHHHHTHHHHHH-HT-----TCC----CCCSSSEEEEHHHHHHHTTC--CC--SSSSHHHHHHHHHH-TTTCCEE
T ss_pred hhHHHHHHHHHHHhhHh-hc-----CCc----eecccchhhhHHHHHHcCCc--CC--CCcchHHHHHHHHH-HcCCeEE
Confidence 000001100000000 00 001 11223346899999987211 21 22356888765554 2456899
Q ss_pred EEeeceEEecc
Q 021149 223 VVDSEYIVHLG 233 (316)
Q Consensus 223 VVDa~~V~H~~ 233 (316)
.++...+.|..
T Consensus 359 ~~~~~~~~~~~ 369 (802)
T 4hg6_A 359 YIDRAMIAGLQ 369 (802)
T ss_dssp ECCCCCEEECC
T ss_pred EecCCEEEecC
Confidence 88877776653
No 15
>1o7q_A N-acetyllactosaminide alpha-1,3- galactosyltransferase; 3-galactosyltransferase-UDP complex, glycosyltransferase, glycoprotein, transmembrane; HET: GAL NAG UDP; 1.3A {Bos taurus} SCOP: c.68.1.9 PDB: 1gwv_A* 1gx0_A* 1gww_A* 1k4v_A* 1gx4_A* 2jco_A 1g8o_A* 1fg5_N* 1g93_A* 2wgz_A* 1o7o_A* 2vs4_A* 2jck_A* 2jcl_A 2vfz_A* 2vs3_A* 1vzu_A* 1vzx_A* 1vzt_A* 2jcj_A* ...
Probab=23.06 E-value=1.3e+02 Score=28.41 Aligned_cols=88 Identities=18% Similarity=0.229 Sum_probs=54.3
Q ss_pred CcEEEEEecccc----hhhHHHHhhcCCCCCcEEEEEEecCccCccccccccC-ceeEEEeeccchhh---hhhhc---c
Q 021149 18 MNLLAIAAGIKQ----KKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWAD-RAIHVSAANQTKWW---FAKRF---L 86 (316)
Q Consensus 18 k~Lva~~vG~kq----k~~vd~~v~kf~~~nF~v~LfhYDg~v~~w~d~ews~-~aiHv~a~kqtKWw---~akRf---L 86 (316)
--|+++++|.=. +......=+-| ..++.|.-+-+=...+.--.+++.. +-++|....+.+.| -+.|+ +
T Consensus 50 IGl~vfa~GkY~~~fl~~Fl~SAEk~F-m~g~~v~YYVFTD~~~~~p~v~l~~~r~~~V~~i~~~~~W~d~sm~Rm~~i~ 128 (289)
T 1o7q_A 50 VGLTVFAVGRYIEHYLEEFLTSANKHF-MVGHPVIFYIMVDDVSRMPLIELGPLRSFKVFKIKPEKRWQDISMMRMKTIG 128 (289)
T ss_dssp EEEEEEECTTHHHHHHHHHHHHHHHHB-STTSCEEEEEEESCGGGCCCCCCCTTEEEEEEECCCCSSHHHHHHHHHHHHH
T ss_pred EEEEEEEecccHHHHHHHHHHHHHHhc-cCCCeEEEEEEeCChhhCCccccCCCCeEEEEEeccccCCchhHHHHHHHHH
Confidence 358889999754 33333333334 5778888777644333222334443 55788887778877 23443 2
Q ss_pred ---CccccccccEEEEecccccc
Q 021149 87 ---HPDIVAEYNYIFLWDEDIGV 106 (316)
Q Consensus 87 ---hPdiv~~YdYIflwDDDL~v 106 (316)
.-++..+.||+|..|=|...
T Consensus 129 ~~~~~~~~~evDYLf~~dvd~~F 151 (289)
T 1o7q_A 129 EHIVAHIQHEVDFLFCMDVDQVF 151 (289)
T ss_dssp HHHHHTHHHHCSEEEEECSSEEE
T ss_pred HHHHHHHhhcCCEEEEeeCCcEe
Confidence 25568899999999977543
No 16
>1omz_A Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; rossmann fold, DXD motif; HET: UD2; 2.10A {Mus musculus} SCOP: c.68.1.15 PDB: 1omx_A* 1on6_A* 1on8_A*
Probab=22.17 E-value=42 Score=31.55 Aligned_cols=104 Identities=13% Similarity=0.115 Sum_probs=58.3
Q ss_pred CCCcEEEEEecccchhhHHHHhhcCC-CCCcEEEEEEecCccCccccccccC---ceeEEEeeccchhhhhhhccCcccc
Q 021149 16 PPMNLLAIAAGIKQKKIVDQIVRKFP-SKDFVVMLFHYDGVVDEWKDLVWAD---RAIHVSAANQTKWWFAKRFLHPDIV 91 (316)
Q Consensus 16 ~~k~Lva~~vG~kqk~~vd~~v~kf~-~~nF~v~LfhYDg~v~~w~d~ews~---~aiHv~a~kqtKWw~akRfLhPdiv 91 (316)
..++-++|-+-. ......++|+... ...-+=+++..-..-..--+..|.. .++.|....+.+==+-.||+- .-.
T Consensus 27 ~~~FTvvi~ty~-R~~~L~~lv~~~~~~~~v~~IvVvWn~~~~~pp~~~~~~~~~~~vpv~v~~~~~nsLnnRF~p-~~~ 104 (293)
T 1omz_A 27 LDSFTLIMQTYN-RTDLLLRLLNHYQAVPSLHKVIVVWNNVGEKGPEELWNSLGPHPIPVIFKPQTANKMRNRLQV-FPE 104 (293)
T ss_dssp TTCEEEEEEESS-CHHHHHHHHHHHTTSTTEEEEEEEECCTTCCCTHHHHHHTCCCSSCEEEEECSSCCGGGGGSC-CTT
T ss_pred CCceEEEEEeec-ccHHHHHHHHHHhcCCCCCeEEEEeCCCCCCCChhhccccCCCCccEEEEeCCCCchhhccCC-Ccc
Confidence 345555554433 3445555565442 2334444444433211122223422 134444444443345677764 333
Q ss_pred ccccEEEEeccccccCCCChHHHHHHHHHh
Q 021149 92 AEYNYIFLWDEDIGVENFNPRRYLSIVKDE 121 (316)
Q Consensus 92 ~~YdYIflwDDDL~vd~f~i~ry~~Ivr~~ 121 (316)
-+-|.||..|||+.+...+++.=|+.-+++
T Consensus 105 i~T~AVLslDDDv~l~~~el~faF~vWr~~ 134 (293)
T 1omz_A 105 VETNAVLMVDDDTLISAQDLVFAFSIWQQF 134 (293)
T ss_dssp CCSSEEEEECTTEEECHHHHHHHHHHHTTS
T ss_pred CCcCEEEEEcCCCCCCHHHHHHHHHHHHHC
Confidence 468999999999999999999989888764
Done!