Query 021150
Match_columns 316
No_of_seqs 146 out of 1655
Neff 10.1
Searched_HMMs 29240
Date Mon Mar 25 13:28:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021150.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021150hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1okc_A ADP, ATP carrier protei 100.0 2.2E-55 7.6E-60 380.3 26.9 288 10-303 4-297 (297)
2 2lck_A Mitochondrial uncouplin 100.0 9.5E-56 3.3E-60 383.4 20.7 290 15-313 3-296 (303)
3 1okc_A ADP, ATP carrier protei 100.0 4.5E-35 1.6E-39 253.0 15.0 193 113-305 5-203 (297)
4 2lck_A Mitochondrial uncouplin 100.0 1.5E-34 5.2E-39 250.3 17.0 187 117-307 3-196 (303)
5 3tgu_G UQCRQ, mitochondrial ub 67.8 3 0.0001 27.3 2.1 42 270-311 33-74 (81)
6 1pp9_G Ubiquinol-cytochrome C 56.9 5.5 0.00019 26.0 1.9 44 269-312 32-75 (81)
7 3cx5_H Cytochrome B-C1 complex 26.2 51 0.0017 22.1 2.7 39 269-307 42-80 (93)
8 3f2e_A SIRV coat protein; four 23.6 24 0.00082 22.5 0.7 59 252-310 5-70 (100)
9 1bax_A M-PMV MA, M-PMV matrix 23.3 80 0.0027 21.1 3.2 62 254-315 7-78 (94)
10 2acm_A Mucin-1; auto-catalytic 19.0 22 0.00076 21.4 -0.1 20 256-275 40-59 (66)
No 1
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A*
Probab=100.00 E-value=2.2e-55 Score=380.29 Aligned_cols=288 Identities=25% Similarity=0.414 Sum_probs=241.2
Q ss_pred cchhHHHHhHHHHHHHHHHHhhchHHHHHHHHHhcCCCCCCCCcccccchHHHHHHHHHhhchhcccccchhhhhhhccc
Q 021150 10 SKGILCNAGAGAAAGIIAATFVCPLDVIKTRLQVHGLPKLTNGTVKGSLIVGSLEQIFQKEGLRGMYRGLSPTVLALLPN 89 (316)
Q Consensus 10 ~~~~~~~~~~g~~a~~~~~~i~~Pld~vk~~~q~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~gl~~G~~~~~~~~~~~ 89 (316)
+.+.+..+++|++||+++.++++|+|++|+|+|++.............+.++++++++++||++|||||+.+++++.++.
T Consensus 4 ~~~~~~~~~aG~~ag~~~~~~~~Pld~vKtrlQ~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~ 83 (297)
T 1okc_A 4 ALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPT 83 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHhcccccccccccccccHHHHHHHHHhccchhheecccHHHHHHHHHH
Confidence 45678899999999999999999999999999998643221122233458999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHhhccC-CCCCC--CchhHHHHHHHHHHHHHHHhhCcHHHHHHHHHhccCCCCCCCCCCcHHHHHHHH
Q 021150 90 WAVYFTMYEQLKSFLCSE-DKNHH--LSVGANVIAAAVAGAATTIATNPLWVVKTRLQQTQGMKAGVVPYRSTLSALSRI 166 (316)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~g~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~i 166 (316)
.+++|.+||.+++.+... +.... ......+++|++||+++.++++|+|++|+|+|.+.........|++.+++++++
T Consensus 84 ~~~~f~~ye~~k~~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~~~i 163 (297)
T 1okc_A 84 QALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKI 163 (297)
T ss_dssp HHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHhccccCCCcCcCCCCHHHHHHHH
Confidence 999999999999954332 21111 234578899999999999999999999999997654333345689999999999
Q ss_pred HHhhhHHHhhcchhhhhcc-chhhhchHhhHHHHHHHHHhcCCCCCCCCChHHHHHHHHHHHHHHHhhcCcHHHHHHHHh
Q 021150 167 AQEEGIRGLYSGLVPALAG-ISHVAIQFPTYEKIKMHLADQGNTSMDKLSARDVAVASSVSKIFASTLTYPHEVVRSRLQ 245 (316)
Q Consensus 167 ~~~~G~~~ly~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~Pld~i~~r~q 245 (316)
+++||+++||+|+.+++++ ++.++++|.+||.+|+.+.... +.+....+++|++||++++++++|+|+||+|||
T Consensus 164 ~~~eG~~glyrG~~~~l~~~~~~~~~~f~~ye~~k~~~~~~~-----~~~~~~~~~~g~~ag~~a~~~t~P~dvvktr~q 238 (297)
T 1okc_A 164 FKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPK-----NVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMM 238 (297)
T ss_dssp HHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGGG-----CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhccHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHhccCC-----CccHHHHHHHHHHHHHHHHHhcChHHHHHHHHh
Confidence 9999999999999999996 6899999999999999764322 235677789999999999999999999999999
Q ss_pred hcCCC--CCCCCCcHHHHHHHHHHhcCcccccccchhhhhhhhhhhhHHHHHHHHHHHHH
Q 021150 246 EQGHH--SEKRYSGVVDCIKKVFQQEGLPGFYRGCATNLLRTTPAAVITFTSFEMIHRFL 303 (316)
Q Consensus 246 ~~~~~--~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~~~~i~~~~~~~~~~~~ 303 (316)
.+... ....|.++++|+++|+|+||++|||||+.++++|. +..++.|.+||.+++++
T Consensus 239 ~~~~~~~~~~~y~~~~~~~~~i~~~eG~~glyrG~~~~~~r~-~~~~~~f~~ye~~k~~l 297 (297)
T 1okc_A 239 MQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRG-MGGAFVLVLYDEIKKFV 297 (297)
T ss_dssp TTTTCCGGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHHH-HHHHHHHHHHHTC----
T ss_pred hcCCCCCCCCCCCCHHHHHHHHHHHcCcCeEecchHHHHHhh-ccceeeehHHHHHHhhC
Confidence 87532 23479999999999999999999999999999996 56889999999988754
No 2
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus}
Probab=100.00 E-value=9.5e-56 Score=383.38 Aligned_cols=290 Identities=26% Similarity=0.409 Sum_probs=250.5
Q ss_pred HHHhHHHHHHHHHHHhhchHHHHHHHHHhcCCCCCC---CCcccccchHHHHHHHHHhhchhcccccchhhhhhhccchh
Q 021150 15 CNAGAGAAAGIIAATFVCPLDVIKTRLQVHGLPKLT---NGTVKGSLIVGSLEQIFQKEGLRGMYRGLSPTVLALLPNWA 91 (316)
Q Consensus 15 ~~~~~g~~a~~~~~~i~~Pld~vk~~~q~~~~~~~~---~~~~~~~~~~~~~~~i~~~~G~~gl~~G~~~~~~~~~~~~~ 91 (316)
.++++|++|++++.++++|+|++|+|+|++...... .......+.++++++++++||++|||||+.+++++.++..+
T Consensus 3 ~~~~aG~~ag~~~~~~~~Pld~iKtrlQ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~ 82 (303)
T 2lck_A 3 VKFLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPRSLYNGLVAGLQRQMSFAS 82 (303)
T ss_dssp CHHHHHHHHHHHHHHTTHHHHHHHHHSSCCTTCCSHHHHCSCSSCSCHHHHHHHHHHHHCHHHHHSSHHHHHHHHHHHHH
T ss_pred hhHHhHHHHHHHHHHHcCcHHHHHHHHHhhhccccccccccCCCCCCHHHHHHHHHHhhCHHHHHcCCHHHHHHHHHHHH
Confidence 468899999999999999999999999998643210 01112344899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccCCCCCCCchhHHHHHHHHHHHHHHHhhCcHHHHHHHHHhccCCCCCCCCCCcHHHHHHHHHHhhh
Q 021150 92 VYFTMYEQLKSFLCSEDKNHHLSVGANVIAAAVAGAATTIATNPLWVVKTRLQQTQGMKAGVVPYRSTLSALSRIAQEEG 171 (316)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~i~~~~G 171 (316)
++|.+||.+++.+.+..+ ..+....+++|++||+++.++++|+|++|+|+|.+... .....|++.++++++++++||
T Consensus 83 i~f~~ye~~k~~~~~~~~--~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~-~~~~~~~~~~~~~~~i~~~eG 159 (303)
T 2lck_A 83 VRIGLYDSVKQFYTKGSE--HAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARA-GGGRRYQSTVEAYKTIAREEG 159 (303)
T ss_dssp HTTTHHHHHHHHHSCCCS--SCCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCSC-CCSSSCCCHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhcCCc--CCcHHHHHHHHHHHHHHHHHHcCcHHHHHHHHhccccc-CCCCCCCCHHHHHHHHHHhcC
Confidence 999999999998865422 35677899999999999999999999999999975432 233468999999999999999
Q ss_pred HHHhhcchhhhhcc-chhhhchHhhHHHHHHHHHhcCCCCCCCCChHHHHHHHHHHHHHHHhhcCcHHHHHHHHhhcCCC
Q 021150 172 IRGLYSGLVPALAG-ISHVAIQFPTYEKIKMHLADQGNTSMDKLSARDVAVASSVSKIFASTLTYPHEVVRSRLQEQGHH 250 (316)
Q Consensus 172 ~~~ly~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~Pld~i~~r~q~~~~~ 250 (316)
+++||+|+.+++++ ++..+++|.+||.+|+.+..... ...+....+++|++||++++++++|+|+||+|||.+..
T Consensus 160 ~~glyrG~~~~l~~~~~~~~i~f~~ye~~k~~l~~~~~---~~~~~~~~~~~g~~ag~~~~~~~~P~dvvktrlq~~~~- 235 (303)
T 2lck_A 160 IRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKANL---MTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSAL- 235 (303)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTS---CCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCS-
T ss_pred hhhhhCCccHHHHHHHHHHHHHHHHHHHHHHHHHhccC---CCCchHHHHHHHHHHHHHHHHHcCHHHHHHHHHHhccc-
Confidence 99999999999996 68999999999999998765332 23456778999999999999999999999999999642
Q ss_pred CCCCCCcHHHHHHHHHHhcCcccccccchhhhhhhhhhhhHHHHHHHHHHHHHhhcCCCCCCC
Q 021150 251 SEKRYSGVVDCIKKVFQQEGLPGFYRGCATNLLRTTPAAVITFTSFEMIHRFLVSYFPPDPQP 313 (316)
Q Consensus 251 ~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 313 (316)
..|.++++|+++++|+||++|||||+.++++|.+|..+++|.+||.+++.+.+.+++++++
T Consensus 236 --~~y~~~~~~~~~i~~~eG~~glyrG~~~~~~r~~p~~~i~f~~ye~~k~~l~~~~~~~~~~ 296 (303)
T 2lck_A 236 --GQYHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALMAAYQSREAP 296 (303)
T ss_dssp --SSCCSHHHHHHHHHHSSCTHHHHSCCHHHHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHCC
T ss_pred --cccCCHHHHHHHHHHHcChHHhhccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCC
Confidence 4699999999999999999999999999999999999999999999999888766544443
No 3
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A*
Probab=100.00 E-value=4.5e-35 Score=252.99 Aligned_cols=193 Identities=21% Similarity=0.347 Sum_probs=163.9
Q ss_pred CchhHHHHHHHHHHHHHHHhhCcHHHHHHHHHhccCCC--CCCCCCCcHHHHHHHHHHhhhHHHhhcchhhhhcc-chhh
Q 021150 113 LSVGANVIAAAVAGAATTIATNPLWVVKTRLQQTQGMK--AGVVPYRSTLSALSRIAQEEGIRGLYSGLVPALAG-ISHV 189 (316)
Q Consensus 113 ~~~~~~~~~g~~ag~~~~~~~~P~d~ik~r~q~~~~~~--~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~-~~~~ 189 (316)
.+....+++|++||+++.++++|+|++|+|+|.+.... .....|++.++++++++++||+++||||+.+.+++ ++..
T Consensus 5 ~~~~~~~~aG~~ag~~~~~~~~Pld~vKtrlQ~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~ 84 (297)
T 1okc_A 5 LSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQ 84 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHhcccccccccccccccHHHHHHHHHhccchhheecccHHHHHHHHHHH
Confidence 45667899999999999999999999999999764321 12346899999999999999999999999999996 6899
Q ss_pred hchHhhHHHHHHHHHhcCCCCCC-CCChHHHHHHHHHHHHHHHhhcCcHHHHHHHHhhcCCC--CCCCCCcHHHHHHHHH
Q 021150 190 AIQFPTYEKIKMHLADQGNTSMD-KLSARDVAVASSVSKIFASTLTYPHEVVRSRLQEQGHH--SEKRYSGVVDCIKKVF 266 (316)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~a~~~~~~~~~Pld~i~~r~q~~~~~--~~~~~~~~~~~~~~i~ 266 (316)
+++|.+||.+|+.+....+.... .......+++|++||+++.++++|+|+||+|||++... ....|.++++|+++++
T Consensus 85 ~~~f~~ye~~k~~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~~~i~ 164 (297)
T 1okc_A 85 ALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIF 164 (297)
T ss_dssp HHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHhccccCCCcCcCCCCHHHHHHHHH
Confidence 99999999999965443221111 11235678999999999999999999999999997432 2357899999999999
Q ss_pred HhcCcccccccchhhhhhhhhhhhHHHHHHHHHHHHHhh
Q 021150 267 QQEGLPGFYRGCATNLLRTTPAAVITFTSFEMIHRFLVS 305 (316)
Q Consensus 267 ~~~G~~~ly~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 305 (316)
++||++|||||+.++++|.+|..++.|.+||.+++.+.+
T Consensus 165 ~~eG~~glyrG~~~~l~~~~~~~~~~f~~ye~~k~~~~~ 203 (297)
T 1okc_A 165 KSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPD 203 (297)
T ss_dssp HHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCG
T ss_pred HhccHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999997754
No 4
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus}
Probab=100.00 E-value=1.5e-34 Score=250.25 Aligned_cols=187 Identities=24% Similarity=0.437 Sum_probs=164.6
Q ss_pred HHHHHHHHHHHHHHHhhCcHHHHHHHHHhccCCCC-----CCCCCCcHHHHHHHHHHhhhHHHhhcchhhhhcc-chhhh
Q 021150 117 ANVIAAAVAGAATTIATNPLWVVKTRLQQTQGMKA-----GVVPYRSTLSALSRIAQEEGIRGLYSGLVPALAG-ISHVA 190 (316)
Q Consensus 117 ~~~~~g~~ag~~~~~~~~P~d~ik~r~q~~~~~~~-----~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~-~~~~~ 190 (316)
..+++|++||+++.++++|+|++|+|+|.+..... ....|++.++++++++++||+++||+|+.+.+++ ++..+
T Consensus 3 ~~~~aG~~ag~~~~~~~~Pld~iKtrlQ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~ 82 (303)
T 2lck_A 3 VKFLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPRSLYNGLVAGLQRQMSFAS 82 (303)
T ss_dssp CHHHHHHHHHHHHHHTTHHHHHHHHHSSCCTTCCSHHHHCSCSSCSCHHHHHHHHHHHHCHHHHHSSHHHHHHHHHHHHH
T ss_pred hhHHhHHHHHHHHHHHcCcHHHHHHHHHhhhccccccccccCCCCCCHHHHHHHHHHhhCHHHHHcCCHHHHHHHHHHHH
Confidence 36799999999999999999999999996543211 1346899999999999999999999999999995 68999
Q ss_pred chHhhHHHHHHHHHhcCCCCCCCCChHHHHHHHHHHHHHHHhhcCcHHHHHHHHhhcCCC-CCCCCCcHHHHHHHHHHhc
Q 021150 191 IQFPTYEKIKMHLADQGNTSMDKLSARDVAVASSVSKIFASTLTYPHEVVRSRLQEQGHH-SEKRYSGVVDCIKKVFQQE 269 (316)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~Pld~i~~r~q~~~~~-~~~~~~~~~~~~~~i~~~~ 269 (316)
++|.+||.+|+.+....+ ..+....+++|++||+++.++++|+|+||+|||++... ....|.+.++|+++|+++|
T Consensus 83 i~f~~ye~~k~~~~~~~~----~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~~i~~~e 158 (303)
T 2lck_A 83 VRIGLYDSVKQFYTKGSE----HAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREE 158 (303)
T ss_dssp HTTTHHHHHHHHHSCCCS----SCCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCSCCCSSSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCc----CCcHHHHHHHHHHHHHHHHHHcCcHHHHHHHHhcccccCCCCCCCCHHHHHHHHHHhc
Confidence 999999999998865321 35677889999999999999999999999999997542 3457899999999999999
Q ss_pred CcccccccchhhhhhhhhhhhHHHHHHHHHHHHHhhcC
Q 021150 270 GLPGFYRGCATNLLRTTPAAVITFTSFEMIHRFLVSYF 307 (316)
Q Consensus 270 G~~~ly~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 307 (316)
|++|||||+.++++|.+|..++.|.+||.+++.+.+..
T Consensus 159 G~~glyrG~~~~l~~~~~~~~i~f~~ye~~k~~l~~~~ 196 (303)
T 2lck_A 159 GIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKAN 196 (303)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTT
T ss_pred ChhhhhCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999987643
No 5
>3tgu_G UQCRQ, mitochondrial ubiquinol-cytochrome C reductase UB binding protein QP-C; cytochrome BC1, membrane protein, heme protein, rieske iron protein; HET: HEM WF3 UQ CDL PEE HEC BOG; 2.70A {Gallus gallus} PDB: 3cwb_G* 3h1i_G* 3h1h_G* 3h1k_G* 3h1l_G* 3h1j_G* 3l71_G* 3l72_G* 3l73_G* 3l74_G* 3l75_G* 3l70_G*
Probab=67.76 E-value=3 Score=27.34 Aligned_cols=42 Identities=12% Similarity=0.297 Sum_probs=33.1
Q ss_pred CcccccccchhhhhhhhhhhhHHHHHHHHHHHHHhhcCCCCC
Q 021150 270 GLPGFYRGCATNLLRTTPAAVITFTSFEMIHRFLVSYFPPDP 311 (316)
Q Consensus 270 G~~~ly~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 311 (316)
|+...+|-+..+++.++|..++...+|+...+.......++|
T Consensus 33 ~i~N~~RR~~~q~l~v~pPfi~~Y~i~~Wa~~~ne~l~rKnp 74 (81)
T 3tgu_G 33 ALPNVWRRFSSQVFKVAPPFLGAYLLYSWGTQEFERLKRKNP 74 (81)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCG
T ss_pred hhhHHHHHHHHhhhHhhHHHHHHHHHHHHHHHHHHHHhCCCH
Confidence 555566667778888999999999999999988877655444
No 6
>1pp9_G Ubiquinol-cytochrome C reductase complex ubiquino protein QP-C; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: f.23.13.1 PDB: 1bgy_G* 1be3_G* 1l0n_G* 1ntk_G* 1ntm_G* 1ntz_G* 1nu1_G* 1l0l_G* 1ppj_G* 1sqb_G* 1sqp_G* 1sqq_G* 1sqv_G* 1sqx_G* 2a06_G* 2fyu_G* 2ybb_G* 1bcc_G* 2bcc_G* 3bcc_G* ...
Probab=56.85 E-value=5.5 Score=26.04 Aligned_cols=44 Identities=18% Similarity=0.311 Sum_probs=34.4
Q ss_pred cCcccccccchhhhhhhhhhhhHHHHHHHHHHHHHhhcCCCCCC
Q 021150 269 EGLPGFYRGCATNLLRTTPAAVITFTSFEMIHRFLVSYFPPDPQ 312 (316)
Q Consensus 269 ~G~~~ly~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 312 (316)
.|+...+|-+.-+++.++|..++...+|+...+.......++|+
T Consensus 32 ~~i~n~~RR~~~~~l~v~pPfv~~Y~i~~Wa~~~~e~~~rKnp~ 75 (81)
T 1pp9_G 32 KGIPNVLRRTRACILRVAPPFVAFYLVYTWGTQEFEKSKRKNPA 75 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCC-
T ss_pred hhhhHHHHHHHhcceeeehhHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 35566677777888899999999999999999988776555543
No 7
>3cx5_H Cytochrome B-C1 complex subunit 8; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: f.23.13.1 PDB: 1kb9_H* 1kyo_H* 1p84_H* 1ezv_G* 3cxh_H* 2ibz_G*
Probab=26.21 E-value=51 Score=22.07 Aligned_cols=39 Identities=10% Similarity=0.081 Sum_probs=32.0
Q ss_pred cCcccccccchhhhhhhhhhhhHHHHHHHHHHHHHhhcC
Q 021150 269 EGLPGFYRGCATNLLRTTPAAVITFTSFEMIHRFLVSYF 307 (316)
Q Consensus 269 ~G~~~ly~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 307 (316)
+|+...+|-+.-+++.++|..++...+|+...+......
T Consensus 42 ~~i~N~~RR~~~q~l~v~pPfv~~Y~i~~Wa~~~~e~l~ 80 (93)
T 3cx5_H 42 NAVFNSFRRFKSQFLYVLIPAGIYWYWWKNGNEYNEFLY 80 (93)
T ss_dssp TTSSSCSHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hcchHHHHHHHhcceEEechHhHHHHHHHHHHHHHHHHh
Confidence 467777888888888999999999999998888776544
No 8
>3f2e_A SIRV coat protein; four helix bundle, virus coat protein, viral protein; HET: CIT; 1.67A {Sulfolobus islandicus rudivirus 1 variorganism_taxid}
Probab=23.63 E-value=24 Score=22.47 Aligned_cols=59 Identities=15% Similarity=0.349 Sum_probs=35.5
Q ss_pred CCCCCcHHHHHHHHHHhcCc----ccccccchhhhhhhhhh---hhHHHHHHHHHHHHHhhcCCCC
Q 021150 252 EKRYSGVVDCIKKVFQQEGL----PGFYRGCATNLLRTTPA---AVITFTSFEMIHRFLVSYFPPD 310 (316)
Q Consensus 252 ~~~~~~~~~~~~~i~~~~G~----~~ly~G~~~~~~~~~~~---~~i~~~~~~~~~~~~~~~~~~~ 310 (316)
.+++.++-+-+..++.+-|+ +++|.||+....|..-. .-....+-.-++-+..+.|.-+
T Consensus 5 vpkftsvne~vsavltqygvtgpnraiyqgfglkvaralnr~g~gpalvnminglkayyisafnan 70 (100)
T 3f2e_A 5 VPKFTAVAEQVSAVLSQYGITGPNRAIYQGFGLKVARALNRLGGGPALVNMINGLKAYYISAFNAN 70 (100)
T ss_dssp ---CHHHHHHHHHHHHHHTCCGGGHHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHCCC
T ss_pred CccchhHHHHHHHHHHHhcCCCccHHHHhhhhHHHHHHHHhcCCchHHHHHHhhhhHhhhHhhcCC
Confidence 46777777777888888776 67899998877665422 2223344455566665555433
No 9
>1bax_A M-PMV MA, M-PMV matrix protein; core protein, polyprotein, myristylation; NMR {Mason-pfizer monkey virus} SCOP: a.61.1.3 PDB: 2f76_X 2f77_X
Probab=23.31 E-value=80 Score=21.12 Aligned_cols=62 Identities=16% Similarity=0.297 Sum_probs=40.1
Q ss_pred CCCcHHHHHHHHHHhcCccc-------ccccchhhhhhhhhhhhHHHHHHHHHHHHHhhc---CCCCCCCCC
Q 021150 254 RYSGVVDCIKKVFQQEGLPG-------FYRGCATNLLRTTPAAVITFTSFEMIHRFLVSY---FPPDPQPHT 315 (316)
Q Consensus 254 ~~~~~~~~~~~i~~~~G~~~-------ly~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~---~~~~~~~~~ 315 (316)
+++.+...++++++++|++= ||.=.--..-..--.+.+..-.|+.+.+-+.++ ++++.-|.+
T Consensus 7 ~~q~fi~~lk~lLk~RgIkVkk~~L~~Ff~fi~~~cPWFp~eGtl~l~~W~kVG~~L~~~~~~~g~~~ip~~ 78 (94)
T 1bax_A 7 QHERYVEQLKQALKTRGVKVKYADLLKFFDFVKDTCPWFPQEGTIDIKRWRRVGDCFQDYYNTFGPEKVPVT 78 (94)
T ss_pred cchHHHHHHHHHHHHcCeeecHHHHHHHHHHHHHhCCCcCcCCcccHHHHHHHHHHHHHHHHHcCCCcCCcc
Confidence 45668888999999999754 443221111112223458888999999999877 556666654
No 10
>2acm_A Mucin-1; auto-catalytic proteolysis, structural protein; NMR {Homo sapiens}
Probab=19.02 E-value=22 Score=21.37 Aligned_cols=20 Identities=15% Similarity=0.481 Sum_probs=16.4
Q ss_pred CcHHHHHHHHHHhcCccccc
Q 021150 256 SGVVDCIKKVFQQEGLPGFY 275 (316)
Q Consensus 256 ~~~~~~~~~i~~~~G~~~ly 275 (316)
+++.+.+.+||+++++-||+
T Consensus 40 r~is~L~lqIykq~~FLgl~ 59 (66)
T 2acm_A 40 RDISEMFLQIYKQGGFLGLS 59 (66)
T ss_dssp HHHHHHHHHHCTTTTEEEEE
T ss_pred HHHHHHHHHHHccCCeeeee
Confidence 34677889999999998876
Done!