Query 021153
Match_columns 316
No_of_seqs 295 out of 1638
Neff 6.3
Searched_HMMs 46136
Date Fri Mar 29 08:00:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021153.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021153hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1627 Translation elongation 100.0 3.5E-76 7.7E-81 494.6 9.2 156 158-316 1-160 (160)
2 PF00647 EF1G: Elongation fact 100.0 1.7E-64 3.6E-69 408.4 4.8 107 155-263 1-107 (107)
3 cd03181 GST_C_EFB1gamma GST_C 99.6 1.3E-14 2.8E-19 118.6 10.7 107 2-108 15-121 (123)
4 cd03178 GST_C_Ure2p_like GST_C 99.4 6.1E-13 1.3E-17 107.0 8.6 98 2-101 15-112 (113)
5 cd03187 GST_C_Phi GST_C family 99.4 1E-12 2.2E-17 106.2 9.9 82 19-101 37-118 (118)
6 cd03188 GST_C_Beta GST_C famil 99.4 5.2E-13 1.1E-17 107.1 7.8 77 22-101 38-114 (114)
7 PF00043 GST_C: Glutathione S- 99.4 1.3E-12 2.9E-17 101.8 8.7 88 7-95 5-95 (95)
8 cd03180 GST_C_2 GST_C family, 99.4 2.4E-12 5.2E-17 102.6 9.9 93 2-97 16-110 (110)
9 cd03182 GST_C_GTT2_like GST_C 99.4 1.5E-12 3.2E-17 105.4 8.5 93 3-97 19-117 (117)
10 cd03207 GST_C_8 GST_C family, 99.4 2.3E-12 4.9E-17 102.4 9.2 77 22-102 25-101 (103)
11 cd03196 GST_C_5 GST_C family, 99.4 2.5E-12 5.5E-17 105.4 8.8 78 23-100 37-114 (115)
12 cd03206 GST_C_7 GST_C family, 99.4 3.6E-12 7.7E-17 101.2 8.6 90 2-97 11-100 (100)
13 cd03204 GST_C_GDAP1 GST_C fami 99.3 3.2E-12 6.9E-17 105.1 8.5 79 19-97 21-111 (111)
14 cd03177 GST_C_Delta_Epsilon GS 99.3 6.1E-12 1.3E-16 102.6 8.9 93 3-101 17-110 (118)
15 cd03183 GST_C_Theta GST_C fami 99.3 1.5E-11 3.3E-16 101.1 11.0 84 18-103 36-122 (126)
16 cd03191 GST_C_Zeta GST_C famil 99.3 1.5E-11 3.1E-16 100.6 10.4 78 23-103 40-119 (121)
17 cd03186 GST_C_SspA GST_N famil 99.3 1.3E-11 2.8E-16 98.8 9.6 77 22-100 30-106 (107)
18 cd03189 GST_C_GTT1_like GST_C 99.3 1.4E-11 3E-16 100.1 9.3 72 21-95 48-119 (119)
19 cd03209 GST_C_Mu GST_C family, 99.3 1.8E-11 3.9E-16 100.7 10.0 85 22-108 30-114 (121)
20 cd03198 GST_C_CLIC GST_C famil 99.3 1.9E-11 4.2E-16 103.7 10.1 84 20-103 22-124 (134)
21 cd03185 GST_C_Tau GST_C family 99.3 1.6E-11 3.5E-16 100.6 8.8 83 22-104 30-116 (126)
22 cd03201 GST_C_DHAR GST_C famil 99.3 2.5E-11 5.4E-16 100.8 8.7 78 26-103 29-110 (121)
23 PF13410 GST_C_2: Glutathione 99.2 3.2E-11 7E-16 89.3 7.8 68 23-90 2-69 (69)
24 cd03190 GST_C_ECM4_like GST_C 99.2 3E-11 6.5E-16 102.6 8.7 85 19-103 29-118 (142)
25 PLN02395 glutathione S-transfe 99.2 3.8E-11 8.2E-16 107.4 9.2 87 19-105 126-212 (215)
26 PLN02473 glutathione S-transfe 99.2 3.2E-11 7E-16 108.0 8.7 84 20-103 128-211 (214)
27 cd03210 GST_C_Pi GST_C family, 99.2 9.4E-11 2E-15 97.2 10.4 85 22-108 30-117 (126)
28 cd03184 GST_C_Omega GST_C fami 99.2 5.4E-11 1.2E-15 98.2 8.8 83 22-104 27-114 (124)
29 PRK13972 GSH-dependent disulfi 99.2 5.4E-11 1.2E-15 106.9 9.2 84 22-108 127-210 (215)
30 PRK10542 glutathionine S-trans 99.1 1.7E-10 3.6E-15 102.1 8.5 77 24-103 121-197 (201)
31 cd03208 GST_C_Alpha GST_C fami 99.1 4.1E-10 8.8E-15 95.3 10.5 76 29-106 41-118 (137)
32 TIGR01262 maiA maleylacetoacet 99.1 2.4E-10 5.2E-15 101.7 9.2 77 25-104 127-205 (210)
33 PRK10357 putative glutathione 99.1 3.1E-10 6.6E-15 100.7 9.7 81 22-103 120-200 (202)
34 cd03179 GST_C_1 GST_C family, 99.1 1.4E-10 3.1E-15 91.7 6.1 72 18-92 34-105 (105)
35 PRK09481 sspA stringent starva 99.1 4.1E-10 8.9E-15 101.2 9.4 81 21-103 121-202 (211)
36 cd03203 GST_C_Lambda GST_C fam 99.1 5.9E-10 1.3E-14 91.9 8.3 72 31-103 34-111 (120)
37 cd03194 GST_C_3 GST_C family, 99.1 1.1E-09 2.4E-14 89.7 9.7 71 26-102 40-113 (114)
38 cd00299 GST_C_family Glutathio 99.1 4.5E-10 9.8E-15 86.9 7.0 71 21-91 30-100 (100)
39 PTZ00057 glutathione s-transfe 99.1 5E-10 1.1E-14 100.3 8.2 80 24-105 120-201 (205)
40 cd03195 GST_C_4 GST_C family, 99.0 1.6E-09 3.5E-14 88.5 8.6 73 24-102 39-112 (114)
41 PLN02378 glutathione S-transfe 99.0 7.4E-10 1.6E-14 100.0 6.4 82 26-107 117-203 (213)
42 COG0625 Gst Glutathione S-tran 99.0 2.8E-09 6.1E-14 95.4 9.9 75 21-98 125-199 (211)
43 PRK11752 putative S-transferas 98.9 2.7E-09 5.9E-14 99.7 9.1 82 23-104 174-259 (264)
44 cd03192 GST_C_Sigma_like GST_C 98.9 1E-09 2.2E-14 87.1 4.9 69 21-91 33-104 (104)
45 KOG0867 Glutathione S-transfer 98.9 2.9E-09 6.3E-14 97.6 7.5 95 8-102 114-208 (226)
46 cd03193 GST_C_Metaxin GST_C fa 98.9 4.7E-09 1E-13 81.3 7.7 71 22-92 14-88 (88)
47 cd03205 GST_C_6 GST_C family, 98.9 6.6E-09 1.4E-13 82.2 7.9 70 19-91 29-98 (98)
48 cd03200 GST_C_JTV1 GST_C famil 98.9 6.3E-09 1.4E-13 82.9 7.1 59 30-94 38-96 (96)
49 TIGR00862 O-ClC intracellular 98.9 9.8E-09 2.1E-13 94.9 9.4 82 23-104 119-221 (236)
50 PF14497 GST_C_3: Glutathione 98.9 5.8E-09 1.3E-13 82.7 6.8 68 22-93 30-99 (99)
51 cd03202 GST_C_etherase_LigE GS 98.8 1.1E-08 2.4E-13 85.0 8.0 68 25-93 56-123 (124)
52 PLN02817 glutathione dehydroge 98.8 1.3E-08 2.8E-13 95.5 8.8 76 28-103 172-251 (265)
53 KOG4420 Uncharacterized conser 98.8 1.6E-08 3.5E-13 93.5 7.9 84 21-104 199-288 (325)
54 PRK15113 glutathione S-transfe 98.8 1.4E-08 3E-13 91.4 7.4 77 22-104 132-209 (214)
55 PRK10387 glutaredoxin 2; Provi 98.7 2.7E-08 5.9E-13 88.5 5.8 68 26-98 141-208 (210)
56 PLN02907 glutamate-tRNA ligase 98.6 9.3E-08 2E-12 101.0 7.6 66 31-96 94-159 (722)
57 cd03212 GST_C_Metaxin1_3 GST_C 98.5 4.3E-07 9.4E-12 77.1 7.5 72 23-94 60-135 (137)
58 cd03211 GST_C_Metaxin2 GST_C f 98.4 8.2E-07 1.8E-11 74.2 6.3 68 23-91 53-125 (126)
59 KOG1695 Glutathione S-transfer 98.4 1.4E-06 3E-11 79.1 8.1 79 27-106 123-203 (206)
60 TIGR02182 GRXB Glutaredoxin, G 98.3 7.3E-07 1.6E-11 80.3 5.3 66 26-97 140-206 (209)
61 KOG0406 Glutathione S-transfer 98.3 4.7E-06 1E-10 76.7 9.1 83 22-104 124-212 (231)
62 KOG0868 Glutathione S-transfer 98.3 1.6E-06 3.5E-11 76.5 5.8 77 25-104 130-208 (217)
63 cd03197 GST_C_mPGES2 GST_C fam 98.2 3.1E-06 6.7E-11 73.1 7.2 63 28-93 80-145 (149)
64 COG0435 ECM4 Predicted glutath 98.2 1.3E-06 2.7E-11 81.8 4.2 96 6-101 178-284 (324)
65 KOG2903 Predicted glutathione 97.9 3.7E-06 8E-11 78.1 1.5 95 7-101 177-286 (319)
66 KOG1422 Intracellular Cl- chan 97.6 0.00011 2.3E-09 66.6 5.8 78 26-103 122-205 (221)
67 PF14834 GST_C_4: Glutathione 97.1 0.0032 6.8E-08 52.1 8.1 74 23-102 39-113 (117)
68 KOG1147 Glutamyl-tRNA syntheta 96.3 0.0027 5.8E-08 64.6 2.7 76 29-104 90-165 (712)
69 KOG4244 Failed axon connection 96.0 0.0075 1.6E-07 56.5 4.0 67 27-94 203-273 (281)
70 KOG3027 Mitochondrial outer me 95.9 0.022 4.8E-07 51.8 6.5 77 18-94 168-248 (257)
71 PF04399 Glutaredoxin2_C: Glut 94.8 0.097 2.1E-06 44.5 6.5 68 25-97 57-124 (132)
72 cd03199 GST_C_GRX2 GST_C famil 93.2 0.32 7E-06 41.1 6.7 65 27-96 60-124 (128)
73 KOG3028 Translocase of outer m 93.0 0.56 1.2E-05 45.1 8.7 71 24-94 160-234 (313)
74 KOG3029 Glutathione S-transfer 91.2 0.46 1E-05 45.3 5.8 66 28-94 289-355 (370)
75 KOG1668 Elongation factor 1 be 89.6 0.34 7.3E-06 44.7 3.4 60 33-99 10-69 (231)
76 PF11801 Tom37_C: Tom37 C-term 73.3 7.7 0.00017 34.1 5.3 38 32-69 113-154 (168)
77 PF09868 DUF2095: Uncharacteri 55.6 6 0.00013 33.0 1.1 28 155-182 2-29 (128)
78 KOG0867 Glutathione S-transfer 53.2 1.9 4.2E-05 39.3 -2.4 78 27-108 91-169 (226)
79 COG2999 GrxB Glutaredoxin 2 [P 41.5 61 0.0013 29.3 5.3 67 27-98 142-208 (215)
80 PF13200 DUF4015: Putative gly 24.3 55 0.0012 31.8 2.3 69 200-274 137-219 (316)
81 PF11280 DUF3081: Protein of u 23.7 1.2E+02 0.0025 23.6 3.6 35 196-234 34-78 (79)
82 PF12569 NARP1: NMDA receptor- 22.6 37 0.0008 35.2 0.8 76 8-102 304-379 (517)
No 1
>KOG1627 consensus Translation elongation factor EF-1 gamma [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=3.5e-76 Score=494.56 Aligned_cols=156 Identities=51% Similarity=0.938 Sum_probs=150.9
Q ss_pred CCCCCCCCCCCchhhhhhhhccCCCcchhhhhhhhhhccCCCCceEEEEeeecCCCcceeEEeccchhhHHHhhhhhhhh
Q 021153 158 NPLDLLPPSKMILDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKY 237 (316)
Q Consensus 158 ~pl~~lp~~~f~ld~~Kr~ysN~~~~~~~~a~~~fwe~~d~e~~S~w~~~yky~~el~~~fms~Nli~Gf~qRl~~~rK~ 237 (316)
|||++||+|+|+||+|||+|||+|| +.+|||||||||||||||||+|+||||+||+++||||||||||||||+++|||
T Consensus 1 ~pl~~lp~~~Fvldd~kr~ySn~dt--~~~a~P~f~e~~d~e~ys~w~~~Yky~eeL~~~fms~nli~g~~qrl~~~rk~ 78 (160)
T KOG1627|consen 1 DPLDLLPKSTFVLDDWKRKYSNEDT--REVALPWFWEHFDPEGYSLWKVDYKYNEELTLTFMSCNLIGGFFQRLDKSRKY 78 (160)
T ss_pred CchhhCCCCccchhhhhhhhccccc--ccccchHHHHHhCcccceeeeccccCchHHHHHHHHhhhhhHHHHHHHHHHHh
Confidence 7999999999999999999999999 77999999999999999999999999999999999999999999999999999
Q ss_pred cceeEEEEeeCCCcceEEEEEEeCCCCCcccc--cccccccceeeEEcCCCCHHHHHHHHHHHhcCCCC--CCeeecccc
Q 021153 238 AFGKMLIIGNEPPYKVKGLWLFRGPEIPKFVM--DECYDMELYDWKKADISDEEQKERVNQMIEDHEPF--EGEALLDAK 313 (316)
Q Consensus 238 ~Fg~~~v~G~~~~~~I~G~~~~rG~~~~~~~~--~~~~d~e~y~~~kld~~~~edk~~v~~~~~~~~~~--~g~~~~~gk 313 (316)
+||||+|+|+|++++|+|+|+|||||+.+ .| |++||||||+|||||++++|+|++|++||+|++++ +||.++|||
T Consensus 79 ~f~~~~~~g~~~~~~i~g~~~~rg~ela~-~~spDwq~D~EsY~~tKLD~~see~k~~V~ey~sWeg~f~~~Gkaf~qgK 157 (160)
T KOG1627|consen 79 AFGSMVLFGENGNSTISGAWVFRGQELAP-AFSPDWQPDYESYTWTKLDPGSEETKELVNEYFSWEGPFEGNGKAFNDGK 157 (160)
T ss_pred hheeEEEeccCCCCcceEEEEEecccccc-ccCccccccccceeeeecCCCCHHHHHHHHHHHhhcccccccchhhhccc
Confidence 99999999999999999999999999733 66 99999999999999999999999999999999975 469999999
Q ss_pred ccC
Q 021153 314 CFK 316 (316)
Q Consensus 314 v~K 316 (316)
|||
T Consensus 158 i~K 160 (160)
T KOG1627|consen 158 IFK 160 (160)
T ss_pred ccC
Confidence 998
No 2
>PF00647 EF1G: Elongation factor 1 gamma, conserved domain; InterPro: IPR001662 Translation elongation factors are responsible for two main processes during protein synthesis on the ribosome [, , ]. EF1A (or EF-Tu) is responsible for the selection and binding of the cognate aminoacyl-tRNA to the A-site (acceptor site) of the ribosome. EF2 (or EF-G) is responsible for the translocation of the peptidyl-tRNA from the A-site to the P-site (peptidyl-tRNA site) of the ribosome, thereby freeing the A-site for the next aminoacyl-tRNA to bind. Elongation factors are responsible for achieving accuracy of translation and both EF1A and EF2 are remarkably conserved throughout evolution. Elongation factor EF1B (also known as EF-Ts or EF-1beta/gamma/delta) is a nucleotide exchange factor that is required to regenerate EF1A from its inactive form (EF1A-GDP) to its active form (EF1A-GTP). EF1A is then ready to interact with a new aminoacyl-tRNA to begin the cycle again. EF1B is more complex in eukaryotes than in bacteria, and can consist of three subunits: EF1B-alpha (or EF-1beta), EF1B-gamma (or EF-1gamma) and EF1B-beta (or EF-1delta) []. This entry represents a conserved domain usually found near the C terminus of EF1B-gamma chains, a peptide of 410-440 residues. The gamma chain appears to play a role in anchoring the EF1B complex to the beta and delta chains and to other cellular components. More information about these proteins can be found at Protein of the Month: Elongation Factors [].; GO: 0003746 translation elongation factor activity, 0006414 translational elongation, 0005853 eukaryotic translation elongation factor 1 complex; PDB: 1PBU_A.
Probab=100.00 E-value=1.7e-64 Score=408.37 Aligned_cols=107 Identities=59% Similarity=1.183 Sum_probs=83.5
Q ss_pred CCCCCCCCCCCCCCchhhhhhhhccCCCcchhhhhhhhhhccCCCCceEEEEeeecCCCcceeEEeccchhhHHHhhhhh
Q 021153 155 KPKNPLDLLPPSKMILDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLA 234 (316)
Q Consensus 155 K~k~pl~~lp~~~f~ld~~Kr~ysN~~~~~~~~a~~~fwe~~d~e~~S~w~~~yky~~el~~~fms~Nli~Gf~qRl~~~ 234 (316)
|+|||||+||||+|+||+|||+|||+|| +++||||||||||+||||||+|+|+||+|||++|||||||||||||||++
T Consensus 1 K~k~Pl~~lp~s~f~lD~wKr~YSN~d~--~~~a~p~Fwe~~d~eg~Slw~~~Yky~~El~~~fmt~Nli~Gf~QRle~~ 78 (107)
T PF00647_consen 1 KPKNPLDLLPKSTFVLDEWKRKYSNEDT--RTVAMPWFWENFDPEGYSLWFCDYKYNDELTMTFMTCNLIGGFFQRLEKL 78 (107)
T ss_dssp ----GGGSS----S-HHHHHHHHHHS-G--GGTHHHHHHSS--TTT-EEEEE--S-GGG---STTHHHHHHHHHHHGGGT
T ss_pred CCCChHHHCCCCCCCHHHhhhhhcCCCc--hhhHHHHHHHhCCccccEEEEEecCChhhhccceeehhHHHHHHHHHHHH
Confidence 6899999999999999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred hhhcceeEEEEeeCCCcceEEEEEEeCCC
Q 021153 235 RKYAFGKMLIIGNEPPYKVKGLWLFRGPE 263 (316)
Q Consensus 235 rK~~Fg~~~v~G~~~~~~I~G~~~~rG~~ 263 (316)
||||||+|+|||+++++.|+|||||||||
T Consensus 79 rK~aFg~~~v~G~~~~~~I~Gvwv~rG~e 107 (107)
T PF00647_consen 79 RKYAFGSMSVFGEDNNSDISGVWVFRGQE 107 (107)
T ss_dssp GGGEEE--EEES-STT-EEEEEEEESSSS
T ss_pred hhhheeEEEEEecCCCCceEEEEEEecCC
Confidence 99999999999999999999999999997
No 3
>cd03181 GST_C_EFB1gamma GST_C family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role
Probab=99.58 E-value=1.3e-14 Score=118.57 Aligned_cols=107 Identities=37% Similarity=0.648 Sum_probs=91.8
Q ss_pred ccchhhHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHhhcCccccccC
Q 021153 2 EIDANISRWVYPRLGYMQYIPPAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEF 81 (316)
Q Consensus 2 El~~~~~~w~~p~~G~~p~nk~~~e~a~~~l~~~L~~LE~~L~~~tfLvGeriTlADI~la~~L~~~~~~~~d~~~~~~y 81 (316)
++.+++..++.+..+..+.+....+.+...+.+.|+.||++|..++||+|+++|+|||++++.+.++....++..++..+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~siaDi~l~~~~~~~~~~~~~~~~~~~~ 94 (123)
T cd03181 15 ELLPAVAAWFLPLLGIAPYNKKSVEAALEELDRVLGVLEERLLKRTYLVGERLTLADIFVAGALLLGFTYVFDKEWRAKY 94 (123)
T ss_pred hhHHHHHHHHHHHcCccCCCHHHHHHHHHHHHHHHHHHHHHHccCceeccCCccHHHHHHHHHHHHHHHHHcCHHHHHhC
Confidence 45566666676666655667788889999999999999999999999999999999999999998876555554446789
Q ss_pred chHHHHHHHHhcChhHHHhhccccccc
Q 021153 82 PHVERYFWTVANQPKIKKFLGDFKQAE 108 (316)
Q Consensus 82 P~L~rW~~tv~a~P~~k~vl~~~~~~~ 108 (316)
|+|.+|+++|.++|+|++++.+.++|+
T Consensus 95 p~l~~w~~~~~~~p~~~~~~~~~~~~~ 121 (123)
T cd03181 95 PNVTRWFNTVVNQPIFKAVFGEVKLCE 121 (123)
T ss_pred hHHHHHHHHHHcCHHHHHHcCCCCcCC
Confidence 999999999999999999999999997
No 4
>cd03178 GST_C_Ure2p_like GST_C family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of en
Probab=99.42 E-value=6.1e-13 Score=107.03 Aligned_cols=98 Identities=22% Similarity=0.226 Sum_probs=77.9
Q ss_pred ccchhhHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHhhcCccccccC
Q 021153 2 EIDANISRWVYPRLGYMQYIPPAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEF 81 (316)
Q Consensus 2 El~~~~~~w~~p~~G~~p~nk~~~e~a~~~l~~~L~~LE~~L~~~tfLvGeriTlADI~la~~L~~~~~~~~d~~~~~~y 81 (316)
++.|++..++.........++..++.....+.+.|+.||++|++++||+|+++|+|||++++.+.+...... .+...|
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~~~~~~~~~~~--~~~~~~ 92 (113)
T cd03178 15 GLGPMFGQAGHFSRYAPEKIPYAIERYTNEAKRLYGVLDKRLAGRDYLAGDEYSIADIAIFPWVRRLEWIGI--DDLDDF 92 (113)
T ss_pred cCCCcchHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHHHHccCCcccCCCCCeeeeeHHHHHHHHHhccc--cchhhc
Confidence 455666655443221123456778889999999999999999988999999999999999999988754432 246789
Q ss_pred chHHHHHHHHhcChhHHHhh
Q 021153 82 PHVERYFWTVANQPKIKKFL 101 (316)
Q Consensus 82 P~L~rW~~tv~a~P~~k~vl 101 (316)
|+|.+|+++|.++|++++++
T Consensus 93 p~l~~w~~~~~~~p~~~~~~ 112 (113)
T cd03178 93 PNVKRWLDRIAARPAVQRGL 112 (113)
T ss_pred hHHHHHHHHHhhCHHHHHhc
Confidence 99999999999999999865
No 5
>cd03187 GST_C_Phi GST_C family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes a
Probab=99.42 E-value=1e-12 Score=106.18 Aligned_cols=82 Identities=28% Similarity=0.374 Sum_probs=70.2
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHhhcCccccccCchHHHHHHHHhcChhHH
Q 021153 19 QYIPPAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIK 98 (316)
Q Consensus 19 p~nk~~~e~a~~~l~~~L~~LE~~L~~~tfLvGeriTlADI~la~~L~~~~~~~~d~~~~~~yP~L~rW~~tv~a~P~~k 98 (316)
+.++...+.+...+.+.|+.||++|++++|++|+++|+|||++++++.++.... ....+..+|+|.+|+++|.++|+++
T Consensus 37 ~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~~~~~~~~~~-~~~~~~~~p~l~~~~~~~~~~p~~~ 115 (118)
T cd03187 37 PTDEAVVEENEEKLKKVLDVYEARLSKSKYLAGDSFTLADLSHLPYLQYLMATP-FAKLFDSRPHVKAWWEDISARPAWK 115 (118)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHcccCcccCCCCccHHHHHHHHHHHHHHHcc-chhhhhcCchHHHHHHHHHhCHHHH
Confidence 567788888999999999999999998999999999999999999988765421 1223678999999999999999998
Q ss_pred Hhh
Q 021153 99 KFL 101 (316)
Q Consensus 99 ~vl 101 (316)
+++
T Consensus 116 ~~~ 118 (118)
T cd03187 116 KVL 118 (118)
T ss_pred hhC
Confidence 764
No 6
>cd03188 GST_C_Beta GST_C family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site for
Probab=99.42 E-value=5.2e-13 Score=107.11 Aligned_cols=77 Identities=25% Similarity=0.409 Sum_probs=66.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHhhcCccccccCchHHHHHHHHhcChhHHHhh
Q 021153 22 PPAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFL 101 (316)
Q Consensus 22 k~~~e~a~~~l~~~L~~LE~~L~~~tfLvGeriTlADI~la~~L~~~~~~~~d~~~~~~yP~L~rW~~tv~a~P~~k~vl 101 (316)
+...+...+.+.+.|..||++|.+++||+|+++|+|||++++.+.++....++ ...+|+|.+|+++|.++|++++++
T Consensus 38 ~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~t~aDi~~~~~~~~~~~~~~~---~~~~p~l~~w~~~~~~~p~~k~~~ 114 (114)
T cd03188 38 EEVKAAARERLAARLAYLDAQLAGGPYLLGDRFSVADAYLFVVLRWAPGVGLD---LSDWPNLAAYLARVAARPAVQAAL 114 (114)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCeeeCCCcchHHHHHHHHHHHHhhcCCC---hhhChHHHHHHHHHHhCHHhHhhC
Confidence 45577788899999999999999889999999999999999998876543333 468999999999999999999864
No 7
>PF00043 GST_C: Glutathione S-transferase, C-terminal domain; InterPro: IPR004046 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of cephalopods is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold. Each monomer is composed of a distinct N-terminal sub-domain, which adopts the thioredoxin fold, and a C-terminal all-helical sub-domain. This entry is the C-terminal domain.; PDB: 3UAP_A 3UAR_A 3QAV_A 3QAW_A 1Y6E_A 1U88_B 4AI6_B 1UA5_A 4AKH_A 3QMZ_S ....
Probab=99.40 E-value=1.3e-12 Score=101.84 Aligned_cols=88 Identities=24% Similarity=0.288 Sum_probs=70.8
Q ss_pred hHHHHHHhhcCC---CCChHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHhhcCccccccCch
Q 021153 7 ISRWVYPRLGYM---QYIPPAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPH 83 (316)
Q Consensus 7 ~~~w~~p~~G~~---p~nk~~~e~a~~~l~~~L~~LE~~L~~~tfLvGeriTlADI~la~~L~~~~~~~~d~~~~~~yP~ 83 (316)
+..++...+... +.+++..+.....+.+.|+.+|++|++++||+|+++|+|||++++.+.++.....+.. .++||+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~t~ADi~~~~~~~~~~~~~~~~~-~~~~P~ 83 (95)
T PF00043_consen 5 FSQYFWYFYFKDERAEKDEEMVEEARAKVPRYLEVLEKRLKGGPYLVGDKLTIADIALFPMLDWLERLGPDFL-FEKFPK 83 (95)
T ss_dssp HHHHHHHHHSTTHTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSSSBSS-CHHHHHHHHHHHHHHHHTTTTT-HTTSHH
T ss_pred HHHHhHHHhcCcccccCCHHHHHHHHHHHHHHHHHHHHHHcCCCeeeccCCchhHHHHHHHHHHHHHhCCCcc-cccCHH
Confidence 344554444332 2355678889999999999999999999999999999999999999998877654421 389999
Q ss_pred HHHHHHHHhcCh
Q 021153 84 VERYFWTVANQP 95 (316)
Q Consensus 84 L~rW~~tv~a~P 95 (316)
|.+|+++|.+||
T Consensus 84 l~~w~~~~~~~P 95 (95)
T PF00043_consen 84 LKKWYERMFARP 95 (95)
T ss_dssp HHHHHHHHHTSH
T ss_pred HHHHHHHHHcCC
Confidence 999999999998
No 8
>cd03180 GST_C_2 GST_C family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.39 E-value=2.4e-12 Score=102.57 Aligned_cols=93 Identities=27% Similarity=0.437 Sum_probs=72.3
Q ss_pred ccchhhHHHHHHhhcCC--CCChHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHhhcCccccc
Q 021153 2 EIDANISRWVYPRLGYM--QYIPPAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTS 79 (316)
Q Consensus 2 El~~~~~~w~~p~~G~~--p~nk~~~e~a~~~l~~~L~~LE~~L~~~tfLvGeriTlADI~la~~L~~~~~~~~d~~~~~ 79 (316)
.+.+++..++.+..+.. ..++..++...+.+.+.|+.||++|.+++|++|+++|+|||++++++........ .+.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lE~~L~~~~~l~g~~~t~aDi~~~~~~~~~~~~~~---~~~ 92 (110)
T cd03180 16 TLNPAFRYAFWGLVRTPPEQRDPAAIAASLAAWAKLMAILDAQLAGRPYLAGDRFTLADIPLGCSAYRWFELPI---ERP 92 (110)
T ss_pred hcChHHHHHHHHHHcCCcccCCHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHHHHHHccc---ccc
Confidence 35566655555544322 2345677888999999999999999988999999999999999998854433322 268
Q ss_pred cCchHHHHHHHHhcChhH
Q 021153 80 EFPHVERYFWTVANQPKI 97 (316)
Q Consensus 80 ~yP~L~rW~~tv~a~P~~ 97 (316)
.||+|.+|+++|.++|+|
T Consensus 93 ~~p~l~~~~~~~~~~p~~ 110 (110)
T cd03180 93 PLPHLERWYARLRARPAF 110 (110)
T ss_pred cCchHHHHHHHHHhCCCC
Confidence 899999999999999975
No 9
>cd03182 GST_C_GTT2_like GST_C family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensiti
Probab=99.38 E-value=1.5e-12 Score=105.40 Aligned_cols=93 Identities=20% Similarity=0.258 Sum_probs=74.7
Q ss_pred cchhhHHHHHHhhcCC------CCChHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHhhcCcc
Q 021153 3 IDANISRWVYPRLGYM------QYIPPAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKS 76 (316)
Q Consensus 3 l~~~~~~w~~p~~G~~------p~nk~~~e~a~~~l~~~L~~LE~~L~~~tfLvGeriTlADI~la~~L~~~~~~~~d~~ 76 (316)
+.+++..++.+..+.. +.+....+.+...+.+.|..||++|++++|++|+++|+|||++++.+.++....+ +
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~l~gd~~t~aDi~l~~~~~~~~~~~~--~ 96 (117)
T cd03182 19 GLYPIGQAFRHATPGLKPPDREEQVPEWGERSKARAADFLAYLDTRLAGSPYVAGDRFTIADITAFVGLDFAKVVKL--R 96 (117)
T ss_pred HHHHHHHHHhcCCccccCccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHhHHHHhcCC--C
Confidence 4555555555544332 2457788999999999999999999988999999999999999999987654433 3
Q ss_pred ccccCchHHHHHHHHhcChhH
Q 021153 77 FTSEFPHVERYFWTVANQPKI 97 (316)
Q Consensus 77 ~~~~yP~L~rW~~tv~a~P~~ 97 (316)
++..+|+|.+|+++|.++|++
T Consensus 97 ~~~~~p~l~~w~~~~~~~p~~ 117 (117)
T cd03182 97 VPEELTHLRAWYDRMAARPSA 117 (117)
T ss_pred CccccHHHHHHHHHHHhccCC
Confidence 457899999999999999974
No 10
>cd03207 GST_C_8 GST_C family, unknown subfamily 8; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.38 E-value=2.3e-12 Score=102.43 Aligned_cols=77 Identities=25% Similarity=0.435 Sum_probs=68.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHhhcCccccccCchHHHHHHHHhcChhHHHhh
Q 021153 22 PPAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFL 101 (316)
Q Consensus 22 k~~~e~a~~~l~~~L~~LE~~L~~~tfLvGeriTlADI~la~~L~~~~~~~~d~~~~~~yP~L~rW~~tv~a~P~~k~vl 101 (316)
....+.+..++.+.++.||++|++++||+|+++|+|||++++.+.++.... ++..+|+|.+|+++|.++|+++.++
T Consensus 25 ~~~~~~~~~~~~~~l~~le~~l~~~~~l~g~~~t~aDi~~~~~~~~~~~~~----~~~~~p~l~~w~~~~~~~p~~~~~~ 100 (103)
T cd03207 25 EPARMAGFGSYDDVLAALEQALAKGPYLLGERFTAADVLVGSPLGWGLQFG----LLPERPAFDAYIARITDRPAFQRAA 100 (103)
T ss_pred cchhhhhhhhHHHHHHHHHHHHccCCcccCCccCHHHHHHHHHHHHHHHcC----CCCCChHHHHHHHHHHcCHHHHHHh
Confidence 456778889999999999999999999999999999999999998876532 3578999999999999999999886
Q ss_pred c
Q 021153 102 G 102 (316)
Q Consensus 102 ~ 102 (316)
.
T Consensus 101 ~ 101 (103)
T cd03207 101 A 101 (103)
T ss_pred c
Confidence 5
No 11
>cd03196 GST_C_5 GST_C family, unknown subfamily 5; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.36 E-value=2.5e-12 Score=105.43 Aligned_cols=78 Identities=21% Similarity=0.221 Sum_probs=65.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHhhcCccccccCchHHHHHHHHhcChhHHHh
Q 021153 23 PAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKF 100 (316)
Q Consensus 23 ~~~e~a~~~l~~~L~~LE~~L~~~tfLvGeriTlADI~la~~L~~~~~~~~d~~~~~~yP~L~rW~~tv~a~P~~k~v 100 (316)
+..+.+.+.+.+.|..||++|++++||+|+++|+|||++++.+.++.........+..||+|.+|+++|.++|+++++
T Consensus 37 ~~~~~~~~~i~~~l~~le~~L~~~~yl~Gd~~tlADi~l~~~l~~~~~~~~~~~~~~~~P~L~~w~~r~~~rpa~~~~ 114 (115)
T cd03196 37 ESEEEYRQQAEAFLKDLEARLQQHSYLLGDKPSLADWAIFPFVRQFAHVDPKWFDQSPYPRLRRWLNGFLASPLFSKI 114 (115)
T ss_pred ccHHHHHHHHHHHHHHHHHHHccCCccCCCCccHHHHHHHHHHHHHHHhhhcccCcccCHHHHHHHHHHHcChHHHhh
Confidence 357888999999999999999999999999999999999998866433211111158899999999999999999985
No 12
>cd03206 GST_C_7 GST_C family, unknown subfamily 7; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.35 E-value=3.6e-12 Score=101.18 Aligned_cols=90 Identities=22% Similarity=0.245 Sum_probs=69.9
Q ss_pred ccchhhHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHhhcCccccccC
Q 021153 2 EIDANISRWVYPRLGYMQYIPPAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEF 81 (316)
Q Consensus 2 El~~~~~~w~~p~~G~~p~nk~~~e~a~~~l~~~L~~LE~~L~~~tfLvGeriTlADI~la~~L~~~~~~~~d~~~~~~y 81 (316)
++.|.....+....+..+. ..+.+..++.+.++.||++|++++|++|+++|+|||++++.+.+.....+ .+..|
T Consensus 11 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~~~~~~~~---~~~~~ 84 (100)
T cd03206 11 EIANGPAAARLITLFGAPL---DKETAIARAHRLLRLLEEHLAGRDWLAGDRPTIADVAVYPYVALAPEGGV---DLEDY 84 (100)
T ss_pred hcccchhHHHHHHHhCCHh---HHHHHHHHHHHHHHHHHHHHccCCccCCCCCCHHHHHHHHHHHHHhccCC---ChhhC
Confidence 4555555555444443332 56678899999999999999999999999999999999988866443322 25789
Q ss_pred chHHHHHHHHhcChhH
Q 021153 82 PHVERYFWTVANQPKI 97 (316)
Q Consensus 82 P~L~rW~~tv~a~P~~ 97 (316)
|+|.+|+++|.++|++
T Consensus 85 p~l~~~~~~~~~~p~~ 100 (100)
T cd03206 85 PAIRRWLARIEALPGF 100 (100)
T ss_pred cHHHHHHHHHHhCcCC
Confidence 9999999999999975
No 13
>cd03204 GST_C_GDAP1 GST_C family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal thioredoxin-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.35 E-value=3.2e-12 Score=105.13 Aligned_cols=79 Identities=23% Similarity=0.283 Sum_probs=68.4
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHhcCCC----------cccCCCCCHHHHHHHHHHHHHHHhhcCccc--cccCchHHH
Q 021153 19 QYIPPAEEGAVAALKRALDALNIHLASNT----------YLVGHSVTLADIVMICNLYYGFKLIMTKSF--TSEFPHVER 86 (316)
Q Consensus 19 p~nk~~~e~a~~~l~~~L~~LE~~L~~~t----------fLvGeriTlADI~la~~L~~~~~~~~d~~~--~~~yP~L~r 86 (316)
|-|...++....++.+.|+.||++|.+++ ||+|+++|+|||++++.+.++....++... +..||+|.+
T Consensus 21 ~~~~~~i~~~~~~l~~~l~~LE~~L~~~~~~~~~~~~~~yL~Gd~~TlADi~l~~~l~~~~~~~~~~~~~~~~~~P~l~~ 100 (111)
T cd03204 21 HDNVEYLKKILDELEMVLDQVEQELQRRKEETEEQKCQLWLCGDTFTLADISLGVTLHRLKFLGLSRRYWGNGKRPNLEA 100 (111)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccCCCccCCCCCCHHHHHHHHHHHHHHHcCccccccccccChHHHH
Confidence 66888999999999999999999998653 999999999999999999987754444321 468999999
Q ss_pred HHHHHhcChhH
Q 021153 87 YFWTVANQPKI 97 (316)
Q Consensus 87 W~~tv~a~P~~ 97 (316)
|+++|.+||+|
T Consensus 101 w~~rv~aRpsf 111 (111)
T cd03204 101 YFERVLQRESF 111 (111)
T ss_pred HHHHHHcCCCC
Confidence 99999999975
No 14
>cd03177 GST_C_Delta_Epsilon GST_C family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites th
Probab=99.32 E-value=6.1e-12 Score=102.62 Aligned_cols=93 Identities=22% Similarity=0.334 Sum_probs=73.0
Q ss_pred cchhhHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHH-hhcCccccccC
Q 021153 3 IDANISRWVYPRLGYMQYIPPAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFK-LIMTKSFTSEF 81 (316)
Q Consensus 3 l~~~~~~w~~p~~G~~p~nk~~~e~a~~~l~~~L~~LE~~L~~~tfLvGeriTlADI~la~~L~~~~~-~~~d~~~~~~y 81 (316)
+.+++..++.+.... ++...+.+...+.+.|+.||++|.+++||+|+++|+|||++++.+.++.. ..++ ...+
T Consensus 17 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~aDi~l~~~~~~~~~~~~~~---~~~~ 90 (118)
T cd03177 17 LYQRLRDYYYPILFG---GAEPPEEKLDKLEEALDFLETFLEGSDYVAGDQLTIADLSLVATVSTLEALLPLD---LSKY 90 (118)
T ss_pred HHHHHHHHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHccCCeeCCCCcCHHHHHHHHHHHHHHHhcCCC---hhhC
Confidence 445555555554321 12445678889999999999999888999999999999999999988754 2232 4679
Q ss_pred chHHHHHHHHhcChhHHHhh
Q 021153 82 PHVERYFWTVANQPKIKKFL 101 (316)
Q Consensus 82 P~L~rW~~tv~a~P~~k~vl 101 (316)
|+|.+|+++|.++|++++..
T Consensus 91 p~l~~w~~~~~~~p~~~~~~ 110 (118)
T cd03177 91 PNVRAWLERLKALPPYEEAN 110 (118)
T ss_pred chHHHHHHHHHcccchHHHH
Confidence 99999999999999999854
No 15
>cd03183 GST_C_Theta GST_C family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenatio
Probab=99.32 E-value=1.5e-11 Score=101.12 Aligned_cols=84 Identities=17% Similarity=0.237 Sum_probs=70.3
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHh-cCCCcccCCCCCHHHHHHHHHHHHHHHhhcCccccccCchHHHHHHHHhc--C
Q 021153 18 MQYIPPAEEGAVAALKRALDALNIHL-ASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVAN--Q 94 (316)
Q Consensus 18 ~p~nk~~~e~a~~~l~~~L~~LE~~L-~~~tfLvGeriTlADI~la~~L~~~~~~~~d~~~~~~yP~L~rW~~tv~a--~ 94 (316)
.+.++...+.+.+.+.+.+..||++| ++++|++|+++|+|||++++.+.+.....+ +.++.||+|.+|+++|.+ |
T Consensus 36 ~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~~l~Gd~~t~ADi~l~~~~~~~~~~~~--~~~~~~p~l~~w~~~~~~~~~ 113 (126)
T cd03183 36 KPVSPEKVKKAEENLEESLDLLENYFLKDKPFLAGDEISIADLSAVCEIMQPEAAGY--DVFEGRPKLAAWRKRVKEAGN 113 (126)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHhcCC--cccccCchHHHHHHHHHHhcc
Confidence 34567888889999999999999985 557899999999999999998877654333 336889999999999999 9
Q ss_pred hhHHHhhcc
Q 021153 95 PKIKKFLGD 103 (316)
Q Consensus 95 P~~k~vl~~ 103 (316)
|++++++.-
T Consensus 114 p~~~~~~~~ 122 (126)
T cd03183 114 PLFDEAHKI 122 (126)
T ss_pred hhHHHHHHH
Confidence 999997753
No 16
>cd03191 GST_C_Zeta GST_C family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates, but display modest GSH peroxidase activity. They are also implicated in the detoxification of th
Probab=99.31 E-value=1.5e-11 Score=100.57 Aligned_cols=78 Identities=22% Similarity=0.282 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhc--CCCcccCCCCCHHHHHHHHHHHHHHHhhcCccccccCchHHHHHHHHhcChhHHHh
Q 021153 23 PAEEGAVAALKRALDALNIHLA--SNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKF 100 (316)
Q Consensus 23 ~~~e~a~~~l~~~L~~LE~~L~--~~tfLvGeriTlADI~la~~L~~~~~~~~d~~~~~~yP~L~rW~~tv~a~P~~k~v 100 (316)
...+...+.+.+.|..||++|. .++||+|+++|+|||++++.+.++....++ ...+|+|.+|+++|.++|+|+++
T Consensus 40 ~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~~~~~~~~~~~~---~~~~p~l~~w~~~~~~~p~~~~~ 116 (121)
T cd03191 40 AKNAWYRHWIARGFAALEKLLAQTAGKFCFGDEPTLADICLVPQVYNARRFGVD---LSPYPTIARINEACLELPAFQAA 116 (121)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCeecCCcCCHHHHHHHHHHHHHHHhCCC---cccCcHHHHHHHHHHhChhHHHh
Confidence 3445566789999999999998 447999999999999999998876654443 57899999999999999999998
Q ss_pred hcc
Q 021153 101 LGD 103 (316)
Q Consensus 101 l~~ 103 (316)
+..
T Consensus 117 ~~~ 119 (121)
T cd03191 117 HPD 119 (121)
T ss_pred CcC
Confidence 754
No 17
>cd03186 GST_C_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.31 E-value=1.3e-11 Score=98.77 Aligned_cols=77 Identities=19% Similarity=0.199 Sum_probs=65.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHhhcCccccccCchHHHHHHHHhcChhHHHh
Q 021153 22 PPAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKF 100 (316)
Q Consensus 22 k~~~e~a~~~l~~~L~~LE~~L~~~tfLvGeriTlADI~la~~L~~~~~~~~d~~~~~~yP~L~rW~~tv~a~P~~k~v 100 (316)
++..+.+...+.+.|..||++|..++||+|+++|+|||++++.+.++....++ ....+|+|.+|+++|.++|+++++
T Consensus 30 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~~~~~~~~~--~~~~~p~l~~w~~~~~~rpa~~~~ 106 (107)
T cd03186 30 KKEAEKARKELRESLLALAPVFAHKPYFMSEEFSLVDCALAPLLWRLPALGIE--LPKQAKPLKDYMERVFARDSFQKS 106 (107)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCcHHHHHHHHHHHHHHHcCCC--CcccchHHHHHHHHHHCCHHHHHh
Confidence 56677888999999999999999999999999999999999998654422222 235799999999999999999975
No 18
>cd03189 GST_C_GTT1_like GST_C family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endopl
Probab=99.29 E-value=1.4e-11 Score=100.11 Aligned_cols=72 Identities=26% Similarity=0.335 Sum_probs=62.3
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHhhcCccccccCchHHHHHHHHhcCh
Q 021153 21 IPPAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQP 95 (316)
Q Consensus 21 nk~~~e~a~~~l~~~L~~LE~~L~~~tfLvGeriTlADI~la~~L~~~~~~~~d~~~~~~yP~L~rW~~tv~a~P 95 (316)
++...+.+...+.+.|+.||++|.+++||+|+++|+|||++++.+.++..... .+..+|+|.+|+++|.++|
T Consensus 48 ~~~~~~~~~~~~~~~l~~le~~L~~~~~l~Gd~~t~ADi~l~~~~~~~~~~~~---~~~~~p~l~~w~~~~~~~p 119 (119)
T cd03189 48 DKVLAGFINPELKKHLDFLEDRLAKKGYFVGDKLTAADIMMSFPLEAALARGP---LLEKYPNIAAYLERIEARP 119 (119)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHccCCCCCCCCCCHHHHHHHHHHHHHHHcCc---ccccCchHHHHHHHHhcCC
Confidence 35566677889999999999999999999999999999999999988754432 3688999999999999986
No 19
>cd03209 GST_C_Mu GST_C family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the m
Probab=99.29 E-value=1.8e-11 Score=100.66 Aligned_cols=85 Identities=15% Similarity=0.260 Sum_probs=72.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHhhcCccccccCchHHHHHHHHhcChhHHHhh
Q 021153 22 PPAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFL 101 (316)
Q Consensus 22 k~~~e~a~~~l~~~L~~LE~~L~~~tfLvGeriTlADI~la~~L~~~~~~~~d~~~~~~yP~L~rW~~tv~a~P~~k~vl 101 (316)
+...+.+...+.+.|..||++|.+++||+|+++|+|||++++++.++... .......||+|.+|+++|.++|++++++
T Consensus 30 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~T~aDi~l~~~~~~~~~~--~~~~~~~~P~l~~~~~rv~~~p~vk~~~ 107 (121)
T cd03209 30 EKLKPDYLAKLPDKLKLFSDFLGDRPWFAGDKITYVDFLLYEALDQHRIF--EPDCLDAFPNLKDFLERFEALPKISAYM 107 (121)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCcCCCCccHHHHHHHHHHHHHHHh--CccccccChHHHHHHHHHHHCHHHHHHH
Confidence 45566778889999999999999889999999999999999998876542 2233678999999999999999999999
Q ss_pred ccccccc
Q 021153 102 GDFKQAE 108 (316)
Q Consensus 102 ~~~~~~~ 108 (316)
...+.++
T Consensus 108 ~~~~~~~ 114 (121)
T cd03209 108 KSDRFIK 114 (121)
T ss_pred hcccCcC
Confidence 8876655
No 20
>cd03198 GST_C_CLIC GST_C family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin, and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division, and apoptosis. They can exist in both water-soluble and membrane-bound states and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and adopts a fold similar to GSTs, containing an N-terminal domain with a thioredoxin fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. T
Probab=99.29 E-value=1.9e-11 Score=103.66 Aligned_cols=84 Identities=20% Similarity=0.207 Sum_probs=68.8
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhcC----------------CCcccCCCCCHHHHHHHHHHHHHHHh---hcCcccccc
Q 021153 20 YIPPAEEGAVAALKRALDALNIHLAS----------------NTYLVGHSVTLADIVMICNLYYGFKL---IMTKSFTSE 80 (316)
Q Consensus 20 ~nk~~~e~a~~~l~~~L~~LE~~L~~----------------~tfLvGeriTlADI~la~~L~~~~~~---~~d~~~~~~ 80 (316)
.+++..+.....+.+.|..||++|.. +.||+|+++|+|||++++.+.++... ..+......
T Consensus 22 ~~~~~~e~~~~~l~~~L~~ld~~L~~~~~~~~~~~~~~~~~~~~fL~Gd~fTlADi~l~p~L~~~~~~~~~~~g~~i~~~ 101 (134)
T cd03198 22 SNPALNENLEKGLLKALKKLDDYLNSPLPDEIDSAEDEGVSQRKFLDGDELTLADCNLLPKLHIVKVVAKKYRNFEIPAD 101 (134)
T ss_pred CChhhhHHHHHHHHHHHHHHHHHHccCccccccccccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcccc
Confidence 34566788888999999999999986 67999999999999999998876321 112223478
Q ss_pred CchHHHHHHHHhcChhHHHhhcc
Q 021153 81 FPHVERYFWTVANQPKIKKFLGD 103 (316)
Q Consensus 81 yP~L~rW~~tv~a~P~~k~vl~~ 103 (316)
||+|.+|+++|.+||+|+.++..
T Consensus 102 ~P~L~aw~~ri~aRPsfk~t~~~ 124 (134)
T cd03198 102 LTGLWRYLKNAYQREEFTNTCPA 124 (134)
T ss_pred CHHHHHHHHHHHCCHHHHHHcCC
Confidence 99999999999999999998754
No 21
>cd03185 GST_C_Tau GST_C family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropi
Probab=99.28 E-value=1.6e-11 Score=100.59 Aligned_cols=83 Identities=17% Similarity=0.132 Sum_probs=69.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHh--hcCcc--ccccCchHHHHHHHHhcChhH
Q 021153 22 PPAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKL--IMTKS--FTSEFPHVERYFWTVANQPKI 97 (316)
Q Consensus 22 k~~~e~a~~~l~~~L~~LE~~L~~~tfLvGeriTlADI~la~~L~~~~~~--~~d~~--~~~~yP~L~rW~~tv~a~P~~ 97 (316)
+...+.+...+.+.|+.||++|..++||+|+++|+|||++++.+.++... ..+.. ..+.+|++.+|+++|.++|++
T Consensus 30 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~ADi~l~~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~ 109 (126)
T cd03185 30 GEEREKAKEEALEALKVLEEELGGKPFFGGDTIGYVDIALGSFLGWFRAYEEVGGVKLLDEEKTPLLAAWAERFLELEAV 109 (126)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHcCccccCcccCchHHHHHHHHHhccHH
Confidence 45667788899999999999999899999999999999999999886432 12222 257899999999999999999
Q ss_pred HHhhccc
Q 021153 98 KKFLGDF 104 (316)
Q Consensus 98 k~vl~~~ 104 (316)
++++...
T Consensus 110 ~~~~~~~ 116 (126)
T cd03185 110 KEVLPDR 116 (126)
T ss_pred HHhCCCH
Confidence 9987654
No 22
>cd03201 GST_C_DHAR GST_C family, Dehydroascorbate Reductase (DHAR) subfamily; composed of plant-specific DHARs, monomeric enzymes catalyzing the reduction of DHA into ascorbic acid (AsA) using glutathione as the reductant. DHAR allows plants to recycle oxidized AsA before it is lost. AsA serves as a cofactor of violaxanthin de-epoxidase in the xanthophyll cycle and as an antioxidant in the detoxification of reactive oxygen species. Because AsA is the major reductant in plants, DHAR serves to regulate their redox state. It has been suggested that a significant portion of DHAR activity is plastidic, acting to reduce the large amounts of ascorbate oxidized during hydrogen peroxide scavenging by ascorbate peroxidase. DHAR contains a conserved cysteine in its active site and in addition to its reductase activity, shows thiol transferase activity similar to glutaredoxins.
Probab=99.25 E-value=2.5e-11 Score=100.80 Aligned_cols=78 Identities=21% Similarity=0.268 Sum_probs=63.7
Q ss_pred HHHHHHHHHHHHHHHHHhcC-CCcccCCCCCHHHHHHHHHHHHHHHh-h--cCccccccCchHHHHHHHHhcChhHHHhh
Q 021153 26 EGAVAALKRALDALNIHLAS-NTYLVGHSVTLADIVMICNLYYGFKL-I--MTKSFTSEFPHVERYFWTVANQPKIKKFL 101 (316)
Q Consensus 26 e~a~~~l~~~L~~LE~~L~~-~tfLvGeriTlADI~la~~L~~~~~~-~--~d~~~~~~yP~L~rW~~tv~a~P~~k~vl 101 (316)
+.+.+.+.+.|..||.+|.. ++||+|+++|+|||++++.+.++... . .+......+|+|.+|+++|.+||+|++++
T Consensus 29 ~~~~~~l~~~l~~Le~~L~~~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~P~l~~w~~rl~~rps~~~t~ 108 (121)
T cd03201 29 DGTEQALLDELEALEDHLKENGPFINGEKISAVDLSLAPKLYHLEIALGHYKNWSVPESLTSVKSYMKALFSRESFVKTK 108 (121)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCccCCCCCCHHhHHHHHHHHHHHHHHHHhcCCCCcccchHHHHHHHHHHCCchhhhcC
Confidence 56778899999999999984 79999999999999999988766422 1 12112478999999999999999999976
Q ss_pred cc
Q 021153 102 GD 103 (316)
Q Consensus 102 ~~ 103 (316)
..
T Consensus 109 ~~ 110 (121)
T cd03201 109 AE 110 (121)
T ss_pred CC
Confidence 53
No 23
>PF13410 GST_C_2: Glutathione S-transferase, C-terminal domain; PDB: 4DEJ_H 3IC8_A 2JL4_A 2V6K_B 3CBU_B 1JLW_B 3F6D_B 3G7I_A 3F63_A 3G7J_B ....
Probab=99.24 E-value=3.2e-11 Score=89.29 Aligned_cols=68 Identities=31% Similarity=0.364 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHhhcCccccccCchHHHHHHH
Q 021153 23 PAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWT 90 (316)
Q Consensus 23 ~~~e~a~~~l~~~L~~LE~~L~~~tfLvGeriTlADI~la~~L~~~~~~~~d~~~~~~yP~L~rW~~t 90 (316)
.+++.+.+.+.+.|+.||++|.+++||+|+++|+|||++++.+.++.....+..++..+|+|.+|++|
T Consensus 2 ~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~r 69 (69)
T PF13410_consen 2 AAVERARAQLEAALDALEDHLADGPFLFGDRPSLADIALAPFLWRLRFVGPDFDLLEAYPNLRAWYER 69 (69)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSSBTTBSS--HHHHHHHHHHHHHHHCTHTCCHHTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHHhCcCcCccccCHHHHHHHhC
Confidence 56789999999999999999999999999999999999999999887665444567899999999986
No 24
>cd03190 GST_C_ECM4_like GST_C family, ECM4-like subfamily; composed of predominantly uncharacterized and taxonomically diverse proteins with similarity to the translation product of the Saccharomyces cerevisiae gene ECM4. ECM4, a gene of unknown function, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.
Probab=99.24 E-value=3e-11 Score=102.62 Aligned_cols=85 Identities=24% Similarity=0.274 Sum_probs=71.0
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHh---hc--CccccccCchHHHHHHHHhc
Q 021153 19 QYIPPAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKL---IM--TKSFTSEFPHVERYFWTVAN 93 (316)
Q Consensus 19 p~nk~~~e~a~~~l~~~L~~LE~~L~~~tfLvGeriTlADI~la~~L~~~~~~---~~--d~~~~~~yP~L~rW~~tv~a 93 (316)
..+++..+.+...+.+.|+.||++|.+++||+|+++|+|||++++.+.++... .. +...+..||+|.+|+++|.+
T Consensus 29 ~~~~~~~~~~~~~l~~~l~~LE~~L~~~~yl~Gd~~TlADi~l~~~l~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~ 108 (142)
T cd03190 29 ATTQEAYDEAVDELFEALDRLEELLSDRRYLLGDRLTEADIRLFTTLIRFDAVYVQHFKCNLKRIRDYPNLWNYLRRLYQ 108 (142)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHccCCeeeCCCccHHHHHHHHHHHHHHHHhhhhcccccchhhhCchHHHHHHHHhc
Confidence 35677788899999999999999999899999999999999999998765321 11 11235689999999999999
Q ss_pred ChhHHHhhcc
Q 021153 94 QPKIKKFLGD 103 (316)
Q Consensus 94 ~P~~k~vl~~ 103 (316)
+|++++++..
T Consensus 109 ~P~~k~~~~~ 118 (142)
T cd03190 109 NPGVAETTNF 118 (142)
T ss_pred CchHhhhcCH
Confidence 9999998775
No 25
>PLN02395 glutathione S-transferase
Probab=99.23 E-value=3.8e-11 Score=107.43 Aligned_cols=87 Identities=21% Similarity=0.288 Sum_probs=71.4
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHhhcCccccccCchHHHHHHHHhcChhHH
Q 021153 19 QYIPPAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIK 98 (316)
Q Consensus 19 p~nk~~~e~a~~~l~~~L~~LE~~L~~~tfLvGeriTlADI~la~~L~~~~~~~~d~~~~~~yP~L~rW~~tv~a~P~~k 98 (316)
+.+.+..+...+.+.+.++.||++|++++||+|+++|+|||++++.+.+.........++..+|+|.+|+++|.++|+++
T Consensus 126 ~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~ADi~l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~rp~~k 205 (215)
T PLN02395 126 PADEKVIKESEEKLAKVLDVYEARLSKSKYLAGDFVSLADLAHLPFTEYLVGPIGKAYLIKDRKHVSAWWDDISSRPAWK 205 (215)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCcCHHHHHHHHHHHHHhcccchhhhhccCchHHHHHHHHHcChHHH
Confidence 33456677788899999999999999889999999999999999888765322111224678999999999999999999
Q ss_pred Hhhcccc
Q 021153 99 KFLGDFK 105 (316)
Q Consensus 99 ~vl~~~~ 105 (316)
+++....
T Consensus 206 ~~~~~~~ 212 (215)
T PLN02395 206 EVLAKYS 212 (215)
T ss_pred HHHHHhc
Confidence 9987664
No 26
>PLN02473 glutathione S-transferase
Probab=99.23 E-value=3.2e-11 Score=107.95 Aligned_cols=84 Identities=21% Similarity=0.305 Sum_probs=70.0
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHhhcCccccccCchHHHHHHHHhcChhHHH
Q 021153 20 YIPPAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKK 99 (316)
Q Consensus 20 ~nk~~~e~a~~~l~~~L~~LE~~L~~~tfLvGeriTlADI~la~~L~~~~~~~~d~~~~~~yP~L~rW~~tv~a~P~~k~ 99 (316)
.+....+....++.+.|+.||++|++++|++|+++|+|||++++.+.++........+++.||+|.+|+++|.++|++++
T Consensus 128 ~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~Gd~~t~ADi~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p~~~~ 207 (214)
T PLN02473 128 CDVALVEELKVKFDKVLDVYENRLATNRYLGGDEFTLADLTHMPGMRYIMNETSLSGLVTSRENLNRWWNEISARPAWKK 207 (214)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHhccCCcccCCCCCHHHHHHHHHHHHHHhccccHHHHhcCHHHHHHHHHHhcChhhHH
Confidence 34566777888999999999999998899999999999999999998764322112346889999999999999999999
Q ss_pred hhcc
Q 021153 100 FLGD 103 (316)
Q Consensus 100 vl~~ 103 (316)
++..
T Consensus 208 ~~~~ 211 (214)
T PLN02473 208 LMEL 211 (214)
T ss_pred HHHH
Confidence 8754
No 27
>cd03210 GST_C_Pi GST_C family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an incre
Probab=99.22 E-value=9.4e-11 Score=97.25 Aligned_cols=85 Identities=18% Similarity=0.330 Sum_probs=70.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcC---CCcccCCCCCHHHHHHHHHHHHHHHhhcCccccccCchHHHHHHHHhcChhHH
Q 021153 22 PPAEEGAVAALKRALDALNIHLAS---NTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIK 98 (316)
Q Consensus 22 k~~~e~a~~~l~~~L~~LE~~L~~---~tfLvGeriTlADI~la~~L~~~~~~~~d~~~~~~yP~L~rW~~tv~a~P~~k 98 (316)
+...+.....+.+.|..||++|.+ ++||+|+++|+|||++++++.++... .......||+|.+|+++|.++|+|+
T Consensus 30 ~~~~~~~~~~~~~~l~~le~~L~~~~~~~~l~G~~~T~ADi~l~~~~~~~~~~--~~~~~~~~P~l~~~~~rv~~~p~v~ 107 (126)
T cd03210 30 EAGKDDYIKDLPEQLKPFEKLLSKNNGKGFIVGDKISFADYNLFDLLDIHLVL--APGCLDAFPLLKAFVERLSARPKLK 107 (126)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCccHHHHHHHHHHHHHHHh--ChHhhhcChHHHHHHHHHHhCcHHH
Confidence 345567778899999999999975 48999999999999999998776532 1223678999999999999999999
Q ss_pred Hhhccccccc
Q 021153 99 KFLGDFKQAE 108 (316)
Q Consensus 99 ~vl~~~~~~~ 108 (316)
+++.......
T Consensus 108 ~~~~~~~~~~ 117 (126)
T cd03210 108 AYLESDAFKN 117 (126)
T ss_pred HHHhCcCCCC
Confidence 9998877665
No 28
>cd03184 GST_C_Omega GST_C family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a re
Probab=99.21 E-value=5.4e-11 Score=98.18 Aligned_cols=83 Identities=20% Similarity=0.316 Sum_probs=69.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcC--CCcccCCCCCHHHHHHHHHHHHHHHhhcC---ccccccCchHHHHHHHHhcChh
Q 021153 22 PPAEEGAVAALKRALDALNIHLAS--NTYLVGHSVTLADIVMICNLYYGFKLIMT---KSFTSEFPHVERYFWTVANQPK 96 (316)
Q Consensus 22 k~~~e~a~~~l~~~L~~LE~~L~~--~tfLvGeriTlADI~la~~L~~~~~~~~d---~~~~~~yP~L~rW~~tv~a~P~ 96 (316)
++..+.+.+.+.+.|+.||++|.+ ++|++|+++|+|||++++.+.++...... ...++.+|+|.+|+++|.++|+
T Consensus 27 ~~~~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~r~~~~p~ 106 (124)
T cd03184 27 PSDREEKKAELRSALENLEEELTKRGTPFFGGDSPGMVDYMIWPWFERLEALKLLLGYEFPLDRFPKLKKWMDAMKEDPA 106 (124)
T ss_pred cccchhhHHHHHHHHHHHHHHHHhcCCCCcCCCCccHHHHHhhHHHHHHHHHHhhccccCCcccChHHHHHHHHhccChH
Confidence 556678899999999999999985 79999999999999999999876543211 1126789999999999999999
Q ss_pred HHHhhccc
Q 021153 97 IKKFLGDF 104 (316)
Q Consensus 97 ~k~vl~~~ 104 (316)
++.++.+.
T Consensus 107 v~~~~~~~ 114 (124)
T cd03184 107 VQAFYTDT 114 (124)
T ss_pred HHHHhCCH
Confidence 99998764
No 29
>PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional
Probab=99.21 E-value=5.4e-11 Score=106.94 Aligned_cols=84 Identities=19% Similarity=0.220 Sum_probs=69.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHhhcCccccccCchHHHHHHHHhcChhHHHhh
Q 021153 22 PPAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFL 101 (316)
Q Consensus 22 k~~~e~a~~~l~~~L~~LE~~L~~~tfLvGeriTlADI~la~~L~~~~~~~~d~~~~~~yP~L~rW~~tv~a~P~~k~vl 101 (316)
+...+.....+.+.|..||++|.+++||+|+++|+|||++++.+.......++ ...||+|.+|+++|.++|++++++
T Consensus 127 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~Gd~~t~ADi~l~~~~~~~~~~~~~---~~~~P~l~~w~~r~~~rp~~~~~~ 203 (215)
T PRK13972 127 PYAIERYQVETQRLYHVLNKRLENSPWLGGENYSIADIACWPWVNAWTRQRID---LAMYPAVKNWHERIRSRPATGQAL 203 (215)
T ss_pred chHHHHHHHHHHHHHHHHHHHhccCccccCCCCCHHHHHHHHHHHHHhhcCCc---chhCHHHHHHHHHHHhCHHHHHHH
Confidence 45567777889999999999999889999999999999998877554433333 578999999999999999999988
Q ss_pred ccccccc
Q 021153 102 GDFKQAE 108 (316)
Q Consensus 102 ~~~~~~~ 108 (316)
....+-+
T Consensus 204 ~~~~~~~ 210 (215)
T PRK13972 204 LKAQLGD 210 (215)
T ss_pred HHhcccc
Confidence 7665543
No 30
>PRK10542 glutathionine S-transferase; Provisional
Probab=99.13 E-value=1.7e-10 Score=102.10 Aligned_cols=77 Identities=19% Similarity=0.380 Sum_probs=66.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHhhcCccccccCchHHHHHHHHhcChhHHHhhcc
Q 021153 24 AEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFLGD 103 (316)
Q Consensus 24 ~~e~a~~~l~~~L~~LE~~L~~~tfLvGeriTlADI~la~~L~~~~~~~~d~~~~~~yP~L~rW~~tv~a~P~~k~vl~~ 103 (316)
..+...+.+.+.|..||++|.+++||+|+++|+|||++++.+.+.....++ ...+|+|.+|+++|.++|+|++++..
T Consensus 121 ~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~ADi~l~~~~~~~~~~~~~---~~~~p~l~~w~~~~~~~p~~k~~~~~ 197 (201)
T PRK10542 121 YKPTVRAQLEKKFQYVDEALADEQWICGQRFTIADAYLFTVLRWAYAVKLN---LEGLEHIAAYMQRVAERPAVAAALKA 197 (201)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeeeCCCCcHHhHHHHHHHHHhhccCCC---cccchHHHHHHHHHHcCHHHHHHHHH
Confidence 345667889999999999999899999999999999999998876544433 56899999999999999999998754
No 31
>cd03208 GST_C_Alpha GST_C family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Alpha subfamily is composed of vertebrate GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GS
Probab=99.13 E-value=4.1e-10 Score=95.33 Aligned_cols=76 Identities=28% Similarity=0.375 Sum_probs=64.0
Q ss_pred HHHHHHHHHHHHHHhc--CCCcccCCCCCHHHHHHHHHHHHHHHhhcCccccccCchHHHHHHHHhcChhHHHhhccccc
Q 021153 29 VAALKRALDALNIHLA--SNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFLGDFKQ 106 (316)
Q Consensus 29 ~~~l~~~L~~LE~~L~--~~tfLvGeriTlADI~la~~L~~~~~~~~d~~~~~~yP~L~rW~~tv~a~P~~k~vl~~~~~ 106 (316)
...+.+.|+.||++|. ++.||+|+++|+|||++++.+.++.... ...+..||+|.+|+++|.++|++++++.....
T Consensus 41 ~~~~~~~l~~lE~~L~~~~~~~l~G~~~T~ADi~l~~~l~~~~~~~--~~~l~~~P~l~~~~~rv~~~P~vk~~~~~~~~ 118 (137)
T cd03208 41 EKAKNRYFPVFEKVLKSHGQDFLVGNKLSRADIHLLEAILMVEELD--PSLLSDFPLLQAFKTRISNLPTIKKFLQPGSP 118 (137)
T ss_pred HHHHHHHHHHHHHHHHhCCCCeeeCCCCCHHHHHHHHHHHHHHHhc--hhhhccChHHHHHHHHHHcCHHHHHHHhcCCC
Confidence 3466899999999998 6789999999999999999998765422 23467899999999999999999999876543
No 32
>TIGR01262 maiA maleylacetoacetate isomerase. Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism.
Probab=99.12 E-value=2.4e-10 Score=101.75 Aligned_cols=77 Identities=18% Similarity=0.301 Sum_probs=65.3
Q ss_pred HHHHHHHHHHHHHHHHHHhcCC--CcccCCCCCHHHHHHHHHHHHHHHhhcCccccccCchHHHHHHHHhcChhHHHhhc
Q 021153 25 EEGAVAALKRALDALNIHLASN--TYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFLG 102 (316)
Q Consensus 25 ~e~a~~~l~~~L~~LE~~L~~~--tfLvGeriTlADI~la~~L~~~~~~~~d~~~~~~yP~L~rW~~tv~a~P~~k~vl~ 102 (316)
.+.+.+.+.+.|+.||++|.++ .||+|+++|+|||++++.+.++....++ .+.||+|.+|+++|.++|++++++.
T Consensus 127 ~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~ADi~~~~~l~~~~~~~~~---~~~~p~l~~~~~~~~~rp~~~~~~~ 203 (210)
T TIGR01262 127 NRWYQHWISKGFAALEALLQPHAGAFCVGDTPTLADLCLVPQVYNAERFGVD---LTPYPTLRRIAAALAALPAFQRAHP 203 (210)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCEeeCCCCCHHHHHHHHHHHHHHHcCCC---cccchHHHHHHHHHhcCHHHHHhCc
Confidence 4446677999999999999864 4999999999999999999887644333 5789999999999999999999886
Q ss_pred cc
Q 021153 103 DF 104 (316)
Q Consensus 103 ~~ 104 (316)
..
T Consensus 204 ~~ 205 (210)
T TIGR01262 204 EN 205 (210)
T ss_pred cc
Confidence 54
No 33
>PRK10357 putative glutathione S-transferase; Provisional
Probab=99.12 E-value=3.1e-10 Score=100.73 Aligned_cols=81 Identities=20% Similarity=0.207 Sum_probs=68.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHhhcCccccccCchHHHHHHHHhcChhHHHhh
Q 021153 22 PPAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFL 101 (316)
Q Consensus 22 k~~~e~a~~~l~~~L~~LE~~L~~~tfLvGeriTlADI~la~~L~~~~~~~~d~~~~~~yP~L~rW~~tv~a~P~~k~vl 101 (316)
.+..+.....+.+.|+.||++|.++. |+|+++|+|||++++.+.++.....+..+...||+|.+|+++|.++|+|+++.
T Consensus 120 ~~~~~~~~~~l~~~l~~le~~L~~~~-l~Gd~~t~ADi~l~~~l~~~~~~~~~~~~~~~~p~l~~~~~~i~~rp~~~~~~ 198 (202)
T PRK10357 120 EDELLRQREKINRSLDALEGYLVDGT-LKTDTVNLATIAIACAVGYLNFRRVAPGWCVDRPHLVKLVENLFQRESFARTE 198 (202)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCc-ccCCCcCHHHHHHHHHHHHHHhcccCcchhhcChHHHHHHHHHhcChhhhhcC
Confidence 45566778899999999999998878 99999999999999999876543334445678999999999999999999876
Q ss_pred cc
Q 021153 102 GD 103 (316)
Q Consensus 102 ~~ 103 (316)
+.
T Consensus 199 ~~ 200 (202)
T PRK10357 199 PP 200 (202)
T ss_pred CC
Confidence 53
No 34
>cd03179 GST_C_1 GST_C family, unknown subfamily 1; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.10 E-value=1.4e-10 Score=91.66 Aligned_cols=72 Identities=19% Similarity=0.221 Sum_probs=61.7
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHhhcCccccccCchHHHHHHHHh
Q 021153 18 MQYIPPAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVA 92 (316)
Q Consensus 18 ~p~nk~~~e~a~~~l~~~L~~LE~~L~~~tfLvGeriTlADI~la~~L~~~~~~~~d~~~~~~yP~L~rW~~tv~ 92 (316)
.+.+++..+.+..++.+.++.||.+|++++|++|+++|+|||++++.+.++....++ ...+|+|.+|+++|.
T Consensus 34 ~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~g~~~slaDi~~~~~~~~~~~~~~~---~~~~p~l~~~~~~~~ 105 (105)
T cd03179 34 GEADAEVLAFLRERGHAALAVLEAHLAGRDFLVGDALTIADIALAAYTHVADEGGFD---LADYPAIRAWLARIE 105 (105)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHccCccccCCCCCHHHHHHHHHHHhccccCCC---hHhCccHHHHHHhhC
Confidence 345567888999999999999999998889999999999999999999886544333 578999999999873
No 35
>PRK09481 sspA stringent starvation protein A; Provisional
Probab=99.09 E-value=4.1e-10 Score=101.17 Aligned_cols=81 Identities=15% Similarity=0.167 Sum_probs=68.0
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHhhcCcccc-ccCchHHHHHHHHhcChhHHH
Q 021153 21 IPPAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFT-SEFPHVERYFWTVANQPKIKK 99 (316)
Q Consensus 21 nk~~~e~a~~~l~~~L~~LE~~L~~~tfLvGeriTlADI~la~~L~~~~~~~~d~~~~-~~yP~L~rW~~tv~a~P~~k~ 99 (316)
++...+.+...+...|..||++|.+++||+|+++|+|||++++.+.+.....++ +. ..||+|.+|+++|.++|++++
T Consensus 121 ~~~~~~~~~~~l~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~~~~~~~~~~~--~~~~~~p~l~~w~~~~~~rp~~~~ 198 (211)
T PRK09481 121 SASEADAARKQLREELLAIAPVFGEKPYFMSEEFSLVDCYLAPLLWRLPVLGIE--LSGPGAKELKGYMTRVFERDSFLA 198 (211)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhccCCcccCCCccHHHHHHHHHHHHHHhcCCC--CCCCCChhHHHHHHHHhccHHHHH
Confidence 345667788889999999999999999999999999999999998776543333 22 579999999999999999998
Q ss_pred hhcc
Q 021153 100 FLGD 103 (316)
Q Consensus 100 vl~~ 103 (316)
++..
T Consensus 199 ~~~~ 202 (211)
T PRK09481 199 SLTE 202 (211)
T ss_pred HcCH
Confidence 8753
No 36
>cd03203 GST_C_Lambda GST_C family, Class Lambda subfamily; composed of plant-specific class Lambda GSTs. GSTs are cytosolic, usually dimeric, proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Lambda subfamily was recently discovered, together with dehydroascorbate reductases (DHARs), as two outlying groups of the GST superfamily in Arabidopsis thaliana, which contain conserved active site cysteines. Characterization of recombinant A. thaliana proteins show that Lambda class GSTs are monomeric, similar
Probab=99.06 E-value=5.9e-10 Score=91.95 Aligned_cols=72 Identities=15% Similarity=0.181 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHhc---CCCcccCCCCCHHHHHHHHHHHHHHH---hhcCccccccCchHHHHHHHHhcChhHHHhhcc
Q 021153 31 ALKRALDALNIHLA---SNTYLVGHSVTLADIVMICNLYYGFK---LIMTKSFTSEFPHVERYFWTVANQPKIKKFLGD 103 (316)
Q Consensus 31 ~l~~~L~~LE~~L~---~~tfLvGeriTlADI~la~~L~~~~~---~~~d~~~~~~yP~L~rW~~tv~a~P~~k~vl~~ 103 (316)
++.+.++.||++|. +++|++| ++|+|||++++.+.++.. ...+.++...+|+|.+|+++|.++|+++++..+
T Consensus 34 ~~~~~l~~Le~~L~~~~~~~fl~G-~~tlADi~l~~~~~~~~~~~~~~~~~~~~~~~P~l~~W~~~~~~rp~~~~~~~~ 111 (120)
T cd03203 34 EAAAALDYIENALSKFDDGPFFLG-QFSLVDIAYVPFIERFQIFLSELFNYDITEGRPNLAAWIEEMNKIEAYTQTKQD 111 (120)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcCC-CccHHHHHHHHHHHHHHHHHHHhcCccccccCcHHHHHHHHHhcchHHHhHcCC
Confidence 34667788888886 4799999 999999999999976542 112323446899999999999999999998764
No 37
>cd03194 GST_C_3 GST_C family, unknown subfamily 3; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.06 E-value=1.1e-09 Score=89.73 Aligned_cols=71 Identities=15% Similarity=0.209 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHHHHHh---cCCCcccCCCCCHHHHHHHHHHHHHHHhhcCccccccCchHHHHHHHHhcChhHHHhhc
Q 021153 26 EGAVAALKRALDALNIHL---ASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFLG 102 (316)
Q Consensus 26 e~a~~~l~~~L~~LE~~L---~~~tfLvGeriTlADI~la~~L~~~~~~~~d~~~~~~yP~L~rW~~tv~a~P~~k~vl~ 102 (316)
+.+...+.+.++.||..| .+++||+|+ +|+|||++++++.++....++ ..|+|.+|+++|.++|++++.+.
T Consensus 40 ~~~~~~~~~~~~~le~~l~~~~~~~yl~Gd-~T~ADi~l~~~~~~~~~~~~~-----~~P~l~~~~~rv~~rPsv~~~~~ 113 (114)
T cd03194 40 EAVQADIARIEAIWAECLARFQGGPFLFGD-FSIADAFFAPVVTRFRTYGLP-----LSPAAQAYVDALLAHPAMQEWIA 113 (114)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCCC-CcHHHHHHHHHHHHHHHcCCC-----CCHHHHHHHHHHHCCHHHHHHHh
Confidence 344444455555555544 567899999 999999999999887543332 23999999999999999998764
No 38
>cd00299 GST_C_family Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an activ
Probab=99.05 E-value=4.5e-10 Score=86.88 Aligned_cols=71 Identities=30% Similarity=0.277 Sum_probs=60.8
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHhhcCccccccCchHHHHHHHH
Q 021153 21 IPPAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTV 91 (316)
Q Consensus 21 nk~~~e~a~~~l~~~L~~LE~~L~~~tfLvGeriTlADI~la~~L~~~~~~~~d~~~~~~yP~L~rW~~tv 91 (316)
+++..+...+.+.+.++.||++|+.+.|++|+++|+|||++++.+.++........++..+|+|.+|+++|
T Consensus 30 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~ 100 (100)
T cd00299 30 DEAALEEAREELAAALAALEKLLAGRPYLAGDRFSLADIALAPVLARLDLLGPLLGLLDEYPRLAAWYDRL 100 (100)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCcCHHHHHHHHHHHHHHHhhhhhhhhccCccHHHHHHhC
Confidence 46778888999999999999999999999999999999999999998766543322467899999999875
No 39
>PTZ00057 glutathione s-transferase; Provisional
Probab=99.05 E-value=5e-10 Score=100.26 Aligned_cols=80 Identities=20% Similarity=0.194 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCC--CcccCCCCCHHHHHHHHHHHHHHHhhcCccccccCchHHHHHHHHhcChhHHHhh
Q 021153 24 AEEGAVAALKRALDALNIHLASN--TYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFL 101 (316)
Q Consensus 24 ~~e~a~~~l~~~L~~LE~~L~~~--tfLvGeriTlADI~la~~L~~~~~~~~d~~~~~~yP~L~rW~~tv~a~P~~k~vl 101 (316)
..+...+.+.+.|..||++|+++ +||+|+++|+|||++++.+.+.... + +..+..||+|.+|+++|.++|++++++
T Consensus 120 ~~~~~~~~~~~~l~~le~~L~~~~~~~l~Gd~~T~AD~~l~~~~~~~~~~-~-~~~l~~~P~l~~~~~r~~~~P~~k~y~ 197 (205)
T PTZ00057 120 ETTFLNEELPKWSGYFENILKKNHCNYFVGDNLTYADLAVFNLYDDIETK-Y-PNSLKNFPLLKAHNEFISNLPNIKNYI 197 (205)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCeeeCCcccHHHHHHHHHHHHHHHh-C-hhhhccChhHHHHHHHHHhChHHHHHH
Confidence 33456678999999999999764 7999999999999999988775421 2 122689999999999999999999998
Q ss_pred cccc
Q 021153 102 GDFK 105 (316)
Q Consensus 102 ~~~~ 105 (316)
...+
T Consensus 198 ~~~~ 201 (205)
T PTZ00057 198 SNRK 201 (205)
T ss_pred HhCC
Confidence 7653
No 40
>cd03195 GST_C_4 GST_C family, unknown subfamily 4; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.00 E-value=1.6e-09 Score=88.54 Aligned_cols=73 Identities=18% Similarity=0.154 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhc-CCCcccCCCCCHHHHHHHHHHHHHHHhhcCccccccCchHHHHHHHHhcChhHHHhhc
Q 021153 24 AEEGAVAALKRALDALNIHLA-SNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFLG 102 (316)
Q Consensus 24 ~~e~a~~~l~~~L~~LE~~L~-~~tfLvGeriTlADI~la~~L~~~~~~~~d~~~~~~yP~L~rW~~tv~a~P~~k~vl~ 102 (316)
..+.+...+.+.+..||.+|. +++||+| ++|+|||++++++.|+....++ +. |++.+|.++|.+||+|++++.
T Consensus 39 ~~~~~~~~~~~~~~~le~~l~~~~~~l~G-~fSiAD~~l~~~~~~~~~~g~~---l~--p~l~ay~~r~~~rPa~~~~~~ 112 (114)
T cd03195 39 LSEAAQAAAEKLIAVAEALLPPGAANLFG-EWCIADTDLALMLNRLVLNGDP---VP--ERLRDYARRQWQRPSVQAWLA 112 (114)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCCcccC-CccHHHHHHHHHHHHHHHcCCC---CC--HHHHHHHHHHHCCHHHHHHHh
Confidence 556788889999999999995 5589999 5999999999999998776665 33 999999999999999999874
No 41
>PLN02378 glutathione S-transferase DHAR1
Probab=98.98 E-value=7.4e-10 Score=99.96 Aligned_cols=82 Identities=27% Similarity=0.361 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHHHHHHHhc--CCCcccCCCCCHHHHHHHHHHHHHHHh---hcCccccccCchHHHHHHHHhcChhHHHh
Q 021153 26 EGAVAALKRALDALNIHLA--SNTYLVGHSVTLADIVMICNLYYGFKL---IMTKSFTSEFPHVERYFWTVANQPKIKKF 100 (316)
Q Consensus 26 e~a~~~l~~~L~~LE~~L~--~~tfLvGeriTlADI~la~~L~~~~~~---~~d~~~~~~yP~L~rW~~tv~a~P~~k~v 100 (316)
+.+...+.+.|..||++|. +++||+|+++|+|||++++.+.++... .......+.||+|.+|+++|.++|+++++
T Consensus 117 ~~~~~~~~~~l~~le~~L~~~~~~fl~Gd~~T~ADi~l~~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~rpa~~~~ 196 (213)
T PLN02378 117 DGSEHALLVELEALENHLKSHDGPFIAGERVSAVDLSLAPKLYHLQVALGHFKSWSVPESFPHVHNYMKTLFSLDSFEKT 196 (213)
T ss_pred hHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCchhhHHHHHHHHHHHHHHHHhcCCCchhHhHHHHHHHHHHhcCCCeecc
Confidence 3445678888999999998 468999999999999999998775321 11112357899999999999999999988
Q ss_pred hcccccc
Q 021153 101 LGDFKQA 107 (316)
Q Consensus 101 l~~~~~~ 107 (316)
+..-.++
T Consensus 197 ~~~~~~~ 203 (213)
T PLN02378 197 KTEEKYV 203 (213)
T ss_pred cCChHHH
Confidence 7765444
No 42
>COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.98 E-value=2.8e-09 Score=95.41 Aligned_cols=75 Identities=27% Similarity=0.387 Sum_probs=66.4
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHhhcCccccccCchHHHHHHHHhcChhHH
Q 021153 21 IPPAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIK 98 (316)
Q Consensus 21 nk~~~e~a~~~l~~~L~~LE~~L~~~tfLvGeriTlADI~la~~L~~~~~~~~d~~~~~~yP~L~rW~~tv~a~P~~k 98 (316)
+....+.+.+.+.+.+..||.+|..++||+|+++|+|||++++.+.++.....+ .+.+|+|.+|+++|.++|.++
T Consensus 125 ~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~tiAD~~~~~~~~~~~~~~~~---~~~~p~l~~w~~r~~~rp~~~ 199 (211)
T COG0625 125 LEAALEAARAEIRALLALLEALLADGPYLAGDRFTIADIALAPLLWRLALLGEE---LADYPALKAWYERVLARPAFR 199 (211)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhccCCcccCCCCCHHHHHHHHHHHHhhhcCcc---cccChHHHHHHHHHHcCCchh
Confidence 467788899999999999999999999999999999999999999885544433 378999999999999999965
No 43
>PRK11752 putative S-transferase; Provisional
Probab=98.95 E-value=2.7e-09 Score=99.74 Aligned_cols=82 Identities=24% Similarity=0.207 Sum_probs=66.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHhh-cC-cc--ccccCchHHHHHHHHhcChhHH
Q 021153 23 PAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLI-MT-KS--FTSEFPHVERYFWTVANQPKIK 98 (316)
Q Consensus 23 ~~~e~a~~~l~~~L~~LE~~L~~~tfLvGeriTlADI~la~~L~~~~~~~-~d-~~--~~~~yP~L~rW~~tv~a~P~~k 98 (316)
...+....++.+.|+.||++|.+++||+|+++|+|||++++.+.++.... ++ .. .+..||+|.+|+++|.++|+++
T Consensus 174 ~~~~~~~~~~~~~L~~le~~L~~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~~P~L~~w~~rv~~rPs~k 253 (264)
T PRK11752 174 YAINRFTMEAKRQLDVLDKQLAEHEYIAGDEYTIADIAIWPWYGNLVLGNLYDAAEFLDVGSYKHVQRWAKEIAERPAVK 253 (264)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCCCCccCHHHHHHHHHHHHHhhccccccccccCcccCHHHHHHHHHHHhCHHHH
Confidence 45566777899999999999998899999999999999998886653211 11 01 1578999999999999999999
Q ss_pred Hhhccc
Q 021153 99 KFLGDF 104 (316)
Q Consensus 99 ~vl~~~ 104 (316)
+++...
T Consensus 254 ~~~~~~ 259 (264)
T PRK11752 254 RGRIVN 259 (264)
T ss_pred HHHhcc
Confidence 987543
No 44
>cd03192 GST_C_Sigma_like GST_C family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi, and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition
Probab=98.94 E-value=1e-09 Score=87.14 Aligned_cols=69 Identities=26% Similarity=0.310 Sum_probs=58.7
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhcC--CCcccCCCCCHHHHHHHHHHHHHHHhhcCccc-cccCchHHHHHHHH
Q 021153 21 IPPAEEGAVAALKRALDALNIHLAS--NTYLVGHSVTLADIVMICNLYYGFKLIMTKSF-TSEFPHVERYFWTV 91 (316)
Q Consensus 21 nk~~~e~a~~~l~~~L~~LE~~L~~--~tfLvGeriTlADI~la~~L~~~~~~~~d~~~-~~~yP~L~rW~~tv 91 (316)
.+.......+.+.+.++.||++|.+ ++|++|+++|+|||++++.+.++... ++.. +..||+|.+|+++|
T Consensus 33 ~~~~~~~~~~~~~~~l~~le~~l~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~--~~~~~~~~~p~l~~~~~~~ 104 (104)
T cd03192 33 KEKKKEFLKEAIPKYLKKLEKILKENGGGYLVGDKLTWADLVVFDVLDYLLYL--DPKLLLKKYPKLKALRERV 104 (104)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHcCCCeeeCCCccHHHHHHHHHHHHHHhh--CchhhHHhChhHHHHHHhC
Confidence 4677788889999999999999987 89999999999999999999887543 2233 67899999999874
No 45
>KOG0867 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.91 E-value=2.9e-09 Score=97.56 Aligned_cols=95 Identities=25% Similarity=0.337 Sum_probs=79.5
Q ss_pred HHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHhhcCccccccCchHHHH
Q 021153 8 SRWVYPRLGYMQYIPPAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERY 87 (316)
Q Consensus 8 ~~w~~p~~G~~p~nk~~~e~a~~~l~~~L~~LE~~L~~~tfLvGeriTlADI~la~~L~~~~~~~~d~~~~~~yP~L~rW 87 (316)
..++.|++...+.+..........+.++++.+|.+|.++.|++|+++|+|||.+++.+..+.....+.....+||++.||
T Consensus 114 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~~yl~g~~~tlADl~~~~~~~~~~~~~~~~~~~~~~p~v~~W 193 (226)
T KOG0867|consen 114 RPILAPLLVGLPLNPTAVKELEAKLRKALDNLERFLKTQVYLAGDQLTLADLSLASTLSQFQGKFATEKDFEKYPKVARW 193 (226)
T ss_pred ceeeecceecccCcchhhHHHHHHHHHHHHHHHHHHccCCcccCCcccHHHHHHhhHHHHHhHhhhhhhhhhhChHHHHH
Confidence 35566755555778899999999999999999999999999999999999999999998874222234568899999999
Q ss_pred HHHHhcChhHHHhhc
Q 021153 88 FWTVANQPKIKKFLG 102 (316)
Q Consensus 88 ~~tv~a~P~~k~vl~ 102 (316)
++++.++|+++++..
T Consensus 194 ~~~~~~~P~~~e~~~ 208 (226)
T KOG0867|consen 194 YERIQKRPAYEEANE 208 (226)
T ss_pred HHHHHhCccHHHHHH
Confidence 999999998877553
No 46
>cd03193 GST_C_Metaxin GST_C family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities. Other members are the cadmium-inducible
Probab=98.91 E-value=4.7e-09 Score=81.34 Aligned_cols=71 Identities=17% Similarity=0.194 Sum_probs=57.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHhhcCc----cccccCchHHHHHHHHh
Q 021153 22 PPAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTK----SFTSEFPHVERYFWTVA 92 (316)
Q Consensus 22 k~~~e~a~~~l~~~L~~LE~~L~~~tfLvGeriTlADI~la~~L~~~~~~~~d~----~~~~~yP~L~rW~~tv~ 92 (316)
......+..++.+.++.||++|++++|++|+++|+|||++++.+.++....++. ..+..+|+|.+|+++|.
T Consensus 14 ~~~~~~~~~~~~~~l~~le~~L~~~~yl~Gd~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~r~~ 88 (88)
T cd03193 14 WTLTREIYSLAKKDLKALSDLLGDKKFFFGDKPTSLDATVFGHLASILYAPLPNSALQLILKEYPNLVEYCERIR 88 (88)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCccCCCCCCHHHHHHHHHHHHHHhcCCCChHHHHHHHhCcHHHHHHHHhC
Confidence 344457788999999999999999999999999999999999998875432221 12467999999999873
No 47
>cd03205 GST_C_6 GST_C family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.89 E-value=6.6e-09 Score=82.22 Aligned_cols=70 Identities=26% Similarity=0.309 Sum_probs=60.0
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHhhcCccccccCchHHHHHHHH
Q 021153 19 QYIPPAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTV 91 (316)
Q Consensus 19 p~nk~~~e~a~~~l~~~L~~LE~~L~~~tfLvGeriTlADI~la~~L~~~~~~~~d~~~~~~yP~L~rW~~tv 91 (316)
..++...+.+...+.+.|..||++|.+++| +++|+|||++++.+.++.....+..++..||+|.+|+++|
T Consensus 29 ~~~~~~~~~~~~~~~~~l~~le~~L~~~~~---d~~TlADi~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~rm 98 (98)
T cd03205 29 KRSQPWLERQRGKIERALDALEAELAKLPL---DPLDLADIAVACALGYLDFRHPDLDWRAAHPALAAWYARF 98 (98)
T ss_pred hhChHHHHHHHHHHHHHHHHHHHhhhhCCC---CCCCHHHHHHHHHHHHHHhHccCcchhhhChHHHHHHHhC
Confidence 446788999999999999999999998888 9999999999999988865434444568999999999875
No 48
>cd03200 GST_C_JTV1 GST_C family, JTV-1 subfamily; composed of uncharacterized proteins with similarity to the translation product of the human JTV-1 gene. Human JTV-1, a gene of unknown function, initiates within the human PMS2 gene promoter, but is transcribed from the opposite strand. PMS2 encodes a protein involved in DNA mismatch repair and is mutated in a subset of patients with hereditary nonpolyposis colon cancer. It is unknown whether the expression of JTV-1 affects that of PMS2, or vice versa, as a result of their juxtaposition. JTV-1 is up-regulated while PMS2 is down-regulated in tumor cell spheroids that show increased resistance to anticancer cytotoxic drugs compared with tumor cell monolayers indicating that suppressed DNA mismatch repair may be a mechanism for multicellular resistance to alkylating agents.
Probab=98.87 E-value=6.3e-09 Score=82.93 Aligned_cols=59 Identities=31% Similarity=0.423 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHhhcCccccccCchHHHHHHHHhcC
Q 021153 30 AALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQ 94 (316)
Q Consensus 30 ~~l~~~L~~LE~~L~~~tfLvGeriTlADI~la~~L~~~~~~~~d~~~~~~yP~L~rW~~tv~a~ 94 (316)
.++.+.+..||++|.+++||+|+++|+|||++++.+.+. ..+ ...||+|.+|+++|.++
T Consensus 38 ~~~~~~l~~le~~L~~~~fl~Gd~~tiADi~l~~~l~~~---~~~---~~~~p~l~~w~~r~~~~ 96 (96)
T cd03200 38 KEKAAVLRALNSALGRSPWLVGSEFTVADIVSWCALLQT---GLA---SAAPANVQRWLKSCENL 96 (96)
T ss_pred HHHHHHHHHHHHHHcCCCccCCCCCCHHHHHHHHHHHHc---ccc---cccChHHHHHHHHHHhC
Confidence 466678999999999999999999999999999888642 222 46899999999999864
No 49
>TIGR00862 O-ClC intracellular chloride channel protein. These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.
Probab=98.86 E-value=9.8e-09 Score=94.93 Aligned_cols=82 Identities=23% Similarity=0.228 Sum_probs=67.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhc------------------CCCcccCCCCCHHHHHHHHHHHHHHHh---hcCccccccC
Q 021153 23 PAEEGAVAALKRALDALNIHLA------------------SNTYLVGHSVTLADIVMICNLYYGFKL---IMTKSFTSEF 81 (316)
Q Consensus 23 ~~~e~a~~~l~~~L~~LE~~L~------------------~~tfLvGeriTlADI~la~~L~~~~~~---~~d~~~~~~y 81 (316)
...+.....+.+.|+.||++|. ++.||+|+++|+|||++++.+.++... ..+.+..+.|
T Consensus 119 ~~~~~~~~~l~~~l~~Le~~L~~~~~~~~~~~~~~~~~~~~~~f~~Gd~~tlaD~~l~p~l~~l~~~~~~~~~~~i~~~~ 198 (236)
T TIGR00862 119 EANDNLEKGLLKALKKLDDYLNSPLPEEIDEDSAEDEKVSRRKFLDGDELTLADCNLLPKLHIVKVVAKKYRNFDIPAEF 198 (236)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccCCCcccCCccchhhHHHHHHHHHHHHHHHHHhCcCccccC
Confidence 3445566679999999999997 478999999999999999999887642 2233446899
Q ss_pred chHHHHHHHHhcChhHHHhhccc
Q 021153 82 PHVERYFWTVANQPKIKKFLGDF 104 (316)
Q Consensus 82 P~L~rW~~tv~a~P~~k~vl~~~ 104 (316)
|+|.+|+++|.++|+|+.+++.-
T Consensus 199 p~l~~w~~~~~~~~sf~~t~p~~ 221 (236)
T TIGR00862 199 TGVWRYLSNAYAREEFTNTCPDD 221 (236)
T ss_pred chHHHHHHHHhccchHHhhCCCh
Confidence 99999999999999999986543
No 50
>PF14497 GST_C_3: Glutathione S-transferase, C-terminal domain; PDB: 3AY8_A 2UZ8_B 1V2A_C 2HNL_A 2YV9_B 3H1N_A 3FR6_A 1Q4J_B 1PA3_B 1OKT_B ....
Probab=98.86 E-value=5.8e-09 Score=82.68 Aligned_cols=68 Identities=28% Similarity=0.402 Sum_probs=54.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCC--cccCCCCCHHHHHHHHHHHHHHHhhcCccccccCchHHHHHHHHhc
Q 021153 22 PPAEEGAVAALKRALDALNIHLASNT--YLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVAN 93 (316)
Q Consensus 22 k~~~e~a~~~l~~~L~~LE~~L~~~t--fLvGeriTlADI~la~~L~~~~~~~~d~~~~~~yP~L~rW~~tv~a 93 (316)
+...+...+++.+.|..||++|+.++ ||+|+++|+|||++++.|...... .+.+.||||.+|++||.+
T Consensus 30 ~~~~~~~~~~~~~~l~~l~~~L~~~~~~~l~G~~~T~AD~~v~~~l~~~~~~----~~~~~~p~L~~w~~ri~~ 99 (99)
T PF14497_consen 30 EASGDFSREELPKALKILEKHLAERGGDFLVGDKPTLADIAVFGFLASLRWA----DFPKDYPNLVRWYERIEE 99 (99)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHTSSSSSSSSS--HHHHHHHHHHHHHHCC----HHTTTCHHHHHHHHHHHT
T ss_pred hhhHHhhHHHHHHHHHHHHHHHHcCCCeeecCCCCCHHHHHHHHHHHHHhhc----ccccccHHHHHHHHhhcC
Confidence 35667888999999999999999988 999999999999999988554321 112689999999999974
No 51
>cd03202 GST_C_etherase_LigE GST_C family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=98.84 E-value=1.1e-08 Score=84.96 Aligned_cols=68 Identities=21% Similarity=0.284 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHhhcCccccccCchHHHHHHHHhc
Q 021153 25 EEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVAN 93 (316)
Q Consensus 25 ~e~a~~~l~~~L~~LE~~L~~~tfLvGeriTlADI~la~~L~~~~~~~~d~~~~~~yP~L~rW~~tv~a 93 (316)
.+.+.+.+.+.|+.||++|++++||+|+++|+||+++++.+.+.... .+......+|+|.+|+++|.+
T Consensus 56 ~~~~~~~~~~~l~~l~~~L~~~~fl~Gd~~t~AD~~l~~~l~~~~~~-~~~~~~~~~p~l~~W~~r~~~ 123 (124)
T cd03202 56 REAALANFRAALEPLRATLKGQPFLGGAAPNYADYIVFGGFQWARIV-SPFPLLEEDDPVYDWFERCLD 123 (124)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCccCCCCCchhHHHHHHHHHHHHHc-CcccccccCChHHHHHHHHhc
Confidence 45778889999999999999999999999999999999999887543 122335789999999999976
No 52
>PLN02817 glutathione dehydrogenase (ascorbate)
Probab=98.82 E-value=1.3e-08 Score=95.55 Aligned_cols=76 Identities=17% Similarity=0.183 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHHHHHhcC-CCcccCCCCCHHHHHHHHHHHHHHHh---hcCccccccCchHHHHHHHHhcChhHHHhhcc
Q 021153 28 AVAALKRALDALNIHLAS-NTYLVGHSVTLADIVMICNLYYGFKL---IMTKSFTSEFPHVERYFWTVANQPKIKKFLGD 103 (316)
Q Consensus 28 a~~~l~~~L~~LE~~L~~-~tfLvGeriTlADI~la~~L~~~~~~---~~d~~~~~~yP~L~rW~~tv~a~P~~k~vl~~ 103 (316)
..+.+.+.|..||++|.. +.||+|+++|+|||++++.+.++... ..+....+.||+|.+|+++|.++|+|+.+...
T Consensus 172 ~~~~l~~~l~~LE~~L~~~g~yl~Gd~~SlADi~l~p~L~~l~~~~~~~~~~~i~~~~P~L~~w~~ri~~rps~~~~~~~ 251 (265)
T PLN02817 172 TEQALLDELTSFDDYIKENGPFINGEKISAADLSLGPKLYHLEIALGHYKNWSVPDSLPFVKSYMKNIFSMESFVKTRAL 251 (265)
T ss_pred HHHHHHHHHHHHHHHHhcCCCeeCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHHhcchhHhhcCCC
Confidence 345677889999999974 68999999999999999998765321 11222357899999999999999999998764
No 53
>KOG4420 consensus Uncharacterized conserved protein (Ganglioside-induced differentiation associated protein 1, GDAP1) [Function unknown]
Probab=98.79 E-value=1.6e-08 Score=93.55 Aligned_cols=84 Identities=25% Similarity=0.306 Sum_probs=75.2
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhcC----CCcccCCCCCHHHHHHHHHHHHHHHhhcCccccc--cCchHHHHHHHHhcC
Q 021153 21 IPPAEEGAVAALKRALDALNIHLAS----NTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTS--EFPHVERYFWTVANQ 94 (316)
Q Consensus 21 nk~~~e~a~~~l~~~L~~LE~~L~~----~tfLvGeriTlADI~la~~L~~~~~~~~d~~~~~--~yP~L~rW~~tv~a~ 94 (316)
+.....+.+.++..+|..+|+.|.. .+||+|+.+|+|||+++.+|+++...++...+.. +.|||..++.++..|
T Consensus 199 d~s~lkkild~l~~~Ld~VEteLe~r~~~~~wL~G~efslADVsLg~~LhRL~~Lg~e~~yw~~gsrpnle~Yf~rvrrR 278 (325)
T KOG4420|consen 199 DVSYLKKILDELAMVLDQVETELEKRKLCELWLCGCEFSLADVSLGATLHRLKFLGLEKKYWEDGSRPNLESYFERVRRR 278 (325)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhhccccceeeccccchHHHHHHHHHHHHHHHcccHHHhcccCCCccHHHHHHHHHhh
Confidence 4456778888999999999999987 5899999999999999999999998887666554 899999999999999
Q ss_pred hhHHHhhccc
Q 021153 95 PKIKKFLGDF 104 (316)
Q Consensus 95 P~~k~vl~~~ 104 (316)
++|+++++..
T Consensus 279 ~sf~kvlg~~ 288 (325)
T KOG4420|consen 279 FSFRKVLGDI 288 (325)
T ss_pred hHHHHhhhhH
Confidence 9999999976
No 54
>PRK15113 glutathione S-transferase; Provisional
Probab=98.78 E-value=1.4e-08 Score=91.43 Aligned_cols=77 Identities=17% Similarity=0.092 Sum_probs=63.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcC-CCcccCCCCCHHHHHHHHHHHHHHHhhcCccccccCchHHHHHHHHhcChhHHHh
Q 021153 22 PPAEEGAVAALKRALDALNIHLAS-NTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKF 100 (316)
Q Consensus 22 k~~~e~a~~~l~~~L~~LE~~L~~-~tfLvGeriTlADI~la~~L~~~~~~~~d~~~~~~yP~L~rW~~tv~a~P~~k~v 100 (316)
....+..++.+.+.|..||++|.+ ..||+|+ +|+|||++++++.++.....+ . .|+|.+|+++|.++|+|+++
T Consensus 132 ~~~~~~~~~~~~~~l~~le~~L~~~~~~l~G~-~TlADi~l~~~l~~~~~~~~~---~--~p~l~~~~~r~~~rp~~~~~ 205 (214)
T PRK15113 132 APLSEAGKAAAEKLFAVAERLLAPGQPNLFGE-WCIADTDLALMLNRLVLHGDE---V--PERLADYATFQWQRASVQRW 205 (214)
T ss_pred CcccHHHHHHHHHHHHHHHHHHhcCCCEeeCC-ccHHHHHHHHHHHHHHHcCCC---C--CHHHHHHHHHHhcCHHHHHH
Confidence 445677888899999999999975 4699996 999999999999876543322 2 29999999999999999998
Q ss_pred hccc
Q 021153 101 LGDF 104 (316)
Q Consensus 101 l~~~ 104 (316)
+...
T Consensus 206 ~~~~ 209 (214)
T PRK15113 206 LALS 209 (214)
T ss_pred HHHh
Confidence 7654
No 55
>PRK10387 glutaredoxin 2; Provisional
Probab=98.68 E-value=2.7e-08 Score=88.48 Aligned_cols=68 Identities=16% Similarity=0.149 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHhhcCccccccCchHHHHHHHHhcChhHH
Q 021153 26 EGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIK 98 (316)
Q Consensus 26 e~a~~~l~~~L~~LE~~L~~~tfLvGeriTlADI~la~~L~~~~~~~~d~~~~~~yP~L~rW~~tv~a~P~~k 98 (316)
+.+.+.+.+.|+.||++|.+ +||+|+++|+|||++++.+.++.... + ...+|+|.+|++||.++|++.
T Consensus 141 ~~~~~~~~~~l~~le~~L~~-~~l~G~~~s~ADi~l~~~l~~~~~~~-~---~~~~p~l~~w~~r~~~r~~~~ 208 (210)
T PRK10387 141 PGLIKEINADLRALDPLIVK-PNAVNGELSTDDIHLFPILRNLTLVK-G---IEWPPRVADYRDNMSKKTQVP 208 (210)
T ss_pred HHHHHHHHHHHHHHHHHhcC-ccccCCCCCHHHHHHHHHHhcceeec-C---CCCCHHHHHHHHHHHHHhCCC
Confidence 35677899999999999986 99999999999999999998865421 2 234699999999999998763
No 56
>PLN02907 glutamate-tRNA ligase
Probab=98.59 E-value=9.3e-08 Score=100.96 Aligned_cols=66 Identities=24% Similarity=0.313 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHhhcCccccccCchHHHHHHHHhcChh
Q 021153 31 ALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPK 96 (316)
Q Consensus 31 ~l~~~L~~LE~~L~~~tfLvGeriTlADI~la~~L~~~~~~~~d~~~~~~yP~L~rW~~tv~a~P~ 96 (316)
.+.+.|+.||++|..++||+|+++|+|||++++.+...............||+|.||+++|.++|+
T Consensus 94 ~l~~~L~~LE~~L~~rtYLvGd~lTLADIaL~~~L~~~~~~~~~~~~~~~yPnL~RW~erI~arPs 159 (722)
T PLN02907 94 EFENACEYVDGYLASRTFLVGYSLTIADIAIWSGLAGSGQRWESLRKSKKYQNLVRWFNSISAEYS 159 (722)
T ss_pred HHHHHHHHHHHHhccCCeecCCCCCHHHHHHHHHHHhhhhhhhcccccccCHHHHHHHHHHHhCCC
Confidence 466789999999999999999999999999999886542211122236789999999999999999
No 57
>cd03212 GST_C_Metaxin1_3 GST_C family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins. Mammalian metaxin (or metaxin 1) is a component of the preprotein import complex of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals.
Probab=98.48 E-value=4.3e-07 Score=77.11 Aligned_cols=72 Identities=17% Similarity=0.219 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHhhcCc----cccccCchHHHHHHHHhcC
Q 021153 23 PAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTK----SFTSEFPHVERYFWTVANQ 94 (316)
Q Consensus 23 ~~~e~a~~~l~~~L~~LE~~L~~~tfLvGeriTlADI~la~~L~~~~~~~~d~----~~~~~yP~L~rW~~tv~a~ 94 (316)
...+.....+.+.++.|+++|.+++||+|+++|++|+++++.+..+....++. ....+||||.+|.+||.++
T Consensus 60 ~~~~~~~~~a~~~l~~l~~~L~~~~~~~Gd~~t~~D~~~~~~l~~~~~~~~~~~~l~~~~~~~pnL~~~~~ri~~~ 135 (137)
T cd03212 60 EVEAEIYRDAKECLNLLSQRLGESQFFFGDTPTSLDALVFGYLAPLLKAPLPNNKLQNHLKQCPNLCRFCDRILSL 135 (137)
T ss_pred hhHHHHHHHHHHHHHHHHHHHCCCCcCCCCCCcHHHHHHHHHHHHHHhccCCChHHHHHHHHCcHHHHHHHHHHHh
Confidence 45667778888999999999999999999999999999999887766433321 1357899999999999753
No 58
>cd03211 GST_C_Metaxin2 GST_C family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=98.36 E-value=8.2e-07 Score=74.22 Aligned_cols=68 Identities=12% Similarity=0.261 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHh-----hcCccccccCchHHHHHHHH
Q 021153 23 PAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKL-----IMTKSFTSEFPHVERYFWTV 91 (316)
Q Consensus 23 ~~~e~a~~~l~~~L~~LE~~L~~~tfLvGeriTlADI~la~~L~~~~~~-----~~d~~~~~~yP~L~rW~~tv 91 (316)
...+.....+.+.|+.|++.|.+++||+|+++|.||+++++.+..+... .+. .....||||.+|.+||
T Consensus 53 ~~~ee~~~~~~~~l~aLs~~Lg~~~~l~Gd~pT~~Da~vf~~la~~~~~~~~~~~l~-~~~~~~pnL~~y~~Ri 125 (126)
T cd03211 53 KTLDQVIEEVDQCCQALSQRLGTQPYFFGDQPTELDALVFGHLFTILTTQLPNDELA-EKVKKYSNLLAFCRRI 125 (126)
T ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCcHHHHHHHHHHHHHHhcCCCChHHH-HHHHhCcHHHHHHHhc
Confidence 3456777888899999999999999999999999999999998776543 221 2367899999999987
No 59
>KOG1695 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.36 E-value=1.4e-06 Score=79.11 Aligned_cols=79 Identities=27% Similarity=0.324 Sum_probs=67.7
Q ss_pred HHHHHHHHHHHHHHHHhc--CCCcccCCCCCHHHHHHHHHHHHHHHhhcCccccccCchHHHHHHHHhcChhHHHhhccc
Q 021153 27 GAVAALKRALDALNIHLA--SNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFLGDF 104 (316)
Q Consensus 27 ~a~~~l~~~L~~LE~~L~--~~tfLvGeriTlADI~la~~L~~~~~~~~d~~~~~~yP~L~rW~~tv~a~P~~k~vl~~~ 104 (316)
.......+.+..+++.|. ++.||||+++|+||++++..+..+... +++.....+|+|.++.++|.++|.+++.+...
T Consensus 123 ~~~Pa~~~~~~~~~~~L~~~~sgflvGd~lT~aDl~i~e~l~~l~~~-~~~~~~~~~P~L~a~~~kv~~~p~ik~~i~~r 201 (206)
T KOG1695|consen 123 LYLPAKPKYFKILEKILKKNKSGFLVGDKLTWADLVIAEHLDTLEEL-LDPSALDHFPKLKAFKERVSSIPNIKKYLESR 201 (206)
T ss_pred hhccchHHHHHHHHHHHHhCCCCeeecCcccHHHHHHHHHHHHHHHh-cCchhhccChHHHHHHHHHhcCchHHHHHhcC
Confidence 455577788999999998 357999999999999999999887654 56666888999999999999999999999876
Q ss_pred cc
Q 021153 105 KQ 106 (316)
Q Consensus 105 ~~ 106 (316)
+.
T Consensus 202 ~~ 203 (206)
T KOG1695|consen 202 PV 203 (206)
T ss_pred CC
Confidence 54
No 60
>TIGR02182 GRXB Glutaredoxin, GrxB family. This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.
Probab=98.32 E-value=7.3e-07 Score=80.28 Aligned_cols=66 Identities=17% Similarity=0.279 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHhhcCccccccCc-hHHHHHHHHhcChhH
Q 021153 26 EGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFP-HVERYFWTVANQPKI 97 (316)
Q Consensus 26 e~a~~~l~~~L~~LE~~L~~~tfLvGeriTlADI~la~~L~~~~~~~~d~~~~~~yP-~L~rW~~tv~a~P~~ 97 (316)
+.....+.+.|+.||++|.+++||.| ++|+|||++++.+.++.... + ..+| +|.+|++||.+++++
T Consensus 140 ~~~~~~~~~~l~~le~~L~~~~~l~g-~~TiADi~l~~~l~~~~~~~-~----~~~p~~l~~w~~Ri~ar~~~ 206 (209)
T TIGR02182 140 PGLLEEINADLEELDKLIDGPNAVNG-ELSEDDILVFPLLRNLTLVA-G----INWPSRVADYLDNMSKKSKV 206 (209)
T ss_pred HHHHHHHHHHHHHHHHHHhCccccCC-CCCHHHHHHHHHhcCeeeec-C----CCCChHHHHHHHHHHHHhCC
Confidence 35667899999999999999999955 69999999999997754321 1 1357 999999999998865
No 61
>KOG0406 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.25 E-value=4.7e-06 Score=76.69 Aligned_cols=83 Identities=18% Similarity=0.270 Sum_probs=69.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhc-CCCcccCCCCCHHHHHHHHHHHHHHHhhc-----CccccccCchHHHHHHHHhcCh
Q 021153 22 PPAEEGAVAALKRALDALNIHLA-SNTYLVGHSVTLADIVMICNLYYGFKLIM-----TKSFTSEFPHVERYFWTVANQP 95 (316)
Q Consensus 22 k~~~e~a~~~l~~~L~~LE~~L~-~~tfLvGeriTlADI~la~~L~~~~~~~~-----d~~~~~~yP~L~rW~~tv~a~P 95 (316)
.+..+.+.+++...|..||+.|. +.+|+.|+.+++.||++++.+.+...... +...-..+|.|.+|.++|.++|
T Consensus 124 ~e~~~~~~~e~~e~l~~lE~el~k~k~~fgG~~~G~vDi~~~p~~~~~~~~~~~~~~~~~~~~~~~P~L~~W~~~~~~~~ 203 (231)
T KOG0406|consen 124 GEEQEAAKEELREALKVLEEELGKGKDFFGGETIGFVDIAIGPSFERWLAVLEKFGGVKFIIEEETPKLIKWIKRMKEDE 203 (231)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcCHhhhhHHhhHHHHHHHHHHhcCcccCCCCCCccHHHHHHHHhcCh
Confidence 47778889999999999999999 78999999999999999988777654321 1112578999999999999999
Q ss_pred hHHHhhccc
Q 021153 96 KIKKFLGDF 104 (316)
Q Consensus 96 ~~k~vl~~~ 104 (316)
+++.++.+.
T Consensus 204 ~V~~~~p~~ 212 (231)
T KOG0406|consen 204 AVKAVLPDS 212 (231)
T ss_pred hHHhhcCCH
Confidence 999998765
No 62
>KOG0868 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.25 E-value=1.6e-06 Score=76.50 Aligned_cols=77 Identities=23% Similarity=0.344 Sum_probs=67.2
Q ss_pred HHHHHHHHHHHHHHHHHHhcC--CCcccCCCCCHHHHHHHHHHHHHHHhhcCccccccCchHHHHHHHHhcChhHHHhhc
Q 021153 25 EEGAVAALKRALDALNIHLAS--NTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFLG 102 (316)
Q Consensus 25 ~e~a~~~l~~~L~~LE~~L~~--~tfLvGeriTlADI~la~~L~~~~~~~~d~~~~~~yP~L~rW~~tv~a~P~~k~vl~ 102 (316)
..-+..-+.+.+..||+.|.. +.|.|||.+|+|||++.+.+..+.....| +..||.|.|-.+++.+.|+|+.+.+
T Consensus 130 ~~W~q~~ItkGF~ALEklL~~~aGkycvGDevtiADl~L~pqv~nA~rf~vd---l~PYPti~ri~e~l~elpaFq~ahP 206 (217)
T KOG0868|consen 130 DQWAQHFITKGFTALEKLLKSHAGKYCVGDEVTIADLCLPPQVYNANRFHVD---LTPYPTITRINEELAELPAFQAAHP 206 (217)
T ss_pred hHHHHHHHHHhHHHHHHHHHHccCCcccCceeehhhhccchhhhhhhhcccc---CCcCchHHHHHHHHHhCHHHHhcCC
Confidence 344666788999999999976 57999999999999999999988766667 8999999999999999999998776
Q ss_pred cc
Q 021153 103 DF 104 (316)
Q Consensus 103 ~~ 104 (316)
+.
T Consensus 207 ~n 208 (217)
T KOG0868|consen 207 DN 208 (217)
T ss_pred CC
Confidence 54
No 63
>cd03197 GST_C_mPGES2 GST_C family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH, or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature, and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated and a C-terminal soluble domain with a GST-like structure. The C-terminus contains two structural domains a N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST active site is located in a cleft between t
Probab=98.24 E-value=3.1e-06 Score=73.08 Aligned_cols=63 Identities=16% Similarity=0.103 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHHHh-cCCCcccCCCCCHHHHHHHHHHHHHHHh-hc-CccccccCchHHHHHHHHhc
Q 021153 28 AVAALKRALDALNIHL-ASNTYLVGHSVTLADIVMICNLYYGFKL-IM-TKSFTSEFPHVERYFWTVAN 93 (316)
Q Consensus 28 a~~~l~~~L~~LE~~L-~~~tfLvGeriTlADI~la~~L~~~~~~-~~-d~~~~~~yP~L~rW~~tv~a 93 (316)
.++.+...++..=+.+ .+++|++|+++|||||++++.+..+... .+ + +.+||+|.+|+++|.+
T Consensus 80 ~r~~L~~a~~~w~~~~~~~~~FlaGd~ptIADisvyg~l~s~e~~~~~~D---l~~~p~I~~W~eRm~~ 145 (149)
T cd03197 80 VREWLYDALNTWVAALGKDRQFHGGSKPNLADLAVYGVLRSVEGHPAFKD---MVEETKIGEWYERMDA 145 (149)
T ss_pred HHHHHHHHHHHHHHHhcCCCCccCCCCCCHHHHHHHHHHHHHHHhccccc---hhhCcCHHHHHHHHHH
Confidence 3455555554433445 4568999999999999999999776544 33 3 6789999999999975
No 64
>COG0435 ECM4 Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.20 E-value=1.3e-06 Score=81.80 Aligned_cols=96 Identities=25% Similarity=0.377 Sum_probs=76.6
Q ss_pred hhHHHHHHhh--cCC----CCChHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHh---hc--C
Q 021153 6 NISRWVYPRL--GYM----QYIPPAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKL---IM--T 74 (316)
Q Consensus 6 ~~~~w~~p~~--G~~----p~nk~~~e~a~~~l~~~L~~LE~~L~~~tfLvGeriTlADI~la~~L~~~~~~---~~--d 74 (316)
.+..|+++-+ |.. .-++++.+++...+-..|+.||+.|+++.||+|+++|-|||-+++.|.+.... .+ +
T Consensus 178 ~~n~~Iy~~vNNGVYk~GFA~tq~aYeea~~~lF~~Ld~lE~~L~~~ryl~Gd~lTEAD~RLftTlvRFD~VYvgHFKCN 257 (324)
T COG0435 178 ELNKWIYDTVNNGVYKAGFATTQEAYEEAVKKLFEALDKLEQILSERRYLTGDQLTEADIRLFTTLVRFDPVYVGHFKCN 257 (324)
T ss_pred HHHhhhcccccCceeeecccchHHHHHHHHHHHHHHHHHHHHHhhcCeeeccccchHhhhhhhheeEeecceEEeeeecc
Confidence 4566777654 322 34689999999999999999999999999999999999999999999874321 11 1
Q ss_pred ccccccCchHHHHHHHHhcChhHHHhh
Q 021153 75 KSFTSEFPHVERYFWTVANQPKIKKFL 101 (316)
Q Consensus 75 ~~~~~~yP~L~rW~~tv~a~P~~k~vl 101 (316)
-.-...||||..|+..+.+.|.|....
T Consensus 258 ~~rI~dypnL~~yLr~LYq~pg~~~T~ 284 (324)
T COG0435 258 LRRIRDYPNLWGYLRDLYQLPGFAETV 284 (324)
T ss_pred cchhhcCchHHHHHHHHhcCccccccc
Confidence 112345999999999999999998765
No 65
>KOG2903 consensus Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.92 E-value=3.7e-06 Score=78.13 Aligned_cols=95 Identities=24% Similarity=0.345 Sum_probs=75.2
Q ss_pred hHHHHHHhh--cCC----CCChHHHHHHHHHHHHHHHHHHHHhcCCC--cccCCCCCHHHHHHHHHHHHHHH---hhc--
Q 021153 7 ISRWVYPRL--GYM----QYIPPAEEGAVAALKRALDALNIHLASNT--YLVGHSVTLADIVMICNLYYGFK---LIM-- 73 (316)
Q Consensus 7 ~~~w~~p~~--G~~----p~nk~~~e~a~~~l~~~L~~LE~~L~~~t--fLvGeriTlADI~la~~L~~~~~---~~~-- 73 (316)
...|+++-+ |.. +.++++.+.+..++-+.|+.+|+.|+++. |++|+++|.|||-+++.+.+... ..+
T Consensus 177 ~N~wvy~~INNGVYk~GFA~~~e~Ye~~V~~lfe~LDr~E~vL~~~~~~f~~G~~LTeaDirLy~TiIRFD~VY~~hFKC 256 (319)
T KOG2903|consen 177 TNSWVYDKINNGVYKCGFAEKQEAYEEEVNQLFEALDRCEDVLGKNRKYFLCGDTLTEADIRLYTTIIRFDEVYVQHFKC 256 (319)
T ss_pred hhceecccccCceeeeccccccchHHHHHHHHHHHHHHHHHHHhcccceEeeccccchhheeeeeeEEeehhhhheeeec
Confidence 456777654 322 44788999999999999999999999876 99999999999999998877432 222
Q ss_pred C-ccccccCchHHHHHHHHhc-ChhHHHhh
Q 021153 74 T-KSFTSEFPHVERYFWTVAN-QPKIKKFL 101 (316)
Q Consensus 74 d-~~~~~~yP~L~rW~~tv~a-~P~~k~vl 101 (316)
. ...|..||+|..|...+.. .|+|+.+.
T Consensus 257 n~~~ir~~Yp~l~~~lk~iY~~~~~~~~Tt 286 (319)
T KOG2903|consen 257 NKKTIRDEYPNLHNWLKNIYWNIPGFSSTT 286 (319)
T ss_pred chhhhhccCcHHHHHHHHHHhhccchhhcc
Confidence 2 2347799999999999987 89888754
No 66
>KOG1422 consensus Intracellular Cl- channel CLIC, contains GST domain [Inorganic ion transport and metabolism]
Probab=97.61 E-value=0.00011 Score=66.59 Aligned_cols=78 Identities=22% Similarity=0.209 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHHHHHhcC---CCcccCCCCCHHHHHHHHHHHHHHH---hhcCccccccCchHHHHHHHHhcChhHHH
Q 021153 26 EGAVAALKRALDALNIHLAS---NTYLVGHSVTLADIVMICNLYYGFK---LIMTKSFTSEFPHVERYFWTVANQPKIKK 99 (316)
Q Consensus 26 e~a~~~l~~~L~~LE~~L~~---~tfLvGeriTlADI~la~~L~~~~~---~~~d~~~~~~yP~L~rW~~tv~a~P~~k~ 99 (316)
+.....+...|..||++|.. +.||.||++|+||+.+++-|+.+.- ..-+...-+.+++|.||+..+.++..|..
T Consensus 122 ~~~e~~Ll~~L~~Ld~yL~sp~~~~Fl~Gd~lt~aDcsLlPKL~~i~va~k~yk~~~IP~~lt~V~rYl~~~ya~d~F~~ 201 (221)
T KOG1422|consen 122 DGLEKALLKELEKLDDYLKSPSRRKFLDGDKLTLADCSLLPKLHHIKVAAKHYKNFEIPASLTGVWRYLKNAYARDEFTN 201 (221)
T ss_pred chHHHHHHHHHHHHHHHhcCccCCccccCCeeeeehhhhchhHHHHHHHHHHhcCCCCchhhhHHHHHHHHHHhHHHhhc
Confidence 44455677888999999985 6899999999999999999977532 22344557889999999999999988876
Q ss_pred hhcc
Q 021153 100 FLGD 103 (316)
Q Consensus 100 vl~~ 103 (316)
.-..
T Consensus 202 tcp~ 205 (221)
T KOG1422|consen 202 TCPA 205 (221)
T ss_pred CCch
Confidence 5443
No 67
>PF14834 GST_C_4: Glutathione S-transferase, C-terminal domain; PDB: 3BBY_A.
Probab=97.07 E-value=0.0032 Score=52.12 Aligned_cols=74 Identities=20% Similarity=0.196 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcC-CCcccCCCCCHHHHHHHHHHHHHHHhhcCccccccCchHHHHHHHHhcChhHHHhh
Q 021153 23 PAEEGAVAALKRALDALNIHLAS-NTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFL 101 (316)
Q Consensus 23 ~~~e~a~~~l~~~L~~LE~~L~~-~tfLvGeriTlADI~la~~L~~~~~~~~d~~~~~~yP~L~rW~~tv~a~P~~k~vl 101 (316)
...+.+...+.+++...+..|.. ++||.|+ .||||..++.++.++..++.. --+.+..|.+++-++|++++.+
T Consensus 39 pLs~~a~~~a~kL~~~a~~ll~~g~~~LFGe-wsIAD~dlA~ml~Rl~~~gd~-----vP~~l~~Ya~~qwqrpsVQ~Wl 112 (117)
T PF14834_consen 39 PLSEAAQAAAQKLIAVAERLLADGGPNLFGE-WSIADADLALMLNRLVTYGDP-----VPERLADYAERQWQRPSVQRWL 112 (117)
T ss_dssp ---HHHHHHHHHHHHHHHHHTTT--SSTTSS---HHHHHHHHHHHHHHTTT---------HHHHHHHHHHHT-HHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCCCcccc-chHHHHHHHHHHHHHHHcCCC-----CCHHHHHHHHHHHCCHHHHHHH
Confidence 34567788888889999988865 6899996 999999999999998776532 2368899999999999999876
Q ss_pred c
Q 021153 102 G 102 (316)
Q Consensus 102 ~ 102 (316)
.
T Consensus 113 a 113 (117)
T PF14834_consen 113 A 113 (117)
T ss_dssp H
T ss_pred H
Confidence 4
No 68
>KOG1147 consensus Glutamyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=96.26 E-value=0.0027 Score=64.64 Aligned_cols=76 Identities=22% Similarity=0.283 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHhhcCccccccCchHHHHHHHHhcChhHHHhhccc
Q 021153 29 VAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFLGDF 104 (316)
Q Consensus 29 ~~~l~~~L~~LE~~L~~~tfLvGeriTlADI~la~~L~~~~~~~~d~~~~~~yP~L~rW~~tv~a~P~~k~vl~~~ 104 (316)
...+...+..|+.+|.-+|||||.++|+||++++..+..--...---...+.+-+|.||++-...+++.+.++...
T Consensus 90 ~~~~s~~~~~ld~~l~~~t~lvg~sls~Ad~aiw~~l~~n~~~~~~lk~~k~~~~v~Rw~~~~~~~~a~~~v~~t~ 165 (712)
T KOG1147|consen 90 FDEISSSLSELDKFLVLRTFLVGNSLSIADFAIWGALHSNGMRQEQLKAKKDYQNVERWYDLPEFQEAHNKVLATL 165 (712)
T ss_pred hHHHHHHHHHHHhhhhHHHHhhccchhHHHHHHHHHHhcccchHHHHHhhCCchhhhhhcCcHhHHHHHHHHHHHH
Confidence 4567888999999999999999999999999999998752111000001346789999999655666666555443
No 69
>KOG4244 consensus Failed axon connections (fax) protein/glutathione S-transferase-like protein [Signal transduction mechanisms]
Probab=95.96 E-value=0.0075 Score=56.55 Aligned_cols=67 Identities=21% Similarity=0.332 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHhhcCcc----ccccCchHHHHHHHHhcC
Q 021153 27 GAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKS----FTSEFPHVERYFWTVANQ 94 (316)
Q Consensus 27 ~a~~~l~~~L~~LE~~L~~~tfLvGeriTlADI~la~~L~~~~~~~~d~~----~~~~yP~L~rW~~tv~a~ 94 (316)
+..+-+++-|+.+++.|.++.||.|+++|-+|..+++.|..++- .+... .-..+|+|..+.+||.+.
T Consensus 203 Ei~ell~rDlr~i~~~Lg~KkflfGdkit~~DatvFgqLa~v~Y-P~~~~i~d~le~d~p~l~eYceRIr~~ 273 (281)
T KOG4244|consen 203 EIDELLHRDLRAISDYLGDKKFLFGDKITPADATVFGQLAQVYY-PFRSHISDLLEGDFPNLLEYCERIRKE 273 (281)
T ss_pred HHHHHHHHHHHHHHHHhCCCccccCCCCCcceeeehhhhhheec-cCCCcHHHHHhhhchHHHHHHHHHHHH
Confidence 35666788899999999999999999999999999998877643 32221 236799999999999853
No 70
>KOG3027 consensus Mitochondrial outer membrane protein Metaxin 2, Metaxin 1-binding protein [Cell wall/membrane/envelope biogenesis; Intracellular trafficking, secretion, and vesicular transport]
Probab=95.90 E-value=0.022 Score=51.80 Aligned_cols=77 Identities=14% Similarity=0.289 Sum_probs=63.8
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHhhcC----ccccccCchHHHHHHHHhc
Q 021153 18 MQYIPPAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMT----KSFTSEFPHVERYFWTVAN 93 (316)
Q Consensus 18 ~p~nk~~~e~a~~~l~~~L~~LE~~L~~~tfLvGeriTlADI~la~~L~~~~~~~~d----~~~~~~yP~L~rW~~tv~a 93 (316)
...+....+...+++.++.+.|..+|+.++|+.|++.|-+|..++..+..+...-+. ...+++|+||..+-.||.+
T Consensus 168 ~~W~~~~~DqVie~vdkc~~aLsa~L~~q~yf~g~~P~elDAlvFGHlytilTt~Lpn~ela~~lkkys~LlefcrrIeq 247 (257)
T KOG3027|consen 168 YDWDDKTMDQVIEQVDKCCRALSAQLGSQPYFTGDQPTELDALVFGHLYTILTTRLPNMELANILKKYSNLLEFCRRIEQ 247 (257)
T ss_pred cCcccccHHHHHHHHHHHHHHHHHHhcCCCccCCCCccHHHHHHHhhhHHhhhhcCCcHHHHHHHHHhHHHHHHHHHHHH
Confidence 345677788899999999999999999999999999999999999988777655432 1246889999999888865
Q ss_pred C
Q 021153 94 Q 94 (316)
Q Consensus 94 ~ 94 (316)
+
T Consensus 248 ~ 248 (257)
T KOG3027|consen 248 Q 248 (257)
T ss_pred H
Confidence 4
No 71
>PF04399 Glutaredoxin2_C: Glutaredoxin 2, C terminal domain; InterPro: IPR007494 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. Unlike other glutaredoxins, glutaredoxin 2 (Grx2) cannot reduce ribonucleotide reductase. Grx2 has significantly higher catalytic activity in the reduction of mixed disulphides with glutathione (GSH) compared with other glutaredoxins. The active site residues (Cys9-Pro10-Tyr11-Cys12, in Escherichia coli Grx2, P39811 from SWISSPROT), which are found at the interface between the N- and C-terminal domains are identical to other glutaredoxins, but there is no other similarity between glutaredoxin 2 and other glutaredoxins. Grx2 is structurally similar to glutathione-S-transferases (GST), but there is no obvious sequence similarity. The inter-domain contacts are mainly hydrophobic, suggesting that the two domains are unlikely to be stable on their own. Both domains are needed for correct folding and activity of Grx2. It is thought that the primary function of Grx2 is to catalyse reversible glutathionylation of proteins with GSH in cellular redox regulation including the response to oxidative stress. The N-terminal domain is IPR004045 from INTERPRO.; PDB: 1G7O_A 3IR4_A.
Probab=94.77 E-value=0.097 Score=44.46 Aligned_cols=68 Identities=21% Similarity=0.295 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHhhcCccccccCchHHHHHHHHhcChhH
Q 021153 25 EEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKI 97 (316)
Q Consensus 25 ~e~a~~~l~~~L~~LE~~L~~~tfLvGeriTlADI~la~~L~~~~~~~~d~~~~~~yP~L~rW~~tv~a~P~~ 97 (316)
......+++..|..||..|......-| ++|+-||.+++.|.. ...+-+ ..=-|+|.+|+++|+++-.+
T Consensus 57 t~~~i~~l~~~L~~Le~ll~~~~~~n~-~LS~dDi~lFp~LR~-Ltivkg---i~~P~~V~~Y~~~~s~~t~V 124 (132)
T PF04399_consen 57 TPELIAELNADLEELEPLLASPNAVNG-ELSIDDIILFPILRS-LTIVKG---IQWPPKVRAYMDRMSKATGV 124 (132)
T ss_dssp HHHHHHHHHHHHHHHHHH-SCTTBTTS-S--HHHHHHHHHHHH-HCTCTT---S---HHHHHHHHHHHHHHT-
T ss_pred CHHHHHHHHHHHHHHHHHhccccccCC-CCCHHHHHHHHHHhh-hhhccC---CcCCHHHHHHHHHHHHHcCC
Confidence 345666777778888877775555444 999999999999954 444434 22237999999999876443
No 72
>cd03199 GST_C_GRX2 GST_C family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD (most GRXs range from 9-12kD). GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain, but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=93.21 E-value=0.32 Score=41.09 Aligned_cols=65 Identities=23% Similarity=0.266 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHhhcCccccccCchHHHHHHHHhcChh
Q 021153 27 GAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPK 96 (316)
Q Consensus 27 ~a~~~l~~~L~~LE~~L~~~tfLvGeriTlADI~la~~L~~~~~~~~d~~~~~~yP~L~rW~~tv~a~P~ 96 (316)
....++...|..|+..|..... +++.+|+-||.++++|.. +..+-+ ..=-|+|.+|+++|+++-.
T Consensus 60 ~~i~~l~~~L~~l~~ll~~~~~-~n~~ls~DDi~lFp~LR~-Lt~vkg---i~~P~~V~~Y~~~~s~~t~ 124 (128)
T cd03199 60 QYIAALNALLEELDPLILSSEA-VNGQLSTDDIILFPILRN-LTLVKG---LVFPPKVKAYLERMSALTK 124 (128)
T ss_pred HHHHHHHHHHHHHHHHHcCccc-cCCcCCHHHHHHHHHHhh-hhhhcC---CCCCHHHHHHHHHHHHHhC
Confidence 3445666666677766644333 466899999999999955 444434 2223699999999987643
No 73
>KOG3028 consensus Translocase of outer mitochondrial membrane complex, subunit TOM37/Metaxin 1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=92.97 E-value=0.56 Score=45.11 Aligned_cols=71 Identities=15% Similarity=0.247 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHhhcCcc----ccccCchHHHHHHHHhcC
Q 021153 24 AEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKS----FTSEFPHVERYFWTVANQ 94 (316)
Q Consensus 24 ~~e~a~~~l~~~L~~LE~~L~~~tfLvGeriTlADI~la~~L~~~~~~~~d~~----~~~~yP~L~rW~~tv~a~ 94 (316)
.-+.......++++.|.++|+..+|+.||+.|--|..++..+..++...+..+ .+..++||.|+.+++...
T Consensus 160 ~e~~i~~~Aska~~~LS~~Lgs~kffFgd~psslDa~lfs~la~~~~~~Lp~~~Lq~~l~~~~NL~~~~~~i~s~ 234 (313)
T KOG3028|consen 160 REDQIYKDASKALNLLSTLLGSKKFFFGDKPSSLDALLFSYLAILLQVALPNDSLQVHLLAHKNLVRYVERIRSL 234 (313)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCceEeeCCCCchHHHHHHHHHHHHHhccCCchhHHHHHHhcchHHHHHHHHHHH
Confidence 34455567778999999999999999999999999999999988666544321 133499999999998754
No 74
>KOG3029 consensus Glutathione S-transferase-related protein [General function prediction only]
Probab=91.20 E-value=0.46 Score=45.30 Aligned_cols=66 Identities=17% Similarity=0.146 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHHHh-cCCCcccCCCCCHHHHHHHHHHHHHHHhhcCccccccCchHHHHHHHHhcC
Q 021153 28 AVAALKRALDALNIHL-ASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQ 94 (316)
Q Consensus 28 a~~~l~~~L~~LE~~L-~~~tfLvGeriTlADI~la~~L~~~~~~~~d~~~~~~yP~L~rW~~tv~a~ 94 (316)
-++.+..+++.--..| .+++||.|...+|||++++.+|..........+ .-...+|..|+-+|.+.
T Consensus 289 ~Re~lydA~d~Wvaalgknr~flGG~kPnLaDLsvfGvl~sm~gc~afkd-~~q~t~I~eW~~rmeal 355 (370)
T KOG3029|consen 289 EREHLYDAADQWVAALGKNRPFLGGKKPNLADLSVFGVLRSMEGCQAFKD-CLQNTSIGEWYYRMEAL 355 (370)
T ss_pred HHHHHHHHHHHHHHHhCCCCCccCCCCCchhhhhhhhhhhHhhhhhHHHH-HHhcchHHHHHHHHHHH
Confidence 4555555555555566 457999999999999999999977654321111 34568899999998753
No 75
>KOG1668 consensus Elongation factor 1 beta/delta chain [Transcription]
Probab=89.65 E-value=0.34 Score=44.75 Aligned_cols=60 Identities=20% Similarity=0.355 Sum_probs=48.2
Q ss_pred HHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHhhcCccccccCchHHHHHHHHhcChhHHH
Q 021153 33 KRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKK 99 (316)
Q Consensus 33 ~~~L~~LE~~L~~~tfLvGeriTlADI~la~~L~~~~~~~~d~~~~~~yP~L~rW~~tv~a~P~~k~ 99 (316)
.+.+..|+.+|.+.+|.-|..++-+|+.++..+.- ......+++..||+.++.++-....
T Consensus 10 ~~glk~l~~sLA~ks~~~g~~~s~edv~vf~al~~-------ep~s~~~v~~~~w~~~l~a~~~~~~ 69 (231)
T KOG1668|consen 10 PAGLKKLNKSLAEKSYIEGYQLSKEDVVVFAALGV-------EPQSARLVNAERWYSKLEALLRLLA 69 (231)
T ss_pred hhhhhhhhHhhhcccCCCCCCcccccceeehhccc-------CcchhhhhHHHHHHHHHHHHHHHHh
Confidence 57789999999999999999999999988777632 1124578999999999987755543
No 76
>PF11801 Tom37_C: Tom37 C-terminal domain; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=73.28 E-value=7.7 Score=34.08 Aligned_cols=38 Identities=21% Similarity=0.199 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHhcCC---CcccCCC-CCHHHHHHHHHHHHHH
Q 021153 32 LKRALDALNIHLASN---TYLVGHS-VTLADIVMICNLYYGF 69 (316)
Q Consensus 32 l~~~L~~LE~~L~~~---tfLvGer-iTlADI~la~~L~~~~ 69 (316)
..+++..|++.|+.. .|+.|+. +|-+||.+++.|.-+.
T Consensus 113 a~~~l~~L~~~L~~~~~~~~~f~~~~psslD~L~~ayL~l~l 154 (168)
T PF11801_consen 113 AMECLSLLEELLGEWEEARYFFGDSKPSSLDCLAFAYLALLL 154 (168)
T ss_pred HHHHHHHHHHHHhhccccccccCCCCCCHHHHHHHHHHHHHh
Confidence 557889999999988 9999988 9999999998886543
No 77
>PF09868 DUF2095: Uncharacterized protein conserved in archaea (DUF2095); InterPro: IPR018662 This domain, found in various hypothetical prokaryotic proteins, has no known function.
Probab=55.61 E-value=6 Score=32.96 Aligned_cols=28 Identities=21% Similarity=0.478 Sum_probs=24.3
Q ss_pred CCCCCCCCCCCCCCchhhhhhhhccCCC
Q 021153 155 KPKNPLDLLPPSKMILDDWKRLYSNTKS 182 (316)
Q Consensus 155 K~k~pl~~lp~~~f~ld~~Kr~ysN~~~ 182 (316)
|+|.|.|.+|=-..++++||+.|-+--.
T Consensus 2 ~kk~p~d~~~wqeyd~eEFkkkfP~Lak 29 (128)
T PF09868_consen 2 KKKKPIDEFPWQEYDIEEFKKKFPALAK 29 (128)
T ss_pred CCcCcccccchhHhhHHHHHHHhHHHHH
Confidence 5688999999999999999999977543
No 78
>KOG0867 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=53.17 E-value=1.9 Score=39.34 Aligned_cols=78 Identities=19% Similarity=0.107 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHhhcCccccccCchHHHHHHH-HhcChhHHHhhcccc
Q 021153 27 GAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWT-VANQPKIKKFLGDFK 105 (316)
Q Consensus 27 ~a~~~l~~~L~~LE~~L~~~tfLvGeriTlADI~la~~L~~~~~~~~d~~~~~~yP~L~rW~~t-v~a~P~~k~vl~~~~ 105 (316)
..+..+.+.|...+.+|...++ .+.+++|+.+...+...........++..++++.+|+.+ ....+ .+.+++++.
T Consensus 91 ~~ra~v~~~l~~~~~~l~~~~~---~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~~yl~g-~~~tlADl~ 166 (226)
T KOG0867|consen 91 KERAIVDQWLEFENGVLDPVTF---ERPILAPLLVGLPLNPTAVKELEAKLRKALDNLERFLKTQVYLAG-DQLTLADLS 166 (226)
T ss_pred HHHHHHHHHHHhhhcccccccc---cceeeecceecccCcchhhHHHHHHHHHHHHHHHHHHccCCcccC-CcccHHHHH
Confidence 6677788888888888876665 788999976666544444333445567889999999999 66667 888888888
Q ss_pred ccc
Q 021153 106 QAE 108 (316)
Q Consensus 106 ~~~ 108 (316)
++.
T Consensus 167 ~~~ 169 (226)
T KOG0867|consen 167 LAS 169 (226)
T ss_pred Hhh
Confidence 887
No 79
>COG2999 GrxB Glutaredoxin 2 [Posttranslational modification, protein turnover, chaperones]
Probab=41.47 E-value=61 Score=29.27 Aligned_cols=67 Identities=15% Similarity=0.189 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHhhcCccccccCchHHHHHHHHhcChhHH
Q 021153 27 GAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIK 98 (316)
Q Consensus 27 ~a~~~l~~~L~~LE~~L~~~tfLvGeriTlADI~la~~L~~~~~~~~d~~~~~~yP~L~rW~~tv~a~P~~k 98 (316)
....++...|+.|+..+...+ -+...++.-||.++++|..+. .+-+-.|- -.|..|..+|+++-.+.
T Consensus 142 ~~~~~i~~dl~~l~~Li~~~s-~~n~~l~~ddi~vFplLRnlt-~v~gi~wp---s~v~dy~~~msektqV~ 208 (215)
T COG2999 142 QYLKRIQADLRALDKLIVGPS-AVNGELSEDDILVFPLLRNLT-LVAGIQWP---SRVADYRDNMSEKTQVN 208 (215)
T ss_pred HHHHHHHHHHHHHHHHhcCcc-hhccccchhhhhhhHHhccce-ecccCCCc---HHHHHHHHHHHHhhCcc
Confidence 345566777777887776655 345679999999999996543 33332221 36889999998765543
No 80
>PF13200 DUF4015: Putative glycosyl hydrolase domain
Probab=24.29 E-value=55 Score=31.83 Aligned_cols=69 Identities=17% Similarity=0.266 Sum_probs=42.7
Q ss_pred CceEEEEee-ecCCCcce---eEE-------eccchhhHHHhhh-hhhh-hcceeEEEEeeCCCc-ceEEEEEEeCCCCC
Q 021153 200 GYSLWFCDY-KYNDENTV---SFV-------TLNKVSGFLQRMD-LARK-YAFGKMLIIGNEPPY-KVKGLWLFRGPEIP 265 (316)
Q Consensus 200 ~~S~w~~~y-ky~~el~~---~fm-------s~Nli~Gf~qRl~-~~rK-~~Fg~~~v~G~~~~~-~I~G~~~~rG~~~~ 265 (316)
|+-==..|| +||++... .|- -.+-|.+|+++.. .+++ ..+-|+.|||-.--+ +-.| =||++
T Consensus 137 GFdEIqfDYIRFP~~~~~~~l~y~~~~~~~~r~~aI~~Fl~~a~~~l~~~~v~vSaDVfG~~~~~~~~~~----iGQ~~- 211 (316)
T PF13200_consen 137 GFDEIQFDYIRFPDEGRLSGLDYSENDTEESRVDAITDFLAYAREELHPYGVPVSADVFGYVAWSPDDMG----IGQDF- 211 (316)
T ss_pred CCCEEEeeeeecCCCCcccccccCCCCCcchHHHHHHHHHHHHHHHHhHcCCCEEEEecccccccCCCCC----cCCCH-
Confidence 555566788 88884322 221 3467999999988 4554 579999999965322 2122 38888
Q ss_pred ccccccccc
Q 021153 266 KFVMDECYD 274 (316)
Q Consensus 266 ~~~~~~~~d 274 (316)
. .+..+.|
T Consensus 212 ~-~~a~~vD 219 (316)
T PF13200_consen 212 E-KIAEYVD 219 (316)
T ss_pred H-HHhhhCC
Confidence 3 4444444
No 81
>PF11280 DUF3081: Protein of unknown function (DUF3081); InterPro: IPR021432 This family of proteins with unknown function appears to be restricted to Gammaproteobacteria.
Probab=23.72 E-value=1.2e+02 Score=23.60 Aligned_cols=35 Identities=23% Similarity=0.455 Sum_probs=25.5
Q ss_pred cCCCCceEEEEeeecCCCcceeEEecc----------chhhHHHhhhhh
Q 021153 196 YDPEGYSLWFCDYKYNDENTVSFVTLN----------KVSGFLQRMDLA 234 (316)
Q Consensus 196 ~d~e~~S~w~~~yky~~el~~~fms~N----------li~Gf~qRl~~~ 234 (316)
.|.+||.+|... ...|+++|.=| ...-|++||.++
T Consensus 34 ~D~DGYtv~L~~----~~VtLtl~FHnty~~dy~~~~~~~~F~kkl~~i 78 (79)
T PF11280_consen 34 SDFDGYTVYLED----NGVTLTLGFHNTYHLDYDQEHNYDSFLKKLKAI 78 (79)
T ss_pred ecCCCcEEEEeC----CCEEEEEEeccceecCCCCHHHHHHHHHHHHcc
Confidence 588999999842 56788888766 366777777653
No 82
>PF12569 NARP1: NMDA receptor-regulated protein 1 ; InterPro: IPR021183 This group represents N-terminal acetyltransferase A (NatA) auxiliary subunit and represents a non-catalytic component of the NatA N-terminal acetyltransferase, which catalyzes acetylation of proteins beginning with Met-Ser, Met-Gly and Met-Ala. N-terminal acetylation plays a role in normal eukaryotic translation and processing, protect against proteolytic degradation and protein turnover. NAT1 anchors ARD1 and NAT5 to the ribosome and may present the N- terminal of nascent polypeptides for acetylation [], [].
Probab=22.58 E-value=37 Score=35.19 Aligned_cols=76 Identities=9% Similarity=0.043 Sum_probs=41.1
Q ss_pred HHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHhhcCccccccCchHHHH
Q 021153 8 SRWVYPRLGYMQYIPPAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERY 87 (316)
Q Consensus 8 ~~w~~p~~G~~p~nk~~~e~a~~~l~~~L~~LE~~L~~~tfLvGeriTlADI~la~~L~~~~~~~~d~~~~~~yP~L~rW 87 (316)
|.|+.--.|..-........|+.....++.++++...++ =|+..+|+=.. ....|-.+.||
T Consensus 304 c~Wf~~e~a~a~~r~~~~~~ALk~~~~v~k~f~~~~~DQ----------fDFH~Yc~RK~---------t~r~Y~~~L~~ 364 (517)
T PF12569_consen 304 CMWFETECAEAYLRQGDYGLALKRFHAVLKHFDDFEEDQ----------FDFHSYCLRKM---------TLRAYVDMLRW 364 (517)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccc----------ccHHHHHHhhc---------cHHHHHHHHHH
Confidence 456554444332333444556666666666666544332 14443332111 13356677888
Q ss_pred HHHHhcChhHHHhhc
Q 021153 88 FWTVANQPKIKKFLG 102 (316)
Q Consensus 88 ~~tv~a~P~~k~vl~ 102 (316)
-+++..+|.+.++..
T Consensus 365 ed~l~~~~~y~raa~ 379 (517)
T PF12569_consen 365 EDKLRSHPFYRRAAK 379 (517)
T ss_pred HHHhhcCHHHHHHHH
Confidence 888888887766543
Done!