BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021156
(316 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O82782|HIS4_ARATH 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase, chloroplastic
OS=Arabidopsis thaliana GN=HIS6 PE=2 SV=1
Length = 304
Score = 478 bits (1231), Expect = e-134, Method: Compositional matrix adjust.
Identities = 231/302 (76%), Positives = 261/302 (86%)
Query: 12 RTRSLQPTSVSDLFWLHKNNNSSFYAPSSSLSRPSRLSVRCAVRFRPCIDIHKGKVKQIV 71
RT S Q S L W K N SS + +S+PSR+ + AV+FRPCIDIHKGKVKQIV
Sbjct: 2 RTLSSQLYSNGGLTWFQKKNQSSLFIKHLRVSKPSRVQLISAVQFRPCIDIHKGKVKQIV 61
Query: 72 GSTLQDSKDDGTKLVTNFESDKSAAEFANLYKEDGLTGGHAIMLGADPLSKAAAIEALHA 131
GSTL+D K+DG+ LVTNFESDKSA E+A +YKEDGLTGGH IMLGADPLS+AAAI ALHA
Sbjct: 62 GSTLRDLKEDGSVLVTNFESDKSAEEYAKMYKEDGLTGGHVIMLGADPLSQAAAIGALHA 121
Query: 132 YPGGLQVGGGINSDNSLSYIEEGATHVIVTSYVFNNGQMDLERLKDLVRVVGKQRLVLDL 191
YPGGLQVGGGINS+N +SYIEEGA+HVIVTSYVFNNG++DLERLKD+V +VGKQRL+LDL
Sbjct: 122 YPGGLQVGGGINSENCMSYIEEGASHVIVTSYVFNNGKIDLERLKDIVSIVGKQRLILDL 181
Query: 192 SCRKKDGKYAIVTDRWQKFSDVYLDERVLDFLASYADEFLVHGVDVEGKKLGIDDELVAL 251
SCRKKDG+YAIVTDRWQKFSDV LDE+ L+FL ++DEFLVHGVDVEGKKLGID+ELVAL
Sbjct: 182 SCRKKDGRYAIVTDRWQKFSDVILDEKSLEFLGGFSDEFLVHGVDVEGKKLGIDEELVAL 241
Query: 252 LGKYSPIPVTYAGGVTTMADLEKIKVAGIGRVDVTVGSALDIFGGNLAYKDVVAWHAQQE 311
LG YSPIPVTYAGGVT M D+E+IK AG GRVDVTVGSALDIFGGNL YKDVVAWH +Q
Sbjct: 242 LGNYSPIPVTYAGGVTVMDDVERIKDAGKGRVDVTVGSALDIFGGNLPYKDVVAWHHKQH 301
Query: 312 AL 313
+L
Sbjct: 302 SL 303
>sp|Q10184|HIS4_SCHPO 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC3F10.09 PE=3 SV=1
Length = 264
Score = 252 bits (644), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 127/261 (48%), Positives = 177/261 (67%), Gaps = 6/261 (2%)
Query: 56 FRPCIDIHKGKVKQIVGSTLQDSKDDGTKLVTNFESDKSAAEFANLYKEDGLTGGHAIML 115
FRPCIDIH+G+VKQIVG TL + D + TN+ S K ++ +A LYK + L G H IML
Sbjct: 9 FRPCIDIHQGQVKQIVGGTLGNDAD----VKTNYVSLKPSSYYAELYKLNHLEGAHVIML 64
Query: 116 GADPLSKAAAIEALHAYPGGLQVGGGINSDNSLSYIEEGATHVIVTSYVFNNGQMDLERL 175
G P + AA ALH +PG LQ+GGGIN N+ ++++EGA+ VIVTS++F + Q DL+RL
Sbjct: 65 G--PNCEEAAKTALHTWPGALQIGGGINISNAQNWLQEGASKVIVTSWLFPDAQFDLDRL 122
Query: 176 KDLVRVVGKQRLVLDLSCRKKDGKYAIVTDRWQKFSDVYLDERVLDFLASYADEFLVHGV 235
K + +GK RLV+D+SCR+KD ++ ++WQ + L+E LD L+ Y EFL+H
Sbjct: 123 KAISSKIGKDRLVVDVSCRRKDNRWFAAINKWQVMTAFELNEENLDLLSQYCSEFLIHAA 182
Query: 236 DVEGKKLGIDDELVALLGKYSPIPVTYAGGVTTMADLEKIKVAGIGRVDVTVGSALDIFG 295
DVEG GID++LV LG++ IP TYAGG ++ DL+ + G+VD+T+GSALDIFG
Sbjct: 183 DVEGLCKGIDEDLVIKLGEWVKIPTTYAGGGRSIEDLDLVDKLSKGKVDLTIGSALDIFG 242
Query: 296 GNLAYKDVVAWHAQQEALTVQ 316
G L + VVAW+ + L +Q
Sbjct: 243 GVLEFTRVVAWNRRFTPLPLQ 263
>sp|Q6C2U0|HIS4_YARLI 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Yarrowia lipolytica
(strain CLIB 122 / E 150) GN=HIS6 PE=3 SV=1
Length = 264
Score = 236 bits (603), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 125/265 (47%), Positives = 175/265 (66%), Gaps = 14/265 (5%)
Query: 54 VRFRPCIDIHKGKVKQIVGSTLQDSKDDGTKLVTNFESDKSAAEFANLYKEDGLTGGHAI 113
+FR CIDIH G+VKQIVG TL DS D L TNF + + FA LYK++ + G H I
Sbjct: 2 TKFRGCIDIHSGQVKQIVGGTLTDSDAD---LKTNFVATQPPGYFAQLYKDNNVVGTHVI 58
Query: 114 MLGADPLSKAAAIEALHAYPGGLQVGGGINSDNSLSYIEEGATHVIVTSYVFNNGQMDLE 173
LG P AA EAL +P LQ+GGGIN DN+ +I+ GA+HVIVTS++F + ++D++
Sbjct: 59 KLG--PGCDEAAEEALAGWPDHLQIGGGINHDNAEKWIKLGASHVIVTSFLFPDAKLDMK 116
Query: 174 RLKDLVRVV----GKQRLVLDLSCRKKDGKYAIVTDRWQKFSDVYLDERVLDFLASYADE 229
RL DL ++ GK+R+V+DLSCR+KDGK+ + +RWQ +D +++ L+ LA + DE
Sbjct: 117 RLTDLEAILEPYGGKKRIVVDLSCRRKDGKWVVAMNRWQTLTDTEVNKETLEQLAKHCDE 176
Query: 230 FLVHGVDVEGKKLGIDDELVALLGKYSP----IPVTYAGGVTTMADLEKIKVAGIGRVDV 285
FL+H DVEG GID+ELV LG++ PVTYAGG + DL ++ G+VD+
Sbjct: 177 FLIHAADVEGLCNGIDEELVTKLGEWLEEGHLPPVTYAGGAKNIDDLALVQKLSHGKVDL 236
Query: 286 TVGSALDIFGGN-LAYKDVVAWHAQ 309
T GSALD+FGG+ + + D V W+ +
Sbjct: 237 TYGSALDVFGGDKVKFSDCVEWNEK 261
>sp|Q7RXQ8|HIS4_NEUCR 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=his-6 PE=3 SV=1
Length = 257
Score = 231 bits (589), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 119/261 (45%), Positives = 170/261 (65%), Gaps = 9/261 (3%)
Query: 54 VRFRPCIDIHKGKVKQIVGSTLQDSKDDGTKLVTNFESDKSAAEFANLYKEDGLTGGHAI 113
RFRPCID+H G+VKQIVG TL + ++L TNF S A FA LY+++ L+G H I
Sbjct: 2 TRFRPCIDLHAGQVKQIVGGTLDSAT---SELRTNFVSPHPPAYFAKLYRDNDLSGAHVI 58
Query: 114 MLGADPLSKAAAIEALHAYPGGLQVGGGINSDNSLSYIEEGATHVIVTSYVFNNGQMDLE 173
MLG P +K AA+E+L A+PGGLQVGGGI N+ ++E GA VI+TSY+F NG+
Sbjct: 59 MLG--PGNKEAALESLKAWPGGLQVGGGITDANAREWVEAGAEKVIITSYLFPNGKFSQS 116
Query: 174 RLKDLVRVVG--KQRLVLDLSCRKK-DGKYAIVTDRWQKFSDVYLDERVLDFLASYADEF 230
L ++ + K +LV+DLSCR++ D ++ + ++WQ +D+ + E + L Y EF
Sbjct: 117 HLDAVLAALDGDKSKLVIDLSCRRQGDDRWFVAMNKWQTITDMEVSEESIKALEPYCSEF 176
Query: 231 LVHGVDVEGKKLGIDDELVALLGKYSPIPVTYAGGVTTMADLEKIKVAGIGRVDVTVGSA 290
L+H D EG + GID++LV L ++ IPVTYAGG + DLE +K G+VD+T+GSA
Sbjct: 177 LIHAADNEGLQKGIDEKLVQRLSEWCSIPVTYAGGGRNLEDLETVKRLSGGKVDLTIGSA 236
Query: 291 LDIFGGN-LAYKDVVAWHAQQ 310
LD FGG + ++ V W+ +Q
Sbjct: 237 LDCFGGKGVTLQECVEWNRRQ 257
>sp|Q75AP1|HIS4_ASHGO 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Ashbya gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
Y-1056) GN=HIS6 PE=3 SV=1
Length = 263
Score = 220 bits (560), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 126/265 (47%), Positives = 171/265 (64%), Gaps = 13/265 (4%)
Query: 55 RFRPCIDIHKGKVKQIVGSTLQDSKDDGTKLVTNFESDKSAAEFANLYKEDGLTGGHAIM 114
RF CID+H GKVKQIVG TL SK DG VTNF SDKS + +A+LY + + G H I
Sbjct: 3 RFVGCIDLHDGKVKQIVGGTL-SSKPDGEAPVTNFVSDKSPSHYAHLYASNDVQGSHVIR 61
Query: 115 LGADPLSKAAAIEALHAYPGGLQVGGGINSDNSLSYIEEGATHVIVTSYVFN-NGQMDLE 173
LG + AA+ AL A PG LQ+GGG+ DN Y + A+ VIVTS +F+ +G L+
Sbjct: 62 LGQS--NDEAALMALQAAPGFLQLGGGVTKDNC-QYWLQWASKVIVTSALFDSDGSFQLQ 118
Query: 174 RLKDLVRVVGKQRLVLDLSCRK-KDG-KYAIVTDRWQKFSDVYLDERVLDFLASYADEFL 231
RL+++ + G+ RLV+DLSCR+ DG + ++ ++WQ + + L+E L L+ Y EFL
Sbjct: 119 RLREISGLCGRARLVVDLSCRRASDGASWTVMMNKWQTPTTLALNEETLALLSEYCSEFL 178
Query: 232 VHGVDVEGKKLGIDDELVALLGKYSP-----IPVTYAGGVTTMADLEKIKVAGIGRVDVT 286
+H DVEG GID+ELVA LG ++ + V YAGG ++ADL +K GRVD+T
Sbjct: 179 IHAADVEGLCRGIDEELVAQLGLWAAQLRGDVRVVYAGGANSVADLGLVKRLSGGRVDLT 238
Query: 287 VGSALDIFGGNLA-YKDVVAWHAQQ 310
GSALDIFGG+L ++D AW+ QQ
Sbjct: 239 YGSALDIFGGSLVRFQDCCAWNRQQ 263
>sp|Q9HFV5|HIS4_CANAX 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Candida albicans
GN=HIS6 PE=3 SV=1
Length = 279
Score = 209 bits (531), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 110/271 (40%), Positives = 172/271 (63%), Gaps = 17/271 (6%)
Query: 54 VRFRPCIDIHKGKVKQIVGSTLQDSKDDGTKLVT---NFESDKSAAEFANLYKEDGLTGG 110
+FR CIDIH G+VKQIVG TL +K + NF S K ++ +A LYK+ + G
Sbjct: 2 TKFRGCIDIHSGQVKQIVGGTLTQDDSASSKTSSAKENFVSTKPSSHYAQLYKDYNVKGC 61
Query: 111 HAIMLGADPLSKAAAIEALHAYPGGLQVGGGINSDNSLSYIEEGATHVIVTSYVFNNG-- 168
H I LG++P + AA AL +P LQVGGGIN DN+ ++++GA+HVI+TS++F
Sbjct: 62 HVIKLGSNPANDDAAKLALSTWPHNLQVGGGINLDNAQYWLDQGASHVILTSWLFTKNEQ 121
Query: 169 ---QMDLERLKDLVRVVGKQRLVLDLSCRK--KDGK--YAIVTDRWQKFSDVYLDERVLD 221
++D +L+++ +++GK++L++DLSCR ++GK + + ++WQ +D L L
Sbjct: 122 DKMELDFGKLREISKLIGKEKLIVDLSCRTVIENGKTNWYVAMNKWQTITDTILSAEFLL 181
Query: 222 FLASYADEFLVHGVDVEGKKLGIDDELVALLGKYSPI----PVTYAGGVTTMADLEKIKV 277
+++Y DEFL+H DVEG GID++LV LG++ P+ + YAGG ++ DL+ +
Sbjct: 182 KVSAYCDEFLIHAADVEGLCKGIDEKLVENLGEWCPVGFEEKIVYAGGAKSINDLDTVAK 241
Query: 278 AGIGRVDVTVGSALDIFGGNLA-YKDVVAWH 307
G+VD+T GS+LDIF G L + D+V W+
Sbjct: 242 LSKGKVDLTYGSSLDIFSGKLVNFTDLVEWN 272
>sp|Q6CQL7|HIS4_KLULA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Kluyveromyces
lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC
1267 / NRRL Y-1140 / WM37) GN=HIS6 PE=3 SV=1
Length = 267
Score = 208 bits (529), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 118/270 (43%), Positives = 167/270 (61%), Gaps = 17/270 (6%)
Query: 55 RFRPCIDIHKGKVKQIVGSTLQDSKDDGTKLVTNFESDKSAAEFANLYKEDGLTGGHAIM 114
+F CID+H G+VKQIVG TL DS D K+ TNF S + +A LY E+ + G H I
Sbjct: 3 KFVGCIDLHDGQVKQIVGGTLTDSSKD--KVTTNFVSKLPPSHYAKLYHENQVEGCHVIK 60
Query: 115 LGADPLSKAAAIEALHAYPGGLQVGGGINSDNSLSYIEEGATHVIVTSYVFNNG--QMDL 172
LG P + AA+EAL+ P LQVGGGI DN Y + A+ +IVTS++F+ Q
Sbjct: 61 LG--PNNDEAALEALNECPNFLQVGGGITLDNC-GYWLKYASKIIVTSFLFDKSTYQFQR 117
Query: 173 ERLKDLVRVVGKQRLVLDLSCRK-----KDGKYAIVTDRWQKFSDVYLDERVLDFLASYA 227
E+L L + GK RLV+DLSC++ ++ K+ + ++WQ +D+ L+ER L Y
Sbjct: 118 EKLVKLAEICGKDRLVVDLSCKRVTKPDQEPKWVVAMNKWQTLTDLELNERTFADLCQYT 177
Query: 228 DEFLVHGVDVEGKKLGIDDELVALLGKYS----PIPVTYAGGVTTMADLEKIKVAGIGRV 283
DEFLVH DVEG GID+ELVA L K++ + + YAGG ++ DL ++ G++
Sbjct: 178 DEFLVHAADVEGLCNGIDEELVAHLYKWTADIPKVKIVYAGGAKSVDDLRLVEKLSHGKI 237
Query: 284 DVTVGSALDIFGGNLA-YKDVVAWHAQQEA 312
D+T GSALDIFGG+L ++D V W+ ++ A
Sbjct: 238 DLTFGSALDIFGGSLVKFEDCVQWNHEKHA 267
>sp|Q6BUV9|HIS4_DEBHA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Debaryomyces
hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC
0083 / IGC 2968) GN=HIS6 PE=3 SV=2
Length = 276
Score = 205 bits (522), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 116/274 (42%), Positives = 170/274 (62%), Gaps = 22/274 (8%)
Query: 54 VRFRPCIDIHKGKVKQIVGSTLQDSKDDGTKL------VTNFESDKSAAEFANLYKEDGL 107
+FR CIDIH G+VKQIVG TL ++DD T+L NF S K ++ +A LYK G+
Sbjct: 2 TKFRGCIDIHSGQVKQIVGGTL--TQDDTTELNHKSTTTENFVSTKPSSYYAELYKNAGI 59
Query: 108 TGGHAIMLGADPLSKAAAIEALHAYPGGLQVGGGINSDNSLSYIE-EGATHVIVTSYVFN 166
G H I LG++P + AA A ++P LQVGGGIN DN+L +++ A+HVI+TS++F+
Sbjct: 60 NGCHVIKLGSNPENDEAAKLACQSWPNNLQVGGGINGDNALEWLDVHKASHVILTSWLFS 119
Query: 167 NG----QMDLERLKDLVRVVGKQRLVLDLSCR--KKDGK--YAIVTDRWQKFSDVYLDER 218
+ + D +LK + +VGK RL++DLSCR + D K + + ++WQ ++ L
Sbjct: 120 DSDEGKEFDWVKLKRVSELVGKSRLIVDLSCRELRVDDKIEWVVAMNKWQTLTNNKLSAE 179
Query: 219 VLDFLASYADEFLVHGVDVEGKKLGIDDELVALLGKYSPI----PVTYAGGVTTMADLEK 274
L ++ Y DEFL+H DVEG GID LVA LG++ P + YAGG ++ DL+
Sbjct: 180 FLGEVSQYCDEFLIHAADVEGLCNGIDVNLVAKLGEWCPEGFEGKIVYAGGARSVKDLDT 239
Query: 275 IKVAGIGRVDVTVGSALDIFGGNLA-YKDVVAWH 307
+ +VD+T GSALD+FGG L + D+V+W+
Sbjct: 240 VSKLSDDKVDLTYGSALDVFGGKLVKFDDLVSWN 273
>sp|P40545|HIS4_YEAST 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=HIS6 PE=1
SV=1
Length = 261
Score = 201 bits (510), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 115/264 (43%), Positives = 163/264 (61%), Gaps = 12/264 (4%)
Query: 54 VRFRPCIDIHKGKVKQIVGSTLQDSKDDGTKLVTNFESDKSAAEFANLYKEDGLTGGHAI 113
+F CID+H G+VKQIVG TL K+D K TNF S ++ +A LYK+ + G H I
Sbjct: 2 TKFIGCIDLHNGEVKQIVGGTLTSKKEDVPK--TNFVSQHPSSYYAKLYKDRDVQGCHVI 59
Query: 114 MLGADPLSKAAAIEALHAYPGGLQVGGGINSDNSLSYIEEGATHVIVTSYVFN-NGQMDL 172
LG P + AA EAL P LQVGGGIN N L ++ + A+ VIVTS++F G L
Sbjct: 60 KLG--PNNDDAAREALQESPQFLQVGGGINDTNCLEWL-KWASKVIVTSWLFTKEGHFQL 116
Query: 173 ERLKDLVRVVGKQRLVLDLSCRK-KDGKYAIVTDRWQKFSDVYLDERVLDFLASYADEFL 231
+RL+ L + GK R+V+DLSCRK +DG++ + ++WQ +D+ L+ L Y +EFL
Sbjct: 117 KRLERLTELCGKDRIVVDLSCRKTQDGRWIVAMNKWQTLTDLELNADTFRELRKYTNEFL 176
Query: 232 VHGVDVEGKKLGIDDELVALLGK----YSPIPVTYAGGVTTMADLEKIKVAGIGRVDVTV 287
+H DVEG GID+ LV+ L + Y + + YAGG ++ DL+ + G+VD+T
Sbjct: 177 IHAADVEGLCGGIDELLVSKLFEWTKDYDDLKIVYAGGAKSVDDLKLVDELSHGKVDLTF 236
Query: 288 GSALDIFGGNLA-YKDVVAWHAQQ 310
GS+LDIFGGNL ++D W+ +Q
Sbjct: 237 GSSLDIFGGNLVKFEDCCRWNEKQ 260
>sp|Q6FPN5|HIS4_CANGA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Candida glabrata
(strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
NRRL Y-65) GN=HIS6 PE=3 SV=1
Length = 261
Score = 187 bits (474), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 112/265 (42%), Positives = 166/265 (62%), Gaps = 14/265 (5%)
Query: 54 VRFRPCIDIHKGKVKQIVGSTLQDSKDDGTKLVTNFESDKSAAEFANLYKEDGLTGGHAI 113
+F CID+H G+VKQIVG TL+D+ D L TNF S + +A LY E+ + G H I
Sbjct: 2 TKFVGCIDLHDGQVKQIVGGTLKDNDD---SLETNFVSKYPPSYYAQLYLENRIEGCHVI 58
Query: 114 MLGADPLSKAAAIEALHAYPGGLQVGGGINSDNSLSYIEEGATHVIVTSYVFN-NGQMDL 172
LG P + AAA+EAL+A PG LQVGGGIN +N L ++E+ A+ +IVTS++F G +
Sbjct: 59 KLG--PNNDAAAMEALNAAPGFLQVGGGINDENCLQWLEK-ASKIIVTSWLFTKEGTFLM 115
Query: 173 ERLKDLVRVVGKQRLVLDLSCRKK-DGKYAIVTDRWQKFSDVYLDERVLDFLASYADEFL 231
+RL+ L G R+V+DLSCR+ D K+ + ++WQ + + L++ L+ Y DEFL
Sbjct: 116 DRLQLLSNKCGPDRIVVDLSCRRTPDSKWVVAMNKWQTLTTLELNKETFTELSKYTDEFL 175
Query: 232 VHGVDVEGKKLGIDDELVALLGKYS-----PIPVTYAGGVTTMADLEKIKVAGIGRVDVT 286
+H DVEG GI+ +LV L +++ + + YAGG +++DLE + G VD+T
Sbjct: 176 IHAADVEGLCKGIETDLVTKLYEWTKDINKEVKIVYAGGAKSISDLELVDKLSNGTVDLT 235
Query: 287 VGSALDIFGGNLA-YKDVVAWHAQQ 310
GS+LDIFGG L ++D W+++
Sbjct: 236 YGSSLDIFGGKLVRFQDCCEWNSKH 260
>sp|Q8TYD6|HIS4_METKA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Methanopyrus
kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC
100938) GN=hisA PE=3 SV=1
Length = 242
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 88/158 (55%), Gaps = 11/158 (6%)
Query: 136 LQVGGGINS-DNSLSYIEEGATHVIVTSYVFNNGQMDLERLKDLVRVVGKQRLV-LDLSC 193
+QVGGGI S + + IE GA +IV + F + + D ++ D+ G + V LD++
Sbjct: 77 VQVGGGIRSAERAEELIELGADRLIVGTVAFTD-KDDFSKIVDVCHDHGIEVFVALDVN- 134
Query: 194 RKKDGKYAIVTDRWQKFSDVYLDERVLDFLASYADEFLVHGVDVEGKKLGIDDELVALLG 253
+ ++ W++ + V L++ + F AD +L V VEGK++GID+++V
Sbjct: 135 ----ENHEVLVSGWKEDAGVTLEDAIERF-NEVADGYLTTAVHVEGKEMGIDEKVVEKST 189
Query: 254 KYSPIPVTYAGGVTTMADLEKIKVAGIGRVDVTVGSAL 291
+ +PV YAGG+ ++ D+++ K A G V +G+AL
Sbjct: 190 GATDLPVLYAGGIASIKDVKRAKEA--GAYGVVIGTAL 225
>sp|Q2NHB3|HIS4_METST 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Methanosphaera
stadtmanae (strain DSM 3091) GN=hisA PE=3 SV=1
Length = 237
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 118/254 (46%), Gaps = 26/254 (10%)
Query: 58 PCIDIHKGKVKQIVGSTLQDSKDDGTKLVTNFESDKSAAEFANLYKEDGLTGGHAIML-G 116
P +DI GK Q+V + GT+ V ++ AE A +++ G H + L G
Sbjct: 5 PAVDIKNGKCVQLV------QGEPGTEQVV----IENPAEVAKQWEQKGAKKLHIVDLDG 54
Query: 117 ADPLSKAAAI--EALHAYPGGLQVGGGINS-DNSLSYIEEGATHVIVTSYVFNNGQMDLE 173
A + +I E + +Q+GGGI S ++ +E G VI+ + N ++
Sbjct: 55 ALGSGRNLSIVKEIIEKTKSPIQLGGGIRSVSDAKKLLEIGVNTVIIGTMAIKNPEI--- 111
Query: 174 RLKDLVRVVGKQRLVLDLSCRKKDGKYAIVTDRWQKFSDVYLDERVLDFLASYADEFLVH 233
+K+L G +R+ + L + +VT W++ +D E F A L
Sbjct: 112 -IKELSSEYGCERICVSLDSKNN----KVVTHGWKESTDKTPIEYAKLFEKMGAGSILFT 166
Query: 234 GVDVEGKKLGIDDELVALLGKYSPIPVTYAGGVTTMADLEKIKVAGIGRVDVTVGSALDI 293
VDVEG GI+ E + L IP+ Y+GG+T++ DL+ + + IG V +GSAL
Sbjct: 167 NVDVEGLLNGINLEPIKELLNNVSIPIIYSGGITSVDDLKVL--SDIGVDYVVIGSAL-- 222
Query: 294 FGGNLAYKDVVAWH 307
+ G + +D + +
Sbjct: 223 YKGLITLEDALKYQ 236
>sp|Q7MLS2|HIS4_VIBVY 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Vibrio vulnificus
(strain YJ016) GN=hisA PE=3 SV=1
Length = 245
Score = 61.2 bits (147), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 118/259 (45%), Gaps = 24/259 (9%)
Query: 58 PCIDIHKGKVKQIVGSTLQDSKDDGTKLVTNFESDKSAAEFANLYKEDGLTGGHAIMLGA 117
P +D+ +G+V ++ D G VT ++ D AE NLY + G H + L
Sbjct: 4 PALDLIEGQVVRLY------QGDYGQ--VTEYKVDP--AEQFNLYHQAGANWLHLVDLTG 53
Query: 118 DPLSKAAAIEA----LHAYPGGLQVGGGINSDNS-LSYIEEGATHVIVTSYVFNNGQMDL 172
+ A ++ L + P +Q+GGG+ ++ + +E GA V+V S ++
Sbjct: 54 AKDTTARQLDLIAKLLASTPANIQIGGGVRTEQDVIDLLEAGAQRVVVGSTAVKQPEL-- 111
Query: 173 ERLKDLVRVVGKQRLVLDLSCR-KKDGKYAIVTDRWQKFSDVYLDERVLDFLASYADEFL 231
+K + G +++VL L +DG + WQ+ S V ++ + D+L L
Sbjct: 112 --VKGWMEKYGAEKIVLALDINIDQDGTRKVAISGWQEDSGVTIEALINDYLTVGLQHVL 169
Query: 232 VHGVDVEGKKLGIDDEL-VALLGKYSPIPVTYAGGVTTMADLEKIKVAGIGRVDVTVGSA 290
+ +G G + EL V L +Y + +GG+ ++AD+E +K G G V VG A
Sbjct: 170 CTDISRDGTLEGSNVELYVDLCKQYPQVQFQSSGGIGSLADIEALK--GSGVAGVIVGRA 227
Query: 291 LDIFGGNLAYKDVVAWHAQ 309
L + G A + W ++
Sbjct: 228 L-LDGKFTAEEAFACWQSE 245
>sp|A7MX07|HIS4_VIBHB 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Vibrio harveyi
(strain ATCC BAA-1116 / BB120) GN=hisA PE=3 SV=1
Length = 245
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 111/241 (46%), Gaps = 23/241 (9%)
Query: 58 PCIDIHKGKVKQIVGSTLQDSKDDGTKLVTNFESDKSAAEFANLYKEDGLTGGHAIMLGA 117
P +D+ +G+V ++ D G VT ++ D AE NLY + G H + L
Sbjct: 4 PALDLIEGQVVRLY------QGDYGQ--VTEYKVDP--AEQFNLYHQAGANWLHLVDLTG 53
Query: 118 DPLSKAAAIEA----LHAYPGGLQVGGGINSDNS-LSYIEEGATHVIVTSYVFNNGQMDL 172
+ A ++ L + P +Q+GGG+ ++ + +E GA V+V S ++
Sbjct: 54 AKDTTARQLDLIAKLLASTPANIQIGGGVRTEQDVIDLLEAGAQRVVVGSTAVKQPEL-- 111
Query: 173 ERLKDLVRVVGKQRLVLDLSCR-KKDGKYAIVTDRWQKFSDVYLDERVLDFLASYADEFL 231
+K + G +++VL L +DG + WQ+ S V ++ + D+L L
Sbjct: 112 --VKGWMEKYGAEKIVLALDINIYQDGTRKVAISGWQEDSGVTIEALINDYLTVGLQHVL 169
Query: 232 VHGVDVEGKKLGIDDEL-VALLGKYSPIPVTYAGGVTTMADLEKIKVAGIGRVDVTVGSA 290
+ +G G + EL V L +Y + +GG+ ++AD+E +K G G V VG A
Sbjct: 170 CTDISRDGTLEGSNVELYVDLCKQYPQVQFQSSGGIGSLADIEALK--GSGVAGVIVGRA 227
Query: 291 L 291
L
Sbjct: 228 L 228
>sp|Q58927|HIS4_METJA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=hisA PE=3 SV=1
Length = 237
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 89/160 (55%), Gaps = 18/160 (11%)
Query: 136 LQVGGGI-NSDNSLSYIEEGATHVIVTSYVFNNGQMDLERLKDLVRVVGKQRLVLDLSCR 194
++VGGGI N + + I G VIV + ++ + + DL + +GK ++VL + C
Sbjct: 76 VEVGGGIRNLEIAKELISLGVDRVIVGTKAI----LEPKFIDDLNKEIGKDKIVLAVEC- 130
Query: 195 KKDGKYAIVTDRWQKFSDVYLDERVLDFLASYADE---FLVHGVDVEGKKLGIDDELVAL 251
K+GK +V W++ +D+ ++ + + D+ L VDVEG GI+ +++
Sbjct: 131 -KEGK--VVIKGWKE----KVDKTPIEVIKEFEDKVGYILFTNVDVEGLLKGINVDIIKE 183
Query: 252 LGKYSPIPVTYAGGVTTMADLEKIKVAGIGRVDVTVGSAL 291
L + + IP+ Y+GG+TT+ D++ +K GI V +GSAL
Sbjct: 184 LIEKTDIPIIYSGGITTLEDIKALKELGI--YGVVIGSAL 221
>sp|Q9KSW9|HIS4_VIBCH 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Vibrio cholerae
serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
GN=hisA PE=3 SV=1
Length = 245
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 108/241 (44%), Gaps = 23/241 (9%)
Query: 58 PCIDIHKGKVKQIVGSTLQDSKDDGTKLVTNFESDKSAAEFANLYKEDGLTGGHAIMLGA 117
P +D+ +G+V ++ D G VT ++ D AE NLY + G H + L
Sbjct: 4 PALDLIEGQVVRLY------QGDYGQ--VTEYKVDP--AEQFNLYHQAGAGWLHLVDLTG 53
Query: 118 DPLSKAAAI----EALHAYPGGLQVGGGINSDNSL-SYIEEGATHVIVTSYVFNNGQMDL 172
+ A + L + P +Q+GGG+ S+ + +E GA V+V S Q+
Sbjct: 54 AKNTAARQLNLIARLLASTPANIQIGGGVRSEQDVVDLLEAGAQRVVVGSTAVKQPQL-- 111
Query: 173 ERLKDLVRVVGKQRLVLDLSCR-KKDGKYAIVTDRWQKFSDVYLDERVLDFLASYADEFL 231
+K + G +++VL L + G + WQ+ S V ++ + D+L L
Sbjct: 112 --VKSWIEKYGAEKIVLALDINIDEQGTRKVAISGWQEDSGVTIEALIDDYLTVGLQHVL 169
Query: 232 VHGVDVEGKKLGIDDELVA-LLGKYSPIPVTYAGGVTTMADLEKIKVAGIGRVDVTVGSA 290
+ +G G + EL L +Y + +GG+ ++AD+E +K G G V VG A
Sbjct: 170 CTDISRDGTLAGSNVELYRDLCRQYPQVQFQSSGGIGSLADIEALK--GTGVAGVIVGRA 227
Query: 291 L 291
L
Sbjct: 228 L 228
>sp|Q87QK7|HIS4_VIBPA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Vibrio
parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
GN=hisA PE=3 SV=1
Length = 245
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 118/259 (45%), Gaps = 24/259 (9%)
Query: 58 PCIDIHKGKVKQIVGSTLQDSKDDGTKLVTNFESDKSAAEFANLYKEDGLTGGHAIMLGA 117
P +D+ +G+V ++ D G VT ++ D AE NLY + G H + L
Sbjct: 4 PALDLIEGQVVRLY------QGDYGQ--VTEYKVDP--AEQFNLYHQAGADWLHLVDLTG 53
Query: 118 DPLSKAAAIEA----LHAYPGGLQVGGGINSDNSL-SYIEEGATHVIVTSYVFNNGQMDL 172
+ A ++ L + P +Q+GGG+ ++ + +E GA V+V S ++
Sbjct: 54 AKDTSARQLDLIAKLLASTPANIQIGGGVRTEQDVVDLLEAGAQRVVVGSTAVKQPEL-- 111
Query: 173 ERLKDLVRVVGKQRLVLDLSCR-KKDGKYAIVTDRWQKFSDVYLDERVLDFLASYADEFL 231
+K + G +++VL L +DG + WQ+ S V ++ + D+L L
Sbjct: 112 --VKGWMEKYGAEKIVLALDINIDQDGTRKVAISGWQEDSGVTIEALINDYLTVGLQHVL 169
Query: 232 VHGVDVEGKKLGIDDEL-VALLGKYSPIPVTYAGGVTTMADLEKIKVAGIGRVDVTVGSA 290
+ +G G + EL V L +Y + +GG+ ++AD+E +K G G V VG A
Sbjct: 170 CTDISRDGTLEGSNVELYVDLCKQYPQVQFQSSGGIGSLADIEALK--GSGVAGVIVGRA 227
Query: 291 LDIFGGNLAYKDVVAWHAQ 309
L + G A + W ++
Sbjct: 228 L-LDGKFTAEEAFACWQSE 245
>sp|P62357|HIS4_METMP 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Methanococcus
maripaludis (strain S2 / LL) GN=hisA PE=3 SV=1
Length = 241
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 91/173 (52%), Gaps = 19/173 (10%)
Query: 136 LQVGGGINSDNSLSY-IEEGATHVIVTSYVFNNGQMDLERLKDLVRVVGKQRLVLDLSCR 194
+Q+GGGI S Y +E+GA VI+ + N ++ +K+L + +G +++++ L
Sbjct: 77 VQIGGGIRSIEDAEYLVEKGAKKVIIGTIAVENPEI----IKELSKRIGSEKIMVSLDA- 131
Query: 195 KKDGKYAIVTDRWQ---KFSDVYLDERVLDFLASYADEFLVHGVDVEGKKLGIDDELVAL 251
KDGK +V W+ K++ V + ++L+ + A L VD EG GI+ E
Sbjct: 132 -KDGK--VVIKGWKEKTKYTPVQIG-KILEEMG--AGSILFTNVDSEGLLNGINIEPTKE 185
Query: 252 LGKYSPIPVTYAGGVTTMADLEKIKVAGIGRVDVTVGSALDIFGGNLAYKDVV 304
L IP+ +GGVTT+ DL K+K IG V VGSA I+ + KD +
Sbjct: 186 LVDNLKIPIVASGGVTTIDDLLKLK--EIGVYGVVVGSA--IYKNMINLKDAI 234
>sp|Q8D8Q4|HIS4_VIBVU 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Vibrio vulnificus
(strain CMCP6) GN=hisA PE=3 SV=1
Length = 245
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 117/259 (45%), Gaps = 24/259 (9%)
Query: 58 PCIDIHKGKVKQIVGSTLQDSKDDGTKLVTNFESDKSAAEFANLYKEDGLTGGHAIMLGA 117
P +D+ +G+V ++ D G VT ++ D AE NLY + G H + L
Sbjct: 4 PALDLIEGQVVRLY------QGDYGQ--VTEYKVDP--AEQFNLYHQAGANWLHLVDLTG 53
Query: 118 DPLSKAAAIEA----LHAYPGGLQVGGGINSDNS-LSYIEEGATHVIVTSYVFNNGQMDL 172
+ A ++ L + P +Q+GGG+ ++ + +E GA V+V S ++
Sbjct: 54 AKDTTARQLDLIAKLLASTPANIQIGGGVRTEQDVIDLLEAGAQRVVVGSTAVKQPEL-- 111
Query: 173 ERLKDLVRVVGKQRLVLDLSCR-KKDGKYAIVTDRWQKFSDVYLDERVLDFLASYADEFL 231
+K + G +++VL L +DG + WQ+ S V ++ + D+L L
Sbjct: 112 --VKGWMEKYGAEKIVLALDINIDQDGTRKVAISGWQEDSGVTIEALINDYLTVGLQHVL 169
Query: 232 VHGVDVEGKKLGIDDEL-VALLGKYSPIPVTYAGGVTTMADLEKIKVAGIGRVDVTVGSA 290
+ +G G + EL V L +Y + +GG+ ++ D+E +K G G V VG A
Sbjct: 170 CTDISRDGTLEGSNVELYVDLCKQYPQVQFQSSGGIGSLTDIEALK--GSGVAGVIVGRA 227
Query: 291 LDIFGGNLAYKDVVAWHAQ 309
L + G A + W ++
Sbjct: 228 L-LDGKFTAEEAFACWQSE 245
>sp|P62355|HIS4_PHOPR 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Photobacterium
profundum GN=hisA PE=3 SV=1
Length = 244
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 106/241 (43%), Gaps = 23/241 (9%)
Query: 58 PCIDIHKGKVKQIVGSTLQDSKDDGTKLVTNFESDKSAAEFANLYKEDGLTGGHAIMLGA 117
P +D+ G+V ++ D G VT ++ D AE LY + G H + L
Sbjct: 4 PALDLINGQVVRLF------QGDYGQ--VTEYKVDP--AEQFKLYNQAGANWLHLVDLTG 53
Query: 118 DPLSKAAAI----EALHAYPGGLQVGGGINSDNSLS-YIEEGATHVIVTSYVFNNGQMDL 172
+ A + + L + P +Q+GGG+ S+ +S +E GA V++ S +M
Sbjct: 54 AKDTSARQLDLISQLLASTPANIQIGGGVRSEKDVSDLLEAGAQRVVIGSTAVKQPEM-- 111
Query: 173 ERLKDLVRVVGKQRLVLDLSCR-KKDGKYAIVTDRWQKFSDVYLDERVLDFLASYADEFL 231
+K + G + +VL L KDG + WQ+ S V ++ + DFL L
Sbjct: 112 --VKGWMEKYGPEHIVLALDVNIDKDGNRNVAISGWQEDSGVSIEALLDDFLTVGLKHVL 169
Query: 232 VHGVDVEGKKLGIDDEL-VALLGKYSPIPVTYAGGVTTMADLEKIKVAGIGRVDVTVGSA 290
+ +G G + EL V L +Y + +GG+ + D+ +K G G V VG A
Sbjct: 170 CTDISRDGTLAGSNVELYVDLCAQYPQVQFQSSGGIGDLNDIAALK--GSGVAGVIVGRA 227
Query: 291 L 291
L
Sbjct: 228 L 228
>sp|P05324|HIS4_METVA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Methanococcus
vannielii GN=hisA PE=3 SV=1
Length = 238
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 92/175 (52%), Gaps = 29/175 (16%)
Query: 136 LQVGGGINS-DNSLSYIEEGATHVIVTSYVFNNGQMDLERLKDLVRVVGKQRLVLDLSCR 194
+Q+GGGI S ++L +IE+GA VI+ + N ++ ++++ +VGK+++ + L
Sbjct: 77 VQIGGGIRSVSDALYFIEKGAEKVILGTVAIQNPKI----VREISSIVGKEKVTVALDA- 131
Query: 195 KKDGKYAIVTDRWQKFSDVYLDERVLDFLASY-ADEFLVHGVDVEGKKLGID----DELV 249
KDGK ++ W + +D Y ++ L + A L VD EG GI+ ELV
Sbjct: 132 -KDGK--VLIKGWTEKTD-YSPVQIGKILENMGAGSILFTNVDSEGLLEGINVLPTKELV 187
Query: 250 ALLGKYSPIPVTYAGGVTTMADLEKIKVAGIGRVDVTVGSALDIFGGNLAYKDVV 304
L IP+ +GGVTT+ DL K K IG V VGSAL YKD++
Sbjct: 188 DNLN----IPIIASGGVTTVEDLLKFK--EIGVYAVVVGSAL--------YKDMI 228
>sp|A6VJ52|HIS4_METM7 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Methanococcus
maripaludis (strain C7 / ATCC BAA-1331) GN=hisA PE=3
SV=1
Length = 238
Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 88/160 (55%), Gaps = 17/160 (10%)
Query: 136 LQVGGGINS-DNSLSYIEEGATHVIVTSYVFNNGQMDLERLKDLVRVVGKQRLVLDLSCR 194
+Q+GGGI S ++++ IE+GA VI+ + N ++ +++L + +G +++++ L
Sbjct: 77 VQIGGGIRSIEDAVYLIEKGAEKVIIGTVAVENPEI----IRELSKKIGSEKIMVSLDA- 131
Query: 195 KKDGKYAIVTDRWQ---KFSDVYLDERVLDFLASYADEFLVHGVDVEGKKLGIDDELVAL 251
KDGK +V W+ K++ V + ++L+ + A L VD EG GI+ E
Sbjct: 132 -KDGK--VVIKGWKEKTKYTPVEIG-KILEEMG--AGSILFTNVDSEGLLNGINIEPTKE 185
Query: 252 LGKYSPIPVTYAGGVTTMADLEKIKVAGIGRVDVTVGSAL 291
L IP+ +GGVTT+ DL K K IG V VGSA+
Sbjct: 186 LVDNLKIPIVASGGVTTIDDLLKFK--KIGVYGVVVGSAI 223
>sp|A6US29|HIS4_METVS 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Methanococcus
vannielii (strain SB / ATCC 35089 / DSM 1224) GN=hisA
PE=3 SV=1
Length = 238
Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 92/175 (52%), Gaps = 29/175 (16%)
Query: 136 LQVGGGINS-DNSLSYIEEGATHVIVTSYVFNNGQMDLERLKDLVRVVGKQRLVLDLSCR 194
+Q+GGGI S ++L +IE+GA VI+ + N ++ ++++ +VGK+++ + L
Sbjct: 77 VQIGGGIRSVSDALYFIEKGAEKVILGTVAIQNPKI----VREISSIVGKEKVTVALDA- 131
Query: 195 KKDGKYAIVTDRWQKFSDVYLDERVLDFLASY-ADEFLVHGVDVEGKKLGID----DELV 249
KDGK ++ W + +D Y ++ L + A L VD EG GI+ ELV
Sbjct: 132 -KDGK--VLIKGWTEKTD-YSPVQIGKILENMGAGSILFTNVDSEGLLEGINVLPTKELV 187
Query: 250 ALLGKYSPIPVTYAGGVTTMADLEKIKVAGIGRVDVTVGSALDIFGGNLAYKDVV 304
L IP+ +GGVTT+ DL K K IG V VGSAL YKD++
Sbjct: 188 DNLN----IPIIASGGVTTVEDLLKFK--EIGVYAVVVGSAL--------YKDMI 228
>sp|A1W1K3|HIS4_CAMJJ 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Campylobacter
jejuni subsp. jejuni serotype O:23/36 (strain 81-176)
GN=hisA PE=3 SV=1
Length = 243
Score = 58.2 bits (139), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 111/240 (46%), Gaps = 24/240 (10%)
Query: 58 PCIDIHKGKVKQIVGSTLQDSKDDGTKLVTNF-ESDKSAAEFANLYKEDGLTGGHAIMLG 116
P +D+ G+V ++V + K + F E +K+ A+ +L LTG
Sbjct: 6 PALDLIDGEVVRLVKGDYEQKKVYKYNPLEKFKEYEKAGAKELHLVD---LTGAK----- 57
Query: 117 ADPLSKAAA-IEAL-HAYPGGLQVGGGINSDNSL-SYIEEGATHVIVTSYVFNNGQMDLE 173
DP + A IE L LQVGGGI S + + ++ G V++ S N + LE
Sbjct: 58 -DPSKRQLALIEKLAKEVSVNLQVGGGIRSKEEVKALLDCGVKRVVIGSMAIKNATLCLE 116
Query: 174 RLKDLVRVVGKQRLVLDLSCRKKDGKYAIVTDRWQKFSDVYLDERVLDFLASYA-DEFLV 232
LK+ G + +VL L K+ Y + + WQ+ SD L E VLDF ++ L
Sbjct: 117 ILKEF----GSEAIVLALDTILKE-DYVVAVNAWQEASDKKLME-VLDFYSNKGLKHILC 170
Query: 233 HGVDVEGKKLGIDDELVALLGKYSP-IPVTYAGGVTTMADLEKIKVAGIGRVDVTVGSAL 291
+ +G G++ L L+ + P I + +GGV ++ DLE +K G V VG AL
Sbjct: 171 TDISKDGTMQGVNVRLYKLIHEIFPNICIQASGGVASLKDLENLKGICSG---VIVGKAL 227
>sp|B8GJY2|HIS4_METPE 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Methanosphaerula
palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c)
GN=hisA PE=3 SV=1
Length = 236
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 107/239 (44%), Gaps = 27/239 (11%)
Query: 58 PCIDIHKGKVKQIVGSTLQDSKDDGTKLVTNFESDKSAAEFANLYKEDGLTGGHAIML-G 116
P +DI G+ Q+V + + D G L A + E+G T H I L G
Sbjct: 5 PAVDILGGRCVQLVQGRRESATDFGDPL-----------SCATQWLEEGATALHVINLDG 53
Query: 117 A--DPLSKAAAIEALHAYPG-GLQVGGGINS-DNSLSYIEEGATHVIVTSYVFNNGQMDL 172
A + AA I L G +Q+GGGI S ++ +++E G +I+ + +
Sbjct: 54 AFGKAQANAALIRDLVDVTGVEVQLGGGIRSIADATAWLETGVDRIIIGTLATEH----P 109
Query: 173 ERLKDLVRVVGKQRLVLDLSCRKKDGKYAIVTDRWQKFSDVYLDERVLDFLASYADEFLV 232
E L L G R++ + R DG+ A+ + WQ+ + F A L
Sbjct: 110 EVLGTLASEYGGARIMAGVDAR--DGQIAV--EGWQQTRGNFCT-WATRFEEQGAGSLLY 164
Query: 233 HGVDVEGKKLGIDDELVALLGKYSPIPVTYAGGVTTMADLEKIKVAGIGRVDVTVGSAL 291
VD+EG + G+ + V L + IPV AGGV++ ADL+ + AG+ +GSAL
Sbjct: 165 TNVDIEGLQQGVRLDPVKELIRMVSIPVVVAGGVSSPADLQGLHQAGV--AGAVLGSAL 221
>sp|A5V9V9|HIS4_SPHWW 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Sphingomonas
wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=hisA
PE=3 SV=1
Length = 243
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 107/243 (44%), Gaps = 31/243 (12%)
Query: 58 PCIDIHKGKVKQIVGSTLQDSK---DDGTKLVTNFESDKSAAEFANLYKEDGLTGGHAIM 114
P ID+ G+V ++ + + DD F ++ AE+ ++ DG G A+
Sbjct: 7 PAIDLKGGQVVRLAEGDMDRATVYGDDPADQARRFA--EAGAEWLHVVDLDGAFAGRAV- 63
Query: 115 LGADPLSKAAAIEAL-HAYPGGLQVGGGINSDNSLS-YIEEGATHVIVTSYVFNNGQMDL 172
A A+EA+ A+PG +++GGGI + ++ G VI+ + N
Sbjct: 64 -------NAEAVEAIIKAFPGKVELGGGIRDRAGIDRWLALGVERVIIGTAALQN----- 111
Query: 173 ERLKDLVRVVGKQ---RLVLDLSCRKKDGKYAIVTDRWQKFSDVYLDERVLDFLASYADE 229
DLVR K+ R+V+ + R DG A T W + S V + + F +
Sbjct: 112 ---PDLVREAAKELPGRIVVGVDAR--DGFVA--THGWAEVSTVGITDLADRFADAGVAS 164
Query: 230 FLVHGVDVEGKKLGIDDELVALLGKYSPIPVTYAGGVTTMADLEK-IKVAGIGRVDVTVG 288
L V +G G + E L +++ IPV +GGV ++AD+ + AG G V G
Sbjct: 165 LLFTDVGRDGLLKGCNVEATVALARHASIPVIASGGVASIADIAALVPHAGDGIEGVITG 224
Query: 289 SAL 291
AL
Sbjct: 225 RAL 227
>sp|Q2FN18|HIS4_METHJ 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Methanospirillum
hungatei (strain JF-1 / DSM 864) GN=hisA PE=3 SV=1
Length = 236
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 106/235 (45%), Gaps = 19/235 (8%)
Query: 58 PCIDIHKGKVKQIVGSTLQDSKDDGTKLVTNFESDKSAAEFANLYKEDGLTGGHAIMLGA 117
P +DI G+ Q+V + + G L+ AE ++ DG G+
Sbjct: 5 PAVDILGGRCVQLVQGKRETATSYGDPLLCAESWINQGAEALHIVNLDG-------AFGS 57
Query: 118 DPLSKAAAIEALHAYPGGLQVGGGINS-DNSLSYIEEGATHVIVTSYVFNNGQMDLERLK 176
L+ + + Q+GGGI S D++ S+++ G +I++++ + D E L
Sbjct: 58 SKLNAEKITDVIIRTGVKTQLGGGIRSLDDARSWLDCGVDRIIISTFAAD----DPECLT 113
Query: 177 DLVRVVGKQRLVLDLSCRKKDGKYAIVTDRWQKFSDVYLDERVLDFLASYADEFLVHGVD 236
L G R++ + R + +VT W++ + +L+ L F+ A L V
Sbjct: 114 ILSEEYGSDRIMAGVDARAGE----MVTHGWERPAGDFLEWADL-FIRKGAGSLLYTNVS 168
Query: 237 VEGKKLGIDDELVALLGKYSPIPVTYAGGVTTMADLEKIKVAGIGRVDVTVGSAL 291
VEG GID + + L +PV AGG+T+ +D++ +K A V +GSAL
Sbjct: 169 VEGLCNGIDPKPIRDLLSTVSVPVVVAGGITSPSDIKILKEA--DAAGVVLGSAL 221
>sp|C5BMF4|HIS4_TERTT 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Teredinibacter
turnerae (strain ATCC 39867 / T7901) GN=hisA PE=3 SV=1
Length = 245
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 110/261 (42%), Gaps = 34/261 (13%)
Query: 58 PCIDIHKGKVKQIVGSTLQDSKDDGTKLVTNFESDKSAAEFANLYKEDGLTGGHAIML-- 115
P ID+ G ++ + DS T F D A FA + + G H + L
Sbjct: 5 PAIDLKDGNCVRLRQGLMDDS--------TVFGEDPVA--FARQWVDKGARRLHLVDLNG 54
Query: 116 --GADPLSKAAAIEALHAYPG-GLQVGGGINSDNSLS-YIEEGATHVIVTSYVFNNGQMD 171
P++ A+P +Q+GGGI S ++ Y++ G +VI+ + +
Sbjct: 55 AFAGKPVNGDVVTAIAKAFPELPIQIGGGIRSAETIEHYLQAGVNYVIIGTKAVKEPEFV 114
Query: 172 LERLKDLVRVVGKQRLVLDLSCRKKDGKYAIVTDRWQKFSDVYLDERVLDFLASYADEFL 231
E K + G + LD K+G A TD W + S+V + F + E +
Sbjct: 115 TEMCK---QFAGHIIVGLD----AKNGFVA--TDGWAEVSEVKATDLAARFASDGVTEIV 165
Query: 232 VHGVDVEGKKLGIDDELVALLGKYSPIPVTYAGGVTTMADLEKI-KVAGIGRVDVTVGSA 290
+ +G G++ E + K SPIPV +GG+T M D+ + KVA G G A
Sbjct: 166 YTDIARDGMMQGVNVEATVDMAKASPIPVIASGGITDMNDIRALAKVASAGISGAITGRA 225
Query: 291 LDIFGGNL------AYKDVVA 305
I+ G L AY D+V+
Sbjct: 226 --IYEGTLDIVEAQAYCDIVS 244
>sp|Q6AF73|HIS6_LEIXX Imidazole glycerol phosphate synthase subunit HisF OS=Leifsonia
xyli subsp. xyli (strain CTCB07) GN=hisF PE=3 SV=1
Length = 254
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 98/236 (41%), Gaps = 25/236 (10%)
Query: 52 CAVRFRPCIDIHKGKVKQIVGSTLQDSKDDGTKLVTNFESDKSAAEFANLYKEDGLTGGH 111
AVR PC+D+ G+V + G Q+ +D G + EFA Y E G
Sbjct: 3 VAVRVIPCLDVAAGRV--VKGVNFQNLRDQGDPV-----------EFARRYAEQGADELT 49
Query: 112 AIMLGADPLSKAAAIEALHAYPGG----LQVGGGINSDNSLS-YIEEGATHVIVTSYVFN 166
+ + A ++ + + A G L VGGG+ S ++ + GA V V S
Sbjct: 50 FLDVTATVDDRSTTYDVVRATAGQVFIPLTVGGGVRSTEDVARLLGSGADKVGVNSAAIA 109
Query: 167 NGQMDLERLKDLVRVVGKQRLVLDLSCRKK---DGKYAIVTDRWQKFSDVYLDERVLDFL 223
+ + ++ G Q LVL L ++ D +A+ T + + + E +
Sbjct: 110 RPGL----VAEIADRFGAQVLVLSLDVKRSASTDSGFAVTTHGGRTETGLDALEWAARAI 165
Query: 224 ASYADEFLVHGVDVEGKKLGIDDELVALLGKYSPIPVTYAGGVTTMADLEKIKVAG 279
A E LV+ +D +G K G D EL+ + S +PV +GG AD AG
Sbjct: 166 ELGAGELLVNSIDADGTKEGFDLELIREMRALSAVPVIASGGAGKTADFAPALRAG 221
>sp|A2SQR0|HIS4_METLZ 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Methanocorpusculum
labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=hisA
PE=3 SV=1
Length = 236
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 110/250 (44%), Gaps = 29/250 (11%)
Query: 58 PCIDIHKGKVKQIVGSTLQDSKDDGTKLVTNFESDKSAAEFANLYKEDGLTGGHAIML-G 116
P +DI G Q+VG G +L S + A + +G + H + L G
Sbjct: 5 PAVDILSGNCVQLVG---------GDRLTATVYG--SPMDNARRWISEGASNLHVVNLDG 53
Query: 117 ADPLSKAAA---IEALHAYPGGLQVGGGINS-DNSLSYIEEGATHVIVTSYVFNNGQMDL 172
A S A E + +QVGGGI S +++ ++ G +I++++ +
Sbjct: 54 AFTASTTNAEMIREVVEKTDVFVQVGGGIRSLEDARGWLNCGVARIILSTFATREPAV-- 111
Query: 173 ERLKDLVRVVGKQRLVLDLSCRKKDGKYAIVTDRWQKFSDVYLDERVLDFLASYADEFLV 232
++ L + G +R++ + R+ + I WQ+ + ++ F A L
Sbjct: 112 --IRTLSKEFGSERIMAGVDARRGE----IAVSGWQELAGDFI-VWAQKFEELGAGSLLY 164
Query: 233 HGVDVEGKKLGIDDELVALLGKYSPIPVTYAGGVTTMADLEKIKVAGIGRVDVTVGSALD 292
VDVEG++ GID E V L IPV AGGVTT D+ +K +G +GSAL
Sbjct: 165 TNVDVEGQQAGIDIEPVQKLLDAVDIPVIVAGGVTTSQDVTALK--QLGASGCVLGSAL- 221
Query: 293 IFGGNLAYKD 302
+ G + K+
Sbjct: 222 -YSGRITLKE 230
>sp|Q9PM74|HIS4_CAMJE 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Campylobacter
jejuni subsp. jejuni serotype O:2 (strain NCTC 11168)
GN=hisA PE=1 SV=1
Length = 243
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 111/240 (46%), Gaps = 24/240 (10%)
Query: 58 PCIDIHKGKVKQIVGSTLQDSKDDGTKLVTNF-ESDKSAAEFANLYKEDGLTGGHAIMLG 116
P +D+ G+V ++V + K + F E +K+ A+ +L LTG
Sbjct: 6 PALDLIDGEVVRLVKGDYEQKKVYKYNPLKKFKEYEKAGAKELHLVD---LTGAK----- 57
Query: 117 ADPLSKA-AAIEAL-HAYPGGLQVGGGINSDNSL-SYIEEGATHVIVTSYVFNNGQMDLE 173
DP + A IE L LQVGGGI S + + ++ G V++ S + + LE
Sbjct: 58 -DPSKRQFALIEKLAKEVSVNLQVGGGIRSKEEVKALLDCGVKRVVIGSMAIKDATLCLE 116
Query: 174 RLKDLVRVVGKQRLVLDLSCRKKDGKYAIVTDRWQKFSDVYLDERVLDFLASYA-DEFLV 232
LK+ G + +VL L K+ Y + + WQ+ SD L E VLDF ++ L
Sbjct: 117 ILKEF----GSEAIVLALDTILKE-DYVVAVNAWQEASDKKLME-VLDFYSNKGLKHILC 170
Query: 233 HGVDVEGKKLGIDDELVALLGKYSP-IPVTYAGGVTTMADLEKIKVAGIGRVDVTVGSAL 291
+ +G G++ L L+ + P I + +GGV ++ DLE +K G V VG AL
Sbjct: 171 TDISKDGTMQGVNVRLYKLIHEIFPNICIQASGGVASLKDLENLKGICSG---VIVGKAL 227
>sp|A9A6L5|HIS4_METM6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Methanococcus
maripaludis (strain C6 / ATCC BAA-1332) GN=hisA PE=3
SV=1
Length = 238
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 87/160 (54%), Gaps = 17/160 (10%)
Query: 136 LQVGGGINS-DNSLSYIEEGATHVIVTSYVFNNGQMDLERLKDLVRVVGKQRLVLDLSCR 194
+Q+GGGI S ++++ +E+GA VI+ + N ++ +K+L +G +++++ L
Sbjct: 77 VQIGGGIRSIEDAVYLVEKGAKKVIIGTVAVENPEI----IKELSEKIGSEKIMVSLDA- 131
Query: 195 KKDGKYAIVTDRWQ---KFSDVYLDERVLDFLASYADEFLVHGVDVEGKKLGIDDELVAL 251
K+GK +V W+ K++ V + ++L+ + A L VD EG GI+ E
Sbjct: 132 -KNGK--VVIKGWKEKTKYTPVEIG-KILEEMG--AGSILFTNVDSEGLLNGINIEPTKE 185
Query: 252 LGKYSPIPVTYAGGVTTMADLEKIKVAGIGRVDVTVGSAL 291
L IP+ +GGVTT+ DL K K IG V VGSA+
Sbjct: 186 LVDNLKIPIVASGGVTTIDDLLKFK--EIGVYGVVVGSAI 223
>sp|A4FZ85|HIS4_METM5 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Methanococcus
maripaludis (strain C5 / ATCC BAA-1333) GN=hisA PE=3
SV=1
Length = 238
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 92/173 (53%), Gaps = 19/173 (10%)
Query: 136 LQVGGGINS-DNSLSYIEEGATHVIVTSYVFNNGQMDLERLKDLVRVVGKQRLVLDLSCR 194
+Q+GGGI S ++++ +E+GA VI+ + ++ +K+L +G +++++ L
Sbjct: 77 VQIGGGIRSIEDAVYLVEKGAKKVIIGTIAVEKPEI----IKELSENIGSEKIMVSLDA- 131
Query: 195 KKDGKYAIVTDRWQ---KFSDVYLDERVLDFLASYADEFLVHGVDVEGKKLGIDDELVAL 251
KDGK +V W+ K++ V + ++L+ + A L VD EG GI+ E
Sbjct: 132 -KDGK--VVIKGWKEKTKYTPVEIG-KILEEMG--AGSILFTNVDSEGLLNGINIEPTKE 185
Query: 252 LGKYSPIPVTYAGGVTTMADLEKIKVAGIGRVDVTVGSALDIFGGNLAYKDVV 304
L + IP+ +GGVTT+ DL K K IG V VGSA I+ + KD +
Sbjct: 186 LVENLKIPIVASGGVTTIDDLLKFK--EIGVYGVVVGSA--IYKNMINLKDAI 234
>sp|A1JTW2|HIS4_YERE8 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Yersinia
enterocolitica serotype O:8 / biotype 1B (strain 8081)
GN=hisA PE=3 SV=1
Length = 245
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 112/258 (43%), Gaps = 26/258 (10%)
Query: 58 PCIDIHKGKVKQIVGSTLQDSKDDGTKLVTNFESDKSAAEFANLYKEDGLTGGHAI-MLG 116
P +D+ +GKV ++ +D G + + Y++ G H + + G
Sbjct: 4 PALDLIEGKVVRLHQGDYGQQRDYGNHPLPRLQD----------YQQQGAQVLHLVDLTG 53
Query: 117 A-DPLSKAAAI--EALHAYPGGLQVGGGI-NSDNSLSYIEEGATHVIVTSYVFNNGQMDL 172
A DP ++ + E L +QVGGGI N + ++ +E GAT V+V S M
Sbjct: 54 AKDPAARQIPLLRELLAGVDVPVQVGGGIRNEQDVVALLEAGATRVVVGSTAVKQPAM-- 111
Query: 173 ERLKDLVRVVGKQRLVLDLSCRKKD-GKYAIVTDRWQKFSDVYLDERVLDFLASYADEFL 231
++ G + +VL L R D G+ + WQ+ SD L++ V +L L
Sbjct: 112 --VQQWFERYGAEAIVLALDVRINDAGRKEVAISGWQENSDTTLEQIVEQYLPFGLKHVL 169
Query: 232 VHGVDVEGKKLGIDDELVA-LLGKYSPIPVTYAGGVTTMADLEKIKVAGIGRVDVTVGSA 290
+ +G G + EL + +Y + +GG+ + D+ +++ +G+ V VG A
Sbjct: 170 CTDISRDGTLSGSNVELYQEVCQRYPQVAFQASGGIGCLDDIARLRSSGVQ--GVIVGRA 227
Query: 291 LDIFGGNLAYKDVVA-WH 307
L G K+ +A W
Sbjct: 228 L--LDGKFNVKEAIACWQ 243
>sp|A8FNR3|HIS4_CAMJ8 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Campylobacter
jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC
11828) GN=hisA PE=3 SV=1
Length = 244
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 111/240 (46%), Gaps = 24/240 (10%)
Query: 58 PCIDIHKGKVKQIVGSTLQDSKDDGTKLVTNF-ESDKSAAEFANLYKEDGLTGGHAIMLG 116
P +D+ G+V ++V + K + F E +K+ A+ +L LTG
Sbjct: 6 PALDLIDGEVVRLVKGDYEQKKVYKYNPLEKFKEYEKAGAKELHLVD---LTGAK----- 57
Query: 117 ADPLSKAAA-IEALHAYPG-GLQVGGGINSDNSL-SYIEEGATHVIVTSYVFNNGQMDLE 173
DP + A IE L LQVGGGI S + + ++ G V++ S + + LE
Sbjct: 58 -DPSKRQLALIEKLAKEVNVNLQVGGGIRSKEEVKALLDCGVKRVVIGSMAIKDATLCLE 116
Query: 174 RLKDLVRVVGKQRLVLDLSCRKKDGKYAIVTDRWQKFSDVYLDERVLDFLASYA-DEFLV 232
LK+ G + +VL L K+ Y + + WQ+ SD L E VLDF ++ L
Sbjct: 117 ILKEF----GSEAIVLALDTILKE-DYVVAVNAWQEASDKKLME-VLDFYSNKGLKHILC 170
Query: 233 HGVDVEGKKLGIDDELVALLGKYSP-IPVTYAGGVTTMADLEKIKVAGIGRVDVTVGSAL 291
+ +G G++ L L+ + P I + +GGV ++ DLE +K G V VG AL
Sbjct: 171 TDISKDGTMQGVNVRLYKLIHEIFPNICIQASGGVASLKDLENLKGICSG---VIVGKAL 227
>sp|Q5HSJ0|HIS4_CAMJR 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Campylobacter
jejuni (strain RM1221) GN=hisA PE=3 SV=1
Length = 243
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 111/240 (46%), Gaps = 24/240 (10%)
Query: 58 PCIDIHKGKVKQIVGSTLQDSKDDGTKLVTNF-ESDKSAAEFANLYKEDGLTGGHAIMLG 116
P +D+ G+V ++V + K + F E +K+ A+ +L LTG
Sbjct: 6 PALDLIDGEVVRLVKGDYEQKKVYKYNPLKKFKEYEKAGAKELHLVD---LTGAK----- 57
Query: 117 ADPLSKA-AAIEAL-HAYPGGLQVGGGINSD-NSLSYIEEGATHVIVTSYVFNNGQMDLE 173
DP + A IE L LQVGGGI S + + ++ G V++ S + + LE
Sbjct: 58 -DPSKRQFALIEKLAKEVSVNLQVGGGIRSKAEARALLDCGVKRVVIGSMAIKDATLCLE 116
Query: 174 RLKDLVRVVGKQRLVLDLSCRKKDGKYAIVTDRWQKFSDVYLDERVLDFLASYA-DEFLV 232
LK+ G + +VL L K+ Y + + WQ+ SD L E VLDF ++ L
Sbjct: 117 ILKEF----GSEAIVLALDTILKE-DYVVAVNAWQEASDKKLME-VLDFYSNKGLKHILC 170
Query: 233 HGVDVEGKKLGIDDELVALLGKYSP-IPVTYAGGVTTMADLEKIKVAGIGRVDVTVGSAL 291
+ +G G++ L L+ + P I + +GGV ++ DLE +K G V VG AL
Sbjct: 171 TDISKDGTMQGVNARLYKLIHEIFPHICIQASGGVASLKDLENLKGICSG---VIVGKAL 227
>sp|P44435|HIS4_HAEIN 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=hisA PE=3 SV=1
Length = 249
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 20/211 (9%)
Query: 91 SDKSAAEFANLYKEDGLTGGHAI-MLGA-DPLSKAAAI--EALHAYPGGLQVGGGINSDN 146
SD +F N Y G H + + GA +P S+ A+ + + A +QVGGGI ++
Sbjct: 32 SDNPIKQFDN-YVRQGAKQLHLVDLTGAKNPQSRQTALIGKIVEATQCKVQVGGGIRTEQ 90
Query: 147 SLS-YIEEGATHVIVTSYVFNNGQMDLERLKDLVRVVGKQRLVLDLSCR-KKDGKYAIVT 204
++ + GA V++ S + M +K+ G ++ VL L G+ +
Sbjct: 91 DVADLLAVGANRVVIGSTAVTHRSM----VKNWFIKYGAEKFVLALDVNINASGQKIVAI 146
Query: 205 DRWQKFSDVYLDERVLDFLASYADEFLVHGVD----VEGKKLGIDDELVALLGKYSPIPV 260
WQ+ S V L+ + DF + L + + G +G+ E+ KY PI
Sbjct: 147 SGWQEESGVLLETLIEDFQTVGLQQVLCTDISRDGTLTGSNIGLYQEICE---KYPPIQF 203
Query: 261 TYAGGVTTMADLEKIKVAGIGRVDVTVGSAL 291
+GG+ ++AD+E +K G G V VG AL
Sbjct: 204 QSSGGIGSLADIEALK--GTGVSGVIVGRAL 232
>sp|A5UGY5|HIS4_HAEIG 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Haemophilus
influenzae (strain PittGG) GN=hisA PE=3 SV=1
Length = 249
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 20/211 (9%)
Query: 91 SDKSAAEFANLYKEDGLTGGHAI-MLGA-DPLSKAAAI--EALHAYPGGLQVGGGINSDN 146
SD +F N Y G H + + GA +P S+ A+ + + A +QVGGGI ++
Sbjct: 32 SDNPIKQFDN-YVRQGAKQLHLVDLTGAKNPQSRQTALIGKIVEATQCKVQVGGGIRTEQ 90
Query: 147 SLS-YIEEGATHVIVTSYVFNNGQMDLERLKDLVRVVGKQRLVLDLSCR-KKDGKYAIVT 204
++ + GA V++ S + M +K+ G ++ VL L G+ +
Sbjct: 91 DVADLLAVGANRVVIGSTAVTHRSM----VKNWFIKYGAEKFVLALDVNINASGQKIVAI 146
Query: 205 DRWQKFSDVYLDERVLDFLASYADEFLVHGVD----VEGKKLGIDDELVALLGKYSPIPV 260
WQ+ S V L+ + DF + L + + G +G+ E+ KY PI
Sbjct: 147 SGWQEESGVLLETLIEDFQTVGLQQVLCTDISRDGTLTGSNIGLYQEICE---KYPPIQF 203
Query: 261 TYAGGVTTMADLEKIKVAGIGRVDVTVGSAL 291
+GG+ ++AD+E +K G G V VG AL
Sbjct: 204 QSSGGIGSLADIEALK--GTGVSGVIVGRAL 232
>sp|A5UA16|HIS4_HAEIE 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Haemophilus
influenzae (strain PittEE) GN=hisA PE=3 SV=1
Length = 249
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 20/211 (9%)
Query: 91 SDKSAAEFANLYKEDGLTGGHAI-MLGA-DPLSKAAAI--EALHAYPGGLQVGGGINSDN 146
SD +F N Y G H + + GA +P S+ A+ + + A +QVGGGI ++
Sbjct: 32 SDNPIKQFDN-YVRQGAKQLHLVDLTGAKNPQSRQTALIGKIVEATQCKVQVGGGIRTEQ 90
Query: 147 SLS-YIEEGATHVIVTSYVFNNGQMDLERLKDLVRVVGKQRLVLDLSCR-KKDGKYAIVT 204
++ + GA V++ S + M +K+ G ++ VL L G+ +
Sbjct: 91 DVADLLAVGANRVVIGSTAVTHRSM----VKNWFIKYGAEKFVLALDVNINASGQKIVAI 146
Query: 205 DRWQKFSDVYLDERVLDFLASYADEFLVHGVD----VEGKKLGIDDELVALLGKYSPIPV 260
WQ+ S V L+ + DF + L + + G +G+ E+ KY PI
Sbjct: 147 SGWQEESGVLLETLIEDFQTVGLQQVLCTDISRDGTLTGSNIGLYQEICE---KYPPIQF 203
Query: 261 TYAGGVTTMADLEKIKVAGIGRVDVTVGSAL 291
+GG+ ++AD+E +K G G V VG AL
Sbjct: 204 QSSGGIGSLADIEALK--GTGVSGVIVGRAL 232
>sp|Q4QN70|HIS4_HAEI8 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Haemophilus
influenzae (strain 86-028NP) GN=hisA PE=3 SV=1
Length = 249
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 20/211 (9%)
Query: 91 SDKSAAEFANLYKEDGLTGGHAI-MLGA-DPLSKAAAI--EALHAYPGGLQVGGGINSDN 146
SD +F N Y G H + + GA +P S+ A+ + + A +QVGGGI ++
Sbjct: 32 SDNPIKQFDN-YVRQGAKQLHLVDLTGAKNPQSRQTALIGKIVEATQCKVQVGGGIRTEQ 90
Query: 147 SLS-YIEEGATHVIVTSYVFNNGQMDLERLKDLVRVVGKQRLVLDLSCR-KKDGKYAIVT 204
++ + GA V++ S + M +K+ G ++ VL L G+ +
Sbjct: 91 DVADLLAVGANRVVIGSTAVTHRSM----VKNWFIKYGAEKFVLALDVNINASGQKIVAI 146
Query: 205 DRWQKFSDVYLDERVLDFLASYADEFLVHGVD----VEGKKLGIDDELVALLGKYSPIPV 260
WQ+ S V L+ + DF + L + + G +G+ E+ KY PI
Sbjct: 147 SGWQEESGVLLETLIEDFQTVGLQQVLCTDISRDGTLTGSNIGLYQEICE---KYPPIQF 203
Query: 261 TYAGGVTTMADLEKIKVAGIGRVDVTVGSAL 291
+GG+ ++AD+E +K G G V VG AL
Sbjct: 204 QSSGGIGSLADIEALK--GTGVSGVIVGRAL 232
>sp|O26931|HIS4_METTH 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=hisA PE=3 SV=2
Length = 239
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 103/240 (42%), Gaps = 28/240 (11%)
Query: 58 PCIDIHKGKVKQIVGS---TLQDSKDDGTKLVTNFESDKSAAEFANLYKEDGLTGGHAIM 114
P +DI GK Q+V T Q DD + +ES AE ++ DG G
Sbjct: 5 PAVDIKDGKCVQLVQGKPGTEQVVLDDPAGVAGRWES--LGAETIHVVDLDGALG----- 57
Query: 115 LGADPLSKAAAI--EALHAYPGGLQVGGGINS-DNSLSYIEEGATHVIVTSYVFNNGQMD 171
L K I E LQ+GGGI S + + ++ G VI+ + N +
Sbjct: 58 -----LEKNTGILKEITERVSVPLQIGGGIRSREYAGKLLDMGFERVILGTMAIENPAI- 111
Query: 172 LERLKDLVRVVGKQRLVLDLSCRKKDGKYAIVTDRWQKFSDVYLDERVLDFLASYADEFL 231
+++L G +R+++ L R +V W + +E F A L
Sbjct: 112 ---VEELAGEYGSERIMVSLDSRDS----RVVIRGWTEKVPFTAEEMARKFQERGAGSIL 164
Query: 232 VHGVDVEGKKLGIDDELVALLGKYSPIPVTYAGGVTTMADLEKIKVAGIGRVDVTVGSAL 291
VD EG G D + V+ L + IPV Y+GGV+++ DL ++ G G + V +GSA+
Sbjct: 165 FTNVDFEGLLSGFDLKPVSELVEAVEIPVIYSGGVSSLNDLRMLQ--GTGVMGVVIGSAI 222
>sp|Q0C639|HIS4_HYPNA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Hyphomonas
neptunium (strain ATCC 15444) GN=hisA PE=3 SV=1
Length = 241
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 103/239 (43%), Gaps = 24/239 (10%)
Query: 58 PCIDIHKGKVKQIVGSTLQDSKDDGTKLVTNFESDKSAAEFANLYKEDGLTGGHAIML-- 115
P ID+ G +++ + + T F +D A+ A + G T H + L
Sbjct: 7 PAIDLKDGACVRLLRGEMDAA--------TVFNTDP--ADQARAFHAMGFTHLHVVDLNG 56
Query: 116 --GADPLSKAAAIEALHAYPGGLQVGGGINSDNSL-SYIEEGATHVIVTSYVFNNGQMDL 172
P+++AA L A P +Q+GGGI + + +++E G + VI+ + D
Sbjct: 57 AFAGAPVNRAAVEGILKATPAPVQLGGGIRTRAQIDAWLEAGISRVILGTIALR----DP 112
Query: 173 ERLKDLVRVVGKQRLVLDLSCRKKDGKYAIVTDRWQKFSDVYLDERVLDFLASYADEFLV 232
E +K R + R+V+ + KDG A+ + W + SD+ E F +
Sbjct: 113 ELVKTAARAL-PGRIVVGIDA--KDGMVAV--EGWAETSDMKATELAKAFEGCGVAAIVA 167
Query: 233 HGVDVEGKKLGIDDELVALLGKYSPIPVTYAGGVTTMADLEKIKVAGIGRVDVTVGSAL 291
+ +G K G++ A L IPV +GGV + D+ +K +G +G AL
Sbjct: 168 TDIGRDGLKTGVNVPFTAELAHAVSIPVIASGGVRDVNDIRALKASGAPIAGSILGRAL 226
>sp|A1U5H6|HIS4_MARAV 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Marinobacter
aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=hisA
PE=3 SV=1
Length = 245
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 109/247 (44%), Gaps = 26/247 (10%)
Query: 58 PCIDIHKGKVKQIVGSTLQDSK---DDGTKLVTNFESDKSAAEFANLYKEDGLTGGHAIM 114
P ID+ GK ++ ++DS DD + T + + A +L +G G +
Sbjct: 5 PAIDLKDGKCVRLRQGRMEDSTVFGDDPVDMATKWVD--AGARRLHLVDLNGAFAGEPV- 61
Query: 115 LGADPLSKAAAIEALHAYPG-GLQVGGGINSDNSL-SYIEEGATHVIVTSYVFNNGQMDL 172
+ KA A++ YP +Q+GGGI S ++ +Y++ G VI+ + +
Sbjct: 62 --NGEIVKAIAVK----YPNLPIQIGGGIRSAETIEAYLKAGVQWVIIGTKAVKEPEFVT 115
Query: 173 ERLKDLVRVVGKQRLVLDLSCRKKDGKYAIVTDRWQKFSDVYLDERVLDFLASYADEFLV 232
E K+ +++ L KDG+ A TD W + S+V + F +
Sbjct: 116 EMCKEF-----PGHIIVGLDA--KDGRVA--TDGWAEVSEVMAVDLAKRFANDGVSSIVY 166
Query: 233 HGVDVEGKKLGIDDELVALLGKYSPIPVTYAGGVTTMADLEKI-KVAGIGRVDVTVGSAL 291
+ +G G++ E A L + IPV +GGVT M DL+++ VA G + G A
Sbjct: 167 TDIARDGMMQGVNVEATAKLAEEGGIPVIASGGVTNMDDLKRLATVADTGVIGAITGRA- 225
Query: 292 DIFGGNL 298
I+ G L
Sbjct: 226 -IYEGTL 231
>sp|Q9A230|HIS4_CAUCR 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Caulobacter
crescentus (strain ATCC 19089 / CB15) GN=hisA PE=3 SV=1
Length = 241
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 102/224 (45%), Gaps = 24/224 (10%)
Query: 58 PCIDIHKGKVKQIVGSTLQDSKDDGTKLVTNFESDKSAAEFANLYKEDGLTGGHAIMLGA 117
P ID+ G+ ++ L D T T S A+ A + +DG + H + L
Sbjct: 5 PAIDLKDGQCVRL----LHGDMDKATVFNT------SPADQAQRFVQDGFSWLHVVDLNG 54
Query: 118 ----DPLSKAAAIEALHAYPGGLQVGGGINSDNSL-SYIEEGATHVIVTSYVFNNGQMDL 172
++ AA + L + +Q+GGGI + + ++IE G + VI+ + + D
Sbjct: 55 AIEGKSVNTAAVEQILESISIPVQLGGGIRTLEGVEAWIEAGVSRVILGTVAVH----DP 110
Query: 173 ERLKDLVRVVGKQRLVLDLSCRKKDGKYAIVTDRWQKFSDVYLDERVLDFLASYADEFLV 232
E +K R+ +Q + ++ +DGK A+ D W SD+ + F + ++
Sbjct: 111 ELVKKAARLWPEQ---IAVAVDVRDGKVAV--DGWTGLSDLSAIDLSRRFEDAGVAALII 165
Query: 233 HGVDVEGKKLGIDDELVALLGKYSPIPVTYAGGVTTMADLEKIK 276
+ +G G++ E V L IPV +GGV +AD+E++K
Sbjct: 166 TDISRDGALTGVNVEGVGELADAVSIPVIASGGVAAVADIERLK 209
>sp|Q5NMD5|HIS4_ZYMMO 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Zymomonas mobilis
subsp. mobilis (strain ATCC 31821 / ZM4 / CP4) GN=hisA
PE=3 SV=2
Length = 250
Score = 54.7 bits (130), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 103/224 (45%), Gaps = 30/224 (13%)
Query: 58 PCIDIHKGKVKQIVGSTLQDSK---DDGTKLVTNFESDKSAAEFANLYKEDGLTGGHAIM 114
P ID+ +G V ++ + + DD F ++ A + ++ DG GHA+
Sbjct: 9 PAIDLKEGHVVRLSEGDMDRATIYDDDPAARARQFY--EAGARYLHVVDLDGAFAGHAM- 65
Query: 115 LGADPLSKAAAIEAL-HAYPGGLQVGGGINSDNSL-SYIEEGATHVIVTSYVFNNGQMDL 172
AAA++A+ A+PG +++GGGI N++ ++ G + V++ + F N
Sbjct: 66 -------NAAAVDAIVKAFPGTIELGGGIRDMNAIDGWLSRGISRVVIGTAAFEN----- 113
Query: 173 ERLKDLVRVVGKQ---RLVLDLSCRKKDGKYAIVTDRWQKFSDVYLDERVLDFLASYADE 229
DLV+ ++ ++V+ + R DG + T W + S++ + + F +
Sbjct: 114 ---PDLVKEAAQKYPGQIVVAVDAR--DGM--VTTKGWAEQSEISVTDMAERFADAGVVA 166
Query: 230 FLVHGVDVEGKKLGIDDELVALLGKYSPIPVTYAGGVTTMADLE 273
L V +G K G + E L + IPV +GGV + D+E
Sbjct: 167 LLYTDVGRDGLKKGCNSEATLALAAATDIPVIASGGVKDIGDIE 210
>sp|A5INE6|HIS6_THEP1 Imidazole glycerol phosphate synthase subunit HisF OS=Thermotoga
petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995)
GN=hisF PE=3 SV=1
Length = 254
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 95/223 (42%), Gaps = 22/223 (9%)
Query: 52 CAVRFRPCIDIHKGKVKQIVGSTLQDSKDDGTKLVTNFESDKSAAEFANLYKEDGLTGGH 111
A R C+D+ G+V + G+ ++ +D G E Y E G+
Sbjct: 2 LAKRIIACLDVKDGRV--VKGTNFENLRDSG-----------DPVELGKFYSEIGIDELV 48
Query: 112 AIMLGADPLSKAAAIEALHAYPGGLQ----VGGGINSDNSLS-YIEEGATHVIVTSYVFN 166
+ + A + +E + + VGGGI+ + S I GA V + +
Sbjct: 49 FLDITASVEKRKTMLELVEKVAEQIDIPFTVGGGIHDFETASELILRGADKVSINTAAVE 108
Query: 167 NGQMDLERLKDLVRVVGKQRLVLDLSCRKKDGKYAIVTDRWQKFSDVYLDERVLDFLASY 226
+ + + + R G Q +V+ + +K DG++ + T +K + + L + V++
Sbjct: 109 DPSL----ITKIARTFGSQAVVVAIDAKKVDGEFVVFTYSGKKNTGILLRDWVVEVERRG 164
Query: 227 ADEFLVHGVDVEGKKLGIDDELVALLGKYSPIPVTYAGGVTTM 269
A E L+ +D +G K G D E++ + + +P+ +GG M
Sbjct: 165 AGEILLTSIDRDGTKAGYDTEMIRFVRPLTTLPIIASGGAGKM 207
>sp|Q50757|HIS4_METTL 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Methanococcus
thermolithotrophicus GN=hisA PE=3 SV=1
Length = 238
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 109/230 (47%), Gaps = 35/230 (15%)
Query: 58 PCIDIHKGKVKQIVGS-------TLQDSKDDGTKLVTNFESDKSAAEFANLYKEDGLTGG 110
P +D+ GK Q++ L++ + K V+ AE +L DG G
Sbjct: 5 PAVDMKNGKCVQLIQGDPNKKHVELENPVEVAEKWVS------EGAEMLHLVDLDGAIEG 58
Query: 111 HAIMLGADPLSKAAAIEALHAYPGGLQVGGGINSDNSLS-YIEEGATHVIVTSYVFNNGQ 169
++ ++ E + +Q+GGGI+ + S IE GA +I+ + N
Sbjct: 59 ESV-------NRELIKEIIQTVNVPVQIGGGISVRCTESNLIEIGAKRIILGTVAVENPD 111
Query: 170 MDLERLKDLVRVVGKQRLVLDLSCRKKDGKYAIVTDRWQ---KFSDVYLDERVLDFLASY 226
+ ++++ + VGK+++++ L KDGK +V W+ K++ V + ++L+
Sbjct: 112 I----VEEISKKVGKEKVMVALDA--KDGK--VVIKGWKEKTKYTPVEMG-KILE--EKG 160
Query: 227 ADEFLVHGVDVEGKKLGIDDELVALLGKYSPIPVTYAGGVTTMADLEKIK 276
A L V+VEG G++ E V L + IPV +GGVTT+ DL K+K
Sbjct: 161 AGSILFTNVNVEGLLTGMNVEPVETLVEELEIPVIASGGVTTIEDLIKLK 210
>sp|Q5E634|HIS4_VIBF1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Vibrio fischeri
(strain ATCC 700601 / ES114) GN=hisA PE=3 SV=1
Length = 245
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 108/241 (44%), Gaps = 23/241 (9%)
Query: 58 PCIDIHKGKVKQIVGSTLQDSKDDGTKLVTNFESDKSAAEFANLYKEDGLTGGHAIMLGA 117
P +D+ +G+V ++ D G VT ++ D AE NLY + G H + L
Sbjct: 4 PALDLIEGQVVRLF------QGDYGQ--VTEYKVDP--AEQFNLYHQAGANWLHLVDLTG 53
Query: 118 DPLSKAAAIEA----LHAYPGGLQVGGGI-NSDNSLSYIEEGATHVIVTSYVFNNGQMDL 172
+ A ++ L + P +Q+GGG+ N D+ + GA V+V S ++
Sbjct: 54 AKDTTARQLDLIARLLASTPANIQIGGGVRNEDDVQDLLNAGAQRVVVGSTAVKQPEL-- 111
Query: 173 ERLKDLVRVVGKQRLVLDLSCR-KKDGKYAIVTDRWQKFSDVYLDERVLDFLASYADEFL 231
+K + G +++VL L ++G + WQ+ S V ++ + D+L L
Sbjct: 112 --VKGWMEKYGAEKIVLALDINIDENGTRNVAISGWQEDSGVTIEALLEDYLTVGLKHVL 169
Query: 232 VHGVDVEGKKLGIDDEL-VALLGKYSPIPVTYAGGVTTMADLEKIKVAGIGRVDVTVGSA 290
+ +G G + EL V L +Y + +GG+ ++ D+ +K G G V VG A
Sbjct: 170 CTDISRDGTLQGSNVELYVDLCKQYPQVQFQSSGGIGSLDDIAALK--GSGVAGVIVGRA 227
Query: 291 L 291
L
Sbjct: 228 L 228
>sp|A7H5V3|HIS4_CAMJD 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Campylobacter
jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 /
269.97) GN=hisA PE=3 SV=1
Length = 244
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 78/159 (49%), Gaps = 12/159 (7%)
Query: 136 LQVGGGINSDNSL-SYIEEGATHVIVTSYVFNNGQMDLERLKDLVRVVGKQRLVLDLSCR 194
LQVGGGI S + + ++ G V++ S + + LE LK G + +VL L
Sbjct: 78 LQVGGGIRSKEEVKALLDCGVKRVVIGSMAIKDATLCLEILKKF----GSEAIVLALDTI 133
Query: 195 KKDGKYAIVTDRWQKFSDVYLDERVLDFLASYA-DEFLVHGVDVEGKKLGIDDELVALLG 253
K+ Y + + WQ+ SD L E VLDF ++ L + +G G++ L L+
Sbjct: 134 LKED-YVVAVNAWQEASDKKLME-VLDFYSNKGLKHILCTDISKDGTMQGVNVRLYKLIH 191
Query: 254 KYSP-IPVTYAGGVTTMADLEKIKVAGIGRVDVTVGSAL 291
+ P I + +GGV ++ DLE +K G V VG AL
Sbjct: 192 EIFPKICIQASGGVASLKDLENLKGICSG---VIVGKAL 227
>sp|B4RU63|HIS4_ALTMD 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Alteromonas
macleodii (strain DSM 17117 / Deep ecotype) GN=hisA PE=3
SV=1
Length = 245
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 82/177 (46%), Gaps = 12/177 (6%)
Query: 136 LQVGGGINSDNSLS-YIEEGATHVIVTSYVFNNGQMDLERLKDLVRVVGKQRLVLDLSCR 194
Q GGGI S+ ++ +E G + V++ S ++ +K V G +R+VL L
Sbjct: 76 FQAGGGIRSEEEVAQLLETGVSRVVIGSLAVKQPEL----VKSWVEKYGPERIVLALDIN 131
Query: 195 -KKDGKYAIVTDRWQKFSDVYLDERVLDFLASYADEFLVHGVDVEGKKLGIDDELV-ALL 252
+ G+ I T WQ+ S V L+ + DF A L + +G G + EL +
Sbjct: 132 INESGEKLIATHGWQENSGVALEGLLEDFATVGAKHVLCTDISRDGTLQGANTELYQEMA 191
Query: 253 GKYSPIPVTYAGGVTTMADLEKIKVAGIGRVDVTVGSALDIFGGNLAYKDVVA-WHA 308
++ + +GG+ ++ D+E +K +G V +G AL G K+ +A W +
Sbjct: 192 ARFPNVSWQASGGIGSINDIEALKPTNVG--GVILGRAL--LEGKFTVKEAIACWQS 244
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.135 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 120,018,737
Number of Sequences: 539616
Number of extensions: 5359866
Number of successful extensions: 17052
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 235
Number of HSP's successfully gapped in prelim test: 756
Number of HSP's that attempted gapping in prelim test: 15899
Number of HSP's gapped (non-prelim): 1530
length of query: 316
length of database: 191,569,459
effective HSP length: 117
effective length of query: 199
effective length of database: 128,434,387
effective search space: 25558443013
effective search space used: 25558443013
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)