Query 021158
Match_columns 316
No_of_seqs 290 out of 1136
Neff 12.0
Searched_HMMs 46136
Date Fri Mar 29 08:03:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021158.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021158hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4178 Soluble epoxide hydrol 100.0 3.8E-47 8.2E-52 284.4 21.9 300 1-316 19-320 (322)
2 PLN02824 hydrolase, alpha/beta 100.0 1.1E-39 2.3E-44 257.9 21.0 280 3-316 7-294 (294)
3 PRK03592 haloalkane dehalogena 100.0 1.3E-38 2.8E-43 251.9 20.4 275 3-316 6-289 (295)
4 PLN02679 hydrolase, alpha/beta 100.0 7.1E-38 1.5E-42 252.5 22.0 281 7-315 64-356 (360)
5 PRK00870 haloalkane dehalogena 100.0 7.7E-38 1.7E-42 248.0 21.4 267 4-316 19-301 (302)
6 TIGR02240 PHA_depoly_arom poly 100.0 6.6E-37 1.4E-41 239.7 18.9 258 6-315 4-265 (276)
7 PRK03204 haloalkane dehalogena 100.0 5.7E-37 1.2E-41 240.2 16.3 267 4-313 14-285 (286)
8 TIGR03343 biphenyl_bphD 2-hydr 100.0 2.2E-35 4.8E-40 232.5 19.8 269 4-315 5-282 (282)
9 PLN03087 BODYGUARD 1 domain co 100.0 2E-35 4.4E-40 240.9 18.3 282 4-315 176-478 (481)
10 PLN02578 hydrolase 100.0 7.1E-35 1.5E-39 235.0 20.9 278 7-314 69-353 (354)
11 PLN02965 Probable pheophorbida 100.0 3.9E-35 8.5E-40 226.9 15.4 245 26-315 5-252 (255)
12 TIGR03056 bchO_mg_che_rel puta 100.0 1.7E-34 3.6E-39 227.3 18.6 266 6-314 8-278 (278)
13 PRK10349 carboxylesterase BioH 100.0 7.8E-35 1.7E-39 225.8 15.9 246 15-315 3-255 (256)
14 PRK06489 hypothetical protein; 100.0 2.5E-34 5.4E-39 232.5 18.0 119 10-128 46-189 (360)
15 PLN02385 hydrolase; alpha/beta 100.0 5.5E-34 1.2E-38 229.9 18.7 261 7-316 65-345 (349)
16 PLN03084 alpha/beta hydrolase 100.0 1.5E-33 3.3E-38 225.9 20.1 265 7-315 108-383 (383)
17 TIGR03611 RutD pyrimidine util 100.0 1.6E-33 3.6E-38 219.1 15.6 253 16-315 1-257 (257)
18 PRK10673 acyl-CoA esterase; Pr 100.0 1.8E-33 4E-38 218.4 15.4 236 23-316 15-255 (255)
19 PRK11126 2-succinyl-6-hydroxy- 100.0 3.7E-33 8E-38 214.9 15.4 100 24-128 2-102 (242)
20 PRK10749 lysophospholipase L2; 100.0 1.9E-32 4.1E-37 218.9 19.6 125 5-129 32-167 (330)
21 TIGR02427 protocat_pcaD 3-oxoa 100.0 1.5E-32 3.2E-37 212.9 18.4 247 15-314 1-251 (251)
22 PRK07581 hypothetical protein; 100.0 3.8E-33 8.3E-38 224.6 14.8 282 10-316 22-336 (339)
23 PRK08775 homoserine O-acetyltr 100.0 5.1E-33 1.1E-37 223.6 15.3 273 8-316 40-339 (343)
24 PHA02857 monoglyceride lipase; 100.0 1.6E-32 3.6E-37 215.2 17.2 253 7-316 4-273 (276)
25 PLN02211 methyl indole-3-aceta 100.0 1.1E-32 2.3E-37 214.0 15.8 260 10-315 3-269 (273)
26 KOG4409 Predicted hydrolase/ac 100.0 1.4E-31 3E-36 201.5 18.1 127 6-133 67-200 (365)
27 KOG1454 Predicted hydrolase/ac 100.0 2.8E-32 6E-37 213.9 14.7 255 23-316 57-324 (326)
28 PLN02298 hydrolase, alpha/beta 100.0 5.7E-32 1.2E-36 217.1 16.5 122 7-129 36-170 (330)
29 TIGR01392 homoserO_Ac_trn homo 100.0 1.4E-32 3E-37 221.8 12.8 121 10-130 12-164 (351)
30 TIGR03695 menH_SHCHC 2-succiny 100.0 8.4E-32 1.8E-36 208.6 15.9 250 24-314 1-251 (251)
31 TIGR01738 bioH putative pimelo 100.0 6.9E-32 1.5E-36 208.4 14.6 238 22-313 1-245 (245)
32 PRK00175 metX homoserine O-ace 100.0 9.4E-32 2E-36 218.3 13.1 121 10-130 29-184 (379)
33 PF12697 Abhydrolase_6: Alpha/ 100.0 1.4E-32 3E-37 209.9 7.4 224 27-308 1-228 (228)
34 TIGR01250 pro_imino_pep_2 prol 100.0 7.5E-31 1.6E-35 207.6 16.4 122 7-128 5-131 (288)
35 PRK14875 acetoin dehydrogenase 100.0 1.7E-30 3.6E-35 212.7 18.4 251 7-316 112-371 (371)
36 PLN02894 hydrolase, alpha/beta 100.0 1.4E-29 3E-34 206.4 21.7 115 15-130 93-213 (402)
37 COG2267 PldB Lysophospholipase 100.0 7.1E-30 1.5E-34 198.6 18.8 271 4-316 10-294 (298)
38 KOG2984 Predicted hydrolase [G 100.0 3.4E-30 7.5E-35 177.9 13.5 248 4-315 21-275 (277)
39 TIGR01249 pro_imino_pep_1 prol 100.0 9.4E-29 2E-33 196.0 20.5 124 5-129 5-131 (306)
40 PRK05855 short chain dehydroge 100.0 7.8E-29 1.7E-33 214.7 20.9 121 4-125 3-128 (582)
41 PLN02980 2-oxoglutarate decarb 100.0 3.7E-29 8.1E-34 232.7 18.7 124 4-128 1344-1480(1655)
42 COG1647 Esterase/lipase [Gener 100.0 2E-29 4.3E-34 177.2 11.1 225 24-315 15-243 (243)
43 PLN02652 hydrolase; alpha/beta 100.0 7.7E-29 1.7E-33 200.2 16.0 250 12-315 119-386 (395)
44 KOG1455 Lysophospholipase [Lip 100.0 1.2E-28 2.5E-33 182.4 15.5 264 7-316 31-312 (313)
45 PLN02511 hydrolase 100.0 1.6E-29 3.6E-34 205.1 10.4 258 12-315 80-364 (388)
46 KOG2382 Predicted alpha/beta h 100.0 7.9E-28 1.7E-32 181.0 14.8 253 23-316 51-313 (315)
47 PRK06765 homoserine O-acetyltr 100.0 4.1E-27 8.8E-32 189.4 16.9 282 12-315 39-387 (389)
48 TIGR01607 PST-A Plasmodium sub 99.9 7E-27 1.5E-31 186.2 13.9 121 9-129 3-186 (332)
49 PRK05077 frsA fermentation/res 99.9 1.4E-25 3E-30 182.9 18.1 227 12-316 177-412 (414)
50 PRK10985 putative hydrolase; P 99.9 7.7E-26 1.7E-30 180.4 14.7 261 11-315 39-319 (324)
51 PLN02872 triacylglycerol lipas 99.9 1.5E-24 3.2E-29 174.6 17.9 296 7-316 48-389 (395)
52 TIGR03100 hydr1_PEP hydrolase, 99.9 6.8E-24 1.5E-28 165.0 18.5 116 9-129 7-135 (274)
53 PRK13604 luxD acyl transferase 99.9 3.1E-24 6.8E-29 163.7 15.2 119 7-129 13-142 (307)
54 TIGR01838 PHA_synth_I poly(R)- 99.9 2.9E-24 6.3E-29 177.5 12.6 257 24-303 188-462 (532)
55 PRK10566 esterase; Provisional 99.9 1.7E-23 3.8E-28 161.6 15.2 102 16-117 15-131 (249)
56 TIGR01836 PHA_synth_III_C poly 99.9 5.6E-24 1.2E-28 171.7 12.6 121 10-130 44-173 (350)
57 PRK11071 esterase YqiA; Provis 99.9 2.4E-23 5.2E-28 152.1 11.9 184 25-314 2-189 (190)
58 PF00561 Abhydrolase_1: alpha/ 99.9 1.2E-24 2.6E-29 166.4 2.4 76 52-127 1-78 (230)
59 KOG2564 Predicted acetyltransf 99.9 7.4E-23 1.6E-27 149.1 10.0 117 8-126 52-180 (343)
60 PF12695 Abhydrolase_5: Alpha/ 99.9 1.4E-22 3E-27 143.3 7.9 93 26-126 1-93 (145)
61 COG0596 MhpC Predicted hydrola 99.9 4.4E-20 9.6E-25 144.5 20.6 115 10-129 6-124 (282)
62 PRK07868 acyl-CoA synthetase; 99.9 3.6E-21 7.9E-26 174.2 15.9 275 23-316 66-361 (994)
63 KOG4667 Predicted esterase [Li 99.9 3.4E-20 7.5E-25 130.0 14.4 211 20-301 29-244 (269)
64 PRK11460 putative hydrolase; P 99.8 2.1E-20 4.6E-25 141.4 12.6 177 24-314 16-210 (232)
65 KOG1552 Predicted alpha/beta h 99.8 9E-20 2E-24 132.8 12.8 188 24-314 60-250 (258)
66 TIGR03101 hydr2_PEP hydrolase, 99.8 5.8E-20 1.3E-24 139.9 11.8 104 24-129 25-135 (266)
67 COG2021 MET2 Homoserine acetyl 99.8 1.7E-19 3.8E-24 138.3 13.5 282 11-315 33-367 (368)
68 PF06342 DUF1057: Alpha/beta h 99.8 3.3E-19 7.1E-24 131.6 14.4 109 26-137 37-146 (297)
69 COG0429 Predicted hydrolase of 99.8 4E-20 8.6E-25 139.3 9.6 244 24-315 75-339 (345)
70 COG3208 GrsT Predicted thioest 99.8 1.2E-19 2.6E-24 131.3 11.0 223 24-314 7-234 (244)
71 PF00326 Peptidase_S9: Prolyl 99.8 1.1E-19 2.4E-24 136.7 11.0 195 40-316 3-209 (213)
72 COG1506 DAP2 Dipeptidyl aminop 99.8 2E-19 4.3E-24 154.6 13.2 223 12-316 374-616 (620)
73 KOG4391 Predicted alpha/beta h 99.8 3.4E-20 7.3E-25 130.2 6.1 209 11-315 62-281 (300)
74 PLN02442 S-formylglutathione h 99.8 1.1E-18 2.4E-23 136.1 15.2 106 24-129 47-179 (283)
75 PLN00021 chlorophyllase 99.8 8.9E-19 1.9E-23 137.2 13.8 104 23-128 51-166 (313)
76 PF03096 Ndr: Ndr family; Int 99.8 1.8E-18 3.9E-23 129.6 14.6 263 8-315 3-278 (283)
77 KOG1838 Alpha/beta hydrolase [ 99.8 3.1E-18 6.7E-23 134.1 16.1 266 5-314 94-386 (409)
78 KOG2931 Differentiation-relate 99.8 1.2E-17 2.6E-22 123.2 16.9 268 5-315 23-305 (326)
79 TIGR02821 fghA_ester_D S-formy 99.8 9E-18 1.9E-22 130.9 17.1 106 24-129 42-174 (275)
80 TIGR01839 PHA_synth_II poly(R) 99.8 8.3E-19 1.8E-23 143.7 9.2 103 24-131 215-331 (560)
81 KOG2565 Predicted hydrolases o 99.8 6.4E-18 1.4E-22 128.4 12.6 293 4-315 124-462 (469)
82 PF02230 Abhydrolase_2: Phosph 99.7 1.2E-17 2.7E-22 125.5 10.8 179 24-315 14-214 (216)
83 PF01738 DLH: Dienelactone hyd 99.7 1.1E-17 2.4E-22 126.2 9.7 182 23-316 13-217 (218)
84 COG2945 Predicted hydrolase of 99.7 1.4E-16 3.1E-21 110.3 13.1 171 24-314 28-205 (210)
85 PF06500 DUF1100: Alpha/beta h 99.7 1.1E-16 2.3E-21 126.5 12.6 123 5-129 166-297 (411)
86 PRK10162 acetyl esterase; Prov 99.7 1.7E-15 3.8E-20 120.3 19.7 104 24-129 81-196 (318)
87 TIGR01840 esterase_phb esteras 99.7 9.2E-17 2E-21 120.5 11.2 107 23-129 12-131 (212)
88 PF05448 AXE1: Acetyl xylan es 99.7 4.7E-16 1E-20 122.1 14.3 103 24-128 83-209 (320)
89 TIGR01849 PHB_depoly_PhaZ poly 99.7 2.5E-16 5.4E-21 125.7 12.2 104 25-132 103-212 (406)
90 TIGR03230 lipo_lipase lipoprot 99.7 1.7E-16 3.8E-21 128.0 9.7 105 23-129 40-155 (442)
91 COG0400 Predicted esterase [Ge 99.7 1.1E-15 2.3E-20 111.3 12.5 174 24-311 18-204 (207)
92 cd00707 Pancreat_lipase_like P 99.7 2.2E-16 4.7E-21 122.3 6.6 115 13-129 24-148 (275)
93 COG0412 Dienelactone hydrolase 99.6 1.3E-14 2.8E-19 109.4 15.0 178 25-315 28-232 (236)
94 COG3243 PhaC Poly(3-hydroxyalk 99.6 1.6E-15 3.5E-20 118.2 9.0 256 24-299 107-373 (445)
95 PF06821 Ser_hydrolase: Serine 99.6 2.4E-15 5.2E-20 107.2 8.6 89 27-129 1-92 (171)
96 PF00975 Thioesterase: Thioest 99.6 1.5E-14 3.2E-19 110.4 13.4 101 25-129 1-105 (229)
97 TIGR03502 lipase_Pla1_cef extr 99.6 4.2E-15 9.1E-20 127.5 11.3 111 4-114 418-576 (792)
98 PF12146 Hydrolase_4: Putative 99.6 2.7E-15 5.8E-20 91.9 7.3 75 13-88 1-79 (79)
99 COG3458 Acetyl esterase (deace 99.6 1.7E-14 3.8E-19 105.5 11.4 119 9-129 62-211 (321)
100 COG3571 Predicted hydrolase of 99.6 4.4E-14 9.6E-19 94.8 10.9 106 26-131 16-127 (213)
101 PF08538 DUF1749: Protein of u 99.6 1.3E-14 2.8E-19 110.2 9.4 99 24-131 33-151 (303)
102 PF02273 Acyl_transf_2: Acyl t 99.6 6.9E-14 1.5E-18 100.9 11.1 117 8-128 6-134 (294)
103 PRK10115 protease 2; Provision 99.6 1.9E-13 4.1E-18 118.8 15.7 121 10-130 423-561 (686)
104 KOG2624 Triglyceride lipase-ch 99.5 1.3E-13 2.9E-18 110.0 12.8 298 6-315 51-397 (403)
105 PF12740 Chlorophyllase2: Chlo 99.5 7.7E-14 1.7E-18 104.0 10.6 105 22-128 15-131 (259)
106 TIGR00976 /NonD putative hydro 99.5 1.8E-14 3.9E-19 123.1 7.9 116 11-129 4-133 (550)
107 KOG3043 Predicted hydrolase re 99.5 2E-13 4.3E-18 97.3 11.6 194 8-316 22-240 (242)
108 PF05728 UPF0227: Uncharacteri 99.5 5.9E-13 1.3E-17 95.9 12.9 88 27-130 2-93 (187)
109 COG4757 Predicted alpha/beta h 99.5 6.6E-13 1.4E-17 95.0 9.5 104 11-115 13-126 (281)
110 PF07859 Abhydrolase_3: alpha/ 99.4 4.7E-13 1E-17 100.7 8.3 98 27-129 1-111 (211)
111 PTZ00472 serine carboxypeptida 99.4 3.7E-12 7.9E-17 105.6 13.5 123 7-130 50-218 (462)
112 PF07224 Chlorophyllase: Chlor 99.4 3.1E-12 6.7E-17 93.6 11.3 105 23-130 45-159 (307)
113 PF09752 DUF2048: Uncharacteri 99.4 9.5E-12 2.1E-16 96.2 14.5 239 24-314 92-347 (348)
114 PRK05371 x-prolyl-dipeptidyl a 99.4 2.1E-12 4.6E-17 113.1 11.5 84 42-128 270-373 (767)
115 COG4188 Predicted dienelactone 99.4 2.8E-12 6E-17 99.4 10.5 93 24-116 71-182 (365)
116 PF10230 DUF2305: Uncharacteri 99.4 1.2E-12 2.7E-17 100.7 8.3 106 24-129 2-123 (266)
117 COG3545 Predicted esterase of 99.4 4.3E-12 9.3E-17 87.3 9.8 92 25-130 3-96 (181)
118 PF02129 Peptidase_S15: X-Pro 99.4 2.6E-12 5.7E-17 100.2 9.8 116 12-130 1-138 (272)
119 PF06057 VirJ: Bacterial virul 99.4 4.2E-12 9.2E-17 89.5 9.5 98 25-129 3-108 (192)
120 PRK10252 entF enterobactin syn 99.4 1.3E-11 2.9E-16 117.0 15.5 102 21-127 1065-1170(1296)
121 KOG2100 Dipeptidyl aminopeptid 99.4 6.1E-12 1.3E-16 109.9 12.2 226 3-315 497-746 (755)
122 KOG2551 Phospholipase/carboxyh 99.4 1.3E-11 2.8E-16 88.2 10.4 58 247-314 161-218 (230)
123 PF03403 PAF-AH_p_II: Platelet 99.4 1.1E-12 2.5E-17 105.7 5.8 105 24-129 100-263 (379)
124 PF06028 DUF915: Alpha/beta hy 99.3 4.5E-12 9.8E-17 95.8 8.3 107 24-130 11-145 (255)
125 PF08840 BAAT_C: BAAT / Acyl-C 99.3 8.9E-13 1.9E-17 98.2 3.9 51 79-130 5-58 (213)
126 KOG1515 Arylacetamide deacetyl 99.3 3.8E-11 8.3E-16 94.2 12.6 104 24-132 90-211 (336)
127 PF03959 FSH1: Serine hydrolas 99.3 3.3E-12 7.1E-17 95.4 5.9 105 23-128 3-145 (212)
128 PF07819 PGAP1: PGAP1-like pro 99.3 1.2E-11 2.5E-16 92.7 8.8 107 23-130 3-125 (225)
129 KOG4627 Kynurenine formamidase 99.3 3.8E-11 8.2E-16 84.5 10.3 111 15-129 55-173 (270)
130 PLN02733 phosphatidylcholine-s 99.3 2.4E-11 5.2E-16 99.3 10.0 124 6-130 70-203 (440)
131 COG3319 Thioesterase domains o 99.3 3.2E-10 7E-15 85.5 13.6 100 25-129 1-104 (257)
132 COG0657 Aes Esterase/lipase [L 99.2 6.2E-10 1.3E-14 88.9 15.6 102 24-130 79-193 (312)
133 PRK04940 hypothetical protein; 99.2 3.4E-10 7.4E-15 79.9 11.5 86 27-130 2-94 (180)
134 smart00824 PKS_TE Thioesterase 99.2 2.1E-09 4.6E-14 80.9 14.3 95 29-128 2-102 (212)
135 KOG2112 Lysophospholipase [Lip 99.1 8.6E-10 1.9E-14 78.5 10.8 102 25-126 4-126 (206)
136 PF10503 Esterase_phd: Esteras 99.1 1.4E-09 3.1E-14 80.4 12.4 106 24-129 16-133 (220)
137 KOG2281 Dipeptidyl aminopeptid 99.1 9E-10 1.9E-14 90.6 11.1 105 24-128 642-762 (867)
138 KOG3975 Uncharacterized conser 99.1 8.1E-10 1.8E-14 80.3 9.4 124 5-128 2-147 (301)
139 PF01674 Lipase_2: Lipase (cla 99.1 7.3E-11 1.6E-15 87.0 3.9 89 25-114 2-96 (219)
140 KOG3847 Phospholipase A2 (plat 99.0 6.9E-10 1.5E-14 83.5 6.7 105 25-130 119-277 (399)
141 PF03583 LIP: Secretory lipase 99.0 1.2E-09 2.5E-14 85.5 8.0 87 43-129 18-114 (290)
142 PF11339 DUF3141: Protein of u 99.0 8.4E-09 1.8E-13 83.4 12.1 209 46-271 96-319 (581)
143 COG4099 Predicted peptidase [G 98.9 8.6E-09 1.9E-13 77.2 9.1 113 13-128 171-304 (387)
144 PF05677 DUF818: Chlamydia CHL 98.9 2.8E-08 6.2E-13 76.4 11.6 108 3-115 111-237 (365)
145 PF12715 Abhydrolase_7: Abhydr 98.9 4.6E-09 9.9E-14 82.5 7.0 102 24-126 115-258 (390)
146 PF00151 Lipase: Lipase; Inte 98.9 7.5E-10 1.6E-14 87.6 2.7 105 24-130 71-189 (331)
147 PF00450 Peptidase_S10: Serine 98.9 1.4E-08 3.1E-13 84.8 9.9 122 8-130 15-183 (415)
148 KOG4840 Predicted hydrolases o 98.8 4.1E-07 8.9E-12 65.4 12.9 102 24-130 36-146 (299)
149 COG4814 Uncharacterized protei 98.8 3.8E-07 8.3E-12 67.0 12.8 104 26-129 47-177 (288)
150 KOG3253 Predicted alpha/beta h 98.7 1.2E-08 2.7E-13 83.5 5.0 97 24-129 176-287 (784)
151 PF12048 DUF3530: Protein of u 98.7 9.2E-07 2E-11 69.9 15.3 123 7-129 65-230 (310)
152 COG3509 LpqC Poly(3-hydroxybut 98.7 1.7E-07 3.6E-12 70.7 10.4 122 7-128 38-179 (312)
153 COG1075 LipA Predicted acetylt 98.7 2E-08 4.3E-13 80.3 4.9 102 25-130 60-166 (336)
154 PF05990 DUF900: Alpha/beta hy 98.7 1.7E-07 3.6E-12 70.9 9.1 103 23-127 17-136 (233)
155 COG2936 Predicted acyl esteras 98.7 3.3E-07 7.2E-12 76.2 10.7 117 12-129 28-160 (563)
156 KOG1551 Uncharacterized conser 98.6 3.7E-07 7.9E-12 67.5 9.7 56 252-315 309-365 (371)
157 PF05057 DUF676: Putative seri 98.6 9.3E-08 2E-12 71.7 6.4 88 25-112 5-97 (217)
158 KOG1553 Predicted alpha/beta h 98.6 1.4E-07 3.1E-12 72.3 6.9 118 6-128 217-345 (517)
159 PF05705 DUF829: Eukaryotic pr 98.6 3.5E-07 7.5E-12 70.2 9.2 64 247-313 176-240 (240)
160 PF04301 DUF452: Protein of un 98.6 1.3E-07 2.9E-12 69.1 5.5 81 24-130 11-92 (213)
161 PLN02606 palmitoyl-protein thi 98.5 1.9E-06 4.1E-11 66.2 11.4 101 24-129 26-133 (306)
162 PLN02209 serine carboxypeptida 98.5 9.3E-06 2E-10 67.2 15.8 65 249-315 351-434 (437)
163 PLN03016 sinapoylglucose-malat 98.5 5.1E-06 1.1E-10 68.7 12.8 65 249-315 347-430 (433)
164 PF05577 Peptidase_S28: Serine 98.5 1.3E-06 2.7E-11 73.3 9.5 116 15-130 15-150 (434)
165 PF00756 Esterase: Putative es 98.4 3.7E-07 8E-12 70.7 4.7 106 25-130 25-152 (251)
166 PF02450 LCAT: Lecithin:choles 98.4 1.5E-06 3.2E-11 71.3 7.8 110 11-130 37-162 (389)
167 cd00312 Esterase_lipase Estera 98.4 3E-06 6.4E-11 72.5 9.8 105 24-130 95-215 (493)
168 PRK10439 enterobactin/ferric e 98.3 2.7E-06 5.9E-11 70.0 8.4 104 24-128 209-323 (411)
169 COG2272 PnbA Carboxylesterase 98.3 4.5E-05 9.8E-10 62.3 14.8 106 24-129 94-218 (491)
170 COG3150 Predicted esterase [Ge 98.3 3.2E-06 6.9E-11 58.1 6.9 90 27-130 2-93 (191)
171 KOG1282 Serine carboxypeptidas 98.3 3E-05 6.4E-10 63.8 13.6 123 7-130 47-215 (454)
172 KOG3101 Esterase D [General fu 98.3 2.6E-06 5.6E-11 60.9 6.5 108 24-131 44-179 (283)
173 PF10142 PhoPQ_related: PhoPQ- 98.3 7.6E-06 1.6E-10 65.4 9.9 59 247-314 260-318 (367)
174 KOG3724 Negative regulator of 98.2 1.2E-05 2.5E-10 68.9 9.5 101 24-129 89-221 (973)
175 COG3946 VirJ Type IV secretory 98.2 0.00011 2.4E-09 58.3 13.5 93 26-125 262-362 (456)
176 COG4782 Uncharacterized protei 98.1 1.3E-05 2.8E-10 62.6 7.7 105 24-128 116-234 (377)
177 PF08386 Abhydrolase_4: TAP-li 98.1 2.8E-06 6.1E-11 55.3 3.4 59 249-314 34-92 (103)
178 COG1770 PtrB Protease II [Amin 98.1 4.7E-05 1E-09 64.2 11.0 120 11-130 427-564 (682)
179 PLN02213 sinapoylglucose-malat 98.0 0.0001 2.3E-09 58.9 10.9 65 249-315 233-316 (319)
180 COG1073 Hydrolases of the alph 98.0 0.00018 3.9E-09 57.2 12.4 63 247-315 229-296 (299)
181 PF10340 DUF2424: Protein of u 98.0 3.6E-05 7.8E-10 61.4 7.7 105 24-131 122-238 (374)
182 KOG2183 Prolylcarboxypeptidase 98.0 6.4E-05 1.4E-09 59.8 8.7 104 25-128 81-202 (492)
183 PLN02633 palmitoyl protein thi 98.0 3E-05 6.4E-10 59.8 6.6 102 23-129 24-132 (314)
184 PF02089 Palm_thioest: Palmito 98.0 2.6E-06 5.6E-11 64.9 0.9 104 25-129 6-117 (279)
185 KOG2541 Palmitoyl protein thio 97.9 2.6E-05 5.5E-10 58.2 5.9 98 25-129 24-129 (296)
186 KOG2369 Lecithin:cholesterol a 97.9 2.5E-05 5.5E-10 63.2 6.3 89 38-129 124-226 (473)
187 KOG2237 Predicted serine prote 97.9 0.00042 9E-09 58.4 13.2 108 23-130 469-586 (712)
188 COG1505 Serine proteases of th 97.9 3.6E-05 7.8E-10 64.1 6.6 122 5-127 395-534 (648)
189 PLN02517 phosphatidylcholine-s 97.9 5.1E-05 1.1E-09 63.7 7.3 84 39-129 157-264 (642)
190 COG0627 Predicted esterase [Ge 97.9 6.9E-05 1.5E-09 59.1 7.3 108 25-132 55-191 (316)
191 PF00135 COesterase: Carboxyle 97.8 5E-05 1.1E-09 65.9 6.4 105 25-129 126-246 (535)
192 COG2939 Carboxypeptidase C (ca 97.8 0.0046 1E-07 51.2 16.4 107 24-131 101-239 (498)
193 KOG2182 Hydrolytic enzymes of 97.7 0.00017 3.6E-09 59.0 7.8 108 23-130 85-209 (514)
194 PF11144 DUF2920: Protein of u 97.7 0.00024 5.2E-09 57.1 8.2 35 94-128 185-219 (403)
195 COG4553 DepA Poly-beta-hydroxy 97.7 0.00068 1.5E-08 51.5 9.8 103 24-130 103-211 (415)
196 cd00741 Lipase Lipase. Lipase 97.5 0.00016 3.5E-09 51.2 4.5 53 77-129 8-68 (153)
197 PF07082 DUF1350: Protein of u 97.5 0.00099 2.2E-08 49.9 8.0 93 26-125 19-122 (250)
198 PF01764 Lipase_3: Lipase (cla 97.4 0.00055 1.2E-08 47.7 5.7 39 77-115 48-86 (140)
199 PF06441 EHN: Epoxide hydrolas 97.3 0.00057 1.2E-08 44.9 5.1 42 2-43 66-111 (112)
200 COG2382 Fes Enterochelin ester 97.3 0.00091 2E-08 51.4 6.8 105 24-129 98-213 (299)
201 COG4287 PqaA PhoPQ-activated p 97.3 0.0035 7.6E-08 49.5 9.8 48 247-300 327-374 (507)
202 KOG3967 Uncharacterized conser 97.3 0.00091 2E-08 48.3 6.0 104 24-127 101-226 (297)
203 PF11187 DUF2974: Protein of u 97.1 0.0081 1.8E-07 45.2 9.4 52 78-130 70-125 (224)
204 PF06259 Abhydrolase_8: Alpha/ 97.0 0.0049 1.1E-07 44.3 7.2 56 75-130 86-146 (177)
205 KOG1516 Carboxylesterase and r 97.0 0.0057 1.2E-07 53.3 9.1 107 24-130 112-234 (545)
206 PF01083 Cutinase: Cutinase; 97.0 0.003 6.6E-08 45.8 6.2 75 52-130 40-124 (179)
207 COG2830 Uncharacterized protei 96.9 0.0082 1.8E-07 41.4 7.3 80 26-130 13-92 (214)
208 COG2819 Predicted hydrolase of 96.9 0.0013 2.8E-08 49.9 3.7 52 80-131 121-175 (264)
209 PF11288 DUF3089: Protein of u 96.8 0.0038 8.2E-08 45.8 5.3 70 44-114 39-116 (207)
210 cd00519 Lipase_3 Lipase (class 96.7 0.0026 5.7E-08 48.5 4.2 25 91-115 126-150 (229)
211 COG4947 Uncharacterized protei 96.6 0.0057 1.2E-07 42.7 5.0 114 13-131 14-139 (227)
212 KOG2521 Uncharacterized conser 96.5 0.024 5.2E-07 45.4 8.8 65 249-316 225-290 (350)
213 PLN02454 triacylglycerol lipas 96.4 0.0068 1.5E-07 49.5 5.1 36 79-114 212-249 (414)
214 PLN02571 triacylglycerol lipas 96.4 0.0062 1.3E-07 49.7 4.8 37 77-113 208-246 (413)
215 PLN00413 triacylglycerol lipas 96.2 0.0096 2.1E-07 49.3 5.2 37 76-112 267-303 (479)
216 PLN02162 triacylglycerol lipas 96.2 0.01 2.2E-07 49.0 5.0 37 76-112 261-297 (475)
217 PLN02408 phospholipase A1 96.2 0.0097 2.1E-07 47.9 4.8 38 78-115 183-222 (365)
218 PF05576 Peptidase_S37: PS-10 96.1 0.0044 9.5E-08 49.9 2.7 104 24-129 63-170 (448)
219 KOG4372 Predicted alpha/beta h 96.0 0.0075 1.6E-07 48.5 3.3 86 25-111 81-168 (405)
220 PLN02934 triacylglycerol lipas 95.8 0.016 3.5E-07 48.4 4.8 38 76-113 304-341 (515)
221 PF04083 Abhydro_lipase: Parti 95.7 0.028 6.2E-07 32.6 4.2 35 7-41 16-60 (63)
222 PLN02324 triacylglycerol lipas 95.7 0.019 4.2E-07 46.9 4.7 36 78-113 198-235 (415)
223 PLN02310 triacylglycerol lipas 95.6 0.023 4.9E-07 46.4 4.6 37 77-113 189-229 (405)
224 PF05277 DUF726: Protein of un 95.5 0.022 4.8E-07 45.7 4.3 40 91-130 218-262 (345)
225 PLN02802 triacylglycerol lipas 95.4 0.027 5.8E-07 47.2 4.7 37 78-114 313-351 (509)
226 PLN02753 triacylglycerol lipas 95.4 0.03 6.5E-07 47.0 4.7 37 77-113 291-332 (531)
227 PLN03037 lipase class 3 family 95.2 0.034 7.4E-07 46.7 4.6 37 77-113 298-338 (525)
228 PLN02719 triacylglycerol lipas 95.2 0.037 8E-07 46.4 4.7 38 77-114 277-319 (518)
229 PLN02761 lipase class 3 family 95.1 0.039 8.4E-07 46.4 4.6 37 77-113 272-314 (527)
230 PF06850 PHB_depo_C: PHB de-po 94.7 0.03 6.5E-07 40.4 2.7 65 249-316 134-202 (202)
231 PF08237 PE-PPE: PE-PPE domain 94.4 0.22 4.8E-06 37.7 6.9 80 51-130 2-91 (225)
232 KOG4569 Predicted lipase [Lipi 94.4 0.076 1.6E-06 43.0 4.7 37 77-113 155-191 (336)
233 KOG1202 Animal-type fatty acid 94.1 0.19 4.2E-06 46.7 6.9 95 23-128 2122-2219(2376)
234 PLN02847 triacylglycerol lipas 94.1 0.1 2.2E-06 44.7 4.9 23 91-113 249-271 (633)
235 PF07519 Tannase: Tannase and 93.7 0.44 9.6E-06 40.7 8.0 67 247-315 351-426 (474)
236 KOG1283 Serine carboxypeptidas 92.5 0.88 1.9E-05 35.9 7.3 89 24-114 31-143 (414)
237 TIGR03712 acc_sec_asp2 accesso 90.1 11 0.00024 32.1 12.2 101 9-115 271-379 (511)
238 COG5153 CVT17 Putative lipase 89.4 0.6 1.3E-05 36.1 3.9 25 91-115 274-298 (425)
239 KOG4540 Putative lipase essent 89.4 0.6 1.3E-05 36.1 3.9 25 91-115 274-298 (425)
240 PF06792 UPF0261: Uncharacteri 89.2 4.1 9E-05 33.7 8.7 99 25-123 2-125 (403)
241 PF09949 DUF2183: Uncharacteri 89.2 1.1 2.4E-05 28.9 4.4 83 39-122 12-96 (100)
242 PF07519 Tannase: Tannase and 88.3 0.44 9.5E-06 40.7 2.9 113 15-129 16-151 (474)
243 KOG2029 Uncharacterized conser 87.9 1.2 2.6E-05 38.4 5.0 33 80-112 510-545 (697)
244 PF05576 Peptidase_S37: PS-10 87.3 1.8 3.9E-05 35.7 5.5 58 247-313 349-411 (448)
245 PRK02399 hypothetical protein; 86.9 8.8 0.00019 31.9 9.1 98 25-122 4-126 (406)
246 KOG4388 Hormone-sensitive lipa 86.1 1.2 2.6E-05 38.3 4.1 82 26-112 398-488 (880)
247 cd01714 ETF_beta The electron 85.9 2.9 6.2E-05 31.2 5.7 58 47-114 72-134 (202)
248 COG0529 CysC Adenylylsulfate k 85.5 1.9 4.1E-05 31.0 4.2 38 22-59 20-59 (197)
249 KOG2385 Uncharacterized conser 85.1 1.7 3.7E-05 36.7 4.5 43 89-131 443-490 (633)
250 PRK10279 hypothetical protein; 84.8 2.4 5.1E-05 33.9 5.1 39 83-121 23-61 (300)
251 KOG4389 Acetylcholinesterase/B 82.7 4.6 9.9E-05 34.2 5.9 105 25-131 136-258 (601)
252 PF03283 PAE: Pectinacetyleste 81.2 3 6.4E-05 34.4 4.5 22 92-113 155-176 (361)
253 cd07230 Pat_TGL4-5_like Triacy 80.8 3.9 8.5E-05 34.5 5.1 41 82-122 90-130 (421)
254 PF00698 Acyl_transf_1: Acyl t 79.7 1.7 3.6E-05 35.2 2.6 31 83-113 74-104 (318)
255 smart00827 PKS_AT Acyl transfe 79.4 2.8 6.1E-05 33.4 3.8 31 84-114 73-103 (298)
256 cd07198 Patatin Patatin-like p 79.2 4.3 9.3E-05 29.3 4.4 34 83-116 16-49 (172)
257 COG4822 CbiK Cobalamin biosynt 79.2 9.3 0.0002 28.4 5.8 60 25-99 139-200 (265)
258 cd07231 Pat_SDP1-like Sugar-De 78.6 5.9 0.00013 31.8 5.1 40 83-122 86-125 (323)
259 KOG2872 Uroporphyrinogen decar 78.5 5.1 0.00011 31.2 4.6 70 25-101 253-336 (359)
260 cd07232 Pat_PLPL Patain-like p 78.2 5.3 0.00012 33.5 5.1 41 82-122 84-124 (407)
261 PRK12467 peptide synthase; Pro 78.1 9.7 0.00021 42.4 8.1 84 25-113 3693-3777(3956)
262 cd07225 Pat_PNPLA6_PNPLA7 Pata 77.7 3.9 8.6E-05 32.8 4.1 33 82-114 32-64 (306)
263 TIGR03131 malonate_mdcH malona 77.6 3.4 7.4E-05 32.9 3.8 31 83-113 66-96 (295)
264 cd07207 Pat_ExoU_VipD_like Exo 76.8 5 0.00011 29.6 4.3 38 84-121 18-56 (194)
265 cd07229 Pat_TGL3_like Triacylg 76.6 6.4 0.00014 32.7 5.0 40 84-123 102-141 (391)
266 cd07227 Pat_Fungal_NTE1 Fungal 74.1 5.9 0.00013 31.1 4.1 32 83-114 28-59 (269)
267 TIGR00128 fabD malonyl CoA-acy 73.9 4.6 0.0001 32.1 3.7 30 85-114 74-104 (290)
268 cd07210 Pat_hypo_W_succinogene 73.2 6.7 0.00014 29.8 4.2 30 85-114 20-49 (221)
269 COG3933 Transcriptional antite 72.5 23 0.0005 29.8 7.1 73 25-110 110-182 (470)
270 cd07228 Pat_NTE_like_bacteria 72.4 8.5 0.00018 27.9 4.4 31 86-116 21-51 (175)
271 COG1752 RssA Predicted esteras 72.1 6 0.00013 31.8 3.9 33 82-114 28-60 (306)
272 COG3340 PepE Peptidase E [Amin 71.4 14 0.00031 27.6 5.2 38 23-60 31-71 (224)
273 PF10081 Abhydrolase_9: Alpha/ 70.9 4.6 0.0001 31.5 2.8 54 77-130 90-149 (289)
274 cd07209 Pat_hypo_Ecoli_Z1214_l 70.9 12 0.00025 28.3 5.0 33 83-115 16-48 (215)
275 COG3946 VirJ Type IV secretory 70.9 29 0.00064 28.9 7.2 102 26-127 50-156 (456)
276 PF09994 DUF2235: Uncharacteri 70.7 38 0.00081 26.9 7.9 23 91-113 90-112 (277)
277 TIGR02764 spore_ybaN_pdaB poly 68.8 4 8.6E-05 30.1 2.1 33 26-58 153-188 (191)
278 PHA02114 hypothetical protein 68.8 5.7 0.00012 25.0 2.4 34 25-58 83-116 (127)
279 TIGR02873 spore_ylxY probable 67.4 5.9 0.00013 31.1 2.8 33 26-58 232-264 (268)
280 PF06309 Torsin: Torsin; Inte 66.1 37 0.0008 23.1 5.9 29 23-51 51-81 (127)
281 TIGR02884 spore_pdaA delta-lac 65.4 7 0.00015 29.8 2.8 34 25-58 187-221 (224)
282 cd07205 Pat_PNPLA6_PNPLA7_NTE1 65.1 15 0.00032 26.6 4.5 30 85-114 20-49 (175)
283 PF10605 3HBOH: 3HB-oligomer h 64.4 7.5 0.00016 34.0 3.0 37 95-131 287-324 (690)
284 PF00326 Peptidase_S9: Prolyl 64.3 25 0.00054 26.3 5.7 62 24-89 144-208 (213)
285 PRK05579 bifunctional phosphop 64.2 58 0.0013 27.5 8.1 75 25-100 117-196 (399)
286 COG1073 Hydrolases of the alph 63.6 0.64 1.4E-05 36.7 -3.2 91 23-115 48-154 (299)
287 TIGR00521 coaBC_dfp phosphopan 63.0 82 0.0018 26.5 8.7 75 25-100 113-193 (390)
288 cd03146 GAT1_Peptidase_E Type 62.6 57 0.0012 24.6 7.3 85 23-109 30-129 (212)
289 TIGR02816 pfaB_fam PfaB family 62.3 11 0.00024 33.0 3.7 31 84-114 255-286 (538)
290 PF03610 EIIA-man: PTS system 60.5 47 0.001 22.0 6.3 72 26-110 2-75 (116)
291 cd07208 Pat_hypo_Ecoli_yjju_li 60.4 21 0.00045 28.0 4.8 34 84-117 17-51 (266)
292 cd07224 Pat_like Patatin-like 59.1 27 0.00059 26.8 5.1 34 83-116 17-52 (233)
293 cd07206 Pat_TGL3-4-5_SDP1 Tria 58.9 22 0.00047 28.5 4.5 34 85-118 89-122 (298)
294 PRK06490 glutamine amidotransf 58.1 86 0.0019 24.3 7.7 35 77-111 69-103 (239)
295 PRK05282 (alpha)-aspartyl dipe 57.8 50 0.0011 25.4 6.2 89 23-111 30-130 (233)
296 KOG1252 Cystathionine beta-syn 57.7 39 0.00084 27.5 5.6 53 7-60 187-248 (362)
297 PF01583 APS_kinase: Adenylyls 56.9 17 0.00036 25.9 3.3 35 25-59 2-38 (156)
298 PF03976 PPK2: Polyphosphate k 56.5 11 0.00025 28.7 2.6 37 24-60 30-68 (228)
299 TIGR02069 cyanophycinase cyano 55.8 60 0.0013 25.3 6.4 38 23-60 27-66 (250)
300 PF02590 SPOUT_MTase: Predicte 55.7 68 0.0015 22.8 6.1 72 43-125 60-140 (155)
301 cd07218 Pat_iPLA2 Calcium-inde 55.3 34 0.00075 26.5 5.1 20 96-115 33-52 (245)
302 TIGR03709 PPK2_rel_1 polyphosp 54.7 19 0.00041 28.2 3.5 37 24-60 55-93 (264)
303 PF12242 Eno-Rase_NADH_b: NAD( 53.9 25 0.00054 21.4 3.1 24 91-114 38-61 (78)
304 cd07222 Pat_PNPLA4 Patatin-lik 53.7 33 0.00072 26.6 4.8 23 96-119 34-56 (246)
305 cd07212 Pat_PNPLA9 Patatin-lik 53.1 27 0.00059 28.2 4.4 19 96-114 35-53 (312)
306 cd07204 Pat_PNPLA_like Patatin 52.8 40 0.00086 26.1 5.1 20 96-115 34-53 (243)
307 COG0279 GmhA Phosphoheptose is 52.7 18 0.00038 25.9 2.8 73 28-104 44-120 (176)
308 cd07221 Pat_PNPLA3 Patatin-lik 52.3 42 0.0009 26.2 5.1 27 94-120 33-60 (252)
309 TIGR03707 PPK2_P_aer polyphosp 52.1 23 0.0005 27.1 3.6 37 24-60 30-68 (230)
310 PF04244 DPRP: Deoxyribodipyri 51.9 30 0.00064 26.4 4.1 49 39-98 50-98 (224)
311 COG1448 TyrB Aspartate/tyrosin 51.3 48 0.001 27.5 5.3 84 25-125 172-262 (396)
312 COG3887 Predicted signaling pr 51.1 19 0.00041 31.6 3.2 49 75-126 322-376 (655)
313 PF09314 DUF1972: Domain of un 50.9 99 0.0021 22.8 7.4 87 26-112 5-113 (185)
314 PF05577 Peptidase_S28: Serine 50.6 31 0.00067 29.4 4.6 42 249-300 376-417 (434)
315 PF02230 Abhydrolase_2: Phosph 50.0 46 0.001 25.0 5.1 57 24-89 155-214 (216)
316 cd03818 GT1_ExpC_like This fam 49.4 92 0.002 26.1 7.2 38 27-66 2-39 (396)
317 PF14359 DUF4406: Domain of un 49.4 67 0.0014 20.4 5.8 68 37-114 15-85 (92)
318 PF11713 Peptidase_C80: Peptid 49.2 14 0.0003 26.3 2.0 49 57-105 59-116 (157)
319 COG1506 DAP2 Dipeptidyl aminop 48.9 42 0.0009 30.3 5.3 43 24-66 551-596 (620)
320 COG1087 GalE UDP-glucose 4-epi 47.9 35 0.00075 27.3 4.0 90 42-132 15-124 (329)
321 COG1576 Uncharacterized conser 47.5 52 0.0011 23.3 4.4 55 44-110 61-115 (155)
322 KOG1200 Mitochondrial/plastidi 47.4 80 0.0017 23.6 5.4 32 27-60 16-47 (256)
323 PF03853 YjeF_N: YjeF-related 47.3 23 0.00051 25.5 2.9 34 23-56 24-57 (169)
324 PF00448 SRP54: SRP54-type pro 46.2 1E+02 0.0022 22.9 6.2 63 41-113 73-135 (196)
325 cd06292 PBP1_LacI_like_10 Liga 46.1 1E+02 0.0023 23.9 6.7 75 26-102 58-132 (273)
326 PF14253 AbiH: Bacteriophage a 46.1 20 0.00044 28.1 2.7 15 91-105 233-247 (270)
327 cd01819 Patatin_and_cPLA2 Pata 46.0 45 0.00098 23.6 4.2 26 86-111 19-46 (155)
328 cd05312 NAD_bind_1_malic_enz N 45.5 59 0.0013 25.8 5.0 81 26-110 26-123 (279)
329 COG4667 Predicted esterase of 44.9 58 0.0013 25.5 4.6 40 83-123 30-70 (292)
330 TIGR01626 ytfJ_HI0045 conserve 44.7 40 0.00087 24.8 3.8 51 8-58 39-101 (184)
331 cd03145 GAT1_cyanophycinase Ty 44.1 1.1E+02 0.0025 23.1 6.3 38 23-60 28-67 (217)
332 KOG1202 Animal-type fatty acid 44.1 20 0.00043 34.6 2.5 26 81-106 570-595 (2376)
333 PF06289 FlbD: Flagellar prote 42.6 57 0.0012 18.8 3.3 35 279-315 23-57 (60)
334 TIGR02260 benz_CoA_red_B benzo 42.5 1.9E+02 0.004 24.8 7.8 39 24-63 266-304 (413)
335 PF05724 TPMT: Thiopurine S-me 42.0 23 0.00049 26.9 2.3 31 25-60 38-68 (218)
336 PRK15219 carbonic anhydrase; P 40.6 47 0.001 25.8 3.7 34 78-111 128-161 (245)
337 cd00006 PTS_IIA_man PTS_IIA, P 40.5 1.1E+02 0.0024 20.5 5.8 70 26-108 3-73 (122)
338 cd07220 Pat_PNPLA2 Patatin-lik 40.4 77 0.0017 24.7 4.9 21 95-115 38-58 (249)
339 PRK13256 thiopurine S-methyltr 39.9 25 0.00054 26.8 2.2 29 27-60 46-74 (226)
340 COG0331 FabD (acyl-carrier-pro 39.9 44 0.00095 27.0 3.6 22 91-112 83-104 (310)
341 PRK09273 hypothetical protein; 39.9 1.6E+02 0.0035 22.2 6.6 71 36-116 15-86 (211)
342 TIGR03607 patatin-related prot 39.4 76 0.0016 29.3 5.3 31 82-112 52-85 (739)
343 PRK00103 rRNA large subunit me 39.0 80 0.0017 22.5 4.4 50 44-104 61-110 (157)
344 PRK09936 hypothetical protein; 38.0 99 0.0021 24.7 5.1 51 36-92 36-86 (296)
345 COG3673 Uncharacterized conser 37.8 2.3E+02 0.0049 23.2 8.9 89 25-113 32-142 (423)
346 PF03205 MobB: Molybdopterin g 37.7 54 0.0012 22.8 3.4 44 26-69 1-46 (140)
347 PRK14457 ribosomal RNA large s 36.6 2.3E+02 0.0049 23.5 7.2 75 27-110 260-336 (345)
348 PRK14729 miaA tRNA delta(2)-is 36.6 2.1E+02 0.0045 23.2 6.9 75 25-101 4-101 (300)
349 cd00382 beta_CA Carbonic anhyd 36.2 49 0.0011 22.2 2.9 31 78-108 44-74 (119)
350 COG2185 Sbm Methylmalonyl-CoA 35.7 1.6E+02 0.0034 20.7 6.3 38 22-59 10-48 (143)
351 PF08484 Methyltransf_14: C-me 35.3 74 0.0016 22.8 3.9 47 76-122 50-98 (160)
352 PF08433 KTI12: Chromatin asso 35.3 1E+02 0.0023 24.3 5.0 38 26-63 2-41 (270)
353 COG0505 CarA Carbamoylphosphat 35.2 1.1E+02 0.0024 25.2 5.0 65 41-111 191-267 (368)
354 COG0218 Predicted GTPase [Gene 35.0 64 0.0014 24.1 3.5 22 247-268 133-154 (200)
355 KOG1209 1-Acyl dihydroxyaceton 34.9 56 0.0012 24.7 3.2 38 22-60 4-41 (289)
356 PRK05368 homoserine O-succinyl 34.9 41 0.0009 27.0 2.8 32 82-113 123-154 (302)
357 PLN03050 pyridoxine (pyridoxam 34.6 62 0.0013 25.2 3.6 34 25-58 61-94 (246)
358 PRK05665 amidotransferase; Pro 34.2 84 0.0018 24.3 4.3 38 74-111 71-108 (240)
359 PRK01261 aroD 3-dehydroquinate 34.2 72 0.0016 24.5 3.8 28 77-104 159-186 (229)
360 COG0541 Ffh Signal recognition 33.8 88 0.0019 26.6 4.5 48 76-123 197-246 (451)
361 KOG2214 Predicted esterase of 33.7 50 0.0011 28.5 3.1 32 91-122 200-231 (543)
362 PRK00726 murG undecaprenyldiph 33.6 2.5E+02 0.0054 23.1 7.3 34 27-60 5-38 (357)
363 PRK14581 hmsF outer membrane N 33.5 47 0.001 30.2 3.1 78 23-100 47-142 (672)
364 PF10686 DUF2493: Protein of u 33.5 81 0.0018 18.9 3.2 11 24-34 31-41 (71)
365 cd03379 beta_CA_cladeD Carboni 33.4 65 0.0014 22.4 3.3 31 78-108 41-71 (142)
366 cd00883 beta_CA_cladeA Carboni 33.4 56 0.0012 24.0 3.1 33 79-111 67-99 (182)
367 cd03131 GATase1_HTS Type 1 glu 33.1 18 0.0004 26.3 0.5 36 79-114 83-118 (175)
368 cd04951 GT1_WbdM_like This fam 32.7 2.7E+02 0.0058 22.6 7.4 35 27-61 3-39 (360)
369 PF13207 AAA_17: AAA domain; P 32.5 1.1E+02 0.0024 20.1 4.3 37 27-65 1-40 (121)
370 KOG2316 Predicted ATPase (PP-l 32.1 52 0.0011 24.8 2.6 48 62-109 73-120 (277)
371 COG1582 FlgEa Uncharacterized 31.7 1.1E+02 0.0024 17.8 3.4 35 279-315 23-57 (67)
372 PRK11460 putative hydrolase; P 31.3 1.2E+02 0.0026 23.2 4.8 40 24-63 148-190 (232)
373 TIGR00246 tRNA_RlmH_YbeA rRNA 31.0 81 0.0017 22.4 3.4 46 52-108 66-111 (153)
374 cd07217 Pat17_PNPLA8_PNPLA9_li 30.9 47 0.001 27.4 2.6 19 96-114 44-62 (344)
375 PF01734 Patatin: Patatin-like 30.8 58 0.0013 23.5 3.0 21 93-113 27-47 (204)
376 PRK11320 prpB 2-methylisocitra 30.7 2.9E+02 0.0062 22.3 7.2 65 32-100 88-156 (292)
377 COG0031 CysK Cysteine synthase 30.7 2.9E+02 0.0063 22.4 8.4 85 26-115 170-281 (300)
378 PF09419 PGP_phosphatase: Mito 30.5 1.8E+02 0.0039 21.1 5.1 55 46-104 35-89 (168)
379 PF09695 YtfJ_HI0045: Bacteria 30.3 1E+02 0.0022 22.0 3.7 45 7-51 16-66 (160)
380 COG1763 MobB Molybdopterin-gua 30.2 98 0.0021 22.2 3.7 39 25-63 2-42 (161)
381 PRK04148 hypothetical protein; 29.5 96 0.0021 21.5 3.5 21 93-113 18-38 (134)
382 COG0159 TrpA Tryptophan syntha 29.5 2.1E+02 0.0046 22.6 5.6 61 25-101 96-157 (265)
383 cd02065 B12-binding_like B12 b 29.4 1.7E+02 0.0037 19.3 5.9 33 26-58 2-34 (125)
384 cd07025 Peptidase_S66 LD-Carbo 29.4 2.2E+02 0.0047 22.8 6.0 56 28-88 3-59 (282)
385 PF00484 Pro_CA: Carbonic anhy 29.3 1.3E+02 0.0029 21.1 4.4 36 76-111 38-73 (153)
386 PRK10437 carbonic anhydrase; P 29.3 86 0.0019 23.9 3.5 33 79-111 77-109 (220)
387 PF14488 DUF4434: Domain of un 29.2 1.1E+02 0.0025 22.0 4.0 60 34-93 16-80 (166)
388 PRK06259 succinate dehydrogena 29.0 2.5E+02 0.0055 24.5 6.8 72 24-96 260-335 (486)
389 COG3621 Patatin [General funct 28.9 1.2E+02 0.0025 24.8 4.2 51 52-115 9-64 (394)
390 PRK14974 cell division protein 28.8 1.6E+02 0.0035 24.3 5.2 57 48-114 219-275 (336)
391 PRK11613 folP dihydropteroate 28.5 3.1E+02 0.0068 22.0 6.8 58 41-107 166-225 (282)
392 COG3727 Vsr DNA G:T-mismatch r 28.3 93 0.002 21.3 3.1 9 25-33 58-66 (150)
393 cd07213 Pat17_PNPLA8_PNPLA9_li 28.3 55 0.0012 26.1 2.5 19 96-114 37-55 (288)
394 PRK13255 thiopurine S-methyltr 28.3 48 0.001 25.2 2.1 17 44-60 52-68 (218)
395 PRK14194 bifunctional 5,10-met 28.2 1.1E+02 0.0023 24.7 4.0 34 80-113 143-182 (301)
396 cd07211 Pat_PNPLA8 Patatin-lik 28.1 49 0.0011 26.7 2.3 17 96-112 44-60 (308)
397 PRK07313 phosphopantothenoylcy 28.1 2.3E+02 0.005 20.8 5.5 60 24-87 113-178 (182)
398 TIGR01361 DAHP_synth_Bsub phos 28.0 3E+02 0.0066 21.7 7.0 73 24-103 132-206 (260)
399 PLN02752 [acyl-carrier protein 27.9 69 0.0015 26.4 3.1 19 95-113 126-144 (343)
400 PF06415 iPGM_N: BPG-independe 27.9 1.9E+02 0.004 22.2 5.0 60 36-100 44-104 (223)
401 PF02633 Creatininase: Creatin 27.6 1.6E+02 0.0034 22.7 4.9 72 41-113 43-121 (237)
402 TIGR02540 gpx7 putative glutat 27.6 2E+02 0.0043 20.1 5.1 57 10-66 9-70 (153)
403 PRK14582 pgaB outer membrane N 27.6 63 0.0014 29.4 3.0 77 23-99 47-141 (671)
404 PF03490 Varsurf_PPLC: Variant 27.5 69 0.0015 17.5 1.9 27 73-99 5-31 (51)
405 COG0518 GuaA GMP synthase - Gl 27.3 2.7E+02 0.0058 20.9 7.5 37 75-111 60-96 (198)
406 PF13383 Methyltransf_22: Meth 27.2 87 0.0019 24.3 3.3 36 24-59 192-227 (242)
407 TIGR01425 SRP54_euk signal rec 27.0 2.1E+02 0.0045 24.6 5.7 61 45-115 176-236 (429)
408 PF01075 Glyco_transf_9: Glyco 26.9 96 0.0021 23.8 3.7 34 24-57 105-143 (247)
409 PLN03006 carbonate dehydratase 26.9 81 0.0018 25.3 3.1 31 79-109 158-188 (301)
410 TIGR02883 spore_cwlD N-acetylm 26.9 1.4E+02 0.003 22.0 4.3 38 54-92 2-44 (189)
411 COG5441 Uncharacterized conser 26.5 3E+02 0.0065 22.3 5.9 97 26-122 3-122 (401)
412 PF01656 CbiA: CobQ/CobB/MinD/ 26.4 68 0.0015 23.4 2.6 32 28-59 2-35 (195)
413 cd03129 GAT1_Peptidase_E_like 26.2 2.8E+02 0.0062 20.8 7.2 87 23-110 28-130 (210)
414 TIGR02813 omega_3_PfaA polyket 26.1 72 0.0016 34.4 3.4 31 83-113 664-694 (2582)
415 PF13439 Glyco_transf_4: Glyco 26.1 1.6E+02 0.0036 20.5 4.6 29 32-60 10-38 (177)
416 cd08185 Fe-ADH1 Iron-containin 26.0 3E+02 0.0065 23.1 6.5 64 25-99 26-91 (380)
417 PF03681 UPF0150: Uncharacteri 25.9 1.2E+02 0.0025 16.2 2.9 33 49-88 11-43 (48)
418 PF05973 Gp49: Phage derived p 25.9 85 0.0018 19.6 2.6 22 13-35 52-73 (91)
419 TIGR02572 LcrR type III secret 25.7 1.6E+02 0.0034 20.3 3.8 73 9-82 32-106 (139)
420 cd00884 beta_CA_cladeB Carboni 25.6 96 0.0021 23.0 3.2 33 79-111 73-105 (190)
421 KOG3179 Predicted glutamine sy 25.6 1.1E+02 0.0025 22.8 3.4 39 73-111 72-110 (245)
422 PLN02251 pyrophosphate-depende 25.3 2.6E+02 0.0057 25.1 6.1 85 27-112 193-288 (568)
423 PRK05723 flavodoxin; Provision 25.2 88 0.0019 22.1 2.8 22 75-96 100-121 (151)
424 TIGR00632 vsr DNA mismatch end 25.1 74 0.0016 21.4 2.2 13 45-57 101-113 (117)
425 PF03033 Glyco_transf_28: Glyc 25.0 61 0.0013 22.0 2.1 32 27-58 2-33 (139)
426 KOG4231 Intracellular membrane 25.0 81 0.0018 27.4 2.9 56 46-114 411-471 (763)
427 PLN03019 carbonic anhydrase 24.7 89 0.0019 25.4 3.0 32 79-110 201-232 (330)
428 COG1255 Uncharacterized protei 24.3 53 0.0011 21.9 1.4 22 39-60 24-45 (129)
429 COG0288 CynT Carbonic anhydras 23.9 74 0.0016 24.0 2.3 36 77-112 76-111 (207)
430 PF00731 AIRC: AIR carboxylase 23.9 2.6E+02 0.0056 19.9 4.8 74 25-113 1-76 (150)
431 cd03144 GATase1_ScBLP_like Typ 23.8 92 0.002 20.8 2.5 14 94-107 77-90 (114)
432 COG0482 TrmU Predicted tRNA(5- 23.8 1.7E+02 0.0038 24.2 4.5 60 26-93 6-65 (356)
433 PRK07933 thymidylate kinase; V 23.8 1.5E+02 0.0034 22.3 4.1 39 27-65 2-42 (213)
434 TIGR03586 PseI pseudaminic aci 23.5 4.2E+02 0.0091 21.8 7.7 79 24-112 134-213 (327)
435 PF04763 DUF562: Protein of un 23.5 1.8E+02 0.004 20.1 3.8 38 24-61 17-61 (146)
436 cd07199 Pat17_PNPLA8_PNPLA9_li 23.4 1.5E+02 0.0033 23.1 4.2 18 96-113 37-54 (258)
437 COG2452 Predicted site-specifi 23.4 3.1E+02 0.0067 20.4 5.1 54 26-91 117-170 (193)
438 TIGR03840 TMPT_Se_Te thiopurin 23.2 63 0.0014 24.4 1.9 17 44-60 49-65 (213)
439 TIGR00176 mobB molybdopterin-g 23.1 1.2E+02 0.0025 21.6 3.2 37 27-63 1-39 (155)
440 COG0859 RfaF ADP-heptose:LPS h 23.0 1.2E+02 0.0026 24.8 3.7 34 24-57 175-214 (334)
441 TIGR00421 ubiX_pad polyprenyl 22.9 3.2E+02 0.0068 20.1 6.7 45 41-93 129-174 (181)
442 PF00578 AhpC-TSA: AhpC/TSA fa 22.7 1E+02 0.0022 20.4 2.7 50 10-59 12-67 (124)
443 PRK13397 3-deoxy-7-phosphohept 22.7 3.7E+02 0.008 21.1 5.8 39 24-62 122-160 (250)
444 PF11009 DUF2847: Protein of u 22.5 2.4E+02 0.0052 18.6 4.7 35 80-114 7-41 (105)
445 PLN00416 carbonate dehydratase 22.5 1.3E+02 0.0028 23.7 3.4 33 79-111 126-158 (258)
446 PRK00091 miaA tRNA delta(2)-is 22.5 3.3E+02 0.0072 22.1 5.9 64 25-90 4-89 (307)
447 TIGR03569 NeuB_NnaB N-acetylne 22.1 4E+02 0.0086 22.0 6.2 79 24-112 133-214 (329)
448 PRK13982 bifunctional SbtC-lik 21.9 5.5E+02 0.012 22.6 7.9 61 24-88 180-247 (475)
449 PRK15180 Vi polysaccharide bio 21.8 2.8E+02 0.0061 24.2 5.4 78 25-102 97-198 (831)
450 cd01983 Fer4_NifH The Fer4_Nif 21.8 1.2E+02 0.0027 18.5 2.9 30 29-58 3-34 (99)
451 PF00862 Sucrose_synth: Sucros 21.7 2.8E+02 0.006 24.5 5.4 38 76-113 383-422 (550)
452 PRK03846 adenylylsulfate kinas 21.6 1.6E+02 0.0035 21.8 3.8 37 22-58 21-59 (198)
453 PRK13398 3-deoxy-7-phosphohept 21.6 4.2E+02 0.009 21.0 7.2 39 24-62 134-172 (266)
454 PRK09004 FMN-binding protein M 21.5 1.9E+02 0.0041 20.2 3.9 15 79-93 101-115 (146)
455 PRK06849 hypothetical protein; 21.5 1.9E+02 0.0041 24.3 4.6 61 40-101 17-85 (389)
456 PRK07053 glutamine amidotransf 21.4 3.9E+02 0.0084 20.6 6.7 33 79-111 68-100 (234)
457 cd01423 MGS_CPS_I_III Methylgl 21.4 1.3E+02 0.0028 19.9 3.0 22 35-56 10-31 (116)
458 PRK14456 ribosomal RNA large s 21.3 5E+02 0.011 21.8 6.9 75 27-110 283-359 (368)
459 TIGR03708 poly_P_AMP_trns poly 21.2 1.5E+02 0.0032 26.0 3.9 39 23-61 38-78 (493)
460 PF04084 ORC2: Origin recognit 21.1 3.8E+02 0.0081 22.1 6.0 32 75-106 118-150 (326)
461 PRK10964 ADP-heptose:LPS hepto 21.1 1.4E+02 0.0031 24.2 3.7 51 247-314 270-321 (322)
462 PRK14538 putative bifunctional 21.0 2.3E+02 0.005 26.9 5.2 60 51-112 323-393 (838)
463 smart00500 SFM Splicing Factor 21.0 1E+02 0.0022 16.5 1.8 22 82-104 5-26 (44)
464 PRK04435 hypothetical protein; 20.9 2.2E+02 0.0048 20.0 4.1 79 19-100 62-146 (147)
465 cd07216 Pat17_PNPLA8_PNPLA9_li 20.9 71 0.0015 25.8 1.9 17 96-112 45-61 (309)
466 PLN03014 carbonic anhydrase 20.8 1.2E+02 0.0027 24.9 3.1 32 79-110 206-237 (347)
467 KOG1412 Aspartate aminotransfe 20.7 2.1E+02 0.0045 23.3 4.2 43 26-69 179-228 (410)
468 TIGR03127 RuMP_HxlB 6-phospho 20.7 2.1E+02 0.0045 20.7 4.2 32 27-58 32-63 (179)
469 PRK06696 uridine kinase; Valid 20.6 1.8E+02 0.0038 22.1 3.9 35 22-56 19-55 (223)
470 TIGR02683 upstrm_HI1419 probab 20.6 2E+02 0.0044 18.3 3.6 21 13-34 57-77 (95)
471 COG4850 Uncharacterized conser 20.4 1.6E+02 0.0034 24.0 3.5 87 39-127 226-314 (373)
472 PLN02154 carbonic anhydrase 20.3 1.4E+02 0.0031 23.8 3.3 32 79-110 152-183 (290)
473 PRK10319 N-acetylmuramoyl-l-al 20.3 2.3E+02 0.0049 22.8 4.5 41 51-92 55-100 (287)
474 PRK08762 molybdopterin biosynt 20.2 5.3E+02 0.011 21.7 7.1 37 88-127 131-168 (376)
475 PRK13753 dihydropteroate synth 20.1 2.6E+02 0.0057 22.3 4.7 59 46-110 159-219 (279)
476 cd03378 beta_CA_cladeC Carboni 20.1 1.6E+02 0.0034 21.0 3.2 31 79-109 78-108 (154)
477 PLN02748 tRNA dimethylallyltra 20.1 5.8E+02 0.013 22.4 7.0 76 24-101 21-120 (468)
No 1
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=100.00 E-value=3.8e-47 Score=284.36 Aligned_cols=300 Identities=51% Similarity=0.993 Sum_probs=263.2
Q ss_pred CCCCceeEEEeCCeeEEEEEeCC--CCeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHH
Q 021158 1 MEKIEHTTVATNGINMHVASIGT--GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALH 78 (316)
Q Consensus 1 m~~~~~~~~~~~g~~l~~~~~g~--~p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~ 78 (316)
++.+++++++.+|.+++|.+.|+ +|.|+++||++.+..+|+.....|+.+||+|+++|+||+|.|+.++....|++..
T Consensus 19 ~~~~~hk~~~~~gI~~h~~e~g~~~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~ 98 (322)
T KOG4178|consen 19 LSAISHKFVTYKGIRLHYVEGGPGDGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDE 98 (322)
T ss_pred hhhcceeeEEEccEEEEEEeecCCCCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHH
Confidence 35788999999999999999884 7999999999999999999999999999999999999999999999878999999
Q ss_pred HHHHHHHHHHHhCCcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCCCCCCccccchhhhhhccccchhhccCCc
Q 021158 79 LVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQEPG 158 (316)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (316)
++.|+..++++++.++++++||+||+++|+.+|..+|++|+++|+++.+.. .+...........+...++...++.+.
T Consensus 99 l~~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~--~p~~~~~~~~~~~f~~~~y~~~fQ~~~ 176 (322)
T KOG4178|consen 99 LVGDIVALLDHLGLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFP--NPKLKPLDSSKAIFGKSYYICLFQEPG 176 (322)
T ss_pred HHHHHHHHHHHhccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCC--CcccchhhhhccccCccceeEeccccC
Confidence 999999999999999999999999999999999999999999999998776 566667777788888889999999999
Q ss_pred chHHHHhhhchHHHHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhccCCcCcccccccccccccc
Q 021158 159 EIEEEFAQIDTARLMKKFLCLRIPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFNQKGFTGPVNYYRCWDLNWE 238 (316)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (316)
..+..+.....+.+...++......+...+. .....+.|+++++++.+...+...++...+++++.+...+.
T Consensus 177 ~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~ 248 (322)
T KOG4178|consen 177 KPETELSKDDTEMLVKTFRTRKTPGPLIVPK--------QPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWE 248 (322)
T ss_pred cchhhhccchhHHhHHhhhccccCCccccCC--------CCCCccchhhHHHHHHHHhccccccccccchhhHHHhhCch
Confidence 9999998888888888888776665544443 11122678899999999999999999999999999999886
Q ss_pred cccCCCCccccCcEEEEEeCCCcccCCCCcchhcccccccccccCcccEEEEcCCCcccchhhHHHHHHHHHHHHHhC
Q 021158 239 LMAPWTGVQIKVPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQEKAEEVGAHIYEFIKKF 316 (316)
Q Consensus 239 ~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 316 (316)
...+..+++++|+++|+|+.|.+.+..... +.+.+..|+..+.++++|+||+++.|+|+++++.|.+|++++
T Consensus 249 -a~~~~~~~i~iPv~fi~G~~D~v~~~p~~~-----~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 249 -AAPWALAKITIPVLFIWGDLDPVLPYPIFG-----ELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAILGFINSF 320 (322)
T ss_pred -hccccccccccceEEEEecCcccccchhHH-----HHHHHhhccccceEEecCCcccccccCHHHHHHHHHHHHHhh
Confidence 556666799999999999999999987332 335677777646888999999999999999999999999864
No 2
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=1.1e-39 Score=257.91 Aligned_cols=280 Identities=21% Similarity=0.260 Sum_probs=181.4
Q ss_pred CCceeEEEeCCeeEEEEEeCC-CCeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCC-----CcchhH
Q 021158 3 KIEHTTVATNGINMHVASIGT-GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPS-----VTSYTA 76 (316)
Q Consensus 3 ~~~~~~~~~~g~~l~~~~~g~-~p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~-----~~~~~~ 76 (316)
+++.++++++|.+++|...|+ +|+|||+||+++++..|..+++.|.++ |+|+++|+||||.|+.+.. ...+++
T Consensus 7 ~~~~~~~~~~~~~i~y~~~G~~~~~vlllHG~~~~~~~w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~ 85 (294)
T PLN02824 7 QVETRTWRWKGYNIRYQRAGTSGPALVLVHGFGGNADHWRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFYTF 85 (294)
T ss_pred CCCCceEEEcCeEEEEEEcCCCCCeEEEECCCCCChhHHHHHHHHHHhC-CeEEEEcCCCCCCCCCCccccccccccCCH
Confidence 567888999999999999994 899999999999999999999999987 8999999999999986531 135899
Q ss_pred HHHHHHHHHHHHHhCCcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCCCCCCccccchhhhhhccccchhhccC
Q 021158 77 LHLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQE 156 (316)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (316)
+++++++.+++++++.++++++||||||.+++.+|.++|++|+++|++++........... ........ . ....+..
T Consensus 86 ~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~-~~~~~~~~-~-~~~~~~~ 162 (294)
T PLN02824 86 ETWGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQP-WLGRPFIK-A-FQNLLRE 162 (294)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccc-hhhhHHHH-H-HHHHHhc
Confidence 9999999999999999999999999999999999999999999999999764321110000 00000000 0 0000000
Q ss_pred CcchHHHHhhhchHHHHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhccCCcC-ccccccccccc
Q 021158 157 PGEIEEEFAQIDTARLMKKFLCLRIPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFNQKGFT-GPVNYYRCWDL 235 (316)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 235 (316)
.......+........+..++...... ...++++....+.......... ...........
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (294)
T PLN02824 163 TAVGKAFFKSVATPETVKNILCQCYHD-------------------DSAVTDELVEAILRPGLEPGAVDVFLDFISYSGG 223 (294)
T ss_pred hhHHHHHHHhhcCHHHHHHHHHHhccC-------------------hhhccHHHHHHHHhccCCchHHHHHHHHhccccc
Confidence 000000011001111111111110000 0001122222221111000000 00000000000
Q ss_pred -ccccccCCCCccccCcEEEEEeCCCcccCCCCcchhcccccccccccCcccEEEEcCCCcccchhhHHHHHHHHHHHHH
Q 021158 236 -NWELMAPWTGVQIKVPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQEKAEEVGAHIYEFIK 314 (316)
Q Consensus 236 -~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 314 (316)
..... +.++++|+|+|+|++|.++|.+..+. +++..++. ++++++++||++++|+|+++++.|.+|++
T Consensus 224 ~~~~~~----l~~i~~P~lvi~G~~D~~~~~~~~~~------~~~~~~~~-~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 292 (294)
T PLN02824 224 PLPEEL----LPAVKCPVLIAWGEKDPWEPVELGRA------YANFDAVE-DFIVLPGVGHCPQDEAPELVNPLIESFVA 292 (294)
T ss_pred cchHHH----HhhcCCCeEEEEecCCCCCChHHHHH------HHhcCCcc-ceEEeCCCCCChhhhCHHHHHHHHHHHHh
Confidence 00111 12889999999999999999876544 56677778 99999999999999999999999999998
Q ss_pred hC
Q 021158 315 KF 316 (316)
Q Consensus 315 ~~ 316 (316)
++
T Consensus 293 ~~ 294 (294)
T PLN02824 293 RH 294 (294)
T ss_pred cC
Confidence 75
No 3
>PRK03592 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=1.3e-38 Score=251.92 Aligned_cols=275 Identities=25% Similarity=0.408 Sum_probs=180.7
Q ss_pred CCceeEEEeCCeeEEEEEeCCCCeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHH
Q 021158 3 KIEHTTVATNGINMHVASIGTGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGD 82 (316)
Q Consensus 3 ~~~~~~~~~~g~~l~~~~~g~~p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~ 82 (316)
..+..+++++|.+++|...|++|+|||+||++++...|..+++.|.+. ++|+++|+||||.|+.+. ..++.+++++|
T Consensus 6 ~~~~~~~~~~g~~i~y~~~G~g~~vvllHG~~~~~~~w~~~~~~L~~~-~~via~D~~G~G~S~~~~--~~~~~~~~a~d 82 (295)
T PRK03592 6 PGEMRRVEVLGSRMAYIETGEGDPIVFLHGNPTSSYLWRNIIPHLAGL-GRCLAPDLIGMGASDKPD--IDYTFADHARY 82 (295)
T ss_pred CCcceEEEECCEEEEEEEeCCCCEEEEECCCCCCHHHHHHHHHHHhhC-CEEEEEcCCCCCCCCCCC--CCCCHHHHHHH
Confidence 345677889999999999999999999999999999999999999998 599999999999998765 46899999999
Q ss_pred HHHHHHHhCCcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCCCCCCccccchhhhhhccccchhhccCCcchHH
Q 021158 83 LIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQEPGEIEE 162 (316)
Q Consensus 83 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (316)
+..++++++.++++++||||||.+|+.++.++|++|+++|++++...+.... ......... ...+..+.....
T Consensus 83 l~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~~~~~ 155 (295)
T PRK03592 83 LDAWFDALGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWD-DFPPAVREL------FQALRSPGEGEE 155 (295)
T ss_pred HHHHHHHhCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchh-hcchhHHHH------HHHHhCcccccc
Confidence 9999999999999999999999999999999999999999999844321100 000000000 000000000000
Q ss_pred HHhhhchHHHHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhccCCc-Cccccccccccccc----
Q 021158 163 EFAQIDTARLMKKFLCLRIPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFNQKGF-TGPVNYYRCWDLNW---- 237 (316)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---- 237 (316)
.. .....++..++... ....++++....+...+..... .....+++......
T Consensus 156 ~~--~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (295)
T PRK03592 156 MV--LEENVFIERVLPGS---------------------ILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPAD 212 (295)
T ss_pred cc--cchhhHHhhcccCc---------------------ccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchh
Confidence 00 00000111111100 0011233333333322211110 11111111110000
Q ss_pred --c--cccCCCCccccCcEEEEEeCCCcccCCCCcchhcccccccccccCcccEEEEcCCCcccchhhHHHHHHHHHHHH
Q 021158 238 --E--LMAPWTGVQIKVPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQEKAEEVGAHIYEFI 313 (316)
Q Consensus 238 --~--~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 313 (316)
. ......+.++++|+|+|+|++|.++++....++ ..+..+++ ++++++++||+++.|+|+++++.|.+|+
T Consensus 213 ~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~-----~~~~~~~~-~~~~i~~~gH~~~~e~p~~v~~~i~~fl 286 (295)
T PRK03592 213 VVALVEEYAQWLATSDVPKLLINAEPGAILTTGAIRDW-----CRSWPNQL-EITVFGAGLHFAQEDSPEEIGAAIAAWL 286 (295)
T ss_pred hHhhhhHhHHHhccCCCCeEEEeccCCcccCcHHHHHH-----HHHhhhhc-ceeeccCcchhhhhcCHHHHHHHHHHHH
Confidence 0 000011227899999999999999966554442 34556788 9999999999999999999999999999
Q ss_pred HhC
Q 021158 314 KKF 316 (316)
Q Consensus 314 ~~~ 316 (316)
+++
T Consensus 287 ~~~ 289 (295)
T PRK03592 287 RRL 289 (295)
T ss_pred HHh
Confidence 863
No 4
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=7.1e-38 Score=252.50 Aligned_cols=281 Identities=21% Similarity=0.294 Sum_probs=176.5
Q ss_pred eEEEeCCe-eEEEEEeCCC------CeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHH
Q 021158 7 TTVATNGI-NMHVASIGTG------PAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHL 79 (316)
Q Consensus 7 ~~~~~~g~-~l~~~~~g~~------p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~ 79 (316)
+.+..+|. +++|...|++ |+|||+||++++...|.++++.|.+ +|+|+++|+||||.|+.+.. ..++.+++
T Consensus 64 ~~~~~~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~-~~~~~~~~ 141 (360)
T PLN02679 64 KKWKWKGEYSINYLVKGSPEVTSSGPPVLLVHGFGASIPHWRRNIGVLAK-NYTVYAIDLLGFGASDKPPG-FSYTMETW 141 (360)
T ss_pred ceEEECCceeEEEEEecCcccCCCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCCC-ccccHHHH
Confidence 45667777 9999999976 9999999999999999999999987 59999999999999987643 46789999
Q ss_pred HHHHHHHHHHhCCcceEEEEecHHHHHHHHHHh-hchhHHhhhhhccCCCCCCCCCccccchhhhhhccccchhhc-cCC
Q 021158 80 VGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCL-FRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRF-QEP 157 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~-~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 157 (316)
++++.+++++++.++++|+||||||.+++.++. .+|++|+++|+++++.....................++...+ ..+
T Consensus 142 a~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (360)
T PLN02679 142 AELILDFLEEVVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQR 221 (360)
T ss_pred HHHHHHHHHHhcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhch
Confidence 999999999999999999999999999999887 479999999999986532111000000000000000000000 001
Q ss_pred cchHHHHhhhchHHHHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhccCCcCcc-ccccccc-cc
Q 021158 158 GEIEEEFAQIDTARLMKKFLCLRIPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFNQKGFTGP-VNYYRCW-DL 235 (316)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~ 235 (316)
......+........++.++...... ...+.++..+.+............ ....... ..
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (360)
T PLN02679 222 GIASALFNRVKQRDNLKNILLSVYGN-------------------KEAVDDELVEIIRGPADDEGALDAFVSIVTGPPGP 282 (360)
T ss_pred hhHHHHHHHhcCHHHHHHHHHHhccC-------------------cccCCHHHHHHHHhhccCCChHHHHHHHHhcCCCC
Confidence 11111111111112222222211000 001122222222211111100000 0000000 00
Q ss_pred ccccccCCCCccccCcEEEEEeCCCcccCCCCcc-hhcccccccccccCcccEEEEcCCCcccchhhHHHHHHHHHHHHH
Q 021158 236 NWELMAPWTGVQIKVPVKYIVGDQDLVYNNKGTK-EYIHNGGFKKYVPYLQDVVVMEGVAHFINQEKAEEVGAHIYEFIK 314 (316)
Q Consensus 236 ~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 314 (316)
..... +.++++|+|+|+|++|.++|++... .++ +.+.+..|++ ++++++++||++++|+|+++++.|.+||+
T Consensus 283 ~~~~~----l~~i~~PtLii~G~~D~~~p~~~~~~~~~--~~l~~~ip~~-~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~ 355 (360)
T PLN02679 283 NPIKL----IPRISLPILVLWGDQDPFTPLDGPVGKYF--SSLPSQLPNV-TLYVLEGVGHCPHDDRPDLVHEKLLPWLA 355 (360)
T ss_pred CHHHH----hhhcCCCEEEEEeCCCCCcCchhhHHHHH--HhhhccCCce-EEEEcCCCCCCccccCHHHHHHHHHHHHH
Confidence 00111 1288999999999999999986421 111 2356678998 99999999999999999999999999997
Q ss_pred h
Q 021158 315 K 315 (316)
Q Consensus 315 ~ 315 (316)
+
T Consensus 356 ~ 356 (360)
T PLN02679 356 Q 356 (360)
T ss_pred h
Confidence 6
No 5
>PRK00870 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=7.7e-38 Score=248.02 Aligned_cols=267 Identities=24% Similarity=0.338 Sum_probs=173.1
Q ss_pred CceeEEEeCC-----eeEEEEEeCC--CCeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhH
Q 021158 4 IEHTTVATNG-----INMHVASIGT--GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTA 76 (316)
Q Consensus 4 ~~~~~~~~~g-----~~l~~~~~g~--~p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~ 76 (316)
...+++++++ .+++|...|+ +|+|||+||++++...|..+++.|.++||+|+++|+||||.|+.+.....+++
T Consensus 19 ~~~~~~~~~~~~~~~~~i~y~~~G~~~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~ 98 (302)
T PRK00870 19 FAPHYVDVDDGDGGPLRMHYVDEGPADGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYTY 98 (302)
T ss_pred CCceeEeecCCCCceEEEEEEecCCCCCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCCH
Confidence 4567788888 8999999885 79999999999999999999999988899999999999999987653346889
Q ss_pred HHHHHHHHHHHHHhCCcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCCCCC-Cccccchhhhhhccccchhhcc
Q 021158 77 LHLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNP-AVRPLNNFRAVYGDDYYICRFQ 155 (316)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 155 (316)
+++++++.+++++++.++++++||||||.+++.+|.++|++|+++|++++....... ........... .. .
T Consensus 99 ~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~------~~--~ 170 (302)
T PRK00870 99 ARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPDAFWAWRAF------SQ--Y 170 (302)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchHHHhhhhcc------cc--c
Confidence 999999999999999999999999999999999999999999999999864321110 00000000000 00 0
Q ss_pred CCcc-hHHHHhhh----chHHHHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhccCCcCcccccc
Q 021158 156 EPGE-IEEEFAQI----DTARLMKKFLCLRIPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFNQKGFTGPVNYY 230 (316)
Q Consensus 156 ~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (316)
.+.. ....+... ........+... ...+.....................
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (302)
T PRK00870 171 SPVLPVGRLVNGGTVRDLSDAVRAAYDAP--------------------------FPDESYKAGARAFPLLVPTSPDDPA 224 (302)
T ss_pred CchhhHHHHhhccccccCCHHHHHHhhcc--------------------------cCChhhhcchhhhhhcCCCCCCCcc
Confidence 0000 00000000 000000000000 0000000000000000000000000
Q ss_pred cccccccccccCCCCccccCcEEEEEeCCCcccCCCCcchhcccccccccccCccc---EEEEcCCCcccchhhHHHHHH
Q 021158 231 RCWDLNWELMAPWTGVQIKVPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYVPYLQD---VVVMEGVAHFINQEKAEEVGA 307 (316)
Q Consensus 231 ~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~gH~~~~~~~~~~~~ 307 (316)
......... .+.++++|+++|+|++|.++|... +. +++..++. + +++++++||++++|+|+++++
T Consensus 225 ~~~~~~~~~----~l~~i~~P~lii~G~~D~~~~~~~-~~------~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~ 292 (302)
T PRK00870 225 VAANRAAWA----VLERWDKPFLTAFSDSDPITGGGD-AI------LQKRIPGA-AGQPHPTIKGAGHFLQEDSGEELAE 292 (302)
T ss_pred hHHHHHHHH----hhhcCCCceEEEecCCCCcccCch-HH------HHhhcccc-cccceeeecCCCccchhhChHHHHH
Confidence 000000000 112889999999999999999754 33 66777776 5 889999999999999999999
Q ss_pred HHHHHHHhC
Q 021158 308 HIYEFIKKF 316 (316)
Q Consensus 308 ~i~~fl~~~ 316 (316)
.|.+||+++
T Consensus 293 ~l~~fl~~~ 301 (302)
T PRK00870 293 AVLEFIRAT 301 (302)
T ss_pred HHHHHHhcC
Confidence 999999875
No 6
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=100.00 E-value=6.6e-37 Score=239.68 Aligned_cols=258 Identities=19% Similarity=0.213 Sum_probs=170.6
Q ss_pred eeEEEeCCeeEEEEEe--CCC-CeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHH
Q 021158 6 HTTVATNGINMHVASI--GTG-PAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGD 82 (316)
Q Consensus 6 ~~~~~~~g~~l~~~~~--g~~-p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~ 82 (316)
.++++++|.+++|... +++ ++|||+||++++...|.++++.|.+. |+|+++|+||||.|+.+. ..+++++++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~plvllHG~~~~~~~w~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~--~~~~~~~~~~~ 80 (276)
T TIGR02240 4 FRTIDLDGQSIRTAVRPGKEGLTPLLIFNGIGANLELVFPFIEALDPD-LEVIAFDVPGVGGSSTPR--HPYRFPGLAKL 80 (276)
T ss_pred EEEeccCCcEEEEEEecCCCCCCcEEEEeCCCcchHHHHHHHHHhccC-ceEEEECCCCCCCCCCCC--CcCcHHHHHHH
Confidence 4667889999999875 334 79999999999999999999999875 999999999999998654 46789999999
Q ss_pred HHHHHHHhCCcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCCCCCCccccchhhhhhccccchhhccCCcchHH
Q 021158 83 LIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQEPGEIEE 162 (316)
Q Consensus 83 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (316)
+.+++++++.++++|+||||||.+++.+|.++|++|+++|+++++.......... ...... ..+ ..
T Consensus 81 ~~~~i~~l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~--~~~~~~---------~~~---~~ 146 (276)
T TIGR02240 81 AARMLDYLDYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKP--KVLMMM---------ASP---RR 146 (276)
T ss_pred HHHHHHHhCcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCch--hHHHHh---------cCc---hh
Confidence 9999999999999999999999999999999999999999999876431110000 000000 000 00
Q ss_pred HHhhhchHHHHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhccCCcCc-cccccccccccccccc
Q 021158 163 EFAQIDTARLMKKFLCLRIPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFNQKGFTG-PVNYYRCWDLNWELMA 241 (316)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 241 (316)
.............++..... ...+....+........... ..............
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 201 (276)
T TIGR02240 147 YIQPSHGIHIAPDIYGGAFR-----------------------RDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIH-- 201 (276)
T ss_pred hhccccccchhhhhccceee-----------------------ccchhhhhhhhhcccCCCchHHHHHHHHcCCchhh--
Confidence 00000000000000000000 00000000000000000000 00000000000000
Q ss_pred CCCCccccCcEEEEEeCCCcccCCCCcchhcccccccccccCcccEEEEcCCCcccchhhHHHHHHHHHHHHHh
Q 021158 242 PWTGVQIKVPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQEKAEEVGAHIYEFIKK 315 (316)
Q Consensus 242 ~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 315 (316)
.+.++++|+|+|+|++|.++|++..+. +.+..+++ +++++++ ||+++.|+|+++++.|.+|+++
T Consensus 202 --~l~~i~~P~lii~G~~D~~v~~~~~~~------l~~~~~~~-~~~~i~~-gH~~~~e~p~~~~~~i~~fl~~ 265 (276)
T TIGR02240 202 --WLHKIQQPTLVLAGDDDPIIPLINMRL------LAWRIPNA-ELHIIDD-GHLFLITRAEAVAPIIMKFLAE 265 (276)
T ss_pred --HhhcCCCCEEEEEeCCCCcCCHHHHHH------HHHhCCCC-EEEEEcC-CCchhhccHHHHHHHHHHHHHH
Confidence 112889999999999999999887654 66778998 9999986 9999999999999999999976
No 7
>PRK03204 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=5.7e-37 Score=240.21 Aligned_cols=267 Identities=21% Similarity=0.312 Sum_probs=172.7
Q ss_pred CceeEEEeCCeeEEEEEeCCCCeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHH
Q 021158 4 IEHTTVATNGINMHVASIGTGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDL 83 (316)
Q Consensus 4 ~~~~~~~~~g~~l~~~~~g~~p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~ 83 (316)
++.++++++|.+++|...|++|+|||+||++.+...|..+++.|.+. |+|+++|+||||.|+.+.. ..++.+++++++
T Consensus 14 ~~~~~~~~~~~~i~y~~~G~~~~iv~lHG~~~~~~~~~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~~ 91 (286)
T PRK03204 14 FESRWFDSSRGRIHYIDEGTGPPILLCHGNPTWSFLYRDIIVALRDR-FRCVAPDYLGFGLSERPSG-FGYQIDEHARVI 91 (286)
T ss_pred ccceEEEcCCcEEEEEECCCCCEEEEECCCCccHHHHHHHHHHHhCC-cEEEEECCCCCCCCCCCCc-cccCHHHHHHHH
Confidence 56788999999999999999999999999999999999999999875 9999999999999987542 357889999999
Q ss_pred HHHHHHhCCcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCCCCCCccccchhhhhhccccchhhccCCcchHHH
Q 021158 84 IGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQEPGEIEEE 163 (316)
Q Consensus 84 ~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (316)
.+++++++.++++++||||||.+++.++..+|++|+++|+++++....... ....+... +.........
T Consensus 92 ~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~--~~~~~~~~---------~~~~~~~~~~ 160 (286)
T PRK03204 92 GEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTL--AMKAFSRV---------MSSPPVQYAI 160 (286)
T ss_pred HHHHHHhCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCch--hHHHHHHH---------hccccchhhh
Confidence 999999999999999999999999999999999999999887654221100 00000000 0000000000
Q ss_pred HhhhchHHHHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhccCCcCcccc----ccccccc-ccc
Q 021158 164 FAQIDTARLMKKFLCLRIPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFNQKGFTGPVN----YYRCWDL-NWE 238 (316)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~~ 238 (316)
. ....+...++..... ...+++....+.............. .+..... ...
T Consensus 161 ~---~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (286)
T PRK03204 161 L---RRNFFVERLIPAGTE---------------------HRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLAR 216 (286)
T ss_pred h---hhhHHHHHhcccccc---------------------CCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHH
Confidence 0 000111111111000 0011111111111100000000000 0000000 000
Q ss_pred cccCCCCccccCcEEEEEeCCCcccCCCCcchhcccccccccccCcccEEEEcCCCcccchhhHHHHHHHHHHHH
Q 021158 239 LMAPWTGVQIKVPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQEKAEEVGAHIYEFI 313 (316)
Q Consensus 239 ~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 313 (316)
.........+++|+++|+|++|.++++.... +.+++..|+. ++++++++||++++|+|+++++.|.+|+
T Consensus 217 ~~~~~~~~~~~~PtliI~G~~D~~~~~~~~~-----~~~~~~ip~~-~~~~i~~aGH~~~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 217 LAREVPATLGTKPTLLVWGMKDVAFRPKTIL-----PRLRATFPDH-VLVELPNAKHFIQEDAPDRIAAAIIERF 285 (286)
T ss_pred hhhhhhhhcCCCCeEEEecCCCcccCcHHHH-----HHHHHhcCCC-eEEEcCCCcccccccCHHHHHHHHHHhc
Confidence 0000000023899999999999998765322 2267889999 9999999999999999999999999997
No 8
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=100.00 E-value=2.2e-35 Score=232.49 Aligned_cols=269 Identities=21% Similarity=0.269 Sum_probs=165.2
Q ss_pred CceeEEEeC-----CeeEEEEEeCCCCeEEEEccCCCchhhhHHh---hhhhhcCCceEEccCCCCCCCCCCCCCCcchh
Q 021158 4 IEHTTVATN-----GINMHVASIGTGPAVLFIHGFPELWYSWRNQ---LLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYT 75 (316)
Q Consensus 4 ~~~~~~~~~-----g~~l~~~~~g~~p~il~~HG~~~~~~~~~~~---~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~ 75 (316)
+..+++.++ |.+++|...|++|+|||+||++++...|..+ +..|.+.||+|+++|+||||.|+........+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~y~~~g~~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~ 84 (282)
T TIGR03343 5 STSKFVKINEKGLSNFRIHYNEAGNGEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRG 84 (282)
T ss_pred CcceEEEcccccccceeEEEEecCCCCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCccccc
Confidence 444555554 5779999999999999999999888777643 45566678999999999999998653211222
Q ss_pred HHHHHHHHHHHHHHhCCcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCCCCCC-ccccchhhhhhccccchhhc
Q 021158 76 ALHLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPA-VRPLNNFRAVYGDDYYICRF 154 (316)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 154 (316)
...++++.++++.++.++++++||||||.+++.+|.++|++++++|+++++....... .......... ...+
T Consensus 85 -~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~------~~~~ 157 (282)
T TIGR03343 85 -LVNARAVKGLMDALDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLL------FKLY 157 (282)
T ss_pred -chhHHHHHHHHHHcCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHH------HHHh
Confidence 2568899999999999999999999999999999999999999999998754321100 0000000000 0000
Q ss_pred cCCcchHHHHhhhchHHHHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhccCCcCcccccccccc
Q 021158 155 QEPGEIEEEFAQIDTARLMKKFLCLRIPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFNQKGFTGPVNYYRCWD 234 (316)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (316)
..+ .......++..................... ..........+....... .+...+
T Consensus 158 ~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~-------~~~~~~ 214 (282)
T TIGR03343 158 AEP-----------SYETLKQMLNVFLFDQSLITEELLQGRWEN-----IQRQPEHLKNFLISSQKA-------PLSTWD 214 (282)
T ss_pred cCC-----------CHHHHHHHHhhCccCcccCcHHHHHhHHHH-----hhcCHHHHHHHHHhcccc-------ccccch
Confidence 000 000111111100000000000000000000 000000111111000000 000000
Q ss_pred cccccccCCCCccccCcEEEEEeCCCcccCCCCcchhcccccccccccCcccEEEEcCCCcccchhhHHHHHHHHHHHHH
Q 021158 235 LNWELMAPWTGVQIKVPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQEKAEEVGAHIYEFIK 314 (316)
Q Consensus 235 ~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 314 (316)
... .+.++++|+|+++|++|.++|++..+. +++..|++ ++++++++||+++.|+|+++.+.|.+||+
T Consensus 215 ~~~------~l~~i~~Pvlli~G~~D~~v~~~~~~~------~~~~~~~~-~~~~i~~agH~~~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 215 VTA------RLGEIKAKTLVTWGRDDRFVPLDHGLK------LLWNMPDA-QLHVFSRCGHWAQWEHADAFNRLVIDFLR 281 (282)
T ss_pred HHH------HHhhCCCCEEEEEccCCCcCCchhHHH------HHHhCCCC-EEEEeCCCCcCCcccCHHHHHHHHHHHhh
Confidence 000 112899999999999999999876654 66788999 99999999999999999999999999996
Q ss_pred h
Q 021158 315 K 315 (316)
Q Consensus 315 ~ 315 (316)
.
T Consensus 282 ~ 282 (282)
T TIGR03343 282 N 282 (282)
T ss_pred C
Confidence 3
No 9
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=100.00 E-value=2e-35 Score=240.92 Aligned_cols=282 Identities=18% Similarity=0.233 Sum_probs=170.1
Q ss_pred CceeEEEeCCeeEEEEEeCC-----CCeEEEEccCCCchhhhHH-hhhhhh---cCCceEEccCCCCCCCCCCCCCCcch
Q 021158 4 IEHTTVATNGINMHVASIGT-----GPAVLFIHGFPELWYSWRN-QLLYLS---SRGYRAIAPDLRGYGDTDAPPSVTSY 74 (316)
Q Consensus 4 ~~~~~~~~~g~~l~~~~~g~-----~p~il~~HG~~~~~~~~~~-~~~~l~---~~g~~v~~~D~~G~G~s~~~~~~~~~ 74 (316)
....+.+.+|.+++|...++ +|+|||+||++++...|.. +++.|. +.+|+|+++|+||||.|+.+.. ..+
T Consensus 176 ~~~~~~~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~-~~y 254 (481)
T PLN03087 176 FCTSWLSSSNESLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPAD-SLY 254 (481)
T ss_pred eeeeeEeeCCeEEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCC-CcC
Confidence 34566778899999999885 3799999999999999985 446655 3579999999999999986642 458
Q ss_pred hHHHHHHHHH-HHHHHhCCcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCCCCCCccccchhh-hhhccccchh
Q 021158 75 TALHLVGDLI-GLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFR-AVYGDDYYIC 152 (316)
Q Consensus 75 ~~~~~~~~~~-~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 152 (316)
+++++++++. .+++.++.++++++||||||.+++.+|.++|++|+++|+++++............... ........ .
T Consensus 255 tl~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 333 (481)
T PLN03087 255 TLREHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQATQYVMRKVAPRRVW-P 333 (481)
T ss_pred CHHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhHHHHHHHHhcccccC-C
Confidence 8999999994 8999999999999999999999999999999999999999986543221110000000 00000000 0
Q ss_pred hccCCcchHHHHhhhch---------HHHHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhccCCc
Q 021158 153 RFQEPGEIEEEFAQIDT---------ARLMKKFLCLRIPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFNQKGF 223 (316)
Q Consensus 153 ~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (316)
...........+..... ...+..+...... ..........+........+
T Consensus 334 ~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~---------------------~~~~~~l~~~~~~~~~~~~~ 392 (481)
T PLN03087 334 PIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTR---------------------NRMRTFLIEGFFCHTHNAAW 392 (481)
T ss_pred ccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhh---------------------hhhhHHHHHHHHhccchhhH
Confidence 00000000000000000 0000000000000 00000000000000000000
Q ss_pred CcccccccccccccccccCCCCccccCcEEEEEeCCCcccCCCCcchhcccccccccccCcccEEEEcCCCcccch-hhH
Q 021158 224 TGPVNYYRCWDLNWELMAPWTGVQIKVPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQ-EKA 302 (316)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~ 302 (316)
.......................++++|+|+|+|++|.++|++..+. +++.+|++ ++++++++||++++ ++|
T Consensus 393 ~~l~~~i~~~~~~l~~~l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~------la~~iP~a-~l~vI~~aGH~~~v~e~p 465 (481)
T PLN03087 393 HTLHNIICGSGSKLDGYLDHVRDQLKCDVAIFHGGDDELIPVECSYA------VKAKVPRA-RVKVIDDKDHITIVVGRQ 465 (481)
T ss_pred HHHHHHHhchhhhhhhHHHHHHHhCCCCEEEEEECCCCCCCHHHHHH------HHHhCCCC-EEEEeCCCCCcchhhcCH
Confidence 00000000000000000000001689999999999999999887654 67889999 99999999999886 999
Q ss_pred HHHHHHHHHHHHh
Q 021158 303 EEVGAHIYEFIKK 315 (316)
Q Consensus 303 ~~~~~~i~~fl~~ 315 (316)
+++++.|.+|++.
T Consensus 466 ~~fa~~L~~F~~~ 478 (481)
T PLN03087 466 KEFARELEEIWRR 478 (481)
T ss_pred HHHHHHHHHHhhc
Confidence 9999999999864
No 10
>PLN02578 hydrolase
Probab=100.00 E-value=7.1e-35 Score=234.98 Aligned_cols=278 Identities=16% Similarity=0.190 Sum_probs=172.3
Q ss_pred eEEEeCCeeEEEEEeCCCCeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHH
Q 021158 7 TTVATNGINMHVASIGTGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGL 86 (316)
Q Consensus 7 ~~~~~~g~~l~~~~~g~~p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~ 86 (316)
.+++.+|.+++|...|++|+||++||++++...|..+++.|.+. |+|+++|+||||.|+.+. ..++...+++++.++
T Consensus 69 ~~~~~~~~~i~Y~~~g~g~~vvliHG~~~~~~~w~~~~~~l~~~-~~v~~~D~~G~G~S~~~~--~~~~~~~~a~~l~~~ 145 (354)
T PLN02578 69 NFWTWRGHKIHYVVQGEGLPIVLIHGFGASAFHWRYNIPELAKK-YKVYALDLLGFGWSDKAL--IEYDAMVWRDQVADF 145 (354)
T ss_pred eEEEECCEEEEEEEcCCCCeEEEECCCCCCHHHHHHHHHHHhcC-CEEEEECCCCCCCCCCcc--cccCHHHHHHHHHHH
Confidence 45677899999999999999999999999999999999999875 999999999999998775 578899999999999
Q ss_pred HHHhCCcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCCCCCCccccchh--hhhhccccchhhccC---CcchH
Q 021158 87 LDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNF--RAVYGDDYYICRFQE---PGEIE 161 (316)
Q Consensus 87 ~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~---~~~~~ 161 (316)
++.++.++++++|||+||.+++.+|.++|++++++|+++++.............. ............... .....
T Consensus 146 i~~~~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (354)
T PLN02578 146 VKEVVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVVLG 225 (354)
T ss_pred HHHhccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHHHHHHHHHHHH
Confidence 9999989999999999999999999999999999999987654221110000000 000000000000000 00000
Q ss_pred HHHhhhchHHHHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhc-cCCcCcccccccccc-ccccc
Q 021158 162 EEFAQIDTARLMKKFLCLRIPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFN-QKGFTGPVNYYRCWD-LNWEL 239 (316)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~ 239 (316)
..+........+...+...... .....+.....+..... ..........+.... .....
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (354)
T PLN02578 226 FLFWQAKQPSRIESVLKSVYKD-------------------KSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRY 286 (354)
T ss_pred HHHHHhcCHHHHHHHHHHhcCC-------------------cccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCC
Confidence 0000000001111111110000 00011111111110000 000000000000000 00000
Q ss_pred ccCCCCccccCcEEEEEeCCCcccCCCCcchhcccccccccccCcccEEEEcCCCcccchhhHHHHHHHHHHHHH
Q 021158 240 MAPWTGVQIKVPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQEKAEEVGAHIYEFIK 314 (316)
Q Consensus 240 ~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 314 (316)
.....+.++++|+++|+|++|.++|.+.... +++..|+. +++++ ++||+++.|+|+++++.|.+|++
T Consensus 287 ~~~~~l~~i~~PvLiI~G~~D~~v~~~~~~~------l~~~~p~a-~l~~i-~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 287 TLDSLLSKLSCPLLLLWGDLDPWVGPAKAEK------IKAFYPDT-TLVNL-QAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred CHHHHhhcCCCCEEEEEeCCCCCCCHHHHHH------HHHhCCCC-EEEEe-CCCCCccccCHHHHHHHHHHHHh
Confidence 0001112889999999999999998876544 67778998 99999 57999999999999999999996
No 11
>PLN02965 Probable pheophorbidase
Probab=100.00 E-value=3.9e-35 Score=226.88 Aligned_cols=245 Identities=16% Similarity=0.184 Sum_probs=156.6
Q ss_pred eEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCC-cceEEEEecHHH
Q 021158 26 AVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGI-HQVFLVGHDWGA 104 (316)
Q Consensus 26 ~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~G~S~Gg 104 (316)
.|||+||++.+...|..+++.|.+.||+|+++|+||||.|+.... ..++.+++++|+.++++.++. ++++++||||||
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~-~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG 83 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSN-TVSSSDQYNRPLFALLSDLPPDHKVILVGHSIGG 83 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCcc-ccCCHHHHHHHHHHHHHhcCCCCCEEEEecCcch
Confidence 599999999999999999999987789999999999999976542 357899999999999999987 499999999999
Q ss_pred HHHHHHHhhchhHHhhhhhccCCCCCCCCCccccchhhhhhccccchhhc--cCCcchHHHHhhhchHHHHHHhhhccCC
Q 021158 105 LIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRF--QEPGEIEEEFAQIDTARLMKKFLCLRIP 182 (316)
Q Consensus 105 ~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (316)
.+++.++.++|++|+++|++++........ .................. ........ ........+....+...
T Consensus 84 ~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-- 158 (255)
T PLN02965 84 GSVTEALCKFTDKISMAIYVAAAMVKPGSI--ISPRLKNVMEGTEKIWDYTFGEGPDKPP-TGIMMKPEFVRHYYYNQ-- 158 (255)
T ss_pred HHHHHHHHhCchheeEEEEEccccCCCCCC--ccHHHHhhhhccccceeeeeccCCCCCc-chhhcCHHHHHHHHhcC--
Confidence 999999999999999999999864321110 000000000000000000 00000000 00000000000000000
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhccCCcCcccccccccccccccccCCCCccccCcEEEEEeCCCcc
Q 021158 183 KPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFNQKGFTGPVNYYRCWDLNWELMAPWTGVQIKVPVKYIVGDQDLV 262 (316)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~ 262 (316)
...+................ +.... ... ..+..+++|+++|+|++|.+
T Consensus 159 -----------------------~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~----~~~~~i~vP~lvi~g~~D~~ 206 (255)
T PLN02965 159 -----------------------SPLEDYTLSSKLLRPAPVRA----FQDLD-KLP----PNPEAEKVPRVYIKTAKDNL 206 (255)
T ss_pred -----------------------CCHHHHHHHHHhcCCCCCcc----hhhhh-hcc----chhhcCCCCEEEEEcCCCCC
Confidence 00010111111111111110 00000 000 01127899999999999999
Q ss_pred cCCCCcchhcccccccccccCcccEEEEcCCCcccchhhHHHHHHHHHHHHHh
Q 021158 263 YNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQEKAEEVGAHIYEFIKK 315 (316)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 315 (316)
+|++..+. +++..+++ ++++++++||++++|+|++|++.|.+|+++
T Consensus 207 ~~~~~~~~------~~~~~~~a-~~~~i~~~GH~~~~e~p~~v~~~l~~~~~~ 252 (255)
T PLN02965 207 FDPVRQDV------MVENWPPA-QTYVLEDSDHSAFFSVPTTLFQYLLQAVSS 252 (255)
T ss_pred CCHHHHHH------HHHhCCcc-eEEEecCCCCchhhcCHHHHHHHHHHHHHH
Confidence 99876544 78899999 999999999999999999999999999875
No 12
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=100.00 E-value=1.7e-34 Score=227.26 Aligned_cols=266 Identities=24% Similarity=0.353 Sum_probs=173.3
Q ss_pred eeEEEeCCeeEEEEEeCC--CCeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHH
Q 021158 6 HTTVATNGINMHVASIGT--GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDL 83 (316)
Q Consensus 6 ~~~~~~~g~~l~~~~~g~--~p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~ 83 (316)
.++++++|.+++|.+.|+ +|+|||+||++++...|..+++.|.+. |+|+++|+||||.|+.+.. ..++++++++++
T Consensus 8 ~~~~~~~~~~~~~~~~g~~~~~~vv~~hG~~~~~~~~~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~l 85 (278)
T TIGR03056 8 SRRVTVGPFHWHVQDMGPTAGPLLLLLHGTGASTHSWRDLMPPLARS-FRVVAPDLPGHGFTRAPFR-FRFTLPSMAEDL 85 (278)
T ss_pred cceeeECCEEEEEEecCCCCCCeEEEEcCCCCCHHHHHHHHHHHhhC-cEEEeecCCCCCCCCCccc-cCCCHHHHHHHH
Confidence 567889999999999986 789999999999999999999999874 9999999999999987653 367999999999
Q ss_pred HHHHHHhCCcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCCCCCCcc-ccchhhhhhccccchhhccCCcchHH
Q 021158 84 IGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVR-PLNNFRAVYGDDYYICRFQEPGEIEE 162 (316)
Q Consensus 84 ~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (316)
.+++++++.++++++||||||.+++.+|.++|++++++|++++.......... ....+.... ...+. ...
T Consensus 86 ~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~-~~~ 156 (278)
T TIGR03056 86 SALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVL--------ACNPF-TPP 156 (278)
T ss_pred HHHHHHcCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhh--------hhccc-chH
Confidence 99999999899999999999999999999999999999999876542111000 000000000 00000 000
Q ss_pred HHhh-hchHHHHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhccC-CcCcccccccccccccccc
Q 021158 163 EFAQ-IDTARLMKKFLCLRIPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFNQK-GFTGPVNYYRCWDLNWELM 240 (316)
Q Consensus 163 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 240 (316)
.... ......+..++.... ..+.......+....... ................
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 211 (278)
T TIGR03056 157 MMSRGAADQQRVERLIRDTG----------------------SLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAP--- 211 (278)
T ss_pred HHHhhcccCcchhHHhhccc----------------------cccccchhhHHHHhhcCchhhhHHHHHhhcccccc---
Confidence 0000 000000000100000 000011111111111000 0000000011100000
Q ss_pred cCCCCccccCcEEEEEeCCCcccCCCCcchhcccccccccccCcccEEEEcCCCcccchhhHHHHHHHHHHHHH
Q 021158 241 APWTGVQIKVPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQEKAEEVGAHIYEFIK 314 (316)
Q Consensus 241 ~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 314 (316)
......++++|+++|+|++|.++|++..+. +.+..++. +++.++++||+++.|+|+++++.|.+|++
T Consensus 212 ~~~~~~~i~~P~lii~g~~D~~vp~~~~~~------~~~~~~~~-~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 212 LNRDLPRITIPLHLIAGEEDKAVPPDESKR------AATRVPTA-TLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred hhhhcccCCCCEEEEEeCCCcccCHHHHHH------HHHhccCC-eEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 000112789999999999999999876544 56778888 99999999999999999999999999984
No 13
>PRK10349 carboxylesterase BioH; Provisional
Probab=100.00 E-value=7.8e-35 Score=225.79 Aligned_cols=246 Identities=17% Similarity=0.213 Sum_probs=155.8
Q ss_pred eEEEEEeCCCC-eEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCc
Q 021158 15 NMHVASIGTGP-AVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIH 93 (316)
Q Consensus 15 ~l~~~~~g~~p-~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (316)
.++|...|+++ +|||+||++++...|..+++.|.++ |+|+++|+||||.|+... .++.+++++++.+ ++.+
T Consensus 3 ~~~y~~~G~g~~~ivllHG~~~~~~~w~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~---~~~~~~~~~~l~~----~~~~ 74 (256)
T PRK10349 3 NIWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELSSH-FTLHLVDLPGFGRSRGFG---ALSLADMAEAVLQ----QAPD 74 (256)
T ss_pred ccchhhcCCCCCeEEEECCCCCChhHHHHHHHHHhcC-CEEEEecCCCCCCCCCCC---CCCHHHHHHHHHh----cCCC
Confidence 37788889885 6999999999999999999999886 999999999999997543 4677777766553 5668
Q ss_pred ceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCCCCCCccccchhhhhhccccchhhccCCcchHHHHhhhchHHHH
Q 021158 94 QVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQEPGEIEEEFAQIDTARLM 173 (316)
Q Consensus 94 ~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (316)
+++++||||||.+|+.+|.++|++|+++|+++++........ ......... ..+ ...+. .......
T Consensus 75 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~--~~~~~~~~~-----~~~------~~~~~-~~~~~~~ 140 (256)
T PRK10349 75 KAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDE--WPGIKPDVL-----AGF------QQQLS-DDFQRTV 140 (256)
T ss_pred CeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCC--CCcccHHHH-----HHH------HHHHH-hchHHHH
Confidence 999999999999999999999999999999987543211100 000000000 000 00000 0001111
Q ss_pred HHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhccCCcCc------ccccccccccccccccCCCCcc
Q 021158 174 KKFLCLRIPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFNQKGFTG------PVNYYRCWDLNWELMAPWTGVQ 247 (316)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 247 (316)
..++........ ........+........... ....+...+.... +.+
T Consensus 141 ~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------l~~ 194 (256)
T PRK10349 141 ERFLALQTMGTE--------------------TARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQP------LQN 194 (256)
T ss_pred HHHHHHHHccCc--------------------hHHHHHHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHH------Hhh
Confidence 222111000000 00000111111000000000 0000111111111 128
Q ss_pred ccCcEEEEEeCCCcccCCCCcchhcccccccccccCcccEEEEcCCCcccchhhHHHHHHHHHHHHHh
Q 021158 248 IKVPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQEKAEEVGAHIYEFIKK 315 (316)
Q Consensus 248 i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 315 (316)
+++|+|+|+|++|.++|.+..+. +++..+++ ++++++++||++++|+|++|++.+.+|-++
T Consensus 195 i~~P~lii~G~~D~~~~~~~~~~------~~~~i~~~-~~~~i~~~gH~~~~e~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 195 VSMPFLRLYGYLDGLVPRKVVPM------LDKLWPHS-ESYIFAKAAHAPFISHPAEFCHLLVALKQR 255 (256)
T ss_pred cCCCeEEEecCCCccCCHHHHHH------HHHhCCCC-eEEEeCCCCCCccccCHHHHHHHHHHHhcc
Confidence 89999999999999998876543 67888999 999999999999999999999999998654
No 14
>PRK06489 hypothetical protein; Provisional
Probab=100.00 E-value=2.5e-34 Score=232.53 Aligned_cols=119 Identities=26% Similarity=0.377 Sum_probs=99.3
Q ss_pred EeCCeeEEEEEeCC---------CCeEEEEccCCCchhhhH--Hhhhhh-------hcCCceEEccCCCCCCCCCCCCCC
Q 021158 10 ATNGINMHVASIGT---------GPAVLFIHGFPELWYSWR--NQLLYL-------SSRGYRAIAPDLRGYGDTDAPPSV 71 (316)
Q Consensus 10 ~~~g~~l~~~~~g~---------~p~il~~HG~~~~~~~~~--~~~~~l-------~~~g~~v~~~D~~G~G~s~~~~~~ 71 (316)
+++|.+++|.+.|+ +|+|||+||++++...|. .+.+.| ...+|+|+++|+||||.|+.+.+.
T Consensus 46 ~~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~ 125 (360)
T PRK06489 46 TLPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDG 125 (360)
T ss_pred CcCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcC
Confidence 36789999999986 789999999999988875 444443 234699999999999999865421
Q ss_pred -----cchhHHHHHHHHHHHH-HHhCCcceE-EEEecHHHHHHHHHHhhchhHHhhhhhccCCC
Q 021158 72 -----TSYTALHLVGDLIGLL-DKLGIHQVF-LVGHDWGALIAWYFCLFRPDRVKALVNMSVPF 128 (316)
Q Consensus 72 -----~~~~~~~~~~~~~~~~-~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~ 128 (316)
..++++++++++.+++ +++++++++ ++||||||++|+.+|.++|++|+++|++++..
T Consensus 126 ~~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~ 189 (360)
T PRK06489 126 LRAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQP 189 (360)
T ss_pred CCCCCCcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCc
Confidence 1478999999988855 889998885 89999999999999999999999999998754
No 15
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=100.00 E-value=5.5e-34 Score=229.88 Aligned_cols=261 Identities=17% Similarity=0.195 Sum_probs=162.7
Q ss_pred eEEEeCCeeEEEEEeCC-----CCeEEEEccCCCchhh-hHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHH
Q 021158 7 TTVATNGINMHVASIGT-----GPAVLFIHGFPELWYS-WRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLV 80 (316)
Q Consensus 7 ~~~~~~g~~l~~~~~g~-----~p~il~~HG~~~~~~~-~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~ 80 (316)
.+++.+|.+|+|..+++ .++|||+||++++... |..+++.|+++||+|+++|+||||.|+.... ...++++++
T Consensus 65 ~~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~-~~~~~~~~~ 143 (349)
T PLN02385 65 YEVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHG-YIPSFDDLV 143 (349)
T ss_pred eEEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCC-CcCCHHHHH
Confidence 34556899999998763 4689999999988654 6889999998899999999999999986532 235789999
Q ss_pred HHHHHHHHHhCCc------ceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCCCCCCcc--ccchhhhhhccccchh
Q 021158 81 GDLIGLLDKLGIH------QVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVR--PLNNFRAVYGDDYYIC 152 (316)
Q Consensus 81 ~~~~~~~~~~~~~------~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 152 (316)
+|+.++++.++.+ +++|+||||||++++.++.++|++++++|+++|.......... ....+...........
T Consensus 144 ~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 223 (349)
T PLN02385 144 DDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLVLQILILLANLLPKA 223 (349)
T ss_pred HHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHHHHHHHHHHHHCCCc
Confidence 9999999887543 7999999999999999999999999999999986543211100 0000000000000000
Q ss_pred hccCCcchHHHHhhhchHHHHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhccCCcCcccccccc
Q 021158 153 RFQEPGEIEEEFAQIDTARLMKKFLCLRIPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFNQKGFTGPVNYYRC 232 (316)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (316)
.............. .. ............ . . ....+......+ +.
T Consensus 224 ~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~------------~------~---~~~~~~~~~~~l------------~~ 267 (349)
T PLN02385 224 KLVPQKDLAELAFR-DL--KKRKMAEYNVIA------------Y------K---DKPRLRTAVELL------------RT 267 (349)
T ss_pred eecCCCcccccccc-CH--HHHHHhhcCcce------------e------C---CCcchHHHHHHH------------HH
Confidence 00000000000000 00 000000000000 0 0 000000000000 00
Q ss_pred cccccccccCCCCccccCcEEEEEeCCCcccCCCCcchhcccccccccc--cCcccEEEEcCCCcccchhhHHH----HH
Q 021158 233 WDLNWELMAPWTGVQIKVPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYV--PYLQDVVVMEGVAHFINQEKAEE----VG 306 (316)
Q Consensus 233 ~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~----~~ 306 (316)
.. ..... +.++++|+|+|+|++|.++|++.++. +.+.. ++. ++++++++||+++.|+|++ +.
T Consensus 268 ~~-~~~~~----l~~i~~P~Lii~G~~D~vv~~~~~~~------l~~~~~~~~~-~l~~i~~~gH~l~~e~p~~~~~~v~ 335 (349)
T PLN02385 268 TQ-EIEMQ----LEEVSLPLLILHGEADKVTDPSVSKF------LYEKASSSDK-KLKLYEDAYHSILEGEPDEMIFQVL 335 (349)
T ss_pred HH-HHHHh----cccCCCCEEEEEeCCCCccChHHHHH------HHHHcCCCCc-eEEEeCCCeeecccCCChhhHHHHH
Confidence 00 00001 11889999999999999999887665 33443 566 9999999999999998876 88
Q ss_pred HHHHHHHHhC
Q 021158 307 AHIYEFIKKF 316 (316)
Q Consensus 307 ~~i~~fl~~~ 316 (316)
+.|.+||+++
T Consensus 336 ~~i~~wL~~~ 345 (349)
T PLN02385 336 DDIISWLDSH 345 (349)
T ss_pred HHHHHHHHHh
Confidence 8899999864
No 16
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=100.00 E-value=1.5e-33 Score=225.91 Aligned_cols=265 Identities=26% Similarity=0.365 Sum_probs=170.8
Q ss_pred eEEEeCCeeEEEEEeCC--CCeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCC--CcchhHHHHHHH
Q 021158 7 TTVATNGINMHVASIGT--GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPS--VTSYTALHLVGD 82 (316)
Q Consensus 7 ~~~~~~g~~l~~~~~g~--~p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~--~~~~~~~~~~~~ 82 (316)
..++.+|.+++|.+.|+ +|+|||+||++++...|..+++.|++ +|+|+++|+||||.|+.+.. ...++.++++++
T Consensus 108 ~~~~~~~~~~~y~~~G~~~~~~ivllHG~~~~~~~w~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~ 186 (383)
T PLN03084 108 SQASSDLFRWFCVESGSNNNPPVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSS 186 (383)
T ss_pred eEEcCCceEEEEEecCCCCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCcccccccCCHHHHHHH
Confidence 34567999999999985 68999999999999999999999987 59999999999999987653 135899999999
Q ss_pred HHHHHHHhCCcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCCCCCCccccchhhhhhccccchhhccCCcchHH
Q 021158 83 LIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQEPGEIEE 162 (316)
Q Consensus 83 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (316)
+.+++++++.++++|+|||+||.+++.+|.++|++|+++|+++++....... .......+.. .. ...
T Consensus 187 l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~---~p~~l~~~~~-~l---------~~~ 253 (383)
T PLN03084 187 LESLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAK---LPSTLSEFSN-FL---------LGE 253 (383)
T ss_pred HHHHHHHhCCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCcccccc---chHHHHHHHH-HH---------hhh
Confidence 9999999999999999999999999999999999999999999865321100 0000000000 00 000
Q ss_pred HHhhhchHHHHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhccCCcC-ccc-ccccccccc----
Q 021158 163 EFAQIDTARLMKKFLCLRIPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFNQKGFT-GPV-NYYRCWDLN---- 236 (316)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~---- 236 (316)
.+... ........+... . ...+.++....+...+...... ... ..++.+...
T Consensus 254 ~~~~~-~~~~~~~~~~~~--~-------------------~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~ 311 (383)
T PLN03084 254 IFSQD-PLRASDKALTSC--G-------------------PYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKY 311 (383)
T ss_pred hhhcc-hHHHHhhhhccc--C-------------------ccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchh
Confidence 00000 000000000000 0 0001112222222111110000 000 000000000
Q ss_pred -cccccCCCCccccCcEEEEEeCCCcccCCCCcchhcccccccccccCcccEEEEcCCCcccchhhHHHHHHHHHHHHHh
Q 021158 237 -WELMAPWTGVQIKVPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQEKAEEVGAHIYEFIKK 315 (316)
Q Consensus 237 -~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 315 (316)
..........++++|+++|+|++|.+++.+..+. +++. ++. ++++++++||+++.|+|+++++.|.+||++
T Consensus 312 ~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~~~~------~a~~-~~a-~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 312 IEEMRSILTDKNWKTPITVCWGLRDRWLNYDGVED------FCKS-SQH-KLIELPMAGHHVQEDCGEELGGIISGILSK 383 (383)
T ss_pred hHHHHhhhccccCCCCEEEEeeCCCCCcCHHHHHH------HHHh-cCC-eEEEECCCCCCcchhCHHHHHHHHHHHhhC
Confidence 0000000001689999999999999999876554 3444 477 999999999999999999999999999964
No 17
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=100.00 E-value=1.6e-33 Score=219.15 Aligned_cols=253 Identities=21% Similarity=0.311 Sum_probs=159.8
Q ss_pred EEEEEeCC----CCeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhC
Q 021158 16 MHVASIGT----GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLG 91 (316)
Q Consensus 16 l~~~~~g~----~p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (316)
++|...|+ +|+||++||++++...|..+++.|.+ +|+|+++|+||||.|..... ..++.+++++++.++++.++
T Consensus 1 ~~~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~~~~~i~~~~ 78 (257)
T TIGR03611 1 MHYELHGPPDADAPVVVLSSGLGGSGSYWAPQLDVLTQ-RFHVVTYDHRGTGRSPGELP-PGYSIAHMADDVLQLLDALN 78 (257)
T ss_pred CEEEEecCCCCCCCEEEEEcCCCcchhHHHHHHHHHHh-ccEEEEEcCCCCCCCCCCCc-ccCCHHHHHHHHHHHHHHhC
Confidence 35666663 68999999999999999999988876 59999999999999986532 56789999999999999999
Q ss_pred CcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCCCCCCccccchhhhhhccccchhhccCCcchHHHHhhhchHH
Q 021158 92 IHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQEPGEIEEEFAQIDTAR 171 (316)
Q Consensus 92 ~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (316)
.++++++||||||.+++.++.++|++++++|++++.................. ....................
T Consensus 79 ~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~- 151 (257)
T TIGR03611 79 IERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDVRIAL------LQHAGPEAYVHAQALFLYPA- 151 (257)
T ss_pred CCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHHHHHH------HhccCcchhhhhhhhhhccc-
Confidence 99999999999999999999999999999999987544311100000000000 00000000000000000000
Q ss_pred HHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhccCCcCcccccccccccccccccCCCCccccCc
Q 021158 172 LMKKFLCLRIPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFNQKGFTGPVNYYRCWDLNWELMAPWTGVQIKVP 251 (316)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P 251 (316)
.++...... ....... ................ .....+.. .. ..++++|
T Consensus 152 ---~~~~~~~~~---~~~~~~~-------~~~~~~~~~~~~~~~~------------~~~~~~~~--~~----~~~i~~P 200 (257)
T TIGR03611 152 ---DWISENAAR---LAADEAH-------ALAHFPGKANVLRRIN------------ALEAFDVS--AR----LDRIQHP 200 (257)
T ss_pred ---cHhhccchh---hhhhhhh-------cccccCccHHHHHHHH------------HHHcCCcH--HH----hcccCcc
Confidence 000000000 0000000 0000000000000000 00000000 11 1278999
Q ss_pred EEEEEeCCCcccCCCCcchhcccccccccccCcccEEEEcCCCcccchhhHHHHHHHHHHHHHh
Q 021158 252 VKYIVGDQDLVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQEKAEEVGAHIYEFIKK 315 (316)
Q Consensus 252 vl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 315 (316)
+++++|++|.++|++.... +.+..++. +++.++++||++++++|+++.+.|.+||++
T Consensus 201 ~l~i~g~~D~~~~~~~~~~------~~~~~~~~-~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 257 (257)
T TIGR03611 201 VLLIANRDDMLVPYTQSLR------LAAALPNA-QLKLLPYGGHASNVTDPETFNRALLDFLKT 257 (257)
T ss_pred EEEEecCcCcccCHHHHHH------HHHhcCCc-eEEEECCCCCCccccCHHHHHHHHHHHhcC
Confidence 9999999999999876654 55677888 999999999999999999999999999963
No 18
>PRK10673 acyl-CoA esterase; Provisional
Probab=100.00 E-value=1.8e-33 Score=218.38 Aligned_cols=236 Identities=17% Similarity=0.205 Sum_probs=155.9
Q ss_pred CCCeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCcceEEEEecH
Q 021158 23 TGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDW 102 (316)
Q Consensus 23 ~~p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 102 (316)
++|+|||+||++++...|..++..|.+. |+|+++|+||||.|.... .+++.++++|+.++++.++.++++++||||
T Consensus 15 ~~~~iv~lhG~~~~~~~~~~~~~~l~~~-~~vi~~D~~G~G~s~~~~---~~~~~~~~~d~~~~l~~l~~~~~~lvGhS~ 90 (255)
T PRK10673 15 NNSPIVLVHGLFGSLDNLGVLARDLVND-HDIIQVDMRNHGLSPRDP---VMNYPAMAQDLLDTLDALQIEKATFIGHSM 90 (255)
T ss_pred CCCCEEEECCCCCchhHHHHHHHHHhhC-CeEEEECCCCCCCCCCCC---CCCHHHHHHHHHHHHHHcCCCceEEEEECH
Confidence 3689999999999999999999999875 999999999999998654 578999999999999999999999999999
Q ss_pred HHHHHHHHHhhchhHHhhhhhccCCCCCCCCCccccchhhhhhccccchhhccCCcchHHHHhhhchHHHHHHhhhccCC
Q 021158 103 GALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQEPGEIEEEFAQIDTARLMKKFLCLRIP 182 (316)
Q Consensus 103 Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (316)
||.+++.+|.++|++|+++|++++.+...... ........... .... .. .........+...
T Consensus 91 Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~--~~~~~~~~~~~---~~~~-~~----------~~~~~~~~~~~~~-- 152 (255)
T PRK10673 91 GGKAVMALTALAPDRIDKLVAIDIAPVDYHVR--RHDEIFAAINA---VSEA-GA----------TTRQQAAAIMRQH-- 152 (255)
T ss_pred HHHHHHHHHHhCHhhcceEEEEecCCCCccch--hhHHHHHHHHH---hhhc-cc----------ccHHHHHHHHHHh--
Confidence 99999999999999999999997643221100 00000000000 0000 00 0000000000000
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHH-hhccCCcCc----ccccccccccccccccCCCCccccCcEEEEEe
Q 021158 183 KPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYAS-KFNQKGFTG----PVNYYRCWDLNWELMAPWTGVQIKVPVKYIVG 257 (316)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G 257 (316)
+.......+.. .+....+.. ....+...... . ...++++|+|+|+|
T Consensus 153 -----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~P~l~i~G 203 (255)
T PRK10673 153 -----------------------LNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGW--E----KIPAWPHPALFIRG 203 (255)
T ss_pred -----------------------cCCHHHHHHHHhcCCcceeEeeHHHHHHhHHHHhCC--c----ccCCCCCCeEEEEC
Confidence 00000000000 000000000 00000000000 0 11278999999999
Q ss_pred CCCcccCCCCcchhcccccccccccCcccEEEEcCCCcccchhhHHHHHHHHHHHHHhC
Q 021158 258 DQDLVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQEKAEEVGAHIYEFIKKF 316 (316)
Q Consensus 258 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 316 (316)
++|..++.+..+. +++..+++ ++++++++||++++++|+++++.|.+||++.
T Consensus 204 ~~D~~~~~~~~~~------~~~~~~~~-~~~~~~~~gH~~~~~~p~~~~~~l~~fl~~~ 255 (255)
T PRK10673 204 GNSPYVTEAYRDD------LLAQFPQA-RAHVIAGAGHWVHAEKPDAVLRAIRRYLNDK 255 (255)
T ss_pred CCCCCCCHHHHHH------HHHhCCCc-EEEEeCCCCCeeeccCHHHHHHHHHHHHhcC
Confidence 9999998776544 67888999 9999999999999999999999999999863
No 19
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=100.00 E-value=3.7e-33 Score=214.89 Aligned_cols=100 Identities=23% Similarity=0.232 Sum_probs=90.5
Q ss_pred CCeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCcceEEEEecHH
Q 021158 24 GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWG 103 (316)
Q Consensus 24 ~p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~G 103 (316)
+|+|||+||++++...|..+++.| + +|+|+++|+||||.|+.+. ..+++++++++.+++++++.++++++|||||
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l-~-~~~vi~~D~~G~G~S~~~~---~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~G 76 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEAL-P-DYPRLYIDLPGHGGSAAIS---VDGFADVSRLLSQTLQSYNILPYWLVGYSLG 76 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHc-C-CCCEEEecCCCCCCCCCcc---ccCHHHHHHHHHHHHHHcCCCCeEEEEECHH
Confidence 578999999999999999999988 3 5999999999999998764 3488999999999999999999999999999
Q ss_pred HHHHHHHHhhchhH-HhhhhhccCCC
Q 021158 104 ALIAWYFCLFRPDR-VKALVNMSVPF 128 (316)
Q Consensus 104 g~~a~~~a~~~p~~-v~~~il~~~~~ 128 (316)
|.+|+.+|.++|+. |+++|++++..
T Consensus 77 g~va~~~a~~~~~~~v~~lvl~~~~~ 102 (242)
T PRK11126 77 GRIAMYYACQGLAGGLCGLIVEGGNP 102 (242)
T ss_pred HHHHHHHHHhCCcccccEEEEeCCCC
Confidence 99999999999664 99999887654
No 20
>PRK10749 lysophospholipase L2; Provisional
Probab=100.00 E-value=1.9e-32 Score=218.94 Aligned_cols=125 Identities=18% Similarity=0.194 Sum_probs=108.3
Q ss_pred ceeEEEeCCeeEEEEEeCC---CCeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCC----CcchhHH
Q 021158 5 EHTTVATNGINMHVASIGT---GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPS----VTSYTAL 77 (316)
Q Consensus 5 ~~~~~~~~g~~l~~~~~g~---~p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~----~~~~~~~ 77 (316)
+.+++..+|.+++|..+++ +++||++||++.+...|..++..|.++||+|+++|+||||.|+.... ....+++
T Consensus 32 ~~~~~~~~g~~l~~~~~~~~~~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~ 111 (330)
T PRK10749 32 EAEFTGVDDIPIRFVRFRAPHHDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFN 111 (330)
T ss_pred ceEEEcCCCCEEEEEEccCCCCCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHH
Confidence 4566778999999999763 57999999999999999999999988999999999999999976432 1235789
Q ss_pred HHHHHHHHHHHHh----CCcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCC
Q 021158 78 HLVGDLIGLLDKL----GIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFP 129 (316)
Q Consensus 78 ~~~~~~~~~~~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 129 (316)
++++|+..+++.+ +..+++++||||||.+++.++.++|++++++|+++|...
T Consensus 112 ~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~ 167 (330)
T PRK10749 112 DYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFG 167 (330)
T ss_pred HHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhc
Confidence 9999999999887 567899999999999999999999999999999987653
No 21
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=100.00 E-value=1.5e-32 Score=212.95 Aligned_cols=247 Identities=24% Similarity=0.360 Sum_probs=161.8
Q ss_pred eEEEEEeCC---CCeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhC
Q 021158 15 NMHVASIGT---GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLG 91 (316)
Q Consensus 15 ~l~~~~~g~---~p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (316)
+++|...|+ +|+||++||++.+...|.++++.|.+ ||+|+++|+||||.|+... ..+++.++++++.++++.++
T Consensus 1 ~~~~~~~g~~~~~~~li~~hg~~~~~~~~~~~~~~l~~-~~~v~~~d~~G~G~s~~~~--~~~~~~~~~~~~~~~i~~~~ 77 (251)
T TIGR02427 1 RLHYRLDGAADGAPVLVFINSLGTDLRMWDPVLPALTP-DFRVLRYDKRGHGLSDAPE--GPYSIEDLADDVLALLDHLG 77 (251)
T ss_pred CceEEeecCCCCCCeEEEEcCcccchhhHHHHHHHhhc-ccEEEEecCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHhC
Confidence 357777774 47899999999999999999998875 6999999999999997654 46789999999999999999
Q ss_pred CcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCCCCCCccccchhhhhhccccchhhccCCcchHHHHhhhchHH
Q 021158 92 IHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQEPGEIEEEFAQIDTAR 171 (316)
Q Consensus 92 ~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (316)
.++++++|||+||++++.+|.++|++++++|+++++....... ...... ...... ..... ...
T Consensus 78 ~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~-----~~~~~~------~~~~~~-~~~~~-----~~~ 140 (251)
T TIGR02427 78 IERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPE-----SWNARI------AAVRAE-GLAAL-----ADA 140 (251)
T ss_pred CCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchh-----hHHHHH------hhhhhc-cHHHH-----HHH
Confidence 8999999999999999999999999999999998754321110 000000 000000 00000 000
Q ss_pred HHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhccCCcCccccccccccc-ccccccCCCCccccC
Q 021158 172 LMKKFLCLRIPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFNQKGFTGPVNYYRCWDL-NWELMAPWTGVQIKV 250 (316)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~ 250 (316)
.+..++...... ........+...+................. ..... ..++++
T Consensus 141 ~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 194 (251)
T TIGR02427 141 VLERWFTPGFRE----------------------AHPARLDLYRNMLVRQPPDGYAGCCAAIRDADFRDR----LGAIAV 194 (251)
T ss_pred HHHHHccccccc----------------------CChHHHHHHHHHHHhcCHHHHHHHHHHHhcccHHHH----hhhcCC
Confidence 111111100000 000111111111111100000000000000 00011 127899
Q ss_pred cEEEEEeCCCcccCCCCcchhcccccccccccCcccEEEEcCCCcccchhhHHHHHHHHHHHHH
Q 021158 251 PVKYIVGDQDLVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQEKAEEVGAHIYEFIK 314 (316)
Q Consensus 251 Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 314 (316)
|+++++|++|.++|.+..+. +.+..++. ++++++++||++++++|+++.+.|.+|++
T Consensus 195 Pvlii~g~~D~~~~~~~~~~------~~~~~~~~-~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 195 PTLCIAGDQDGSTPPELVRE------IADLVPGA-RFAEIRGAGHIPCVEQPEAFNAALRDFLR 251 (251)
T ss_pred CeEEEEeccCCcCChHHHHH------HHHhCCCc-eEEEECCCCCcccccChHHHHHHHHHHhC
Confidence 99999999999999886554 55667888 99999999999999999999999999984
No 22
>PRK07581 hypothetical protein; Validated
Probab=100.00 E-value=3.8e-33 Score=224.56 Aligned_cols=282 Identities=14% Similarity=0.154 Sum_probs=158.1
Q ss_pred EeCCeeEEEEEeCC----C-CeEEEEccCCCchhhhHHhh---hhhhcCCceEEccCCCCCCCCCCCCCC-cchhHH---
Q 021158 10 ATNGINMHVASIGT----G-PAVLFIHGFPELWYSWRNQL---LYLSSRGYRAIAPDLRGYGDTDAPPSV-TSYTAL--- 77 (316)
Q Consensus 10 ~~~g~~l~~~~~g~----~-p~il~~HG~~~~~~~~~~~~---~~l~~~g~~v~~~D~~G~G~s~~~~~~-~~~~~~--- 77 (316)
+++|.+++|...|+ + |+||++||++++...|..++ +.|...+|+|+++|+||||.|+.+... ..++.+
T Consensus 22 ~~~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 101 (339)
T PRK07581 22 TLPDARLAYKTYGTLNAAKDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFP 101 (339)
T ss_pred CcCCceEEEEecCccCCCCCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCC
Confidence 45688999999885 2 56777777777777776654 467656799999999999999865421 123332
Q ss_pred --HHHHHHHH----HHHHhCCcce-EEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCCCCCCccccchhhhhhcc-cc
Q 021158 78 --HLVGDLIG----LLDKLGIHQV-FLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGD-DY 149 (316)
Q Consensus 78 --~~~~~~~~----~~~~~~~~~~-~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~-~~ 149 (316)
.+++++.+ ++++++++++ +|+||||||++|+.+|.++|++|+++|++++..................+.. ..
T Consensus 102 ~~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~~~~ 181 (339)
T PRK07581 102 HVTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHNFVFLEGLKAALTADPA 181 (339)
T ss_pred ceeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHHHHHHHHHHHHHHhCCC
Confidence 24455544 7788999994 7999999999999999999999999999987543211000000000000000 00
Q ss_pred chhhc-c-CCc-chHHHHhhhchHHHHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCC-hHHHHHHHHhh----ccC
Q 021158 150 YICRF-Q-EPG-EIEEEFAQIDTARLMKKFLCLRIPKPLCIPKDTGLSTLPDPSALPSWLS-EEDVNYYASKF----NQK 221 (316)
Q Consensus 150 ~~~~~-~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~ 221 (316)
+...+ . .+. .............+...++....... . .... ++....+.... ...
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~-~~~~~~~~~~~~~~~~~~~~~~~ 243 (339)
T PRK07581 182 FNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRA-----------------M-GYASLEDFLVGFWEGNFLPRDPN 243 (339)
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccc-----------------c-ChhhHHHHHHHHHHHhhcccCcc
Confidence 00000 0 000 00000000000000011111000000 0 0000 11111111111 111
Q ss_pred CcCcccccccccc--ccc--ccccCCCCccccCcEEEEEeCCCcccCCCCcchhcccccccccccCcccEEEEcC-CCcc
Q 021158 222 GFTGPVNYYRCWD--LNW--ELMAPWTGVQIKVPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEG-VAHF 296 (316)
Q Consensus 222 ~~~~~~~~~~~~~--~~~--~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~ 296 (316)
.....+..+.... ... .......+.+|++|+|+|+|++|.++|++..+. +++.+|++ +++++++ +||+
T Consensus 244 ~~~~~l~~~~~~~~~~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~------l~~~ip~a-~l~~i~~~~GH~ 316 (339)
T PRK07581 244 NLLAMLWTWQRGDISRNPAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEA------EAALIPNA-ELRPIESIWGHL 316 (339)
T ss_pred cHHHHHHHhhhcccccCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHH------HHHhCCCC-eEEEeCCCCCcc
Confidence 1111000000000 000 000001122889999999999999999876544 67788999 9999998 8999
Q ss_pred cchhhHHHHHHHHHHHHHhC
Q 021158 297 INQEKAEEVGAHIYEFIKKF 316 (316)
Q Consensus 297 ~~~~~~~~~~~~i~~fl~~~ 316 (316)
+++++|+++.+.|.+||+++
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~ 336 (339)
T PRK07581 317 AGFGQNPADIAFIDAALKEL 336 (339)
T ss_pred ccccCcHHHHHHHHHHHHHH
Confidence 99999999999999999874
No 23
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=100.00 E-value=5.1e-33 Score=223.60 Aligned_cols=273 Identities=17% Similarity=0.215 Sum_probs=160.8
Q ss_pred EEEeCCeeEEEEEeCC-CCeEEEEccCCCchh------------hhHHhhh---hhhcCCceEEccCCCCCCCCCCCCCC
Q 021158 8 TVATNGINMHVASIGT-GPAVLFIHGFPELWY------------SWRNQLL---YLSSRGYRAIAPDLRGYGDTDAPPSV 71 (316)
Q Consensus 8 ~~~~~g~~l~~~~~g~-~p~il~~HG~~~~~~------------~~~~~~~---~l~~~g~~v~~~D~~G~G~s~~~~~~ 71 (316)
..+.+|.+++|...|+ ++++||+||+.++.. .|.+++. .|...+|+|+++|+||||.|..
T Consensus 40 ~~~~~~~~l~y~~~G~~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~---- 115 (343)
T PRK08775 40 HAGLEDLRLRYELIGPAGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLD---- 115 (343)
T ss_pred CCCCCCceEEEEEeccCCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCC----
Confidence 3455899999999995 667777777766554 6888886 5743359999999999998842
Q ss_pred cchhHHHHHHHHHHHHHHhCCcce-EEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCCCCCCccccchhhhhhccccc
Q 021158 72 TSYTALHLVGDLIGLLDKLGIHQV-FLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYY 150 (316)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~-~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (316)
..++..++++|+.+++++++.+++ +++||||||++|+.+|.++|++|+++|++++....... . ............
T Consensus 116 ~~~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~-~---~~~~~~~~~~~~ 191 (343)
T PRK08775 116 VPIDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPY-A---AAWRALQRRAVA 191 (343)
T ss_pred CCCCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHH-H---HHHHHHHHHHHH
Confidence 246778999999999999999775 79999999999999999999999999999986432110 0 000000000000
Q ss_pred hhhccC-Ccc---hHHH--Hh-hhchHHHHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHH-HhhccCC
Q 021158 151 ICRFQE-PGE---IEEE--FA-QIDTARLMKKFLCLRIPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYA-SKFNQKG 222 (316)
Q Consensus 151 ~~~~~~-~~~---~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 222 (316)
...... ... .... +. ......+... +..... ..... ... .....+.... .......
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~-----------~~~-~~~~~l~~~~~~~~~~~~ 255 (343)
T PRK08775 192 LGQLQCAEKHGLALARQLAMLSYRTPEEFEER-FDAPPE---VINGR-----------VRV-AAEDYLDAAGAQYVARTP 255 (343)
T ss_pred cCCCCCCchhHHHHHHHHHHHHcCCHHHHHHH-hCCCcc---ccCCC-----------ccc-hHHHHHHHHHHHHHHhcC
Confidence 000000 000 0000 00 0000001111 110000 00000 000 0000111000 0000001
Q ss_pred cCcccccccccccccccccCCCCccccCcEEEEEeCCCcccCCCCcchhcccccccccc-cCcccEEEEcC-CCcccchh
Q 021158 223 FTGPVNYYRCWDLNWELMAPWTGVQIKVPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYV-PYLQDVVVMEG-VAHFINQE 300 (316)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~gH~~~~~ 300 (316)
...........+.. ... +.++++|+|+|+|++|.++|++.... +.+.. |++ +++++++ +||++++|
T Consensus 256 ~~~~~~~~~~~~~~-~~~----l~~I~~PtLvi~G~~D~~~p~~~~~~------~~~~i~p~a-~l~~i~~~aGH~~~lE 323 (343)
T PRK08775 256 VNAYLRLSESIDLH-RVD----PEAIRVPTVVVAVEGDRLVPLADLVE------LAEGLGPRG-SLRVLRSPYGHDAFLK 323 (343)
T ss_pred hhHHHHHHHHHhhc-CCC----hhcCCCCeEEEEeCCCEeeCHHHHHH------HHHHcCCCC-eEEEEeCCccHHHHhc
Confidence 11011111111100 001 12899999999999999999876544 45555 688 9999985 99999999
Q ss_pred hHHHHHHHHHHHHHhC
Q 021158 301 KAEEVGAHIYEFIKKF 316 (316)
Q Consensus 301 ~~~~~~~~i~~fl~~~ 316 (316)
+|++|++.|.+||++.
T Consensus 324 ~Pe~~~~~l~~FL~~~ 339 (343)
T PRK08775 324 ETDRIDAILTTALRST 339 (343)
T ss_pred CHHHHHHHHHHHHHhc
Confidence 9999999999999763
No 24
>PHA02857 monoglyceride lipase; Provisional
Probab=100.00 E-value=1.6e-32 Score=215.18 Aligned_cols=253 Identities=19% Similarity=0.171 Sum_probs=158.6
Q ss_pred eEEEeCCeeEEEEEeCC----CCeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHH
Q 021158 7 TTVATNGINMHVASIGT----GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGD 82 (316)
Q Consensus 7 ~~~~~~g~~l~~~~~g~----~p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~ 82 (316)
.+++.||.+|+|..+.+ .+.|+++||+++++..|..+++.|++.||+|+++|+||||.|+.... ...++.++++|
T Consensus 4 ~~~~~~g~~l~~~~~~~~~~~~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~-~~~~~~~~~~d 82 (276)
T PHA02857 4 CMFNLDNDYIYCKYWKPITYPKALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEKM-MIDDFGVYVRD 82 (276)
T ss_pred eeecCCCCEEEEEeccCCCCCCEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCccC-CcCCHHHHHHH
Confidence 46677999999987644 35677779999999999999999999999999999999999976431 23466667777
Q ss_pred HHHHHHHh----CCcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCCCCCCccccchhhhhhccccchhhccCCc
Q 021158 83 LIGLLDKL----GIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQEPG 158 (316)
Q Consensus 83 ~~~~~~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (316)
+...++.+ ...+++++||||||.+|+.+|.++|++++++|+++|....... .....+...
T Consensus 83 ~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~--~~~~~~~~~-------------- 146 (276)
T PHA02857 83 VVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAV--PRLNLLAAK-------------- 146 (276)
T ss_pred HHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccccc--cHHHHHHHH--------------
Confidence 77777654 3458999999999999999999999999999999986542110 000000000
Q ss_pred chHHHHhhhchHHHHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhccCCcCc--cccc---cccc
Q 021158 159 EIEEEFAQIDTARLMKKFLCLRIPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFNQKGFTG--PVNY---YRCW 233 (316)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~ 233 (316)
....+....... . . .+..+.+................. ...+ ....
T Consensus 147 -------------~~~~~~~~~~~~------~-----~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (276)
T PHA02857 147 -------------LMGIFYPNKIVG------K-----L-----CPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKA 197 (276)
T ss_pred -------------HHHHhCCCCccC------C-----C-----CHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHH
Confidence 000000000000 0 0 000000000000000000000000 0000 0000
Q ss_pred ccccccccCCCCccccCcEEEEEeCCCcccCCCCcchhcccccccccc-cCcccEEEEcCCCcccchhhH---HHHHHHH
Q 021158 234 DLNWELMAPWTGVQIKVPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYV-PYLQDVVVMEGVAHFINQEKA---EEVGAHI 309 (316)
Q Consensus 234 ~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~gH~~~~~~~---~~~~~~i 309 (316)
....... +.++++|+|+++|++|.++|++.... +.+.. ++. ++.+++++||.++.|.+ +++.+.|
T Consensus 198 ~~~~~~~----l~~i~~Pvliv~G~~D~i~~~~~~~~------l~~~~~~~~-~~~~~~~~gH~~~~e~~~~~~~~~~~~ 266 (276)
T PHA02857 198 TNKVRKI----IPKIKTPILILQGTNNEISDVSGAYY------FMQHANCNR-EIKIYEGAKHHLHKETDEVKKSVMKEI 266 (276)
T ss_pred HHHHHHh----cccCCCCEEEEecCCCCcCChHHHHH------HHHHccCCc-eEEEeCCCcccccCCchhHHHHHHHHH
Confidence 0000111 12889999999999999999987765 33443 456 99999999999998855 6799999
Q ss_pred HHHHHhC
Q 021158 310 YEFIKKF 316 (316)
Q Consensus 310 ~~fl~~~ 316 (316)
.+||+++
T Consensus 267 ~~~l~~~ 273 (276)
T PHA02857 267 ETWIFNR 273 (276)
T ss_pred HHHHHHh
Confidence 9999863
No 25
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=100.00 E-value=1.1e-32 Score=213.96 Aligned_cols=260 Identities=18% Similarity=0.144 Sum_probs=163.9
Q ss_pred EeCCeeEEEEEe-CCCCeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHH
Q 021158 10 ATNGINMHVASI-GTGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLD 88 (316)
Q Consensus 10 ~~~g~~l~~~~~-g~~p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~ 88 (316)
+-||.+++|.+. +++|+|||+||++.+...|.+++..|.+.||+|+++|+||||.|...+. ..++++++++++.++++
T Consensus 3 ~~~~~~~~~~~~~~~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~-~~~~~~~~~~~l~~~i~ 81 (273)
T PLN02211 3 EENGEEVTDMKPNRQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDAD-SVTTFDEYNKPLIDFLS 81 (273)
T ss_pred cccccccccccccCCCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCcc-cCCCHHHHHHHHHHHHH
Confidence 347888988876 5579999999999999999999999988899999999999998854432 34789999999999999
Q ss_pred HhC-CcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCCCCCCccccchhhhhhccccchhhc-c---CCcchHHH
Q 021158 89 KLG-IHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRF-Q---EPGEIEEE 163 (316)
Q Consensus 89 ~~~-~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~ 163 (316)
.++ .++++++||||||.++..++.++|++|+++|++++......... ...+...+......... . ........
T Consensus 82 ~l~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (273)
T PLN02211 82 SLPENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQT--DEDMKDGVPDLSEFGDVYELGFGLGPDQPP 159 (273)
T ss_pred hcCCCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCCCCH--HHHHhccccchhhhccceeeeeccCCCCCC
Confidence 985 57999999999999999999999999999999987533211100 00000000000000000 0 00000000
Q ss_pred HhhhchHHHHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhccCCcCcccccccccccccccccCC
Q 021158 164 FAQIDTARLMKKFLCLRIPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFNQKGFTGPVNYYRCWDLNWELMAPW 243 (316)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (316)
........+...++.. ...++............... .+...... ...
T Consensus 160 ~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~----~~~~~~~~--~~~-- 206 (273)
T PLN02211 160 TSAIIKKEFRRKILYQ-------------------------MSPQEDSTLAAMLLRPGPIL----ALRSARFE--EET-- 206 (273)
T ss_pred ceeeeCHHHHHHHHhc-------------------------CCCHHHHHHHHHhcCCcCcc----cccccccc--ccc--
Confidence 0000000000000000 01111111111111111111 01110000 000
Q ss_pred CCccc-cCcEEEEEeCCCcccCCCCcchhcccccccccccCcccEEEEcCCCcccchhhHHHHHHHHHHHHHh
Q 021158 244 TGVQI-KVPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQEKAEEVGAHIYEFIKK 315 (316)
Q Consensus 244 ~~~~i-~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 315 (316)
..+ ++|+++|.|++|..+|++..+. +.+..++. +++.++ +||.+++++|+++.+.|.++...
T Consensus 207 --~~~~~vP~l~I~g~~D~~ip~~~~~~------m~~~~~~~-~~~~l~-~gH~p~ls~P~~~~~~i~~~a~~ 269 (273)
T PLN02211 207 --GDIDKVPRVYIKTLHDHVVKPEQQEA------MIKRWPPS-QVYELE-SDHSPFFSTPFLLFGLLIKAAAS 269 (273)
T ss_pred --cccCccceEEEEeCCCCCCCHHHHHH------HHHhCCcc-EEEEEC-CCCCccccCHHHHHHHHHHHHHH
Confidence 144 8999999999999999986654 66778888 999997 79999999999999999988653
No 26
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=100.00 E-value=1.4e-31 Score=201.54 Aligned_cols=127 Identities=24% Similarity=0.379 Sum_probs=104.8
Q ss_pred eeEEEe-CCeeEEEEEeC----CCCeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCC--CcchhHHH
Q 021158 6 HTTVAT-NGINMHVASIG----TGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPS--VTSYTALH 78 (316)
Q Consensus 6 ~~~~~~-~g~~l~~~~~g----~~p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~--~~~~~~~~ 78 (316)
.+.+.+ ++..+...... ..+++|++||+|++...|..-.+.|++. ++|+++|++|+|+|+++.= ........
T Consensus 67 ~~~v~i~~~~~iw~~~~~~~~~~~~plVliHGyGAg~g~f~~Nf~~La~~-~~vyaiDllG~G~SSRP~F~~d~~~~e~~ 145 (365)
T KOG4409|consen 67 KKYVRIPNGIEIWTITVSNESANKTPLVLIHGYGAGLGLFFRNFDDLAKI-RNVYAIDLLGFGRSSRPKFSIDPTTAEKE 145 (365)
T ss_pred eeeeecCCCceeEEEeecccccCCCcEEEEeccchhHHHHHHhhhhhhhc-CceEEecccCCCCCCCCCCCCCcccchHH
Confidence 344455 34444444332 3589999999999999999999999985 9999999999999998751 12334557
Q ss_pred HHHHHHHHHHHhCCcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCCCCC
Q 021158 79 LVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNP 133 (316)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~ 133 (316)
+++-+.++....++.+.+|+|||+||.++..+|.+||++|+.+||++|...+..+
T Consensus 146 fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~ 200 (365)
T KOG4409|consen 146 FVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKP 200 (365)
T ss_pred HHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCC
Confidence 8899999999999999999999999999999999999999999999998876543
No 27
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=100.00 E-value=2.8e-32 Score=213.93 Aligned_cols=255 Identities=25% Similarity=0.325 Sum_probs=159.7
Q ss_pred CCCeEEEEccCCCchhhhHHhhhhhhcC-CceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCcceEEEEec
Q 021158 23 TGPAVLFIHGFPELWYSWRNQLLYLSSR-GYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHD 101 (316)
Q Consensus 23 ~~p~il~~HG~~~~~~~~~~~~~~l~~~-g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S 101 (316)
++|+||++||++++...|+..+..|.+. |+.|+++|++|+|.++..+....|+..++++.+..++......+++++|||
T Consensus 57 ~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~~~~~~~lvghS 136 (326)
T KOG1454|consen 57 DKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEVFVEPVSLVGHS 136 (326)
T ss_pred CCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhhcCcceEEEEeC
Confidence 4689999999999999999999999876 599999999999966555544669999999999999999999999999999
Q ss_pred HHHHHHHHHHhhchhHHhhhh---hccCCCCCCCCCccccchhhhhhccccchhhccCCcchHHHHhhhchHHHHHHhhh
Q 021158 102 WGALIAWYFCLFRPDRVKALV---NMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQEPGEIEEEFAQIDTARLMKKFLC 178 (316)
Q Consensus 102 ~Gg~~a~~~a~~~p~~v~~~i---l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (316)
+||.+|+.+|+.+|+.|+++| +++++........... ...............+.. .......+...+.
T Consensus 137 ~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~------~~~~~~~~~~~~~ 207 (326)
T KOG1454|consen 137 LGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGL---RRLLDKFLSALELLIPLS------LTEPVRLVSEGLL 207 (326)
T ss_pred cHHHHHHHHHHhCcccccceeeecccccccccCCcchhHH---HHhhhhhccHhhhcCccc------cccchhheeHhhh
Confidence 999999999999999999999 5555544322211110 000000000000000000 0000000000000
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhccC-----CcCccccccccccc---ccccccCCCCcccc-
Q 021158 179 LRIPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFNQK-----GFTGPVNYYRCWDL---NWELMAPWTGVQIK- 249 (316)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~---~~~~~~~~~~~~i~- 249 (316)
. .............+......... ........+..... ...... +++.
T Consensus 208 ~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~i~~ 264 (326)
T KOG1454|consen 208 R-------------------CLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLI----KKIWK 264 (326)
T ss_pred c-------------------ceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhh----ccccC
Confidence 0 00000000000001111110000 00001111111111 111111 1565
Q ss_pred CcEEEEEeCCCcccCCCCcchhcccccccccccCcccEEEEcCCCcccchhhHHHHHHHHHHHHHhC
Q 021158 250 VPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQEKAEEVGAHIYEFIKKF 316 (316)
Q Consensus 250 ~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 316 (316)
||+|+++|++|.++|.+.+.. +.+..|++ ++++++++||.+++|.|+++++.|..|+..+
T Consensus 265 ~pvlii~G~~D~~~p~~~~~~------~~~~~pn~-~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 265 CPVLIIWGDKDQIVPLELAEE------LKKKLPNA-ELVEIPGAGHLPHLERPEEVAALLRSFIARL 324 (326)
T ss_pred CceEEEEcCcCCccCHHHHHH------HHhhCCCc-eEEEeCCCCcccccCCHHHHHHHHHHHHHHh
Confidence 999999999999999985544 66777999 9999999999999999999999999999763
No 28
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=5.7e-32 Score=217.10 Aligned_cols=122 Identities=17% Similarity=0.320 Sum_probs=100.4
Q ss_pred eEEEeCCeeEEEEEeCC------CCeEEEEccCCCch-hhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHH
Q 021158 7 TTVATNGINMHVASIGT------GPAVLFIHGFPELW-YSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHL 79 (316)
Q Consensus 7 ~~~~~~g~~l~~~~~g~------~p~il~~HG~~~~~-~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~ 79 (316)
.+...+|.+|+|+.+++ +++|||+||++.+. ..|..++..|.++||+|+++|+||||.|+.... ...+.+.+
T Consensus 36 ~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~-~~~~~~~~ 114 (330)
T PLN02298 36 FFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRA-YVPNVDLV 114 (330)
T ss_pred eEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccc-cCCCHHHH
Confidence 44555999999987642 34699999998664 346677888998999999999999999975432 24578889
Q ss_pred HHHHHHHHHHhCC------cceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCC
Q 021158 80 VGDLIGLLDKLGI------HQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFP 129 (316)
Q Consensus 80 ~~~~~~~~~~~~~------~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 129 (316)
++|+..+++.+.. .+++|+||||||.+++.++.++|++|+++|++++...
T Consensus 115 ~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~ 170 (330)
T PLN02298 115 VEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCK 170 (330)
T ss_pred HHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEeccccc
Confidence 9999999998743 3699999999999999999999999999999998654
No 29
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=100.00 E-value=1.4e-32 Score=221.82 Aligned_cols=121 Identities=25% Similarity=0.357 Sum_probs=100.6
Q ss_pred EeCCeeEEEEEeCC-----CCeEEEEccCCCchh-----------hhHHhh---hhhhcCCceEEccCCCC--CCCCCCC
Q 021158 10 ATNGINMHVASIGT-----GPAVLFIHGFPELWY-----------SWRNQL---LYLSSRGYRAIAPDLRG--YGDTDAP 68 (316)
Q Consensus 10 ~~~g~~l~~~~~g~-----~p~il~~HG~~~~~~-----------~~~~~~---~~l~~~g~~v~~~D~~G--~G~s~~~ 68 (316)
.++|.+|+|..+|+ +|+||++||++++.. .|..++ ..|...+|+|+++|+|| ||.|...
T Consensus 12 ~~~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~ 91 (351)
T TIGR01392 12 VLSDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPS 91 (351)
T ss_pred ccCCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCC
Confidence 45789999999984 579999999999763 477775 36656679999999999 5665431
Q ss_pred C---C-------CcchhHHHHHHHHHHHHHHhCCcc-eEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCC
Q 021158 69 P---S-------VTSYTALHLVGDLIGLLDKLGIHQ-VFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPP 130 (316)
Q Consensus 69 ~---~-------~~~~~~~~~~~~~~~~~~~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~ 130 (316)
. . ...++++++++++.+++++++.++ ++++||||||++++.+|.++|++++++|++++....
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 164 (351)
T TIGR01392 92 SINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARH 164 (351)
T ss_pred CCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcC
Confidence 1 1 125789999999999999999998 999999999999999999999999999999986643
No 30
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=100.00 E-value=8.4e-32 Score=208.63 Aligned_cols=250 Identities=24% Similarity=0.368 Sum_probs=155.0
Q ss_pred CCeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHH-HHHHHHHhCCcceEEEEecH
Q 021158 24 GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGD-LIGLLDKLGIHQVFLVGHDW 102 (316)
Q Consensus 24 ~p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~G~S~ 102 (316)
+|+||++||++++...|.++++.|+ +||+|+++|+||+|.|+.+......++++.+++ +..+++.++.++++++|||+
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 79 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIELLG-PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGIEPFFLVGYSM 79 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHHHhc-ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCCCeEEEEEecc
Confidence 4789999999999999999999998 689999999999999987654456789999999 78888888888999999999
Q ss_pred HHHHHHHHHhhchhHHhhhhhccCCCCCCCCCccccchhhhhhccccchhhccCCcchHHHHhhhchHHHHHHhhhccCC
Q 021158 103 GALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQEPGEIEEEFAQIDTARLMKKFLCLRIP 182 (316)
Q Consensus 103 Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (316)
||.+++.+|.++|++++++|++++............ .. .........+.......+...+......
T Consensus 80 Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~----~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (251)
T TIGR03695 80 GGRIALYYALQYPERVQGLILESGSPGLATEEERAA----RR----------QNDEQLAQRFEQEGLEAFLDDWYQQPLF 145 (251)
T ss_pred HHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhh----hh----------hcchhhhhHHHhcCccHHHHHHhcCcee
Confidence 999999999999999999999987543321100000 00 0000000001111111111111110000
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhccCCcCcccccccccccccccccCCCCccccCcEEEEEeCCCcc
Q 021158 183 KPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFNQKGFTGPVNYYRCWDLNWELMAPWTGVQIKVPVKYIVGDQDLV 262 (316)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~ 262 (316)
.. ...+.......+...............+................++++|+++++|++|..
T Consensus 146 ~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~ 207 (251)
T TIGR03695 146 AS------------------QKNLPPEQRQALRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEK 207 (251)
T ss_pred ee------------------cccCChHHhHHHHHhcccccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchH
Confidence 00 000111111111111100000000000000000000000001127899999999999987
Q ss_pred cCCCCcchhcccccccccccCcccEEEEcCCCcccchhhHHHHHHHHHHHHH
Q 021158 263 YNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQEKAEEVGAHIYEFIK 314 (316)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 314 (316)
++ +.. +.+.+..++. ++++++++||++++++|+++.+.|.+||+
T Consensus 208 ~~-~~~------~~~~~~~~~~-~~~~~~~~gH~~~~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 208 FV-QIA------KEMQKLLPNL-TLVIIANAGHNIHLENPEAFAKILLAFLE 251 (251)
T ss_pred HH-HHH------HHHHhcCCCC-cEEEEcCCCCCcCccChHHHHHHHHHHhC
Confidence 64 222 2356777888 99999999999999999999999999984
No 31
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.98 E-value=6.9e-32 Score=208.44 Aligned_cols=238 Identities=20% Similarity=0.219 Sum_probs=147.2
Q ss_pred CCC-CeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCcceEEEEe
Q 021158 22 GTG-PAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGH 100 (316)
Q Consensus 22 g~~-p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 100 (316)
|++ |+|||+||++++...|..+++.|.+ +|+|+++|+||+|.|+... .++.+++++++.+.+ .++++++||
T Consensus 1 g~g~~~iv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~s~~~~---~~~~~~~~~~~~~~~----~~~~~lvG~ 72 (245)
T TIGR01738 1 GQGNVHLVLIHGWGMNAEVFRCLDEELSA-HFTLHLVDLPGHGRSRGFG---PLSLADAAEAIAAQA----PDPAIWLGW 72 (245)
T ss_pred CCCCceEEEEcCCCCchhhHHHHHHhhcc-CeEEEEecCCcCccCCCCC---CcCHHHHHHHHHHhC----CCCeEEEEE
Confidence 455 8999999999999999999999987 4999999999999987643 457777777766543 268999999
Q ss_pred cHHHHHHHHHHhhchhHHhhhhhccCCCCCCCCCccccchhhhhhccccchhhccCCcchHHHHhhhchHHHHHHhhhcc
Q 021158 101 DWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQEPGEIEEEFAQIDTARLMKKFLCLR 180 (316)
Q Consensus 101 S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (316)
||||.+++.++.++|++++++|++++........... ....... ...+ ..... ......+..++...
T Consensus 73 S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~-~~~~~~~-----~~~~------~~~~~-~~~~~~~~~~~~~~ 139 (245)
T TIGR01738 73 SLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWP-EGIKPDV-----LTGF------QQQLS-DDYQRTIERFLALQ 139 (245)
T ss_pred cHHHHHHHHHHHHCHHhhheeeEecCCcccccCCccc-ccCCHHH-----HHHH------HHHhh-hhHHHHHHHHHHHH
Confidence 9999999999999999999999998765322110000 0000000 0000 00000 00000111111100
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhccCCcC------cccccccccccccccccCCCCccccCcEEE
Q 021158 181 IPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFNQKGFT------GPVNYYRCWDLNWELMAPWTGVQIKVPVKY 254 (316)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~ 254 (316)
..... ........+...+...... .....+...+.... ..++++|+++
T Consensus 140 ~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------l~~i~~Pvli 193 (245)
T TIGR01738 140 TLGTP--------------------TARQDARALKQTLLARPTPNVQVLQAGLEILATVDLRQP------LQNISVPFLR 193 (245)
T ss_pred HhcCC--------------------ccchHHHHHHHHhhccCCCCHHHHHHHHHHhhcccHHHH------HhcCCCCEEE
Confidence 00000 0001111111111000000 00000000111111 1288999999
Q ss_pred EEeCCCcccCCCCcchhcccccccccccCcccEEEEcCCCcccchhhHHHHHHHHHHHH
Q 021158 255 IVGDQDLVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQEKAEEVGAHIYEFI 313 (316)
Q Consensus 255 i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 313 (316)
++|++|.++|++..+. +++..+++ ++++++++||++++|+|+++++.|.+|+
T Consensus 194 i~g~~D~~~~~~~~~~------~~~~~~~~-~~~~~~~~gH~~~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 194 LYGYLDGLVPAKVVPY------LDKLAPHS-ELYIFAKAAHAPFLSHAEAFCALLVAFK 245 (245)
T ss_pred EeecCCcccCHHHHHH------HHHhCCCC-eEEEeCCCCCCccccCHHHHHHHHHhhC
Confidence 9999999999876554 56778898 9999999999999999999999999996
No 32
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.97 E-value=9.4e-32 Score=218.33 Aligned_cols=121 Identities=24% Similarity=0.336 Sum_probs=98.4
Q ss_pred EeCCeeEEEEEeCC-----CCeEEEEccCCCchhh-------------hHHhhh---hhhcCCceEEccCCCCC-CCCCC
Q 021158 10 ATNGINMHVASIGT-----GPAVLFIHGFPELWYS-------------WRNQLL---YLSSRGYRAIAPDLRGY-GDTDA 67 (316)
Q Consensus 10 ~~~g~~l~~~~~g~-----~p~il~~HG~~~~~~~-------------~~~~~~---~l~~~g~~v~~~D~~G~-G~s~~ 67 (316)
+++|.+++|...|+ +|+|||+||++++... |..++. .|...+|+|+++|++|+ |.|..
T Consensus 29 ~~~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~ 108 (379)
T PRK00175 29 VLPPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTG 108 (379)
T ss_pred CcCCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCC
Confidence 45688899999884 5899999999999874 666652 44345699999999983 44432
Q ss_pred CCC------------CcchhHHHHHHHHHHHHHHhCCcce-EEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCC
Q 021158 68 PPS------------VTSYTALHLVGDLIGLLDKLGIHQV-FLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPP 130 (316)
Q Consensus 68 ~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~-~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~ 130 (316)
+.+ ...++++++++++.+++++++.+++ +++||||||++++.+|.++|++|+++|++++....
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 184 (379)
T PRK00175 109 PSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARL 184 (379)
T ss_pred CCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCccc
Confidence 210 0257999999999999999999994 89999999999999999999999999999976543
No 33
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.97 E-value=1.4e-32 Score=209.94 Aligned_cols=224 Identities=33% Similarity=0.510 Sum_probs=147.7
Q ss_pred EEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCcceEEEEecHHHHH
Q 021158 27 VLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWGALI 106 (316)
Q Consensus 27 il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~ 106 (316)
|||+||++++...|..+++.|+ +||+|+++|+||+|.|+.......++++++++++.+++++++.++++++|||+||.+
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~~ 79 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALA-RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGIKKVILVGHSMGGMI 79 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHH-TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTTSSEEEEEETHHHHH
T ss_pred eEEECCCCCCHHHHHHHHHHHh-CCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccccccccccccccccccc
Confidence 7999999999999999999995 689999999999999988764457889999999999999999999999999999999
Q ss_pred HHHHHhhchhHHhhhhhccCCCCCCCCC--ccccchhhhhhccccchhhccCCcchHHHHhhhchHHHHHHhhhccCCCC
Q 021158 107 AWYFCLFRPDRVKALVNMSVPFPPRNPA--VRPLNNFRAVYGDDYYICRFQEPGEIEEEFAQIDTARLMKKFLCLRIPKP 184 (316)
Q Consensus 107 a~~~a~~~p~~v~~~il~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (316)
++.++.++|++|+++|+++++....... ......+...... ... ....+....+...
T Consensus 80 a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~-----~~~~~~~~~~~~~---- 138 (228)
T PF12697_consen 80 ALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAW------------RSR-----SLRRLASRFFYRW---- 138 (228)
T ss_dssp HHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHH------------HHH-----HHHHHHHHHHHHH----
T ss_pred ccccccccccccccceeecccccccccccccccchhhhhhhhc------------ccc-----ccccccccccccc----
Confidence 9999999999999999999876432110 0000000000000 000 0000000000000
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhccCCcCcccccccc--cccccccccCCCCccccCcEEEEEeCCCcc
Q 021158 185 LCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFNQKGFTGPVNYYRC--WDLNWELMAPWTGVQIKVPVKYIVGDQDLV 262 (316)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~ 262 (316)
........+... ........++. ......... .++++|+++++|++|.+
T Consensus 139 ---------------------~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~----~~~~~pvl~i~g~~D~~ 189 (228)
T PF12697_consen 139 ---------------------FDGDEPEDLIRS----SRRALAEYLRSNLWQADLSEAL----PRIKVPVLVIHGEDDPI 189 (228)
T ss_dssp ---------------------HTHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHH----HGSSSEEEEEEETTSSS
T ss_pred ---------------------cccccccccccc----cccccccccccccccccccccc----cccCCCeEEeecCCCCC
Confidence 000111111100 00000000000 000000111 17899999999999999
Q ss_pred cCCCCcchhcccccccccccCcccEEEEcCCCcccchhhHHHHHHH
Q 021158 263 YNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQEKAEEVGAH 308 (316)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~ 308 (316)
++.+..+. +.+..+++ ++++++++||++++++|++++++
T Consensus 190 ~~~~~~~~------~~~~~~~~-~~~~~~~~gH~~~~~~p~~~~~a 228 (228)
T PF12697_consen 190 VPPESAEE------LADKLPNA-ELVVIPGAGHFLFLEQPDEVAEA 228 (228)
T ss_dssp SHHHHHHH------HHHHSTTE-EEEEETTSSSTHHHHSHHHHHHH
T ss_pred CCHHHHHH------HHHHCCCC-EEEEECCCCCccHHHCHHHHhcC
Confidence 99655544 56777898 99999999999999999999864
No 34
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.97 E-value=7.5e-31 Score=207.62 Aligned_cols=122 Identities=25% Similarity=0.379 Sum_probs=102.1
Q ss_pred eEEEeCCeeEEEEEeCC---CCeEEEEccCCCch-hhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCc-chhHHHHHH
Q 021158 7 TTVATNGINMHVASIGT---GPAVLFIHGFPELW-YSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVT-SYTALHLVG 81 (316)
Q Consensus 7 ~~~~~~g~~l~~~~~g~---~p~il~~HG~~~~~-~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~-~~~~~~~~~ 81 (316)
.+++++|.++.|...+. +|+|||+||++++. ..|..+...|.+.||+|+++|+||||.|..+.... .++.+++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~ 84 (288)
T TIGR01250 5 GIITVDGGYHLFTKTGGEGEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVD 84 (288)
T ss_pred ceecCCCCeEEEEeccCCCCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHH
Confidence 35778888888887663 58999999986555 44566666666668999999999999998654312 378999999
Q ss_pred HHHHHHHHhCCcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCC
Q 021158 82 DLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPF 128 (316)
Q Consensus 82 ~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~ 128 (316)
++.+++++++.++++++||||||.+++.++.++|++++++|++++..
T Consensus 85 ~~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 131 (288)
T TIGR01250 85 ELEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLD 131 (288)
T ss_pred HHHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccc
Confidence 99999999999999999999999999999999999999999988754
No 35
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.97 E-value=1.7e-30 Score=212.68 Aligned_cols=251 Identities=20% Similarity=0.270 Sum_probs=164.3
Q ss_pred eEEEeCCeeEEEEEeCC--CCeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHH
Q 021158 7 TTVATNGINMHVASIGT--GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLI 84 (316)
Q Consensus 7 ~~~~~~g~~l~~~~~g~--~p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~ 84 (316)
.....++.+++|...|+ +|+|||+||++++...|..+...|.+. |+|+++|+||||.|.... ...+++++++++.
T Consensus 112 ~~~~~~~~~i~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~--~~~~~~~~~~~~~ 188 (371)
T PRK14875 112 RKARIGGRTVRYLRLGEGDGTPVVLIHGFGGDLNNWLFNHAALAAG-RPVIALDLPGHGASSKAV--GAGSLDELAAAVL 188 (371)
T ss_pred CcceEcCcEEEEecccCCCCCeEEEECCCCCccchHHHHHHHHhcC-CEEEEEcCCCCCCCCCCC--CCCCHHHHHHHHH
Confidence 34667889999988875 689999999999999999999999875 999999999999996554 4678999999999
Q ss_pred HHHHHhCCcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCCCCCCccccchhhhhhccccchhhccCCcchHHHH
Q 021158 85 GLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQEPGEIEEEF 164 (316)
Q Consensus 85 ~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (316)
++++.++.++++++|||+||.+++.+|.++|+++.++|+++++........ .+... +.......
T Consensus 189 ~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~----~~~~~---------~~~~~~~~--- 252 (371)
T PRK14875 189 AFLDALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEING----DYIDG---------FVAAESRR--- 252 (371)
T ss_pred HHHHhcCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccch----hHHHH---------hhcccchh---
Confidence 999999988999999999999999999999999999999987643221100 00000 00000000
Q ss_pred hhhchHHHHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhccCCcCccccc-----cccc--cccc
Q 021158 165 AQIDTARLMKKFLCLRIPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFNQKGFTGPVNY-----YRCW--DLNW 237 (316)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~--~~~~ 237 (316)
.....+...+.... .+....................... +... ....
T Consensus 253 ---~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (371)
T PRK14875 253 ---ELKPVLELLFADPA-----------------------LVTRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDL 306 (371)
T ss_pred ---HHHHHHHHHhcChh-----------------------hCCHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchhH
Confidence 00001111110000 0000000000000000000000000 0000 0000
Q ss_pred ccccCCCCccccCcEEEEEeCCCcccCCCCcchhcccccccccccCcccEEEEcCCCcccchhhHHHHHHHHHHHHHhC
Q 021158 238 ELMAPWTGVQIKVPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQEKAEEVGAHIYEFIKKF 316 (316)
Q Consensus 238 ~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 316 (316)
... ..+++||+++++|++|.++|++..+. ..++. ++.+++++||++++++|+++++.|.+||+++
T Consensus 307 ~~~----l~~i~~Pvlii~g~~D~~vp~~~~~~---------l~~~~-~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 371 (371)
T PRK14875 307 RDR----LASLAIPVLVIWGEQDRIIPAAHAQG---------LPDGV-AVHVLPGAGHMPQMEAAADVNRLLAEFLGKA 371 (371)
T ss_pred HHH----HhcCCCCEEEEEECCCCccCHHHHhh---------ccCCC-eEEEeCCCCCChhhhCHHHHHHHHHHHhccC
Confidence 001 12789999999999999998764432 22456 8999999999999999999999999999864
No 36
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.97 E-value=1.4e-29 Score=206.37 Aligned_cols=115 Identities=20% Similarity=0.350 Sum_probs=93.6
Q ss_pred eEEEEEeC---CCCeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCc---chhHHHHHHHHHHHHH
Q 021158 15 NMHVASIG---TGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVT---SYTALHLVGDLIGLLD 88 (316)
Q Consensus 15 ~l~~~~~g---~~p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~---~~~~~~~~~~~~~~~~ 88 (316)
.+++.... ++|+|||+||++++...|...++.|.++ |+|+++|+||||.|+.+.... ....+.+++++.++++
T Consensus 93 ~~~~~~~~~~~~~p~vvllHG~~~~~~~~~~~~~~L~~~-~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~ 171 (402)
T PLN02894 93 FINTVTFDSKEDAPTLVMVHGYGASQGFFFRNFDALASR-FRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRK 171 (402)
T ss_pred eEEEEEecCCCCCCEEEEECCCCcchhHHHHHHHHHHhC-CEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHH
Confidence 55554432 4689999999999999998888999875 999999999999997654110 1112345677888888
Q ss_pred HhCCcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCC
Q 021158 89 KLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPP 130 (316)
Q Consensus 89 ~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~ 130 (316)
.++.++++++||||||.+++.+|.++|++++++|++++....
T Consensus 172 ~l~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~ 213 (402)
T PLN02894 172 AKNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFS 213 (402)
T ss_pred HcCCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCcccc
Confidence 889899999999999999999999999999999999876543
No 37
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.97 E-value=7.1e-30 Score=198.58 Aligned_cols=271 Identities=24% Similarity=0.244 Sum_probs=173.7
Q ss_pred CceeEEEeCCeeEEEEEeCC---C-CeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHH
Q 021158 4 IEHTTVATNGINMHVASIGT---G-PAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHL 79 (316)
Q Consensus 4 ~~~~~~~~~g~~l~~~~~g~---~-p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~ 79 (316)
.+..+...+|..++|..+.. . .+||++||++.+...|..++..|..+||.|+++|+||||.|.+.......+++++
T Consensus 10 ~~~~~~~~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~~~ 89 (298)
T COG2267 10 TEGYFTGADGTRLRYRTWAAPEPPKGVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDSFADY 89 (298)
T ss_pred ccceeecCCCceEEEEeecCCCCCCcEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchhHHHH
Confidence 34566777999999998864 2 5899999999999999999999999999999999999999974222245569999
Q ss_pred HHHHHHHHHHhCC----cceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCCCCCCccccchhhhhhccccchhhcc
Q 021158 80 VGDLIGLLDKLGI----HQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQ 155 (316)
Q Consensus 80 ~~~~~~~~~~~~~----~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (316)
.+|+..+++.... .+++++||||||.+++.++.+++.++.++|+.+|...... . .....
T Consensus 90 ~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~-~-----~~~~~----------- 152 (298)
T COG2267 90 VDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGG-A-----ILRLI----------- 152 (298)
T ss_pred HHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCCh-h-----HHHHH-----------
Confidence 9999999998853 5899999999999999999999999999999998776542 0 00000
Q ss_pred CCcchHHHHhhhchHHHHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCC--ChHHHHHHHHhhccCCcCccccccccc
Q 021158 156 EPGEIEEEFAQIDTARLMKKFLCLRIPKPLCIPKDTGLSTLPDPSALPSWL--SEEDVNYYASKFNQKGFTGPVNYYRCW 233 (316)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (316)
.............+...... . . .......++ .++..+.|...-....-.....++...
T Consensus 153 -------------~~~~~~~~~~~~~p~~~~~~----~--~-~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~ 212 (298)
T COG2267 153 -------------LARLALKLLGRIRPKLPVDS----N--L-LEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLA 212 (298)
T ss_pred -------------HHHHhcccccccccccccCc----c--c-ccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHH
Confidence 00000000000000000000 0 0 000011111 123333333322101000001111100
Q ss_pred ccccccccCCCCccccCcEEEEEeCCCcccC-CCCcchhcccccccccccCcccEEEEcCCCcccchh-hH--HHHHHHH
Q 021158 234 DLNWELMAPWTGVQIKVPVKYIVGDQDLVYN-NKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQE-KA--EEVGAHI 309 (316)
Q Consensus 234 ~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~-~~--~~~~~~i 309 (316)
..............+++|+|+++|++|.+++ .+...+++ -....++. ++++++|+.|.++.| +. +++.+.+
T Consensus 213 ~~a~~~~~~~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~----~~~~~~~~-~~~~~~g~~He~~~E~~~~r~~~~~~~ 287 (298)
T COG2267 213 LLAGRVPALRDAPAIALPVLLLQGGDDRVVDNVEGLARFF----ERAGSPDK-ELKVIPGAYHELLNEPDRAREEVLKDI 287 (298)
T ss_pred HHhhcccchhccccccCCEEEEecCCCccccCcHHHHHHH----HhcCCCCc-eEEecCCcchhhhcCcchHHHHHHHHH
Confidence 0000000001112889999999999999999 56665543 22344566 999999999999888 55 8999999
Q ss_pred HHHHHhC
Q 021158 310 YEFIKKF 316 (316)
Q Consensus 310 ~~fl~~~ 316 (316)
.+|+.++
T Consensus 288 ~~~l~~~ 294 (298)
T COG2267 288 LAWLAEA 294 (298)
T ss_pred HHHHHhh
Confidence 9999763
No 38
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.97 E-value=3.4e-30 Score=177.86 Aligned_cols=248 Identities=18% Similarity=0.254 Sum_probs=171.9
Q ss_pred CceeEEEeCCeeEEEEEeCCCC-eEEEEccCCCch-hhhHHhhhhhhcC-CceEEccCCCCCCCCCCCCCCc-chhHHHH
Q 021158 4 IEHTTVATNGINMHVASIGTGP-AVLFIHGFPELW-YSWRNQLLYLSSR-GYRAIAPDLRGYGDTDAPPSVT-SYTALHL 79 (316)
Q Consensus 4 ~~~~~~~~~g~~l~~~~~g~~p-~il~~HG~~~~~-~~~~~~~~~l~~~-g~~v~~~D~~G~G~s~~~~~~~-~~~~~~~ 79 (316)
.++..+.++|.+|+|...|.|| .|++++|.-++. ..|.+.+..|.+. .+.|+++|.||+|.|.++.... ..-+..-
T Consensus 21 ~te~kv~vng~ql~y~~~G~G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~D 100 (277)
T KOG2984|consen 21 YTESKVHVNGTQLGYCKYGHGPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKD 100 (277)
T ss_pred hhhheeeecCceeeeeecCCCCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHh
Confidence 3456688999999999999987 789999976554 5688777655433 3899999999999998876322 2234566
Q ss_pred HHHHHHHHHHhCCcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCCCCCCccccchhhhhhccccchhhccCCcc
Q 021158 80 VGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQEPGE 159 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (316)
+++...+++.++.+++.++|||-||..|+..|+++++.|.++|..++...........+..++.. ..|....+
T Consensus 101 a~~avdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiRdv-------~kWs~r~R 173 (277)
T KOG2984|consen 101 AEYAVDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIRDV-------NKWSARGR 173 (277)
T ss_pred HHHHHHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchHHH-------hhhhhhhc
Confidence 77788889999999999999999999999999999999999999998776655433333333332 11111100
Q ss_pred --hHHHHhhhchHHHHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhccCCcCcccccccccccc-
Q 021158 160 --IEEEFAQIDTARLMKKFLCLRIPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFNQKGFTGPVNYYRCWDLN- 236 (316)
Q Consensus 160 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 236 (316)
....+...........+. +.+.++.. ..+.+
T Consensus 174 ~P~e~~Yg~e~f~~~wa~wv-------------------------------D~v~qf~~---------------~~dG~f 207 (277)
T KOG2984|consen 174 QPYEDHYGPETFRTQWAAWV-------------------------------DVVDQFHS---------------FCDGRF 207 (277)
T ss_pred chHHHhcCHHHHHHHHHHHH-------------------------------HHHHHHhh---------------cCCCch
Confidence 000000000000011110 00111110 00011
Q ss_pred cccccCCCCccccCcEEEEEeCCCcccCCCCcchhcccccccccccCcccEEEEcCCCcccchhhHHHHHHHHHHHHHh
Q 021158 237 WELMAPWTGVQIKVPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQEKAEEVGAHIYEFIKK 315 (316)
Q Consensus 237 ~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 315 (316)
.+...+ +++||+|+++|+.|++++...+-- +....+.+ ++.++|.++|.+++..+++|+..+.+||++
T Consensus 208 Cr~~lp----~vkcPtli~hG~kDp~~~~~hv~f------i~~~~~~a-~~~~~peGkHn~hLrya~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 208 CRLVLP----QVKCPTLIMHGGKDPFCGDPHVCF------IPVLKSLA-KVEIHPEGKHNFHLRYAKEFNKLVLDFLKS 275 (277)
T ss_pred Hhhhcc----cccCCeeEeeCCcCCCCCCCCccc------hhhhcccc-eEEEccCCCcceeeechHHHHHHHHHHHhc
Confidence 122223 999999999999999999876532 66788888 999999999999999999999999999986
No 39
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.97 E-value=9.4e-29 Score=196.04 Aligned_cols=124 Identities=24% Similarity=0.387 Sum_probs=103.0
Q ss_pred ceeEEEe-CCeeEEEEEeCC--CCeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHH
Q 021158 5 EHTTVAT-NGINMHVASIGT--GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVG 81 (316)
Q Consensus 5 ~~~~~~~-~g~~l~~~~~g~--~p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~ 81 (316)
...+++. +|.+++|...|+ +++|||+||++++...+ .+...+...+|+|+++|+||||.|+.......++.+++++
T Consensus 5 ~~~~~~~~~~~~l~y~~~g~~~~~~lvllHG~~~~~~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 83 (306)
T TIGR01249 5 VSGYLNVSDNHQLYYEQSGNPDGKPVVFLHGGPGSGTDP-GCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWDLVA 83 (306)
T ss_pred cCCeEEcCCCcEEEEEECcCCCCCEEEEECCCCCCCCCH-HHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHHHHH
Confidence 3455565 689999999886 78999999988775543 3444555567999999999999998654323567889999
Q ss_pred HHHHHHHHhCCcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCC
Q 021158 82 DLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFP 129 (316)
Q Consensus 82 ~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 129 (316)
|+..++++++.++++++||||||.+++.++.++|++++++|++++...
T Consensus 84 dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~ 131 (306)
T TIGR01249 84 DIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLL 131 (306)
T ss_pred HHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccC
Confidence 999999999999999999999999999999999999999999987654
No 40
>PRK05855 short chain dehydrogenase; Validated
Probab=99.97 E-value=7.8e-29 Score=214.67 Aligned_cols=121 Identities=28% Similarity=0.602 Sum_probs=101.7
Q ss_pred CceeEEEeCCeeEEEEEeCC--CCeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHH
Q 021158 4 IEHTTVATNGINMHVASIGT--GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVG 81 (316)
Q Consensus 4 ~~~~~~~~~g~~l~~~~~g~--~p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~ 81 (316)
.+..+++.+|.+|+|...|+ +|+|||+||++++...|.++++.|. .||+|+++|+||||.|+.......++.+++++
T Consensus 3 ~~~~~~~~~g~~l~~~~~g~~~~~~ivllHG~~~~~~~w~~~~~~L~-~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~ 81 (582)
T PRK05855 3 PRRTVVSSDGVRLAVYEWGDPDRPTVVLVHGYPDNHEVWDGVAPLLA-DRFRVVAYDVRGAGRSSAPKRTAAYTLARLAD 81 (582)
T ss_pred ceEEEEeeCCEEEEEEEcCCCCCCeEEEEcCCCchHHHHHHHHHHhh-cceEEEEecCCCCCCCCCCCcccccCHHHHHH
Confidence 44666788999999999885 6899999999999999999999995 47999999999999998765445789999999
Q ss_pred HHHHHHHHhCCcc-eEEEEecHHHHHHHHHHhh--chhHHhhhhhcc
Q 021158 82 DLIGLLDKLGIHQ-VFLVGHDWGALIAWYFCLF--RPDRVKALVNMS 125 (316)
Q Consensus 82 ~~~~~~~~~~~~~-~~l~G~S~Gg~~a~~~a~~--~p~~v~~~il~~ 125 (316)
|+..++++++..+ ++|+||||||.+++.++.+ .++++..++.++
T Consensus 82 dl~~~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~ 128 (582)
T PRK05855 82 DFAAVIDAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVS 128 (582)
T ss_pred HHHHHHHHhCCCCcEEEEecChHHHHHHHHHhCccchhhhhhheecc
Confidence 9999999998765 9999999999999888776 244444444443
No 41
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.97 E-value=3.7e-29 Score=232.75 Aligned_cols=124 Identities=27% Similarity=0.398 Sum_probs=103.7
Q ss_pred CceeEEEeC--Cee--EEEEEeCC---CCeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCC------
Q 021158 4 IEHTTVATN--GIN--MHVASIGT---GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPS------ 70 (316)
Q Consensus 4 ~~~~~~~~~--g~~--l~~~~~g~---~p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~------ 70 (316)
+....+.++ |.+ ++|...|+ +|+|||+||++++...|.++++.|.+. |+|+++|+||||.|.....
T Consensus 1344 l~~~~~~v~~~~~~~~i~~~~~G~~~~~~~vVllHG~~~s~~~w~~~~~~L~~~-~rVi~~Dl~G~G~S~~~~~~~~~~~ 1422 (1655)
T PLN02980 1344 VRTYELRVDVDGFSCLIKVHEVGQNAEGSVVLFLHGFLGTGEDWIPIMKAISGS-ARCISIDLPGHGGSKIQNHAKETQT 1422 (1655)
T ss_pred CceEEEEEccCceEEEEEEEecCCCCCCCeEEEECCCCCCHHHHHHHHHHHhCC-CEEEEEcCCCCCCCCCccccccccc
Confidence 344445554 322 55666664 589999999999999999999999875 9999999999999975431
Q ss_pred CcchhHHHHHHHHHHHHHHhCCcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCC
Q 021158 71 VTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPF 128 (316)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~ 128 (316)
...++.+++++++.+++++++.++++++||||||.+++.++.++|++|+++|++++..
T Consensus 1423 ~~~~si~~~a~~l~~ll~~l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p 1480 (1655)
T PLN02980 1423 EPTLSVELVADLLYKLIEHITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSP 1480 (1655)
T ss_pred cccCCHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCC
Confidence 1356889999999999999999999999999999999999999999999999998654
No 42
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.96 E-value=2e-29 Score=177.21 Aligned_cols=225 Identities=19% Similarity=0.236 Sum_probs=152.4
Q ss_pred CCeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHh---CCcceEEEEe
Q 021158 24 GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKL---GIHQVFLVGH 100 (316)
Q Consensus 24 ~p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~G~ 100 (316)
+-.||++||+.++....+.+.+.|.++||.|.++.+||||...... -..++++|.+++.+..+.+ +.+.|.++|.
T Consensus 15 ~~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~f--l~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~Gl 92 (243)
T COG1647 15 NRAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPEDF--LKTTPRDWWEDVEDGYRDLKEAGYDEIAVVGL 92 (243)
T ss_pred CEEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHHHH--hcCCHHHHHHHHHHHHHHHHHcCCCeEEEEee
Confidence 4799999999999999999999999999999999999999775433 4567778877777666655 6789999999
Q ss_pred cHHHHHHHHHHhhchhHHhhhhhccCCCCCCCCCccccchhhhhhccccchhhccCCcchHHHHhhhchHHHHHHhhhcc
Q 021158 101 DWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQEPGEIEEEFAQIDTARLMKKFLCLR 180 (316)
Q Consensus 101 S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (316)
||||.+++.+|..+| ++++|.++++........ .++.+... .++.-..
T Consensus 93 SmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~~-iie~~l~y----------------------------~~~~kk~- 140 (243)
T COG1647 93 SMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWRI-IIEGLLEY----------------------------FRNAKKY- 140 (243)
T ss_pred cchhHHHHHHHhhCC--ccceeeecCCcccccchh-hhHHHHHH----------------------------HHHhhhc-
Confidence 999999999999999 899999998876432210 00000000 0000000
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhccCCcCcccccccccccccccccCCCCccccCcEEEEEeCCC
Q 021158 181 IPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFNQKGFTGPVNYYRCWDLNWELMAPWTGVQIKVPVKYIVGDQD 260 (316)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D 260 (316)
...+++..+.....+........ ..+..+-........ .|..|++++.|++|
T Consensus 141 -----------------------e~k~~e~~~~e~~~~~~~~~~~~-~~~~~~i~~~~~~~~----~I~~pt~vvq~~~D 192 (243)
T COG1647 141 -----------------------EGKDQEQIDKEMKSYKDTPMTTT-AQLKKLIKDARRSLD----KIYSPTLVVQGRQD 192 (243)
T ss_pred -----------------------cCCCHHHHHHHHHHhhcchHHHH-HHHHHHHHHHHhhhh----hcccchhheecccC
Confidence 00112222222222211111000 001111111111111 88999999999999
Q ss_pred cccCCCCcchhcccccccccccCcccEEEEcCCCcccchh-hHHHHHHHHHHHHHh
Q 021158 261 LVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQE-KAEEVGAHIYEFIKK 315 (316)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~~ 315 (316)
..+|.+.+...+ ....++.|++.+++++||.+..+ ..+++.+.+..||+.
T Consensus 193 ~mv~~~sA~~Iy-----~~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 193 EMVPAESANFIY-----DHVESDDKELKWLEGSGHVITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred CCCCHHHHHHHH-----HhccCCcceeEEEccCCceeecchhHHHHHHHHHHHhhC
Confidence 999998876653 34555666999999999987665 789999999999974
No 43
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.96 E-value=7.7e-29 Score=200.19 Aligned_cols=250 Identities=19% Similarity=0.204 Sum_probs=153.8
Q ss_pred CCeeEEEEEeCC-----CCeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHH
Q 021158 12 NGINMHVASIGT-----GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGL 86 (316)
Q Consensus 12 ~g~~l~~~~~g~-----~p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~ 86 (316)
++..++|..+.+ .++||++||++++...|..+++.|.++||+|+++|+||||.|+.... ...+.+.+++|+..+
T Consensus 119 ~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~-~~~~~~~~~~Dl~~~ 197 (395)
T PLN02652 119 RRNALFCRSWAPAAGEMRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHG-YVPSLDYVVEDTEAF 197 (395)
T ss_pred CCCEEEEEEecCCCCCCceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCC-CCcCHHHHHHHHHHH
Confidence 567788777654 36899999999999999999999999999999999999999987542 344778888999999
Q ss_pred HHHhCC----cceEEEEecHHHHHHHHHHhhchh---HHhhhhhccCCCCCCCCCccccchhhhhhccccchhhccCCcc
Q 021158 87 LDKLGI----HQVFLVGHDWGALIAWYFCLFRPD---RVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQEPGE 159 (316)
Q Consensus 87 ~~~~~~----~~~~l~G~S~Gg~~a~~~a~~~p~---~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (316)
++.+.. .+++++||||||.+++.++. +|+ +++++|+.+|........ . ....
T Consensus 198 l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~--~---~~~~--------------- 256 (395)
T PLN02652 198 LEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAH--P---IVGA--------------- 256 (395)
T ss_pred HHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccch--H---HHHH---------------
Confidence 888753 37999999999999998764 553 799999988764321110 0 0000
Q ss_pred hHHHHhhhchHHHHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCChHHH-HHHHHhhccCCcCccc---cccccccc
Q 021158 160 IEEEFAQIDTARLMKKFLCLRIPKPLCIPKDTGLSTLPDPSALPSWLSEEDV-NYYASKFNQKGFTGPV---NYYRCWDL 235 (316)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~ 235 (316)
+ ..+...+........ .. . . ........... ..+.......+..... ..++...
T Consensus 257 ----~-----~~l~~~~~p~~~~~~----~~------~-~-~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~- 314 (395)
T PLN02652 257 ----V-----APIFSLVAPRFQFKG----AN------K-R-GIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISS- 314 (395)
T ss_pred ----H-----HHHHHHhCCCCcccC----cc------c-c-cCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHH-
Confidence 0 000000000000000 00 0 0 00000000111 1010000000000000 0000000
Q ss_pred ccccccCCCCccccCcEEEEEeCCCcccCCCCcchhcccccccccc-cCcccEEEEcCCCcccchh-hHHHHHHHHHHHH
Q 021158 236 NWELMAPWTGVQIKVPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYV-PYLQDVVVMEGVAHFINQE-KAEEVGAHIYEFI 313 (316)
Q Consensus 236 ~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl 313 (316)
..... +.++++|+|+++|++|.++|++.++.++ .+.. ++. ++.++++++|.++.| +++++.+.|.+||
T Consensus 315 ~l~~~----L~~I~vPvLIi~G~~D~vvp~~~a~~l~-----~~~~~~~k-~l~~~~ga~H~l~~e~~~e~v~~~I~~FL 384 (395)
T PLN02652 315 YLTRN----FKSVTVPFMVLHGTADRVTDPLASQDLY-----NEAASRHK-DIKLYDGFLHDLLFEPEREEVGRDIIDWM 384 (395)
T ss_pred HHHhh----cccCCCCEEEEEeCCCCCCCHHHHHHHH-----HhcCCCCc-eEEEECCCeEEeccCCCHHHHHHHHHHHH
Confidence 00011 1288999999999999999998876643 2212 235 899999999998777 8999999999999
Q ss_pred Hh
Q 021158 314 KK 315 (316)
Q Consensus 314 ~~ 315 (316)
++
T Consensus 385 ~~ 386 (395)
T PLN02652 385 EK 386 (395)
T ss_pred HH
Confidence 75
No 44
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.96 E-value=1.2e-28 Score=182.38 Aligned_cols=264 Identities=18% Similarity=0.190 Sum_probs=166.8
Q ss_pred eEEEeCCeeEEEEEeCC----C--CeEEEEccCCCch-hhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHH
Q 021158 7 TTVATNGINMHVASIGT----G--PAVLFIHGFPELW-YSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHL 79 (316)
Q Consensus 7 ~~~~~~g~~l~~~~~g~----~--p~il~~HG~~~~~-~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~ 79 (316)
.+.+.+|.+++++.|-+ . -.|+++||++... ..|..++..|+..||.|+++|++|||.|+.... ..-+++..
T Consensus 31 ~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~-yi~~~d~~ 109 (313)
T KOG1455|consen 31 FFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHA-YVPSFDLV 109 (313)
T ss_pred eEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcc-cCCcHHHH
Confidence 34455899999887754 2 3799999999865 778889999999999999999999999996543 44578899
Q ss_pred HHHHHHHHHHhC------CcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCCCCCCccccchhhhhhccccchhh
Q 021158 80 VGDLIGLLDKLG------IHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICR 153 (316)
Q Consensus 80 ~~~~~~~~~~~~------~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (316)
++|+...++... ..+..++||||||.+++.++.++|+...|+|+++|.......... .......
T Consensus 110 v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp-~p~v~~~--------- 179 (313)
T KOG1455|consen 110 VDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKP-HPPVISI--------- 179 (313)
T ss_pred HHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCC-CcHHHHH---------
Confidence 999998888642 237899999999999999999999999999999997765332110 0000000
Q ss_pred ccCCcchHHHHhhhchHHHHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhh-ccCCcCcccccccc
Q 021158 154 FQEPGEIEEEFAQIDTARLMKKFLCLRIPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKF-NQKGFTGPVNYYRC 232 (316)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 232 (316)
...+..++..+. ..+..... ....-.++..+...... .-.........+.-
T Consensus 180 ----------------l~~l~~liP~wk----~vp~~d~~--------~~~~kdp~~r~~~~~npl~y~g~pRl~T~~El 231 (313)
T KOG1455|consen 180 ----------------LTLLSKLIPTWK----IVPTKDII--------DVAFKDPEKRKILRSDPLCYTGKPRLKTAYEL 231 (313)
T ss_pred ----------------HHHHHHhCCcee----ecCCcccc--------ccccCCHHHHHHhhcCCceecCCccHHHHHHH
Confidence 001111111111 00110000 00001111111111110 00000000011111
Q ss_pred cccccccccCCCCccccCcEEEEEeCCCcccCCCCcchhcccccccccccCcccEEEEcCCCcccch----hhHHHHHHH
Q 021158 233 WDLNWELMAPWTGVQIKVPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQ----EKAEEVGAH 308 (316)
Q Consensus 233 ~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~----~~~~~~~~~ 308 (316)
+.....+.. .+.++++|.+++||++|.++.++.++.+++ .....-|++..+||.-|.++. |+-+.+...
T Consensus 232 Lr~~~~le~--~l~~vtvPflilHG~dD~VTDp~~Sk~Lye-----~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~D 304 (313)
T KOG1455|consen 232 LRVTADLEK--NLNEVTVPFLILHGTDDKVTDPKVSKELYE-----KASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGD 304 (313)
T ss_pred HHHHHHHHH--hcccccccEEEEecCCCcccCcHHHHHHHH-----hccCCCCceeccccHHHHhhcCCCchhHHHHHHH
Confidence 111111100 011899999999999999999999988753 333333599999999997764 466788999
Q ss_pred HHHHHHhC
Q 021158 309 IYEFIKKF 316 (316)
Q Consensus 309 i~~fl~~~ 316 (316)
|.+||+++
T Consensus 305 I~~Wl~~r 312 (313)
T KOG1455|consen 305 IISWLDER 312 (313)
T ss_pred HHHHHHhc
Confidence 99999864
No 45
>PLN02511 hydrolase
Probab=99.96 E-value=1.6e-29 Score=205.14 Aligned_cols=258 Identities=17% Similarity=0.261 Sum_probs=151.1
Q ss_pred CCeeEEEEEe--------CCCCeEEEEccCCCchhh-h-HHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHH
Q 021158 12 NGINMHVASI--------GTGPAVLFIHGFPELWYS-W-RNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVG 81 (316)
Q Consensus 12 ~g~~l~~~~~--------g~~p~il~~HG~~~~~~~-~-~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~ 81 (316)
||..+.+.-. .++|+||++||+++++.. | ..++..+.++||+|+++|+||||.|.... .......+++
T Consensus 80 DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~--~~~~~~~~~~ 157 (388)
T PLN02511 80 DGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTT--PQFYSASFTG 157 (388)
T ss_pred CCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCC--cCEEcCCchH
Confidence 7777764211 236899999999776543 4 56777777889999999999999997643 2223345677
Q ss_pred HHHHHHHHhCC----cceEEEEecHHHHHHHHHHhhchhH--HhhhhhccCCCCCCCCCccccchhhhhhccccchhhcc
Q 021158 82 DLIGLLDKLGI----HQVFLVGHDWGALIAWYFCLFRPDR--VKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQ 155 (316)
Q Consensus 82 ~~~~~~~~~~~----~~~~l~G~S~Gg~~a~~~a~~~p~~--v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (316)
|+.+++++++. .+++++||||||.+++.++.++|++ |.++++++++....... ..+...+. .
T Consensus 158 Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~----~~~~~~~~------~-- 225 (388)
T PLN02511 158 DLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIAD----EDFHKGFN------N-- 225 (388)
T ss_pred HHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHH----HHHhccHH------H--
Confidence 88888877754 5899999999999999999999987 78888887654321000 00000000 0
Q ss_pred CCcchHHHHhhhchHHHHHH---hhhccCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhcc--CCcCcccccc
Q 021158 156 EPGEIEEEFAQIDTARLMKK---FLCLRIPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFNQ--KGFTGPVNYY 230 (316)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 230 (316)
.....+... ....... .+...... ..... . .....+..+...+.. ..+.....+|
T Consensus 226 ---~y~~~~~~~-l~~~~~~~~~~~~~~~~~---~~~~~----------~---~~~~~~~~fd~~~t~~~~gf~~~~~yy 285 (388)
T PLN02511 226 ---VYDKALAKA-LRKIFAKHALLFEGLGGE---YNIPL----------V---ANAKTVRDFDDGLTRVSFGFKSVDAYY 285 (388)
T ss_pred ---HHHHHHHHH-HHHHHHHHHHHHhhCCCc---cCHHH----------H---HhCCCHHHHHHhhhhhcCCCCCHHHHH
Confidence 000000000 0001100 00000000 00000 0 000011112111111 1222222223
Q ss_pred cccccccccccCCCCccccCcEEEEEeCCCcccCCCCcchhcccccccccccCcccEEEEcCCCcccchhhHHH------
Q 021158 231 RCWDLNWELMAPWTGVQIKVPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQEKAEE------ 304 (316)
Q Consensus 231 ~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~------ 304 (316)
...+....+ .+|++|+|+|+|++|+++|.+.... ...+..|++ ++++++++||+.++|.|+.
T Consensus 286 ~~~s~~~~L------~~I~vPtLiI~g~dDpi~p~~~~~~-----~~~~~~p~~-~l~~~~~gGH~~~~E~p~~~~~~~w 353 (388)
T PLN02511 286 SNSSSSDSI------KHVRVPLLCIQAANDPIAPARGIPR-----EDIKANPNC-LLIVTPSGGHLGWVAGPEAPFGAPW 353 (388)
T ss_pred HHcCchhhh------ccCCCCeEEEEcCCCCcCCcccCcH-----hHHhcCCCE-EEEECCCcceeccccCCCCCCCCcc
Confidence 222222222 2899999999999999999875421 144667899 9999999999999999875
Q ss_pred HHHHHHHHHHh
Q 021158 305 VGAHIYEFIKK 315 (316)
Q Consensus 305 ~~~~i~~fl~~ 315 (316)
+.+.+.+||+.
T Consensus 354 ~~~~i~~Fl~~ 364 (388)
T PLN02511 354 TDPVVMEFLEA 364 (388)
T ss_pred HHHHHHHHHHH
Confidence 58899999864
No 46
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.96 E-value=7.9e-28 Score=181.03 Aligned_cols=253 Identities=19% Similarity=0.266 Sum_probs=166.5
Q ss_pred CCCeEEEEccCCCchhhhHHhhhhhhcC-CceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhC----CcceEE
Q 021158 23 TGPAVLFIHGFPELWYSWRNQLLYLSSR-GYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLG----IHQVFL 97 (316)
Q Consensus 23 ~~p~il~~HG~~~~~~~~~~~~~~l~~~-g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l 97 (316)
..|+++++||+-++...|..+...|+.. |..|+++|.|.||.|.... ..+...+++|+..+++..+ ..++++
T Consensus 51 ~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~---~h~~~~ma~dv~~Fi~~v~~~~~~~~~~l 127 (315)
T KOG2382|consen 51 RAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKIT---VHNYEAMAEDVKLFIDGVGGSTRLDPVVL 127 (315)
T ss_pred CCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCcccc---ccCHHHHHHHHHHHHHHcccccccCCcee
Confidence 3699999999999999999999999765 7789999999999998875 5679999999999999985 568999
Q ss_pred EEecHHH-HHHHHHHhhchhHHhhhhhccCCCCCCCCCccccchhhhhhccccchhhc----cCCcchHHHHhhhchHHH
Q 021158 98 VGHDWGA-LIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRF----QEPGEIEEEFAQIDTARL 172 (316)
Q Consensus 98 ~G~S~Gg-~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 172 (316)
+|||||| .+++..+...|+.+..+|.++.++...... .......+......... .........+........
T Consensus 128 ~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~---~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~~d~~ 204 (315)
T KOG2382|consen 128 LGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRS---YGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEVGFDNL 204 (315)
T ss_pred cccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcc---cchHHHHHHHHHhccccccccccHHHHHHHHHHHhcchH
Confidence 9999999 777888888999999999888655321111 11222222111111111 122222223333333333
Q ss_pred HHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhccCCcCcccccccccccccccccCCCCccccCcE
Q 021158 173 MKKFLCLRIPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFNQKGFTGPVNYYRCWDLNWELMAPWTGVQIKVPV 252 (316)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pv 252 (316)
+..++...... ....... .-...-..+..........++. ..+... ....||
T Consensus 205 ~~~fi~~nl~~-~~~~~s~-----------~w~~nl~~i~~~~~~~~~~s~~------------~~l~~~----~~~~pv 256 (315)
T KOG2382|consen 205 VRQFILTNLKK-SPSDGSF-----------LWRVNLDSIASLLDEYEILSYW------------ADLEDG----PYTGPV 256 (315)
T ss_pred HHHHHHHhcCc-CCCCCce-----------EEEeCHHHHHHHHHHHHhhccc------------cccccc----ccccce
Confidence 33333332211 0000000 0001112222222211100000 000001 668999
Q ss_pred EEEEeCCCcccCCCCcchhcccccccccccCcccEEEEcCCCcccchhhHHHHHHHHHHHHHhC
Q 021158 253 KYIVGDQDLVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQEKAEEVGAHIYEFIKKF 316 (316)
Q Consensus 253 l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 316 (316)
+++.|.++.+++.+.... +.+..|++ ++++++++||+++.|+|++|.+.|.+|+.++
T Consensus 257 lfi~g~~S~fv~~~~~~~------~~~~fp~~-e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 257 LFIKGLQSKFVPDEHYPR------MEKIFPNV-EVHELDEAGHWVHLEKPEEFIESISEFLEEP 313 (315)
T ss_pred eEEecCCCCCcChhHHHH------HHHhccch-heeecccCCceeecCCHHHHHHHHHHHhccc
Confidence 999999999999886544 77889999 9999999999999999999999999998753
No 47
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.95 E-value=4.1e-27 Score=189.40 Aligned_cols=282 Identities=17% Similarity=0.192 Sum_probs=164.4
Q ss_pred CCeeEEEEEeCC-----CCeEEEEccCCCchh-------------hhHHhhh---hhhcCCceEEccCCCCCCCCCCC--
Q 021158 12 NGINMHVASIGT-----GPAVLFIHGFPELWY-------------SWRNQLL---YLSSRGYRAIAPDLRGYGDTDAP-- 68 (316)
Q Consensus 12 ~g~~l~~~~~g~-----~p~il~~HG~~~~~~-------------~~~~~~~---~l~~~g~~v~~~D~~G~G~s~~~-- 68 (316)
...++.|+.+|. .++||++|++.+++. .|..++. .|.-..|.||++|..|-|.|..+
T Consensus 39 ~~~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~ 118 (389)
T PRK06765 39 PDVQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNV 118 (389)
T ss_pred CCceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCC
Confidence 456788999985 479999999988542 2666653 56555699999999987753211
Q ss_pred ---------C--------CCcchhHHHHHHHHHHHHHHhCCcceE-EEEecHHHHHHHHHHhhchhHHhhhhhccCCCCC
Q 021158 69 ---------P--------SVTSYTALHLVGDLIGLLDKLGIHQVF-LVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPP 130 (316)
Q Consensus 69 ---------~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~ 130 (316)
+ +...++++++++++..++++++++++. ++||||||++++.+|.++|++|+++|++++....
T Consensus 119 g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~~~ 198 (389)
T PRK06765 119 ITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNPQN 198 (389)
T ss_pred CCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCCCC
Confidence 1 123478999999999999999999986 9999999999999999999999999999876543
Q ss_pred CCCC-ccccchhhhhh------ccccchhhccCCc-chHHH----HhhhchHHHHHHhhhccCCCCCCCCCCCCCCCCCC
Q 021158 131 RNPA-VRPLNNFRAVY------GDDYYICRFQEPG-EIEEE----FAQIDTARLMKKFLCLRIPKPLCIPKDTGLSTLPD 198 (316)
Q Consensus 131 ~~~~-~~~~~~~~~~~------~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (316)
.... ....+..+... ....|... ..+. .+... .........+..-+..... ....
T Consensus 199 ~~~~~~~~~~~~~~ai~~dp~~~~G~y~~~-~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~----~~~~-------- 265 (389)
T PRK06765 199 DAWTSVNVLQNWAEAIRLDPNWKGGKYYGE-EQPMKGLTLALRMMTMNAFDEHFYETTFPRNAS----IEVD-------- 265 (389)
T ss_pred ChhHHHHHHHHHHHHHHhCCCCCCCCCCCC-CCchHHHHHHHHHHHHHcCCHHHHHHHcCcCcc----cccc--------
Confidence 3221 11111111111 00011000 0010 00000 0000111111111110000 0000
Q ss_pred CCCCCCCCChHHHHHH--------HHhhccCCcCccccccccccccccc-ccCCCCccccCcEEEEEeCCCcccCCCCcc
Q 021158 199 PSALPSWLSEEDVNYY--------ASKFNQKGFTGPVNYYRCWDLNWEL-MAPWTGVQIKVPVKYIVGDQDLVYNNKGTK 269 (316)
Q Consensus 199 ~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~ 269 (316)
..........++.| ...++...+......+...+..... .....+.++++|+|+|+|++|.++|++..+
T Consensus 266 --~~~~~~~~~~~e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~ 343 (389)
T PRK06765 266 --PYEKVSTLTSFEKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNY 343 (389)
T ss_pred --ccccccchhhHHHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHH
Confidence 00000000111222 1222222222222222222211000 011112388999999999999999987765
Q ss_pred hhccccccccccc----CcccEEEEcC-CCcccchhhHHHHHHHHHHHHHh
Q 021158 270 EYIHNGGFKKYVP----YLQDVVVMEG-VAHFINQEKAEEVGAHIYEFIKK 315 (316)
Q Consensus 270 ~~~~~~~~~~~~~----~~~~~~~~~~-~gH~~~~~~~~~~~~~i~~fl~~ 315 (316)
. +++.++ ++ +++++++ +||++++++|+++++.|.+||++
T Consensus 344 ~------la~~lp~~~~~a-~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 344 K------MVDILQKQGKYA-EVYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred H------HHHHhhhcCCCe-EEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 4 445554 67 8999985 89999999999999999999964
No 48
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.95 E-value=7e-27 Score=186.22 Aligned_cols=121 Identities=18% Similarity=0.275 Sum_probs=95.3
Q ss_pred EEeCCeeEEEEEeCC---CCeEEEEccCCCchh-hh-------------------------HHhhhhhhcCCceEEccCC
Q 021158 9 VATNGINMHVASIGT---GPAVLFIHGFPELWY-SW-------------------------RNQLLYLSSRGYRAIAPDL 59 (316)
Q Consensus 9 ~~~~g~~l~~~~~g~---~p~il~~HG~~~~~~-~~-------------------------~~~~~~l~~~g~~v~~~D~ 59 (316)
.+.+|.+|+++.+.+ ..+|+++||++.+.. .+ ..+++.|.++||.|+++|+
T Consensus 3 ~~~~g~~l~~~~~~~~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~ 82 (332)
T TIGR01607 3 RNKDGLLLKTYSWIVKNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDL 82 (332)
T ss_pred cCCCCCeEEEeeeeccCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEecc
Confidence 345899999888753 458999999998875 21 3578999999999999999
Q ss_pred CCCCCCCCCCC--CcchhHHHHHHHHHHHHHHhC------------------------CcceEEEEecHHHHHHHHHHhh
Q 021158 60 RGYGDTDAPPS--VTSYTALHLVGDLIGLLDKLG------------------------IHQVFLVGHDWGALIAWYFCLF 113 (316)
Q Consensus 60 ~G~G~s~~~~~--~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~l~G~S~Gg~~a~~~a~~ 113 (316)
||||.|..... ....+++++++|+..+++... ..|++++||||||.+++.++.+
T Consensus 83 rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~ 162 (332)
T TIGR01607 83 QGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLEL 162 (332)
T ss_pred cccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHH
Confidence 99999986421 122488999999999988642 2479999999999999999876
Q ss_pred chh--------HHhhhhhccCCCC
Q 021158 114 RPD--------RVKALVNMSVPFP 129 (316)
Q Consensus 114 ~p~--------~v~~~il~~~~~~ 129 (316)
+++ .++|+|+++|+..
T Consensus 163 ~~~~~~~~~~~~i~g~i~~s~~~~ 186 (332)
T TIGR01607 163 LGKSNENNDKLNIKGCISLSGMIS 186 (332)
T ss_pred hccccccccccccceEEEeccceE
Confidence 542 4888888887653
No 49
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.94 E-value=1.4e-25 Score=182.87 Aligned_cols=227 Identities=15% Similarity=0.129 Sum_probs=142.8
Q ss_pred CCeeEEEEEe-----CCCCeEEEEccCCCch-hhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHH
Q 021158 12 NGINMHVASI-----GTGPAVLFIHGFPELW-YSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIG 85 (316)
Q Consensus 12 ~g~~l~~~~~-----g~~p~il~~HG~~~~~-~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~ 85 (316)
+|.+|..... ++.|+||++||+++.. ..|..+++.|+++||+|+++|+||+|.|...+ ...+......++.+
T Consensus 177 ~g~~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~--~~~d~~~~~~avld 254 (414)
T PRK05077 177 GGGPITGFLHLPKGDGPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWK--LTQDSSLLHQAVLN 254 (414)
T ss_pred CCcEEEEEEEECCCCCCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCC--ccccHHHHHHHHHH
Confidence 4546654332 2246777777776654 56888889999999999999999999997543 12233444455656
Q ss_pred HHHHh---CCcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCCCCCCccccchhhhhhccccchhhccCCcchHH
Q 021158 86 LLDKL---GIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQEPGEIEE 162 (316)
Q Consensus 86 ~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (316)
.+... +.++++++|||+||.+++.+|..+|++++++|+++++......... .... .+ .
T Consensus 255 ~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~~---~~~~------------~p----~ 315 (414)
T PRK05077 255 ALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDPK---RQQQ------------VP----E 315 (414)
T ss_pred HHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcchh---hhhh------------ch----H
Confidence 66554 5578999999999999999999999999999999886531100000 0000 00 0
Q ss_pred HHhhhchHHHHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhccCCcCcccccccccccccccccC
Q 021158 163 EFAQIDTARLMKKFLCLRIPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFNQKGFTGPVNYYRCWDLNWELMAP 242 (316)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (316)
. ....+...+... ..+.+.+......+. .. ..... .
T Consensus 316 ~-----~~~~la~~lg~~------------------------~~~~~~l~~~l~~~s---l~----------~~~~l-~- 351 (414)
T PRK05077 316 M-----YLDVLASRLGMH------------------------DASDEALRVELNRYS---LK----------VQGLL-G- 351 (414)
T ss_pred H-----HHHHHHHHhCCC------------------------CCChHHHHHHhhhcc---ch----------hhhhh-c-
Confidence 0 000010000000 001111111111000 00 00000 0
Q ss_pred CCCccccCcEEEEEeCCCcccCCCCcchhcccccccccccCcccEEEEcCCCcccchhhHHHHHHHHHHHHHhC
Q 021158 243 WTGVQIKVPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQEKAEEVGAHIYEFIKKF 316 (316)
Q Consensus 243 ~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 316 (316)
+++++|+|+|+|++|.++|++..+. +++..++. +++++|++ ++.+.++++.+.|.+||+++
T Consensus 352 ---~~i~~PvLiI~G~~D~ivP~~~a~~------l~~~~~~~-~l~~i~~~---~~~e~~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 352 ---RRCPTPMLSGYWKNDPFSPEEDSRL------IASSSADG-KLLEIPFK---PVYRNFDKALQEISDWLEDR 412 (414)
T ss_pred ---cCCCCcEEEEecCCCCCCCHHHHHH------HHHhCCCC-eEEEccCC---CccCCHHHHHHHHHHHHHHH
Confidence 1789999999999999999987754 56778898 99999985 45679999999999999863
No 50
>PRK10985 putative hydrolase; Provisional
Probab=99.94 E-value=7.7e-26 Score=180.37 Aligned_cols=261 Identities=16% Similarity=0.150 Sum_probs=145.5
Q ss_pred eCCeeEEEE--EeC----CCCeEEEEccCCCchhh--hHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcch---hHHHH
Q 021158 11 TNGINMHVA--SIG----TGPAVLFIHGFPELWYS--WRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSY---TALHL 79 (316)
Q Consensus 11 ~~g~~l~~~--~~g----~~p~il~~HG~~~~~~~--~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~---~~~~~ 79 (316)
.||..+.+. ..+ ++|+||++||++++... +..++..|.++||+|+++|+||||.+..... ..+ ..+|.
T Consensus 39 ~dg~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~-~~~~~~~~~D~ 117 (324)
T PRK10985 39 PDGDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLH-RIYHSGETEDA 117 (324)
T ss_pred CCCCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCc-ceECCCchHHH
Confidence 367665432 211 25899999999876443 4668899999999999999999997754321 111 23333
Q ss_pred HHHHHHHHHHhCCcceEEEEecHHHHHHHHHHhhchhH--HhhhhhccCCCCCCCCCccccchhhhhhccccchhhccCC
Q 021158 80 VGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDR--VKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQEP 157 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~--v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (316)
...+..+.+..+..+++++||||||.+++.++.++++. +.++|+++++........ .+...+.. .
T Consensus 118 ~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~----~~~~~~~~-~-------- 184 (324)
T PRK10985 118 RFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSY----RMEQGFSR-V-------- 184 (324)
T ss_pred HHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHH----HHhhhHHH-H--------
Confidence 33333344445667899999999999988888876543 888999988765321100 00000000 0
Q ss_pred cchHHHHhhhchHHHHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhc--cCCcCccccccccccc
Q 021158 158 GEIEEEFAQIDTARLMKKFLCLRIPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFN--QKGFTGPVNYYRCWDL 235 (316)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 235 (316)
....+... ....+.......... ...+. ........+..+..... ..++.....++...+.
T Consensus 185 --~~~~l~~~-l~~~~~~~~~~~~~~---~~~~~-----------~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~ 247 (324)
T PRK10985 185 --YQRYLLNL-LKANAARKLAAYPGT---LPINL-----------AQLKSVRRLREFDDLITARIHGFADAIDYYRQCSA 247 (324)
T ss_pred --HHHHHHHH-HHHHHHHHHHhcccc---ccCCH-----------HHHhcCCcHHHHhhhheeccCCCCCHHHHHHHCCh
Confidence 00000000 000000001100000 00000 00000011222222221 1234444444443332
Q ss_pred ccccccCCCCccccCcEEEEEeCCCcccCCCCcchhcccccccccccCcccEEEEcCCCcccchhhH-----HHHHHHHH
Q 021158 236 NWELMAPWTGVQIKVPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQEKA-----EEVGAHIY 310 (316)
Q Consensus 236 ~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~-----~~~~~~i~ 310 (316)
...+ .++++|+++|+|++|.+++++.... +.+..++. ++++++++||+.+++.. ....+.+.
T Consensus 248 ~~~l------~~i~~P~lii~g~~D~~~~~~~~~~------~~~~~~~~-~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~ 314 (324)
T PRK10985 248 LPLL------NQIRKPTLIIHAKDDPFMTHEVIPK------PESLPPNV-EYQLTEHGGHVGFVGGTLLKPQMWLEQRIP 314 (324)
T ss_pred HHHH------hCCCCCEEEEecCCCCCCChhhChH------HHHhCCCe-EEEECCCCCceeeCCCCCCCCCccHHHHHH
Confidence 2222 2889999999999999999876643 44566788 89999999999998742 35666677
Q ss_pred HHHHh
Q 021158 311 EFIKK 315 (316)
Q Consensus 311 ~fl~~ 315 (316)
+|++.
T Consensus 315 ~~~~~ 319 (324)
T PRK10985 315 DWLTT 319 (324)
T ss_pred HHHHH
Confidence 77653
No 51
>PLN02872 triacylglycerol lipase
Probab=99.93 E-value=1.5e-24 Score=174.60 Aligned_cols=296 Identities=15% Similarity=0.168 Sum_probs=167.1
Q ss_pred eEEEeCCeeEEEEEeC---------CCCeEEEEccCCCchhhhH------HhhhhhhcCCceEEccCCCCCCCCCC----
Q 021158 7 TTVATNGINMHVASIG---------TGPAVLFIHGFPELWYSWR------NQLLYLSSRGYRAIAPDLRGYGDTDA---- 67 (316)
Q Consensus 7 ~~~~~~g~~l~~~~~g---------~~p~il~~HG~~~~~~~~~------~~~~~l~~~g~~v~~~D~~G~G~s~~---- 67 (316)
++.+-||..|...... ++|+|+++||+++++..|. .++..|+++||.|+++|+||++.|..
T Consensus 48 ~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~gh~~~ 127 (395)
T PLN02872 48 TIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSYGHVTL 127 (395)
T ss_pred EEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccccccCCCCC
Confidence 3444589998876632 2579999999999988883 35557889999999999999876532
Q ss_pred C---CCCcchhHHHHH-HHHHHHHHHh---CCcceEEEEecHHHHHHHHHHhhchh---HHhhhhhccCCCCCCCCCccc
Q 021158 68 P---PSVTSYTALHLV-GDLIGLLDKL---GIHQVFLVGHDWGALIAWYFCLFRPD---RVKALVNMSVPFPPRNPAVRP 137 (316)
Q Consensus 68 ~---~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~---~v~~~il~~~~~~~~~~~~~~ 137 (316)
. .....+++++++ .|+.++++.+ ..++++++||||||.+++.++ .+|+ +|+.+++++|...........
T Consensus 128 ~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~~~~~~~~~ 206 (395)
T PLN02872 128 SEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISYLDHVTAPL 206 (395)
T ss_pred CccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhhhccCCCHH
Confidence 1 111246788888 7998888876 337899999999999998555 5676 689999999876543211111
Q ss_pred cchhhhhh-ccc---cchhhccCCc-chHHHHhhh-----chHHHHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 021158 138 LNNFRAVY-GDD---YYICRFQEPG-EIEEEFAQI-----DTARLMKKFLCLRIPKPLCIPKDTGLSTLPDPSALPSWLS 207 (316)
Q Consensus 138 ~~~~~~~~-~~~---~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (316)
...+.... ... +....+.... ......... .....+..+.... .......+..++ ...+...+
T Consensus 207 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~----~~~n~~~~~~~~---~~~pagtS 279 (395)
T PLN02872 207 VLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTN----CCFNASRIDYYL---EYEPHPSS 279 (395)
T ss_pred HHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCC----cccchhhhhHHH---hcCCCcch
Confidence 10000000 000 0000000000 000000000 0011111111110 000000000000 11223344
Q ss_pred hHHHHHHHHhhccCCcCccccc-ccccc-cccccccCCCCccc--cCcEEEEEeCCCcccCCCCcchhcccccccccccC
Q 021158 208 EEDVNYYASKFNQKGFTGPVNY-YRCWD-LNWELMAPWTGVQI--KVPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYVPY 283 (316)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~i--~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~ 283 (316)
-..+..+.+......+.....- ..... ........+.+.++ ++|+++++|++|.+++++.... +.+.+++
T Consensus 280 ~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~------l~~~Lp~ 353 (395)
T PLN02872 280 VKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEH------TLAELPS 353 (395)
T ss_pred HHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHH------HHHHCCC
Confidence 4555555554433333221110 01110 11112233344477 6899999999999999877654 4566666
Q ss_pred cccEEEEcCCCccc---chhhHHHHHHHHHHHHHhC
Q 021158 284 LQDVVVMEGVAHFI---NQEKAEEVGAHIYEFIKKF 316 (316)
Q Consensus 284 ~~~~~~~~~~gH~~---~~~~~~~~~~~i~~fl~~~ 316 (316)
..++..++++||.. ..+.|+++.+.|.+||+++
T Consensus 354 ~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~ 389 (395)
T PLN02872 354 KPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSL 389 (395)
T ss_pred ccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHh
Confidence 32888999999964 4488999999999999763
No 52
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.92 E-value=6.8e-24 Score=165.04 Aligned_cols=116 Identities=20% Similarity=0.230 Sum_probs=87.0
Q ss_pred EEeCCeeEEEE-Ee-C--CCCeEEEEccCCC----chhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHH
Q 021158 9 VATNGINMHVA-SI-G--TGPAVLFIHGFPE----LWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLV 80 (316)
Q Consensus 9 ~~~~g~~l~~~-~~-g--~~p~il~~HG~~~----~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~ 80 (316)
+..+|.++.-. .. . ++++||++||++. +...|..+++.|+++||+|+++|+||||.|.... .+++++.
T Consensus 7 ~~~~~~~l~g~~~~p~~~~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~----~~~~~~~ 82 (274)
T TIGR03100 7 FSCEGETLVGVLHIPGASHTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN----LGFEGID 82 (274)
T ss_pred EEcCCcEEEEEEEcCCCCCCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC----CCHHHHH
Confidence 44566665422 21 1 3567888887653 3445677889999999999999999999987532 3566677
Q ss_pred HHHHHHHHHh-----CCcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCC
Q 021158 81 GDLIGLLDKL-----GIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFP 129 (316)
Q Consensus 81 ~~~~~~~~~~-----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 129 (316)
+|+.++++.+ +.++++++|||+||.+++.+|... ++|+++|+++|...
T Consensus 83 ~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~~-~~v~~lil~~p~~~ 135 (274)
T TIGR03100 83 ADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPAD-LRVAGLVLLNPWVR 135 (274)
T ss_pred HHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhhC-CCccEEEEECCccC
Confidence 7777777766 556799999999999999998654 57999999998643
No 53
>PRK13604 luxD acyl transferase; Provisional
Probab=99.92 E-value=3.1e-24 Score=163.72 Aligned_cols=119 Identities=21% Similarity=0.204 Sum_probs=89.3
Q ss_pred eEEEeCCeeEEEEEeCC-------CCeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCC-CCCCCCCCCcchhHHH
Q 021158 7 TTVATNGINMHVASIGT-------GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGY-GDTDAPPSVTSYTALH 78 (316)
Q Consensus 7 ~~~~~~g~~l~~~~~g~-------~p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~-G~s~~~~~~~~~~~~~ 78 (316)
.....+|.+|+-+...+ .++||++||++.+...+..+++.|+++||.|+.+|.||+ |.|+... ...+...
T Consensus 13 ~~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~--~~~t~s~ 90 (307)
T PRK13604 13 VICLENGQSIRVWETLPKENSPKKNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTI--DEFTMSI 90 (307)
T ss_pred eEEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCcc--ccCcccc
Confidence 33344789988654433 378999999999887899999999999999999999988 9997654 2233333
Q ss_pred HHHHHHHHHHHh---CCcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCC
Q 021158 79 LVGDLIGLLDKL---GIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFP 129 (316)
Q Consensus 79 ~~~~~~~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 129 (316)
...|+..+++.+ +.+++.|+||||||.+|+..|...+ ++++|+.+|...
T Consensus 91 g~~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~~~--v~~lI~~sp~~~ 142 (307)
T PRK13604 91 GKNSLLTVVDWLNTRGINNLGLIAASLSARIAYEVINEID--LSFLITAVGVVN 142 (307)
T ss_pred cHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcCCC--CCEEEEcCCccc
Confidence 355665444444 5568999999999999977776543 888888887654
No 54
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.91 E-value=2.9e-24 Score=177.49 Aligned_cols=257 Identities=14% Similarity=0.144 Sum_probs=152.6
Q ss_pred CCeEEEEccCCCchhhhH-----HhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCcceEEE
Q 021158 24 GPAVLFIHGFPELWYSWR-----NQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLV 98 (316)
Q Consensus 24 ~p~il~~HG~~~~~~~~~-----~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 98 (316)
+++||++||+......|+ .+++.|.++||+|+++|++|+|.+........|..+.+.+.+..+++..+.++++++
T Consensus 188 ~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~g~~kv~lv 267 (532)
T TIGR01838 188 KTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAITGEKQVNCV 267 (532)
T ss_pred CCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhcCCCCeEEE
Confidence 589999999988888875 799999999999999999999998765544566666777888888888899999999
Q ss_pred EecHHHHHHH----HHHhhc-hhHHhhhhhccCCCCCCCCCccc-------cchhhhhhccccchhhccCCcchHHHHhh
Q 021158 99 GHDWGALIAW----YFCLFR-PDRVKALVNMSVPFPPRNPAVRP-------LNNFRAVYGDDYYICRFQEPGEIEEEFAQ 166 (316)
Q Consensus 99 G~S~Gg~~a~----~~a~~~-p~~v~~~il~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (316)
||||||.++. .+++.+ +++|+++++++++.......... ...+........ ......+...+..
T Consensus 268 G~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~~G----~lpg~~m~~~F~~ 343 (532)
T TIGR01838 268 GYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGGGG----YLDGRQMAVTFSL 343 (532)
T ss_pred EECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHhcC----CCCHHHHHHHHHh
Confidence 9999999852 245555 77899999999887644321100 000111110000 0000112222332
Q ss_pred hchHHHH-HHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhccCCcCcccccccccccccccccCCCC
Q 021158 167 IDTARLM-KKFLCLRIPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFNQKGFTGPVNYYRCWDLNWELMAPWTG 245 (316)
Q Consensus 167 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (316)
......+ ..++............+ ......+. ..+..+....+.+.+-..+.... ..+...+.... +
T Consensus 344 lrp~~l~w~~~v~~yl~g~~~~~fd-ll~Wn~D~----t~lP~~~~~~~lr~ly~~N~L~~-G~~~v~g~~~d------L 411 (532)
T TIGR01838 344 LRENDLIWNYYVDNYLKGKSPVPFD-LLFWNSDS----TNLPGKMHNFYLRNLYLQNALTT-GGLEVCGVRLD------L 411 (532)
T ss_pred cChhhHHHHHHHHHHhcCCCccchh-HHHHhccC----ccchHHHHHHHHHHHHhcCCCcC-CeeEECCEecc------h
Confidence 2222221 11221111110000000 11111111 11233444444433322221111 11121111112 2
Q ss_pred ccccCcEEEEEeCCCcccCCCCcchhcccccccccccCcccEEEEcCCCcccchhhHH
Q 021158 246 VQIKVPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQEKAE 303 (316)
Q Consensus 246 ~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~ 303 (316)
.+|++|++++.|++|.++|++.+.. +.+..++. +..+++++||.+++++|.
T Consensus 412 ~~I~vPvLvV~G~~D~IvP~~sa~~------l~~~i~~~-~~~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 412 SKVKVPVYIIATREDHIAPWQSAYR------GAALLGGP-KTFVLGESGHIAGVVNPP 462 (532)
T ss_pred hhCCCCEEEEeeCCCCcCCHHHHHH------HHHHCCCC-EEEEECCCCCchHhhCCC
Confidence 2899999999999999999887654 55677888 888999999999998774
No 55
>PRK10566 esterase; Provisional
Probab=99.91 E-value=1.7e-23 Score=161.62 Aligned_cols=102 Identities=22% Similarity=0.254 Sum_probs=73.3
Q ss_pred EEEEEeC----CCCeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcch-----hHHHHHHHHHHH
Q 021158 16 MHVASIG----TGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSY-----TALHLVGDLIGL 86 (316)
Q Consensus 16 l~~~~~g----~~p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~-----~~~~~~~~~~~~ 86 (316)
++|...+ +.|+||++||++++...|..+++.|+++||.|+++|+||||.+......... ...+..+++.++
T Consensus 15 ~~~~p~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (249)
T PRK10566 15 LHAFPAGQRDTPLPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTL 94 (249)
T ss_pred EEEcCCCCCCCCCCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHH
Confidence 5555543 2589999999999998999999999999999999999999976432110111 011223333333
Q ss_pred HHH------hCCcceEEEEecHHHHHHHHHHhhchhH
Q 021158 87 LDK------LGIHQVFLVGHDWGALIAWYFCLFRPDR 117 (316)
Q Consensus 87 ~~~------~~~~~~~l~G~S~Gg~~a~~~a~~~p~~ 117 (316)
++. .+.++++++|||+||.+++.++.++|+.
T Consensus 95 ~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~ 131 (249)
T PRK10566 95 RAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWV 131 (249)
T ss_pred HHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCe
Confidence 333 2346899999999999999999988863
No 56
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.91 E-value=5.6e-24 Score=171.68 Aligned_cols=121 Identities=17% Similarity=0.141 Sum_probs=89.1
Q ss_pred EeCCeeEEEEEeC----CCCeEEEEccCCCchhhh-----HHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHH
Q 021158 10 ATNGINMHVASIG----TGPAVLFIHGFPELWYSW-----RNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLV 80 (316)
Q Consensus 10 ~~~g~~l~~~~~g----~~p~il~~HG~~~~~~~~-----~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~ 80 (316)
+.++..+..+... .+++||++||+..+...+ ..+++.|.++||+|+++|++|+|.|+...+...+..++..
T Consensus 44 ~~~~~~l~~~~~~~~~~~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~~~~~d~~~~~~~ 123 (350)
T TIGR01836 44 REDKVVLYRYTPVKDNTHKTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRYLTLDDYINGYID 123 (350)
T ss_pred EcCcEEEEEecCCCCcCCCCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhcCCHHHHHHHHHH
Confidence 3355565544321 246899999986655544 6889999999999999999999987644321122222233
Q ss_pred HHHHHHHHHhCCcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCC
Q 021158 81 GDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPP 130 (316)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~ 130 (316)
+.+..+.+..+.++++++||||||.+++.+++.+|++++++|+++++...
T Consensus 124 ~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~ 173 (350)
T TIGR01836 124 KCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDF 173 (350)
T ss_pred HHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCchheeeEEEecccccc
Confidence 44555556667889999999999999999999999999999999988764
No 57
>PRK11071 esterase YqiA; Provisional
Probab=99.90 E-value=2.4e-23 Score=152.09 Aligned_cols=184 Identities=18% Similarity=0.173 Sum_probs=124.7
Q ss_pred CeEEEEccCCCchhhhHH--hhhhhhcC--CceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCcceEEEEe
Q 021158 25 PAVLFIHGFPELWYSWRN--QLLYLSSR--GYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGH 100 (316)
Q Consensus 25 p~il~~HG~~~~~~~~~~--~~~~l~~~--g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 100 (316)
|+||++||++++...|.. +...|.+. +|+|+++|+||+| +++++++.+++++++.++++++||
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~-------------~~~~~~l~~l~~~~~~~~~~lvG~ 68 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP-------------ADAAELLESLVLEHGGDPLGLVGS 68 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH-------------HHHHHHHHHHHHHcCCCCeEEEEE
Confidence 689999999999999984 34566542 6999999999984 357888999999999899999999
Q ss_pred cHHHHHHHHHHhhchhHHhhhhhccCCCCCCCCCccccchhhhhhccccchhhccCCcchHHHHhhhchHHHHHHhhhcc
Q 021158 101 DWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQEPGEIEEEFAQIDTARLMKKFLCLR 180 (316)
Q Consensus 101 S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (316)
||||.+++.+|.++|. .+|+++|+..+. ..+..+....
T Consensus 69 S~Gg~~a~~~a~~~~~---~~vl~~~~~~~~---------------------------------------~~~~~~~~~~ 106 (190)
T PRK11071 69 SLGGYYATWLSQCFML---PAVVVNPAVRPF---------------------------------------ELLTDYLGEN 106 (190)
T ss_pred CHHHHHHHHHHHHcCC---CEEEECCCCCHH---------------------------------------HHHHHhcCCc
Confidence 9999999999999983 467788754320 0111111110
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhccCCcCcccccccccccccccccCCCCccccCcEEEEEeCCC
Q 021158 181 IPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFNQKGFTGPVNYYRCWDLNWELMAPWTGVQIKVPVKYIVGDQD 260 (316)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D 260 (316)
. .... .....++...+...... .. ... +..+|+++++|++|
T Consensus 107 ~-~~~~--------------~~~~~~~~~~~~d~~~~----------------~~----~~i----~~~~~v~iihg~~D 147 (190)
T PRK11071 107 E-NPYT--------------GQQYVLESRHIYDLKVM----------------QI----DPL----ESPDLIWLLQQTGD 147 (190)
T ss_pred c-cccC--------------CCcEEEcHHHHHHHHhc----------------CC----ccC----CChhhEEEEEeCCC
Confidence 0 0000 00000122222221110 00 000 46788999999999
Q ss_pred cccCCCCcchhcccccccccccCcccEEEEcCCCcccchhhHHHHHHHHHHHHH
Q 021158 261 LVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQEKAEEVGAHIYEFIK 314 (316)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 314 (316)
.++|++.+..++ + +. +.+.++|++|.. ...+++.+.|.+|++
T Consensus 148 e~V~~~~a~~~~------~---~~-~~~~~~ggdH~f--~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 148 EVLDYRQAVAYY------A---AC-RQTVEEGGNHAF--VGFERYFNQIVDFLG 189 (190)
T ss_pred CcCCHHHHHHHH------H---hc-ceEEECCCCcch--hhHHHhHHHHHHHhc
Confidence 999998876543 2 45 677889999977 444889999999985
No 58
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.89 E-value=1.2e-24 Score=166.45 Aligned_cols=76 Identities=39% Similarity=0.657 Sum_probs=70.6
Q ss_pred ceEEccCCCCCCCCCC--CCCCcchhHHHHHHHHHHHHHHhCCcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCC
Q 021158 52 YRAIAPDLRGYGDTDA--PPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVP 127 (316)
Q Consensus 52 ~~v~~~D~~G~G~s~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~ 127 (316)
|+|+++|+||+|.|++ ......++.+++++++..+++.++.++++++||||||.+++.+|+++|++|+++|+++++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~ 78 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPP 78 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESES
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeee
Confidence 6899999999999995 144478899999999999999999999999999999999999999999999999999986
No 59
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.89 E-value=7.4e-23 Score=149.13 Aligned_cols=117 Identities=28% Similarity=0.353 Sum_probs=93.3
Q ss_pred EEEeCCee--EEEEEeC----CCCeEEEEccCCCchhhhHHhhhhhhcC-CceEEccCCCCCCCCCCCCCCcchhHHHHH
Q 021158 8 TVATNGIN--MHVASIG----TGPAVLFIHGFPELWYSWRNQLLYLSSR-GYRAIAPDLRGYGDTDAPPSVTSYTALHLV 80 (316)
Q Consensus 8 ~~~~~g~~--l~~~~~g----~~p~il~~HG~~~~~~~~~~~~~~l~~~-g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~ 80 (316)
.++++|.. ++.+..+ ++|.++++||+|.+...|..++..|..+ ..+|+++|+||||.+...+. ...+.+.++
T Consensus 52 dv~i~~~~~t~n~Y~t~~~~t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e-~dlS~eT~~ 130 (343)
T KOG2564|consen 52 DVSIDGSDLTFNVYLTLPSATEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENE-DDLSLETMS 130 (343)
T ss_pred ccccCCCcceEEEEEecCCCCCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCCh-hhcCHHHHH
Confidence 35555544 4433333 4899999999999999999999988754 46788999999999977654 568999999
Q ss_pred HHHHHHHHHh---CCcceEEEEecHHHHHHHHHHhh--chhHHhhhhhccC
Q 021158 81 GDLIGLLDKL---GIHQVFLVGHDWGALIAWYFCLF--RPDRVKALVNMSV 126 (316)
Q Consensus 81 ~~~~~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~il~~~ 126 (316)
+|+..+++.+ ...+++|+||||||.+|.+.|.. -|. +.|++.++.
T Consensus 131 KD~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDV 180 (343)
T KOG2564|consen 131 KDFGAVIKELFGELPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDV 180 (343)
T ss_pred HHHHHHHHHHhccCCCceEEEeccccchhhhhhhhhhhchh-hhceEEEEE
Confidence 9999999987 23479999999999999887764 454 888888775
No 60
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.88 E-value=1.4e-22 Score=143.34 Aligned_cols=93 Identities=27% Similarity=0.402 Sum_probs=76.4
Q ss_pred eEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCcceEEEEecHHHH
Q 021158 26 AVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWGAL 105 (316)
Q Consensus 26 ~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ 105 (316)
+||++||.+++...|..+++.|+++||.|+.+|+|++|.+.. .....++.+++. .+..+.++++++|||+||.
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~-----~~~~~~~~~~~~--~~~~~~~~i~l~G~S~Gg~ 73 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDG-----ADAVERVLADIR--AGYPDPDRIILIGHSMGGA 73 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHH-----SHHHHHHHHHHH--HHHCTCCEEEEEEETHHHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccch-----hHHHHHHHHHHH--hhcCCCCcEEEEEEccCcH
Confidence 689999999999999999999999999999999999998732 223333333333 1123667999999999999
Q ss_pred HHHHHHhhchhHHhhhhhccC
Q 021158 106 IAWYFCLFRPDRVKALVNMSV 126 (316)
Q Consensus 106 ~a~~~a~~~p~~v~~~il~~~ 126 (316)
+++.++.+. .+++++|++++
T Consensus 74 ~a~~~~~~~-~~v~~~v~~~~ 93 (145)
T PF12695_consen 74 IAANLAARN-PRVKAVVLLSP 93 (145)
T ss_dssp HHHHHHHHS-TTESEEEEESE
T ss_pred HHHHHhhhc-cceeEEEEecC
Confidence 999999988 68999999997
No 61
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.87 E-value=4.4e-20 Score=144.54 Aligned_cols=115 Identities=42% Similarity=0.760 Sum_probs=94.3
Q ss_pred EeCCeeEEEEEeCC-CCeEEEEccCCCchhhhHHhhhhhhc---CCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHH
Q 021158 10 ATNGINMHVASIGT-GPAVLFIHGFPELWYSWRNQLLYLSS---RGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIG 85 (316)
Q Consensus 10 ~~~g~~l~~~~~g~-~p~il~~HG~~~~~~~~~~~~~~l~~---~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~ 85 (316)
...+..+.|...+. +|+++++||++++...|......+.. . |+++++|+||||.|. .. ......+++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~g~g~s~-~~---~~~~~~~~~~~~~ 80 (282)
T COG0596 6 AADGVRLAYREAGGGGPPLVLLHGFPGSSSVWRPVFKVLPALAAR-YRVIAPDLRGHGRSD-PA---GYSLSAYADDLAA 80 (282)
T ss_pred cCCCeEEEEeecCCCCCeEEEeCCCCCchhhhHHHHHHhhccccc-eEEEEecccCCCCCC-cc---cccHHHHHHHHHH
Confidence 34566777777765 67999999999999999884333332 3 899999999999997 11 2344445899999
Q ss_pred HHHHhCCcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCC
Q 021158 86 LLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFP 129 (316)
Q Consensus 86 ~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 129 (316)
+++.++..+++++|||+||.+++.++.++|++++++|++++...
T Consensus 81 ~~~~~~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~ 124 (282)
T COG0596 81 LLDALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPP 124 (282)
T ss_pred HHHHhCCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCC
Confidence 99999988999999999999999999999999999999998754
No 62
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.87 E-value=3.6e-21 Score=174.21 Aligned_cols=275 Identities=18% Similarity=0.220 Sum_probs=146.3
Q ss_pred CCCeEEEEccCCCchhhhHHh-----hhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHH---hCCcc
Q 021158 23 TGPAVLFIHGFPELWYSWRNQ-----LLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDK---LGIHQ 94 (316)
Q Consensus 23 ~~p~il~~HG~~~~~~~~~~~-----~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 94 (316)
.+|+|||+||++.+...|+.. ++.|.++||+|+++|+ |.++........++.+++..+.+.++. +..++
T Consensus 66 ~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~~~~ 142 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGMERNLADHVVALSEAIDTVKDVTGRD 142 (994)
T ss_pred CCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCccCCHHHHHHHHHHHHHHHHHhhCCc
Confidence 468999999999999999865 7889999999999994 665554321235666666666666554 34468
Q ss_pred eEEEEecHHHHHHHHHHhhc-hhHHhhhhhccCCCCCCCCCccccc-hh---hhhhccccchhhccCCcchHH-HHhhhc
Q 021158 95 VFLVGHDWGALIAWYFCLFR-PDRVKALVNMSVPFPPRNPAVRPLN-NF---RAVYGDDYYICRFQEPGEIEE-EFAQID 168 (316)
Q Consensus 95 ~~l~G~S~Gg~~a~~~a~~~-p~~v~~~il~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 168 (316)
++++||||||.+++.+++.+ +++|+++|+++++..........+. .. ...+...........+..... .+....
T Consensus 143 v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~ 222 (994)
T PRK07868 143 VHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRLDIPGWMARTGFQMLD 222 (994)
T ss_pred eEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhcCCCCHHHHHHHHHhcC
Confidence 99999999999999998755 5589999999887653221100000 00 000000000011111111111 111111
Q ss_pred hHHHHH---HhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhccCCcCcccccccccccccccccCCCC
Q 021158 169 TARLMK---KFLCLRIPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFNQKGFTGPVNYYRCWDLNWELMAPWTG 245 (316)
Q Consensus 169 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (316)
+..... .++................++....... .........+...+...+.... ..+.... .. -.+
T Consensus 223 p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~--~~~g~~~~~~~~~~~~~n~~~~-g~~~~~~--~~----~~L 293 (994)
T PRK07868 223 PVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWI--AWSGPAISELLKQFIAHNRMMT-GGFAING--QM----VTL 293 (994)
T ss_pred hhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhcc--ccchHHHHHHHHHHHHhCcccC-ceEEECC--EE----cch
Confidence 111111 1111111100000000000000000000 0000111112221110000000 0000000 00 012
Q ss_pred ccccCcEEEEEeCCCcccCCCCcchhcccccccccccCcccE-EEEcCCCcccchh---hHHHHHHHHHHHHHhC
Q 021158 246 VQIKVPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYVPYLQDV-VVMEGVAHFINQE---KAEEVGAHIYEFIKKF 316 (316)
Q Consensus 246 ~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~gH~~~~~---~~~~~~~~i~~fl~~~ 316 (316)
.+|++|+|+|+|++|.++|++..+. +.+..++. ++ .+++++||+.++- .++++...|.+||+++
T Consensus 294 ~~i~~P~L~i~G~~D~ivp~~~~~~------l~~~i~~a-~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~ 361 (994)
T PRK07868 294 ADITCPVLAFVGEVDDIGQPASVRG------IRRAAPNA-EVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWL 361 (994)
T ss_pred hhCCCCEEEEEeCCCCCCCHHHHHH------HHHhCCCC-eEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHh
Confidence 3999999999999999999987755 56778888 76 6789999987654 7788999999999863
No 63
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.86 E-value=3.4e-20 Score=130.04 Aligned_cols=211 Identities=17% Similarity=0.236 Sum_probs=142.6
Q ss_pred EeCCCCeEEEEccCCCchh--hhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCC-cc--
Q 021158 20 SIGTGPAVLFIHGFPELWY--SWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGI-HQ-- 94 (316)
Q Consensus 20 ~~g~~p~il~~HG~~~~~~--~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-- 94 (316)
+.|+..++|++||+-++.. .+..++..|++.|+.++.+|++|.|.|...-.... ....++|+..+++++.. .+
T Consensus 29 ~tgs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn--~~~eadDL~sV~q~~s~~nr~v 106 (269)
T KOG4667|consen 29 ETGSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGN--YNTEADDLHSVIQYFSNSNRVV 106 (269)
T ss_pred ccCCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCc--ccchHHHHHHHHHHhccCceEE
Confidence 4566789999999987654 46678889999999999999999999988764333 34456999999998843 33
Q ss_pred eEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCCCCCCccccchhhhhhccccchhhccCCcchHHHHhhhchHHHHH
Q 021158 95 VFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQEPGEIEEEFAQIDTARLMK 174 (316)
Q Consensus 95 ~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (316)
.+++|||-||.+++.+|.++++ ++-+|.+++-+....... ..+.. .++.
T Consensus 107 ~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~~I~--------------------------eRlg~----~~l~ 155 (269)
T KOG4667|consen 107 PVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKNGIN--------------------------ERLGE----DYLE 155 (269)
T ss_pred EEEEeecCccHHHHHHHHhhcC-chheEEcccccchhcchh--------------------------hhhcc----cHHH
Confidence 3589999999999999999986 677777666544322110 00000 0111
Q ss_pred HhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhccCCcCcccccccccccccccccCCCCccccCcEEE
Q 021158 175 KFLCLRIPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFNQKGFTGPVNYYRCWDLNWELMAPWTGVQIKVPVKY 254 (316)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~ 254 (316)
... +..+++.-.+.......++++.+......--...... . ..+||||-
T Consensus 156 ~ik-----------e~Gfid~~~rkG~y~~rvt~eSlmdrLntd~h~aclk----------------I----d~~C~VLT 204 (269)
T KOG4667|consen 156 RIK-----------EQGFIDVGPRKGKYGYRVTEESLMDRLNTDIHEACLK----------------I----DKQCRVLT 204 (269)
T ss_pred HHH-----------hCCceecCcccCCcCceecHHHHHHHHhchhhhhhcC----------------c----CccCceEE
Confidence 111 1113333333334445556655554433110000000 0 66999999
Q ss_pred EEeCCCcccCCCCcchhcccccccccccCcccEEEEcCCCcccchhh
Q 021158 255 IVGDQDLVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQEK 301 (316)
Q Consensus 255 i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 301 (316)
++|..|.++|.+.+++ +++.+|+- ++.++||+.|.....+
T Consensus 205 vhGs~D~IVPve~Ake------fAk~i~nH-~L~iIEgADHnyt~~q 244 (269)
T KOG4667|consen 205 VHGSEDEIVPVEDAKE------FAKIIPNH-KLEIIEGADHNYTGHQ 244 (269)
T ss_pred EeccCCceeechhHHH------HHHhccCC-ceEEecCCCcCccchh
Confidence 9999999999999887 78999996 9999999999765543
No 64
>PRK11460 putative hydrolase; Provisional
Probab=99.85 E-value=2.1e-20 Score=141.37 Aligned_cols=177 Identities=12% Similarity=0.127 Sum_probs=116.8
Q ss_pred CCeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCC---------Cc---chhHHHHHHHHHHHHH---
Q 021158 24 GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPS---------VT---SYTALHLVGDLIGLLD--- 88 (316)
Q Consensus 24 ~p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~---------~~---~~~~~~~~~~~~~~~~--- 88 (316)
.|+||++||++++...|.++++.|.+.++.+..++.+|...+..... .. .....+..+.+.+.++
T Consensus 16 ~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~ 95 (232)
T PRK11460 16 QQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVRYWQ 95 (232)
T ss_pred CcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHHHHH
Confidence 68999999999999999999999987655444555555432211000 00 1112222233333333
Q ss_pred -HhCC--cceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCCCCCCccccchhhhhhccccchhhccCCcchHHHHh
Q 021158 89 -KLGI--HQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQEPGEIEEEFA 165 (316)
Q Consensus 89 -~~~~--~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (316)
..+. ++++++|+|+||.+++.++.++|+.+.++|.+++.... .
T Consensus 96 ~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~-~--------------------------------- 141 (232)
T PRK11460 96 QQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYAS-L--------------------------------- 141 (232)
T ss_pred HhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecccccc-c---------------------------------
Confidence 3333 47999999999999999999988776766655432100 0
Q ss_pred hhchHHHHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhccCCcCcccccccccccccccccCCCC
Q 021158 166 QIDTARLMKKFLCLRIPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFNQKGFTGPVNYYRCWDLNWELMAPWTG 245 (316)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (316)
...
T Consensus 142 -----------------------------------------~~~------------------------------------ 144 (232)
T PRK11460 142 -----------------------------------------PET------------------------------------ 144 (232)
T ss_pred -----------------------------------------ccc------------------------------------
Confidence 000
Q ss_pred ccccCcEEEEEeCCCcccCCCCcchhcccccccccccCcccEEEEcCCCcccchhhHHHHHHHHHHHHH
Q 021158 246 VQIKVPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQEKAEEVGAHIYEFIK 314 (316)
Q Consensus 246 ~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 314 (316)
....+|+++++|++|.++|.+..+... +.+.+...+. ++++++++||.+..+..+.+.+.+.++|.
T Consensus 145 ~~~~~pvli~hG~~D~vvp~~~~~~~~--~~L~~~g~~~-~~~~~~~~gH~i~~~~~~~~~~~l~~~l~ 210 (232)
T PRK11460 145 APTATTIHLIHGGEDPVIDVAHAVAAQ--EALISLGGDV-TLDIVEDLGHAIDPRLMQFALDRLRYTVP 210 (232)
T ss_pred ccCCCcEEEEecCCCCccCHHHHHHHH--HHHHHCCCCe-EEEEECCCCCCCCHHHHHHHHHHHHHHcc
Confidence 034679999999999999998876543 3333433455 88889999999987777777777777664
No 65
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.83 E-value=9e-20 Score=132.84 Aligned_cols=188 Identities=18% Similarity=0.143 Sum_probs=125.5
Q ss_pred CCeEEEEccCCCchhhhHHhhhhhhc-CCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhC--CcceEEEEe
Q 021158 24 GPAVLFIHGFPELWYSWRNQLLYLSS-RGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLG--IHQVFLVGH 100 (316)
Q Consensus 24 ~p~il~~HG~~~~~~~~~~~~~~l~~-~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~G~ 100 (316)
.+++|+.||..........+...|.. -+++++++|++|+|.|...+. .....+.++.+.+.++.-. .++++|+|+
T Consensus 60 ~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~ps--E~n~y~Di~avye~Lr~~~g~~~~Iil~G~ 137 (258)
T KOG1552|consen 60 HPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPS--ERNLYADIKAVYEWLRNRYGSPERIILYGQ 137 (258)
T ss_pred ceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCcc--cccchhhHHHHHHHHHhhcCCCceEEEEEe
Confidence 48999999997666555555555654 259999999999999998874 3344444444444444433 568999999
Q ss_pred cHHHHHHHHHHhhchhHHhhhhhccCCCCCCCCCccccchhhhhhccccchhhccCCcchHHHHhhhchHHHHHHhhhcc
Q 021158 101 DWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQEPGEIEEEFAQIDTARLMKKFLCLR 180 (316)
Q Consensus 101 S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (316)
|+|+..++.+|.+.| +.++|+.+|..... +-++...
T Consensus 138 SiGt~~tv~Lasr~~--~~alVL~SPf~S~~------------------------------------------rv~~~~~ 173 (258)
T KOG1552|consen 138 SIGTVPTVDLASRYP--LAAVVLHSPFTSGM------------------------------------------RVAFPDT 173 (258)
T ss_pred cCCchhhhhHhhcCC--cceEEEeccchhhh------------------------------------------hhhccCc
Confidence 999999999999998 99999999855321 0010000
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhccCCcCcccccccccccccccccCCCCccccCcEEEEEeCCC
Q 021158 181 IPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFNQKGFTGPVNYYRCWDLNWELMAPWTGVQIKVPVKYIVGDQD 260 (316)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D 260 (316)
... .....+... ... +.|+||+|++||++|
T Consensus 174 ~~~-----------------------------------------~~~d~f~~i---~kI------~~i~~PVLiiHgtdD 203 (258)
T KOG1552|consen 174 KTT-----------------------------------------YCFDAFPNI---EKI------SKITCPVLIIHGTDD 203 (258)
T ss_pred ceE-----------------------------------------Eeecccccc---Ccc------eeccCCEEEEecccC
Confidence 000 000000000 000 188999999999999
Q ss_pred cccCCCCcchhcccccccccccCcccEEEEcCCCcccchhhHHHHHHHHHHHHH
Q 021158 261 LVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQEKAEEVGAHIYEFIK 314 (316)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 314 (316)
.++|....+.++ +..++..+-.++.|+||.-..-. .++.+.+..|+.
T Consensus 204 evv~~sHg~~Ly------e~~k~~~epl~v~g~gH~~~~~~-~~yi~~l~~f~~ 250 (258)
T KOG1552|consen 204 EVVDFSHGKALY------ERCKEKVEPLWVKGAGHNDIELY-PEYIEHLRRFIS 250 (258)
T ss_pred ceecccccHHHH------HhccccCCCcEEecCCCcccccC-HHHHHHHHHHHH
Confidence 999999877643 44444337788999999765444 456667777764
No 66
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.83 E-value=5.8e-20 Score=139.91 Aligned_cols=104 Identities=20% Similarity=0.139 Sum_probs=86.4
Q ss_pred CCeEEEEccCCCc----hhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHH---HHhCCcceE
Q 021158 24 GPAVLFIHGFPEL----WYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLL---DKLGIHQVF 96 (316)
Q Consensus 24 ~p~il~~HG~~~~----~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 96 (316)
.|+||++||++.+ ...|..+++.|+++||+|+++|+||||.|.... ...++..+++|+..++ ++.+.++++
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~--~~~~~~~~~~Dv~~ai~~L~~~~~~~v~ 102 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDF--AAARWDVWKEDVAAAYRWLIEQGHPPVT 102 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCcc--ccCCHHHHHHHHHHHHHHHHhcCCCCEE
Confidence 4689999999864 346777889999999999999999999997654 2446777788877654 444667999
Q ss_pred EEEecHHHHHHHHHHhhchhHHhhhhhccCCCC
Q 021158 97 LVGHDWGALIAWYFCLFRPDRVKALVNMSVPFP 129 (316)
Q Consensus 97 l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 129 (316)
++||||||.+++.++.++|++++++|+++|...
T Consensus 103 LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~ 135 (266)
T TIGR03101 103 LWGLRLGALLALDAANPLAAKCNRLVLWQPVVS 135 (266)
T ss_pred EEEECHHHHHHHHHHHhCccccceEEEeccccc
Confidence 999999999999999999999999999997654
No 67
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.83 E-value=1.7e-19 Score=138.25 Aligned_cols=282 Identities=17% Similarity=0.201 Sum_probs=168.5
Q ss_pred eCCeeEEEEEeCC-----CCeEEEEccCCCchh-----------hhHHhh---hhhhcCCceEEccCCCCCC-CCCCCC-
Q 021158 11 TNGINMHVASIGT-----GPAVLFIHGFPELWY-----------SWRNQL---LYLSSRGYRAIAPDLRGYG-DTDAPP- 69 (316)
Q Consensus 11 ~~g~~l~~~~~g~-----~p~il~~HG~~~~~~-----------~~~~~~---~~l~~~g~~v~~~D~~G~G-~s~~~~- 69 (316)
+++..+.|+++|. ...||++|++.+++. .|+.++ +.+.-..|.|++.|..|.+ .|..+.
T Consensus 33 l~~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s 112 (368)
T COG2021 33 LSDARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSS 112 (368)
T ss_pred ccCcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCC
Confidence 3567788999985 468999999987443 355554 2455455999999999876 443332
Q ss_pred ----------CCcchhHHHHHHHHHHHHHHhCCcceE-EEEecHHHHHHHHHHhhchhHHhhhhhccCCCCCCCCCcccc
Q 021158 70 ----------SVTSYTALHLVGDLIGLLDKLGIHQVF-LVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPL 138 (316)
Q Consensus 70 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~ 138 (316)
+...++++|+++.-..+++++|++++. ++|-||||+.|+.++..+|++|+.+|.++++...........
T Consensus 113 ~~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~ia~~ 192 (368)
T COG2021 113 INPGGKPYGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQNIAFN 192 (368)
T ss_pred cCCCCCccccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHHHHHH
Confidence 123468899999999999999999987 899999999999999999999999999998665433222222
Q ss_pred chhhhhhcc--cc----chhhccCCcc---hHHHH--hhhchHHHHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 021158 139 NNFRAVYGD--DY----YICRFQEPGE---IEEEF--AQIDTARLMKKFLCLRIPKPLCIPKDTGLSTLPDPSALPSWLS 207 (316)
Q Consensus 139 ~~~~~~~~~--~~----~~~~~~~~~~---~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (316)
...+..... .+ |.. -..|.. ....+ ........+..-+...... ...... -.
T Consensus 193 ~~~r~AI~~DP~~n~G~Y~~-~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~---------------~~~~~~-~~ 255 (368)
T COG2021 193 EVQRQAIEADPDWNGGDYYE-GTQPERGLRLARMLAHLTYRSEEELDERFGRRLQA---------------DPLRGG-GV 255 (368)
T ss_pred HHHHHHHHhCCCccCCCccC-CCCcchhHHHHHHHHHHHccCHHHHHHHhcccccc---------------cccCCC-ch
Confidence 222221110 00 111 001110 00000 0111111222222211100 000000 01
Q ss_pred hHHHHHH--------HHhhccCCcCcccccccccccccc-cccCCCCccccCcEEEEEeCCCcccCCCCcchhccccccc
Q 021158 208 EEDVNYY--------ASKFNQKGFTGPVNYYRCWDLNWE-LMAPWTGVQIKVPVKYIVGDQDLVYNNKGTKEYIHNGGFK 278 (316)
Q Consensus 208 ~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~ 278 (316)
...++.| ...++.+.+......+...+.... ......++.+++|++++.-+.|...|++..++ +.
T Consensus 256 ~f~vESYL~~qg~kf~~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~------~~ 329 (368)
T COG2021 256 RFAVESYLDYQGDKFVARFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRA------LA 329 (368)
T ss_pred hHHHHHHHHHHHHHHHhccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHH------HH
Confidence 1222222 223333333333332332222222 11111233899999999999999999987766 66
Q ss_pred ccccCcccEEEEc-CCCcccchhhHHHHHHHHHHHHHh
Q 021158 279 KYVPYLQDVVVME-GVAHFINQEKAEEVGAHIYEFIKK 315 (316)
Q Consensus 279 ~~~~~~~~~~~~~-~~gH~~~~~~~~~~~~~i~~fl~~ 315 (316)
+.++....+++++ ..||..++...+.+...|.+||+.
T Consensus 330 ~~L~~~~~~~~i~S~~GHDaFL~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 330 EALPAAGALREIDSPYGHDAFLVESEAVGPLIRKFLAL 367 (368)
T ss_pred HhccccCceEEecCCCCchhhhcchhhhhHHHHHHhhc
Confidence 7777772376775 459999999999999999999975
No 68
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.83 E-value=3.3e-19 Score=131.64 Aligned_cols=109 Identities=28% Similarity=0.408 Sum_probs=98.4
Q ss_pred eEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCc-ceEEEEecHHH
Q 021158 26 AVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIH-QVFLVGHDWGA 104 (316)
Q Consensus 26 ~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~G~S~Gg 104 (316)
+||-+||.++|...|..+.+.|.+.|.+++.+++||+|.++..++ ..++..+-..-+.++++.++++ +++.+|||.|+
T Consensus 37 TVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~-~~~~n~er~~~~~~ll~~l~i~~~~i~~gHSrGc 115 (297)
T PF06342_consen 37 TVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPD-QQYTNEERQNFVNALLDELGIKGKLIFLGHSRGC 115 (297)
T ss_pred eEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcc-cccChHHHHHHHHHHHHHcCCCCceEEEEeccch
Confidence 899999999999999999999999999999999999999988765 7888899999999999999886 67889999999
Q ss_pred HHHHHHHhhchhHHhhhhhccCCCCCCCCCccc
Q 021158 105 LIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRP 137 (316)
Q Consensus 105 ~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~ 137 (316)
-.|+.++..+| ..|+++++|+.........+
T Consensus 116 enal~la~~~~--~~g~~lin~~G~r~HkgIrp 146 (297)
T PF06342_consen 116 ENALQLAVTHP--LHGLVLINPPGLRPHKGIRP 146 (297)
T ss_pred HHHHHHHhcCc--cceEEEecCCccccccCcCH
Confidence 99999999996 67999999988766554444
No 69
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.83 E-value=4e-20 Score=139.34 Aligned_cols=244 Identities=18% Similarity=0.212 Sum_probs=135.5
Q ss_pred CCeEEEEccCCCchh--hhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHh----CCcceEE
Q 021158 24 GPAVLFIHGFPELWY--SWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKL----GIHQVFL 97 (316)
Q Consensus 24 ~p~il~~HG~~~~~~--~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l 97 (316)
.|.||++||+.+++. ..+.+.+.+.++||.||++|+|||+.+..... .-+.. -+.+|+..+++.+ ...++..
T Consensus 75 ~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p-~~yh~-G~t~D~~~~l~~l~~~~~~r~~~a 152 (345)
T COG0429 75 KPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSP-RLYHS-GETEDIRFFLDWLKARFPPRPLYA 152 (345)
T ss_pred CceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCc-ceecc-cchhHHHHHHHHHHHhCCCCceEE
Confidence 589999999976543 34667889999999999999999998876331 11211 1124555555444 5568999
Q ss_pred EEecHHHHHHHHHHhhchh--HHhhhhhccCCCCCCCCCccccchhhhhhccccchhhccCCcchHHHHhhhchHHHHHH
Q 021158 98 VGHDWGALIAWYFCLFRPD--RVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQEPGEIEEEFAQIDTARLMKK 175 (316)
Q Consensus 98 ~G~S~Gg~~a~~~a~~~p~--~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (316)
+|.|+||.+...+..+..+ .+.+.+.++.+...... ...+...+. ...+.. .....+.+
T Consensus 153 vG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~--------~~~l~~~~s----------~~ly~r-~l~~~L~~ 213 (345)
T COG0429 153 VGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEAC--------AYRLDSGFS----------LRLYSR-YLLRNLKR 213 (345)
T ss_pred EEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHH--------HHHhcCchh----------hhhhHH-HHHHHHHH
Confidence 9999999444444443322 35555555544332110 000000000 000000 01111111
Q ss_pred hhhccCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHH--hh------ccCCcCcccccccccccccccccCCCCcc
Q 021158 176 FLCLRIPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYAS--KF------NQKGFTGPVNYYRCWDLNWELMAPWTGVQ 247 (316)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (316)
......... . ...+... .+.++...+ .+ ...++.+...+|+.......+. +
T Consensus 214 ~~~~kl~~l----~----------~~~p~~~-~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~------~ 272 (345)
T COG0429 214 NAARKLKEL----E----------PSLPGTV-LAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLLP------K 272 (345)
T ss_pred HHHHHHHhc----C----------cccCcHH-HHHHHhhchHHhccceeeecccCCCcHHHHHHhcccccccc------c
Confidence 111100000 0 0000000 111111111 11 2234556666666666555554 9
Q ss_pred ccCcEEEEEeCCCcccCCCCcchhcccccccccccCcccEEEEcCCCcccchh----hHH-HHHHHHHHHHHh
Q 021158 248 IKVPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQE----KAE-EVGAHIYEFIKK 315 (316)
Q Consensus 248 i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~----~~~-~~~~~i~~fl~~ 315 (316)
|.+|+|+|+..+|++++++..... .....|++ .+..-+.+||..++. +|. ...+.+.+|++.
T Consensus 273 Ir~PtLii~A~DDP~~~~~~iP~~-----~~~~np~v-~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~ 339 (345)
T COG0429 273 IRKPTLIINAKDDPFMPPEVIPKL-----QEMLNPNV-LLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDP 339 (345)
T ss_pred cccceEEEecCCCCCCChhhCCcc-----hhcCCCce-EEEeecCCceEEeccCccccchhhHHHHHHHHHHH
Confidence 999999999999999999776542 22267788 888889999988777 343 556777777754
No 70
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.82 E-value=1.2e-19 Score=131.29 Aligned_cols=223 Identities=18% Similarity=0.203 Sum_probs=147.2
Q ss_pred CCeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHH-HhCCcceEEEEecH
Q 021158 24 GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLD-KLGIHQVFLVGHDW 102 (316)
Q Consensus 24 ~p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~G~S~ 102 (316)
.+.++++|-.|+++..|+++...|... +.++++.+||+|..-..+ ...+++.+++.+...+. -...+++.++||||
T Consensus 7 ~~~L~cfP~AGGsa~~fr~W~~~lp~~-iel~avqlPGR~~r~~ep--~~~di~~Lad~la~el~~~~~d~P~alfGHSm 83 (244)
T COG3208 7 RLRLFCFPHAGGSASLFRSWSRRLPAD-IELLAVQLPGRGDRFGEP--LLTDIESLADELANELLPPLLDAPFALFGHSM 83 (244)
T ss_pred CceEEEecCCCCCHHHHHHHHhhCCch-hheeeecCCCcccccCCc--ccccHHHHHHHHHHHhccccCCCCeeecccch
Confidence 568999999999999999999988875 999999999999775555 56789999999988888 45557899999999
Q ss_pred HHHHHHHHHhhchh---HHhhhhhccCCCCCCCCCccccchhhhhhccccchhhccCCcchHHHHhhhchHHHHHHhhhc
Q 021158 103 GALIAWYFCLFRPD---RVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQEPGEIEEEFAQIDTARLMKKFLCL 179 (316)
Q Consensus 103 Gg~~a~~~a~~~p~---~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (316)
||++|.++|.+... ...++.+.++....... .+.+...+...+++.+...
T Consensus 84 Ga~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~---------------------------~~~i~~~~D~~~l~~l~~l 136 (244)
T COG3208 84 GAMLAFEVARRLERAGLPPRALFISGCRAPHYDR---------------------------GKQIHHLDDADFLADLVDL 136 (244)
T ss_pred hHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcc---------------------------cCCccCCCHHHHHHHHHHh
Confidence 99999999987533 13444444432221100 0011122233444444443
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhccCCcCcccccccccccccccccCCCCccccCcEEEEEeCC
Q 021158 180 RIPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFNQKGFTGPVNYYRCWDLNWELMAPWTGVQIKVPVKYIVGDQ 259 (316)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~ 259 (316)
.... +..+.+.++..+.....++.+...-. |+.. ... .++||+..+.|++
T Consensus 137 gG~p-------------------~e~led~El~~l~LPilRAD~~~~e~-Y~~~------~~~----pl~~pi~~~~G~~ 186 (244)
T COG3208 137 GGTP-------------------PELLEDPELMALFLPILRADFRALES-YRYP------PPA----PLACPIHAFGGEK 186 (244)
T ss_pred CCCC-------------------hHHhcCHHHHHHHHHHHHHHHHHhcc-cccC------CCC----CcCcceEEeccCc
Confidence 2221 11122233333332222221111100 1111 111 8899999999999
Q ss_pred CcccCCCCcchhccccccccccc-CcccEEEEcCCCcccchhhHHHHHHHHHHHHH
Q 021158 260 DLVYNNKGTKEYIHNGGFKKYVP-YLQDVVVMEGVAHFINQEKAEEVGAHIYEFIK 314 (316)
Q Consensus 260 D~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 314 (316)
|..++.+....| .+... .. ++.+|+| ||+...++.+++.+.|.+.+.
T Consensus 187 D~~vs~~~~~~W------~~~t~~~f-~l~~fdG-gHFfl~~~~~~v~~~i~~~l~ 234 (244)
T COG3208 187 DHEVSRDELGAW------REHTKGDF-TLRVFDG-GHFFLNQQREEVLARLEQHLA 234 (244)
T ss_pred chhccHHHHHHH------HHhhcCCc-eEEEecC-cceehhhhHHHHHHHHHHHhh
Confidence 999998877654 34444 45 9999998 999999999999999998874
No 71
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.82 E-value=1.1e-19 Score=136.74 Aligned_cols=195 Identities=20% Similarity=0.244 Sum_probs=119.6
Q ss_pred hHHhhhhhhcCCceEEccCCCCCCCCCCC------CCCcchhHHHHHHHHHHHHHHh--CCcceEEEEecHHHHHHHHHH
Q 021158 40 WRNQLLYLSSRGYRAIAPDLRGYGDTDAP------PSVTSYTALHLVGDLIGLLDKL--GIHQVFLVGHDWGALIAWYFC 111 (316)
Q Consensus 40 ~~~~~~~l~~~g~~v~~~D~~G~G~s~~~------~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a 111 (316)
|......|+++||.|+.+|+||.+..... ........+|..+.+..+++.- +.+++.++|+|+||.+++.++
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~ 82 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAA 82 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHH
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhh
Confidence 45567789999999999999998743211 1112233444444444444443 345899999999999999999
Q ss_pred hhchhHHhhhhhccCCCCCCCCCccccchhhhhhccccchhhccCCcchHHHHhhhchHHHHH-HhhhccCCCCCCCCCC
Q 021158 112 LFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQEPGEIEEEFAQIDTARLMK-KFLCLRIPKPLCIPKD 190 (316)
Q Consensus 112 ~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 190 (316)
.++|++++++|..++............. +.. .......+
T Consensus 83 ~~~~~~f~a~v~~~g~~d~~~~~~~~~~--------------------------------~~~~~~~~~~~~-------- 122 (213)
T PF00326_consen 83 TQHPDRFKAAVAGAGVSDLFSYYGTTDI--------------------------------YTKAEYLEYGDP-------- 122 (213)
T ss_dssp HHTCCGSSEEEEESE-SSTTCSBHHTCC--------------------------------HHHGHHHHHSST--------
T ss_pred cccceeeeeeeccceecchhcccccccc--------------------------------cccccccccCcc--------
Confidence 9999999999988887654322100000 000 00000000
Q ss_pred CCCCCCCCCCCCCCCCChHHHHHHHHhhccCCcCcccccccccccccccccCCCCcc--ccCcEEEEEeCCCcccCCCCc
Q 021158 191 TGLSTLPDPSALPSWLSEEDVNYYASKFNQKGFTGPVNYYRCWDLNWELMAPWTGVQ--IKVPVKYIVGDQDLVYNNKGT 268 (316)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--i~~Pvl~i~G~~D~~~~~~~~ 268 (316)
+...+........ .... + +++|+|+++|++|..||++.+
T Consensus 123 --------------~~~~~~~~~~s~~-------------------~~~~------~~~~~~P~li~hG~~D~~Vp~~~s 163 (213)
T PF00326_consen 123 --------------WDNPEFYRELSPI-------------------SPAD------NVQIKPPVLIIHGENDPRVPPSQS 163 (213)
T ss_dssp --------------TTSHHHHHHHHHG-------------------GGGG------GCGGGSEEEEEEETTBSSSTTHHH
T ss_pred --------------chhhhhhhhhccc-------------------cccc------cccCCCCEEEEccCCCCccCHHHH
Confidence 0001111111100 0000 4 789999999999999999988
Q ss_pred chhcccccccccccCcccEEEEcCCCcccc-hhhHHHHHHHHHHHHHhC
Q 021158 269 KEYIHNGGFKKYVPYLQDVVVMEGVAHFIN-QEKAEEVGAHIYEFIKKF 316 (316)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~~i~~fl~~~ 316 (316)
..++ +.+.+..... ++.++|++||... .+...+..+.+.+||+++
T Consensus 164 ~~~~--~~L~~~g~~~-~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~ 209 (213)
T PF00326_consen 164 LRLY--NALRKAGKPV-ELLIFPGEGHGFGNPENRRDWYERILDFFDKY 209 (213)
T ss_dssp HHHH--HHHHHTTSSE-EEEEETT-SSSTTSHHHHHHHHHHHHHHHHHH
T ss_pred HHHH--HHHHhcCCCE-EEEEcCcCCCCCCCchhHHHHHHHHHHHHHHH
Confidence 7765 4455555567 9999999999554 456678899999999763
No 72
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.82 E-value=2e-19 Score=154.59 Aligned_cols=223 Identities=21% Similarity=0.233 Sum_probs=142.0
Q ss_pred CCeeEEEEEeCC---C-----CeEEEEccCCCchhh--hHHhhhhhhcCCceEEccCCCCCCCCC---CC---CCCcchh
Q 021158 12 NGINMHVASIGT---G-----PAVLFIHGFPELWYS--WRNQLLYLSSRGYRAIAPDLRGYGDTD---AP---PSVTSYT 75 (316)
Q Consensus 12 ~g~~l~~~~~g~---~-----p~il~~HG~~~~~~~--~~~~~~~l~~~g~~v~~~D~~G~G~s~---~~---~~~~~~~ 75 (316)
||.+++.....+ + |+||++||.+..... |......|+.+||.|+.+|.||.+.-. .. .+.....
T Consensus 374 dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~~~g~~~ 453 (620)
T COG1506 374 DGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIRGDWGGVD 453 (620)
T ss_pred CCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhhhccCCcc
Confidence 788888765542 2 799999999865444 667788999999999999999765421 11 1112345
Q ss_pred HHHHHHHHHHHHHHhC---CcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCCCCCCccccchhhhhhccccchh
Q 021158 76 ALHLVGDLIGLLDKLG---IHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYIC 152 (316)
Q Consensus 76 ~~~~~~~~~~~~~~~~---~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (316)
.+|+.+.+. ++...+ -+++.++|||+||.+++.++.+.| .+++.+...++..........
T Consensus 454 ~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~~~~~~~--------------- 516 (620)
T COG1506 454 LEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLLYFGES--------------- 516 (620)
T ss_pred HHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhhhhcccc---------------
Confidence 666666666 454443 248999999999999999999998 677766665543211000000
Q ss_pred hccCCcchHHHHhhhchHHHHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhccCCcCcccccccc
Q 021158 153 RFQEPGEIEEEFAQIDTARLMKKFLCLRIPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFNQKGFTGPVNYYRC 232 (316)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (316)
...+. ........ .+.+ ....|...
T Consensus 517 ----------------~~~~~-~~~~~~~~-------------------~~~~----~~~~~~~~--------------- 541 (620)
T COG1506 517 ----------------TEGLR-FDPEENGG-------------------GPPE----DREKYEDR--------------- 541 (620)
T ss_pred ----------------chhhc-CCHHHhCC-------------------Cccc----ChHHHHhc---------------
Confidence 00000 00000000 0000 00111110
Q ss_pred cccccccccCCCCccccCcEEEEEeCCCcccCCCCcchhcccccccccccCcccEEEEcCCCcccch-hhHHHHHHHHHH
Q 021158 233 WDLNWELMAPWTGVQIKVPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQ-EKAEEVGAHIYE 311 (316)
Q Consensus 233 ~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~ 311 (316)
.... .. .++++|+|+|||++|..||.+.+..++ +.++....+. +++++|+.+|.+.. ++...+.+.+.+
T Consensus 542 -sp~~--~~----~~i~~P~LliHG~~D~~v~~~q~~~~~--~aL~~~g~~~-~~~~~p~e~H~~~~~~~~~~~~~~~~~ 611 (620)
T COG1506 542 -SPIF--YA----DNIKTPLLLIHGEEDDRVPIEQAEQLV--DALKRKGKPV-ELVVFPDEGHGFSRPENRVKVLKEILD 611 (620)
T ss_pred -Chhh--hh----cccCCCEEEEeecCCccCChHHHHHHH--HHHHHcCceE-EEEEeCCCCcCCCCchhHHHHHHHHHH
Confidence 0000 01 189999999999999999999888776 5566666677 99999999997765 567778888899
Q ss_pred HHHhC
Q 021158 312 FIKKF 316 (316)
Q Consensus 312 fl~~~ 316 (316)
|++++
T Consensus 612 ~~~~~ 616 (620)
T COG1506 612 WFKRH 616 (620)
T ss_pred HHHHH
Confidence 98764
No 73
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.81 E-value=3.4e-20 Score=130.24 Aligned_cols=209 Identities=17% Similarity=0.227 Sum_probs=135.7
Q ss_pred eCCeeEEEE-Ee--CCCCeEEEEccCCCchhhhHHhhhhh-hcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHH
Q 021158 11 TNGINMHVA-SI--GTGPAVLFIHGFPELWYSWRNQLLYL-SSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGL 86 (316)
Q Consensus 11 ~~g~~l~~~-~~--g~~p~il~~HG~~~~~~~~~~~~~~l-~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~ 86 (316)
-|..+++-. .. .+.|+++.+|+..++.....+.++-+ ..-+.+|+.+++||+|.|...+.... +.-|...+
T Consensus 62 ~D~vtL~a~~~~~E~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE~G-----L~lDs~av 136 (300)
T KOG4391|consen 62 RDKVTLDAYLMLSESSRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSEEG-----LKLDSEAV 136 (300)
T ss_pred CcceeEeeeeecccCCCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCccccc-----eeccHHHH
Confidence 366666533 22 25799999999999988877777644 34478999999999999998874222 22233444
Q ss_pred HHHh------CCcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCCCCCCccccchhhhhhccccchhhccCCcch
Q 021158 87 LDKL------GIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQEPGEI 160 (316)
Q Consensus 87 ~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (316)
++.+ +..+++++|.|+||.+|+.+|++..+++.++|+-++....+....... .|
T Consensus 137 ldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~~v-----------------~p--- 196 (300)
T KOG4391|consen 137 LDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIPLV-----------------FP--- 196 (300)
T ss_pred HHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhhhee-----------------cc---
Confidence 4443 445899999999999999999999999999998886554311100000 00
Q ss_pred HHHHhhhchHHHHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhccCCcCcccccccccccccccc
Q 021158 161 EEEFAQIDTARLMKKFLCLRIPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFNQKGFTGPVNYYRCWDLNWELM 240 (316)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (316)
. ..+.+..+... ..+.. ++..
T Consensus 197 ------~-~~k~i~~lc~k------------------------------------n~~~S---------~~ki------- 217 (300)
T KOG4391|consen 197 ------F-PMKYIPLLCYK------------------------------------NKWLS---------YRKI------- 217 (300)
T ss_pred ------c-hhhHHHHHHHH------------------------------------hhhcc---------hhhh-------
Confidence 0 00001111000 00000 0000
Q ss_pred cCCCCccccCcEEEEEeCCCcccCCCCcchhcccccccccccC-cccEEEEcCCCcccchhhHHHHHHHHHHHHHh
Q 021158 241 APWTGVQIKVPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYVPY-LQDVVVMEGVAHFINQEKAEEVGAHIYEFIKK 315 (316)
Q Consensus 241 ~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 315 (316)
.+-+.|.|+|.|..|.++||..++.++ ...|. .|++.+||++.|.-..- .+-..+.|.+||.+
T Consensus 218 -----~~~~~P~LFiSGlkDelVPP~~Mr~Ly------~~c~S~~Krl~eFP~gtHNDT~i-~dGYfq~i~dFlaE 281 (300)
T KOG4391|consen 218 -----GQCRMPFLFISGLKDELVPPVMMRQLY------ELCPSRTKRLAEFPDGTHNDTWI-CDGYFQAIEDFLAE 281 (300)
T ss_pred -----ccccCceEEeecCccccCCcHHHHHHH------HhCchhhhhheeCCCCccCceEE-eccHHHHHHHHHHH
Confidence 055789999999999999999887754 44443 35899999999964432 25677788888865
No 74
>PLN02442 S-formylglutathione hydrolase
Probab=99.81 E-value=1.1e-18 Score=136.13 Aligned_cols=106 Identities=21% Similarity=0.255 Sum_probs=76.3
Q ss_pred CCeEEEEccCCCchhhhHH---hhhhhhcCCceEEccCCCCCCCC-----CC-------------CC------CCcchhH
Q 021158 24 GPAVLFIHGFPELWYSWRN---QLLYLSSRGYRAIAPDLRGYGDT-----DA-------------PP------SVTSYTA 76 (316)
Q Consensus 24 ~p~il~~HG~~~~~~~~~~---~~~~l~~~g~~v~~~D~~G~G~s-----~~-------------~~------~~~~~~~ 76 (316)
.|+|+++||++++...|.. +...+...|+.|+.+|.+++|.. .. .. ....+-.
T Consensus 47 ~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (283)
T PLN02442 47 VPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYVV 126 (283)
T ss_pred CCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhhhHH
Confidence 4899999999988877744 34566777999999998876621 10 00 0001123
Q ss_pred HHHHHHHHHHHHHhCCcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCC
Q 021158 77 LHLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFP 129 (316)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 129 (316)
+++.+.+....+.++.++++++||||||..|+.++.++|+++++++.+++...
T Consensus 127 ~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~ 179 (283)
T PLN02442 127 KELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIAN 179 (283)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccC
Confidence 34444444444556778899999999999999999999999999998887654
No 75
>PLN00021 chlorophyllase
Probab=99.81 E-value=8.9e-19 Score=137.19 Aligned_cols=104 Identities=23% Similarity=0.325 Sum_probs=76.1
Q ss_pred CCCeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHH-------hCCcce
Q 021158 23 TGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDK-------LGIHQV 95 (316)
Q Consensus 23 ~~p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~ 95 (316)
+.|+||++||++.+...|..+++.|+++||.|+++|++|++.+.... ...+..+..+.+.+.++. .+.+++
T Consensus 51 ~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~~~~~--~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v 128 (313)
T PLN00021 51 TYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGPDGTD--EIKDAAAVINWLSSGLAAVLPEGVRPDLSKL 128 (313)
T ss_pred CCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCCCchh--hHHHHHHHHHHHHhhhhhhcccccccChhhe
Confidence 46899999999999999999999999999999999999875432211 111223333333332222 234689
Q ss_pred EEEEecHHHHHHHHHHhhchh-----HHhhhhhccCCC
Q 021158 96 FLVGHDWGALIAWYFCLFRPD-----RVKALVNMSVPF 128 (316)
Q Consensus 96 ~l~G~S~Gg~~a~~~a~~~p~-----~v~~~il~~~~~ 128 (316)
+++|||+||.+++.+|..+++ +++++|+++|..
T Consensus 129 ~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~ 166 (313)
T PLN00021 129 ALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVD 166 (313)
T ss_pred EEEEECcchHHHHHHHhhccccccccceeeEEeecccc
Confidence 999999999999999998874 467788777654
No 76
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.80 E-value=1.8e-18 Score=129.55 Aligned_cols=263 Identities=17% Similarity=0.192 Sum_probs=145.6
Q ss_pred EEEeCCeeEEEEEeCC----CCeEEEEccCCCchhh-hHHhh-----hhhhcCCceEEccCCCCCCCCCC--CCCCcchh
Q 021158 8 TVATNGINMHVASIGT----GPAVLFIHGFPELWYS-WRNQL-----LYLSSRGYRAIAPDLRGYGDTDA--PPSVTSYT 75 (316)
Q Consensus 8 ~~~~~g~~l~~~~~g~----~p~il~~HG~~~~~~~-~~~~~-----~~l~~~g~~v~~~D~~G~G~s~~--~~~~~~~~ 75 (316)
.++..-..+++...|+ +|++|-.|..|.+... |..+. ..+.++ |.++-+|.||+..... +.+....+
T Consensus 3 ~v~t~~G~v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~-f~i~Hi~aPGqe~ga~~~p~~y~yPs 81 (283)
T PF03096_consen 3 DVETPYGSVHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQN-FCIYHIDAPGQEEGAATLPEGYQYPS 81 (283)
T ss_dssp EEEETTEEEEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTT-SEEEEEE-TTTSTT-----TT-----
T ss_pred eeccCceEEEEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHHhhc-eEEEEEeCCCCCCCcccccccccccC
Confidence 4566667888888874 6999999999988776 77664 456666 9999999999965543 33334668
Q ss_pred HHHHHHHHHHHHHHhCCcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCCCCCCccccchhhhhhccccchhhcc
Q 021158 76 ALHLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQ 155 (316)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (316)
.+++++++.+++++++++.++.+|...||.+..++|..+|++|.|+||+++.........+....+. .. .+....
T Consensus 82 md~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw~Ew~~~K~~---~~--~L~~~g 156 (283)
T PF03096_consen 82 MDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGWMEWFYQKLS---SW--LLYSYG 156 (283)
T ss_dssp HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---HHHHHHHHHH------------C
T ss_pred HHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccHHHHHHHHHh---cc--cccccc
Confidence 9999999999999999999999999999999999999999999999999987765332111111111 00 000001
Q ss_pred CCcchHHHHhhhchHHHHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhcc-CCcCcccccccccc
Q 021158 156 EPGEIEEEFAQIDTARLMKKFLCLRIPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFNQ-KGFTGPVNYYRCWD 234 (316)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 234 (316)
...... .-++...+...... -..+.++.|...+.. .+......++....
T Consensus 157 mt~~~~--------d~Ll~h~Fg~~~~~----------------------~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~ 206 (283)
T PF03096_consen 157 MTSSVK--------DYLLWHYFGKEEEE----------------------NNSDLVQTYRQHLDERINPKNLALFLNSYN 206 (283)
T ss_dssp TTS-HH--------HHHHHHHS-HHHHH----------------------CT-HHHHHHHHHHHT-TTHHHHHHHHHHHH
T ss_pred cccchH--------Hhhhhccccccccc----------------------ccHHHHHHHHHHHhcCCCHHHHHHHHHHHh
Confidence 111111 11111122111000 011334444444332 22222333333333
Q ss_pred cccccccCCCCccccCcEEEEEeCCCcccCCCCcchhcccccccccccCcccEEEEcCCCcccchhhHHHHHHHHHHHHH
Q 021158 235 LNWELMAPWTGVQIKVPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQEKAEEVGAHIYEFIK 314 (316)
Q Consensus 235 ~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 314 (316)
.+.++.... ....||+|++.|+..+..... .+. ..+..|...++..++++|=++..|+|+.+++.+.-|++
T Consensus 207 ~R~DL~~~~--~~~~c~vLlvvG~~Sp~~~~v--v~~-----ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFlQ 277 (283)
T PF03096_consen 207 SRTDLSIER--PSLGCPVLLVVGDNSPHVDDV--VEM-----NSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQ 277 (283)
T ss_dssp T-----SEC--TTCCS-EEEEEETTSTTHHHH--HHH-----HHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHH
T ss_pred ccccchhhc--CCCCCCeEEEEecCCcchhhH--HHH-----HhhcCcccceEEEecccCCcccccCcHHHHHHHHHHHc
Confidence 332222211 166799999999998776532 121 22333443388999999999999999999999999997
Q ss_pred h
Q 021158 315 K 315 (316)
Q Consensus 315 ~ 315 (316)
.
T Consensus 278 G 278 (283)
T PF03096_consen 278 G 278 (283)
T ss_dssp H
T ss_pred c
Confidence 4
No 77
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.80 E-value=3.1e-18 Score=134.07 Aligned_cols=266 Identities=18% Similarity=0.205 Sum_probs=146.8
Q ss_pred ceeEEEe-CCeeEEEEE--e---------CCCCeEEEEccCCCchhh--hHHhhhhhhcCCceEEccCCCCCCCCCCCCC
Q 021158 5 EHTTVAT-NGINMHVAS--I---------GTGPAVLFIHGFPELWYS--WRNQLLYLSSRGYRAIAPDLRGYGDTDAPPS 70 (316)
Q Consensus 5 ~~~~~~~-~g~~l~~~~--~---------g~~p~il~~HG~~~~~~~--~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~ 70 (316)
++..++. ||..+.+-- . +..|+||++||+.+++.. ...++..+.+.||+|++++.||+|.|.-...
T Consensus 94 ~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTp 173 (409)
T KOG1838|consen 94 TREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTP 173 (409)
T ss_pred eeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCCC
Confidence 3444555 676665421 1 235999999999765433 3567778888899999999999999876542
Q ss_pred CcchhHHHHHHHHHHHHHHh----CCcceEEEEecHHHHHHHHHHhhchh--HHhhhhhccCCCCCCCCCccccchhhhh
Q 021158 71 VTSYTALHLVGDLIGLLDKL----GIHQVFLVGHDWGALIAWYFCLFRPD--RVKALVNMSVPFPPRNPAVRPLNNFRAV 144 (316)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~--~v~~~il~~~~~~~~~~~~~~~~~~~~~ 144 (316)
..++ .-+.+|+.++++++ ...++..+|.||||.+.+.+..+..+ .+.+.+.++.+...-.. . ..+..
T Consensus 174 -r~f~-ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~-~---~~~~~- 246 (409)
T KOG1838|consen 174 -RLFT-AGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAA-S---RSIET- 246 (409)
T ss_pred -ceee-cCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhh-h---hHHhc-
Confidence 2222 22344555555544 55689999999999999999987654 24444445444332100 0 00000
Q ss_pred hccccchhhccCCcchHHHHhhhchHHHHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhc--cCC
Q 021158 145 YGDDYYICRFQEPGEIEEEFAQIDTARLMKKFLCLRIPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFN--QKG 222 (316)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 222 (316)
.. ....+..... .-+.+++..... .........+. -.....++.+...+. .-+
T Consensus 247 ----------~~---~~~~y~~~l~-~~l~~~~~~~r~--~~~~~~vd~d~---------~~~~~SvreFD~~~t~~~~g 301 (409)
T KOG1838|consen 247 ----------PL---YRRFYNRALT-LNLKRIVLRHRH--TLFEDPVDFDV---------ILKSRSVREFDEALTRPMFG 301 (409)
T ss_pred ----------cc---chHHHHHHHH-HhHHHHHhhhhh--hhhhccchhhh---------hhhcCcHHHHHhhhhhhhcC
Confidence 00 0000000000 001111110000 00000000000 011123334443333 235
Q ss_pred cCcccccccccccccccccCCCCccccCcEEEEEeCCCcccCCCCcchhcccccccccccCcccEEEEcCCCcccchhh-
Q 021158 223 FTGPVNYYRCWDLNWELMAPWTGVQIKVPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQEK- 301 (316)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~- 301 (316)
+.....+|+......... +|++|+|+|++.+|+++|++..-. ...+..|+. -+++-..+||..++|.
T Consensus 302 f~~~deYY~~aSs~~~v~------~I~VP~L~ina~DDPv~p~~~ip~-----~~~~~np~v-~l~~T~~GGHlgfleg~ 369 (409)
T KOG1838|consen 302 FKSVDEYYKKASSSNYVD------KIKVPLLCINAADDPVVPEEAIPI-----DDIKSNPNV-LLVITSHGGHLGFLEGL 369 (409)
T ss_pred CCcHHHHHhhcchhhhcc------cccccEEEEecCCCCCCCcccCCH-----HHHhcCCcE-EEEEeCCCceeeeeccC
Confidence 566667777666665555 999999999999999999875532 134556676 6666677799998885
Q ss_pred ---HHHHHHH-HHHHHH
Q 021158 302 ---AEEVGAH-IYEFIK 314 (316)
Q Consensus 302 ---~~~~~~~-i~~fl~ 314 (316)
+....+. +.+|+.
T Consensus 370 ~p~~~~w~~~~l~ef~~ 386 (409)
T KOG1838|consen 370 WPSARTWMDKLLVEFLG 386 (409)
T ss_pred CCccchhHHHHHHHHHH
Confidence 2223333 556654
No 78
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.79 E-value=1.2e-17 Score=123.17 Aligned_cols=268 Identities=18% Similarity=0.206 Sum_probs=168.6
Q ss_pred ceeEEEeCCeeEEEEEeCC----CCeEEEEccCCCchhh-hHHh-----hhhhhcCCceEEccCCCCCCCCCC--CCCCc
Q 021158 5 EHTTVATNGINMHVASIGT----GPAVLFIHGFPELWYS-WRNQ-----LLYLSSRGYRAIAPDLRGYGDTDA--PPSVT 72 (316)
Q Consensus 5 ~~~~~~~~g~~l~~~~~g~----~p~il~~HG~~~~~~~-~~~~-----~~~l~~~g~~v~~~D~~G~G~s~~--~~~~~ 72 (316)
++..++..-..+++...|+ +|++|-.|.++.+... |..+ +..+.++ |.++-+|.|||-.... +.+..
T Consensus 23 ~e~~V~T~~G~v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~~p~~y~ 101 (326)
T KOG2931|consen 23 QEHDVETAHGVVHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPSFPEGYP 101 (326)
T ss_pred eeeeeccccccEEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCccCCCCCC
Confidence 3444555556677777763 6899999999987766 6655 3567777 9999999999955433 33334
Q ss_pred chhHHHHHHHHHHHHHHhCCcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCCCCCCccccchhhhhhccccchh
Q 021158 73 SYTALHLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYIC 152 (316)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (316)
..+.++++++|..++++++.+.++-+|...|+.+..++|..||++|-|+||+++.........+....+.
T Consensus 102 yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~gwiew~~~K~~---------- 171 (326)
T KOG2931|consen 102 YPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKGWIEWAYNKVS---------- 171 (326)
T ss_pred CCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCchHHHHHHHHHH----------
Confidence 5689999999999999999999999999999999999999999999999999987665432211111111
Q ss_pred hccCCcchHHHHhhhchHHHHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhccCC-cCccccccc
Q 021158 153 RFQEPGEIEEEFAQIDTARLMKKFLCLRIPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFNQKG-FTGPVNYYR 231 (316)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 231 (316)
...+........+..++-.......... -..+.++.|...+.... ..+...++.
T Consensus 172 --------s~~l~~~Gmt~~~~d~ll~H~Fg~e~~~-----------------~~~diVq~Yr~~l~~~~N~~Nl~~fl~ 226 (326)
T KOG2931|consen 172 --------SNLLYYYGMTQGVKDYLLAHHFGKEELG-----------------NNSDIVQEYRQHLGERLNPKNLALFLN 226 (326)
T ss_pred --------HHHHHhhchhhhHHHHHHHHHhcccccc-----------------ccHHHHHHHHHHHHhcCChhHHHHHHH
Confidence 0111111222222222222111100000 02344555554443321 122222333
Q ss_pred ccccccccccCCC--CccccCcEEEEEeCCCcccCCCCcchhcccccccccccCcccEEEEcCCCcccchhhHHHHHHHH
Q 021158 232 CWDLNWELMAPWT--GVQIKVPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQEKAEEVGAHI 309 (316)
Q Consensus 232 ~~~~~~~~~~~~~--~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i 309 (316)
+...+.++..... ...++||+|++.|++.+.+..-. +. -.+.-|.-.++..+.++|-.+..++|..+.+.+
T Consensus 227 ayn~R~DL~~~r~~~~~tlkc~vllvvGd~Sp~~~~vv--~~-----n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~ 299 (326)
T KOG2931|consen 227 AYNGRRDLSIERPKLGTTLKCPVLLVVGDNSPHVSAVV--EC-----NSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAF 299 (326)
T ss_pred HhcCCCCccccCCCcCccccccEEEEecCCCchhhhhh--hh-----hcccCcccceEEEEcccCCcccccCchHHHHHH
Confidence 3333333222111 11567999999999987765321 11 122223322788889999999999999999999
Q ss_pred HHHHHh
Q 021158 310 YEFIKK 315 (316)
Q Consensus 310 ~~fl~~ 315 (316)
.-|++.
T Consensus 300 ~~FlqG 305 (326)
T KOG2931|consen 300 KYFLQG 305 (326)
T ss_pred HHHHcc
Confidence 999864
No 79
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.79 E-value=9e-18 Score=130.90 Aligned_cols=106 Identities=22% Similarity=0.300 Sum_probs=77.2
Q ss_pred CCeEEEEccCCCchhhhHHh--hhhh-hcCCceEEccCC--CCCCCCCCCC------------------CCcchhH-HHH
Q 021158 24 GPAVLFIHGFPELWYSWRNQ--LLYL-SSRGYRAIAPDL--RGYGDTDAPP------------------SVTSYTA-LHL 79 (316)
Q Consensus 24 ~p~il~~HG~~~~~~~~~~~--~~~l-~~~g~~v~~~D~--~G~G~s~~~~------------------~~~~~~~-~~~ 79 (316)
.|+|+++||.+++...|... +..+ .+.|+.|+++|. +|+|.+.... ....+.. ..+
T Consensus 42 ~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~ 121 (275)
T TIGR02821 42 VPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSYI 121 (275)
T ss_pred CCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHHHH
Confidence 58999999999988888543 2334 456899999998 5555332100 0011222 334
Q ss_pred HHHHHHHHHH---hCCcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCC
Q 021158 80 VGDLIGLLDK---LGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFP 129 (316)
Q Consensus 80 ~~~~~~~~~~---~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 129 (316)
++++..+++. ++.++++++||||||.+|+.++.++|+.+++++++++...
T Consensus 122 ~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~ 174 (275)
T TIGR02821 122 VQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVA 174 (275)
T ss_pred HHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccC
Confidence 6777777776 3556899999999999999999999999999998887654
No 80
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.78 E-value=8.3e-19 Score=143.73 Aligned_cols=103 Identities=14% Similarity=0.168 Sum_probs=84.0
Q ss_pred CCeEEEEccCCCchhhh-----HHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHh----CCcc
Q 021158 24 GPAVLFIHGFPELWYSW-----RNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKL----GIHQ 94 (316)
Q Consensus 24 ~p~il~~HG~~~~~~~~-----~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 94 (316)
++|||+++.+-.....+ ..++++|.++||.|+.+|+++-+.++. ..+++++++.+.+.++.+ |.++
T Consensus 215 ~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~r-----~~~ldDYv~~i~~Ald~V~~~tG~~~ 289 (560)
T TIGR01839 215 ARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAHR-----EWGLSTYVDALKEAVDAVRAITGSRD 289 (560)
T ss_pred CCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhhc-----CCCHHHHHHHHHHHHHHHHHhcCCCC
Confidence 57999999988766666 578999999999999999998776643 456677776666666554 7789
Q ss_pred eEEEEecHHHHHHHH----HHhhchh-HHhhhhhccCCCCCC
Q 021158 95 VFLVGHDWGALIAWY----FCLFRPD-RVKALVNMSVPFPPR 131 (316)
Q Consensus 95 ~~l~G~S~Gg~~a~~----~a~~~p~-~v~~~il~~~~~~~~ 131 (316)
+.++|+|+||.+++. +++++++ +|++++++.++....
T Consensus 290 vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~ 331 (560)
T TIGR01839 290 LNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDST 331 (560)
T ss_pred eeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccC
Confidence 999999999999987 7888886 799999999887754
No 81
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.77 E-value=6.4e-18 Score=128.44 Aligned_cols=293 Identities=19% Similarity=0.310 Sum_probs=174.2
Q ss_pred CceeEEEeCCeeEEEEEeCC-------C-CeEEEEccCCCchhhhHHhhhhhhcC---C------ceEEccCCCCCCCCC
Q 021158 4 IEHTTVATNGINMHVASIGT-------G-PAVLFIHGFPELWYSWRNQLLYLSSR---G------YRAIAPDLRGYGDTD 66 (316)
Q Consensus 4 ~~~~~~~~~g~~l~~~~~g~-------~-p~il~~HG~~~~~~~~~~~~~~l~~~---g------~~v~~~D~~G~G~s~ 66 (316)
..+...++.|.+||+..... . .|++++||++++-..|..+++.|.+. | |.|+++.+||+|.|+
T Consensus 124 f~qykTeIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd 203 (469)
T KOG2565|consen 124 FKQYKTEIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSD 203 (469)
T ss_pred hhhhhhhhcceeEEEEEecCCccccCCcccceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCc
Confidence 44556788999999986542 1 38999999999999999999888754 2 899999999999999
Q ss_pred CCCCCcchhHHHHHHHHHHHHHHhCCcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCCCCCCccccc-------
Q 021158 67 APPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLN------- 139 (316)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~------- 139 (316)
.+.. ..++....+.-+..++-.+|.+++.+-|..+|+.++..+|..+|++|.|+-+-.+...+.......+-
T Consensus 204 ~~sk-~GFn~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHlnm~~~~s~~s~l~~~~~a~~~~~ 282 (469)
T KOG2565|consen 204 APSK-TGFNAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHLNMCFVNSPFSTLKLLYYAGFFPG 282 (469)
T ss_pred CCcc-CCccHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhhcccccCCcHHHHHHHHHHHhccc
Confidence 8764 66788888999999999999999999999999999999999999999998765554433221110000
Q ss_pred ------h-----------hhhhhccccch-hhccCCcchHHHHh--hhchHHHHHHhhhccC-CCCCCCCCCCCCCCCCC
Q 021158 140 ------N-----------FRAVYGDDYYI-CRFQEPGEIEEEFA--QIDTARLMKKFLCLRI-PKPLCIPKDTGLSTLPD 198 (316)
Q Consensus 140 ------~-----------~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 198 (316)
. +........|. .....|....+.+. ..+....+..-+..+. ......+.
T Consensus 283 ~~l~sre~~d~~~p~~~~~~~lmeesgYfhiqaTkpdTiGaAl~dsPvGlAaYIleKfstwTn~~~r~l~d--------- 353 (469)
T KOG2565|consen 283 QFLPSREFQDFHFPVGKKFDQLMEESGYFHIQATKPDTIGAALNDSPVGLAAYILEKFSTWTNTEFRSLPD--------- 353 (469)
T ss_pred ccCcchhHHHhhchhHHHHHHHHHhcCceEEecCCcchhhhhhccCchHHHHHHHHHHhhccChhhhhCCC---------
Confidence 0 00000000000 00111111111111 0111111111111111 00000000
Q ss_pred CCCCCCCCCh-HHHHHHHHhhccCCcCcccccccccccccccccCCCCccccCcEEEEEeCCCcccCCCCcchhcccccc
Q 021158 199 PSALPSWLSE-EDVNYYASKFNQKGFTGPVNYYRCWDLNWELMAPWTGVQIKVPVKYIVGDQDLVYNNKGTKEYIHNGGF 277 (316)
Q Consensus 199 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~ 277 (316)
+.....++- +.+....--+...+.......|...-........+...++.+|+-+-.+..|..-.+. ..+
T Consensus 354 -ggL~krFt~D~lltnvmiYwlT~si~ss~r~y~e~~~~~~r~~~~~r~~v~vPtg~a~f~~el~~~~~--------~~l 424 (469)
T KOG2565|consen 354 -GGLNKRFTMDELLTNVMIYWLTNSITSSQRFYDESFNQRQRDLALDRVQVRVPTGCARFKFELWHTSD--------DVL 424 (469)
T ss_pred -CchheeecHHHHhhhhhhheecCcchhhHHHHHHHHhHHHHHHHhhccccccchhhhccccchhhCcH--------HHH
Confidence 001111111 1111111122222222333332222111111112222378899999999888876443 226
Q ss_pred cccccCcccEEEEcCCCcccchhhHHHHHHHHHHHHHh
Q 021158 278 KKYVPYLQDVVVMEGVAHFINQEKAEEVGAHIYEFIKK 315 (316)
Q Consensus 278 ~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 315 (316)
....+|..+....+++||+..+|.|..+++.+.+|++.
T Consensus 425 rdky~nL~~~s~~~~GGhFaalE~p~~La~D~~~FV~~ 462 (469)
T KOG2565|consen 425 RDKYPNLTHSSYHPKGGHFAALEDPKKLAQDFFSFVEK 462 (469)
T ss_pred hhhcccceeeEeccCCcchhhhhCcHHHHHHHHHHHHH
Confidence 67888875677778889999999999999999999864
No 82
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.75 E-value=1.2e-17 Score=125.46 Aligned_cols=179 Identities=23% Similarity=0.248 Sum_probs=105.4
Q ss_pred CCeEEEEccCCCchhhhHHhhh-hhhcCCceEEccCCCC------CCC---CC-----CCCC--CcchhHHHHHHHHHHH
Q 021158 24 GPAVLFIHGFPELWYSWRNQLL-YLSSRGYRAIAPDLRG------YGD---TD-----APPS--VTSYTALHLVGDLIGL 86 (316)
Q Consensus 24 ~p~il~~HG~~~~~~~~~~~~~-~l~~~g~~v~~~D~~G------~G~---s~-----~~~~--~~~~~~~~~~~~~~~~ 86 (316)
.|+||++||+|++...|..+.. .+......+++++-|. .|. +- .... .....+.+.++.+.++
T Consensus 14 ~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~l~~l 93 (216)
T PF02230_consen 14 KPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAERLDEL 93 (216)
T ss_dssp SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHHHHHH
T ss_pred ceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHHHHHH
Confidence 5899999999999977766655 2222346666665431 122 10 0110 0123344445555555
Q ss_pred HHHh-----CCcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCCCCCCccccchhhhhhccccchhhccCCcchH
Q 021158 87 LDKL-----GIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQEPGEIE 161 (316)
Q Consensus 87 ~~~~-----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (316)
++.. ..++++++|+|+||++|+.++.++|+.+.++|.+++.........
T Consensus 94 i~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~~-------------------------- 147 (216)
T PF02230_consen 94 IDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESELE-------------------------- 147 (216)
T ss_dssp HHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCCH--------------------------
T ss_pred HHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccccccccc--------------------------
Confidence 5543 345899999999999999999999999999999997543311100
Q ss_pred HHHhhhchHHHHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhccCCcCccccccccccccccccc
Q 021158 162 EEFAQIDTARLMKKFLCLRIPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFNQKGFTGPVNYYRCWDLNWELMA 241 (316)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (316)
.. ..
T Consensus 148 -----------------------------------------------~~----------------------------~~- 151 (216)
T PF02230_consen 148 -----------------------------------------------DR----------------------------PE- 151 (216)
T ss_dssp -----------------------------------------------CC----------------------------HC-
T ss_pred -----------------------------------------------cc----------------------------cc-
Confidence 00 00
Q ss_pred CCCCccccCcEEEEEeCCCcccCCCCcchhcccccccccccCcccEEEEcCCCcccchhhHHHHHHHHHHHHHh
Q 021158 242 PWTGVQIKVPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQEKAEEVGAHIYEFIKK 315 (316)
Q Consensus 242 ~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 315 (316)
..-++|+++++|++|.++|.+..+... +.+.+...+. ++..+++.||.+.. +..+.+.+||++
T Consensus 152 ----~~~~~pi~~~hG~~D~vvp~~~~~~~~--~~L~~~~~~v-~~~~~~g~gH~i~~----~~~~~~~~~l~~ 214 (216)
T PF02230_consen 152 ----ALAKTPILIIHGDEDPVVPFEWAEKTA--EFLKAAGANV-EFHEYPGGGHEISP----EELRDLREFLEK 214 (216)
T ss_dssp ----CCCTS-EEEEEETT-SSSTHHHHHHHH--HHHHCTT-GE-EEEEETT-SSS--H----HHHHHHHHHHHH
T ss_pred ----ccCCCcEEEEecCCCCcccHHHHHHHH--HHHHhcCCCE-EEEEcCCCCCCCCH----HHHHHHHHHHhh
Confidence 022689999999999999987766543 4455666667 99999999998764 444456666654
No 83
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.74 E-value=1.1e-17 Score=126.22 Aligned_cols=182 Identities=25% Similarity=0.327 Sum_probs=113.1
Q ss_pred CCCeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCC-CCCCCCCcc--h------hHHHHHHHHHHHHHHh---
Q 021158 23 TGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGD-TDAPPSVTS--Y------TALHLVGDLIGLLDKL--- 90 (316)
Q Consensus 23 ~~p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~-s~~~~~~~~--~------~~~~~~~~~~~~~~~~--- 90 (316)
+.|.||++|++.+-......+++.|+++||.|+++|+-+-.. ......... . ..+...+++...++.+
T Consensus 13 ~~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~ 92 (218)
T PF01738_consen 13 PRPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRAQ 92 (218)
T ss_dssp SEEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHCT
T ss_pred CCCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhc
Confidence 468999999998877777889999999999999999864433 111110000 0 1234556665556655
Q ss_pred C---CcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCCCCCCccccchhhhhhccccchhhccCCcchHHHHhhh
Q 021158 91 G---IHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQEPGEIEEEFAQI 167 (316)
Q Consensus 91 ~---~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (316)
. .+++.++|+|+||.+++.++... ..+++.|..-|.....
T Consensus 93 ~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~~~------------------------------------ 135 (218)
T PF01738_consen 93 PEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSPPP------------------------------------ 135 (218)
T ss_dssp TTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSSGG------------------------------------
T ss_pred cccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCCCC------------------------------------
Confidence 2 35899999999999999999887 4677777655410000
Q ss_pred chHHHHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhccCCcCcccccccccccccccccCCCCcc
Q 021158 168 DTARLMKKFLCLRIPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFNQKGFTGPVNYYRCWDLNWELMAPWTGVQ 247 (316)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (316)
..... ..+
T Consensus 136 -----------------------------------------~~~~~-------------------------------~~~ 143 (218)
T PF01738_consen 136 -----------------------------------------PPLED-------------------------------APK 143 (218)
T ss_dssp -----------------------------------------GHHHH-------------------------------GGG
T ss_pred -----------------------------------------cchhh-------------------------------hcc
Confidence 00000 008
Q ss_pred ccCcEEEEEeCCCcccCCCCcchhcccccccccccCcccEEEEcCCCcccchh--------hHHHHHHHHHHHHHhC
Q 021158 248 IKVPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQE--------KAEEVGAHIYEFIKKF 316 (316)
Q Consensus 248 i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~--------~~~~~~~~i~~fl~~~ 316 (316)
+++|+++++|++|+.++.+....+. +.+.+..... ++++++|++|.+... ..++..+.+.+||+++
T Consensus 144 ~~~P~l~~~g~~D~~~~~~~~~~~~--~~l~~~~~~~-~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 144 IKAPVLILFGENDPFFPPEEVEALE--EALKAAGVDV-EVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRH 217 (218)
T ss_dssp --S-EEEEEETT-TTS-HHHHHHHH--HHHHCTTTTE-EEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC-
T ss_pred cCCCEeecCccCCCCCChHHHHHHH--HHHHhcCCcE-EEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhc
Confidence 8999999999999999988654432 3344445667 999999999965432 3356778888998875
No 84
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.73 E-value=1.4e-16 Score=110.28 Aligned_cols=171 Identities=20% Similarity=0.291 Sum_probs=117.6
Q ss_pred CCeEEEEccCC-----CchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHh-CCcc-eE
Q 021158 24 GPAVLFIHGFP-----ELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKL-GIHQ-VF 96 (316)
Q Consensus 24 ~p~il~~HG~~-----~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~ 96 (316)
.|..|++|.-+ .+...-..++..|.+.||.++.+|+||.|+|....+...-..+|.... .++++.. ...+ ..
T Consensus 28 ~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~GiGE~~Da~aa-ldW~~~~hp~s~~~~ 106 (210)
T COG2945 28 APIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNGIGELEDAAAA-LDWLQARHPDSASCW 106 (210)
T ss_pred CceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccCCcchHHHHHHH-HHHHHhhCCCchhhh
Confidence 57888888643 233445678889999999999999999999998765333334433333 3333333 2223 36
Q ss_pred EEEecHHHHHHHHHHhhchhHHhhhhhccCCCCCCCCCccccchhhhhhccccchhhccCCcchHHHHhhhchHHHHHHh
Q 021158 97 LVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQEPGEIEEEFAQIDTARLMKKF 176 (316)
Q Consensus 97 l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (316)
+.|+|+|+++++.+|.+.|+ ....|.+.++......
T Consensus 107 l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~~~df------------------------------------------- 142 (210)
T COG2945 107 LAGFSFGAYIAMQLAMRRPE-ILVFISILPPINAYDF------------------------------------------- 142 (210)
T ss_pred hcccchHHHHHHHHHHhccc-ccceeeccCCCCchhh-------------------------------------------
Confidence 89999999999999999875 4444544443321000
Q ss_pred hhccCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhccCCcCcccccccccccccccccCCCCccccCcEEEEE
Q 021158 177 LCLRIPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFNQKGFTGPVNYYRCWDLNWELMAPWTGVQIKVPVKYIV 256 (316)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~ 256 (316)
. + +....+|.++|+
T Consensus 143 --------------------------------s----~------------------------------l~P~P~~~lvi~ 156 (210)
T COG2945 143 --------------------------------S----F------------------------------LAPCPSPGLVIQ 156 (210)
T ss_pred --------------------------------h----h------------------------------ccCCCCCceeEe
Confidence 0 0 005578999999
Q ss_pred eCCCcccCCCCcchhcccccccccccCcccEEEEcCCCcccchhhHHHHHHHHHHHHH
Q 021158 257 GDQDLVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQEKAEEVGAHIYEFIK 314 (316)
Q Consensus 257 G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 314 (316)
|+.|.+++.....++ ++. ... +++++++++||.+- +-+.+.+.|.+|+.
T Consensus 157 g~~Ddvv~l~~~l~~------~~~-~~~-~~i~i~~a~HFF~g-Kl~~l~~~i~~~l~ 205 (210)
T COG2945 157 GDADDVVDLVAVLKW------QES-IKI-TVITIPGADHFFHG-KLIELRDTIADFLE 205 (210)
T ss_pred cChhhhhcHHHHHHh------hcC-CCC-ceEEecCCCceecc-cHHHHHHHHHHHhh
Confidence 999999998766553 233 344 78999999999874 45678888998883
No 85
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.72 E-value=1.1e-16 Score=126.53 Aligned_cols=123 Identities=20% Similarity=0.278 Sum_probs=80.3
Q ss_pred ceeEEEeCCeeEEEE-EeC--C--CCeEEEEccCCCchhhhHH-hhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHH
Q 021158 5 EHTTVATNGINMHVA-SIG--T--GPAVLFIHGFPELWYSWRN-QLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALH 78 (316)
Q Consensus 5 ~~~~~~~~g~~l~~~-~~g--~--~p~il~~HG~~~~~~~~~~-~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~ 78 (316)
++-.+...|.+|... ... + .|+||++-|+.+-...+.. +.+.|+.+|+.++++|.||.|.|...+- ..+.+.
T Consensus 166 ~~v~iP~eg~~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l--~~D~~~ 243 (411)
T PF06500_consen 166 EEVEIPFEGKTIPGYLHLPSGEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPL--TQDSSR 243 (411)
T ss_dssp EEEEEEETTCEEEEEEEESSSSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S---S-CCH
T ss_pred EEEEEeeCCcEEEEEEEcCCCCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCC--CcCHHH
Confidence 444455567776533 222 2 3677777788777766554 4578999999999999999999865431 223344
Q ss_pred HHHHHHHHHHHh---CCcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCC
Q 021158 79 LVGDLIGLLDKL---GIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFP 129 (316)
Q Consensus 79 ~~~~~~~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 129 (316)
+...+.+.+... +.++|.++|.|+||.+|.++|..+++|++++|.++++..
T Consensus 244 l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh 297 (411)
T PF06500_consen 244 LHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVH 297 (411)
T ss_dssp HHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---S
T ss_pred HHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHh
Confidence 555555555554 445899999999999999999999889999999998754
No 86
>PRK10162 acetyl esterase; Provisional
Probab=99.72 E-value=1.7e-15 Score=120.30 Aligned_cols=104 Identities=15% Similarity=0.172 Sum_probs=73.7
Q ss_pred CCeEEEEccCC---CchhhhHHhhhhhhc-CCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCC--cceEE
Q 021158 24 GPAVLFIHGFP---ELWYSWRNQLLYLSS-RGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGI--HQVFL 97 (316)
Q Consensus 24 ~p~il~~HG~~---~~~~~~~~~~~~l~~-~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l 97 (316)
.|+||++||.+ ++...|..+++.|++ .|+.|+++|+|.......+. ...+..+.++.+.+..+.++. +++++
T Consensus 81 ~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~p~--~~~D~~~a~~~l~~~~~~~~~d~~~i~l 158 (318)
T PRK10162 81 QATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARFPQ--AIEEIVAVCCYFHQHAEDYGINMSRIGF 158 (318)
T ss_pred CCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCCCC--cHHHHHHHHHHHHHhHHHhCCChhHEEE
Confidence 58999999977 566778888888876 48999999999755432222 122333333444444445554 48999
Q ss_pred EEecHHHHHHHHHHhhc------hhHHhhhhhccCCCC
Q 021158 98 VGHDWGALIAWYFCLFR------PDRVKALVNMSVPFP 129 (316)
Q Consensus 98 ~G~S~Gg~~a~~~a~~~------p~~v~~~il~~~~~~ 129 (316)
+|+|+||.+|+.++.+. +.++.++|++.|...
T Consensus 159 ~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~ 196 (318)
T PRK10162 159 AGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYG 196 (318)
T ss_pred EEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccC
Confidence 99999999999998753 246888888877554
No 87
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.71 E-value=9.2e-17 Score=120.47 Aligned_cols=107 Identities=13% Similarity=0.067 Sum_probs=73.7
Q ss_pred CCCeEEEEccCCCchhhhH---HhhhhhhcCCceEEccCCCCCCCCCCCCC--------CcchhHHHHHHHHHHHHHHhC
Q 021158 23 TGPAVLFIHGFPELWYSWR---NQLLYLSSRGYRAIAPDLRGYGDTDAPPS--------VTSYTALHLVGDLIGLLDKLG 91 (316)
Q Consensus 23 ~~p~il~~HG~~~~~~~~~---~~~~~l~~~g~~v~~~D~~G~G~s~~~~~--------~~~~~~~~~~~~~~~~~~~~~ 91 (316)
+.|+||++||.+++...+. .+...+.+.||.|+++|.+|++.+....+ .......++.+.+..+.+..+
T Consensus 12 ~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 91 (212)
T TIGR01840 12 PRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANYS 91 (212)
T ss_pred CCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhcC
Confidence 4689999999998877665 34555566799999999999875432110 001112222222222222333
Q ss_pred --CcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCC
Q 021158 92 --IHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFP 129 (316)
Q Consensus 92 --~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 129 (316)
.++++|+|||+||.+++.++.++|+.+.+++.+++...
T Consensus 92 id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~ 131 (212)
T TIGR01840 92 IDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPY 131 (212)
T ss_pred cChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcc
Confidence 34899999999999999999999999999988886543
No 88
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.70 E-value=4.7e-16 Score=122.07 Aligned_cols=103 Identities=24% Similarity=0.233 Sum_probs=66.1
Q ss_pred CCeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCC-----------------C-CcchhHHHHHHHHHH
Q 021158 24 GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPP-----------------S-VTSYTALHLVGDLIG 85 (316)
Q Consensus 24 ~p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~-----------------~-~~~~~~~~~~~~~~~ 85 (316)
-|.||.+||.++....|.... .++..||.|+.+|.||+|...... + ...+-+..+..|...
T Consensus 83 ~Pavv~~hGyg~~~~~~~~~~-~~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~r 161 (320)
T PF05448_consen 83 LPAVVQFHGYGGRSGDPFDLL-PWAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVR 161 (320)
T ss_dssp EEEEEEE--TT--GGGHHHHH-HHHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHH
T ss_pred cCEEEEecCCCCCCCCccccc-ccccCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHH
Confidence 379999999999877776544 366789999999999999322111 0 122334445556655
Q ss_pred HHHHh------CCcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCC
Q 021158 86 LLDKL------GIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPF 128 (316)
Q Consensus 86 ~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~ 128 (316)
.++.+ +.+++.+.|.|+||.+++.+|+..| +|++++...|..
T Consensus 162 avd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l 209 (320)
T PF05448_consen 162 AVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFL 209 (320)
T ss_dssp HHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESS
T ss_pred HHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCc
Confidence 55544 3358999999999999999999887 588888777644
No 89
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.70 E-value=2.5e-16 Score=125.72 Aligned_cols=104 Identities=15% Similarity=0.175 Sum_probs=85.9
Q ss_pred CeEEEEccCCCchhhh-HHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCcceEEEEecHH
Q 021158 25 PAVLFIHGFPELWYSW-RNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWG 103 (316)
Q Consensus 25 p~il~~HG~~~~~~~~-~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~G 103 (316)
|+||++..+.++.... +.+++.|.+ |+.|+..|+..-+..+... ..++++++++-+.++++++|.+ ++++|+|+|
T Consensus 103 ~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~~--~~f~ldDYi~~l~~~i~~~G~~-v~l~GvCqg 178 (406)
T TIGR01849 103 PAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVNARMVPLSA--GKFDLEDYIDYLIEFIRFLGPD-IHVIAVCQP 178 (406)
T ss_pred CcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCchhc--CCCCHHHHHHHHHHHHHHhCCC-CcEEEEchh
Confidence 7999999988766554 668899988 9999999998777554333 5778999999999999999877 999999999
Q ss_pred HHHHHHHHhhc-----hhHHhhhhhccCCCCCCC
Q 021158 104 ALIAWYFCLFR-----PDRVKALVNMSVPFPPRN 132 (316)
Q Consensus 104 g~~a~~~a~~~-----p~~v~~~il~~~~~~~~~ 132 (316)
|.+++.+++.. |.+++++++++++.....
T Consensus 179 G~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~ 212 (406)
T TIGR01849 179 AVPVLAAVALMAENEPPAQPRSMTLMGGPIDARA 212 (406)
T ss_pred hHHHHHHHHHHHhcCCCCCcceEEEEecCccCCC
Confidence 99977766654 567999999999887543
No 90
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.68 E-value=1.7e-16 Score=128.00 Aligned_cols=105 Identities=18% Similarity=0.203 Sum_probs=81.4
Q ss_pred CCCeEEEEccCCCch--hhhHH-hhhhhh--cCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHh------C
Q 021158 23 TGPAVLFIHGFPELW--YSWRN-QLLYLS--SRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKL------G 91 (316)
Q Consensus 23 ~~p~il~~HG~~~~~--~~~~~-~~~~l~--~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~------~ 91 (316)
++|++|++||++.+. ..|.+ +++.|. +..++|+++|++|+|.+..+.. ......+++++.++++.+ +
T Consensus 40 ~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a--~~~t~~vg~~la~lI~~L~~~~gl~ 117 (442)
T TIGR03230 40 ETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTS--AAYTKLVGKDVAKFVNWMQEEFNYP 117 (442)
T ss_pred CCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccc--cccHHHHHHHHHHHHHHHHHhhCCC
Confidence 369999999998754 45765 555554 2249999999999998865542 223356666777776654 3
Q ss_pred CcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCC
Q 021158 92 IHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFP 129 (316)
Q Consensus 92 ~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 129 (316)
.++++|+||||||.+|..++.+.|++|.++++++|+..
T Consensus 118 l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP 155 (442)
T TIGR03230 118 WDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGP 155 (442)
T ss_pred CCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCC
Confidence 57999999999999999999999999999999998654
No 91
>COG0400 Predicted esterase [General function prediction only]
Probab=99.68 E-value=1.1e-15 Score=111.30 Aligned_cols=174 Identities=18% Similarity=0.138 Sum_probs=117.9
Q ss_pred CCeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCC--CCCCC--CCCCCcch-------hHHHHHHHHHHHHHHhCC
Q 021158 24 GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRG--YGDTD--APPSVTSY-------TALHLVGDLIGLLDKLGI 92 (316)
Q Consensus 24 ~p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G--~G~s~--~~~~~~~~-------~~~~~~~~~~~~~~~~~~ 92 (316)
.|+||++||.|++...+.++...+..+ +.++.+.=+- .|.-. ...+...+ ....+++.+....++.+.
T Consensus 18 ~~~iilLHG~Ggde~~~~~~~~~~~P~-~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~~gi 96 (207)
T COG0400 18 APLLILLHGLGGDELDLVPLPELILPN-ATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEEYGI 96 (207)
T ss_pred CcEEEEEecCCCChhhhhhhhhhcCCC-CeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHHhCC
Confidence 468999999999988888866666665 6666653210 01000 00011222 333444555555555566
Q ss_pred --cceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCCCCCCccccchhhhhhccccchhhccCCcchHHHHhhhchH
Q 021158 93 --HQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQEPGEIEEEFAQIDTA 170 (316)
Q Consensus 93 --~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (316)
++++++|+|.||++++.+..++|+.++++|++++........
T Consensus 97 ~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~~------------------------------------ 140 (207)
T COG0400 97 DSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPEL------------------------------------ 140 (207)
T ss_pred ChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCcc------------------------------------
Confidence 689999999999999999999999999999999866542210
Q ss_pred HHHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhccCCcCcccccccccccccccccCCCCccccC
Q 021158 171 RLMKKFLCLRIPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFNQKGFTGPVNYYRCWDLNWELMAPWTGVQIKV 250 (316)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 250 (316)
.. ..-..
T Consensus 141 -------------------------------------~~------------------------------------~~~~~ 147 (207)
T COG0400 141 -------------------------------------LP------------------------------------DLAGT 147 (207)
T ss_pred -------------------------------------cc------------------------------------ccCCC
Confidence 00 04477
Q ss_pred cEEEEEeCCCcccCCCCcchhcccccccccccCcccEEEEcCCCcccchhhHHHHHHHHHH
Q 021158 251 PVKYIVGDQDLVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQEKAEEVGAHIYE 311 (316)
Q Consensus 251 Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~ 311 (316)
|+++++|+.|++||.....+.. +.+.+...++ +..+++ .||.+..+.-+...+.+.+
T Consensus 148 pill~hG~~Dpvvp~~~~~~l~--~~l~~~g~~v-~~~~~~-~GH~i~~e~~~~~~~wl~~ 204 (207)
T COG0400 148 PILLSHGTEDPVVPLALAEALA--EYLTASGADV-EVRWHE-GGHEIPPEELEAARSWLAN 204 (207)
T ss_pred eEEEeccCcCCccCHHHHHHHH--HHHHHcCCCE-EEEEec-CCCcCCHHHHHHHHHHHHh
Confidence 9999999999999998776642 3455555666 888898 6998887666555554433
No 92
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.65 E-value=2.2e-16 Score=122.28 Aligned_cols=115 Identities=20% Similarity=0.284 Sum_probs=82.9
Q ss_pred CeeEEEEEeCC-CCeEEEEccCCCch-hhhHH-hhhhh-hcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHH
Q 021158 13 GINMHVASIGT-GPAVLFIHGFPELW-YSWRN-QLLYL-SSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLD 88 (316)
Q Consensus 13 g~~l~~~~~g~-~p~il~~HG~~~~~-~~~~~-~~~~l-~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~ 88 (316)
+..+.+....+ +|++|++||++++. ..|.. +.+.+ ...+++|+++|+++++.+.... ...+...+.+++..+++
T Consensus 24 ~~~~~~~~f~~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~--a~~~~~~v~~~la~~l~ 101 (275)
T cd00707 24 PSSLKNSNFNPSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQ--AVNNTRVVGAELAKFLD 101 (275)
T ss_pred hhhhhhcCCCCCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHH--HHHhHHHHHHHHHHHHH
Confidence 44555555544 68999999999887 56654 44444 4457999999999884332211 22344455555555555
Q ss_pred Hh------CCcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCC
Q 021158 89 KL------GIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFP 129 (316)
Q Consensus 89 ~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 129 (316)
.+ +.++++++||||||.+|..++.++|+++.++++++|+..
T Consensus 102 ~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p 148 (275)
T cd00707 102 FLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGP 148 (275)
T ss_pred HHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCcc
Confidence 54 346899999999999999999999999999999998754
No 93
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.64 E-value=1.3e-14 Score=109.40 Aligned_cols=178 Identities=24% Similarity=0.310 Sum_probs=126.8
Q ss_pred CeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCC-CCCCCCCCCc---------chhHHHHHHHHHHHHHHhC---
Q 021158 25 PAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGY-GDTDAPPSVT---------SYTALHLVGDLIGLLDKLG--- 91 (316)
Q Consensus 25 p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~-G~s~~~~~~~---------~~~~~~~~~~~~~~~~~~~--- 91 (316)
|.||++|++.+-....+.+++.|+..||.|+++|+-+. |.+....+.. ..+..+...|+.+.++.+.
T Consensus 28 P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~ 107 (236)
T COG0412 28 PGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQP 107 (236)
T ss_pred CEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCC
Confidence 89999999998888999999999999999999998763 3332221100 1223667778877777762
Q ss_pred ---CcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCCCCCCccccchhhhhhccccchhhccCCcchHHHHhhhc
Q 021158 92 ---IHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQEPGEIEEEFAQID 168 (316)
Q Consensus 92 ---~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (316)
.++|.++|+||||.+++.++.+.| .+++.+..-+.......
T Consensus 108 ~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~~~----------------------------------- 151 (236)
T COG0412 108 QVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIADDT----------------------------------- 151 (236)
T ss_pred CCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCCcc-----------------------------------
Confidence 357999999999999999999987 57777766554332110
Q ss_pred hHHHHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhccCCcCcccccccccccccccccCCCCccc
Q 021158 169 TARLMKKFLCLRIPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFNQKGFTGPVNYYRCWDLNWELMAPWTGVQI 248 (316)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 248 (316)
.. . .++
T Consensus 152 ----------------------------------------~~------------------------------~----~~~ 157 (236)
T COG0412 152 ----------------------------------------AD------------------------------A----PKI 157 (236)
T ss_pred ----------------------------------------cc------------------------------c----ccc
Confidence 00 0 088
Q ss_pred cCcEEEEEeCCCcccCCCCcchhcccccccccccCcccEEEEcCCCcccchh-----------hHHHHHHHHHHHHHh
Q 021158 249 KVPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQE-----------KAEEVGAHIYEFIKK 315 (316)
Q Consensus 249 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~-----------~~~~~~~~i~~fl~~ 315 (316)
++|+|++.|+.|..+|......+. +.+.....+. ++.+++++.|.++.+ ..++-.+.+.+|+++
T Consensus 158 ~~pvl~~~~~~D~~~p~~~~~~~~--~~~~~~~~~~-~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~ 232 (236)
T COG0412 158 KVPVLLHLAGEDPYIPAADVDALA--AALEDAGVKV-DLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKR 232 (236)
T ss_pred cCcEEEEecccCCCCChhHHHHHH--HHHHhcCCCe-eEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999988665432 2223332355 899999998966633 235567777888765
No 94
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.63 E-value=1.6e-15 Score=118.24 Aligned_cols=256 Identities=13% Similarity=0.099 Sum_probs=142.6
Q ss_pred CCeEEEEccCCCchhhh-----HHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCcceEEE
Q 021158 24 GPAVLFIHGFPELWYSW-----RNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLV 98 (316)
Q Consensus 24 ~p~il~~HG~~~~~~~~-----~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 98 (316)
+++++++|..-.....| ..++..|.++|+.|+.+++++-..+........|-.+.+.+.+..+.+..+.++|.++
T Consensus 107 ~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~~~~~edYi~e~l~~aid~v~~itg~~~Inli 186 (445)
T COG3243 107 KRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLAAKNLEDYILEGLSEAIDTVKDITGQKDINLI 186 (445)
T ss_pred CCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhhhccHHHHHHHHHHHHHHHHHHHhCcccccee
Confidence 46899999987766665 4678899999999999999987777654433344445555666666677788999999
Q ss_pred EecHHHHHHHHHHhhchhH-HhhhhhccCCCCCCCCCcccc-chh--hhhhccccchhhccCCcchHHHHhhhchHHHHH
Q 021158 99 GHDWGALIAWYFCLFRPDR-VKALVNMSVPFPPRNPAVRPL-NNF--RAVYGDDYYICRFQEPGEIEEEFAQIDTARLMK 174 (316)
Q Consensus 99 G~S~Gg~~a~~~a~~~p~~-v~~~il~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (316)
|+|.||+++..+++.++.+ |+.++++.++........... ... ..................+...|....+..++.
T Consensus 187 GyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~~i~~~g~lpg~~ma~~F~mLrpndliw 266 (445)
T COG3243 187 GYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEALDADIVQKGILPGWYMAIVFFLLRPNDLIW 266 (445)
T ss_pred eEecchHHHHHHHHhhhhcccccceeeecchhhccccccccccCHHHHHHHHhhhhhccCCChHHHHHHHHhcCccccch
Confidence 9999999999999998887 999998887766433221111 000 111111111111111112233333333333333
Q ss_pred Hhhhcc-CCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhccCC-cCcccccccccccccccccCCCCccccCcE
Q 021158 175 KFLCLR-IPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFNQKG-FTGPVNYYRCWDLNWELMAPWTGVQIKVPV 252 (316)
Q Consensus 175 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pv 252 (316)
..+-.. .......+.+. .....+. ..++......|.+.+-..+ +.. ..+.-.... ..+ .+|+||+
T Consensus 267 ~~fV~nyl~ge~pl~fdl-lyWn~ds----t~~~~~~~~~~Lrn~y~~N~l~~--g~~~v~G~~--VdL----~~It~pv 333 (445)
T COG3243 267 NYFVNNYLDGEQPLPFDL-LYWNADS----TRLPGAAHSEYLRNFYLENRLIR--GGLEVSGTM--VDL----GDITCPV 333 (445)
T ss_pred HHHHHHhcCCCCCCchhH-HHhhCCC----ccCchHHHHHHHHHHHHhChhhc--cceEECCEE--ech----hhcccce
Confidence 222111 11111111111 1111111 2233344444443322211 111 111111111 112 2999999
Q ss_pred EEEEeCCCcccCCCCcchhcccccccccccCcccEEEEcCCCcccch
Q 021158 253 KYIVGDQDLVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQ 299 (316)
Q Consensus 253 l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 299 (316)
+++.|++|.++|.+.... .++..++.++++ +-++||....
T Consensus 334 y~~a~~~DhI~P~~Sv~~------g~~l~~g~~~f~-l~~sGHIa~v 373 (445)
T COG3243 334 YNLAAEEDHIAPWSSVYL------GARLLGGEVTFV-LSRSGHIAGV 373 (445)
T ss_pred EEEeecccccCCHHHHHH------HHHhcCCceEEE-EecCceEEEE
Confidence 999999999999887654 556667742444 4466996543
No 95
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.62 E-value=2.4e-15 Score=107.16 Aligned_cols=89 Identities=24% Similarity=0.274 Sum_probs=63.3
Q ss_pred EEEEccCCCch-hhhHHh-hhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCcceEEEEecHHH
Q 021158 27 VLFIHGFPELW-YSWRNQ-LLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWGA 104 (316)
Q Consensus 27 il~~HG~~~~~-~~~~~~-~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg 104 (316)
|+++||++++. ..|.+. .+.|... ++|-..|+ + .-+.++|.+.+.+.+.... +++++||||+|+
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~------~------~P~~~~W~~~l~~~i~~~~-~~~ilVaHSLGc 66 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDW------D------NPDLDEWVQALDQAIDAID-EPTILVAHSLGC 66 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC--------T------S--HHHHHHHHHHCCHC-T-TTEEEEEETHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEecccc------C------CCCHHHHHHHHHHHHhhcC-CCeEEEEeCHHH
Confidence 68999998765 457665 4567666 77777776 1 2267888888888887764 568999999999
Q ss_pred HHHHHHH-hhchhHHhhhhhccCCCC
Q 021158 105 LIAWYFC-LFRPDRVKALVNMSVPFP 129 (316)
Q Consensus 105 ~~a~~~a-~~~p~~v~~~il~~~~~~ 129 (316)
..+++++ .....+|.|++|++|+..
T Consensus 67 ~~~l~~l~~~~~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 67 LTALRWLAEQSQKKVAGALLVAPFDP 92 (171)
T ss_dssp HHHHHHHHHTCCSSEEEEEEES--SC
T ss_pred HHHHHHHhhcccccccEEEEEcCCCc
Confidence 9999999 667778999999998653
No 96
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.62 E-value=1.5e-14 Score=110.36 Aligned_cols=101 Identities=15% Similarity=0.167 Sum_probs=83.8
Q ss_pred CeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCc-ceEEEEecHH
Q 021158 25 PAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIH-QVFLVGHDWG 103 (316)
Q Consensus 25 p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~G~S~G 103 (316)
++|+++|+.+++...|.++++.|....+.|+.++.+|.+.... ...+++++++...+.+.....+ ++.|+|||+|
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~~~~----~~~si~~la~~y~~~I~~~~~~gp~~L~G~S~G 76 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRGDDEP----PPDSIEELASRYAEAIRARQPEGPYVLAGWSFG 76 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSCTTSH----EESSHHHHHHHHHHHHHHHTSSSSEEEEEETHH
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCCCCCC----CCCCHHHHHHHHHHHhhhhCCCCCeeehccCcc
Confidence 4799999999999999999999987558999999999983222 3568999999998888877555 9999999999
Q ss_pred HHHHHHHHhhchh---HHhhhhhccCCCC
Q 021158 104 ALIAWYFCLFRPD---RVKALVNMSVPFP 129 (316)
Q Consensus 104 g~~a~~~a~~~p~---~v~~~il~~~~~~ 129 (316)
|.+|..+|.+--+ .+..+++++++..
T Consensus 77 g~lA~E~A~~Le~~G~~v~~l~liD~~~p 105 (229)
T PF00975_consen 77 GILAFEMARQLEEAGEEVSRLILIDSPPP 105 (229)
T ss_dssp HHHHHHHHHHHHHTT-SESEEEEESCSST
T ss_pred HHHHHHHHHHHHHhhhccCceEEecCCCC
Confidence 9999999986433 4788999996543
No 97
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.62 E-value=4.2e-15 Score=127.48 Aligned_cols=111 Identities=23% Similarity=0.257 Sum_probs=89.2
Q ss_pred CceeEEEeCCeeEEEEEeCCC-----------CeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCC----
Q 021158 4 IEHTTVATNGINMHVASIGTG-----------PAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAP---- 68 (316)
Q Consensus 4 ~~~~~~~~~g~~l~~~~~g~~-----------p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~---- 68 (316)
+...+...++.+++|...|.+ |+||++||++++...|..+++.|.++||+|+++|+||||.|...
T Consensus 418 vp~~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~ 497 (792)
T TIGR03502 418 VPVLLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANAS 497 (792)
T ss_pred cceEEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCccccccccc
Confidence 334556668888887765432 48999999999999999999999988999999999999999543
Q ss_pred -----C-CCc-----------chhHHHHHHHHHHHHHHhC----------------CcceEEEEecHHHHHHHHHHhhc
Q 021158 69 -----P-SVT-----------SYTALHLVGDLIGLLDKLG----------------IHQVFLVGHDWGALIAWYFCLFR 114 (316)
Q Consensus 69 -----~-~~~-----------~~~~~~~~~~~~~~~~~~~----------------~~~~~l~G~S~Gg~~a~~~a~~~ 114 (316)
. ... ..++++.+.|+..+...++ ..+++++||||||.++..++...
T Consensus 498 ~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 498 GVNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred cccccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhc
Confidence 1 101 1267899999998888876 24899999999999999999753
No 98
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.61 E-value=2.7e-15 Score=91.86 Aligned_cols=75 Identities=23% Similarity=0.348 Sum_probs=65.3
Q ss_pred CeeEEEEEeCC----CCeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHH
Q 021158 13 GINMHVASIGT----GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLD 88 (316)
Q Consensus 13 g~~l~~~~~g~----~p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~ 88 (316)
|.+|+++.+.+ +.+|+++||++.++..|..+++.|+++||.|+++|+||||.|+.... ...+++++++|+..+++
T Consensus 1 G~~L~~~~w~p~~~~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg-~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 1 GTKLFYRRWKPENPPKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRG-HIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred CcEEEEEEecCCCCCCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCccc-ccCCHHHHHHHHHHHhC
Confidence 67889888764 45899999999999999999999999999999999999999986543 45688999999998764
No 99
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.60 E-value=1.7e-14 Score=105.51 Aligned_cols=119 Identities=24% Similarity=0.338 Sum_probs=83.5
Q ss_pred EEeCCeeEEEEE------eCCCCeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCC----CCC--------
Q 021158 9 VATNGINMHVAS------IGTGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDA----PPS-------- 70 (316)
Q Consensus 9 ~~~~g~~l~~~~------~g~~p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~----~~~-------- 70 (316)
...+|.+|.-+. .+.-|.||-.||++++...|..+.. ++..||.|+.+|.||.|.|.. ++.
T Consensus 62 ~g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~~~~~l~-wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~m 140 (321)
T COG3458 62 TGYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGEWHDMLH-WAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFM 140 (321)
T ss_pred eccCCceEEEEEEeecccCCccceEEEEeeccCCCCCcccccc-ccccceeEEEEecccCCCccccCCCCCCCCcCCcee
Confidence 344677776432 1345899999999999888866554 344589999999999998833 111
Q ss_pred -------CcchhHHHHHHHHHHHHHHh------CCcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCC
Q 021158 71 -------VTSYTALHLVGDLIGLLDKL------GIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFP 129 (316)
Q Consensus 71 -------~~~~~~~~~~~~~~~~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 129 (316)
...+-+.....|+..+++.+ +.+++.+-|.|.||.+++.+++..| ++++++++-|...
T Consensus 141 trGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pfl~ 211 (321)
T COG3458 141 TRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPFLS 211 (321)
T ss_pred EeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhcccccccccc
Confidence 12233334444555444433 5568999999999999999999887 7999988776543
No 100
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.58 E-value=4.4e-14 Score=94.78 Aligned_cols=106 Identities=18% Similarity=0.207 Sum_probs=78.9
Q ss_pred eEEEEccCCCchh--hhHHhhhhhhcCCceEEccCCCCCCCCC----CCCCCcchhHHHHHHHHHHHHHHhCCcceEEEE
Q 021158 26 AVLFIHGFPELWY--SWRNQLLYLSSRGYRAIAPDLRGYGDTD----APPSVTSYTALHLVGDLIGLLDKLGIHQVFLVG 99 (316)
Q Consensus 26 ~il~~HG~~~~~~--~~~~~~~~l~~~g~~v~~~D~~G~G~s~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 99 (316)
+||+.||.|.+.+ .+...+..|+.+|+.|..++++..-... ++++....-...+...+.++.+.+...+.++-|
T Consensus 16 tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~gpLi~GG 95 (213)
T COG3571 16 TILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAEGPLIIGG 95 (213)
T ss_pred EEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccCCceeecc
Confidence 7999999987655 4778899999999999999987542221 122212333455667777777777767999999
Q ss_pred ecHHHHHHHHHHhhchhHHhhhhhccCCCCCC
Q 021158 100 HDWGALIAWYFCLFRPDRVKALVNMSVPFPPR 131 (316)
Q Consensus 100 ~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~ 131 (316)
+||||.++..++..-.-.|.++++++-+..+.
T Consensus 96 kSmGGR~aSmvade~~A~i~~L~clgYPfhpp 127 (213)
T COG3571 96 KSMGGRVASMVADELQAPIDGLVCLGYPFHPP 127 (213)
T ss_pred ccccchHHHHHHHhhcCCcceEEEecCccCCC
Confidence 99999999998876555589999988666553
No 101
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.58 E-value=1.3e-14 Score=110.18 Aligned_cols=99 Identities=19% Similarity=0.236 Sum_probs=61.9
Q ss_pred CCeEEEEccCCCch---hhhHHhhhhhhcCCceEEccCCC----CCCCCCCCCCCcchhHHHHHHHHHHHHHHh------
Q 021158 24 GPAVLFIHGFPELW---YSWRNQLLYLSSRGYRAIAPDLR----GYGDTDAPPSVTSYTALHLVGDLIGLLDKL------ 90 (316)
Q Consensus 24 ~p~il~~HG~~~~~---~~~~~~~~~l~~~g~~v~~~D~~----G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~------ 90 (316)
...||||.|++... .....++..|.+.||.++-+-++ |+|.+ +.++-++||.++++.+
T Consensus 33 ~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~---------SL~~D~~eI~~~v~ylr~~~~g 103 (303)
T PF08538_consen 33 PNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTS---------SLDRDVEEIAQLVEYLRSEKGG 103 (303)
T ss_dssp SSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S-----------HHHHHHHHHHHHHHHHHHS--
T ss_pred CcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcc---------hhhhHHHHHHHHHHHHHHhhcc
Confidence 34899999998644 34567888898889999998875 45533 4555555555555543
Q ss_pred --CCcceEEEEecHHHHHHHHHHhhch-----hHHhhhhhccCCCCCC
Q 021158 91 --GIHQVFLVGHDWGALIAWYFCLFRP-----DRVKALVNMSVPFPPR 131 (316)
Q Consensus 91 --~~~~~~l~G~S~Gg~~a~~~a~~~p-----~~v~~~il~~~~~~~~ 131 (316)
+.++|+|+|||-|+.-+++++.... ..|.|+|+-+|+....
T Consensus 104 ~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDRE 151 (303)
T PF08538_consen 104 HFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDRE 151 (303)
T ss_dssp ----S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TT
T ss_pred ccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChh
Confidence 3468999999999999999998653 4699999999977654
No 102
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.56 E-value=6.9e-14 Score=100.87 Aligned_cols=117 Identities=20% Similarity=0.239 Sum_probs=73.7
Q ss_pred EEEe-CCeeEEEEEeCC-------CCeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCC-CCCCCCCCCcchhHHH
Q 021158 8 TVAT-NGINMHVASIGT-------GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGY-GDTDAPPSVTSYTALH 78 (316)
Q Consensus 8 ~~~~-~g~~l~~~~~g~-------~p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~-G~s~~~~~~~~~~~~~ 78 (316)
++.+ +|.+|+.++..+ .++||+.+|++...+.|..++.+|+.+||+|+.||.-.| |.|+..- ..++...
T Consensus 6 vi~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I--~eftms~ 83 (294)
T PF02273_consen 6 VIRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDI--NEFTMSI 83 (294)
T ss_dssp EEEETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B---------------HHH
T ss_pred eeEcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCCh--hhcchHH
Confidence 4555 789999987653 479999999999999999999999999999999999877 8888776 5777777
Q ss_pred HHHHHHHHHHHh---CCcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCC
Q 021158 79 LVGDLIGLLDKL---GIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPF 128 (316)
Q Consensus 79 ~~~~~~~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~ 128 (316)
..+++..+++.+ |..++.|+.-|+.|.+|+..|.+- .+.-+|..-+..
T Consensus 84 g~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i--~lsfLitaVGVV 134 (294)
T PF02273_consen 84 GKASLLTVIDWLATRGIRRIGLIAASLSARIAYEVAADI--NLSFLITAVGVV 134 (294)
T ss_dssp HHHHHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTTS----SEEEEES--S
T ss_pred hHHHHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhcc--CcceEEEEeeee
Confidence 777777666655 777899999999999999999954 355555554443
No 103
>PRK10115 protease 2; Provisional
Probab=99.55 E-value=1.9e-13 Score=118.80 Aligned_cols=121 Identities=17% Similarity=0.139 Sum_probs=89.8
Q ss_pred EeCCeeEEE-EEe-------CCCCeEEEEccCCCchh--hhHHhhhhhhcCCceEEccCCCCCCCCCCC------CCCcc
Q 021158 10 ATNGINMHV-ASI-------GTGPAVLFIHGFPELWY--SWRNQLLYLSSRGYRAIAPDLRGYGDTDAP------PSVTS 73 (316)
Q Consensus 10 ~~~g~~l~~-~~~-------g~~p~il~~HG~~~~~~--~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~------~~~~~ 73 (316)
+-||.+|.+ ... ++.|.||++||..+.+. .|......|.++||.|+.++.||-|.=... .....
T Consensus 423 s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~ 502 (686)
T PRK10115 423 ARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKK 502 (686)
T ss_pred CCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCC
Confidence 348999875 222 23599999999877653 466666788899999999999986543321 01123
Q ss_pred hhHHHHHHHHHHHHHHh--CCcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCC
Q 021158 74 YTALHLVGDLIGLLDKL--GIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPP 130 (316)
Q Consensus 74 ~~~~~~~~~~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~ 130 (316)
.+++|+++.+..+++.- ..+++.++|.|.||.++..++.++|++++++|...|....
T Consensus 503 ~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~ 561 (686)
T PRK10115 503 NTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDV 561 (686)
T ss_pred CcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhH
Confidence 56777777777666542 3358999999999999999999999999999988876653
No 104
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.54 E-value=1.3e-13 Score=110.05 Aligned_cols=298 Identities=20% Similarity=0.207 Sum_probs=163.4
Q ss_pred eeEEEeCCeeEEEEEe----CCCCeEEEEccCCCchhhhHH------hhhhhhcCCceEEccCCCCCCCCCCCC------
Q 021158 6 HTTVATNGINMHVASI----GTGPAVLFIHGFPELWYSWRN------QLLYLSSRGYRAIAPDLRGYGDTDAPP------ 69 (316)
Q Consensus 6 ~~~~~~~g~~l~~~~~----g~~p~il~~HG~~~~~~~~~~------~~~~l~~~g~~v~~~D~~G~G~s~~~~------ 69 (316)
+.+.+.||.-+..... +++|+|++.||+.+++..|-. ++=.|+++||.|..-+.||--.|....
T Consensus 51 h~V~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l~~~~ 130 (403)
T KOG2624|consen 51 HEVTTEDGYILTLHRIPRGKKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKLSPSS 130 (403)
T ss_pred EEEEccCCeEEEEeeecCCCCCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhcccCCcC
Confidence 3344447876554432 446999999999999999843 344688999999999999976664321
Q ss_pred --CCcchhHHH-----HHHHHHHHHHHhCCcceEEEEecHHHHHHHHHHhhchh---HHhhhhhccCCCCCCCCCccccc
Q 021158 70 --SVTSYTALH-----LVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPD---RVKALVNMSVPFPPRNPAVRPLN 139 (316)
Q Consensus 70 --~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~---~v~~~il~~~~~~~~~~~~~~~~ 139 (316)
....+++.+ +.+.|..+++..+.++++.+|||.|+.....++...|+ +|+.+++++|+........ ...
T Consensus 131 ~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~~k~~~~-~~~ 209 (403)
T KOG2624|consen 131 DKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAFPKHIKS-LLN 209 (403)
T ss_pred CcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchhhhccccc-HHH
Confidence 122345554 44555555556688899999999999999999988876 7999999999875541110 000
Q ss_pred hhhhh-------hccccchhhccCCcchHHHHhh-h-----chHHHHHHhhhccC-CCCCCCCCCCCCCCC--CCCCCCC
Q 021158 140 NFRAV-------YGDDYYICRFQEPGEIEEEFAQ-I-----DTARLMKKFLCLRI-PKPLCIPKDTGLSTL--PDPSALP 203 (316)
Q Consensus 140 ~~~~~-------~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~ 203 (316)
..... +...+....+.........+.. . ....+...++.... ..... +.... ......+
T Consensus 210 ~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~~~~-----~n~~~~~~~~~h~p 284 (403)
T KOG2624|consen 210 KFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGWNSNN-----WNTTLLPVYLAHLP 284 (403)
T ss_pred HhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcchHh-----hhhcccchhhccCC
Confidence 00000 0000000000000000000100 0 01111111111100 00000 00000 0011223
Q ss_pred CCCChHHHHHHHHhhccCCcCcccccc--cccccccccccCCCCccccCcEEEEEeCCCcccCCCCcchhcccccccccc
Q 021158 204 SWLSEEDVNYYASKFNQKGFTGPVNYY--RCWDLNWELMAPWTGVQIKVPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYV 281 (316)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~ 281 (316)
...+......+.+......++...... ............+...++++|+.+.+|++|.++.++..... ....
T Consensus 285 agtSvk~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~l~~~~DV~~~------~~~~ 358 (403)
T KOG2624|consen 285 AGTSVKNIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDWLADPEDVLIL------LLVL 358 (403)
T ss_pred CCccHHHHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCCCccccccCEEEEecCCcccCCHHHHHHH------HHhc
Confidence 344556666666655544433221111 11111222233344458999999999999999999987653 3344
Q ss_pred cCc--ccEEEEcCCCcccc---hhhHHHHHHHHHHHHHh
Q 021158 282 PYL--QDVVVMEGVAHFIN---QEKAEEVGAHIYEFIKK 315 (316)
Q Consensus 282 ~~~--~~~~~~~~~gH~~~---~~~~~~~~~~i~~fl~~ 315 (316)
+++ +..+.+++-.|+-+ .+.++++.+.|.+.+++
T Consensus 359 ~~~~~~~~~~~~~ynHlDFi~g~da~~~vy~~vi~~~~~ 397 (403)
T KOG2624|consen 359 PNSVIKYIVPIPEYNHLDFIWGLDAKEEVYDPVIERLRL 397 (403)
T ss_pred ccccccccccCCCccceeeeeccCcHHHHHHHHHHHHHh
Confidence 444 12233788888543 35789999999988874
No 105
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.54 E-value=7.7e-14 Score=104.03 Aligned_cols=105 Identities=30% Similarity=0.411 Sum_probs=75.7
Q ss_pred CCCCeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHH-h------CCcc
Q 021158 22 GTGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDK-L------GIHQ 94 (316)
Q Consensus 22 g~~p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~ 94 (316)
|.-|+|||+||+......|..+.++++++||.|+.+|+...+...... ......+.++.+.+-++. + +..+
T Consensus 15 g~yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~~~~--~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~ 92 (259)
T PF12740_consen 15 GTYPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPDDTD--EVASAAEVIDWLAKGLESKLPLGVKPDFSK 92 (259)
T ss_pred CCcCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCCCcch--hHHHHHHHHHHHHhcchhhccccccccccc
Confidence 445999999999987778999999999999999999976644322111 122222222222221111 1 4458
Q ss_pred eEEEEecHHHHHHHHHHhhc-----hhHHhhhhhccCCC
Q 021158 95 VFLVGHDWGALIAWYFCLFR-----PDRVKALVNMSVPF 128 (316)
Q Consensus 95 ~~l~G~S~Gg~~a~~~a~~~-----p~~v~~~il~~~~~ 128 (316)
+.|+|||-||-+|..++..+ +.+++++|+++|.-
T Consensus 93 l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 93 LALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred eEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 99999999999999999887 55899999999876
No 106
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.53 E-value=1.8e-14 Score=123.13 Aligned_cols=116 Identities=16% Similarity=0.246 Sum_probs=89.3
Q ss_pred eCCeeEEEEEe---C--CCCeEEEEccCCCchh---hh-HHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHH
Q 021158 11 TNGINMHVASI---G--TGPAVLFIHGFPELWY---SW-RNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVG 81 (316)
Q Consensus 11 ~~g~~l~~~~~---g--~~p~il~~HG~~~~~~---~~-~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~ 81 (316)
-||.+|++... + +.|+||++||++.+.. .+ ......|+++||.|+++|+||+|.|+.... .++ ...++
T Consensus 4 ~DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~--~~~-~~~~~ 80 (550)
T TIGR00976 4 RDGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFD--LLG-SDEAA 80 (550)
T ss_pred CCCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceE--ecC-cccch
Confidence 37888885443 2 3589999999987653 22 234567888999999999999999987542 222 45677
Q ss_pred HHHHHHHHhC-----CcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCC
Q 021158 82 DLIGLLDKLG-----IHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFP 129 (316)
Q Consensus 82 ~~~~~~~~~~-----~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 129 (316)
|+.++++.+. ..++.++|+|+||.+++.+|..+|++++++|..++...
T Consensus 81 D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d 133 (550)
T TIGR00976 81 DGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWD 133 (550)
T ss_pred HHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccc
Confidence 7777777663 24899999999999999999999999999998877654
No 107
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.53 E-value=2e-13 Score=97.30 Aligned_cols=194 Identities=20% Similarity=0.291 Sum_probs=123.5
Q ss_pred EEEeCCeeEEEEEeCCCC-eEEEEccCCCc-hhhhHHhhhhhhcCCceEEccCCC-CCCCCCCCC-C-----CcchhHHH
Q 021158 8 TVATNGINMHVASIGTGP-AVLFIHGFPEL-WYSWRNQLLYLSSRGYRAIAPDLR-GYGDTDAPP-S-----VTSYTALH 78 (316)
Q Consensus 8 ~~~~~g~~l~~~~~g~~p-~il~~HG~~~~-~~~~~~~~~~l~~~g~~v~~~D~~-G~G~s~~~~-~-----~~~~~~~~ 78 (316)
..++.|.+-++....+.+ .||++--+.+. ...-+..++.++.+||.|+.+|+- |-..|.... . ....+...
T Consensus 22 ~~~v~gldaYv~gs~~~~~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~ 101 (242)
T KOG3043|consen 22 EEEVGGLDAYVVGSTSSKKVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPK 101 (242)
T ss_pred eEeecCeeEEEecCCCCCeEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCccc
Confidence 455566666655544444 66666665444 344778899999999999999975 422221111 0 01123333
Q ss_pred HHHHHHHHHHHh---C-CcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCCCCCCccccchhhhhhccccchhhc
Q 021158 79 LVGDLIGLLDKL---G-IHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRF 154 (316)
Q Consensus 79 ~~~~~~~~~~~~---~-~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (316)
..+++..+++.+ + .++|.++|.||||.++..+....| .+.+.+..-|....
T Consensus 102 ~~~~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~~d------------------------ 156 (242)
T KOG3043|consen 102 IWKDITAVVKWLKNHGDSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSFVD------------------------ 156 (242)
T ss_pred chhHHHHHHHHHHHcCCcceeeEEEEeecceEEEEeeccch-hheeeeEecCCcCC------------------------
Confidence 334444444444 5 568999999999999999998887 56666655442211
Q ss_pred cCCcchHHHHhhhchHHHHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhccCCcCcccccccccc
Q 021158 155 QEPGEIEEEFAQIDTARLMKKFLCLRIPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFNQKGFTGPVNYYRCWD 234 (316)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (316)
.++..
T Consensus 157 -----------------------------------------------------~~D~~---------------------- 161 (242)
T KOG3043|consen 157 -----------------------------------------------------SADIA---------------------- 161 (242)
T ss_pred -----------------------------------------------------hhHHh----------------------
Confidence 01111
Q ss_pred cccccccCCCCccccCcEEEEEeCCCcccCCCCcchhcccccccccccCc-ccEEEEcCCCcccch-----hh------H
Q 021158 235 LNWELMAPWTGVQIKVPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYVPYL-QDVVVMEGVAHFINQ-----EK------A 302 (316)
Q Consensus 235 ~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~-----~~------~ 302 (316)
++++|++++.|+.|..+|++....+- + ..+..+.. .++.+++|.+|.... +. -
T Consensus 162 ------------~vk~Pilfl~ae~D~~~p~~~v~~~e--e-~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~ 226 (242)
T KOG3043|consen 162 ------------NVKAPILFLFAELDEDVPPKDVKAWE--E-KLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAA 226 (242)
T ss_pred ------------cCCCCEEEEeecccccCCHHHHHHHH--H-HHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHH
Confidence 88999999999999999998877642 1 22222221 169999999996552 22 3
Q ss_pred HHHHHHHHHHHHhC
Q 021158 303 EEVGAHIYEFIKKF 316 (316)
Q Consensus 303 ~~~~~~i~~fl~~~ 316 (316)
|+..+.+.+|++.|
T Consensus 227 eea~~~~~~Wf~~y 240 (242)
T KOG3043|consen 227 EEAYQRFISWFKHY 240 (242)
T ss_pred HHHHHHHHHHHHHh
Confidence 56777788888764
No 108
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.51 E-value=5.9e-13 Score=95.91 Aligned_cols=88 Identities=25% Similarity=0.396 Sum_probs=67.7
Q ss_pred EEEEccCCCchhhhHH--hhhhhhcCC--ceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCcceEEEEecH
Q 021158 27 VLFIHGFPELWYSWRN--QLLYLSSRG--YRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDW 102 (316)
Q Consensus 27 il~~HG~~~~~~~~~~--~~~~l~~~g--~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 102 (316)
||.+||+.++..+... +.+.+++.+ ..+.++|++ ....+..+.+.++++....+.+.|+|.||
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~-------------~~p~~a~~~l~~~i~~~~~~~~~liGSSl 68 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP-------------PFPEEAIAQLEQLIEELKPENVVLIGSSL 68 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC-------------cCHHHHHHHHHHHHHhCCCCCeEEEEECh
Confidence 7999999998877643 455666654 456666654 24566778888889888877799999999
Q ss_pred HHHHHHHHHhhchhHHhhhhhccCCCCC
Q 021158 103 GALIAWYFCLFRPDRVKALVNMSVPFPP 130 (316)
Q Consensus 103 Gg~~a~~~a~~~p~~v~~~il~~~~~~~ 130 (316)
||..|..+|.+++ +++ |+++|+..+
T Consensus 69 GG~~A~~La~~~~--~~a-vLiNPav~p 93 (187)
T PF05728_consen 69 GGFYATYLAERYG--LPA-VLINPAVRP 93 (187)
T ss_pred HHHHHHHHHHHhC--CCE-EEEcCCCCH
Confidence 9999999999886 344 889987654
No 109
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.46 E-value=6.6e-13 Score=95.05 Aligned_cols=104 Identities=17% Similarity=0.274 Sum_probs=74.5
Q ss_pred eCCeeEEEEEeCC---CC-eEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCC-CcchhHHHHHH-HHH
Q 021158 11 TNGINMHVASIGT---GP-AVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPS-VTSYTALHLVG-DLI 84 (316)
Q Consensus 11 ~~g~~l~~~~~g~---~p-~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~-~~~~~~~~~~~-~~~ 84 (316)
.||..+....+.. .+ .++.-.+.+.....|++++..++++||.|.++|+||.|.|..... ...+.+.|++. |+.
T Consensus 13 ~DG~~l~~~~~pA~~~~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~ 92 (281)
T COG4757 13 PDGYSLPGQRFPADGKASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFP 92 (281)
T ss_pred CCCccCccccccCCCCCCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhhhhcchH
Confidence 3788887666543 33 456666667777888999999999999999999999999987542 23455555553 555
Q ss_pred HHHHHh----CCcceEEEEecHHHHHHHHHHhhch
Q 021158 85 GLLDKL----GIHQVFLVGHDWGALIAWYFCLFRP 115 (316)
Q Consensus 85 ~~~~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p 115 (316)
..++.+ ...+...+|||+||.+.-.+. +++
T Consensus 93 aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~-~~~ 126 (281)
T COG4757 93 AALAALKKALPGHPLYFVGHSFGGQALGLLG-QHP 126 (281)
T ss_pred HHHHHHHhhCCCCceEEeeccccceeecccc-cCc
Confidence 555544 445899999999998665444 344
No 110
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.44 E-value=4.7e-13 Score=100.73 Aligned_cols=98 Identities=20% Similarity=0.189 Sum_probs=64.2
Q ss_pred EEEEccCCC---chhhhHHhhhhhhc-CCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHH-----hCCcceEE
Q 021158 27 VLFIHGFPE---LWYSWRNQLLYLSS-RGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDK-----LGIHQVFL 97 (316)
Q Consensus 27 il~~HG~~~---~~~~~~~~~~~l~~-~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l 97 (316)
||++||.+. +......++..+++ .|+.|+.+|+|=..... ..-.++|..+.+..+++. .+.+++++
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~~-----~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l 75 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEAP-----FPAALEDVKAAYRWLLKNADKLGIDPERIVL 75 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTSS-----TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccccccc-----ccccccccccceeeeccccccccccccceEE
Confidence 799999874 44444556666664 79999999999432221 233455555555555555 34568999
Q ss_pred EEecHHHHHHHHHHhhchh----HHhhhhhccCCCC
Q 021158 98 VGHDWGALIAWYFCLFRPD----RVKALVNMSVPFP 129 (316)
Q Consensus 98 ~G~S~Gg~~a~~~a~~~p~----~v~~~il~~~~~~ 129 (316)
+|+|.||.+++.++.+..+ .+++++++.|...
T Consensus 76 ~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d 111 (211)
T PF07859_consen 76 IGDSAGGHLALSLALRARDRGLPKPKGIILISPWTD 111 (211)
T ss_dssp EEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSS
T ss_pred eecccccchhhhhhhhhhhhcccchhhhhccccccc
Confidence 9999999999999986554 3788888888543
No 111
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=99.43 E-value=3.7e-12 Score=105.62 Aligned_cols=123 Identities=15% Similarity=0.113 Sum_probs=83.2
Q ss_pred eEEEeC----CeeEEEEEeC------CCCeEEEEccCCCchhhhHHhhh------------------hhhcCCceEEccC
Q 021158 7 TTVATN----GINMHVASIG------TGPAVLFIHGFPELWYSWRNQLL------------------YLSSRGYRAIAPD 58 (316)
Q Consensus 7 ~~~~~~----g~~l~~~~~g------~~p~il~~HG~~~~~~~~~~~~~------------------~l~~~g~~v~~~D 58 (316)
-++.++ +..++|.-.. +.|+||+++|.++++..+..+.+ .+.+. .+++.+|
T Consensus 50 Gy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~-~~~l~iD 128 (462)
T PTZ00472 50 GYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNE-AYVIYVD 128 (462)
T ss_pred EEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccc-cCeEEEe
Confidence 345553 4667776543 25899999999988766532210 12233 6899999
Q ss_pred CC-CCCCCCCCCCCcchhHHHHHHHHHHHHHHh-------CCcceEEEEecHHHHHHHHHHhhch----------hHHhh
Q 021158 59 LR-GYGDTDAPPSVTSYTALHLVGDLIGLLDKL-------GIHQVFLVGHDWGALIAWYFCLFRP----------DRVKA 120 (316)
Q Consensus 59 ~~-G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~l~G~S~Gg~~a~~~a~~~p----------~~v~~ 120 (316)
.| |+|.|.........+.++.++|+.++++.+ +..+++|+|||+||..+..+|.+.- -.++|
T Consensus 129 qP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkG 208 (462)
T PTZ00472 129 QPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAG 208 (462)
T ss_pred CCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEE
Confidence 76 899887654323445677888888888743 4578999999999999988887531 13677
Q ss_pred hhhccCCCCC
Q 021158 121 LVNMSVPFPP 130 (316)
Q Consensus 121 ~il~~~~~~~ 130 (316)
+++-++...+
T Consensus 209 i~IGNg~~dp 218 (462)
T PTZ00472 209 LAVGNGLTDP 218 (462)
T ss_pred EEEeccccCh
Confidence 7776665543
No 112
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.42 E-value=3.1e-12 Score=93.57 Aligned_cols=105 Identities=24% Similarity=0.326 Sum_probs=75.3
Q ss_pred CCCeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCC-cchhHHHHHHHHHHHHHHh-------CCcc
Q 021158 23 TGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSV-TSYTALHLVGDLIGLLDKL-------GIHQ 94 (316)
Q Consensus 23 ~~p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~-~~~~~~~~~~~~~~~~~~~-------~~~~ 94 (316)
.-|.|+|+||+......|..+..+++.+||-|+++++-..-. +... .--+....++.+..-+.++ +..+
T Consensus 45 ~yPVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~~~---p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~k 121 (307)
T PF07224_consen 45 TYPVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTLFP---PDGQDEIKSAASVINWLPEGLQHVLPENVEANLSK 121 (307)
T ss_pred CccEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhcccC---CCchHHHHHHHHHHHHHHhhhhhhCCCCcccccce
Confidence 358999999999998999999999999999999999875321 1100 1112233333333333333 4458
Q ss_pred eEEEEecHHHHHHHHHHhhchh--HHhhhhhccCCCCC
Q 021158 95 VFLVGHDWGALIAWYFCLFRPD--RVKALVNMSVPFPP 130 (316)
Q Consensus 95 ~~l~G~S~Gg~~a~~~a~~~p~--~v~~~il~~~~~~~ 130 (316)
+.++|||.||-.|..+|..+.. ++.++|.++|....
T Consensus 122 lal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~ 159 (307)
T PF07224_consen 122 LALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGT 159 (307)
T ss_pred EEEeecCCccHHHHHHHhcccccCchhheecccccCCC
Confidence 9999999999999999987632 58888988886543
No 113
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.42 E-value=9.5e-12 Score=96.21 Aligned_cols=239 Identities=15% Similarity=0.141 Sum_probs=128.7
Q ss_pred CCeEEEEccCCCchhhhH-Hh-hhhhhcCCceEEccCCCCCCCCCCCCCC--cchhHHHH----------HHHHHHHHHH
Q 021158 24 GPAVLFIHGFPELWYSWR-NQ-LLYLSSRGYRAIAPDLRGYGDTDAPPSV--TSYTALHL----------VGDLIGLLDK 89 (316)
Q Consensus 24 ~p~il~~HG~~~~~~~~~-~~-~~~l~~~g~~v~~~D~~G~G~s~~~~~~--~~~~~~~~----------~~~~~~~~~~ 89 (316)
+|.+|.++|.|.+....+ .+ +..|.+.|+..+.+..|-||...+.... .-.++.|+ +..+..+++.
T Consensus 92 rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl~~ 171 (348)
T PF09752_consen 92 RPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWLER 171 (348)
T ss_pred CceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHHHh
Confidence 688999999988654433 23 6778777999999999999976543310 01111111 2233444555
Q ss_pred hCCcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCCCCCCccccchhhhhhccccchhhccCCcchHHHHhhhch
Q 021158 90 LGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQEPGEIEEEFAQIDT 169 (316)
Q Consensus 90 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (316)
.|..++.+.|.||||.+|...|...|..+..+-.+++......- .-..+... ...
T Consensus 172 ~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vF---t~Gvls~~----------------------i~W 226 (348)
T PF09752_consen 172 EGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVF---TEGVLSNS----------------------INW 226 (348)
T ss_pred cCCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcch---hhhhhhcC----------------------CCH
Confidence 58889999999999999999999999766554444432221100 00000000 001
Q ss_pred HHHHHHhhhccCCCC--CCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhccCCcCcccccccccccccccccCCCCcc
Q 021158 170 ARLMKKFLCLRIPKP--LCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFNQKGFTGPVNYYRCWDLNWELMAPWTGVQ 247 (316)
Q Consensus 170 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (316)
..+.+. +....... ............ ..........+.+......+.. +.. ......+ .
T Consensus 227 ~~L~~q-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ea~~~m~~~md~---------~T~---l~nf~~P----~ 287 (348)
T PF09752_consen 227 DALEKQ-FEDTVYEEEISDIPAQNKSLPL--DSMEERRRDREALRFMRGVMDS---------FTH---LTNFPVP----V 287 (348)
T ss_pred HHHHHH-hcccchhhhhcccccCcccccc--hhhccccchHHHHHHHHHHHHh---------hcc---ccccCCC----C
Confidence 111111 10000000 000000000000 0000111112222222211110 000 0000000 2
Q ss_pred ccCcEEEEEeCCCcccCCCCcchhcccccccccccCcccEEEEcCCCcc-cchhhHHHHHHHHHHHHH
Q 021158 248 IKVPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHF-INQEKAEEVGAHIYEFIK 314 (316)
Q Consensus 248 i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~-~~~~~~~~~~~~i~~fl~ 314 (316)
-.-.+.++.+++|.++|...... +++..|++ ++.++++ ||. .++-+.+.|.+.|.+-++
T Consensus 288 dp~~ii~V~A~~DaYVPr~~v~~------Lq~~WPGs-EvR~l~g-GHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 288 DPSAIIFVAAKNDAYVPRHGVLS------LQEIWPGS-EVRYLPG-GHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred CCCcEEEEEecCceEechhhcch------HHHhCCCC-eEEEecC-CcEEEeeechHHHHHHHHHHhh
Confidence 23458899999999999887654 88999999 9999988 994 456677889999988765
No 114
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.41 E-value=2.1e-12 Score=113.09 Aligned_cols=84 Identities=12% Similarity=0.158 Sum_probs=63.6
Q ss_pred HhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhC--------------------CcceEEEEec
Q 021158 42 NQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLG--------------------IHQVFLVGHD 101 (316)
Q Consensus 42 ~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~l~G~S 101 (316)
.+...|.++||.|+.+|.||+|.|+.... ... .+-.+|..++++.+. ..+|.++|.|
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~--~~~-~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~S 346 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPT--TGD-YQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKS 346 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCc--cCC-HHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEc
Confidence 34578889999999999999999988652 221 223444444444442 3589999999
Q ss_pred HHHHHHHHHHhhchhHHhhhhhccCCC
Q 021158 102 WGALIAWYFCLFRPDRVKALVNMSVPF 128 (316)
Q Consensus 102 ~Gg~~a~~~a~~~p~~v~~~il~~~~~ 128 (316)
+||.+++.+|...|..++++|.+++..
T Consensus 347 Y~G~~~~~aAa~~pp~LkAIVp~a~is 373 (767)
T PRK05371 347 YLGTLPNAVATTGVEGLETIIPEAAIS 373 (767)
T ss_pred HHHHHHHHHHhhCCCcceEEEeeCCCC
Confidence 999999999999888899999877653
No 115
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=99.40 E-value=2.8e-12 Score=99.43 Aligned_cols=93 Identities=26% Similarity=0.252 Sum_probs=67.5
Q ss_pred CCeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCC--CCCCCCCCC----cchhHHHHHHHHHHHHHHh-------
Q 021158 24 GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGY--GDTDAPPSV----TSYTALHLVGDLIGLLDKL------- 90 (316)
Q Consensus 24 ~p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~--G~s~~~~~~----~~~~~~~~~~~~~~~~~~~------- 90 (316)
-|.|++-||.|++...|..+++.|++.||.|..+|+||. |........ ....+.+-..|+..+++.+
T Consensus 71 ~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~sP 150 (365)
T COG4188 71 LPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTASP 150 (365)
T ss_pred CCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhcCc
Confidence 489999999999999999999999999999999999984 333222111 1112333444444444432
Q ss_pred ------CCcceEEEEecHHHHHHHHHHhhchh
Q 021158 91 ------GIHQVFLVGHDWGALIAWYFCLFRPD 116 (316)
Q Consensus 91 ------~~~~~~l~G~S~Gg~~a~~~a~~~p~ 116 (316)
+..+|.++|||+||..++..+..+.+
T Consensus 151 ~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 151 ALAGRLDPQRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred ccccccCccceEEEecccccHHHHHhcccccc
Confidence 33479999999999999999876554
No 116
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.40 E-value=1.2e-12 Score=100.75 Aligned_cols=106 Identities=21% Similarity=0.275 Sum_probs=88.3
Q ss_pred CCeEEEEccCCCchhhhHHhhhhhhcC---CceEEccCCCCCCCCCCCC----CCcchhHHHHHHHHHHHHHHhC-----
Q 021158 24 GPAVLFIHGFPELWYSWRNQLLYLSSR---GYRAIAPDLRGYGDTDAPP----SVTSYTALHLVGDLIGLLDKLG----- 91 (316)
Q Consensus 24 ~p~il~~HG~~~~~~~~~~~~~~l~~~---g~~v~~~D~~G~G~s~~~~----~~~~~~~~~~~~~~~~~~~~~~----- 91 (316)
.+.+|+++|.+|-.+.|..+++.|.+. .+.|+++.+.||-.++... +...++.++.++--.+++++.-
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~ 81 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNK 81 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcC
Confidence 357999999999999999998877643 6999999999998777651 3467888888888777777652
Q ss_pred -CcceEEEEecHHHHHHHHHHhhch---hHHhhhhhccCCCC
Q 021158 92 -IHQVFLVGHDWGALIAWYFCLFRP---DRVKALVNMSVPFP 129 (316)
Q Consensus 92 -~~~~~l~G~S~Gg~~a~~~a~~~p---~~v~~~il~~~~~~ 129 (316)
..+++++|||.|++++++++.+.+ .+|.+++++-|...
T Consensus 82 ~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~ 123 (266)
T PF10230_consen 82 PNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIE 123 (266)
T ss_pred CCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccc
Confidence 347999999999999999999999 68899998887654
No 117
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.40 E-value=4.3e-12 Score=87.31 Aligned_cols=92 Identities=16% Similarity=0.147 Sum_probs=67.1
Q ss_pred CeEEEEccCCCch-hhhHHhhh-hhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCcceEEEEecH
Q 021158 25 PAVLFIHGFPELW-YSWRNQLL-YLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDW 102 (316)
Q Consensus 25 p~il~~HG~~~~~-~~~~~~~~-~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 102 (316)
+.+|++||+.+|. ..|+...+ .|. .+-.+++. +. ..-..++|++.+.+.+... .++++|++||+
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l~----~a~rveq~-----~w----~~P~~~dWi~~l~~~v~a~-~~~~vlVAHSL 68 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESALP----NARRVEQD-----DW----EAPVLDDWIARLEKEVNAA-EGPVVLVAHSL 68 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhCc----cchhcccC-----CC----CCCCHHHHHHHHHHHHhcc-CCCeEEEEecc
Confidence 5789999998765 45765433 222 12222222 11 2347888999998888887 36799999999
Q ss_pred HHHHHHHHHhhchhHHhhhhhccCCCCC
Q 021158 103 GALIAWYFCLFRPDRVKALVNMSVPFPP 130 (316)
Q Consensus 103 Gg~~a~~~a~~~p~~v~~~il~~~~~~~ 130 (316)
|+..+++++.+....|+|+++++|+-..
T Consensus 69 Gc~~v~h~~~~~~~~V~GalLVAppd~~ 96 (181)
T COG3545 69 GCATVAHWAEHIQRQVAGALLVAPPDVS 96 (181)
T ss_pred cHHHHHHHHHhhhhccceEEEecCCCcc
Confidence 9999999999887799999999987643
No 118
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.39 E-value=2.6e-12 Score=100.23 Aligned_cols=116 Identities=19% Similarity=0.223 Sum_probs=75.4
Q ss_pred CCeeEEEEEe-----CC--CCeEEEEccCCCch-hhhHHh---------hhhhhcCCceEEccCCCCCCCCCCCCCCcch
Q 021158 12 NGINMHVASI-----GT--GPAVLFIHGFPELW-YSWRNQ---------LLYLSSRGYRAIAPDLRGYGDTDAPPSVTSY 74 (316)
Q Consensus 12 ~g~~l~~~~~-----g~--~p~il~~HG~~~~~-~~~~~~---------~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~ 74 (316)
||.+|....+ ++ -|+||..|+++.+. ...... ...++++||.|+..|.||.|.|+......
T Consensus 1 DGv~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~-- 78 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM-- 78 (272)
T ss_dssp TS-EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT--
T ss_pred CCCEEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC--
Confidence 5677764322 22 37999999998653 111111 12388999999999999999999876422
Q ss_pred hHHHHHHHHHHHHHHh---C--CcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCC
Q 021158 75 TALHLVGDLIGLLDKL---G--IHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPP 130 (316)
Q Consensus 75 ~~~~~~~~~~~~~~~~---~--~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~ 130 (316)
...-.+|..++++.+ . ..+|.++|.|++|..++.+|...|..+++++...+....
T Consensus 79 -~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~ 138 (272)
T PF02129_consen 79 -SPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDL 138 (272)
T ss_dssp -SHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBT
T ss_pred -ChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcc
Confidence 333444555555444 2 238999999999999999999888889999988776554
No 119
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.38 E-value=4.2e-12 Score=89.50 Aligned_cols=98 Identities=19% Similarity=0.206 Sum_probs=73.9
Q ss_pred CeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHH----HhCCcceEEEEe
Q 021158 25 PAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLD----KLGIHQVFLVGH 100 (316)
Q Consensus 25 p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~G~ 100 (316)
..+||+-|=++-...=..+++.|+++|+.|+.+|-+-+-.+.+. .++.++|+.++++ ..+.++++|+|.
T Consensus 3 t~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~rt-------P~~~a~Dl~~~i~~y~~~w~~~~vvLiGY 75 (192)
T PF06057_consen 3 TLAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFWSERT-------PEQTAADLARIIRHYRARWGRKRVVLIGY 75 (192)
T ss_pred EEEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHhhhCC-------HHHHHHHHHHHHHHHHHHhCCceEEEEee
Confidence 35788888777665566788999999999999998766555443 4455555555554 557889999999
Q ss_pred cHHHHHHHHHHhhchh----HHhhhhhccCCCC
Q 021158 101 DWGALIAWYFCLFRPD----RVKALVNMSVPFP 129 (316)
Q Consensus 101 S~Gg~~a~~~a~~~p~----~v~~~il~~~~~~ 129 (316)
|+|+-+......+.|. +|..++++++...
T Consensus 76 SFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~ 108 (192)
T PF06057_consen 76 SFGADVLPFIYNRLPAALRARVAQVVLLSPSTT 108 (192)
T ss_pred cCCchhHHHHHhhCCHHHHhheeEEEEeccCCc
Confidence 9999988888887765 5788888887554
No 120
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.38 E-value=1.3e-11 Score=116.99 Aligned_cols=102 Identities=15% Similarity=0.115 Sum_probs=86.8
Q ss_pred eCCCCeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCC-cceEEEE
Q 021158 21 IGTGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGI-HQVFLVG 99 (316)
Q Consensus 21 ~g~~p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~G 99 (316)
.+++|+++++||++++...|..+++.|... ++|++++.||+|.+.. ..++++++++++.+.++.+.. .+++++|
T Consensus 1065 ~~~~~~l~~lh~~~g~~~~~~~l~~~l~~~-~~v~~~~~~g~~~~~~----~~~~l~~la~~~~~~i~~~~~~~p~~l~G 1139 (1296)
T PRK10252 1065 EGDGPTLFCFHPASGFAWQFSVLSRYLDPQ-WSIYGIQSPRPDGPMQ----TATSLDEVCEAHLATLLEQQPHGPYHLLG 1139 (1296)
T ss_pred cCCCCCeEEecCCCCchHHHHHHHHhcCCC-CcEEEEECCCCCCCCC----CCCCHHHHHHHHHHHHHhhCCCCCEEEEE
Confidence 355789999999999999999999999875 9999999999986532 357899999999999987653 4899999
Q ss_pred ecHHHHHHHHHHhh---chhHHhhhhhccCC
Q 021158 100 HDWGALIAWYFCLF---RPDRVKALVNMSVP 127 (316)
Q Consensus 100 ~S~Gg~~a~~~a~~---~p~~v~~~il~~~~ 127 (316)
||+||.+|..+|.+ .++++..++++++.
T Consensus 1140 ~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1140 YSLGGTLAQGIAARLRARGEEVAFLGLLDTW 1170 (1296)
T ss_pred echhhHHHHHHHHHHHHcCCceeEEEEecCC
Confidence 99999999999986 45678888888764
No 121
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.38 E-value=6.1e-12 Score=109.92 Aligned_cols=226 Identities=16% Similarity=0.155 Sum_probs=142.4
Q ss_pred CCceeEEEeCCeeEEEEEeCC--------CCeEEEEccCCCchhhh-----HHhhhhhhcCCceEEccCCCCCCCCCCCC
Q 021158 3 KIEHTTVATNGINMHVASIGT--------GPAVLFIHGFPELWYSW-----RNQLLYLSSRGYRAIAPDLRGYGDTDAPP 69 (316)
Q Consensus 3 ~~~~~~~~~~g~~l~~~~~g~--------~p~il~~HG~~~~~~~~-----~~~~~~l~~~g~~v~~~D~~G~G~s~~~~ 69 (316)
..+...+..+|...++...-+ -|.+|.+||.+++.... ....-.....|+.|+.+|.||.|.....-
T Consensus 497 ~~~~~~i~~~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~ 576 (755)
T KOG2100|consen 497 IVEFGKIEIDGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDF 576 (755)
T ss_pred cceeEEEEeccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhH
Confidence 445566777999998876543 37899999998733221 11122456779999999999987664431
Q ss_pred ------CCcchhHHHHHHHHHHHHHHh--CCcceEEEEecHHHHHHHHHHhhchhH-HhhhhhccCCCCCCCCCccccch
Q 021158 70 ------SVTSYTALHLVGDLIGLLDKL--GIHQVFLVGHDWGALIAWYFCLFRPDR-VKALVNMSVPFPPRNPAVRPLNN 140 (316)
Q Consensus 70 ------~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~-v~~~il~~~~~~~~~~~~~~~~~ 140 (316)
........|....+..+++.. +.+++.++|+|.||.+++.++...|+. +++.+.++|+.........
T Consensus 577 ~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~~yds~---- 652 (755)
T KOG2100|consen 577 RSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWLYYDST---- 652 (755)
T ss_pred HHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeeeeeccc----
Confidence 123346677777777776655 456899999999999999999999854 5555888887653210000
Q ss_pred hhhhhccccchhhccCCcchHHHHhhhchHHHHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhcc
Q 021158 141 FRAVYGDDYYICRFQEPGEIEEEFAQIDTARLMKKFLCLRIPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFNQ 220 (316)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (316)
+ ..+.+.. ..+....|......
T Consensus 653 ---------~----------------------terymg~---------------------------p~~~~~~y~e~~~~ 674 (755)
T KOG2100|consen 653 ---------Y----------------------TERYMGL---------------------------PSENDKGYEESSVS 674 (755)
T ss_pred ---------c----------------------cHhhcCC---------------------------Cccccchhhhcccc
Confidence 0 0000000 00001111111100
Q ss_pred CCcCcccccccccccccccccCCCCccccCcE-EEEEeCCCcccCCCCcchhcccccccccccCcccEEEEcCCCcccch
Q 021158 221 KGFTGPVNYYRCWDLNWELMAPWTGVQIKVPV-KYIVGDQDLVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQ 299 (316)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pv-l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 299 (316)
... ..++.|. |++||+.|..++.+.+..++ +++....-.. ++.++|+.+|.+..
T Consensus 675 ~~~----------------------~~~~~~~~LliHGt~DdnVh~q~s~~~~--~aL~~~gv~~-~~~vypde~H~is~ 729 (755)
T KOG2100|consen 675 SPA----------------------NNIKTPKLLLIHGTEDDNVHFQQSAILI--KALQNAGVPF-RLLVYPDENHGISY 729 (755)
T ss_pred chh----------------------hhhccCCEEEEEcCCcCCcCHHHHHHHH--HHHHHCCCce-EEEEeCCCCccccc
Confidence 000 0555565 99999999999988776654 3455544446 99999999998766
Q ss_pred hh-HHHHHHHHHHHHHh
Q 021158 300 EK-AEEVGAHIYEFIKK 315 (316)
Q Consensus 300 ~~-~~~~~~~i~~fl~~ 315 (316)
-. -..+...+..|+..
T Consensus 730 ~~~~~~~~~~~~~~~~~ 746 (755)
T KOG2100|consen 730 VEVISHLYEKLDRFLRD 746 (755)
T ss_pred ccchHHHHHHHHHHHHH
Confidence 43 35677788888764
No 122
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=99.35 E-value=1.3e-11 Score=88.23 Aligned_cols=58 Identities=17% Similarity=0.350 Sum_probs=46.1
Q ss_pred cccCcEEEEEeCCCcccCCCCcchhcccccccccccCcccEEEEcCCCcccchhhHHHHHHHHHHHHH
Q 021158 247 QIKVPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQEKAEEVGAHIYEFIK 314 (316)
Q Consensus 247 ~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 314 (316)
.+++|.|-|.|+.|.++|.+.+.. +++..++. .+..-+| ||++...+ ...+.|.+||+
T Consensus 161 ~i~~PSLHi~G~~D~iv~~~~s~~------L~~~~~~a-~vl~Hpg-gH~VP~~~--~~~~~i~~fi~ 218 (230)
T KOG2551|consen 161 PLSTPSLHIFGETDTIVPSERSEQ------LAESFKDA-TVLEHPG-GHIVPNKA--KYKEKIADFIQ 218 (230)
T ss_pred CCCCCeeEEecccceeecchHHHH------HHHhcCCC-eEEecCC-CccCCCch--HHHHHHHHHHH
Confidence 889999999999999999987765 77888898 7776776 99987665 45555555554
No 123
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.35 E-value=1.1e-12 Score=105.66 Aligned_cols=105 Identities=23% Similarity=0.223 Sum_probs=60.2
Q ss_pred CCeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCC-C-C--CC-------------C--------C---cch-
Q 021158 24 GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDT-D-A--PP-------------S--------V---TSY- 74 (316)
Q Consensus 24 ~p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s-~-~--~~-------------~--------~---~~~- 74 (316)
-|+|||-||++++...|..++..|+.+||-|+++|+|..-.+ . . .. + . ..+
T Consensus 100 ~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (379)
T PF03403_consen 100 FPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEEFE 179 (379)
T ss_dssp EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGHHH
T ss_pred CCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhHHH
Confidence 489999999999999999999999999999999999943111 0 0 00 0 0 000
Q ss_pred ----hHHHHHHHHHHHHHHh--------------------------CCcceEEEEecHHHHHHHHHHhhchhHHhhhhhc
Q 021158 75 ----TALHLVGDLIGLLDKL--------------------------GIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNM 124 (316)
Q Consensus 75 ----~~~~~~~~~~~~~~~~--------------------------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~ 124 (316)
..+.-++++..+++.+ +.+++.++|||+||..++..+.+. .++++.|++
T Consensus 180 ~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~I~L 258 (379)
T PF03403_consen 180 LRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAGILL 258 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceEEEe
Confidence 0111223333333222 234799999999999999888776 579999999
Q ss_pred cCCCC
Q 021158 125 SVPFP 129 (316)
Q Consensus 125 ~~~~~ 129 (316)
++...
T Consensus 259 D~W~~ 263 (379)
T PF03403_consen 259 DPWMF 263 (379)
T ss_dssp S---T
T ss_pred CCccc
Confidence 97543
No 124
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.34 E-value=4.5e-12 Score=95.78 Aligned_cols=107 Identities=22% Similarity=0.309 Sum_probs=69.4
Q ss_pred CCeEEEEccCCCchhhhHHhhhhhh-cCCce----EEccCCCCC----CCCC---CCC------CCcc-hhHHHHHHHHH
Q 021158 24 GPAVLFIHGFPELWYSWRNQLLYLS-SRGYR----AIAPDLRGY----GDTD---APP------SVTS-YTALHLVGDLI 84 (316)
Q Consensus 24 ~p~il~~HG~~~~~~~~~~~~~~l~-~~g~~----v~~~D~~G~----G~s~---~~~------~~~~-~~~~~~~~~~~ 84 (316)
..|.||+||++++...+..++..+. +.|.. ++.++--|. |.=. ..+ .... .+....++.+.
T Consensus 11 ~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl~ 90 (255)
T PF06028_consen 11 TTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWLK 90 (255)
T ss_dssp -EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHHH
T ss_pred CCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHHH
Confidence 4589999999999999999999997 65432 233333232 2111 111 1112 35677777777
Q ss_pred HHHHHh----CCcceEEEEecHHHHHHHHHHhhchh-----HHhhhhhccCCCCC
Q 021158 85 GLLDKL----GIHQVFLVGHDWGALIAWYFCLFRPD-----RVKALVNMSVPFPP 130 (316)
Q Consensus 85 ~~~~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~-----~v~~~il~~~~~~~ 130 (316)
.++..+ +.+++.+|||||||..++.++..+.. ++..+|.+++++..
T Consensus 91 ~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng 145 (255)
T PF06028_consen 91 KVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNG 145 (255)
T ss_dssp HHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTT
T ss_pred HHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCc
Confidence 777766 67799999999999999999887532 58999999988764
No 125
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.33 E-value=8.9e-13 Score=98.20 Aligned_cols=51 Identities=20% Similarity=0.216 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHh---CCcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCC
Q 021158 79 LVGDLIGLLDKL---GIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPP 130 (316)
Q Consensus 79 ~~~~~~~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~ 130 (316)
+.+...+++... +.++|.|+|.|.||-+|+.+|..+| .|+++|.++|+...
T Consensus 5 yfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~ 58 (213)
T PF08840_consen 5 YFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVV 58 (213)
T ss_dssp HHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB-
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeE
Confidence 444555555554 2358999999999999999999999 79999999987654
No 126
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.32 E-value=3.8e-11 Score=94.15 Aligned_cols=104 Identities=16% Similarity=0.093 Sum_probs=75.9
Q ss_pred CCeEEEEccCCC-----chhhhHHhhhhhh-cCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHH------hC
Q 021158 24 GPAVLFIHGFPE-----LWYSWRNQLLYLS-SRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDK------LG 91 (316)
Q Consensus 24 ~p~il~~HG~~~-----~~~~~~~~~~~l~-~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~------~~ 91 (316)
.|.||++||.|. +...+..+...++ +.+..|+++|+|=-.+.. ....++|-.+.+..+.++ .+
T Consensus 90 ~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~-----~Pa~y~D~~~Al~w~~~~~~~~~~~D 164 (336)
T KOG1515|consen 90 LPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHP-----FPAAYDDGWAALKWVLKNSWLKLGAD 164 (336)
T ss_pred ceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCC-----CCccchHHHHHHHHHHHhHHHHhCCC
Confidence 489999999873 3556778887774 447899999998333322 344566666666666664 24
Q ss_pred CcceEEEEecHHHHHHHHHHhhc------hhHHhhhhhccCCCCCCC
Q 021158 92 IHQVFLVGHDWGALIAWYFCLFR------PDRVKALVNMSVPFPPRN 132 (316)
Q Consensus 92 ~~~~~l~G~S~Gg~~a~~~a~~~------p~~v~~~il~~~~~~~~~ 132 (316)
.++++|+|-|.||.+|..+|.+. +-++++.|++-|......
T Consensus 165 ~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~ 211 (336)
T KOG1515|consen 165 PSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTD 211 (336)
T ss_pred cccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCC
Confidence 56899999999999999888753 247899999998776544
No 127
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.31 E-value=3.3e-12 Score=95.42 Aligned_cols=105 Identities=18% Similarity=0.099 Sum_probs=52.9
Q ss_pred CCCeEEEEccCCCchhhhHHhhh----hhhcCCceEEccCCCCC-----CCCCC-----------CC-------C---Cc
Q 021158 23 TGPAVLFIHGFPELWYSWRNQLL----YLSSRGYRAIAPDLRGY-----GDTDA-----------PP-------S---VT 72 (316)
Q Consensus 23 ~~p~il~~HG~~~~~~~~~~~~~----~l~~~g~~v~~~D~~G~-----G~s~~-----------~~-------~---~~ 72 (316)
.++.||++||++.|...++.... .|.+.++..+.+|-|-- |-... .+ . ..
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 82 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHE 82 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGG
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCccc
Confidence 35789999999999999876544 45442588888875421 11110 00 0 01
Q ss_pred chhHHHHHHHHHHHHHHhCCcceEEEEecHHHHHHHHHHhhchh--------HHhhhhhccCCC
Q 021158 73 SYTALHLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPD--------RVKALVNMSVPF 128 (316)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~--------~v~~~il~~~~~ 128 (316)
...+++..+.+.+.++..| .=..|+|+|.||.+|..++..... .++-+|++++..
T Consensus 83 ~~~~~~sl~~l~~~i~~~G-PfdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~ 145 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEENG-PFDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFP 145 (212)
T ss_dssp G---HHHHHHHHHHHHHH----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES---
T ss_pred ccCHHHHHHHHHHHHHhcC-CeEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccC
Confidence 2335556666666666655 135699999999999988865321 245566666543
No 128
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.31 E-value=1.2e-11 Score=92.73 Aligned_cols=107 Identities=24% Similarity=0.274 Sum_probs=72.5
Q ss_pred CCCeEEEEccCCCchhhhHHhhhhhh--------cCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHh----
Q 021158 23 TGPAVLFIHGFPELWYSWRNQLLYLS--------SRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKL---- 90 (316)
Q Consensus 23 ~~p~il~~HG~~~~~~~~~~~~~~l~--------~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~---- 90 (316)
++.+|||+||.+++...++.+...+. ...+.++++|+......-.... -....+...+.+..+++..
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~-l~~q~~~~~~~i~~i~~~~~~~~ 81 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRT-LQRQAEFLAEAIKYILELYKSNR 81 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCcccccccccc-HHHHHHHHHHHHHHHHHhhhhcc
Confidence 46899999999999998888876552 1247899999876432221110 0112223333444444444
Q ss_pred -CCcceEEEEecHHHHHHHHHHhhch---hHHhhhhhccCCCCC
Q 021158 91 -GIHQVFLVGHDWGALIAWYFCLFRP---DRVKALVNMSVPFPP 130 (316)
Q Consensus 91 -~~~~~~l~G~S~Gg~~a~~~a~~~p---~~v~~~il~~~~~~~ 130 (316)
+.++++++||||||.+|..++...+ +.|+.+|.+++|...
T Consensus 82 ~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g 125 (225)
T PF07819_consen 82 PPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRG 125 (225)
T ss_pred CCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCC
Confidence 4568999999999999988886543 469999999987754
No 129
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.30 E-value=3.8e-11 Score=84.50 Aligned_cols=111 Identities=19% Similarity=0.124 Sum_probs=71.4
Q ss_pred eEEEEEeCC---CCeEEEEccCCC---chhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHH
Q 021158 15 NMHVASIGT---GPAVLFIHGFPE---LWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLD 88 (316)
Q Consensus 15 ~l~~~~~g~---~p~il~~HG~~~---~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~ 88 (316)
+-.+-.+|+ .|..||+||.-. +...--..+..+.++||+|.+++ ++.+..... -..+..+...-+.-+++
T Consensus 55 ~q~VDIwg~~~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvg---Y~l~~q~ht-L~qt~~~~~~gv~filk 130 (270)
T KOG4627|consen 55 RQLVDIWGSTNQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVG---YNLCPQVHT-LEQTMTQFTHGVNFILK 130 (270)
T ss_pred ceEEEEecCCCCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEec---cCcCccccc-HHHHHHHHHHHHHHHHH
Confidence 344455664 589999999632 22222344556667799999886 444433211 12345555555555666
Q ss_pred HhCC-cceEEEEecHHHHHHHHHHhh-chhHHhhhhhccCCCC
Q 021158 89 KLGI-HQVFLVGHDWGALIAWYFCLF-RPDRVKALVNMSVPFP 129 (316)
Q Consensus 89 ~~~~-~~~~l~G~S~Gg~~a~~~a~~-~p~~v~~~il~~~~~~ 129 (316)
.... +.+.+-|||.|+.+|..+..+ +..+|.|++++++.+.
T Consensus 131 ~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~ 173 (270)
T KOG4627|consen 131 YTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYD 173 (270)
T ss_pred hcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhh
Confidence 6544 456667999999999988765 4448999999997664
No 130
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=99.29 E-value=2.4e-11 Score=99.27 Aligned_cols=124 Identities=19% Similarity=0.240 Sum_probs=85.0
Q ss_pred eeEEEe-CCeeEEEEEe--CCCCeEEEEccC---CCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHH
Q 021158 6 HTTVAT-NGINMHVASI--GTGPAVLFIHGF---PELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHL 79 (316)
Q Consensus 6 ~~~~~~-~g~~l~~~~~--g~~p~il~~HG~---~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~ 79 (316)
.+..+. +|.++.+-.. |....-.+-+.. ......|..+++.|.+.||.+ ..|++|+|.+.+.........+++
T Consensus 70 ~~~~~~~~gv~i~vp~~~~g~~~i~~ldp~~~~~~~~~~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~~~~~~~~~L 148 (440)
T PLN02733 70 GKTVSLDPKTEIVVPDDRYGLYAIDILDPDVIIRLDEVYYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQSNRLPETMDGL 148 (440)
T ss_pred CceecCCCCceEEcCCCCCCceeeEEecCccccCcchHHHHHHHHHHHHHcCCcc-CCCcccCCCCccccccHHHHHHHH
Confidence 344555 4777776542 321111112221 345678999999999999755 899999999877542122334555
Q ss_pred HHHHHHHHHHhCCcceEEEEecHHHHHHHHHHhhchhH----HhhhhhccCCCCC
Q 021158 80 VGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDR----VKALVNMSVPFPP 130 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~----v~~~il~~~~~~~ 130 (316)
.+.+.++.+..+.++++|+||||||.+++.++..+|+. |+++|.++++...
T Consensus 149 k~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p~~~~k~I~~~I~la~P~~G 203 (440)
T PLN02733 149 KKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLHSDVFEKYVNSWIAIAAPFQG 203 (440)
T ss_pred HHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCCHhHHhHhccEEEECCCCCC
Confidence 55555666666778999999999999999999988874 6777788876553
No 131
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.25 E-value=3.2e-10 Score=85.51 Aligned_cols=100 Identities=13% Similarity=0.154 Sum_probs=84.9
Q ss_pred CeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHh-CCcceEEEEecHH
Q 021158 25 PAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKL-GIHQVFLVGHDWG 103 (316)
Q Consensus 25 p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~G~S~G 103 (316)
|++.++|+.+++...|.++...|... ..|+..+.||.+.-.. ...+++++++...+.|... ...+++|+|||+|
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~-~~v~~l~a~g~~~~~~----~~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~G 75 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPL-LPVYGLQAPGYGAGEQ----PFASLDDMAAAYVAAIRRVQPEGPYVLLGWSLG 75 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccC-ceeeccccCccccccc----ccCCHHHHHHHHHHHHHHhCCCCCEEEEeeccc
Confidence 68999999999999999999999998 9999999999986333 3458889998888877776 4459999999999
Q ss_pred HHHHHHHHhhc---hhHHhhhhhccCCCC
Q 021158 104 ALIAWYFCLFR---PDRVKALVNMSVPFP 129 (316)
Q Consensus 104 g~~a~~~a~~~---p~~v~~~il~~~~~~ 129 (316)
|.+|..+|.+- .+.|..+++++++..
T Consensus 76 G~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 76 GAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred cHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 99999999863 346888999998776
No 132
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.24 E-value=6.2e-10 Score=88.93 Aligned_cols=102 Identities=19% Similarity=0.116 Sum_probs=68.6
Q ss_pred CCeEEEEccCCC---chhhh-HHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHH---hC--Ccc
Q 021158 24 GPAVLFIHGFPE---LWYSW-RNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDK---LG--IHQ 94 (316)
Q Consensus 24 ~p~il~~HG~~~---~~~~~-~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~ 94 (316)
.|+||++||.+. +.... ..+...+...|+.|+++|+|=...-.. ...+++..+.+..+.++ ++ .++
T Consensus 79 ~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~~-----p~~~~d~~~a~~~l~~~~~~~g~dp~~ 153 (312)
T COG0657 79 APVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHPF-----PAALEDAYAAYRWLRANAAELGIDPSR 153 (312)
T ss_pred CcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCCC-----CchHHHHHHHHHHHHhhhHhhCCCccc
Confidence 689999999863 44444 444456667799999999995443322 22444444444444433 33 457
Q ss_pred eEEEEecHHHHHHHHHHhhchh----HHhhhhhccCCCCC
Q 021158 95 VFLVGHDWGALIAWYFCLFRPD----RVKALVNMSVPFPP 130 (316)
Q Consensus 95 ~~l~G~S~Gg~~a~~~a~~~p~----~v~~~il~~~~~~~ 130 (316)
|+++|+|.||.+++.++..-.+ ...+.+++.|....
T Consensus 154 i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~ 193 (312)
T COG0657 154 IAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDL 193 (312)
T ss_pred eEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCC
Confidence 9999999999999999887554 35677777776554
No 133
>PRK04940 hypothetical protein; Provisional
Probab=99.22 E-value=3.4e-10 Score=79.87 Aligned_cols=86 Identities=16% Similarity=0.224 Sum_probs=53.3
Q ss_pred EEEEccCCCchhh--hHHhh-hhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHh---C-CcceEEEE
Q 021158 27 VLFIHGFPELWYS--WRNQL-LYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKL---G-IHQVFLVG 99 (316)
Q Consensus 27 il~~HG~~~~~~~--~~~~~-~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~l~G 99 (316)
||++||+.+|+.+ ..... ..+ .-..+++ +++ .....+.++.+.+.+..+ + .+++.|+|
T Consensus 2 IlYlHGF~SS~~S~~~Ka~~l~~~-~p~~~~~--~l~------------~~~P~~a~~~l~~~i~~~~~~~~~~~~~liG 66 (180)
T PRK04940 2 IIYLHGFDSTSPGNHEKVLQLQFI-DPDVRLI--SYS------------TLHPKHDMQHLLKEVDKMLQLSDDERPLICG 66 (180)
T ss_pred EEEeCCCCCCCCccHHHHHhheee-CCCCeEE--ECC------------CCCHHHHHHHHHHHHHHhhhccCCCCcEEEE
Confidence 7999999998877 42211 122 1112322 211 123333344455555431 1 25799999
Q ss_pred ecHHHHHHHHHHhhchhHHhhhhhccCCCCC
Q 021158 100 HDWGALIAWYFCLFRPDRVKALVNMSVPFPP 130 (316)
Q Consensus 100 ~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~ 130 (316)
.|+||+.|..++.++. -..|+++|...+
T Consensus 67 SSLGGyyA~~La~~~g---~~aVLiNPAv~P 94 (180)
T PRK04940 67 VGLGGYWAERIGFLCG---IRQVIFNPNLFP 94 (180)
T ss_pred eChHHHHHHHHHHHHC---CCEEEECCCCCh
Confidence 9999999999999986 366789987765
No 134
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=99.15 E-value=2.1e-09 Score=80.91 Aligned_cols=95 Identities=21% Similarity=0.111 Sum_probs=69.0
Q ss_pred EEccCC--CchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHH-HhCCcceEEEEecHHHH
Q 021158 29 FIHGFP--ELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLD-KLGIHQVFLVGHDWGAL 105 (316)
Q Consensus 29 ~~HG~~--~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~G~S~Gg~ 105 (316)
++|..+ ++...|..+...|... +.|+++|.+|++.+.... .+.+.+++.+...+. ..+..+++++|||+||.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~~-~~v~~~~~~g~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~ 76 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALRGR-RDVSALPLPGFGPGEPLP----ASADALVEAQAEAVLRAAGGRPFVLVGHSSGGL 76 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcCCC-ccEEEecCCCCCCCCCCC----CCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHH
Confidence 445544 6777899999999875 999999999998765443 245666665554443 34456899999999999
Q ss_pred HHHHHHhhc---hhHHhhhhhccCCC
Q 021158 106 IAWYFCLFR---PDRVKALVNMSVPF 128 (316)
Q Consensus 106 ~a~~~a~~~---p~~v~~~il~~~~~ 128 (316)
++...+.+. ++.+.+++++++..
T Consensus 77 ~a~~~a~~l~~~~~~~~~l~~~~~~~ 102 (212)
T smart00824 77 LAHAVAARLEARGIPPAAVVLLDTYP 102 (212)
T ss_pred HHHHHHHHHHhCCCCCcEEEEEccCC
Confidence 999888864 34577787776533
No 135
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.15 E-value=8.6e-10 Score=78.55 Aligned_cols=102 Identities=19% Similarity=0.246 Sum_probs=70.1
Q ss_pred CeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCC--------CCC--------CCcchhHHHHHHHHHHHHH
Q 021158 25 PAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTD--------APP--------SVTSYTALHLVGDLIGLLD 88 (316)
Q Consensus 25 p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~--------~~~--------~~~~~~~~~~~~~~~~~~~ 88 (316)
.+||++||.+.+...|..+++.|.-....-+++.-|-.-.+. ..+ ....-.....++.+..+++
T Consensus 4 atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~Li~ 83 (206)
T KOG2112|consen 4 ATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANLID 83 (206)
T ss_pred EEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHHHH
Confidence 479999999999999988888777665666776544221110 000 0123345556666666666
Q ss_pred Hh---C--CcceEEEEecHHHHHHHHHHhhchhHHhhhhhccC
Q 021158 89 KL---G--IHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSV 126 (316)
Q Consensus 89 ~~---~--~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~ 126 (316)
.. | ..++.+-|.|+||.+++..+..+|..+.+++...+
T Consensus 84 ~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~ 126 (206)
T KOG2112|consen 84 NEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSG 126 (206)
T ss_pred HHHHcCCCccceeEcccCchHHHHHHHHhccccccceeecccc
Confidence 54 3 34789999999999999999999877777765554
No 136
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.14 E-value=1.4e-09 Score=80.41 Aligned_cols=106 Identities=15% Similarity=0.153 Sum_probs=68.8
Q ss_pred CCeEEEEccCCCchhhhHHh--hhhhh-cCCceEEccCCCCCCCCC--C----CCC-CcchhHHHHHHHHHHHHHHhCC-
Q 021158 24 GPAVLFIHGFPELWYSWRNQ--LLYLS-SRGYRAIAPDLRGYGDTD--A----PPS-VTSYTALHLVGDLIGLLDKLGI- 92 (316)
Q Consensus 24 ~p~il~~HG~~~~~~~~~~~--~~~l~-~~g~~v~~~D~~G~G~s~--~----~~~-~~~~~~~~~~~~~~~~~~~~~~- 92 (316)
.|.||++||.+.+...+... ...|+ ++||.|+.++........ . ... ...-+...+++.+.++....++
T Consensus 16 ~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~iD 95 (220)
T PF10503_consen 16 VPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYNID 95 (220)
T ss_pred CCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhcccC
Confidence 48999999999998876542 22344 458999999864211110 0 000 0111222233334444444444
Q ss_pred -cceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCC
Q 021158 93 -HQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFP 129 (316)
Q Consensus 93 -~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 129 (316)
++|++.|+|.||+++..++..+|+.+.++..+++...
T Consensus 96 ~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~ 133 (220)
T PF10503_consen 96 PSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPY 133 (220)
T ss_pred CCceeeEEECHHHHHHHHHHHhCCccceEEEeeccccc
Confidence 4899999999999999999999999999887776543
No 137
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.12 E-value=9e-10 Score=90.63 Aligned_cols=105 Identities=19% Similarity=0.199 Sum_probs=78.9
Q ss_pred CCeEEEEccCCCchh---hhH--Hh--hhhhhcCCceEEccCCCCCCCCCCCC------CCcchhHHHHHHHHHHHHHHh
Q 021158 24 GPAVLFIHGFPELWY---SWR--NQ--LLYLSSRGYRAIAPDLRGYGDTDAPP------SVTSYTALHLVGDLIGLLDKL 90 (316)
Q Consensus 24 ~p~il~~HG~~~~~~---~~~--~~--~~~l~~~g~~v~~~D~~G~G~s~~~~------~~~~~~~~~~~~~~~~~~~~~ 90 (316)
-|+++++-|.++-.. .|. .. ...|+..||.|+.+|-||.-...... ......++|.++-+.-+.++.
T Consensus 642 Yptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~ 721 (867)
T KOG2281|consen 642 YPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQT 721 (867)
T ss_pred CceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhc
Confidence 389999999986322 222 22 24688899999999999975543321 224557888898888888877
Q ss_pred ---CCcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCC
Q 021158 91 ---GIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPF 128 (316)
Q Consensus 91 ---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~ 128 (316)
+.++|.+-|||+||.+++....++|+-++..|.-+|..
T Consensus 722 gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT 762 (867)
T KOG2281|consen 722 GFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVT 762 (867)
T ss_pred CcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcce
Confidence 45789999999999999999999999777777555443
No 138
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.11 E-value=8.1e-10 Score=80.34 Aligned_cols=124 Identities=13% Similarity=0.169 Sum_probs=86.7
Q ss_pred ceeEEEeCCeeEEEEEeC--------CCCeEEEEccCCCchhhhHHhhhhhhcC---CceEEccCCCCCCCCCC---CC-
Q 021158 5 EHTTVATNGINMHVASIG--------TGPAVLFIHGFPELWYSWRNQLLYLSSR---GYRAIAPDLRGYGDTDA---PP- 69 (316)
Q Consensus 5 ~~~~~~~~g~~l~~~~~g--------~~p~il~~HG~~~~~~~~~~~~~~l~~~---g~~v~~~D~~G~G~s~~---~~- 69 (316)
.+++++.+|..+.....+ +.+.+++++|.++....|..++++|-.. .+.++.+-..||-.-+. ..
T Consensus 2 ~e~~~~~~gl~~si~~~~~~v~~~~~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~ 81 (301)
T KOG3975|consen 2 TEKEYTKSGLPTSILTLKPWVTKSGEDKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDH 81 (301)
T ss_pred cceeeeecCCcccceeeeeeeccCCCCceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCccccccc
Confidence 456677777776655443 2578999999999999998888776533 15688888877754431 11
Q ss_pred ---CCcchhHHHHHHHHHHHHHHh--CCcceEEEEecHHHHHHHHHHhhchh--HHhhhhhccCCC
Q 021158 70 ---SVTSYTALHLVGDLIGLLDKL--GIHQVFLVGHDWGALIAWYFCLFRPD--RVKALVNMSVPF 128 (316)
Q Consensus 70 ---~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~--~v~~~il~~~~~ 128 (316)
...-++.++.++-=.++++.. ...+++++|||.|+++.+.+...... .|.+++++-|..
T Consensus 82 s~~~~eifsL~~QV~HKlaFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTI 147 (301)
T KOG3975|consen 82 SHTNEEIFSLQDQVDHKLAFIKEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTI 147 (301)
T ss_pred ccccccccchhhHHHHHHHHHHHhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchH
Confidence 124567788888777777765 34589999999999999998874222 466666665543
No 139
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=99.10 E-value=7.3e-11 Score=87.04 Aligned_cols=89 Identities=24% Similarity=0.344 Sum_probs=55.2
Q ss_pred CeEEEEccCCC-chhhhHHhhhhhhcCCce---EEccCCCCCCCCCCCCC--CcchhHHHHHHHHHHHHHHhCCcceEEE
Q 021158 25 PAVLFIHGFPE-LWYSWRNQLLYLSSRGYR---AIAPDLRGYGDTDAPPS--VTSYTALHLVGDLIGLLDKLGIHQVFLV 98 (316)
Q Consensus 25 p~il~~HG~~~-~~~~~~~~~~~l~~~g~~---v~~~D~~G~G~s~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 98 (316)
.||||+||.++ ....|..+.+.|.++||. ++++++-....+..... ....+..++.+-+..+++..|. +|.||
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIV 80 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDIV 80 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEEE
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEEE
Confidence 47999999998 667899999999999999 79999743332111110 0111234555566666667798 99999
Q ss_pred EecHHHHHHHHHHhhc
Q 021158 99 GHDWGALIAWYFCLFR 114 (316)
Q Consensus 99 G~S~Gg~~a~~~a~~~ 114 (316)
||||||.++..+....
T Consensus 81 gHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 81 GHSMGGTIARYYIKGG 96 (219)
T ss_dssp EETCHHHHHHHHHHHC
T ss_pred EcCCcCHHHHHHHHHc
Confidence 9999999988887543
No 140
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=99.03 E-value=6.9e-10 Score=83.45 Aligned_cols=105 Identities=16% Similarity=0.229 Sum_probs=70.7
Q ss_pred CeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCC---------CC-------------CCc-----chhHH
Q 021158 25 PAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDA---------PP-------------SVT-----SYTAL 77 (316)
Q Consensus 25 p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~---------~~-------------~~~-----~~~~~ 77 (316)
|.+||-||++++...|..++-.|+.+||-|.++.+|.+-.+-. .+ +.. .....
T Consensus 119 PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irNeqv~ 198 (399)
T KOG3847|consen 119 PVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRNEQVG 198 (399)
T ss_pred cEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeCHHHH
Confidence 8999999999999999999999999999999999986543311 00 000 00111
Q ss_pred HHHHHHHH---HHHHh------------------------CCcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCC
Q 021158 78 HLVGDLIG---LLDKL------------------------GIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPP 130 (316)
Q Consensus 78 ~~~~~~~~---~~~~~------------------------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~ 130 (316)
.-++.+.. +++.+ +-.++.++|||+||..++...+.+. ++++.|++++.+.+
T Consensus 199 ~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t-~FrcaI~lD~WM~P 277 (399)
T KOG3847|consen 199 QRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHT-DFRCAIALDAWMFP 277 (399)
T ss_pred HHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhcccc-ceeeeeeeeeeecc
Confidence 11222222 22211 1226889999999999998887765 57788877765443
No 141
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=99.02 E-value=1.2e-09 Score=85.48 Aligned_cols=87 Identities=26% Similarity=0.349 Sum_probs=53.9
Q ss_pred hhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCC---cceEEEEecHHHHHHHHHHhhch----
Q 021158 43 QLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGI---HQVFLVGHDWGALIAWYFCLFRP---- 115 (316)
Q Consensus 43 ~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~G~S~Gg~~a~~~a~~~p---- 115 (316)
++..+.++||.|+++|+.|.|..........+..-|.++...++....+. .++.++|||.||..++..+...+
T Consensus 18 ~l~~~L~~GyaVv~pDY~Glg~~y~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l~~~YAp 97 (290)
T PF03583_consen 18 FLAAWLARGYAVVAPDYEGLGTPYLNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAELAPSYAP 97 (290)
T ss_pred HHHHHHHCCCEEEecCCCCCCCcccCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHHhHHhCc
Confidence 45666688999999999999983322211223333444444443333332 47999999999999887775533
Q ss_pred h-H--HhhhhhccCCCC
Q 021158 116 D-R--VKALVNMSVPFP 129 (316)
Q Consensus 116 ~-~--v~~~il~~~~~~ 129 (316)
+ . +.+.+..+++..
T Consensus 98 eL~~~l~Gaa~gg~~~d 114 (290)
T PF03583_consen 98 ELNRDLVGAAAGGPPAD 114 (290)
T ss_pred ccccceeEEeccCCccC
Confidence 3 2 556665555443
No 142
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=99.00 E-value=8.4e-09 Score=83.42 Aligned_cols=209 Identities=13% Similarity=0.112 Sum_probs=108.3
Q ss_pred hhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHh-----CCcceEEEEecHHHHHHHHHHhhchhHHhh
Q 021158 46 YLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKL-----GIHQVFLVGHDWGALIAWYFCLFRPDRVKA 120 (316)
Q Consensus 46 ~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~ 120 (316)
.|. .|+.|+.+.+. ..+. ...+..+.......+++.+ +..+++|+|-|.||+.++.+|+.+|+.+.-
T Consensus 96 AL~-~GHPvYFV~F~-----p~P~--pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~gp 167 (581)
T PF11339_consen 96 ALR-AGHPVYFVGFF-----PEPE--PGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLVGP 167 (581)
T ss_pred HHH-cCCCeEEEEec-----CCCC--CCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCccCc
Confidence 444 48888887754 1111 2346777777666666655 334899999999999999999999998888
Q ss_pred hhhccCCCCCCC--CCccccchhhhhhccccchhhccCC-------cchHHHHhhhchH-HHHHHhhhccCCCCCCCCCC
Q 021158 121 LVNMSVPFPPRN--PAVRPLNNFRAVYGDDYYICRFQEP-------GEIEEEFAQIDTA-RLMKKFLCLRIPKPLCIPKD 190 (316)
Q Consensus 121 ~il~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 190 (316)
+|+-+++..... ....++......++..++.....+. ..+-..+..+.+. .++.+.+.....-.. ...
T Consensus 168 lvlaGaPlsywaG~~g~nPmRy~ggl~ggsw~~~l~sDlG~G~fdGa~lv~nFe~lnPa~~~w~K~y~Ly~~iD~--e~~ 245 (581)
T PF11339_consen 168 LVLAGAPLSYWAGERGDNPMRYMGGLLGGSWLTALVSDLGNGRFDGAWLVQNFENLNPANTYWSKYYDLYANIDT--ERE 245 (581)
T ss_pred eeecCCCcccccCCCCCCcHHHhcCCCcchHHHHHHHHcCCCccCcHHHHhhhhccChhHHHHHHHHHHHhccCC--chh
Confidence 887777665433 1223333333333444433222111 1122223333333 233333322111100 001
Q ss_pred CCCCCCCCCCCCCCCCChHHHHHHHHhhccCCcCcccccccccccccccccCCCCccccCcEEEEEeCCCcccCCCCcch
Q 021158 191 TGLSTLPDPSALPSWLSEEDVNYYASKFNQKGFTGPVNYYRCWDLNWELMAPWTGVQIKVPVKYIVGDQDLVYNNKGTKE 270 (316)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~ 270 (316)
.+.++- +.......++.+++......+-..+....-...... ... ..+++|+||+.++.|..|.++||+.+..
T Consensus 246 Rfl~FE-rWwgg~~~l~~~ei~~Iv~nLFvgNrL~~g~~~~~~--G~~----~DLr~Ir~Piivfas~gDnITPP~QaL~ 318 (581)
T PF11339_consen 246 RFLEFE-RWWGGFYDLNGEEILWIVENLFVGNRLAKGEFRVSD--GRR----VDLRNIRSPIIVFASYGDNITPPQQALN 318 (581)
T ss_pred hhhHHH-HHhCCccCCCHHHHHHHHHHHhccchhccCceeccC--CcE----eehhhCCCCEEEEeccCCCCCChhHhcc
Confidence 111110 000112234555555555443222111111100001 111 2233999999999999999999998755
Q ss_pred h
Q 021158 271 Y 271 (316)
Q Consensus 271 ~ 271 (316)
|
T Consensus 319 W 319 (581)
T PF11339_consen 319 W 319 (581)
T ss_pred c
Confidence 5
No 143
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.93 E-value=8.6e-09 Score=77.19 Aligned_cols=113 Identities=17% Similarity=0.205 Sum_probs=68.0
Q ss_pred CeeEEEEEeCC--------C-CeEEEEccCCCchhhhH-Hhh-------hhhhcCCceEEccCCCC-CCCCCCCCCCcch
Q 021158 13 GINMHVASIGT--------G-PAVLFIHGFPELWYSWR-NQL-------LYLSSRGYRAIAPDLRG-YGDTDAPPSVTSY 74 (316)
Q Consensus 13 g~~l~~~~~g~--------~-p~il~~HG~~~~~~~~~-~~~-------~~l~~~g~~v~~~D~~G-~G~s~~~~~~~~~ 74 (316)
|.+|-|+-.-+ - |.+||+||.|..+..-. .+. ....+.++-|+++.+-- +-.++.. ...
T Consensus 171 gneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~~---t~~ 247 (387)
T COG4099 171 GNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEEK---TLL 247 (387)
T ss_pred CceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEcccccccccccccc---cch
Confidence 66677765532 2 89999999986554322 221 12223344555555211 1112211 112
Q ss_pred hHHHHHHHHHHHH-HHhC--CcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCC
Q 021158 75 TALHLVGDLIGLL-DKLG--IHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPF 128 (316)
Q Consensus 75 ~~~~~~~~~~~~~-~~~~--~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~ 128 (316)
-....++-+.+.+ ++.+ ..+|.++|.|+||+.++.++.++|+.+.+.+++++..
T Consensus 248 ~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~ 304 (387)
T COG4099 248 YLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGG 304 (387)
T ss_pred hHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCC
Confidence 2233334444233 3333 3589999999999999999999999999999998744
No 144
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.91 E-value=2.8e-08 Score=76.44 Aligned_cols=108 Identities=17% Similarity=0.237 Sum_probs=77.0
Q ss_pred CCceeEEEeCCeeEEEEEeC-----CCCeEEEEccCCCchhhh-------HHhhhhhhcCCceEEccCCCCCCCCCCCCC
Q 021158 3 KIEHTTVATNGINMHVASIG-----TGPAVLFIHGFPELWYSW-------RNQLLYLSSRGYRAIAPDLRGYGDTDAPPS 70 (316)
Q Consensus 3 ~~~~~~~~~~g~~l~~~~~g-----~~p~il~~HG~~~~~~~~-------~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~ 70 (316)
++++..++.|+..|.-.... ++..||+.-|.+...+.. ..+.+...+.|-+|+.+++||.|.|....
T Consensus 111 ~~kRv~Iq~D~~~IDt~~I~~~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~- 189 (365)
T PF05677_consen 111 SVKRVPIQYDGVKIDTMAIHQPEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP- 189 (365)
T ss_pred ceeeEEEeeCCEEEEEEEeeCCCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC-
Confidence 34556677788888755443 246899999987665541 12233333457899999999999998766
Q ss_pred CcchhHHHHHHHHHHHHHHh-------CCcceEEEEecHHHHHHHHHHhhch
Q 021158 71 VTSYTALHLVGDLIGLLDKL-------GIHQVFLVGHDWGALIAWYFCLFRP 115 (316)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~-------~~~~~~l~G~S~Gg~~a~~~a~~~p 115 (316)
+.++++.|-.+.++.+ +.+.+++.|||+||.++..++.++.
T Consensus 190 ----s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~ 237 (365)
T PF05677_consen 190 ----SRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEV 237 (365)
T ss_pred ----CHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhcc
Confidence 3577777777777665 2357999999999999998666653
No 145
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.90 E-value=4.6e-09 Score=82.51 Aligned_cols=102 Identities=28% Similarity=0.399 Sum_probs=60.1
Q ss_pred CCeEEEEccCCCchhhh------------------HHhhhhhhcCCceEEccCCCCCCCCCCCCCC---cchhHHHHH--
Q 021158 24 GPAVLFIHGFPELWYSW------------------RNQLLYLSSRGYRAIAPDLRGYGDTDAPPSV---TSYTALHLV-- 80 (316)
Q Consensus 24 ~p~il~~HG~~~~~~~~------------------~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~---~~~~~~~~~-- 80 (316)
-|.||++||-++..+.. ..+...|+++||-|+++|.+|+|........ ..++.+.++
T Consensus 115 ~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~ 194 (390)
T PF12715_consen 115 FPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALARN 194 (390)
T ss_dssp EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHH
T ss_pred CCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccccccccccccccccchhHHHHHHH
Confidence 47999999987654331 1246789999999999999999987554311 111111111
Q ss_pred -------------HHHHHHHHHh------CCcceEEEEecHHHHHHHHHHhhchhHHhhhhhccC
Q 021158 81 -------------GDLIGLLDKL------GIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSV 126 (316)
Q Consensus 81 -------------~~~~~~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~ 126 (316)
-|....++.+ +.++|.++|+||||..++.+++..+ +|++.|..+-
T Consensus 195 ~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALDd-RIka~v~~~~ 258 (390)
T PF12715_consen 195 LLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALDD-RIKATVANGY 258 (390)
T ss_dssp HHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH-T-T--EEEEES-
T ss_pred HHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcch-hhHhHhhhhh
Confidence 2222334443 3458999999999999999999875 7887776553
No 146
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.90 E-value=7.5e-10 Score=87.65 Aligned_cols=105 Identities=20% Similarity=0.282 Sum_probs=62.2
Q ss_pred CCeEEEEccCCCch--hhhH-Hhhhhh-hc--CCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHh------C
Q 021158 24 GPAVLFIHGFPELW--YSWR-NQLLYL-SS--RGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKL------G 91 (316)
Q Consensus 24 ~p~il~~HG~~~~~--~~~~-~~~~~l-~~--~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~------~ 91 (316)
.|++|++||+.++. ..|. .+.+.+ .. ..++|+++||...-.. .............+.+..++..+ .
T Consensus 71 ~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~--~Y~~a~~n~~~vg~~la~~l~~L~~~~g~~ 148 (331)
T PF00151_consen 71 KPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASN--NYPQAVANTRLVGRQLAKFLSFLINNFGVP 148 (331)
T ss_dssp SEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS---HHHHHHHHHHHHHHHHHHHHHHHHHH---
T ss_pred CCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccc--cccchhhhHHHHHHHHHHHHHHHHhhcCCC
Confidence 58999999998876 3453 445544 44 4799999999632211 00001112333333444433332 3
Q ss_pred CcceEEEEecHHHHHHHHHHhhchh--HHhhhhhccCCCCC
Q 021158 92 IHQVFLVGHDWGALIAWYFCLFRPD--RVKALVNMSVPFPP 130 (316)
Q Consensus 92 ~~~~~l~G~S~Gg~~a~~~a~~~p~--~v~~~il~~~~~~~ 130 (316)
.++++|+|||+||.+|-.++..... ++.+++.++|+...
T Consensus 149 ~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~ 189 (331)
T PF00151_consen 149 PENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPL 189 (331)
T ss_dssp GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TT
T ss_pred hhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccccc
Confidence 4689999999999999999988776 89999999987653
No 147
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=98.88 E-value=1.4e-08 Score=84.76 Aligned_cols=122 Identities=13% Similarity=0.141 Sum_probs=78.2
Q ss_pred EEEeC---CeeEEEEEeC------CCCeEEEEccCCCchhhhHHhhh-------------------hhhcCCceEEccCC
Q 021158 8 TVATN---GINMHVASIG------TGPAVLFIHGFPELWYSWRNQLL-------------------YLSSRGYRAIAPDL 59 (316)
Q Consensus 8 ~~~~~---g~~l~~~~~g------~~p~il~~HG~~~~~~~~~~~~~-------------------~l~~~g~~v~~~D~ 59 (316)
.+.++ +..++|.-.. +.|.||++.|.++++..+..+.+ .+.+. .+++-+|.
T Consensus 15 yl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~-an~l~iD~ 93 (415)
T PF00450_consen 15 YLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKF-ANLLFIDQ 93 (415)
T ss_dssp EEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGT-SEEEEE--
T ss_pred EEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccccccccccCceEEeecccccccccccccccc-cceEEEee
Confidence 45555 6778876543 26999999999998887744321 11222 78999996
Q ss_pred C-CCCCCCCCCCC-cchhHHHHHHHHHHHHHHh-------CCcceEEEEecHHHHHHHHHHhhc----------hhHHhh
Q 021158 60 R-GYGDTDAPPSV-TSYTALHLVGDLIGLLDKL-------GIHQVFLVGHDWGALIAWYFCLFR----------PDRVKA 120 (316)
Q Consensus 60 ~-G~G~s~~~~~~-~~~~~~~~~~~~~~~~~~~-------~~~~~~l~G~S~Gg~~a~~~a~~~----------p~~v~~ 120 (316)
| |.|.|...... ...+.++.++++.++|..+ ...+++|.|.|+||..+..+|..- +-.++|
T Consensus 94 PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkG 173 (415)
T PF00450_consen 94 PVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKG 173 (415)
T ss_dssp STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEE
T ss_pred cCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhcccccccccccccc
Confidence 6 99999776532 2346777888888877765 445899999999998887776542 123677
Q ss_pred hhhccCCCCC
Q 021158 121 LVNMSVPFPP 130 (316)
Q Consensus 121 ~il~~~~~~~ 130 (316)
+++.++...+
T Consensus 174 i~IGng~~dp 183 (415)
T PF00450_consen 174 IAIGNGWIDP 183 (415)
T ss_dssp EEEESE-SBH
T ss_pred ceecCccccc
Confidence 7777765543
No 148
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.78 E-value=4.1e-07 Score=65.41 Aligned_cols=102 Identities=22% Similarity=0.298 Sum_probs=78.1
Q ss_pred CCeEEEEccCCCchh---hhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCC----cceE
Q 021158 24 GPAVLFIHGFPELWY---SWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGI----HQVF 96 (316)
Q Consensus 24 ~p~il~~HG~~~~~~---~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 96 (316)
...|||+-|++..-. ....+..+|.+.+|.++-+-++.+-. .....+..+-++|+..++++++. ..++
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~-----G~Gt~slk~D~edl~~l~~Hi~~~~fSt~vV 110 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYN-----GYGTFSLKDDVEDLKCLLEHIQLCGFSTDVV 110 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeecccccc-----ccccccccccHHHHHHHHHHhhccCcccceE
Confidence 357899999886543 35677889999999999998773321 11345777888999999998743 3799
Q ss_pred EEEecHHHHHHHHHHh--hchhHHhhhhhccCCCCC
Q 021158 97 LVGHDWGALIAWYFCL--FRPDRVKALVNMSVPFPP 130 (316)
Q Consensus 97 l~G~S~Gg~~a~~~a~--~~p~~v~~~il~~~~~~~ 130 (316)
|+|||.|+.=.+.+.. ..+..+++.|+.+|....
T Consensus 111 L~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDr 146 (299)
T KOG4840|consen 111 LVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDR 146 (299)
T ss_pred EEecCccchHHHHHHHhccchHHHHHHHHhCccchh
Confidence 9999999998888883 356789999999987654
No 149
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.77 E-value=3.8e-07 Score=67.01 Aligned_cols=104 Identities=23% Similarity=0.254 Sum_probs=72.1
Q ss_pred eEEEEccCCCchhhhHHhhhhhhcCC-----ceEEccCCCCC----CCCCCCC---------CCcchhHHHHHHHHHHHH
Q 021158 26 AVLFIHGFPELWYSWRNQLLYLSSRG-----YRAIAPDLRGY----GDTDAPP---------SVTSYTALHLVGDLIGLL 87 (316)
Q Consensus 26 ~il~~HG~~~~~~~~~~~~~~l~~~g-----~~v~~~D~~G~----G~s~~~~---------~~~~~~~~~~~~~~~~~~ 87 (316)
|.||+||.+++..+...++..|...+ --++.+|--|. |.=+... .....+..++...+..++
T Consensus 47 PTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~~m 126 (288)
T COG4814 47 PTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKKAM 126 (288)
T ss_pred ceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHHHH
Confidence 78999999999999999999888763 12445554441 1101110 012234455566666666
Q ss_pred HHh----CCcceEEEEecHHHHHHHHHHhhchh-----HHhhhhhccCCCC
Q 021158 88 DKL----GIHQVFLVGHDWGALIAWYFCLFRPD-----RVKALVNMSVPFP 129 (316)
Q Consensus 88 ~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~-----~v~~~il~~~~~~ 129 (316)
..+ +.+++.++||||||.-...++..+.. .++.+|.++++..
T Consensus 127 syL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 127 SYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 555 67799999999999999999987532 4899999998776
No 150
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.75 E-value=1.2e-08 Score=83.54 Aligned_cols=97 Identities=20% Similarity=0.212 Sum_probs=59.3
Q ss_pred CCeEEEEccCC----Cchhh--hHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHH--------H
Q 021158 24 GPAVLFIHGFP----ELWYS--WRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLD--------K 89 (316)
Q Consensus 24 ~p~il~~HG~~----~~~~~--~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~--------~ 89 (316)
.|.+|++||.+ .+..+ |........+. ..|.++|++.--. ..++...++.+..+.+ +
T Consensus 176 spl~i~aps~p~ap~tSd~~~~wqs~lsl~gev-vev~tfdl~n~ig--------G~nI~h~ae~~vSf~r~kvlei~ge 246 (784)
T KOG3253|consen 176 SPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEV-VEVPTFDLNNPIG--------GANIKHAAEYSVSFDRYKVLEITGE 246 (784)
T ss_pred CceEEeccCCCCCCccchHHHhHHHHHhhhcee-eeeccccccCCCC--------CcchHHHHHHHHHHhhhhhhhhhcc
Confidence 58899999987 12222 34444444444 6778888773211 1234444444444443 2
Q ss_pred hCCcceEEEEecHHHHHHHHHHhhchh-HHhhhhhccCCCC
Q 021158 90 LGIHQVFLVGHDWGALIAWYFCLFRPD-RVKALVNMSVPFP 129 (316)
Q Consensus 90 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~-~v~~~il~~~~~~ 129 (316)
+...+|+|+|.|||+.++.+......+ .|.++|.++-+..
T Consensus 247 fpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~ 287 (784)
T KOG3253|consen 247 FPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLD 287 (784)
T ss_pred CCCCceEEEecccCceeeEEeccccCCceEEEEEEeccccc
Confidence 344589999999998888777765443 4788888775443
No 151
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.74 E-value=9.2e-07 Score=69.87 Aligned_cols=123 Identities=16% Similarity=0.123 Sum_probs=76.7
Q ss_pred eEEEeCCeeEE--EEEeCCC---CeEEEEccCCCch---hhhHHhhhhhhcCCceEEccCCCCC--CCCCCC--------
Q 021158 7 TTVATNGINMH--VASIGTG---PAVLFIHGFPELW---YSWRNQLLYLSSRGYRAIAPDLRGY--GDTDAP-------- 68 (316)
Q Consensus 7 ~~~~~~g~~l~--~~~~g~~---p~il~~HG~~~~~---~~~~~~~~~l~~~g~~v~~~D~~G~--G~s~~~-------- 68 (316)
++++.++.++- |..+..+ -.||++||.+.+. ....++-..|.+.|+..+++.+|.- ......
T Consensus 65 ~~L~~~~~~flaL~~~~~~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~ 144 (310)
T PF12048_consen 65 QWLQAGEERFLALWRPANSAKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVP 144 (310)
T ss_pred EEeecCCEEEEEEEecccCCCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCC
Confidence 44555555543 3333222 3899999998775 3456777889999999999988861 100000
Q ss_pred ------CCCc--c---------h----hHHHHHHHHH---HHHHHhCCcceEEEEecHHHHHHHHHHhhchh-HHhhhhh
Q 021158 69 ------PSVT--S---------Y----TALHLVGDLI---GLLDKLGIHQVFLVGHDWGALIAWYFCLFRPD-RVKALVN 123 (316)
Q Consensus 69 ------~~~~--~---------~----~~~~~~~~~~---~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-~v~~~il 123 (316)
.... . - ....+.+-+. .+.+..+..+++|+||+.|+.+++.+....+. .+.++|+
T Consensus 145 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~ 224 (310)
T PF12048_consen 145 SAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVL 224 (310)
T ss_pred CCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEE
Confidence 0000 0 0 1122222222 33333465669999999999999999988765 5889999
Q ss_pred ccCCCC
Q 021158 124 MSVPFP 129 (316)
Q Consensus 124 ~~~~~~ 129 (316)
+++...
T Consensus 225 I~a~~p 230 (310)
T PF12048_consen 225 INAYWP 230 (310)
T ss_pred EeCCCC
Confidence 997543
No 152
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.74 E-value=1.7e-07 Score=70.72 Aligned_cols=122 Identities=20% Similarity=0.207 Sum_probs=83.5
Q ss_pred eEEEeCCeeEEEEEeCC------CCeEEEEccCCCchhhhHHhh--hhhh-cCCceEEccCCC-------CCCCCCCCC-
Q 021158 7 TTVATNGINMHVASIGT------GPAVLFIHGFPELWYSWRNQL--LYLS-SRGYRAIAPDLR-------GYGDTDAPP- 69 (316)
Q Consensus 7 ~~~~~~g~~l~~~~~g~------~p~il~~HG~~~~~~~~~~~~--~~l~-~~g~~v~~~D~~-------G~G~s~~~~- 69 (316)
..+..+|.+..|...-+ .|.||++||..++...+.... +.|+ ..||-|+.+|-- +.+.+..+.
T Consensus 38 ~s~~~~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~ 117 (312)
T COG3509 38 ASFDVNGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPAD 117 (312)
T ss_pred cccccCCCccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCccc
Confidence 34566777766654421 378999999999887766554 4454 348999999532 223332121
Q ss_pred -CCcchhHHHHHHHHHHHHHHhCCc--ceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCC
Q 021158 70 -SVTSYTALHLVGDLIGLLDKLGIH--QVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPF 128 (316)
Q Consensus 70 -~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~ 128 (316)
....-+...+.+.+..++.+.+++ +|++.|.|-||.++..++..+|+.+.++-.+++..
T Consensus 118 ~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 118 RRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred ccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 112234455555556666666776 79999999999999999999999998888777655
No 153
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.70 E-value=2e-08 Score=80.34 Aligned_cols=102 Identities=23% Similarity=0.316 Sum_probs=83.4
Q ss_pred CeEEEEccCCCchhhhHHhhhhhhcCCce---EEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCcceEEEEec
Q 021158 25 PAVLFIHGFPELWYSWRNQLLYLSSRGYR---AIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHD 101 (316)
Q Consensus 25 p~il~~HG~~~~~~~~~~~~~~l~~~g~~---v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S 101 (316)
-+++++||++.+...|..+...+...|+. ++.+++++- ....+ .....+.+.+.+.+++...+.+++.++|||
T Consensus 60 ~pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~---~~~~~~ql~~~V~~~l~~~ga~~v~LigHS 135 (336)
T COG1075 60 EPIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGG-DGTYS---LAVRGEQLFAYVDEVLAKTGAKKVNLIGHS 135 (336)
T ss_pred ceEEEEccCcCCcchhhhhhhhhcchHHHhccccccccccc-CCCcc---ccccHHHHHHHHHHHHhhcCCCceEEEeec
Confidence 38999999988889999888888887887 888888865 11111 344667777788888888899999999999
Q ss_pred HHHHHHHHHHhhch--hHHhhhhhccCCCCC
Q 021158 102 WGALIAWYFCLFRP--DRVKALVNMSVPFPP 130 (316)
Q Consensus 102 ~Gg~~a~~~a~~~p--~~v~~~il~~~~~~~ 130 (316)
|||..+..++...+ .+|+.++.++++-..
T Consensus 136 ~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~G 166 (336)
T COG1075 136 MGGLDSRYYLGVLGGANRVASVVTLGTPHHG 166 (336)
T ss_pred ccchhhHHHHhhcCccceEEEEEEeccCCCC
Confidence 99999999998887 789999999887653
No 154
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.68 E-value=1.7e-07 Score=70.93 Aligned_cols=103 Identities=16% Similarity=0.129 Sum_probs=63.4
Q ss_pred CCCeEEEEccCCCchhhh-HHh---hhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHH----hCCcc
Q 021158 23 TGPAVLFIHGFPELWYSW-RNQ---LLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDK----LGIHQ 94 (316)
Q Consensus 23 ~~p~il~~HG~~~~~~~~-~~~---~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 94 (316)
++..+||+||+..+...- ... ...+.-.| .++.+.||+.|.-..-.. ...+...-...+.++++. .+.++
T Consensus 17 ~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~-~~i~FsWPS~g~~~~Y~~-d~~~a~~s~~~l~~~L~~L~~~~~~~~ 94 (233)
T PF05990_consen 17 DKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPG-VVILFSWPSDGSLLGYFY-DRESARFSGPALARFLRDLARAPGIKR 94 (233)
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCc-eEEEEEcCCCCChhhhhh-hhhhHHHHHHHHHHHHHHHHhccCCce
Confidence 467999999999875542 222 22232232 799999998876322111 112333334444444444 36679
Q ss_pred eEEEEecHHHHHHHHHHhhch---------hHHhhhhhccCC
Q 021158 95 VFLVGHDWGALIAWYFCLFRP---------DRVKALVNMSVP 127 (316)
Q Consensus 95 ~~l~G~S~Gg~~a~~~a~~~p---------~~v~~~il~~~~ 127 (316)
|++++||||+.+.+.+..... .++..+|+++|-
T Consensus 95 I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApD 136 (233)
T PF05990_consen 95 IHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPD 136 (233)
T ss_pred EEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCC
Confidence 999999999999998765421 245666666653
No 155
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.65 E-value=3.3e-07 Score=76.24 Aligned_cols=117 Identities=18% Similarity=0.221 Sum_probs=81.8
Q ss_pred CCeeEEEEEe-----CCCCeEEEEccCCCchh-----hhHHhhh---hhhcCCceEEccCCCCCCCCCCCCCCcchh-HH
Q 021158 12 NGINMHVASI-----GTGPAVLFIHGFPELWY-----SWRNQLL---YLSSRGYRAIAPDLRGYGDTDAPPSVTSYT-AL 77 (316)
Q Consensus 12 ~g~~l~~~~~-----g~~p~il~~HG~~~~~~-----~~~~~~~---~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~-~~ 77 (316)
||++|+...+ |+.|+++..+-++-... ......+ .++.+||.||..|.||.|.|+...+. ..+ -.
T Consensus 28 DGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~~~-~~~~E~ 106 (563)
T COG2936 28 DGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVFDP-ESSREA 106 (563)
T ss_pred CCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCcccce-eccccc
Confidence 8999986554 33588888882222222 1122333 68889999999999999999987631 222 22
Q ss_pred HHHHHHHHHHHHh--CCcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCC
Q 021158 78 HLVGDLIGLLDKL--GIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFP 129 (316)
Q Consensus 78 ~~~~~~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 129 (316)
+-.-|+.+++... ...+|..+|.|++|...+.+|+..|..+++++...+...
T Consensus 107 ~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D 160 (563)
T COG2936 107 EDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVD 160 (563)
T ss_pred cchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeecccccccc
Confidence 2333555555554 335899999999999999999998888999988777655
No 156
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.65 E-value=3.7e-07 Score=67.46 Aligned_cols=56 Identities=16% Similarity=0.242 Sum_probs=46.9
Q ss_pred EEEEEeCCCcccCCCCcchhcccccccccccCcccEEEEcCCCcc-cchhhHHHHHHHHHHHHHh
Q 021158 252 VKYIVGDQDLVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHF-INQEKAEEVGAHIYEFIKK 315 (316)
Q Consensus 252 vl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~-~~~~~~~~~~~~i~~fl~~ 315 (316)
+.++.+++|..+|...... +++..|++ ++..+++ ||. .++-+.+.+.+.|.+-|++
T Consensus 309 ~ivv~A~~D~Yipr~gv~~------lQ~~WPg~-eVr~~eg-GHVsayl~k~dlfRR~I~d~L~R 365 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRS------LQEIWPGC-EVRYLEG-GHVSAYLFKQDLFRRAIVDGLDR 365 (371)
T ss_pred EEEEEecCCccccccCcHH------HHHhCCCC-EEEEeec-CceeeeehhchHHHHHHHHHHHh
Confidence 6778899999999977765 78999999 9999996 994 5666788999999887764
No 157
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.63 E-value=9.3e-08 Score=71.72 Aligned_cols=88 Identities=18% Similarity=0.201 Sum_probs=52.0
Q ss_pred CeEEEEccCCCchhhhHHhhhhhhcC--CceEEccCCCCCCCCCC-CCCCcchhHHHHHHHHHHHHHHhCC--cceEEEE
Q 021158 25 PAVLFIHGFPELWYSWRNQLLYLSSR--GYRAIAPDLRGYGDTDA-PPSVTSYTALHLVGDLIGLLDKLGI--HQVFLVG 99 (316)
Q Consensus 25 p~il~~HG~~~~~~~~~~~~~~l~~~--g~~v~~~D~~G~G~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~G 99 (316)
-.||++||+.++...|..+...+... .+.-..+...++..... ..+.-....+.+++.+.+.++.... .+++++|
T Consensus 5 hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~T~~gI~~~g~rL~~eI~~~~~~~~~~~~~IsfIg 84 (217)
T PF05057_consen 5 HLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNEFKTFDGIDVCGERLAEEILEHIKDYESKIRKISFIG 84 (217)
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhcccccccccchhhHHHHHHHHHHHHHhccccccccccceEEE
Confidence 47999999999999998887766651 12211222222211111 1110122334455555555555544 3899999
Q ss_pred ecHHHHHHHHHHh
Q 021158 100 HDWGALIAWYFCL 112 (316)
Q Consensus 100 ~S~Gg~~a~~~a~ 112 (316)
|||||.++-.+..
T Consensus 85 HSLGGli~r~al~ 97 (217)
T PF05057_consen 85 HSLGGLIARYALG 97 (217)
T ss_pred ecccHHHHHHHHH
Confidence 9999999876554
No 158
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.61 E-value=1.4e-07 Score=72.32 Aligned_cols=118 Identities=18% Similarity=0.257 Sum_probs=75.2
Q ss_pred eeEEEeCCeeEEEEE---e----CCC-CeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHH
Q 021158 6 HTTVATNGINMHVAS---I----GTG-PAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTAL 77 (316)
Q Consensus 6 ~~~~~~~g~~l~~~~---~----g~~-p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~ 77 (316)
-+..+.||-+|...- . |+| ..||++-|..+-.+. .....=++.||.|+.+++||++.|...+ ......
T Consensus 217 ~kiks~dgneiDtmF~d~r~n~~~ngq~LvIC~EGNAGFYEv--G~m~tP~~lgYsvLGwNhPGFagSTG~P--~p~n~~ 292 (517)
T KOG1553|consen 217 LKIKSSDGNEIDTMFLDGRPNQSGNGQDLVICFEGNAGFYEV--GVMNTPAQLGYSVLGWNHPGFAGSTGLP--YPVNTL 292 (517)
T ss_pred EEEeecCCcchhheeecCCCCCCCCCceEEEEecCCccceEe--eeecChHHhCceeeccCCCCccccCCCC--Ccccch
Confidence 344555666554321 1 223 366777775543221 1222223458999999999999998876 222222
Q ss_pred HHHHHHH-HHHHHhCC--cceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCC
Q 021158 78 HLVGDLI-GLLDKLGI--HQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPF 128 (316)
Q Consensus 78 ~~~~~~~-~~~~~~~~--~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~ 128 (316)
..++.+. -.+..++. +.|++.|||.||.-++.+|..+|+ |+++|+-++.-
T Consensus 293 nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-VkavvLDAtFD 345 (517)
T KOG1553|consen 293 NAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDATFD 345 (517)
T ss_pred HHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceEEEeecchh
Confidence 2333332 34455554 479999999999999999999996 89988766543
No 159
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.60 E-value=3.5e-07 Score=70.18 Aligned_cols=64 Identities=13% Similarity=0.117 Sum_probs=50.5
Q ss_pred cccCcEEEEEeCCCcccCCCCcchhcccccccccccCcccEEEEcCCCcccchh-hHHHHHHHHHHHH
Q 021158 247 QIKVPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQE-KAEEVGAHIYEFI 313 (316)
Q Consensus 247 ~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl 313 (316)
...+|-|+++++.|.+++.+..++..+ ...+..-++ +...++++.|..|+. +|++..+.+.+|+
T Consensus 176 ~~~~p~lylYS~~D~l~~~~~ve~~~~--~~~~~G~~V-~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 176 PSRCPRLYLYSKADPLIPWRDVEEHAE--EARRKGWDV-RAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCCeEEecCCCCcCcCHHHHHHHHH--HHHHcCCeE-EEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 567999999999999999998877543 222222335 788889999988775 8999999999885
No 160
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=98.56 E-value=1.3e-07 Score=69.08 Aligned_cols=81 Identities=21% Similarity=0.238 Sum_probs=55.7
Q ss_pred CCeEEEEccCCCchhhhHHhhhhhhcCCce-EEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCcceEEEEecH
Q 021158 24 GPAVLFIHGFPELWYSWRNQLLYLSSRGYR-AIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDW 102 (316)
Q Consensus 24 ~p~il~~HG~~~~~~~~~~~~~~l~~~g~~-v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 102 (316)
...||+..|+|++...+..+.. . .++. ++++|+|..- ++. + ..+.+++.|+|+||
T Consensus 11 ~~LilfF~GWg~d~~~f~hL~~--~-~~~D~l~~yDYr~l~------------~d~---~------~~~y~~i~lvAWSm 66 (213)
T PF04301_consen 11 KELILFFAGWGMDPSPFSHLIL--P-ENYDVLICYDYRDLD------------FDF---D------LSGYREIYLVAWSM 66 (213)
T ss_pred CeEEEEEecCCCChHHhhhccC--C-CCccEEEEecCcccc------------ccc---c------cccCceEEEEEEeH
Confidence 4689999999999888776542 1 2344 4678887321 110 1 12457899999999
Q ss_pred HHHHHHHHHhhchhHHhhhhhccCCCCC
Q 021158 103 GALIAWYFCLFRPDRVKALVNMSVPFPP 130 (316)
Q Consensus 103 Gg~~a~~~a~~~p~~v~~~il~~~~~~~ 130 (316)
|-++|..+....| ++..|.+++...+
T Consensus 67 GVw~A~~~l~~~~--~~~aiAINGT~~P 92 (213)
T PF04301_consen 67 GVWAANRVLQGIP--FKRAIAINGTPYP 92 (213)
T ss_pred HHHHHHHHhccCC--cceeEEEECCCCC
Confidence 9999988876554 6777778776554
No 161
>PLN02606 palmitoyl-protein thioesterase
Probab=98.55 E-value=1.9e-06 Score=66.16 Aligned_cols=101 Identities=18% Similarity=0.174 Sum_probs=66.5
Q ss_pred CCeEEEEccCC--CchhhhHHhhhhhhcC-CceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhC--CcceEEE
Q 021158 24 GPAVLFIHGFP--ELWYSWRNQLLYLSSR-GYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLG--IHQVFLV 98 (316)
Q Consensus 24 ~p~il~~HG~~--~~~~~~~~~~~~l~~~-g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~ 98 (316)
..|||+.||+| .+...+..+.+.+.+. |+.+.++- .|-+. ..+ ......+.++.+.+.+.... .+-++++
T Consensus 26 ~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~---~~s-~~~~~~~Qv~~vce~l~~~~~L~~G~naI 100 (306)
T PLN02606 26 SVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGV---QDS-LFMPLRQQASIACEKIKQMKELSEGYNIV 100 (306)
T ss_pred CCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCc---ccc-cccCHHHHHHHHHHHHhcchhhcCceEEE
Confidence 45899999999 4555677777777522 55554444 22221 110 12344555555555554421 1358999
Q ss_pred EecHHHHHHHHHHhhchh--HHhhhhhccCCCC
Q 021158 99 GHDWGALIAWYFCLFRPD--RVKALVNMSVPFP 129 (316)
Q Consensus 99 G~S~Gg~~a~~~a~~~p~--~v~~~il~~~~~~ 129 (316)
|+|.||.++-.++.+.|+ .|+.+|.++++..
T Consensus 101 GfSQGglflRa~ierc~~~p~V~nlISlggph~ 133 (306)
T PLN02606 101 AESQGNLVARGLIEFCDNAPPVINYVSLGGPHA 133 (306)
T ss_pred EEcchhHHHHHHHHHCCCCCCcceEEEecCCcC
Confidence 999999999999999876 4999999998654
No 162
>PLN02209 serine carboxypeptidase
Probab=98.52 E-value=9.3e-06 Score=67.21 Aligned_cols=65 Identities=15% Similarity=0.228 Sum_probs=49.1
Q ss_pred cCcEEEEEeCCCcccCCCCcchhccccc------------------ccccccC-cccEEEEcCCCcccchhhHHHHHHHH
Q 021158 249 KVPVKYIVGDQDLVYNNKGTKEYIHNGG------------------FKKYVPY-LQDVVVMEGVAHFINQEKAEEVGAHI 309 (316)
Q Consensus 249 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~~------------------~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~i 309 (316)
.++||+..|..|.+||.-..+.++.+-. ..+...+ . +++++.+|||++. .+|++..+.+
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~L-tfv~V~~AGHmVp-~qP~~al~m~ 428 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKM-TFATVKGGGHTAE-YLPEESSIMF 428 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCce-EEEEEcCCCCCcC-cCHHHHHHHH
Confidence 4799999999999999876665543211 1122333 5 7888999999996 6999999999
Q ss_pred HHHHHh
Q 021158 310 YEFIKK 315 (316)
Q Consensus 310 ~~fl~~ 315 (316)
..|+..
T Consensus 429 ~~fi~~ 434 (437)
T PLN02209 429 QRWISG 434 (437)
T ss_pred HHHHcC
Confidence 999864
No 163
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=98.46 E-value=5.1e-06 Score=68.71 Aligned_cols=65 Identities=12% Similarity=0.156 Sum_probs=48.9
Q ss_pred cCcEEEEEeCCCcccCCCCcchhcccccc------------------cccccC-cccEEEEcCCCcccchhhHHHHHHHH
Q 021158 249 KVPVKYIVGDQDLVYNNKGTKEYIHNGGF------------------KKYVPY-LQDVVVMEGVAHFINQEKAEEVGAHI 309 (316)
Q Consensus 249 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~------------------~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~i 309 (316)
.++||+..|..|.+||.-..+.++++-.+ .+...+ . +++++.+|||++. .+|+...+.+
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~l-tfv~V~~AGHmVp-~qP~~al~m~ 424 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKM-TFATIKAGGHTAE-YRPNETFIMF 424 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCce-EEEEEcCCCCCCC-CCHHHHHHHH
Confidence 58999999999999998776665432111 112222 4 7888899999996 6999999999
Q ss_pred HHHHHh
Q 021158 310 YEFIKK 315 (316)
Q Consensus 310 ~~fl~~ 315 (316)
..|++.
T Consensus 425 ~~Fi~~ 430 (433)
T PLN03016 425 QRWISG 430 (433)
T ss_pred HHHHcC
Confidence 999864
No 164
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.46 E-value=1.3e-06 Score=73.31 Aligned_cols=116 Identities=20% Similarity=0.261 Sum_probs=73.7
Q ss_pred eEEEEEeC-----CCCeEEEEccCCCchhhh--HHhhhhhhcC-CceEEccCCCCCCCCCCCC-----CCcchhHHHHHH
Q 021158 15 NMHVASIG-----TGPAVLFIHGFPELWYSW--RNQLLYLSSR-GYRAIAPDLRGYGDTDAPP-----SVTSYTALHLVG 81 (316)
Q Consensus 15 ~l~~~~~g-----~~p~il~~HG~~~~~~~~--~~~~~~l~~~-g~~v~~~D~~G~G~s~~~~-----~~~~~~~~~~~~ 81 (316)
+.+|.... .+|++|++-|=+.-...+ ..+...|+++ |-.++++.+|.+|.|.+.. .....+.++..+
T Consensus 15 ~qRY~~n~~~~~~~gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALa 94 (434)
T PF05577_consen 15 SQRYWVNDQYYKPGGPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALA 94 (434)
T ss_dssp EEEEEEE-TT--TTSEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHH
T ss_pred EEEEEEEhhhcCCCCCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHH
Confidence 34565443 256666665544322111 2244445443 7789999999999997654 234568899999
Q ss_pred HHHHHHHHhC-------CcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCC
Q 021158 82 DLIGLLDKLG-------IHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPP 130 (316)
Q Consensus 82 ~~~~~~~~~~-------~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~ 130 (316)
|+..+++++. ..|++++|.|.||++|..+-.++|+.|.|.+..+++...
T Consensus 95 D~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~a 150 (434)
T PF05577_consen 95 DLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQA 150 (434)
T ss_dssp HHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CCH
T ss_pred HHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceeee
Confidence 9999998763 238999999999999999999999999999988887654
No 165
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.40 E-value=3.7e-07 Score=70.72 Aligned_cols=106 Identities=19% Similarity=0.222 Sum_probs=64.6
Q ss_pred CeEEEEccCCCchhhh--HHhhhhhhcCC----ceEEccCCCCCCCCC--C----------CCCCcchh-HHHHHHHHHH
Q 021158 25 PAVLFIHGFPELWYSW--RNQLLYLSSRG----YRAIAPDLRGYGDTD--A----------PPSVTSYT-ALHLVGDLIG 85 (316)
Q Consensus 25 p~il~~HG~~~~~~~~--~~~~~~l~~~g----~~v~~~D~~G~G~s~--~----------~~~~~~~~-~~~~~~~~~~ 85 (316)
|+|+++||.......+ ...+..+.+.| ..+|+++..+.+... . ........ .+.+.+++..
T Consensus 25 PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~el~p 104 (251)
T PF00756_consen 25 PVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRRADDSGGGDAYETFLTEELIP 104 (251)
T ss_dssp EEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCBCTSTTTHHHHHHHHHTHHHH
T ss_pred EEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccccccCCCCcccceehhccchh
Confidence 8999999973222222 22233333332 445666655444111 0 00001112 2345567777
Q ss_pred HHHHh-CCc--ceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCC
Q 021158 86 LLDKL-GIH--QVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPP 130 (316)
Q Consensus 86 ~~~~~-~~~--~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~ 130 (316)
.++.. ... +..++|+||||..|+.++.++|+.+.+++.++|....
T Consensus 105 ~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~ 152 (251)
T PF00756_consen 105 YIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDP 152 (251)
T ss_dssp HHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESET
T ss_pred HHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccccc
Confidence 77654 322 2689999999999999999999999999999976544
No 166
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=98.38 E-value=1.5e-06 Score=71.30 Aligned_cols=110 Identities=21% Similarity=0.404 Sum_probs=68.4
Q ss_pred eCCeeEEEEEeCCCCeEEEEc-cCCCchhhhHHhhhhhhcCCceE------EccCCCCCCCCCCCCCCcchhHHHHHHHH
Q 021158 11 TNGINMHVASIGTGPAVLFIH-GFPELWYSWRNQLLYLSSRGYRA------IAPDLRGYGDTDAPPSVTSYTALHLVGDL 83 (316)
Q Consensus 11 ~~g~~l~~~~~g~~p~il~~H-G~~~~~~~~~~~~~~l~~~g~~v------~~~D~~G~G~s~~~~~~~~~~~~~~~~~~ 83 (316)
..|+.+.+...|..-.|-.+- ........|..+++.|.+.||.. .-+|+|=--. ..+++...+
T Consensus 37 ~~gv~i~~~~~g~~~~i~~ld~~~~~~~~~~~~li~~L~~~GY~~~~~l~~~pYDWR~~~~----------~~~~~~~~l 106 (389)
T PF02450_consen 37 DPGVEIRVPGFGGTSGIEYLDPSFITGYWYFAKLIENLEKLGYDRGKDLFAAPYDWRLSPA----------ERDEYFTKL 106 (389)
T ss_pred CCCceeecCCCCceeeeeecccccccccchHHHHHHHHHhcCcccCCEEEEEeechhhchh----------hHHHHHHHH
Confidence 456666665555322222221 11122227899999999887652 2378772111 233444445
Q ss_pred HHHHHHh---CCcceEEEEecHHHHHHHHHHhhch------hHHhhhhhccCCCCC
Q 021158 84 IGLLDKL---GIHQVFLVGHDWGALIAWYFCLFRP------DRVKALVNMSVPFPP 130 (316)
Q Consensus 84 ~~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p------~~v~~~il~~~~~~~ 130 (316)
...++.. ..++++|+||||||.++..+....+ +.|+++|.++++...
T Consensus 107 k~~ie~~~~~~~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~G 162 (389)
T PF02450_consen 107 KQLIEEAYKKNGKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFGG 162 (389)
T ss_pred HHHHHHHHHhcCCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCCC
Confidence 4444433 3579999999999999999888763 259999999987653
No 167
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.37 E-value=3e-06 Score=72.50 Aligned_cols=105 Identities=14% Similarity=0.058 Sum_probs=65.6
Q ss_pred CCeEEEEccCCC---chhhhHHhhhhhhcC--CceEEccCCC----CCCCCCCCCCCcch---hHHHHHHHHHHHHHHhC
Q 021158 24 GPAVLFIHGFPE---LWYSWRNQLLYLSSR--GYRAIAPDLR----GYGDTDAPPSVTSY---TALHLVGDLIGLLDKLG 91 (316)
Q Consensus 24 ~p~il~~HG~~~---~~~~~~~~~~~l~~~--g~~v~~~D~~----G~G~s~~~~~~~~~---~~~~~~~~~~~~~~~~~ 91 (316)
.|+||++||.+. +...+ ....|... |+.|+++++| |+..+......... +.....+.+.+-++..|
T Consensus 95 ~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~fg 172 (493)
T cd00312 95 LPVMVWIHGGGFMFGSGSLY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAAFG 172 (493)
T ss_pred CCEEEEEcCCccccCCCCCC--ChHHHHhcCCCEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHhC
Confidence 489999999753 22221 22333332 3899999998 33333221111222 33334444555555665
Q ss_pred C--cceEEEEecHHHHHHHHHHhh--chhHHhhhhhccCCCCC
Q 021158 92 I--HQVFLVGHDWGALIAWYFCLF--RPDRVKALVNMSVPFPP 130 (316)
Q Consensus 92 ~--~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~il~~~~~~~ 130 (316)
. ++|.|+|+|.||..+..++.. .+..++++|+.++....
T Consensus 173 gd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~~ 215 (493)
T cd00312 173 GDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSALS 215 (493)
T ss_pred CCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCccC
Confidence 4 479999999999999888776 34579999999876543
No 168
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.33 E-value=2.7e-06 Score=70.00 Aligned_cols=104 Identities=19% Similarity=0.240 Sum_probs=65.0
Q ss_pred CCeEEEEccCCCch-hhhHHhhhhhhcCC----ceEEccCCCCC-CCCCCCCCCcchhHHHHHHHHHHHHHHh-----CC
Q 021158 24 GPAVLFIHGFPELW-YSWRNQLLYLSSRG----YRAIAPDLRGY-GDTDAPPSVTSYTALHLVGDLIGLLDKL-----GI 92 (316)
Q Consensus 24 ~p~il~~HG~~~~~-~~~~~~~~~l~~~g----~~v~~~D~~G~-G~s~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 92 (316)
.|+|+++||..... ......++.|.+.| ..++.+|..+. .++..... ...-.+.+++++.-.+++. +.
T Consensus 209 ~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~-~~~f~~~l~~eLlP~I~~~y~~~~d~ 287 (411)
T PRK10439 209 RPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPC-NADFWLAVQQELLPQVRAIAPFSDDA 287 (411)
T ss_pred CCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCc-hHHHHHHHHHHHHHHHHHhCCCCCCc
Confidence 48999999954211 11223344555445 34677775321 11111110 1112344556666666654 33
Q ss_pred cceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCC
Q 021158 93 HQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPF 128 (316)
Q Consensus 93 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~ 128 (316)
++.+|.|+||||..|+.++.++|+.+.+++.+++..
T Consensus 288 ~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 288 DRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred cceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 468899999999999999999999999999999764
No 169
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.32 E-value=4.5e-05 Score=62.32 Aligned_cols=106 Identities=18% Similarity=0.155 Sum_probs=68.5
Q ss_pred CCeEEEEccCC---CchhhhHHhhhhhhcCC-ceEEccCCC----CCCC--C----CCCC-CCcchhHHHHHHHHHHHHH
Q 021158 24 GPAVLFIHGFP---ELWYSWRNQLLYLSSRG-YRAIAPDLR----GYGD--T----DAPP-SVTSYTALHLVGDLIGLLD 88 (316)
Q Consensus 24 ~p~il~~HG~~---~~~~~~~~~~~~l~~~g-~~v~~~D~~----G~G~--s----~~~~-~~~~~~~~~~~~~~~~~~~ 88 (316)
.|++|+|||.+ ++...-..--..|+++| +-||++++| |+=. + +... +..-.+.--..+.+.+-|+
T Consensus 94 ~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV~~NIe 173 (491)
T COG2272 94 LPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKWVRDNIE 173 (491)
T ss_pred CcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhccccccccccccHHHHHHHHHHHHHHHH
Confidence 49999999975 33333223345788887 899999987 2211 1 1100 0012233334456667777
Q ss_pred HhCCc--ceEEEEecHHHHHHHHHHhh--chhHHhhhhhccCCCC
Q 021158 89 KLGIH--QVFLVGHDWGALIAWYFCLF--RPDRVKALVNMSVPFP 129 (316)
Q Consensus 89 ~~~~~--~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~il~~~~~~ 129 (316)
++|.+ .|.|+|+|.||+.++.+.+. ....++++|+.++...
T Consensus 174 ~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 174 AFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 88765 69999999999988877664 2346889999988765
No 170
>COG3150 Predicted esterase [General function prediction only]
Probab=98.32 E-value=3.2e-06 Score=58.10 Aligned_cols=90 Identities=19% Similarity=0.322 Sum_probs=64.9
Q ss_pred EEEEccCCCchhhhHHhh--hhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCcceEEEEecHHH
Q 021158 27 VLFIHGFPELWYSWRNQL--LYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWGA 104 (316)
Q Consensus 27 il~~HG~~~~~~~~~~~~--~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg 104 (316)
||.+||+.+|........ ..+.+. .|-.+.+.+.. ..+....++.+..++...+.+.+.|+|.|+||
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~~--------~~~i~y~~p~l---~h~p~~a~~ele~~i~~~~~~~p~ivGssLGG 70 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDED--------VRDIEYSTPHL---PHDPQQALKELEKAVQELGDESPLIVGSSLGG 70 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhcc--------ccceeeecCCC---CCCHHHHHHHHHHHHHHcCCCCceEEeecchH
Confidence 899999999888776532 233333 22222222221 34678899999999999998889999999999
Q ss_pred HHHHHHHhhchhHHhhhhhccCCCCC
Q 021158 105 LIAWYFCLFRPDRVKALVNMSVPFPP 130 (316)
Q Consensus 105 ~~a~~~a~~~p~~v~~~il~~~~~~~ 130 (316)
..|.+++.++. +++ |+++|...+
T Consensus 71 Y~At~l~~~~G--ira-v~~NPav~P 93 (191)
T COG3150 71 YYATWLGFLCG--IRA-VVFNPAVRP 93 (191)
T ss_pred HHHHHHHHHhC--Chh-hhcCCCcCc
Confidence 99999999875 444 457876655
No 171
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=98.31 E-value=3e-05 Score=63.83 Aligned_cols=123 Identities=16% Similarity=0.095 Sum_probs=74.7
Q ss_pred eEEEeC---CeeEEEEEeCC------CCeEEEEccCCCchhhhHHhhhh------------hhcC------CceEEccCC
Q 021158 7 TTVATN---GINMHVASIGT------GPAVLFIHGFPELWYSWRNQLLY------------LSSR------GYRAIAPDL 59 (316)
Q Consensus 7 ~~~~~~---g~~l~~~~~g~------~p~il~~HG~~~~~~~~~~~~~~------------l~~~------g~~v~~~D~ 59 (316)
-.+.++ +..++|.-..+ .|.||++.|.++.+..- .+..+ |..+ --+++-+|.
T Consensus 47 GYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~ 125 (454)
T KOG1282|consen 47 GYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQ 125 (454)
T ss_pred ceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEcCCCCcceeCCccccccccEEEEec
Confidence 346665 78888874432 68999999998876543 22211 1110 146888888
Q ss_pred C-CCCCCCCCCCC-cchhHHHHHHHHHHHHHH----h---CCcceEEEEecHHHHHHHHHHhh----c-----h-hHHhh
Q 021158 60 R-GYGDTDAPPSV-TSYTALHLVGDLIGLLDK----L---GIHQVFLVGHDWGALIAWYFCLF----R-----P-DRVKA 120 (316)
Q Consensus 60 ~-G~G~s~~~~~~-~~~~~~~~~~~~~~~~~~----~---~~~~~~l~G~S~Gg~~a~~~a~~----~-----p-~~v~~ 120 (316)
| |.|.|-..... ...+-+..++|...++.. . ..+++.|.|-|.+|..+-.+|.. . | -.++|
T Consensus 126 PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG 205 (454)
T KOG1282|consen 126 PVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKG 205 (454)
T ss_pred CCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceE
Confidence 7 88888644321 112344445555554443 3 44689999999999777766653 1 1 24677
Q ss_pred hhhccCCCCC
Q 021158 121 LVNMSVPFPP 130 (316)
Q Consensus 121 ~il~~~~~~~ 130 (316)
+++-+|....
T Consensus 206 ~~IGNg~td~ 215 (454)
T KOG1282|consen 206 YAIGNGLTDP 215 (454)
T ss_pred EEecCcccCc
Confidence 7766665543
No 172
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.30 E-value=2.6e-06 Score=60.92 Aligned_cols=108 Identities=21% Similarity=0.246 Sum_probs=70.8
Q ss_pred CCeEEEEccCCCchhhhH---HhhhhhhcCCceEEccCCCCCCCCCCCCC----------------C----cchhH-HHH
Q 021158 24 GPAVLFIHGFPELWYSWR---NQLLYLSSRGYRAIAPDLRGYGDTDAPPS----------------V----TSYTA-LHL 79 (316)
Q Consensus 24 ~p~il~~HG~~~~~~~~~---~~~~~l~~~g~~v~~~D~~G~G~s~~~~~----------------~----~~~~~-~~~ 79 (316)
-|++.++-|+.++.+.+. .+...-.++|+.|+.+|-.-.|..-...+ . ..|.. +..
T Consensus 44 ~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYdYv 123 (283)
T KOG3101|consen 44 CPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYDYV 123 (283)
T ss_pred CceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHHHHH
Confidence 389999999998877663 23345567799999999643332211100 0 01111 223
Q ss_pred HHHHHHHHHHh----CCcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCCC
Q 021158 80 VGDLIGLLDKL----GIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPR 131 (316)
Q Consensus 80 ~~~~~~~~~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~ 131 (316)
++.+.+++..- +..++.+.||||||.=|+..+.+.|.+.+++-..+|..++.
T Consensus 124 ~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP~ 179 (283)
T KOG3101|consen 124 VKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNPI 179 (283)
T ss_pred HHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCcc
Confidence 34444444422 33478999999999999999999999988888888776653
No 173
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=98.30 E-value=7.6e-06 Score=65.43 Aligned_cols=59 Identities=14% Similarity=0.187 Sum_probs=48.9
Q ss_pred cccCcEEEEEeCCCcccCCCCcchhcccccccccccCcccEEEEcCCCcccchhhHHHHHHHHHHHHH
Q 021158 247 QIKVPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQEKAEEVGAHIYEFIK 314 (316)
Q Consensus 247 ~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 314 (316)
++++|.++|.|..|.+..+.....+ -..+|+.|.+..+|+++|..-. ..+.+.+..|+.
T Consensus 260 rL~~PK~ii~atgDeFf~pD~~~~y------~d~L~G~K~lr~vPN~~H~~~~---~~~~~~l~~f~~ 318 (367)
T PF10142_consen 260 RLTMPKYIINATGDEFFVPDSSNFY------YDKLPGEKYLRYVPNAGHSLIG---SDVVQSLRAFYN 318 (367)
T ss_pred hcCccEEEEecCCCceeccCchHHH------HhhCCCCeeEEeCCCCCcccch---HHHHHHHHHHHH
Confidence 7799999999999999999988765 3667777799999999998766 566677777765
No 174
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.21 E-value=1.2e-05 Score=68.86 Aligned_cols=101 Identities=22% Similarity=0.293 Sum_probs=58.8
Q ss_pred CCeEEEEccCCCchhhhHHhhhhhhc----------------CCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHH
Q 021158 24 GPAVLFIHGFPELWYSWRNQLLYLSS----------------RGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLL 87 (316)
Q Consensus 24 ~p~il~~HG~~~~~~~~~~~~~~l~~----------------~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~ 87 (316)
|-||+|++|..||...-+.++..... ..|.-+++|+-+ .-......+..+.++-+.+.+
T Consensus 89 GIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnE-----e~tAm~G~~l~dQtEYV~dAI 163 (973)
T KOG3724|consen 89 GIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNE-----EFTAMHGHILLDQTEYVNDAI 163 (973)
T ss_pred CceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccc-----hhhhhccHhHHHHHHHHHHHH
Confidence 56999999999988776666543331 124445555421 111112234444444444433
Q ss_pred HHh-----C--C------cceEEEEecHHHHHHHHHHhh---chhHHhhhhhccCCCC
Q 021158 88 DKL-----G--I------HQVFLVGHDWGALIAWYFCLF---RPDRVKALVNMSVPFP 129 (316)
Q Consensus 88 ~~~-----~--~------~~~~l~G~S~Gg~~a~~~a~~---~p~~v~~~il~~~~~~ 129 (316)
+.. + . ..|+++||||||.+|...+.. .++.|.-+|..++|..
T Consensus 164 k~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH~ 221 (973)
T KOG3724|consen 164 KYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPHA 221 (973)
T ss_pred HHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCccc
Confidence 322 2 1 139999999999999877753 2345677777776654
No 175
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=98.17 E-value=0.00011 Score=58.26 Aligned_cols=93 Identities=20% Similarity=0.216 Sum_probs=65.8
Q ss_pred eEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHH----hCCcceEEEEec
Q 021158 26 AVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDK----LGIHQVFLVGHD 101 (316)
Q Consensus 26 ~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~G~S 101 (316)
.-||+.|=|+-.+.=..+..+|.++|+.|+.+|-.=+-.|.+ +.++.++|+..+++. .+.+++.|+|.|
T Consensus 262 ~av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLRYfW~~r-------tPe~~a~Dl~r~i~~y~~~w~~~~~~liGyS 334 (456)
T COG3946 262 VAVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLRYFWSER-------TPEQIAADLSRLIRFYARRWGAKRVLLIGYS 334 (456)
T ss_pred EEEEEecCCchhhhhHHHHHHHHHCCCceeeeehhhhhhccC-------CHHHHHHHHHHHHHHHHHhhCcceEEEEeec
Confidence 456666655555555667889999999999999654444433 456677777777765 477799999999
Q ss_pred HHHHHHHHHHhhchh----HHhhhhhcc
Q 021158 102 WGALIAWYFCLFRPD----RVKALVNMS 125 (316)
Q Consensus 102 ~Gg~~a~~~a~~~p~----~v~~~il~~ 125 (316)
+|+-+.-....+.|. +|+.+.+++
T Consensus 335 fGADvlP~~~n~L~~~~r~~v~~~~ll~ 362 (456)
T COG3946 335 FGADVLPFAYNRLPPATRQRVRMVSLLG 362 (456)
T ss_pred ccchhhHHHHHhCCHHHHHHHHHHHHHh
Confidence 999888777666554 455555555
No 176
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.13 E-value=1.3e-05 Score=62.63 Aligned_cols=105 Identities=15% Similarity=0.196 Sum_probs=65.7
Q ss_pred CCeEEEEccCCCchhh-hHHhhhhhhcCC--ceEEccCCCCCCCCCCCC---CCcchhHHHHHHHHHHHHHHhCCcceEE
Q 021158 24 GPAVLFIHGFPELWYS-WRNQLLYLSSRG--YRAIAPDLRGYGDTDAPP---SVTSYTALHLVGDLIGLLDKLGIHQVFL 97 (316)
Q Consensus 24 ~p~il~~HG~~~~~~~-~~~~~~~l~~~g--~~v~~~D~~G~G~s~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l 97 (316)
+..+||+||+..+-+. -...+.-..+.| ...+.+-||..|.--.-. ....++-..+..-|..+.+....++|+|
T Consensus 116 k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I~i 195 (377)
T COG4782 116 KTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKRIYL 195 (377)
T ss_pred CeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCceEEE
Confidence 5689999999865432 333333333333 567888888766532111 1134455555555555555556789999
Q ss_pred EEecHHHHHHHHHHhh--------chhHHhhhhhccCCC
Q 021158 98 VGHDWGALIAWYFCLF--------RPDRVKALVNMSVPF 128 (316)
Q Consensus 98 ~G~S~Gg~~a~~~a~~--------~p~~v~~~il~~~~~ 128 (316)
++||||.++++....+ .+.+++-+|+-+|-.
T Consensus 196 lAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDi 234 (377)
T COG4782 196 LAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDI 234 (377)
T ss_pred EEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCC
Confidence 9999999999987754 234566777666543
No 177
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=98.12 E-value=2.8e-06 Score=55.32 Aligned_cols=59 Identities=17% Similarity=0.302 Sum_probs=51.1
Q ss_pred cCcEEEEEeCCCcccCCCCcchhcccccccccccCcccEEEEcCCCcccchhhHHHHHHHHHHHHH
Q 021158 249 KVPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQEKAEEVGAHIYEFIK 314 (316)
Q Consensus 249 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 314 (316)
..|+|++.++.|+++|.+..+. +++.++++ +++++++.||..+.....-+.+.+.+||.
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~------~~~~l~~s-~lvt~~g~gHg~~~~~s~C~~~~v~~yl~ 92 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARA------MAARLPGS-RLVTVDGAGHGVYAGGSPCVDKAVDDYLL 92 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHH------HHHHCCCc-eEEEEeccCcceecCCChHHHHHHHHHHH
Confidence 5899999999999999987765 78899998 99999999998886555677888888885
No 178
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=98.11 E-value=4.7e-05 Score=64.18 Aligned_cols=120 Identities=17% Similarity=0.206 Sum_probs=82.0
Q ss_pred eCCeeEEE----EE----eCCCCeEEEEccCCCchh--hhHHhhhhhhcCCceEEccCCCCCCCCCCCC------CCcch
Q 021158 11 TNGINMHV----AS----IGTGPAVLFIHGFPELWY--SWRNQLLYLSSRGYRAIAPDLRGYGDTDAPP------SVTSY 74 (316)
Q Consensus 11 ~~g~~l~~----~~----~g~~p~il~~HG~~~~~~--~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~------~~~~~ 74 (316)
.+|.++.+ +. .|++|.+|..-|.-+.+. .|....--|.++||--.....||=|.-...- -....
T Consensus 427 ~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~N 506 (682)
T COG1770 427 DDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKN 506 (682)
T ss_pred CCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhhhhhhccc
Confidence 36777653 32 234677777776543322 2443334567888766666677766443211 11456
Q ss_pred hHHHHHHHHHHHHHHh--CCcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCC
Q 021158 75 TALHLVGDLIGLLDKL--GIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPP 130 (316)
Q Consensus 75 ~~~~~~~~~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~ 130 (316)
++.|+++....+++.- ..+.++++|-|.||+++-..+.+.|+.++++|+--|....
T Consensus 507 Tf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDv 564 (682)
T COG1770 507 TFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDV 564 (682)
T ss_pred cHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccch
Confidence 8888888888888754 2347999999999999999999999999999988876654
No 179
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=98.00 E-value=0.0001 Score=58.91 Aligned_cols=65 Identities=12% Similarity=0.156 Sum_probs=48.1
Q ss_pred cCcEEEEEeCCCcccCCCCcchhccccc------------------ccccccC-cccEEEEcCCCcccchhhHHHHHHHH
Q 021158 249 KVPVKYIVGDQDLVYNNKGTKEYIHNGG------------------FKKYVPY-LQDVVVMEGVAHFINQEKAEEVGAHI 309 (316)
Q Consensus 249 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~~------------------~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~i 309 (316)
.++||+..|..|.+||.-..+.|+.+-. ..+...+ . ++.++.+|||++. .+|+...+.+
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~l-tf~~V~~AGHmV~-~qP~~al~m~ 310 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKM-TFATIKAGGHTAE-YRPNETFIMF 310 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcc-eEEEEcCCCCCCC-cCHHHHHHHH
Confidence 4899999999999998866655542211 1112222 5 7888889999996 5999999999
Q ss_pred HHHHHh
Q 021158 310 YEFIKK 315 (316)
Q Consensus 310 ~~fl~~ 315 (316)
..|++.
T Consensus 311 ~~fi~~ 316 (319)
T PLN02213 311 QRWISG 316 (319)
T ss_pred HHHHcC
Confidence 999864
No 180
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=98.00 E-value=0.00018 Score=57.16 Aligned_cols=63 Identities=17% Similarity=0.277 Sum_probs=46.6
Q ss_pred ccc-CcEEEEEeCCCcccCCCCcchhccccccccccc-CcccEEEEcCCCcccchhh-H--HHHHHHHHHHHHh
Q 021158 247 QIK-VPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYVP-YLQDVVVMEGVAHFINQEK-A--EEVGAHIYEFIKK 315 (316)
Q Consensus 247 ~i~-~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~-~--~~~~~~i~~fl~~ 315 (316)
.+. +|+|+++|..|..+|.......+. .... .. +...+++++|...... + ++..+.+.+|+.+
T Consensus 229 ~i~~~P~l~~~G~~D~~vp~~~~~~~~~-----~~~~~~~-~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~ 296 (299)
T COG1073 229 KISPRPVLLVHGERDEVVPLRDAEDLYE-----AARERPK-KLLFVPGGGHIDLYDNPPAVEQALDKLAEFLER 296 (299)
T ss_pred hcCCcceEEEecCCCcccchhhhHHHHh-----hhccCCc-eEEEecCCccccccCccHHHHHHHHHHHHHHHH
Confidence 454 799999999999999988877542 2212 33 7788889899877543 3 2788888888875
No 181
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.98 E-value=3.6e-05 Score=61.43 Aligned_cols=105 Identities=16% Similarity=0.146 Sum_probs=70.3
Q ss_pred CCeEEEEccCCCchhh-------hHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCcceE
Q 021158 24 GPAVLFIHGFPELWYS-------WRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVF 96 (316)
Q Consensus 24 ~p~il~~HG~~~~~~~-------~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (316)
.|+||++||+|-.-.. ...+...|.+ ..++++|+.-....+... .-.....+.++....+++..|.+.++
T Consensus 122 DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~~--~SILvLDYsLt~~~~~~~-~yPtQL~qlv~~Y~~Lv~~~G~~nI~ 198 (374)
T PF10340_consen 122 DPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLPE--VSILVLDYSLTSSDEHGH-KYPTQLRQLVATYDYLVESEGNKNII 198 (374)
T ss_pred CcEEEEEcCCeeEecCCHHHHHHHHHHHHHcCC--CeEEEEeccccccccCCC-cCchHHHHHHHHHHHHHhccCCCeEE
Confidence 5899999998743222 2223344442 588888876433000110 13446777888888888788889999
Q ss_pred EEEecHHHHHHHHHHhhch--h---HHhhhhhccCCCCCC
Q 021158 97 LVGHDWGALIAWYFCLFRP--D---RVKALVNMSVPFPPR 131 (316)
Q Consensus 97 l~G~S~Gg~~a~~~a~~~p--~---~v~~~il~~~~~~~~ 131 (316)
|+|-|.||.+++.+..... + .-+++|+++|...+.
T Consensus 199 LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 199 LMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred EEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 9999999999988765321 1 257889999877654
No 182
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.97 E-value=6.4e-05 Score=59.75 Aligned_cols=104 Identities=22% Similarity=0.244 Sum_probs=77.3
Q ss_pred CeEEEEccCCCchhhhHH---hhhhhh-cCCceEEccCCCCCCCCCCCCC--------CcchhHHHHHHHHHHHHHHhCC
Q 021158 25 PAVLFIHGFPELWYSWRN---QLLYLS-SRGYRAIAPDLRGYGDTDAPPS--------VTSYTALHLVGDLIGLLDKLGI 92 (316)
Q Consensus 25 p~il~~HG~~~~~~~~~~---~~~~l~-~~g~~v~~~D~~G~G~s~~~~~--------~~~~~~~~~~~~~~~~~~~~~~ 92 (316)
-+|+|.-|.-++.+.|.. ++-.++ +.+--+|-..+|-+|+|-+-.+ ..-.+.++..+|..+++.++..
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~ 160 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKR 160 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhh
Confidence 578888998777666532 222222 2356688899999999965432 1234677888888888887743
Q ss_pred ------cceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCC
Q 021158 93 ------HQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPF 128 (316)
Q Consensus 93 ------~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~ 128 (316)
.+++.+|.|.||+++..+=.++|+.+.|.+..+.|.
T Consensus 161 ~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPv 202 (492)
T KOG2183|consen 161 DLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPV 202 (492)
T ss_pred ccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCce
Confidence 379999999999999999999999998888777654
No 183
>PLN02633 palmitoyl protein thioesterase family protein
Probab=97.95 E-value=3e-05 Score=59.82 Aligned_cols=102 Identities=14% Similarity=0.142 Sum_probs=67.2
Q ss_pred CCCeEEEEccCCCchh--hhHHhhhhhhcC-CceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhC--CcceEE
Q 021158 23 TGPAVLFIHGFPELWY--SWRNQLLYLSSR-GYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLG--IHQVFL 97 (316)
Q Consensus 23 ~~p~il~~HG~~~~~~--~~~~~~~~l~~~-g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l 97 (316)
...|+|+.||+|++.. ....+.+.+.+. |..+.++.. |.+. .+.......+.++.+.+.+.... .+-+++
T Consensus 24 ~~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~~--~~s~~~~~~~Qve~vce~l~~~~~l~~G~na 98 (314)
T PLN02633 24 VSVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNGV--GDSWLMPLTQQAEIACEKVKQMKELSQGYNI 98 (314)
T ss_pred CCCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCCc--cccceeCHHHHHHHHHHHHhhchhhhCcEEE
Confidence 3468999999997654 344455555332 566666543 3331 11123345566666655555421 135899
Q ss_pred EEecHHHHHHHHHHhhchh--HHhhhhhccCCCC
Q 021158 98 VGHDWGALIAWYFCLFRPD--RVKALVNMSVPFP 129 (316)
Q Consensus 98 ~G~S~Gg~~a~~~a~~~p~--~v~~~il~~~~~~ 129 (316)
+|+|.||.++-.++.+.|+ .|+.+|.++++..
T Consensus 99 IGfSQGGlflRa~ierc~~~p~V~nlISlggph~ 132 (314)
T PLN02633 99 VGRSQGNLVARGLIEFCDGGPPVYNYISLAGPHA 132 (314)
T ss_pred EEEccchHHHHHHHHHCCCCCCcceEEEecCCCC
Confidence 9999999999999999886 5999999998654
No 184
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=97.95 E-value=2.6e-06 Score=64.88 Aligned_cols=104 Identities=14% Similarity=0.092 Sum_probs=55.1
Q ss_pred CeEEEEccCCCch---hhhHHhhhhhhcC--CceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCC--cceEE
Q 021158 25 PAVLFIHGFPELW---YSWRNQLLYLSSR--GYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGI--HQVFL 97 (316)
Q Consensus 25 p~il~~HG~~~~~---~~~~~~~~~l~~~--g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l 97 (316)
.|||+.||+|.+. ..+..+...+.+. |..|.+++.-....++... .-.....+.++.+.+.++.... +-+++
T Consensus 6 ~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig~~~~~D~~~-s~f~~v~~Qv~~vc~~l~~~p~L~~G~~~ 84 (279)
T PF02089_consen 6 LPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIGNDPSEDVEN-SFFGNVNDQVEQVCEQLANDPELANGFNA 84 (279)
T ss_dssp --EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SSSSHHHHHHH-HHHSHHHHHHHHHHHHHHH-GGGTT-EEE
T ss_pred CcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEECCCcchhhhh-hHHHHHHHHHHHHHHHHhhChhhhcceee
Confidence 4899999999753 3455554444332 6777777753211111000 0112445566666666654321 35999
Q ss_pred EEecHHHHHHHHHHhhchh-HHhhhhhccCCCC
Q 021158 98 VGHDWGALIAWYFCLFRPD-RVKALVNMSVPFP 129 (316)
Q Consensus 98 ~G~S~Gg~~a~~~a~~~p~-~v~~~il~~~~~~ 129 (316)
+|+|.||.++-.++.+.|+ .|+.+|.++++..
T Consensus 85 IGfSQGgl~lRa~vq~c~~~~V~nlISlggph~ 117 (279)
T PF02089_consen 85 IGFSQGGLFLRAYVQRCNDPPVHNLISLGGPHM 117 (279)
T ss_dssp EEETCHHHHHHHHHHH-TSS-EEEEEEES--TT
T ss_pred eeeccccHHHHHHHHHCCCCCceeEEEecCccc
Confidence 9999999999999999865 6999999987654
No 185
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.95 E-value=2.6e-05 Score=58.23 Aligned_cols=98 Identities=19% Similarity=0.231 Sum_probs=66.9
Q ss_pred CeEEEEccCCCchhh--hHHhhhhhhcC-CceEEccCCCCCC--CCCCCCCCcchhHHHHHHHHHHHHHHhC--CcceEE
Q 021158 25 PAVLFIHGFPELWYS--WRNQLLYLSSR-GYRAIAPDLRGYG--DTDAPPSVTSYTALHLVGDLIGLLDKLG--IHQVFL 97 (316)
Q Consensus 25 p~il~~HG~~~~~~~--~~~~~~~l~~~-g~~v~~~D~~G~G--~s~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l 97 (316)
-|+|++||++++... +..+.+.+.+. |..|++.|.- -| .| ......+.++.+.+.++... .+-+.+
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~leig-~g~~~s------~l~pl~~Qv~~~ce~v~~m~~lsqGyni 96 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEIG-DGIKDS------SLMPLWEQVDVACEKVKQMPELSQGYNI 96 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEec-CCcchh------hhccHHHHHHHHHHHHhcchhccCceEE
Confidence 589999999987665 66666666654 7888888853 33 22 12234445555544444321 135899
Q ss_pred EEecHHHHHHHHHHhhchh-HHhhhhhccCCCC
Q 021158 98 VGHDWGALIAWYFCLFRPD-RVKALVNMSVPFP 129 (316)
Q Consensus 98 ~G~S~Gg~~a~~~a~~~p~-~v~~~il~~~~~~ 129 (316)
+|.|.||.++-.++..-++ .|+.+|.++++..
T Consensus 97 vg~SQGglv~Raliq~cd~ppV~n~ISL~gPha 129 (296)
T KOG2541|consen 97 VGYSQGGLVARALIQFCDNPPVKNFISLGGPHA 129 (296)
T ss_pred EEEccccHHHHHHHHhCCCCCcceeEeccCCcC
Confidence 9999999999999987554 5888898887654
No 186
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=97.94 E-value=2.5e-05 Score=63.21 Aligned_cols=89 Identities=21% Similarity=0.337 Sum_probs=61.3
Q ss_pred hhhHHhhhhhhcCCce------EEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCcceEEEEecHHHHHHHHHH
Q 021158 38 YSWRNQLLYLSSRGYR------AIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFC 111 (316)
Q Consensus 38 ~~~~~~~~~l~~~g~~------v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a 111 (316)
..|..+++.|..-||. -..+|+|= |.......+..+..+..-+....+.-|.+|++|++||||+.+.+.+.
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRl---s~~~~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl 200 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRL---SYHNSEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFL 200 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhh---ccCChhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHH
Confidence 4688889999888876 46788882 11211112334444444444444445778999999999999999999
Q ss_pred hhchh--------HHhhhhhccCCCC
Q 021158 112 LFRPD--------RVKALVNMSVPFP 129 (316)
Q Consensus 112 ~~~p~--------~v~~~il~~~~~~ 129 (316)
..+++ .++++|.++++..
T Consensus 201 ~w~~~~~~~W~~k~I~sfvnig~p~l 226 (473)
T KOG2369|consen 201 KWVEAEGPAWCDKYIKSFVNIGAPWL 226 (473)
T ss_pred hcccccchhHHHHHHHHHHccCchhc
Confidence 87765 4888888887654
No 187
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=97.93 E-value=0.00042 Score=58.43 Aligned_cols=108 Identities=19% Similarity=0.154 Sum_probs=75.8
Q ss_pred CCCeEEEEccCCCch--hhhHHhhhhhhcCCceEEccCCCCCCCCCCCC------CCcchhHHHHHHHHHHHHHHh--CC
Q 021158 23 TGPAVLFIHGFPELW--YSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPP------SVTSYTALHLVGDLIGLLDKL--GI 92 (316)
Q Consensus 23 ~~p~il~~HG~~~~~--~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~------~~~~~~~~~~~~~~~~~~~~~--~~ 92 (316)
+.|.+|..+|.-+-+ -.|..--.-|.++|+.....|.||=|.-...- .....+++|++..+..+++.- .-
T Consensus 469 ~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~ 548 (712)
T KOG2237|consen 469 SKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQP 548 (712)
T ss_pred CCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHcCCCCc
Confidence 457766666643322 12443334455689888888999876543211 113557888888888877753 33
Q ss_pred cceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCC
Q 021158 93 HQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPP 130 (316)
Q Consensus 93 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~ 130 (316)
++..+.|.|.||.++..++.++|+.+.++|+--|....
T Consensus 549 ~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmDv 586 (712)
T KOG2237|consen 549 SKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMDV 586 (712)
T ss_pred cceeEecccCccchhHHHhccCchHhhhhhhcCcceeh
Confidence 57899999999999999999999999999987776543
No 188
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=97.90 E-value=3.6e-05 Score=64.08 Aligned_cols=122 Identities=16% Similarity=0.158 Sum_probs=78.8
Q ss_pred ceeEEEe-CCeeEEEEEeC------CCCeEEEEccCCCch--hhhHHhhhhhhcCCceEEccCCCCCCCCCCCC------
Q 021158 5 EHTTVAT-NGINMHVASIG------TGPAVLFIHGFPELW--YSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPP------ 69 (316)
Q Consensus 5 ~~~~~~~-~g~~l~~~~~g------~~p~il~~HG~~~~~--~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~------ 69 (316)
++.+.+. ||++|.|...+ +.|++|.--|.-.-+ -.|.+....+.++|..-+..+.||=|.=.+.-
T Consensus 395 eQ~~atSkDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k 474 (648)
T COG1505 395 EQFFATSKDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMK 474 (648)
T ss_pred EEEEEEcCCCccccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhh
Confidence 3444444 89999998764 257776655543221 23555557777888888889999876432210
Q ss_pred CCcchhHHHHHHHHHHHHHHhCC---cceEEEEecHHHHHHHHHHhhchhHHhhhhhccCC
Q 021158 70 SVTSYTALHLVGDLIGLLDKLGI---HQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVP 127 (316)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~ 127 (316)
......++|+++-...+++. |+ +++.+.|-|-||.+.-.+..++|+.+.++|+--|.
T Consensus 475 ~nrq~vfdDf~AVaedLi~r-gitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPl 534 (648)
T COG1505 475 ENKQNVFDDFIAVAEDLIKR-GITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPL 534 (648)
T ss_pred hcchhhhHHHHHHHHHHHHh-CCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccch
Confidence 11233445554444444443 33 47899999999999999999999988777755543
No 189
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.88 E-value=5.1e-05 Score=63.66 Aligned_cols=84 Identities=25% Similarity=0.349 Sum_probs=54.5
Q ss_pred hhHHhhhhhhcCCce-----EEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHh----CCcceEEEEecHHHHHHHH
Q 021158 39 SWRNQLLYLSSRGYR-----AIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKL----GIHQVFLVGHDWGALIAWY 109 (316)
Q Consensus 39 ~~~~~~~~l~~~g~~-----v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~G~S~Gg~~a~~ 109 (316)
.|..+++.|++.||. ...||+|=. .. ....-+++...+..+++.. +.+|++|+||||||.+++.
T Consensus 157 vw~kLIe~L~~iGY~~~nL~gAPYDWRls---~~----~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~ly 229 (642)
T PLN02517 157 VWAVLIANLARIGYEEKNMYMAAYDWRLS---FQ----NTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLH 229 (642)
T ss_pred eHHHHHHHHHHcCCCCCceeecccccccC---cc----chhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHH
Confidence 578999999999885 334455511 10 1112234444444444433 4579999999999999998
Q ss_pred HHhhc-----------h----hHHhhhhhccCCCC
Q 021158 110 FCLFR-----------P----DRVKALVNMSVPFP 129 (316)
Q Consensus 110 ~a~~~-----------p----~~v~~~il~~~~~~ 129 (316)
+...- + ..|++.|.++++..
T Consensus 230 FL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~l 264 (642)
T PLN02517 230 FMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFL 264 (642)
T ss_pred HHHhccccccccCCcchHHHHHHHHHheecccccC
Confidence 76531 1 25899999998754
No 190
>COG0627 Predicted esterase [General function prediction only]
Probab=97.85 E-value=6.9e-05 Score=59.09 Aligned_cols=108 Identities=19% Similarity=0.246 Sum_probs=69.8
Q ss_pred CeEEEEccCCCchhhh---HHhhhhhhcCCceEEccCCC--------------CCCCCCCCCC------CcchhHHHH-H
Q 021158 25 PAVLFIHGFPELWYSW---RNQLLYLSSRGYRAIAPDLR--------------GYGDTDAPPS------VTSYTALHL-V 80 (316)
Q Consensus 25 p~il~~HG~~~~~~~~---~~~~~~l~~~g~~v~~~D~~--------------G~G~s~~~~~------~~~~~~~~~-~ 80 (316)
|+++++||..++...+ ..+-+...+.|..++++|-. |-+.|--... ...+.++++ .
T Consensus 55 pV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~tfl~ 134 (316)
T COG0627 55 PVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWETFLT 134 (316)
T ss_pred CEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhHHHH
Confidence 7889999998875443 33445556667888887432 3333211110 011444433 3
Q ss_pred HHHHHHHHH-hCC----cceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCCCC
Q 021158 81 GDLIGLLDK-LGI----HQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRN 132 (316)
Q Consensus 81 ~~~~~~~~~-~~~----~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~ 132 (316)
+++-..+++ ... ++..++||||||.=|+.+|.++|++++.+...++...+..
T Consensus 135 ~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s~ 191 (316)
T COG0627 135 QELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPSS 191 (316)
T ss_pred hhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceeccccccccccc
Confidence 445534443 321 2688999999999999999999999999999998877653
No 191
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=97.79 E-value=5e-05 Score=65.87 Aligned_cols=105 Identities=16% Similarity=0.090 Sum_probs=61.2
Q ss_pred CeEEEEccCCC---ch-hhhHHhhhhhhcCCceEEccCCC----CCCCCCCCCCC-cchhHHHHHH---HHHHHHHHhCC
Q 021158 25 PAVLFIHGFPE---LW-YSWRNQLLYLSSRGYRAIAPDLR----GYGDTDAPPSV-TSYTALHLVG---DLIGLLDKLGI 92 (316)
Q Consensus 25 p~il~~HG~~~---~~-~~~~~~~~~l~~~g~~v~~~D~~----G~G~s~~~~~~-~~~~~~~~~~---~~~~~~~~~~~ 92 (316)
|++|+|||.+. +. .....-...+.+++.-||++++| |+-.+...... ..+...|+.. .+.+-|..+|.
T Consensus 126 PV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGG 205 (535)
T PF00135_consen 126 PVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNIAAFGG 205 (535)
T ss_dssp EEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGGGGTE
T ss_pred ceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhhhhccc
Confidence 89999999753 22 12233344556678999999998 44333322211 3455555444 44455555665
Q ss_pred c--ceEEEEecHHHHHHHHHHhhc--hhHHhhhhhccCCCC
Q 021158 93 H--QVFLVGHDWGALIAWYFCLFR--PDRVKALVNMSVPFP 129 (316)
Q Consensus 93 ~--~~~l~G~S~Gg~~a~~~a~~~--p~~v~~~il~~~~~~ 129 (316)
+ +|.|+|||.||..+...+... ...++++|+.++...
T Consensus 206 Dp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~~ 246 (535)
T PF00135_consen 206 DPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSAL 246 (535)
T ss_dssp EEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--TT
T ss_pred CCcceeeeeecccccccceeeeccccccccccccccccccc
Confidence 4 699999999998887766652 236888999888544
No 192
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=97.76 E-value=0.0046 Score=51.15 Aligned_cols=107 Identities=16% Similarity=0.079 Sum_probs=71.7
Q ss_pred CCeEEEEccCCCchhhhHHhhh-------------------hhhcCCceEEccCCC-CCCCCCCCCCCcchhHHHHHHHH
Q 021158 24 GPAVLFIHGFPELWYSWRNQLL-------------------YLSSRGYRAIAPDLR-GYGDTDAPPSVTSYTALHLVGDL 83 (316)
Q Consensus 24 ~p~il~~HG~~~~~~~~~~~~~-------------------~l~~~g~~v~~~D~~-G~G~s~~~~~~~~~~~~~~~~~~ 83 (316)
.|.|+++.|.++++..|-.+.+ -+.+. -.++-+|+| |.|.|....+...-++....+|+
T Consensus 101 rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~-adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~D~ 179 (498)
T COG2939 101 RPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDF-ADLVFIDQPVGTGFSRALGDEKKKDFEGAGKDV 179 (498)
T ss_pred CceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccC-CceEEEecCcccCcccccccccccchhccchhH
Confidence 5899999999998888765521 01122 368889954 88988753333444555555565
Q ss_pred HHHHHHh-------C--CcceEEEEecHHHHHHHHHHhhchhH---HhhhhhccCCCCCC
Q 021158 84 IGLLDKL-------G--IHQVFLVGHDWGALIAWYFCLFRPDR---VKALVNMSVPFPPR 131 (316)
Q Consensus 84 ~~~~~~~-------~--~~~~~l~G~S~Gg~~a~~~a~~~p~~---v~~~il~~~~~~~~ 131 (316)
..+.+.+ . ..+.+|+|.|+||.-+..+|..--++ .+++|++.+.....
T Consensus 180 ~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvlign 239 (498)
T COG2939 180 YSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLIGN 239 (498)
T ss_pred HHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeeecC
Confidence 5555433 2 24899999999999888888765443 67777776655443
No 193
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.73 E-value=0.00017 Score=58.98 Aligned_cols=108 Identities=19% Similarity=0.273 Sum_probs=83.4
Q ss_pred CCCeEEEEccCCCchhhhH-----HhhhhhhcCCceEEccCCCCCCCCCCCCC-----CcchhHHHHHHHHHHHHHHhCC
Q 021158 23 TGPAVLFIHGFPELWYSWR-----NQLLYLSSRGYRAIAPDLRGYGDTDAPPS-----VTSYTALHLVGDLIGLLDKLGI 92 (316)
Q Consensus 23 ~~p~il~~HG~~~~~~~~~-----~~~~~l~~~g~~v~~~D~~G~G~s~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 92 (316)
.+|..|+|-|=+.-...|- .....-.+.|-.|+...+|-+|.|.+..+ ....+..+...|+.+++++++.
T Consensus 85 ~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~ 164 (514)
T KOG2182|consen 85 GGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNA 164 (514)
T ss_pred CCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHh
Confidence 4788888888765554442 22233345588999999999998866543 2345788999999999998732
Q ss_pred -------cceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCC
Q 021158 93 -------HQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPP 130 (316)
Q Consensus 93 -------~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~ 130 (316)
.|.+.+|.|+-|.++..+=.++|+.+.|.|..+++...
T Consensus 165 k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~A 209 (514)
T KOG2182|consen 165 KFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVLA 209 (514)
T ss_pred hcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccceeE
Confidence 27899999999999999999999999999988877653
No 194
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.70 E-value=0.00024 Score=57.08 Aligned_cols=35 Identities=14% Similarity=0.191 Sum_probs=29.8
Q ss_pred ceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCC
Q 021158 94 QVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPF 128 (316)
Q Consensus 94 ~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~ 128 (316)
|++++|+|.||.+|..+|.-.|..+.++|=-++..
T Consensus 185 p~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~ 219 (403)
T PF11144_consen 185 PKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYA 219 (403)
T ss_pred cEEEEecCcHHHHHHHHHhhCccceeEEEecCccc
Confidence 89999999999999999999998888887544433
No 195
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=97.69 E-value=0.00068 Score=51.53 Aligned_cols=103 Identities=12% Similarity=0.066 Sum_probs=74.1
Q ss_pred CCeEEEEccCCCchhh-hHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCcceEEEEecH
Q 021158 24 GPAVLFIHGFPELWYS-WRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDW 102 (316)
Q Consensus 24 ~p~il~~HG~~~~~~~-~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 102 (316)
.|.||++-.+.++... .+..++.|... ..|+.-||-.--.-+... ..++.+++++-+.++++.+|.+ +++++.|.
T Consensus 103 dPkvLivapmsGH~aTLLR~TV~alLp~-~~vyitDW~dAr~Vp~~~--G~FdldDYIdyvie~~~~~Gp~-~hv~aVCQ 178 (415)
T COG4553 103 DPKVLIVAPMSGHYATLLRGTVEALLPY-HDVYITDWVDARMVPLEA--GHFDLDDYIDYVIEMINFLGPD-AHVMAVCQ 178 (415)
T ss_pred CCeEEEEecccccHHHHHHHHHHHhccc-cceeEeeccccceeeccc--CCccHHHHHHHHHHHHHHhCCC-CcEEEEec
Confidence 3677777777666544 56677777765 688888886443333233 6789999999999999999955 88999988
Q ss_pred HHHHHHH-----HHhhchhHHhhhhhccCCCCC
Q 021158 103 GALIAWY-----FCLFRPDRVKALVNMSVPFPP 130 (316)
Q Consensus 103 Gg~~a~~-----~a~~~p~~v~~~il~~~~~~~ 130 (316)
-+.-.+. .+...|..-..+++++++...
T Consensus 179 P~vPvLAAisLM~~~~~p~~PssMtlmGgPIDa 211 (415)
T COG4553 179 PTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDA 211 (415)
T ss_pred CCchHHHHHHHHHhcCCCCCCceeeeecCcccc
Confidence 7644433 333456667888999988764
No 196
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.51 E-value=0.00016 Score=51.19 Aligned_cols=53 Identities=19% Similarity=0.172 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHh----CCcceEEEEecHHHHHHHHHHhhchh----HHhhhhhccCCCC
Q 021158 77 LHLVGDLIGLLDKL----GIHQVFLVGHDWGALIAWYFCLFRPD----RVKALVNMSVPFP 129 (316)
Q Consensus 77 ~~~~~~~~~~~~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~----~v~~~il~~~~~~ 129 (316)
..+.+.+...++.. ...+++++|||+||.+|..++...+. ....++.++++..
T Consensus 8 ~~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~ 68 (153)
T cd00741 8 RSLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRV 68 (153)
T ss_pred HHHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcc
Confidence 34444555544443 56789999999999999999987755 4555666666554
No 197
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.45 E-value=0.00099 Score=49.87 Aligned_cols=93 Identities=23% Similarity=0.215 Sum_probs=55.9
Q ss_pred eEEEEccC--CC-chhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHh----CC----cc
Q 021158 26 AVLFIHGF--PE-LWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKL----GI----HQ 94 (316)
Q Consensus 26 ~il~~HG~--~~-~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~----~~----~~ 94 (316)
+|-|+-|. |. ..-.|+.+.+.|+++||.|++.-+.- |.. +.....+..+.....++.+ +. -|
T Consensus 19 vihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~-tfD------H~~~A~~~~~~f~~~~~~L~~~~~~~~~~lP 91 (250)
T PF07082_consen 19 VIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV-TFD------HQAIAREVWERFERCLRALQKRGGLDPAYLP 91 (250)
T ss_pred EEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC-CCc------HHHHHHHHHHHHHHHHHHHHHhcCCCcccCC
Confidence 45555553 22 34568899999999999999987641 110 1111122222222222222 22 26
Q ss_pred eEEEEecHHHHHHHHHHhhchhHHhhhhhcc
Q 021158 95 VFLVGHDWGALIAWYFCLFRPDRVKALVNMS 125 (316)
Q Consensus 95 ~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~ 125 (316)
++-+|||+|+-+-+.+...++..-++-|+++
T Consensus 92 ~~~vGHSlGcklhlLi~s~~~~~r~gniliS 122 (250)
T PF07082_consen 92 VYGVGHSLGCKLHLLIGSLFDVERAGNILIS 122 (250)
T ss_pred eeeeecccchHHHHHHhhhccCcccceEEEe
Confidence 7789999999999888877655446666665
No 198
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.37 E-value=0.00055 Score=47.67 Aligned_cols=39 Identities=18% Similarity=0.205 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHhCCcceEEEEecHHHHHHHHHHhhch
Q 021158 77 LHLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRP 115 (316)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p 115 (316)
+...+.+.++++..+..++++.|||+||.+|..++....
T Consensus 48 ~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l~ 86 (140)
T PF01764_consen 48 DQILDALKELVEKYPDYSIVITGHSLGGALASLAAADLA 86 (140)
T ss_dssp HHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhhh
Confidence 344556666555556568999999999999999888644
No 199
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=97.34 E-value=0.00057 Score=44.86 Aligned_cols=42 Identities=17% Similarity=0.509 Sum_probs=28.4
Q ss_pred CCCceeEEEeCCeeEEEEEeCC----CCeEEEEccCCCchhhhHHh
Q 021158 2 EKIEHTTVATNGINMHVASIGT----GPAVLFIHGFPELWYSWRNQ 43 (316)
Q Consensus 2 ~~~~~~~~~~~g~~l~~~~~g~----~p~il~~HG~~~~~~~~~~~ 43 (316)
++..+..++++|..||+....+ ..+|||+||+++|-..|..+
T Consensus 66 N~~phf~t~I~g~~iHFih~rs~~~~aiPLll~HGWPgSf~Ef~~v 111 (112)
T PF06441_consen 66 NSFPHFKTEIDGLDIHFIHVRSKRPNAIPLLLLHGWPGSFLEFLKV 111 (112)
T ss_dssp TTS-EEEEEETTEEEEEEEE--S-TT-EEEEEE--SS--GGGGHHH
T ss_pred HcCCCeeEEEeeEEEEEEEeeCCCCCCeEEEEECCCCccHHhHHhh
Confidence 5677888999999999876543 35999999999998877665
No 200
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=97.34 E-value=0.00091 Score=51.42 Aligned_cols=105 Identities=18% Similarity=0.140 Sum_probs=59.4
Q ss_pred CCeEEEEccCCC--chhhhHHhhhhhhcCC----ceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHh-----CC
Q 021158 24 GPAVLFIHGFPE--LWYSWRNQLLYLSSRG----YRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKL-----GI 92 (316)
Q Consensus 24 ~p~il~~HG~~~--~~~~~~~~~~~l~~~g----~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 92 (316)
-|.+++.||-.. +...+. +.+.|...| -.++.+|.-.--.-...........+.+++++.=.++.. ..
T Consensus 98 ~pvl~~~DG~~~~~~g~i~~-~~dsli~~g~i~pai~vgid~~d~~~R~~~~~~n~~~~~~L~~eLlP~v~~~yp~~~~a 176 (299)
T COG2382 98 YPVLYLQDGQDWFRSGRIPR-ILDSLIAAGEIPPAILVGIDYIDVKKRREELHCNEAYWRFLAQELLPYVEERYPTSADA 176 (299)
T ss_pred ccEEEEeccHHHHhcCChHH-HHHHHHHcCCCCCceEEecCCCCHHHHHHHhcccHHHHHHHHHHhhhhhhccCcccccC
Confidence 489999998432 222222 223332222 455666543200000000001223444444444444432 22
Q ss_pred cceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCC
Q 021158 93 HQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFP 129 (316)
Q Consensus 93 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 129 (316)
+.-+|.|-|+||.+++..+..+|+.+..++..+|...
T Consensus 177 ~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~ 213 (299)
T COG2382 177 DGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFW 213 (299)
T ss_pred CCcEEeccccccHHHHHHHhcCchhhceeeccCCccc
Confidence 3568999999999999999999999999998887654
No 201
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=97.31 E-value=0.0035 Score=49.46 Aligned_cols=48 Identities=8% Similarity=0.155 Sum_probs=40.2
Q ss_pred cccCcEEEEEeCCCcccCCCCcchhcccccccccccCcccEEEEcCCCcccchh
Q 021158 247 QIKVPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQE 300 (316)
Q Consensus 247 ~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 300 (316)
.+..|..++.+..|.+.++..+.- +-..+|+.|-+..+|+..|.....
T Consensus 327 RLalpKyivnaSgDdff~pDsa~l------Yyd~LPG~kaLrmvPN~~H~~~n~ 374 (507)
T COG4287 327 RLALPKYIVNASGDDFFVPDSANL------YYDDLPGEKALRMVPNDPHNLINQ 374 (507)
T ss_pred hccccceeecccCCcccCCCccce------eeccCCCceeeeeCCCCcchhhHH
Confidence 778999999999999999887765 457889987899999999976543
No 202
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.30 E-value=0.00091 Score=48.34 Aligned_cols=104 Identities=17% Similarity=0.197 Sum_probs=61.8
Q ss_pred CCeEEEEccCCC-chhhhH---------------HhhhhhhcCCceEEccCCC---CCCCCCCCCC-CcchhHHHHHHHH
Q 021158 24 GPAVLFIHGFPE-LWYSWR---------------NQLLYLSSRGYRAIAPDLR---GYGDTDAPPS-VTSYTALHLVGDL 83 (316)
Q Consensus 24 ~p~il~~HG~~~-~~~~~~---------------~~~~~l~~~g~~v~~~D~~---G~G~s~~~~~-~~~~~~~~~~~~~ 83 (316)
...+|++||.|- ....|. +.++.-.+.||.|+..+.- -+-.+...+- .-....+...--.
T Consensus 101 ~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~yvw 180 (297)
T KOG3967|consen 101 QKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKYVW 180 (297)
T ss_pred cceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHHHH
Confidence 458999999874 334453 3344444568999887642 1111111110 0011222222233
Q ss_pred HHHHHHhCCcceEEEEecHHHHHHHHHHhhchh--HHhhhhhccCC
Q 021158 84 IGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPD--RVKALVNMSVP 127 (316)
Q Consensus 84 ~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~--~v~~~il~~~~ 127 (316)
..++.....+.+.++.||.||...+.+..++|+ +|.++.+-+++
T Consensus 181 ~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~ 226 (297)
T KOG3967|consen 181 KNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSA 226 (297)
T ss_pred HHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccc
Confidence 344445566789999999999999999999886 45555555554
No 203
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=97.06 E-value=0.0081 Score=45.25 Aligned_cols=52 Identities=19% Similarity=0.254 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHhCCcceEEEEecHHHHHHHHHHhhch----hHHhhhhhccCCCCC
Q 021158 78 HLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRP----DRVKALVNMSVPFPP 130 (316)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p----~~v~~~il~~~~~~~ 130 (316)
..++-+..+++..+ .++.+.|||.||.+|..++...+ ++|.++...++|...
T Consensus 70 ~A~~yl~~~~~~~~-~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf~ 125 (224)
T PF11187_consen 70 SALAYLKKIAKKYP-GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGFS 125 (224)
T ss_pred HHHHHHHHHHHhCC-CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCCC
Confidence 33444555555554 35999999999999999988743 467788877876654
No 204
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=96.98 E-value=0.0049 Score=44.28 Aligned_cols=56 Identities=23% Similarity=0.166 Sum_probs=43.2
Q ss_pred hHHHHHHHHHHHHHHhC-----CcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCC
Q 021158 75 TALHLVGDLIGLLDKLG-----IHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPP 130 (316)
Q Consensus 75 ~~~~~~~~~~~~~~~~~-----~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~ 130 (316)
..+.-+.+|..+++.+. ..++.++|||+|+.++-..+...+..+..+|+++++...
T Consensus 86 ~A~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~g 146 (177)
T PF06259_consen 86 YARAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGMG 146 (177)
T ss_pred HHHHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCCC
Confidence 45566667777777663 236899999999999998888866689999999887653
No 205
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=96.97 E-value=0.0057 Score=53.34 Aligned_cols=107 Identities=18% Similarity=0.151 Sum_probs=62.6
Q ss_pred CCeEEEEccCCC---chhhh--HHhhhhhhcCCceEEccCCC----CCCCCCCCCCCcchhHHHHHHH---HHHHHHHhC
Q 021158 24 GPAVLFIHGFPE---LWYSW--RNQLLYLSSRGYRAIAPDLR----GYGDTDAPPSVTSYTALHLVGD---LIGLLDKLG 91 (316)
Q Consensus 24 ~p~il~~HG~~~---~~~~~--~~~~~~l~~~g~~v~~~D~~----G~G~s~~~~~~~~~~~~~~~~~---~~~~~~~~~ 91 (316)
-|++|++||.+- +...+ ......+..+..-|+.+.+| |+...........+...|++.. +..-|...|
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~Dq~~AL~wv~~~I~~FG 191 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGLFDQLLALRWVKDNIPSFG 191 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCcccHHHHHHHHHHHHHHHHhcC
Confidence 489999999863 32223 12222334445777888877 3322211111134444444444 444555555
Q ss_pred C--cceEEEEecHHHHHHHHHHhh--chhHHhhhhhccCCCCC
Q 021158 92 I--HQVFLVGHDWGALIAWYFCLF--RPDRVKALVNMSVPFPP 130 (316)
Q Consensus 92 ~--~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~il~~~~~~~ 130 (316)
. ++|.++|||.||..+..+... ....+.++|.+++....
T Consensus 192 Gdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~~~ 234 (545)
T KOG1516|consen 192 GDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNALS 234 (545)
T ss_pred CCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcccccc
Confidence 3 479999999999998777653 22467888888776543
No 206
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=96.96 E-value=0.003 Score=45.82 Aligned_cols=75 Identities=16% Similarity=0.110 Sum_probs=43.5
Q ss_pred ceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHH----HHhCCcceEEEEecHHHHHHHHHHhh------chhHHhhh
Q 021158 52 YRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLL----DKLGIHQVFLVGHDWGALIAWYFCLF------RPDRVKAL 121 (316)
Q Consensus 52 ~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~G~S~Gg~~a~~~a~~------~p~~v~~~ 121 (316)
..+..+++|-..... . -..+...=++++...+ ..-...+++|+|+|+|+.++..++.. ..++|.++
T Consensus 40 ~~~~~V~YpA~~~~~--~--y~~S~~~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~av 115 (179)
T PF01083_consen 40 VAVQGVEYPASLGPN--S--YGDSVAAGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAV 115 (179)
T ss_dssp EEEEE--S---SCGG--S--CHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEE
T ss_pred eEEEecCCCCCCCcc--c--ccccHHHHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEE
Confidence 556667776433221 0 1223333344444444 44455689999999999999999877 34578888
Q ss_pred hhccCCCCC
Q 021158 122 VNMSVPFPP 130 (316)
Q Consensus 122 il~~~~~~~ 130 (316)
++++-+...
T Consensus 116 vlfGdP~~~ 124 (179)
T PF01083_consen 116 VLFGDPRRG 124 (179)
T ss_dssp EEES-TTTB
T ss_pred EEecCCccc
Confidence 888866553
No 207
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.89 E-value=0.0082 Score=41.43 Aligned_cols=80 Identities=11% Similarity=0.074 Sum_probs=53.5
Q ss_pred eEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCcceEEEEecHHHH
Q 021158 26 AVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWGAL 105 (316)
Q Consensus 26 ~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ 105 (316)
.||..-|++..+.....++. .++---++++|+...... +++. ..+.+.++++|||-+
T Consensus 13 LIvyFaGwgtpps~v~HLil--peN~dl~lcYDY~dl~ld--------fDfs-------------Ay~hirlvAwSMGVw 69 (214)
T COG2830 13 LIVYFAGWGTPPSAVNHLIL--PENHDLLLCYDYQDLNLD--------FDFS-------------AYRHIRLVAWSMGVW 69 (214)
T ss_pred EEEEEecCCCCHHHHhhccC--CCCCcEEEEeehhhcCcc--------cchh-------------hhhhhhhhhhhHHHH
Confidence 78888899998887776642 233124678888743211 1111 124577999999999
Q ss_pred HHHHHHhhchhHHhhhhhccCCCCC
Q 021158 106 IAWYFCLFRPDRVKALVNMSVPFPP 130 (316)
Q Consensus 106 ~a~~~a~~~p~~v~~~il~~~~~~~ 130 (316)
+|-++....+ ++..+.+++...+
T Consensus 70 vAeR~lqg~~--lksatAiNGTgLp 92 (214)
T COG2830 70 VAERVLQGIR--LKSATAINGTGLP 92 (214)
T ss_pred HHHHHHhhcc--ccceeeecCCCCC
Confidence 9999888764 6777777765443
No 208
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=96.87 E-value=0.0013 Score=49.86 Aligned_cols=52 Identities=17% Similarity=0.217 Sum_probs=40.7
Q ss_pred HHHHHHHHHH---hCCcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCCC
Q 021158 80 VGDLIGLLDK---LGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPR 131 (316)
Q Consensus 80 ~~~~~~~~~~---~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~ 131 (316)
.+.+.-+++. .+.++..++|||+||.+++.....+|+.+...++++|.....
T Consensus 121 ~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlWw~ 175 (264)
T COG2819 121 TEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLWWH 175 (264)
T ss_pred HHhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchhhhC
Confidence 3344444444 244578999999999999999999999999999999876543
No 209
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.75 E-value=0.0038 Score=45.83 Aligned_cols=70 Identities=11% Similarity=0.013 Sum_probs=46.2
Q ss_pred hhhhhcCCceEEccCCCCCCCCCCC-----C--CCcchhHHHHHHHHHHHHHHhCC-cceEEEEecHHHHHHHHHHhhc
Q 021158 44 LLYLSSRGYRAIAPDLRGYGDTDAP-----P--SVTSYTALHLVGDLIGLLDKLGI-HQVFLVGHDWGALIAWYFCLFR 114 (316)
Q Consensus 44 ~~~l~~~g~~v~~~D~~G~G~s~~~-----~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~G~S~Gg~~a~~~a~~~ 114 (316)
+..+... .+|+++=+|-....... . ........|..+.....+++.+. ++++|+|||.|+.+..++...+
T Consensus 39 as~F~~~-~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 39 ASAFNGV-CNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hhhhhcC-CccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 3455555 68888877632211111 0 11234566777777788888754 5899999999999999998764
No 210
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.66 E-value=0.0026 Score=48.47 Aligned_cols=25 Identities=20% Similarity=0.254 Sum_probs=20.8
Q ss_pred CCcceEEEEecHHHHHHHHHHhhch
Q 021158 91 GIHQVFLVGHDWGALIAWYFCLFRP 115 (316)
Q Consensus 91 ~~~~~~l~G~S~Gg~~a~~~a~~~p 115 (316)
...++++.|||+||.+|..++....
T Consensus 126 p~~~i~vtGHSLGGaiA~l~a~~l~ 150 (229)
T cd00519 126 PDYKIIVTGHSLGGALASLLALDLR 150 (229)
T ss_pred CCceEEEEccCHHHHHHHHHHHHHH
Confidence 4458999999999999998887643
No 211
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.60 E-value=0.0057 Score=42.73 Aligned_cols=114 Identities=14% Similarity=0.174 Sum_probs=64.4
Q ss_pred CeeEEEEEeCC-CCeEEEEccCCCchhhhHH------hhhhhhcCC-ceEEccCCCCCCCCCCCCCCcchhHHHHH----
Q 021158 13 GINMHVASIGT-GPAVLFIHGFPELWYSWRN------QLLYLSSRG-YRAIAPDLRGYGDTDAPPSVTSYTALHLV---- 80 (316)
Q Consensus 13 g~~l~~~~~g~-~p~il~~HG~~~~~~~~~~------~~~~l~~~g-~~v~~~D~~G~G~s~~~~~~~~~~~~~~~---- 80 (316)
+..+.+...|. |.+||+.+-.++.-..|.. +++.+. .| ...++++ |-...+.-. ......+.+
T Consensus 14 ~RdMel~ryGHaG~pVvvFpts~Grf~eyed~G~v~ala~fie-~G~vQlft~~--gldsESf~a--~h~~~adr~~rH~ 88 (227)
T COG4947 14 NRDMELNRYGHAGIPVVVFPTSGGRFNEYEDFGMVDALASFIE-EGLVQLFTLS--GLDSESFLA--THKNAADRAERHR 88 (227)
T ss_pred cchhhhhhccCCCCcEEEEecCCCcchhhhhcccHHHHHHHHh-cCcEEEEEec--ccchHhHhh--hcCCHHHHHHHHH
Confidence 44566666775 5567777766666555543 233333 23 3344443 222111111 011111111
Q ss_pred HHHHHHHHHhCCcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCCCC
Q 021158 81 GDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPR 131 (316)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~ 131 (316)
+--..++++.=.....+-|.||||..|+.+.-++|+.+.++|.+++.+...
T Consensus 89 AyerYv~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYdar 139 (227)
T COG4947 89 AYERYVIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDAR 139 (227)
T ss_pred HHHHHHHHhhcCCCccccccchhhhhhhhhheeChhHhhhheeecceeeHH
Confidence 122233333322356778999999999999999999999999999887643
No 212
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.54 E-value=0.024 Score=45.37 Aligned_cols=65 Identities=14% Similarity=0.128 Sum_probs=47.9
Q ss_pred cCcEEEEEeCCCcccCCCCcchhcccccccccccCcccEEEEcCCCcccchh-hHHHHHHHHHHHHHhC
Q 021158 249 KVPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQE-KAEEVGAHIYEFIKKF 316 (316)
Q Consensus 249 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~~~ 316 (316)
..+.+.+.+..|.++|....+++. +......-++ +.+-+.++-|..+.. .|....+...+|++++
T Consensus 225 ~~~~ly~~s~~d~v~~~~~ie~f~--~~~~~~g~~v-~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~ 290 (350)
T KOG2521|consen 225 PWNQLYLYSDNDDVLPADEIEKFI--ALRREKGVNV-KSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSV 290 (350)
T ss_pred cccceeecCCccccccHHHHHHHH--HHHHhcCceE-EEeeccCccceeeeccCcHHHHHHHHHHHHhc
Confidence 567789999999999998877653 2222333344 566677888987765 8999999999998753
No 213
>PLN02454 triacylglycerol lipase
Probab=96.39 E-value=0.0068 Score=49.45 Aligned_cols=36 Identities=25% Similarity=0.347 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHhCCc--ceEEEEecHHHHHHHHHHhhc
Q 021158 79 LVGDLIGLLDKLGIH--QVFLVGHDWGALIAWYFCLFR 114 (316)
Q Consensus 79 ~~~~~~~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~~ 114 (316)
+...+..+++..... +|++.|||+||.+|+.+|...
T Consensus 212 vl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~di 249 (414)
T PLN02454 212 LLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFDI 249 (414)
T ss_pred HHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHHH
Confidence 344445555544433 389999999999999988653
No 214
>PLN02571 triacylglycerol lipase
Probab=96.39 E-value=0.0062 Score=49.73 Aligned_cols=37 Identities=19% Similarity=0.253 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHhCCc--ceEEEEecHHHHHHHHHHhh
Q 021158 77 LHLVGDLIGLLDKLGIH--QVFLVGHDWGALIAWYFCLF 113 (316)
Q Consensus 77 ~~~~~~~~~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~ 113 (316)
+++.+++..+++..... ++++.|||+||.+|...|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 55667777777765433 68999999999999998875
No 215
>PLN00413 triacylglycerol lipase
Probab=96.24 E-value=0.0096 Score=49.26 Aligned_cols=37 Identities=22% Similarity=0.369 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHhCCcceEEEEecHHHHHHHHHHh
Q 021158 76 ALHLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCL 112 (316)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 112 (316)
..++.+.+.++++.....++++.|||+||.+|..+|.
T Consensus 267 yy~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 267 YYTILRHLKEIFDQNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHH
Confidence 3456667777777777678999999999999998875
No 216
>PLN02162 triacylglycerol lipase
Probab=96.19 E-value=0.01 Score=49.03 Aligned_cols=37 Identities=22% Similarity=0.178 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHHhCCcceEEEEecHHHHHHHHHHh
Q 021158 76 ALHLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCL 112 (316)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 112 (316)
..++.+.+.+++......++++.|||+||.+|..+|.
T Consensus 261 y~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 261 YYTIRQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 3445556666666656568999999999999998765
No 217
>PLN02408 phospholipase A1
Probab=96.16 E-value=0.0097 Score=47.86 Aligned_cols=38 Identities=21% Similarity=0.255 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHhCCc--ceEEEEecHHHHHHHHHHhhch
Q 021158 78 HLVGDLIGLLDKLGIH--QVFLVGHDWGALIAWYFCLFRP 115 (316)
Q Consensus 78 ~~~~~~~~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~~p 115 (316)
++.+.+..+++..+.. ++++.|||+||.+|..+|....
T Consensus 183 qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl~ 222 (365)
T PLN02408 183 MVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDIK 222 (365)
T ss_pred HHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHHH
Confidence 3455666666665533 5899999999999999887643
No 218
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=96.12 E-value=0.0044 Score=49.93 Aligned_cols=104 Identities=20% Similarity=0.280 Sum_probs=79.1
Q ss_pred CCeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCC-CCcchhHHHHHHHHHHHHHHhC---CcceEEEE
Q 021158 24 GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPP-SVTSYTALHLVGDLIGLLDKLG---IHQVFLVG 99 (316)
Q Consensus 24 ~p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~G 99 (316)
.|+|+..-|++.+..-...-...|.+ -+-+.+.+|-+|.|.+.+ +-...++.+.+.|.+.+++.+. -.+.+--|
T Consensus 63 rPtV~~T~GY~~~~~p~r~Ept~Lld--~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~~kWISTG 140 (448)
T PF05576_consen 63 RPTVLYTEGYNVSTSPRRSEPTQLLD--GNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYPGKWISTG 140 (448)
T ss_pred CCeEEEecCcccccCccccchhHhhc--cceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhccCCceecC
Confidence 58888888887654333222223333 477999999999998765 3345689999999999998873 24788899
Q ss_pred ecHHHHHHHHHHhhchhHHhhhhhccCCCC
Q 021158 100 HDWGALIAWYFCLFRPDRVKALVNMSVPFP 129 (316)
Q Consensus 100 ~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 129 (316)
.|=||+.++.+=..+|+.|.+.|.--.+..
T Consensus 141 ~SKGGmTa~y~rrFyP~DVD~tVaYVAP~~ 170 (448)
T PF05576_consen 141 GSKGGMTAVYYRRFYPDDVDGTVAYVAPND 170 (448)
T ss_pred cCCCceeEEEEeeeCCCCCCeeeeeecccc
Confidence 999999999999999999999987766654
No 219
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=95.97 E-value=0.0075 Score=48.51 Aligned_cols=86 Identities=19% Similarity=0.275 Sum_probs=49.3
Q ss_pred CeEEEEccCCC-chhhhHHhhhhhhcCCceEEccCCCCC-CCCCCCCCCcchhHHHHHHHHHHHHHHhCCcceEEEEecH
Q 021158 25 PAVLFIHGFPE-LWYSWRNQLLYLSSRGYRAIAPDLRGY-GDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDW 102 (316)
Q Consensus 25 p~il~~HG~~~-~~~~~~~~~~~l~~~g~~v~~~D~~G~-G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 102 (316)
-.+|++||+-+ +...|...+...... +.=..+..+|+ +......+.-..=-...++++.+.+....++++-.+|||+
T Consensus 81 HLvVlthGi~~~~~~~~~~~~~~~~kk-~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~si~kISfvghSL 159 (405)
T KOG4372|consen 81 HLVVLTHGLHGADMEYWKEKIEQMTKK-MPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDYSIEKISFVGHSL 159 (405)
T ss_pred eEEEeccccccccHHHHHHHHHhhhcC-CCcceEeeeccccchhhccccceeeecccHHHHhhhhhccccceeeeeeeec
Confidence 47999999977 566777766655544 22112222322 2222222111222233445555555555578999999999
Q ss_pred HHHHHHHHH
Q 021158 103 GALIAWYFC 111 (316)
Q Consensus 103 Gg~~a~~~a 111 (316)
||.++..+.
T Consensus 160 GGLvar~AI 168 (405)
T KOG4372|consen 160 GGLVARYAI 168 (405)
T ss_pred CCeeeeEEE
Confidence 998876544
No 220
>PLN02934 triacylglycerol lipase
Probab=95.84 E-value=0.016 Score=48.42 Aligned_cols=38 Identities=21% Similarity=0.274 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHhCCcceEEEEecHHHHHHHHHHhh
Q 021158 76 ALHLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLF 113 (316)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 113 (316)
...+...+..+++.....++++.|||+||.+|..++..
T Consensus 304 y~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~~ 341 (515)
T PLN02934 304 YYAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPTV 341 (515)
T ss_pred HHHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHHH
Confidence 34466667777777666789999999999999988753
No 221
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=95.73 E-value=0.028 Score=32.57 Aligned_cols=35 Identities=23% Similarity=0.423 Sum_probs=19.8
Q ss_pred eEEEeCCeeEEEEEeC----------CCCeEEEEccCCCchhhhH
Q 021158 7 TTVATNGINMHVASIG----------TGPAVLFIHGFPELWYSWR 41 (316)
Q Consensus 7 ~~~~~~g~~l~~~~~g----------~~p~il~~HG~~~~~~~~~ 41 (316)
.+.+-||.-|...... .+|+|++.||+.+++..|-
T Consensus 16 ~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~wv 60 (63)
T PF04083_consen 16 EVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDWV 60 (63)
T ss_dssp EEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGGC
T ss_pred EEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHHH
Confidence 3444589888765431 2589999999999999883
No 222
>PLN02324 triacylglycerol lipase
Probab=95.72 E-value=0.019 Score=46.89 Aligned_cols=36 Identities=22% Similarity=0.336 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHhCCc--ceEEEEecHHHHHHHHHHhh
Q 021158 78 HLVGDLIGLLDKLGIH--QVFLVGHDWGALIAWYFCLF 113 (316)
Q Consensus 78 ~~~~~~~~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~ 113 (316)
++.+.+..+++..... +|++.|||+||.+|...|..
T Consensus 198 qVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 198 QVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 4455666677665432 68999999999999998865
No 223
>PLN02310 triacylglycerol lipase
Probab=95.56 E-value=0.023 Score=46.43 Aligned_cols=37 Identities=14% Similarity=0.174 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHhC----CcceEEEEecHHHHHHHHHHhh
Q 021158 77 LHLVGDLIGLLDKLG----IHQVFLVGHDWGALIAWYFCLF 113 (316)
Q Consensus 77 ~~~~~~~~~~~~~~~----~~~~~l~G~S~Gg~~a~~~a~~ 113 (316)
+++.+.+..+++... ..++.+.|||+||.+|+.+|..
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 445566667666552 1368999999999999988854
No 224
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=95.51 E-value=0.022 Score=45.66 Aligned_cols=40 Identities=40% Similarity=0.639 Sum_probs=32.1
Q ss_pred CCcceEEEEecHHHHHHHHHHhhchhH-----HhhhhhccCCCCC
Q 021158 91 GIHQVFLVGHDWGALIAWYFCLFRPDR-----VKALVNMSVPFPP 130 (316)
Q Consensus 91 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~-----v~~~il~~~~~~~ 130 (316)
|.+|+.|+|||+|+.+...+...-.++ |..++++++|...
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~ 262 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPS 262 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCC
Confidence 667999999999999998887765543 7788888876654
No 225
>PLN02802 triacylglycerol lipase
Probab=95.45 E-value=0.027 Score=47.16 Aligned_cols=37 Identities=24% Similarity=0.326 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHhCC--cceEEEEecHHHHHHHHHHhhc
Q 021158 78 HLVGDLIGLLDKLGI--HQVFLVGHDWGALIAWYFCLFR 114 (316)
Q Consensus 78 ~~~~~~~~~~~~~~~--~~~~l~G~S~Gg~~a~~~a~~~ 114 (316)
++.+++..+++.... .+|++.|||+||.+|..+|...
T Consensus 313 qVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 313 SVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADEL 351 (509)
T ss_pred HHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHH
Confidence 445566666665532 2689999999999999888754
No 226
>PLN02753 triacylglycerol lipase
Probab=95.35 E-value=0.03 Score=47.05 Aligned_cols=37 Identities=16% Similarity=0.270 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHhCC-----cceEEEEecHHHHHHHHHHhh
Q 021158 77 LHLVGDLIGLLDKLGI-----HQVFLVGHDWGALIAWYFCLF 113 (316)
Q Consensus 77 ~~~~~~~~~~~~~~~~-----~~~~l~G~S~Gg~~a~~~a~~ 113 (316)
+++.+.+..+++..+. -+|.+.|||+||.+|...|..
T Consensus 291 eQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 291 EQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 4455566666665532 379999999999999998864
No 227
>PLN03037 lipase class 3 family protein; Provisional
Probab=95.18 E-value=0.034 Score=46.67 Aligned_cols=37 Identities=14% Similarity=0.202 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHhC----CcceEEEEecHHHHHHHHHHhh
Q 021158 77 LHLVGDLIGLLDKLG----IHQVFLVGHDWGALIAWYFCLF 113 (316)
Q Consensus 77 ~~~~~~~~~~~~~~~----~~~~~l~G~S~Gg~~a~~~a~~ 113 (316)
++..+++..+++... ..++.+.|||+||.+|+..|..
T Consensus 298 eQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 298 EQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 345566777776553 1268999999999999988864
No 228
>PLN02719 triacylglycerol lipase
Probab=95.17 E-value=0.037 Score=46.41 Aligned_cols=38 Identities=16% Similarity=0.260 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHhCC-----cceEEEEecHHHHHHHHHHhhc
Q 021158 77 LHLVGDLIGLLDKLGI-----HQVFLVGHDWGALIAWYFCLFR 114 (316)
Q Consensus 77 ~~~~~~~~~~~~~~~~-----~~~~l~G~S~Gg~~a~~~a~~~ 114 (316)
+++.+.+..+++.... .+|.+.|||+||.+|..+|...
T Consensus 277 eQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl 319 (518)
T PLN02719 277 EQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDV 319 (518)
T ss_pred HHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHH
Confidence 3455566666665432 2799999999999999988643
No 229
>PLN02761 lipase class 3 family protein
Probab=95.09 E-value=0.039 Score=46.37 Aligned_cols=37 Identities=19% Similarity=0.284 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHhC-----C-cceEEEEecHHHHHHHHHHhh
Q 021158 77 LHLVGDLIGLLDKLG-----I-HQVFLVGHDWGALIAWYFCLF 113 (316)
Q Consensus 77 ~~~~~~~~~~~~~~~-----~-~~~~l~G~S~Gg~~a~~~a~~ 113 (316)
+++.+.+..+++..+ . -+|.+.|||+||.+|...|..
T Consensus 272 ~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 272 EQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred HHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHH
Confidence 345566666666552 1 269999999999999988864
No 230
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=94.72 E-value=0.03 Score=40.39 Aligned_cols=65 Identities=20% Similarity=0.228 Sum_probs=48.3
Q ss_pred cCcEEEEEeCCCcccCCCCcchhcccccccccccCc-ccEEEEcCCCcccchh---hHHHHHHHHHHHHHhC
Q 021158 249 KVPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYVPYL-QDVVVMEGVAHFINQE---KAEEVGAHIYEFIKKF 316 (316)
Q Consensus 249 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~---~~~~~~~~i~~fl~~~ 316 (316)
++++|-|-|+.|.++.+...... ..+-..+|.. |..++.+|+||+.... -.+++.-.|.+||.++
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA---~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAA---HDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQH 202 (202)
T ss_pred cceeEEeecCcccCCcchHHHHH---HHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHhC
Confidence 56778899999999998866542 2244445543 4677788999987665 3478899999999875
No 231
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=94.41 E-value=0.22 Score=37.66 Aligned_cols=80 Identities=19% Similarity=0.130 Sum_probs=45.9
Q ss_pred CceEEccCCCCC-CC-CCCCCCCcchhHHHHHHHHHHHHHHh--CCcceEEEEecHHHHHHHHHHhhchh------HHhh
Q 021158 51 GYRAIAPDLRGY-GD-TDAPPSVTSYTALHLVGDLIGLLDKL--GIHQVFLVGHDWGALIAWYFCLFRPD------RVKA 120 (316)
Q Consensus 51 g~~v~~~D~~G~-G~-s~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~------~v~~ 120 (316)
|+.+..+++|.. +- +.........+..+=++.+.+.++.. ..++++++|+|+|+.++...+.+.-+ ..-.
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~ 81 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLS 81 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceE
Confidence 466777777751 11 00000012345566666666666652 23689999999999999988776422 1223
Q ss_pred hhhccCCCCC
Q 021158 121 LVNMSVPFPP 130 (316)
Q Consensus 121 ~il~~~~~~~ 130 (316)
.|+++-+..+
T Consensus 82 fVl~gnP~rp 91 (225)
T PF08237_consen 82 FVLIGNPRRP 91 (225)
T ss_pred EEEecCCCCC
Confidence 5555544443
No 232
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=94.38 E-value=0.076 Score=42.99 Aligned_cols=37 Identities=22% Similarity=0.261 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHhCCcceEEEEecHHHHHHHHHHhh
Q 021158 77 LHLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLF 113 (316)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 113 (316)
..+.+++..+++....-++.+-|||+||.+|..+|..
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 5677788888888886789999999999999988875
No 233
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=94.12 E-value=0.19 Score=46.67 Aligned_cols=95 Identities=17% Similarity=0.169 Sum_probs=65.9
Q ss_pred CCCeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhC-CcceEEEEec
Q 021158 23 TGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLG-IHQVFLVGHD 101 (316)
Q Consensus 23 ~~p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~G~S 101 (316)
++|++.|+|.+-+....+..++..|. + |.+|.-.... ....+++..++.....++.+. ..|..++|.|
T Consensus 2122 e~~~~Ffv~pIEG~tt~l~~la~rle---~-------PaYglQ~T~~-vP~dSies~A~~yirqirkvQP~GPYrl~GYS 2190 (2376)
T KOG1202|consen 2122 EEPPLFFVHPIEGFTTALESLASRLE---I-------PAYGLQCTEA-VPLDSIESLAAYYIRQIRKVQPEGPYRLAGYS 2190 (2376)
T ss_pred cCCceEEEeccccchHHHHHHHhhcC---C-------cchhhhcccc-CCcchHHHHHHHHHHHHHhcCCCCCeeeeccc
Confidence 47999999999888777777776553 2 2233221111 124478888887777777764 4589999999
Q ss_pred HHHHHHHHHHhhchh--HHhhhhhccCCC
Q 021158 102 WGALIAWYFCLFRPD--RVKALVNMSVPF 128 (316)
Q Consensus 102 ~Gg~~a~~~a~~~p~--~v~~~il~~~~~ 128 (316)
+|+.++..+|....+ ....+|++++.+
T Consensus 2191 yG~~l~f~ma~~Lqe~~~~~~lillDGsp 2219 (2376)
T KOG1202|consen 2191 YGACLAFEMASQLQEQQSPAPLILLDGSP 2219 (2376)
T ss_pred hhHHHHHHHHHHHHhhcCCCcEEEecCch
Confidence 999999999876433 345578887654
No 234
>PLN02847 triacylglycerol lipase
Probab=94.12 E-value=0.1 Score=44.73 Aligned_cols=23 Identities=22% Similarity=0.260 Sum_probs=19.0
Q ss_pred CCcceEEEEecHHHHHHHHHHhh
Q 021158 91 GIHQVFLVGHDWGALIAWYFCLF 113 (316)
Q Consensus 91 ~~~~~~l~G~S~Gg~~a~~~a~~ 113 (316)
..-+++++|||+||.+|..++..
T Consensus 249 PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 249 PDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CCCeEEEeccChHHHHHHHHHHH
Confidence 33479999999999999888764
No 235
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=93.68 E-value=0.44 Score=40.68 Aligned_cols=67 Identities=10% Similarity=0.124 Sum_probs=49.4
Q ss_pred cccCcEEEEEeCCCcccCCCCcchhccccccccccc-------CcccEEEEcCCCcccchh--hHHHHHHHHHHHHHh
Q 021158 247 QIKVPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYVP-------YLQDVVVMEGVAHFINQE--KAEEVGAHIYEFIKK 315 (316)
Q Consensus 247 ~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~gH~~~~~--~~~~~~~~i~~fl~~ 315 (316)
+---.+++.||..|.++|+..+..+++ ++.+..+ +..++..+||.+|+.--. .+-+....|.+|.++
T Consensus 351 ~~GGKLI~~HG~aD~~I~p~~ti~YY~--~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~ 426 (474)
T PF07519_consen 351 ARGGKLILYHGWADPLIPPQGTIDYYE--RVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVEN 426 (474)
T ss_pred hcCCeEEEEecCCCCccCCCcHHHHHH--HHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhC
Confidence 335789999999999999999998884 3333332 223888999999976443 445677888888764
No 236
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=92.53 E-value=0.88 Score=35.89 Aligned_cols=89 Identities=19% Similarity=0.231 Sum_probs=61.0
Q ss_pred CCeEEEEccCCCchhh----hHHhhh-----------hhhcCCceEEccCCC-CCCCCCCCCC-CcchhHHHHHHHHHHH
Q 021158 24 GPAVLFIHGFPELWYS----WRNQLL-----------YLSSRGYRAIAPDLR-GYGDTDAPPS-VTSYTALHLVGDLIGL 86 (316)
Q Consensus 24 ~p~il~~HG~~~~~~~----~~~~~~-----------~l~~~g~~v~~~D~~-G~G~s~~~~~-~~~~~~~~~~~~~~~~ 86 (316)
.|..+++.|.++.+.. |+.+-+ .|.. -.++.+|-| |.|.|..... .-.-+..+.+.|+.++
T Consensus 31 ~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~--adllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~~l 108 (414)
T KOG1283|consen 31 RPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKD--ADLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDLVEL 108 (414)
T ss_pred CCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhh--ccEEEecCCCcCceeeecCcccccccHHHHHHHHHHH
Confidence 6889999998764432 333221 1222 467778877 8887754432 1233567888999999
Q ss_pred HHHh-------CCcceEEEEecHHHHHHHHHHhhc
Q 021158 87 LDKL-------GIHQVFLVGHDWGALIAWYFCLFR 114 (316)
Q Consensus 87 ~~~~-------~~~~~~l~G~S~Gg~~a~~~a~~~ 114 (316)
++.+ ...|++++..|.||-+|..++...
T Consensus 109 lk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l 143 (414)
T KOG1283|consen 109 LKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALEL 143 (414)
T ss_pred HHHHHhcCccccccceEEEEhhcccchhhhhhhhH
Confidence 9875 345899999999999999887654
No 237
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=90.07 E-value=11 Score=32.08 Aligned_cols=101 Identities=21% Similarity=0.240 Sum_probs=62.5
Q ss_pred EEeCCeeEE-EEEeCC--CCeEEEEccCCCchhhhH--HhhhhhhcCCce-EEccCCCCCCCCCCCCCCcchhHHHHHHH
Q 021158 9 VATNGINMH-VASIGT--GPAVLFIHGFPELWYSWR--NQLLYLSSRGYR-AIAPDLRGYGDTDAPPSVTSYTALHLVGD 82 (316)
Q Consensus 9 ~~~~g~~l~-~~~~g~--~p~il~~HG~~~~~~~~~--~~~~~l~~~g~~-v~~~D~~G~G~s~~~~~~~~~~~~~~~~~ 82 (316)
++-.+..+. |...|+ .|..|..-|+-. .+-|+ .+.+.| |.. .+.-|.|=-|.+--..+ ..+ -+.+.+-
T Consensus 271 ~D~~reEi~yYFnPGD~KPPL~VYFSGyR~-aEGFEgy~MMk~L---g~PfLL~~DpRleGGaFYlGs-~ey-E~~I~~~ 344 (511)
T TIGR03712 271 VDSKRQEFIYYFNPGDFKPPLNVYFSGYRP-AEGFEGYFMMKRL---GAPFLLIGDPRLEGGAFYLGS-DEY-EQGIINV 344 (511)
T ss_pred ecCCCCeeEEecCCcCCCCCeEEeeccCcc-cCcchhHHHHHhc---CCCeEEeeccccccceeeeCc-HHH-HHHHHHH
Confidence 333444544 444555 456788888754 34343 334444 333 34447776665533221 122 4456667
Q ss_pred HHHHHHHhCCc--ceEEEEecHHHHHHHHHHhhch
Q 021158 83 LIGLLDKLGIH--QVFLVGHDWGALIAWYFCLFRP 115 (316)
Q Consensus 83 ~~~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~~p 115 (316)
|.+.++.+|.+ .++|-|-|||..-|+.++++..
T Consensus 345 I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~ 379 (511)
T TIGR03712 345 IQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKLS 379 (511)
T ss_pred HHHHHHHhCCCHHHeeeccccccchhhhhhcccCC
Confidence 77788888775 6999999999999999999753
No 238
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=89.42 E-value=0.6 Score=36.06 Aligned_cols=25 Identities=24% Similarity=0.297 Sum_probs=21.1
Q ss_pred CCcceEEEEecHHHHHHHHHHhhch
Q 021158 91 GIHQVFLVGHDWGALIAWYFCLFRP 115 (316)
Q Consensus 91 ~~~~~~l~G~S~Gg~~a~~~a~~~p 115 (316)
...++.+-|||+||.+|..+..++.
T Consensus 274 pda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 274 PDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred CCceEEEeccccchHHHHHhccccC
Confidence 4458999999999999998887764
No 239
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=89.42 E-value=0.6 Score=36.06 Aligned_cols=25 Identities=24% Similarity=0.297 Sum_probs=21.1
Q ss_pred CCcceEEEEecHHHHHHHHHHhhch
Q 021158 91 GIHQVFLVGHDWGALIAWYFCLFRP 115 (316)
Q Consensus 91 ~~~~~~l~G~S~Gg~~a~~~a~~~p 115 (316)
...++.+-|||+||.+|..+..++.
T Consensus 274 pda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 274 PDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred CCceEEEeccccchHHHHHhccccC
Confidence 4458999999999999998887764
No 240
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=89.23 E-value=4.1 Score=33.71 Aligned_cols=99 Identities=14% Similarity=0.087 Sum_probs=66.1
Q ss_pred CeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCC---------------------CcchhHHHHHHHH
Q 021158 25 PAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPS---------------------VTSYTALHLVGDL 83 (316)
Q Consensus 25 p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~---------------------~~~~~~~~~~~~~ 83 (316)
|+|+++--+-.-...+.++.+.+.+.|..++.+|.-=.|.+....+ ......+.+.+.+
T Consensus 2 ~tI~iigT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga 81 (403)
T PF06792_consen 2 KTIAIIGTLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGA 81 (403)
T ss_pred CEEEEEEccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHH
Confidence 4566665555666778889999999999999999754443333211 0112344445555
Q ss_pred HHHHHHhC----CcceEEEEecHHHHHHHHHHhhchhHHhhhhh
Q 021158 84 IGLLDKLG----IHQVFLVGHDWGALIAWYFCLFRPDRVKALVN 123 (316)
Q Consensus 84 ~~~~~~~~----~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il 123 (316)
..++..+. ++-++-+|-|.|..++.......|--+-+++.
T Consensus 82 ~~~v~~l~~~g~i~Gvi~~GGs~GT~lat~aMr~LPiG~PKlmV 125 (403)
T PF06792_consen 82 ARFVSDLYDEGKIDGVIGIGGSGGTALATAAMRALPIGFPKLMV 125 (403)
T ss_pred HHHHHHHHhcCCccEEEEecCCccHHHHHHHHHhCCCCCCeEEE
Confidence 55555552 34678899999999999999887765555553
No 241
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=89.20 E-value=1.1 Score=28.93 Aligned_cols=83 Identities=19% Similarity=0.145 Sum_probs=55.3
Q ss_pred hhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCcceEEEEecHHH--HHHHHHHhhchh
Q 021158 39 SWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWGA--LIAWYFCLFRPD 116 (316)
Q Consensus 39 ~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg--~~a~~~a~~~p~ 116 (316)
.|..+.+.+..+||..=.+.++..|.+....- .....+.=...+..+++.....+++++|=|--. -+-..+|.++|+
T Consensus 12 ly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~-~~~~~~~K~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~P~ 90 (100)
T PF09949_consen 12 LYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLF-KSGAEEHKRDNIERILRDFPERKFILIGDSGQHDPEIYAEIARRFPG 90 (100)
T ss_pred HHHHHHHHHHhcCCCCCceEcccCCccccccc-cCCchhHHHHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHCCC
Confidence 34556667777788877777877765533210 001113455678888888888899999988655 344567788998
Q ss_pred HHhhhh
Q 021158 117 RVKALV 122 (316)
Q Consensus 117 ~v~~~i 122 (316)
+|.++.
T Consensus 91 ~i~ai~ 96 (100)
T PF09949_consen 91 RILAIY 96 (100)
T ss_pred CEEEEE
Confidence 887653
No 242
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=88.33 E-value=0.44 Score=40.71 Aligned_cols=113 Identities=12% Similarity=0.062 Sum_probs=66.2
Q ss_pred eEEEEEeCC---CCeEEEEccCCCchhh-hHH----hhhhhhcCCceEEccCCCCCCCCCC----CCCCcch--------
Q 021158 15 NMHVASIGT---GPAVLFIHGFPELWYS-WRN----QLLYLSSRGYRAIAPDLRGYGDTDA----PPSVTSY-------- 74 (316)
Q Consensus 15 ~l~~~~~g~---~p~il~~HG~~~~~~~-~~~----~~~~l~~~g~~v~~~D~~G~G~s~~----~~~~~~~-------- 74 (316)
.|.+..+=+ +--++.+-|.|..... +.. +...+ .+||.+++=|- ||..+.. .......
T Consensus 16 ~i~fev~LP~~WNgR~~~~GgGG~~G~i~~~~~~~~~~~~~-~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~r 93 (474)
T PF07519_consen 16 NIRFEVWLPDNWNGRFLQVGGGGFAGGINYADGKASMATAL-ARGYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYR 93 (474)
T ss_pred eEEEEEECChhhccCeEEECCCeeeCcccccccccccchhh-hcCeEEEEecC-CCCCCcccccccccCCHHHHHHHHhh
Confidence 566665543 2245555444433222 211 23334 45899999884 5554432 1111111
Q ss_pred hHHHHHHHHHHHHHHh---CCcceEEEEecHHHHHHHHHHhhchhHHhhhhhccCCCC
Q 021158 75 TALHLVGDLIGLLDKL---GIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFP 129 (316)
Q Consensus 75 ~~~~~~~~~~~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 129 (316)
...+.+.--+++++.. ..+.-+..|.|-||.-++..|.++|+.+.|+|.-+|+..
T Consensus 94 a~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~~ 151 (474)
T PF07519_consen 94 ALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAIN 151 (474)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCchHH
Confidence 1222233333444443 334578999999999999999999999999998888764
No 243
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=87.90 E-value=1.2 Score=38.39 Aligned_cols=33 Identities=27% Similarity=0.465 Sum_probs=21.5
Q ss_pred HHHHHHHHHHh--C-CcceEEEEecHHHHHHHHHHh
Q 021158 80 VGDLIGLLDKL--G-IHQVFLVGHDWGALIAWYFCL 112 (316)
Q Consensus 80 ~~~~~~~~~~~--~-~~~~~l~G~S~Gg~~a~~~a~ 112 (316)
...+.+.+.+. | .++++.+||||||.++=.+..
T Consensus 510 s~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLl 545 (697)
T KOG2029|consen 510 SNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLL 545 (697)
T ss_pred HHHHHHHHHHhccCCCCceEEEecccchHHHHHHHH
Confidence 33444444444 3 357889999999988765543
No 244
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=87.25 E-value=1.8 Score=35.67 Aligned_cols=58 Identities=14% Similarity=0.043 Sum_probs=39.4
Q ss_pred cccCcEEEEEeCCCcccCCCCcchhcccccccccccCcccEEEEcCCCcccch-----hhHHHHHHHHHHHH
Q 021158 247 QIKVPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQ-----EKAEEVGAHIYEFI 313 (316)
Q Consensus 247 ~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-----~~~~~~~~~i~~fl 313 (316)
+-.-.+|+|+|++|++...... +.+...++ .+.+.||++|...+ ++.++....|.+|.
T Consensus 349 ~~~~rmlFVYG~nDPW~A~~f~--------l~~g~~ds-~v~~~PggnHga~I~~L~~~~r~~a~a~l~~Wa 411 (448)
T PF05576_consen 349 NNGPRMLFVYGENDPWSAEPFR--------LGKGKRDS-YVFTAPGGNHGARIAGLPEAERAEATARLRRWA 411 (448)
T ss_pred hCCCeEEEEeCCCCCcccCccc--------cCCCCcce-EEEEcCCCcccccccCCCHHHHHHHHHHHHHHc
Confidence 4456799999999999764422 22334466 77888999996543 34566677777774
No 245
>PRK02399 hypothetical protein; Provisional
Probab=86.85 E-value=8.8 Score=31.87 Aligned_cols=98 Identities=13% Similarity=0.119 Sum_probs=62.2
Q ss_pred CeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCC---------------------CcchhHHHHHHHH
Q 021158 25 PAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPS---------------------VTSYTALHLVGDL 83 (316)
Q Consensus 25 p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~---------------------~~~~~~~~~~~~~ 83 (316)
+.|+++--+-.-.+.+..+.+.+.++|..|+.+|.-..|......+ ......+.+.+-.
T Consensus 4 ~~I~iigT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga 83 (406)
T PRK02399 4 KRIYIAGTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGA 83 (406)
T ss_pred CEEEEEeccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHH
Confidence 4555555455555678888888888899999999844432211110 0111234444555
Q ss_pred HHHHHHh----CCcceEEEEecHHHHHHHHHHhhchhHHhhhh
Q 021158 84 IGLLDKL----GIHQVFLVGHDWGALIAWYFCLFRPDRVKALV 122 (316)
Q Consensus 84 ~~~~~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i 122 (316)
..+++.+ .++-++-+|-|.|..++...+...|--+-+++
T Consensus 84 ~~~v~~L~~~g~i~gviglGGs~GT~lat~aMr~LPiG~PKlm 126 (406)
T PRK02399 84 AAFVRELYERGDVAGVIGLGGSGGTALATPAMRALPIGVPKLM 126 (406)
T ss_pred HHHHHHHHhcCCccEEEEecCcchHHHHHHHHHhCCCCCCeEE
Confidence 5555543 34568889999999999999988875555554
No 246
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=86.13 E-value=1.2 Score=38.25 Aligned_cols=82 Identities=17% Similarity=0.122 Sum_probs=44.8
Q ss_pred eEEEEccCCC---chhhhHHhhhhhh-cCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHH---HHhCC--cceE
Q 021158 26 AVLFIHGFPE---LWYSWRNQLLYLS-SRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLL---DKLGI--HQVF 96 (316)
Q Consensus 26 ~il~~HG~~~---~~~~~~~~~~~l~-~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~---~~~~~--~~~~ 96 (316)
.|+-+||.|. ++..-+...+.++ +.|..|+.+|+.=-...+.+. ..++..=...-++ ..+|. ++|+
T Consensus 398 li~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSLAPEaPFPR-----aleEv~fAYcW~inn~allG~TgEriv 472 (880)
T KOG4388|consen 398 LIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSLAPEAPFPR-----ALEEVFFAYCWAINNCALLGSTGERIV 472 (880)
T ss_pred EEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeeccCCCCCCCc-----HHHHHHHHHHHHhcCHHHhCcccceEE
Confidence 6888999873 3333333333222 237999999975333332222 2222222222222 23343 5899
Q ss_pred EEEecHHHHHHHHHHh
Q 021158 97 LVGHDWGALIAWYFCL 112 (316)
Q Consensus 97 l~G~S~Gg~~a~~~a~ 112 (316)
++|-|.||.+....+.
T Consensus 473 ~aGDSAGgNL~~~VaL 488 (880)
T KOG4388|consen 473 LAGDSAGGNLCFTVAL 488 (880)
T ss_pred EeccCCCcceeehhHH
Confidence 9999999976655544
No 247
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=85.92 E-value=2.9 Score=31.22 Aligned_cols=58 Identities=19% Similarity=0.233 Sum_probs=42.3
Q ss_pred hhcCCc-eEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCcceEEEEecH----HHHHHHHHHhhc
Q 021158 47 LSSRGY-RAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDW----GALIAWYFCLFR 114 (316)
Q Consensus 47 l~~~g~-~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~----Gg~~a~~~a~~~ 114 (316)
+...|. +|+..|.++. ..++.+.+++.+.++++..+ ..++|+|+|. |..++.++|++.
T Consensus 72 l~~~G~d~V~~~~~~~~---------~~~~~e~~a~al~~~i~~~~-p~lVL~~~t~~~~~grdlaprlAarL 134 (202)
T cd01714 72 ALAMGADRAILVSDRAF---------AGADTLATAKALAAAIKKIG-VDLILTGKQSIDGDTGQVGPLLAELL 134 (202)
T ss_pred HHHcCCCEEEEEecccc---------cCCChHHHHHHHHHHHHHhC-CCEEEEcCCcccCCcCcHHHHHHHHh
Confidence 334454 5666654432 35678889999999988877 5789999998 888998888874
No 248
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=85.47 E-value=1.9 Score=31.04 Aligned_cols=38 Identities=24% Similarity=0.198 Sum_probs=30.5
Q ss_pred CCCCeEEEEccCCCchhhh--HHhhhhhhcCCceEEccCC
Q 021158 22 GTGPAVLFIHGFPELWYSW--RNQLLYLSSRGYRAIAPDL 59 (316)
Q Consensus 22 g~~p~il~~HG~~~~~~~~--~~~~~~l~~~g~~v~~~D~ 59 (316)
+..|.+|++-|+.++..+- ..+.+.|.++|++++..|=
T Consensus 20 ~~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDG 59 (197)
T COG0529 20 GQKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDG 59 (197)
T ss_pred CCCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecC
Confidence 3468999999998876653 4566788899999999983
No 249
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=85.12 E-value=1.7 Score=36.71 Aligned_cols=43 Identities=23% Similarity=0.352 Sum_probs=32.5
Q ss_pred HhCCcceEEEEecHHHHHHHHHHhhc-----hhHHhhhhhccCCCCCC
Q 021158 89 KLGIHQVFLVGHDWGALIAWYFCLFR-----PDRVKALVNMSVPFPPR 131 (316)
Q Consensus 89 ~~~~~~~~l~G~S~Gg~~a~~~a~~~-----p~~v~~~il~~~~~~~~ 131 (316)
.+|.+||.|+|+|+|+.+...+...- -+.|..+|++++|....
T Consensus 443 ~qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k 490 (633)
T KOG2385|consen 443 SQGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTK 490 (633)
T ss_pred ccCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCC
Confidence 34888999999999999988666532 22578888888877653
No 250
>PRK10279 hypothetical protein; Provisional
Probab=84.82 E-value=2.4 Score=33.89 Aligned_cols=39 Identities=23% Similarity=0.352 Sum_probs=29.6
Q ss_pred HHHHHHHhCCcceEEEEecHHHHHHHHHHhhchhHHhhh
Q 021158 83 LIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKAL 121 (316)
Q Consensus 83 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~ 121 (316)
+.+.+++.++..-.+.|.|+|+.++..+|......+..+
T Consensus 23 VL~aL~E~gi~~d~i~GtS~GAlvga~yA~g~~~~l~~~ 61 (300)
T PRK10279 23 VINALKKVGIEIDIVAGCSIGSLVGAAYACDRLSALEDW 61 (300)
T ss_pred HHHHHHHcCCCcCEEEEEcHHHHHHHHHHcCChHHHHHH
Confidence 445566678888889999999999999998765444433
No 251
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=82.74 E-value=4.6 Score=34.25 Aligned_cols=105 Identities=14% Similarity=0.090 Sum_probs=59.6
Q ss_pred CeEEEEccCCCc-----hhhhHHhhhhhhcCC-ceEEccCCC----C---C-CCCCCCCCCcchhHHHHHHHHHHHHHHh
Q 021158 25 PAVLFIHGFPEL-----WYSWRNQLLYLSSRG-YRAIAPDLR----G---Y-GDTDAPPSVTSYTALHLVGDLIGLLDKL 90 (316)
Q Consensus 25 p~il~~HG~~~~-----~~~~~~~~~~l~~~g-~~v~~~D~~----G---~-G~s~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (316)
.++|++-|.|.- -+.|+ .+.|+..+ .-|+.+++| | . |.++.+....-.+-+-..+.+++-+...
T Consensus 136 tVlVWiyGGGF~sGt~SLdvYd--Gk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGNmGl~DQqLAl~WV~~Ni~aF 213 (601)
T KOG4389|consen 136 TVLVWIYGGGFYSGTPSLDVYD--GKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGNMGLLDQQLALQWVQENIAAF 213 (601)
T ss_pred eEEEEEEcCccccCCcceeeec--cceeeeeccEEEEEeeeeeccceEEecCCCCCCCCccchHHHHHHHHHHHHhHHHh
Confidence 377888887631 12233 23444332 445555654 2 2 3333333333445555556777777778
Q ss_pred CCc--ceEEEEecHHHHHH-HHHHh-hchhHHhhhhhccCCCCCC
Q 021158 91 GIH--QVFLVGHDWGALIA-WYFCL-FRPDRVKALVNMSVPFPPR 131 (316)
Q Consensus 91 ~~~--~~~l~G~S~Gg~~a-~~~a~-~~p~~v~~~il~~~~~~~~ 131 (316)
|.+ ++.|+|.|.|+.-+ +++.+ .-...++..|+-++....+
T Consensus 214 GGnp~~vTLFGESAGaASv~aHLlsP~S~glF~raIlQSGS~~~p 258 (601)
T KOG4389|consen 214 GGNPSRVTLFGESAGAASVVAHLLSPGSRGLFHRAILQSGSLNNP 258 (601)
T ss_pred CCCcceEEEeccccchhhhhheecCCCchhhHHHHHhhcCCCCCC
Confidence 654 69999999998543 33322 1223688888888766543
No 252
>PF03283 PAE: Pectinacetylesterase
Probab=81.25 E-value=3 Score=34.35 Aligned_cols=22 Identities=32% Similarity=0.347 Sum_probs=17.7
Q ss_pred CcceEEEEecHHHHHHHHHHhh
Q 021158 92 IHQVFLVGHDWGALIAWYFCLF 113 (316)
Q Consensus 92 ~~~~~l~G~S~Gg~~a~~~a~~ 113 (316)
.++++|-|.|.||.-++..+-.
T Consensus 155 a~~vlltG~SAGG~g~~~~~d~ 176 (361)
T PF03283_consen 155 AKQVLLTGCSAGGLGAILHADY 176 (361)
T ss_pred cceEEEeccChHHHHHHHHHHH
Confidence 3579999999999988876644
No 253
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=80.75 E-value=3.9 Score=34.46 Aligned_cols=41 Identities=15% Similarity=0.338 Sum_probs=30.8
Q ss_pred HHHHHHHHhCCcceEEEEecHHHHHHHHHHhhchhHHhhhh
Q 021158 82 DLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALV 122 (316)
Q Consensus 82 ~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i 122 (316)
-+...+.+.++.+-++.|.|.|+.+|..++...++.+..++
T Consensus 90 GVLkaL~E~gl~p~vIsGTSaGAivAal~as~~~eel~~~l 130 (421)
T cd07230 90 GVLKALFEANLLPRIISGSSAGSIVAAILCTHTDEEIPELL 130 (421)
T ss_pred HHHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCHHHHHHHH
Confidence 34444455577777899999999999999998777655544
No 254
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=79.74 E-value=1.7 Score=35.16 Aligned_cols=31 Identities=29% Similarity=0.327 Sum_probs=25.0
Q ss_pred HHHHHHHhCCcceEEEEecHHHHHHHHHHhh
Q 021158 83 LIGLLDKLGIHQVFLVGHDWGALIAWYFCLF 113 (316)
Q Consensus 83 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 113 (316)
+.++++..|.++-.++|||+|=..|+.++..
T Consensus 74 l~~~l~~~Gi~P~~v~GhSlGE~aA~~aaG~ 104 (318)
T PF00698_consen 74 LARLLRSWGIKPDAVIGHSLGEYAALVAAGA 104 (318)
T ss_dssp HHHHHHHTTHCESEEEESTTHHHHHHHHTTS
T ss_pred hhhhhcccccccceeeccchhhHHHHHHCCc
Confidence 3456677798999999999999988877653
No 255
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=79.35 E-value=2.8 Score=33.44 Aligned_cols=31 Identities=26% Similarity=0.350 Sum_probs=25.1
Q ss_pred HHHHHHhCCcceEEEEecHHHHHHHHHHhhc
Q 021158 84 IGLLDKLGIHQVFLVGHDWGALIAWYFCLFR 114 (316)
Q Consensus 84 ~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 114 (316)
.++++..|.++-.++|||+|-..|+.++...
T Consensus 73 ~~~l~~~Gi~p~~~~GhSlGE~aA~~~ag~~ 103 (298)
T smart00827 73 ARLWRSWGVRPDAVVGHSLGEIAAAYVAGVL 103 (298)
T ss_pred HHHHHHcCCcccEEEecCHHHHHHHHHhCCC
Confidence 3556677999999999999999998877543
No 256
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=79.22 E-value=4.3 Score=29.33 Aligned_cols=34 Identities=21% Similarity=0.146 Sum_probs=26.1
Q ss_pred HHHHHHHhCCcceEEEEecHHHHHHHHHHhhchh
Q 021158 83 LIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPD 116 (316)
Q Consensus 83 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~ 116 (316)
+.+.+++.+...-.+.|.|.|+.++..++...+.
T Consensus 16 vl~aL~e~gi~~d~v~GtSaGAi~aa~~a~g~~~ 49 (172)
T cd07198 16 VAKALRERGPLIDIIAGTSAGAIVAALLASGRDL 49 (172)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCCH
Confidence 3444555577777899999999999999986543
No 257
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=79.18 E-value=9.3 Score=28.42 Aligned_cols=60 Identities=30% Similarity=0.364 Sum_probs=39.6
Q ss_pred CeEEEEccCCCchhhhHHhhh-hhhcCCc-eEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCcceEEEE
Q 021158 25 PAVLFIHGFPELWYSWRNQLL-YLSSRGY-RAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVG 99 (316)
Q Consensus 25 p~il~~HG~~~~~~~~~~~~~-~l~~~g~-~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 99 (316)
.+|++.||...++.......+ .|.++|| +|+....-|+. .++++.+.++..+.+++.|+-
T Consensus 139 ~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve~yP---------------~~d~vi~~l~~~~~~~v~L~P 200 (265)
T COG4822 139 ILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVEGYP---------------LVDTVIEYLRKNGIKEVHLIP 200 (265)
T ss_pred EEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEecCCC---------------cHHHHHHHHHHcCCceEEEee
Confidence 478999999887766555444 5677788 66666554442 234666777777877766653
No 258
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=78.63 E-value=5.9 Score=31.76 Aligned_cols=40 Identities=8% Similarity=0.198 Sum_probs=30.8
Q ss_pred HHHHHHHhCCcceEEEEecHHHHHHHHHHhhchhHHhhhh
Q 021158 83 LIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALV 122 (316)
Q Consensus 83 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i 122 (316)
+.+.+.+.+..+-++.|.|.|+.+|..++...++.+..++
T Consensus 86 VlkaL~e~gl~p~~i~GsSaGAivaa~~~~~t~~El~~~~ 125 (323)
T cd07231 86 VVRTLVEHQLLPRVIAGSSVGSIVCAIIATRTDEELQSFF 125 (323)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCHHHHHHHH
Confidence 3344445577778899999999999999987777666665
No 259
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=78.51 E-value=5.1 Score=31.23 Aligned_cols=70 Identities=21% Similarity=0.331 Sum_probs=44.5
Q ss_pred CeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCC--------CCCCCC-----CCCCcchhHHHHHHHHHHHHHHhC
Q 021158 25 PAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRG--------YGDTDA-----PPSVTSYTALHLVGDLIGLLDKLG 91 (316)
Q Consensus 25 p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G--------~G~s~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 91 (316)
|.|+|.-|.++. .+.|+..||.|+..|+-= .|..-. .+..-.-+.+.+.+-+.+.++..|
T Consensus 253 Pmi~fakG~g~~-------Le~l~~tG~DVvgLDWTvdp~ear~~~g~~VtlQGNlDP~~ly~s~e~it~~v~~mv~~fG 325 (359)
T KOG2872|consen 253 PMILFAKGSGGA-------LEELAQTGYDVVGLDWTVDPAEARRRVGNRVTLQGNLDPGVLYGSKEEITQLVKQMVKDFG 325 (359)
T ss_pred ceEEEEcCcchH-------HHHHHhcCCcEEeecccccHHHHHHhhCCceEEecCCChHHhcCCHHHHHHHHHHHHHHhC
Confidence 788999887654 677888899999999831 111100 010012245666777888888888
Q ss_pred CcceE-EEEec
Q 021158 92 IHQVF-LVGHD 101 (316)
Q Consensus 92 ~~~~~-l~G~S 101 (316)
.++.+ =+||.
T Consensus 326 ~~ryI~NLGHG 336 (359)
T KOG2872|consen 326 KSRYIANLGHG 336 (359)
T ss_pred ccceEEecCCC
Confidence 65544 36775
No 260
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=78.17 E-value=5.3 Score=33.52 Aligned_cols=41 Identities=20% Similarity=0.332 Sum_probs=31.6
Q ss_pred HHHHHHHHhCCcceEEEEecHHHHHHHHHHhhchhHHhhhh
Q 021158 82 DLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALV 122 (316)
Q Consensus 82 ~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i 122 (316)
-+...+.+.+..+-++.|.|.|+.+|..++...++.+..++
T Consensus 84 GVlkaL~e~gllp~iI~GtSAGAivaalla~~t~~el~~~~ 124 (407)
T cd07232 84 GVVKALLDADLLPNVISGTSGGSLVAALLCTRTDEELKQLL 124 (407)
T ss_pred HHHHHHHhCCCCCCEEEEECHHHHHHHHHHcCCHHHHHHHH
Confidence 34444455577777899999999999999998777776664
No 261
>PRK12467 peptide synthase; Provisional
Probab=78.12 E-value=9.7 Score=42.43 Aligned_cols=84 Identities=12% Similarity=0.061 Sum_probs=59.3
Q ss_pred CeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHh-CCcceEEEEecHH
Q 021158 25 PAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKL-GIHQVFLVGHDWG 103 (316)
Q Consensus 25 p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~G~S~G 103 (316)
+.+++.|...+....+.++...|... ..++.+..++.-..... ..++..++....+.+... ...+..+.|+|+|
T Consensus 3693 ~~l~~~h~~~r~~~~~~~l~~~l~~~-~~~~~l~~~~~~~d~~~----~~~~~~~~~~y~~~~~~~~~~~p~~l~g~s~g 3767 (3956)
T PRK12467 3693 PALFCRHEGLGTVFDYEPLAVILEGD-RHVLGLTCRHLLDDGWQ----DTSLQAMAVQYADYILWQQAKGPYGLLGWSLG 3767 (3956)
T ss_pred cceeeechhhcchhhhHHHHHHhCCC-CcEEEEeccccccccCC----ccchHHHHHHHHHHHHHhccCCCeeeeeeecc
Confidence 56999999988887888888888664 67888777654322221 234555666666555554 3347889999999
Q ss_pred HHHHHHHHhh
Q 021158 104 ALIAWYFCLF 113 (316)
Q Consensus 104 g~~a~~~a~~ 113 (316)
|.++..++..
T Consensus 3768 ~~~a~~~~~~ 3777 (3956)
T PRK12467 3768 GTLARLVAEL 3777 (3956)
T ss_pred hHHHHHHHHH
Confidence 9999988764
No 262
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=77.67 E-value=3.9 Score=32.79 Aligned_cols=33 Identities=27% Similarity=0.365 Sum_probs=26.7
Q ss_pred HHHHHHHHhCCcceEEEEecHHHHHHHHHHhhc
Q 021158 82 DLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFR 114 (316)
Q Consensus 82 ~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 114 (316)
-+.+.+++.|+..-.+.|.|+|+.++..++...
T Consensus 32 GvL~aLee~gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 32 GVIKALEEAGIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred HHHHHHHHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 445566666887778999999999999999874
No 263
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=77.63 E-value=3.4 Score=32.94 Aligned_cols=31 Identities=16% Similarity=-0.078 Sum_probs=24.6
Q ss_pred HHHHHHHhCCcceEEEEecHHHHHHHHHHhh
Q 021158 83 LIGLLDKLGIHQVFLVGHDWGALIAWYFCLF 113 (316)
Q Consensus 83 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 113 (316)
+.++++..|.++..++|||+|=..|+.++..
T Consensus 66 l~~~l~~~g~~P~~v~GhS~GE~aAa~~aG~ 96 (295)
T TIGR03131 66 AWRALLALLPRPSAVAGYSVGEYAAAVVAGV 96 (295)
T ss_pred HHHHHHhcCCCCcEEeecCHHHHHHHHHhCC
Confidence 3455566788899999999999998887754
No 264
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=76.83 E-value=5 Score=29.58 Aligned_cols=38 Identities=24% Similarity=0.315 Sum_probs=26.7
Q ss_pred HHHHHHhCCcceEEEEecHHHHHHHHHHhhch-hHHhhh
Q 021158 84 IGLLDKLGIHQVFLVGHDWGALIAWYFCLFRP-DRVKAL 121 (316)
Q Consensus 84 ~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p-~~v~~~ 121 (316)
.+.+++.+...-.+.|.|.||.+|..++...+ +.+..+
T Consensus 18 l~~L~e~~~~~d~i~GtSaGai~aa~~a~g~~~~~~~~~ 56 (194)
T cd07207 18 LKALEEAGILKKRVAGTSAGAITAALLALGYSAADIKDI 56 (194)
T ss_pred HHHHHHcCCCcceEEEECHHHHHHHHHHcCCCHHHHHHH
Confidence 33444556666789999999999999998643 334433
No 265
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=76.57 E-value=6.4 Score=32.71 Aligned_cols=40 Identities=20% Similarity=0.250 Sum_probs=30.8
Q ss_pred HHHHHHhCCcceEEEEecHHHHHHHHHHhhchhHHhhhhh
Q 021158 84 IGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVN 123 (316)
Q Consensus 84 ~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il 123 (316)
...+...|..+-++.|-|.|+.+|..+|...++.+..++.
T Consensus 102 ~kaL~e~gl~p~~i~GtS~Gaivaa~~a~~~~~e~~~~l~ 141 (391)
T cd07229 102 VKALWLRGLLPRIITGTATGALIAALVGVHTDEELLRFLD 141 (391)
T ss_pred HHHHHHcCCCCceEEEecHHHHHHHHHHcCCHHHHHHHHh
Confidence 3444555777788999999999999999977776666653
No 266
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=74.14 E-value=5.9 Score=31.10 Aligned_cols=32 Identities=16% Similarity=0.264 Sum_probs=25.5
Q ss_pred HHHHHHHhCCcceEEEEecHHHHHHHHHHhhc
Q 021158 83 LIGLLDKLGIHQVFLVGHDWGALIAWYFCLFR 114 (316)
Q Consensus 83 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 114 (316)
+.+.+++.++..-.+.|.|+|+.++..+|...
T Consensus 28 VL~aLeE~gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 28 ILQALEEAGIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHcCCCccEEEEECHHHHHHHHHHcCC
Confidence 44555667877677899999999999999863
No 267
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=73.86 E-value=4.6 Score=32.06 Aligned_cols=30 Identities=23% Similarity=0.196 Sum_probs=23.9
Q ss_pred HHHHHhC-CcceEEEEecHHHHHHHHHHhhc
Q 021158 85 GLLDKLG-IHQVFLVGHDWGALIAWYFCLFR 114 (316)
Q Consensus 85 ~~~~~~~-~~~~~l~G~S~Gg~~a~~~a~~~ 114 (316)
+.+...+ +++..++|||+|=..|+.++...
T Consensus 74 ~~l~~~g~i~p~~v~GhS~GE~aAa~~aG~l 104 (290)
T TIGR00128 74 LKLKEQGGLKPDFAAGHSLGEYSALVAAGAL 104 (290)
T ss_pred HHHHHcCCCCCCEEeecCHHHHHHHHHhCCC
Confidence 4445566 88999999999999988887654
No 268
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=73.19 E-value=6.7 Score=29.78 Aligned_cols=30 Identities=23% Similarity=0.279 Sum_probs=23.2
Q ss_pred HHHHHhCCcceEEEEecHHHHHHHHHHhhc
Q 021158 85 GLLDKLGIHQVFLVGHDWGALIAWYFCLFR 114 (316)
Q Consensus 85 ~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 114 (316)
+.+++.+.+.-.+.|.|.|+.++..+|...
T Consensus 20 ~aL~e~gi~~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 20 AALLEMGLEPSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred HHHHHcCCCceEEEEeCHHHHHHHHHHcCC
Confidence 334445666667999999999999999754
No 269
>COG3933 Transcriptional antiterminator [Transcription]
Probab=72.51 E-value=23 Score=29.85 Aligned_cols=73 Identities=18% Similarity=0.166 Sum_probs=55.1
Q ss_pred CeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCcceEEEEecHHH
Q 021158 25 PAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWGA 104 (316)
Q Consensus 25 p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg 104 (316)
.+||+.||...-+ +....+..|... --+.++|+| -..++.+..+.+.+.+++.+..+=+++=..||+
T Consensus 110 ~vIiiAHG~sTAS-SmaevanrLL~~-~~~~aiDMP-----------Ldvsp~~vle~l~e~~k~~~~~~GlllLVDMGS 176 (470)
T COG3933 110 KVIIIAHGYSTAS-SMAEVANRLLGE-EIFIAIDMP-----------LDVSPSDVLEKLKEYLKERDYRSGLLLLVDMGS 176 (470)
T ss_pred eEEEEecCcchHH-HHHHHHHHHhhc-cceeeecCC-----------CcCCHHHHHHHHHHHHHhcCccCceEEEEecch
Confidence 5899999987654 344556555555 468899998 567888999999999999887775677788998
Q ss_pred HHHHHH
Q 021158 105 LIAWYF 110 (316)
Q Consensus 105 ~~a~~~ 110 (316)
.....-
T Consensus 177 L~~f~~ 182 (470)
T COG3933 177 LTSFGS 182 (470)
T ss_pred HHHHHH
Confidence 766543
No 270
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=72.36 E-value=8.5 Score=27.90 Aligned_cols=31 Identities=26% Similarity=0.370 Sum_probs=23.8
Q ss_pred HHHHhCCcceEEEEecHHHHHHHHHHhhchh
Q 021158 86 LLDKLGIHQVFLVGHDWGALIAWYFCLFRPD 116 (316)
Q Consensus 86 ~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~ 116 (316)
.+++.+...-.+.|.|.|+.+|..++...+.
T Consensus 21 ~L~e~g~~~d~i~GtSaGAi~aa~~a~g~~~ 51 (175)
T cd07228 21 ALEEEGIEIDIIAGSSIGALVGALYAAGHLD 51 (175)
T ss_pred HHHHCCCCeeEEEEeCHHHHHHHHHHcCCCH
Confidence 3445566666789999999999999987554
No 271
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=72.08 E-value=6 Score=31.83 Aligned_cols=33 Identities=21% Similarity=0.317 Sum_probs=27.0
Q ss_pred HHHHHHHHhCCcceEEEEecHHHHHHHHHHhhc
Q 021158 82 DLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFR 114 (316)
Q Consensus 82 ~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 114 (316)
-+.+.+++.++.+-++.|.|+|+.++..+|...
T Consensus 28 GVl~aL~e~gi~~~~iaGtS~GAiva~l~A~g~ 60 (306)
T COG1752 28 GVLKALEEAGIPIDVIAGTSAGAIVAALYAAGM 60 (306)
T ss_pred HHHHHHHHcCCCccEEEecCHHHHHHHHHHcCC
Confidence 345666777888889999999999999999854
No 272
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=71.35 E-value=14 Score=27.57 Aligned_cols=38 Identities=13% Similarity=0.030 Sum_probs=27.7
Q ss_pred CCCeEEEEccCCCchhh--h-HHhhhhhhcCCceEEccCCC
Q 021158 23 TGPAVLFIHGFPELWYS--W-RNQLLYLSSRGYRAIAPDLR 60 (316)
Q Consensus 23 ~~p~il~~HG~~~~~~~--~-~~~~~~l~~~g~~v~~~D~~ 60 (316)
.++.|.|++-.+..... | ......|.+.|+.+..+++-
T Consensus 31 ~~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l~ 71 (224)
T COG3340 31 KRKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHLS 71 (224)
T ss_pred CCceEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeecc
Confidence 35799999988776544 2 44556788889888887753
No 273
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=70.93 E-value=4.6 Score=31.54 Aligned_cols=54 Identities=20% Similarity=0.134 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHhCC---cceEEEEecHHHHHHHHHHhhc---hhHHhhhhhccCCCCC
Q 021158 77 LHLVGDLIGLLDKLGI---HQVFLVGHDWGALIAWYFCLFR---PDRVKALVNMSVPFPP 130 (316)
Q Consensus 77 ~~~~~~~~~~~~~~~~---~~~~l~G~S~Gg~~a~~~a~~~---p~~v~~~il~~~~~~~ 130 (316)
..+.+.+.+.++.+.. .++++.|.|+|+.-+....... -+++.|.++.+++...
T Consensus 90 ~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~~s 149 (289)
T PF10081_consen 90 RALFEAVYARWSTLPEDRRPKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPFFS 149 (289)
T ss_pred HHHHHHHHHHHHhCCcccCCeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCCCC
Confidence 3444444444555532 3799999999998776654332 3468888888876543
No 274
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=70.92 E-value=12 Score=28.34 Aligned_cols=33 Identities=21% Similarity=0.272 Sum_probs=25.5
Q ss_pred HHHHHHHhCCcceEEEEecHHHHHHHHHHhhch
Q 021158 83 LIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRP 115 (316)
Q Consensus 83 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p 115 (316)
+.+.+.+.+...-.+.|.|.|+.+|..++...+
T Consensus 16 vl~aL~e~g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 16 VLKALAEAGIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCc
Confidence 334455557666678999999999999999875
No 275
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=70.88 E-value=29 Score=28.91 Aligned_cols=102 Identities=16% Similarity=0.088 Sum_probs=61.8
Q ss_pred eEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCC-CCCcchhHHHHHHHHHHHHHHh---CCcceEEEEec
Q 021158 26 AVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAP-PSVTSYTALHLVGDLIGLLDKL---GIHQVFLVGHD 101 (316)
Q Consensus 26 ~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~G~S 101 (316)
.++++--..+..+.-....+.+.+.|+-|+-.|..++-.--.. ++...+.+.++.....+..... .....+|.|--
T Consensus 50 ~villSd~~G~~d~~~s~a~al~~~~Alv~~vd~~~ylaaL~~dd~ecvylisd~Ealsr~~Qr~a~~g~yr~PVl~g~g 129 (456)
T COG3946 50 LVILLSDEAGIGDQERSRADALLARGALVAPVDLGAYLAALGADDNECVYLISDFEALSREAQRAADLGVYRLPVLTGPG 129 (456)
T ss_pred eeEEEEcccChhhhhcchhHHHhhcCCeeeccccchhhhccccCCCcceEEehhHHHHhHHHHHHhhccCcccceEeecC
Confidence 4555554444444444556777778899999998766433211 1123444444333333333333 23457788999
Q ss_pred HHHHHHHHHHhhchh-HHhhhhhccCC
Q 021158 102 WGALIAWYFCLFRPD-RVKALVNMSVP 127 (316)
Q Consensus 102 ~Gg~~a~~~a~~~p~-~v~~~il~~~~ 127 (316)
-||.+++..+++-|. .+.+.+.+.+.
T Consensus 130 ~Gg~~A~asaaqSp~atlag~Vsldp~ 156 (456)
T COG3946 130 QGGTLAYASAAQSPDATLAGAVSLDPT 156 (456)
T ss_pred CCcHHHHHHHhhChhhhhcCccCCCCC
Confidence 999999999998876 46666666543
No 276
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=70.69 E-value=38 Score=26.88 Aligned_cols=23 Identities=26% Similarity=0.387 Sum_probs=19.3
Q ss_pred CCcceEEEEecHHHHHHHHHHhh
Q 021158 91 GIHQVFLVGHDWGALIAWYFCLF 113 (316)
Q Consensus 91 ~~~~~~l~G~S~Gg~~a~~~a~~ 113 (316)
..++|.++|+|-|+..|-.+|..
T Consensus 90 ~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 90 PGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred CcceEEEEecCccHHHHHHHHHH
Confidence 34579999999999999988854
No 277
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=68.80 E-value=4 Score=30.09 Aligned_cols=33 Identities=12% Similarity=0.279 Sum_probs=24.4
Q ss_pred eEEEEcc---CCCchhhhHHhhhhhhcCCceEEccC
Q 021158 26 AVLFIHG---FPELWYSWRNQLLYLSSRGYRAIAPD 58 (316)
Q Consensus 26 ~il~~HG---~~~~~~~~~~~~~~l~~~g~~v~~~D 58 (316)
.||++|. ...+......+++.|.++||+.+.++
T Consensus 153 ~Iil~Hd~~~~~~t~~~l~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 153 DIILLHASDSAKQTVKALPTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CEEEEeCCCCcHhHHHHHHHHHHHHHHCCCEEEEHH
Confidence 5888994 22345567788889999999988764
No 278
>PHA02114 hypothetical protein
Probab=68.75 E-value=5.7 Score=25.05 Aligned_cols=34 Identities=12% Similarity=0.304 Sum_probs=28.6
Q ss_pred CeEEEEccCCCchhhhHHhhhhhhcCCceEEccC
Q 021158 25 PAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPD 58 (316)
Q Consensus 25 p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D 58 (316)
-+||+--.+..+..-|-.++..|.+.||+|++-.
T Consensus 83 gtivldvn~amsr~pwi~v~s~le~~g~~vvatq 116 (127)
T PHA02114 83 GTIVLDVNYAMSRAPWIKVISRLEEAGFNVVATQ 116 (127)
T ss_pred CeEEEEehhhhccCcHHHHHHHHHhcCceeeehh
Confidence 3677777788888889999999999999998743
No 279
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=67.43 E-value=5.9 Score=31.11 Aligned_cols=33 Identities=12% Similarity=0.215 Sum_probs=27.4
Q ss_pred eEEEEccCCCchhhhHHhhhhhhcCCceEEccC
Q 021158 26 AVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPD 58 (316)
Q Consensus 26 ~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D 58 (316)
.||++|....+......+++.|.++||+++.++
T Consensus 232 ~IILmHd~~~T~~aL~~iI~~Lk~kGy~fvtl~ 264 (268)
T TIGR02873 232 AMVLMHPTASSTEGLEEMITIIKEKGYKIGTIT 264 (268)
T ss_pred cEEEEcCCccHHHHHHHHHHHHHHCCCEEEeHH
Confidence 578999776677778888999999999988775
No 280
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=66.07 E-value=37 Score=23.13 Aligned_cols=29 Identities=24% Similarity=0.218 Sum_probs=19.8
Q ss_pred CCCeEEEEccCCCchhhhH--HhhhhhhcCC
Q 021158 23 TGPAVLFIHGFPELWYSWR--NQLLYLSSRG 51 (316)
Q Consensus 23 ~~p~il~~HG~~~~~~~~~--~~~~~l~~~g 51 (316)
++|.|+-+||+.|..-.|- -+++.|-..|
T Consensus 51 ~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G 81 (127)
T PF06309_consen 51 RKPLVLSFHGWTGTGKNFVSRLIAEHLYKSG 81 (127)
T ss_pred CCCEEEEeecCCCCcHHHHHHHHHHHHHhcc
Confidence 4789999999999887663 2445543333
No 281
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=65.37 E-value=7 Score=29.76 Aligned_cols=34 Identities=21% Similarity=0.277 Sum_probs=27.0
Q ss_pred CeEEEEccC-CCchhhhHHhhhhhhcCCceEEccC
Q 021158 25 PAVLFIHGF-PELWYSWRNQLLYLSSRGYRAIAPD 58 (316)
Q Consensus 25 p~il~~HG~-~~~~~~~~~~~~~l~~~g~~v~~~D 58 (316)
..||++|.. ..+......+++.|.++||+.+.++
T Consensus 187 g~IiLlHd~~~~t~~aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 187 GAILLLHAVSKDNAEALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEhH
Confidence 368888974 4456678889999999999988875
No 282
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=65.14 E-value=15 Score=26.59 Aligned_cols=30 Identities=20% Similarity=0.261 Sum_probs=22.7
Q ss_pred HHHHHhCCcceEEEEecHHHHHHHHHHhhc
Q 021158 85 GLLDKLGIHQVFLVGHDWGALIAWYFCLFR 114 (316)
Q Consensus 85 ~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 114 (316)
+.+++.+...-.+.|.|.|+.+|..++...
T Consensus 20 ~~L~~~~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 20 KALEEAGIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHcCCCeeEEEEECHHHHHHHHHHcCC
Confidence 334445655667899999999999998764
No 283
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=64.44 E-value=7.5 Score=33.98 Aligned_cols=37 Identities=11% Similarity=-0.093 Sum_probs=28.5
Q ss_pred eEEEEecHHHHHHHHHHhhchh-HHhhhhhccCCCCCC
Q 021158 95 VFLVGHDWGALIAWYFCLFRPD-RVKALVNMSVPFPPR 131 (316)
Q Consensus 95 ~~l~G~S~Gg~~a~~~a~~~p~-~v~~~il~~~~~~~~ 131 (316)
++.-+.|-||..++..|.+.-+ .|.+++...|...+.
T Consensus 287 VIAssvSNGGgAal~AAEqD~~glIdgVvv~EP~v~~~ 324 (690)
T PF10605_consen 287 VIASSVSNGGGAALAAAEQDTQGLIDGVVVSEPNVNLP 324 (690)
T ss_pred EEEEeecCccHHHHhHhhcccCCceeeEEecCCccCCC
Confidence 5556899999999999987644 678888777766543
No 284
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=64.26 E-value=25 Score=26.32 Aligned_cols=62 Identities=19% Similarity=0.140 Sum_probs=36.6
Q ss_pred CCeEEEEccCCCch---hhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHH
Q 021158 24 GPAVLFIHGFPELW---YSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDK 89 (316)
Q Consensus 24 ~p~il~~HG~~~~~---~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~ 89 (316)
.++++++||..... ..-..+...|.+.|..+...-+||-|..-.. .....++.+.+.+++++
T Consensus 144 ~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~----~~~~~~~~~~~~~f~~~ 208 (213)
T PF00326_consen 144 KPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGN----PENRRDWYERILDFFDK 208 (213)
T ss_dssp GSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTS----HHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCC----chhHHHHHHHHHHHHHH
Confidence 58999999986542 3345567778887876666666654442211 12233555666666654
No 285
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=64.20 E-value=58 Score=27.51 Aligned_cols=75 Identities=19% Similarity=0.127 Sum_probs=40.7
Q ss_pred CeEEEEccCCCc---hhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHH--hCCcceEEEE
Q 021158 25 PAVLFIHGFPEL---WYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDK--LGIHQVFLVG 99 (316)
Q Consensus 25 p~il~~HG~~~~---~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~G 99 (316)
.++|+++.+... .......+..|.+.|+.|+-+. +|+-.+.......-.+.++.+..+...+.. +..+++.+-|
T Consensus 117 ~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~ii~P~-~g~la~~~~g~gr~~~~~~I~~~~~~~~~~~~l~gk~vlITg 195 (399)
T PRK05579 117 APVLVAPAMNTQMWENPATQRNLATLRSRGVEIIGPA-SGRLACGDVGPGRMAEPEEIVAAAERALSPKDLAGKRVLITA 195 (399)
T ss_pred CCEEEEeCCChhHcCCHHHHHHHHHHHHCCCEEECCC-CccccCCCcCCCCCCCHHHHHHHHHHHhhhcccCCCEEEEeC
Confidence 467777754322 1223455677888899988665 343111111111344667777777766643 3334566666
Q ss_pred e
Q 021158 100 H 100 (316)
Q Consensus 100 ~ 100 (316)
-
T Consensus 196 G 196 (399)
T PRK05579 196 G 196 (399)
T ss_pred C
Confidence 6
No 286
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=63.58 E-value=0.64 Score=36.75 Aligned_cols=91 Identities=26% Similarity=0.295 Sum_probs=53.2
Q ss_pred CCCeEEEEccCCCchhhhHHhhhhhhcCCceEEccCC----------CCCCCCCCCCCCc------chhHHHHHHHHHHH
Q 021158 23 TGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDL----------RGYGDTDAPPSVT------SYTALHLVGDLIGL 86 (316)
Q Consensus 23 ~~p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~----------~G~G~s~~~~~~~------~~~~~~~~~~~~~~ 86 (316)
.-|.+++.||++.....-......++..++.+...+. +|++.+....... ......+..+....
T Consensus 48 ~~p~v~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (299)
T COG1073 48 KLPAVVFLHGFGSSKEQSLGYAVLLAEKGYRVLAGDASLFGESGGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKDYRLL 127 (299)
T ss_pred cCceEEeccCccccccCcchHHHHhhhceeEEeeeccccccccccccccccCccccccccchhheeeeccccccHHHHHH
Confidence 4799999999998887766678888888888777764 3332222211000 00011111111111
Q ss_pred HHHhCCcceEEEEecHHHHHHHHHHhhch
Q 021158 87 LDKLGIHQVFLVGHDWGALIAWYFCLFRP 115 (316)
Q Consensus 87 ~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p 115 (316)
... ..+....|+++|+..+..++...+
T Consensus 128 ~~~--~~~~~~~g~~~~~~~~~~~~~~~~ 154 (299)
T COG1073 128 GAS--LGPRILAGLSLGGPSAGALLAWGP 154 (299)
T ss_pred hhh--cCcceEEEEEeeccchHHHhhcch
Confidence 111 147778888888888887777765
No 287
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=62.97 E-value=82 Score=26.53 Aligned_cols=75 Identities=15% Similarity=0.118 Sum_probs=40.8
Q ss_pred CeEEEEccCCCc---hhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHH---hCCcceEEE
Q 021158 25 PAVLFIHGFPEL---WYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDK---LGIHQVFLV 98 (316)
Q Consensus 25 p~il~~HG~~~~---~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~ 98 (316)
.++|+++-+... .......+..|.+.|+.|+-+.. |+-.+.........+.+++++.+...+.. +..+++.+.
T Consensus 113 ~plviaPamn~~m~~~p~~~~Nl~~L~~~G~~vv~P~~-g~~ac~~~g~g~~~~~~~i~~~v~~~~~~~~~~~~~~vlit 191 (390)
T TIGR00521 113 APIILAPAMNENMYNNPAVQENIKRLKDDGYIFIEPDS-GLLACGDEGKGRLAEPETIVKAAEREFSPKEDLEGKRVLIT 191 (390)
T ss_pred CCEEEEeCCChhhcCCHHHHHHHHHHHHCCcEEECCCC-cccccccccCCCCCCHHHHHHHHHHHHhhccccCCceEEEe
Confidence 456666664322 22345556778888888776653 32211111111344677777777776654 433566666
Q ss_pred Ee
Q 021158 99 GH 100 (316)
Q Consensus 99 G~ 100 (316)
|-
T Consensus 192 ~g 193 (390)
T TIGR00521 192 AG 193 (390)
T ss_pred cC
Confidence 65
No 288
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=62.55 E-value=57 Score=24.58 Aligned_cols=85 Identities=16% Similarity=0.095 Sum_probs=47.8
Q ss_pred CCCeEEEEccCCCchhh-hHHhhhhhhcC-CceEEccCCCCCCCCCCCC---CC-----cchhHHHHHHH-----HHHHH
Q 021158 23 TGPAVLFIHGFPELWYS-WRNQLLYLSSR-GYRAIAPDLRGYGDTDAPP---SV-----TSYTALHLVGD-----LIGLL 87 (316)
Q Consensus 23 ~~p~il~~HG~~~~~~~-~~~~~~~l~~~-g~~v~~~D~~G~G~s~~~~---~~-----~~~~~~~~~~~-----~~~~~ 87 (316)
..+.|++++-.+..... ...+...|.+. |+.+..++... ..+... .. ..-+...+.+. +.+.+
T Consensus 30 ~~~~i~~IptAs~~~~~~~~~~~~a~~~l~G~~~~~~~~~~--~~~~~~~l~~ad~I~l~GG~~~~~~~~l~~~~l~~~l 107 (212)
T cd03146 30 ARPKVLFVPTASGDRDEYTARFYAAFESLRGVEVSHLHLFD--TEDPLDALLEADVIYVGGGNTFNLLAQWREHGLDAIL 107 (212)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHHhhccCcEEEEEeccC--cccHHHHHhcCCEEEECCchHHHHHHHHHHcCHHHHH
Confidence 35789999987775444 44566778888 89988887644 111000 00 00011112211 23333
Q ss_pred HHhCCcceEEEEecHHHHHHHH
Q 021158 88 DKLGIHQVFLVGHDWGALIAWY 109 (316)
Q Consensus 88 ~~~~~~~~~l~G~S~Gg~~a~~ 109 (316)
+..-.+...++|.|.|+++...
T Consensus 108 ~~~~~~g~~i~G~SAGa~i~~~ 129 (212)
T cd03146 108 KAALERGVVYIGWSAGSNCWFP 129 (212)
T ss_pred HHHHHCCCEEEEECHhHHhhCC
Confidence 3332245789999999988766
No 289
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=62.33 E-value=11 Score=32.99 Aligned_cols=31 Identities=26% Similarity=0.324 Sum_probs=25.6
Q ss_pred HHHH-HHhCCcceEEEEecHHHHHHHHHHhhc
Q 021158 84 IGLL-DKLGIHQVFLVGHDWGALIAWYFCLFR 114 (316)
Q Consensus 84 ~~~~-~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 114 (316)
.+++ +..|++|-.++|||+|=..|+..|.-.
T Consensus 255 a~ll~~~~GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 255 TQLLCDEFAIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HHHHHHhcCCCCCEEeecCHHHHHHHHHhCCC
Confidence 3445 578999999999999999999888755
No 290
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=60.48 E-value=47 Score=22.03 Aligned_cols=72 Identities=14% Similarity=0.010 Sum_probs=44.4
Q ss_pred eEEEEccCCCchhhhHHhhhhhhcC-CceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhC-CcceEEEEecHH
Q 021158 26 AVLFIHGFPELWYSWRNQLLYLSSR-GYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLG-IHQVFLVGHDWG 103 (316)
Q Consensus 26 ~il~~HG~~~~~~~~~~~~~~l~~~-g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~G~S~G 103 (316)
.||.-|| .-+..+...+..+... --.+.++++. ...+.+++.+.+.+.++..+ .+.+.++-==.|
T Consensus 2 iii~sHG--~~A~g~~~~~~~i~G~~~~~i~~~~~~-----------~~~~~~~~~~~l~~~i~~~~~~~~vlil~Dl~g 68 (116)
T PF03610_consen 2 IIIASHG--SLAEGLLESAEMILGEDQDNIEAVDLY-----------PDESIEDFEEKLEEAIEELDEGDGVLILTDLGG 68 (116)
T ss_dssp EEEEEET--THHHHHHHHHHHHHTSTCSSEEEEEET-----------TTSCHHHHHHHHHHHHHHCCTTSEEEEEESSTT
T ss_pred EEEEECc--HHHHHHHHHHHHHcCCCcccEEEEECc-----------CCCCHHHHHHHHHHHHHhccCCCcEEEEeeCCC
Confidence 5788899 4444555555555443 2356666654 23467888889999998886 345666655555
Q ss_pred HHHHHHH
Q 021158 104 ALIAWYF 110 (316)
Q Consensus 104 g~~a~~~ 110 (316)
|...-.+
T Consensus 69 gsp~n~a 75 (116)
T PF03610_consen 69 GSPFNEA 75 (116)
T ss_dssp SHHHHHH
T ss_pred CccchHH
Confidence 5444433
No 291
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=60.44 E-value=21 Score=28.01 Aligned_cols=34 Identities=24% Similarity=0.223 Sum_probs=24.6
Q ss_pred HHHHHHhCCc-ceEEEEecHHHHHHHHHHhhchhH
Q 021158 84 IGLLDKLGIH-QVFLVGHDWGALIAWYFCLFRPDR 117 (316)
Q Consensus 84 ~~~~~~~~~~-~~~l~G~S~Gg~~a~~~a~~~p~~ 117 (316)
.+.+.+.+.. .-.+.|.|.|+.++..++...+.+
T Consensus 17 l~al~e~~~~~fd~i~GtSaGAi~a~~~~~g~~~~ 51 (266)
T cd07208 17 LDAFLEAGIRPFDLVIGVSAGALNAASYLSGQRGR 51 (266)
T ss_pred HHHHHHcCCCCCCEEEEECHHHHhHHHHHhCCcch
Confidence 3344444555 447899999999999999876543
No 292
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=59.06 E-value=27 Score=26.78 Aligned_cols=34 Identities=24% Similarity=0.167 Sum_probs=24.4
Q ss_pred HHHHHHHhCCc--ceEEEEecHHHHHHHHHHhhchh
Q 021158 83 LIGLLDKLGIH--QVFLVGHDWGALIAWYFCLFRPD 116 (316)
Q Consensus 83 ~~~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~~p~ 116 (316)
+.+.+.+.++. .-.+.|.|.|+.++..++...+.
T Consensus 17 Vl~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~~~ 52 (233)
T cd07224 17 VLSLLIEAGVINETTPLAGASAGSLAAACSASGLSP 52 (233)
T ss_pred HHHHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCCCH
Confidence 33444455655 34799999999999999987543
No 293
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=58.94 E-value=22 Score=28.46 Aligned_cols=34 Identities=15% Similarity=0.163 Sum_probs=25.6
Q ss_pred HHHHHhCCcceEEEEecHHHHHHHHHHhhchhHH
Q 021158 85 GLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRV 118 (316)
Q Consensus 85 ~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v 118 (316)
+.+...+..+-++.|.|.|+.+|..++....+.+
T Consensus 89 ~aL~e~~l~~~~i~GtSaGAi~aa~~~~~~~~El 122 (298)
T cd07206 89 KALWEQDLLPRVISGSSAGAIVAALLGTHTDEEL 122 (298)
T ss_pred HHHHHcCCCCCEEEEEcHHHHHHHHHHcCCcHHH
Confidence 3334456667789999999999999998765544
No 294
>PRK06490 glutamine amidotransferase; Provisional
Probab=58.06 E-value=86 Score=24.25 Aligned_cols=35 Identities=11% Similarity=-0.043 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHhCCcceEEEEecHHHHHHHHHH
Q 021158 77 LHLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFC 111 (316)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a 111 (316)
..+...+.++++..-..++=++|.|+|..+...+.
T Consensus 69 ~~wi~~~~~~i~~~~~~~~PvLGIC~G~Qlla~al 103 (239)
T PRK06490 69 DDFIRREIDWISVPLKENKPFLGICLGAQMLARHL 103 (239)
T ss_pred chHHHHHHHHHHHHHHCCCCEEEECHhHHHHHHHc
Confidence 34556666666654323456899999998877763
No 295
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=57.75 E-value=50 Score=25.38 Aligned_cols=89 Identities=13% Similarity=0.073 Sum_probs=46.8
Q ss_pred CCCeEEEEccCCCc--hhhh-HHhhhhhhcCCceEEccCCCCCC-----CCCC--CCCCcchhHHHHHH--HHHHHHHHh
Q 021158 23 TGPAVLFIHGFPEL--WYSW-RNQLLYLSSRGYRAIAPDLRGYG-----DTDA--PPSVTSYTALHLVG--DLIGLLDKL 90 (316)
Q Consensus 23 ~~p~il~~HG~~~~--~~~~-~~~~~~l~~~g~~v~~~D~~G~G-----~s~~--~~~~~~~~~~~~~~--~~~~~~~~~ 90 (316)
.+|.|+|++-.+.. ...| ......+.+.|+.|..++.+.-- ..+. .........-...+ .+.+.++..
T Consensus 30 ~~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~~~d~~~~l~~ad~I~v~GGnt~~l~~~l~~~gl~~~l~~~ 109 (233)
T PRK05282 30 GRRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHRVADPVAAIENAEAIFVGGGNTFQLLKQLYERGLLAPIREA 109 (233)
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEeccchhhHHHHhcCCEEEECCccHHHHHHHHHHCCcHHHHHHH
Confidence 46889999987733 3333 34556777889998888765210 0000 00111122221111 222333222
Q ss_pred CCcceEEEEecHHHHHHHHHH
Q 021158 91 GIHQVFLVGHDWGALIAWYFC 111 (316)
Q Consensus 91 ~~~~~~l~G~S~Gg~~a~~~a 111 (316)
=.+-..++|.|.|+.++....
T Consensus 110 ~~~G~~~~G~SAGAii~~~~i 130 (233)
T PRK05282 110 VKNGTPYIGWSAGANVAGPTI 130 (233)
T ss_pred HHCCCEEEEECHHHHhhhccc
Confidence 112477999999998855433
No 296
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=57.74 E-value=39 Score=27.46 Aligned_cols=53 Identities=15% Similarity=0.164 Sum_probs=31.1
Q ss_pred eEEEeCCeeEEEEEeCC-------CCeEEEEccCCCchhhhHHhhhhhhcC--CceEEccCCC
Q 021158 7 TTVATNGINMHVASIGT-------GPAVLFIHGFPELWYSWRNQLLYLSSR--GYRAIAPDLR 60 (316)
Q Consensus 7 ~~~~~~g~~l~~~~~g~-------~p~il~~HG~~~~~~~~~~~~~~l~~~--g~~v~~~D~~ 60 (316)
+|-+..+-.+||...++ +++=+|+||.|... .-..+.++|.++ ...|+.+|.-
T Consensus 187 Qf~np~Np~~hy~ttg~EI~~q~~g~vDi~V~gaGTGG-TitgvGRylke~~~~~kVv~vdp~ 248 (362)
T KOG1252|consen 187 QFHNPGNPLAHYETTGPEIWRQLDGKVDIFVAGAGTGG-TITGVGRYLKEQNPNIKVVGVDPQ 248 (362)
T ss_pred HhcCCCCcccccccccHHHHHHhcCCCCEEEeccCCCc-eeechhHHHHHhCCCCEEEEeCCC
Confidence 33444555678887764 67778888876542 222334444443 3677777753
No 297
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=56.88 E-value=17 Score=25.86 Aligned_cols=35 Identities=20% Similarity=0.137 Sum_probs=26.0
Q ss_pred CeEEEEccCCCchhhh--HHhhhhhhcCCceEEccCC
Q 021158 25 PAVLFIHGFPELWYSW--RNQLLYLSSRGYRAIAPDL 59 (316)
Q Consensus 25 p~il~~HG~~~~~~~~--~~~~~~l~~~g~~v~~~D~ 59 (316)
|.+|++-|.+++.-.- ..+...|.+.|+.++.+|-
T Consensus 2 g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LDg 38 (156)
T PF01583_consen 2 GFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLDG 38 (156)
T ss_dssp -EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEecC
Confidence 6899999998877552 4456778888999999973
No 298
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=56.51 E-value=11 Score=28.66 Aligned_cols=37 Identities=19% Similarity=0.299 Sum_probs=28.2
Q ss_pred CCeEEEEccCCCch--hhhHHhhhhhhcCCceEEccCCC
Q 021158 24 GPAVLFIHGFPELW--YSWRNQLLYLSSRGYRAIAPDLR 60 (316)
Q Consensus 24 ~p~il~~HG~~~~~--~~~~~~~~~l~~~g~~v~~~D~~ 60 (316)
.|+||++.|+.++. ..-..+...|..+|++|.++.-|
T Consensus 30 ~~vlIl~eG~d~sGKg~~I~~l~~~lDPR~~~v~~~~~p 68 (228)
T PF03976_consen 30 IPVLILFEGWDASGKGGTINRLIEWLDPRGFRVHAFGKP 68 (228)
T ss_dssp HEEEEEEEESTTSSHHHHHHHHHCCS-GGGEEEEE-SS-
T ss_pred CcEEEEEeccccCCchHHHHHHHHhCCCCeeEEEeCCCC
Confidence 37899999997765 44678889999999999998866
No 299
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=55.77 E-value=60 Score=25.30 Aligned_cols=38 Identities=16% Similarity=0.122 Sum_probs=24.6
Q ss_pred CCCeEEEEccCCCchhh-hHHhhhhhhcCCce-EEccCCC
Q 021158 23 TGPAVLFIHGFPELWYS-WRNQLLYLSSRGYR-AIAPDLR 60 (316)
Q Consensus 23 ~~p~il~~HG~~~~~~~-~~~~~~~l~~~g~~-v~~~D~~ 60 (316)
+.|.|++++-.+..... .+.....|.+.|+. |-.++.+
T Consensus 27 ~~~rI~~iptAS~~~~~~~~~~~~~~~~lG~~~v~~l~i~ 66 (250)
T TIGR02069 27 EDAIIVIITSASEEPREVGERYITIFSRLGVKEVKILDVR 66 (250)
T ss_pred CCceEEEEeCCCCChHHHHHHHHHHHHHcCCceeEEEecC
Confidence 35789999976655433 45556677777874 5556654
No 300
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=55.73 E-value=68 Score=22.84 Aligned_cols=72 Identities=18% Similarity=0.133 Sum_probs=39.4
Q ss_pred hhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCcceEEEEecHHHHHHHHHHh---------h
Q 021158 43 QLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCL---------F 113 (316)
Q Consensus 43 ~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~---------~ 113 (316)
+...+.+ +-.++++|-.| ..++-.++++.+..+...-..+=++++|-|.|=.-.+.-.+ .
T Consensus 60 il~~i~~-~~~~i~Ld~~G----------k~~sS~~fA~~l~~~~~~g~~~i~F~IGG~~G~~~~~~~~a~~~lSLS~mT 128 (155)
T PF02590_consen 60 ILKKIPP-NDYVILLDERG----------KQLSSEEFAKKLERWMNQGKSDIVFIIGGADGLSEEVRKRADEKLSLSKMT 128 (155)
T ss_dssp HHCTSHT-TSEEEEE-TTS----------EE--HHHHHHHHHHHHHTTS-EEEEEE-BTTB--HHHHHH-SEEEES-SS-
T ss_pred HHhhccC-CCEEEEEcCCC----------ccCChHHHHHHHHHHHhcCCceEEEEEecCCCCCHHHHhhcCceEEEecCC
Confidence 3444444 46788999876 46677888888877766533244668999998544433222 2
Q ss_pred chhHHhhhhhcc
Q 021158 114 RPDRVKALVNMS 125 (316)
Q Consensus 114 ~p~~v~~~il~~ 125 (316)
.|..+..+|++.
T Consensus 129 fpH~larlvL~E 140 (155)
T PF02590_consen 129 FPHQLARLVLLE 140 (155)
T ss_dssp --HHHHHHHHHH
T ss_pred CcHHHHHHHHHH
Confidence 466666666654
No 301
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=55.30 E-value=34 Score=26.50 Aligned_cols=20 Identities=30% Similarity=0.238 Sum_probs=17.4
Q ss_pred EEEEecHHHHHHHHHHhhch
Q 021158 96 FLVGHDWGALIAWYFCLFRP 115 (316)
Q Consensus 96 ~l~G~S~Gg~~a~~~a~~~p 115 (316)
.+.|.|.|+.+|..++...+
T Consensus 33 ~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 33 KISGASAGALAACCLLCDLP 52 (245)
T ss_pred eEEEEcHHHHHHHHHHhCCc
Confidence 48999999999999998654
No 302
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=54.72 E-value=19 Score=28.22 Aligned_cols=37 Identities=8% Similarity=0.079 Sum_probs=30.9
Q ss_pred CCeEEEEccCCCch--hhhHHhhhhhhcCCceEEccCCC
Q 021158 24 GPAVLFIHGFPELW--YSWRNQLLYLSSRGYRAIAPDLR 60 (316)
Q Consensus 24 ~p~il~~HG~~~~~--~~~~~~~~~l~~~g~~v~~~D~~ 60 (316)
.|+||++.|+.++. ..-..+...|..+|++|+++.-|
T Consensus 55 ~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~P 93 (264)
T TIGR03709 55 RSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKAP 93 (264)
T ss_pred CcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCCC
Confidence 48999999997654 45788899999999999998655
No 303
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=53.92 E-value=25 Score=21.37 Aligned_cols=24 Identities=21% Similarity=0.198 Sum_probs=17.8
Q ss_pred CCcceEEEEecHHHHHHHHHHhhc
Q 021158 91 GIHQVFLVGHDWGALIAWYFCLFR 114 (316)
Q Consensus 91 ~~~~~~l~G~S~Gg~~a~~~a~~~ 114 (316)
+-+++.++|-|.|=.+|.+.+..+
T Consensus 38 GpK~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 38 GPKKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp S-SEEEEES-SSHHHHHHHHHHHH
T ss_pred CCceEEEEecCCcccHHHHHHHHh
Confidence 446788999999999998777654
No 304
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=53.66 E-value=33 Score=26.58 Aligned_cols=23 Identities=22% Similarity=0.436 Sum_probs=18.1
Q ss_pred EEEEecHHHHHHHHHHhhchhHHh
Q 021158 96 FLVGHDWGALIAWYFCLFRPDRVK 119 (316)
Q Consensus 96 ~l~G~S~Gg~~a~~~a~~~p~~v~ 119 (316)
.+.|.|.|+.++..++. .++++.
T Consensus 34 ~i~GtSaGAl~aa~~a~-~~~~~~ 56 (246)
T cd07222 34 RFAGASAGSLVAAVLLT-APEKIE 56 (246)
T ss_pred EEEEECHHHHHHHHHhc-ChHHHH
Confidence 68999999999999984 344443
No 305
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=53.12 E-value=27 Score=28.23 Aligned_cols=19 Identities=16% Similarity=0.319 Sum_probs=16.4
Q ss_pred EEEEecHHHHHHHHHHhhc
Q 021158 96 FLVGHDWGALIAWYFCLFR 114 (316)
Q Consensus 96 ~l~G~S~Gg~~a~~~a~~~ 114 (316)
.+.|.|.||.+|..++...
T Consensus 35 ~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 35 WIAGTSTGGILALALLHGK 53 (312)
T ss_pred EEEeeChHHHHHHHHHcCC
Confidence 4779999999999999754
No 306
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=52.75 E-value=40 Score=26.12 Aligned_cols=20 Identities=20% Similarity=0.090 Sum_probs=17.9
Q ss_pred EEEEecHHHHHHHHHHhhch
Q 021158 96 FLVGHDWGALIAWYFCLFRP 115 (316)
Q Consensus 96 ~l~G~S~Gg~~a~~~a~~~p 115 (316)
.+.|.|.|+.++..++...+
T Consensus 34 ~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred EEEEEcHHHHHHHHHHhCCC
Confidence 78999999999999998754
No 307
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=52.73 E-value=18 Score=25.88 Aligned_cols=73 Identities=14% Similarity=0.098 Sum_probs=45.9
Q ss_pred EEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCC----CCcchhHHHHHHHHHHHHHHhCCcceEEEEecHH
Q 021158 28 LFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPP----SVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWG 103 (316)
Q Consensus 28 l~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~G 103 (316)
|++.|.|+|...-+.++..|..+ |.--.+-+|..-.|.... -..+|.++. -....++.++..-=+|+|.|-.
T Consensus 44 vl~cGNGgSaadAqHfaael~gR-f~~eR~~lpaIaLt~dsS~lTai~NDy~yd~---vFsRqveA~g~~GDvLigISTS 119 (176)
T COG0279 44 VLACGNGGSAADAQHFAAELTGR-FEKERPSLPAIALSTDSSVLTAIANDYGYDE---VFSRQVEALGQPGDVLIGISTS 119 (176)
T ss_pred EEEECCCcchhhHHHHHHHHhhH-HHhcCCCCCeeEeecccHHHhhhhccccHHH---HHHHHHHhcCCCCCEEEEEeCC
Confidence 56778888888888888888776 655555555544442211 112344443 2345666777666789999888
Q ss_pred H
Q 021158 104 A 104 (316)
Q Consensus 104 g 104 (316)
|
T Consensus 120 G 120 (176)
T COG0279 120 G 120 (176)
T ss_pred C
Confidence 7
No 308
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=52.27 E-value=42 Score=26.20 Aligned_cols=27 Identities=26% Similarity=0.268 Sum_probs=20.5
Q ss_pred ceEEEEecHHHHHHHHHHhhch-hHHhh
Q 021158 94 QVFLVGHDWGALIAWYFCLFRP-DRVKA 120 (316)
Q Consensus 94 ~~~l~G~S~Gg~~a~~~a~~~p-~~v~~ 120 (316)
.-.+.|.|.|+.++..++...+ +++..
T Consensus 33 ~~~i~GtSAGAl~aa~~asg~~~~~~~~ 60 (252)
T cd07221 33 ARMFFGASAGALHCVTFLSGLPLDQILQ 60 (252)
T ss_pred CCEEEEEcHHHHHHHHHHhCCCHHHHHH
Confidence 3468999999999999998655 34433
No 309
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=52.14 E-value=23 Score=27.10 Aligned_cols=37 Identities=19% Similarity=0.129 Sum_probs=30.9
Q ss_pred CCeEEEEccCCCch--hhhHHhhhhhhcCCceEEccCCC
Q 021158 24 GPAVLFIHGFPELW--YSWRNQLLYLSSRGYRAIAPDLR 60 (316)
Q Consensus 24 ~p~il~~HG~~~~~--~~~~~~~~~l~~~g~~v~~~D~~ 60 (316)
.|+||++.|+.++. ..-..+...|..+|+.|.++.-|
T Consensus 30 ~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~p 68 (230)
T TIGR03707 30 ARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKP 68 (230)
T ss_pred CCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCC
Confidence 48999999997654 45778899999999999998765
No 310
>PF04244 DPRP: Deoxyribodipyrimidine photo-lyase-related protein; InterPro: IPR007357 This family appears to be related to DNA photolyases.; PDB: 3ZXS_A.
Probab=51.94 E-value=30 Score=26.41 Aligned_cols=49 Identities=18% Similarity=0.265 Sum_probs=28.3
Q ss_pred hhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCcceEEE
Q 021158 39 SWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLV 98 (316)
Q Consensus 39 ~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 98 (316)
.++.+++.|.++|+.|..+.+.- ..+...+.+.|...++..+.+.+.++
T Consensus 50 aMRhfa~~L~~~G~~V~Y~~~~~-----------~~~~~s~~~~L~~~~~~~~~~~~~~~ 98 (224)
T PF04244_consen 50 AMRHFADELRAKGFRVHYIELDD-----------PENTQSFEDALARALKQHGIDRLHVM 98 (224)
T ss_dssp HHHHHHHHHHHTT--EEEE-TT------------TT--SSHHHHHHHHHHHH----EEEE
T ss_pred HHHHHHHHHHhCCCEEEEEeCCC-----------ccccccHHHHHHHHHHHcCCCEEEEE
Confidence 35677889999999999988652 11223456677788888887777655
No 311
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=51.32 E-value=48 Score=27.46 Aligned_cols=84 Identities=19% Similarity=0.144 Sum_probs=52.2
Q ss_pred CeEEEEccCC-------CchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCcceEE
Q 021158 25 PAVLFIHGFP-------ELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFL 97 (316)
Q Consensus 25 p~il~~HG~~-------~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 97 (316)
..||++||=. .+.+.|..+++.+.++| -+..+|.-..|..+. .++-+..++.+++.. +-.+
T Consensus 172 ~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~-lip~~D~AYQGF~~G--------leeDa~~lR~~a~~~---~~~l 239 (396)
T COG1448 172 GSVVLLHGCCHNPTGIDPTEEQWQELADLIKERG-LIPFFDIAYQGFADG--------LEEDAYALRLFAEVG---PELL 239 (396)
T ss_pred CCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcC-Ceeeeehhhhhhccc--------hHHHHHHHHHHHHhC---CcEE
Confidence 3699999743 35678999999999886 466678776664432 333444444444432 2377
Q ss_pred EEecHHHHHHHHHHhhchhHHhhhhhcc
Q 021158 98 VGHDWGALIAWYFCLFRPDRVKALVNMS 125 (316)
Q Consensus 98 ~G~S~Gg~~a~~~a~~~p~~v~~~il~~ 125 (316)
+..|+.=.+++ |.+||.++++++
T Consensus 240 va~S~SKnfgL-----YgERVGa~~vva 262 (396)
T COG1448 240 VASSFSKNFGL-----YGERVGALSVVA 262 (396)
T ss_pred EEehhhhhhhh-----hhhccceeEEEe
Confidence 77776555444 455666665554
No 312
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=51.13 E-value=19 Score=31.57 Aligned_cols=49 Identities=18% Similarity=0.282 Sum_probs=30.7
Q ss_pred hHHHHHHHHHHHHHHhCCcceEEEEe------cHHHHHHHHHHhhchhHHhhhhhccC
Q 021158 75 TALHLVGDLIGLLDKLGIHQVFLVGH------DWGALIAWYFCLFRPDRVKALVNMSV 126 (316)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~l~G~------S~Gg~~a~~~a~~~p~~v~~~il~~~ 126 (316)
....+...+.+.+.. .++++++|| |.|+.+++..-+..-.+ .+.+.++|
T Consensus 322 RaRvis~al~d~i~e--~d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp 376 (655)
T COG3887 322 RARVISTALSDIIKE--SDNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDP 376 (655)
T ss_pred HHHHHHHHHHHHHhh--cCcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECc
Confidence 344455555555555 569999999 88999998765543222 34444443
No 313
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=50.85 E-value=99 Score=22.82 Aligned_cols=87 Identities=16% Similarity=0.212 Sum_probs=49.3
Q ss_pred eEEEEccCCCchhhhHHhhh----hhhcCCceEEccCCCCCC-CCCCCC---------CCcchhHHHHHHHHHHHHHHhC
Q 021158 26 AVLFIHGFPELWYSWRNQLL----YLSSRGYRAIAPDLRGYG-DTDAPP---------SVTSYTALHLVGDLIGLLDKLG 91 (316)
Q Consensus 26 ~il~~HG~~~~~~~~~~~~~----~l~~~g~~v~~~D~~G~G-~s~~~~---------~~~~~~~~~~~~~~~~~~~~~~ 91 (316)
.||=..|.+....-|+.+++ .|.++|+.|.++...... .....- ....-..+.+.-|+..++..+.
T Consensus 5 aIiGtrGIPa~YGGfET~ve~L~~~l~~~g~~v~Vyc~~~~~~~~~~~y~gv~l~~i~~~~~g~~~si~yd~~sl~~al~ 84 (185)
T PF09314_consen 5 AIIGTRGIPARYGGFETFVEELAPRLVSKGIDVTVYCRSDYYPYKEFEYNGVRLVYIPAPKNGSAESIIYDFLSLLHALR 84 (185)
T ss_pred EEEeCCCCCcccCcHHHHHHHHHHHHhcCCceEEEEEccCCCCCCCcccCCeEEEEeCCCCCCchHHHHHHHHHHHHHHH
Confidence 35556678777666666555 455667777666554322 221110 1112235666667776666652
Q ss_pred --------CcceEEEEecHHHHHHHHHHh
Q 021158 92 --------IHQVFLVGHDWGALIAWYFCL 112 (316)
Q Consensus 92 --------~~~~~l~G~S~Gg~~a~~~a~ 112 (316)
.+=+.++|.+.|+.+....-.
T Consensus 85 ~~~~~~~~~~ii~ilg~~~g~~~~~~~r~ 113 (185)
T PF09314_consen 85 FIKQDKIKYDIILILGYGIGPFFLPFLRK 113 (185)
T ss_pred HHhhccccCCEEEEEcCCccHHHHHHHHh
Confidence 112567899988887775543
No 314
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=50.57 E-value=31 Score=29.43 Aligned_cols=42 Identities=19% Similarity=0.118 Sum_probs=24.8
Q ss_pred cCcEEEEEeCCCcccCCCCcchhcccccccccccCcccEEEEcCCCcccchh
Q 021158 249 KVPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQE 300 (316)
Q Consensus 249 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 300 (316)
...|++++|+.|++....... ...... ...+++|++|+.-+-
T Consensus 376 ~tnviFtNG~~DPW~~lgv~~---------~~~~~~-~~~~I~g~~Hc~Dl~ 417 (434)
T PF05577_consen 376 ATNVIFTNGELDPWRALGVTS---------DSSDSV-PAIVIPGGAHCSDLY 417 (434)
T ss_dssp --SEEEEEETT-CCGGGS--S----------SSSSE-EEEEETT--TTGGGS
T ss_pred CCeEEeeCCCCCCcccccCCC---------CCCCCc-ccEEECCCeeecccc
Confidence 357999999999998766321 223344 567899999976443
No 315
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=49.96 E-value=46 Score=25.02 Aligned_cols=57 Identities=21% Similarity=0.215 Sum_probs=32.6
Q ss_pred CCeEEEEccCCCchh---hhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHH
Q 021158 24 GPAVLFIHGFPELWY---SWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDK 89 (316)
Q Consensus 24 ~p~il~~HG~~~~~~---~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~ 89 (316)
..+|+++||-.+..- ......+.|.+.|.+|-.-.++|.|.+- ..+..+++.++++.
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i---------~~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEI---------SPEELRDLREFLEK 214 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS-----------HHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCC---------CHHHHHHHHHHHhh
Confidence 357999999876542 2345667788887777666666655432 23455566666553
No 316
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=49.42 E-value=92 Score=26.10 Aligned_cols=38 Identities=16% Similarity=0.160 Sum_probs=28.4
Q ss_pred EEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCC
Q 021158 27 VLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTD 66 (316)
Q Consensus 27 il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~ 66 (316)
|||+|...- ..|+.+++.|.++|+.|..+-..+.+...
T Consensus 2 il~~~~~~p--~~~~~la~~L~~~G~~v~~~~~~~~~~~~ 39 (396)
T cd03818 2 ILFVHQNFP--GQFRHLAPALAAQGHEVVFLTEPNAAPPP 39 (396)
T ss_pred EEEECCCCc--hhHHHHHHHHHHCCCEEEEEecCCCCCCC
Confidence 788887533 34788999999999999888776655433
No 317
>PF14359 DUF4406: Domain of unknown function (DUF4406)
Probab=49.40 E-value=67 Score=20.42 Aligned_cols=68 Identities=15% Similarity=0.282 Sum_probs=46.3
Q ss_pred hhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCcceEEE-E--ecHHHHHHHHHHhh
Q 021158 37 WYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLV-G--HDWGALIAWYFCLF 113 (316)
Q Consensus 37 ~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-G--~S~Gg~~a~~~a~~ 113 (316)
...|...+..|.+.|+.|+.+-.-+. + ...+++++.+.-..++. ..+.++++ | .|-|+.+=..+|.+
T Consensus 15 ~~~f~~~a~~L~~~G~~vvnPa~~~~-----~---~~~~~~~ym~~~l~~L~--~cD~i~~l~gWe~S~GA~~E~~~A~~ 84 (92)
T PF14359_consen 15 RPAFNAAAKRLRAKGYEVVNPAELGI-----P---EGLSWEEYMRICLAMLS--DCDAIYMLPGWENSRGARLEHELAKK 84 (92)
T ss_pred HHHHHHHHHHHHHCCCEEeCchhhCC-----C---CCCCHHHHHHHHHHHHH--hCCEEEEcCCcccCcchHHHHHHHHH
Confidence 45577778899999999998765511 1 23456666665556555 34567665 4 79999988888876
Q ss_pred c
Q 021158 114 R 114 (316)
Q Consensus 114 ~ 114 (316)
.
T Consensus 85 l 85 (92)
T PF14359_consen 85 L 85 (92)
T ss_pred C
Confidence 4
No 318
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=49.16 E-value=14 Score=26.28 Aligned_cols=49 Identities=27% Similarity=0.327 Sum_probs=27.8
Q ss_pred cCCCCCCCCCCCC-CCcchhHHHHHHHH----HHHHHHhC----CcceEEEEecHHHH
Q 021158 57 PDLRGYGDTDAPP-SVTSYTALHLVGDL----IGLLDKLG----IHQVFLVGHDWGAL 105 (316)
Q Consensus 57 ~D~~G~G~s~~~~-~~~~~~~~~~~~~~----~~~~~~~~----~~~~~l~G~S~Gg~ 105 (316)
+-+-|||...... ....++..+++.-+ ..+.+..+ .++|.|+|.|++..
T Consensus 59 w~lVGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 59 WQLVGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EEEE--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred EEEEEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 3445788772211 12456788888888 44444442 34799999999987
No 319
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=48.85 E-value=42 Score=30.34 Aligned_cols=43 Identities=16% Similarity=0.055 Sum_probs=30.3
Q ss_pred CCeEEEEccCCCc---hhhhHHhhhhhhcCCceEEccCCCCCCCCC
Q 021158 24 GPAVLFIHGFPEL---WYSWRNQLLYLSSRGYRAIAPDLRGYGDTD 66 (316)
Q Consensus 24 ~p~il~~HG~~~~---~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~ 66 (316)
..+++++||.... ...-..+...|..+|..|-..=+|+-|.+-
T Consensus 551 ~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~ 596 (620)
T COG1506 551 KTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGF 596 (620)
T ss_pred CCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCC
Confidence 4689999998753 334456778888888887777776555443
No 320
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=47.87 E-value=35 Score=27.33 Aligned_cols=90 Identities=16% Similarity=0.125 Sum_probs=50.1
Q ss_pred HhhhhhhcCCceEEccCCCCCCCCCCCCCCc-chhHHHHH--HHHHHHHHHhCCcce------EEEEecH----------
Q 021158 42 NQLLYLSSRGYRAIAPDLRGYGDTDAPPSVT-SYTALHLV--GDLIGLLDKLGIHQV------FLVGHDW---------- 102 (316)
Q Consensus 42 ~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~------~l~G~S~---------- 102 (316)
..+..|.+.||.|+.+|---.|......... .+-..|+. +-+.+++++...+.| ..+|.|+
T Consensus 15 Htv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~~VgESv~~Pl~Yy~NN 94 (329)
T COG1087 15 HTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFAASISVGESVQNPLKYYDNN 94 (329)
T ss_pred HHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhcCCCEEEECccccccchhhhCHHHHHhhc
Confidence 4566777899999999988766554332110 11111111 245566666555532 3567775
Q ss_pred -HHHHHHHHHhhchhHHhhhhhccCCCCCCC
Q 021158 103 -GALIAWYFCLFRPDRVKALVNMSVPFPPRN 132 (316)
Q Consensus 103 -Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~ 132 (316)
+|.+.+.-+.+.- .|+.+|+.++......
T Consensus 95 v~gTl~Ll~am~~~-gv~~~vFSStAavYG~ 124 (329)
T COG1087 95 VVGTLNLIEAMLQT-GVKKFIFSSTAAVYGE 124 (329)
T ss_pred hHhHHHHHHHHHHh-CCCEEEEecchhhcCC
Confidence 3444443333322 3888888877655433
No 321
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=47.47 E-value=52 Score=23.26 Aligned_cols=55 Identities=24% Similarity=0.198 Sum_probs=33.3
Q ss_pred hhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCcceEEEEecHHHHHHHHH
Q 021158 44 LLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYF 110 (316)
Q Consensus 44 ~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~ 110 (316)
...+.+ |-.|++.|.+|- .++-+++++.+..+- ..|.+=.+++|.|.|=.-++..
T Consensus 61 l~~i~~-~~~vi~Ld~~Gk----------~~sSe~fA~~l~~~~-~~G~~i~f~IGG~~Gl~~~~~~ 115 (155)
T COG1576 61 LAAIPK-GSYVVLLDIRGK----------ALSSEEFADFLERLR-DDGRDISFLIGGADGLSEAVKA 115 (155)
T ss_pred HHhcCC-CCeEEEEecCCC----------cCChHHHHHHHHHHH-hcCCeEEEEEeCcccCCHHHHH
Confidence 344444 578999999873 445566666555543 3352334578999886544443
No 322
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=47.35 E-value=80 Score=23.59 Aligned_cols=32 Identities=25% Similarity=0.145 Sum_probs=22.3
Q ss_pred EEEEccCCCchhhhHHhhhhhhcCCceEEccCCC
Q 021158 27 VLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLR 60 (316)
Q Consensus 27 il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~ 60 (316)
+..+-|. ++..=+.++..|++.|++|.+.|+.
T Consensus 16 ~~~vtGg--~sGIGrAia~~la~~Garv~v~dl~ 47 (256)
T KOG1200|consen 16 VAAVTGG--SSGIGRAIAQLLAKKGARVAVADLD 47 (256)
T ss_pred eeEEecC--CchHHHHHHHHHHhcCcEEEEeecc
Confidence 4444443 3344567788999999999998864
No 323
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=47.29 E-value=23 Score=25.51 Aligned_cols=34 Identities=26% Similarity=0.256 Sum_probs=27.7
Q ss_pred CCCeEEEEccCCCchhhhHHhhhhhhcCCceEEc
Q 021158 23 TGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIA 56 (316)
Q Consensus 23 ~~p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~ 56 (316)
..+.|+++-|-|.+...=...+++|.++|+.|.+
T Consensus 24 ~~~~v~il~G~GnNGgDgl~~AR~L~~~G~~V~v 57 (169)
T PF03853_consen 24 KGPRVLILCGPGNNGGDGLVAARHLANRGYNVTV 57 (169)
T ss_dssp TT-EEEEEE-SSHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCeEEEEECCCCChHHHHHHHHHHHHCCCeEEE
Confidence 4678999999998887777888999999999887
No 324
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=46.16 E-value=1e+02 Score=22.92 Aligned_cols=63 Identities=24% Similarity=0.210 Sum_probs=38.9
Q ss_pred HHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCcceEEEEecHHHHHHHHHHhh
Q 021158 41 RNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLF 113 (316)
Q Consensus 41 ~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 113 (316)
....+.+.++++.++.+|-+|... .-.+..+.+..+++......++++=-+..+.-.+..+..
T Consensus 73 ~~~l~~~~~~~~D~vlIDT~Gr~~----------~d~~~~~el~~~~~~~~~~~~~LVlsa~~~~~~~~~~~~ 135 (196)
T PF00448_consen 73 REALEKFRKKGYDLVLIDTAGRSP----------RDEELLEELKKLLEALNPDEVHLVLSATMGQEDLEQALA 135 (196)
T ss_dssp HHHHHHHHHTTSSEEEEEE-SSSS----------THHHHHHHHHHHHHHHSSSEEEEEEEGGGGGHHHHHHHH
T ss_pred HHHHHHHhhcCCCEEEEecCCcch----------hhHHHHHHHHHHhhhcCCccceEEEecccChHHHHHHHH
Confidence 334455566679999999987642 234456677777777766666666555555555544443
No 325
>cd06292 PBP1_LacI_like_10 Ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. This group includes the ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.
Probab=46.08 E-value=1e+02 Score=23.86 Aligned_cols=75 Identities=16% Similarity=0.083 Sum_probs=41.1
Q ss_pred eEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCcceEEEEecH
Q 021158 26 AVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDW 102 (316)
Q Consensus 26 ~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 102 (316)
.||+++............+..+.+.|..|+.+|..-.+....+. -..+.......+.+.+-..|.+++.+++...
T Consensus 58 giIi~~~~~~~~~~~~~~i~~~~~~~ipvV~i~~~~~~~~~~~~--V~~d~~~~~~~~~~~l~~~g~~~i~~i~~~~ 132 (273)
T cd06292 58 GVVFISSLHADTHADHSHYERLAERGLPVVLVNGRAPPPLKVPH--VSTDDALAMRLAVRHLVALGHRRIGFASGPG 132 (273)
T ss_pred EEEEeCCCCCcccchhHHHHHHHhCCCCEEEEcCCCCCCCCCCE--EEECcHHHHHHHHHHHHHCCCceEEEEeCCc
Confidence 45555443333333444566677778999999864333111111 2234444555555555556888888886543
No 326
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=46.07 E-value=20 Score=28.11 Aligned_cols=15 Identities=27% Similarity=0.729 Sum_probs=12.3
Q ss_pred CCcceEEEEecHHHH
Q 021158 91 GIHQVFLVGHDWGAL 105 (316)
Q Consensus 91 ~~~~~~l~G~S~Gg~ 105 (316)
+.+.|+++|||+|..
T Consensus 233 ~i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEV 247 (270)
T ss_pred CCCEEEEEeCCCchh
Confidence 446899999999974
No 327
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=46.00 E-value=45 Score=23.58 Aligned_cols=26 Identities=27% Similarity=0.385 Sum_probs=19.4
Q ss_pred HHHHhCC--cceEEEEecHHHHHHHHHH
Q 021158 86 LLDKLGI--HQVFLVGHDWGALIAWYFC 111 (316)
Q Consensus 86 ~~~~~~~--~~~~l~G~S~Gg~~a~~~a 111 (316)
.+.+.+. ..-.+.|.|.|+.++..++
T Consensus 19 ~l~~~~~~~~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 19 ALAERGLLDCVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred HHHHhCCccCCCEEEEEcHHHHHHHHHh
Confidence 3344444 4557889999999999998
No 328
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=45.51 E-value=59 Score=25.77 Aligned_cols=81 Identities=11% Similarity=0.059 Sum_probs=45.5
Q ss_pred eEEEEccCCCchh-hhHHhhhhhhcCCc-------eEEccCCCCCCCCCCCCCCcchhHHHHH--------HHHHHHHHH
Q 021158 26 AVLFIHGFPELWY-SWRNQLLYLSSRGY-------RAIAPDLRGYGDTDAPPSVTSYTALHLV--------GDLIGLLDK 89 (316)
Q Consensus 26 ~il~~HG~~~~~~-~~~~~~~~l~~~g~-------~v~~~D~~G~G~s~~~~~~~~~~~~~~~--------~~~~~~~~~ 89 (316)
.-|++.|.|...- .-+-+...+.+.|. +++.+|..|-=..++.. -...-..++ .++.+.++.
T Consensus 26 ~~iv~~GAGsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~--l~~~~~~~a~~~~~~~~~~L~e~i~~ 103 (279)
T cd05312 26 QRILFLGAGSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKD--LTPFKKPFARKDEEKEGKSLLEVVKA 103 (279)
T ss_pred cEEEEECcCHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCc--chHHHHHHHhhcCcccCCCHHHHHHh
Confidence 4556667765443 33444555555566 89999998864433321 011111122 256666665
Q ss_pred hCCcceEEEEecH-HHHHHHHH
Q 021158 90 LGIHQVFLVGHDW-GALIAWYF 110 (316)
Q Consensus 90 ~~~~~~~l~G~S~-Gg~~a~~~ 110 (316)
++ +-+|+|.|- ||.+.-.+
T Consensus 104 v~--ptvlIG~S~~~g~ft~ev 123 (279)
T cd05312 104 VK--PTVLIGLSGVGGAFTEEV 123 (279)
T ss_pred cC--CCEEEEeCCCCCCCCHHH
Confidence 54 668999994 67555443
No 329
>COG4667 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=44.95 E-value=58 Score=25.54 Aligned_cols=40 Identities=20% Similarity=0.106 Sum_probs=27.8
Q ss_pred HHHHHHHhCCcceE-EEEecHHHHHHHHHHhhchhHHhhhhh
Q 021158 83 LIGLLDKLGIHQVF-LVGHDWGALIAWYFCLFRPDRVKALVN 123 (316)
Q Consensus 83 ~~~~~~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~v~~~il 123 (316)
+.+++..-. .++. ++|.|+|+.-+..+..+.+.+-++++.
T Consensus 30 LD~fl~a~~-~~f~~~~GvSAGA~n~~aYls~Q~gra~~~~~ 70 (292)
T COG4667 30 LDEFLRANF-NPFDLVVGVSAGALNLVAYLSKQRGRARRVIV 70 (292)
T ss_pred HHHHHHhcc-CCcCeeeeecHhHHhHHHHhhcCCchHHHHHH
Confidence 334443322 3444 689999999999999988877666664
No 330
>TIGR01626 ytfJ_HI0045 conserved hypothetical protein YtfJ-family, TIGR01626. This model represents sequences from gamma proteobacteria that are related to the E. coli protein, YtfJ.
Probab=44.68 E-value=40 Score=24.77 Aligned_cols=51 Identities=10% Similarity=0.099 Sum_probs=37.0
Q ss_pred EEEeCCeeEEEEEeCC----CCeEE--EEccCCCchhhhHHhhhhhhcCCceE------EccC
Q 021158 8 TVATNGINMHVASIGT----GPAVL--FIHGFPELWYSWRNQLLYLSSRGYRA------IAPD 58 (316)
Q Consensus 8 ~~~~~g~~l~~~~~g~----~p~il--~~HG~~~~~~~~~~~~~~l~~~g~~v------~~~D 58 (316)
.+.++|..+.|..+.+ |.+.| ++-|+....+.-.++...|.++|+.+ +.++
T Consensus 39 e~~~~~~~~~y~~~~~~~l~GKV~lvn~~Aswc~~c~~e~P~l~~l~~~~~~~~~y~~t~~IN 101 (184)
T TIGR01626 39 EIVLSGKDTVYQPWGSAELAGKVRVVHHIAGRTSAKEXNASLIDAIKAAKFPPVKYQTTTIIN 101 (184)
T ss_pred eEEEcCCcccceeccHHHcCCCEEEEEEEecCCChhhccchHHHHHHHcCCCcccccceEEEE
Confidence 4556788889988864 55433 44466677778889999998888887 6665
No 331
>cd03145 GAT1_cyanophycinase Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. This group contains proteins similar to the extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Cyanophycinase is believed to be a serine-type exopeptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow.
Probab=44.15 E-value=1.1e+02 Score=23.12 Aligned_cols=38 Identities=13% Similarity=-0.005 Sum_probs=21.8
Q ss_pred CCCeEEEEccCCCchhh-hHHhhhhhhcCCce-EEccCCC
Q 021158 23 TGPAVLFIHGFPELWYS-WRNQLLYLSSRGYR-AIAPDLR 60 (316)
Q Consensus 23 ~~p~il~~HG~~~~~~~-~~~~~~~l~~~g~~-v~~~D~~ 60 (316)
.++.|+++.-.+..... ...+...+.+.|.. +..++..
T Consensus 28 ~~~~i~~iptA~~~~~~~~~~~~~~~~~lG~~~v~~~~~~ 67 (217)
T cd03145 28 AGARIVVIPAASEEPAEVGEEYRDVFERLGAREVEVLVID 67 (217)
T ss_pred CCCcEEEEeCCCcChhHHHHHHHHHHHHcCCceeEEeccC
Confidence 35778888766554333 34455566666763 4555544
No 332
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=44.06 E-value=20 Score=34.65 Aligned_cols=26 Identities=42% Similarity=0.463 Sum_probs=20.3
Q ss_pred HHHHHHHHHhCCcceEEEEecHHHHH
Q 021158 81 GDLIGLLDKLGIHQVFLVGHDWGALI 106 (316)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~G~S~Gg~~ 106 (316)
-.+.+++..+|+.|-.++|||.|-+-
T Consensus 570 iaLtDlLs~lgi~PDGIvGHS~GElg 595 (2376)
T KOG1202|consen 570 IALTDLLSCLGIRPDGIVGHSLGELG 595 (2376)
T ss_pred HHHHHHHHhcCCCCCcccccccchhc
Confidence 34556777889999999999998543
No 333
>PF06289 FlbD: Flagellar protein (FlbD); InterPro: IPR009384 This family consists of several bacterial FlbD flagellar proteins. The exact function of this family is unknown [].
Probab=42.64 E-value=57 Score=18.80 Aligned_cols=35 Identities=26% Similarity=0.414 Sum_probs=26.8
Q ss_pred ccccCcccEEEEcCCCcccchhhHHHHHHHHHHHHHh
Q 021158 279 KYVPYLQDVVVMEGVAHFINQEKAEEVGAHIYEFIKK 315 (316)
Q Consensus 279 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 315 (316)
+..|+ +.+.+-++.++.-.|.++++.+.+.+|-++
T Consensus 23 e~~PD--TvItL~~G~k~vV~Es~~eVi~ki~~y~~~ 57 (60)
T PF06289_consen 23 EETPD--TVITLTNGKKYVVKESVEEVIEKIIEYRRK 57 (60)
T ss_pred EEcCC--eEEEEeCCCEEEEECCHHHHHHHHHHHHHh
Confidence 44566 455566657788889999999999999765
No 334
>TIGR02260 benz_CoA_red_B benzoyl-CoA reductase, bcr type, subunit B. This model describes B, or beta, subunit of the bcr type of benzoyl-CoA reductase, a 4-subunit enzyme. Many aromatic compounds are metabolized by way of benzoyl-CoA.
Probab=42.53 E-value=1.9e+02 Score=24.76 Aligned_cols=39 Identities=18% Similarity=0.221 Sum_probs=28.2
Q ss_pred CCeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCC
Q 021158 24 GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYG 63 (316)
Q Consensus 24 ~p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G 63 (316)
..+-|++||.+.... ...+.+.+.+.|..|++-++..++
T Consensus 266 e~~Ril~~G~P~~~~-~~~~~k~~ee~Ga~VV~~~~~~~~ 304 (413)
T TIGR02260 266 EKYRLVVEGPPNWTN-FREFWKLFYDEGAVVVASSYTKVG 304 (413)
T ss_pred cceEEEEECCCcchh-HHHHHHHHHHCCCEEEEEeccccc
Confidence 467999999887654 334555666889999999877553
No 335
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=42.04 E-value=23 Score=26.90 Aligned_cols=31 Identities=19% Similarity=0.401 Sum_probs=22.1
Q ss_pred CeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCC
Q 021158 25 PAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLR 60 (316)
Q Consensus 25 p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~ 60 (316)
+.=||++|=|.+.+ +..|+++||.|+.+|+-
T Consensus 38 ~~rvLvPgCG~g~D-----~~~La~~G~~VvGvDls 68 (218)
T PF05724_consen 38 GGRVLVPGCGKGYD-----MLWLAEQGHDVVGVDLS 68 (218)
T ss_dssp SEEEEETTTTTSCH-----HHHHHHTTEEEEEEES-
T ss_pred CCeEEEeCCCChHH-----HHHHHHCCCeEEEEecC
Confidence 34677787776644 55677889999999963
No 336
>PRK15219 carbonic anhydrase; Provisional
Probab=40.59 E-value=47 Score=25.77 Aligned_cols=34 Identities=18% Similarity=0.165 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHhCCcceEEEEecHHHHHHHHHH
Q 021158 78 HLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFC 111 (316)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a 111 (316)
+....+...+..++.+.|+++|||-=|.+...+.
T Consensus 128 ~~~~slEyAv~~L~v~~IvVlGHt~CGav~Aa~~ 161 (245)
T PRK15219 128 DLLGSMEFACAVAGAKVVLVMGHTACGAVKGAID 161 (245)
T ss_pred chhhHHHHHHHHcCCCEEEEecCCcchHHHHHHh
Confidence 3556788888899999999999997666655544
No 337
>cd00006 PTS_IIA_man PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. IIA subunits receive phosphoryl groups from HPr and transfer them to IIB subunits, which in turn phosphorylate the substrate.
Probab=40.50 E-value=1.1e+02 Score=20.48 Aligned_cols=70 Identities=14% Similarity=0.118 Sum_probs=42.5
Q ss_pred eEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCC-cceEEEEecHHH
Q 021158 26 AVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGI-HQVFLVGHDWGA 104 (316)
Q Consensus 26 ~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~G~S~Gg 104 (316)
.||.-|| .-+......+..+....-.+.+++.. ...+.+++.+.+.+.++..+. +.++++-==+||
T Consensus 3 ili~sHG--~~A~gi~~~~~~i~G~~~~i~~~~~~-----------~~~~~~~~~~~i~~~i~~~~~~~~viil~Dl~GG 69 (122)
T cd00006 3 IIIATHG--GFASGLLNSAEMILGEQENVEAIDFP-----------PGESPDDLLEKIKAALAELDSGEGVLILTDLFGG 69 (122)
T ss_pred EEEEcCH--HHHHHHHHHHHHhcCCCCCeEEEEeC-----------CCCCHHHHHHHHHHHHHHhCCCCcEEEEEeCCCC
Confidence 5788898 33344555555554332466676655 234677788888888888764 355555444466
Q ss_pred HHHH
Q 021158 105 LIAW 108 (316)
Q Consensus 105 ~~a~ 108 (316)
....
T Consensus 70 Sp~n 73 (122)
T cd00006 70 SPNN 73 (122)
T ss_pred CHHH
Confidence 5543
No 338
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=40.43 E-value=77 Score=24.71 Aligned_cols=21 Identities=24% Similarity=-0.020 Sum_probs=17.9
Q ss_pred eEEEEecHHHHHHHHHHhhch
Q 021158 95 VFLVGHDWGALIAWYFCLFRP 115 (316)
Q Consensus 95 ~~l~G~S~Gg~~a~~~a~~~p 115 (316)
-.+.|.|.|+.++..++...+
T Consensus 38 ~~i~G~SAGAl~aa~~a~g~~ 58 (249)
T cd07220 38 RKIYGASAGALTATALVTGVC 58 (249)
T ss_pred CeEEEEcHHHHHHHHHHcCCC
Confidence 458899999999999998654
No 339
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=39.94 E-value=25 Score=26.83 Aligned_cols=29 Identities=24% Similarity=0.284 Sum_probs=19.9
Q ss_pred EEEEccCCCchhhhHHhhhhhhcCCceEEccCCC
Q 021158 27 VLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLR 60 (316)
Q Consensus 27 il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~ 60 (316)
=||++|=|-+.+ +..|+++||.|+.+|+-
T Consensus 46 rvLvPgCGkg~D-----~~~LA~~G~~V~GvDlS 74 (226)
T PRK13256 46 VCLIPMCGCSID-----MLFFLSKGVKVIGIELS 74 (226)
T ss_pred eEEEeCCCChHH-----HHHHHhCCCcEEEEecC
Confidence 455555554432 45678899999999974
No 340
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=39.92 E-value=44 Score=27.02 Aligned_cols=22 Identities=27% Similarity=0.404 Sum_probs=18.9
Q ss_pred CCcceEEEEecHHHHHHHHHHh
Q 021158 91 GIHQVFLVGHDWGALIAWYFCL 112 (316)
Q Consensus 91 ~~~~~~l~G~S~Gg~~a~~~a~ 112 (316)
+.++..+.|||+|=.-|+.++.
T Consensus 83 ~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCCceeecccHhHHHHHHHcc
Confidence 4678899999999999988776
No 341
>PRK09273 hypothetical protein; Provisional
Probab=39.91 E-value=1.6e+02 Score=22.20 Aligned_cols=71 Identities=14% Similarity=0.009 Sum_probs=37.8
Q ss_pred chhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCcceE-EEEecHHHHHHHHHHhhc
Q 021158 36 LWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVF-LVGHDWGALIAWYFCLFR 114 (316)
Q Consensus 36 ~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~G~S~Gg~~a~~~a~~~ 114 (316)
+...+..+..+|.+.||.|+-+-. ..... ...++-+++..+...+..-..+..+ +-|...|..+ .|.++
T Consensus 15 n~~i~~~L~~~L~~~G~eV~D~G~-----~~~~~--~s~dYpd~a~~vA~~V~~g~~d~GIliCGTGiG~si---AANK~ 84 (211)
T PRK09273 15 NAIIYEALKKVADPKGHEVFNYGM-----YDEED--HQLTYVQNGIMASILLNSKAVDFVVTGCGTGQGAML---ALNSF 84 (211)
T ss_pred hHHHHHHHHHHHHHCCCEEEEeCC-----CCCCC--CCCChHHHHHHHHHHHHcCCCCEEEEEcCcHHHHHH---HHhcC
Confidence 344678888999999998854332 11111 1345666666666666543333322 2344444433 34455
Q ss_pred hh
Q 021158 115 PD 116 (316)
Q Consensus 115 p~ 116 (316)
|.
T Consensus 85 pG 86 (211)
T PRK09273 85 PG 86 (211)
T ss_pred CC
Confidence 54
No 342
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=39.41 E-value=76 Score=29.29 Aligned_cols=31 Identities=19% Similarity=0.339 Sum_probs=21.9
Q ss_pred HHHHHHH---HhCCcceEEEEecHHHHHHHHHHh
Q 021158 82 DLIGLLD---KLGIHQVFLVGHDWGALIAWYFCL 112 (316)
Q Consensus 82 ~~~~~~~---~~~~~~~~l~G~S~Gg~~a~~~a~ 112 (316)
++.+.++ ..+..--++.|.|.||.++..+|.
T Consensus 52 ~l~~~l~~~~~~~~~~d~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 52 ALLELLGAHLRLRVRVDVISGTSAGGINGVLLAY 85 (739)
T ss_pred HHHHHhhhhhccCCCCceEEeeCHHHHHHHHHHc
Confidence 4444444 334445578899999999999886
No 343
>PRK00103 rRNA large subunit methyltransferase; Provisional
Probab=39.01 E-value=80 Score=22.53 Aligned_cols=50 Identities=26% Similarity=0.266 Sum_probs=29.5
Q ss_pred hhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCcceEEEEecHHH
Q 021158 44 LLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWGA 104 (316)
Q Consensus 44 ~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg 104 (316)
...+... -.++++|-+| ...+-.++++.+......-..+-++++|-+.|=
T Consensus 61 l~~l~~~-~~~i~LDe~G----------k~~sS~~fA~~l~~~~~~g~~~i~F~IGGa~G~ 110 (157)
T PRK00103 61 LAALPKG-ARVIALDERG----------KQLSSEEFAQELERWRDDGRSDVAFVIGGADGL 110 (157)
T ss_pred HhhCCCC-CEEEEEcCCC----------CcCCHHHHHHHHHHHHhcCCccEEEEEcCcccc
Confidence 3444433 4688888876 345666677777665332222345678888774
No 344
>PRK09936 hypothetical protein; Provisional
Probab=38.04 E-value=99 Score=24.66 Aligned_cols=51 Identities=16% Similarity=0.287 Sum_probs=37.4
Q ss_pred chhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCC
Q 021158 36 LWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGI 92 (316)
Q Consensus 36 ~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (316)
+...|+.+.+.+...|++.+.+-+-++|.|+... .+-+...+.+.....|.
T Consensus 36 ~~~qWq~~~~~~~~~G~~tLivQWt~yG~~~fg~------~~g~La~~l~~A~~~Gl 86 (296)
T PRK09936 36 TDTQWQGLWSQLRLQGFDTLVVQWTRYGDADFGG------QRGWLAKRLAAAQQAGL 86 (296)
T ss_pred CHHHHHHHHHHHHHcCCcEEEEEeeeccCCCccc------chHHHHHHHHHHHHcCC
Confidence 5567999999999999999999999999885433 24444555555555454
No 345
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=37.76 E-value=2.3e+02 Score=23.23 Aligned_cols=89 Identities=12% Similarity=0.019 Sum_probs=47.1
Q ss_pred CeEEEEccCC----Cch-hhhHHhhhhhhc-CCceEEccCCCCCCCCCCCCC--------------CcchhHHHHHHHH-
Q 021158 25 PAVLFIHGFP----ELW-YSWRNQLLYLSS-RGYRAIAPDLRGYGDTDAPPS--------------VTSYTALHLVGDL- 83 (316)
Q Consensus 25 p~il~~HG~~----~~~-~~~~~~~~~l~~-~g~~v~~~D~~G~G~s~~~~~--------------~~~~~~~~~~~~~- 83 (316)
..|+++-|.. ... ..--.+...|.. .+.+++++=.+|.|.-..... ........-+...
T Consensus 32 ~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~~AY 111 (423)
T COG3673 32 RLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIREAY 111 (423)
T ss_pred eEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHHHHH
Confidence 4677777742 111 122233344443 467788877788875532210 0011112222222
Q ss_pred HHHHHHh-CCcceEEEEecHHHHHHHHHHhh
Q 021158 84 IGLLDKL-GIHQVFLVGHDWGALIAWYFCLF 113 (316)
Q Consensus 84 ~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~ 113 (316)
.-++++. ..++|+++|+|-|+..|--+|..
T Consensus 112 rFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 112 RFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 2222222 33689999999999999877764
No 346
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A.
Probab=37.73 E-value=54 Score=22.77 Aligned_cols=44 Identities=23% Similarity=0.263 Sum_probs=28.2
Q ss_pred eEEEEccCCCchhh--hHHhhhhhhcCCceEEccCCCCCCCCCCCC
Q 021158 26 AVLFIHGFPELWYS--WRNQLLYLSSRGYRAIAPDLRGYGDTDAPP 69 (316)
Q Consensus 26 ~il~~HG~~~~~~~--~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~ 69 (316)
++|.+-|...+.-. -..++..|.++|++|.++=.-+||+.....
T Consensus 1 pvv~VvG~~~sGKTTl~~~Li~~l~~~g~~v~~ik~~~~g~~~~d~ 46 (140)
T PF03205_consen 1 PVVQVVGPKNSGKTTLIRKLINELKRRGYRVAVIKHTDHGQFEIDP 46 (140)
T ss_dssp -EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEEE-STTSTTCST
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhHcCCceEEEEEccCCCcccCC
Confidence 46777787665544 467889999999999877666676665443
No 347
>PRK14457 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=36.65 E-value=2.3e+02 Score=23.55 Aligned_cols=75 Identities=11% Similarity=0.036 Sum_probs=45.8
Q ss_pred EEEEccCCCchhhhHHhhhhhhcCC--ceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCcceEEEEecHHH
Q 021158 27 VLFIHGFPELWYSWRNQLLYLSSRG--YRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWGA 104 (316)
Q Consensus 27 il~~HG~~~~~~~~~~~~~~l~~~g--~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg 104 (316)
+++++|+..+.+....+++.+...+ .+++-++..| .+...+ ...+.++.+.++++..|+. +.+..|.|.
T Consensus 260 y~LIpGvNDs~e~a~~La~~l~~l~~~VnLIPynp~~--~~~~~~-----ps~e~i~~f~~~L~~~Gi~--vtvR~~~G~ 330 (345)
T PRK14457 260 YILLGGVNDLPEHAEELANLLRGFQSHVNLIPYNPID--EVEFQR-----PSPKRIQAFQRVLEQRGVA--VSVRASRGL 330 (345)
T ss_pred EEEECCcCCCHHHHHHHHHHHhcCCCeEEEecCCCCC--CCCCCC-----CCHHHHHHHHHHHHHCCCe--EEEeCCCCC
Confidence 6899999999998888887776532 4444444332 222211 1233445556666666654 467899887
Q ss_pred HHHHHH
Q 021158 105 LIAWYF 110 (316)
Q Consensus 105 ~~a~~~ 110 (316)
-+...+
T Consensus 331 di~aaC 336 (345)
T PRK14457 331 DANAAC 336 (345)
T ss_pred chhhcc
Confidence 665543
No 348
>PRK14729 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Provisional
Probab=36.64 E-value=2.1e+02 Score=23.17 Aligned_cols=75 Identities=15% Similarity=0.218 Sum_probs=43.2
Q ss_pred CeEEEEccCCCchhhhHHhhhhhhcCCceEEccCC----CCC--CCCCCC---------------CCCcchhHHHHHHHH
Q 021158 25 PAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDL----RGY--GDTDAP---------------PSVTSYTALHLVGDL 83 (316)
Q Consensus 25 p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~----~G~--G~s~~~---------------~~~~~~~~~~~~~~~ 83 (316)
+.||++-|-.++.-+- ++-.|++++-.++..|- +|. |...++ .....++..++.++.
T Consensus 4 ~~ii~I~GpTasGKS~--LAl~LA~~~~eIIsaDS~QvYr~ldIgTaKpt~eE~~~i~Hhlid~~~p~e~~sv~~f~~~a 81 (300)
T PRK14729 4 NKIVFIFGPTAVGKSN--ILFHFPKGKAEIINVDSIQVYKEFDIASCKPSKELRKHIKHHLVDFLEPIKEYNLGIFYKEA 81 (300)
T ss_pred CcEEEEECCCccCHHH--HHHHHHHhCCcEEeccHHHHHCCCceecCCCCHHHHcCCCeeeeeccCCCCceeHHHHHHHH
Confidence 3477888876655432 23334444347888884 222 211111 012578899999999
Q ss_pred HHHHHHhC--CcceEEEEec
Q 021158 84 IGLLDKLG--IHQVFLVGHD 101 (316)
Q Consensus 84 ~~~~~~~~--~~~~~l~G~S 101 (316)
...++.+. .+..+++|.|
T Consensus 82 ~~~i~~i~~~gk~PilvGGT 101 (300)
T PRK14729 82 LKIIKELRQQKKIPIFVGGS 101 (300)
T ss_pred HHHHHHHHHCCCCEEEEeCc
Confidence 99998762 2334666654
No 349
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=36.24 E-value=49 Score=22.21 Aligned_cols=31 Identities=16% Similarity=0.314 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHhCCcceEEEEecHHHHHHH
Q 021158 78 HLVGDLIGLLDKLGIHQVFLVGHDWGALIAW 108 (316)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~ 108 (316)
.....+...+..++.+.++++||+--|.+..
T Consensus 44 ~~~~sl~~av~~l~v~~ivV~gHt~CG~v~a 74 (119)
T cd00382 44 DVLASLEYAVEVLGVKHIIVCGHTDCGAVKA 74 (119)
T ss_pred cHHHHHHHHHHhhCCCEEEEEccCCCcHHHH
Confidence 4566777788899999999999986665554
No 350
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=35.71 E-value=1.6e+02 Score=20.72 Aligned_cols=38 Identities=24% Similarity=0.242 Sum_probs=26.5
Q ss_pred CCCCeEEE-EccCCCchhhhHHhhhhhhcCCceEEccCC
Q 021158 22 GTGPAVLF-IHGFPELWYSWRNQLLYLSSRGYRAIAPDL 59 (316)
Q Consensus 22 g~~p~il~-~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~ 59 (316)
|.+|.|++ --|..++...-.-+...|.+.||.|+..-+
T Consensus 10 g~rprvlvak~GlDgHd~gakvia~~l~d~GfeVi~~g~ 48 (143)
T COG2185 10 GARPRVLVAKLGLDGHDRGAKVIARALADAGFEVINLGL 48 (143)
T ss_pred CCCceEEEeccCccccccchHHHHHHHHhCCceEEecCC
Confidence 55665544 457666666666677889999999987543
No 351
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=35.33 E-value=74 Score=22.77 Aligned_cols=47 Identities=15% Similarity=0.082 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHHh--CCcceEEEEecHHHHHHHHHHhhchhHHhhhh
Q 021158 76 ALHLVGDLIGLLDKL--GIHQVFLVGHDWGALIAWYFCLFRPDRVKALV 122 (316)
Q Consensus 76 ~~~~~~~~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i 122 (316)
.++..+.+.++++.+ ..++|+++|-|..|..-+.++...++.+..++
T Consensus 50 ~~~~~~~l~~~L~~~~~~gk~I~~yGA~~kg~tlln~~g~~~~~I~~vv 98 (160)
T PF08484_consen 50 VEQSKAELREFLEKLKAEGKRIAGYGAGAKGNTLLNYFGLDNDLIDYVV 98 (160)
T ss_dssp HHHHHHHHHHHHHHHHHTT--EEEE---SHHHHHHHHHT--TTTS--EE
T ss_pred HHHHHHHHHHHHHHHHHcCCEEEEECcchHHHHHHHHhCCCcceeEEEE
Confidence 334444555555444 33679999999999988888876555555554
No 352
>PF08433 KTI12: Chromatin associated protein KTI12 ; InterPro: IPR013641 This is a family of chromatin associated proteins which interact with the Elongator complex, a component of the elongating form of RNA polymerase II []. The Elongator complex has histone acetyltransferase activity. ; PDB: 3ADB_B 3ADC_B 3A4M_B 3A4N_B 3AM1_A 3A4L_B 3ADD_A.
Probab=35.29 E-value=1e+02 Score=24.34 Aligned_cols=38 Identities=16% Similarity=0.274 Sum_probs=22.7
Q ss_pred eEEEEccCCCchhhh--HHhhhhhhcCCceEEccCCCCCC
Q 021158 26 AVLFIHGFPELWYSW--RNQLLYLSSRGYRAIAPDLRGYG 63 (316)
Q Consensus 26 ~il~~HG~~~~~~~~--~~~~~~l~~~g~~v~~~D~~G~G 63 (316)
++|++-|+++++-.. ..+...|.+.++.|+.++--..+
T Consensus 2 pLiil~G~P~SGKTt~a~~L~~~~~~~~~~v~~i~~~~~~ 41 (270)
T PF08433_consen 2 PLIILCGLPCSGKTTRAKELKKYLEEKGKEVVIISDDSLG 41 (270)
T ss_dssp -EEEEE--TTSSHHHHHHHHHHHHHHTT--EEEE-THHHH
T ss_pred EEEEEEcCCCCcHHHHHHHHHHHHHhcCCEEEEEcccccc
Confidence 689999999987663 45667777778888887744333
No 353
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism]
Probab=35.19 E-value=1.1e+02 Score=25.22 Aligned_cols=65 Identities=20% Similarity=0.151 Sum_probs=36.6
Q ss_pred HHhhhhhhcCCceEEccCCC------------CCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCcceEEEEecHHHHHHH
Q 021158 41 RNQLLYLSSRGYRAIAPDLR------------GYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWGALIAW 108 (316)
Q Consensus 41 ~~~~~~l~~~g~~v~~~D~~------------G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~ 108 (316)
..+++.|.++|++|..+-.- |-=-|..+- +....+..++.+.+++. .++=++|.|+|=.+..
T Consensus 191 ~nIlr~L~~rg~~vtVVP~~t~~eeIl~~~pDGiflSNGPG--DP~~~~~~i~~ik~l~~----~~iPifGICLGHQlla 264 (368)
T COG0505 191 RNILRELVKRGCRVTVVPADTSAEEILALNPDGIFLSNGPG--DPAPLDYAIETIKELLG----TKIPIFGICLGHQLLA 264 (368)
T ss_pred HHHHHHHHHCCCeEEEEcCCCCHHHHHhhCCCEEEEeCCCC--ChhHHHHHHHHHHHHhc----cCCCeEEEcHHHHHHH
Confidence 35678888888888776532 111222222 23344444444444443 3446899999987665
Q ss_pred HHH
Q 021158 109 YFC 111 (316)
Q Consensus 109 ~~a 111 (316)
.+.
T Consensus 265 lA~ 267 (368)
T COG0505 265 LAL 267 (368)
T ss_pred Hhc
Confidence 443
No 354
>COG0218 Predicted GTPase [General function prediction only]
Probab=34.96 E-value=64 Score=24.07 Aligned_cols=22 Identities=14% Similarity=0.351 Sum_probs=17.7
Q ss_pred cccCcEEEEEeCCCcccCCCCc
Q 021158 247 QIKVPVKYIVGDQDLVYNNKGT 268 (316)
Q Consensus 247 ~i~~Pvl~i~G~~D~~~~~~~~ 268 (316)
...+|++++.-.-|.+-..+..
T Consensus 133 ~~~i~~~vv~tK~DKi~~~~~~ 154 (200)
T COG0218 133 ELGIPVIVVLTKADKLKKSERN 154 (200)
T ss_pred HcCCCeEEEEEccccCChhHHH
Confidence 6688999999999998765543
No 355
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=34.89 E-value=56 Score=24.74 Aligned_cols=38 Identities=18% Similarity=0.129 Sum_probs=26.5
Q ss_pred CCCCeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCC
Q 021158 22 GTGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLR 60 (316)
Q Consensus 22 g~~p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~ 60 (316)
++.|..|++-|-... ..=..++..|++.||.|++--.+
T Consensus 4 ~~~~k~VlItgcs~G-GIG~ala~ef~~~G~~V~AtaR~ 41 (289)
T KOG1209|consen 4 QSQPKKVLITGCSSG-GIGYALAKEFARNGYLVYATARR 41 (289)
T ss_pred ccCCCeEEEeecCCc-chhHHHHHHHHhCCeEEEEEccc
Confidence 455677777764433 23356788999999999997644
No 356
>PRK05368 homoserine O-succinyltransferase; Provisional
Probab=34.87 E-value=41 Score=27.01 Aligned_cols=32 Identities=25% Similarity=0.188 Sum_probs=21.4
Q ss_pred HHHHHHHHhCCcceEEEEecHHHHHHHHHHhh
Q 021158 82 DLIGLLDKLGIHQVFLVGHDWGALIAWYFCLF 113 (316)
Q Consensus 82 ~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 113 (316)
.+.++++.+.....-++|.|+|+++++.+.--
T Consensus 123 El~~i~~w~~~~~~s~LgICwGaQa~a~algG 154 (302)
T PRK05368 123 ELKEILDWAKTHVTSTLFICWAAQAALYHLYG 154 (302)
T ss_pred HHHHHHHHHHHcCCCEEEEcHHHHHHHHHcCC
Confidence 34444444433346789999999999877654
No 357
>PLN03050 pyridoxine (pyridoxamine) 5'-phosphate oxidase; Provisional
Probab=34.65 E-value=62 Score=25.16 Aligned_cols=34 Identities=21% Similarity=0.059 Sum_probs=28.3
Q ss_pred CeEEEEccCCCchhhhHHhhhhhhcCCceEEccC
Q 021158 25 PAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPD 58 (316)
Q Consensus 25 p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D 58 (316)
..|+++.|-|.+...=.-.+++|..+|+.|.++-
T Consensus 61 ~~V~VlcG~GNNGGDGlv~AR~L~~~G~~V~v~~ 94 (246)
T PLN03050 61 PRVLLVCGPGNNGGDGLVAARHLAHFGYEVTVCY 94 (246)
T ss_pred CeEEEEECCCCCchhHHHHHHHHHHCCCeEEEEE
Confidence 4688899988888777778899999999987765
No 358
>PRK05665 amidotransferase; Provisional
Probab=34.22 E-value=84 Score=24.34 Aligned_cols=38 Identities=18% Similarity=0.082 Sum_probs=26.5
Q ss_pred hhHHHHHHHHHHHHHHhCCcceEEEEecHHHHHHHHHH
Q 021158 74 YTALHLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFC 111 (316)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a 111 (316)
++...|+..+.++++..-...+=++|.|+|..+...++
T Consensus 71 ~~~~pwi~~l~~~i~~~~~~~~PilGIC~GhQlla~Al 108 (240)
T PRK05665 71 FGTDPWIQTLKTYLLKLYERGDKLLGVCFGHQLLALLL 108 (240)
T ss_pred cccchHHHHHHHHHHHHHhcCCCEEEEeHHHHHHHHHh
Confidence 34456777777777765333455899999998876655
No 359
>PRK01261 aroD 3-dehydroquinate dehydratase; Provisional
Probab=34.21 E-value=72 Score=24.50 Aligned_cols=28 Identities=25% Similarity=0.069 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHhCCcceEEEEecHHH
Q 021158 77 LHLVGDLIGLLDKLGIHQVFLVGHDWGA 104 (316)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg 104 (316)
+|...++...++.....+.-+++.|||-
T Consensus 159 ~Dvl~~l~~~~~~~~~~~~p~i~isMG~ 186 (229)
T PRK01261 159 KKFVDDLQYILMKKDEKYKPIVFIPMGR 186 (229)
T ss_pred HHHHHHHHHHHHHHhcCCCCEEEEECCc
Confidence 3334444443333322233355777777
No 360
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=33.76 E-value=88 Score=26.63 Aligned_cols=48 Identities=10% Similarity=0.023 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHhCCcceEEEEecHHHHHHHHHHhhchhH--Hhhhhh
Q 021158 76 ALHLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDR--VKALVN 123 (316)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~--v~~~il 123 (316)
-+++.+.+.++-+.+.-+.+.++--+|=|.-|...|..+.+. +.|+|+
T Consensus 197 de~Lm~El~~Ik~~~~P~E~llVvDam~GQdA~~~A~aF~e~l~itGvIl 246 (451)
T COG0541 197 DEELMDELKEIKEVINPDETLLVVDAMIGQDAVNTAKAFNEALGITGVIL 246 (451)
T ss_pred cHHHHHHHHHHHhhcCCCeEEEEEecccchHHHHHHHHHhhhcCCceEEE
Confidence 455667777777777777899999999999999999887663 455554
No 361
>KOG2214 consensus Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=33.72 E-value=50 Score=28.49 Aligned_cols=32 Identities=19% Similarity=0.293 Sum_probs=26.6
Q ss_pred CCcceEEEEecHHHHHHHHHHhhchhHHhhhh
Q 021158 91 GIHQVFLVGHDWGALIAWYFCLFRPDRVKALV 122 (316)
Q Consensus 91 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i 122 (316)
+.=|-++-|-|+||.+|..++.+..+.++.+.
T Consensus 200 dLlP~IIsGsS~GaivAsl~~v~~~eEl~~Ll 231 (543)
T KOG2214|consen 200 DLLPNIISGSSAGAIVASLVGVRSNEELKQLL 231 (543)
T ss_pred cccchhhcCCchhHHHHHHHhhcchHHHHHHh
Confidence 44467889999999999999998877777765
No 362
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=33.56 E-value=2.5e+02 Score=23.06 Aligned_cols=34 Identities=15% Similarity=0.030 Sum_probs=24.5
Q ss_pred EEEEccCCCchhhhHHhhhhhhcCCceEEccCCC
Q 021158 27 VLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLR 60 (316)
Q Consensus 27 il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~ 60 (316)
++...|.|++-..+..++..|.+.|+.|..+-..
T Consensus 5 ~i~~~g~gG~~~~~~~la~~L~~~g~ev~vv~~~ 38 (357)
T PRK00726 5 LLAGGGTGGHVFPALALAEELKKRGWEVLYLGTA 38 (357)
T ss_pred EEEcCcchHhhhHHHHHHHHHHhCCCEEEEEECC
Confidence 4444567766666678899999989988776543
No 363
>PRK14581 hmsF outer membrane N-deacetylase; Provisional
Probab=33.52 E-value=47 Score=30.17 Aligned_cols=78 Identities=18% Similarity=0.201 Sum_probs=48.0
Q ss_pred CCCeEEEEccCCCc----------hhhhHHhhhhhhcCCceEEccCCCC---CCCCCCCCCCcchhH----HHHHHHHHH
Q 021158 23 TGPAVLFIHGFPEL----------WYSWRNQLLYLSSRGYRAIAPDLRG---YGDTDAPPSVTSYTA----LHLVGDLIG 85 (316)
Q Consensus 23 ~~p~il~~HG~~~~----------~~~~~~~~~~l~~~g~~v~~~D~~G---~G~s~~~~~~~~~~~----~~~~~~~~~ 85 (316)
++.+||+.|..... ...|...++.|.++||+++.++--= .|....+...-..|+ .+....+.-
T Consensus 47 ~~~~VLmYH~V~d~~~~~~~~~Vspe~Fe~QL~~Lk~nGY~~VSL~el~~~~~g~~~LP~KaV~LTFDDGy~sny~~AlP 126 (672)
T PRK14581 47 NTFVVIAYHDVEDDSADQRYLSVRSSALNEQFVWLRDNGYHVVSVDQILAARNGGPTLPDKAVLLTFDDGYSSFYRRVYP 126 (672)
T ss_pred CceEEEEeCcccCCCCccCccccCHHHHHHHHHHHHHCcCEEecHHHHHHHHhcCCCCCCCeEEEEEEcCCcchHHHHHH
Confidence 35689999987532 3468888999999999999997320 122222221112222 235566778
Q ss_pred HHHHhCCcc-eEEEEe
Q 021158 86 LLDKLGIHQ-VFLVGH 100 (316)
Q Consensus 86 ~~~~~~~~~-~~l~G~ 100 (316)
++++.+..- +.++|.
T Consensus 127 ILKkyg~pATfFvVg~ 142 (672)
T PRK14581 127 LLKAYKWSAVLAPVGT 142 (672)
T ss_pred HHHHcCCCEEEEEech
Confidence 888888764 345553
No 364
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=33.48 E-value=81 Score=18.85 Aligned_cols=11 Identities=27% Similarity=0.670 Sum_probs=8.4
Q ss_pred CCeEEEEccCC
Q 021158 24 GPAVLFIHGFP 34 (316)
Q Consensus 24 ~p~il~~HG~~ 34 (316)
.|.++++||..
T Consensus 31 ~~~~~lvhGga 41 (71)
T PF10686_consen 31 HPDMVLVHGGA 41 (71)
T ss_pred CCCEEEEECCC
Confidence 37788889876
No 365
>cd03379 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=33.42 E-value=65 Score=22.44 Aligned_cols=31 Identities=13% Similarity=0.318 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHhCCcceEEEEecHHHHHHH
Q 021158 78 HLVGDLIGLLDKLGIHQVFLVGHDWGALIAW 108 (316)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~ 108 (316)
+....+...+..++.+.++++||+-=|++..
T Consensus 41 ~~~~sl~~av~~l~~~~IiV~gHt~Cg~~~a 71 (142)
T cd03379 41 DAIRSLVVSVYLLGTREIIVIHHTDCGMLTF 71 (142)
T ss_pred hHHHHHHHHHHHhCCCEEEEEeecCCcceEe
Confidence 4566777888899999999999985554443
No 366
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=33.40 E-value=56 Score=23.97 Aligned_cols=33 Identities=15% Similarity=0.118 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHhCCcceEEEEecHHHHHHHHHH
Q 021158 79 LVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFC 111 (316)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a 111 (316)
....+...+..++.+.++++|||-=|.+...+.
T Consensus 67 ~~asleyAv~~L~v~~IvV~GHs~CGav~a~~~ 99 (182)
T cd00883 67 CLSVLQYAVDVLKVKHIIVCGHYGCGGVKAALT 99 (182)
T ss_pred hhhhHHHHHHhcCCCEEEEecCCCchHHHHHHc
Confidence 456777788899999999999997776665543
No 367
>cd03131 GATase1_HTS Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). HTS, the first enzyme in methionine biosynthesis in Escherichia coli, transfers a succinyl group from succinyl-CoA to homoserine forming succinyl homoserine. It has been suggested that the succinyl group of succinyl-CoA is initially transferred to an enzyme nucleophile before subsequent transfer to homoserine. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with GATase1 domains a reactive cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. It has been proposed that this cys is in the active site of the molecule. However, as succinyl has been found bound to a conserved lysine residue, this conserved cys may play a role in dimer formation. HTS acti
Probab=33.10 E-value=18 Score=26.25 Aligned_cols=36 Identities=22% Similarity=0.242 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHhCCcceEEEEecHHHHHHHHHHhhc
Q 021158 79 LVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFR 114 (316)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 114 (316)
+.+.+.++++.....-.-.+|.|||+++|+.++...
T Consensus 83 Yw~El~~i~dwa~~~v~stl~iCWgaqaal~~~yGi 118 (175)
T cd03131 83 YWEELTEILDWAKTHVTSTLFSCWAAMAALYYFYGI 118 (175)
T ss_pred hHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHcCc
Confidence 344455555555433456889999999999887543
No 368
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=32.65 E-value=2.7e+02 Score=22.58 Aligned_cols=35 Identities=14% Similarity=0.107 Sum_probs=23.8
Q ss_pred EEEEccC--CCchhhhHHhhhhhhcCCceEEccCCCC
Q 021158 27 VLFIHGF--PELWYSWRNQLLYLSSRGYRAIAPDLRG 61 (316)
Q Consensus 27 il~~HG~--~~~~~~~~~~~~~l~~~g~~v~~~D~~G 61 (316)
+++++|. |+.......+++.|.++|+.|..+...+
T Consensus 3 l~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~ 39 (360)
T cd04951 3 LYVITGLGLGGAEKQVVDLADQFVAKGHQVAIISLTG 39 (360)
T ss_pred EEEecCCCCCCHHHHHHHHHHhcccCCceEEEEEEeC
Confidence 4455554 4455556778899998898887776543
No 369
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=32.45 E-value=1.1e+02 Score=20.07 Aligned_cols=37 Identities=32% Similarity=0.267 Sum_probs=24.8
Q ss_pred EEEEccCCCchhhhHHhhhhhhcC-CceEEccCC--CCCCCC
Q 021158 27 VLFIHGFPELWYSWRNQLLYLSSR-GYRAIAPDL--RGYGDT 65 (316)
Q Consensus 27 il~~HG~~~~~~~~~~~~~~l~~~-g~~v~~~D~--~G~G~s 65 (316)
+|++.|.+++.-+. ++..|+++ |+.++..|- +-.+..
T Consensus 1 vI~I~G~~gsGKST--~a~~La~~~~~~~i~~d~~~~~~~~~ 40 (121)
T PF13207_consen 1 VIIISGPPGSGKST--LAKELAERLGFPVISMDDLIREPGWI 40 (121)
T ss_dssp EEEEEESTTSSHHH--HHHHHHHHHTCEEEEEHHHHCCGTHC
T ss_pred CEEEECCCCCCHHH--HHHHHHHHHCCeEEEecceEEecccc
Confidence 68888988876543 35556554 899888887 444433
No 370
>KOG2316 consensus Predicted ATPase (PP-loop superfamily) [General function prediction only]
Probab=32.15 E-value=52 Score=24.84 Aligned_cols=48 Identities=21% Similarity=0.100 Sum_probs=33.4
Q ss_pred CCCCCCCCCCcchhHHHHHHHHHHHHHHhCCcceEEEEecHHHHHHHH
Q 021158 62 YGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWGALIAWY 109 (316)
Q Consensus 62 ~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~ 109 (316)
.|+|....-.-..+..|-++|+-++++....+-.-+=|.|.|+.+.-.
T Consensus 73 ~g~s~nq~l~Y~~t~~DEvEDLy~ll~~VK~~~p~~eaVS~GAIlS~Y 120 (277)
T KOG2316|consen 73 RGRSINQKLQYTKTEGDEVEDLYELLKTVKEKIPDVEAVSVGAILSDY 120 (277)
T ss_pred cCcccccccccccCCCchHHHHHHHHHHHHhhCCCceeeehhhhHhHH
Confidence 355544432234466788899999999887555578899999877653
No 371
>COG1582 FlgEa Uncharacterized protein, possibly involved in motility [Cell motility and secretion]
Probab=31.72 E-value=1.1e+02 Score=17.78 Aligned_cols=35 Identities=26% Similarity=0.486 Sum_probs=26.6
Q ss_pred ccccCcccEEEEcCCCcccchhhHHHHHHHHHHHHHh
Q 021158 279 KYVPYLQDVVVMEGVAHFINQEKAEEVGAHIYEFIKK 315 (316)
Q Consensus 279 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 315 (316)
+..|+. ++..+.| --++..|.-+++.+.|.+|-++
T Consensus 23 e~~PDt-tItLinG-kkyvVkEsveEVi~kI~~y~rk 57 (67)
T COG1582 23 EAFPDT-TITLING-KKYVVKESVEEVINKIIEYRRK 57 (67)
T ss_pred hccCCc-EEEEEcC-cEEEEcccHHHHHHHHHHHHHH
Confidence 566886 6666644 6678888899999999998764
No 372
>PRK11460 putative hydrolase; Provisional
Probab=31.28 E-value=1.2e+02 Score=23.21 Aligned_cols=40 Identities=18% Similarity=0.058 Sum_probs=23.5
Q ss_pred CCeEEEEccCCCchh---hhHHhhhhhhcCCceEEccCCCCCC
Q 021158 24 GPAVLFIHGFPELWY---SWRNQLLYLSSRGYRAIAPDLRGYG 63 (316)
Q Consensus 24 ~p~il~~HG~~~~~~---~~~~~~~~l~~~g~~v~~~D~~G~G 63 (316)
.++|+++||-....- .-..+.+.|.+.|..+-..-++|-|
T Consensus 148 ~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~g 190 (232)
T PRK11460 148 ATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLG 190 (232)
T ss_pred CCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCC
Confidence 467888888766432 2344566676666655444445444
No 373
>TIGR00246 tRNA_RlmH_YbeA rRNA large subunit m3Psi methyltransferase RlmH. This protein, in the SPOUT methyltransferase family, previously designated YbeA in E. coli, was shown to be responsible for a further modification, a methylation, to a pseudouridine base in ribosomal large subunit RNA.
Probab=31.00 E-value=81 Score=22.41 Aligned_cols=46 Identities=20% Similarity=0.252 Sum_probs=27.6
Q ss_pred ceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCcceEEEEecHHHHHHH
Q 021158 52 YRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWGALIAW 108 (316)
Q Consensus 52 ~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~ 108 (316)
-.|+++|-+| ..++-.++++.+..+... +.+-++++|-+.|=.-.+
T Consensus 66 ~~~i~LDe~G----------k~~sS~~fA~~l~~~~~~-g~~i~FvIGGa~G~~~~v 111 (153)
T TIGR00246 66 AHVVTLDIPG----------KPWTTPQLADTLEKWKTD-GRDVTLLIGGPEGLSPTC 111 (153)
T ss_pred CeEEEEcCCC----------CcCCHHHHHHHHHHHhcc-CCeEEEEEcCCCcCCHHH
Confidence 4578888776 345566666666665332 323455788877754433
No 374
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=30.88 E-value=47 Score=27.37 Aligned_cols=19 Identities=32% Similarity=0.356 Sum_probs=16.2
Q ss_pred EEEEecHHHHHHHHHHhhc
Q 021158 96 FLVGHDWGALIAWYFCLFR 114 (316)
Q Consensus 96 ~l~G~S~Gg~~a~~~a~~~ 114 (316)
.+.|.|.||.+|+.++..+
T Consensus 44 lIaGTStGgIIAa~la~g~ 62 (344)
T cd07217 44 FVGGTSTGSIIAACIALGM 62 (344)
T ss_pred EEEEecHHHHHHHHHHcCC
Confidence 5779999999999998743
No 375
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=30.85 E-value=58 Score=23.55 Aligned_cols=21 Identities=29% Similarity=0.169 Sum_probs=16.8
Q ss_pred cceEEEEecHHHHHHHHHHhh
Q 021158 93 HQVFLVGHDWGALIAWYFCLF 113 (316)
Q Consensus 93 ~~~~l~G~S~Gg~~a~~~a~~ 113 (316)
..-.+.|.|.||.+|+.++..
T Consensus 27 ~~d~i~GtS~Gal~a~~~~~~ 47 (204)
T PF01734_consen 27 RFDVISGTSAGALNAALLALG 47 (204)
T ss_dssp T-SEEEEECCHHHHHHHHHTC
T ss_pred CccEEEEcChhhhhHHHHHhC
Confidence 345789999999999887765
No 376
>PRK11320 prpB 2-methylisocitrate lyase; Provisional
Probab=30.75 E-value=2.9e+02 Score=22.30 Aligned_cols=65 Identities=14% Similarity=0.160 Sum_probs=40.6
Q ss_pred cCCCchhhhHHhhhhhhcCCceEEcc-CCCC---CCCCCCCCCCcchhHHHHHHHHHHHHHHhCCcceEEEEe
Q 021158 32 GFPELWYSWRNQLLYLSSRGYRAIAP-DLRG---YGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGH 100 (316)
Q Consensus 32 G~~~~~~~~~~~~~~l~~~g~~v~~~-D~~G---~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 100 (316)
|+| +.......++.+.+.|..-+.+ |..+ +|..... .-.+.+++++-|...++.....+++|+.-
T Consensus 88 GyG-~~~~v~r~V~~~~~aGaagi~IEDq~~pK~cg~~~~~---~lv~~ee~~~kI~Aa~~a~~~~d~~IiAR 156 (292)
T PRK11320 88 GFG-GAFNIARTVKSMIKAGAAAVHIEDQVGAKRCGHRPNK---EIVSQEEMVDRIKAAVDARTDPDFVIMAR 156 (292)
T ss_pred CCC-CHHHHHHHHHHHHHcCCeEEEEecCCCccccCCCCCC---cccCHHHHHHHHHHHHHhccCCCeEEEEe
Confidence 555 6666677788888888877777 6542 2222111 24577788888888777664445665553
No 377
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=30.70 E-value=2.9e+02 Score=22.36 Aligned_cols=85 Identities=24% Similarity=0.246 Sum_probs=46.4
Q ss_pred eEEEEccCCCchhhhHHhhhhhhcC--CceEEccCCCC---------------CCCCCCCCCC--------cchhHHHHH
Q 021158 26 AVLFIHGFPELWYSWRNQLLYLSSR--GYRAIAPDLRG---------------YGDTDAPPSV--------TSYTALHLV 80 (316)
Q Consensus 26 ~il~~HG~~~~~~~~~~~~~~l~~~--g~~v~~~D~~G---------------~G~s~~~~~~--------~~~~~~~~~ 80 (316)
+=.|+-|.|.. .....+.+.|.++ ..+++++|..| .|.+..+... ...+-++..
T Consensus 170 ~d~fVagvGTG-GTitGvar~Lk~~~p~i~iv~vdP~~S~~~~~G~g~~~i~GIG~~~ip~~~~~~~iD~v~~V~d~~A~ 248 (300)
T COG0031 170 VDAFVAGVGTG-GTITGVARYLKERNPNVRIVAVDPEGSVLLSGGEGPHKIEGIGAGFVPENLDLDLIDEVIRVSDEEAI 248 (300)
T ss_pred CCEEEEeCCcc-hhHHHHHHHHHhhCCCcEEEEECCCCCcccCCCCCCcccCCCCCCcCCcccccccCceEEEECHHHHH
Confidence 33444444432 2344555666544 37888888664 2332222110 112345555
Q ss_pred HHHHHHHHHhCCcceEEEEecHHHHHHH--HHHhhch
Q 021158 81 GDLIGLLDKLGIHQVFLVGHDWGALIAW--YFCLFRP 115 (316)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~G~S~Gg~~a~--~~a~~~p 115 (316)
+..+.+.+..| .++|-|.|+.++. .+|.+.+
T Consensus 249 ~~~r~La~~eG----ilvG~SsGA~~~aa~~~a~~~~ 281 (300)
T COG0031 249 ATARRLAREEG----LLVGISSGAALAAALKLAKELP 281 (300)
T ss_pred HHHHHHHHHhC----eeecccHHHHHHHHHHHHHhcC
Confidence 66666666666 7999999996654 4455544
No 378
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=30.46 E-value=1.8e+02 Score=21.08 Aligned_cols=55 Identities=18% Similarity=0.167 Sum_probs=36.9
Q ss_pred hhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCcceEEEEecHHH
Q 021158 46 YLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWGA 104 (316)
Q Consensus 46 ~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg 104 (316)
.|.+.|+..+.+|.=+.=-.... ..-..++.+.+.++.+..+.+++.++--|.|.
T Consensus 35 ~Lk~~Gik~li~DkDNTL~~~~~----~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs 89 (168)
T PF09419_consen 35 HLKKKGIKALIFDKDNTLTPPYE----DEIPPEYAEWLNELKKQFGKDRVLIVSNSAGS 89 (168)
T ss_pred hhhhcCceEEEEcCCCCCCCCCc----CcCCHHHHHHHHHHHHHCCCCeEEEEECCCCc
Confidence 38888999999998765332222 22234455566666666666689999999864
No 379
>PF09695 YtfJ_HI0045: Bacterial protein of unknown function (YtfJ_HI0045); InterPro: IPR006513 These are sequences from gammaproteobacteria that are related to the Escherichia coli protein, YtfJ.
Probab=30.33 E-value=1e+02 Score=22.03 Aligned_cols=45 Identities=11% Similarity=0.054 Sum_probs=31.1
Q ss_pred eEEEeCCeeEEEEEeCC----CCeEEEEc--cCCCchhhhHHhhhhhhcCC
Q 021158 7 TTVATNGINMHVASIGT----GPAVLFIH--GFPELWYSWRNQLLYLSSRG 51 (316)
Q Consensus 7 ~~~~~~g~~l~~~~~g~----~p~il~~H--G~~~~~~~~~~~~~~l~~~g 51 (316)
..+.++|..+.|..|.+ |.+-|+.| |-.+..+...++.+++.++.
T Consensus 16 Gel~l~~~~~~y~~W~s~~l~GKVrviq~iAGr~sake~N~~l~~aik~a~ 66 (160)
T PF09695_consen 16 GELILNGDKISYQPWNSAQLPGKVRVIQHIAGRSSAKEMNAPLIEAIKAAK 66 (160)
T ss_pred ceEEEcCCcccccccCccccCCCEEEEEEeccCCchhHhhHHHHHHHHHcC
Confidence 34566788889998875 45555555 45566677888888887653
No 380
>COG1763 MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism]
Probab=30.21 E-value=98 Score=22.23 Aligned_cols=39 Identities=21% Similarity=0.201 Sum_probs=31.5
Q ss_pred CeEEEEccCCCchhh--hHHhhhhhhcCCceEEccCCCCCC
Q 021158 25 PAVLFIHGFPELWYS--WRNQLLYLSSRGYRAIAPDLRGYG 63 (316)
Q Consensus 25 p~il~~HG~~~~~~~--~~~~~~~l~~~g~~v~~~D~~G~G 63 (316)
+.|+=+-|+..|... ...+++.|.++||+|.++-+.+|+
T Consensus 2 ~~Il~ivG~k~SGKTTLie~lv~~L~~~G~rVa~iKH~hh~ 42 (161)
T COG1763 2 MKILGIVGYKNSGKTTLIEKLVRKLKARGYRVATVKHAHHD 42 (161)
T ss_pred CcEEEEEecCCCChhhHHHHHHHHHHhCCcEEEEEEecCCC
Confidence 356677777665543 578999999999999999999998
No 381
>PRK04148 hypothetical protein; Provisional
Probab=29.51 E-value=96 Score=21.46 Aligned_cols=21 Identities=10% Similarity=-0.037 Sum_probs=16.9
Q ss_pred cceEEEEecHHHHHHHHHHhh
Q 021158 93 HQVFLVGHDWGALIAWYFCLF 113 (316)
Q Consensus 93 ~~~~l~G~S~Gg~~a~~~a~~ 113 (316)
.++..+|...|..+|..++..
T Consensus 18 ~kileIG~GfG~~vA~~L~~~ 38 (134)
T PRK04148 18 KKIVELGIGFYFKVAKKLKES 38 (134)
T ss_pred CEEEEEEecCCHHHHHHHHHC
Confidence 568899999888888877754
No 382
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=29.46 E-value=2.1e+02 Score=22.58 Aligned_cols=61 Identities=28% Similarity=0.364 Sum_probs=39.8
Q ss_pred CeEEEEccCCCchhhhHHhhhhhhcCCc-eEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCcceEEEEec
Q 021158 25 PAVLFIHGFPELWYSWRNQLLYLSSRGY-RAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHD 101 (316)
Q Consensus 25 p~il~~HG~~~~~~~~~~~~~~l~~~g~-~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S 101 (316)
|.++|.--.+-...-.+.+.+.+.+.|. .++.+|+| -+..+++....+..+++.+.++.=+
T Consensus 96 Pivlm~Y~Npi~~~Gie~F~~~~~~~GvdGlivpDLP----------------~ee~~~~~~~~~~~gi~~I~lvaPt 157 (265)
T COG0159 96 PIVLMTYYNPIFNYGIEKFLRRAKEAGVDGLLVPDLP----------------PEESDELLKAAEKHGIDPIFLVAPT 157 (265)
T ss_pred CEEEEEeccHHHHhhHHHHHHHHHHcCCCEEEeCCCC----------------hHHHHHHHHHHHHcCCcEEEEeCCC
Confidence 5666655544444445666777777775 47888987 1234466777778888888876544
No 383
>cd02065 B12-binding_like B12 binding domain (B12-BD). Most of the members bind different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide. This domain is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins. Not all members of this family contain the conserved binding motif.
Probab=29.45 E-value=1.7e+02 Score=19.33 Aligned_cols=33 Identities=12% Similarity=-0.056 Sum_probs=24.6
Q ss_pred eEEEEccCCCchhhhHHhhhhhhcCCceEEccC
Q 021158 26 AVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPD 58 (316)
Q Consensus 26 ~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D 58 (316)
+|+++.....+......+...+.+.|+.+...+
T Consensus 2 ~l~~~~~~~~h~lg~~~~~~~l~~~G~~v~~l~ 34 (125)
T cd02065 2 VLGATVGGDVHDIGKNIVAIALRDNGFEVIDLG 34 (125)
T ss_pred EEEEEcCCchhhHHHHHHHHHHHHCCCEEEEcC
Confidence 466666666666666777788889999998874
No 384
>cd07025 Peptidase_S66 LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein. LD-carboxypeptidase (Muramoyltetrapeptide carboxypeptidase; EC 3.4.17.13; Merops family S66; initially described as Carboxypeptidase II) family also includes the microcin c7 self-immunity protein (MccF) as well as uncharacterized proteins including hypothetical proteins. LD-carboxypeptidase hydrolyzes the amide bond that links the dibasic amino acids to C-terminal D-amino acids. The physiological substrates of LD-carboxypeptidase are tetrapeptide fragments (such as UDP-MurNAc-tetrapeptides) that are produced when bacterial cell walls are degraded; they contain an L-configured residue (L-lysine or meso-diaminopimelic acid residue) as the penultimate residue and D-alanine as the ultimate residue. A possible role of LD-carboxypeptidase is in peptidoglycan recycling whereby the resulting tripeptide (precursor for murein synthesis) can be reconverted into peptidoglycan by attachment o
Probab=29.37 E-value=2.2e+02 Score=22.77 Aligned_cols=56 Identities=14% Similarity=-0.031 Sum_probs=33.9
Q ss_pred EEEccCCCch-hhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHH
Q 021158 28 LFIHGFPELW-YSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLD 88 (316)
Q Consensus 28 l~~HG~~~~~-~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~ 88 (316)
|+.+..+.+. ..+....+.|.+.||.|+..+.-...... ..-+.++-++|+.++++
T Consensus 3 iiapSs~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~-----~a~s~~~Ra~dL~~a~~ 59 (282)
T cd07025 3 IVAPSSPIDEEERLERAIARLESLGLEVVVGPHVLARDGY-----LAGTDEERAADLNAAFA 59 (282)
T ss_pred EEeCCCCCCcHHHHHHHHHHHHhCCCEEEeccchhhhcCc-----cCCCHHHHHHHHHHHhh
Confidence 3444544444 66777788999999999888765432211 12345555666655554
No 385
>PF00484 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Carbonic anhydrases (4.2.1.1 from EC) (CA) are zinc metalloenzymes which catalyze the reversible hydration of carbon dioxide. In Escherichia coli, CA (gene cynT) is involved in recycling carbon dioxide formed in the bicarbonate-dependent decomposition of cyanate by cyanase (gene cynS). By this action, it prevents the depletion of cellular bicarbonate []. In photosynthetic bacteria and plant chloroplast, CA is essential to inorganic carbon fixation []. Prokaryotic and plant chloroplast CA are structurally and evolutionary related and form a family distinct from the one which groups the many different forms of eukaryotic CA's (see IPR001148 from INTERPRO). Hypothetical proteins yadF from Escherichia coli and HI1301 from Haemophilus influenzae also belong to this family. This family also includes, YbcF and related proteins, which are inactive homologues of bacterial carbonic anhydrase.; GO: 0004089 carbonate dehydratase activity, 0008270 zinc ion binding; PDB: 1DDZ_B 3LAS_A 2W3N_A 2W3Q_A 1G5C_F 3E2A_A 3E2X_B 2A8C_A 2A8D_D 3E3F_A ....
Probab=29.33 E-value=1.3e+02 Score=21.06 Aligned_cols=36 Identities=17% Similarity=0.150 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHhCCcceEEEEecHHHHHHHHHH
Q 021158 76 ALHLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFC 111 (316)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a 111 (316)
.......+...+..++.+.++++||+-=|.+...+.
T Consensus 38 ~~~~~~sle~av~~l~v~~IiV~gHt~CGa~~~~~~ 73 (153)
T PF00484_consen 38 DDSALASLEYAVYHLGVKEIIVCGHTDCGAIKAALD 73 (153)
T ss_dssp -HHHHHHHHHHHHTST-SEEEEEEETT-HHHHHHHH
T ss_pred ccchhhheeeeeecCCCCEEEEEcCCCchHHHHHHh
Confidence 355667777888889999999999998777664433
No 386
>PRK10437 carbonic anhydrase; Provisional
Probab=29.28 E-value=86 Score=23.90 Aligned_cols=33 Identities=12% Similarity=0.065 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHhCCcceEEEEecHHHHHHHHHH
Q 021158 79 LVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFC 111 (316)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a 111 (316)
....+...+..++.+.|+++||+-=|.+...+.
T Consensus 77 ~~~~leyAV~~L~v~~IvV~GHt~CG~V~Aal~ 109 (220)
T PRK10437 77 CLSVVQYAVDVLEVEHIIICGHYGCGGVQAAVE 109 (220)
T ss_pred hHHHHHHHHHHcCCCEEEEeCCCCchHHHHHHc
Confidence 455667778889999999999997666665543
No 387
>PF14488 DUF4434: Domain of unknown function (DUF4434)
Probab=29.24 E-value=1.1e+02 Score=22.01 Aligned_cols=60 Identities=20% Similarity=0.302 Sum_probs=41.8
Q ss_pred CCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCC-----CcchhHHHHHHHHHHHHHHhCCc
Q 021158 34 PELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPS-----VTSYTALHLVGDLIGLLDKLGIH 93 (316)
Q Consensus 34 ~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 93 (316)
..+...|+...+.+.+.|+..+.+-.-|++....-+. .......++++.+.+..+..|.+
T Consensus 16 ~~~~~~W~~~~~~m~~~GidtlIlq~~~~~~~~~yps~~~~~~~~~~~~d~l~~~L~~A~~~Gmk 80 (166)
T PF14488_consen 16 NWTPAQWREEFRAMKAIGIDTLILQWTGYGGFAFYPSKLSPGGFYMPPVDLLEMILDAADKYGMK 80 (166)
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEEEeecCCcccCCccccCccccCCcccHHHHHHHHHHHcCCE
Confidence 3456789999999999999988887777766543221 11224556777777777777765
No 388
>PRK06259 succinate dehydrogenase/fumarate reductase iron-sulfur subunit; Provisional
Probab=29.01 E-value=2.5e+02 Score=24.53 Aligned_cols=72 Identities=18% Similarity=0.159 Sum_probs=41.5
Q ss_pred CCeEEEEccCCCc---hhhhHHhhhhhhcCCceEEccC-CCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCcceE
Q 021158 24 GPAVLFIHGFPEL---WYSWRNQLLYLSSRGYRAIAPD-LRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVF 96 (316)
Q Consensus 24 ~p~il~~HG~~~~---~~~~~~~~~~l~~~g~~v~~~D-~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (316)
+..+++++|=..+ .+.-......|.+.|+.+..++ ..-.|...... ...-.+...++...+.++..+.+.++
T Consensus 260 ~~~v~~f~GC~~~~~~~~~~~a~~~vL~~~G~~~~~~~~~~CCG~p~~~~-G~~~~~~~~~~~ni~~~~~~~~~~IV 335 (486)
T PRK06259 260 KLRVAFFTGCLVDYRLQEVGKDAIRVLNAHGISVIIPKNQVCCGSPLIRT-GQTDVAEELKKKNLEIFNKLDVDTVV 335 (486)
T ss_pred CeEEEEECCccccccchHHHHHHHHHHHHCCCeEecCCCCCcccHHHHhc-CCHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 4568888885433 2333455677888899998764 22333221111 12335566666777777777766543
No 389
>COG3621 Patatin [General function prediction only]
Probab=28.91 E-value=1.2e+02 Score=24.83 Aligned_cols=51 Identities=18% Similarity=0.241 Sum_probs=32.1
Q ss_pred ceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCc----ceEE-EEecHHHHHHHHHHhhch
Q 021158 52 YRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIH----QVFL-VGHDWGALIAWYFCLFRP 115 (316)
Q Consensus 52 ~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l-~G~S~Gg~~a~~~a~~~p 115 (316)
|++..+|=-|.- ..+...+...+++.... .+.+ -|.|.||.+++.+|...+
T Consensus 9 ~rIlsldGGGvr-------------G~i~lE~lr~ieqiqGkkl~e~FDl~~GTSiGgilal~La~~ks 64 (394)
T COG3621 9 YRILSLDGGGVR-------------GAILLEKLRIIEQIQGKKLCEYFDLIGGTSIGGILALGLALGKS 64 (394)
T ss_pred eeEEEecCCccc-------------cHHHHHHHHHHHHHhCCcceeeEeeecCccHHHHHHHHHhcCCC
Confidence 788887743321 13444555666664322 3444 589999999999998654
No 390
>PRK14974 cell division protein FtsY; Provisional
Probab=28.84 E-value=1.6e+02 Score=24.28 Aligned_cols=57 Identities=19% Similarity=0.113 Sum_probs=34.6
Q ss_pred hcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCcceEEEEecHHHHHHHHHHhhc
Q 021158 48 SSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFR 114 (316)
Q Consensus 48 ~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 114 (316)
...|+.++.+|-+|.... -..+.+.+..+.+....+.++++.-+.-|.-+..-+..+
T Consensus 219 ~~~~~DvVLIDTaGr~~~----------~~~lm~eL~~i~~~~~pd~~iLVl~a~~g~d~~~~a~~f 275 (336)
T PRK14974 219 KARGIDVVLIDTAGRMHT----------DANLMDELKKIVRVTKPDLVIFVGDALAGNDAVEQAREF 275 (336)
T ss_pred HhCCCCEEEEECCCccCC----------cHHHHHHHHHHHHhhCCceEEEeeccccchhHHHHHHHH
Confidence 345788999998875532 233455566666655555666776666666555555443
No 391
>PRK11613 folP dihydropteroate synthase; Provisional
Probab=28.46 E-value=3.1e+02 Score=21.98 Aligned_cols=58 Identities=19% Similarity=0.292 Sum_probs=30.5
Q ss_pred HHhhhhhhcCCce--EEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCcceEEEEecHHHHHH
Q 021158 41 RNQLLYLSSRGYR--AIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWGALIA 107 (316)
Q Consensus 41 ~~~~~~l~~~g~~--v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a 107 (316)
...+..+.+.|.. =+.+|. |.|.+.... .-.++.+.+..+ ..+ ...+++|+|-=.++.
T Consensus 166 ~~~i~~a~~~GI~~~~IilDP-GiGF~k~~~-----~n~~ll~~l~~l-~~l--g~Pilvg~SRKsfig 225 (282)
T PRK11613 166 IEQIARCEAAGIAKEKLLLDP-GFGFGKNLS-----HNYQLLARLAEF-HHF--NLPLLVGMSRKSMIG 225 (282)
T ss_pred HHHHHHHHHcCCChhhEEEeC-CCCcCCCHH-----HHHHHHHHHHHH-HhC--CCCEEEEecccHHHH
Confidence 3344556677875 667774 676543211 122233333332 233 356899999555554
No 392
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=28.33 E-value=93 Score=21.32 Aligned_cols=9 Identities=44% Similarity=1.025 Sum_probs=7.4
Q ss_pred CeEEEEccC
Q 021158 25 PAVLFIHGF 33 (316)
Q Consensus 25 p~il~~HG~ 33 (316)
..+||+||-
T Consensus 58 ~~viFvHGC 66 (150)
T COG3727 58 RCVIFVHGC 66 (150)
T ss_pred eEEEEEeee
Confidence 479999994
No 393
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=28.30 E-value=55 Score=26.11 Aligned_cols=19 Identities=32% Similarity=0.356 Sum_probs=16.7
Q ss_pred EEEEecHHHHHHHHHHhhc
Q 021158 96 FLVGHDWGALIAWYFCLFR 114 (316)
Q Consensus 96 ~l~G~S~Gg~~a~~~a~~~ 114 (316)
.+.|.|.||.+|+.++...
T Consensus 37 ~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 37 LFAGTSAGSLIALGLALGY 55 (288)
T ss_pred EEEEeCHHHHHHHHHHcCc
Confidence 5789999999999998764
No 394
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=28.29 E-value=48 Score=25.18 Aligned_cols=17 Identities=24% Similarity=0.600 Sum_probs=13.2
Q ss_pred hhhhhcCCceEEccCCC
Q 021158 44 LLYLSSRGYRAIAPDLR 60 (316)
Q Consensus 44 ~~~l~~~g~~v~~~D~~ 60 (316)
+..|+++|+.|+++|.-
T Consensus 52 a~~LA~~G~~V~avD~s 68 (218)
T PRK13255 52 MLWLAEQGHEVLGVELS 68 (218)
T ss_pred HHHHHhCCCeEEEEccC
Confidence 44566789999999963
No 395
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=28.19 E-value=1.1e+02 Score=24.72 Aligned_cols=34 Identities=15% Similarity=0.161 Sum_probs=26.0
Q ss_pred HHHHHHHHHHhCC----cceEEEEec--HHHHHHHHHHhh
Q 021158 80 VGDLIGLLDKLGI----HQVFLVGHD--WGALIAWYFCLF 113 (316)
Q Consensus 80 ~~~~~~~~~~~~~----~~~~l~G~S--~Gg~~a~~~a~~ 113 (316)
+..+.+++++.+. +++.++|.| ||..++..+..+
T Consensus 143 p~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ 182 (301)
T PRK14194 143 PSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQA 182 (301)
T ss_pred HHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHC
Confidence 3466777777654 479999986 999999988764
No 396
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=28.13 E-value=49 Score=26.66 Aligned_cols=17 Identities=29% Similarity=0.669 Sum_probs=15.1
Q ss_pred EEEEecHHHHHHHHHHh
Q 021158 96 FLVGHDWGALIAWYFCL 112 (316)
Q Consensus 96 ~l~G~S~Gg~~a~~~a~ 112 (316)
.+.|.|.||.+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 47899999999999986
No 397
>PRK07313 phosphopantothenoylcysteine decarboxylase; Validated
Probab=28.07 E-value=2.3e+02 Score=20.81 Aligned_cols=60 Identities=17% Similarity=0.165 Sum_probs=33.6
Q ss_pred CCeEEEEccCCC---chhhhHHhhhhhhcCCceEEccCCCCC---CCCCCCCCCcchhHHHHHHHHHHHH
Q 021158 24 GPAVLFIHGFPE---LWYSWRNQLLYLSSRGYRAIAPDLRGY---GDTDAPPSVTSYTALHLVGDLIGLL 87 (316)
Q Consensus 24 ~p~il~~HG~~~---~~~~~~~~~~~l~~~g~~v~~~D~~G~---G~s~~~~~~~~~~~~~~~~~~~~~~ 87 (316)
+.+||+++-... ...........|.+.|+.|+-+. +|+ |..... ...+++++++.+...+
T Consensus 113 ~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~vi~p~-~g~la~~~~g~g---~~~~~~~i~~~v~~~~ 178 (182)
T PRK07313 113 TTPKLIAPAMNTKMYENPATQRNLKTLKEDGVQEIEPK-EGLLACGDEGYG---ALADIETILETIENTL 178 (182)
T ss_pred CCCEEEEECCCHHHhcCHHHHHHHHHHHHCCCEEECCC-CCccccCCccCC---CCCCHHHHHHHHHHHh
Confidence 456777774322 22233455678888898888777 444 332211 2345666666665544
No 398
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=28.00 E-value=3e+02 Score=21.68 Aligned_cols=73 Identities=18% Similarity=0.205 Sum_probs=44.0
Q ss_pred CCeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCC-CCCCcchhHHHHHHHHHHHHHHhCCcceEE-EEec
Q 021158 24 GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDA-PPSVTSYTALHLVGDLIGLLDKLGIHQVFL-VGHD 101 (316)
Q Consensus 24 ~p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~G~S 101 (316)
+.+|++--|...+.+.|...++.+.+.|-.=+++-.+|. |.. +......++. .+..+-+..+ -+|.+ -+||
T Consensus 132 gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~l~~rG~--s~y~~~~~~~~dl~----~i~~lk~~~~-~pV~~ds~Hs 204 (260)
T TIGR01361 132 GKPVLLKRGMGNTIEEWLYAAEYILSSGNGNVILCERGI--RTFEKATRNTLDLS----AVPVLKKETH-LPIIVDPSHA 204 (260)
T ss_pred CCcEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEECCC--CCCCCCCcCCcCHH----HHHHHHHhhC-CCEEEcCCCC
Confidence 678999999999999999999999887764333333433 222 1110122222 2222223334 46777 6999
Q ss_pred HH
Q 021158 102 WG 103 (316)
Q Consensus 102 ~G 103 (316)
.|
T Consensus 205 ~G 206 (260)
T TIGR01361 205 AG 206 (260)
T ss_pred CC
Confidence 77
No 399
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=27.89 E-value=69 Score=26.35 Aligned_cols=19 Identities=21% Similarity=0.137 Sum_probs=15.7
Q ss_pred eEEEEecHHHHHHHHHHhh
Q 021158 95 VFLVGHDWGALIAWYFCLF 113 (316)
Q Consensus 95 ~~l~G~S~Gg~~a~~~a~~ 113 (316)
-.++|||+|=..|+.++..
T Consensus 126 ~~~~GHSlGE~aA~~~AG~ 144 (343)
T PLN02752 126 DVCAGLSLGEYTALVFAGA 144 (343)
T ss_pred CeeeeccHHHHHHHHHhCC
Confidence 3579999999999888754
No 400
>PF06415 iPGM_N: BPG-independent PGAM N-terminus (iPGM_N); InterPro: IPR011258 This family represents the N-terminal region of the 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (or phosphoglyceromutase or BPG-independent PGAM) protein (5.4.2.1 from EC). The family is found in conjunction with Metalloenzyme (located in the C-terminal region of the protein). ; GO: 0004619 phosphoglycerate mutase activity, 0030145 manganese ion binding, 0006007 glucose catabolic process, 0005737 cytoplasm; PDB: 1EQJ_A 1EJJ_A 1O99_A 1O98_A 3IGZ_B 3IGY_B 3NVL_A 2IFY_A.
Probab=27.89 E-value=1.9e+02 Score=22.21 Aligned_cols=60 Identities=17% Similarity=0.211 Sum_probs=37.5
Q ss_pred chhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCcceE-EEEe
Q 021158 36 LWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVF-LVGH 100 (316)
Q Consensus 36 ~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~G~ 100 (316)
+......+++.+.++|..=+.+..-.=|+...+ .+...+++.+.+.+++.+..++. +.|-
T Consensus 44 h~~Hl~al~~~a~~~gv~~V~vH~f~DGRDt~P-----~S~~~yl~~l~~~l~~~~~g~IAsv~GR 104 (223)
T PF06415_consen 44 HIDHLFALIKLAKKQGVKKVYVHAFTDGRDTPP-----KSALKYLEELEEKLAEIGIGRIASVSGR 104 (223)
T ss_dssp -HHHHHHHHHHHHHTT-SEEEEEEEE-SSSS-T-----TTHHHHHHHHHHHHHHHTCTEEEEEEEC
T ss_pred cHHHHHHHHHHHHHcCCCEEEEEEecCCCCCCc-----chHHHHHHHHHHHHHhhCCceEEEEece
Confidence 445677788888888865343433334444433 37788888999999988776654 4453
No 401
>PF02633 Creatininase: Creatinine amidohydrolase; InterPro: IPR003785 This family includes the enzymes creatininase and 2-amino-5-formylamino-6-ribosylaminopyrimidin-4(3H)-one 5'-monophosphate deformylase, also known as formamide hydrolase. Creatinase or creatinine amidohydrolase (3.5.2.10 from EC) catalyses the hydrolysis of creatinine to creatine, which can then be metabolised to urea and sarcosine by creatinase (3.5.3.3 from EC). Creatininase is a member of the urease-related amidohydrolase superfamily []. Formamide hydrolase catalyzes the hydrolysis of the formamide of 2-amino-5-formylamino-6-ribosylamino-4(3H)-pyrimidinone 5'-monophosphate (FAPy) to form 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (APy) (3.5.1.102 from EC). ; PDB: 3A6K_F 3A6F_A 3A6D_B 1J2U_B 3A6J_C 1J2T_A 3A6G_C 3A6H_F 1Q3K_E 3A6L_C ....
Probab=27.65 E-value=1.6e+02 Score=22.69 Aligned_cols=72 Identities=18% Similarity=0.256 Sum_probs=35.0
Q ss_pred HHhhhhhhcC-CceEEccCCCCCCCCCCCCC------CcchhHHHHHHHHHHHHHHhCCcceEEEEecHHHHHHHHHHhh
Q 021158 41 RNQLLYLSSR-GYRAIAPDLRGYGDTDAPPS------VTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLF 113 (316)
Q Consensus 41 ~~~~~~l~~~-g~~v~~~D~~G~G~s~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 113 (316)
..++...+++ |-.++++-++ +|.|..... ....++..++.|+..-+...|.++++++..--|=.-++..+.+
T Consensus 43 ~~~a~~~a~~~~~~lv~P~i~-yG~s~~h~~fpGTisl~~~t~~~~l~di~~sl~~~Gf~~ivivngHgGN~~~l~~~~~ 121 (237)
T PF02633_consen 43 EAVAERAAERLGEALVLPPIP-YGCSPHHMGFPGTISLSPETLIALLRDILRSLARHGFRRIVIVNGHGGNIAALEAAAR 121 (237)
T ss_dssp HHHHHHHHHHHTHEEE---B---BB-GCCTTSTT-BBB-HHHHHHHHHHHHHHHHHHT--EEEEEESSTTHHHHHHHHHH
T ss_pred HHHHHHHHHHCCcEEEeCCCc-cccCcccCCCCCeEEeCHHHHHHHHHHHHHHHHHcCCCEEEEEECCHhHHHHHHHHHH
Confidence 4455555544 2145555544 555543321 1234566677777777777799998887555454435555544
No 402
>TIGR02540 gpx7 putative glutathione peroxidase Gpx7. This model represents one of several families of known and probable glutathione peroxidases. This family is restricted to animals and designated GPX7.
Probab=27.58 E-value=2e+02 Score=20.12 Aligned_cols=57 Identities=7% Similarity=0.036 Sum_probs=31.6
Q ss_pred EeCCeeEEEEEeCCCCeEEEEccCCCc--hhh---hHHhhhhhhcCCceEEccCCCCCCCCC
Q 021158 10 ATNGINMHVASIGTGPAVLFIHGFPEL--WYS---WRNQLLYLSSRGYRAIAPDLRGYGDTD 66 (316)
Q Consensus 10 ~~~g~~l~~~~~g~~p~il~~HG~~~~--~~~---~~~~~~~l~~~g~~v~~~D~~G~G~s~ 66 (316)
..+|..+.......++.||..-...+. ... +..+.+.+.+.|+.++++...-+|.++
T Consensus 9 ~~~G~~~~l~~~~Gk~vvv~~~as~C~~c~~~~~~l~~l~~~~~~~~~~v~~i~~~~~~~~~ 70 (153)
T TIGR02540 9 DARGRTVSLEKYRGKVSLVVNVASECGFTDQNYRALQELHRELGPSHFNVLAFPCNQFGESE 70 (153)
T ss_pred CCCCCEecHHHhCCCEEEEEEeCCCCCchhhhHHHHHHHHHHHhhCCeEEEEEeccccccCC
Confidence 456766655444334544443332221 122 335566677778999999875555553
No 403
>PRK14582 pgaB outer membrane N-deacetylase; Provisional
Probab=27.58 E-value=63 Score=29.41 Aligned_cols=77 Identities=18% Similarity=0.225 Sum_probs=45.6
Q ss_pred CCCeEEEEccCCC----------chhhhHHhhhhhhcCCceEEccCCCC---CCCCCCCCCCcchhHHH----HHHHHHH
Q 021158 23 TGPAVLFIHGFPE----------LWYSWRNQLLYLSSRGYRAIAPDLRG---YGDTDAPPSVTSYTALH----LVGDLIG 85 (316)
Q Consensus 23 ~~p~il~~HG~~~----------~~~~~~~~~~~l~~~g~~v~~~D~~G---~G~s~~~~~~~~~~~~~----~~~~~~~ 85 (316)
++-+||+.|.... +...|...++.|.++||+++.+|--- .|....+...-..+++| ....+.-
T Consensus 47 ~~~~VL~YH~V~d~~~~~~~~~Vspe~Fe~qL~~Lk~nGY~~ISl~el~~~~~g~~~LP~K~VaLTFDDGy~s~yt~A~P 126 (671)
T PRK14582 47 NGFVAIAYHDVEDEAADQRFMSVRTSALREQFAWLRENGYQPVSVAQILEAHRGGKPLPEKAVLLTFDDGYSSFYTRVFP 126 (671)
T ss_pred CceEEEEeCcccCCcccccccccCHHHHHHHHHHHHHCcCEEccHHHHHHHHhcCCCCCCCeEEEEEEcCCCchHHHHHH
Confidence 3468999998743 23468888999999999999998321 12211111111222222 3345677
Q ss_pred HHHHhCCcce-EEEE
Q 021158 86 LLDKLGIHQV-FLVG 99 (316)
Q Consensus 86 ~~~~~~~~~~-~l~G 99 (316)
++++.+..-. .++|
T Consensus 127 ILkkygvpATfFlvg 141 (671)
T PRK14582 127 ILQAFQWPAVWAPVG 141 (671)
T ss_pred HHHHcCCCEEEEEec
Confidence 8888887643 3444
No 404
>PF03490 Varsurf_PPLC: Variant-surface-glycoprotein phospholipase C; InterPro: IPR003633 Variant-surface-glycoprotein phospholipase C, by hydrolysis of the attached glycolipid, releases soluble variant surface glycoprotein containing phosphoinositol from the cell wall after lysis. It catalyses the conversion of variant-surface-glycoprotein 1,2 didecanoyl-SN-phosphatidylinositol and water to 1,2-didecanoylglycerol and the soluble variant-surface-glycoprotein. It also cleaves similar membrane anchors on some mammalian proteins.; GO: 0047396 glycosylphosphatidylinositol diacylglycerol-lyase activity, 0006650 glycerophospholipid metabolic process
Probab=27.46 E-value=69 Score=17.48 Aligned_cols=27 Identities=22% Similarity=0.489 Sum_probs=22.7
Q ss_pred chhHHHHHHHHHHHHHHhCCcceEEEE
Q 021158 73 SYTALHLVGDLIGLLDKLGIHQVFLVG 99 (316)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~l~G 99 (316)
.+..+.|..|+...+..+.+..+.+.|
T Consensus 5 ~w~PqSWM~DLrS~I~~~~I~ql~ipG 31 (51)
T PF03490_consen 5 AWHPQSWMSDLRSSIGEMAITQLFIPG 31 (51)
T ss_pred ccCcHHHHHHHHHHHhcceeeeEEecc
Confidence 456788999999999998888888877
No 405
>COG0518 GuaA GMP synthase - Glutamine amidotransferase domain [Nucleotide transport and metabolism]
Probab=27.31 E-value=2.7e+02 Score=20.86 Aligned_cols=37 Identities=11% Similarity=-0.012 Sum_probs=27.9
Q ss_pred hHHHHHHHHHHHHHHhCCcceEEEEecHHHHHHHHHH
Q 021158 75 TALHLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFC 111 (316)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a 111 (316)
..+.++.....++..++....-++|.|+|..+....+
T Consensus 60 ~~~~w~~~~~~~i~~~~~p~~pvLGIC~G~Ql~A~~l 96 (198)
T COG0518 60 DEDPWLPREKDLIKDAGVPGKPVLGICLGHQLLAKAL 96 (198)
T ss_pred cccccchhHHHHHHHhCCCCCCEEEEChhHHHHHHHh
Confidence 3333688888888888766556899999998776654
No 406
>PF13383 Methyltransf_22: Methyltransferase domain
Probab=27.22 E-value=87 Score=24.31 Aligned_cols=36 Identities=25% Similarity=0.464 Sum_probs=30.9
Q ss_pred CCeEEEEccCCCchhhhHHhhhhhhcCCceEEccCC
Q 021158 24 GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDL 59 (316)
Q Consensus 24 ~p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~ 59 (316)
...+|=+||.+.....|..+.+.|++.||+++..+.
T Consensus 192 ~Qi~iEiH~~~~~~~~~~~~l~~l~~~gfr~F~~e~ 227 (242)
T PF13383_consen 192 CQILIEIHGWPSEHREWYKLLQELEKAGFRLFNVEP 227 (242)
T ss_pred cEEEEEEEeCccchhHHHHHHHHHHHCCcEEEEecC
Confidence 578999999888777788899999999999988763
No 407
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=27.02 E-value=2.1e+02 Score=24.61 Aligned_cols=61 Identities=10% Similarity=0.017 Sum_probs=37.6
Q ss_pred hhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCcceEEEEecHHHHHHHHHHhhch
Q 021158 45 LYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRP 115 (316)
Q Consensus 45 ~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p 115 (316)
..+.+.+|.++.+|-+|.-.. -..+.+.+..+.+......++++--++-|.-+...+..+.
T Consensus 176 ~~~~~~~~DvViIDTaGr~~~----------d~~lm~El~~i~~~~~p~e~lLVlda~~Gq~a~~~a~~F~ 236 (429)
T TIGR01425 176 EKFKKENFDIIIVDTSGRHKQ----------EDSLFEEMLQVAEAIQPDNIIFVMDGSIGQAAEAQAKAFK 236 (429)
T ss_pred HHHHhCCCCEEEEECCCCCcc----------hHHHHHHHHHHhhhcCCcEEEEEeccccChhHHHHHHHHH
Confidence 344445799999999984321 2334455666555555556777776776666666665543
No 408
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=26.95 E-value=96 Score=23.81 Aligned_cols=34 Identities=24% Similarity=0.307 Sum_probs=20.8
Q ss_pred CCeEEEEccCCCch-----hhhHHhhhhhhcCCceEEcc
Q 021158 24 GPAVLFIHGFPELW-----YSWRNQLLYLSSRGYRAIAP 57 (316)
Q Consensus 24 ~p~il~~HG~~~~~-----~~~~~~~~~l~~~g~~v~~~ 57 (316)
++.|++.+|.+... +.|..+++.|.+.|+.|+.+
T Consensus 105 ~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~ 143 (247)
T PF01075_consen 105 KPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLL 143 (247)
T ss_dssp SSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE-
T ss_pred CCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEE
Confidence 47788888876633 44677888888887777654
No 409
>PLN03006 carbonate dehydratase
Probab=26.90 E-value=81 Score=25.32 Aligned_cols=31 Identities=16% Similarity=0.214 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHhCCcceEEEEecHHHHHHHH
Q 021158 79 LVGDLIGLLDKLGIHQVFLVGHDWGALIAWY 109 (316)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~ 109 (316)
....|...+..++.+.|+++|||-=|.+...
T Consensus 158 ~~aSLEYAV~~L~V~~IVV~GHs~CGaV~Aa 188 (301)
T PLN03006 158 TKAALEFSVNTLNVENILVIGHSRCGGIQAL 188 (301)
T ss_pred hhhhHHHHHHHhCCCEEEEecCCCchHHHHH
Confidence 4567888889999999999999976655543
No 410
>TIGR02883 spore_cwlD N-acetylmuramoyl-L-alanine amidase CwlD. Members of this protein family are the CwlD family of N-acetylmuramoyl-L-alanine amidase. This family has been called the germination-specific N-acetylmuramoyl-L-alanine amidase. CwlD is required, along with the putative deactylase PdaA, to make muramic delta-lactam, a novel peptidoglycan constituent found only in spores. CwlD mutants show a germination defect.
Probab=26.86 E-value=1.4e+02 Score=22.00 Aligned_cols=38 Identities=24% Similarity=0.249 Sum_probs=20.0
Q ss_pred EEccCCCCCCCCCCCCCCc-chh----HHHHHHHHHHHHHHhCC
Q 021158 54 AIAPDLRGYGDTDAPPSVT-SYT----ALHLVGDLIGLLDKLGI 92 (316)
Q Consensus 54 v~~~D~~G~G~s~~~~~~~-~~~----~~~~~~~~~~~~~~~~~ 92 (316)
+|++| ||||..++..... ... ..+++..+...|+..|.
T Consensus 2 ~I~iD-pGHGg~d~GA~~~~g~~E~~~~l~ia~~l~~~L~~~G~ 44 (189)
T TIGR02883 2 IIVID-PGHGGIDGGAVGKDGTLEKDITLEIALKLKDYLQEQGA 44 (189)
T ss_pred EEEEe-CCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHhCCC
Confidence 45666 8998876543211 122 22344555566666554
No 411
>COG5441 Uncharacterized conserved protein [Function unknown]
Probab=26.49 E-value=3e+02 Score=22.25 Aligned_cols=97 Identities=8% Similarity=0.053 Sum_probs=57.4
Q ss_pred eEEEEccCCCch-hhhHHhhhhhhcCCceEEccCCCCCCCCCCCCC---------------------CcchhHHHHHHHH
Q 021158 26 AVLFIHGFPELW-YSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPS---------------------VTSYTALHLVGDL 83 (316)
Q Consensus 26 ~il~~HG~~~~~-~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~---------------------~~~~~~~~~~~~~ 83 (316)
..|++-|.+... +....+.+.....|-.++.+|.--.+......+ .....+..+++.+
T Consensus 3 krIyVvgT~DTKg~EL~ylad~I~~aG~~~v~vDvs~~~~~~~~~dis~~~VA~~hp~~~qAv~~~~Drg~AiaaMa~A~ 82 (401)
T COG5441 3 KRIYVVGTADTKGEELAYLADLIEAAGGSPVLVDVSTLRNPTSEVDISAEDVAGAHPGGRQAVLDGNDRGSAIAAMAEAF 82 (401)
T ss_pred ceEEEEecCCCcchhHHHHHHHHHHcCCCeEEEEeeccCCCCCCcccCHHHHhhhCCCcceeEeccCchhHHHHHHHHHH
Confidence 456677776654 457777888888899999999753322111110 0111222333333
Q ss_pred HHHHHHh-CCcceEEEEecHHHHHHHHHHhhchhHHhhhh
Q 021158 84 IGLLDKL-GIHQVFLVGHDWGALIAWYFCLFRPDRVKALV 122 (316)
Q Consensus 84 ~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i 122 (316)
..++.+- +..-++-+|-|.|..++.-.+.+.|--+-+++
T Consensus 83 ~r~l~sR~dV~gmig~GGsgGT~lit~~m~~LPlgvPK~m 122 (401)
T COG5441 83 VRFLSSRGDVAGMIGMGGSGGTALITPAMRRLPLGVPKVM 122 (401)
T ss_pred HHHhhcccchhheeecCCCcchHhhhhHHHhcCcCCccee
Confidence 3333332 33457788999999999888888775555544
No 412
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=26.43 E-value=68 Score=23.40 Aligned_cols=32 Identities=19% Similarity=0.125 Sum_probs=21.4
Q ss_pred EEEccCCCchhh--hHHhhhhhhcCCceEEccCC
Q 021158 28 LFIHGFPELWYS--WRNQLLYLSSRGYRAIAPDL 59 (316)
Q Consensus 28 l~~HG~~~~~~~--~~~~~~~l~~~g~~v~~~D~ 59 (316)
.+..+-|+.... -..++..|+++|++|+.+|.
T Consensus 2 ~v~~~kGG~GKTt~a~~la~~la~~g~~VlliD~ 35 (195)
T PF01656_consen 2 AVTSGKGGVGKTTIAANLAQALARKGKKVLLIDL 35 (195)
T ss_dssp EEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEE
T ss_pred EEEcCCCCccHHHHHHHHHhcccccccccccccc
Confidence 344444444433 35578889899999999997
No 413
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from
Probab=26.18 E-value=2.8e+02 Score=20.76 Aligned_cols=87 Identities=16% Similarity=0.043 Sum_probs=45.3
Q ss_pred CCCeEEEEccCCCchhh-hHHhhhhhhcCCceEEccCCCCCCCCCCC------------CCCcch-hHHHHHH--HHHHH
Q 021158 23 TGPAVLFIHGFPELWYS-WRNQLLYLSSRGYRAIAPDLRGYGDTDAP------------PSVTSY-TALHLVG--DLIGL 86 (316)
Q Consensus 23 ~~p~il~~HG~~~~~~~-~~~~~~~l~~~g~~v~~~D~~G~G~s~~~------------~~~~~~-~~~~~~~--~~~~~ 86 (316)
.++.|+++.-....... ...+.+.+.+.|..+..+...-....+.. ...... -...+.+ .+..+
T Consensus 28 ~~~~i~~iptA~~~~~~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~l~~ad~I~~~GG~~~~~~~~l~~t~~~~~i 107 (210)
T cd03129 28 AGARVLFIPTASGDRDEYGEEYRAAFERLGVEVVHLLLIDTANDPDVVARLLEADGIFVGGGNQLRLLSVLRETPLLDAI 107 (210)
T ss_pred CCCeEEEEeCCCCChHHHHHHHHHHHHHcCCceEEEeccCCCCCHHHHHHHhhCCEEEEcCCcHHHHHHHHHhCChHHHH
Confidence 45778888776654433 44556667777877765554322100000 000111 1122222 12233
Q ss_pred HHHhCCcceEEEEecHHHHHHHHH
Q 021158 87 LDKLGIHQVFLVGHDWGALIAWYF 110 (316)
Q Consensus 87 ~~~~~~~~~~l~G~S~Gg~~a~~~ 110 (316)
++... +-.+++|.|.|+++....
T Consensus 108 ~~~~~-~G~v~~G~SAGA~~~~~~ 130 (210)
T cd03129 108 LKRVA-RGVVIGGTSAGAAVMGET 130 (210)
T ss_pred HHHHH-cCCeEEEcCHHHHHhhhc
Confidence 33333 467899999999988775
No 414
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=26.15 E-value=72 Score=34.40 Aligned_cols=31 Identities=23% Similarity=0.313 Sum_probs=25.0
Q ss_pred HHHHHHHhCCcceEEEEecHHHHHHHHHHhh
Q 021158 83 LIGLLDKLGIHQVFLVGHDWGALIAWYFCLF 113 (316)
Q Consensus 83 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 113 (316)
+.++++..|+++-.++|||+|=..|+.++..
T Consensus 664 l~~lL~~~Gi~Pd~v~GHSlGE~aAa~aAGv 694 (2582)
T TIGR02813 664 QYKLFTQAGFKADMTAGHSFGELSALCAAGV 694 (2582)
T ss_pred HHHHHHHcCCccceeecCCHHHHHHHHHhCC
Confidence 3455677899999999999999999887743
No 415
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=26.08 E-value=1.6e+02 Score=20.52 Aligned_cols=29 Identities=14% Similarity=-0.087 Sum_probs=20.7
Q ss_pred cCCCchhhhHHhhhhhhcCCceEEccCCC
Q 021158 32 GFPELWYSWRNQLLYLSSRGYRAIAPDLR 60 (316)
Q Consensus 32 G~~~~~~~~~~~~~~l~~~g~~v~~~D~~ 60 (316)
+.||.......++..|.++|+.|..+...
T Consensus 10 ~~GG~e~~~~~l~~~l~~~G~~v~v~~~~ 38 (177)
T PF13439_consen 10 NIGGAERVVLNLARALAKRGHEVTVVSPG 38 (177)
T ss_dssp SSSHHHHHHHHHHHHHHHTT-EEEEEESS
T ss_pred CCChHHHHHHHHHHHHHHCCCEEEEEEcC
Confidence 34555566788899999999998877443
No 416
>cd08185 Fe-ADH1 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenases-like (ADH). Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions. The protein structure represents a dehydroquinate synthase fold and is a member of the iron-containing alcohol dehydrogenase-like family. They are distinct from other alcohol dehydrogenases which contain different protein domains. Proteins of this family have not been characterized. Their specific function is unknown. They are present in bacteria and archaea.
Probab=25.98 E-value=3e+02 Score=23.12 Aligned_cols=64 Identities=19% Similarity=0.127 Sum_probs=38.3
Q ss_pred CeEEEEccCCC--chhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCcceEEEE
Q 021158 25 PAVLFIHGFPE--LWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVG 99 (316)
Q Consensus 25 p~il~~HG~~~--~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 99 (316)
..++++.|-.. ....+..+...|.+.|..+..+|-- ...+ + .+.++.+.+.++..+.+-|+-+|
T Consensus 26 ~r~livt~~~~~~~~g~~~~v~~~L~~~~~~~~~~~~v-----~~~p-----~-~~~v~~~~~~~~~~~~D~IiavG 91 (380)
T cd08185 26 KKALIVTGNGSSKKTGYLDRVIELLKQAGVEVVVFDKV-----EPNP-----T-TTTVMEGAALAREEGCDFVVGLG 91 (380)
T ss_pred CeEEEEeCCCchhhccHHHHHHHHHHHcCCeEEEeCCc-----cCCC-----C-HHHHHHHHHHHHHcCCCEEEEeC
Confidence 56777887554 4456778888888888887766511 1111 2 23344555556666666565554
No 417
>PF03681 UPF0150: Uncharacterised protein family (UPF0150); InterPro: IPR005357 This family of small proteins is uncharacterised. In Q9A3L8 from SWISSPROT this domain is found next to a DNA binding helix-turn-helix domain IPR002145 from INTERPRO, which suggests that this is some kind of ligand binding domain.; PDB: 2DSY_C 2YZT_A 3KWR_A.
Probab=25.93 E-value=1.2e+02 Score=16.17 Aligned_cols=33 Identities=27% Similarity=0.279 Sum_probs=21.9
Q ss_pred cCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHH
Q 021158 49 SRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLD 88 (316)
Q Consensus 49 ~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~ 88 (316)
+.||.+.++|+||.-. ...+.++..+.+.+.+.
T Consensus 11 ~~~y~~~~pdlpg~~t-------~G~t~eea~~~~~eal~ 43 (48)
T PF03681_consen 11 DGGYVAYFPDLPGCFT-------QGDTLEEALENAKEALE 43 (48)
T ss_dssp SSSEEEEETTCCTCEE-------EESSHHHHHHHHHHHHH
T ss_pred CCeEEEEeCCccChhh-------cCCCHHHHHHHHHHHHH
Confidence 4579999999997641 23356666666666554
No 418
>PF05973 Gp49: Phage derived protein Gp49-like (DUF891); InterPro: IPR009241 This entry consists of several hypothetical viral and bacterial proteins some are annotated as addiction module killer proteins.
Probab=25.93 E-value=85 Score=19.65 Aligned_cols=22 Identities=18% Similarity=0.280 Sum_probs=15.1
Q ss_pred CeeEEEEEeCCCCeEEEEccCCC
Q 021158 13 GINMHVASIGTGPAVLFIHGFPE 35 (316)
Q Consensus 13 g~~l~~~~~g~~p~il~~HG~~~ 35 (316)
..++.|...+++ .||++||+.=
T Consensus 52 ~~Ri~y~~~~~~-~ivll~~f~K 73 (91)
T PF05973_consen 52 IYRILYFFDGGD-IIVLLHGFIK 73 (91)
T ss_pred cceEEEEEcCcc-EEEEEEEEEe
Confidence 566666655443 8999999853
No 419
>TIGR02572 LcrR type III secretion system regulator LcrR. This protein is found in type III secretion operons and has been characterized in Yersinia as a regulator of the Low-Calcium Respone (LCR).
Probab=25.66 E-value=1.6e+02 Score=20.30 Aligned_cols=73 Identities=14% Similarity=0.148 Sum_probs=39.8
Q ss_pred EEeCCeeEEEEEeCCCCeEEEEccCCCchhhhHHhhh--hhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHH
Q 021158 9 VATNGINMHVASIGTGPAVLFIHGFPELWYSWRNQLL--YLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGD 82 (316)
Q Consensus 9 ~~~~g~~l~~~~~g~~p~il~~HG~~~~~~~~~~~~~--~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~ 82 (316)
+..+|.++.|+..++.-.|+++-=......--.+++. .|+++...|+.+|++=+|.-+...+ ...+-+.+++-
T Consensus 32 f~l~g~~lawRVE~~rviI~lLrR~~~~~GL~NpFa~LylLae~~~~~lg~~~~lyGnV~vl~g-S~ls~~Rl~~F 106 (139)
T TIGR02572 32 VEVDGCELAWRVEEERVWIVLLRRVSQRRGLANPFAALYLLAEAAIALLGPDWRLYGNVDVLAG-SPLSSQRLARF 106 (139)
T ss_pred EEEcceEEEEEecCCEEEEEEEEEcccccCcCCcHHHHHHHHHHHHhhcCCCCEEEeeeeEecC-CCCcHHHHHHH
Confidence 5678888888887655556666543333222233332 3455557777777776665543322 23344444433
No 420
>cd00884 beta_CA_cladeB Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=25.63 E-value=96 Score=22.98 Aligned_cols=33 Identities=12% Similarity=0.094 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHhCCcceEEEEecHHHHHHHHHH
Q 021158 79 LVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFC 111 (316)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a 111 (316)
....+...+..++.+.++++|||-=|.+...+.
T Consensus 73 ~~asleyav~~l~v~~ivV~GH~~Cgav~Aa~~ 105 (190)
T cd00884 73 TSAAIEYAVAVLKVEHIVVCGHSDCGGIRALLS 105 (190)
T ss_pred hhhhHHHHHHHhCCCEEEEeCCCcchHHHHHhc
Confidence 456777888899999999999997666655443
No 421
>KOG3179 consensus Predicted glutamine synthetase [Nucleotide transport and metabolism]
Probab=25.59 E-value=1.1e+02 Score=22.84 Aligned_cols=39 Identities=15% Similarity=0.214 Sum_probs=32.0
Q ss_pred chhHHHHHHHHHHHHHHhCCcceEEEEecHHHHHHHHHH
Q 021158 73 SYTALHLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFC 111 (316)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a 111 (316)
.++-.+|+--+..+++.+...+.-++|.|+|-.+..++.
T Consensus 72 Af~d~dWI~KLcs~~kkld~mkkkvlGICFGHQiiara~ 110 (245)
T KOG3179|consen 72 AFSDADWIKKLCSFVKKLDFMKKKVLGICFGHQIIARAK 110 (245)
T ss_pred ccccchHHHHHHHHHHHHHhhccceEEEeccHHHHHHhh
Confidence 455678888889999988777778899999998887665
No 422
>PLN02251 pyrophosphate-dependent phosphofructokinase
Probab=25.28 E-value=2.6e+02 Score=25.07 Aligned_cols=85 Identities=13% Similarity=0.039 Sum_probs=41.2
Q ss_pred EEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCC--cchhHHHHHHHHHHHHHHh-----CCcceE---
Q 021158 27 VLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSV--TSYTALHLVGDLIGLLDKL-----GIHQVF--- 96 (316)
Q Consensus 27 il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~--~~~~~~~~~~~~~~~~~~~-----~~~~~~--- 96 (316)
-|++=|..++...-..+.+++.++|+.+-++-.|..-+.+-.... ....++..++-+.+.+..+ ...+.+
T Consensus 193 ~LViIGGddS~~~A~~Lae~~~~~g~~i~VIGVPKTIDNDL~~td~e~s~GFdTA~k~~a~~I~ni~~da~S~~k~~~~V 272 (568)
T PLN02251 193 GLVVIGGDDSNTNACLLAEYFRAKNLKTRVIGCPKTIDGDLKSKEVPTSFGFDTACKIYSEMIGNVMIDARSTGKYYHFV 272 (568)
T ss_pred EEEEeCCchHHHHHHHHHHHHHhcCCCeeEEEeCceEeCCCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCEEEEE
Confidence 344445555555556677778777855444444443333322211 2334444444444444433 122322
Q ss_pred -EEEecHHHHHHHHHHh
Q 021158 97 -LVGHDWGALIAWYFCL 112 (316)
Q Consensus 97 -l~G~S~Gg~~a~~~a~ 112 (316)
+||-+.| ++|+..+.
T Consensus 273 evMGR~aG-~LAL~~aL 288 (568)
T PLN02251 273 RLMGRAAS-HITLECAL 288 (568)
T ss_pred EeCCCchH-HHHHHHHH
Confidence 5777755 45554443
No 423
>PRK05723 flavodoxin; Provisional
Probab=25.23 E-value=88 Score=22.11 Aligned_cols=22 Identities=23% Similarity=0.199 Sum_probs=14.5
Q ss_pred hHHHHHHHHHHHHHHhCCcceE
Q 021158 75 TALHLVGDLIGLLDKLGIHQVF 96 (316)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~ 96 (316)
.+-..++.+.+.++.+|.+++.
T Consensus 100 ~Fc~a~~~ld~~L~~lGA~rv~ 121 (151)
T PRK05723 100 TFCGGGEQMRELFAELGVREVQ 121 (151)
T ss_pred HHhHHHHHHHHHHHHCCCcEee
Confidence 3555666777777777766654
No 424
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=25.12 E-value=74 Score=21.37 Aligned_cols=13 Identities=23% Similarity=0.365 Sum_probs=10.2
Q ss_pred hhhhcCCceEEcc
Q 021158 45 LYLSSRGYRAIAP 57 (316)
Q Consensus 45 ~~l~~~g~~v~~~ 57 (316)
..|.+.|+.|+.+
T Consensus 101 ~~L~~~Gw~Vlr~ 113 (117)
T TIGR00632 101 SRLQELGWRVLRV 113 (117)
T ss_pred HHHHHCcCEEEEE
Confidence 4678889998865
No 425
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=25.00 E-value=61 Score=22.04 Aligned_cols=32 Identities=16% Similarity=0.111 Sum_probs=21.9
Q ss_pred EEEEccCCCchhhhHHhhhhhhcCCceEEccC
Q 021158 27 VLFIHGFPELWYSWRNQLLYLSSRGYRAIAPD 58 (316)
Q Consensus 27 il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D 58 (316)
++...|..++-.=+-.+++.|.++|+.|...-
T Consensus 2 li~~~Gt~Ghv~P~lala~~L~~rGh~V~~~~ 33 (139)
T PF03033_consen 2 LIATGGTRGHVYPFLALARALRRRGHEVRLAT 33 (139)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHTT-EEEEEE
T ss_pred EEEEcCChhHHHHHHHHHHHHhccCCeEEEee
Confidence 45555666666667778899999999987443
No 426
>KOG4231 consensus Intracellular membrane-bound Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=24.96 E-value=81 Score=27.37 Aligned_cols=56 Identities=16% Similarity=0.233 Sum_probs=32.8
Q ss_pred hhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCcce-----EEEEecHHHHHHHHHHhhc
Q 021158 46 YLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQV-----FLVGHDWGALIAWYFCLFR 114 (316)
Q Consensus 46 ~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~l~G~S~Gg~~a~~~a~~~ 114 (316)
....+|.+++.+|--|.- . - ..-.+..-++.+..+|| .+.|.|-||++|..+..++
T Consensus 411 ~vkg~G~rILSiDGGGtr---G-----~-----~~lqiL~kieklsgKpIheLFD~ICGvSTG~ilA~~Lg~k~ 471 (763)
T KOG4231|consen 411 QVKGQGLRILSIDGGGTR---G-----L-----ATLQILKKIEKLSGKPIHELFDLICGVSTGGILAIALGVKL 471 (763)
T ss_pred ccCCCceEEEEecCCCcc---c-----h-----hHHHHHHHHHHhcCCcHHHHHHHHhccCchHHHHHHHHhcC
Confidence 344668889988843321 1 1 11122233344433443 3679999999999887653
No 427
>PLN03019 carbonic anhydrase
Probab=24.73 E-value=89 Score=25.44 Aligned_cols=32 Identities=13% Similarity=0.127 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHhCCcceEEEEecHHHHHHHHH
Q 021158 79 LVGDLIGLLDKLGIHQVFLVGHDWGALIAWYF 110 (316)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~ 110 (316)
....|...+..++.+.|+++|||-=|.+...+
T Consensus 201 v~aSIEYAV~~L~V~~IVV~GHs~CGaVkAal 232 (330)
T PLN03019 201 VGAAIEYAVLHLKVENIVVIGHSACGGIKGLM 232 (330)
T ss_pred cchhHHHHHHHhCCCEEEEecCCCchHHHHHH
Confidence 45678888899999999999999766555443
No 428
>COG1255 Uncharacterized protein conserved in archaea [Function unknown]
Probab=24.25 E-value=53 Score=21.91 Aligned_cols=22 Identities=23% Similarity=0.437 Sum_probs=18.6
Q ss_pred hhHHhhhhhhcCCceEEccCCC
Q 021158 39 SWRNQLLYLSSRGYRAIAPDLR 60 (316)
Q Consensus 39 ~~~~~~~~l~~~g~~v~~~D~~ 60 (316)
.+..+++.|+++||.|++.|.-
T Consensus 24 ~~~~VA~~L~e~g~dv~atDI~ 45 (129)
T COG1255 24 FFLDVAKRLAERGFDVLATDIN 45 (129)
T ss_pred hHHHHHHHHHHcCCcEEEEecc
Confidence 4567889999999999999964
No 429
>COG0288 CynT Carbonic anhydrase [Inorganic ion transport and metabolism]
Probab=23.93 E-value=74 Score=23.97 Aligned_cols=36 Identities=14% Similarity=0.097 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHhCCcceEEEEecHHHHHHHHHHh
Q 021158 77 LHLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCL 112 (316)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 112 (316)
......+...+..++.+.|+++||+-=|++...+..
T Consensus 76 ~~~l~sleyAv~~L~v~~IiV~GH~~CGav~aa~~~ 111 (207)
T COG0288 76 GSVLRSLEYAVYVLGVKEIIVCGHTDCGAVKAALDD 111 (207)
T ss_pred cchhHHHHHHHHHcCCCEEEEecCCCcHHHHhcccc
Confidence 566778888899999999999999976666655443
No 430
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=23.86 E-value=2.6e+02 Score=19.88 Aligned_cols=74 Identities=15% Similarity=0.091 Sum_probs=43.5
Q ss_pred CeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCC--cceEEEEecH
Q 021158 25 PAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGI--HQVFLVGHDW 102 (316)
Q Consensus 25 p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~G~S~ 102 (316)
|.|.++-|..++....+.....|.+.|.. +|.+ ..+.....+.+.++++.... -++++.+-.+
T Consensus 1 p~V~Ii~gs~SD~~~~~~a~~~L~~~gi~---~~~~------------V~saHR~p~~l~~~~~~~~~~~~~viIa~AG~ 65 (150)
T PF00731_consen 1 PKVAIIMGSTSDLPIAEEAAKTLEEFGIP---YEVR------------VASAHRTPERLLEFVKEYEARGADVIIAVAGM 65 (150)
T ss_dssp -EEEEEESSGGGHHHHHHHHHHHHHTT-E---EEEE------------E--TTTSHHHHHHHHHHTTTTTESEEEEEEES
T ss_pred CeEEEEeCCHHHHHHHHHHHHHHHHcCCC---EEEE------------EEeccCCHHHHHHHHHHhccCCCEEEEEECCC
Confidence 56888888888888888888888887732 2321 11222233455566665532 2577777777
Q ss_pred HHHHHHHHHhh
Q 021158 103 GALIAWYFCLF 113 (316)
Q Consensus 103 Gg~~a~~~a~~ 113 (316)
-+.+.-.++..
T Consensus 66 ~a~Lpgvva~~ 76 (150)
T PF00731_consen 66 SAALPGVVASL 76 (150)
T ss_dssp S--HHHHHHHH
T ss_pred cccchhhheec
Confidence 77777666654
No 431
>cd03144 GATase1_ScBLP_like Type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Saccharomyces cerevisiae biotin-apoprotein ligase (ScBLP). Type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Saccharomyces cerevisiae biotin-apoprotein ligase (ScBLP). Biotin-apoprotein ligase modifies proteins by covalently attaching biotin. ScBLP is known to biotinylate acety-CoA carboxylase and pyruvate carboxylase. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, the Cys residue found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow in a typical GATase1 domain is conserved.
Probab=23.82 E-value=92 Score=20.81 Aligned_cols=14 Identities=29% Similarity=0.150 Sum_probs=11.8
Q ss_pred ceEEEEecHHHHHH
Q 021158 94 QVFLVGHDWGALIA 107 (316)
Q Consensus 94 ~~~l~G~S~Gg~~a 107 (316)
.--++|.|+|+.++
T Consensus 77 g~p~LGIClGAy~a 90 (114)
T cd03144 77 GGNYLGICAGAYLA 90 (114)
T ss_pred CCcEEEEecCccce
Confidence 34688999999998
No 432
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]
Probab=23.76 E-value=1.7e+02 Score=24.22 Aligned_cols=60 Identities=17% Similarity=0.229 Sum_probs=37.3
Q ss_pred eEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCc
Q 021158 26 AVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIH 93 (316)
Q Consensus 26 ~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (316)
+|+.+-|.-.|+- .+..|.++||.|+.+-+..+..+.. ...+..+..+|...+.+.+|+.
T Consensus 6 V~v~mSGGVDSSV----aA~lLk~QGyeViGl~m~~~~~~~~----~~C~s~~d~~da~~va~~LGIp 65 (356)
T COG0482 6 VLVGMSGGVDSSV----AAYLLKEQGYEVIGLFMKNWDEDGG----GGCCSEEDLRDAERVADQLGIP 65 (356)
T ss_pred EEEEccCCHHHHH----HHHHHHHcCCeEEEEEEEeeccCCC----CcCCchhHHHHHHHHHHHhCCc
Confidence 4555555544432 2345678899999998887664111 2344555666777777777754
No 433
>PRK07933 thymidylate kinase; Validated
Probab=23.76 E-value=1.5e+02 Score=22.32 Aligned_cols=39 Identities=18% Similarity=0.185 Sum_probs=28.7
Q ss_pred EEEEccCCCchhh--hHHhhhhhhcCCceEEccCCCCCCCC
Q 021158 27 VLFIHGFPELWYS--WRNQLLYLSSRGYRAIAPDLRGYGDT 65 (316)
Q Consensus 27 il~~HG~~~~~~~--~~~~~~~l~~~g~~v~~~D~~G~G~s 65 (316)
+|.+=|.-++.-+ -..+.+.|...|+.|+....|++|.+
T Consensus 2 ~IviEG~dGsGKST~~~~L~~~L~~~g~~v~~~~~P~~~~~ 42 (213)
T PRK07933 2 LIAIEGVDGAGKRTLTEALRAALEARGRSVATLAFPRYGRS 42 (213)
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHCCCeEEEEecCCCCCC
Confidence 4556676555433 46678899999999999999977744
No 434
>TIGR03586 PseI pseudaminic acid synthase.
Probab=23.55 E-value=4.2e+02 Score=21.83 Aligned_cols=79 Identities=13% Similarity=0.153 Sum_probs=46.7
Q ss_pred CCeEEEEccCCCchhhhHHhhhhhhcCCc-eEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCcceEEEEecH
Q 021158 24 GPAVLFIHGFPELWYSWRNQLLYLSSRGY-RAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDW 102 (316)
Q Consensus 24 ~p~il~~HG~~~~~~~~~~~~~~l~~~g~-~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 102 (316)
+.+||+--|+ ++...|...++.+.+.|. .++.... -|.-+......+. ..+..+-+..+ -+|.+..|+.
T Consensus 134 gkPvilstG~-~t~~Ei~~Av~~i~~~g~~~i~LlhC----~s~YP~~~~~~nL----~~i~~lk~~f~-~pVG~SDHt~ 203 (327)
T TIGR03586 134 GKPIIMSTGI-ATLEEIQEAVEACREAGCKDLVLLKC----TSSYPAPLEDANL----RTIPDLAERFN-VPVGLSDHTL 203 (327)
T ss_pred CCcEEEECCC-CCHHHHHHHHHHHHHCCCCcEEEEec----CCCCCCCcccCCH----HHHHHHHHHhC-CCEEeeCCCC
Confidence 5789999998 588899999999988776 3444431 2222211122222 23333333344 4677889999
Q ss_pred HHHHHHHHHh
Q 021158 103 GALIAWYFCL 112 (316)
Q Consensus 103 Gg~~a~~~a~ 112 (316)
|-.+++.+.+
T Consensus 204 G~~~~~aAva 213 (327)
T TIGR03586 204 GILAPVAAVA 213 (327)
T ss_pred chHHHHHHHH
Confidence 9655544443
No 435
>PF04763 DUF562: Protein of unknown function (DUF562); InterPro: IPR006850 This represents a conserved region found in a number of Chlamydophila pneumoniae proteins.
Probab=23.49 E-value=1.8e+02 Score=20.09 Aligned_cols=38 Identities=18% Similarity=0.138 Sum_probs=28.5
Q ss_pred CCeEEEEccCCC----chhhhHHhhhhhhcCCc---eEEccCCCC
Q 021158 24 GPAVLFIHGFPE----LWYSWRNQLLYLSSRGY---RAIAPDLRG 61 (316)
Q Consensus 24 ~p~il~~HG~~~----~~~~~~~~~~~l~~~g~---~v~~~D~~G 61 (316)
.-+||+.|+.++ ....+..+...|...|| ++++++..+
T Consensus 17 ~vvVv~~~~~~~~~~l~~~s~~~l~~eL~~~GYSylNIfs~~~~~ 61 (146)
T PF04763_consen 17 NVVVVCNHSWPGPESLPPESVSLLIEELEESGYSYLNIFSCSSES 61 (146)
T ss_pred cEEEEEeCCcccccCCChHHHHHHHHHHhhcCCceEEEEEEcCCC
Confidence 457888888754 56678888999998886 577777654
No 436
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=23.41 E-value=1.5e+02 Score=23.10 Aligned_cols=18 Identities=28% Similarity=0.392 Sum_probs=16.1
Q ss_pred EEEEecHHHHHHHHHHhh
Q 021158 96 FLVGHDWGALIAWYFCLF 113 (316)
Q Consensus 96 ~l~G~S~Gg~~a~~~a~~ 113 (316)
.+.|.|.||.+|+.++..
T Consensus 37 ~i~GtS~G~iia~~l~~~ 54 (258)
T cd07199 37 LIAGTSTGGIIALGLALG 54 (258)
T ss_pred eeeeccHHHHHHHHHhcC
Confidence 478999999999999886
No 437
>COG2452 Predicted site-specific integrase-resolvase [DNA replication, recombination, and repair]
Probab=23.39 E-value=3.1e+02 Score=20.37 Aligned_cols=54 Identities=11% Similarity=0.086 Sum_probs=33.4
Q ss_pred eEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhC
Q 021158 26 AVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLG 91 (316)
Q Consensus 26 ~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (316)
-|++.|----....+..+...+..+|..++.+|.- ..+.+++++|+.+++..+.
T Consensus 117 rVvV~ykDRL~RFGfe~le~~~~a~~~eivvv~~~------------e~~~eELveDlisIltsfs 170 (193)
T COG2452 117 RVVVSYKDRLNRFGFELVEAVCKAHNVEIVVVNQE------------DKDSEELVEDLVSILTSFS 170 (193)
T ss_pred EEEEEccchHhHHhHHHHHHHHHhcCcEEEEecCC------------CCCHHHHHHHHHHHHHHHH
Confidence 34555543333333555666667777777777732 2233899999999887653
No 438
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=23.20 E-value=63 Score=24.43 Aligned_cols=17 Identities=29% Similarity=0.606 Sum_probs=13.4
Q ss_pred hhhhhcCCceEEccCCC
Q 021158 44 LLYLSSRGYRAIAPDLR 60 (316)
Q Consensus 44 ~~~l~~~g~~v~~~D~~ 60 (316)
+..|+++|+.|+++|.-
T Consensus 49 a~~LA~~G~~V~gvD~S 65 (213)
T TIGR03840 49 LAWLAEQGHRVLGVELS 65 (213)
T ss_pred HHHHHhCCCeEEEEeCC
Confidence 45567889999999963
No 439
>TIGR00176 mobB molybdopterin-guanine dinucleotide biosynthesis protein MobB. This molybdenum cofactor biosynthesis enzyme is similar to the urease accessory protein UreG and to the hydrogenase accessory protein HypB, both GTP hydrolases involved in loading nickel into the metallocenters of their respective target enzymes.
Probab=23.10 E-value=1.2e+02 Score=21.56 Aligned_cols=37 Identities=24% Similarity=0.174 Sum_probs=26.2
Q ss_pred EEEEccCCCchhh--hHHhhhhhhcCCceEEccCCCCCC
Q 021158 27 VLFIHGFPELWYS--WRNQLLYLSSRGYRAIAPDLRGYG 63 (316)
Q Consensus 27 il~~HG~~~~~~~--~~~~~~~l~~~g~~v~~~D~~G~G 63 (316)
|+.+-|..++... ...++..|.++|++|.++..-+|+
T Consensus 1 vi~i~G~~gsGKTtl~~~l~~~l~~~G~~V~viK~~~~~ 39 (155)
T TIGR00176 1 VLQIVGPKNSGKTTLIERLVKALKARGYRVATIKHDHHD 39 (155)
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEeccccc
Confidence 3455576655544 367888888889999999876554
No 440
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=23.03 E-value=1.2e+02 Score=24.83 Aligned_cols=34 Identities=15% Similarity=0.213 Sum_probs=24.8
Q ss_pred CCeEEEEcc-CCC-----chhhhHHhhhhhhcCCceEEcc
Q 021158 24 GPAVLFIHG-FPE-----LWYSWRNQLLYLSSRGYRAIAP 57 (316)
Q Consensus 24 ~p~il~~HG-~~~-----~~~~~~~~~~~l~~~g~~v~~~ 57 (316)
+|.|++.|| ..+ +.+.|..+++.|.++|+.|+.+
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~ 214 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLF 214 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEe
Confidence 478888888 432 3456788889998888777764
No 441
>TIGR00421 ubiX_pad polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases. In E.coli, the protein UbiX (3-octaprenyl-4-hydroxybenzoate carboxy-lyase) has been shown to be involved in the third step of ubiquinone biosynthesis. It catalyzes the reaction [3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2]. The knockout of the homologous protein in yeast confers sensitivity to phenylacrylic acid. Members are not restricted to ubiquinone-synthesizing species. This family represents a distinct clade within the flavoprotein family of Pfam model pfam02441.
Probab=22.85 E-value=3.2e+02 Score=20.12 Aligned_cols=45 Identities=22% Similarity=0.354 Sum_probs=26.9
Q ss_pred HHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHH-HHHHHhCCc
Q 021158 41 RNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLI-GLLDKLGIH 93 (316)
Q Consensus 41 ~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 93 (316)
...+..|.+.|+.++-+.. |+- . ...+.+++++.+. .+++.+|.+
T Consensus 129 ~~Nl~~L~~~G~~ii~P~~-g~~--~-----~p~~~~~~~~~i~~~~l~~lg~~ 174 (181)
T TIGR00421 129 LENMLRLSRMGAIILPPMP-AFY--T-----RPKSVEDMIDFIVGRVLDQLGIE 174 (181)
T ss_pred HHHHHHHHHCCCEEECCCC-ccc--C-----CCCCHHHHHHHHHHHHHHHcCCC
Confidence 3445678888998877653 331 1 2336777666554 566677654
No 442
>PF00578 AhpC-TSA: AhpC/TSA family; InterPro: IPR000866 Peroxiredoxins (Prxs) are a ubiquitous family of antioxidant enzymes that also control cytokine-induced peroxide levels which mediate signal transduction in mammalian cells. Prxs can be regulated by changes to phosphorylation, redox and possibly oligomerisation states. Prxs are divided into three classes: typical 2-Cys Prxs; atypical 2-Cys Prxs; and 1-Cys Prxs. All Prxs share the same basic catalytic mechanism, in which an active-site cysteine (the peroxidatic cysteine) is oxidised to a sulphenic acid by the peroxide substrate. The recycling of the sulphenic acid back to a thiol is what distinguishes the three enzyme classes. Using crystal structures, a detailed catalytic cycle has been derived for typical 2-Cys Prxs, including a model for the redox-regulated oligomeric state proposed to control enzyme activity []. Alkyl hydroperoxide reductase (AhpC) is responsible for directly reducing organic hyperoxides in its reduced dithiol form. Thiol specific antioxidant (TSA) is a physiologically important antioxidant which constitutes an enzymatic defence against sulphur-containing radicals. This family contains AhpC and TSA, as well as related proteins.; GO: 0016209 antioxidant activity, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1QMV_A 1PRX_B 3HJP_C 3HA9_A 2V41_G 2V32_C 2V2G_C 3LWA_A 3IA1_B 1ZYE_G ....
Probab=22.71 E-value=1e+02 Score=20.36 Aligned_cols=50 Identities=14% Similarity=0.216 Sum_probs=29.9
Q ss_pred EeCCeeEEEEEeCCCCeEEEEccCCCchhh------hHHhhhhhhcCCceEEccCC
Q 021158 10 ATNGINMHVASIGTGPAVLFIHGFPELWYS------WRNQLLYLSSRGYRAIAPDL 59 (316)
Q Consensus 10 ~~~g~~l~~~~~g~~p~il~~HG~~~~~~~------~~~~~~~l~~~g~~v~~~D~ 59 (316)
+.+|.++.......+|+||++-....+..+ +..+...+.+.|..++.+..
T Consensus 12 ~~~g~~~~l~~l~gk~~vl~f~~~~~c~~c~~~l~~l~~~~~~~~~~~~~vi~is~ 67 (124)
T PF00578_consen 12 DSDGKTVSLSDLKGKPVVLFFWPTAWCPFCQAELPELNELYKKYKDKGVQVIGIST 67 (124)
T ss_dssp TTTSEEEEGGGGTTSEEEEEEESTTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEES
T ss_pred CCCCCEEEHHHHCCCcEEEEEeCccCccccccchhHHHHHhhhhccceEEeeeccc
Confidence 446777776666446766666555222222 34445566677888888763
No 443
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=22.69 E-value=3.7e+02 Score=21.13 Aligned_cols=39 Identities=26% Similarity=0.330 Sum_probs=32.1
Q ss_pred CCeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCC
Q 021158 24 GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGY 62 (316)
Q Consensus 24 ~p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~ 62 (316)
+.+|++=-|...+.+.|...++.+.+.|-.=+.+-.||.
T Consensus 122 gkPVilk~G~~~t~~e~~~A~e~i~~~Gn~~i~L~eRg~ 160 (250)
T PRK13397 122 DKPILFKRGLMATIEEYLGALSYLQDTGKSNIILCERGV 160 (250)
T ss_pred CCeEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEcccc
Confidence 678999999999999999999999988875455555665
No 444
>PF11009 DUF2847: Protein of unknown function (DUF2847); InterPro: IPR022551 Members of this protein family, including YtxJ from Bacillus subtilis, occur in species that encode proteins for synthesizing bacillithiol. The protein is described as thioredoxin-like, while another bacillithiol-associated protein, YpdA (TIGR04018 from TIGRFAMS), is described as thioredoxin reductase-like. ; PDB: 3IV4_A.
Probab=22.53 E-value=2.4e+02 Score=18.59 Aligned_cols=35 Identities=14% Similarity=-0.002 Sum_probs=24.0
Q ss_pred HHHHHHHHHHhCCcceEEEEecHHHHHHHHHHhhc
Q 021158 80 VGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFR 114 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 114 (316)
.+++.++++.-..++++++=||.-+.+...+-.++
T Consensus 7 ~eql~~i~~~S~~~~~~iFKHSt~C~IS~~a~~~~ 41 (105)
T PF11009_consen 7 EEQLEEILEESKEKPVLIFKHSTRCPISAMALREF 41 (105)
T ss_dssp HHHHHHHHHH---SEEEEEEE-TT-HHHHHHHHHH
T ss_pred HHHHHHHHHhcccCcEEEEEeCCCChhhHHHHHHH
Confidence 45777888877777999999999998888776654
No 445
>PLN00416 carbonate dehydratase
Probab=22.49 E-value=1.3e+02 Score=23.70 Aligned_cols=33 Identities=12% Similarity=0.171 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHhCCcceEEEEecHHHHHHHHHH
Q 021158 79 LVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFC 111 (316)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a 111 (316)
....|...+..++.+.|+++|||-=|.+...+.
T Consensus 126 ~~asLEyAv~~L~V~~IVV~GHs~CGaV~Aa~~ 158 (258)
T PLN00416 126 VGAAVEYAVVHLKVENILVIGHSCCGGIKGLMS 158 (258)
T ss_pred chhHHHHHHHHhCCCEEEEecCCCchHHHHHHh
Confidence 445678888899999999999997666555443
No 446
>PRK00091 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed
Probab=22.47 E-value=3.3e+02 Score=22.14 Aligned_cols=64 Identities=19% Similarity=0.260 Sum_probs=35.3
Q ss_pred CeEEEEccCCCchhhhHHhhhhhhcC-CceEEccCCCC------CCCCCCCC---------------CCcchhHHHHHHH
Q 021158 25 PAVLFIHGFPELWYSWRNQLLYLSSR-GYRAIAPDLRG------YGDTDAPP---------------SVTSYTALHLVGD 82 (316)
Q Consensus 25 p~il~~HG~~~~~~~~~~~~~~l~~~-g~~v~~~D~~G------~G~s~~~~---------------~~~~~~~~~~~~~ 82 (316)
+.+|++-|-.++.-. .++..|++. +..++..|-.- +|.....+ ....++..++.++
T Consensus 4 ~~~i~i~GptgsGKt--~la~~la~~~~~~iis~Ds~Qvy~~l~i~Takp~~~E~~gv~hhlid~~~~~~~~s~~~f~~~ 81 (307)
T PRK00091 4 PKVIVIVGPTASGKT--ALAIELAKRLNGEIISADSMQVYRGMDIGTAKPTAEERAGVPHHLIDILDPTESYSVADFQRD 81 (307)
T ss_pred ceEEEEECCCCcCHH--HHHHHHHHhCCCcEEeccccceeecccccCCCCCHHHHcCccEEeecccChhhcccHHHHHHH
Confidence 567888887766543 233334333 45677777531 11111111 1135678888888
Q ss_pred HHHHHHHh
Q 021158 83 LIGLLDKL 90 (316)
Q Consensus 83 ~~~~~~~~ 90 (316)
....++..
T Consensus 82 a~~~i~~i 89 (307)
T PRK00091 82 ALAAIADI 89 (307)
T ss_pred HHHHHHHH
Confidence 88888765
No 447
>TIGR03569 NeuB_NnaB N-acetylneuraminate synthase. This family is a subset of the Pfam model pfam03102 and is believed to include only authentic NeuB N-acetylneuraminate (sialic acid) synthase enzymes. The majority of the genes identified by this model are observed adjacent to both the NeuA and NeuC genes which together effect the biosynthesis of CMP-N-acetylneuraminate from UDP-N-acetylglucosamine.
Probab=22.07 E-value=4e+02 Score=22.00 Aligned_cols=79 Identities=14% Similarity=0.093 Sum_probs=46.4
Q ss_pred CCeEEEEccCCCchhhhHHhhhhhhcCCce---EEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCcceEEEEe
Q 021158 24 GPAVLFIHGFPELWYSWRNQLLYLSSRGYR---AIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGH 100 (316)
Q Consensus 24 ~p~il~~HG~~~~~~~~~~~~~~l~~~g~~---v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 100 (316)
+.|||+--|+ ++...|...++.+.+.|.. ++..-.- |.-+......+. ..+..+-+..+ -+|.+-+|
T Consensus 133 gkPvilStGm-atl~Ei~~Av~~i~~~G~~~~~i~llhC~----s~YP~~~~~~nL----~~I~~Lk~~f~-~pVG~SdH 202 (329)
T TIGR03569 133 GKPVILSTGM-ATLEEIEAAVGVLRDAGTPDSNITLLHCT----TEYPAPFEDVNL----NAMDTLKEAFD-LPVGYSDH 202 (329)
T ss_pred CCcEEEECCC-CCHHHHHHHHHHHHHcCCCcCcEEEEEEC----CCCCCCcccCCH----HHHHHHHHHhC-CCEEECCC
Confidence 5689999998 5888899999999887754 4333311 211111122222 23333334444 47777899
Q ss_pred cHHHHHHHHHHh
Q 021158 101 DWGALIAWYFCL 112 (316)
Q Consensus 101 S~Gg~~a~~~a~ 112 (316)
+.|-.++..+.+
T Consensus 203 t~G~~~~~aAva 214 (329)
T TIGR03569 203 TLGIEAPIAAVA 214 (329)
T ss_pred CccHHHHHHHHH
Confidence 999655544443
No 448
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=21.93 E-value=5.5e+02 Score=22.57 Aligned_cols=61 Identities=20% Similarity=0.279 Sum_probs=36.1
Q ss_pred CCeEEEEccCCCc---hhhhHHhhhhhhcCCceEEccCCCC----CCCCCCCCCCcchhHHHHHHHHHHHHH
Q 021158 24 GPAVLFIHGFPEL---WYSWRNQLLYLSSRGYRAIAPDLRG----YGDTDAPPSVTSYTALHLVGDLIGLLD 88 (316)
Q Consensus 24 ~p~il~~HG~~~~---~~~~~~~~~~l~~~g~~v~~~D~~G----~G~s~~~~~~~~~~~~~~~~~~~~~~~ 88 (316)
+.++|+++..... .......+..|.+.|+.|+-++. | +|..... .-...++.+..+..++.
T Consensus 180 ~~PvliaPaMN~~M~~npat~~Nl~~L~~~G~~vi~P~~-g~lA~~g~~G~G---rm~e~~~I~~~v~~~~~ 247 (475)
T PRK13982 180 NRPILLAPAMNPLMWNNPATRRNVAQLKRDGVHMIGPNA-GEMAERGEAGVG---RMAEPLEIAAAAEALLR 247 (475)
T ss_pred CCCEEEEEcCCHHHhcCHHHHHHHHHHHHCCCEEECCCC-CccccCCCcCCC---CCCCHHHHHHHHHHHHh
Confidence 3567777765443 22334566788888999987764 2 2332221 23356667777766663
No 449
>PRK15180 Vi polysaccharide biosynthesis protein TviD; Provisional
Probab=21.85 E-value=2.8e+02 Score=24.19 Aligned_cols=78 Identities=17% Similarity=0.181 Sum_probs=54.0
Q ss_pred CeEEEEccCCCch-hhhHHhhhhhhcCCceEEccCCCCCCCCCCCC-------C----------------CcchhHHHHH
Q 021158 25 PAVLFIHGFPELW-YSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPP-------S----------------VTSYTALHLV 80 (316)
Q Consensus 25 p~il~~HG~~~~~-~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~-------~----------------~~~~~~~~~~ 80 (316)
.-.+.+-|+.-.. .....+.+.|...+.+.+-+++++-|.-.... . -...+-.+.-
T Consensus 97 qKkl~~dG~~LQ~NyVvrHF~Effsd~~R~~mfWSLa~Ad~raqRlAYL~ddP~FAgLs~D~r~lLs~ivvrq~teaEIE 176 (831)
T PRK15180 97 QKKIMAYGFCLQINYLTRHFYEFFSQTERACMYWSLATQGNRHKLLAYLKDDPCFAGMSEDDRALLSNINVEQMDEHAIE 176 (831)
T ss_pred eeeEEeccchhhHHHHHHHHHHHhhhcchhhhhhhcccccchhHHHHHhhcChhhhhhhHhHHHHHHhhHhhcccHHHHH
Confidence 4577778876544 34566778888888888888998887654311 0 0122455566
Q ss_pred HHHHHHHHHhCCcceEEEEecH
Q 021158 81 GDLIGLLDKLGIHQVFLVGHDW 102 (316)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~G~S~ 102 (316)
+|+.++...+|.+++.++-|.-
T Consensus 177 eDmmeIVqLLGk~rVvfVTHVN 198 (831)
T PRK15180 177 QDMMEIVQLLGRDRVMFMTHVD 198 (831)
T ss_pred HHHHHHHHHhCCCcEEEEEeec
Confidence 7888888889988999999974
No 450
>cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.
Probab=21.76 E-value=1.2e+02 Score=18.48 Aligned_cols=30 Identities=23% Similarity=0.194 Sum_probs=19.6
Q ss_pred EEccCCCchhh--hHHhhhhhhcCCceEEccC
Q 021158 29 FIHGFPELWYS--WRNQLLYLSSRGYRAIAPD 58 (316)
Q Consensus 29 ~~HG~~~~~~~--~~~~~~~l~~~g~~v~~~D 58 (316)
++-|.++.... -..++..|++.|++|..+|
T Consensus 3 ~~~g~~G~Gktt~~~~l~~~l~~~g~~v~~~~ 34 (99)
T cd01983 3 VVTGKGGVGKTTLAANLAAALAKRGKRVLLID 34 (99)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHCCCeEEEEC
Confidence 34444433332 3567778888899999998
No 451
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2.4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.
Probab=21.75 E-value=2.8e+02 Score=24.47 Aligned_cols=38 Identities=18% Similarity=0.198 Sum_probs=25.5
Q ss_pred HHHHHHHHH-HHHHHhCCcceEEEEe-cHHHHHHHHHHhh
Q 021158 76 ALHLVGDLI-GLLDKLGIHQVFLVGH-DWGALIAWYFCLF 113 (316)
Q Consensus 76 ~~~~~~~~~-~~~~~~~~~~~~l~G~-S~Gg~~a~~~a~~ 113 (316)
.+++++|+. ++.+.++..|-.++|| |-||.+|..++.+
T Consensus 383 Le~fa~d~~~~i~~e~~~~PdlI~GnYsDgnlvA~LLs~~ 422 (550)
T PF00862_consen 383 LEEFADDAEREILAELQGKPDLIIGNYSDGNLVASLLSRK 422 (550)
T ss_dssp HHHHHHHHHHHHHHHHTS--SEEEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCcEEEeccCcchHHHHHHHhh
Confidence 567777775 4456677778888886 7777777777765
No 452
>PRK03846 adenylylsulfate kinase; Provisional
Probab=21.63 E-value=1.6e+02 Score=21.78 Aligned_cols=37 Identities=22% Similarity=0.106 Sum_probs=24.2
Q ss_pred CCCCeEEEEccCCCchhh--hHHhhhhhhcCCceEEccC
Q 021158 22 GTGPAVLFIHGFPELWYS--WRNQLLYLSSRGYRAIAPD 58 (316)
Q Consensus 22 g~~p~il~~HG~~~~~~~--~~~~~~~l~~~g~~v~~~D 58 (316)
+..|.+|.+.|..++.-+ -..+...|...|..++.+|
T Consensus 21 ~~~~~~i~i~G~~GsGKSTla~~l~~~l~~~~~~~~~ld 59 (198)
T PRK03846 21 GHKGVVLWFTGLSGSGKSTVAGALEEALHELGVSTYLLD 59 (198)
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHhCCCCEEEEc
Confidence 346788888897766543 3445556666677677775
No 453
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=21.62 E-value=4.2e+02 Score=21.04 Aligned_cols=39 Identities=21% Similarity=0.337 Sum_probs=31.2
Q ss_pred CCeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCCCC
Q 021158 24 GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGY 62 (316)
Q Consensus 24 ~p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~ 62 (316)
+.+|++=-|..++.+.|...++.+...|-.=+.+-.||.
T Consensus 134 gkPV~lk~G~~~s~~e~~~A~e~i~~~Gn~~i~L~~rG~ 172 (266)
T PRK13398 134 KKPILLKRGMSATLEEWLYAAEYIMSEGNENVVLCERGI 172 (266)
T ss_pred CCcEEEeCCCCCCHHHHHHHHHHHHhcCCCeEEEEECCC
Confidence 678999999999999999999999877764445556664
No 454
>PRK09004 FMN-binding protein MioC; Provisional
Probab=21.53 E-value=1.9e+02 Score=20.22 Aligned_cols=15 Identities=27% Similarity=0.339 Sum_probs=6.1
Q ss_pred HHHHHHHHHHHhCCc
Q 021158 79 LVGDLIGLLDKLGIH 93 (316)
Q Consensus 79 ~~~~~~~~~~~~~~~ 93 (316)
.++.+.+.++.+|.+
T Consensus 101 ~~~~ld~~l~~lGa~ 115 (146)
T PRK09004 101 AIDKLEQLLKAKGAK 115 (146)
T ss_pred HHHHHHHHHHHcCCe
Confidence 333444444444433
No 455
>PRK06849 hypothetical protein; Provisional
Probab=21.49 E-value=1.9e+02 Score=24.31 Aligned_cols=61 Identities=10% Similarity=0.118 Sum_probs=37.0
Q ss_pred hHHhhhhhhcCCceEEccCCCCCCCCCC---CC-----CCcchhHHHHHHHHHHHHHHhCCcceEEEEec
Q 021158 40 WRNQLLYLSSRGYRAIAPDLRGYGDTDA---PP-----SVTSYTALHLVGDLIGLLDKLGIHQVFLVGHD 101 (316)
Q Consensus 40 ~~~~~~~l~~~g~~v~~~D~~G~G~s~~---~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S 101 (316)
-..+++.|.+.|++|++.|......+.. .. .....+...+++.+.++++..+. .+++-+.+
T Consensus 17 ~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~i-d~vIP~~e 85 (389)
T PRK06849 17 ALELARLFHNAGHTVILADSLKYPLSRFSRAVDGFYTIPSPRWDPDAYIQALLSIVQRENI-DLLIPTCE 85 (389)
T ss_pred HHHHHHHHHHCCCEEEEEeCCchHHHHHHHhhhheEEeCCCCCCHHHHHHHHHHHHHHcCC-CEEEECCh
Confidence 3467788888999999998764332211 00 00123456678888888888774 33344443
No 456
>PRK07053 glutamine amidotransferase; Provisional
Probab=21.45 E-value=3.9e+02 Score=20.63 Aligned_cols=33 Identities=18% Similarity=0.048 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHhCCcceEEEEecHHHHHHHHHH
Q 021158 79 LVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFC 111 (316)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a 111 (316)
+.....++++..-...+-++|.|+|..+...+.
T Consensus 68 ~~~~~~~~i~~~~~~~~PvlGIC~G~Qlla~al 100 (234)
T PRK07053 68 FLAPEIALLRQRLAAGLPTLGICLGAQLIARAL 100 (234)
T ss_pred cHHHHHHHHHHHHHCCCCEEEECccHHHHHHHc
Confidence 344555555544223455899999998877665
No 457
>cd01423 MGS_CPS_I_III Methylglyoxal synthase-like domain found in pyr1 and URA1-like carbamoyl phosphate synthetases (CPS), including ammonia-dependent CPS Type I, and glutamine-dependent CPS Type III. These are multidomain proteins, in which MGS is the C-terminal domain.
Probab=21.35 E-value=1.3e+02 Score=19.91 Aligned_cols=22 Identities=23% Similarity=0.030 Sum_probs=17.8
Q ss_pred CchhhhHHhhhhhhcCCceEEc
Q 021158 35 ELWYSWRNQLLYLSSRGYRAIA 56 (316)
Q Consensus 35 ~~~~~~~~~~~~l~~~g~~v~~ 56 (316)
.....+..+++.|.+.||.+++
T Consensus 10 ~dk~~~~~~a~~l~~~G~~i~a 31 (116)
T cd01423 10 YSKPELLPTAQKLSKLGYKLYA 31 (116)
T ss_pred ccchhHHHHHHHHHHCCCEEEE
Confidence 3556778888999999999987
No 458
>PRK14456 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=21.27 E-value=5e+02 Score=21.85 Aligned_cols=75 Identities=13% Similarity=0.075 Sum_probs=45.4
Q ss_pred EEEEccCCCchhhhHHhhhhhhcCC--ceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCcceEEEEecHHH
Q 021158 27 VLFIHGFPELWYSWRNQLLYLSSRG--YRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWGA 104 (316)
Q Consensus 27 il~~HG~~~~~~~~~~~~~~l~~~g--~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg 104 (316)
.+++.|...+.+....+++.+.... .+.+-+..- +.+...+ ...+.++.+.+.++..|+. +.+..|.|.
T Consensus 283 yvLI~GvNDs~eda~~L~~~l~~~~~~VnlIpyn~~--~~~~~~~-----ps~e~i~~F~~~L~~~Gi~--vtvR~~~G~ 353 (368)
T PRK14456 283 YMLLEGINDSPEDARKLIRFASRFFCKINLIDYNSI--VNIKFEP-----VCSSTRERFRDRLLDAGLQ--VTVRKSYGT 353 (368)
T ss_pred EEEEcCCCCCHHHHHHHHHHHhcCCCeeEEeeeccC--CCCCCCC-----CCHHHHHHHHHHHHHCCCc--EEeeCCCCc
Confidence 5888999998888888887776542 444544432 2222111 2233455666666666644 667888887
Q ss_pred HHHHHH
Q 021158 105 LIAWYF 110 (316)
Q Consensus 105 ~~a~~~ 110 (316)
-+...+
T Consensus 354 di~aAC 359 (368)
T PRK14456 354 TINAAC 359 (368)
T ss_pred chhhcC
Confidence 655443
No 459
>TIGR03708 poly_P_AMP_trns polyphosphate:AMP phosphotransferase. Members of this protein family contain a domain duplication. The characterized member from Acinetobacter johnsonii is polyphosphate:AMP phosphotransferase (PAP), which can transfer the terminal phosphate from poly(P) to AMP, yielding ADP. In the opposite direction, this enzyme can synthesize poly(P). Each domain of this protein family is homologous to polyphosphate kinase, an enzyme that can run in the forward direction to extend a polyphosphate chain with a new terminal phosphate from ATP, or in reverse to make ATP (or GTP) from ADP (or GDP).
Probab=21.24 E-value=1.5e+02 Score=25.96 Aligned_cols=39 Identities=15% Similarity=0.150 Sum_probs=31.7
Q ss_pred CCCeEEEEccCCCch--hhhHHhhhhhhcCCceEEccCCCC
Q 021158 23 TGPAVLFIHGFPELW--YSWRNQLLYLSSRGYRAIAPDLRG 61 (316)
Q Consensus 23 ~~p~il~~HG~~~~~--~~~~~~~~~l~~~g~~v~~~D~~G 61 (316)
..|.||++-|+.++. .....+...|..+|++|+++..|.
T Consensus 38 ~~~vlIv~eG~DaaGKg~~I~~l~~~ldprg~~v~~~~~P~ 78 (493)
T TIGR03708 38 GFPVIILIEGWDGAGKGETINLLNEWMDPRGIETHAFGRPS 78 (493)
T ss_pred CCeEEEEEeCCCCCChHHHHHHHHHHhCcCccEEEeCCCCC
Confidence 358999999987654 456788899999999999988764
No 460
>PF04084 ORC2: Origin recognition complex subunit 2 ; InterPro: IPR007220 The Origin Recognition Complex (ORC) is a six-subunit ATP-dependent DNA-binding complex encoded in yeast by ORC1-6 []. ORC is a central component for eukaryotic DNA replication, and binds chromatin at replication origins throughout the cell cycle []. ORC directs DNA replication throughout the genome and is required for its initiation [, , ]. ORC bound at replication origins serves as the foundation for assembly of the pre-replicative complex (pre-RC), which includes Cdc6, Tah11 (aka Cdt1), and the Mcm2-7 complex [, , ]. Pre-RC assembly during G1 is required for replication licensing of chromosomes prior to DNA synthesis during S phase [, , ]. Cell cycle-regulated phosphorylation of Orc2, Orc6, Cdc6, and MCM by the cyclin-dependent protein kinase Cdc28 regulates initiation of DNA replication, including blocking reinitiation in G2/M phase [, , , ]. In yeast, ORC also plays a role in the establishment of silencing at the mating-type loci Hidden MAT Left (HML) and Hidden MAT Right (HMR) [, , ]. ORC participates in the assembly of transcriptionally silent chromatin at HML and HMR by recruiting the Sir1 silencing protein to the HML and HMR silencers [, , ]. Both Orc1 and Orc5 bind ATP, though only Orc1 has ATPase activity []. The binding of ATP by Orc1 is required for ORC binding to DNA and is essential for cell viability []. The ATPase activity of Orc1 is involved in formation of the pre-RC [, , ]. ATP binding by Orc5 is crucial for the stability of ORC as a whole. Only the Orc1-5 subunits are required for origin binding; Orc6 is essential for maintenance of pre-RCs once formed []. Interactions within ORC suggest that Orc2-3-6 may form a core complex []. ORC homologues have been found in various eukaryotes, including fission yeast, insects, amphibians, and humans []. This entry represents subunit 2, which binds the origin of replication. It plays a role in chromosome replication and mating type transcriptional silencing.; GO: 0006260 DNA replication, 0000808 origin recognition complex, 0005634 nucleus
Probab=21.15 E-value=3.8e+02 Score=22.08 Aligned_cols=32 Identities=16% Similarity=0.157 Sum_probs=21.8
Q ss_pred hHHHHHHHHHHHHHHhC-CcceEEEEecHHHHH
Q 021158 75 TALHLVGDLIGLLDKLG-IHQVFLVGHDWGALI 106 (316)
Q Consensus 75 ~~~~~~~~~~~~~~~~~-~~~~~l~G~S~Gg~~ 106 (316)
...+.++.+...++... ..+++|+=|++=|..
T Consensus 118 ~~~~~~~~i~~~l~~~~~~~~l~lvIHnIDg~~ 150 (326)
T PF04084_consen 118 SPSEQLDFIISYLESRPSPPPLYLVIHNIDGPS 150 (326)
T ss_pred CHHHHHHHHHHHHhccCCCCceEEEEECCCChh
Confidence 44555555666666554 568999999988765
No 461
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=21.13 E-value=1.4e+02 Score=24.17 Aligned_cols=51 Identities=16% Similarity=0.058 Sum_probs=28.9
Q ss_pred cccCcEEEEEeCCCcccCCCCcchhcccccccccccCcccEEEEcCCCcccchh-hHHHHHHHHHHHHH
Q 021158 247 QIKVPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQE-KAEEVGAHIYEFIK 314 (316)
Q Consensus 247 ~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~ 314 (316)
.+.+|++.++|..|+..-.. ..++. . ..-+. +.++.+ .|+++.+.+.++|.
T Consensus 270 A~g~p~valfGpt~p~~~~p-------------~~~~~-~-~~~~~--~~cm~~I~~e~V~~~~~~~l~ 321 (322)
T PRK10964 270 ALDRPNITLYGPTDPGLIGG-------------YGKNQ-H-ACRSP--GKSMADLSAETVFQKLETLIS 321 (322)
T ss_pred HhCCCEEEEECCCCcccccC-------------CCCCc-e-eecCC--CcccccCCHHHHHHHHHHHhh
Confidence 66889999999776532111 11111 1 11222 333333 78999999888763
No 462
>PRK14538 putative bifunctional signaling protein/50S ribosomal protein L9; Provisional
Probab=21.04 E-value=2.3e+02 Score=26.92 Aligned_cols=60 Identities=25% Similarity=0.424 Sum_probs=36.1
Q ss_pred CceEEccC----CCCCCCCCCC-CCCcchhHHHHHHHHHHHHHHhCCcceEEEEe------cHHHHHHHHHHh
Q 021158 51 GYRAIAPD----LRGYGDTDAP-PSVTSYTALHLVGDLIGLLDKLGIHQVFLVGH------DWGALIAWYFCL 112 (316)
Q Consensus 51 g~~v~~~D----~~G~G~s~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~------S~Gg~~a~~~a~ 112 (316)
|=.|+.-+ .+-+|..... ...........+..+.++++. .++++++|| |+|+++|+....
T Consensus 323 GDQvvvk~~~~~~~fyGGks~~~eKrtrVraRvia~~L~elI~~--~d~ViI~gH~nPD~DAlGSalaL~~~l 393 (838)
T PRK14538 323 GDQAVVNIENEKIKYFGAKIASLSKQSKVNARVNAQNLVDILKK--NPHCFIMGHNHTDLDSLGSMIAFYKIA 393 (838)
T ss_pred CCEEEEEcCCCCceEeCCCCCcccchhhHHHHHHHHHHHHHHhc--CCeEEEEecCCCCchHHHHHHHHHHHH
Confidence 45555444 2345544332 222334456666666666654 458999998 689999887754
No 463
>smart00500 SFM Splicing Factor Motif, present in Prp18 and Pr04.
Probab=20.95 E-value=1e+02 Score=16.47 Aligned_cols=22 Identities=32% Similarity=0.478 Sum_probs=16.0
Q ss_pred HHHHHHHHhCCcceEEEEecHHH
Q 021158 82 DLIGLLDKLGIHQVFLVGHDWGA 104 (316)
Q Consensus 82 ~~~~~~~~~~~~~~~l~G~S~Gg 104 (316)
++..-+..+| +|+.++|-+-..
T Consensus 5 eV~~~LR~lg-ePi~lFGE~~~~ 26 (44)
T smart00500 5 EVIRRLRELG-EPITLFGEDDQE 26 (44)
T ss_pred HHHHHHHHcC-CCeeecCCChHH
Confidence 5566677777 789999988543
No 464
>PRK04435 hypothetical protein; Provisional
Probab=20.87 E-value=2.2e+02 Score=20.02 Aligned_cols=79 Identities=19% Similarity=0.236 Sum_probs=42.0
Q ss_pred EEeCCCCeEEEEccCCCchhhhHHhhhhhhcCCceEEccCCC--CCCCCCCCCCCcchhHHHHHHHHHHHHHHh----CC
Q 021158 19 ASIGTGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLR--GYGDTDAPPSVTSYTALHLVGDLIGLLDKL----GI 92 (316)
Q Consensus 19 ~~~g~~p~il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~--G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 92 (316)
.+...+..+-+.-........+..+...+++.|.++..++.. ..|...-. -.....+...++.++++.+ |.
T Consensus 62 ~~~~~~r~vtL~i~l~Dr~GlLs~Il~~IA~~~aNIltI~q~i~~~g~a~vs---~tVevs~~~~~L~~Li~~L~~i~gV 138 (147)
T PRK04435 62 DEMVKGKIITLSLLLEDRSGTLSKVLNVIAEAGGNILTINQSIPLQGRANVT---ISIDTSSMEGDIDELLEKLRNLDGV 138 (147)
T ss_pred cccCCCcEEEEEEEEecCCCHHHHHHHHHHHcCCCeEEEEEEcCCCCEEEEE---EEEEeCChHHHHHHHHHHHHcCCCc
Confidence 333334444333334445567888899999999999988652 11211100 1122223333455555544 55
Q ss_pred cceEEEEe
Q 021158 93 HQVFLVGH 100 (316)
Q Consensus 93 ~~~~l~G~ 100 (316)
.++-++|.
T Consensus 139 ~~V~i~~~ 146 (147)
T PRK04435 139 EKVELIGM 146 (147)
T ss_pred EEEEEEec
Confidence 67777774
No 465
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=20.85 E-value=71 Score=25.81 Aligned_cols=17 Identities=29% Similarity=0.356 Sum_probs=14.8
Q ss_pred EEEEecHHHHHHHHHHh
Q 021158 96 FLVGHDWGALIAWYFCL 112 (316)
Q Consensus 96 ~l~G~S~Gg~~a~~~a~ 112 (316)
.+.|.|.||.+|+.++.
T Consensus 45 li~GTStGgiiA~~l~~ 61 (309)
T cd07216 45 LIGGTSTGGLIAIMLGR 61 (309)
T ss_pred eeeeccHHHHHHHHhcc
Confidence 57799999999998874
No 466
>PLN03014 carbonic anhydrase
Probab=20.78 E-value=1.2e+02 Score=24.87 Aligned_cols=32 Identities=13% Similarity=0.127 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHhCCcceEEEEecHHHHHHHHH
Q 021158 79 LVGDLIGLLDKLGIHQVFLVGHDWGALIAWYF 110 (316)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~ 110 (316)
....|...+..++.+.|+++|||-=|.+...+
T Consensus 206 v~asLEYAV~~L~V~~IVV~GHs~CGaV~Aa~ 237 (347)
T PLN03014 206 VGAAIEYAVLHLKVENIVVIGHSACGGIKGLM 237 (347)
T ss_pred chhHHHHHHHHhCCCEEEEeCCCCchHHHHHH
Confidence 45677888899999999999999655544433
No 467
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=20.66 E-value=2.1e+02 Score=23.33 Aligned_cols=43 Identities=12% Similarity=0.132 Sum_probs=30.9
Q ss_pred eEEEEcc-------CCCchhhhHHhhhhhhcCCceEEccCCCCCCCCCCCC
Q 021158 26 AVLFIHG-------FPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPP 69 (316)
Q Consensus 26 ~il~~HG-------~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~ 69 (316)
.|+++|+ +.-+.+.|..+++.+..+ .....+|....|..+..+
T Consensus 179 si~iLhaCAhNPTGmDPT~EQW~qia~vik~k-~lf~fFDiAYQGfASGD~ 228 (410)
T KOG1412|consen 179 SIIILHACAHNPTGMDPTREQWKQIADVIKSK-NLFPFFDIAYQGFASGDL 228 (410)
T ss_pred cEEeeeccccCCCCCCCCHHHHHHHHHHHHhc-CceeeeehhhcccccCCc
Confidence 6788885 344678899999988876 566677777667665554
No 468
>TIGR03127 RuMP_HxlB 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.
Probab=20.65 E-value=2.1e+02 Score=20.72 Aligned_cols=32 Identities=13% Similarity=0.124 Sum_probs=22.9
Q ss_pred EEEEccCCCchhhhHHhhhhhhcCCceEEccC
Q 021158 27 VLFIHGFPELWYSWRNQLLYLSSRGYRAIAPD 58 (316)
Q Consensus 27 il~~HG~~~~~~~~~~~~~~l~~~g~~v~~~D 58 (316)
-|++.|.|.+...-..+...|...|..+..++
T Consensus 32 ~I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~ 63 (179)
T TIGR03127 32 RIFVAGAGRSGLVGKAFAMRLMHLGFNVYVVG 63 (179)
T ss_pred EEEEEecCHHHHHHHHHHHHHHhCCCeEEEeC
Confidence 57888888776655666666777788777764
No 469
>PRK06696 uridine kinase; Validated
Probab=20.61 E-value=1.8e+02 Score=22.11 Aligned_cols=35 Identities=20% Similarity=0.100 Sum_probs=25.6
Q ss_pred CCCCeEEEEccCCCchhhh--HHhhhhhhcCCceEEc
Q 021158 22 GTGPAVLFIHGFPELWYSW--RNQLLYLSSRGYRAIA 56 (316)
Q Consensus 22 g~~p~il~~HG~~~~~~~~--~~~~~~l~~~g~~v~~ 56 (316)
+++|.||.+-|.+++.-+. ..++..|.+.|..|+.
T Consensus 19 ~~~~~iI~I~G~sgsGKSTlA~~L~~~l~~~g~~v~~ 55 (223)
T PRK06696 19 LTRPLRVAIDGITASGKTTFADELAEEIKKRGRPVIR 55 (223)
T ss_pred CCCceEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEE
Confidence 3468999999998876553 4566777766777766
No 470
>TIGR02683 upstrm_HI1419 probable addiction module killer protein. Members of this strictly bacterial protein family are small, at roughly 100 amino acids. The gene is almost invariably the upstream member of a gene pair, where the downstream member is a predicted DNA-binding protein from a clade within Pfam helix-turn-helix family pfam01381. These gene pairs, when found on the bacterial chromosome, often are located with prophage regions, but also in both integrated plasmid regions and near housekeeping genes. Analysis suggests that the gene pair may serve as an addiction module.
Probab=20.58 E-value=2e+02 Score=18.25 Aligned_cols=21 Identities=14% Similarity=0.170 Sum_probs=14.1
Q ss_pred CeeEEEEEeCCCCeEEEEccCC
Q 021158 13 GINMHVASIGTGPAVLFIHGFP 34 (316)
Q Consensus 13 g~~l~~~~~g~~p~il~~HG~~ 34 (316)
+.++.|... ++..+|++||+-
T Consensus 57 ~yRiif~~~-~~~~vvll~gf~ 77 (95)
T TIGR02683 57 GYRVYFTQR-GKVIILLLCGGD 77 (95)
T ss_pred CEEEEEEEE-CCEEEEEEeCEe
Confidence 566655554 455788999875
No 471
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=20.39 E-value=1.6e+02 Score=24.05 Aligned_cols=87 Identities=16% Similarity=0.110 Sum_probs=47.6
Q ss_pred hhHHhhhhhhcCCceEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCcceEEEEecHHH--HHHHHHHhhchh
Q 021158 39 SWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWGA--LIAWYFCLFRPD 116 (316)
Q Consensus 39 ~~~~~~~~l~~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg--~~a~~~a~~~p~ 116 (316)
.|..+.+.+..+++.---.=++.+|..-... .......-...+..++......+++|+|-|-== -+=..++.++|+
T Consensus 226 ~f~~L~efi~~~~~P~GPl~L~~~g~~~~~i--~~sga~rK~~~l~nil~~~p~~kfvLVGDsGE~DpeIYae~v~~fP~ 303 (373)
T COG4850 226 LFPTLQEFITNRNFPYGPLLLRRWGGVLDNI--IESGAARKGQSLRNILRRYPDRKFVLVGDSGEHDPEIYAEMVRCFPN 303 (373)
T ss_pred hHHHHHHHHhcCCCCCCchhHhhcCCccccc--ccchhhhcccHHHHHHHhCCCceEEEecCCCCcCHHHHHHHHHhCcc
Confidence 3445555555555543333334343211110 111222233455667788888899999988221 344456678999
Q ss_pred HHhhhhhccCC
Q 021158 117 RVKALVNMSVP 127 (316)
Q Consensus 117 ~v~~~il~~~~ 127 (316)
+|.++..=+..
T Consensus 304 RIl~I~IRdvs 314 (373)
T COG4850 304 RILGIYIRDVS 314 (373)
T ss_pred ceeeEeeeecc
Confidence 98888655543
No 472
>PLN02154 carbonic anhydrase
Probab=20.28 E-value=1.4e+02 Score=23.84 Aligned_cols=32 Identities=19% Similarity=0.170 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHhCCcceEEEEecHHHHHHHHH
Q 021158 79 LVGDLIGLLDKLGIHQVFLVGHDWGALIAWYF 110 (316)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~ 110 (316)
....+...+..++.+.|+++|||-=|.+...+
T Consensus 152 ~~aslEyAv~~L~v~~IvV~GHs~CGAV~Aal 183 (290)
T PLN02154 152 TNSALEFAVTTLQVENIIVMGHSNCGGIAALM 183 (290)
T ss_pred hhhHHHHHHHHhCCCEEEEecCCCchHHHHHH
Confidence 45567788889999999999999755555544
No 473
>PRK10319 N-acetylmuramoyl-l-alanine amidase I; Provisional
Probab=20.26 E-value=2.3e+02 Score=22.77 Aligned_cols=41 Identities=24% Similarity=0.366 Sum_probs=23.0
Q ss_pred CceEEccCCCCCCCCCCCCCC-cchh----HHHHHHHHHHHHHHhCC
Q 021158 51 GYRAIAPDLRGYGDTDAPPSV-TSYT----ALHLVGDLIGLLDKLGI 92 (316)
Q Consensus 51 g~~v~~~D~~G~G~s~~~~~~-~~~~----~~~~~~~~~~~~~~~~~ 92 (316)
+-.+|++| ||||..++.... .... .-+++..+.+.++..|.
T Consensus 55 ~~~~IvID-pGHGG~DpGAvg~~G~~EKdi~L~IA~~l~~~L~~~G~ 100 (287)
T PRK10319 55 GKRVVMLD-PGHGGIDTGAIGRNGSKEKHVVLAIAKNVRSILRNHGI 100 (287)
T ss_pred CCeEEEEE-CCCCCCCCCCcCCCCCcHHHHHHHHHHHHHHHHHHCCC
Confidence 45688888 899987654321 1112 23344555566665543
No 474
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=20.21 E-value=5.3e+02 Score=21.69 Aligned_cols=37 Identities=24% Similarity=0.272 Sum_probs=24.7
Q ss_pred HHhCCcceEEEEec-HHHHHHHHHHhhchhHHhhhhhccCC
Q 021158 88 DKLGIHQVFLVGHD-WGALIAWYFCLFRPDRVKALVNMSVP 127 (316)
Q Consensus 88 ~~~~~~~~~l~G~S-~Gg~~a~~~a~~~p~~v~~~il~~~~ 127 (316)
+.+...++.++|.. .|+.++..++..- +..+++++.-
T Consensus 131 ~~l~~~~VlvvG~GG~Gs~ia~~La~~G---vg~i~lvD~d 168 (376)
T PRK08762 131 RRLLEARVLLIGAGGLGSPAALYLAAAG---VGTLGIVDHD 168 (376)
T ss_pred HHHhcCcEEEECCCHHHHHHHHHHHHcC---CCeEEEEeCC
Confidence 34455689999875 6677777666543 5677777754
No 475
>PRK13753 dihydropteroate synthase; Provisional
Probab=20.14 E-value=2.6e+02 Score=22.33 Aligned_cols=59 Identities=24% Similarity=0.304 Sum_probs=30.8
Q ss_pred hhhcCCc--eEEccCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCcceEEEEecHHHHHHHHH
Q 021158 46 YLSSRGY--RAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYF 110 (316)
Q Consensus 46 ~l~~~g~--~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~ 110 (316)
.+.+.|. .=+.+| ||.|...... ...+ -.+.+.+..+...+| ..+|+|+|-=+++.-.+
T Consensus 159 ~~~~~Gi~~~~IilD-PGiGF~k~k~--~~~n-~~ll~~l~~l~~~~g--~PvLvg~SRKsfig~~~ 219 (279)
T PRK13753 159 ALRRSGVAADRLILD-PGMGFFLSPA--PETS-LHVLSNLQKLKSALG--LPLLVSVSRKSFLGATV 219 (279)
T ss_pred HHHHcCCChhhEEEe-CCCCCCCCCC--hHHH-HHHHHhHHHHHHhCC--CceEEEccHhHHHHHHc
Confidence 3445565 246677 6888632111 1112 223344444433344 56899999888876443
No 476
>cd03378 beta_CA_cladeC Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=20.08 E-value=1.6e+02 Score=21.01 Aligned_cols=31 Identities=26% Similarity=0.396 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHhCCcceEEEEecHHHHHHHH
Q 021158 79 LVGDLIGLLDKLGIHQVFLVGHDWGALIAWY 109 (316)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~ 109 (316)
....+...+..++.+.++++|||-=|.+...
T Consensus 78 ~~~sl~yav~~l~v~~IvV~GHt~CG~~~a~ 108 (154)
T cd03378 78 VLGSLEYAVEVLGVPLVVVLGHESCGAVAAA 108 (154)
T ss_pred HHHHHHHHHHHhCCCEEEEEcCCCccHHHHH
Confidence 5667778888899999999999985544443
No 477
>PLN02748 tRNA dimethylallyltransferase
Probab=20.06 E-value=5.8e+02 Score=22.40 Aligned_cols=76 Identities=18% Similarity=0.173 Sum_probs=42.9
Q ss_pred CCeEEEEccCCCchhhhHHhhhhhhcC-CceEEccCC----CCC--CCCCCC---------------CCCcchhHHHHHH
Q 021158 24 GPAVLFIHGFPELWYSWRNQLLYLSSR-GYRAIAPDL----RGY--GDTDAP---------------PSVTSYTALHLVG 81 (316)
Q Consensus 24 ~p~il~~HG~~~~~~~~~~~~~~l~~~-g~~v~~~D~----~G~--G~s~~~---------------~~~~~~~~~~~~~ 81 (316)
.+.+|+|-|-.++.-+- ++-.|+.+ +..|+..|- +|. |....+ .....|+..++.+
T Consensus 21 ~~~~i~i~GptgsGKs~--la~~la~~~~~eii~~DsmQVYrgLdIgTaKpt~eE~~~VpHHLid~v~p~e~ysv~~F~~ 98 (468)
T PLN02748 21 KAKVVVVMGPTGSGKSK--LAVDLASHFPVEIINADSMQVYSGLDVLTNKVPLHEQKGVPHHLLGVISPSVEFTAKDFRD 98 (468)
T ss_pred CCCEEEEECCCCCCHHH--HHHHHHHhcCeeEEcCchheeeCCcchhcCCCCHHHHcCCCCeeEeecCCCCcCcHHHHHH
Confidence 45678888876655432 22233333 456888873 221 111111 0125788999999
Q ss_pred HHHHHHHHhC--CcceEEEEec
Q 021158 82 DLIGLLDKLG--IHQVFLVGHD 101 (316)
Q Consensus 82 ~~~~~~~~~~--~~~~~l~G~S 101 (316)
+....++.+. .+-.+|+|.|
T Consensus 99 ~A~~~I~~I~~rgk~PIlVGGT 120 (468)
T PLN02748 99 HAVPLIEEILSRNGLPVIVGGT 120 (468)
T ss_pred HHHHHHHHHHhcCCCeEEEcCh
Confidence 9998888762 2345566654
Done!