Query 021159
Match_columns 316
No_of_seqs 126 out of 1251
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 13:36:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021159.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021159hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gjz_A Lysine-specific demethy 100.0 2.1E-49 7.2E-54 353.6 15.4 231 20-309 1-234 (235)
2 3al5_A HTYW5, JMJC domain-cont 100.0 1.2E-44 3.9E-49 341.9 13.2 242 11-312 19-276 (338)
3 3d8c_A Hypoxia-inducible facto 100.0 1.6E-42 5.3E-47 328.5 11.4 257 10-312 31-300 (349)
4 3k2o_A Bifunctional arginine d 100.0 8.1E-41 2.8E-45 314.2 11.8 236 18-311 43-291 (336)
5 2yu1_A JMJC domain-containing 100.0 2.9E-31 1E-35 256.5 8.9 221 19-310 51-300 (451)
6 1vrb_A Putative asparaginyl hy 100.0 7.1E-29 2.4E-33 234.1 12.0 220 20-307 19-251 (342)
7 3k3o_A PHF8, PHD finger protei 99.9 1E-27 3.6E-32 225.6 12.1 224 15-309 11-250 (371)
8 3kv5_D JMJC domain-containing 99.9 2.6E-27 9.1E-32 231.7 14.0 214 20-311 136-371 (488)
9 3kv9_A JMJC domain-containing 99.9 1.1E-26 3.8E-31 220.4 16.0 211 21-309 46-278 (397)
10 3pua_A GRC5, PHD finger protei 99.9 5.2E-27 1.8E-31 222.1 12.4 231 8-311 31-279 (392)
11 3kv4_A PHD finger protein 8; e 99.9 1.3E-26 4.6E-31 223.8 10.0 210 22-309 103-334 (447)
12 2xdv_A MYC-induced nuclear ant 99.8 1.6E-21 5.6E-26 189.0 8.0 193 26-298 23-222 (442)
13 4diq_A Lysine-specific demethy 99.8 2E-19 6.8E-24 174.4 16.6 91 163-298 159-251 (489)
14 3pur_A Lysine-specific demethy 99.7 3.6E-17 1.2E-21 159.0 12.3 210 29-309 151-399 (528)
15 2ypd_A Probable JMJC domain-co 99.0 3.9E-11 1.3E-15 112.2 0.8 138 30-197 23-193 (392)
16 2xxz_A Lysine-specific demethy 98.0 7.6E-05 2.6E-09 69.0 13.7 100 169-303 201-306 (332)
17 3avr_A Lysine-specific demethy 97.9 6.3E-05 2.2E-09 73.7 10.5 102 169-303 260-365 (531)
18 4ask_A Lysine-specific demethy 97.4 0.0025 8.7E-08 61.6 14.7 101 169-302 235-339 (510)
19 3dxt_A JMJC domain-containing 96.8 0.002 7E-08 59.9 6.5 113 169-309 176-295 (354)
20 3opt_A DNA damage-responsive t 95.9 0.011 3.8E-07 55.2 6.0 111 169-309 219-338 (373)
21 2ox0_A JMJC domain-containing 95.2 0.028 9.6E-07 52.8 6.2 112 169-308 194-312 (381)
22 3fz3_A Prunin; TREE NUT allerg 93.8 0.066 2.2E-06 52.4 5.4 36 170-206 396-432 (531)
23 3kgl_A Cruciferin; 11S SEED gl 93.1 0.11 3.6E-06 50.4 5.5 67 170-301 325-393 (466)
24 3ksc_A LEGA class, prolegumin; 93.0 0.12 4.2E-06 50.3 5.9 68 170-302 360-429 (496)
25 2e9q_A 11S globulin subunit be 93.0 0.11 3.7E-06 50.2 5.5 62 172-297 326-389 (459)
26 1fxz_A Glycinin G1; proglycini 92.3 0.17 5.8E-06 49.1 5.9 24 274-297 381-405 (476)
27 3c3v_A Arachin ARAH3 isoform; 92.1 0.18 6.1E-06 49.3 5.8 23 275-297 416-439 (510)
28 3qac_A 11S globulin SEED stora 91.5 0.22 7.6E-06 48.1 5.7 35 172-207 327-362 (465)
29 2y0o_A Probable D-lyxose ketol 91.2 0.64 2.2E-05 38.9 7.5 25 273-297 116-141 (175)
30 2d5f_A Glycinin A3B4 subunit; 90.8 0.27 9.2E-06 47.9 5.5 33 172-205 371-404 (493)
31 3ejk_A DTDP sugar isomerase; Y 90.6 0.64 2.2E-05 38.8 7.0 36 170-205 54-90 (174)
32 1zvf_A 3-hydroxyanthranilate 3 90.1 0.97 3.3E-05 37.6 7.5 75 169-305 34-109 (176)
33 3nw4_A Gentisate 1,2-dioxygena 89.9 0.26 9E-06 46.1 4.4 25 274-299 140-165 (368)
34 1yfu_A 3-hydroxyanthranilate-3 89.1 1.3 4.5E-05 36.9 7.5 35 169-203 35-69 (174)
35 3bu7_A Gentisate 1,2-dioxygena 89.0 1.2 4E-05 42.1 8.2 23 275-297 331-354 (394)
36 2o8q_A Hypothetical protein; c 88.9 0.94 3.2E-05 35.2 6.5 22 276-297 83-105 (134)
37 1dgw_A Canavalin; duplicated s 88.5 0.26 8.8E-06 41.1 3.0 23 276-299 83-106 (178)
38 2fqp_A Hypothetical protein BP 88.4 1.1 3.7E-05 32.9 6.2 24 276-300 59-83 (97)
39 1lr5_A Auxin binding protein 1 88.4 2.4 8.1E-05 34.2 8.8 29 176-204 48-76 (163)
40 3h8u_A Uncharacterized conserv 88.3 1.3 4.6E-05 33.7 6.9 22 277-299 80-102 (125)
41 3lag_A Uncharacterized protein 88.1 0.1 3.5E-06 39.2 0.2 34 276-310 59-95 (98)
42 1uij_A Beta subunit of beta co 88.1 0.42 1.5E-05 45.5 4.6 76 172-298 253-330 (416)
43 2phl_A Phaseolin; plant SEED s 87.9 0.36 1.2E-05 45.7 3.8 27 273-299 287-314 (397)
44 2vqa_A SLL1358 protein, MNCA; 87.7 0.85 2.9E-05 42.0 6.3 23 276-299 96-119 (361)
45 3bu7_A Gentisate 1,2-dioxygena 87.7 1 3.5E-05 42.5 6.9 23 275-298 161-184 (394)
46 2ozj_A Cupin 2, conserved barr 87.5 2.6 9E-05 31.5 8.1 26 276-302 76-102 (114)
47 2d40_A Z3393, putative gentisa 87.2 1.5 5.1E-05 40.6 7.7 25 276-301 306-331 (354)
48 1nxm_A DTDP-6-deoxy-D-XYLO-4-h 87.2 0.8 2.7E-05 39.0 5.3 31 274-304 107-138 (197)
49 3ibm_A Cupin 2, conserved barr 86.9 3.2 0.00011 33.9 8.8 22 277-299 95-117 (167)
50 4e2g_A Cupin 2 conserved barre 86.4 1.7 5.9E-05 33.1 6.5 24 277-301 80-104 (126)
51 3ryk_A DTDP-4-dehydrorhamnose 86.3 1.9 6.4E-05 36.9 7.1 31 169-199 69-104 (205)
52 3kgz_A Cupin 2 conserved barre 86.2 2.2 7.7E-05 34.5 7.4 22 277-299 83-105 (156)
53 1yhf_A Hypothetical protein SP 86.2 2 6.7E-05 32.1 6.6 24 277-301 79-103 (115)
54 1x82_A Glucose-6-phosphate iso 86.0 0.53 1.8E-05 39.6 3.5 24 275-298 118-142 (190)
55 1o5u_A Novel thermotoga mariti 85.6 0.32 1.1E-05 36.7 1.8 23 277-300 69-92 (101)
56 2b8m_A Hypothetical protein MJ 85.6 2.9 9.8E-05 31.4 7.4 21 279-300 69-90 (117)
57 2vqa_A SLL1358 protein, MNCA; 85.5 1.3 4.5E-05 40.6 6.3 23 276-299 278-301 (361)
58 1oi6_A PCZA361.16; epimerase, 85.4 2.5 8.7E-05 36.1 7.6 31 169-199 47-81 (205)
59 3rns_A Cupin 2 conserved barre 85.4 1.8 6.1E-05 37.2 6.7 34 171-204 39-72 (227)
60 1j58_A YVRK protein; cupin, de 85.3 1.2 4.2E-05 41.3 6.1 32 172-204 83-114 (385)
61 3nw4_A Gentisate 1,2-dioxygena 85.1 2.3 7.8E-05 39.8 7.6 27 276-303 317-344 (368)
62 1uij_A Beta subunit of beta co 83.9 0.81 2.8E-05 43.5 4.1 23 276-298 91-114 (416)
63 3lwc_A Uncharacterized protein 83.5 0.69 2.4E-05 35.8 2.9 23 276-299 77-100 (119)
64 4b29_A Dimethylsulfoniopropion 83.2 1.9 6.5E-05 37.2 5.8 35 170-204 133-167 (217)
65 1upi_A DTDP-4-dehydrorhamnose 83.2 4.2 0.00014 35.3 8.0 31 169-199 66-100 (225)
66 3bcw_A Uncharacterized protein 83.1 0.64 2.2E-05 36.4 2.6 23 276-299 87-110 (123)
67 3st7_A Capsular polysaccharide 82.9 2.4 8.1E-05 38.7 6.8 36 170-205 273-309 (369)
68 2ixk_A DTDP-4-dehydrorhamnose 82.9 1.8 6.2E-05 36.4 5.5 31 169-199 49-82 (184)
69 2ea7_A 7S globulin-1; beta bar 82.7 1 3.6E-05 43.0 4.4 23 276-298 103-126 (434)
70 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 82.6 1.9 6.3E-05 36.3 5.4 31 169-199 48-81 (185)
71 4axo_A EUTQ, ethanolamine util 82.5 0.72 2.5E-05 37.6 2.7 24 276-300 102-126 (151)
72 2pfw_A Cupin 2, conserved barr 82.4 0.82 2.8E-05 34.4 2.9 27 276-303 72-99 (116)
73 3fjs_A Uncharacterized protein 82.2 0.8 2.7E-05 34.9 2.8 25 277-302 75-100 (114)
74 3jzv_A Uncharacterized protein 82.0 3.8 0.00013 33.5 7.1 23 276-299 91-114 (166)
75 2qnk_A 3-hydroxyanthranilate 3 81.8 3.5 0.00012 36.9 7.1 69 170-304 32-101 (286)
76 2oa2_A BH2720 protein; 1017534 81.7 0.97 3.3E-05 36.0 3.2 24 275-299 87-111 (148)
77 2q30_A Uncharacterized protein 81.6 0.72 2.5E-05 34.2 2.3 25 277-302 75-100 (110)
78 2c0z_A NOVW; isomerase, epimer 81.3 3.4 0.00012 35.6 6.7 31 169-199 55-89 (216)
79 1dzr_A DTDP-4-dehydrorhamnose 81.3 2.2 7.7E-05 35.8 5.4 31 169-199 47-81 (183)
80 3d82_A Cupin 2, conserved barr 81.2 0.6 2.1E-05 34.1 1.7 23 277-300 69-92 (102)
81 1v70_A Probable antibiotics sy 81.2 1.2 4.1E-05 32.3 3.4 23 276-299 67-90 (105)
82 1fi2_A Oxalate oxidase, germin 81.0 1.1 3.8E-05 37.9 3.5 24 275-299 118-142 (201)
83 2ea7_A 7S globulin-1; beta bar 80.8 0.8 2.7E-05 43.8 2.8 25 274-298 321-346 (434)
84 1y3t_A Hypothetical protein YX 79.7 3.8 0.00013 36.9 6.9 22 277-299 86-108 (337)
85 2opk_A Hypothetical protein; p 79.5 1.2 4.1E-05 33.8 2.9 22 278-299 75-97 (112)
86 1pmi_A PMI, phosphomannose iso 78.3 0.98 3.3E-05 43.3 2.5 32 276-307 266-298 (440)
87 2cav_A Protein (canavalin); vi 78.2 1.2 4.2E-05 42.7 3.1 25 274-298 334-359 (445)
88 2gu9_A Tetracenomycin polyketi 78.2 1.6 5.3E-05 32.3 3.2 22 277-299 63-85 (113)
89 1juh_A Quercetin 2,3-dioxygena 77.5 3.8 0.00013 37.7 6.3 23 277-300 292-315 (350)
90 1j58_A YVRK protein; cupin, de 77.5 5 0.00017 37.1 7.1 23 275-297 300-323 (385)
91 2pyt_A Ethanolamine utilizatio 77.3 1.3 4.6E-05 34.9 2.7 24 276-300 93-117 (133)
92 3d0j_A Uncharacterized protein 77.2 1.2 4E-05 35.8 2.2 29 276-304 76-105 (140)
93 4hn1_A Putative 3-epimerase in 77.1 9.1 0.00031 32.5 8.0 78 169-304 44-128 (201)
94 1wlt_A 176AA long hypothetical 76.2 3.9 0.00013 34.7 5.4 31 170-200 66-100 (196)
95 3ht1_A REMF protein; cupin fol 75.7 2.2 7.4E-05 33.2 3.5 23 276-299 79-102 (145)
96 3eqe_A Putative cystein deoxyg 75.5 6.4 0.00022 32.5 6.5 37 170-206 70-107 (171)
97 2i45_A Hypothetical protein; n 75.1 1.8 6.2E-05 32.1 2.8 23 276-299 67-90 (107)
98 2gm6_A Cysteine dioxygenase ty 75.0 7 0.00024 33.3 6.8 36 170-205 80-115 (208)
99 1zrr_A E-2/E-2' protein; nicke 74.6 1.5 5.2E-05 36.6 2.5 26 274-300 120-146 (179)
100 3h7j_A Bacilysin biosynthesis 73.8 4.9 0.00017 34.7 5.7 24 276-300 72-97 (243)
101 3uss_A Putative uncharacterize 72.6 9.3 0.00032 32.7 7.0 37 170-206 74-110 (211)
102 3l2h_A Putative sugar phosphat 72.5 2.8 9.4E-05 33.7 3.5 22 277-299 87-110 (162)
103 2wfp_A Mannose-6-phosphate iso 72.2 1.8 6.2E-05 40.8 2.6 30 276-305 240-270 (394)
104 2cav_A Protein (canavalin); vi 72.0 3.1 0.00011 39.9 4.2 23 276-299 128-151 (445)
105 3rns_A Cupin 2 conserved barre 71.6 9.2 0.00031 32.6 6.8 26 276-302 191-218 (227)
106 2d40_A Z3393, putative gentisa 71.3 2.2 7.6E-05 39.5 3.0 23 276-299 139-162 (354)
107 1y3t_A Hypothetical protein YX 71.2 12 0.0004 33.5 7.8 23 276-299 257-280 (337)
108 1o4t_A Putative oxalate decarb 71.1 2.5 8.6E-05 32.9 2.8 23 276-299 96-119 (133)
109 2bnm_A Epoxidase; oxidoreducta 70.6 2.5 8.7E-05 35.0 2.9 23 276-299 162-185 (198)
110 2f4p_A Hypothetical protein TM 70.3 17 0.00057 28.6 7.7 21 278-299 89-110 (147)
111 3i7d_A Sugar phosphate isomera 69.7 3.4 0.00012 33.5 3.5 23 276-299 83-108 (163)
112 2d5f_A Glycinin A3B4 subunit; 69.5 4.5 0.00015 39.2 4.8 38 171-209 48-85 (493)
113 3es4_A Uncharacterized protein 69.2 2.1 7.3E-05 33.1 2.0 18 277-294 81-99 (116)
114 3cew_A Uncharacterized cupin p 68.8 3 0.0001 31.8 2.8 22 277-299 67-89 (125)
115 1zx5_A Mannosephosphate isomer 68.4 2 6.8E-05 38.9 1.9 24 276-299 158-182 (300)
116 1vr3_A Acireductone dioxygenas 68.3 2.7 9.1E-05 35.6 2.5 24 275-299 126-150 (191)
117 4i4a_A Similar to unknown prot 68.3 3 0.0001 31.8 2.7 23 276-299 72-95 (128)
118 3es1_A Cupin 2, conserved barr 67.4 6.7 0.00023 32.4 4.8 21 277-299 119-140 (172)
119 2ozi_A Hypothetical protein RP 67.3 1.3 4.5E-05 33.0 0.4 23 277-299 60-83 (98)
120 2e9q_A 11S globulin subunit be 67.2 5.6 0.00019 38.2 4.8 37 172-209 67-103 (459)
121 1dgw_Y Canavalin; duplicated s 66.8 4.6 0.00016 30.0 3.3 27 274-300 4-31 (93)
122 1vj2_A Novel manganese-contain 66.7 3.8 0.00013 31.4 3.0 22 277-299 87-109 (126)
123 1fxz_A Glycinin G1; proglycini 66.5 6.6 0.00023 37.9 5.2 38 171-209 51-88 (476)
124 2xlg_A SLL1785 protein, CUCA; 65.4 2.9 9.8E-05 36.6 2.2 25 274-299 100-125 (239)
125 1qwr_A Mannose-6-phosphate iso 64.6 2.5 8.5E-05 38.6 1.7 22 276-297 158-180 (319)
126 3qac_A 11S globulin SEED stora 63.4 10 0.00035 36.5 5.8 42 171-214 53-94 (465)
127 3s7i_A Allergen ARA H 1, clone 61.6 4.7 0.00016 38.3 3.1 37 172-209 267-304 (418)
128 3kgl_A Cruciferin; 11S SEED gl 61.3 6.1 0.00021 38.0 3.9 38 172-210 47-84 (466)
129 3h7j_A Bacilysin biosynthesis 60.4 5 0.00017 34.7 2.9 23 276-299 184-207 (243)
130 1y9q_A Transcriptional regulat 60.4 5.4 0.00019 32.8 3.0 23 276-299 144-167 (192)
131 4h7l_A Uncharacterized protein 60.4 4.4 0.00015 33.1 2.3 21 276-296 86-107 (157)
132 2vpv_A Protein MIF2, MIF2P; nu 58.5 5.2 0.00018 33.0 2.5 25 276-301 128-153 (166)
133 3ksc_A LEGA class, prolegumin; 56.5 15 0.00051 35.6 5.7 37 172-209 50-86 (496)
134 1sq4_A GLXB, glyoxylate-induce 52.7 8.4 0.00029 34.2 3.1 23 276-299 108-131 (278)
135 1rc6_A Hypothetical protein YL 52.3 8.1 0.00028 33.7 2.9 23 276-299 99-122 (261)
136 3eln_A Cysteine dioxygenase ty 52.0 65 0.0022 27.0 8.4 35 172-206 73-108 (200)
137 1juh_A Quercetin 2,3-dioxygena 50.3 8.2 0.00028 35.5 2.7 23 276-299 94-117 (350)
138 3myx_A Uncharacterized protein 49.9 8.3 0.00029 33.6 2.5 18 275-292 204-222 (238)
139 1rc6_A Hypothetical protein YL 48.9 8.8 0.0003 33.4 2.6 24 275-299 217-241 (261)
140 1sef_A Conserved hypothetical 48.6 10 0.00035 33.4 2.9 23 276-299 102-125 (274)
141 1sfn_A Conserved hypothetical 45.9 12 0.00039 32.5 2.8 23 276-299 86-109 (246)
142 3s7i_A Allergen ARA H 1, clone 45.0 12 0.00042 35.4 3.0 22 276-297 86-108 (418)
143 2lkt_A Retinoic acid receptor 43.6 9.8 0.00033 29.4 1.8 21 280-300 8-30 (125)
144 2phl_A Phaseolin; plant SEED s 42.4 15 0.00051 34.5 3.2 36 170-206 54-89 (397)
145 3myx_A Uncharacterized protein 42.4 14 0.00049 32.1 2.8 35 275-310 82-117 (238)
146 1sfn_A Conserved hypothetical 42.2 12 0.0004 32.5 2.2 25 275-300 203-228 (246)
147 2arc_A ARAC, arabinose operon 41.1 19 0.00066 27.9 3.3 21 276-296 56-77 (164)
148 1sef_A Conserved hypothetical 40.6 15 0.00053 32.1 2.8 24 275-298 220-244 (274)
149 2pa7_A DTDP-6-deoxy-3,4-keto-h 37.7 20 0.00068 28.5 2.7 27 178-204 44-71 (141)
150 3kmh_A D-lyxose isomerase; cup 37.2 57 0.0019 28.4 5.7 84 170-296 107-193 (246)
151 1sq4_A GLXB, glyoxylate-induce 33.1 24 0.00082 31.1 2.8 25 274-299 228-253 (278)
152 3c3v_A Arachin ARAH3 isoform; 32.9 18 0.00063 35.1 2.2 39 170-209 50-88 (510)
153 4e2q_A Ureidoglycine aminohydr 31.3 20 0.0007 31.6 2.0 24 277-301 110-134 (266)
154 3dl3_A Tellurite resistance pr 27.7 33 0.0011 26.5 2.4 30 276-305 64-94 (119)
155 3bb6_A Uncharacterized protein 26.7 31 0.0011 27.0 2.1 26 275-300 64-90 (127)
156 3rco_A Tudor domain-containing 24.1 48 0.0016 24.2 2.6 14 1-14 8-21 (89)
157 3i3q_A Alpha-ketoglutarate-dep 23.0 54 0.0018 27.8 3.1 26 274-300 154-183 (211)
158 4e2q_A Ureidoglycine aminohydr 22.9 50 0.0017 29.1 3.0 24 276-300 225-249 (266)
159 2rg4_A Uncharacterized protein 21.9 1.6E+02 0.0055 24.6 5.9 24 276-299 169-193 (216)
160 1zuy_A Myosin-5 isoform; SH3 d 21.7 21 0.00071 22.9 0.2 19 276-294 16-39 (58)
161 3fz3_A Prunin; TREE NUT allerg 21.1 43 0.0015 32.6 2.3 39 171-210 51-89 (531)
162 2o1q_A Putative acetyl/propion 20.7 28 0.00097 27.4 0.8 18 277-294 85-103 (145)
163 1ujx_A Polynucleotide kinase 3 20.4 66 0.0023 24.8 2.8 26 273-298 87-114 (119)
No 1
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=100.00 E-value=2.1e-49 Score=353.64 Aligned_cols=231 Identities=21% Similarity=0.380 Sum_probs=188.1
Q ss_pred CceeeeCCCCCHHHHHHHhhcCCCCEEEEcCCCCCCCccccCCCChhhHHHhcCCCCcEEEEeccCCCCCcccccCCCCC
Q 021159 20 STIERLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLWPHPSYLSKTLSSSPPVSVHLSPNGRADSLVTLTHPRS 99 (316)
Q Consensus 20 ~~I~ri~~~~s~~~F~~~y~~~~~PvVi~g~~~~~~WpA~~~Wt~~eyL~~~~G~~~~V~V~~~~~~~~d~~~~~~~~~~ 99 (316)
.+|+||++ +|+++|+++|+.+++||||+|++. +|||+++|+. +||++++|+. .|.|+.+.....
T Consensus 1 stipri~~-pS~~eF~~~y~~~~~Pvvi~g~~~--~wpa~~~w~~-~yL~~~~g~~-~v~v~~~~~~~~----------- 64 (235)
T 4gjz_A 1 STVPRLHR-PSLQHFREQFLVPGRPVILKGVAD--HWPCMQKWSL-EYIQEIAGCR-TVPVEVGSRYTD----------- 64 (235)
T ss_dssp CBCCEEES-CCHHHHHHHTTTTTCCEEEESSST--TSHHHHHCSH-HHHHHHHTTS-EEEEEEC----------------
T ss_pred CCCCCCCC-CCHHHHHHHHhcCCCcEEEeCCCc--CCcccccCCH-HHHHHHcCCC-eEEEEecCcccC-----------
Confidence 37999996 999999999999999999999999 9999999997 9999999999 999987532110
Q ss_pred CcccccccccceeeecHHHHHHHHhccCCCCccccccccccccchhhhhhhcccccchh-hhHHh-hCCCCCeeEEEeeC
Q 021159 100 GEISQCFASAHVERLPFDEALQLVSNSKNGDVVAYLQQQNDCFRDEYSVLGSDCDEHIA-WATEA-LGCYPEAVNLWIGN 177 (316)
Q Consensus 100 g~~~~~F~~~~~~~mt~~efl~~~~~~~~~~~~~Yl~~~~~~l~~~~p~L~~D~~~~~p-~~~~~-~~~~~~~~~lwiG~ 177 (316)
. +.....|+|++|++.+..... ....|+.+.+ +...+|+|.+|+. +| +.... +.......++|||+
T Consensus 65 ----~---~~~~~~~~~~~~~~~~~~~~~-~~~~y~~~~~--~~~~~~~l~~d~~--~p~~~~~~~~~~~~~~~~~wiG~ 132 (235)
T 4gjz_A 65 ----E---EWSQTLMTVNEFISKYIVNEP-RDVGYLAQHQ--LFDQIPELKQDIS--IPDYCSLGDGEEEEITINAWFGP 132 (235)
T ss_dssp ---------CEEEEEEHHHHHHHHTSSCC-SSCEEEEEEC--HHHHCHHHHTTCC--CCGGGGGSSSCGGGCEEEEEEEC
T ss_pred ----C---ccceeeccHHHHHHHHhhcCC-cccceeehhh--hhhhhHHHHHhhc--CCccccccccccCccceEEEEeC
Confidence 1 224678999999999876543 3466777543 5567788999984 44 22111 11234578999999
Q ss_pred CCCCCCccccCCCcEEEEEEeEEEEEEeCCCCCCCCcccccCCcccccccccCCcceeeeccCCcccccccccCCCCCcc
Q 021159 178 QLSETSFHKDHYENLYTVVSGQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELEEPVRYVPWCSVNPYPSPE 257 (316)
Q Consensus 178 ~gs~t~~H~D~~~n~~~qv~G~Kr~~L~pP~~~~~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~vd~~~~~~ 257 (316)
+|++|++|+|+++|++|||.|+|+|+|+||.+...||+.... .....|.+|+
T Consensus 133 ~gs~t~~H~D~~~n~~~qv~G~K~w~L~pP~~~~~l~~~~~~-----------------------~~~~~s~vd~----- 184 (235)
T 4gjz_A 133 QGTISPLHQDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTH-----------------------LLHNTSQVDV----- 184 (235)
T ss_dssp TTCEEEEECCSSEEEEEEEESCEEEEEECGGGGGGSCBCSST-----------------------TTTTBBSSCT-----
T ss_pred CCCCceeeeccccceEEEEeeeEeeEEcCcccccccccCccc-----------------------ccCccccccc-----
Confidence 999999999999999999999999999999999999975321 1123467888
Q ss_pred ccccccccCCCccCCCccEEEEEcCCCEEeeC-cCcceeeecCCcchhhhccc
Q 021159 258 TRESEMAKFPLYFNGPKPFECTVNAGEILYLL-IWFRKAVRNSEVNVVELMQA 309 (316)
Q Consensus 258 ~~~pd~~~fP~~~~~~~~~~~~L~pGD~LfiP-gWwH~vv~~~~~~v~~~~~~ 309 (316)
.+||+++||+|++ +++++|+|+|||+|||| ||||+ |.+++.||++|.+|
T Consensus 185 -~~~d~~~~p~~~~-~~~~~~~l~pGD~LyiP~gW~H~-V~~l~~sisvn~w~ 234 (235)
T 4gjz_A 185 -ENPDLEKFPKFAK-APFLSCILSPGEILFIPVKYWHY-VRALDLSFSVSFWW 234 (235)
T ss_dssp -TSCCTTTCGGGGG-CCCEEEEECTTCEEEECTTCEEE-EEESSSEEEEEEEE
T ss_pred -cCcchhhCccccC-CCcEEEEECCCCEEEeCCCCcEE-EEECCCEEEEEEec
Confidence 8899999999998 99999999999999999 99999 78889999999886
No 2
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=100.00 E-value=1.2e-44 Score=341.90 Aligned_cols=242 Identities=26% Similarity=0.442 Sum_probs=187.6
Q ss_pred hhhhcCC-CCCceeeeCCCCCHHHHHHHhhcCCCCEEEEcCCCCCCCccccCCCChhhHHHhcCCCCcEEEEeccCCCCC
Q 021159 11 VRELSLG-SNSTIERLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLWPHPSYLSKTLSSSPPVSVHLSPNGRAD 89 (316)
Q Consensus 11 ~~~~~~~-~~~~I~ri~~~~s~~~F~~~y~~~~~PvVi~g~~~~~~WpA~~~Wt~~eyL~~~~G~~~~V~V~~~~~~~~d 89 (316)
...|-|. ....|+|+++ +|+++|.++|+.+++||||+| +. +|||+++|+. +||++++|+. .|+|+.++.+..+
T Consensus 19 ~~~l~~~~~~~~I~r~~~-lS~~eF~~~y~~~~kPvVi~g-~~--~wpa~~~Ws~-dyL~~~~g~~-~V~v~~~~~~~~~ 92 (338)
T 3al5_A 19 QGPLHMAGQHLPVPRLEG-VSREQFMQHLYPQRKPLVLEG-ID--LGPCTSKWTV-DYLSQVGGKK-EVKIHVAAVAQMD 92 (338)
T ss_dssp --------CCCBCCEEES-CCHHHHHHHTGGGCCCEEEES-CC--CCTHHHHCCH-HHHHHHHCSC-EEEEEC----CCC
T ss_pred cCcccccCCCCCCCEECC-CCHHHHHHHhhcCCCeEEEeC-CC--CCcccccCCH-HHHHHhhCCc-eEEEEEcCCCCcc
Confidence 3445554 5678999997 999999999999999999999 88 9999999997 9999999999 9999876654332
Q ss_pred cccccCCCCCCcccccccccceeeecHHHHHHHHhccCC------CCcccccccccc-------ccchhhhhhhcccccc
Q 021159 90 SLVTLTHPRSGEISQCFASAHVERLPFDEALQLVSNSKN------GDVVAYLQQQND-------CFRDEYSVLGSDCDEH 156 (316)
Q Consensus 90 ~~~~~~~~~~g~~~~~F~~~~~~~mt~~efl~~~~~~~~------~~~~~Yl~~~~~-------~l~~~~p~L~~D~~~~ 156 (316)
.. .+.| ..+.|+|++|++.+.+... ....+|+++.+. .+..++|+|.+|+.
T Consensus 93 ~~-----------~~~~---~~~~~~f~efl~~~~~~~~~~~l~~~~~~~Yl~~~~~~~~~~~~~l~~~~p~L~~d~~-- 156 (338)
T 3al5_A 93 FI-----------SKNF---VYRTLPFDQLVQRAAEEKHKEFFVSEDEKYYLRSLGEDPRKDVADIRKQFPLLKGDIK-- 156 (338)
T ss_dssp C------------CCCC---CEEEEEHHHHHHHHHC-CCSSCSSCTTCCCEEECCCSSTTTCCCCHHHHCHHHHTTCC--
T ss_pred cc-----------cccc---eeEEeEHHHHHHHHHhccccccccCCCcccchhhcccccccchhhHhHHCHHHHHhcC--
Confidence 21 1223 4579999999999876432 235789886431 35667899999985
Q ss_pred hhhhHHhhCCC-CCeeEEEeeCCCCCCCccccCCCcEEEEEEeEEEEEEeCCCCCCCCcccccCCcccccccccCCccee
Q 021159 157 IAWATEALGCY-PEAVNLWIGNQLSETSFHKDHYENLYTVVSGQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFT 235 (316)
Q Consensus 157 ~p~~~~~~~~~-~~~~~lwiG~~gs~t~~H~D~~~n~~~qv~G~Kr~~L~pP~~~~~ly~~~~~~~~~~~~~~~~~~~~~ 235 (316)
+| .++..+ ....++|||++|++|++|+|+++|++|||.|+|+|+|+||.+...||+.. ..
T Consensus 157 ~P---~~~~~d~~~~s~l~~g~~g~~~~~H~D~~~n~~~qv~G~K~w~L~pP~~~~~ly~~~-------------~~--- 217 (338)
T 3al5_A 157 FP---EFFKEEQFFSSVFRISSPGLQLWTHYDVMDNLLIQVTGKKRVVLFSPRDAQYLYLKG-------------TK--- 217 (338)
T ss_dssp CC---CCSCGGGEEEEEEEEECTTCEEEEECCSSEEEEEECSSCEEEEEECGGGGGGGTEET-------------TE---
T ss_pred CC---ccccccccccceeEECCCCCCccceECCcccEEEEEEEEEEEEEECcccccccccCC-------------CC---
Confidence 44 122211 12568999999999999999999999999999999999999999898632 00
Q ss_pred eeccCCcccccccccCCCCCccccccccccCCCccCCCccEEEEEcCCCEEeeC-cCcceeeecCCcchhhhcccCcc
Q 021159 236 LELEEPVRYVPWCSVNPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLL-IWFRKAVRNSEVNVVELMQAKHV 312 (316)
Q Consensus 236 ~~~~~~~~~~~~s~vd~~~~~~~~~pd~~~fP~~~~~~~~~~~~L~pGD~LfiP-gWwH~vv~~~~~~v~~~~~~~~~ 312 (316)
-+.+|+ .+||+++||.|++ +++++|+|+|||+|||| ||||+ |.+++.||++|.+|.++
T Consensus 218 -----------~~~~d~------~~~d~~~~p~~~~-~~~~~~~L~pGD~LyiP~gWwH~-v~~l~~sisvn~~~~~~ 276 (338)
T 3al5_A 218 -----------SEVLNI------DNPDLAKYPLFSK-ARRYECSLEAGDVLFIPALWFHN-VISEEFGVGVNIFWKHL 276 (338)
T ss_dssp -----------ESCCCS------SSCCTTTCTTGGG-CCEEEEEECTTCEEEECTTCEEE-EEESSCEEEEEEEECSS
T ss_pred -----------cccccC------CCcchhhCccccc-CCCEEEEECCCCEEEECCCCeEE-EeeCCCEEEEEEEecCC
Confidence 023566 6788999999987 89999999999999999 99999 77889999999988765
No 3
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=100.00 E-value=1.6e-42 Score=328.52 Aligned_cols=257 Identities=20% Similarity=0.334 Sum_probs=186.8
Q ss_pred HhhhhcCCCCCceeeeCCCCCHHHHHHHhhcCCCCEEEEcCCCCCCCccccCCCChhhHHHhcCCCCcEEEEeccCCCCC
Q 021159 10 EVRELSLGSNSTIERLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLWPHPSYLSKTLSSSPPVSVHLSPNGRAD 89 (316)
Q Consensus 10 ~~~~~~~~~~~~I~ri~~~~s~~~F~~~y~~~~~PvVi~g~~~~~~WpA~~~Wt~~eyL~~~~G~~~~V~V~~~~~~~~d 89 (316)
+-|++++ ...+|+|+++ +|++ | ++|+.+++||||+|++. +|+| ++|+. +||++++|+. .|+|+.++.++..
T Consensus 31 ~~~~~~~-~~~~I~Rv~~-~s~~-~-~~y~~~~~PVVi~g~~~--~wpA-~kWt~-eyL~~~~G~~-~V~V~~~~~~~~~ 101 (349)
T 3d8c_A 31 QLRSYSF-PTRPIPRLSQ-SDPR-A-EELIENEEPVVLTDTNL--VYPA-LKWDL-EYLQENIGNG-DFSVYSASTHKFL 101 (349)
T ss_dssp GSCCCSS-CEEECCEECT-TCHH-H-HHHHHTTCCEEESCCCT--TGGG-GGCCH-HHHHHHSCSS-CEEEEEESSSBCC
T ss_pred HHHhcCC-CCCCceEecC-CChh-H-HHHhcCCccEEEeCCCC--Cccc-ccCCH-HHHHHhhCCC-eEEEEECCCCccc
Confidence 4455533 2358999996 7887 5 77999999999999999 9999 99997 9999999999 9999877554321
Q ss_pred cccccCCCCCCccccccccc-ceeeecHHHHHHHHhccC--CCCccccccccccccchhhhhhhcccccchh--hhHHh-
Q 021159 90 SLVTLTHPRSGEISQCFASA-HVERLPFDEALQLVSNSK--NGDVVAYLQQQNDCFRDEYSVLGSDCDEHIA--WATEA- 163 (316)
Q Consensus 90 ~~~~~~~~~~g~~~~~F~~~-~~~~mt~~efl~~~~~~~--~~~~~~Yl~~~~~~l~~~~p~L~~D~~~~~p--~~~~~- 163 (316)
..-.. .+...+.|... ....|+|++|++.+.+.. .+...+|+++... ....|.|.+|+.. ++ |..+.
T Consensus 102 y~d~~----~~~~~~~F~~~~~~~~m~~~efl~~~~~~~~~~~~~~~YL~~~~~--~~~~~~l~~D~~~-~~~~~~~~~~ 174 (349)
T 3d8c_A 102 YYDEK----KMANFQNFKPRSNREEMKFHEFVEKLQDIQQRGGEERLYLQQTLN--DTVGRKIVMDFLG-FNWNWINKQQ 174 (349)
T ss_dssp CCCGG----GTTSCTTCCCSEEEEEECHHHHHHHHHHHHHHTCCCEEEEEEECC--TTSCHHHHHHHHT-SCHHHHHHHH
T ss_pred ccccc----cccccccccccceeEeeEHHHHHHHHHhhcccCCCCCeeeecccc--cccchhhhhhhhc-cchhhhhhhh
Confidence 10000 00001334322 357999999999998742 1346899986421 1123456666642 22 22111
Q ss_pred --hCCCC-CeeEEEeeCCCCCCCccccCCCcEEEEEEeEEEEEEeCCCCCCCCcccccCCcccccccccCCcceeeeccC
Q 021159 164 --LGCYP-EAVNLWIGNQLSETSFHKDHYENLYTVVSGQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELEE 240 (316)
Q Consensus 164 --~~~~~-~~~~lwiG~~gs~t~~H~D~~~n~~~qv~G~Kr~~L~pP~~~~~ly~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (316)
.+..+ ...++|||++|++|++|+|+++|++|||.|+|+|+||||.+...||+.+..+.
T Consensus 175 ~~~~~~~~~~~~l~iG~~gs~t~~H~D~~~n~~~qv~G~K~~~L~pP~~~~~ly~~~~~~~------------------- 235 (349)
T 3d8c_A 175 GKRGWGQLTSNLLLIGMEGNVTPAHYGEQQNFFAQIKGYKRCILFPPDQFECLYPYPVHHP------------------- 235 (349)
T ss_dssp HHTTCCCEEECEEEEECTTCEEEEECCSEEEEEEEEESCEEEEEECGGGHHHHCBBCTTST-------------------
T ss_pred hccccCccccceEEEECCCCCccceECChhcEEEEEeceEEEEEeCcchhhhhccccccCC-------------------
Confidence 11122 23469999999999999999999999999999999999999998997642110
Q ss_pred CcccccccccCCCCCccccccccccCCCccCCCccEEEEEcCCCEEeeC-cCcceeeecCC---cchhhhcccCcc
Q 021159 241 PVRYVPWCSVNPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLL-IWFRKAVRNSE---VNVVELMQAKHV 312 (316)
Q Consensus 241 ~~~~~~~s~vd~~~~~~~~~pd~~~fP~~~~~~~~~~~~L~pGD~LfiP-gWwH~vv~~~~---~~v~~~~~~~~~ 312 (316)
...+|.+|+ .+||+++||.|++ +++++|+|+|||+|||| ||||+ |.+++ +||++|.++++-
T Consensus 236 ---~~~~s~vd~------~~~d~~~~p~~~~-~~~~~~~l~pGD~LyiP~gWwH~-V~~l~d~~~sisvn~w~~~~ 300 (349)
T 3d8c_A 236 ---CDRQSQVDF------DNPDYERFPNFQN-VVGYETVVGPGDVLYIPMYWWHH-IESLLNGGITITVNFWYKGA 300 (349)
T ss_dssp ---TBTBBCSCT------TSCCTTTCGGGGG-CCEEEEEECTTCEEEECTTCEEE-EEECTTSCCEEEEEEEEECC
T ss_pred ---CCCcccccC------CCcchhhCccccc-CCcEEEEECCCCEEEECCCCcEE-EEEcCCCCcEEEEEEEcCCC
Confidence 112467887 7889999999987 89999999999999999 99999 55554 899999988653
No 4
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=100.00 E-value=8.1e-41 Score=314.19 Aligned_cols=236 Identities=17% Similarity=0.314 Sum_probs=176.4
Q ss_pred CCCceeeeC-CCCCHHHHHHHhhcCCCCEEEEcCCCCCCCccccCCCChhhHHHhcCCCCcEEEEeccCCCCCcccccCC
Q 021159 18 SNSTIERLE-SPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLWPHPSYLSKTLSSSPPVSVHLSPNGRADSLVTLTH 96 (316)
Q Consensus 18 ~~~~I~ri~-~~~s~~~F~~~y~~~~~PvVi~g~~~~~~WpA~~~Wt~~eyL~~~~G~~~~V~V~~~~~~~~d~~~~~~~ 96 (316)
..+.|+||+ ..+|+++|.++|+.+++||||+|++. +|||+++|+. +||++++|+. .|.|....+
T Consensus 43 ~~~~I~Ri~~~~lS~eeF~~~y~~~~~PvVi~g~~~--~WpA~~~Wt~-~yL~~~~G~~-~V~v~~~~~----------- 107 (336)
T 3k2o_A 43 VADNVERADALQLSVEEFVERYERPYKPVVLLNAQE--GWSAQEKWTL-ERLKRKYRNQ-KFKCGEDND----------- 107 (336)
T ss_dssp CCCCCCEEEGGGCCHHHHHHHTTTTTCCEEEESTTT--TCTHHHHCSH-HHHHHHSTTC-EEEEEECTT-----------
T ss_pred cCCCCCEecCCCCCHHHHHHHhhccCCCEEEeCCcC--CChhHhhhhH-HHHHHHhCCc-eEEEEecCC-----------
Confidence 467899997 36999999999999999999999999 9999999996 9999999999 998875321
Q ss_pred CCCCcccccccccceeeecHHHHHHHHhccCCCCccccccccccccc--hhhhhhhcccccchh--hhHHhh---C--CC
Q 021159 97 PRSGEISQCFASAHVERLPFDEALQLVSNSKNGDVVAYLQQQNDCFR--DEYSVLGSDCDEHIA--WATEAL---G--CY 167 (316)
Q Consensus 97 ~~~g~~~~~F~~~~~~~mt~~efl~~~~~~~~~~~~~Yl~~~~~~l~--~~~p~L~~D~~~~~p--~~~~~~---~--~~ 167 (316)
| ....|+|++|++.+.+... ...+|+.+.+ +. ..+|+|.+|+. +| |..+.+ + ..
T Consensus 108 ---~---------~~~~m~~~~fl~~~~~~~~-~~~lYL~d~~--~~e~~~~p~L~~dy~--~P~~f~~d~~~~~~~~~~ 170 (336)
T 3k2o_A 108 ---G---------YSVKMKMKYYIEYMESTRD-DSPLYIFDSS--YGEHPKRRKLLEDYK--VPKFFTDDLFQYAGEKRR 170 (336)
T ss_dssp ---S---------CEEEEEHHHHHHHHHHCCC-SSCCCEEESC--GGGSTTGGGGGGGCC--CCGGGCCCGGGGGCTTTS
T ss_pred ---C---------ceeeecHHHHHHHHHhcCC-CCCceEeccc--ccccccchhHHHhcC--CCcccccchhhhcccccC
Confidence 1 2468999999999987543 3578998643 43 24789999995 55 333333 2 23
Q ss_pred CCeeEEEeeCCCCCCCccccCCC--cEEEEEEeEEEEEEeCCCCCCCCcccccCCcccccccccCCcceeeeccCCcccc
Q 021159 168 PEAVNLWIGNQLSETSFHKDHYE--NLYTVVSGQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELEEPVRYV 245 (316)
Q Consensus 168 ~~~~~lwiG~~gs~t~~H~D~~~--n~~~qv~G~Kr~~L~pP~~~~~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (316)
+...++|||++|++|++|+|+++ |+++||.|+|+|+||||.+...||..+.. . ++.. ....+
T Consensus 171 p~~~~~~~G~~gs~t~~H~D~~~~~~~~~~v~G~K~~~L~pP~~~~~ly~~~~~-----~----~~~~-------~~~~~ 234 (336)
T 3k2o_A 171 PPYRWFVMGPPRSGTGIHIDPLGTSAWNALVQGHKRWCLFPTSTPRELIKVTRD-----E----GGNQ-------QDEAI 234 (336)
T ss_dssp CCCEEEEEECTTCEEEEECCGGGCEEEEEEEESCEEEEEECTTSCHHHHCCCHH-----H----HGGG-------TTCHH
T ss_pred CCceEEEECCCCccCCcccCCCccceeeEEEeeeEEEEEeCCCcchhcccCccc-----c----cCCC-------ccchh
Confidence 45789999999999999999886 59999999999999999998888854310 0 0000 00001
Q ss_pred cccccCCCCCccccccccccCCCccCCCccEEEEEcCCCEEeeC-cCcceeeecCCcchhhhcccCc
Q 021159 246 PWCSVNPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLL-IWFRKAVRNSEVNVVELMQAKH 311 (316)
Q Consensus 246 ~~s~vd~~~~~~~~~pd~~~fP~~~~~~~~~~~~L~pGD~LfiP-gWwH~vv~~~~~~v~~~~~~~~ 311 (316)
.|.. +.| ...+..+||. . +++++|+|+|||+|||| ||||+ |.+++.||.++.+|-+
T Consensus 235 ~w~~-~~~-----P~~~~~~~p~--~-~~~~~~~l~pGd~l~iP~gw~H~-v~~~~~sisv~~~f~~ 291 (336)
T 3k2o_A 235 TWFN-VIY-----PRTQLPTWPP--E-FKPLEILQKPGETVFVPGGWWHV-VLNLDTTIAITQNFAS 291 (336)
T ss_dssp HHHH-HTG-----GGGGSTTSCG--G-GCCEEEEECTTCEEEECTTCEEE-EEESSCEEEEEEEECC
T ss_pred hhhh-hhC-----cchhhhcccc--c-CceEEEEECCCCEEEeCCCCcEE-EecCCCeEEEEcccCC
Confidence 1110 000 0112233443 2 68899999999999999 99999 7888889998888765
No 5
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=99.97 E-value=2.9e-31 Score=256.54 Aligned_cols=221 Identities=14% Similarity=0.102 Sum_probs=152.3
Q ss_pred CCceeeeC-CCCCHHHHHHHhhcCCCCEEEEcCCCCCCCcc---ccCCCChhhHHHhcCC-CCcEEEEeccCCCCCcccc
Q 021159 19 NSTIERLE-SPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPA---FSLWPHPSYLSKTLSS-SPPVSVHLSPNGRADSLVT 93 (316)
Q Consensus 19 ~~~I~ri~-~~~s~~~F~~~y~~~~~PvVi~g~~~~~~WpA---~~~Wt~~eyL~~~~G~-~~~V~V~~~~~~~~d~~~~ 93 (316)
.+.|+|++ ..+|. +|+++ ...++||||+|. . +|+| .++||. +||++++|+ . .|.|.-+..
T Consensus 51 ~~~V~ri~~~~Ls~-EF~~~-~~~nkPVVIt~~-~--~Wpa~~P~~kWt~-dyL~~~~G~d~-~V~V~D~~~-------- 115 (451)
T 2yu1_A 51 ANFVTFMEGKDFNV-EYIQR-GGLRDPLIFKNS-D--GLGIKMPDPDFTV-NDVKMCVGSRR-MVDVMDVNT-------- 115 (451)
T ss_dssp CCCCEECCGGGCSH-HHHHH-HCSCSCEEESSC-T--TTTCBCCCTTCCH-HHHHHHTCTTC-CCCCEETTS--------
T ss_pred CCceEecccccCCH-HHHHh-cCCCCcEEEccC-c--CCCCcCCcCCCCH-HHHHHHcCCCc-eEeeEEcCC--------
Confidence 56899998 47999 99888 689999999999 8 9999 789997 999999995 5 777642110
Q ss_pred cCCCCCCcccccccccceeeecHHHHHHHHhccCCCCcccccc-c---cccccc--hhhhhhhcccccchh--hhH----
Q 021159 94 LTHPRSGEISQCFASAHVERLPFDEALQLVSNSKNGDVVAYLQ-Q---QNDCFR--DEYSVLGSDCDEHIA--WAT---- 161 (316)
Q Consensus 94 ~~~~~~g~~~~~F~~~~~~~mt~~efl~~~~~~~~~~~~~Yl~-~---~~~~l~--~~~p~L~~D~~~~~p--~~~---- 161 (316)
+ ....|+|++|++.+.+.......+|+. + .+..+. ...|.|.+|+. -+| |..
T Consensus 116 ------q---------~~~~M~l~eyidy~~~~~d~r~~LY~v~sLeF~~~~l~~~~~~P~l~~d~D-wv~~~~p~~l~~ 179 (451)
T 2yu1_A 116 ------Q---------KGIEMTMAQWTRYYETPEEEREKLYNVISLEFSHTRLENMVQRPSTVDFID-WVDNMWPRHLKE 179 (451)
T ss_dssp ------S---------CCTTCCHHHHHHHHTSCTTTCCSCEEEEEECCTTSTTGGGCBCCHHHHHHC-HHHHHSCGGGCC
T ss_pred ------C---------cceeeeHHHHHHHHhhccccccchhhhcccccccccccccccCchhhhhhh-cccccCchhhhh
Confidence 0 135899999999998865433567762 1 111121 12355665441 122 111
Q ss_pred ---Hhh---C--CCCC-eeEEEeeCCCCCCCccccCCC--cEEEEEEeEEEEEEeCCCCCCCCcccccCCcccccccccC
Q 021159 162 ---EAL---G--CYPE-AVNLWIGNQLSETSFHKDHYE--NLYTVVSGQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVND 230 (316)
Q Consensus 162 ---~~~---~--~~~~-~~~lwiG~~gs~t~~H~D~~~--n~~~qv~G~Kr~~L~pP~~~~~ly~~~~~~~~~~~~~~~~ 230 (316)
+.+ + ..+. ..++|||++||+|++|+|+.. ++++||.|+|+|+||||.+...++... +..+
T Consensus 180 ~~~d~f~~lge~~rP~~~r~~~mGp~gS~T~~H~D~~~ts~w~avi~GrK~w~L~PP~~~~~~~y~~-----~~~s---- 250 (451)
T 2yu1_A 180 SQTESTNAILEMQYPKVQKYCLMSVRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHNLELYEN-----WLLS---- 250 (451)
T ss_dssp -----------CCSCCCCCEEEEECTTCEEEEECCGGGCEEEEEEEESCEEEEEECCCHHHHHHHHH-----HHHT----
T ss_pred hhhhhhhhcccccCCchheEEEEccCCCCCCeEECCCCcchhhheecceEEEEEeCCCccccccccc-----cccc----
Confidence 122 2 1233 379999999999999999864 789999999999999999976422111 1000
Q ss_pred CcceeeeccCCcccccccccCCCCCccccccccccCCCccCCCccEEEEEcCCCEEeeC-cCcceeeecCCcchhhhccc
Q 021159 231 VERFTLELEEPVRYVPWCSVNPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLL-IWFRKAVRNSEVNVVELMQA 309 (316)
Q Consensus 231 ~~~~~~~~~~~~~~~~~s~vd~~~~~~~~~pd~~~fP~~~~~~~~~~~~L~pGD~LfiP-gWwH~vv~~~~~~v~~~~~~ 309 (316)
. + . +..-||.+. +++++|+|+|||+|||| ||||+ |.|++.+|+++-+|
T Consensus 251 ------------------~-~-------q--~~~~~p~~~--~~~~~v~l~pGE~LfIPsGWwH~-V~nledsIait~NF 299 (451)
T 2yu1_A 251 ------------------G-S-------Q--GDIFLGDRV--SDCQRIELKQGYTFVIPSGWIHA-VYTPTDTLVFGGNF 299 (451)
T ss_dssp ------------------T-C-------C--SSSCHHHHS--SCCEEEEECTTCEEEECTTCEEE-EECSSCEEEEEEEE
T ss_pred ------------------c-c-------c--hhhhhcccc--ccceEEEECCCcEEEeCCCceEE-EecCCCeEEEeeee
Confidence 0 0 0 001233332 57899999999999999 99999 77888888875555
Q ss_pred C
Q 021159 310 K 310 (316)
Q Consensus 310 ~ 310 (316)
=
T Consensus 300 ~ 300 (451)
T 2yu1_A 300 L 300 (451)
T ss_dssp C
T ss_pred C
Confidence 3
No 6
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=99.96 E-value=7.1e-29 Score=234.11 Aligned_cols=220 Identities=15% Similarity=0.120 Sum_probs=140.5
Q ss_pred CceeeeCCCCCHHHHHHHhhcCCCCEEEEcCCCCCCC-ccccCCCChhhHHHhcCCCCc---EEEEeccCCCCCcccccC
Q 021159 20 STIERLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQW-PAFSLWPHPSYLSKTLSSSPP---VSVHLSPNGRADSLVTLT 95 (316)
Q Consensus 20 ~~I~ri~~~~s~~~F~~~y~~~~~PvVi~g~~~~~~W-pA~~~Wt~~eyL~~~~G~~~~---V~V~~~~~~~~d~~~~~~ 95 (316)
..+..+-..+|+++|+++|+ .++|+||+|. . +| . ..|+. ++|.+.++.. . ..|++.. +..+.
T Consensus 19 ~~~~~ll~~is~e~F~~~yw-~kkPlvir~~-~--~~~~--~l~s~-~~L~~l~~~~-~v~~~~vrl~~-~~~~~----- 84 (342)
T 1vrb_A 19 SVLESIISPVTMSEFLEEYW-PVKPLVARGE-V--ERFT--SIPGF-EKVRTLENVL-AIYNNPVMVVG-DAVIE----- 84 (342)
T ss_dssp -CCHHHHTTSCHHHHHHHTT-TTSCEEECCC-G--GGGG--GSTTC-GGGSSHHHHH-HHCCSCEEEC------------
T ss_pred HHHHHHHcCCCHHHHHHHHh-ccCCEEEcCC-c--cccc--CCCCH-HHHHHHHhhc-CcCcCceEEeC-CCcCc-----
Confidence 34443333599999999999 7899999998 6 75 4 36775 6666655532 2 2233221 10000
Q ss_pred CCCCCccccccccccee-eecHHHHHHHHhccCCCCccccccccccccchhhhhhhcccccchhhhHHhhCCCCCeeE--
Q 021159 96 HPRSGEISQCFASAHVE-RLPFDEALQLVSNSKNGDVVAYLQQQNDCFRDEYSVLGSDCDEHIAWATEALGCYPEAVN-- 172 (316)
Q Consensus 96 ~~~~g~~~~~F~~~~~~-~mt~~efl~~~~~~~~~~~~~Yl~~~~~~l~~~~p~L~~D~~~~~p~~~~~~~~~~~~~~-- 172 (316)
+. |.. ... .++..+|.+...++ ..+++...+. ...++.+|.+++. ..++.. ...+
T Consensus 85 -------~~-~~~-~~g~~~~~~~~~~l~~~g----~tl~v~~~~~-~~p~l~~l~~~~~-------~~~~~~-~~~n~~ 142 (342)
T 1vrb_A 85 -------ES-EGI-TDRFLVSPAEALEWYEKG----AALEFDFTDL-FIPQVRRWIEKLK-------AELRLP-AGTSSK 142 (342)
T ss_dssp ----------------CEEECHHHHHHHHHTT----CCEEECCGGG-TCTHHHHHHHHHH-------HHTTCC-TTCCEE
T ss_pred -------cc-ccc-CCCcccCHHHHHHHHhCC----CeEEECChhH-hChHHHHHHHhhh-------hhcCCc-cccccc
Confidence 01 211 123 67888887765542 3566654332 2233444555543 112221 1234
Q ss_pred --EEeeCCCCCCCccccCCCcEEEEEEeEEEEEEe-CCCCCCCCcccccCCcccccccccCCcceeeeccCCcccccccc
Q 021159 173 --LWIGNQLSETSFHKDHYENLYTVVSGQKHFLLL-PPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELEEPVRYVPWCS 249 (316)
Q Consensus 173 --lwiG~~gs~t~~H~D~~~n~~~qv~G~Kr~~L~-pP~~~~~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 249 (316)
+|+|++|+++++|+|.++||+|||.|+|+|+|+ ||.....+|+... ...+.++
T Consensus 143 ~~~~~gp~g~~~~~H~D~~dnfl~Qv~G~Krw~L~~~P~~~~~l~~~~~------------------------~~~~~~~ 198 (342)
T 1vrb_A 143 AIVYAAKNGGGFKAHFDAYTNLIFQIQGEKTWKLAKNENVSNPMQHYDL------------------------SEAPYYP 198 (342)
T ss_dssp EEEEEECSSCCCCSEECSSEEEEEEEESCEEEEEECCSSCSSCSSCEEC------------------------C----CC
T ss_pred ceEEEeCCCCCCCCeECChhcEEEEEEEEEEEEEecCCccccccCcccc------------------------ccccccc
Confidence 999999999999999999999999999999999 8887766775211 0112345
Q ss_pred cCCCCCccccccccccCCCccCCCccEEEEEcCCCEEeeC-cCcceeeecC--Ccchhhhc
Q 021159 250 VNPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLL-IWFRKAVRNS--EVNVVELM 307 (316)
Q Consensus 250 vd~~~~~~~~~pd~~~fP~~~~~~~~~~~~L~pGD~LfiP-gWwH~vv~~~--~~~v~~~~ 307 (316)
+|+ .+++.++||.++. ++.++|+|+|||+|||| ||||+ |.+. +.|+.+++
T Consensus 199 ~~~------~~~~~~~~p~~~~-~~~~~~~L~pGD~LyiP~gwwH~-v~s~~~~~slsvsi 251 (342)
T 1vrb_A 199 DDL------QSYWKGDPPKEDL-PDAEIVNLTPGTMLYLPRGLWHS-TKSDQATLALNITF 251 (342)
T ss_dssp HHH------HHHCCSCCCCTTC-CSSEEEEECTTCEEEECTTCEEE-EECSSCEEEEEEEE
T ss_pred ccc------cccchhhcccccc-CCceEEEECCCcEEEeCCCccEE-EEECCCCceEEEEE
Confidence 565 6777889999987 89999999999999999 99999 5555 34544433
No 7
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=99.95 E-value=1e-27 Score=225.65 Aligned_cols=224 Identities=16% Similarity=0.160 Sum_probs=149.2
Q ss_pred cCCCCC-ceeeeC-CCCCHHHHHHHhhcCCCCEEEEcCC---CCCCCccccCCCChhhHHHhcCCCCcEEEEeccCCCCC
Q 021159 15 SLGSNS-TIERLE-SPPTPLQFLRDYVSQNKPCIIKNVS---LHHQWPAFSLWPHPSYLSKTLSSSPPVSVHLSPNGRAD 89 (316)
Q Consensus 15 ~~~~~~-~I~ri~-~~~s~~~F~~~y~~~~~PvVi~g~~---~~~~WpA~~~Wt~~eyL~~~~G~~~~V~V~~~~~~~~d 89 (316)
.++++. -|.+++ +.+|.+.|.+.. .++||||++.. . .||+. +||. +|+++.+|+.+.|+|.-+..
T Consensus 11 ~~~~~~~~v~~i~~~d~t~~y~~~~~--~~~Pvli~~~~glg~--~~P~~-~~tv-~~v~~~vG~d~~V~ViDv~~---- 80 (371)
T 3k3o_A 11 TFDSSDEVILKPTGNQLTVEFLEENS--FSVPILVLKKDGLGM--TLPSP-SFTV-RDVEHYVGSDKEIDVIDVTR---- 80 (371)
T ss_dssp CCBCCTTTSBCCCTTTCCHHHHHHHT--TCSCEEESSCTTSCC--BCCCT-TCCH-HHHHHHHCC-CEEEEEETTT----
T ss_pred CCCCHHHhcccCChhhCcHHHHHhcC--CCCCEEEecCcccCC--cCCCC-CCCH-HHHHHHcCCCceEeeeecCc----
Confidence 344444 477888 478888877654 58899998643 5 79986 8997 99999999433888763211
Q ss_pred cccccCCCCCCcccccccccceeeecHHHHHHHHhccCCCCccccccccccc---cc--hhhhhhhccccc-chhhhHHh
Q 021159 90 SLVTLTHPRSGEISQCFASAHVERLPFDEALQLVSNSKNGDVVAYLQQQNDC---FR--DEYSVLGSDCDE-HIAWATEA 163 (316)
Q Consensus 90 ~~~~~~~~~~g~~~~~F~~~~~~~mt~~efl~~~~~~~~~~~~~Yl~~~~~~---l~--~~~p~L~~D~~~-~~p~~~~~ 163 (316)
....+|+|++|++.+.+..+ ...+|+.+.... +. -+.|.+..|+.- ..-|....
T Consensus 81 -------------------Q~~~~M~l~~y~dY~~~~~r-e~~lnv~d~efs~~~L~~~~~~P~~~~d~d~~~~~wp~~~ 140 (371)
T 3k3o_A 81 -------------------QADCKMKLGDFVKYYYSGKR-EKVLNVISLEFSDTRLSNLVETPKIVRKLSWVENLWPEEC 140 (371)
T ss_dssp -------------------TEEEEEEHHHHHHHHTCTTC-CSCEEEEEEECTTSGGGGTCBCCHHHHHHCHHHHHSCSSC
T ss_pred -------------------CCCccccHHHHHHHHhccCC-CCceeeechhccchhhhccccCCchhhhhhhhhhcCChhh
Confidence 12469999999999987643 457777653210 11 023444443210 00010111
Q ss_pred hCCCCC-eeEEEeeCCCCCCCccccCCCc--EEEEEEeEEEEEEeCCCCCCC-CcccccCCcccccccccCCcceeeecc
Q 021159 164 LGCYPE-AVNLWIGNQLSETSFHKDHYEN--LYTVVSGQKHFLLLPPTDVHR-MYIRQYPAAHYSYSRVNDVERFTLELE 239 (316)
Q Consensus 164 ~~~~~~-~~~lwiG~~gs~t~~H~D~~~n--~~~qv~G~Kr~~L~pP~~~~~-ly~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (316)
+...|. ..++|||++||.|++|+|+..+ ++++|.|+|+|+|+||.+... +|..- ..
T Consensus 141 ~~~rP~~~r~l~mGp~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~~y~~~------~~-------------- 200 (371)
T 3k3o_A 141 VFERPNVQKYCLMSVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECW------SS-------------- 200 (371)
T ss_dssp SSCCCCCSCEEEEECTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHH------HT--------------
T ss_pred hccCCCceeEEEEcCCCCCCCeEECCCCCceeEEEeeeEEEEEEECCCcccccccccc------cc--------------
Confidence 222343 5799999999999999998887 679999999999999998753 34221 00
Q ss_pred CCcccccccccCCCCCccccccccccCCCccCCCccEEEEEcCCCEEeeC-cCcceeeecCCcchhhhccc
Q 021159 240 EPVRYVPWCSVNPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLL-IWFRKAVRNSEVNVVELMQA 309 (316)
Q Consensus 240 ~~~~~~~~s~vd~~~~~~~~~pd~~~fP~~~~~~~~~~~~L~pGD~LfiP-gWwH~vv~~~~~~v~~~~~~ 309 (316)
...+.+.|+.... +++++|+|+|||+|||| ||||+ |.+.+.||+++-+|
T Consensus 201 -------------------s~~~~e~~~~~~~-~~~~ev~l~pGEtLfIPsGWwH~-V~nledSIai~~NF 250 (371)
T 3k3o_A 201 -------------------SSNQNEMFFGDQV-DKCYKCSVKQGQTLFIPTGWIHA-VLTPVDCLAFGGNF 250 (371)
T ss_dssp -------------------STTGGGSCGGGTS-SCCEEEEEETTCEEEECTTCEEE-EEEEEEEEEEEEEE
T ss_pred -------------------CCccchhhccccc-CceEEEEECCCcEEEeCCCCeEE-EecCCCeEEECCcc
Confidence 0001122322223 78999999999999999 99999 77888888876554
No 8
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=99.94 E-value=2.6e-27 Score=231.74 Aligned_cols=214 Identities=19% Similarity=0.220 Sum_probs=150.5
Q ss_pred CceeeeC-CCCCHHHHHHHhhcCCCCEEEEcCC---CCCCCccccCCCChhhHHHhcC-CCCcEEEEeccCCCCCccccc
Q 021159 20 STIERLE-SPPTPLQFLRDYVSQNKPCIIKNVS---LHHQWPAFSLWPHPSYLSKTLS-SSPPVSVHLSPNGRADSLVTL 94 (316)
Q Consensus 20 ~~I~ri~-~~~s~~~F~~~y~~~~~PvVi~g~~---~~~~WpA~~~Wt~~eyL~~~~G-~~~~V~V~~~~~~~~d~~~~~ 94 (316)
.-|.+++ ..++.+.|.+.. .++||||++.. . .||+ .+||. +|+++.+| +. .|+|.-+..
T Consensus 136 ~~v~~~~~~~~~~~~~~~~~--~~~Pvli~~~~~lg~--~~P~-~~~t~-~~v~~~~G~d~-~V~V~Dv~~--------- 199 (488)
T 3kv5_D 136 EIIIKMHGSQLTQRYLEKHG--FDVPIMVPKLDDLGL--RLPS-PTFSV-MDVERYVGGDK-VIDVIDVAR--------- 199 (488)
T ss_dssp GTCEECCGGGCCHHHHHHHC--SCSCEEECSCTTTCC--BCCC-TTCCH-HHHHHHHCTTC-EEEEEETTT---------
T ss_pred heeeccccccchHHHHHhcC--CCCCEEEecCCCcCC--cCCC-CCCcH-HHHHHHhCCCc-eeeeeecCc---------
Confidence 3577777 468888776543 58999999754 4 7998 89997 99999999 55 888763211
Q ss_pred CCCCCCcccccccccceeeecHHHHHHHHhccCCCCccccccccccccchhhhhhhcccccchh-hh------HHhh---
Q 021159 95 THPRSGEISQCFASAHVERLPFDEALQLVSNSKNGDVVAYLQQQNDCFRDEYSVLGSDCDEHIA-WA------TEAL--- 164 (316)
Q Consensus 95 ~~~~~g~~~~~F~~~~~~~mt~~efl~~~~~~~~~~~~~Yl~~~~~~l~~~~p~L~~D~~~~~p-~~------~~~~--- 164 (316)
.....|+|++|++++.+..+ ...+|+.+.. +.. . .|.+++. +| +. ..+.
T Consensus 200 --------------Q~~~~m~l~~yi~y~~~~~r-~~~~nv~sle--fs~-~-~L~~~~~--~P~~~~~~d~~~~~wp~~ 258 (488)
T 3kv5_D 200 --------------QADSKMTLHNYVKYFMNPNR-PKVLNVISLE--FSD-T-KMSELVE--VPDIAKKLSWVENYWPDD 258 (488)
T ss_dssp --------------TEEEEEEHHHHHHHHHSSSC-SSCEEEEEEE--CTT-S-GGGGGCB--CCHHHHHHCHHHHHCCTT
T ss_pred --------------cccccccHHHHHHHHhccCC-cccccccccc--ccc-c-hhhccCC--CChhhhhhchhhhcCccc
Confidence 12468999999999998633 3456665532 211 1 2555553 33 11 1111
Q ss_pred --C-CCCCeeEEEeeCCCCCCCccccCCCc--EEEEEEeEEEEEEeCCCCCC-CCcccccCCcccccccccCCcceeeec
Q 021159 165 --G-CYPEAVNLWIGNQLSETSFHKDHYEN--LYTVVSGQKHFLLLPPTDVH-RMYIRQYPAAHYSYSRVNDVERFTLEL 238 (316)
Q Consensus 165 --~-~~~~~~~lwiG~~gs~t~~H~D~~~n--~~~qv~G~Kr~~L~pP~~~~-~ly~~~~~~~~~~~~~~~~~~~~~~~~ 238 (316)
. +.....++|||++||+|++|+|++.| +++||.|+|+|+||||.+.. .+|..
T Consensus 259 ~~~~rP~~~r~~~mG~~gS~T~~H~D~~~t~~w~~vv~G~K~w~L~PPt~~~~~~y~~---------------------- 316 (488)
T 3kv5_D 259 SVFPKPFVQKYCLMGVQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYES---------------------- 316 (488)
T ss_dssp CSSCCCCCSCEEEEECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHH----------------------
T ss_pred ccccCcccceEEEEcCCCCCCCeEECCCCCceeeeccCeeEEEEEeCCcccccccccc----------------------
Confidence 1 11235799999999999999999888 67999999999999998764 23321
Q ss_pred cCCcccccccccCCCCCccccccccccCCCccCCCccEEEEEcCCCEEeeC-cCcceeeecCCcchhhhcccCc
Q 021159 239 EEPVRYVPWCSVNPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLL-IWFRKAVRNSEVNVVELMQAKH 311 (316)
Q Consensus 239 ~~~~~~~~~s~vd~~~~~~~~~pd~~~fP~~~~~~~~~~~~L~pGD~LfiP-gWwH~vv~~~~~~v~~~~~~~~ 311 (316)
|+. ..++.+.|+.... +++++|+|+|||+|||| ||||+ |.+++.||+++-+|-|
T Consensus 317 --------~~~---------~~~~~~~~~~~~~-~~~~~~~l~pGe~lfIPsGWwH~-V~nledsIai~~NF~~ 371 (488)
T 3kv5_D 317 --------WSS---------SVTQSEVFFGDKV-DKCYKCVVKQGHTLFVPTGWIHA-VLTSQDCMAFGGNFLH 371 (488)
T ss_dssp --------HHT---------CSSGGGSCGGGSS-SCCEEEEEETTCEEEECTTCEEE-EEEEEEEEEEEEEECC
T ss_pred --------ccc---------CCccchhhhcccc-cceEEEeeCCCCEEEeCCCceEE-eeCCCCeEEEccccCC
Confidence 110 1122345555554 78999999999999999 99999 7788999988776643
No 9
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=99.94 E-value=1.1e-26 Score=220.43 Aligned_cols=211 Identities=19% Similarity=0.224 Sum_probs=147.1
Q ss_pred ceeeeC-CCCCHHHHHHHhhcCCCCEEEEcCC---CCCCCccccCCCChhhHHHhcC-CCCcEEEEeccCCCCCcccccC
Q 021159 21 TIERLE-SPPTPLQFLRDYVSQNKPCIIKNVS---LHHQWPAFSLWPHPSYLSKTLS-SSPPVSVHLSPNGRADSLVTLT 95 (316)
Q Consensus 21 ~I~ri~-~~~s~~~F~~~y~~~~~PvVi~g~~---~~~~WpA~~~Wt~~eyL~~~~G-~~~~V~V~~~~~~~~d~~~~~~ 95 (316)
.|.+++ ..++.+-|.+. ..++||||++.. . .||+ .+||. +|+++.+| +. .|+|.-+..
T Consensus 46 ~v~~i~g~d~t~~y~~~~--~~~~Pvli~~~~glg~--~~P~-~~~tv-~~v~~~vG~d~-~V~ViDv~~---------- 108 (397)
T 3kv9_A 46 IIIKMHGSQLTQRYLEKH--GFDVPIMVPKLDDLGL--RLPS-PTFSV-MDVERYVGGDK-VIDVIDVAR---------- 108 (397)
T ss_dssp TCEECCTTTCCHHHHHHH--CSCSCEEESSCTTSCC--BCCC-TTCCH-HHHHHHHTTTS-EEEEEETTT----------
T ss_pred eeecCCHHHhhHHHHHhc--CCCCcEEEecCccccC--cCCC-CCCCH-HHHHHHhCCCc-eEeeeecCc----------
Confidence 689998 47899976554 368999999754 4 7999 89997 99999999 65 888863211
Q ss_pred CCCCCcccccccccceeeecHHHHHHHHhccCCCCccccccccccccchhhhhhhcccccchh-hh------HHhh----
Q 021159 96 HPRSGEISQCFASAHVERLPFDEALQLVSNSKNGDVVAYLQQQNDCFRDEYSVLGSDCDEHIA-WA------TEAL---- 164 (316)
Q Consensus 96 ~~~~g~~~~~F~~~~~~~mt~~efl~~~~~~~~~~~~~Yl~~~~~~l~~~~p~L~~D~~~~~p-~~------~~~~---- 164 (316)
.....|+|++|++++.+..+ ...+|+.+.. +.. . .|.+++. +| +. ..++
T Consensus 109 -------------Q~~~~M~l~~yv~Y~~~~~r-~~~lnvisle--fs~-~-~L~~~~~--~P~~v~d~Dwv~~~wp~~~ 168 (397)
T 3kv9_A 109 -------------QADSKMTLHNYVKYFMNPNR-PKVLNVISLE--FSD-T-KMSELVE--VPDIAKKLSWVENYWPDDS 168 (397)
T ss_dssp -------------TEEEEEEHHHHHHHHHCSSC-SSCEEEEEEE--CTT-S-GGGGGCB--CCHHHHHHCHHHHHCCTTC
T ss_pred -------------ccCccccHHHHHHHHhccCC-Cccceecchh--hcc-c-hhccCcC--CCceeeccchhhhcCCchh
Confidence 12468999999999998643 3466666532 211 1 2444432 23 11 1111
Q ss_pred -CCCC-CeeEEEeeCCCCCCCccccCCCc--EEEEEEeEEEEEEeCCCCCC-CCcccccCCcccccccccCCcceeeecc
Q 021159 165 -GCYP-EAVNLWIGNQLSETSFHKDHYEN--LYTVVSGQKHFLLLPPTDVH-RMYIRQYPAAHYSYSRVNDVERFTLELE 239 (316)
Q Consensus 165 -~~~~-~~~~lwiG~~gs~t~~H~D~~~n--~~~qv~G~Kr~~L~pP~~~~-~ly~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (316)
...| ...++|||++||.|++|+|+..+ +++||.|+|+|+|+||.+.+ .+|.. +..
T Consensus 169 ~~~rP~v~r~l~mGp~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~ly~~------~~~-------------- 228 (397)
T 3kv9_A 169 VFPKPFVQKYCLMGVQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYES------WSS-------------- 228 (397)
T ss_dssp SSCCCCCSCEEEEECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHH------HHT--------------
T ss_pred ccCCccceeEEEEcCCCCCCCEEECCCCCceeeeecCceEEEEEeCCcccccccccc------ccc--------------
Confidence 1112 35799999999999999998877 78999999999999999875 34421 100
Q ss_pred CCcccccccccCCCCCccccccccccCCCccCCCccEEEEEcCCCEEeeC-cCcceeeecCCcchhhhccc
Q 021159 240 EPVRYVPWCSVNPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLL-IWFRKAVRNSEVNVVELMQA 309 (316)
Q Consensus 240 ~~~~~~~~s~vd~~~~~~~~~pd~~~fP~~~~~~~~~~~~L~pGD~LfiP-gWwH~vv~~~~~~v~~~~~~ 309 (316)
..++.+.|+.... +++++|+|+|||+|||| ||||+ |.+.+.||+++-+|
T Consensus 229 -------------------s~~~~e~~~~~~~-~~~~~v~l~pGe~lfIPsGW~H~-V~nledSIai~~NF 278 (397)
T 3kv9_A 229 -------------------SVTQSEVFFGDKV-DKCYKCVVKQGHTLFVPTGWIHA-VLTSQDCMAFGGNF 278 (397)
T ss_dssp -------------------SGGGGGSCGGGGS-SCCEEEEEETTCEEEECTTCEEE-EEEEEEEEEEEEEE
T ss_pred -------------------CCCcchhhhcccc-CceEEEEECCCCEEEeCCCCeEE-ccCCcCeEEECCcc
Confidence 0011223322233 78999999999999999 99999 77888898876555
No 10
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=99.94 E-value=5.2e-27 Score=222.13 Aligned_cols=231 Identities=19% Similarity=0.234 Sum_probs=153.5
Q ss_pred HHHhhhhcCCCCC-ceeeeC-CCCCHHHHHHHhhcCCCCEEEEcCC---CCCCCccccCCCChhhHHHhcC-CCCcEEEE
Q 021159 8 WDEVRELSLGSNS-TIERLE-SPPTPLQFLRDYVSQNKPCIIKNVS---LHHQWPAFSLWPHPSYLSKTLS-SSPPVSVH 81 (316)
Q Consensus 8 ~~~~~~~~~~~~~-~I~ri~-~~~s~~~F~~~y~~~~~PvVi~g~~---~~~~WpA~~~Wt~~eyL~~~~G-~~~~V~V~ 81 (316)
+.+.+.-.+.++. -|.+++ ..++.+-|.+.. -++|+||++.. . .||+ .+||. +|+++.+| +. .|.|.
T Consensus 31 i~~~~~~~~~~~~~~v~~~~g~~f~~~yl~~~g--~~~Pvli~~~~glgm--~~P~-~~~tv-~~v~~~vG~d~-~V~Vi 103 (392)
T 3pua_A 31 IKELRSRTFPSAEDVVARVPGSQLTLGYMEEHG--FTEPILVPKKDGLGL--AVPA-PTFYV-SDVENYVGPER-SVDVT 103 (392)
T ss_dssp HHHHHHCCCCBGGGTSEECCGGGCCHHHHHHHT--TCSCEEESSCTTTTC--BCCC-TTCCH-HHHHHHHCTTC-EEEEE
T ss_pred HHHHHhCCCCChHHeEecCChhhchHHHHHhcC--CCccEEEeCCccccC--cCCC-CCCCH-HHHHHHcCCCc-EEeee
Confidence 3344444445444 356776 356766554433 48999998643 5 7998 78997 99999999 55 88875
Q ss_pred eccCCCCCcccccCCCCCCcccccccccceeeecHHHHHHHHhccCCCCcccccccccc---ccc--hhhhhhhcccccc
Q 021159 82 LSPNGRADSLVTLTHPRSGEISQCFASAHVERLPFDEALQLVSNSKNGDVVAYLQQQND---CFR--DEYSVLGSDCDEH 156 (316)
Q Consensus 82 ~~~~~~~d~~~~~~~~~~g~~~~~F~~~~~~~mt~~efl~~~~~~~~~~~~~Yl~~~~~---~l~--~~~p~L~~D~~~~ 156 (316)
-+.. .....|+|++|++++.+.. ....+|+-+... .|. -+.|++..|+. -
T Consensus 104 Dv~~-----------------------Q~~~~M~l~~yv~Y~~~~~-re~~lnv~dlefs~t~L~~~~~~P~lv~d~d-~ 158 (392)
T 3pua_A 104 DVTK-----------------------QKDCKMKLKEFVDYYYSTN-RKRVLNVTNLEFSDTRMSSFVEPPDIVKKLS-W 158 (392)
T ss_dssp ETTT-----------------------TEEEEEEHHHHHHHHTCSS-CCSCEEEEEEECTTSGGGGGCBCCHHHHHHC-H
T ss_pred ecCc-----------------------CcCccccHHHHHHHHhccC-CCcceEeeecccccchhhccccCchhhhhhh-h
Confidence 3211 1246899999999998864 345777775321 011 13456666542 0
Q ss_pred hh--hhHHhhCCCCC-eeEEEeeCCCCCCCccccCCCc--EEEEEEeEEEEEEeCCCCCCC-CcccccCCcccccccccC
Q 021159 157 IA--WATEALGCYPE-AVNLWIGNQLSETSFHKDHYEN--LYTVVSGQKHFLLLPPTDVHR-MYIRQYPAAHYSYSRVND 230 (316)
Q Consensus 157 ~p--~~~~~~~~~~~-~~~lwiG~~gs~t~~H~D~~~n--~~~qv~G~Kr~~L~pP~~~~~-ly~~~~~~~~~~~~~~~~ 230 (316)
++ |..+.+...|. ..++|||++||.|++|+|+..+ ++++++|+|+|+|+||.+... +|..
T Consensus 159 v~~~wp~~~~~~rP~v~r~~~mGp~gS~T~fHiD~~gTs~w~~vi~GrK~w~L~PPt~~nl~~y~~-------------- 224 (392)
T 3pua_A 159 VENYWPDDALLAKPKVTKYCLICVKDSYTDFHIDSGGASAWYHVLKGEKTFYLIRPASANISLYER-------------- 224 (392)
T ss_dssp HHHHSCTTCSSCCCSCSCEEEEECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHH--------------
T ss_pred hhhccchhhhhcCCCceeEEEEeCCCCCCCEeECCCCCceeeeeccceEEEEEECCCcccccchhh--------------
Confidence 11 22222333343 7899999999999999998755 789999999999999988643 2211
Q ss_pred CcceeeeccCCcccccccccCCCCCccccccccccCCCccCCCccEEEEEcCCCEEeeC-cCcceeeecCCcchhhhccc
Q 021159 231 VERFTLELEEPVRYVPWCSVNPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLL-IWFRKAVRNSEVNVVELMQA 309 (316)
Q Consensus 231 ~~~~~~~~~~~~~~~~~s~vd~~~~~~~~~pd~~~fP~~~~~~~~~~~~L~pGD~LfiP-gWwH~vv~~~~~~v~~~~~~ 309 (316)
|+. ...+.+.|+.... +.+++|+|+|||+|||| ||||+ |.+.+.||+++-+|
T Consensus 225 ----------------~~~---------s~~~~e~~~~~~~-~~~~ev~l~pGEtlfIPsGWwH~-V~nledSIai~gNF 277 (392)
T 3pua_A 225 ----------------WRS---------ASNHSEMFFADQV-DKCYKCIVKQGQTLFIPSGWIYA-TLTPVDCLAFAGHF 277 (392)
T ss_dssp ----------------HHH---------STTGGGSCGGGGS-SCCEEEEEETTCEEEECTTCEEE-EEEEEEEEEEEEEE
T ss_pred ----------------ccc---------Ccchhhhhhcccc-cceEEEEECCCcEEeeCCCceEE-EecCCCEEEEcCcc
Confidence 100 0011222322222 67899999999999999 99999 77888888876655
Q ss_pred Cc
Q 021159 310 KH 311 (316)
Q Consensus 310 ~~ 311 (316)
=|
T Consensus 278 l~ 279 (392)
T 3pua_A 278 LH 279 (392)
T ss_dssp CC
T ss_pred cC
Confidence 43
No 11
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=99.93 E-value=1.3e-26 Score=223.77 Aligned_cols=210 Identities=16% Similarity=0.195 Sum_probs=143.1
Q ss_pred eeeeC-CCCCHHHHHHHhhcCCCCEEEEc---CCCCCCCccccCCCChhhHHHhcC-CCCcEEEEeccCCCCCcccccCC
Q 021159 22 IERLE-SPPTPLQFLRDYVSQNKPCIIKN---VSLHHQWPAFSLWPHPSYLSKTLS-SSPPVSVHLSPNGRADSLVTLTH 96 (316)
Q Consensus 22 I~ri~-~~~s~~~F~~~y~~~~~PvVi~g---~~~~~~WpA~~~Wt~~eyL~~~~G-~~~~V~V~~~~~~~~d~~~~~~~ 96 (316)
|.+++ ..++.+-|.+.. -++|+||++ +.. .||+. +||. +|+++.+| +. .|.|.-..
T Consensus 103 ~~~~~g~~~~~~~~~~~~--~~~Pvli~~~~glgm--~~P~~-~~tv-~~v~~~~G~d~-~V~ViDv~------------ 163 (447)
T 3kv4_A 103 ILKPTGNQLTVEFLEENS--FSVPILVLKKDGLGM--TLPSP-SFTV-RDVEHYVGSDK-EIDVIDVT------------ 163 (447)
T ss_dssp CBCCCTTTCCHHHHHHTT--SCSCEEESSCTTSCC--BCCCT-TCCH-HHHHHHHCTTC-EEEEEETT------------
T ss_pred eeccchhhchHHHHHhcC--CCCCEEEecCcccCC--cCCCc-cCCH-HHHHHHcCCCc-eEcceecC------------
Confidence 33444 345555554432 389999984 446 79986 8997 99999999 55 88876321
Q ss_pred CCCCcccccccccceeeecHHHHHHHHhccCCCCccccccccccccchhhhhhhcccccchh-hhHH------h-----h
Q 021159 97 PRSGEISQCFASAHVERLPFDEALQLVSNSKNGDVVAYLQQQNDCFRDEYSVLGSDCDEHIA-WATE------A-----L 164 (316)
Q Consensus 97 ~~~g~~~~~F~~~~~~~mt~~efl~~~~~~~~~~~~~Yl~~~~~~l~~~~p~L~~D~~~~~p-~~~~------~-----~ 164 (316)
+....+|+|++|++.+.+..+ ...+|+.+.. +... .|.+++. +| +..+ . +
T Consensus 164 -----------~Q~~~~M~l~~y~dy~~~~~r-~~~lnv~d~e--fs~~--~L~~~~~--~P~~~~~~D~~~~lw~~~~~ 225 (447)
T 3kv4_A 164 -----------RQADCKMKLGDFVKYYYSGKR-EKVLNVISLE--FSDT--RLSNLVE--TPKIVRKLSWVENLWPEECV 225 (447)
T ss_dssp -----------TTEEEEEEHHHHHHHHHSSCC-SSCEEEEEEE--CTTS--GGGGGCB--CCHHHHHHCHHHHHCCSCTT
T ss_pred -----------cCccccccHHHHHHHHhccCC-CCceeecccc--cccc--hhhhccC--CCceecccchhhhcccchhh
Confidence 112469999999999988643 4577776532 2111 3666653 34 2211 1 2
Q ss_pred CCCC-CeeEEEeeCCCCCCCccccCCCc--EEEEEEeEEEEEEeCCCCCCC-CcccccCCcccccccccCCcceeeeccC
Q 021159 165 GCYP-EAVNLWIGNQLSETSFHKDHYEN--LYTVVSGQKHFLLLPPTDVHR-MYIRQYPAAHYSYSRVNDVERFTLELEE 240 (316)
Q Consensus 165 ~~~~-~~~~lwiG~~gs~t~~H~D~~~n--~~~qv~G~Kr~~L~pP~~~~~-ly~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (316)
...| ...++|||++||.|++|+|+..+ ++++|.|+|+|+||||..... +|..
T Consensus 226 ~~rP~v~r~~~mG~~gS~T~~HiD~~~ts~w~~vi~GrK~w~L~PPt~~nl~~~~~------------------------ 281 (447)
T 3kv4_A 226 FERPNVQKYCLMSVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFEC------------------------ 281 (447)
T ss_dssp SCCCCCSCEEEEECTTEEEEEECCGGGCEEEEEEEESEEEEEEECCCHHHHHHHHH------------------------
T ss_pred ccCCCceeEEEEeCCCCCCCeeECCCCCceeEEEeeeEEEEEEeCCCcccccchhh------------------------
Confidence 2234 37899999999999999998887 679999999999999997642 2211
Q ss_pred CcccccccccCCCCCccccccccccCCCccCCCccEEEEEcCCCEEeeC-cCcceeeecCCcchhhhccc
Q 021159 241 PVRYVPWCSVNPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLL-IWFRKAVRNSEVNVVELMQA 309 (316)
Q Consensus 241 ~~~~~~~s~vd~~~~~~~~~pd~~~fP~~~~~~~~~~~~L~pGD~LfiP-gWwH~vv~~~~~~v~~~~~~ 309 (316)
|. . ..++.+.|+.... +++++|+|+|||+|||| ||||+ |.+.+.+|+++-+|
T Consensus 282 ------~~---~------s~~~~~~~~~~~~-~~~~~v~l~pGetlfIPsGWwH~-V~nledsIai~~NF 334 (447)
T 3kv4_A 282 ------WS---S------SSNQNEMFFGDQV-DKCYKCSVKQGQTLFIPTGWIHA-VLTPVDCLAFGGNF 334 (447)
T ss_dssp ------HH---T------CSSGGGSCGGGGS-SCCEEEEEETTCEEEECTTCEEE-EEESSCEEEEEEEE
T ss_pred ------cc---c------Ccchhhhhccccc-cceEEEEECCCcEEecCCCCeEE-EecCCCEEEEcccc
Confidence 10 0 0111233333333 78999999999999999 99999 77889898876555
No 12
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=99.84 E-value=1.6e-21 Score=189.05 Aligned_cols=193 Identities=19% Similarity=0.202 Sum_probs=106.9
Q ss_pred CCCCCHHHHHHHhhcCCCCEEEEcCCCCCC-Ccccc-CCCChhhHHHhcCCCCcEE---EEeccCCCCCcccccCCCCCC
Q 021159 26 ESPPTPLQFLRDYVSQNKPCIIKNVSLHHQ-WPAFS-LWPHPSYLSKTLSSSPPVS---VHLSPNGRADSLVTLTHPRSG 100 (316)
Q Consensus 26 ~~~~s~~~F~~~y~~~~~PvVi~g~~~~~~-WpA~~-~Wt~~eyL~~~~G~~~~V~---V~~~~~~~~d~~~~~~~~~~g 100 (316)
-.++|.++|+++|+ .++|++|++... + |+++. .|+. ++|.+..+.. .+. |.+++. .+ |
T Consensus 23 l~~is~e~F~~~yw-~kkPllIr~~~~--~~~~~f~~l~s~-~~L~~La~~~-~v~~~~v~~~r~--~~----------g 85 (442)
T 2xdv_A 23 ISPIKTETFFKEFW-EQKPLLIQRDDP--ALATYYGSLFKL-TDLKSLCSRG-MYYGRDVNVCRC--VN----------G 85 (442)
T ss_dssp TTTSCHHHHHHHTT-TTSCEEECCCCH--HHHHHHHHHCCH-HHHSSCC-------------------------------
T ss_pred hcCCCHHHHHHHhh-hhCcEEeecCCc--chhhhhcCcCCH-HHHHHHHccC-cccccccceeee--cC----------C
Confidence 34699999999999 569999999766 4 88885 5675 9999887754 332 111000 00 0
Q ss_pred cccccccccceeeecHHHHHHHHhccCCCCccccccccccccchhhhhhhcccccchhhhHHhhCCCCCeeEEEeeCCCC
Q 021159 101 EISQCFASAHVERLPFDEALQLVSNSKNGDVVAYLQQQNDCFRDEYSVLGSDCDEHIAWATEALGCYPEAVNLWIGNQLS 180 (316)
Q Consensus 101 ~~~~~F~~~~~~~mt~~efl~~~~~~~~~~~~~Yl~~~~~~l~~~~p~L~~D~~~~~p~~~~~~~~~~~~~~lwiG~~gs 180 (316)
. ...+ . .....++.++.+.+.+. +..+-+.. .....|.|+. +.. .....+|. ....|+|+|++|+
T Consensus 86 ~-~~~~-~-~~g~~~~~~l~~~~~~~---g~tL~l~~----~~~~~p~L~~-l~~---~l~~~~g~-~~~~n~y~~~~g~ 150 (442)
T 2xdv_A 86 K-KKVL-N-KDGKAHFLQLRKDFDQK---RATIQFHQ----PQRFKDELWR-IQE---KLECYFGS-LVGSNVYITPAGS 150 (442)
T ss_dssp --------------------CCEEEE---TTEEEEEC----GGGTCHHHHH-HHH---HHHHHHTS-CCEEEEEEECTTC
T ss_pred c-ceee-c-CCCccCHHHHHHHhccC---CcEEEeCc----hhhhhhHHHH-HHH---HHHHHhCC-CcccceEECCCCC
Confidence 0 0000 0 00111111221111110 11111111 1112233331 110 01124554 4578999999999
Q ss_pred CC-CccccCCCcEEEEEEeEEEEEEeCCCCCCCCcccccCCcccccccccCCcceeeeccCCcccccccccCCCCCcccc
Q 021159 181 ET-SFHKDHYENLYTVVSGQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELEEPVRYVPWCSVNPYPSPETR 259 (316)
Q Consensus 181 ~t-~~H~D~~~n~~~qv~G~Kr~~L~pP~~~~~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~vd~~~~~~~~ 259 (316)
.+ ++|||.++||++||.|+|||+|++|.+. ++. . +.+|. .
T Consensus 151 ~g~~~H~D~~dvf~~Qv~G~Krw~l~~p~~p-------l~~---------~-----------------~s~d~------~ 191 (442)
T 2xdv_A 151 QGLPPHYDDVEVFILQLEGEKHWRLYHPTVP-------LAR---------E-----------------YSVEA------E 191 (442)
T ss_dssp BCSCSEECSSEEEEEEEESCEEEEEECCSST-------TCS---------S-----------------CEECC------T
T ss_pred CCccceECCcceEEEEEEeEEEEEEccCCCC-------ccc---------c-----------------CCCCc------h
Confidence 86 9999999999999999999999999862 110 0 11232 1
Q ss_pred ccccccCCCccCCCccEEEEEcCCCEEeeC-cCcceeeec
Q 021159 260 ESEMAKFPLYFNGPKPFECTVNAGEILYLL-IWFRKAVRN 298 (316)
Q Consensus 260 ~pd~~~fP~~~~~~~~~~~~L~pGD~LfiP-gWwH~vv~~ 298 (316)
| +| . .+.++++|+|||+|||| ||||+|.+.
T Consensus 192 --~--~~---~--~~~~~~~L~pGD~LYiP~g~~H~~~s~ 222 (442)
T 2xdv_A 192 --E--RI---G--RPVHEFMLKPGDLLYFPRGTIHQADTP 222 (442)
T ss_dssp --T--TS---C--SCSEEEEECTTCEEEECTTCEEEEECC
T ss_pred --h--hc---C--CcceEEEECCCcEEEECCCceEEEEec
Confidence 1 22 1 56799999999999999 999995443
No 13
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=99.82 E-value=2e-19 Score=174.41 Aligned_cols=91 Identities=18% Similarity=0.285 Sum_probs=68.8
Q ss_pred hhCCCCCeeEEEeeCCCCCC-CccccCCCcEEEEEEeEEEEEEeCCCCCCCCcccccCCcccccccccCCcceeeeccCC
Q 021159 163 ALGCYPEAVNLWIGNQLSET-SFHKDHYENLYTVVSGQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELEEP 241 (316)
Q Consensus 163 ~~~~~~~~~~lwiG~~gs~t-~~H~D~~~n~~~qv~G~Kr~~L~pP~~~~~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (316)
.||+ ....|+|++++|+.+ ++|+|.++||++||.|+|+|+|++|.+...+++...
T Consensus 159 ~fg~-~v~~N~Y~tp~Gs~g~~pH~D~~DvFllQv~G~KrWrL~~P~~~~~~lp~~~----------------------- 214 (489)
T 4diq_A 159 QFGS-MAGSNVYLTPPNSQGFAPHYDDIEAFVLQLEGRKLWRVYRPRAPTEELALTS----------------------- 214 (489)
T ss_dssp HHTS-CEEEEEEEECSSBCCSCCBCCSSEEEEEEEEECEEEEEECCSSGGGTTCSSC-----------------------
T ss_pred HhCC-cccceEEecCCCcccccCccCCcceEEEEEeeEEEEEEeCCCCccccCCCcc-----------------------
Confidence 4554 447899999999864 999999999999999999999999998754443210
Q ss_pred cccccccccCCCCCccccccccccCCCccCCCccEEEEEcCCCEEeeC-cCcceeeec
Q 021159 242 VRYVPWCSVNPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLL-IWFRKAVRN 298 (316)
Q Consensus 242 ~~~~~~s~vd~~~~~~~~~pd~~~fP~~~~~~~~~~~~L~pGD~LfiP-gWwH~vv~~ 298 (316)
..|. ..++. ..+.++++|+|||+|||| ||||+|++.
T Consensus 215 -------~~~~------~~~~~--------~~p~~e~~L~pGDvLYiP~g~~H~~~s~ 251 (489)
T 4diq_A 215 -------SPNF------SQDDL--------GEPVLQTVLEPGDLLYFPRGFIHQAECQ 251 (489)
T ss_dssp -------CCCC------CGGGC--------CCCSEEEEECTTCEEEECTTCEEEEEBC
T ss_pred -------cccC------Ccccc--------cCcceEEEECCCCEEEECCCCceEEEec
Confidence 1121 11111 167899999999999999 999995444
No 14
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=99.71 E-value=3.6e-17 Score=158.97 Aligned_cols=210 Identities=17% Similarity=0.197 Sum_probs=127.0
Q ss_pred CCHHHHHHHhhcCC------CCEEEEc---CCCCCCCccccCCCChhhHHHhcCCCCcEEEEeccCCCCCcccccCCCCC
Q 021159 29 PTPLQFLRDYVSQN------KPCIIKN---VSLHHQWPAFSLWPHPSYLSKTLSSSPPVSVHLSPNGRADSLVTLTHPRS 99 (316)
Q Consensus 29 ~s~~~F~~~y~~~~------~PvVi~g---~~~~~~WpA~~~Wt~~eyL~~~~G~~~~V~V~~~~~~~~d~~~~~~~~~~ 99 (316)
.+..+|...|...+ +|++|++ +.- .-|. ...+. +.+.+.+|..+.|.|--..
T Consensus 151 ~dG~~f~~~~~~~~g~~~f~~p~lv~~~dgLgm--~~P~-~~ftv-~dV~~~vG~d~~VdVIDV~--------------- 211 (528)
T 3pur_A 151 EDGYEFRREFEKLGGADNWGKVFMVKDMDGLNM--TMPK-PGFDL-EDVVKIMGSDYEVDTIDVY--------------- 211 (528)
T ss_dssp EEHHHHHHHHHHTTCGGGCCSEEEEEECTTSCC--CCCC-TTCCH-HHHHHHHCTTCEEEEEETT---------------
T ss_pred cCchhhHHHHHhhcCcccCCeeEEEeccccCCC--CCCC-CCCCH-HHHHHhhCCCceEeeEECC---------------
Confidence 36677877776544 6999983 332 2332 23454 7899999855488775211
Q ss_pred CcccccccccceeeecHHHHHHHHhccCCCCccccccccccccchhhhhhhccccc-----chhhhHHhh----------
Q 021159 100 GEISQCFASAHVERLPFDEALQLVSNSKNGDVVAYLQQQNDCFRDEYSVLGSDCDE-----HIAWATEAL---------- 164 (316)
Q Consensus 100 g~~~~~F~~~~~~~mt~~efl~~~~~~~~~~~~~Yl~~~~~~l~~~~p~L~~D~~~-----~~p~~~~~~---------- 164 (316)
......||+++|++++.+.......+++-+.. +. +.+.|.+.+.. .+.|....-
T Consensus 212 --------tQ~~~~mtl~~~~~yf~~~~~R~~i~NviSLE--fS-~~~~L~~~v~~P~~Vr~ld~v~~~Wp~~~~~~~~~ 280 (528)
T 3pur_A 212 --------NQSTYSMKLDTFRKLFRDTKNRPLLYNFLSLE--FS-DNNEMKEIAKPPRFVQEISMVNRLWPDVSGAEYIK 280 (528)
T ss_dssp --------TTEEEEEEHHHHHHHHHCCSCCSSCEEECCEE--CT-TSTTHHHHSCCCHHHHHHCHHHHHSCCC-------
T ss_pred --------CCCCCcCcHHHHHHHhcCccccceeeEEeeEE--ec-CchhhhccccCCcEEecccHHHHhcCcccchhhhh
Confidence 01246899999999998743233445554432 11 11122222210 001111110
Q ss_pred ----------CCCC-CeeEEEeeCCCCCCCccccCCCc--EEEEEEeEEEEEEeCCCCCCC-CcccccCCcccccccccC
Q 021159 165 ----------GCYP-EAVNLWIGNQLSETSFHKDHYEN--LYTVVSGQKHFLLLPPTDVHR-MYIRQYPAAHYSYSRVND 230 (316)
Q Consensus 165 ----------~~~~-~~~~lwiG~~gs~t~~H~D~~~n--~~~qv~G~Kr~~L~pP~~~~~-ly~~~~~~~~~~~~~~~~ 230 (316)
+..| ...+++||++|+.|.+|+|+..+ +++++.|+|+|+|+||..... +|.. |
T Consensus 281 ~~~~~~~~~~~~rP~v~rf~lmg~~gS~Td~HiD~~gts~w~~v~~GrK~w~L~PPt~~nl~~y~~------w------- 347 (528)
T 3pur_A 281 LLQREEYLPEDQRPKVEQFCLAGMAGSYTDFHVDFGGSSVYYHILKGEKIFYIAAPTEQNFAAYQA------H------- 347 (528)
T ss_dssp ------CCCGGGSCCCSSEEEEECTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHH------H-------
T ss_pred hhhcccccccccCCCeeEEEEEeCCCCCCCeeECCCCCceeEEEecceEEEEEeCCCccchhhhhh------h-------
Confidence 0112 35799999999999999997664 789999999999999986532 2211 1
Q ss_pred CcceeeeccCCcccccccccCCCCCccccccccccCCCccCCCccEEEEEcCCCEEeeC-cCcceeeecCCcchhhhccc
Q 021159 231 VERFTLELEEPVRYVPWCSVNPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLL-IWFRKAVRNSEVNVVELMQA 309 (316)
Q Consensus 231 ~~~~~~~~~~~~~~~~~s~vd~~~~~~~~~pd~~~fP~~~~~~~~~~~~L~pGD~LfiP-gWwH~vv~~~~~~v~~~~~~ 309 (316)
+. ++ . ...-|+.... ...++|+|+|||+|||| ||||+ |.+.+.+|++.-+|
T Consensus 348 -----------------~~-s~------~--~~~wfgd~l~-~~~~~v~l~pGEtlfIPsGW~Ha-V~tleDSIaiggNF 399 (528)
T 3pur_A 348 -----------------ET-SP------D--TTTWFGDIAN-GAVKRVVIKEGQTLLIPAGWIHA-VLTPVDSLVFGGNF 399 (528)
T ss_dssp -----------------HH-SS------C--CSCCGGGGTT-TCCEEEEEETTCEEEECTTCEEE-EEEEEEEEEEEEEE
T ss_pred -----------------cc-CC------c--hhhhhccccc-ccEEEEEECCCCEEEecCCceEE-EecCCCeEEEcCcc
Confidence 00 00 0 0011111111 45689999999999999 99999 77778888775554
No 15
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=99.02 E-value=3.9e-11 Score=112.20 Aligned_cols=138 Identities=16% Similarity=0.182 Sum_probs=81.0
Q ss_pred CHHHHHHHhhcCCCCEEEEcCCCCCCCccccCCCChhhHHHhcCCCCcEEEEeccCCCCCcccccCCCCCCccccccccc
Q 021159 30 TPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLWPHPSYLSKTLSSSPPVSVHLSPNGRADSLVTLTHPRSGEISQCFASA 109 (316)
Q Consensus 30 s~~~F~~~y~~~~~PvVi~g~~~~~~WpA~~~Wt~~eyL~~~~G~~~~V~V~~~~~~~~d~~~~~~~~~~g~~~~~F~~~ 109 (316)
+..-|.+ +++.++|||++|+.. .-. ...|+. ++|.+.+|+. .+.+--|.++
T Consensus 23 n~~~Fq~-hW~~GePViVs~V~~--~~~-~~~W~P-e~~~~~~gd~-~~~lidC~~~----------------------- 73 (392)
T 2ypd_A 23 NWKLFKE-CWKQGQPAVVSGVHK--KMN-ISLWKA-ESISLDFGDH-QADLLNCKDS----------------------- 73 (392)
T ss_dssp HHHHHHH-HHTTTCCEEECCHHH--HSC-GGGGSH-HHHHHHHTTS-CCCCEETTTC-----------------------
T ss_pred cHHHHHH-HHhCCCcEEEechhh--hCc-CCccCH-HHHHHHhcCc-eeeeeeCCCC-----------------------
Confidence 4567755 667999999999866 222 246997 9999999998 7765433221
Q ss_pred ceeeecHHHHHHHHhccCC------C-Cccccccccc--cccchhhhhhhcccccchhhhHHhh---CC------C----
Q 021159 110 HVERLPFDEALQLVSNSKN------G-DVVAYLQQQN--DCFRDEYSVLGSDCDEHIAWATEAL---GC------Y---- 167 (316)
Q Consensus 110 ~~~~mt~~efl~~~~~~~~------~-~~~~Yl~~~~--~~l~~~~p~L~~D~~~~~p~~~~~~---~~------~---- 167 (316)
....+++.+|.+-+..... + ...+-|.++. ..+...+|...+|+...+|+. ++. |. -
T Consensus 74 ~~~~i~v~~Ff~Gf~~~~~r~~~~~g~p~~LKLKDWPp~~~F~e~lP~~~~df~~~LPlp-EYt~p~G~LNLAs~LP~~~ 152 (392)
T 2ypd_A 74 IISNANVKEFWDGFEEVSKRQKNKSGETVVLKLKDWPSGEDFKTMMPARYEDLLKSLPLP-EYCNPEGKFNLASHLPGFF 152 (392)
T ss_dssp CBCSCCHHHHHHTSSBGGGC------CCCCEEECSSSBTHHHHHHSHHHHHHHHHHCSSH-HHHSTTCTTCCTTTSCGGG
T ss_pred ccccCcHHHHhhhccccccCCcCCCCCcceeeecCCCChHHHHHHhHHHHHHHHHcCCch-HhhCCCccchHHHhCCCCC
Confidence 2357788888887654321 1 1122222221 122233566666665445532 121 11 0
Q ss_pred --C-CeeEEEeeCC--------CCCCCccccCCCcEEEEEE
Q 021159 168 --P-EAVNLWIGNQ--------LSETSFHKDHYENLYTVVS 197 (316)
Q Consensus 168 --~-~~~~lwiG~~--------gs~t~~H~D~~~n~~~qv~ 197 (316)
| -.+.++|+.+ .+.|.+|.|..|.+++++.
T Consensus 153 ~kPDLGPK~YiAYG~~~~~~~~~gvT~LH~DmsDaVNiL~h 193 (392)
T 2ypd_A 153 VRPDLGPRLCSAYGVVAAKDHDIGTTNLHIEVSDVVNILVY 193 (392)
T ss_dssp CC---CCEEEEECCSTTTTCTTCCSEEEEECSSEEEEEEEE
T ss_pred CCCCCCcchhhhcCcchhcccCCCcceeeeehhhhhhhhhe
Confidence 1 2667776442 3579999999987766654
No 16
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=98.02 E-value=7.6e-05 Score=69.05 Aligned_cols=100 Identities=10% Similarity=0.161 Sum_probs=64.5
Q ss_pred CeeEEEeeCCCCCCCccccCCC--cEEEEE-EeEEEEEEeCCCCCCCCccc--ccCCcccccccccCCcceeeeccCCcc
Q 021159 169 EAVNLWIGNQLSETSFHKDHYE--NLYTVV-SGQKHFLLLPPTDVHRMYIR--QYPAAHYSYSRVNDVERFTLELEEPVR 243 (316)
Q Consensus 169 ~~~~lwiG~~gs~t~~H~D~~~--n~~~qv-~G~Kr~~L~pP~~~~~ly~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (316)
..++|+||..|+.|++|.+..+ .+..++ =|.|.|+-+|++....+..- .. + +++ ..
T Consensus 201 n~pqLYig~~gS~t~~H~Ed~~l~SiNynhgp~~~~Wy~VP~e~~~~~e~l~~k~-----------~-----~d~--~~- 261 (332)
T 2xxz_A 201 NTVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFAVHEHYWETISAFCDRH-----------G-----VDY--LT- 261 (332)
T ss_dssp TSEEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHHHHHT-----------T-----CCT--TT-
T ss_pred ChhheEeecCcccccceecCCcceeEEeecCCCceEEEEECHHHHHHHHHHHHhc-----------C-----Cch--hh-
Confidence 4779999999999999998432 233344 48899999999876443210 00 0 000 00
Q ss_pred cccccccCCCCCccccccccccCCCccCCCccEEEEEcCCCEEeeC-cCcceeeecCCcch
Q 021159 244 YVPWCSVNPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLL-IWFRKAVRNSEVNV 303 (316)
Q Consensus 244 ~~~~s~vd~~~~~~~~~pd~~~fP~~~~~~~~~~~~L~pGD~LfiP-gWwH~vv~~~~~~v 303 (316)
. .| ++++ .++.+. +.+.+.++++|||+++++ |-+|+ |-+.++|+
T Consensus 262 ~-~~-----~~~p----~~L~~~-----gIPvyr~~QkpGd~Vi~~PgayH~-v~n~G~~~ 306 (332)
T 2xxz_A 262 G-SW-----WPIL----DDLYAS-----NIPVYRFVQRPGDLVWINAGTVHW-VQATGWCN 306 (332)
T ss_dssp S-CB-----CCCH----HHHHHT-----TCCCEEEEECTTCEEEECTTCEEE-EEESSSEE
T ss_pred c-ee-----cCCH----HHHHhC-----CCCeEEEEECCCCEEEECCCceEE-EEecceee
Confidence 0 01 1111 123322 277899999999999999 99999 77888865
No 17
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=97.86 E-value=6.3e-05 Score=73.69 Aligned_cols=102 Identities=11% Similarity=0.171 Sum_probs=64.7
Q ss_pred CeeEEEeeCCCCCCCccccCCC--cEEEEE-EeEEEEEEeCCCCCCCCcccccCCcccccccccCCcceeeeccCCcccc
Q 021159 169 EAVNLWIGNQLSETSFHKDHYE--NLYTVV-SGQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELEEPVRYV 245 (316)
Q Consensus 169 ~~~~lwiG~~gs~t~~H~D~~~--n~~~qv-~G~Kr~~L~pP~~~~~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (316)
..++|+||..|+.|++|.+..+ .+..++ =|.|.|+-+|+++...+..---.. +. ++ . ..
T Consensus 260 n~pqLYig~~gS~t~~H~E~~~l~SiNynhggg~~~Wy~VP~e~~~k~e~l~~k~---------~~-----~~--~--~~ 321 (531)
T 3avr_A 260 NTVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFVVPEGYWGVLNDFCEKN---------NL-----NF--L--MG 321 (531)
T ss_dssp SSCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHHHHHT---------TC-----CT--T--TS
T ss_pred ChhheEeecCcccccceecCCcceeeEeecCCCCeEEEEeCHHHHHHHHHHHHHc---------CC-----Ch--h--hc
Confidence 4679999999999999998443 233444 468999999998864322110000 00 00 0 00
Q ss_pred cccccCCCCCccccccccccCCCccCCCccEEEEEcCCCEEeeC-cCcceeeecCCcch
Q 021159 246 PWCSVNPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLL-IWFRKAVRNSEVNV 303 (316)
Q Consensus 246 ~~s~vd~~~~~~~~~pd~~~fP~~~~~~~~~~~~L~pGD~LfiP-gWwH~vv~~~~~~v 303 (316)
.| ++++ .++.+. +.+.+.++++|||.++++ |-+|+ |-+.++|+
T Consensus 322 ~~-----~~~p----~~L~~~-----gIPvyr~vQkpGd~Vi~~PgayH~-v~n~G~~~ 365 (531)
T 3avr_A 322 SW-----WPNL----EDLYEA-----NVPVYRFIQRPGDLVWINAGTVHW-VQAIGWCN 365 (531)
T ss_dssp CB-----CCCH----HHHHHT-----TCCCEEEEECTTCEEEECTTCEEE-EEESSSEE
T ss_pred ee-----ecCH----HHHHhC-----CCCeEEEEECCCCEEEECCCceEE-EEecceee
Confidence 01 1111 122221 277799999999999999 99999 77888876
No 18
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=97.44 E-value=0.0025 Score=61.63 Aligned_cols=101 Identities=10% Similarity=0.130 Sum_probs=63.8
Q ss_pred CeeEEEeeCCCCCCCccccCC--CcEEEEE-EeEEEEEEeCCCCCCCCcccccCCcccccccccCCcceeeeccCCcccc
Q 021159 169 EAVNLWIGNQLSETSFHKDHY--ENLYTVV-SGQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELEEPVRYV 245 (316)
Q Consensus 169 ~~~~lwiG~~gs~t~~H~D~~--~n~~~qv-~G~Kr~~L~pP~~~~~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (316)
..++|+||..|+.|++|.+.. ..+..++ =|.|.|+-+|+++...+-.-- . ..+ +++. ..
T Consensus 235 NtpqLYigm~gS~t~wH~Ed~~l~SINynhggg~c~WY~VP~e~~~k~e~l~-------~----k~~---~d~l----~~ 296 (510)
T 4ask_A 235 NTVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFAVHEHYWETISAFC-------D----RHG---VDYL----TG 296 (510)
T ss_dssp TSCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHHH-------H----HTT---CCTT----TS
T ss_pred ChhheEEccccccccceecCCcceeEEEeecCCceeEEEECHHHHHHHHHHH-------H----HhC---cchh----hc
Confidence 467999999999999999843 2334444 568999999998764322100 0 000 0000 00
Q ss_pred cccccCCCCCccccccccccCCCccCCCccEEEEEcCCCEEeeC-cCcceeeecCCcc
Q 021159 246 PWCSVNPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLL-IWFRKAVRNSEVN 302 (316)
Q Consensus 246 ~~s~vd~~~~~~~~~pd~~~fP~~~~~~~~~~~~L~pGD~LfiP-gWwH~vv~~~~~~ 302 (316)
.| +++++ ++.+. +.+.+.++++|||+++++ |=+|. |.+.+++
T Consensus 297 ~~-----~pspe----~L~ka-----gIPvyr~iQkPGdfVit~PgtyH~-Vqs~Gf~ 339 (510)
T 4ask_A 297 SW-----WPILD----DLYAS-----NIPVYRFVQRPGDLVWINAGTVHW-VQATGWC 339 (510)
T ss_dssp CB-----CCCHH----HHHHT-----TCCCEEEEECTTCEEEECTTCEEE-EEESSSE
T ss_pred cc-----cCCHH----HHHhC-----CCCeEEEEECCCCEEEECCCceEE-EEecCee
Confidence 11 11111 22221 267899999999999999 99999 7777874
No 19
>3dxt_A JMJC domain-containing histone demethylation PROT; JMJD2D, histone demethylase, H3K9, jumonji domain-CONT protein 2D, oxidoreductase; 1.80A {Homo sapiens} PDB: 3dxu_A* 4hon_A* 4hoo_A 2w2i_A*
Probab=96.76 E-value=0.002 Score=59.88 Aligned_cols=113 Identities=18% Similarity=0.249 Sum_probs=70.2
Q ss_pred CeeEEEeeCCCCCCCccccCC--CcEEEEEEeE-EEEEEeCCCCCCCCcc---cccCCcccccccccCCcceeeeccCCc
Q 021159 169 EAVNLWIGNQLSETSFHKDHY--ENLYTVVSGQ-KHFLLLPPTDVHRMYI---RQYPAAHYSYSRVNDVERFTLELEEPV 242 (316)
Q Consensus 169 ~~~~lwiG~~gs~t~~H~D~~--~n~~~qv~G~-Kr~~L~pP~~~~~ly~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (316)
..++|++|..+|.+.+|.+.. ..+.-+..|. |.|+.+|+.+...+-. ..+|. .+ . . ...-+.
T Consensus 176 ntP~LYiGm~~Stf~WH~ED~~L~SINYlH~GapK~WY~VP~~~~~kfE~l~k~~~p~-~~-~-~--c~~fL~------- 243 (354)
T 3dxt_A 176 NTPYLYFGMWKTTFAWHTEDMDLYSINYLHLGEPKTWYVVPPEHGQRLERLARELFPG-SS-R-G--CGAFLR------- 243 (354)
T ss_dssp CCCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHHHHHHSHH-HH-H-H--CTTGGG-------
T ss_pred cceeeeeccccCCCcceecCCcceEEEEEecCCceEEEEeCHHHHHHHHHHHHHhCch-hh-h-h--cHHHHh-------
Confidence 477999999999999999843 3345667776 9999999998643211 00000 00 0 0 000000
Q ss_pred ccccccccCCCCCccccccccccCCCccCCCccEEEEEcCCCEEeeC-cCcceeeecCCcchhhhccc
Q 021159 243 RYVPWCSVNPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLL-IWFRKAVRNSEVNVVELMQA 309 (316)
Q Consensus 243 ~~~~~s~vd~~~~~~~~~pd~~~fP~~~~~~~~~~~~L~pGD~LfiP-gWwH~vv~~~~~~v~~~~~~ 309 (316)
..+ ..+.| . .+.+ .+.+.+.++++|||.+++- +.+|. +-|.++|+.+..+|
T Consensus 244 h~~--~lisP------~--~L~~-----~GIpv~~~vQ~pGEfViTfP~aYH~-gfn~Gfn~aEAvNF 295 (354)
T 3dxt_A 244 HKV--ALISP------T--VLKE-----NGIPFNRITQEAGEFMVTFPYGYHA-GFNHGFNCAEAINF 295 (354)
T ss_dssp GCC--EEECH------H--HHHH-----TTCCCEEEEECTTCEEEECTTCEEE-EEESSSEEEEEEEE
T ss_pred cCc--ccCCH------H--HHHH-----CCCceEEEEeCCCcEEEECCCceEE-EeeccccHhHhhcc
Confidence 000 01111 0 1222 2378899999999999999 99999 88889988655443
No 20
>3opt_A DNA damage-responsive transcriptional repressor R; RPH1, histone demethylase, catalytic core, oxidoreductase; HET: DNA AKG; 2.20A {Saccharomyces cerevisiae} PDB: 3opw_A*
Probab=95.85 E-value=0.011 Score=55.24 Aligned_cols=111 Identities=18% Similarity=0.243 Sum_probs=67.7
Q ss_pred CeeEEEeeCCCCCCCccccCCC--cEEEEEEe-EEEEEEeCCCCCCCCccc---ccCCcccccccccCCcceeeeccCCc
Q 021159 169 EAVNLWIGNQLSETSFHKDHYE--NLYTVVSG-QKHFLLLPPTDVHRMYIR---QYPAAHYSYSRVNDVERFTLELEEPV 242 (316)
Q Consensus 169 ~~~~lwiG~~gs~t~~H~D~~~--n~~~qv~G-~Kr~~L~pP~~~~~ly~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (316)
..++|++|..+|.+.+|.+..+ .+.-+..| .|.|+.+|+++...+... .+|. .+. .++.
T Consensus 219 ntP~LYvGm~~Stf~WH~ED~~L~SINYlH~GapK~WY~VP~~~~~kfE~l~k~~~p~-~~~--------------~c~~ 283 (373)
T 3opt_A 219 NDSYLYAGLWKASFSWHLEDQDLYSINYIHFGAPKQWYSIPQEDRFKFYKFMQEQFPE-EAK--------------NCPE 283 (373)
T ss_dssp -CCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEECCGGGHHHHHHHHHHSSHH-HHS--------------SCSS
T ss_pred chhheeeccccCCcceeecCCcceeEEEeecCCCeEEEEeCHHHHHHHHHHHHHhChh-hhh--------------hCHH
Confidence 3679999999999999997432 33445556 599999999886432110 0000 000 0000
Q ss_pred cc-ccccccCCCCCccccccc-cccCCCccCCCccEEEEEcCCCEEeeC-cCcceeeecCCcchhhhccc
Q 021159 243 RY-VPWCSVNPYPSPETRESE-MAKFPLYFNGPKPFECTVNAGEILYLL-IWFRKAVRNSEVNVVELMQA 309 (316)
Q Consensus 243 ~~-~~~s~vd~~~~~~~~~pd-~~~fP~~~~~~~~~~~~L~pGD~LfiP-gWwH~vv~~~~~~v~~~~~~ 309 (316)
.. .-...+ .|+ +.+ .+.+.+.++++|||.+++= +=+|. +-+.++|+.+..+|
T Consensus 284 fL~h~~~li---------sP~~L~~-----~GIpv~r~vQ~pGEfViTfP~aYH~-gfn~Gfn~aEAvNF 338 (373)
T 3opt_A 284 FLRHKMFLA---------SPKLLQE-----NGIRCNEIVHHEGEFMITYPYGYHA-GFNYGYNLAESVNF 338 (373)
T ss_dssp CTTTSCEEE---------CHHHHHT-----TTCCCEEEEECTTCEEEECTTCCEE-EEESSSEEEEEEEE
T ss_pred HhhCCcccC---------CHHHHHh-----cCCceEEEEECCCCEEEECCCceEE-EEecCccHHHHHcc
Confidence 00 000011 122 222 2388899999999999999 99999 77889888655443
No 21
>2ox0_A JMJC domain-containing histone demethylation PROT; double-stranded beta helix, demethylase, oxygenase, SGC, STR genomics, structural genomics consortium, oxidoreductase; HET: MLY ALY OGA; 1.95A {Homo sapiens} PDB: 2oq7_A* 2os2_A* 2ot7_A* 2oq6_A* 2vd7_A* 2ybk_A* 2ybp_A* 2ybs_A* 3njy_A* 3pdq_A* 3u4s_A* 2p5b_A* 2q8c_A* 2q8d_A* 2q8e_A* 2gp5_A* 2gp3_A* 2wwj_A* 2pxj_A* 2xml_A*
Probab=95.18 E-value=0.028 Score=52.85 Aligned_cols=112 Identities=17% Similarity=0.202 Sum_probs=68.2
Q ss_pred CeeEEEeeCCCCCCCccccCCC--cEEEEEEe-EEEEEEeCCCCCCCCccc---ccCCcccccccccCCcceeeeccCCc
Q 021159 169 EAVNLWIGNQLSETSFHKDHYE--NLYTVVSG-QKHFLLLPPTDVHRMYIR---QYPAAHYSYSRVNDVERFTLELEEPV 242 (316)
Q Consensus 169 ~~~~lwiG~~gs~t~~H~D~~~--n~~~qv~G-~Kr~~L~pP~~~~~ly~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (316)
..++|++|..+|.+.+|.+..+ .+.-+..| .|.|+.+|+++...+-.. .+|. .+.. ...-+.
T Consensus 194 n~P~LYiGm~~S~f~WH~ED~~L~SINYlH~GapK~WY~VP~~~~~kfE~l~~~~~P~-~~~~----~~~~L~------- 261 (381)
T 2ox0_A 194 NTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAKGFFPG-SAQS----CEAFLR------- 261 (381)
T ss_dssp TSCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHHHHHHSHH-HHHH----CTTGGG-------
T ss_pred ccceEEeeccccCcCceecCCcceeeEEeecCCceEEEecCHHHHHHHHHHHHHhChh-hhhc----chHHhh-------
Confidence 4679999999999999997433 33344455 799999999986432210 0000 0000 000000
Q ss_pred ccccccccCCCCCccccccccccCCCccCCCccEEEEEcCCCEEeeC-cCcceeeecCCcchhhhcc
Q 021159 243 RYVPWCSVNPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLL-IWFRKAVRNSEVNVVELMQ 308 (316)
Q Consensus 243 ~~~~~s~vd~~~~~~~~~pd~~~fP~~~~~~~~~~~~L~pGD~LfiP-gWwH~vv~~~~~~v~~~~~ 308 (316)
.. ...+.| . .+.+ .+.+.+.++++|||.+++= +=+|. +-|.++|+.+..+
T Consensus 262 -h~-~~~isP------~--~L~~-----~GIpv~r~vQ~pGEfViTfP~aYH~-gfn~GfN~aEAvN 312 (381)
T 2ox0_A 262 -HK-MTLISP------L--MLKK-----YGIPFDKVTQEAGEFMITFPYGYHA-GFNHGFNCAESTN 312 (381)
T ss_dssp -GS-CEEECH------H--HHHH-----TTCCCEEEEECTTCEEEECTTCEEE-EEECSSEEEEEEE
T ss_pred -cc-ccccCH------H--HHHH-----CCCceEEEEecCCCEEEECCCcEEE-eecCcccHHHHhc
Confidence 00 001111 0 1222 1388899999999999999 99999 7788998865543
No 22
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=93.79 E-value=0.066 Score=52.42 Aligned_cols=36 Identities=14% Similarity=0.082 Sum_probs=25.9
Q ss_pred eeEEEeeCCCCCCCccccCC-CcEEEEEEeEEEEEEeC
Q 021159 170 AVNLWIGNQLSETSFHKDHY-ENLYTVVSGQKHFLLLP 206 (316)
Q Consensus 170 ~~~lwiG~~gs~t~~H~D~~-~n~~~qv~G~Kr~~L~p 206 (316)
...+-|.+. +..++|+.+. +-++.++.|+=++.++.
T Consensus 396 ~a~v~L~pG-gm~~PHwHp~A~Ei~yVl~G~~rv~~V~ 432 (531)
T 3fz3_A 396 AERGFFYRN-GIYSPHWNVNAHSVVYVIRGNARVQVVN 432 (531)
T ss_dssp EEEEEECTT-CEEEEEEESSCCEEEEEEEEEEEEEEEC
T ss_pred EEEEEeecC-ccccceEcCCCCEEEEEEeCcEEEEEEe
Confidence 344555554 6678899875 56889999998887754
No 23
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=93.08 E-value=0.11 Score=50.36 Aligned_cols=67 Identities=15% Similarity=0.144 Sum_probs=47.7
Q ss_pred eeEEEeeCCCCCCCccccCC-CcEEEEEEeEEEEEEeCCCCCCCCcccccCCcccccccccCCcceeeeccCCccccccc
Q 021159 170 AVNLWIGNQLSETSFHKDHY-ENLYTVVSGQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELEEPVRYVPWC 248 (316)
Q Consensus 170 ~~~lwiG~~gs~t~~H~D~~-~n~~~qv~G~Kr~~L~pP~~~~~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 248 (316)
...+-+.+ |+..++|+.+. +-++.++.|+=++.++.+.-
T Consensus 325 ~a~v~L~p-Ggm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g--------------------------------------- 364 (466)
T 3kgl_A 325 ALRGSIRQ-NAMVLPQWNANANAVLYVTDGEAHVQVVNDNG--------------------------------------- 364 (466)
T ss_dssp EEEEEEET-TEEEEEEEESSCCEEEEEEESEEEEEEECTTS---------------------------------------
T ss_pred eEEEEeec-CcEeeeeECCCCCEEEEEEeceEEEEEEeCCC---------------------------------------
Confidence 34455555 47788999865 45788889988887754421
Q ss_pred ccCCCCCccccccccccCCCccCCCccEEEEEcCCCEEeeC-cCcceeeecCCc
Q 021159 249 SVNPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLL-IWFRKAVRNSEV 301 (316)
Q Consensus 249 ~vd~~~~~~~~~pd~~~fP~~~~~~~~~~~~L~pGD~LfiP-gWwH~vv~~~~~ 301 (316)
.+.+..+|++||++||| |+.|. +.+.+.
T Consensus 365 ------------------------~~~f~~~l~~GDV~v~P~G~~H~-~~ag~e 393 (466)
T 3kgl_A 365 ------------------------DRVFDGQVSQGQLLSIPQGFSVV-KRATSE 393 (466)
T ss_dssp ------------------------CEEEEEEEETTCEEEECTTCEEE-EEECSS
T ss_pred ------------------------cEEEEeEecCCcEEEECCCCeEE-EEcCCC
Confidence 12467889999999999 99999 444443
No 24
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=93.01 E-value=0.12 Score=50.31 Aligned_cols=68 Identities=10% Similarity=0.074 Sum_probs=48.9
Q ss_pred eeEEEeeCCCCCCCccccCC-CcEEEEEEeEEEEEEeCCCCCCCCcccccCCcccccccccCCcceeeeccCCccccccc
Q 021159 170 AVNLWIGNQLSETSFHKDHY-ENLYTVVSGQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELEEPVRYVPWC 248 (316)
Q Consensus 170 ~~~lwiG~~gs~t~~H~D~~-~n~~~qv~G~Kr~~L~pP~~~~~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 248 (316)
...+-|.+ |+..++|+.+. +-++.++.|+=++.++.+.-
T Consensus 360 ~a~v~L~p-Ggm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g--------------------------------------- 399 (496)
T 3ksc_A 360 AEHGSLHK-NAMFVPHYNLNANSIIYALKGRARLQVVNCNG--------------------------------------- 399 (496)
T ss_dssp EEEEEEET-TCEEEEEEESSCCEEEEEEESEEEEEEECTTS---------------------------------------
T ss_pred EEEEEeeC-CeEECCeeCCCCCEEEEEEeceEEEEEEeCCC---------------------------------------
Confidence 34455555 47789999865 45788999998888865431
Q ss_pred ccCCCCCccccccccccCCCccCCCccEEEEEcCCCEEeeC-cCcceeeecCCcc
Q 021159 249 SVNPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLL-IWFRKAVRNSEVN 302 (316)
Q Consensus 249 ~vd~~~~~~~~~pd~~~fP~~~~~~~~~~~~L~pGD~LfiP-gWwH~vv~~~~~~ 302 (316)
.+.+..+|++||+++|| |+.|. ..+.+.+
T Consensus 400 ------------------------~~~f~~~l~~GDV~v~P~G~~H~-~~a~~e~ 429 (496)
T 3ksc_A 400 ------------------------NTVFDGELEAGRALTVPQNYAVA-AKSLSDR 429 (496)
T ss_dssp ------------------------CEEEEEEEETTCEEEECTTCEEE-EEECSSE
T ss_pred ------------------------cEEEEEEecCCeEEEECCCCEEE-EEeCCCC
Confidence 12467789999999999 99998 4444433
No 25
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=92.98 E-value=0.11 Score=50.23 Aligned_cols=62 Identities=10% Similarity=0.066 Sum_probs=45.2
Q ss_pred EEEeeCCCCCCCccccCC-CcEEEEEEeEEEEEEeCCCCCCCCcccccCCcccccccccCCcceeeeccCCccccccccc
Q 021159 172 NLWIGNQLSETSFHKDHY-ENLYTVVSGQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELEEPVRYVPWCSV 250 (316)
Q Consensus 172 ~lwiG~~gs~t~~H~D~~-~n~~~qv~G~Kr~~L~pP~~~~~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~v 250 (316)
.+-+. +|+..++|+.+. +-++.++.|+=++.++.+.-
T Consensus 326 ~v~l~-pG~~~~pH~Hp~A~Ei~yV~~G~~~v~vv~~~g----------------------------------------- 363 (459)
T 2e9q_A 326 RGVLY-SNAMVAPHYTVNSHSVMYATRGNARVQVVDNFG----------------------------------------- 363 (459)
T ss_dssp EEEEC-TTCEEEEEEESSCCEEEEEEEEEEEEEEECTTS-----------------------------------------
T ss_pred EEEee-CCcCccceECCCCCEEEEEEeeEEEEEEEeCCC-----------------------------------------
Confidence 34443 457788899864 46788889988887754321
Q ss_pred CCCCCccccccccccCCCccCCCccEEEEEcCCCEEeeC-cCcceeee
Q 021159 251 NPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLL-IWFRKAVR 297 (316)
Q Consensus 251 d~~~~~~~~~pd~~~fP~~~~~~~~~~~~L~pGD~LfiP-gWwH~vv~ 297 (316)
.+.++.+|++||++||| |+.|..++
T Consensus 364 ----------------------~~~~~~~l~~GDv~v~P~G~~H~~~n 389 (459)
T 2e9q_A 364 ----------------------QSVFDGEVREGQVLMIPQNFVVIKRA 389 (459)
T ss_dssp ----------------------CEEEEEEEETTCEEEECTTCEEEEEE
T ss_pred ----------------------CEEEeeEEeCCcEEEECCCCEEEEEe
Confidence 23467789999999999 99999544
No 26
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=92.33 E-value=0.17 Score=49.11 Aligned_cols=24 Identities=17% Similarity=0.315 Sum_probs=20.3
Q ss_pred ccEEEEEcCCCEEeeC-cCcceeee
Q 021159 274 KPFECTVNAGEILYLL-IWFRKAVR 297 (316)
Q Consensus 274 ~~~~~~L~pGD~LfiP-gWwH~vv~ 297 (316)
+.++.+|+|||++||| |+.|.+.+
T Consensus 381 ~~~~~~l~~GDv~viP~G~~H~~~n 405 (476)
T 1fxz_A 381 RVFDGELQEGRVLIVPQNFVVAARS 405 (476)
T ss_dssp EEEEEEEETTCEEEECTTCEEEEEE
T ss_pred EEeeeEEcCCCEEEECCCCeEEEEe
Confidence 3467789999999999 99999554
No 27
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=92.09 E-value=0.18 Score=49.31 Aligned_cols=23 Identities=9% Similarity=0.184 Sum_probs=19.8
Q ss_pred cEEEEEcCCCEEeeC-cCcceeee
Q 021159 275 PFECTVNAGEILYLL-IWFRKAVR 297 (316)
Q Consensus 275 ~~~~~L~pGD~LfiP-gWwH~vv~ 297 (316)
.++.+|++||++||| |+.|.+++
T Consensus 416 ~~~~~l~~GDv~viP~G~~H~~~N 439 (510)
T 3c3v_A 416 VYDEELQEGHVLVVPQNFAVAGKS 439 (510)
T ss_dssp EEEEEEETTCEEEECTTCEEEEEE
T ss_pred EEeEEEcCCcEEEECCCCeEEEEe
Confidence 467789999999999 99999554
No 28
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=91.52 E-value=0.22 Score=48.07 Aligned_cols=35 Identities=11% Similarity=0.077 Sum_probs=24.7
Q ss_pred EEEeeCCCCCCCccccCC-CcEEEEEEeEEEEEEeCC
Q 021159 172 NLWIGNQLSETSFHKDHY-ENLYTVVSGQKHFLLLPP 207 (316)
Q Consensus 172 ~lwiG~~gs~t~~H~D~~-~n~~~qv~G~Kr~~L~pP 207 (316)
.+-+. +|+..++|+.+. +-++.++.|+=++.++.+
T Consensus 327 ~v~l~-pGgm~~PHwHp~A~Ei~yV~~G~~~v~vV~~ 362 (465)
T 3qac_A 327 KGVLY-RNAMMAPHYNLNAHNIMYCVRGRGRIQIVND 362 (465)
T ss_dssp EEEEC-TTCEEEEEEESSCCEEEEEEEEEEEEEEECT
T ss_pred EEEec-CCcEeeeEECCCCCEEEEEEeCCEEEEEEeC
Confidence 33444 457788999865 457788899988888654
No 29
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=91.18 E-value=0.64 Score=38.87 Aligned_cols=25 Identities=8% Similarity=-0.206 Sum_probs=21.4
Q ss_pred CccEEEEEcCCCEEeeC-cCcceeee
Q 021159 273 PKPFECTVNAGEILYLL-IWFRKAVR 297 (316)
Q Consensus 273 ~~~~~~~L~pGD~LfiP-gWwH~vv~ 297 (316)
...-+++|+|||.+.|| +-||....
T Consensus 116 ~a~~~i~L~pGesvtIppg~~H~f~a 141 (175)
T 2y0o_A 116 TVWHEIELEPGGQYTIPPNTKHWFQA 141 (175)
T ss_dssp CCCEEEEECTTCEEEECTTCCEEEEE
T ss_pred cCCcEEEECCCCEEEECCCCcEEEEe
Confidence 44678999999999999 99999443
No 30
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=90.82 E-value=0.27 Score=47.92 Aligned_cols=33 Identities=12% Similarity=0.023 Sum_probs=23.3
Q ss_pred EEEeeCCCCCCCccccC-CCcEEEEEEeEEEEEEe
Q 021159 172 NLWIGNQLSETSFHKDH-YENLYTVVSGQKHFLLL 205 (316)
Q Consensus 172 ~lwiG~~gs~t~~H~D~-~~n~~~qv~G~Kr~~L~ 205 (316)
.+-+.+ |+..++|+.+ .+-++.++.|+=++.+.
T Consensus 371 ~v~l~p-G~~~~pH~Hp~a~Ei~yVl~G~~~v~v~ 404 (493)
T 2d5f_A 371 YVVLYR-NGIYSPHWNLNANSVIYVTRGKGRVRVV 404 (493)
T ss_dssp EEEECT-TCEEEEEEESSCCEEEEEEEEEEEEEEE
T ss_pred EEEccC-CceeeeeECCCCCEEEEEEeceEEEEEE
Confidence 334444 5678999987 45678899998777663
No 31
>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp}
Probab=90.62 E-value=0.64 Score=38.83 Aligned_cols=36 Identities=14% Similarity=0.188 Sum_probs=25.8
Q ss_pred eeEEEeeCCCCCCCccccCC-CcEEEEEEeEEEEEEe
Q 021159 170 AVNLWIGNQLSETSFHKDHY-ENLYTVVSGQKHFLLL 205 (316)
Q Consensus 170 ~~~lwiG~~gs~t~~H~D~~-~n~~~qv~G~Kr~~L~ 205 (316)
..++..+.+|+.-.+|+... .=++..++|+=..+++
T Consensus 54 Q~n~s~s~~GvlRG~H~h~~q~klv~~v~G~v~dv~v 90 (174)
T 3ejk_A 54 EIYFSEVLPRRVKAWKRHSLMTQLFAVPVGCIHVVLY 90 (174)
T ss_dssp EEEEEEECBTCEEEEEEESSCCEEEEEEESEEEEEEE
T ss_pred EEEEEECCCCCEECcEecCCCceEEEEEeeEEEEEEE
Confidence 55666778899999999753 3456777887766663
No 32
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=90.12 E-value=0.97 Score=37.63 Aligned_cols=75 Identities=17% Similarity=0.187 Sum_probs=55.3
Q ss_pred CeeEEEeeCCCCCCCccccCCCcEEEEEEeEEEEEEeCCCCCCCCcccccCCcccccccccCCcceeeeccCCccccccc
Q 021159 169 EAVNLWIGNQLSETSFHKDHYENLYTVVSGQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELEEPVRYVPWC 248 (316)
Q Consensus 169 ~~~~lwiG~~gs~t~~H~D~~~n~~~qv~G~Kr~~L~pP~~~~~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 248 (316)
...-+++|.+++.+.+|+|+.+-++.|+.|.=.+.+....
T Consensus 34 ~~~V~~vgGPn~r~D~H~~~~eE~Fy~lkG~m~l~v~d~g---------------------------------------- 73 (176)
T 1zvf_A 34 GFTVMIVGGPNERTDYHINPTPEWFYQKKGSMLLKVVDET---------------------------------------- 73 (176)
T ss_dssp SEEEEEECSSBCCSCEEECSSCEEEEEEESCEEEEEEECS----------------------------------------
T ss_pred CEEEEEEcCCCcCCcCcCCCCceEEEEEeCEEEEEEEcCC----------------------------------------
Confidence 4567788999899999999999999999997655442100
Q ss_pred ccCCCCCccccccccccCCCccCCCccEEEEEcCCCEEeeC-cCcceeeecCCcchhh
Q 021159 249 SVNPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLL-IWFRKAVRNSEVNVVE 305 (316)
Q Consensus 249 ~vd~~~~~~~~~pd~~~fP~~~~~~~~~~~~L~pGD~LfiP-gWwH~vv~~~~~~v~~ 305 (316)
+ + +....++.|++||+..+| +=-|.-++. ..++..
T Consensus 74 -------------~----~----~~~~~dv~i~eGdmfllP~gvpHsP~r~-~e~v~l 109 (176)
T 1zvf_A 74 -------------D----A----EPKFIDIIINEGDSYLLPGNVPHSPVRF-ADTVGI 109 (176)
T ss_dssp -------------S----S----SCEEEEEEECTTEEEEECTTCCEEEEEC-TTCEEE
T ss_pred -------------C----c----ccceeeEEECCCCEEEcCCCCCcCCccc-CCcEEE
Confidence 0 0 012468999999999999 999996564 455443
No 33
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=89.91 E-value=0.26 Score=46.13 Aligned_cols=25 Identities=16% Similarity=0.171 Sum_probs=21.1
Q ss_pred ccEEEEEcCCCEEeeC-cCcceeeecC
Q 021159 274 KPFECTVNAGEILYLL-IWFRKAVRNS 299 (316)
Q Consensus 274 ~~~~~~L~pGD~LfiP-gWwH~vv~~~ 299 (316)
..-++.+++||++++| +.||. ..|.
T Consensus 140 dG~~~~~~~GD~v~iP~g~~H~-~~N~ 165 (368)
T 3nw4_A 140 NGDPVRMSRGDLLLTPGWCFHG-HMND 165 (368)
T ss_dssp TTEEEEEETTCEEEECTTCCEE-EEEC
T ss_pred CCEEEEEeCCCEEEECCCCcEE-eEeC
Confidence 3468899999999999 99999 5554
No 34
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=89.05 E-value=1.3 Score=36.86 Aligned_cols=35 Identities=17% Similarity=0.346 Sum_probs=29.4
Q ss_pred CeeEEEeeCCCCCCCccccCCCcEEEEEEeEEEEE
Q 021159 169 EAVNLWIGNQLSETSFHKDHYENLYTVVSGQKHFL 203 (316)
Q Consensus 169 ~~~~lwiG~~gs~t~~H~D~~~n~~~qv~G~Kr~~ 203 (316)
...-+++|.+++.+.+|+++.+=++.|+.|.=++.
T Consensus 35 ~~~V~~v~Gpn~r~d~H~h~~dE~FyvlkG~m~i~ 69 (174)
T 1yfu_A 35 DFIVTVVGGPNHRTDYHDDPLEEFFYQLRGNAYLN 69 (174)
T ss_dssp SEEEEEECSCBCCCCEEECSSCEEEEEEESCEEEE
T ss_pred cEEEEEEcCCCcCccCcCCCCceEEEEEeeEEEEE
Confidence 45667899999999999999999999999975443
No 35
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=88.98 E-value=1.2 Score=42.11 Aligned_cols=23 Identities=4% Similarity=-0.013 Sum_probs=19.7
Q ss_pred cEEEEEcCCCEEeeC-cCcceeee
Q 021159 275 PFECTVNAGEILYLL-IWFRKAVR 297 (316)
Q Consensus 275 ~~~~~L~pGD~LfiP-gWwH~vv~ 297 (316)
.-++.++|||++|+| +.||+..+
T Consensus 331 ge~~~~~~GD~~~iP~g~~H~~~N 354 (394)
T 3bu7_A 331 GKRFDWSEHDIFCVPAWTWHEHCN 354 (394)
T ss_dssp TEEEEECTTCEEEECTTCCEEEEE
T ss_pred CEEEEEeCCCEEEECCCCeEEeEe
Confidence 467899999999999 99999443
No 36
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=88.92 E-value=0.94 Score=35.16 Aligned_cols=22 Identities=14% Similarity=0.045 Sum_probs=18.4
Q ss_pred EEEEEcCCCEEeeC-cCcceeee
Q 021159 276 FECTVNAGEILYLL-IWFRKAVR 297 (316)
Q Consensus 276 ~~~~L~pGD~LfiP-gWwH~vv~ 297 (316)
-+.+|+|||+++|| +-.|...+
T Consensus 83 ~~~~l~~Gd~~~ip~g~~H~~~~ 105 (134)
T 2o8q_A 83 GAVMLEAGGSAFQPPGVRHRELR 105 (134)
T ss_dssp EEEEEETTCEEECCTTCCEEEEE
T ss_pred EEEEecCCCEEEECCCCcEEeEe
Confidence 35689999999999 99999444
No 37
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=88.48 E-value=0.26 Score=41.14 Aligned_cols=23 Identities=9% Similarity=-0.060 Sum_probs=19.3
Q ss_pred EEEEEcCCCEEeeC-cCcceeeecC
Q 021159 276 FECTVNAGEILYLL-IWFRKAVRNS 299 (316)
Q Consensus 276 ~~~~L~pGD~LfiP-gWwH~vv~~~ 299 (316)
.+.+|++||++||| |..|. ..|.
T Consensus 83 ~~~~l~~GDv~~~P~g~~H~-~~N~ 106 (178)
T 1dgw_A 83 DTYKLDQGDAIKIQAGTPFY-LINP 106 (178)
T ss_dssp EEEEEETTEEEEECTTCCEE-EEEC
T ss_pred EEEEECCCCEEEECCCCeEE-EEeC
Confidence 35689999999999 99999 5443
No 38
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=88.44 E-value=1.1 Score=32.87 Aligned_cols=24 Identities=13% Similarity=-0.079 Sum_probs=20.1
Q ss_pred EEEEEcCCCEEeeC-cCcceeeecCC
Q 021159 276 FECTVNAGEILYLL-IWFRKAVRNSE 300 (316)
Q Consensus 276 ~~~~L~pGD~LfiP-gWwH~vv~~~~ 300 (316)
-+.+|.|||++++| +-.|. +.|..
T Consensus 59 ~~~~l~~Gd~~~~p~~~~H~-~~N~g 83 (97)
T 2fqp_A 59 VTSQLTRGVSYTRPEGVEHN-VINPS 83 (97)
T ss_dssp EEEEECTTCCEEECTTCEEE-EECCS
T ss_pred EEEEEcCCCEEEeCCCCccc-CEeCC
Confidence 46789999999999 99999 55543
No 39
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=88.37 E-value=2.4 Score=34.17 Aligned_cols=29 Identities=24% Similarity=0.454 Sum_probs=22.0
Q ss_pred eCCCCCCCccccCCCcEEEEEEeEEEEEE
Q 021159 176 GNQLSETSFHKDHYENLYTVVSGQKHFLL 204 (316)
Q Consensus 176 G~~gs~t~~H~D~~~n~~~qv~G~Kr~~L 204 (316)
-.+|..++.|+....-++.++.|+=++.+
T Consensus 48 ~~pg~~~~~H~H~~~E~~~Vl~G~~~~~~ 76 (163)
T 1lr5_A 48 ISPGQRTPIHRHSCEEVFTVLKGKGTLLM 76 (163)
T ss_dssp ECTTCBCCEEEESSCEEEEEEECCEEEEE
T ss_pred ECCCCcCCCeECCCCeEEEEEeCEEEEEE
Confidence 34566788898877678889999877665
No 40
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=88.26 E-value=1.3 Score=33.73 Aligned_cols=22 Identities=23% Similarity=0.111 Sum_probs=18.8
Q ss_pred EEEEcCCCEEeeC-cCcceeeecC
Q 021159 277 ECTVNAGEILYLL-IWFRKAVRNS 299 (316)
Q Consensus 277 ~~~L~pGD~LfiP-gWwH~vv~~~ 299 (316)
+..|+|||+++|| +-+|. ..+.
T Consensus 80 ~~~l~~Gd~~~i~~~~~H~-~~n~ 102 (125)
T 3h8u_A 80 VTHLKAGDIAIAKPGQVHG-AMNS 102 (125)
T ss_dssp EEEEETTEEEEECTTCCCE-EEEC
T ss_pred EEEeCCCCEEEECCCCEEE-eEeC
Confidence 5689999999999 99999 5554
No 41
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=88.14 E-value=0.1 Score=39.18 Aligned_cols=34 Identities=18% Similarity=0.045 Sum_probs=23.9
Q ss_pred EEEEEcCCCEEeeC-cCcceeeecCCcc--hhhhcccC
Q 021159 276 FECTVNAGEILYLL-IWFRKAVRNSEVN--VVELMQAK 310 (316)
Q Consensus 276 ~~~~L~pGD~LfiP-gWwH~vv~~~~~~--v~~~~~~~ 310 (316)
.+..|.+||.+||| |-||. +.|.... +++.+++|
T Consensus 59 ~~~~l~~G~~~~ip~G~~H~-~~N~g~~pl~~IeVE~K 95 (98)
T 3lag_A 59 SLAQLKTGRSYARKAGVQHD-VRNESTAEIVFLEIELK 95 (98)
T ss_dssp ECCCBCTTCCEEECTTCEEE-EBCCSSSCEEEEEEEEC
T ss_pred EEEEecCCcEEEEcCCCcEE-CEECCCCeEEEEEEEEc
Confidence 45678999999999 99999 5555322 34555544
No 42
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=88.13 E-value=0.42 Score=45.48 Aligned_cols=76 Identities=7% Similarity=0.043 Sum_probs=49.4
Q ss_pred EEEeeCCCCCCCccccCC-CcEEEEEEeEEEEEEeCCCCCCCCcccccCCcccccccccCCcceeeeccCCccccccccc
Q 021159 172 NLWIGNQLSETSFHKDHY-ENLYTVVSGQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELEEPVRYVPWCSV 250 (316)
Q Consensus 172 ~lwiG~~gs~t~~H~D~~-~n~~~qv~G~Kr~~L~pP~~~~~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~v 250 (316)
.+-+.+ |+...+|+.+. +-++.+++|+=++.++.|..... +..
T Consensus 253 ~~~l~~-g~~~~pH~h~~A~Ei~~V~~G~~~v~~v~~~g~~~-----------------~~~------------------ 296 (416)
T 1uij_A 253 SVDINE-GALLLPHFNSKAIVILVINEGDANIELVGIKEQQQ-----------------KQK------------------ 296 (416)
T ss_dssp EEEECT-TEEEEEEEESSCEEEEEEEESEEEEEEEEEC------------------------------------------
T ss_pred EEEEcC-CcEecceEcCCCcEEEEEEeeEEEEEEEcCCCccc-----------------ccc------------------
Confidence 334444 57899999874 45789999999999987743210 000
Q ss_pred CCCCCccccccccccCCCccCCCccEEEEEcCCCEEeeC-cCcceeeec
Q 021159 251 NPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLL-IWFRKAVRN 298 (316)
Q Consensus 251 d~~~~~~~~~pd~~~fP~~~~~~~~~~~~L~pGD~LfiP-gWwH~vv~~ 298 (316)
+. +. .+.++.+..+|++||+++|| |+.|..++.
T Consensus 297 --------~~---~~----~~~~~~~~~~l~~Gdv~vvP~g~~h~~~n~ 330 (416)
T 1uij_A 297 --------QE---EE----PLEVQRYRAELSEDDVFVIPAAYPFVVNAT 330 (416)
T ss_dssp --------------------CCEEEEEEEEETTCEEEECTTCCEEEEES
T ss_pred --------cc---cc----ccceEEEEEEecCCcEEEECCCCeEEEEcC
Confidence 00 00 01035678899999999999 999995555
No 43
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=87.86 E-value=0.36 Score=45.74 Aligned_cols=27 Identities=4% Similarity=0.134 Sum_probs=22.6
Q ss_pred CccEEEEEcCCCEEeeC-cCcceeeecC
Q 021159 273 PKPFECTVNAGEILYLL-IWFRKAVRNS 299 (316)
Q Consensus 273 ~~~~~~~L~pGD~LfiP-gWwH~vv~~~ 299 (316)
.+.+..+|++||+++|| |+.|..++..
T Consensus 287 ~~~~~~~l~~GDV~vvP~G~~h~~~n~~ 314 (397)
T 2phl_A 287 YESYRAELSKDDVFVIPAAYPVAIKATS 314 (397)
T ss_dssp EEEEEEEEETTCEEEECTTCCEEEEESS
T ss_pred ceEEEEEecCCCEEEECCCCeEEEEeCC
Confidence 35689999999999999 9999955543
No 44
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=87.73 E-value=0.85 Score=41.96 Aligned_cols=23 Identities=17% Similarity=0.317 Sum_probs=19.1
Q ss_pred EEEEEcCCCEEeeC-cCcceeeecC
Q 021159 276 FECTVNAGEILYLL-IWFRKAVRNS 299 (316)
Q Consensus 276 ~~~~L~pGD~LfiP-gWwH~vv~~~ 299 (316)
....|++||++||| +.+|. ..+.
T Consensus 96 ~~~~l~~GD~~~ip~g~~H~-~~n~ 119 (361)
T 2vqa_A 96 EIADVDKGGLWYFPRGWGHS-IEGI 119 (361)
T ss_dssp EEEEEETTEEEEECTTCEEE-EEEC
T ss_pred EEEEEcCCCEEEECCCCeEE-EEeC
Confidence 34689999999999 99999 5444
No 45
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=87.72 E-value=1 Score=42.50 Aligned_cols=23 Identities=4% Similarity=-0.028 Sum_probs=20.1
Q ss_pred cEEEEEcCCCEEeeC-cCcceeeec
Q 021159 275 PFECTVNAGEILYLL-IWFRKAVRN 298 (316)
Q Consensus 275 ~~~~~L~pGD~LfiP-gWwH~vv~~ 298 (316)
.-++.+++||++++| |.||. ..|
T Consensus 161 G~~~~~~~GD~i~~P~g~~H~-~~N 184 (394)
T 3bu7_A 161 GHKVELGANDFVLTPNGTWHE-HGI 184 (394)
T ss_dssp TEEEEECTTCEEEECTTCCEE-EEE
T ss_pred CEEEEEcCCCEEEECcCCCEE-EEc
Confidence 357889999999999 99999 666
No 46
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=87.52 E-value=2.6 Score=31.47 Aligned_cols=26 Identities=4% Similarity=-0.019 Sum_probs=20.4
Q ss_pred EEEEEcCCCEEeeC-cCcceeeecCCcc
Q 021159 276 FECTVNAGEILYLL-IWFRKAVRNSEVN 302 (316)
Q Consensus 276 ~~~~L~pGD~LfiP-gWwH~vv~~~~~~ 302 (316)
-+..|+|||+++|| +=.|. ..+.+..
T Consensus 76 ~~~~l~~Gd~i~i~~~~~H~-~~~~~~~ 102 (114)
T 2ozj_A 76 QKIDLVPEDVLMVPAHKIHA-IAGKGRF 102 (114)
T ss_dssp EEEEECTTCEEEECTTCCBE-EEEEEEE
T ss_pred EEEEecCCCEEEECCCCcEE-EEeCCCc
Confidence 35689999999999 99999 5554433
No 47
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=87.23 E-value=1.5 Score=40.63 Aligned_cols=25 Identities=8% Similarity=-0.013 Sum_probs=20.1
Q ss_pred EEEEEcCCCEEeeC-cCcceeeecCCc
Q 021159 276 FECTVNAGEILYLL-IWFRKAVRNSEV 301 (316)
Q Consensus 276 ~~~~L~pGD~LfiP-gWwH~vv~~~~~ 301 (316)
-++.+++||++||| +.||+ +.|.+.
T Consensus 306 ~~~~~~~GD~~~vP~~~~H~-~~n~e~ 331 (354)
T 2d40_A 306 ETFSFSAKDIFVVPTWHGVS-FQTTQD 331 (354)
T ss_dssp EEEEEETTCEEEECTTCCEE-EEEEEE
T ss_pred EEEEEcCCCEEEECCCCeEE-EEeCCC
Confidence 56789999999999 88999 545443
No 48
>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A*
Probab=87.21 E-value=0.8 Score=39.02 Aligned_cols=31 Identities=6% Similarity=0.055 Sum_probs=23.9
Q ss_pred ccEEEEEcCCCEEeeC-cCcceeeecCCcchh
Q 021159 274 KPFECTVNAGEILYLL-IWFRKAVRNSEVNVV 304 (316)
Q Consensus 274 ~~~~~~L~pGD~LfiP-gWwH~vv~~~~~~v~ 304 (316)
+...++|.++-.|||| |.||-.....+.+++
T Consensus 107 ~~~~v~Ls~~~~L~IP~G~aHgf~~lsd~a~~ 138 (197)
T 1nxm_A 107 NTYQTVIDASKSIFVPRGVANGFQVLSDFVAY 138 (197)
T ss_dssp CEEEEEECTTEEEEECTTEEEEEEECSSEEEE
T ss_pred eEEEEEeCCCcEEEeCCCeEEEEEeccCCeEE
Confidence 3578889999999999 999995555554443
No 49
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=86.92 E-value=3.2 Score=33.90 Aligned_cols=22 Identities=5% Similarity=0.169 Sum_probs=18.7
Q ss_pred EEEEcCCCEEeeC-cCcceeeecC
Q 021159 277 ECTVNAGEILYLL-IWFRKAVRNS 299 (316)
Q Consensus 277 ~~~L~pGD~LfiP-gWwH~vv~~~ 299 (316)
+.+|+|||++||| +-+|. ..+.
T Consensus 95 ~~~l~~Gd~i~ip~~~~H~-~~n~ 117 (167)
T 3ibm_A 95 VEPLTPLDCVYIAPHAWHQ-IHAT 117 (167)
T ss_dssp EEEECTTCEEEECTTCCEE-EEEE
T ss_pred EEEECCCCEEEECCCCcEE-EEeC
Confidence 5789999999999 99999 5443
No 50
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=86.40 E-value=1.7 Score=33.09 Aligned_cols=24 Identities=13% Similarity=-0.015 Sum_probs=19.6
Q ss_pred EEEEcCCCEEeeC-cCcceeeecCCc
Q 021159 277 ECTVNAGEILYLL-IWFRKAVRNSEV 301 (316)
Q Consensus 277 ~~~L~pGD~LfiP-gWwH~vv~~~~~ 301 (316)
+.+|+|||+++|| +=.|. ..+.+.
T Consensus 80 ~~~l~~Gd~~~ip~~~~H~-~~~~~~ 104 (126)
T 4e2g_A 80 TRVLRPGMAYTIPGGVRHR-ARTFED 104 (126)
T ss_dssp EEEECTTEEEEECTTCCEE-EECCTT
T ss_pred EEEeCCCCEEEECCCCcEE-eEECCC
Confidence 4689999999999 99999 555443
No 51
>3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str}
Probab=86.29 E-value=1.9 Score=36.94 Aligned_cols=31 Identities=16% Similarity=0.135 Sum_probs=23.1
Q ss_pred CeeEEEee-CCCCCCCccccC----CCcEEEEEEeE
Q 021159 169 EAVNLWIG-NQLSETSFHKDH----YENLYTVVSGQ 199 (316)
Q Consensus 169 ~~~~lwiG-~~gs~t~~H~D~----~~n~~~qv~G~ 199 (316)
...+.-.+ .+|+.-.+|+.. ..=++..++|+
T Consensus 69 ~Q~n~S~S~~~GvlRGlH~q~~p~~q~KlV~vv~G~ 104 (205)
T 3ryk_A 69 VQDNVSYSAEAGTIRGLHFQKNPKAQTKLIQVMQGA 104 (205)
T ss_dssp CEEEEEEESSTTBEEEEEEECTTSCCCEEEEEEESE
T ss_pred eEEEEEEeCCCCcEeEeEecCCCCCceEEEEEeCCe
Confidence 45677777 689999999974 33467788887
No 52
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=86.22 E-value=2.2 Score=34.55 Aligned_cols=22 Identities=14% Similarity=0.454 Sum_probs=18.9
Q ss_pred EEEEcCCCEEeeC-cCcceeeecC
Q 021159 277 ECTVNAGEILYLL-IWFRKAVRNS 299 (316)
Q Consensus 277 ~~~L~pGD~LfiP-gWwH~vv~~~ 299 (316)
+.+|+|||++||| +-+|. ..+.
T Consensus 83 ~~~l~~Gd~i~ip~~~~H~-~~n~ 105 (156)
T 3kgz_A 83 ISDVAQGDLVFIPPMTWHQ-FRAN 105 (156)
T ss_dssp EEEEETTCEEEECTTCCEE-EECC
T ss_pred EEEeCCCCEEEECCCCcEE-eEeC
Confidence 5689999999999 99999 5554
No 53
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=86.16 E-value=2 Score=32.09 Aligned_cols=24 Identities=13% Similarity=0.068 Sum_probs=19.6
Q ss_pred EEEEcCCCEEeeC-cCcceeeecCCc
Q 021159 277 ECTVNAGEILYLL-IWFRKAVRNSEV 301 (316)
Q Consensus 277 ~~~L~pGD~LfiP-gWwH~vv~~~~~ 301 (316)
+..|.|||+++|| +=.|. ..+.+.
T Consensus 79 ~~~l~~Gd~~~ip~~~~H~-~~~~~~ 103 (115)
T 1yhf_A 79 TYRVAEGQTIVMPAGIPHA-LYAVEA 103 (115)
T ss_dssp EEEEETTCEEEECTTSCEE-EEESSC
T ss_pred EEEECCCCEEEECCCCCEE-EEECCC
Confidence 4689999999999 99999 555443
No 54
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=86.01 E-value=0.53 Score=39.63 Aligned_cols=24 Identities=17% Similarity=0.426 Sum_probs=20.3
Q ss_pred cEEEEEcCCCEEeeC-cCcceeeec
Q 021159 275 PFECTVNAGEILYLL-IWFRKAVRN 298 (316)
Q Consensus 275 ~~~~~L~pGD~LfiP-gWwH~vv~~ 298 (316)
.....|+|||+++|| +.+|...+.
T Consensus 118 ~~~~~l~~GD~v~ip~g~~H~~~N~ 142 (190)
T 1x82_A 118 AKWISMEPGTVVYVPPYWAHRTVNI 142 (190)
T ss_dssp EEEEEECTTCEEEECTTCEEEEEEC
T ss_pred EEEEEECCCcEEEECCCCeEEEEEC
Confidence 467899999999999 999994443
No 55
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=85.64 E-value=0.32 Score=36.70 Aligned_cols=23 Identities=9% Similarity=0.111 Sum_probs=19.3
Q ss_pred EEEEcCCCEEeeC-cCcceeeecCC
Q 021159 277 ECTVNAGEILYLL-IWFRKAVRNSE 300 (316)
Q Consensus 277 ~~~L~pGD~LfiP-gWwH~vv~~~~ 300 (316)
+.+|+|||+++|| +..|. ..+.+
T Consensus 69 ~~~l~~GD~i~ip~g~~H~-~~n~~ 92 (101)
T 1o5u_A 69 KYVIEKGDLVTFPKGLRCR-WKVLE 92 (101)
T ss_dssp EEEEETTCEEEECTTCEEE-EEEEE
T ss_pred EEEECCCCEEEECCCCcEE-EEeCC
Confidence 5789999999999 99999 55543
No 56
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=85.57 E-value=2.9 Score=31.41 Aligned_cols=21 Identities=19% Similarity=0.252 Sum_probs=17.9
Q ss_pred EEcCCCEEeeC-cCcceeeecCC
Q 021159 279 TVNAGEILYLL-IWFRKAVRNSE 300 (316)
Q Consensus 279 ~L~pGD~LfiP-gWwH~vv~~~~ 300 (316)
.|+|||+++|| +-.|. ..+.+
T Consensus 69 ~l~~Gd~i~ip~~~~H~-~~~~~ 90 (117)
T 2b8m_A 69 NYKEGNIVYVPFNVKML-IQNIN 90 (117)
T ss_dssp EEETTCEEEECTTCEEE-EECCS
T ss_pred EeCCCCEEEECCCCcEE-eEcCC
Confidence 78999999999 99999 55543
No 57
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=85.48 E-value=1.3 Score=40.64 Aligned_cols=23 Identities=22% Similarity=0.309 Sum_probs=19.8
Q ss_pred EEEEEcCCCEEeeC-cCcceeeecC
Q 021159 276 FECTVNAGEILYLL-IWFRKAVRNS 299 (316)
Q Consensus 276 ~~~~L~pGD~LfiP-gWwH~vv~~~ 299 (316)
.+.+|++||+++|| +.+|. ..+.
T Consensus 278 ~~~~l~~GD~~~ip~~~~H~-~~n~ 301 (361)
T 2vqa_A 278 SVSRLQQGDVGYVPKGYGHA-IRNS 301 (361)
T ss_dssp EEEEECTTCEEEECTTCEEE-EECC
T ss_pred EEEEECCCCEEEECCCCeEE-eEEC
Confidence 57899999999999 99999 5553
No 58
>1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} SCOP: b.82.1.1 PDB: 1ofn_A* 1wa4_A
Probab=85.43 E-value=2.5 Score=36.11 Aligned_cols=31 Identities=6% Similarity=-0.033 Sum_probs=22.5
Q ss_pred CeeEEEeeCCCCCCCccccCC----CcEEEEEEeE
Q 021159 169 EAVNLWIGNQLSETSFHKDHY----ENLYTVVSGQ 199 (316)
Q Consensus 169 ~~~~lwiG~~gs~t~~H~D~~----~n~~~qv~G~ 199 (316)
...+.-.+.+|+.-.+|+... .=++..++|+
T Consensus 47 ~Q~n~S~s~~GvlRGlH~q~~p~~q~Klv~vv~G~ 81 (205)
T 1oi6_A 47 AQTIHSMSKRGVVRGIHYTVTPPGTAKYVYCARGK 81 (205)
T ss_dssp CEEEEEEECTTBEEEEEEECTTTCCCEEEEEEESC
T ss_pred EEEEEEeCCCCeEeeeeccCCCCCCceEEEEeCCE
Confidence 356777778899999999842 3456677776
No 59
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=85.38 E-value=1.8 Score=37.24 Aligned_cols=34 Identities=12% Similarity=0.165 Sum_probs=24.8
Q ss_pred eEEEeeCCCCCCCccccCCCcEEEEEEeEEEEEE
Q 021159 171 VNLWIGNQLSETSFHKDHYENLYTVVSGQKHFLL 204 (316)
Q Consensus 171 ~~lwiG~~gs~t~~H~D~~~n~~~qv~G~Kr~~L 204 (316)
..++-=.+|+..+.|..+.+-++.++.|+=++++
T Consensus 39 ~~~~~~~~G~~~~~h~h~~~~~~~Vl~G~~~~~i 72 (227)
T 3rns_A 39 ISLFSLAKDEEITAEAMLGNRYYYCFNGNGEIFI 72 (227)
T ss_dssp EEEEEECTTCEEEECSCSSCEEEEEEESEEEEEE
T ss_pred EEEEEECCCCccCccccCCCEEEEEEeCEEEEEE
Confidence 3444445678888898888888888999876654
No 60
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=85.27 E-value=1.2 Score=41.31 Aligned_cols=32 Identities=9% Similarity=0.108 Sum_probs=22.7
Q ss_pred EEEeeCCCCCCCccccCCCcEEEEEEeEEEEEE
Q 021159 172 NLWIGNQLSETSFHKDHYENLYTVVSGQKHFLL 204 (316)
Q Consensus 172 ~lwiG~~gs~t~~H~D~~~n~~~qv~G~Kr~~L 204 (316)
.+.+.+ |...++|+.+..-++.++.|+=++++
T Consensus 83 ~~~l~p-g~~~~~H~H~~~E~~~Vl~G~~~~~~ 114 (385)
T 1j58_A 83 NMRLKP-GAIRELHWHKEAEWAYMIYGSARVTI 114 (385)
T ss_dssp EEEECT-TCEEEEEEESSCEEEEEEEEEEEEEE
T ss_pred EEEECC-CCCCCCccCChheEEEEEeeeEEEEE
Confidence 334444 45778898877778888999876665
No 61
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=85.06 E-value=2.3 Score=39.75 Aligned_cols=27 Identities=4% Similarity=-0.047 Sum_probs=21.5
Q ss_pred EEEEEcCCCEEeeC-cCcceeeecCCcch
Q 021159 276 FECTVNAGEILYLL-IWFRKAVRNSEVNV 303 (316)
Q Consensus 276 ~~~~L~pGD~LfiP-gWwH~vv~~~~~~v 303 (316)
.++..++||+++|| +.||+ ..+.+..+
T Consensus 317 ~~~~w~~gD~fvvP~w~~h~-~~n~~~a~ 344 (368)
T 3nw4_A 317 ETTKLEKGDMFVVPSWVPWS-LQAETQFD 344 (368)
T ss_dssp EEEEECTTCEEEECTTCCEE-EEESSSEE
T ss_pred EEEEecCCCEEEECCCCcEE-EEeCCCEE
Confidence 56889999999999 99999 55555443
No 62
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=83.90 E-value=0.81 Score=43.53 Aligned_cols=23 Identities=9% Similarity=-0.112 Sum_probs=18.9
Q ss_pred EEEEEcCCCEEeeC-cCcceeeec
Q 021159 276 FECTVNAGEILYLL-IWFRKAVRN 298 (316)
Q Consensus 276 ~~~~L~pGD~LfiP-gWwH~vv~~ 298 (316)
.+..|++||+++|| |..|.+.+.
T Consensus 91 ~~~~l~~GDv~~iP~G~~H~~~N~ 114 (416)
T 1uij_A 91 DSYNLHPGDAQRIPAGTTYYLVNP 114 (416)
T ss_dssp EEEEECTTEEEEECTTCEEEEEEC
T ss_pred eEEEecCCCEEEECCCCeEEEEec
Confidence 34689999999999 999994444
No 63
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=83.47 E-value=0.69 Score=35.84 Aligned_cols=23 Identities=26% Similarity=0.280 Sum_probs=19.7
Q ss_pred EEEEEcCCCEEeeC-cCcceeeecC
Q 021159 276 FECTVNAGEILYLL-IWFRKAVRNS 299 (316)
Q Consensus 276 ~~~~L~pGD~LfiP-gWwH~vv~~~ 299 (316)
-+.+|+|||++||| +-.|. .++.
T Consensus 77 ~~~~l~~GD~v~ip~g~~H~-~~~~ 100 (119)
T 3lwc_A 77 ETVTAGPGEIVYMPKGETVT-IRSH 100 (119)
T ss_dssp EEEEECTTCEEEECTTCEEE-EEEE
T ss_pred EEEEECCCCEEEECCCCEEE-EEcC
Confidence 35789999999999 99999 6665
No 64
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=83.24 E-value=1.9 Score=37.23 Aligned_cols=35 Identities=31% Similarity=0.375 Sum_probs=23.7
Q ss_pred eeEEEeeCCCCCCCccccCCCcEEEEEEeEEEEEE
Q 021159 170 AVNLWIGNQLSETSFHKDHYENLYTVVSGQKHFLL 204 (316)
Q Consensus 170 ~~~lwiG~~gs~t~~H~D~~~n~~~qv~G~Kr~~L 204 (316)
...+++=++|+..|.|..+.+=++..|+|+=+|.+
T Consensus 133 ~lG~v~l~PG~~yP~HsHp~EEiy~VLsG~~e~~v 167 (217)
T 4b29_A 133 RVTVGYWGPGLDYGWHEHLPEELYSVVSGRALFHL 167 (217)
T ss_dssp EEEEEEECSSCEEEEEECSSEEEEEEEEECEEEEE
T ss_pred EEEEEEECCCCcCCCCCCCCceEEEEEeCCEEEEE
Confidence 34445555667788888877777888887765554
No 65
>1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A*
Probab=83.20 E-value=4.2 Score=35.28 Aligned_cols=31 Identities=23% Similarity=0.206 Sum_probs=23.4
Q ss_pred CeeEEEeeCCCCCCCccccCC----CcEEEEEEeE
Q 021159 169 EAVNLWIGNQLSETSFHKDHY----ENLYTVVSGQ 199 (316)
Q Consensus 169 ~~~~lwiG~~gs~t~~H~D~~----~n~~~qv~G~ 199 (316)
...+.-.+.+|+.-.+|+... .=++..++|+
T Consensus 66 ~Q~n~S~s~~GvlRGlH~q~~p~~q~KlV~vv~G~ 100 (225)
T 1upi_A 66 RQVNCSVSSAGVLRGLHFAQLPPSQAKYVTCVSGS 100 (225)
T ss_dssp CEEEEEEECTTBEEEEEEECTTTCCCEEEEEEESE
T ss_pred EEEEEEeCCCCeEeeeeccCCCCCcceEEEEeCCe
Confidence 466777788899999999842 4467778887
No 66
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=83.08 E-value=0.64 Score=36.39 Aligned_cols=23 Identities=13% Similarity=0.108 Sum_probs=19.2
Q ss_pred EEEEEcCCCEEeeC-cCcceeeecC
Q 021159 276 FECTVNAGEILYLL-IWFRKAVRNS 299 (316)
Q Consensus 276 ~~~~L~pGD~LfiP-gWwH~vv~~~ 299 (316)
-..+|+|||+++|| +.-|. ..+.
T Consensus 87 ~~~~l~~GD~~~ip~g~~h~-~~~~ 110 (123)
T 3bcw_A 87 TVHAVKAGDAFIMPEGYTGR-WEVD 110 (123)
T ss_dssp CEEEEETTCEEEECTTCCCE-EEEE
T ss_pred eEEEECCCCEEEECCCCeEE-EEEC
Confidence 35789999999999 99999 5444
No 67
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=82.94 E-value=2.4 Score=38.71 Aligned_cols=36 Identities=22% Similarity=0.204 Sum_probs=24.1
Q ss_pred eeEEEeeCCCCCCCccccCCC-cEEEEEEeEEEEEEe
Q 021159 170 AVNLWIGNQLSETSFHKDHYE-NLYTVVSGQKHFLLL 205 (316)
Q Consensus 170 ~~~lwiG~~gs~t~~H~D~~~-n~~~qv~G~Kr~~L~ 205 (316)
..++....+|+...+|+.... -.+..|+|+=++.|.
T Consensus 273 q~~ls~~~~g~~rg~h~h~~~~e~~~~~~G~~~~~~~ 309 (369)
T 3st7_A 273 QVSVNISKPGITKGNHWHHTKNEKFLVVSGKGVIRFR 309 (369)
T ss_dssp EEEEEEECTTCEEEEEECSSCCEEEEEEESEEEEEEE
T ss_pred eEEEEEecCCceeccccccCcceEEEEEeeeEEEEEE
Confidence 345555667788888887543 357788888766664
No 68
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=82.89 E-value=1.8 Score=36.36 Aligned_cols=31 Identities=13% Similarity=-0.018 Sum_probs=22.1
Q ss_pred CeeEEEeeCCCCCCCcccc---CCCcEEEEEEeE
Q 021159 169 EAVNLWIGNQLSETSFHKD---HYENLYTVVSGQ 199 (316)
Q Consensus 169 ~~~~lwiG~~gs~t~~H~D---~~~n~~~qv~G~ 199 (316)
...+.-.+.+|+.-.+|+. ...=++..++|+
T Consensus 49 ~Q~n~S~s~~GvlRG~H~q~p~~q~Klv~vv~G~ 82 (184)
T 2ixk_A 49 VQDNHSRSARGVLRGLHYQIRQAQGKLVRATLGE 82 (184)
T ss_dssp CEEEEEEEETTBEEEEEEESSSCCCEEEEEEESE
T ss_pred EEEEEEeCCCCceeeEEeCCCCCcCEEEEEeCCe
Confidence 3556666778999999988 223356777887
No 69
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=82.67 E-value=1 Score=43.01 Aligned_cols=23 Identities=9% Similarity=-0.214 Sum_probs=19.0
Q ss_pred EEEEEcCCCEEeeC-cCcceeeec
Q 021159 276 FECTVNAGEILYLL-IWFRKAVRN 298 (316)
Q Consensus 276 ~~~~L~pGD~LfiP-gWwH~vv~~ 298 (316)
.+..|++||+++|| |..|...+.
T Consensus 103 ~~~~l~~GDv~~iP~G~~H~~~N~ 126 (434)
T 2ea7_A 103 DSYILEQGHAQKIPAGTTFFLVNP 126 (434)
T ss_dssp EEEEEETTEEEEECTTCEEEEEEC
T ss_pred EEEEeCCCCEEEECCCccEEEEeC
Confidence 35689999999999 999994443
No 70
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=82.65 E-value=1.9 Score=36.34 Aligned_cols=31 Identities=16% Similarity=0.096 Sum_probs=22.2
Q ss_pred CeeEEEeeCCCCCCCcccc--C-CCcEEEEEEeE
Q 021159 169 EAVNLWIGNQLSETSFHKD--H-YENLYTVVSGQ 199 (316)
Q Consensus 169 ~~~~lwiG~~gs~t~~H~D--~-~~n~~~qv~G~ 199 (316)
...+.-.+.+|+.-.+|+. . ..=++..++|+
T Consensus 48 ~Q~n~S~s~~GvlRGlH~q~p~~q~klv~vv~G~ 81 (185)
T 1ep0_A 48 VQDNESMSVRGVLRGLHFQREKPQGKLVRVIRGE 81 (185)
T ss_dssp CEEEEEEEETTBEEEEEEESSSCCCEEEEEEESE
T ss_pred EEEEEEeCcCCeEecceecCCccccEEEEEeCCe
Confidence 3566667778999999988 2 23356777887
No 71
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=82.46 E-value=0.72 Score=37.60 Aligned_cols=24 Identities=8% Similarity=0.166 Sum_probs=20.2
Q ss_pred EEEEEcCCCEEeeC-cCcceeeecCC
Q 021159 276 FECTVNAGEILYLL-IWFRKAVRNSE 300 (316)
Q Consensus 276 ~~~~L~pGD~LfiP-gWwH~vv~~~~ 300 (316)
-+.+|+|||++||| |..|. ..+.+
T Consensus 102 ~~~~l~~GD~i~iP~G~~h~-~~n~~ 126 (151)
T 4axo_A 102 RKVSASSGELIFIPKGSKIQ-FSVPD 126 (151)
T ss_dssp EEEEEETTCEEEECTTCEEE-EEEEE
T ss_pred EEEEEcCCCEEEECCCCEEE-EEeCC
Confidence 46899999999999 99999 55543
No 72
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=82.38 E-value=0.82 Score=34.37 Aligned_cols=27 Identities=7% Similarity=0.008 Sum_probs=21.5
Q ss_pred EEEEEcCCCEEeeC-cCcceeeecCCcch
Q 021159 276 FECTVNAGEILYLL-IWFRKAVRNSEVNV 303 (316)
Q Consensus 276 ~~~~L~pGD~LfiP-gWwH~vv~~~~~~v 303 (316)
-+.+|.|||+++|| +-.|. ..+.+...
T Consensus 72 ~~~~l~~Gd~~~ip~~~~H~-~~~~~~~~ 99 (116)
T 2pfw_A 72 VIKVLTAGDSFFVPPHVDHG-AVCPTGGI 99 (116)
T ss_dssp EEEEECTTCEEEECTTCCEE-EEESSCEE
T ss_pred EEEEeCCCCEEEECcCCcee-eEeCCCcE
Confidence 36789999999999 99999 55655443
No 73
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=82.23 E-value=0.8 Score=34.89 Aligned_cols=25 Identities=20% Similarity=0.216 Sum_probs=20.4
Q ss_pred EEEEcCCCEEeeC-cCcceeeecCCcc
Q 021159 277 ECTVNAGEILYLL-IWFRKAVRNSEVN 302 (316)
Q Consensus 277 ~~~L~pGD~LfiP-gWwH~vv~~~~~~ 302 (316)
+.+|+|||+++|| +=.|. +.+.+..
T Consensus 75 ~~~l~~Gd~i~ip~~~~H~-~~~~~~~ 100 (114)
T 3fjs_A 75 QRRLHQGDLLYLGAGAAHD-VNAITNT 100 (114)
T ss_dssp EEEECTTEEEEECTTCCEE-EEESSSE
T ss_pred EEEECCCCEEEECCCCcEE-EEeCCCc
Confidence 5789999999999 99999 5555443
No 74
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=82.01 E-value=3.8 Score=33.51 Aligned_cols=23 Identities=9% Similarity=0.108 Sum_probs=19.4
Q ss_pred EEEEEcCCCEEeeC-cCcceeeecC
Q 021159 276 FECTVNAGEILYLL-IWFRKAVRNS 299 (316)
Q Consensus 276 ~~~~L~pGD~LfiP-gWwH~vv~~~ 299 (316)
-+.+|+|||++||| +=+|. ..+.
T Consensus 91 ~~~~l~~GD~i~ip~g~~H~-~~n~ 114 (166)
T 3jzv_A 91 AVSAVAPYDLVTIPGWSWHQ-FRAP 114 (166)
T ss_dssp EEEEECTTCEEEECTTCCEE-EECC
T ss_pred EEEEeCCCCEEEECCCCcEE-eEeC
Confidence 36789999999999 99999 5553
No 75
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=81.79 E-value=3.5 Score=36.91 Aligned_cols=69 Identities=19% Similarity=0.257 Sum_probs=52.8
Q ss_pred eeEEEeeCCCCCCCccccCCCcEEEEEEeEEEEEEeCCCCCCCCcccccCCcccccccccCCcceeeeccCCcccccccc
Q 021159 170 AVNLWIGNQLSETSFHKDHYENLYTVVSGQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELEEPVRYVPWCS 249 (316)
Q Consensus 170 ~~~lwiG~~gs~t~~H~D~~~n~~~qv~G~Kr~~L~pP~~~~~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 249 (316)
..-+.+|++.+++.+|+|..+=++.|+.|.=++.+.
T Consensus 32 ~~V~~vgGpN~R~d~H~~~~dE~FyqlkG~m~l~~~-------------------------------------------- 67 (286)
T 2qnk_A 32 LKVMFIGGPNTRKDYHIEEGEEVFYQLEGDMVLRVL-------------------------------------------- 67 (286)
T ss_dssp EEEEEECSCBCCCCEEECSSCEEEEEEESCEEEEEE--------------------------------------------
T ss_pred EEEEEEeCCCcCccCcCCCCCeEEEEEeCeEEEEEE--------------------------------------------
Confidence 455678999999999999999999999997654431
Q ss_pred cCCCCCccccccccccCCCccCCCccEEEEEcCCCEEeeC-cCcceeeecCCcchh
Q 021159 250 VNPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLL-IWFRKAVRNSEVNVV 304 (316)
Q Consensus 250 vd~~~~~~~~~pd~~~fP~~~~~~~~~~~~L~pGD~LfiP-gWwH~vv~~~~~~v~ 304 (316)
| + .+..+++|++||+..+| +=-|.-++. ..++.
T Consensus 68 -d-------------------~-g~~~~V~i~eGemfllP~gv~HsP~r~-~et~g 101 (286)
T 2qnk_A 68 -E-------------------Q-GKHRDVVIRQGEIFLLPARVPHSPQRF-ANTVG 101 (286)
T ss_dssp -E-------------------T-TEEEEEEECTTEEEEECTTCCEEEEEC-TTCEE
T ss_pred -e-------------------C-CceeeEEECCCeEEEeCCCCCcCCccc-CCeEE
Confidence 0 0 12457999999999999 999997664 44443
No 76
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=81.68 E-value=0.97 Score=36.01 Aligned_cols=24 Identities=21% Similarity=0.207 Sum_probs=20.4
Q ss_pred cEEEEEcCCCEEeeC-cCcceeeecC
Q 021159 275 PFECTVNAGEILYLL-IWFRKAVRNS 299 (316)
Q Consensus 275 ~~~~~L~pGD~LfiP-gWwH~vv~~~ 299 (316)
.++..|.|||+++|| +-+|. ..+.
T Consensus 87 ~~~~~l~~Gd~i~ip~g~~H~-~~n~ 111 (148)
T 2oa2_A 87 HFQEEVFDDYAILIPAGTWHN-VRNT 111 (148)
T ss_dssp CEEEEEETTCEEEECTTCEEE-EEEC
T ss_pred eeeEEECCCCEEEECCCCcEE-EEEC
Confidence 367899999999999 99999 5544
No 77
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=81.57 E-value=0.72 Score=34.16 Aligned_cols=25 Identities=16% Similarity=-0.040 Sum_probs=20.3
Q ss_pred EEEEcCCCEEeeC-cCcceeeecCCcc
Q 021159 277 ECTVNAGEILYLL-IWFRKAVRNSEVN 302 (316)
Q Consensus 277 ~~~L~pGD~LfiP-gWwH~vv~~~~~~ 302 (316)
+..|+|||+++|| +-.|. ..+.+..
T Consensus 75 ~~~l~~Gd~~~ip~~~~H~-~~~~~~~ 100 (110)
T 2q30_A 75 VIPAPRGAVLVAPISTPHG-VRAVTDM 100 (110)
T ss_dssp EEEECTTEEEEEETTSCEE-EEESSSE
T ss_pred EEEECCCCEEEeCCCCcEE-EEEcCCc
Confidence 5789999999999 99999 5554433
No 78
>2c0z_A NOVW; isomerase, epimerase, antibiotic biosynthesis, RMLC-like cupin; 1.60A {Streptomyces sphaeroides} SCOP: b.82.1.1
Probab=81.32 E-value=3.4 Score=35.64 Aligned_cols=31 Identities=19% Similarity=0.131 Sum_probs=22.9
Q ss_pred CeeEEEeeCCCCCCCccccCC----CcEEEEEEeE
Q 021159 169 EAVNLWIGNQLSETSFHKDHY----ENLYTVVSGQ 199 (316)
Q Consensus 169 ~~~~lwiG~~gs~t~~H~D~~----~n~~~qv~G~ 199 (316)
...+.-.+.+|+.-.+|+... .=++..++|+
T Consensus 55 ~Q~n~S~s~~GvlRGlH~q~~p~~q~KlV~vv~G~ 89 (216)
T 2c0z_A 55 AQANLSVSVRGVVRGIHFVDVPPGQAKYVTCVRGA 89 (216)
T ss_dssp CEEEEEEEETTBEEEEEEECTTTCCCEEEEEEESE
T ss_pred EEEEEEeCCCCcEEcCEecCCCCCcceEEEEeCCe
Confidence 356666777899999999842 4467778887
No 79
>1dzr_A DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, 3\,5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A*
Probab=81.26 E-value=2.2 Score=35.76 Aligned_cols=31 Identities=13% Similarity=0.026 Sum_probs=22.4
Q ss_pred CeeEEEeeCCCCCCCccccC----CCcEEEEEEeE
Q 021159 169 EAVNLWIGNQLSETSFHKDH----YENLYTVVSGQ 199 (316)
Q Consensus 169 ~~~~lwiG~~gs~t~~H~D~----~~n~~~qv~G~ 199 (316)
...+.-.+.+|+.-.+|+.. ..=++..++|+
T Consensus 47 ~Q~n~S~s~~GvlRGlH~q~~p~~q~Klv~vv~G~ 81 (183)
T 1dzr_A 47 VQDNHSKSKKNVLRGLHFQRGENAQGKLVRCAVGE 81 (183)
T ss_dssp CEEEEEEEETTBEEEEEEECGGGCCCEEEEEEESE
T ss_pred EEEEEEeCCCCeeeeeEccCCCCCCcEEEEEeCCe
Confidence 35566677789999999973 23466778887
No 80
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=81.24 E-value=0.6 Score=34.06 Aligned_cols=23 Identities=26% Similarity=0.176 Sum_probs=19.3
Q ss_pred EEEEcCCCEEeeC-cCcceeeecCC
Q 021159 277 ECTVNAGEILYLL-IWFRKAVRNSE 300 (316)
Q Consensus 277 ~~~L~pGD~LfiP-gWwH~vv~~~~ 300 (316)
+..|+|||+++|| +-.|. ..+.+
T Consensus 69 ~~~l~~Gd~~~ip~~~~H~-~~~~~ 92 (102)
T 3d82_A 69 NITLQAGEMYVIPKGVEHK-PMAKE 92 (102)
T ss_dssp EEEEETTEEEEECTTCCBE-EEEEE
T ss_pred EEEEcCCCEEEECCCCeEe-eEcCC
Confidence 5789999999999 99999 55544
No 81
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=81.23 E-value=1.2 Score=32.26 Aligned_cols=23 Identities=22% Similarity=0.069 Sum_probs=19.4
Q ss_pred EEEEEcCCCEEeeC-cCcceeeecC
Q 021159 276 FECTVNAGEILYLL-IWFRKAVRNS 299 (316)
Q Consensus 276 ~~~~L~pGD~LfiP-gWwH~vv~~~ 299 (316)
-+..|+|||+++|| +-.|. ..+.
T Consensus 67 ~~~~l~~Gd~~~ip~~~~H~-~~~~ 90 (105)
T 1v70_A 67 EEALLAPGMAAFAPAGAPHG-VRNE 90 (105)
T ss_dssp EEEEECTTCEEEECTTSCEE-EECC
T ss_pred EEEEeCCCCEEEECCCCcEE-eEeC
Confidence 35789999999999 99999 5554
No 82
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=80.96 E-value=1.1 Score=37.86 Aligned_cols=24 Identities=21% Similarity=0.137 Sum_probs=20.3
Q ss_pred cEEEEEcCCCEEeeC-cCcceeeecC
Q 021159 275 PFECTVNAGEILYLL-IWFRKAVRNS 299 (316)
Q Consensus 275 ~~~~~L~pGD~LfiP-gWwH~vv~~~ 299 (316)
.++.+|+|||+++|| +-+|. ..+.
T Consensus 118 ~~~~~l~~GD~~~iP~g~~H~-~~N~ 142 (201)
T 1fi2_A 118 LYSRVVRAGETFVIPRGLMHF-QFNV 142 (201)
T ss_dssp EEEEEEETTCEEEECTTCCEE-EEEC
T ss_pred EEEEEECCCCEEEECCCCeEE-EEeC
Confidence 468899999999999 99999 5443
No 83
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=80.78 E-value=0.8 Score=43.83 Aligned_cols=25 Identities=0% Similarity=0.142 Sum_probs=21.6
Q ss_pred ccEEEEEcCCCEEeeC-cCcceeeec
Q 021159 274 KPFECTVNAGEILYLL-IWFRKAVRN 298 (316)
Q Consensus 274 ~~~~~~L~pGD~LfiP-gWwH~vv~~ 298 (316)
+.+..+|++||+++|| |+.|..++.
T Consensus 321 r~~~~~l~~Gdv~vvP~g~~h~~~n~ 346 (434)
T 2ea7_A 321 QRYRAELSEDDVFVIPAAYPVAINAT 346 (434)
T ss_dssp EEEEEEECTTCEEEECTTCCEEEEES
T ss_pred EEEEEEecCCcEEEECCCCeEEEEcC
Confidence 4678899999999999 999995555
No 84
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=79.73 E-value=3.8 Score=36.88 Aligned_cols=22 Identities=9% Similarity=-0.062 Sum_probs=18.4
Q ss_pred EEEEcCCCEEeeC-cCcceeeecC
Q 021159 277 ECTVNAGEILYLL-IWFRKAVRNS 299 (316)
Q Consensus 277 ~~~L~pGD~LfiP-gWwH~vv~~~ 299 (316)
..+|++||++||| +-+|. ..|.
T Consensus 86 ~~~l~~Gd~~~~p~~~~H~-~~n~ 108 (337)
T 1y3t_A 86 RYLLISGDYANIPAGTPHS-YRMQ 108 (337)
T ss_dssp EEEECTTCEEEECTTCCEE-EEEC
T ss_pred EEEECCCCEEEECCCCcEE-EEEC
Confidence 4679999999999 99999 5454
No 85
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=79.46 E-value=1.2 Score=33.83 Aligned_cols=22 Identities=9% Similarity=0.083 Sum_probs=18.5
Q ss_pred EEEcCCCEEeeC-cCcceeeecC
Q 021159 278 CTVNAGEILYLL-IWFRKAVRNS 299 (316)
Q Consensus 278 ~~L~pGD~LfiP-gWwH~vv~~~ 299 (316)
..|+|||++||| +=.|.+.+..
T Consensus 75 ~~l~~Gd~i~ipa~~~H~~~n~~ 97 (112)
T 2opk_A 75 RVMRPGDWLHVPAHCRHRVAWTD 97 (112)
T ss_dssp EEECTTEEEEECTTCCEEEEEEC
T ss_pred EEECCCCEEEECCCCcEEEEeCC
Confidence 679999999999 9999954443
No 86
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=78.34 E-value=0.98 Score=43.30 Aligned_cols=32 Identities=13% Similarity=0.128 Sum_probs=26.3
Q ss_pred EEEEEcCCCEEeeC-cCcceeeecCCcchhhhc
Q 021159 276 FECTVNAGEILYLL-IWFRKAVRNSEVNVVELM 307 (316)
Q Consensus 276 ~~~~L~pGD~LfiP-gWwH~vv~~~~~~v~~~~ 307 (316)
-.+.|+|||++||| |=.|...+...+-||++.
T Consensus 266 N~v~L~pGea~flpAg~~HAYl~G~~vE~Ma~S 298 (440)
T 1pmi_A 266 NHVGLNKGEAMFLQAKDPHAYISGDIIECMAAS 298 (440)
T ss_dssp EEEEECTTCEEEECTTCCEEEEEEEEEEEEESC
T ss_pred ceEecCCCCEEecCCCCccccCCCcEEEEeccC
Confidence 47899999999999 999997777666666554
No 87
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=78.18 E-value=1.2 Score=42.70 Aligned_cols=25 Identities=12% Similarity=0.267 Sum_probs=21.9
Q ss_pred ccEEEEEcCCCEEeeC-cCcceeeec
Q 021159 274 KPFECTVNAGEILYLL-IWFRKAVRN 298 (316)
Q Consensus 274 ~~~~~~L~pGD~LfiP-gWwH~vv~~ 298 (316)
+.++.+|++||+++|| |+.|..++.
T Consensus 334 ~~~~~~l~~GdV~vvP~g~~h~~~n~ 359 (445)
T 2cav_A 334 RRYAATLSEGDIIVIPSSFPVALKAA 359 (445)
T ss_dssp EEEEEEECTTCEEEECTTCCEEEEES
T ss_pred EEEEeEecCCcEEEEcCCcEEEEEcC
Confidence 4689999999999999 999995555
No 88
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=78.16 E-value=1.6 Score=32.27 Aligned_cols=22 Identities=18% Similarity=0.283 Sum_probs=18.9
Q ss_pred EEEEcCCCEEeeC-cCcceeeecC
Q 021159 277 ECTVNAGEILYLL-IWFRKAVRNS 299 (316)
Q Consensus 277 ~~~L~pGD~LfiP-gWwH~vv~~~ 299 (316)
+..|+|||+++|| +-+|. ..+.
T Consensus 63 ~~~l~~Gd~~~i~~~~~H~-~~~~ 85 (113)
T 2gu9_A 63 TQALQAGSLIAIERGQAHE-IRNT 85 (113)
T ss_dssp EEEECTTEEEEECTTCCEE-EECC
T ss_pred EEEeCCCCEEEECCCCcEE-eEcC
Confidence 4689999999999 99999 5554
No 89
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=77.53 E-value=3.8 Score=37.75 Aligned_cols=23 Identities=9% Similarity=0.099 Sum_probs=19.6
Q ss_pred EEEEcCCCEEeeC-cCcceeeecCC
Q 021159 277 ECTVNAGEILYLL-IWFRKAVRNSE 300 (316)
Q Consensus 277 ~~~L~pGD~LfiP-gWwH~vv~~~~ 300 (316)
+.+|++||++||| +-.|. +.+.+
T Consensus 292 ~~~l~~Gd~~~iPag~~h~-~~~~~ 315 (350)
T 1juh_A 292 ATELGSGDVAFIPGGVEFK-YYSEA 315 (350)
T ss_dssp CEEECTTCEEEECTTCCEE-EEESS
T ss_pred EEEeCCCCEEEECCCCCEE-EEecC
Confidence 5699999999999 99999 55543
No 90
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=77.49 E-value=5 Score=37.11 Aligned_cols=23 Identities=13% Similarity=0.060 Sum_probs=19.4
Q ss_pred cEEEEEcCCCEEeeC-cCcceeee
Q 021159 275 PFECTVNAGEILYLL-IWFRKAVR 297 (316)
Q Consensus 275 ~~~~~L~pGD~LfiP-gWwH~vv~ 297 (316)
..+.+|++||++||| +.+|...+
T Consensus 300 ~~~~~l~~GD~~~ip~~~~H~~~n 323 (385)
T 1j58_A 300 ARTFNYQAGDVGYVPFAMGHYVEN 323 (385)
T ss_dssp EEEEEEESSCEEEECTTCBEEEEE
T ss_pred EEEEEEcCCCEEEECCCCeEEEEE
Confidence 356889999999999 99999443
No 91
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=77.32 E-value=1.3 Score=34.91 Aligned_cols=24 Identities=8% Similarity=0.095 Sum_probs=19.4
Q ss_pred EEEEEcCCCEEeeC-cCcceeeecCC
Q 021159 276 FECTVNAGEILYLL-IWFRKAVRNSE 300 (316)
Q Consensus 276 ~~~~L~pGD~LfiP-gWwH~vv~~~~ 300 (316)
-+.+|+|||++||| +..|. ..+.+
T Consensus 93 ~~~~l~~GD~i~~p~g~~h~-~~~~~ 117 (133)
T 2pyt_A 93 ETMIAKAGDVMFIPKGSSIE-FGTPT 117 (133)
T ss_dssp EEEEEETTCEEEECTTCEEE-EEEEE
T ss_pred EEEEECCCcEEEECCCCEEE-EEeCC
Confidence 45689999999999 99999 44443
No 92
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=77.18 E-value=1.2 Score=35.82 Aligned_cols=29 Identities=3% Similarity=0.102 Sum_probs=23.5
Q ss_pred EEEEEcCCCEEeeC-cCcceeeecCCcchh
Q 021159 276 FECTVNAGEILYLL-IWFRKAVRNSEVNVV 304 (316)
Q Consensus 276 ~~~~L~pGD~LfiP-gWwH~vv~~~~~~v~ 304 (316)
-.+.|+|||+..|| |=||..++..+.-||
T Consensus 76 ~~V~l~~Ge~yvVPkGveH~p~a~~e~~vL 105 (140)
T 3d0j_A 76 ELTLMEKGKVYNVPAECWFYSITQKDTKMM 105 (140)
T ss_dssp EEEECCTTCCEEECTTCEEEEEECTTCEEE
T ss_pred ceEEecCCCEEEeCCCccCcccCCCceEEE
Confidence 56899999999999 999996666555443
No 93
>4hn1_A Putative 3-epimerase in D-allose pathway; 3'-monoepimerase, natural product, deoxysugar, chalcomycin, mycinose, cupin fold; HET: TYD THM; 1.60A {Streptomyces bikiniensis} PDB: 4hmz_A* 4hn0_A
Probab=77.08 E-value=9.1 Score=32.53 Aligned_cols=78 Identities=13% Similarity=0.065 Sum_probs=50.5
Q ss_pred CeeEEEeeCCCCCCCccccC----CCcEEEEEEeEEEEEEeCCCCCCCCcccccCCcccccccccCCcceeeeccCCccc
Q 021159 169 EAVNLWIGNQLSETSFHKDH----YENLYTVVSGQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELEEPVRY 244 (316)
Q Consensus 169 ~~~~lwiG~~gs~t~~H~D~----~~n~~~qv~G~Kr~~L~pP~~~~~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (316)
...|.-.+.+|+.-.+|+.. ..=++..++|+=.-++
T Consensus 44 vQ~n~S~S~~GvlRGlH~q~~p~~q~KlV~~~~G~v~DV~---------------------------------------- 83 (201)
T 4hn1_A 44 AQVNVAVSHRGALRGINYTEIPPGQAKYSVCVRGAGLDVV---------------------------------------- 83 (201)
T ss_dssp CEEEEEEECTTBEEEEEEECSSSCCCEEEEEEESEEEEEE----------------------------------------
T ss_pred eEEEEEEcCCCceEEEEecCCCCCceEEEEEeCCeEEEEE----------------------------------------
Confidence 46677778899999999973 2346677788732222
Q ss_pred ccccccCCCCCccccccccccCCCccCCCccEEEEEcC--CCEEeeC-cCcceeeecCCcchh
Q 021159 245 VPWCSVNPYPSPETRESEMAKFPLYFNGPKPFECTVNA--GEILYLL-IWFRKAVRNSEVNVV 304 (316)
Q Consensus 245 ~~~s~vd~~~~~~~~~pd~~~fP~~~~~~~~~~~~L~p--GD~LfiP-gWwH~vv~~~~~~v~ 304 (316)
||+ ...-|.|. +...++|.+ +-+|||| |.||-.....+.+++
T Consensus 84 -----VDl----------R~~SpTfG---~w~~v~Ls~en~~~l~IP~GfaHGF~~Lsd~a~~ 128 (201)
T 4hn1_A 84 -----VDV----------RIGSPTFG---RWEIVPMDAERNTAVYLTAGLGRAFLSLTDDATL 128 (201)
T ss_dssp -----ECC----------CBTCTTTT---CEEEEEEETTTCCEEEECTTCEEEEEECSTTEEE
T ss_pred -----EEC----------CCCCCCCC---eEEEEEecCCCCCEEEeCCcceEEEeecCCCeEE
Confidence 232 12234443 355666765 8899999 999996666655443
No 94
>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A
Probab=76.22 E-value=3.9 Score=34.70 Aligned_cols=31 Identities=13% Similarity=0.134 Sum_probs=21.7
Q ss_pred eeEEEeeCCCCCCCccccCC----CcEEEEEEeEE
Q 021159 170 AVNLWIGNQLSETSFHKDHY----ENLYTVVSGQK 200 (316)
Q Consensus 170 ~~~lwiG~~gs~t~~H~D~~----~n~~~qv~G~K 200 (316)
..+.-.+.+|+.-.+|+... .=++..++|+=
T Consensus 66 Q~n~S~s~~GvlRGlH~q~~p~~q~Klv~vv~G~v 100 (196)
T 1wlt_A 66 QTNMSFSRKGVVRGLHYQRTPKEQGKIIFVPKGRI 100 (196)
T ss_dssp EEEEEEECTTBEEEEEEECTTSCCEEEEEEEESEE
T ss_pred EEEEEECCCCcceeEEccCCCCCCceEEEEeCCEE
Confidence 45666777899999998742 33566677764
No 95
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=75.70 E-value=2.2 Score=33.22 Aligned_cols=23 Identities=13% Similarity=0.023 Sum_probs=19.6
Q ss_pred EEEEEcCCCEEeeC-cCcceeeecC
Q 021159 276 FECTVNAGEILYLL-IWFRKAVRNS 299 (316)
Q Consensus 276 ~~~~L~pGD~LfiP-gWwH~vv~~~ 299 (316)
-+.+|+|||+++|| +-.|. ..+.
T Consensus 79 ~~~~l~~Gd~~~ip~~~~H~-~~~~ 102 (145)
T 3ht1_A 79 RTEEVGPGEAIFIPRGEPHG-FVTG 102 (145)
T ss_dssp EEEEECTTCEEEECTTCCBE-EECC
T ss_pred EEEEECCCCEEEECCCCeEE-eEcC
Confidence 46789999999999 99999 5554
No 96
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=75.55 E-value=6.4 Score=32.50 Aligned_cols=37 Identities=14% Similarity=0.003 Sum_probs=25.0
Q ss_pred eeEEEeeCCCCCCCccccCC-CcEEEEEEeEEEEEEeC
Q 021159 170 AVNLWIGNQLSETSFHKDHY-ENLYTVVSGQKHFLLLP 206 (316)
Q Consensus 170 ~~~lwiG~~gs~t~~H~D~~-~n~~~qv~G~Kr~~L~p 206 (316)
...++.=.+|..|+.|-... ..++.+++|+=+-+.|.
T Consensus 70 ~v~~l~W~PGq~S~iHdH~~s~~~~~VL~G~l~e~~y~ 107 (171)
T 3eqe_A 70 EIIVINIPPNKETTVHDHGQSIGCAMVLEGKLLNSIYR 107 (171)
T ss_dssp EEEEEEECTTCBCCEECCTTCEEEEEEEESEEEEEEEE
T ss_pred EEEEEEECCCCCcccccCCCceEEEEEEeeeEEEEEee
Confidence 33444445678899986543 35677899998877754
No 97
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=75.06 E-value=1.8 Score=32.05 Aligned_cols=23 Identities=17% Similarity=0.147 Sum_probs=19.4
Q ss_pred EEEEEcCCCEEeeC-cCcceeeecC
Q 021159 276 FECTVNAGEILYLL-IWFRKAVRNS 299 (316)
Q Consensus 276 ~~~~L~pGD~LfiP-gWwH~vv~~~ 299 (316)
-..+|+|||+++|| +=.|. ..+.
T Consensus 67 ~~~~l~~Gd~~~ip~~~~H~-~~~~ 90 (107)
T 2i45_A 67 GSMTIREGEMAVVPKSVSHR-PRSE 90 (107)
T ss_dssp CEEEECTTEEEEECTTCCEE-EEEE
T ss_pred cEEEECCCCEEEECCCCcEe-eEeC
Confidence 36789999999999 99999 5553
No 98
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=74.96 E-value=7 Score=33.30 Aligned_cols=36 Identities=11% Similarity=0.100 Sum_probs=27.3
Q ss_pred eeEEEeeCCCCCCCccccCCCcEEEEEEeEEEEEEe
Q 021159 170 AVNLWIGNQLSETSFHKDHYENLYTVVSGQKHFLLL 205 (316)
Q Consensus 170 ~~~lwiG~~gs~t~~H~D~~~n~~~qv~G~Kr~~L~ 205 (316)
...+..=.+|..|+.|-.....++.+++|+=+-++|
T Consensus 80 ~v~~l~w~PGq~spiHdH~~~~~~~VL~G~l~e~~y 115 (208)
T 2gm6_A 80 SIVSFVWGPGQRTPIHDHTVWGLIGMLRGAEYSQPF 115 (208)
T ss_dssp EEEEEEECTTCBCCSBCCSSCEEEEEEESCEEEEEE
T ss_pred EEEEEEeCCCcccCcccCCcceEEEEecccEEEEEe
Confidence 344445577899999988766778899998877765
No 99
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=74.63 E-value=1.5 Score=36.64 Aligned_cols=26 Identities=4% Similarity=-0.005 Sum_probs=21.1
Q ss_pred ccEEEEEcCCCEEeeC-cCcceeeecCC
Q 021159 274 KPFECTVNAGEILYLL-IWFRKAVRNSE 300 (316)
Q Consensus 274 ~~~~~~L~pGD~LfiP-gWwH~vv~~~~ 300 (316)
..+.+.+++||+|+|| |=+|. ..+.+
T Consensus 120 ~~~~~~l~~GDli~IP~g~~H~-~~~~~ 146 (179)
T 1zrr_A 120 EVFQVLCEKNDLISVPAHTPHW-FDMGS 146 (179)
T ss_dssp CEEEEECCCSCEEEECTTCCBC-CCCSS
T ss_pred EEEEEEECCCCEEEECCCCeEe-eecCC
Confidence 3567899999999999 99999 44433
No 100
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=73.77 E-value=4.9 Score=34.72 Aligned_cols=24 Identities=21% Similarity=0.041 Sum_probs=19.2
Q ss_pred EEEEEcCCCEEe-eC-cCcceeeecCC
Q 021159 276 FECTVNAGEILY-LL-IWFRKAVRNSE 300 (316)
Q Consensus 276 ~~~~L~pGD~Lf-iP-gWwH~vv~~~~ 300 (316)
-+.+|.|||++| || +-+|. +.+.+
T Consensus 72 ~~~~l~~Gd~i~~ip~~~~H~-~~n~~ 97 (243)
T 3h7j_A 72 VTRKMTALESAYIAPPHVPHG-ARNDT 97 (243)
T ss_dssp EEEEEETTTCEEEECTTCCEE-EEECS
T ss_pred EEEEECCCCEEEEcCCCCcEe-eEeCC
Confidence 356899999997 99 99999 55543
No 101
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=72.56 E-value=9.3 Score=32.67 Aligned_cols=37 Identities=14% Similarity=0.057 Sum_probs=28.0
Q ss_pred eeEEEeeCCCCCCCccccCCCcEEEEEEeEEEEEEeC
Q 021159 170 AVNLWIGNQLSETSFHKDHYENLYTVVSGQKHFLLLP 206 (316)
Q Consensus 170 ~~~lwiG~~gs~t~~H~D~~~n~~~qv~G~Kr~~L~p 206 (316)
...+..=.+|..|+.|=.....++.+++|.=+-+.|.
T Consensus 74 ~v~~l~W~PGq~spiHDH~swg~~~Vl~G~l~e~~y~ 110 (211)
T 3uss_A 74 SVVSFVWGPGQITPVHDHRVWGLIGMLRGAEYSQPYA 110 (211)
T ss_dssp EEEEEEECTTCBCCSBCCSSCEEEEEEESCEEEEEEE
T ss_pred EEEEEEECCCCcCCCCCCCeeEEEEeeeceEEEEEee
Confidence 4455566778899999777677788999988776654
No 102
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=72.52 E-value=2.8 Score=33.68 Aligned_cols=22 Identities=9% Similarity=0.184 Sum_probs=18.9
Q ss_pred EEEEcCCCEEeeC-c-CcceeeecC
Q 021159 277 ECTVNAGEILYLL-I-WFRKAVRNS 299 (316)
Q Consensus 277 ~~~L~pGD~LfiP-g-WwH~vv~~~ 299 (316)
+.+|+|||+++|| + -.|. ..|.
T Consensus 87 ~~~l~~Gd~i~i~~~~~~H~-~~n~ 110 (162)
T 3l2h_A 87 QYPIAPGDFVGFPCHAAAHS-ISND 110 (162)
T ss_dssp EEEECTTCEEEECTTSCCEE-EECC
T ss_pred EEEeCCCCEEEECCCCceEE-eEeC
Confidence 5789999999999 9 9999 5553
No 103
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=72.23 E-value=1.8 Score=40.79 Aligned_cols=30 Identities=17% Similarity=0.254 Sum_probs=23.2
Q ss_pred EEEEEcCCCEEeeC-cCcceeeecCCcchhh
Q 021159 276 FECTVNAGEILYLL-IWFRKAVRNSEVNVVE 305 (316)
Q Consensus 276 ~~~~L~pGD~LfiP-gWwH~vv~~~~~~v~~ 305 (316)
-.+.|+|||++||| |=.|......-.-||+
T Consensus 240 n~v~l~pGd~~fipAG~~HAy~~G~~~Eima 270 (394)
T 2wfp_A 240 NVVKLNPGEAMFLFAETPHAYLQGVALEVMA 270 (394)
T ss_dssp EEEEECTTCEEEECTTCCEEEEEEEEEEEEC
T ss_pred eEEECCCCCEEEcCCCCceEcCCCcEEEEec
Confidence 47899999999999 9999966554333443
No 104
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=72.03 E-value=3.1 Score=39.85 Aligned_cols=23 Identities=9% Similarity=-0.060 Sum_probs=19.2
Q ss_pred EEEEEcCCCEEeeC-cCcceeeecC
Q 021159 276 FECTVNAGEILYLL-IWFRKAVRNS 299 (316)
Q Consensus 276 ~~~~L~pGD~LfiP-gWwH~vv~~~ 299 (316)
.+..|++||++|+| |--|. +.|.
T Consensus 128 ~~~~l~~GDv~~~P~G~~H~-~~N~ 151 (445)
T 2cav_A 128 DTYKLDQGDAIKIQAGTPFY-LINP 151 (445)
T ss_dssp EEEEEETTEEEEECTTCCEE-EEEC
T ss_pred EEEEecCCCEEEECCCCcEE-EEEC
Confidence 45689999999999 99999 5454
No 105
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=71.55 E-value=9.2 Score=32.62 Aligned_cols=26 Identities=23% Similarity=0.022 Sum_probs=21.0
Q ss_pred EEEEEcCCCEEeeC-cCcceeeec-CCcc
Q 021159 276 FECTVNAGEILYLL-IWFRKAVRN-SEVN 302 (316)
Q Consensus 276 ~~~~L~pGD~LfiP-gWwH~vv~~-~~~~ 302 (316)
-+..|+|||+++|| +-.|. +.+ .+..
T Consensus 191 ~~~~l~~Gd~i~ip~~~~H~-~~~~~~~~ 218 (227)
T 3rns_A 191 KPFIVKKGESAVLPANIPHA-VEAETENF 218 (227)
T ss_dssp EEEEEETTEEEEECTTSCEE-EECCSSCE
T ss_pred EEEEECCCCEEEECCCCcEE-EEeCCCCE
Confidence 36789999999999 99999 656 4433
No 106
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=71.28 E-value=2.2 Score=39.45 Aligned_cols=23 Identities=13% Similarity=0.198 Sum_probs=19.8
Q ss_pred EEEEEcCCCEEeeC-cCcceeeecC
Q 021159 276 FECTVNAGEILYLL-IWFRKAVRNS 299 (316)
Q Consensus 276 ~~~~L~pGD~LfiP-gWwH~vv~~~ 299 (316)
-+..|++||++||| +.||. ..|.
T Consensus 139 ~~~~l~~GD~~~iP~g~~H~-~~n~ 162 (354)
T 2d40_A 139 ERTPMNEGDFILTPQWRWHD-HGNP 162 (354)
T ss_dssp EEEECCTTCEEEECTTSCEE-EECC
T ss_pred EEEEEcCCCEEEECCCCcEE-eEeC
Confidence 46889999999999 99999 5554
No 107
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=71.23 E-value=12 Score=33.51 Aligned_cols=23 Identities=22% Similarity=0.190 Sum_probs=19.6
Q ss_pred EEEEEcCCCEEeeC-cCcceeeecC
Q 021159 276 FECTVNAGEILYLL-IWFRKAVRNS 299 (316)
Q Consensus 276 ~~~~L~pGD~LfiP-gWwH~vv~~~ 299 (316)
-+..|++||++||| +-.|. ..+.
T Consensus 257 ~~~~l~~GD~~~ip~~~~H~-~~n~ 280 (337)
T 1y3t_A 257 QEIQLNPGDFLHVPANTVHS-YRLD 280 (337)
T ss_dssp EEEEECTTCEEEECTTCCEE-EEEC
T ss_pred EEEEECCCCEEEECCCCeEE-EEEC
Confidence 56899999999999 99999 5444
No 108
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=71.09 E-value=2.5 Score=32.87 Aligned_cols=23 Identities=13% Similarity=0.211 Sum_probs=19.5
Q ss_pred EEEEEcCCCEEeeC-cCcceeeecC
Q 021159 276 FECTVNAGEILYLL-IWFRKAVRNS 299 (316)
Q Consensus 276 ~~~~L~pGD~LfiP-gWwH~vv~~~ 299 (316)
-+.+|+|||++++| +-.|. ..+.
T Consensus 96 ~~~~l~~Gd~i~i~~~~~H~-~~n~ 119 (133)
T 1o4t_A 96 KDVPIKAGDVCFTDSGESHS-IENT 119 (133)
T ss_dssp EEEEEETTEEEEECTTCEEE-EECC
T ss_pred EEEEeCCCcEEEECCCCcEE-eEEC
Confidence 46789999999999 99999 5554
No 109
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=70.62 E-value=2.5 Score=35.01 Aligned_cols=23 Identities=9% Similarity=0.075 Sum_probs=19.7
Q ss_pred EEEEEcCCCEEeeC-cCcceeeecC
Q 021159 276 FECTVNAGEILYLL-IWFRKAVRNS 299 (316)
Q Consensus 276 ~~~~L~pGD~LfiP-gWwH~vv~~~ 299 (316)
-+.+|+|||++|+| +-.|. ..+.
T Consensus 162 ~~~~l~~GD~~~~~~~~~H~-~~n~ 185 (198)
T 2bnm_A 162 KEALLPTGASMFVEEHVPHA-FTAA 185 (198)
T ss_dssp EEEEECTTCEEEECTTCCEE-EEES
T ss_pred ccEEECCCCEEEeCCCCceE-EEec
Confidence 56799999999999 99999 5554
No 110
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=70.31 E-value=17 Score=28.65 Aligned_cols=21 Identities=5% Similarity=0.018 Sum_probs=17.5
Q ss_pred EEEcCCCEEeeC-cCcceeeecC
Q 021159 278 CTVNAGEILYLL-IWFRKAVRNS 299 (316)
Q Consensus 278 ~~L~pGD~LfiP-gWwH~vv~~~ 299 (316)
..|+|||+++|| +=.|. ..+.
T Consensus 89 ~~l~~Gd~i~ip~~~~H~-~~n~ 110 (147)
T 2f4p_A 89 RILKKGDVVEIPPNVVHW-HGAA 110 (147)
T ss_dssp EEEETTCEEEECTTCCEE-EEEB
T ss_pred EEECCCCEEEECCCCcEE-eEeC
Confidence 578999999999 99998 4443
No 111
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=69.69 E-value=3.4 Score=33.51 Aligned_cols=23 Identities=13% Similarity=-0.114 Sum_probs=19.3
Q ss_pred EEEEEcCCCEEeeC-c--CcceeeecC
Q 021159 276 FECTVNAGEILYLL-I--WFRKAVRNS 299 (316)
Q Consensus 276 ~~~~L~pGD~LfiP-g--WwH~vv~~~ 299 (316)
-+.+|++||+++|| + -.|. +.|.
T Consensus 83 ~~~~l~~GD~i~ip~~~~~~H~-~~n~ 108 (163)
T 3i7d_A 83 GEHPMVPGDCAAFPAGDPNGHQ-FVNR 108 (163)
T ss_dssp EEEEECTTCEEEECTTCCCCBE-EECC
T ss_pred EEEEeCCCCEEEECCCCCcceE-EEEC
Confidence 36789999999999 9 8999 5553
No 112
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=69.52 E-value=4.5 Score=39.24 Aligned_cols=38 Identities=13% Similarity=0.026 Sum_probs=28.5
Q ss_pred eEEEeeCCCCCCCccccCCCcEEEEEEeEEEEEEeCCCC
Q 021159 171 VNLWIGNQLSETSFHKDHYENLYTVVSGQKHFLLLPPTD 209 (316)
Q Consensus 171 ~~lwiG~~gs~t~~H~D~~~n~~~qv~G~Kr~~L~pP~~ 209 (316)
..+-|.+ |+....||....-++.++.|+=.+.+.-|..
T Consensus 48 ~r~~i~p-ggl~~Ph~~~~~~i~yV~~G~g~vg~v~pgc 85 (493)
T 2d5f_A 48 SKRTLNR-NGLHLPSYSPYPQMIIVVQGKGAIGFAFPGC 85 (493)
T ss_dssp EEEEECT-TEEEEEEECSSCEEEEEEECEEEEEECCTTC
T ss_pred EEEEeCC-CcEeCceecCCCeEEEEEeCEEEEEEEeCCC
Confidence 3444555 4667788876777889999999999998765
No 113
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=69.18 E-value=2.1 Score=33.15 Aligned_cols=18 Identities=11% Similarity=0.137 Sum_probs=15.4
Q ss_pred EEEEcCCCEEeeC-cCcce
Q 021159 277 ECTVNAGEILYLL-IWFRK 294 (316)
Q Consensus 277 ~~~L~pGD~LfiP-gWwH~ 294 (316)
..+++|||++++| ||--.
T Consensus 81 ~~~l~aGD~~~~P~G~~gt 99 (116)
T 3es4_A 81 PVKIGPGSIVSIAKGVPSR 99 (116)
T ss_dssp CEEECTTEEEEECTTCCEE
T ss_pred EEEECCCCEEEECCCCeEE
Confidence 5789999999999 99643
No 114
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=68.82 E-value=3 Score=31.79 Aligned_cols=22 Identities=18% Similarity=0.229 Sum_probs=18.7
Q ss_pred EEEEcCCCEEeeC-cCcceeeecC
Q 021159 277 ECTVNAGEILYLL-IWFRKAVRNS 299 (316)
Q Consensus 277 ~~~L~pGD~LfiP-gWwH~vv~~~ 299 (316)
+..|+|||+++|| +-.|. ..+.
T Consensus 67 ~~~l~~Gd~i~i~~~~~H~-~~~~ 89 (125)
T 3cew_A 67 KIELQAGDWLRIAPDGKRQ-ISAA 89 (125)
T ss_dssp EEEEETTEEEEECTTCCEE-EEEB
T ss_pred EEEeCCCCEEEECCCCcEE-EEcC
Confidence 5789999999999 99999 4443
No 115
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=68.41 E-value=2 Score=38.95 Aligned_cols=24 Identities=0% Similarity=-0.263 Sum_probs=20.0
Q ss_pred EEEEEcCCCEEeeC-cCcceeeecC
Q 021159 276 FECTVNAGEILYLL-IWFRKAVRNS 299 (316)
Q Consensus 276 ~~~~L~pGD~LfiP-gWwH~vv~~~ 299 (316)
-.+.|+|||++||| |-.|......
T Consensus 158 n~v~l~pGd~~~ipaGt~HA~~~G~ 182 (300)
T 1zx5_A 158 NTFETTPYDTFVIRPGIPHAGEGLR 182 (300)
T ss_dssp EEEECCTTCEEEECTTCCEEEESEE
T ss_pred ceeECCCCCEEEcCCCCceEcCCCC
Confidence 47889999999999 9999954433
No 116
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=68.34 E-value=2.7 Score=35.56 Aligned_cols=24 Identities=8% Similarity=0.180 Sum_probs=20.3
Q ss_pred cEEEEEcCCCEEeeC-cCcceeeecC
Q 021159 275 PFECTVNAGEILYLL-IWFRKAVRNS 299 (316)
Q Consensus 275 ~~~~~L~pGD~LfiP-gWwH~vv~~~ 299 (316)
.+++.++|||+|+|| |=+|. ..+.
T Consensus 126 ~~~i~v~~GDlIiIPaG~~H~-f~~~ 150 (191)
T 1vr3_A 126 WIRISMEKGDMITLPAGIYHR-FTLD 150 (191)
T ss_dssp EEEEEEETTEEEEECTTCCEE-EEEC
T ss_pred EEEEEECCCCEEEECcCCcCC-cccC
Confidence 467899999999999 99999 4443
No 117
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=68.33 E-value=3 Score=31.76 Aligned_cols=23 Identities=17% Similarity=0.179 Sum_probs=19.2
Q ss_pred EEEEEcCCCEEeeC-cCcceeeecC
Q 021159 276 FECTVNAGEILYLL-IWFRKAVRNS 299 (316)
Q Consensus 276 ~~~~L~pGD~LfiP-gWwH~vv~~~ 299 (316)
-+..|+|||+++|| +=.|. ..+.
T Consensus 72 ~~~~l~~Gd~~~i~~~~~H~-~~~~ 95 (128)
T 4i4a_A 72 EDFPVTKGDLIIIPLDSEHH-VINN 95 (128)
T ss_dssp EEEEEETTCEEEECTTCCEE-EEEC
T ss_pred EEEEECCCcEEEECCCCcEE-eEeC
Confidence 36789999999999 99999 5543
No 118
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=67.38 E-value=6.7 Score=32.42 Aligned_cols=21 Identities=29% Similarity=0.202 Sum_probs=17.8
Q ss_pred EEEEcCCCEEeeC-cCcceeeecC
Q 021159 277 ECTVNAGEILYLL-IWFRKAVRNS 299 (316)
Q Consensus 277 ~~~L~pGD~LfiP-gWwH~vv~~~ 299 (316)
+.+|+|||++ +| +-.|. ..|.
T Consensus 119 ~~~L~~GDsi-~~~g~~H~-~~N~ 140 (172)
T 3es1_A 119 KRTVRQGGII-VQRGTNHL-WRNT 140 (172)
T ss_dssp EEEECTTCEE-EECSCCBE-EECC
T ss_pred EEEECCCCEE-EeCCCcEE-EEeC
Confidence 5689999999 99 99999 5554
No 119
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=67.29 E-value=1.3 Score=33.01 Aligned_cols=23 Identities=9% Similarity=-0.106 Sum_probs=18.9
Q ss_pred EEEEcCCCEEeeC-cCcceeeecC
Q 021159 277 ECTVNAGEILYLL-IWFRKAVRNS 299 (316)
Q Consensus 277 ~~~L~pGD~LfiP-gWwH~vv~~~ 299 (316)
+..|+|||++|+| |-.|.+++..
T Consensus 60 ~~~l~aGd~~~~p~G~~H~~~N~g 83 (98)
T 2ozi_A 60 LAQLKTGRSYARKAGVQHDVRNES 83 (98)
T ss_dssp CCCBCTTCCEEECTTCEEEEEECS
T ss_pred EEEECCCCEEEECCCCceeCEECC
Confidence 5679999999999 9999944433
No 120
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=67.21 E-value=5.6 Score=38.23 Aligned_cols=37 Identities=14% Similarity=-0.172 Sum_probs=28.1
Q ss_pred EEEeeCCCCCCCccccCCCcEEEEEEeEEEEEEeCCCC
Q 021159 172 NLWIGNQLSETSFHKDHYENLYTVVSGQKHFLLLPPTD 209 (316)
Q Consensus 172 ~lwiG~~gs~t~~H~D~~~n~~~qv~G~Kr~~L~pP~~ 209 (316)
.+-|.+ |+..+.||....-++.++.|+=.+.++-|..
T Consensus 67 r~~i~p-ggl~~Ph~h~a~ei~yVl~G~g~vg~v~p~~ 103 (459)
T 2e9q_A 67 RHTIRP-KGLLLPGFSNAPKLIFVAQGFGIRGIAIPGC 103 (459)
T ss_dssp EEEECT-TEEEEEEEESSCEEEEEEECEEEEEECCTTC
T ss_pred EEEEcC-CCEecceecCCceEEEEEeeEEEEEEEeCCC
Confidence 444544 4667888876677889999999999998763
No 121
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=66.76 E-value=4.6 Score=30.01 Aligned_cols=27 Identities=15% Similarity=0.308 Sum_probs=22.0
Q ss_pred ccEEEEEcCCCEEeeC-cCcceeeecCC
Q 021159 274 KPFECTVNAGEILYLL-IWFRKAVRNSE 300 (316)
Q Consensus 274 ~~~~~~L~pGD~LfiP-gWwH~vv~~~~ 300 (316)
+.++..|++||++.|| +..=..+.+.+
T Consensus 4 ~~~~~~l~~G~v~vVPq~~~v~~~A~~~ 31 (93)
T 1dgw_Y 4 RRYAATLSEGDIIVIPSSFPVALKAASD 31 (93)
T ss_dssp EEEEEEECTTCEEEECTTCCEEEEESSS
T ss_pred chhhceecCCcEEEECCCCceeEEecCC
Confidence 5689999999999999 98877555543
No 122
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=66.73 E-value=3.8 Score=31.37 Aligned_cols=22 Identities=27% Similarity=0.287 Sum_probs=18.9
Q ss_pred EEEEcCCCEEeeC-cCcceeeecC
Q 021159 277 ECTVNAGEILYLL-IWFRKAVRNS 299 (316)
Q Consensus 277 ~~~L~pGD~LfiP-gWwH~vv~~~ 299 (316)
+.+|+|||+++|| +-.|. ..+.
T Consensus 87 ~~~l~~Gd~i~ip~g~~H~-~~~~ 109 (126)
T 1vj2_A 87 EETVEEGFYIFVEPNEIHG-FRND 109 (126)
T ss_dssp EEEEETTEEEEECTTCCEE-EECC
T ss_pred EEEECCCCEEEECCCCcEE-eEeC
Confidence 5789999999999 99999 5554
No 123
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=66.53 E-value=6.6 Score=37.89 Aligned_cols=38 Identities=8% Similarity=-0.053 Sum_probs=28.8
Q ss_pred eEEEeeCCCCCCCccccCCCcEEEEEEeEEEEEEeCCCC
Q 021159 171 VNLWIGNQLSETSFHKDHYENLYTVVSGQKHFLLLPPTD 209 (316)
Q Consensus 171 ~~lwiG~~gs~t~~H~D~~~n~~~qv~G~Kr~~L~pP~~ 209 (316)
..+-|.+ |+..+.||-+..-++.+++|+=.+.+.-|..
T Consensus 51 ~r~~l~P-ggl~~Ph~~~a~ei~yV~~G~g~~g~v~pg~ 88 (476)
T 1fxz_A 51 SRCTLNR-NALRRPSYTNGPQEIYIQQGKGIFGMIYPGC 88 (476)
T ss_dssp EEEEECT-TEEEEEEEESSCEEEEEEECCEEEEEECTTC
T ss_pred EEEEEcC-CCEecceecCCceEEEEEecEEEEEEEcCCC
Confidence 3455555 4667777766777899999999999998863
No 124
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=65.37 E-value=2.9 Score=36.57 Aligned_cols=25 Identities=8% Similarity=0.235 Sum_probs=20.9
Q ss_pred ccEEEEEcCCCEEeeC-cCcceeeecC
Q 021159 274 KPFECTVNAGEILYLL-IWFRKAVRNS 299 (316)
Q Consensus 274 ~~~~~~L~pGD~LfiP-gWwH~vv~~~ 299 (316)
..+...|+|||++||| +-.|. ..|.
T Consensus 100 ~~~~~~l~~GD~i~iP~g~~H~-~~N~ 125 (239)
T 2xlg_A 100 DLYSIQSEPKQLIYSPNHYMHG-FVNP 125 (239)
T ss_dssp EEEEEECCTTEEEEECTTEEEE-EECC
T ss_pred ceeEEEECCCCEEEECCCCCEE-EEeC
Confidence 3468899999999999 99999 5444
No 125
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=64.60 E-value=2.5 Score=38.61 Aligned_cols=22 Identities=9% Similarity=0.209 Sum_probs=19.1
Q ss_pred EEEEEcCCCEEeeC-cCcceeee
Q 021159 276 FECTVNAGEILYLL-IWFRKAVR 297 (316)
Q Consensus 276 ~~~~L~pGD~LfiP-gWwH~vv~ 297 (316)
-.+.|+|||++||| |=.|....
T Consensus 158 n~v~l~pGd~~~ipaGt~HA~~~ 180 (319)
T 1qwr_A 158 RRIKIKPGDFYYVPSGTLHALCK 180 (319)
T ss_dssp EEEECCTTCEEEECTTCCEEECS
T ss_pred eEEEcCCCCEEEcCCCCceEecC
Confidence 47889999999999 99999443
No 126
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=63.43 E-value=10 Score=36.48 Aligned_cols=42 Identities=12% Similarity=-0.029 Sum_probs=30.8
Q ss_pred eEEEeeCCCCCCCccccCCCcEEEEEEeEEEEEEeCCCCCCCCc
Q 021159 171 VNLWIGNQLSETSFHKDHYENLYTVVSGQKHFLLLPPTDVHRMY 214 (316)
Q Consensus 171 ~~lwiG~~gs~t~~H~D~~~n~~~qv~G~Kr~~L~pP~~~~~ly 214 (316)
..+-|.+ ++..+.||....-++.+++|+=.+.++-|.. +..|
T Consensus 53 ~R~~i~P-~gl~~Ph~h~a~ei~yV~qG~g~~g~v~pgc-~etf 94 (465)
T 3qac_A 53 IRRTIEP-HGLLLPSFTSAPELIYIEQGNGITGMMIPGC-PETY 94 (465)
T ss_dssp EEEEECT-TEEEEEEEESSCEEEEEEECEEEEEEECTTC-CCCC
T ss_pred EEEEEcC-CcCcccEEcCCCEEEEEEECcEEEEEecCCC-Ccee
Confidence 3444544 4678888886677899999999999998863 4444
No 127
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=61.65 E-value=4.7 Score=38.26 Aligned_cols=37 Identities=14% Similarity=-0.009 Sum_probs=27.0
Q ss_pred EEEeeCCCCCCCccccC-CCcEEEEEEeEEEEEEeCCCC
Q 021159 172 NLWIGNQLSETSFHKDH-YENLYTVVSGQKHFLLLPPTD 209 (316)
Q Consensus 172 ~lwiG~~gs~t~~H~D~-~~n~~~qv~G~Kr~~L~pP~~ 209 (316)
.+-|.+ |+..++|+.+ .+-+...++|+=++.++.|..
T Consensus 267 r~~l~p-gg~~~PH~~p~A~ei~yV~~G~g~v~vv~~~~ 304 (418)
T 3s7i_A 267 CVEIKE-GALMLPHFNSKAMVIVVVNKGTGNLELVAVRK 304 (418)
T ss_dssp EEEECT-TEEEEEEEESSCEEEEEEEECCEEEEEEEEEE
T ss_pred EEEecC-CceeCceecCCCCEEEEEEeCeEEEEEEeCCC
Confidence 344444 4678899975 355788999999999987754
No 128
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=61.28 E-value=6.1 Score=38.00 Aligned_cols=38 Identities=13% Similarity=-0.069 Sum_probs=29.0
Q ss_pred EEEeeCCCCCCCccccCCCcEEEEEEeEEEEEEeCCCCC
Q 021159 172 NLWIGNQLSETSFHKDHYENLYTVVSGQKHFLLLPPTDV 210 (316)
Q Consensus 172 ~lwiG~~gs~t~~H~D~~~n~~~qv~G~Kr~~L~pP~~~ 210 (316)
.+-|.+. +..+.||.+..-++.++.|+=.+.++.|...
T Consensus 47 r~~i~p~-Gl~lPh~~~a~e~~~V~~G~g~~G~v~pgc~ 84 (466)
T 3kgl_A 47 RYIIESK-GLYLPSFFSTAKLSFVAKGEGLMGRVVPGCA 84 (466)
T ss_dssp EEEECTT-EEEEEEEESSCEEEEEEECEEEEEEECTTCC
T ss_pred EEEECCC-CEeCCeeCCCCeEEEEEeCeEEEEEecCCCc
Confidence 4445554 5667777667788999999999999999754
No 129
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=60.38 E-value=5 Score=34.69 Aligned_cols=23 Identities=9% Similarity=-0.067 Sum_probs=19.6
Q ss_pred EEEEEcCCCEEeeC-cCcceeeecC
Q 021159 276 FECTVNAGEILYLL-IWFRKAVRNS 299 (316)
Q Consensus 276 ~~~~L~pGD~LfiP-gWwH~vv~~~ 299 (316)
-+.+|+|||+++|| +-.|. ..|.
T Consensus 184 ~~~~l~~Gd~i~ip~~~~H~-~~n~ 207 (243)
T 3h7j_A 184 CTVEMKFGTAYFCEPREDHG-AINR 207 (243)
T ss_dssp EEEEECTTCEEEECTTCCEE-EEEC
T ss_pred EEEEECCCCEEEECCCCcEE-eEeC
Confidence 46789999999999 99999 5554
No 130
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=60.38 E-value=5.4 Score=32.82 Aligned_cols=23 Identities=9% Similarity=-0.095 Sum_probs=19.6
Q ss_pred EEEEEcCCCEEeeC-cCcceeeecC
Q 021159 276 FECTVNAGEILYLL-IWFRKAVRNS 299 (316)
Q Consensus 276 ~~~~L~pGD~LfiP-gWwH~vv~~~ 299 (316)
-+.+|+|||++||| +=.|. ..+.
T Consensus 144 ~~~~l~~GD~i~i~~~~~H~-~~n~ 167 (192)
T 1y9q_A 144 QWHELQQGEHIRFFSDQPHG-YAAV 167 (192)
T ss_dssp EEEEECTTCEEEEECSSSEE-EEES
T ss_pred EEEEeCCCCEEEEcCCCCeE-eECC
Confidence 56799999999999 99999 5553
No 131
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=60.36 E-value=4.4 Score=33.10 Aligned_cols=21 Identities=5% Similarity=-0.070 Sum_probs=18.2
Q ss_pred EEEEEcCCCEEeeC-cCcceee
Q 021159 276 FECTVNAGEILYLL-IWFRKAV 296 (316)
Q Consensus 276 ~~~~L~pGD~LfiP-gWwH~vv 296 (316)
-...|+|||+++|| |=.|+++
T Consensus 86 e~~~l~~GD~v~IPpg~~H~i~ 107 (157)
T 4h7l_A 86 QSYPLTKLLAISIPPLVRHRIV 107 (157)
T ss_dssp EEEECCTTEEEEECTTCCEEEE
T ss_pred EEEEeCCCCEEEECCCCeEeeE
Confidence 35789999999999 9999954
No 132
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=58.50 E-value=5.2 Score=32.96 Aligned_cols=25 Identities=8% Similarity=-0.080 Sum_probs=20.5
Q ss_pred EEEEEcCCCEEeeC-cCcceeeecCCc
Q 021159 276 FECTVNAGEILYLL-IWFRKAVRNSEV 301 (316)
Q Consensus 276 ~~~~L~pGD~LfiP-gWwH~vv~~~~~ 301 (316)
.+.+|.+||++||| +=.|. ..|...
T Consensus 128 ~~~~L~~Gds~~iP~g~~H~-~~N~~d 153 (166)
T 2vpv_A 128 NKFLSVKGSTFQIPAFNEYA-IANRGN 153 (166)
T ss_dssp EEEEEETTCEEEECTTCEEE-EEECSS
T ss_pred EEEEEcCCCEEEECCCCCEE-EEECCC
Confidence 45689999999999 99999 656543
No 133
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=56.48 E-value=15 Score=35.59 Aligned_cols=37 Identities=8% Similarity=-0.078 Sum_probs=27.4
Q ss_pred EEEeeCCCCCCCccccCCCcEEEEEEeEEEEEEeCCCC
Q 021159 172 NLWIGNQLSETSFHKDHYENLYTVVSGQKHFLLLPPTD 209 (316)
Q Consensus 172 ~lwiG~~gs~t~~H~D~~~n~~~qv~G~Kr~~L~pP~~ 209 (316)
.+-|.+ |+..+.||....-++.+++|+=.+-++-|..
T Consensus 50 R~~i~p-ggl~lPh~~~A~ei~~V~qG~g~~G~v~p~~ 86 (496)
T 3ksc_A 50 RATLQR-NALRRPYYSNAPQEIFIQQGNGYFGMVFPGC 86 (496)
T ss_dssp EEEECT-TEEEEEEEESSCEEEEEEECCEEEEEECTTC
T ss_pred EEEecC-CCEeCceEcCCCEEEEEEeCceEEEEEeCCC
Confidence 444544 4667777765666889999999999998864
No 134
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=52.68 E-value=8.4 Score=34.15 Aligned_cols=23 Identities=22% Similarity=0.134 Sum_probs=19.6
Q ss_pred EEEEEcCCCEEeeC-cCcceeeecC
Q 021159 276 FECTVNAGEILYLL-IWFRKAVRNS 299 (316)
Q Consensus 276 ~~~~L~pGD~LfiP-gWwH~vv~~~ 299 (316)
-+.+|+|||++|+| +=.|. ..|.
T Consensus 108 ~~~~L~~GD~i~ip~~~~H~-~~N~ 131 (278)
T 1sq4_A 108 QVHAMQPGGYAFIPPGADYK-VRNT 131 (278)
T ss_dssp CEEEECTTEEEEECTTCCEE-EECC
T ss_pred EEEEECCCCEEEECCCCcEE-EEEC
Confidence 36789999999999 99999 5554
No 135
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=52.33 E-value=8.1 Score=33.69 Aligned_cols=23 Identities=17% Similarity=0.115 Sum_probs=19.6
Q ss_pred EEEEEcCCCEEeeC-cCcceeeecC
Q 021159 276 FECTVNAGEILYLL-IWFRKAVRNS 299 (316)
Q Consensus 276 ~~~~L~pGD~LfiP-gWwH~vv~~~ 299 (316)
-+.+|+|||++|+| +-.|. ..|.
T Consensus 99 ~~~~L~~Gd~~~~~~~~~H~-~~N~ 122 (261)
T 1rc6_A 99 KTFALSEGGYLYCPPGSLMT-FVNA 122 (261)
T ss_dssp EEEEEETTEEEEECTTCCCE-EEEC
T ss_pred EEEEECCCCEEEECCCCCEE-EEeC
Confidence 46789999999999 99999 5554
No 136
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=52.02 E-value=65 Score=26.99 Aligned_cols=35 Identities=11% Similarity=0.110 Sum_probs=24.6
Q ss_pred EEEeeCCCCCCCccccC-CCcEEEEEEeEEEEEEeC
Q 021159 172 NLWIGNQLSETSFHKDH-YENLYTVVSGQKHFLLLP 206 (316)
Q Consensus 172 ~lwiG~~gs~t~~H~D~-~~n~~~qv~G~Kr~~L~p 206 (316)
.+..=.+|..|+.|=.. ...++.+++|+=+-+.|.
T Consensus 73 ~ll~W~PGq~SpiHDH~~s~g~i~VL~G~l~e~~y~ 108 (200)
T 3eln_A 73 MILCWGEGHGSSIHDHTDSHCFLKLLQGNLKETLFD 108 (200)
T ss_dssp EEEEECTTCBCCEECCTTCEEEEEEEESCEEEEEEC
T ss_pred EEEEECCCCcCCCccCCCceEEEEEEeeeEEEEEee
Confidence 33334567889999765 356678899988777654
No 137
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=50.30 E-value=8.2 Score=35.45 Aligned_cols=23 Identities=4% Similarity=-0.102 Sum_probs=19.7
Q ss_pred EEEEEcCCCEEeeC-cCcceeeecC
Q 021159 276 FECTVNAGEILYLL-IWFRKAVRNS 299 (316)
Q Consensus 276 ~~~~L~pGD~LfiP-gWwH~vv~~~ 299 (316)
.+.+|+|||++||| +-.|. ..|.
T Consensus 94 ~~~~L~~GD~v~ip~g~~H~-~~n~ 117 (350)
T 1juh_A 94 QTRVLSSGDYGSVPRNVTHT-FQIQ 117 (350)
T ss_dssp EEEEEETTCEEEECTTEEEE-EEEC
T ss_pred EEEEECCCCEEEECCCCcEE-EEeC
Confidence 56789999999999 99999 5554
No 138
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=49.90 E-value=8.3 Score=33.64 Aligned_cols=18 Identities=22% Similarity=0.167 Sum_probs=15.5
Q ss_pred cEEEEEcCCCEEeeC-cCc
Q 021159 275 PFECTVNAGEILYLL-IWF 292 (316)
Q Consensus 275 ~~~~~L~pGD~LfiP-gWw 292 (316)
.-..+++|||+++|| ||-
T Consensus 204 G~~~~~~aGD~~~~P~G~~ 222 (238)
T 3myx_A 204 GSSLTVNTGDTVFVAQGAP 222 (238)
T ss_dssp SCEEEECTTCEEEECTTCE
T ss_pred CCEEEECCCCEEEECCCCE
Confidence 346889999999999 985
No 139
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=48.86 E-value=8.8 Score=33.43 Aligned_cols=24 Identities=8% Similarity=0.041 Sum_probs=20.2
Q ss_pred cEEEEEcCCCEEeeC-cCcceeeecC
Q 021159 275 PFECTVNAGEILYLL-IWFRKAVRNS 299 (316)
Q Consensus 275 ~~~~~L~pGD~LfiP-gWwH~vv~~~ 299 (316)
.-+..|+|||++|+| +=.|. ..|.
T Consensus 217 ~~~~~l~~GD~i~~~~~~~H~-~~n~ 241 (261)
T 1rc6_A 217 NNWIPVKKGDYIFMGAYSLQA-GYGV 241 (261)
T ss_dssp SCEEEEETTCEEEECSSEEEE-EEEC
T ss_pred CEEEEeCCCCEEEECCCCcEE-eEeC
Confidence 356799999999999 99999 5554
No 140
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=48.57 E-value=10 Score=33.37 Aligned_cols=23 Identities=17% Similarity=0.109 Sum_probs=19.6
Q ss_pred EEEEEcCCCEEeeC-cCcceeeecC
Q 021159 276 FECTVNAGEILYLL-IWFRKAVRNS 299 (316)
Q Consensus 276 ~~~~L~pGD~LfiP-gWwH~vv~~~ 299 (316)
-+.+|+|||++|+| +-.|. ..|.
T Consensus 102 ~~~~L~~GD~~~~~~~~~H~-~~N~ 125 (274)
T 1sef_A 102 ETHELEAGGYAYFTPEMKMY-LANA 125 (274)
T ss_dssp CEEEEETTEEEEECTTSCCE-EEES
T ss_pred EEEEECCCCEEEECCCCCEE-EEeC
Confidence 36789999999999 99999 5554
No 141
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=45.90 E-value=12 Score=32.48 Aligned_cols=23 Identities=13% Similarity=-0.052 Sum_probs=19.4
Q ss_pred EEEEEcCCCEEeeC-cCcceeeecC
Q 021159 276 FECTVNAGEILYLL-IWFRKAVRNS 299 (316)
Q Consensus 276 ~~~~L~pGD~LfiP-gWwH~vv~~~ 299 (316)
-+.+|+|||++|+| +=.|. ..|.
T Consensus 86 ~~~~l~~Gd~~~~p~~~~H~-~~n~ 109 (246)
T 1sfn_A 86 ETRTLREYDYVYLPAGEKHM-LTAK 109 (246)
T ss_dssp CEEEECTTEEEEECTTCCCE-EEEE
T ss_pred EEEEECCCCEEEECCCCCEE-EEeC
Confidence 35789999999999 99999 5554
No 142
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=45.02 E-value=12 Score=35.37 Aligned_cols=22 Identities=9% Similarity=0.132 Sum_probs=18.7
Q ss_pred EEEEEcCCCEEeeC-cCcceeee
Q 021159 276 FECTVNAGEILYLL-IWFRKAVR 297 (316)
Q Consensus 276 ~~~~L~pGD~LfiP-gWwH~vv~ 297 (316)
....|++||+++|| |.-|..++
T Consensus 86 ~~~~l~~GDv~~~P~G~~h~~~N 108 (418)
T 3s7i_A 86 KSFNLDEGHALRIPSGFISYILN 108 (418)
T ss_dssp EEEEEETTEEEEECTTCEEEEEE
T ss_pred EEEEecCCCEEEECCCCeEEEEe
Confidence 35689999999999 99999444
No 143
>2lkt_A Retinoic acid receptor responder protein 3; TIG3, human tumor suppressor II family, NLPC/P60, hydrolase; NMR {Homo sapiens}
Probab=43.60 E-value=9.8 Score=29.36 Aligned_cols=21 Identities=10% Similarity=0.189 Sum_probs=16.2
Q ss_pred EcCCCEEeeC--cCcceeeecCC
Q 021159 280 VNAGEILYLL--IWFRKAVRNSE 300 (316)
Q Consensus 280 L~pGD~LfiP--gWwH~vv~~~~ 300 (316)
.+|||.|+++ ++.|+.|-..+
T Consensus 8 p~pGDlI~~~r~~Y~H~gIYvGd 30 (125)
T 2lkt_A 8 PKPGDLIEIFRLGYEHWALYIGD 30 (125)
T ss_dssp CCTTCEEEEECSSSCEEEEEEET
T ss_pred CCCCCEEEEeCCCccEEEEEeCC
Confidence 4799999999 77788775443
No 144
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=42.45 E-value=15 Score=34.49 Aligned_cols=36 Identities=19% Similarity=0.140 Sum_probs=23.4
Q ss_pred eeEEEeeCCCCCCCccccCCCcEEEEEEeEEEEEEeC
Q 021159 170 AVNLWIGNQLSETSFHKDHYENLYTVVSGQKHFLLLP 206 (316)
Q Consensus 170 ~~~lwiG~~gs~t~~H~D~~~n~~~qv~G~Kr~~L~p 206 (316)
...+-+.+. +..+.|+-..+-++.+++|+=++.++.
T Consensus 54 ~~~~~l~pg-g~~~ph~~~a~ei~yVl~G~~~v~~v~ 89 (397)
T 2phl_A 54 LVEFRSKPE-TLLLPQQADAELLLVVRSGSAILVLVK 89 (397)
T ss_dssp EEEEEECSS-EEEEEEEESEEEEEEEEESEEEEEEEE
T ss_pred EEEEEECCC-cCccCEecCCCeEEEEEeeeEEEEEEe
Confidence 344555664 555666644556788999988877754
No 145
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=42.37 E-value=14 Score=32.14 Aligned_cols=35 Identities=9% Similarity=-0.010 Sum_probs=23.9
Q ss_pred cEEEEEcCCCEEeeC-cCcceeeecCCcchhhhcccC
Q 021159 275 PFECTVNAGEILYLL-IWFRKAVRNSEVNVVELMQAK 310 (316)
Q Consensus 275 ~~~~~L~pGD~LfiP-gWwH~vv~~~~~~v~~~~~~~ 310 (316)
.-.++++|||+++|| |.-|. -...+..-...+.+.
T Consensus 82 g~~~~~~~Gd~~~ip~G~~~~-w~~~~~~~~~y~~~~ 117 (238)
T 3myx_A 82 TDSVTLSTGESAVIGRGTQVR-IDAQPESLWAFCAST 117 (238)
T ss_dssp TEEEEEETTCEEEECTTCCEE-EEECTTEEEEEEEEC
T ss_pred CeEEEEcCCCEEEECCCCEEE-EEecCCeEEEEEecc
Confidence 467789999999999 99888 555444333333333
No 146
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=42.16 E-value=12 Score=32.47 Aligned_cols=25 Identities=16% Similarity=0.054 Sum_probs=20.3
Q ss_pred cEEEEEcCCCEEeeC-cCcceeeecCC
Q 021159 275 PFECTVNAGEILYLL-IWFRKAVRNSE 300 (316)
Q Consensus 275 ~~~~~L~pGD~LfiP-gWwH~vv~~~~ 300 (316)
.-...|+|||+||++ +=.|. ..|..
T Consensus 203 ~~~~~l~~GD~~~~~~~~pH~-~~n~g 228 (246)
T 1sfn_A 203 ENYYPVTAGDIIWMGAHCPQW-YGALG 228 (246)
T ss_dssp TEEEEEETTCEEEECTTCCEE-EEEES
T ss_pred CEEEEcCCCCEEEECCCCCEE-EEcCC
Confidence 456689999999999 99999 55543
No 147
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=41.11 E-value=19 Score=27.93 Aligned_cols=21 Identities=19% Similarity=0.083 Sum_probs=18.3
Q ss_pred EEEEEcCCCEEeeC-cCcceee
Q 021159 276 FECTVNAGEILYLL-IWFRKAV 296 (316)
Q Consensus 276 ~~~~L~pGD~LfiP-gWwH~vv 296 (316)
-+..++|||+++|| +=.|...
T Consensus 56 ~~~~l~~Gd~~~i~p~~~H~~~ 77 (164)
T 2arc_A 56 REFVCRPGDILLFPPGEIHHYG 77 (164)
T ss_dssp EEEEECTTCEEEECTTCCEEEE
T ss_pred EEEEecCCeEEEEcCCCCEEEE
Confidence 56789999999999 9999944
No 148
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=40.60 E-value=15 Score=32.14 Aligned_cols=24 Identities=13% Similarity=0.059 Sum_probs=19.7
Q ss_pred cEEEEEcCCCEEeeC-cCcceeeec
Q 021159 275 PFECTVNAGEILYLL-IWFRKAVRN 298 (316)
Q Consensus 275 ~~~~~L~pGD~LfiP-gWwH~vv~~ 298 (316)
.-+..|+|||+++|| +=.|...+.
T Consensus 220 ~~~~~l~~GD~i~i~~~~~H~~~n~ 244 (274)
T 1sef_A 220 NEWYPVEKGDYIFMSAYVPQAAYAV 244 (274)
T ss_dssp TEEEEEETTCEEEECTTCCEEEEEE
T ss_pred CEEEEECCCCEEEECCCCCEEEEeC
Confidence 356899999999999 999994443
No 149
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=37.75 E-value=20 Score=28.54 Aligned_cols=27 Identities=19% Similarity=0.372 Sum_probs=21.1
Q ss_pred CCCCCCccccC-CCcEEEEEEeEEEEEE
Q 021159 178 QLSETSFHKDH-YENLYTVVSGQKHFLL 204 (316)
Q Consensus 178 ~gs~t~~H~D~-~~n~~~qv~G~Kr~~L 204 (316)
+|+.-.+|... ..-+++.++|+=+++|
T Consensus 44 ~g~~RG~H~Hk~~~q~li~l~Gs~~v~l 71 (141)
T 2pa7_A 44 GEEPRGFHAHKKLEQVLVCLNGSCRVIL 71 (141)
T ss_dssp SSCCEEEEEESSCCEEEEEEESCEEEEE
T ss_pred CCCEECcCcCCCceEEEEEEccEEEEEE
Confidence 78888888763 4456788899888887
No 150
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=37.23 E-value=57 Score=28.36 Aligned_cols=84 Identities=13% Similarity=0.054 Sum_probs=49.5
Q ss_pred eeEEEeeCCCCCCCccccCC--CcEEEEEEeEEEEEEeCCCCCCCCcccccCCcccccccccCCcceeeeccCCcccccc
Q 021159 170 AVNLWIGNQLSETSFHKDHY--ENLYTVVSGQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELEEPVRYVPW 247 (316)
Q Consensus 170 ~~~lwiG~~gs~t~~H~D~~--~n~~~qv~G~Kr~~L~pP~~~~~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (316)
.-.+.|..+|..+|+|+.+. +-+.+--=|.=.+.|+.......+-.. .+.+
T Consensus 107 aeK~Li~~~gQ~~P~H~H~~K~EdiinRgGG~L~v~Ly~~~~~~~~~~~----------------~v~V----------- 159 (246)
T 3kmh_A 107 AEKIMHVRDAQVTPMHFHWRKREDIINRGGGNLIVELWNADSNEQTADS----------------DITV----------- 159 (246)
T ss_dssp EEEEEEECBTCEEEEEEESSCCEEEEEEEESCEEEEEEEBCTTSSBCCS----------------CEEE-----------
T ss_pred eeeEeeccCCCCCCcccCCCccccEEecCCCeEEEEEEecCCCccccCC----------------CeEE-----------
Confidence 44677777788889998853 445555445556666655443221100 0111
Q ss_pred cccCCCCCccccccccccCCCccCCCccEEEEEcCCCEEeeC-cCcceee
Q 021159 248 CSVNPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLL-IWFRKAV 296 (316)
Q Consensus 248 s~vd~~~~~~~~~pd~~~fP~~~~~~~~~~~~L~pGD~LfiP-gWwH~vv 296 (316)
.+|- ....+ ...-+++|.||+-+=|| +-||.--
T Consensus 160 -~~DG---------~~~~~------~aG~~i~L~PGESiTl~Pg~~H~F~ 193 (246)
T 3kmh_A 160 -VIDG---------CRQKH------TAGSQLRLSPGESICLPPGLYHSFW 193 (246)
T ss_dssp -EETT---------EEEEE------CTTCEEEECTTCEEEECTTEEEEEE
T ss_pred -ecCC---------eEEEe------CCCCEEEECCCCeEecCCCCEEEEE
Confidence 1121 01222 45678999999999999 9999833
No 151
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=33.11 E-value=24 Score=31.12 Aligned_cols=25 Identities=16% Similarity=0.191 Sum_probs=21.0
Q ss_pred ccEEEEEcCCCEEeeC-cCcceeeecC
Q 021159 274 KPFECTVNAGEILYLL-IWFRKAVRNS 299 (316)
Q Consensus 274 ~~~~~~L~pGD~LfiP-gWwH~vv~~~ 299 (316)
..-...|+|||+||++ +=.|. ..|.
T Consensus 228 ~~~~~~v~~GD~~~~~~~~~h~-~~n~ 253 (278)
T 1sq4_A 228 NQDWVEVEAGDFMWLRAFCPQA-CYSG 253 (278)
T ss_dssp TTEEEEEETTCEEEEEESCCEE-EECC
T ss_pred CCEEEEeCCCCEEEECCCCCEE-EEcC
Confidence 3567899999999999 99999 5554
No 152
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=32.93 E-value=18 Score=35.07 Aligned_cols=39 Identities=13% Similarity=0.034 Sum_probs=29.1
Q ss_pred eeEEEeeCCCCCCCccccCCCcEEEEEEeEEEEEEeCCCC
Q 021159 170 AVNLWIGNQLSETSFHKDHYENLYTVVSGQKHFLLLPPTD 209 (316)
Q Consensus 170 ~~~lwiG~~gs~t~~H~D~~~n~~~qv~G~Kr~~L~pP~~ 209 (316)
...+-|.+. +....||-...-++.++.|+=.+.+.-|..
T Consensus 50 ~~r~~i~p~-gl~lPh~~~a~~~~yV~~G~g~~g~v~pg~ 88 (510)
T 3c3v_A 50 LSRLVLRRN-ALRRPFYSNAPQEIFIQQGRGYFGLIFPGC 88 (510)
T ss_dssp EEEEEECTT-EEEEEEECSSCEEEEEEECCEEEEEECTTC
T ss_pred EEEEEECCC-CCccceecCCCeEEEEEeCEEEEEEEeCCC
Confidence 344555555 666777766677899999999999998863
No 153
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=31.31 E-value=20 Score=31.65 Aligned_cols=24 Identities=13% Similarity=0.148 Sum_probs=20.1
Q ss_pred EEEEcCCCEEeeC-cCcceeeecCCc
Q 021159 277 ECTVNAGEILYLL-IWFRKAVRNSEV 301 (316)
Q Consensus 277 ~~~L~pGD~LfiP-gWwH~vv~~~~~ 301 (316)
+.+|++||.+|+| +=-|+ ..|...
T Consensus 110 ~~~L~~Gds~y~p~~~~H~-~~N~~~ 134 (266)
T 4e2q_A 110 SKKLTVDSYAYLPPNFHHS-LDCVES 134 (266)
T ss_dssp CEEECTTEEEEECTTCCCE-EEESSC
T ss_pred EEEEcCCCEEEECCCCCEE-EEeCCC
Confidence 4689999999999 99999 666543
No 154
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=27.65 E-value=33 Score=26.51 Aligned_cols=30 Identities=10% Similarity=0.197 Sum_probs=23.1
Q ss_pred EEEEEcCCCEEeeC-cCcceeeecCCcchhh
Q 021159 276 FECTVNAGEILYLL-IWFRKAVRNSEVNVVE 305 (316)
Q Consensus 276 ~~~~L~pGD~LfiP-gWwH~vv~~~~~~v~~ 305 (316)
-++.+.+|+.-+|| .-||.|+-+.|..+-+
T Consensus 64 ~~~~~~~~~~~~i~Pq~wHrVe~sdD~~f~l 94 (119)
T 3dl3_A 64 IKVVINAGQFATSPPQYWHRIELSDDAQFNI 94 (119)
T ss_dssp EEEEEETTEEEEECTTCEEEEEECTTCEEEE
T ss_pred EEEEeCCCCCceeCCCceEEEEECCCeEEEE
Confidence 56789999999999 9999977554544433
No 155
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=26.71 E-value=31 Score=26.98 Aligned_cols=26 Identities=8% Similarity=0.041 Sum_probs=20.7
Q ss_pred cEEEEEcCCCEEeeC-cCcceeeecCC
Q 021159 275 PFECTVNAGEILYLL-IWFRKAVRNSE 300 (316)
Q Consensus 275 ~~~~~L~pGD~LfiP-gWwH~vv~~~~ 300 (316)
.-+..+.+|+..+|| +-||.|+-.++
T Consensus 64 ~~~~l~~~~~~~~i~Pq~wH~Ve~lsd 90 (127)
T 3bb6_A 64 DQVILIEAGQFAVFPPEKWHNIEAMTD 90 (127)
T ss_dssp SEEEEEEBTBEEECCSSCEEEEEESST
T ss_pred eEEEEeCCCCceEECCCCcEEEEEcCC
Confidence 356788899999999 99999654444
No 156
>3rco_A Tudor domain-containing protein 7; structural genomics, structural genomics consortium, SGC, HL DNA binding protein; 1.80A {Homo sapiens} PDB: 2lh9_A
Probab=24.07 E-value=48 Score=24.20 Aligned_cols=14 Identities=21% Similarity=0.162 Sum_probs=7.0
Q ss_pred ChHHHHHHHHhhhh
Q 021159 1 MQEVKKLWDEVREL 14 (316)
Q Consensus 1 ~~~~~~~~~~~~~~ 14 (316)
|+|.+.+-...|-|
T Consensus 8 m~~~e~V~k~iRsl 21 (89)
T 3rco_A 8 MLEGDLVSKMLRAV 21 (89)
T ss_dssp CCHHHHHHHHHHHH
T ss_pred eccHHHHHHHHHHH
Confidence 44445555555555
No 157
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=22.96 E-value=54 Score=27.77 Aligned_cols=26 Identities=4% Similarity=0.195 Sum_probs=20.9
Q ss_pred ccEEEEEcCCCEEeeC----cCcceeeecCC
Q 021159 274 KPFECTVNAGEILYLL----IWFRKAVRNSE 300 (316)
Q Consensus 274 ~~~~~~L~pGD~LfiP----gWwH~vv~~~~ 300 (316)
....+.|.+||+|.++ .|+|. |....
T Consensus 154 ~~~~i~L~~GsllvM~G~~r~~~H~-I~~~~ 183 (211)
T 3i3q_A 154 PLKRLLLEHGDVVVWGGESRLFYHG-IQPLK 183 (211)
T ss_dssp CCEEEEECTTCEEEECGGGTTCCEE-ECCCC
T ss_pred ceEEEECCCCCEEEECchHHceEec-cCccc
Confidence 4578999999999999 48899 55443
No 158
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=22.85 E-value=50 Score=29.08 Aligned_cols=24 Identities=13% Similarity=0.104 Sum_probs=19.9
Q ss_pred EEEEEcCCCEEeeC-cCcceeeecCC
Q 021159 276 FECTVNAGEILYLL-IWFRKAVRNSE 300 (316)
Q Consensus 276 ~~~~L~pGD~LfiP-gWwH~vv~~~~ 300 (316)
-...+++||++||| +=.|. ..+.+
T Consensus 225 ~~~~V~~GD~i~~~~~~~h~-~~n~G 249 (266)
T 4e2q_A 225 NWYPVQAGDVIWMAPFVPQW-YAALG 249 (266)
T ss_dssp EEEEEETTCEEEECTTCCEE-EEEES
T ss_pred EEEEecCCCEEEECCCCcEE-EEeCC
Confidence 46789999999999 99999 55543
No 159
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=21.89 E-value=1.6e+02 Score=24.65 Aligned_cols=24 Identities=13% Similarity=0.068 Sum_probs=19.9
Q ss_pred EEEEEcCCCEEeeC-cCcceeeecC
Q 021159 276 FECTVNAGEILYLL-IWFRKAVRNS 299 (316)
Q Consensus 276 ~~~~L~pGD~LfiP-gWwH~vv~~~ 299 (316)
..+.-++|++|++| .-+|.|..+.
T Consensus 169 ~~i~P~~G~lvlFpS~l~H~V~p~~ 193 (216)
T 2rg4_A 169 RSVAPKVGDVLLWESWLRHEVPMNM 193 (216)
T ss_dssp EEECCCTTEEEEEETTSCEEECCCC
T ss_pred eEecCCCCeEEEECCCCEEeccCCC
Confidence 47778999999999 9999966643
No 160
>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A {Saccharomyces cerevisiae} PDB: 1yp5_A
Probab=21.72 E-value=21 Score=22.93 Aligned_cols=19 Identities=21% Similarity=0.504 Sum_probs=14.6
Q ss_pred EEEEEcCCCEEee----C-cCcce
Q 021159 276 FECTVNAGEILYL----L-IWFRK 294 (316)
Q Consensus 276 ~~~~L~pGD~Lfi----P-gWwH~ 294 (316)
-+..+++||+|.| . +||.-
T Consensus 16 ~eLs~~~Gd~i~v~~~~~~gW~~g 39 (58)
T 1zuy_A 16 SELPLKKGDVIYITREEPSGWSLG 39 (58)
T ss_dssp TBCCBCTTCEEEEEEECTTSEEEE
T ss_pred CcCCCCCCCEEEEEEecCCCeEEE
Confidence 3456788999888 6 89976
No 161
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=21.14 E-value=43 Score=32.63 Aligned_cols=39 Identities=10% Similarity=-0.055 Sum_probs=29.7
Q ss_pred eEEEeeCCCCCCCccccCCCcEEEEEEeEEEEEEeCCCCC
Q 021159 171 VNLWIGNQLSETSFHKDHYENLYTVVSGQKHFLLLPPTDV 210 (316)
Q Consensus 171 ~~lwiG~~gs~t~~H~D~~~n~~~qv~G~Kr~~L~pP~~~ 210 (316)
..+-|.+. ...+.||.+..-++.+|.|+=.+-++-|...
T Consensus 51 ~R~~i~p~-Gl~lPh~~~a~el~yV~qG~g~~G~v~Pgcp 89 (531)
T 3fz3_A 51 SRITIQRN-GLHLPSYSNAPQLIYIVQGRGVLGAVFSGCP 89 (531)
T ss_dssp EEEEECTT-EEEEEEEESSCEEEEEEECEEEEEECCTTCC
T ss_pred EEEEecCC-CEeCCccCCCCeEEEEEECcEEEEEEcCCCc
Confidence 34555654 5677888777778999999999988888764
No 162
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=20.70 E-value=28 Score=27.36 Aligned_cols=18 Identities=17% Similarity=-0.273 Sum_probs=16.5
Q ss_pred EEEEcCCCEEeeC-cCcce
Q 021159 277 ECTVNAGEILYLL-IWFRK 294 (316)
Q Consensus 277 ~~~L~pGD~LfiP-gWwH~ 294 (316)
..++++||.+|+| +=-|.
T Consensus 85 ~~~~~~Gd~~~~p~g~~H~ 103 (145)
T 2o1q_A 85 GDTAIAPGYGYESANARHD 103 (145)
T ss_dssp SEEEESSEEEEECTTCEES
T ss_pred ceEeCCCEEEEECcCCccC
Confidence 3688999999999 99999
No 163
>1ujx_A Polynucleotide kinase 3'-phosphatase; DNA repair, FHA domain, beta-sandwich, antiparallel beta-sheets, phosphopeptide binding motif; NMR {Mus musculus} SCOP: b.26.1.2
Probab=20.43 E-value=66 Score=24.77 Aligned_cols=26 Identities=12% Similarity=0.264 Sum_probs=19.7
Q ss_pred CccEEEEEcCCCEEe-eC-cCcceeeec
Q 021159 273 PKPFECTVNAGEILY-LL-IWFRKAVRN 298 (316)
Q Consensus 273 ~~~~~~~L~pGD~Lf-iP-gWwH~vv~~ 298 (316)
.+..++.|++||.|+ +| ..+..|+-.
T Consensus 87 ~k~~~~~L~~GD~l~Ll~g~y~~~v~f~ 114 (119)
T 1ujx_A 87 KPGLSGSLSLGDVLYLVNGLYPLTLRWS 114 (119)
T ss_dssp CTTCEEEEETTCCCBCBTTBSCCEEEEC
T ss_pred cCCCEEEecCCCEEEEecCCeEEEEEec
Confidence 567899999999998 46 666664443
Done!