BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021160
(316 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5R448|DCAF8_PONAB DDB1- and CUL4-associated factor 8 OS=Pongo abelii GN=DCAF8 PE=2
SV=1
Length = 597
Score = 176 bits (447), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/256 (40%), Positives = 152/256 (59%), Gaps = 36/256 (14%)
Query: 2 VLFNMLFDLRSDS-ATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYAR 60
V+F + DLR D A++L +K+ + L I ++P N + FAVGG D++ R
Sbjct: 307 VVFTI--DLRQDRPASKLVV-------TKEKEKKVGLYTIYVNPANTHQFAVGGRDQFVR 357
Query: 61 VYDIRKCHWYSPISSDTPVDTFCPRHLI-GKNNIHITGLAYS-NTSELLISYNDELVYLF 118
+YD RK ++ + FCP HL+ G++ +IT L YS + +ELL SYNDE +YLF
Sbjct: 358 IYDQRK---IDENENNGVLKKFCPHHLVNGESKANITCLVYSHDGTELLASYNDEDIYLF 414
Query: 119 EKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFI 178
+ G + KR Y GHRN+ TVKGVNF+GP E+V+SGSDCGH+F+
Sbjct: 415 NSSHSDGAQYV--------KR-----YKGHRNNATVKGVNFYGPKSEFVVSGSDCGHIFL 461
Query: 179 WKKKGGKLVRLMVGDR-HVVNQLEPHPHIPMFATCGIEKTVKLWAPMP---TDFPPLPDN 234
W+K ++++ M GD+ VVN LEPHPH+P+ AT G++ VK+WAP T+ L D
Sbjct: 462 WEKSSCQIIQFMEGDKGGVVNCLEPHPHLPVLATSGLDHDVKIWAPTAEASTELTGLKD- 520
Query: 235 AEKIMKANKQGREDHS 250
++K NK+ R++ S
Sbjct: 521 ---VIKKNKRERDEDS 533
>sp|Q8N7N5|DCAF8_MOUSE DDB1- and CUL4-associated factor 8 OS=Mus musculus GN=Dcaf8 PE=1
SV=1
Length = 591
Score = 175 bits (444), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 102/253 (40%), Positives = 150/253 (59%), Gaps = 30/253 (11%)
Query: 2 VLFNMLFDLRSDS-ATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYAR 60
V+F + DLR D A++L +K+ + L I ++P N + FAVGG D+Y R
Sbjct: 301 VVFTI--DLRQDRPASKLVV-------TKEKEKKVGLYTIYVNPANTHQFAVGGRDQYVR 351
Query: 61 VYDIRKCHWYSPISSDTPVDTFCPRHLI-GKNNIHITGLAYS-NTSELLISYNDELVYLF 118
+YD RK ++ + FCP HL+ ++ +IT L YS + +ELL SYNDE +YLF
Sbjct: 352 IYDQRK---IDENENNGVLKKFCPHHLVNSESKANITCLVYSHDGTELLASYNDEDIYLF 408
Query: 119 EKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFI 178
+ G + KR Y GHRN+ TVKGVNF+GP E+V+SGSDCGH+F+
Sbjct: 409 NSSHSDGAQYI--------KR-----YKGHRNNATVKGVNFYGPKSEFVVSGSDCGHIFL 455
Query: 179 WKKKGGKLVRLMVGDR-HVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEK 237
W+K ++++ M GD+ VVN LEPHPH+P+ AT G++ VK+WAP L ++
Sbjct: 456 WEKSSCQIIQFMEGDKGGVVNCLEPHPHLPVLATSGLDHDVKIWAPTAEASTELT-GLKE 514
Query: 238 IMKANKQGREDHS 250
++K NK+ R++ S
Sbjct: 515 VIKKNKRERDEDS 527
>sp|Q6NRH1|DCAF8_XENLA DDB1- and CUL4-associated factor 8 OS=Xenopus laevis GN=dcaf8 PE=2
SV=1
Length = 601
Score = 175 bits (444), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 103/253 (40%), Positives = 150/253 (59%), Gaps = 30/253 (11%)
Query: 2 VLFNMLFDLRSDS-ATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYAR 60
V+F + DLR D A+RL +K+ + + L I ++P N FAVGG D++ R
Sbjct: 310 VVFTI--DLRQDRPASRLVV-------TKEKESKVGLYTIYVNPANTYQFAVGGRDQFVR 360
Query: 61 VYDIRKCHWYSPISSDTPVDTFCPRHLI-GKNNIHITGLAYS-NTSELLISYNDELVYLF 118
+YD RK + ++ + FCP HL+ + +IT L YS + SELL SYNDE +YLF
Sbjct: 361 IYDQRK---INENVNNGVLKKFCPHHLVTSEAKANITCLVYSHDGSELLASYNDEDIYLF 417
Query: 119 EKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFI 178
+ G E + Y GHRN+ TVKGVNF+GP E+V+SGSDCGH+F+
Sbjct: 418 NSSHSDGA-------------EYIKRYKGHRNNATVKGVNFYGPRSEFVVSGSDCGHIFL 464
Query: 179 WKKKGGKLVRLMVGDR-HVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEK 237
W+K ++V+ M GD+ VVN LEPHPH+P+ AT G++ VK+W P + P D ++
Sbjct: 465 WEKSSCQIVQFMDGDKGGVVNCLEPHPHLPVLATSGLDYDVKIWLPTAKE-PTELDGLKE 523
Query: 238 IMKANKQGREDHS 250
++K NK+ R++ S
Sbjct: 524 VIKKNKRERDEDS 536
>sp|Q5TAQ9|DCAF8_HUMAN DDB1- and CUL4-associated factor 8 OS=Homo sapiens GN=DCAF8 PE=1
SV=1
Length = 597
Score = 174 bits (441), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 103/256 (40%), Positives = 151/256 (58%), Gaps = 36/256 (14%)
Query: 2 VLFNMLFDLRSDS-ATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYAR 60
V+F + DLR D A++L +K+ + L I ++P N + FAVGG D++ R
Sbjct: 307 VVFTI--DLRQDRPASKLVV-------TKEKEKKVGLYTIYVNPANTHQFAVGGRDQFVR 357
Query: 61 VYDIRKCHWYSPISSDTPVDTFCPRHLI-GKNNIHITGLAYS-NTSELLISYNDELVYLF 118
+YD RK ++ + FCP HL+ ++ +IT L YS + +ELL SYNDE +YLF
Sbjct: 358 IYDQRK---IDENENNGVLKKFCPHHLVNSESKANITCLVYSHDGTELLASYNDEDIYLF 414
Query: 119 EKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFI 178
+ G + KR Y GHRN+ TVKGVNF+GP E+V+SGSDCGH+F+
Sbjct: 415 NSSHSDGAQYV--------KR-----YKGHRNNATVKGVNFYGPKSEFVVSGSDCGHIFL 461
Query: 179 WKKKGGKLVRLMVGDR-HVVNQLEPHPHIPMFATCGIEKTVKLWAPMP---TDFPPLPDN 234
W+K ++++ M GD+ VVN LEPHPH+P+ AT G++ VK+WAP T+ L D
Sbjct: 462 WEKSSCQIIQFMEGDKGGVVNCLEPHPHLPVLATSGLDHDVKIWAPTAEASTELTGLKD- 520
Query: 235 AEKIMKANKQGREDHS 250
++K NK+ R++ S
Sbjct: 521 ---VIKKNKRERDEDS 533
>sp|Q5U2M6|DCAF8_RAT DDB1- and CUL4-associated factor 8 OS=Rattus norvegicus GN=Dcaf8
PE=2 SV=1
Length = 591
Score = 174 bits (440), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/256 (40%), Positives = 151/256 (58%), Gaps = 36/256 (14%)
Query: 2 VLFNMLFDLRSDS-ATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYAR 60
V+F + DLR D A++L +K+ + L I ++P N + FAVGG D++ R
Sbjct: 301 VVFTI--DLRQDRPASKLVV-------TKEKEKKVGLYTIYVNPANTHQFAVGGRDQFVR 351
Query: 61 VYDIRKCHWYSPISSDTPVDTFCPRHLI-GKNNIHITGLAYS-NTSELLISYNDELVYLF 118
+YD RK ++ + FCP HL+ ++ +IT L YS + +ELL SYNDE +YLF
Sbjct: 352 IYDQRK---IDENENNGVLKKFCPHHLVNSESKANITCLVYSHDGTELLASYNDEDIYLF 408
Query: 119 EKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFI 178
+ G + KR Y GHRN+ TVKGVNF+GP E+V+SGSDCGH+F+
Sbjct: 409 NSSHSDGAQYI--------KR-----YKGHRNNATVKGVNFYGPKSEFVVSGSDCGHIFL 455
Query: 179 WKKKGGKLVRLMVGDR-HVVNQLEPHPHIPMFATCGIEKTVKLWAPMP---TDFPPLPDN 234
W+K ++++ M GD+ VVN LEPHPH+P+ AT G++ VK+WAP T+ L D
Sbjct: 456 WEKSSCQIIQFMEGDKGGVVNCLEPHPHLPVLATSGLDHDVKIWAPTAEASTELTGLKD- 514
Query: 235 AEKIMKANKQGREDHS 250
++K NK+ R++ S
Sbjct: 515 ---VIKKNKRERDEDS 527
>sp|Q28I90|DCAF8_XENTR DDB1- and CUL4-associated factor 8 OS=Xenopus tropicalis GN=dcaf8
PE=2 SV=1
Length = 604
Score = 173 bits (439), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/253 (40%), Positives = 149/253 (58%), Gaps = 30/253 (11%)
Query: 2 VLFNMLFDLRSDS-ATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYAR 60
V+F + DLR D A+RL +K+ + L I ++P N FAVGG D++ R
Sbjct: 313 VVFTI--DLRQDRPASRLVV-------TKEKEKKVGLYTIYVNPANTYQFAVGGRDQFVR 363
Query: 61 VYDIRKCHWYSPISSDTPVDTFCPRHLI-GKNNIHITGLAYS-NTSELLISYNDELVYLF 118
+YD RK + ++ + FCP HL+ + +IT L YS + SELL SYNDE +YLF
Sbjct: 364 IYDQRK---INENVNNGVLKKFCPHHLVTSEAKANITCLVYSHDGSELLASYNDEDIYLF 420
Query: 119 EKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFI 178
+ G E + Y GHRN+ TVKGVNF+GP E+V+SGSDCGH+F+
Sbjct: 421 NSSHSDGA-------------EYIKRYKGHRNNATVKGVNFYGPRSEFVVSGSDCGHIFL 467
Query: 179 WKKKGGKLVRLMVGDR-HVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEK 237
W+K ++V+ M GD+ VVN LEPHPH+P+ AT G++ VK+W P + P + ++
Sbjct: 468 WEKSSCQIVQFMDGDKGGVVNCLEPHPHLPVLATSGLDYDVKIWLPTAKE-PTELNGLKE 526
Query: 238 IMKANKQGREDHS 250
++K NK+ R++ S
Sbjct: 527 VIKKNKRERDEDS 539
>sp|A6NGE4|DC8L1_HUMAN DDB1- and CUL4-associated factor 8-like protein 1 OS=Homo sapiens
GN=DCAF8L1 PE=2 SV=1
Length = 600
Score = 157 bits (397), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/299 (35%), Positives = 161/299 (53%), Gaps = 44/299 (14%)
Query: 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARV 61
V+F + DLR D + EN K+ + L I ++P N FAVGG D++ R+
Sbjct: 310 VVFTI--DLRQDRPASKVVVTR--ENDKK----VGLYTISMNPANIYQFAVGGHDQFVRI 361
Query: 62 YDIRKCHWYSPISSDTPVDTFCPRHLIGKN-NIHITGLAYS-NTSELLISYNDELVYLFE 119
YD R+ ++ + F P HL+ + +IT + YS + +ELL SYNDE +YLF
Sbjct: 362 YDQRRI---DKKENNGVLKKFTPHHLVYCDFPTNITCVVYSHDGTELLASYNDEDIYLFN 418
Query: 120 KNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIW 179
++ G + KR Y GHRN+ T+K VNF+GP E+V+SGSDCGH+F W
Sbjct: 419 SSLSDGAQYV--------KR-----YKGHRNNDTIKCVNFYGPRSEFVVSGSDCGHVFFW 465
Query: 180 KKKGGKLVRLMVGDR-HVVNQLEPHPHIPMFATCGIEKTVKLWAP---MPTDFPPLPDNA 235
+K ++++ M GDR +VN LEPHP++P+ AT G+++ V++W P T+ L D
Sbjct: 466 EKSSSQIIQFMEGDRGDIVNCLEPHPYLPVLATSGLDQHVRIWTPTAKTATELTGLKD-- 523
Query: 236 EKIMKANKQGREDHSRITLTPDVIMHVLR------LQRRQTLAYRERRYNAADFESDEE 288
++K NKQ R D + T +LR LQR +R+ + A+F +EE
Sbjct: 524 --VIKKNKQER-DEDNLNYTDSFDNRMLRFFVRHLLQRAHQPGWRD---HGAEFPDEEE 576
>sp|P0C7V8|DC8L2_HUMAN DDB1- and CUL4-associated factor 8-like protein 2 OS=Homo sapiens
GN=DCAF8L2 PE=2 SV=1
Length = 602
Score = 151 bits (382), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 92/252 (36%), Positives = 138/252 (54%), Gaps = 28/252 (11%)
Query: 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARV 61
V+F + DLR D + EN K+ + L I ++P N FAVGG D++ R+
Sbjct: 313 VVFTI--DLRQDRPASKVVVTR--ENDKK----VGLYTITVNPANTYQFAVGGQDQFVRI 364
Query: 62 YDIRKCHWYSPISSDTPVDTFCPRHLIGKN-NIHITGLAYS-NTSELLISYNDELVYLFE 119
YD RK ++ + F P HL+ + +IT + YS + +ELL SYND+ +YLF
Sbjct: 365 YDQRKI---DKKENNGVLKKFTPHHLVNCDFPTNITCVVYSHDGTELLASYNDDDIYLFN 421
Query: 120 KNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIW 179
+ G KR + GHRN+ TVKGVNF+GP E+V+SGSDCGH+F W
Sbjct: 422 SSHSDGAQ--------YSKR-----FKGHRNNTTVKGVNFYGPRSEFVVSGSDCGHIFFW 468
Query: 180 KKKGGKLVRLMVGDRH-VVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKI 238
+K ++++ + G R +N LEPHP++P+ A G++ VK+W P L +K+
Sbjct: 469 EKSSCQIIQFLKGSREGTINCLEPHPYLPVLACSGLDHDVKIWTPTAKAATELT-GLKKV 527
Query: 239 MKANKQGREDHS 250
+K NK R++ S
Sbjct: 528 IKKNKWERDEDS 539
>sp|Q5R9B8|DCAF6_PONAB DDB1- and CUL4-associated factor 6 OS=Pongo abelii GN=DCAF6 PE=2
SV=2
Length = 860
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 59/82 (71%), Gaps = 3/82 (3%)
Query: 144 VYSGHRNSQT-VKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEP 202
VY GHRNS+T +K NF+G N +VMSGSDCGH+FIW + + + L+ D HVVN L+P
Sbjct: 712 VYKGHRNSRTMIKEANFWGAN--FVMSGSDCGHIFIWDRHTAEHLMLLEADNHVVNCLQP 769
Query: 203 HPHIPMFATCGIEKTVKLWAPM 224
HP P+ A+ GI+ +K+W+P+
Sbjct: 770 HPFDPILASSGIDYDIKIWSPL 791
Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 39 AIVIDPRNPNYFAVGGSDEYARVYD-----IRKCHWYSPISSDTPVDTFCPRHLIGKNNI 93
++ I P P Y AVG SD R+YD R Y+ + V F P HL K +
Sbjct: 196 SVAICPPIPYYLAVGCSDSSVRIYDRRMLGTRATGNYAGRGTTGMVARFIPSHLNNK-SC 254
Query: 94 HITGLAYS-NTSELLISYNDELVYLFE 119
+T L YS + E+L+SY+ + +YLF+
Sbjct: 255 RVTSLCYSEDGQEILVSYSSDYIYLFD 281
>sp|Q9DC22|DCAF6_MOUSE DDB1- and CUL4-associated factor 6 OS=Mus musculus GN=Dcaf6 PE=1
SV=1
Length = 876
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 59/82 (71%), Gaps = 3/82 (3%)
Query: 144 VYSGHRNSQT-VKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEP 202
VY GHRNS+T +K NF+G N +VMSGSDCGH+FIW + + + L+ D HVVN L+P
Sbjct: 728 VYKGHRNSRTMIKEANFWGAN--FVMSGSDCGHIFIWDRHTAEHLMLLEADNHVVNCLQP 785
Query: 203 HPHIPMFATCGIEKTVKLWAPM 224
HP P+ A+ GI+ +K+W+P+
Sbjct: 786 HPFDPILASSGIDYDIKIWSPL 807
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 39 AIVIDPRNPNYFAVGGSDEYARVYD-----IRKCHWYSPISSDTPVDTFCPRHLIGKNNI 93
++ I P P Y AVG SD R+YD R Y+ + V F P HL K +
Sbjct: 196 SVAICPPVPYYLAVGCSDSSVRIYDRRMLGTRATGNYAGRGTTGMVARFIPSHLSNK-SC 254
Query: 94 HITGLAYS-NTSELLISYNDELVYLFE 119
+T L YS + E+L+SY+ + +YLF+
Sbjct: 255 RVTSLCYSEDGQEILVSYSSDYIYLFD 281
>sp|Q58WW2|DCAF6_HUMAN DDB1- and CUL4-associated factor 6 OS=Homo sapiens GN=DCAF6 PE=1
SV=1
Length = 860
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 59/82 (71%), Gaps = 3/82 (3%)
Query: 144 VYSGHRNSQT-VKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEP 202
VY GHRNS+T +K NF+G N +VMSGSDCGH+FIW + + + L+ D HVVN L+P
Sbjct: 712 VYKGHRNSRTMIKEANFWGAN--FVMSGSDCGHIFIWDRHTAEHLMLLEADNHVVNCLQP 769
Query: 203 HPHIPMFATCGIEKTVKLWAPM 224
HP P+ A+ GI+ +K+W+P+
Sbjct: 770 HPFDPILASSGIDYDIKIWSPL 791
Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 39 AIVIDPRNPNYFAVGGSDEYARVYD-----IRKCHWYSPISSDTPVDTFCPRHLIGKNNI 93
++ I P P Y AVG SD R+YD R Y+ + V F P HL K +
Sbjct: 196 SVAICPPIPYYLAVGCSDSSVRIYDRRMLGTRATGNYAGRGTTGMVARFIPSHLNNK-SC 254
Query: 94 HITGLAYS-NTSELLISYNDELVYLFE 119
+T L YS + E+L+SY+ + +YLF+
Sbjct: 255 RVTSLCYSEDGQEILVSYSSDYIYLFD 281
>sp|O94527|IQW1_SCHPO WD repeat protein iqw1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=iqw1 PE=1 SV=1
Length = 809
Score = 95.1 bits (235), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 83/153 (54%), Gaps = 18/153 (11%)
Query: 125 GPSPLSLSPEDLQKREEPQV--------YSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHL 176
GP+ LSL + +K EP V Y GH N +++K VNF+G NDEYVMSGSD G
Sbjct: 637 GPTLLSLRMKK-RKAVEPNVPVNTHVKSYYGHCNVESIKNVNFYGQNDEYVMSGSDDGRF 695
Query: 177 FIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPL----- 231
FIW K ++ ++ GD VN +E HP P A GI+ TVK++ T PP
Sbjct: 696 FIWDKLNASILAIIHGDSEAVNVIEGHPRCPTLAVSGIDSTVKIFNTENT--PPSGCSRN 753
Query: 232 -PDNAEKIMKANKQGREDHSRIT-LTPDVIMHV 262
N+ KI+ N+ R+ SR + +T ++ H+
Sbjct: 754 HTSNSYKIIATNEMNRQQGSRDSYITSRMLSHL 786
Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 53/119 (44%), Gaps = 14/119 (11%)
Query: 35 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCH------W---YSPISSDTPVDTFCPR 85
I L I + P NP YFA+GG+ YA +YD R W SP V F P
Sbjct: 196 INLYTITMSPSNPYYFAIGGTHPYAFLYDRRMVKKSFRDDWTMNTSPEKDCRCVRKFSPD 255
Query: 86 HLIGKNNI---HITGLAYS--NTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKR 139
I +IT +S N +ELL+S+N + VYLF + +P ED K+
Sbjct: 256 GSCNSQGILDRYITCCQFSAANPNELLVSWNSDYVYLFHVHEDKSYTPTFNKIEDSNKK 314
>sp|Q80ZK9|WDTC1_MOUSE WD and tetratricopeptide repeats protein 1 OS=Mus musculus GN=Wdtc1
PE=1 SV=1
Length = 677
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Query: 145 YSGHRNSQT-VKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPH 203
Y GH N+ T +K NFFG N +Y++SGSD G FIW+K+ LVR++ GD +VN L+PH
Sbjct: 530 YCGHCNTTTDIKEANFFGSNAQYIVSGSDDGSFFIWEKETTNLVRVLQGDESIVNCLQPH 589
Query: 204 PHIPMFATCGIEKTVKLWAPMP 225
P AT GI+ V+LW P P
Sbjct: 590 PSYCFLATSGIDPVVRLWNPRP 611
Score = 40.4 bits (93), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 27/112 (24%)
Query: 35 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTP---VDTFCPRHL---I 88
+ + ++P++ N AVG S + R+YDIR H + +P V TFC R
Sbjct: 185 VEAKCLTVNPQDNNCLAVGASGPFVRLYDIRMIHNHRKSMRQSPSAGVHTFCDRQKPLPD 244
Query: 89 GKNNIHITG--------------------LAYS-NTSELLISYNDELVYLFE 119
G ++ G + +S N +ELL++ E VYLF+
Sbjct: 245 GAAQYYVAGHLPVKLPDYNSRLRVLVATYVTFSPNGTELLVNMGGEQVYLFD 296
>sp|Q8N5D0|WDTC1_HUMAN WD and tetratricopeptide repeats protein 1 OS=Homo sapiens GN=WDTC1
PE=1 SV=2
Length = 677
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Query: 145 YSGHRNSQT-VKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPH 203
Y GH N+ T +K NFFG N +Y++SGSD G FIW+K+ LVR++ GD +VN L+PH
Sbjct: 530 YCGHCNTTTDIKEANFFGSNAQYIVSGSDDGSFFIWEKETTNLVRVLQGDESIVNCLQPH 589
Query: 204 PHIPMFATCGIEKTVKLWAPMP 225
P AT GI+ V+LW P P
Sbjct: 590 PSYCFLATSGIDPVVRLWNPRP 611
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 27/112 (24%)
Query: 35 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTP---VDTFCPR------ 85
+ + ++P++ N AVG S + R+YDIR H + +P V TFC R
Sbjct: 185 VEAKCLTVNPQDNNCLAVGASGPFVRLYDIRMIHNHRKSMKQSPSAGVHTFCDRQKPLPD 244
Query: 86 ---------HLIGK-----NNIHITGLAYS----NTSELLISYNDELVYLFE 119
HL K N + + Y N +ELL++ E VYLF+
Sbjct: 245 GAAQYYVAGHLPVKLPDYNNRLRVLVATYVTFSPNGTELLVNMGGEQVYLFD 296
>sp|Q80T85|DCAF5_MOUSE DDB1- and CUL4-associated factor 5 OS=Mus musculus GN=Dcaf5 PE=1
SV=2
Length = 946
Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 93/221 (42%), Gaps = 41/221 (18%)
Query: 39 AIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGL 98
+ + P N N FA D ++DIR+ P F H + N + L
Sbjct: 147 GLSVSPVNDNIFASSSDDGRVLIWDIRESPHGEPFCLANYPSAF---HSVMFNPVEPRLL 203
Query: 99 AYSNTSE------------LLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVY- 145
A +N+ E L+ Y L ++ + L L++R P +Y
Sbjct: 204 ATANSKEGVGLWDIRKPQSSLLRYGGNLSLQSAMSVRFNSNGTQLLA--LRRRLPPVLYD 261
Query: 146 ------------SGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWK----KKGGKLVRL 189
G+ NS T+K F G D+Y++SGSD +L++WK + G + R+
Sbjct: 262 IHSRLPVFQFDNQGYFNSCTMKSCCFAGDRDQYILSGSDDFNLYMWKIPADPEAGGIGRV 321
Query: 190 -------MVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAP 223
+ G R +VNQ+ +PH M + G+EK +K+W+P
Sbjct: 322 VNGAFMVLKGHRSIVNQVRFNPHTYMICSSGVEKIIKIWSP 362
>sp|Q96JK2|DCAF5_HUMAN DDB1- and CUL4-associated factor 5 OS=Homo sapiens GN=DCAF5 PE=1
SV=2
Length = 942
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 93/221 (42%), Gaps = 41/221 (18%)
Query: 39 AIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGL 98
+ + P N N FA D ++DIR+ P F H + N + L
Sbjct: 147 GLSVSPVNDNIFASSSDDGRVLIWDIRESPHGEPFCLANYPSAF---HSVMFNPVEPRLL 203
Query: 99 AYSNTSE------------LLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVY- 145
A +N+ E L+ Y L ++ + L L++R P +Y
Sbjct: 204 ATANSKEGVGLWDIRKPQSSLLRYGGNLSLQSAMSVRFNSNGTQLLA--LRRRLPPVLYD 261
Query: 146 ------------SGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWK----KKGGKLVRL 189
G+ NS T+K F G D+Y++SGSD +L++W+ + G + R+
Sbjct: 262 IHSRLPVFQFDNQGYFNSCTMKSCCFAGDRDQYILSGSDDFNLYMWRIPADPEAGGIGRV 321
Query: 190 -------MVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAP 223
+ G R +VNQ+ +PH M + G+EK +K+W+P
Sbjct: 322 VNGAFMVLKGHRSIVNQVRFNPHTYMICSSGVEKIIKIWSP 362
>sp|Q9UT85|YIPC_SCHPO Uncharacterized WD repeat-containing protein C343.04c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC343.04c PE=4 SV=1
Length = 507
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 135 DLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR 194
DL++ + Y GH+ + G F G +D +V+SGS+ + IW ++ GKL+ + G
Sbjct: 411 DLEENRIVRQYMGHKLGNFLIGSCFGGKDDTFVLSGSEDDKIRIWHRESGKLLATLSGHV 470
Query: 195 HVVNQLEPHPHIP-MFATCGIEKTVKLWA 222
VN + +P P FA+ G + TV++W+
Sbjct: 471 KCVNYVAYNPVDPYQFASAGDDNTVRIWS 499
>sp|Q8C6G8|WDR26_MOUSE WD repeat-containing protein 26 OS=Mus musculus GN=Wdr26 PE=1 SV=3
Length = 641
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 135 DLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR 194
DLQ R + Y G F G N++++ SGS+ ++IW K+ + + G
Sbjct: 534 DLQDRVLVRKYQGVTQGFYTIHSCFGGHNEDFIASGSEDHKVYIWHKRSELPIAELTGHT 593
Query: 195 HVVNQLEPHPHIP-MFATCGIEKTVKLWAPMP 225
VN + +P IP M A+ + TV++W P P
Sbjct: 594 RTVNCVSWNPQIPSMMASASDDGTVRIWGPAP 625
>sp|Q9H7D7|WDR26_HUMAN WD repeat-containing protein 26 OS=Homo sapiens GN=WDR26 PE=1 SV=3
Length = 661
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 135 DLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR 194
DLQ R + Y G F G N++++ SGS+ ++IW K+ + + G
Sbjct: 554 DLQDRVLVRKYQGVTQGFYTIHSCFGGHNEDFIASGSEDHKVYIWHKRSELPIAELTGHT 613
Query: 195 HVVNQLEPHPHIP-MFATCGIEKTVKLWAPMP 225
VN + +P IP M A+ + TV++W P P
Sbjct: 614 RTVNCVSWNPQIPSMMASASDDGTVRIWGPAP 645
>sp|Q498M4|WDR5_RAT WD repeat-containing protein 5 OS=Rattus norvegicus GN=Wdr5 PE=2
SV=1
Length = 334
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 130 SLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRL 189
+L D K + + Y+GH+N + NF ++++SGS+ ++IW + ++V+
Sbjct: 237 TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQK 296
Query: 190 MVGDRHVVNQLEPHPHIPMFATCGIE--KTVKLW 221
+ G VV HP + A+ +E KT+KLW
Sbjct: 297 LQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
>sp|P61965|WDR5_MOUSE WD repeat-containing protein 5 OS=Mus musculus GN=Wdr5 PE=1 SV=1
Length = 334
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 130 SLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRL 189
+L D K + + Y+GH+N + NF ++++SGS+ ++IW + ++V+
Sbjct: 237 TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQK 296
Query: 190 MVGDRHVVNQLEPHPHIPMFATCGIE--KTVKLW 221
+ G VV HP + A+ +E KT+KLW
Sbjct: 297 LQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
>sp|P61964|WDR5_HUMAN WD repeat-containing protein 5 OS=Homo sapiens GN=WDR5 PE=1 SV=1
Length = 334
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 130 SLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRL 189
+L D K + + Y+GH+N + NF ++++SGS+ ++IW + ++V+
Sbjct: 237 TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQK 296
Query: 190 MVGDRHVVNQLEPHPHIPMFATCGIE--KTVKLW 221
+ G VV HP + A+ +E KT+KLW
Sbjct: 297 LQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
>sp|Q2KIG2|WDR5_BOVIN WD repeat-containing protein 5 OS=Bos taurus GN=WDR5 PE=2 SV=1
Length = 334
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 130 SLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRL 189
+L D K + + Y+GH+N + NF ++++SGS+ ++IW + ++V+
Sbjct: 237 TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQK 296
Query: 190 MVGDRHVVNQLEPHPHIPMFATCGIE--KTVKLW 221
+ G VV HP + A+ +E KT+KLW
Sbjct: 297 LQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
>sp|Q8H0T9|KTNB1_ARATH Katanin p80 WD40 repeat-containing subunit B1 homolog
OS=Arabidopsis thaliana GN=At5g23430 PE=2 SV=3
Length = 837
Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 135 DLQKREEPQVYSGHRNSQTVKGVNF--FGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVG 192
D++K+ Y GH +GVN F P+ +V+SG + + +W GKL+
Sbjct: 129 DIRKKGCIHTYKGH-----TRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKS 183
Query: 193 DRHVVNQLEPHPHIPMFATCGIEKTVKLW 221
+ L+ HPH + AT ++TVK W
Sbjct: 184 HEGQIQSLDFHPHEFLLATGSADRTVKFW 212
Score = 37.7 bits (86), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 32/62 (51%)
Query: 160 FGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVK 219
F ++ V +G+ G + +W + K+VR + G R ++ HP FA+ ++ +K
Sbjct: 67 FDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLK 126
Query: 220 LW 221
+W
Sbjct: 127 IW 128
>sp|Q5RE95|WDR5B_PONAB WD repeat-containing protein 5B OS=Pongo abelii PE=2 SV=1
Length = 330
Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 130 SLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRL 189
+L D + + Y+GH+N + NF ++++SGS+ ++IW + ++V+
Sbjct: 233 TLKLWDYSRGRCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQK 292
Query: 190 MVGDRHVVNQLEPHPHIPMFATCGIE--KTVKLW 221
+ G VV HP + A+ +E KT+KLW
Sbjct: 293 LQGHTDVVISAACHPTENLIASAALENDKTIKLW 326
Score = 35.4 bits (80), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 46/113 (40%), Gaps = 11/113 (9%)
Query: 117 LFEKNMGLGPSPLSLSPEDLQKREEPQ--------VYSGHRNSQTVKGVNFFGPNDEYVM 168
+ K G + L+LS Q +E P+ GH ++ V V F PN E++
Sbjct: 1 MATKESGDAKAQLALSSSANQSKEVPENPNYALKCTLVGH--TEAVSSVKF-SPNGEWLA 57
Query: 169 SGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLW 221
S S + IW GK R + G ++ + + +KT+KLW
Sbjct: 58 SSSADRLIIIWGAYDGKYERTLYGHNLEISDVAWSSDSSRLVSASDDKTLKLW 110
>sp|Q86VZ2|WDR5B_HUMAN WD repeat-containing protein 5B OS=Homo sapiens GN=WDR5B PE=2 SV=1
Length = 330
Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 143 QVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEP 202
+ Y+GH+N + NF ++++SGS+ ++IW + ++V+ + G VV
Sbjct: 246 KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISAAC 305
Query: 203 HPHIPMFATCGIE--KTVKLW 221
HP + A+ +E KT+KLW
Sbjct: 306 HPTENLIASAALENDKTIKLW 326
Score = 32.3 bits (72), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 11/105 (10%)
Query: 125 GPSPLSLSPEDLQKREEPQ--------VYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHL 176
+ L+LS Q +E P+ GH ++ V V F PN E++ S S +
Sbjct: 9 AKAQLALSSSANQSKEVPENPNYALKCTLVGH--TEAVSSVKF-SPNGEWLASSSADRLI 65
Query: 177 FIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLW 221
IW GK + + G ++ + + +KT+KLW
Sbjct: 66 IIWGAYDGKYEKTLYGHNLEISDVAWSSDSSRLVSASDDKTLKLW 110
>sp|Q23256|YH92_CAEEL Uncharacterized WD repeat-containing protein ZC302.2
OS=Caenorhabditis elegans GN=ZC302.2 PE=4 SV=1
Length = 501
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 130 SLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRL 189
SL D +K + + Y+GH+N + N P ++++SGS+ G + +W + ++V++
Sbjct: 405 SLKLWDPKKAKPLKYYNGHKNKKYCLFANMSVPLGKHIISGSEDGRILVWSIQTKQIVQI 464
Query: 190 MVGDRHVVNQLEPHPHIPMFATCGIE--KTVKLW 221
+ G V + HP + + A+ G+E +++W
Sbjct: 465 LEGHTTPVLATDSHPTLNIIASGGLEPDNVIRIW 498
>sp|Q28D01|WDR26_XENTR WD repeat-containing protein 26 OS=Xenopus tropicalis GN=wdr26 PE=2
SV=2
Length = 614
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 135 DLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR 194
DLQ R + Y G F G N++++ SGS+ +++W K+ + + G
Sbjct: 507 DLQDRVLVRKYQGVTQGFYTIHSCFGGHNEDFIASGSEDHKVYVWHKRSELPIAELTGHT 566
Query: 195 HVVNQLEPHPHIP-MFATCGIEKTVKLWAPMP 225
VN + +P IP + A+ + TV++W P P
Sbjct: 567 RTVNCVSWNPQIPSLMASASDDGTVRIWGPAP 598
>sp|Q8BFQ4|WDR82_MOUSE WD repeat-containing protein 82 OS=Mus musculus GN=Wdr82 PE=1 SV=1
Length = 313
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 74/181 (40%), Gaps = 32/181 (17%)
Query: 50 FAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSEL-LI 108
FA G + E ++YD+R P TF ++ TGL +SN +L LI
Sbjct: 162 FAAGVNSEMVKLYDLRSF-------DKGPFATFKMQY---DRTCEWTGLKFSNDGKLILI 211
Query: 109 SYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVM 168
S N + L + G+ + G+ NS+ V F P+ +++M
Sbjct: 212 STNGSFIRLIDAFKGV----------------VMHTFGGYANSKAVTLEASFTPDSQFIM 255
Query: 169 SGSDCGHLFIWKKKGGKLVRLMVGDRHV--VNQLEPHPHIPMFATCGIEKTVKLWAPMPT 226
GS+ G + +W + G V ++ G +H + L+ +P FA+ + W P
Sbjct: 256 IGSEDGKIHVWNGESGIKVAVLDG-KHTGPITCLQFNPKFMTFASAC--SNMAFWLPTID 312
Query: 227 D 227
D
Sbjct: 313 D 313
>sp|Q6UXN9|WDR82_HUMAN WD repeat-containing protein 82 OS=Homo sapiens GN=WDR82 PE=1 SV=1
Length = 313
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 74/181 (40%), Gaps = 32/181 (17%)
Query: 50 FAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSEL-LI 108
FA G + E ++YD+R P TF ++ TGL +SN +L LI
Sbjct: 162 FAAGVNSEMVKLYDLRSF-------DKGPFATFKMQY---DRTCEWTGLKFSNDGKLILI 211
Query: 109 SYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVM 168
S N + L + G+ + G+ NS+ V F P+ +++M
Sbjct: 212 STNGSFIRLIDAFKGV----------------VMHTFGGYANSKAVTLEASFTPDSQFIM 255
Query: 169 SGSDCGHLFIWKKKGGKLVRLMVGDRHV--VNQLEPHPHIPMFATCGIEKTVKLWAPMPT 226
GS+ G + +W + G V ++ G +H + L+ +P FA+ + W P
Sbjct: 256 IGSEDGKIHVWNGESGIKVAVLDG-KHTGPITCLQFNPKFMTFASAC--SNMAFWLPTID 312
Query: 227 D 227
D
Sbjct: 313 D 313
>sp|Q9V3J8|WDS_DROME Protein will die slowly OS=Drosophila melanogaster GN=wds PE=2 SV=1
Length = 361
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 82/206 (39%), Gaps = 49/206 (23%)
Query: 48 NYFAVGGSDEYARVYDIR--KCHWYSPISSDTPVDTF----------------------- 82
N G DE R++D+R KC P SD PV
Sbjct: 169 NLIVSGSFDESVRIWDVRTGKCLKTLPAHSD-PVSAVHFNRDGSLIVSSSYDGLCRIWDT 227
Query: 83 ----CPRHLIGKNNIHITGLAYS-NTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQ 137
C + LI +N ++ + +S N +L + D + L+ D
Sbjct: 228 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW----------------DYS 271
Query: 138 KREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVV 197
K + + Y+GH+N + NF ++++SGS+ ++IW + ++V+ + G V
Sbjct: 272 KGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTV 331
Query: 198 NQLEPHPHIPMFATCGIE--KTVKLW 221
HP + A+ +E KT+KLW
Sbjct: 332 LCTACHPTENIIASAALENDKTIKLW 357
>sp|Q5ZMV7|WDR82_CHICK WD repeat-containing protein 82 OS=Gallus gallus GN=WDR82 PE=2 SV=1
Length = 313
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 73/181 (40%), Gaps = 32/181 (17%)
Query: 50 FAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSEL-LI 108
FA G + E ++YD+R P TF ++ TGL +SN +L LI
Sbjct: 162 FAAGVNSEMVKLYDLRSF-------DKGPFATFKMQY---DRTCEWTGLKFSNDGKLILI 211
Query: 109 SYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVM 168
S N + L D K + G+ NS+ V F P+ +++M
Sbjct: 212 STNGGFIRLI----------------DAFKGAVLHTFGGYNNSKAVTLEASFTPDSQFIM 255
Query: 169 SGSDCGHLFIWKKKGGKLVRLMVGDRHV--VNQLEPHPHIPMFATCGIEKTVKLWAPMPT 226
GS+ G + +W + G V ++ G +H + L+ +P FA+ + W P
Sbjct: 256 IGSEDGKIHVWNGESGMKVAVLDG-KHTGPITCLQFNPKFMTFASAC--SNMAFWLPTID 312
Query: 227 D 227
D
Sbjct: 313 D 313
>sp|Q6NV31|WDR82_DANRE WD repeat-containing protein 82 OS=Danio rerio GN=wdr82 PE=2 SV=1
Length = 313
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 74/180 (41%), Gaps = 30/180 (16%)
Query: 50 FAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLIS 109
FA G + E ++YD+R P TF ++ + TGL +SN +L+
Sbjct: 162 FAAGVNSEMVKLYDLRSF-------DKGPFATFKLQY---ERTCEWTGLKFSNDGKLI-- 209
Query: 110 YNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMS 169
L N G +L D K + G+ NS+ V F P+ +++M
Sbjct: 210 -------LVSTNGG------TLRVLDAFKGAVLHSFGGYNNSKGVILEASFTPDSQFIMI 256
Query: 170 GSDCGHLFIWKKKGGKLVRLMVGDRHV--VNQLEPHPHIPMFATCGIEKTVKLWAPMPTD 227
GS+ G + +W + G V L+ G +H V L+ +P FA+ + W P D
Sbjct: 257 GSEDGKIHVWNAESGMKVALLDG-KHTGPVTCLQFNPKFMTFASAC--SNMAFWLPTIDD 313
>sp|Q9D7H2|WDR5B_MOUSE WD repeat-containing protein 5B OS=Mus musculus GN=Wdr5b PE=1 SV=1
Length = 328
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 143 QVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEP 202
+ Y+GH+N + +F ++V+SGS+ ++IW + ++V+ + G VV
Sbjct: 244 KTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAAC 303
Query: 203 HPHIPMFATCGIE--KTVKLWA 222
HP + A+ +E KT+K+W+
Sbjct: 304 HPTKNIIASAALENDKTIKVWS 325
>sp|Q5SP67|WDR26_DANRE WD repeat-containing protein 26 OS=Danio rerio GN=wdr26 PE=1 SV=1
Length = 576
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 135 DLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR 194
DLQ R + Y G F G N++++ SGS+ ++IW K+ + + G
Sbjct: 466 DLQDRVLVRKYQGVTQGFYTIHSCFGGHNEDFIASGSEDHKVYIWHKRSELPIVELTGHT 525
Query: 195 HVVNQLEPHPHIP-MFATCGIEKTVKLWAPMP 225
VN + +P IP + A+ + TV++W P P
Sbjct: 526 RTVNCVSWNPCIPSLMASASDDGTVRIWGPAP 557
>sp|Q4V7Y7|KTNB1_XENLA Katanin p80 WD40 repeat-containing subunit B1 OS=Xenopus laevis
GN=katnb1 PE=1 SV=1
Length = 655
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 160 FGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVK 219
F ++E +++GS G L IW + K++R ++G + V+ L+ HP+ A+ ++ +K
Sbjct: 71 FNNSEELIVAGSQSGSLRIWDLEAAKILRTLMGHKANVSSLDFHPYGEFVASGSLDTNIK 130
Query: 220 LW 221
LW
Sbjct: 131 LW 132
Score = 40.8 bits (94), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 145 YSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHP 204
Y GH +Q V+ + F P+ +++ S SD + +W GK++ + + VN +E HP
Sbjct: 143 YKGH--TQAVRCLRF-SPDGKWLASASDDHSVKLWDLTAGKMMAELSEHKGPVNIIEFHP 199
Query: 205 HIPMFATCGIEKTVKLW 221
+ + A+ ++TV+ W
Sbjct: 200 NEYLLASGSADRTVRFW 216
>sp|Q4V8C4|WDR5B_RAT WD repeat-containing protein 5B OS=Rattus norvegicus GN=Wdr5b PE=2
SV=1
Length = 328
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 143 QVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEP 202
+ Y+GH+N + +F ++V+SGS+ ++IW + ++V+ + G VV
Sbjct: 244 KTYTGHKNEKYCIFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAAC 303
Query: 203 HPHIPMFATCGIE--KTVKLWA 222
HP + A+ +E KT+K+W+
Sbjct: 304 HPTENIIASAALENDKTIKIWS 325
Score = 34.3 bits (77), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 15/103 (14%)
Query: 127 SPLSLSPEDLQKREEPQ--------VYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFI 178
SPLS +P Q+ EEPQ +GH S + V F PN E++ S + + I
Sbjct: 13 SPLS-AP---QRVEEPQKPNYALRLTLAGH--SAAISSVKF-SPNGEWLASSAADALIII 65
Query: 179 WKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLW 221
W GK + + G ++ + + +KT+KLW
Sbjct: 66 WGAYDGKCKKTLYGHSLEISDVAWSSDSSRLVSASDDKTLKLW 108
>sp|Q5M786|WDR5_XENTR WD repeat-containing protein 5 OS=Xenopus tropicalis GN=wdr5 PE=2
SV=1
Length = 334
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 130 SLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRL 189
+L D K + + Y+ H+N + NF ++++SGS+ ++IW + ++V+
Sbjct: 237 TLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEVVQK 296
Query: 190 MVGDRHVVNQLEPHPHIPMFATCGIE--KTVKLW 221
+ G VV HP + A+ +E KT+KLW
Sbjct: 297 LQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
>sp|Q93847|YZLL_CAEEL Uncharacterized WD repeat-containing protein K04G11.4
OS=Caenorhabditis elegans GN=K04G11.4 PE=4 SV=1
Length = 395
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 80/195 (41%), Gaps = 37/195 (18%)
Query: 29 KQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLI 88
+ P++S+ N R+ Y A G D R++D C + LI
Sbjct: 232 EDPVSSVCFN------RDGAYLASGSYDGIVRIWD--------------STTGTCVKTLI 271
Query: 89 GKNNIHITGLAYSNTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGH 148
+ + IT + +S + Y+ N+ +L D QK + Y+GH
Sbjct: 272 DEEHPPITHVKFSPNGK----------YILASNLNN-----TLKLWDYQKLRVLKEYTGH 316
Query: 149 RNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPM 208
NS+ NF ++++SGS+ ++IW + ++++ + G V + HP +
Sbjct: 317 ENSKYCVAANFSVTGGKWIVSGSEDHKVYIWNLQTREILQTLDGHNTAVMCTDCHPGQNI 376
Query: 209 FATCGIEKT--VKLW 221
A+ +E +K+W
Sbjct: 377 IASAALEPDMRIKIW 391
>sp|Q5ZJW8|DTL_CHICK Denticleless protein homolog OS=Gallus gallus GN=DTL PE=2 SV=1
Length = 720
Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 26/178 (14%)
Query: 50 FAVGGSDEYARVYDIRK---CHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSEL 106
+ G D +V+D+RK + P+ S + +G +++ + S + L
Sbjct: 228 ISAGAVDGVIKVWDLRKNYAAYRQDPVPSKSFFYPGTSTRKLGYSSLVLD----STGANL 283
Query: 107 LISYNDELVYLFEKNM-GLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDE 165
+ D+ +Y+F NM L P++ V+SGH+NS T + P+D+
Sbjct: 284 FANCTDDSIYMF--NMTSLKTFPVA-------------VFSGHQNS-TFYIKSSISPDDQ 327
Query: 166 YVMSGSDCGHLFIWKKKGGKL-VRLMVGDRHVVNQLEPHPH-IPMFATCGIEKTVKLW 221
+++SGS + +IWK L R++VG V + P ATC + TV++W
Sbjct: 328 FLVSGSSDCNAYIWKVSEPSLPPRILVGHSQEVTSIAWCPSDFTKIATCSDDNTVRIW 385
>sp|Q8YV57|Y2124_NOSS1 Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=all2124 PE=4 SV=1
Length = 1683
Score = 44.7 bits (104), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 120 KNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIW 179
KN+ S S+ D + +GH S V V F P+ + + +GS+ + +W
Sbjct: 1168 KNLASASSDHSIKLWDTTSGQLLMTLTGH--SAGVITVRF-SPDGQTIAAGSEDKTVKLW 1224
Query: 180 KKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLW 221
++ GKL++ + G + VN L P A+ +KT+KLW
Sbjct: 1225 HRQDGKLLKTLNGHQDWVNSLSFSPDGKTLASASADKTIKLW 1266
Score = 36.6 bits (83), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 32/62 (51%)
Query: 160 FGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVK 219
F P + + S + + IW+ + GK ++ ++G + VN++ P A+ + TVK
Sbjct: 1412 FTPQGDLIASANADKTVKIWRVRDGKALKTLIGHDNEVNKVNFSPDGKTLASASRDNTVK 1471
Query: 220 LW 221
LW
Sbjct: 1472 LW 1473
Score = 35.0 bits (79), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 29/62 (46%)
Query: 160 FGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVK 219
F P+ + + SG + +W+ G L++ + G VN + P A+ + ++K
Sbjct: 1121 FSPDGQTIASGGSDKTIKLWQTSDGTLLKTITGHEQTVNNVYFSPDGKNLASASSDHSIK 1180
Query: 220 LW 221
LW
Sbjct: 1181 LW 1182
Score = 34.7 bits (78), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 30/62 (48%)
Query: 160 FGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVK 219
F P+ + + S S + +W G L++ + +V + +P M A+ +KTVK
Sbjct: 1496 FSPDGKIIASASADKTIRLWDSFSGNLIKSLPAHNDLVYSVNFNPDGSMLASTSADKTVK 1555
Query: 220 LW 221
LW
Sbjct: 1556 LW 1557
Score = 34.3 bits (77), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 143 QVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEP 202
+ +GH QTV V +F P+ + + S S + +W G+L+ + G V +
Sbjct: 1149 KTITGHE--QTVNNV-YFSPDGKNLASASSDHSIKLWDTTSGQLLMTLTGHSAGVITVRF 1205
Query: 203 HPHIPMFATCGIEKTVKLW 221
P A +KTVKLW
Sbjct: 1206 SPDGQTIAAGSEDKTVKLW 1224
Score = 32.0 bits (71), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 33/82 (40%)
Query: 160 FGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVK 219
F P+ + S S + +W+ G L+ G +VV P A+ +KTVK
Sbjct: 1538 FNPDGSMLASTSADKTVKLWRSHDGHLLHTFSGHSNVVYSSSFSPDGRYIASASEDKTVK 1597
Query: 220 LWAPMPTDFPPLPDNAEKIMKA 241
+W LP + +M A
Sbjct: 1598 IWQIDGHLLTTLPQHQAGVMSA 1619
>sp|Q7ZUV2|KTNB1_DANRE Katanin p80 WD40 repeat-containing subunit B1 OS=Danio rerio
GN=katnb1 PE=2 SV=1
Length = 694
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 37/66 (56%)
Query: 156 GVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIE 215
G F ++E V++GS G L +W + K++R ++G + ++ L+ HP A+ ++
Sbjct: 67 GCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVD 126
Query: 216 KTVKLW 221
+KLW
Sbjct: 127 SNIKLW 132
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 145 YSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHP 204
Y GH +Q V+ + F P+ +++ S SD + +W GK++ VN ++ HP
Sbjct: 143 YKGH--TQAVRCL-AFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHP 199
Query: 205 HIPMFATCGIEKTVKLW 221
+ + A+ ++TVKLW
Sbjct: 200 NEYLLASGSADRTVKLW 216
Score = 31.6 bits (70), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 7/103 (6%)
Query: 130 SLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRL 189
SL DL+ + + GH+ S + ++F P EY+ SGS ++ +W + V
Sbjct: 86 SLRLWDLEAAKILRTLMGHKAS--ISSLDFH-PMGEYLASGSVDSNIKLWDVRRKGCVFR 142
Query: 190 MVGDRHVVNQLEPHPHIPMFATCGIEKTVKLW----APMPTDF 228
G V L P A+ + TVKLW M T+F
Sbjct: 143 YKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEF 185
>sp|B4QHG6|LIS1_DROSI Lissencephaly-1 homolog OS=Drosophila simulans GN=Lis-1 PE=3 SV=1
Length = 411
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 2/101 (1%)
Query: 127 SPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKL 186
+ LS+ D Q+ E + + H + V V F P +YV+S S + +W+ G
Sbjct: 170 ADLSIKLWDFQQSYEC-IKTMHGHDHNVSSVAFV-PAGDYVLSASRDRTIKMWEVATGYC 227
Query: 187 VRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD 227
V+ G R V + H +FATC ++T+++W D
Sbjct: 228 VKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKD 268
Score = 39.3 bits (90), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 146 SGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPH 205
SGH N V+G+ F P +Y++S SD + +W + + ++ + +H ++ H
Sbjct: 336 SGHDN--WVRGLAFH-PGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKA 392
Query: 206 IPMFATCGIEKTVKLW 221
P + +++TVK+W
Sbjct: 393 HPYVISGSVDQTVKVW 408
>sp|B4HSL3|LIS1_DROSE Lissencephaly-1 homolog OS=Drosophila sechellia GN=Lis-1 PE=3 SV=1
Length = 411
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 2/101 (1%)
Query: 127 SPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKL 186
+ LS+ D Q+ E + + H + V V F P +YV+S S + +W+ G
Sbjct: 170 ADLSIKLWDFQQSYEC-IKTMHGHDHNVSSVAFV-PAGDYVLSASRDRTIKMWEVATGYC 227
Query: 187 VRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD 227
V+ G R V + H +FATC ++T+++W D
Sbjct: 228 VKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKD 268
Score = 39.3 bits (90), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 146 SGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPH 205
SGH N V+G+ F P +Y++S SD + +W + + ++ + +H ++ H
Sbjct: 336 SGHDN--WVRGLAFH-PGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKA 392
Query: 206 IPMFATCGIEKTVKLW 221
P + +++TVK+W
Sbjct: 393 HPYVISGSVDQTVKVW 408
>sp|Q7KNS3|LIS1_DROME Lissencephaly-1 homolog OS=Drosophila melanogaster GN=Lis-1 PE=1
SV=2
Length = 411
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 2/101 (1%)
Query: 127 SPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKL 186
+ LS+ D Q+ E + + H + V V F P +YV+S S + +W+ G
Sbjct: 170 ADLSIKLWDFQQSYEC-IKTMHGHDHNVSSVAFV-PAGDYVLSASRDRTIKMWEVATGYC 227
Query: 187 VRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD 227
V+ G R V + H +FATC ++T+++W D
Sbjct: 228 VKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKD 268
Score = 39.3 bits (90), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 146 SGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPH 205
SGH N V+G+ F P +Y++S SD + +W + + ++ + +H ++ H
Sbjct: 336 SGHDN--WVRGLAFH-PGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKA 392
Query: 206 IPMFATCGIEKTVKLW 221
P + +++TVK+W
Sbjct: 393 HPYVISGSVDQTVKVW 408
>sp|B4P6P9|LIS1_DROYA Lissencephaly-1 homolog OS=Drosophila yakuba GN=Lis-1 PE=3 SV=1
Length = 411
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 2/101 (1%)
Query: 127 SPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKL 186
+ LS+ D Q+ E + + H + V V F P +YV+S S + +W+ G
Sbjct: 170 ADLSIKLWDFQQSYEC-IKTMHGHDHNVSSVAFV-PAGDYVLSASRDRTIKMWEVATGYC 227
Query: 187 VRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD 227
V+ G R V + H +FATC ++T+++W D
Sbjct: 228 VKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKD 268
Score = 38.9 bits (89), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 146 SGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPH 205
SGH N V+G+ F P +Y++S SD + +W + + ++ + +H ++ H
Sbjct: 336 SGHDN--WVRGLAFH-PGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKA 392
Query: 206 IPMFATCGIEKTVKLW 221
P + +++TVK+W
Sbjct: 393 HPYVISGSVDQTVKVW 408
>sp|B3NPW0|LIS1_DROER Lissencephaly-1 homolog OS=Drosophila erecta GN=Lis-1 PE=3 SV=1
Length = 411
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 2/101 (1%)
Query: 127 SPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKL 186
+ LS+ D Q+ E + + H + V V F P +YV+S S + +W+ G
Sbjct: 170 ADLSIKLWDFQQSYEC-IKTMHGHDHNVSSVAFV-PAGDYVLSASRDRTIKMWEVATGYC 227
Query: 187 VRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD 227
V+ G R V + H +FATC ++T+++W D
Sbjct: 228 VKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKD 268
Score = 38.9 bits (89), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 146 SGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPH 205
SGH N V+G+ F P +Y++S SD + +W + + ++ + +H ++ H
Sbjct: 336 SGHDN--WVRGLAFH-PGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKA 392
Query: 206 IPMFATCGIEKTVKLW 221
P + +++TVK+W
Sbjct: 393 HPYVISGSVDQTVKVW 408
>sp|Q4RJN5|LIS1_TETNG Lissencephaly-1 homolog OS=Tetraodon nigroviridis GN=pafah1b1 PE=3
SV=1
Length = 410
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 147 GHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHI 206
GH N V+GV F P +++++ +D L IW K + ++ + H V L+ H
Sbjct: 336 GHDN--WVRGV-LFHPGGKFIVTCADDKTLRIWDYKNKRCMKTLCAHEHFVTSLDFHKAA 392
Query: 207 PMFATCGIEKTVKLW 221
P T +++TVK+W
Sbjct: 393 PYVVTGSVDQTVKVW 407
Score = 38.9 bits (89), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 3/106 (2%)
Query: 117 LFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHL 176
L K + + +++ D Q E + GH V V PN ++++S S +
Sbjct: 160 LTGKLLASCSADMTIKLWDFQSFECIRTMHGH--DHNVSSVAIM-PNGDHIISASRDKTM 216
Query: 177 FIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWA 222
+W+ G V+ G R V + P+ + A+C ++TV++W
Sbjct: 217 KMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262
Score = 31.6 bits (70), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 40/98 (40%), Gaps = 4/98 (4%)
Query: 125 GPSPLSLSPEDLQKRE-EPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKG 183
GP P++ R E SGHR+ T F P ++S S+ + +W +
Sbjct: 83 GPVSQKRDPKEWIPRPPERYALSGHRSPVTRV---IFHPVFSVMVSASEDATIKVWDYET 139
Query: 184 GKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLW 221
G R + G V + + A+C + T+KLW
Sbjct: 140 GDFERTLKGHTDSVQDISFDLTGKLLASCSADMTIKLW 177
Score = 31.6 bits (70), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 166 YVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLW 221
+++SGS + +W G + +VG + V + HP TC +KT+++W
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHPGGKFIVTCADDKTLRIW 365
>sp|O75529|TAF5L_HUMAN TAF5-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 5L OS=Homo sapiens GN=TAF5L PE=1
SV=1
Length = 589
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 17/117 (14%)
Query: 143 QVYSGH-RNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLE 201
++Y+GH + VK F PN Y+ +GS + +W + G VRL G R V L
Sbjct: 420 RIYAGHLADVDCVK----FHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLA 475
Query: 202 PHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDH-SRITLTPD 257
P+ A+ G ++ +KLW D A + +G D+ + +T +PD
Sbjct: 476 FSPNGKYLASAGEDQRLKLW-----------DLASGTLYKELRGHTDNITSLTFSPD 521
Score = 36.6 bits (83), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/173 (19%), Positives = 65/173 (37%), Gaps = 33/173 (19%)
Query: 49 YFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLI 108
YFA G D AR++ + + P+ + HL + + + N++ L
Sbjct: 398 YFASGSHDRTARLWSFDRTY---------PLRIYAG-HLADVDCVKF----HPNSNYLAT 443
Query: 109 SYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVM 168
D+ V L+ G ++++GHR F PN +Y+
Sbjct: 444 GSTDKTVRLWSAQQG----------------NSVRLFTGHRGPVLSLA---FSPNGKYLA 484
Query: 169 SGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLW 221
S + L +W G L + + G + L P + A+ ++ +V++W
Sbjct: 485 SAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIASASMDNSVRVW 537
>sp|A7S338|LIS1_NEMVE Lissencephaly-1 homolog OS=Nematostella vectensis GN=v1g242515 PE=3
SV=1
Length = 409
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 147 GHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHI 206
GH N V+ V F P ++++S SD L IW K + + +V H V L+ H
Sbjct: 335 GHDN--WVRAV-MFHPGGKFIVSCSDDKTLRIWDYKNKRCAKTLVAHEHFVTTLDFHKSA 391
Query: 207 PMFATCGIEKTVKLW 221
P AT ++ T+K+W
Sbjct: 392 PFVATGSVDLTLKVW 406
Score = 34.7 bits (78), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 21/103 (20%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 120 KNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIW 179
K + + +++ D Q E + GH V ++F P+ ++++S S + +W
Sbjct: 161 KFLASSSADMTIKLWDFQGFECIRTLHGH--DHNVSSISFL-PSGDHLVSASRDKTIKMW 217
Query: 180 KKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWA 222
+ G V+ G V ++ P+ + A+C ++T+++W
Sbjct: 218 EIATGYCVKTFQGHGEWVRRVRPNADGSLIASCSNDQTIRVWV 260
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.136 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 126,132,729
Number of Sequences: 539616
Number of extensions: 5589188
Number of successful extensions: 14421
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 191
Number of HSP's successfully gapped in prelim test: 168
Number of HSP's that attempted gapping in prelim test: 13422
Number of HSP's gapped (non-prelim): 1081
length of query: 316
length of database: 191,569,459
effective HSP length: 117
effective length of query: 199
effective length of database: 128,434,387
effective search space: 25558443013
effective search space used: 25558443013
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)