Query 021160
Match_columns 316
No_of_seqs 392 out of 2043
Neff 11.3
Searched_HMMs 29240
Date Mon Mar 25 13:37:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021160.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021160hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ow8_A WD repeat-containing pr 100.0 2.5E-39 8.6E-44 268.6 28.9 252 1-297 56-319 (321)
2 4gqb_B Methylosome protein 50; 100.0 3.8E-39 1.3E-43 269.6 28.1 228 2-270 102-334 (344)
3 1vyh_C Platelet-activating fac 100.0 1.6E-38 5.4E-43 272.6 27.7 249 2-297 129-409 (410)
4 1got_B GT-beta; complex (GTP-b 100.0 3.6E-37 1.2E-41 257.8 29.6 252 2-296 76-340 (340)
5 3ow8_A WD repeat-containing pr 100.0 1.9E-37 6.5E-42 257.3 24.8 218 1-265 100-319 (321)
6 3frx_A Guanine nucleotide-bind 100.0 1.3E-36 4.6E-41 252.1 28.5 254 2-300 39-318 (319)
7 2ynn_A Coatomer subunit beta'; 100.0 8.1E-37 2.8E-41 251.7 26.8 235 32-301 11-261 (304)
8 1vyh_C Platelet-activating fac 100.0 1.3E-36 4.6E-41 260.6 28.0 235 31-301 105-371 (410)
9 4g56_B MGC81050 protein; prote 100.0 2.5E-37 8.6E-42 260.3 22.9 228 2-270 114-346 (357)
10 2ynn_A Coatomer subunit beta'; 100.0 2.5E-36 8.5E-41 248.8 26.7 224 1-270 33-262 (304)
11 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.8E-35 6.1E-40 248.0 32.1 262 2-302 37-338 (345)
12 2hes_X YDR267CP; beta-propelle 100.0 1.4E-35 4.9E-40 247.1 28.8 265 2-299 33-328 (330)
13 2pbi_B Guanine nucleotide-bind 100.0 2.4E-35 8.3E-40 248.0 29.9 254 2-296 85-354 (354)
14 4ery_A WD repeat-containing pr 100.0 5.1E-35 1.7E-39 241.8 29.4 236 31-301 20-270 (312)
15 4gqb_B Methylosome protein 50; 100.0 5.3E-36 1.8E-40 250.6 23.6 236 33-301 81-333 (344)
16 2xzm_R RACK1; ribosome, transl 100.0 1.1E-34 3.8E-39 243.0 30.4 254 2-300 48-341 (343)
17 3iz6_a 40S ribosomal protein R 100.0 6.3E-36 2.1E-40 254.0 23.0 262 2-301 87-377 (380)
18 3fm0_A Protein CIAO1; WDR39,SG 100.0 3.4E-35 1.2E-39 246.3 27.1 239 32-301 13-285 (345)
19 1got_B GT-beta; complex (GTP-b 100.0 5.2E-35 1.8E-39 244.7 28.1 238 31-301 52-303 (340)
20 1nr0_A Actin interacting prote 100.0 1E-34 3.5E-39 261.1 30.6 252 3-301 39-357 (611)
21 4g56_B MGC81050 protein; prote 100.0 7.5E-36 2.6E-40 251.3 21.7 261 2-302 69-346 (357)
22 4ery_A WD repeat-containing pr 100.0 2.1E-34 7.1E-39 238.1 28.4 250 2-297 44-310 (312)
23 2pbi_B Guanine nucleotide-bind 100.0 2.7E-34 9.2E-39 241.6 28.5 241 31-301 61-317 (354)
24 1nr0_A Actin interacting prote 100.0 1.2E-34 4.1E-39 260.7 27.2 275 2-301 169-569 (611)
25 1erj_A Transcriptional repress 100.0 2.4E-34 8.3E-39 245.3 27.4 261 2-299 84-389 (393)
26 2pm7_B Protein transport prote 100.0 9.7E-34 3.3E-38 232.5 29.1 236 31-298 6-284 (297)
27 2pm7_B Protein transport prote 100.0 1.1E-33 3.6E-38 232.3 29.1 227 1-268 29-286 (297)
28 3iz6_a 40S ribosomal protein R 100.0 1.3E-34 4.6E-39 245.8 22.9 242 31-301 63-331 (380)
29 3frx_A Guanine nucleotide-bind 100.0 4E-34 1.4E-38 237.2 25.1 237 31-299 14-267 (319)
30 1gxr_A ESG1, transducin-like e 100.0 3.9E-33 1.3E-37 232.3 29.7 255 2-297 71-335 (337)
31 2hes_X YDR267CP; beta-propelle 100.0 1.4E-33 4.6E-38 235.1 26.7 240 32-300 12-281 (330)
32 3dm0_A Maltose-binding peripla 100.0 1.3E-33 4.4E-38 257.7 27.9 256 2-298 404-692 (694)
33 1erj_A Transcriptional repress 100.0 1.7E-33 5.7E-38 240.1 25.6 220 2-268 144-390 (393)
34 3bg1_A Protein SEC13 homolog; 100.0 1.2E-33 4.1E-38 234.0 23.6 227 2-268 34-294 (316)
35 3bg1_A Protein SEC13 homolog; 100.0 6E-34 2.1E-38 235.8 19.9 236 31-298 10-292 (316)
36 2xzm_R RACK1; ribosome, transl 100.0 1.5E-32 5.1E-37 230.1 28.5 240 31-301 18-287 (343)
37 3vl1_A 26S proteasome regulato 100.0 2.8E-33 9.7E-38 240.6 24.1 222 2-268 118-366 (420)
38 4e54_B DNA damage-binding prot 100.0 1.8E-33 6.3E-38 243.0 22.4 256 2-301 141-432 (435)
39 3vl1_A 26S proteasome regulato 100.0 8.8E-33 3E-37 237.5 26.4 251 2-300 77-366 (420)
40 3i2n_A WD repeat-containing pr 100.0 1.5E-32 5.2E-37 230.7 27.1 259 2-301 43-355 (357)
41 2ymu_A WD-40 repeat protein; u 100.0 6.8E-33 2.3E-37 247.7 26.1 244 2-296 324-577 (577)
42 4aez_A CDC20, WD repeat-contai 100.0 3.5E-32 1.2E-36 232.6 29.3 253 2-302 112-383 (401)
43 4e54_B DNA damage-binding prot 100.0 1.2E-32 4E-37 238.0 25.9 205 32-269 117-329 (435)
44 3ei3_B DNA damage-binding prot 100.0 2E-32 6.7E-37 232.7 26.9 252 2-299 95-382 (383)
45 4h5i_A Guanine nucleotide-exch 100.0 2.6E-32 9E-37 230.3 27.1 227 2-268 103-344 (365)
46 2pm9_A Protein WEB1, protein t 100.0 3E-32 1E-36 233.7 27.8 269 2-302 44-340 (416)
47 1r5m_A SIR4-interacting protei 100.0 3.2E-32 1.1E-36 233.8 27.7 274 2-298 67-424 (425)
48 2j04_B YDR362CP, TAU91; beta p 100.0 4.7E-33 1.6E-37 244.1 22.3 234 2-268 182-429 (524)
49 3k26_A Polycomb protein EED; W 100.0 3.5E-33 1.2E-37 235.3 20.8 254 2-298 43-365 (366)
50 1sq9_A Antiviral protein SKI8; 100.0 4.3E-32 1.5E-36 231.5 27.6 257 2-300 35-396 (397)
51 1k8k_C P40, ARP2/3 complex 41 100.0 3.6E-32 1.2E-36 229.8 26.5 220 2-267 29-274 (372)
52 3dwl_C Actin-related protein 2 100.0 5.5E-33 1.9E-37 235.5 21.1 224 2-266 32-280 (377)
53 2ymu_A WD-40 repeat protein; u 100.0 1.8E-32 6E-37 245.0 25.4 212 2-264 365-577 (577)
54 2pm9_A Protein WEB1, protein t 100.0 3.6E-33 1.2E-37 239.5 20.1 263 2-299 88-414 (416)
55 3v7d_B Cell division control p 100.0 6.7E-32 2.3E-36 235.1 27.8 264 2-302 141-424 (464)
56 4aow_A Guanine nucleotide-bind 100.0 1.5E-31 5.3E-36 223.2 27.7 258 1-301 59-339 (340)
57 3ei3_B DNA damage-binding prot 100.0 1.3E-31 4.5E-36 227.6 27.2 236 31-302 70-342 (383)
58 2aq5_A Coronin-1A; WD40 repeat 100.0 1.1E-31 3.6E-36 229.7 26.5 261 2-300 56-343 (402)
59 3jrp_A Fusion protein of prote 100.0 7.5E-32 2.6E-36 228.2 24.9 234 32-299 9-287 (379)
60 3zwl_B Eukaryotic translation 100.0 3.6E-31 1.2E-35 223.1 28.6 264 2-300 53-347 (369)
61 2j04_B YDR362CP, TAU91; beta p 100.0 5.5E-32 1.9E-36 237.4 23.7 263 2-299 234-517 (524)
62 3dm0_A Maltose-binding peripla 100.0 1.4E-31 4.8E-36 244.3 26.7 240 31-301 379-634 (694)
63 1k8k_C P40, ARP2/3 complex 41 100.0 1.6E-31 5.6E-36 225.7 25.3 244 2-270 73-364 (372)
64 4gga_A P55CDC, cell division c 100.0 2.4E-31 8.2E-36 228.8 26.7 254 1-301 123-397 (420)
65 1gxr_A ESG1, transducin-like e 100.0 3E-31 1E-35 221.0 26.1 241 32-302 49-299 (337)
66 3dw8_B Serine/threonine-protei 100.0 2.2E-31 7.4E-36 230.6 25.7 250 2-270 49-376 (447)
67 4a11_B DNA excision repair pro 100.0 3.7E-31 1.3E-35 226.2 25.7 265 3-302 23-368 (408)
68 3dwl_C Actin-related protein 2 100.0 2.2E-32 7.4E-37 231.8 17.5 233 33-298 10-280 (377)
69 3k26_A Polycomb protein EED; W 100.0 8.3E-32 2.8E-36 226.9 20.8 234 2-267 94-366 (366)
70 3f3f_A Nucleoporin SEH1; struc 100.0 8E-31 2.7E-35 219.0 26.2 249 2-271 32-341 (351)
71 1sq9_A Antiviral protein SKI8; 100.0 2.8E-31 9.5E-36 226.4 23.2 230 2-268 90-396 (397)
72 3f3f_A Nucleoporin SEH1; struc 100.0 9.3E-31 3.2E-35 218.6 25.8 249 31-302 8-340 (351)
73 3jrp_A Fusion protein of prote 100.0 1.6E-30 5.6E-35 220.0 27.5 228 2-270 32-290 (379)
74 3lrv_A PRE-mRNA-splicing facto 100.0 1.5E-30 5.1E-35 217.9 26.0 257 2-299 57-333 (343)
75 3odt_A Protein DOA1; ubiquitin 100.0 6.1E-30 2.1E-34 210.9 27.9 250 2-303 38-300 (313)
76 1p22_A F-BOX/WD-repeat protein 100.0 3.3E-30 1.1E-34 222.7 27.4 244 2-302 152-417 (435)
77 3gre_A Serine/threonine-protei 100.0 7.7E-31 2.6E-35 226.7 23.3 241 31-302 60-362 (437)
78 4aow_A Guanine nucleotide-bind 100.0 6.3E-30 2.2E-34 213.4 26.9 239 31-300 35-287 (340)
79 3dw8_B Serine/threonine-protei 100.0 1.4E-30 4.9E-35 225.4 23.7 260 32-302 26-376 (447)
80 3sfz_A APAF-1, apoptotic pepti 100.0 3.2E-30 1.1E-34 249.4 27.9 253 2-301 636-994 (1249)
81 2xyi_A Probable histone-bindin 100.0 7E-30 2.4E-34 220.3 26.4 233 2-268 150-411 (430)
82 3zwl_B Eukaryotic translation 100.0 8.6E-30 3E-34 214.7 26.4 223 31-290 29-281 (369)
83 3mkq_A Coatomer beta'-subunit; 100.0 3.6E-30 1.2E-34 238.9 25.8 234 32-301 11-261 (814)
84 1pgu_A Actin interacting prote 100.0 5E-30 1.7E-34 230.6 25.9 257 2-300 38-329 (615)
85 3i2n_A WD repeat-containing pr 100.0 2.1E-30 7.3E-35 217.6 21.9 238 32-302 16-294 (357)
86 4ggc_A P55CDC, cell division c 100.0 1.4E-29 4.7E-34 209.4 26.4 254 1-300 43-316 (318)
87 2xyi_A Probable histone-bindin 100.0 8E-30 2.7E-34 219.9 25.2 251 32-300 126-411 (430)
88 3gre_A Serine/threonine-protei 100.0 1.8E-30 6.2E-35 224.4 20.9 235 2-271 85-363 (437)
89 1r5m_A SIR4-interacting protei 100.0 7.6E-30 2.6E-34 219.0 24.2 231 2-266 129-424 (425)
90 3mkq_A Coatomer beta'-subunit; 100.0 7.5E-30 2.6E-34 236.8 25.4 222 2-269 34-261 (814)
91 3jro_A Fusion protein of prote 100.0 3E-30 1E-34 237.1 22.1 236 31-300 6-286 (753)
92 2ovr_B FBW7, F-BOX/WD repeat p 100.0 3.4E-29 1.2E-33 217.0 27.3 243 2-301 138-393 (445)
93 3jro_A Fusion protein of prote 100.0 1.6E-29 5.5E-34 232.3 26.6 226 2-268 30-286 (753)
94 2ovr_B FBW7, F-BOX/WD repeat p 100.0 4.4E-29 1.5E-33 216.3 27.7 242 2-300 178-443 (445)
95 4aez_A CDC20, WD repeat-contai 100.0 7.9E-30 2.7E-34 218.0 22.6 221 2-271 155-384 (401)
96 3sfz_A APAF-1, apoptotic pepti 100.0 1.9E-30 6.4E-35 251.0 20.8 247 2-298 982-1248(1249)
97 4a11_B DNA excision repair pro 100.0 1.1E-28 3.6E-33 210.9 29.1 234 2-271 65-369 (408)
98 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.2E-28 4.3E-33 213.7 29.1 201 32-265 100-337 (450)
99 1yfq_A Cell cycle arrest prote 100.0 7E-29 2.4E-33 207.3 24.8 220 2-270 32-285 (342)
100 3v7d_B Cell division control p 100.0 6.1E-29 2.1E-33 216.4 25.2 233 2-271 182-425 (464)
101 4h5i_A Guanine nucleotide-exch 100.0 2.4E-29 8.1E-34 212.2 21.7 183 2-226 156-344 (365)
102 4gq1_A NUP37; propeller, trans 100.0 9.1E-30 3.1E-34 217.0 19.3 239 2-266 110-388 (393)
103 2aq5_A Coronin-1A; WD40 repeat 100.0 1.1E-28 3.7E-33 211.0 25.9 243 36-301 36-301 (402)
104 1pgu_A Actin interacting prote 100.0 8.8E-29 3E-33 222.5 26.1 266 2-299 182-614 (615)
105 2w18_A PALB2, fancn, partner a 100.0 6.7E-29 2.3E-33 201.5 22.1 211 33-265 110-355 (356)
106 1yfq_A Cell cycle arrest prote 100.0 6.4E-29 2.2E-33 207.5 21.0 232 32-301 9-284 (342)
107 3mmy_A MRNA export factor; mRN 100.0 1.5E-28 5.2E-33 206.9 21.4 235 2-266 63-345 (368)
108 1p22_A F-BOX/WD-repeat protein 100.0 1.7E-28 5.8E-33 212.0 21.7 215 2-270 192-417 (435)
109 3odt_A Protein DOA1; ubiquitin 100.0 8.7E-28 3E-32 198.0 25.0 230 31-301 15-257 (313)
110 3vu4_A KMHSV2; beta-propeller 100.0 2.3E-28 7.7E-33 205.5 21.6 242 32-301 17-338 (355)
111 4gga_A P55CDC, cell division c 100.0 1.7E-27 5.7E-32 204.8 27.4 223 2-269 168-397 (420)
112 2oaj_A Protein SNI1; WD40 repe 100.0 1.4E-27 4.7E-32 222.7 27.2 261 2-300 78-520 (902)
113 2vdu_B TRNA (guanine-N(7)-)-me 100.0 6.5E-28 2.2E-32 209.2 22.6 243 34-297 4-337 (450)
114 2j04_A TAU60, YPL007P, hypothe 100.0 3.1E-29 1E-33 216.1 13.9 220 32-297 83-319 (588)
115 2j04_A TAU60, YPL007P, hypothe 100.0 1.3E-27 4.5E-32 206.0 23.3 227 34-291 15-290 (588)
116 2oaj_A Protein SNI1; WD40 repe 100.0 2.1E-28 7.3E-33 228.1 19.8 198 32-269 15-244 (902)
117 3mmy_A MRNA export factor; mRN 100.0 1.6E-27 5.3E-32 200.8 23.0 207 31-270 36-307 (368)
118 4gq1_A NUP37; propeller, trans 100.0 3.8E-28 1.3E-32 207.0 18.6 228 34-291 89-382 (393)
119 1l0q_A Surface layer protein; 100.0 1.1E-26 3.7E-31 197.7 27.5 250 2-301 11-277 (391)
120 3lrv_A PRE-mRNA-splicing facto 100.0 2.4E-27 8.2E-32 198.4 21.8 196 32-266 123-332 (343)
121 3vu4_A KMHSV2; beta-propeller 100.0 4.2E-26 1.4E-30 191.7 28.9 232 4-269 41-338 (355)
122 2w18_A PALB2, fancn, partner a 100.0 1.9E-27 6.6E-32 193.1 18.6 175 2-223 156-355 (356)
123 4ggc_A P55CDC, cell division c 100.0 1.8E-25 6E-30 184.7 27.1 222 2-268 88-316 (318)
124 3bws_A Protein LP49; two-domai 99.9 6.1E-26 2.1E-30 195.7 22.9 253 2-298 143-431 (433)
125 1l0q_A Surface layer protein; 99.9 1.1E-24 3.8E-29 185.3 28.4 217 2-269 53-277 (391)
126 3bws_A Protein LP49; two-domai 99.9 2.1E-24 7.3E-29 186.0 23.5 235 35-301 123-392 (433)
127 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.5E-24 5E-29 186.0 22.2 264 4-315 94-405 (415)
128 2hqs_A Protein TOLB; TOLB, PAL 99.9 5.5E-23 1.9E-27 176.2 28.0 214 3-268 159-388 (415)
129 2ojh_A Uncharacterized protein 99.9 1.3E-21 4.3E-26 159.5 26.8 220 2-272 21-263 (297)
130 2oit_A Nucleoporin 214KDA; NH2 99.9 3.4E-22 1.2E-26 171.9 18.2 223 34-268 36-279 (434)
131 3vgz_A Uncharacterized protein 99.9 2.4E-20 8.3E-25 156.1 27.2 259 2-300 68-336 (353)
132 3u4y_A Uncharacterized protein 99.9 8.8E-21 3E-25 157.5 24.1 252 2-301 19-306 (331)
133 1nir_A Nitrite reductase; hemo 99.9 2E-20 6.9E-25 165.2 25.4 252 2-302 158-461 (543)
134 2oit_A Nucleoporin 214KDA; NH2 99.9 4E-20 1.4E-24 159.1 23.6 169 33-226 91-279 (434)
135 1ri6_A Putative isomerase YBHE 99.9 1.1E-19 3.8E-24 151.3 23.3 254 2-298 14-307 (343)
136 1pby_B Quinohemoprotein amine 99.9 7.1E-20 2.4E-24 152.1 21.2 224 2-271 10-314 (337)
137 1xfd_A DIP, dipeptidyl aminope 99.9 1.4E-20 4.7E-25 172.6 18.1 224 2-264 36-341 (723)
138 1nir_A Nitrite reductase; hemo 99.9 3.5E-19 1.2E-23 157.3 26.2 260 2-301 199-516 (543)
139 2ecf_A Dipeptidyl peptidase IV 99.8 7.5E-20 2.6E-24 168.1 21.2 212 34-269 36-323 (741)
140 1jmx_B Amine dehydrogenase; ox 99.8 1.8E-19 6.3E-24 150.4 19.5 222 2-271 20-329 (349)
141 2ecf_A Dipeptidyl peptidase IV 99.8 1.4E-19 4.8E-24 166.3 20.4 226 4-266 65-366 (741)
142 2z3z_A Dipeptidyl aminopeptida 99.8 1.8E-19 6.3E-24 164.7 19.9 264 3-301 101-437 (706)
143 2ojh_A Uncharacterized protein 99.8 2.4E-19 8.3E-24 145.9 17.6 209 2-257 61-292 (297)
144 2z3z_A Dipeptidyl aminopeptida 99.8 3.5E-19 1.2E-23 162.8 19.0 259 5-301 46-393 (706)
145 1xfd_A DIP, dipeptidyl aminope 99.8 3.6E-18 1.2E-22 156.5 22.2 223 2-267 90-393 (723)
146 1z68_A Fibroblast activation p 99.8 4.8E-19 1.6E-23 162.3 14.9 234 2-268 35-347 (719)
147 3vgz_A Uncharacterized protein 99.8 2.4E-17 8.2E-22 137.8 23.3 233 34-301 40-305 (353)
148 1k32_A Tricorn protease; prote 99.8 1.3E-18 4.4E-23 165.5 17.2 193 33-265 294-500 (1045)
149 1ri6_A Putative isomerase YBHE 99.8 1.7E-17 5.7E-22 138.1 21.1 221 3-267 60-308 (343)
150 1k32_A Tricorn protease; prote 99.8 2E-17 6.7E-22 157.4 23.4 247 3-301 317-639 (1045)
151 3u4y_A Uncharacterized protein 99.8 9E-17 3.1E-21 133.3 24.6 226 40-302 3-255 (331)
152 3hfq_A Uncharacterized protein 99.8 1.2E-16 4E-21 133.6 25.2 230 2-267 62-317 (347)
153 3o4h_A Acylamino-acid-releasin 99.8 5.9E-18 2E-22 151.4 17.9 211 2-265 43-274 (582)
154 3o4h_A Acylamino-acid-releasin 99.8 1.4E-17 4.9E-22 148.8 18.8 222 34-297 21-274 (582)
155 3hfq_A Uncharacterized protein 99.8 1.6E-16 5.4E-21 132.8 23.9 235 34-297 39-315 (347)
156 1jmx_B Amine dehydrogenase; ox 99.8 4.4E-17 1.5E-21 135.9 19.4 225 39-301 4-327 (349)
157 4a5s_A Dipeptidyl peptidase 4 99.8 5.9E-17 2E-21 148.8 21.9 236 2-268 35-354 (740)
158 1pby_B Quinohemoprotein amine 99.8 1.9E-16 6.6E-21 131.3 21.8 218 48-301 2-312 (337)
159 3scy_A Hypothetical bacterial 99.7 6.2E-15 2.1E-19 123.8 29.1 254 3-297 27-335 (361)
160 1z68_A Fibroblast activation p 99.7 1.2E-16 4E-21 146.5 18.2 225 2-267 89-391 (719)
161 4a5s_A Dipeptidyl peptidase 4 99.7 3.8E-16 1.3E-20 143.4 20.9 195 35-269 17-296 (740)
162 3scy_A Hypothetical bacterial 99.7 1E-14 3.4E-19 122.5 28.0 238 3-267 75-337 (361)
163 3pe7_A Oligogalacturonate lyas 99.7 1.8E-15 6.2E-20 128.2 21.6 226 40-301 41-331 (388)
164 1jof_A Carboxy-CIS,CIS-muconat 99.7 8.5E-15 2.9E-19 123.2 23.6 233 35-300 40-342 (365)
165 1q7f_A NHL, brain tumor CG1071 99.7 1.5E-14 5E-19 117.5 24.2 223 3-268 51-281 (286)
166 1jof_A Carboxy-CIS,CIS-muconat 99.7 2.6E-15 8.9E-20 126.4 20.0 223 4-268 61-342 (365)
167 3fvz_A Peptidyl-glycine alpha- 99.7 2.3E-14 7.9E-19 118.8 24.4 203 34-271 23-281 (329)
168 3azo_A Aminopeptidase; POP fam 99.7 1.3E-14 4.5E-19 131.6 23.6 191 39-266 81-322 (662)
169 3fvz_A Peptidyl-glycine alpha- 99.7 1.2E-14 4E-19 120.6 20.9 228 3-268 69-323 (329)
170 3pe7_A Oligogalacturonate lyas 99.7 2.2E-15 7.5E-20 127.7 16.3 219 4-270 61-332 (388)
171 1q7f_A NHL, brain tumor CG1071 99.7 1.2E-13 4.1E-18 112.0 25.7 204 31-266 26-237 (286)
172 3azo_A Aminopeptidase; POP fam 99.6 4E-14 1.4E-18 128.5 18.1 200 33-266 128-366 (662)
173 2gop_A Trilobed protease; beta 99.6 2.6E-13 9E-18 113.1 21.4 202 2-268 42-292 (347)
174 3c5m_A Oligogalacturonate lyas 99.6 1.7E-14 5.8E-19 122.4 13.3 230 36-301 37-331 (396)
175 3e5z_A Putative gluconolactona 99.6 4.8E-13 1.6E-17 109.1 21.4 207 3-258 50-278 (296)
176 1rwi_B Serine/threonine-protei 99.6 6.8E-13 2.3E-17 106.6 21.8 198 35-269 67-266 (270)
177 3dsm_A Uncharacterized protein 99.6 2.2E-12 7.5E-17 106.8 24.9 222 2-271 63-305 (328)
178 2oiz_A Aromatic amine dehydrog 99.6 1.2E-13 4E-18 116.0 16.9 224 2-268 30-335 (361)
179 3c5m_A Oligogalacturonate lyas 99.6 3.1E-14 1.1E-18 120.7 13.0 192 39-270 85-332 (396)
180 2dg1_A DRP35, lactonase; beta 99.6 5.4E-12 1.8E-16 104.6 25.7 198 33-266 43-262 (333)
181 1rwi_B Serine/threonine-protei 99.6 1.7E-12 5.7E-17 104.2 21.9 197 36-268 25-223 (270)
182 2xdw_A Prolyl endopeptidase; a 99.5 2.4E-12 8.3E-17 117.7 23.9 235 32-301 122-416 (710)
183 2bkl_A Prolyl endopeptidase; m 99.5 2.1E-12 7.3E-17 117.7 23.2 200 32-266 118-348 (695)
184 3no2_A Uncharacterized protein 99.5 2.6E-12 8.9E-17 103.5 19.2 185 48-270 6-198 (276)
185 1xip_A Nucleoporin NUP159; bet 99.5 9.3E-13 3.2E-17 110.1 16.8 183 36-256 39-233 (388)
186 2dg1_A DRP35, lactonase; beta 99.5 1.8E-11 6.2E-16 101.3 24.7 178 3-226 66-264 (333)
187 3no2_A Uncharacterized protein 99.5 8E-12 2.7E-16 100.7 20.9 178 2-227 14-197 (276)
188 2xdw_A Prolyl endopeptidase; a 99.5 1E-11 3.5E-16 113.6 24.2 222 4-269 152-416 (710)
189 2z2n_A Virginiamycin B lyase; 99.5 2.4E-10 8.1E-15 92.9 27.9 196 34-268 14-213 (299)
190 2z2n_A Virginiamycin B lyase; 99.4 2.6E-10 8.8E-15 92.6 27.4 194 34-265 56-253 (299)
191 3e5z_A Putative gluconolactona 99.4 1.3E-11 4.3E-16 100.6 19.5 194 34-266 27-245 (296)
192 1qks_A Cytochrome CD1 nitrite 99.4 2.4E-10 8.3E-15 101.0 28.6 217 2-267 176-421 (567)
193 2oiz_A Aromatic amine dehydrog 99.4 3.4E-11 1.2E-15 101.0 21.2 198 3-226 81-335 (361)
194 2gop_A Trilobed protease; beta 99.4 5.2E-12 1.8E-16 105.2 15.9 200 4-266 86-330 (347)
195 3dsm_A Uncharacterized protein 99.4 2.3E-11 7.9E-16 100.7 18.4 250 2-296 16-285 (328)
196 1pjx_A Dfpase, DIISOPROPYLFLUO 99.4 3E-10 1E-14 93.1 23.8 224 3-268 46-300 (314)
197 1yr2_A Prolyl oligopeptidase; 99.4 3.7E-11 1.3E-15 110.3 20.3 199 33-266 161-392 (741)
198 2bkl_A Prolyl endopeptidase; m 99.4 2.9E-11 1E-15 110.3 18.9 223 3-271 147-401 (695)
199 3hrp_A Uncharacterized protein 99.4 2.9E-10 9.9E-15 96.9 22.7 197 35-270 131-357 (409)
200 1xip_A Nucleoporin NUP159; bet 99.3 2.3E-11 7.9E-16 101.7 14.9 133 33-211 87-230 (388)
201 2qc5_A Streptogramin B lactona 99.3 4.2E-09 1.4E-13 85.5 27.1 194 34-265 61-258 (300)
202 1pjx_A Dfpase, DIISOPROPYLFLUO 99.3 8.7E-10 3E-14 90.3 22.1 201 36-269 19-258 (314)
203 2qc5_A Streptogramin B lactona 99.3 8.4E-09 2.9E-13 83.7 27.2 194 34-265 19-216 (300)
204 3g4e_A Regucalcin; six bladed 99.3 3.8E-09 1.3E-13 86.0 23.7 176 34-242 53-247 (297)
205 3g4e_A Regucalcin; six bladed 99.3 2.9E-09 9.7E-14 86.7 22.8 226 36-300 14-264 (297)
206 3hrp_A Uncharacterized protein 99.3 1.1E-09 3.8E-14 93.2 20.8 181 3-228 152-357 (409)
207 1qks_A Cytochrome CD1 nitrite 99.2 2.3E-09 8E-14 94.7 22.7 190 43-271 164-377 (567)
208 2ghs_A AGR_C_1268P; regucalcin 99.2 6.2E-09 2.1E-13 85.9 23.3 223 37-300 51-294 (326)
209 1yr2_A Prolyl oligopeptidase; 99.2 1.4E-09 4.6E-14 100.0 20.4 221 3-269 189-443 (741)
210 2ghs_A AGR_C_1268P; regucalcin 99.2 1.1E-08 3.8E-13 84.4 22.1 154 35-225 90-260 (326)
211 2mad_H Methylamine dehydrogena 99.1 9.6E-08 3.3E-12 80.2 26.6 252 4-302 48-353 (373)
212 3sjl_D Methylamine dehydrogena 99.1 2.5E-08 8.5E-13 83.2 22.6 219 40-297 38-299 (386)
213 3sjl_D Methylamine dehydrogena 99.1 1.7E-08 5.8E-13 84.2 21.3 255 1-301 57-365 (386)
214 3iuj_A Prolyl endopeptidase; h 99.1 9.2E-09 3.2E-13 93.7 21.2 221 3-270 155-408 (693)
215 3iuj_A Prolyl endopeptidase; h 99.1 2E-09 6.9E-14 98.1 16.3 199 32-267 126-359 (693)
216 2hz6_A Endoplasmic reticulum t 99.1 3.8E-11 1.3E-15 101.0 4.4 181 48-270 10-195 (369)
217 2qe8_A Uncharacterized protein 99.1 1.5E-08 5.1E-13 84.2 18.6 234 36-299 18-311 (343)
218 3dr2_A Exported gluconolactona 99.0 3.4E-08 1.2E-12 80.7 19.2 189 34-260 85-300 (305)
219 3dr2_A Exported gluconolactona 99.0 3.3E-08 1.1E-12 80.7 18.9 154 35-226 45-225 (305)
220 2mad_H Methylamine dehydrogena 99.0 6.7E-07 2.3E-11 75.1 24.9 187 41-268 27-244 (373)
221 3c75_H MADH, methylamine dehyd 98.9 9.1E-08 3.1E-12 81.1 18.2 255 3-302 99-405 (426)
222 2qe8_A Uncharacterized protein 98.9 5.8E-08 2E-12 80.7 15.4 185 32-227 64-280 (343)
223 1npe_A Nidogen, entactin; glyc 98.9 4.4E-06 1.5E-10 66.6 25.8 198 36-270 37-241 (267)
224 2hz6_A Endoplasmic reticulum t 98.9 3.1E-10 1.1E-14 95.3 1.1 174 2-227 18-194 (369)
225 3c75_H MADH, methylamine dehyd 98.9 3.2E-07 1.1E-11 77.9 19.2 174 57-268 99-296 (426)
226 2iwa_A Glutamine cyclotransfer 98.9 6.1E-07 2.1E-11 70.9 19.3 195 36-268 22-238 (266)
227 2ece_A 462AA long hypothetical 98.8 4.9E-06 1.7E-10 70.2 25.2 192 2-224 105-351 (462)
228 2ece_A 462AA long hypothetical 98.8 5.3E-06 1.8E-10 70.0 25.0 202 44-268 93-353 (462)
229 1mda_H Methylamine dehydrogena 98.8 1.5E-07 5.1E-12 78.5 14.5 74 157-232 269-354 (368)
230 1yiq_A Quinohemoprotein alcoho 98.7 4.6E-07 1.6E-11 82.3 17.0 241 2-271 130-509 (689)
231 1kb0_A Quinohemoprotein alcoho 98.7 6.2E-07 2.1E-11 81.3 16.0 241 2-271 137-511 (677)
232 1kb0_A Quinohemoprotein alcoho 98.7 1.3E-06 4.5E-11 79.1 17.3 53 174-227 457-509 (677)
233 2iwa_A Glutamine cyclotransfer 98.6 2.2E-06 7.6E-11 67.7 16.2 178 3-227 44-239 (266)
234 3q7m_A Lipoprotein YFGL, BAMB; 98.6 5.7E-05 2E-09 63.3 24.8 220 2-271 112-341 (376)
235 3nol_A Glutamine cyclotransfer 98.6 6.4E-05 2.2E-09 58.8 22.1 150 37-227 45-203 (262)
236 3nol_A Glutamine cyclotransfer 98.6 3.4E-06 1.1E-10 66.0 14.9 165 3-215 65-245 (262)
237 3q7m_A Lipoprotein YFGL, BAMB; 98.6 1.2E-05 4.2E-10 67.4 19.7 223 48-301 54-298 (376)
238 1fwx_A Nitrous oxide reductase 98.5 2.7E-06 9.4E-11 74.2 15.5 191 3-225 112-361 (595)
239 3nok_A Glutaminyl cyclase; bet 98.5 3E-05 1E-09 60.7 19.7 151 36-227 56-212 (268)
240 1npe_A Nidogen, entactin; glyc 98.5 7.9E-05 2.7E-09 59.2 23.1 156 93-268 36-199 (267)
241 3mbr_X Glutamine cyclotransfer 98.5 2.5E-05 8.7E-10 60.5 18.3 153 35-227 21-181 (243)
242 3hxj_A Pyrrolo-quinoline quino 98.5 3.7E-06 1.3E-10 69.0 14.7 187 36-267 138-324 (330)
243 3nok_A Glutaminyl cyclase; bet 98.5 1.4E-05 4.9E-10 62.5 16.9 161 2-213 74-253 (268)
244 1yiq_A Quinohemoprotein alcoho 98.5 8E-06 2.7E-10 74.2 17.8 54 173-227 454-507 (689)
245 1ijq_A LDL receptor, low-densi 98.5 0.00031 1.1E-08 57.4 25.4 222 3-269 10-240 (316)
246 3hxj_A Pyrrolo-quinoline quino 98.5 6.1E-06 2.1E-10 67.7 15.3 174 49-265 109-282 (330)
247 2xe4_A Oligopeptidase B; hydro 98.5 2.4E-05 8.3E-10 71.9 20.6 194 36-265 175-396 (751)
248 3sov_A LRP-6, low-density lipo 98.5 0.00014 4.7E-09 59.5 22.9 221 3-270 13-241 (318)
249 1mda_H Methylamine dehydrogena 98.5 8.3E-06 2.8E-10 68.0 15.6 102 48-183 33-158 (368)
250 2fp8_A Strictosidine synthase; 98.4 6.2E-05 2.1E-09 61.7 19.8 170 36-226 20-217 (322)
251 3mbr_X Glutamine cyclotransfer 98.4 3.1E-05 1.1E-09 60.0 16.7 164 3-214 43-223 (243)
252 1fwx_A Nitrous oxide reductase 98.4 3.1E-05 1E-09 67.7 17.7 186 44-267 99-361 (595)
253 3qqz_A Putative uncharacterize 98.4 0.00041 1.4E-08 54.4 22.5 168 34-226 26-205 (255)
254 3v64_C Agrin; beta propeller, 98.4 0.00039 1.3E-08 57.7 23.5 196 36-268 74-276 (349)
255 3v65_B Low-density lipoprotein 98.3 0.00028 9.7E-09 59.4 22.8 197 36-268 117-319 (386)
256 2fp8_A Strictosidine synthase; 98.3 0.00011 3.6E-09 60.3 19.2 197 36-268 81-314 (322)
257 1k3i_A Galactose oxidase precu 98.3 2.1E-05 7.2E-10 71.2 16.2 224 4-268 220-498 (656)
258 3p5b_L Low density lipoprotein 98.3 0.00061 2.1E-08 57.6 23.2 202 35-268 112-321 (400)
259 2p4o_A Hypothetical protein; p 98.2 0.00065 2.2E-08 55.1 22.1 223 36-298 33-278 (306)
260 1kv9_A Type II quinohemoprotei 98.2 3.1E-05 1E-09 70.2 15.0 107 163-271 310-492 (668)
261 4hw6_A Hypothetical protein, I 98.2 0.00071 2.4E-08 57.8 21.7 153 36-224 140-303 (433)
262 4a2l_A BT_4663, two-component 98.2 0.0012 4.3E-08 61.0 24.6 200 34-268 309-527 (795)
263 2p9w_A MAL S 1 allergenic prot 98.1 0.002 7E-08 52.1 23.8 160 38-225 16-215 (334)
264 3v64_C Agrin; beta propeller, 98.1 0.0026 9E-08 52.6 25.8 195 36-269 35-236 (349)
265 2ad6_A Methanol dehydrogenase 98.1 0.00026 8.8E-09 62.9 17.8 108 162-271 311-498 (571)
266 4a0p_A LRP6, LRP-6, low-densit 98.0 0.0047 1.6E-07 55.4 25.2 196 36-269 38-239 (628)
267 3v65_B Low-density lipoprotein 98.0 0.004 1.4E-07 52.3 23.3 192 38-268 80-278 (386)
268 3m0c_C LDL receptor, low-densi 98.0 0.0026 8.9E-08 58.5 23.5 202 35-268 424-633 (791)
269 4a2l_A BT_4663, two-component 98.0 0.0042 1.4E-07 57.5 24.8 201 34-267 262-480 (795)
270 1kv9_A Type II quinohemoprotei 97.9 0.00033 1.1E-08 63.5 15.9 54 173-227 437-490 (668)
271 3s94_A LRP-6, low-density lipo 97.9 0.0078 2.7E-07 53.9 24.2 198 36-269 41-245 (619)
272 3v9f_A Two-component system se 97.9 0.004 1.4E-07 57.6 22.9 198 34-268 362-569 (781)
273 3v9f_A Two-component system se 97.9 0.013 4.4E-07 54.1 26.3 208 34-268 257-479 (781)
274 1n7d_A LDL receptor, low-densi 97.9 3.8E-05 1.3E-09 69.8 9.0 200 36-268 407-615 (699)
275 4a0p_A LRP6, LRP-6, low-densit 97.9 0.012 4E-07 52.9 24.7 183 55-270 13-200 (628)
276 1k3i_A Galactose oxidase precu 97.9 0.00044 1.5E-08 62.5 15.6 157 39-227 190-380 (656)
277 1w6s_A Methanol dehydrogenase 97.9 0.0013 4.6E-08 58.5 18.3 135 162-299 318-536 (599)
278 2xe4_A Oligopeptidase B; hydro 97.8 0.0015 5.1E-08 60.0 18.6 112 94-226 175-305 (751)
279 3tc9_A Hypothetical hydrolase; 97.8 0.0017 5.8E-08 55.4 17.6 154 36-225 138-301 (430)
280 3sov_A LRP-6, low-density lipo 97.8 0.0092 3.1E-07 48.6 21.8 156 36-227 80-240 (318)
281 3tc9_A Hypothetical hydrolase; 97.8 0.0059 2E-07 52.1 20.1 70 95-182 228-300 (430)
282 1flg_A Protein (quinoprotein e 97.8 0.0044 1.5E-07 55.1 19.7 135 162-299 331-549 (582)
283 3p5b_L Low density lipoprotein 97.7 0.015 5.3E-07 49.0 24.9 185 55-270 90-280 (400)
284 4hw6_A Hypothetical protein, I 97.7 0.0042 1.4E-07 53.0 18.3 113 95-224 230-373 (433)
285 1ijq_A LDL receptor, low-densi 97.6 0.017 5.8E-07 47.0 24.9 181 57-269 10-197 (316)
286 2ad6_A Methanol dehydrogenase 97.6 0.0021 7.2E-08 57.0 15.8 54 173-227 443-496 (571)
287 3m0c_C LDL receptor, low-densi 97.6 0.032 1.1E-06 51.4 23.5 164 92-270 423-592 (791)
288 3kya_A Putative phosphatase; s 97.6 0.0078 2.7E-07 51.9 17.5 162 36-224 140-340 (496)
289 2xbg_A YCF48-like protein; pho 97.5 0.015 5.2E-07 47.5 18.0 154 33-223 161-320 (327)
290 1n7d_A LDL receptor, low-densi 97.5 0.003 1E-07 57.5 14.9 159 94-268 407-572 (699)
291 2p4o_A Hypothetical protein; p 97.5 0.029 9.8E-07 45.3 21.8 164 35-225 72-242 (306)
292 1w6s_A Methanol dehydrogenase 97.3 0.012 3.9E-07 52.5 16.5 55 172-227 451-505 (599)
293 3pbp_A Nucleoporin NUP82; beta 97.3 0.024 8.2E-07 47.5 16.7 134 36-180 67-209 (452)
294 1flg_A Protein (quinoprotein e 97.3 0.013 4.3E-07 52.1 15.9 54 173-227 465-518 (582)
295 2xzh_A Clathrin heavy chain 1; 97.2 0.058 2E-06 43.6 23.3 224 3-271 87-336 (365)
296 3qqz_A Putative uncharacterize 97.2 0.05 1.7E-06 42.5 23.5 167 35-223 70-251 (255)
297 2vpj_A Kelch-like protein 12; 97.2 0.025 8.5E-07 45.4 15.6 104 163-268 159-279 (301)
298 1bpo_A Protein (clathrin); cla 97.2 0.088 3E-06 44.3 22.7 223 3-271 86-335 (494)
299 1tl2_A L10, protein (tachylect 97.1 0.023 7.9E-07 43.1 13.3 153 36-218 42-203 (236)
300 3amr_A 3-phytase; beta-propell 97.1 0.09 3.1E-06 43.0 17.9 118 94-224 129-262 (355)
301 2xbg_A YCF48-like protein; pho 97.1 0.089 3E-06 42.9 21.5 189 34-263 121-318 (327)
302 3s94_A LRP-6, low-density lipo 97.1 0.12 4E-06 46.3 20.1 157 35-227 84-245 (619)
303 3sre_A PON1, serum paraoxonase 97.0 0.081 2.8E-06 43.6 17.1 164 36-225 51-252 (355)
304 3kya_A Putative phosphatase; s 96.9 0.16 5.5E-06 43.8 21.2 123 95-224 249-409 (496)
305 2vpj_A Kelch-like protein 12; 96.9 0.1 3.6E-06 41.7 16.9 104 163-268 112-232 (301)
306 3ii7_A Kelch-like protein 7; p 96.9 0.058 2E-06 43.4 15.4 185 48-268 57-273 (306)
307 3pbp_A Nucleoporin NUP82; beta 96.8 0.12 4.2E-06 43.3 16.2 108 100-225 28-158 (452)
308 1xi4_A Clathrin heavy chain; a 96.7 0.15 5.1E-06 49.6 18.4 227 3-274 86-338 (1630)
309 2xn4_A Kelch-like protein 2; s 96.7 0.075 2.6E-06 42.6 14.6 63 163-227 155-231 (302)
310 1zgk_A Kelch-like ECH-associat 96.7 0.12 4E-06 41.7 15.7 63 163-227 168-242 (308)
311 2p9w_A MAL S 1 allergenic prot 96.7 0.056 1.9E-06 43.8 13.2 156 95-267 15-215 (334)
312 3ei3_A DNA damage-binding prot 96.6 0.11 3.8E-06 50.0 17.0 176 3-225 807-999 (1158)
313 3ii7_A Kelch-like protein 7; p 96.5 0.15 5.3E-06 40.8 15.1 185 48-268 13-226 (306)
314 4asc_A Kelch repeat and BTB do 96.4 0.13 4.4E-06 41.5 14.6 104 163-268 98-222 (315)
315 1zgk_A Kelch-like ECH-associat 96.2 0.31 1.1E-05 39.1 15.7 104 163-268 121-241 (308)
316 2ism_A Putative oxidoreductase 96.1 0.47 1.6E-05 39.0 23.3 151 36-213 32-221 (352)
317 1cru_A Protein (soluble quinop 96.1 0.46 1.6E-05 40.7 16.6 117 36-171 28-162 (454)
318 2xzh_A Clathrin heavy chain 1; 96.1 0.44 1.5E-05 38.6 21.1 193 3-227 126-334 (365)
319 2xn4_A Kelch-like protein 2; s 96.1 0.42 1.4E-05 38.2 16.7 104 163-268 108-230 (302)
320 1tl2_A L10, protein (tachylect 96.1 0.33 1.1E-05 36.9 15.3 112 94-222 42-160 (236)
321 3das_A Putative oxidoreductase 96.0 0.49 1.7E-05 38.8 16.4 158 36-212 33-219 (347)
322 4asc_A Kelch repeat and BTB do 96.0 0.45 1.5E-05 38.3 16.8 63 163-227 148-223 (315)
323 2ism_A Putative oxidoreductase 95.8 0.45 1.5E-05 39.2 15.0 101 94-213 32-153 (352)
324 2woz_A Kelch repeat and BTB do 95.8 0.59 2E-05 37.6 17.3 63 163-227 158-233 (318)
325 2woz_A Kelch repeat and BTB do 95.8 0.33 1.1E-05 39.1 14.0 63 163-227 109-186 (318)
326 3a9g_A Putative uncharacterize 95.2 0.93 3.2E-05 37.3 14.9 102 94-213 30-153 (354)
327 3sre_A PON1, serum paraoxonase 95.2 1.1 3.7E-05 36.9 17.7 185 2-224 82-297 (355)
328 1xi4_A Clathrin heavy chain; a 95.1 0.95 3.3E-05 44.3 15.8 149 97-267 70-235 (1630)
329 3a9g_A Putative uncharacterize 94.8 0.8 2.7E-05 37.7 13.4 70 154-226 31-115 (354)
330 2be1_A Serine/threonine-protei 94.8 0.23 8E-06 40.5 9.9 145 48-222 11-181 (339)
331 1bpo_A Protein (clathrin); cla 94.8 1.6 5.6E-05 36.9 24.0 193 3-227 125-333 (494)
332 2g8s_A Glucose/sorbosone dehyd 94.6 1.4 4.8E-05 36.2 14.4 153 36-211 19-214 (353)
333 3amr_A 3-phytase; beta-propell 94.5 1.6 5.6E-05 35.7 22.9 185 48-266 41-262 (355)
334 2g8s_A Glucose/sorbosone dehyd 94.0 2.1 7.3E-05 35.1 14.4 107 94-213 19-148 (353)
335 2uvk_A YJHT; unknown function, 93.2 1.8 6.2E-05 35.4 12.6 51 175-227 286-344 (357)
336 3ott_A Two-component system se 92.4 6.5 0.00022 36.0 22.8 190 35-268 63-261 (758)
337 2zwa_A Leucine carboxyl methyl 91.4 8 0.00027 35.1 17.0 148 45-227 451-637 (695)
338 3s25_A Hypothetical 7-bladed b 91.2 4.8 0.00016 32.2 20.2 137 99-268 110-256 (302)
339 3ott_A Two-component system se 91.2 8.9 0.0003 35.1 24.1 171 35-230 373-550 (758)
340 3das_A Putative oxidoreductase 89.7 7.4 0.00025 31.8 14.5 71 154-225 34-116 (347)
341 3sbq_A Nitrous-oxide reductase 88.4 11 0.00037 33.2 12.6 111 95-213 325-453 (638)
342 2uvk_A YJHT; unknown function, 88.1 9.4 0.00032 31.0 14.8 53 174-227 168-230 (357)
343 1cru_A Protein (soluble quinop 86.8 14 0.00047 31.5 18.2 105 94-213 28-162 (454)
344 2wg3_C Hedgehog-interacting pr 86.3 15 0.00051 31.4 14.4 28 94-121 15-44 (463)
345 2zwa_A Leucine carboxyl methyl 86.2 13 0.00046 33.6 12.9 25 45-70 500-526 (695)
346 4gq2_M Nucleoporin NUP120; bet 84.7 11 0.00039 35.5 12.0 38 153-191 237-274 (950)
347 2be1_A Serine/threonine-protei 83.6 0.84 2.9E-05 37.3 3.5 107 164-271 10-134 (339)
348 4gq2_M Nucleoporin NUP120; bet 79.4 43 0.0015 31.7 14.8 32 196-227 237-268 (950)
349 3ei3_A DNA damage-binding prot 78.4 51 0.0018 32.0 24.6 118 35-187 514-642 (1158)
350 4fhn_B Nucleoporin NUP120; pro 76.9 13 0.00046 35.9 9.8 37 154-191 240-276 (1139)
351 3qhy_B Beta-lactamase inhibito 76.7 25 0.00087 27.6 17.8 182 36-268 64-247 (282)
352 2wg3_C Hedgehog-interacting pr 76.3 36 0.0012 29.1 15.3 124 36-173 15-159 (463)
353 3qhy_B Beta-lactamase inhibito 74.7 29 0.00098 27.3 17.7 182 36-268 25-208 (282)
354 3s25_A Hypothetical 7-bladed b 73.1 33 0.0011 27.2 14.5 99 160-268 60-177 (302)
355 3f7f_A Nucleoporin NUP120; nuc 73.0 25 0.00086 31.9 9.7 36 154-192 224-259 (729)
356 3sbq_A Nitrous-oxide reductase 71.5 28 0.00096 30.7 9.3 81 36-122 324-408 (638)
357 3zwu_A Alkaline phosphatase PH 70.6 23 0.00078 31.4 8.9 58 154-212 478-548 (592)
358 3q6k_A 43.2 kDa salivary prote 65.5 57 0.002 27.0 19.4 155 4-183 124-306 (381)
359 4a9v_A PHOX; hydrolase, beta-p 61.3 62 0.0021 28.6 9.5 58 154-212 478-548 (592)
360 3q6k_A 43.2 kDa salivary prote 59.1 76 0.0026 26.3 14.6 178 33-225 85-306 (381)
361 3zwu_A Alkaline phosphatase PH 53.4 51 0.0017 29.2 7.9 59 94-170 477-548 (592)
362 4a9v_A PHOX; hydrolase, beta-p 52.5 78 0.0027 27.9 8.7 61 93-171 476-549 (592)
363 4fhn_B Nucleoporin NUP120; pro 49.7 47 0.0016 32.1 7.8 32 196-227 239-270 (1139)
364 3f7f_A Nucleoporin NUP120; nuc 35.9 46 0.0016 30.3 4.8 35 35-72 222-256 (729)
365 1q47_A Semaphorin 3A; beta pro 31.5 1.5E+02 0.005 25.6 7.2 55 166-220 423-487 (495)
366 3b7f_A Glycosyl hydrolase, BNR 28.6 2.4E+02 0.0081 22.9 18.5 21 93-113 55-77 (394)
367 3b7f_A Glycosyl hydrolase, BNR 27.5 2.5E+02 0.0085 22.8 16.9 67 153-222 178-259 (394)
368 3uc1_A DNA gyrase subunit A; D 26.2 2.5E+02 0.0087 22.5 20.2 169 35-224 95-278 (327)
369 3al9_A Plexin-A2; beta-propell 25.2 1.5E+02 0.0052 25.8 6.3 67 154-220 402-476 (539)
370 1wp5_A Topoisomerase IV; broke 23.8 2.8E+02 0.0096 22.1 20.0 201 44-267 3-225 (323)
371 1xks_A Nuclear pore complex pr 22.3 3.6E+02 0.012 22.9 15.9 106 4-121 58-171 (450)
372 3nvq_A Semaphorin-7A; beta-pro 21.9 2.9E+02 0.01 24.4 7.4 57 165-221 381-445 (590)
373 3aq2_A 6B protein; miRNA machi 20.6 1.5E+02 0.0053 21.3 4.3 27 280-315 163-189 (207)
374 4gz8_A Semaphorin-3A; multi-do 20.3 4.1E+02 0.014 23.9 8.1 56 165-220 430-495 (667)
No 1
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.5e-39 Score=268.57 Aligned_cols=252 Identities=15% Similarity=0.212 Sum_probs=214.7
Q ss_pred CceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCce
Q 021160 1 MVLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVD 80 (316)
Q Consensus 1 ~~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~ 80 (316)
.+|.|+|||++..+....... .||...|.+++|+|++ .++++++.|+.|++||+.+++
T Consensus 56 ~D~~v~vW~~~~~~~~~~~~l---------~gh~~~v~~~~~~~~~-~~l~s~s~D~~i~lWd~~~~~------------ 113 (321)
T 3ow8_A 56 LDDLVKVWKWRDERLDLQWSL---------EGHQLGVVSVDISHTL-PIAASSSLDAHIRLWDLENGK------------ 113 (321)
T ss_dssp TTSCEEEEEEETTEEEEEEEE---------CCCSSCEEEEEECSSS-SEEEEEETTSEEEEEETTTTE------------
T ss_pred CCCCEEEEECCCCCeeeeeee---------ccCCCCEEEEEECCCC-CEEEEEeCCCcEEEEECCCCC------------
Confidence 368999999987654322222 2689999999999998 899999999999999999886
Q ss_pred ecccccccCCCcccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEE
Q 021160 81 TFCPRHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNF 159 (316)
Q Consensus 81 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 159 (316)
+...+ ..|...+.+++|+|++++|+++ .|+.|++|+++.+ +....+..+... +.+++|
T Consensus 114 --~~~~~-~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~----------------~~~~~~~~~~~~--v~~~~~ 172 (321)
T 3ow8_A 114 --QIKSI-DAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESG----------------KKEYSLDTRGKF--ILSIAY 172 (321)
T ss_dssp --EEEEE-ECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTC----------------SEEEEEECSSSC--EEEEEE
T ss_pred --EEEEE-eCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCC----------------ceeEEecCCCce--EEEEEE
Confidence 23333 5567788899999999988885 7999999999887 566777777755 999999
Q ss_pred ecCCCcEEEEeccCCeEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC-CCCCCCCcccc
Q 021160 160 FGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD-FPPLPDNAEKI 238 (316)
Q Consensus 160 ~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~~~~ 238 (316)
+|++++|++|+.|+.|++||+++++++..+.+|...|.+++|+|++++|++++.|+.|++||++... ...+.+|...+
T Consensus 173 -spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v 251 (321)
T 3ow8_A 173 -SPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWV 251 (321)
T ss_dssp -CTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCE
T ss_pred -CCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCce
Confidence 9999999999999999999999999999999999999999999999999999999999999998877 66777888888
Q ss_pred eeeeecCCCCceeEEecCCCeEEEEEecccCcc---------eeE-EeecccccccccCCCCeEEEEec
Q 021160 239 MKANKQGREDHSRITLTPDVIMHVLRLQRRQTL---------AYR-ERRYNAADFESDEEEGETYLLGF 297 (316)
Q Consensus 239 ~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~~~---------~~~-~~~~~~~~~~~~~~~~~v~~~~~ 297 (316)
..+. +++++.++++++.|+.+++||+.++... ++. .+.+++..+.+...++.|.+||.
T Consensus 252 ~~~~-~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 252 LNVA-FCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp EEEE-ECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred EEEE-ECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 7776 7889999999999999999998765322 222 67788888888888999999985
No 2
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=3.8e-39 Score=269.59 Aligned_cols=228 Identities=12% Similarity=0.103 Sum_probs=186.4
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
+|.|+|||+.+.+......... .+|...|++++|+|++ ++|++|+.|++|++||+++++
T Consensus 102 dg~v~lWd~~~~~~~~~~~~~~-------~~H~~~V~~v~~spdg-~~l~sgs~d~~i~iwd~~~~~------------- 160 (344)
T 4gqb_B 102 SGAVELWELDENETLIVSKFCK-------YEHDDIVSTVSVLSSG-TQAVSGSKDICIKVWDLAQQV------------- 160 (344)
T ss_dssp TSEEEEEEECTTSSCEEEEEEE-------ECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTE-------------
T ss_pred CCEEEEEeccCCCceeEeeccc-------cCCCCCEEEEEECCCC-CEEEEEeCCCeEEEEECCCCc-------------
Confidence 6899999999887655544321 1489999999999999 899999999999999999887
Q ss_pred cccccccCCCcccEEEEEEccCCC-eEEE-ecCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEE
Q 021160 82 FCPRHLIGKNNIHITGLAYSNTSE-LLIS-YNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNF 159 (316)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~~~~~~-~l~s-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 159 (316)
+...+ .+|...|.+++|+|++. +|++ +.|++|++||++++ +....+..+.....+.+++|
T Consensus 161 -~~~~~-~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~----------------~~~~~~~~~~~~~~~~~~~~ 222 (344)
T 4gqb_B 161 -VLSSY-RAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCP----------------KPASQIGCSAPGYLPTSLAW 222 (344)
T ss_dssp -EEEEE-CCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSS----------------SCEEECC----CCCEEEEEE
T ss_pred -EEEEE-cCcCCceEEEEecCCCCCceeeecccccccccccccc----------------ceeeeeecceeeccceeeee
Confidence 33333 78999999999999985 6777 47999999999987 55555543333234899999
Q ss_pred ecC-CCcEEEEeccCCeEEEEeccCCeeEEEeecCccceEEEEEcCCC-CeEEEEeCCCcEEEecCCCCCCCCCCCCccc
Q 021160 160 FGP-NDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHI-PMFATCGIEKTVKLWAPMPTDFPPLPDNAEK 237 (316)
Q Consensus 160 ~~~-~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 237 (316)
+| ++.++++|+.||.|++||+++++++..+.+|...|++++|+|++ ++|++++.|++|+|||++.+++..+.+|...
T Consensus 223 -~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~~H~~~ 301 (344)
T 4gqb_B 223 -HPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQAHRDF 301 (344)
T ss_dssp -CSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEECCCSSC
T ss_pred -cCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEEcCCCCC
Confidence 55 67789999999999999999999999999999999999999998 5799999999999999999887778889999
Q ss_pred ceeeeecCCCC-ceeEEecCCCeEEEEEecccCc
Q 021160 238 IMKANKQGRED-HSRITLTPDVIMHVLRLQRRQT 270 (316)
Q Consensus 238 ~~~~~~~~~~~-~~~~s~~~d~~~~~w~~~~~~~ 270 (316)
|..++ |++++ .++++++.|+.|++|++.++..
T Consensus 302 V~~v~-~sp~~~~llas~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 302 VRDAT-WSPLNHSLLTTVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp EEEEE-ECSSSTTEEEEEETTSCEEEEECCC---
T ss_pred EEEEE-EeCCCCeEEEEEcCCCeEEEEECCCCCC
Confidence 87777 67765 4677999999999999987643
No 3
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.6e-38 Score=272.61 Aligned_cols=249 Identities=14% Similarity=0.206 Sum_probs=214.9
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
+|.|+|||+.+.+....+. +|...|.+++|+|++ .+|++|+.|++|++||+.+++
T Consensus 129 Dg~i~vwd~~~~~~~~~l~-----------~h~~~V~~v~~~~~~-~~l~sgs~D~~i~iwd~~~~~------------- 183 (410)
T 1vyh_C 129 DATIKVWDYETGDFERTLK-----------GHTDSVQDISFDHSG-KLLASCSADMTIKLWDFQGFE------------- 183 (410)
T ss_dssp SSCEEEEETTTCCCCEEEC-----------CCSSCEEEEEECTTS-SEEEEEETTSCCCEEETTSSC-------------
T ss_pred CCeEEEEECCCCcEEEEEe-----------ccCCcEEEEEEcCCC-CEEEEEeCCCeEEEEeCCCCc-------------
Confidence 6899999998877655443 478899999999998 899999999999999998776
Q ss_pred cccccccCCCcccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEe
Q 021160 82 FCPRHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFF 160 (316)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 160 (316)
+...+ .+|...|.+++|+|++.+|+++ .|++|++||++++ ..+..+.+|... +.++.+
T Consensus 184 -~~~~~-~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~----------------~~~~~~~~h~~~--v~~~~~- 242 (410)
T 1vyh_C 184 -CIRTM-HGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTG----------------YCVKTFTGHREW--VRMVRP- 242 (410)
T ss_dssp -EEECC-CCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTC----------------CEEEEEECCSSC--EEEEEE-
T ss_pred -eeEEE-cCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCC----------------cEEEEEeCCCcc--EEEEEE-
Confidence 33333 7899999999999999988885 7999999999988 678889999876 999999
Q ss_pred cCCCcEEEEeccCCeEEEEeccCCeeEEEeecCccceEEEEEcCC--------------------CCeEEEEeCCCcEEE
Q 021160 161 GPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPH--------------------IPMFATCGIEKTVKL 220 (316)
Q Consensus 161 ~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~--------------------~~~l~s~~~d~~i~i 220 (316)
++++.++++|+.|+.|++||+.++++...+.+|...|.+++|+|+ +++|++|+.|+.|++
T Consensus 243 ~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~i 322 (410)
T 1vyh_C 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKM 322 (410)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEE
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEE
Confidence 999999999999999999999999999999999999999999996 668999999999999
Q ss_pred ecCCCCC-CCCCCCCcccceeeeecCCCCceeEEecCCCeEEEEEecccCcce---------eE-EeecccccccccCCC
Q 021160 221 WAPMPTD-FPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTLA---------YR-ERRYNAADFESDEEE 289 (316)
Q Consensus 221 wd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~~~~---------~~-~~~~~~~~~~~~~~~ 289 (316)
||++++. +..+.+|...+..+. +++++.++++++.|+.|++||+.+++... .. .+.|+...++++..+
T Consensus 323 wd~~~~~~~~~~~~h~~~v~~v~-~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D 401 (410)
T 1vyh_C 323 WDVSTGMCLMTLVGHDNWVRGVL-FHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVD 401 (410)
T ss_dssp EETTTTEEEEEEECCSSCEEEEE-ECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETT
T ss_pred EECCCCceEEEEECCCCcEEEEE-EcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCC
Confidence 9999876 667778888876666 78899999999999999999997653321 11 567778888888888
Q ss_pred CeEEEEec
Q 021160 290 GETYLLGF 297 (316)
Q Consensus 290 ~~v~~~~~ 297 (316)
+.|.+|+.
T Consensus 402 ~~i~vW~~ 409 (410)
T 1vyh_C 402 QTVKVWEC 409 (410)
T ss_dssp SEEEEEC-
T ss_pred CcEEEEeC
Confidence 88888875
No 4
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=3.6e-37 Score=257.81 Aligned_cols=252 Identities=13% Similarity=0.186 Sum_probs=205.5
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
+|.|++||+.+.+....+.. |...|.+++|+|++ .++++|+.|+.+++|++.+.+.. .
T Consensus 76 Dg~v~iWd~~~~~~~~~~~~-----------~~~~v~~~~~s~~~-~~l~s~~~d~~v~iw~~~~~~~~--------~-- 133 (340)
T 1got_B 76 DGKLIIWDSYTTNKVHAIPL-----------RSSWVMTCAYAPSG-NYVACGGLDNICSIYNLKTREGN--------V-- 133 (340)
T ss_dssp TTEEEEEETTTCCEEEEEEC-----------SSSCEEEEEECTTS-SEEEEEETTCEEEEEETTTCSBS--------C--
T ss_pred CCcEEEEECCCCCcceEeec-----------CCccEEEEEECCCC-CEEEEEeCCCeEEEEECccCCCc--------c--
Confidence 68999999988766544443 67889999999999 89999999999999999865310 0
Q ss_pred cccccccCCCcccEEEEEEccCCCeEEEecCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEec
Q 021160 82 FCPRHLIGKNNIHITGLAYSNTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFG 161 (316)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 161 (316)
.......+|...|.++.|++++.+++++.|++|++||+.++ .....+.+|... |.+++| +
T Consensus 134 -~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~----------------~~~~~~~~h~~~--v~~~~~-~ 193 (340)
T 1got_B 134 -RVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETG----------------QQTTTFTGHTGD--VMSLSL-A 193 (340)
T ss_dssp -EEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTT----------------EEEEEECCCSSC--EEEEEE-C
T ss_pred -eeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCC----------------cEEEEEcCCCCc--eEEEEE-C
Confidence 11122267899999999999887666678999999999887 677888889876 999999 9
Q ss_pred CCCcEEEEeccCCeEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC-CCCCC--CCcccc
Q 021160 162 PNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD-FPPLP--DNAEKI 238 (316)
Q Consensus 162 ~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~-~~~~~--~~~~~~ 238 (316)
|++.++++|+.|+.|++||+++++++..+.+|...|.+++|+|++++|++++.|++|++||++..+ +..+. .+...+
T Consensus 194 ~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v 273 (340)
T 1got_B 194 PDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGI 273 (340)
T ss_dssp TTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCE
T ss_pred CCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccce
Confidence 999999999999999999999999999999999999999999999999999999999999998765 22222 222344
Q ss_pred eeeeecCCCCceeEEecCCCeEEEEEecccCcc---------eeE-EeecccccccccCCCCeEEEEe
Q 021160 239 MKANKQGREDHSRITLTPDVIMHVLRLQRRQTL---------AYR-ERRYNAADFESDEEEGETYLLG 296 (316)
Q Consensus 239 ~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~~~---------~~~-~~~~~~~~~~~~~~~~~v~~~~ 296 (316)
..+. +++++.++++++.|+.+++||+.+.... +.. .+.|++..++++..++.|.+|+
T Consensus 274 ~~~~-~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 274 TSVS-FSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEEE-ECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEE-ECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 4444 8899999999999999999998765332 111 5667777777777777777774
No 5
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.9e-37 Score=257.26 Aligned_cols=218 Identities=17% Similarity=0.310 Sum_probs=192.7
Q ss_pred CceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCce
Q 021160 1 MVLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVD 80 (316)
Q Consensus 1 ~~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~ 80 (316)
.+|.|++||+.+.+....+.. |...+.+++|+|++ ++|++|+.|+.|++|++++++
T Consensus 100 ~D~~i~lWd~~~~~~~~~~~~-----------~~~~~~~~~~spdg-~~l~~g~~dg~v~i~~~~~~~------------ 155 (321)
T 3ow8_A 100 LDAHIRLWDLENGKQIKSIDA-----------GPVDAWTLAFSPDS-QYLATGTHVGKVNIFGVESGK------------ 155 (321)
T ss_dssp TTSEEEEEETTTTEEEEEEEC-----------CTTCCCCEEECTTS-SEEEEECTTSEEEEEETTTCS------------
T ss_pred CCCcEEEEECCCCCEEEEEeC-----------CCccEEEEEECCCC-CEEEEEcCCCcEEEEEcCCCc------------
Confidence 368999999988766555443 56678999999999 899999999999999999876
Q ss_pred ecccccccCCCcccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEE
Q 021160 81 TFCPRHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNF 159 (316)
Q Consensus 81 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 159 (316)
....+ ..|...+.+++|+|++++|+++ .|+.|++||++++ +.+..+.+|... |.+++|
T Consensus 156 --~~~~~-~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~----------------~~~~~~~~h~~~--v~~l~~ 214 (321)
T 3ow8_A 156 --KEYSL-DTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG----------------KLLHTLEGHAMP--IRSLTF 214 (321)
T ss_dssp --EEEEE-ECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT----------------EEEEEECCCSSC--CCEEEE
T ss_pred --eeEEe-cCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCC----------------cEEEEEcccCCc--eeEEEE
Confidence 22222 5677889999999999988885 7999999999887 677888888866 999999
Q ss_pred ecCCCcEEEEeccCCeEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC-CCCCCCCcccc
Q 021160 160 FGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD-FPPLPDNAEKI 238 (316)
Q Consensus 160 ~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~~~~ 238 (316)
+|++++|++|+.|+.|++||+++++....+.+|...|.+++|+|++++|++++.|++|++||+.+++ +..+.+|...+
T Consensus 215 -spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v 293 (321)
T 3ow8_A 215 -SPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQV 293 (321)
T ss_dssp -CTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCE
T ss_pred -cCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcE
Confidence 9999999999999999999999999999999999999999999999999999999999999999877 66777888888
Q ss_pred eeeeecCCCCceeEEecCCCeEEEEEe
Q 021160 239 MKANKQGREDHSRITLTPDVIMHVLRL 265 (316)
Q Consensus 239 ~~~~~~~~~~~~~~s~~~d~~~~~w~~ 265 (316)
..+. +++++..+++++.|+.|++||.
T Consensus 294 ~~v~-~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 294 WGVK-YNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp EEEE-ECTTSSEEEEEETTCCEEEEEC
T ss_pred EEEE-ECCCCCEEEEEeCCCeEEEEeC
Confidence 7776 7889999999999999999985
No 6
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.3e-36 Score=252.10 Aligned_cols=254 Identities=13% Similarity=0.139 Sum_probs=205.9
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
+|.|++||+.......-..... +.+|...|.+++|+|++ .+|++|+.|++|++||+.+++
T Consensus 39 D~~v~~W~~~~~~~~~~~~~~~------~~~h~~~v~~~~~s~dg-~~l~s~s~D~~v~~wd~~~~~------------- 98 (319)
T 3frx_A 39 DKTLISWKLTGDDQKFGVPVRS------FKGHSHIVQDCTLTADG-AYALSASWDKTLRLWDVATGE------------- 98 (319)
T ss_dssp TSEEEEEEEEEETTEEEEEEEE------EECCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTE-------------
T ss_pred CccEEEecCCCCCccccccceE------EeCCcccEEEEEECCCC-CEEEEEeCCCEEEEEECCCCC-------------
Confidence 6899999997644321111111 12589999999999999 899999999999999999886
Q ss_pred cccccccCCCcccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEe
Q 021160 82 FCPRHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFF 160 (316)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 160 (316)
+...+ .+|...|.+++|+|++.+++++ .|++|++||++.. .+..+.+|... +.+++|
T Consensus 99 -~~~~~-~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~-----------------~~~~~~~h~~~--v~~~~~- 156 (319)
T 3frx_A 99 -TYQRF-VGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQ-----------------CLATLLGHNDW--VSQVRV- 156 (319)
T ss_dssp -EEEEE-ECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSC-----------------EEEEECCCSSC--EEEEEE-
T ss_pred -eeEEE-ccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-----------------eEEEEeccCCc--EEEEEE-
Confidence 23333 6899999999999999988885 7999999999753 66778888866 999998
Q ss_pred cCC------CcEEEEeccCCeEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC-CCCCCC
Q 021160 161 GPN------DEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD-FPPLPD 233 (316)
Q Consensus 161 ~~~------~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~-~~~~~~ 233 (316)
.|. +.++++++.|+.|++||+++++....+.+|...|.+++|+|++++|++++.|+.|++||+..++ +..+.
T Consensus 157 ~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~- 235 (319)
T 3frx_A 157 VPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLS- 235 (319)
T ss_dssp CCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEE-
T ss_pred ccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEec-
Confidence 664 4589999999999999999999999999999999999999999999999999999999999876 44443
Q ss_pred CcccceeeeecCCCCceeEEecCCCeEEEEEecccCc-----------------ce-eEEeecccccccccCCCCeEEEE
Q 021160 234 NAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQT-----------------LA-YRERRYNAADFESDEEEGETYLL 295 (316)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~~-----------------~~-~~~~~~~~~~~~~~~~~~~v~~~ 295 (316)
+...+..++ +++++.++++++.+ .+++|++..... .+ ...++|++..+.++..++.|.+|
T Consensus 236 ~~~~v~~~~-~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vW 313 (319)
T 3frx_A 236 AQDEVFSLA-FSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVW 313 (319)
T ss_dssp CCSCEEEEE-ECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred CCCcEEEEE-EcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEE
Confidence 334565555 88888888877755 589998764311 11 23788999999999999999999
Q ss_pred eccCC
Q 021160 296 GFSDS 300 (316)
Q Consensus 296 ~~~~~ 300 (316)
++..+
T Consensus 314 d~~t~ 318 (319)
T 3frx_A 314 QVMTA 318 (319)
T ss_dssp EEEEC
T ss_pred EEeec
Confidence 98654
No 7
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=8.1e-37 Score=251.72 Aligned_cols=235 Identities=17% Similarity=0.232 Sum_probs=195.8
Q ss_pred CCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEe-
Q 021160 32 MNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY- 110 (316)
Q Consensus 32 gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~- 110 (316)
+|...|++++|+|++ .+|++|+.||.|++||+.+++ ....+ ..|..+|.+++|+|++++|+++
T Consensus 11 ~h~~~V~~~~fsp~~-~~l~s~~~dg~v~lWd~~~~~--------------~~~~~-~~~~~~v~~~~~~~~~~~l~s~s 74 (304)
T 2ynn_A 11 NRSDRVKGIDFHPTE-PWVLTTLYSGRVELWNYETQV--------------EVRSI-QVTETPVRAGKFIARKNWIIVGS 74 (304)
T ss_dssp EECSCEEEEEECSSS-SEEEEEETTSEEEEEETTTTE--------------EEEEE-ECCSSCEEEEEEEGGGTEEEEEE
T ss_pred CCCCceEEEEECCCC-CEEEEEcCCCcEEEEECCCCc--------------eeEEe-eccCCcEEEEEEeCCCCEEEEEC
Confidence 478999999999999 899999999999999999876 23333 6788899999999999988885
Q ss_pred cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCC-eeEEE
Q 021160 111 NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGG-KLVRL 189 (316)
Q Consensus 111 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~-~~~~~ 189 (316)
.|++|++||+.++ +.+..+.+|... |.+++| +|++.+|++|+.|+.|++||++++ .+...
T Consensus 75 ~d~~i~vwd~~~~----------------~~~~~~~~h~~~--v~~~~~-~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~ 135 (304)
T 2ynn_A 75 DDFRIRVFNYNTG----------------EKVVDFEAHPDY--IRSIAV-HPTKPYVLSGSDDLTVKLWNWENNWALEQT 135 (304)
T ss_dssp TTSEEEEEETTTC----------------CEEEEEECCSSC--EEEEEE-CSSSSEEEEEETTSCEEEEEGGGTTEEEEE
T ss_pred CCCEEEEEECCCC----------------cEEEEEeCCCCc--EEEEEE-cCCCCEEEEECCCCeEEEEECCCCcchhhh
Confidence 7999999999988 678889999976 999999 999999999999999999999887 55677
Q ss_pred eecCccceEEEEEcC-CCCeEEEEeCCCcEEEecCCCCC-CCCCC-CCcccceeeeecC-CCCceeEEecCCCeEEEEEe
Q 021160 190 MVGDRHVVNQLEPHP-HIPMFATCGIEKTVKLWAPMPTD-FPPLP-DNAEKIMKANKQG-REDHSRITLTPDVIMHVLRL 265 (316)
Q Consensus 190 ~~~~~~~v~~~~~~p-~~~~l~s~~~d~~i~iwd~~~~~-~~~~~-~~~~~~~~~~~~~-~~~~~~~s~~~d~~~~~w~~ 265 (316)
+.+|...|.+++|+| ++..|++|+.|++|++||++... ...+. .+...+....+.. +++.++++++.|+.|++||+
T Consensus 136 ~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~ 215 (304)
T 2ynn_A 136 FEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDY 215 (304)
T ss_dssp ECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEET
T ss_pred hcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeC
Confidence 889999999999999 56889999999999999997765 22222 3334444444322 36789999999999999998
Q ss_pred cccCcc---------ee-EEeecccccccccCCCCeEEEEeccCCC
Q 021160 266 QRRQTL---------AY-RERRYNAADFESDEEEGETYLLGFSDSD 301 (316)
Q Consensus 266 ~~~~~~---------~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 301 (316)
++++.. +. ..+.|+...++++..+|.|.+||...+.
T Consensus 216 ~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~ 261 (304)
T 2ynn_A 216 QTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYK 261 (304)
T ss_dssp TTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCC
T ss_pred CCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCc
Confidence 765322 12 2678888889999999999999987765
No 8
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.3e-36 Score=260.60 Aligned_cols=235 Identities=16% Similarity=0.251 Sum_probs=204.3
Q ss_pred CCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEe
Q 021160 31 PMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY 110 (316)
Q Consensus 31 ~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~ 110 (316)
.||..+|++++|+|++ .++++|+.||.|++||+.+++ ....+ .+|...|.+++|+|++++|+++
T Consensus 105 ~gh~~~V~~~~~~p~~-~~l~s~s~Dg~i~vwd~~~~~--------------~~~~l-~~h~~~V~~v~~~~~~~~l~sg 168 (410)
T 1vyh_C 105 SGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYETGD--------------FERTL-KGHTDSVQDISFDHSGKLLASC 168 (410)
T ss_dssp ECCSSCEEEEEECSSS-SEEEEEESSSCEEEEETTTCC--------------CCEEE-CCCSSCEEEEEECTTSSEEEEE
T ss_pred cccCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCc--------------EEEEE-eccCCcEEEEEEcCCCCEEEEE
Confidence 4899999999999998 899999999999999999886 33333 7899999999999999988885
Q ss_pred -cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCeeEEE
Q 021160 111 -NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRL 189 (316)
Q Consensus 111 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~ 189 (316)
.|++|++||+.+. ..+..+.+|... |.+++| +|++.+|++|+.|+.|++||+++++++..
T Consensus 169 s~D~~i~iwd~~~~----------------~~~~~~~~h~~~--V~~v~~-~p~~~~l~s~s~D~~i~~wd~~~~~~~~~ 229 (410)
T 1vyh_C 169 SADMTIKLWDFQGF----------------ECIRTMHGHDHN--VSSVSI-MPNGDHIVSASRDKTIKMWEVQTGYCVKT 229 (410)
T ss_dssp ETTSCCCEEETTSS----------------CEEECCCCCSSC--EEEEEE-CSSSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred eCCCeEEEEeCCCC----------------ceeEEEcCCCCC--EEEEEE-eCCCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 7999999999887 677788889876 999999 99999999999999999999999999999
Q ss_pred eecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC-CCCCCCCcccceeeeecCCC--------------------C
Q 021160 190 MVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD-FPPLPDNAEKIMKANKQGRE--------------------D 248 (316)
Q Consensus 190 ~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~--------------------~ 248 (316)
+.+|...|.+++|+|++.+|++++.|+.|++||+.++. ...+.+|...+..+. +.++ +
T Consensus 230 ~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g 308 (410)
T 1vyh_C 230 FTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECIS-WAPESSYSSISEATGSETKKSGKPG 308 (410)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEE-ECCSCGGGGGGGCCSCC-------C
T ss_pred EeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEE-EcCcccccchhhhccccccccCCCC
Confidence 99999999999999999999999999999999998876 556667777776665 4443 5
Q ss_pred ceeEEecCCCeEEEEEecccCcc---------ee-EEeecccccccccCCCCeEEEEeccCCC
Q 021160 249 HSRITLTPDVIMHVLRLQRRQTL---------AY-RERRYNAADFESDEEEGETYLLGFSDSD 301 (316)
Q Consensus 249 ~~~~s~~~d~~~~~w~~~~~~~~---------~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 301 (316)
.++++++.|+.+++||+.++... +. ..+.|++..+.++..++.|.+||+..+.
T Consensus 309 ~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~ 371 (410)
T 1vyh_C 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 371 (410)
T ss_dssp CEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSC
T ss_pred CEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 68999999999999998865322 22 2677888899999999999999986653
No 9
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.5e-37 Score=260.30 Aligned_cols=228 Identities=11% Similarity=0.096 Sum_probs=179.7
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
+|.|+|||+.+.+........ ..+|...|++++|+|++ ++|++|+.|+.|++||+++++
T Consensus 114 dg~v~lWd~~~~~~~~~~~~~-------~~~h~~~V~~v~~spdg-~~l~sgs~dg~v~iwd~~~~~------------- 172 (357)
T 4g56_B 114 SGAVELWEILEKESLLVNKFA-------KYEHDDIVKTLSVFSDG-TQAVSGGKDFSVKVWDLSQKA------------- 172 (357)
T ss_dssp TSCEEEC--------CCCCEE-------ECCCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTTTE-------------
T ss_pred CCEEEEeeccccceeEEEeec-------cCCCCCCEEEEEECCCC-CEEEEEeCCCeEEEEECCCCc-------------
Confidence 689999999887653322211 12489999999999999 899999999999999999886
Q ss_pred cccccccCCCcccEEEEEEccCCC-eEEE-ecCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEE
Q 021160 82 FCPRHLIGKNNIHITGLAYSNTSE-LLIS-YNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNF 159 (316)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~~~~~~-~l~s-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 159 (316)
+...+ .+|...|.+++|++++. ++++ +.|++|++||++++ +....+..+.....+.+++|
T Consensus 173 -~~~~~-~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~----------------~~~~~~~~~~~~~~v~~v~~ 234 (357)
T 4g56_B 173 -VLKSY-NAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKP----------------KPATRIDFCASDTIPTSVTW 234 (357)
T ss_dssp -EEEEE-CCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSS----------------SCBCBCCCTTCCSCEEEEEE
T ss_pred -EEEEE-cCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCC----------------ceeeeeeeccccccccchhh
Confidence 33333 78999999999999885 6666 57999999999887 44444443333244999999
Q ss_pred ecCC-CcEEEEeccCCeEEEEeccCCeeEEEeecCccceEEEEEcCCC-CeEEEEeCCCcEEEecCCCCCCCCCCCCccc
Q 021160 160 FGPN-DEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHI-PMFATCGIEKTVKLWAPMPTDFPPLPDNAEK 237 (316)
Q Consensus 160 ~~~~-~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 237 (316)
+|+ +.+|++|+.|+.|++||+++++++..+.+|...|++++|+|++ ++|++++.|++|+|||++++++....+|...
T Consensus 235 -sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~H~~~ 313 (357)
T 4g56_B 235 -HPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLSHRDF 313 (357)
T ss_dssp -CTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEECCCSSC
T ss_pred -hhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECCCCCC
Confidence 776 5789999999999999999999999999999999999999987 5699999999999999998885555679888
Q ss_pred ceeeeecCC-CCceeEEecCCCeEEEEEecccCc
Q 021160 238 IMKANKQGR-EDHSRITLTPDVIMHVLRLQRRQT 270 (316)
Q Consensus 238 ~~~~~~~~~-~~~~~~s~~~d~~~~~w~~~~~~~ 270 (316)
+..++ |+| ++.++++++.|+.|++|++.....
T Consensus 314 V~~va-fsP~d~~~l~s~s~Dg~v~iW~~~~~~~ 346 (357)
T 4g56_B 314 VTGVA-WSPLDHSKFTTVGWDHKVLHHHLPSEGR 346 (357)
T ss_dssp EEEEE-ECSSSTTEEEEEETTSCEEEEECC----
T ss_pred EEEEE-EeCCCCCEEEEEcCCCeEEEEECCCCCc
Confidence 87777 565 889999999999999999876533
No 10
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.5e-36 Score=248.81 Aligned_cols=224 Identities=18% Similarity=0.185 Sum_probs=188.7
Q ss_pred CceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCce
Q 021160 1 MVLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVD 80 (316)
Q Consensus 1 ~~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~ 80 (316)
.+|.|+|||+.+......+.. |..+|.+++|+|++ ++|++|+.|+.|++||+.+++
T Consensus 33 ~dg~v~lWd~~~~~~~~~~~~-----------~~~~v~~~~~~~~~-~~l~s~s~d~~i~vwd~~~~~------------ 88 (304)
T 2ynn_A 33 YSGRVELWNYETQVEVRSIQV-----------TETPVRAGKFIARK-NWIIVGSDDFRIRVFNYNTGE------------ 88 (304)
T ss_dssp TTSEEEEEETTTTEEEEEEEC-----------CSSCEEEEEEEGGG-TEEEEEETTSEEEEEETTTCC------------
T ss_pred CCCcEEEEECCCCceeEEeec-----------cCCcEEEEEEeCCC-CEEEEECCCCEEEEEECCCCc------------
Confidence 368999999988765544443 67889999999998 899999999999999999886
Q ss_pred ecccccccCCCcccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEE
Q 021160 81 TFCPRHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNF 159 (316)
Q Consensus 81 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 159 (316)
+...+ .+|...|.+++|+|++.+|+++ .|++|++||++++. .....+.+|... |.+++|
T Consensus 89 --~~~~~-~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~---------------~~~~~~~~h~~~--v~~v~~ 148 (304)
T 2ynn_A 89 --KVVDF-EAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW---------------ALEQTFEGHEHF--VMCVAF 148 (304)
T ss_dssp --EEEEE-ECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTT---------------EEEEEECCCCSC--EEEEEE
T ss_pred --EEEEE-eCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCc---------------chhhhhcccCCc--EEEEEE
Confidence 33333 6899999999999999988885 79999999998751 244667888866 999999
Q ss_pred ecC-CCcEEEEeccCCeEEEEeccCCeeEEEee-cCccceEEEEEcC--CCCeEEEEeCCCcEEEecCCCCC-CCCCCCC
Q 021160 160 FGP-NDEYVMSGSDCGHLFIWKKKGGKLVRLMV-GDRHVVNQLEPHP--HIPMFATCGIEKTVKLWAPMPTD-FPPLPDN 234 (316)
Q Consensus 160 ~~~-~~~~l~~~~~dg~v~~wd~~~~~~~~~~~-~~~~~v~~~~~~p--~~~~l~s~~~d~~i~iwd~~~~~-~~~~~~~ 234 (316)
+| ++.+|++|+.|+.|++||+.+++....+. +|...+..++|+| ++++|++++.|++|++||+++++ +..+.+|
T Consensus 149 -~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h 227 (304)
T 2ynn_A 149 -NPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGH 227 (304)
T ss_dssp -CTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred -CCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCC
Confidence 77 67899999999999999998877666654 4667899999987 67899999999999999999877 6777888
Q ss_pred cccceeeeecCCCCceeEEecCCCeEEEEEecccCc
Q 021160 235 AEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQT 270 (316)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~~ 270 (316)
...+.... +++++.++++++.|+.|++||+.+.+.
T Consensus 228 ~~~v~~~~-~~p~~~~l~s~s~Dg~i~iWd~~~~~~ 262 (304)
T 2ynn_A 228 MSNVSFAV-FHPTLPIIISGSEDGTLKIWNSSTYKV 262 (304)
T ss_dssp SSCEEEEE-ECSSSSEEEEEETTSCEEEEETTTCCE
T ss_pred CCCEEEEE-ECCCCCEEEEEcCCCeEEEEECCCCce
Confidence 88876665 788899999999999999999887643
No 11
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.8e-35 Score=247.98 Aligned_cols=262 Identities=16% Similarity=0.209 Sum_probs=203.2
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
+|.|+|||+........... ..+|...|.+++|+|++ ++|++|+.|+.+++|++..+...
T Consensus 37 D~~i~iw~~~~~~~~~~~~~--------~~~h~~~v~~~~~sp~g-~~l~s~s~D~~v~iw~~~~~~~~----------- 96 (345)
T 3fm0_A 37 DRRIRIWGTEGDSWICKSVL--------SEGHQRTVRKVAWSPCG-NYLASASFDATTCIWKKNQDDFE----------- 96 (345)
T ss_dssp TSCEEEEEEETTEEEEEEEE--------CSSCSSCEEEEEECTTS-SEEEEEETTSCEEEEEECCC-EE-----------
T ss_pred CCeEEEEEcCCCcceeeeee--------ccccCCcEEEEEECCCC-CEEEEEECCCcEEEEEccCCCeE-----------
Confidence 68999999987653222211 12589999999999999 89999999999999998866410
Q ss_pred cccccccCCCcccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEe
Q 021160 82 FCPRHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFF 160 (316)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 160 (316)
+...+ .+|...|.+++|+|++++|+++ .|++|++||++... .......+.+|... |.+++|
T Consensus 97 -~~~~~-~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~-------------~~~~~~~~~~h~~~--v~~~~~- 158 (345)
T 3fm0_A 97 -CVTTL-EGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEED-------------EYECVSVLNSHTQD--VKHVVW- 158 (345)
T ss_dssp -EEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTS-------------CEEEEEEECCCCSC--EEEEEE-
T ss_pred -EEEEc-cCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCC-------------CeEEEEEecCcCCC--eEEEEE-
Confidence 22222 7899999999999999988885 79999999997651 00234566778866 999999
Q ss_pred cCCCcEEEEeccCCeEEEEeccCCe--eEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC-CC--------
Q 021160 161 GPNDEYVMSGSDCGHLFIWKKKGGK--LVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD-FP-------- 229 (316)
Q Consensus 161 ~~~~~~l~~~~~dg~v~~wd~~~~~--~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~-~~-------- 229 (316)
+|++.+|++++.|+.|++||..+++ +...+.+|...|.+++|+|++++|++++.|++|++|+..... ..
T Consensus 159 ~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~ 238 (345)
T 3fm0_A 159 HPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSD 238 (345)
T ss_dssp CSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---
T ss_pred CCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccC
Confidence 9999999999999999999998875 456788999999999999999999999999999999964322 11
Q ss_pred -------CCCC-CcccceeeeecCCCCceeEEecCCCeEEEEEecccC------------------cceeE-Eeeccc-c
Q 021160 230 -------PLPD-NAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQ------------------TLAYR-ERRYNA-A 281 (316)
Q Consensus 230 -------~~~~-~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~------------------~~~~~-~~~~~~-~ 281 (316)
.+.+ |...+..++ +++++..+++++.|+.+++|+..... ..+.. .+.|+. .
T Consensus 239 ~~~~~~~~~~~~h~~~v~~v~-~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~ 317 (345)
T 3fm0_A 239 PSWKCICTLSGFHSRTIYDIA-WCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPG 317 (345)
T ss_dssp CEEEEEEEECSSCSSCEEEEE-ECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTT
T ss_pred CccceeEEecCCCCCcEEEEE-EecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCce
Confidence 1112 555565555 77888899999999999999986431 11222 677776 4
Q ss_pred cccccCCCCeEEEEeccCCCC
Q 021160 282 DFESDEEEGETYLLGFSDSDA 302 (316)
Q Consensus 282 ~~~~~~~~~~v~~~~~~~~~~ 302 (316)
.++++..||.|.+|+......
T Consensus 318 ~laS~s~Dg~v~~W~~~~~~~ 338 (345)
T 3fm0_A 318 LLASCSDDGEVAFWKYQRPEG 338 (345)
T ss_dssp EEEEEETTSCEEEEEECC---
T ss_pred EEEEcCCCCcEEEEEecCCCC
Confidence 788999999999999987664
No 12
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-35 Score=247.06 Aligned_cols=265 Identities=16% Similarity=0.195 Sum_probs=192.0
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
+|.|++||+............. .+|...|.+++|+|++ .+|++|+.|+.|++||+...... . ..
T Consensus 33 D~~i~lw~~~~~~~~~~~~~~~-------~~h~~~v~~v~~sp~~-~~las~s~D~~v~iw~~~~~~~~-------~-~~ 96 (330)
T 2hes_X 33 DRKIKLVSVKYDDFTLIDVLDE-------TAHKKAIRSVAWRPHT-SLLAAGSFDSTVSIWAKEESADR-------T-FE 96 (330)
T ss_dssp SSCEEEEECSSSCCEEEEEECT-------TCCCSCEEEEEECTTS-SEEEEEETTSCEEEEEC---------------CC
T ss_pred CCEEEEEEecCCCeEEEEEEec-------CCccCCEEEEEECCCC-CEEEEEeCCCcEEEEEcccCcCc-------c-cc
Confidence 6899999998654322222211 1388999999999998 89999999999999998643200 0 00
Q ss_pred cccccccCCCcccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEe
Q 021160 82 FCPRHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFF 160 (316)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 160 (316)
........+|...|.+++|+|++++|+++ .|++|++||++... ...+.+..+.+|... |.+++|
T Consensus 97 ~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~------------~~~~~~~~~~~h~~~--v~~v~~- 161 (330)
T 2hes_X 97 MDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESG------------EEYECISVLQEHSQD--VKHVIW- 161 (330)
T ss_dssp CEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTC------------CCCEEEEEECCCSSC--EEEEEE-
T ss_pred ceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCC------------CCeEEEEEeccCCCc--eEEEEE-
Confidence 01112237899999999999999988885 79999999995320 001244567788866 999999
Q ss_pred cCCCcEEEEeccCCeEEEEeccCC--eeEEEeecCccceEEEEEcCC--CCeEEEEeCCCcEEEecCCCCC---------
Q 021160 161 GPNDEYVMSGSDCGHLFIWKKKGG--KLVRLMVGDRHVVNQLEPHPH--IPMFATCGIEKTVKLWAPMPTD--------- 227 (316)
Q Consensus 161 ~~~~~~l~~~~~dg~v~~wd~~~~--~~~~~~~~~~~~v~~~~~~p~--~~~l~s~~~d~~i~iwd~~~~~--------- 227 (316)
+|++.+|++++.|+.|++||..++ +++..+.+|...|.+++|+|+ +..|++++.|++|++||+....
T Consensus 162 ~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~ 241 (330)
T 2hes_X 162 HPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVC 241 (330)
T ss_dssp CSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEE
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEE
Confidence 999999999999999999999876 678889999999999999998 6789999999999999986541
Q ss_pred CCCCCC-CcccceeeeecCCCCceeEEecCCCeEEEEEecccCc-------------ceeE-Eeec--ccccccccCCCC
Q 021160 228 FPPLPD-NAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQT-------------LAYR-ERRY--NAADFESDEEEG 290 (316)
Q Consensus 228 ~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~~-------------~~~~-~~~~--~~~~~~~~~~~~ 290 (316)
...+.. |...+..+. +++ +.++++++.|+.+++|+...+.. .+.. .+.| +...++++..+|
T Consensus 242 ~~~~~~~h~~~v~~v~-~s~-~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg 319 (330)
T 2hes_X 242 EAILPDVHKRQVYNVA-WGF-NGLIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDG 319 (330)
T ss_dssp EEECCSCCSSCEEEEE-ECT-TSCEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTS
T ss_pred eeecccccccceEEEE-EcC-CCEEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCC
Confidence 223333 677777776 454 34899999999999999865421 1111 4455 466788888999
Q ss_pred eEEEEeccC
Q 021160 291 ETYLLGFSD 299 (316)
Q Consensus 291 ~v~~~~~~~ 299 (316)
.|.+|++..
T Consensus 320 ~v~~W~~~~ 328 (330)
T 2hes_X 320 IVNFWSLEK 328 (330)
T ss_dssp EEEEEEC--
T ss_pred cEEEEEecc
Confidence 999998754
No 13
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2.4e-35 Score=247.96 Aligned_cols=254 Identities=13% Similarity=0.150 Sum_probs=204.0
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
+|.|+|||..+.+....+.. |...|.+++|+|++ .++++|+.|+.+++|++....... ..
T Consensus 85 Dg~v~vWd~~~~~~~~~~~~-----------~~~~v~~~~~sp~g-~~lasg~~d~~i~v~~~~~~~~~~-------~~- 144 (354)
T 2pbi_B 85 DGKVIVWDSFTTNKEHAVTM-----------PCTWVMACAYAPSG-CAIACGGLDNKCSVYPLTFDKNEN-------MA- 144 (354)
T ss_dssp TSEEEEEETTTCCEEEEEEC-----------SSSCCCEEEECTTS-SEEEEESTTSEEEEEECCCCTTCC-------SG-
T ss_pred CCeEEEEECCCCCcceEEec-----------CCCCEEEEEECCCC-CEEEEeeCCCCEEEEEEecccccc-------cc-
Confidence 78999999987766555543 56789999999999 899999999999999987543100 00
Q ss_pred cccccccCCCcccEEEEEEccCCCeEEE-ecCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEe
Q 021160 82 FCPRHLIGKNNIHITGLAYSNTSELLIS-YNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFF 160 (316)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~~~~~~~l~s-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 160 (316)
.......+|...|.+++|+|++..|++ +.|++|++||++++ +.+..+.+|... +.+++|
T Consensus 145 -~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~----------------~~~~~~~~h~~~--v~~~~~- 204 (354)
T 2pbi_B 145 -AKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESG----------------QLLQSFHGHGAD--VLCLDL- 204 (354)
T ss_dssp -GGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTC----------------CEEEEEECCSSC--EEEEEE-
T ss_pred -ccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCC----------------eEEEEEcCCCCC--eEEEEE-
Confidence 111222578999999999999987777 57999999999988 678889999876 999998
Q ss_pred cC--CCcEEEEeccCCeEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC-CCCCC--CCc
Q 021160 161 GP--NDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD-FPPLP--DNA 235 (316)
Q Consensus 161 ~~--~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~-~~~~~--~~~ 235 (316)
+| ++.+|++|+.||.|++||+++++++..+.+|...|.+++|+|++++|++++.|++|++||++... ...+. .+.
T Consensus 205 ~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~ 284 (354)
T 2pbi_B 205 APSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESII 284 (354)
T ss_dssp CCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCC
T ss_pred EeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcc
Confidence 66 57899999999999999999999999999999999999999999999999999999999998765 22222 122
Q ss_pred ccceeeeecCCCCceeEEecCCCeEEEEEecccCcc---------ee-EEeecccccccccCCCCeEEEEe
Q 021160 236 EKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTL---------AY-RERRYNAADFESDEEEGETYLLG 296 (316)
Q Consensus 236 ~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~~~---------~~-~~~~~~~~~~~~~~~~~~v~~~~ 296 (316)
..+. ...+++++.++++++.|+.+++||+.++... +. ..+.|++..+++++.++.|.+|+
T Consensus 285 ~~~~-~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 285 FGAS-SVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp SCEE-EEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred ccee-EEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 2333 3447889999999999999999998765322 11 26778888888888888888774
No 14
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=5.1e-35 Score=241.82 Aligned_cols=236 Identities=16% Similarity=0.292 Sum_probs=198.7
Q ss_pred CCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEe
Q 021160 31 PMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY 110 (316)
Q Consensus 31 ~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~ 110 (316)
.||...|++++|+|++ ++|++|+.||.|++|++.+++ ....+ .+|...|.+++|+|++++|+++
T Consensus 20 ~gh~~~v~~~~~s~~~-~~l~s~~~dg~i~iw~~~~~~--------------~~~~~-~~h~~~v~~~~~~~~~~~l~s~ 83 (312)
T 4ery_A 20 AGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGK--------------FEKTI-SGHKLGISDVAWSSDSNLLVSA 83 (312)
T ss_dssp CCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCC--------------EEEEE-CCCSSCEEEEEECTTSSEEEEE
T ss_pred cccCCcEEEEEECCCC-CEEEEeeCCCeEEEEeCCCcc--------------cchhh-ccCCCceEEEEEcCCCCEEEEE
Confidence 4699999999999999 899999999999999998776 22223 7889999999999999988885
Q ss_pred -cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCeeEEE
Q 021160 111 -NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRL 189 (316)
Q Consensus 111 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~ 189 (316)
.|+.|++||++++ +....+.+|... |.+++| +|++.++++|+.|+.|++||+++++.+..
T Consensus 84 ~~d~~i~vwd~~~~----------------~~~~~~~~~~~~--v~~~~~-~~~~~~l~s~~~d~~i~iwd~~~~~~~~~ 144 (312)
T 4ery_A 84 SDDKTLKIWDVSSG----------------KCLKTLKGHSNY--VFCCNF-NPQSNLIVSGSFDESVRIWDVKTGKCLKT 144 (312)
T ss_dssp ETTSEEEEEETTTC----------------CEEEEEECCSSC--EEEEEE-CSSSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred CCCCEEEEEECCCC----------------cEEEEEcCCCCC--EEEEEE-cCCCCEEEEEeCCCcEEEEECCCCEEEEE
Confidence 7999999999887 677888899866 999999 99999999999999999999999999999
Q ss_pred eecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC-CCCCCCCcccceeeeecCCCCceeEEecCCCeEEEEEeccc
Q 021160 190 MVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD-FPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR 268 (316)
Q Consensus 190 ~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~ 268 (316)
+..|...|.+++|+|++++|++++.|+.|++||++.++ +..+..+.........+++++.++++++.|+.+++||+.++
T Consensus 145 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 224 (312)
T 4ery_A 145 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG 224 (312)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTT
T ss_pred ecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 99999999999999999999999999999999998876 33333333333444558899999999999999999999865
Q ss_pred CcceeE------------Ee-ecccccccccCCCCeEEEEeccCCC
Q 021160 269 QTLAYR------------ER-RYNAADFESDEEEGETYLLGFSDSD 301 (316)
Q Consensus 269 ~~~~~~------------~~-~~~~~~~~~~~~~~~v~~~~~~~~~ 301 (316)
+..... .+ .+....+.++..+|.|++|++..+.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~ 270 (312)
T 4ery_A 225 KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE 270 (312)
T ss_dssp EEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCC
T ss_pred cEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCch
Confidence 432211 11 2345667888899999999987664
No 15
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=5.3e-36 Score=250.56 Aligned_cols=236 Identities=10% Similarity=0.071 Sum_probs=190.9
Q ss_pred CccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEe-c
Q 021160 33 NSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-N 111 (316)
Q Consensus 33 h~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~ 111 (316)
|...|.+++|+|++ .|++|+.||.|+|||+.+++... .......+|...|++++|+|+|++|+++ .
T Consensus 81 ~~~~v~~~~~s~d~--~l~~~s~dg~v~lWd~~~~~~~~-----------~~~~~~~~H~~~V~~v~~spdg~~l~sgs~ 147 (344)
T 4gqb_B 81 TEAGVADLTWVGER--GILVASDSGAVELWELDENETLI-----------VSKFCKYEHDDIVSTVSVLSSGTQAVSGSK 147 (344)
T ss_dssp ESSCEEEEEEETTT--EEEEEETTSEEEEEEECTTSSCE-----------EEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred cCCCEEEEEEeCCC--eEEEEECCCEEEEEeccCCCcee-----------EeeccccCCCCCEEEEEECCCCCEEEEEeC
Confidence 45689999999975 78899999999999999876211 1112225899999999999999998885 7
Q ss_pred CCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCC-cEEEEeccCCeEEEEeccCCeeEEEe
Q 021160 112 DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPND-EYVMSGSDCGHLFIWKKKGGKLVRLM 190 (316)
Q Consensus 112 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~l~~~~~dg~v~~wd~~~~~~~~~~ 190 (316)
|++|++||++++ +.+..+.+|... |.+++| ++++ .++++++.|+.|++||+++++....+
T Consensus 148 d~~i~iwd~~~~----------------~~~~~~~~h~~~--V~~~~~-~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~ 208 (344)
T 4gqb_B 148 DICIKVWDLAQQ----------------VVLSSYRAHAAQ--VTCVAA-SPHKDSVFLSCSEDNRILLWDTRCPKPASQI 208 (344)
T ss_dssp TSCEEEEETTTT----------------EEEEEECCCSSC--EEEEEE-CSSCTTEEEEEETTSCEEEEETTSSSCEEEC
T ss_pred CCeEEEEECCCC----------------cEEEEEcCcCCc--eEEEEe-cCCCCCceeeeccccccccccccccceeeee
Confidence 999999999988 788899999977 999999 7776 57899999999999999999988877
Q ss_pred e--cCccceEEEEEcCC-CCeEEEEeCCCcEEEecCCCCC-CCCCCCCcccceeeeecCCCC-ceeEEecCCCeEEEEEe
Q 021160 191 V--GDRHVVNQLEPHPH-IPMFATCGIEKTVKLWAPMPTD-FPPLPDNAEKIMKANKQGRED-HSRITLTPDVIMHVLRL 265 (316)
Q Consensus 191 ~--~~~~~v~~~~~~p~-~~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~d~~~~~w~~ 265 (316)
. .|...+.+++|+|+ +++|++|+.|+.|++||+++++ +..+.+|...+..+. +++++ .++++++.|+.|++||+
T Consensus 209 ~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~-fsp~g~~~lasgs~D~~i~vwd~ 287 (344)
T 4gqb_B 209 GCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLV-FSPHSVPFLASLSEDCSLAVLDS 287 (344)
T ss_dssp C----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEE-ECSSSSCCEEEEETTSCEEEECT
T ss_pred ecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEE-EccCCCeEEEEEeCCCeEEEEEC
Confidence 4 35567899999995 4678999999999999999877 677888988887776 67765 67899999999999998
Q ss_pred cccCcc--------eeE-Eeeccccc-ccccCCCCeEEEEeccCCC
Q 021160 266 QRRQTL--------AYR-ERRYNAAD-FESDEEEGETYLLGFSDSD 301 (316)
Q Consensus 266 ~~~~~~--------~~~-~~~~~~~~-~~~~~~~~~v~~~~~~~~~ 301 (316)
.+++.. +.. .+.|+... ++++..|++|.+|++....
T Consensus 288 ~~~~~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 288 SLSELFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp TCCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred CCCcEEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 876432 222 57777765 5678889999999987643
No 16
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.1e-34 Score=243.01 Aligned_cols=254 Identities=14% Similarity=0.143 Sum_probs=194.7
Q ss_pred ceeeEEEEeeCCCcceE--EEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCc
Q 021160 2 VLFNMLFDLRSDSATRL--FYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPV 79 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~--~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~ 79 (316)
+|.|++||+...+.... .... ...+|...|.+++|+|++ .++++|+.|++|++||+++++
T Consensus 48 D~~v~iWd~~~~~~~~~~~~~~~------~l~~h~~~V~~~~~~~~~-~~l~s~s~D~~v~lwd~~~~~----------- 109 (343)
T 2xzm_R 48 DKTVMIWKLYEEEQNGYFGIPHK------ALTGHNHFVSDLALSQEN-CFAISSSWDKTLRLWDLRTGT----------- 109 (343)
T ss_dssp TSCEEEEEECSSCCSSBSEEEEE------EECCCSSCEEEEEECSST-TEEEEEETTSEEEEEETTSSC-----------
T ss_pred CCEEEEEECCcCCcccccccccc------hhccCCCceEEEEECCCC-CEEEEEcCCCcEEEEECCCCc-----------
Confidence 68999999976542110 0011 123689999999999998 899999999999999999876
Q ss_pred eecccccccCCCcccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCCCCCCccCCccccccCCCccee---eCCcCCceee
Q 021160 80 DTFCPRHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVY---SGHRNSQTVK 155 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~ 155 (316)
+...+ .+|...|.+++|+|++++|+++ .|++|++||+... ..... .+|... +.
T Consensus 110 ---~~~~~-~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~-----------------~~~~~~~~~~~~~~--v~ 166 (343)
T 2xzm_R 110 ---TYKRF-VGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGE-----------------CKFSSAEKENHSDW--VS 166 (343)
T ss_dssp ---EEEEE-ECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSC-----------------EEEECCTTTSCSSC--EE
T ss_pred ---EEEEE-cCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCC-----------------ceeeeecccCCCce--ee
Confidence 23333 6899999999999999988874 7999999998743 22222 256654 99
Q ss_pred eEEEecCCC----------cEEEEeccCCeEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCC
Q 021160 156 GVNFFGPND----------EYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMP 225 (316)
Q Consensus 156 ~~~~~~~~~----------~~l~~~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~ 225 (316)
+++| +|++ .++++++.|+.|++||. ..+....+.+|...|.+++|+|++++|++++.|+.|++||+..
T Consensus 167 ~~~~-~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~ 244 (343)
T 2xzm_R 167 CVRY-SPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILN 244 (343)
T ss_dssp EEEE-CCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSC
T ss_pred eeee-ccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 9999 7876 78999999999999994 5777888899999999999999999999999999999999954
Q ss_pred CC-CCCCCCCcccceeeeecCCCCceeEEecCCCeEEEEEecccCcc----------------------ee-EEeecccc
Q 021160 226 TD-FPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTL----------------------AY-RERRYNAA 281 (316)
Q Consensus 226 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~~~----------------------~~-~~~~~~~~ 281 (316)
.. ......+...+..++ +++++.+++ ++.|+.+++|++.+.... +. ..+.|++.
T Consensus 245 ~~~~~~~~~~~~~v~~v~-~sp~~~~la-~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~ 322 (343)
T 2xzm_R 245 LTYPQREFDAGSTINQIA-FNPKLQWVA-VGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGK 322 (343)
T ss_dssp CSSCSEEEECSSCEEEEE-ECSSSCEEE-EEESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSC
T ss_pred CcccceeecCCCcEEEEE-ECCCCCEEE-EECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCC
Confidence 33 222222334454554 778776665 556888999998654321 11 26788888
Q ss_pred cccccCCCCeEEEEeccCC
Q 021160 282 DFESDEEEGETYLLGFSDS 300 (316)
Q Consensus 282 ~~~~~~~~~~v~~~~~~~~ 300 (316)
.++++..+|.|.+|++..+
T Consensus 323 ~l~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 323 KLFAGFTDGVIRTFSFETS 341 (343)
T ss_dssp CEEEEETTSEEEEEEEEEE
T ss_pred eEEEecCCceEEEEEEEcc
Confidence 8999999999999988653
No 17
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=6.3e-36 Score=254.01 Aligned_cols=262 Identities=13% Similarity=0.130 Sum_probs=205.5
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
+|.|+|||+.+.+....+.. |...|.+++|+|++ ++|++|+.|+.+++|++.+.... -..
T Consensus 87 D~~v~iWd~~~~~~~~~~~~-----------h~~~v~~~~~s~~g-~~las~~~d~~v~iw~~~~~~~~--------~~~ 146 (380)
T 3iz6_a 87 DGRLIVWNALTSQKTHAIKL-----------HCPWVMECAFAPNG-QSVACGGLDSACSIFNLSSQADR--------DGN 146 (380)
T ss_dssp TSEEEEEETTTTEEEEEEEC-----------CCTTCCCCEECTTS-SEEEECCSSSCCEEEECCCCSSC--------CCS
T ss_pred CCeEEEEECCCCccceEEec-----------CCCCEEEEEECCCC-CEEEEeeCCCcEEEEECCCCccc--------cCC
Confidence 78999999988766554443 67889999999999 89999999999999999764310 001
Q ss_pred cccccccCCCcccEEEEEEccCC-CeEEE-ecCCcEEEEEcCCCCCCCCccCCccccccCCCccee-----eCCcCCcee
Q 021160 82 FCPRHLIGKNNIHITGLAYSNTS-ELLIS-YNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVY-----SGHRNSQTV 154 (316)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~~~~~-~~l~s-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~i 154 (316)
........+|...+.++.|+|++ ..|++ +.|++|++||+.++ ..+..+ .+|... +
T Consensus 147 ~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~----------------~~~~~~~~~~~~~h~~~--v 208 (380)
T 3iz6_a 147 MPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTG----------------QRISIFGSEFPSGHTAD--V 208 (380)
T ss_dssp STTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTC----------------CEEEEECCCSSSSCCSC--E
T ss_pred ccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCC----------------cEEEEeecccCCCCccC--e
Confidence 11223347899999999999975 45666 57999999999887 444444 466655 9
Q ss_pred eeEEEecCCCcEEEEeccCCeEEEEecc-CCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC-CCCCC
Q 021160 155 KGVNFFGPNDEYVMSGSDCGHLFIWKKK-GGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD-FPPLP 232 (316)
Q Consensus 155 ~~~~~~~~~~~~l~~~~~dg~v~~wd~~-~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~-~~~~~ 232 (316)
.+++|.++++.++++|+.|+.|++||++ .++.+..+.+|...|.+++|+|++++|++++.|++|++||++++. +..+.
T Consensus 209 ~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~ 288 (380)
T 3iz6_a 209 LSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYN 288 (380)
T ss_dssp EEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEEC
T ss_pred EEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEec
Confidence 9999955589999999999999999998 567788899999999999999999999999999999999998865 22221
Q ss_pred CCc------ccceeeeecCCCCceeEEecCCCeEEEEEecccCcc-------------ee-EEeecccccccccCCCCeE
Q 021160 233 DNA------EKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTL-------------AY-RERRYNAADFESDEEEGET 292 (316)
Q Consensus 233 ~~~------~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~~~-------------~~-~~~~~~~~~~~~~~~~~~v 292 (316)
.+. ...+....++++++++++++.|+.+++||+..++.. +. ..+.|++..++++..++.|
T Consensus 289 ~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i 368 (380)
T 3iz6_a 289 REPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNL 368 (380)
T ss_dssp CCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCE
T ss_pred ccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCE
Confidence 111 112334448899999999999999999997543221 12 2688899999999999999
Q ss_pred EEEeccCCC
Q 021160 293 YLLGFSDSD 301 (316)
Q Consensus 293 ~~~~~~~~~ 301 (316)
.+|+++...
T Consensus 369 ~iW~~~~~~ 377 (380)
T 3iz6_a 369 KIWAFSGHR 377 (380)
T ss_dssp EEEECCSSS
T ss_pred EEEecCCCc
Confidence 999997643
No 18
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.4e-35 Score=246.25 Aligned_cols=239 Identities=17% Similarity=0.245 Sum_probs=197.0
Q ss_pred CCcc-ceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEe
Q 021160 32 MNSI-RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY 110 (316)
Q Consensus 32 gh~~-~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~ 110 (316)
+|.. .|.+++|+|++ .+||+|+.|+.|++||+.+++.. +...+..+|...|.+++|+|++++|+++
T Consensus 13 ~h~~~~v~~l~~sp~g-~~las~~~D~~i~iw~~~~~~~~------------~~~~~~~~h~~~v~~~~~sp~g~~l~s~ 79 (345)
T 3fm0_A 13 AHPDSRCWFLAWNPAG-TLLASCGGDRRIRIWGTEGDSWI------------CKSVLSEGHQRTVRKVAWSPCGNYLASA 79 (345)
T ss_dssp CSTTSCEEEEEECTTS-SCEEEEETTSCEEEEEEETTEEE------------EEEEECSSCSSCEEEEEECTTSSEEEEE
T ss_pred CCCCCcEEEEEECCCC-CEEEEEcCCCeEEEEEcCCCcce------------eeeeeccccCCcEEEEEECCCCCEEEEE
Confidence 5776 89999999999 89999999999999999876421 2223336899999999999999988885
Q ss_pred -cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCC---ee
Q 021160 111 -NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGG---KL 186 (316)
Q Consensus 111 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~---~~ 186 (316)
.|+++++|++.... ......+.+|... |.+++| +|++++|++|+.|+.|++||+.++ ++
T Consensus 80 s~D~~v~iw~~~~~~--------------~~~~~~~~~h~~~--v~~v~~-sp~~~~l~s~s~D~~v~iwd~~~~~~~~~ 142 (345)
T 3fm0_A 80 SFDATTCIWKKNQDD--------------FECVTTLEGHENE--VKSVAW-APSGNLLATCSRDKSVWVWEVDEEDEYEC 142 (345)
T ss_dssp ETTSCEEEEEECCC---------------EEEEEEECCCSSC--EEEEEE-CTTSSEEEEEETTSCEEEEEECTTSCEEE
T ss_pred ECCCcEEEEEccCCC--------------eEEEEEccCCCCC--ceEEEE-eCCCCEEEEEECCCeEEEEECCCCCCeEE
Confidence 79999999987651 0245677889876 999999 999999999999999999999876 34
Q ss_pred EEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC---CCCCCCCcccceeeeecCCCCceeEEecCCCeEEEE
Q 021160 187 VRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD---FPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVL 263 (316)
Q Consensus 187 ~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w 263 (316)
+..+.+|...|.+++|+|++++|++++.|+.|++|+.+... ...+.+|...+..+. +++++.++++++.|+.|++|
T Consensus 143 ~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~-~sp~g~~l~s~s~D~~v~iW 221 (345)
T 3fm0_A 143 VSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLA-FDPSGQRLASCSDDRTVRIW 221 (345)
T ss_dssp EEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEE-ECTTSSEEEEEETTSCEEEE
T ss_pred EEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEE-ECCCCCEEEEEeCCCeEEEe
Confidence 66778899999999999999999999999999999988764 356778888887776 78899999999999999999
Q ss_pred EecccC-------------------------cceeE-EeecccccccccCCCCeEEEEeccCCC
Q 021160 264 RLQRRQ-------------------------TLAYR-ERRYNAADFESDEEEGETYLLGFSDSD 301 (316)
Q Consensus 264 ~~~~~~-------------------------~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~ 301 (316)
+..... ..++. .+.+....+++...++.+.+|+...+.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~ 285 (345)
T 3fm0_A 222 RQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNS 285 (345)
T ss_dssp EEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTS
T ss_pred ccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCC
Confidence 974321 11222 566777788888888889999876554
No 19
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=5.2e-35 Score=244.67 Aligned_cols=238 Identities=12% Similarity=0.137 Sum_probs=201.2
Q ss_pred CCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEe
Q 021160 31 PMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY 110 (316)
Q Consensus 31 ~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~ 110 (316)
.||.+.|++++|+|++ .+|++|+.||.|++||+.+++ ....+ ..|...|.+++|+|++++++++
T Consensus 52 ~gH~~~v~~~~~s~d~-~~l~s~s~Dg~v~iWd~~~~~--------------~~~~~-~~~~~~v~~~~~s~~~~~l~s~ 115 (340)
T 1got_B 52 RGHLAKIYAMHWGTDS-RLLLSASQDGKLIIWDSYTTN--------------KVHAI-PLRSSWVMTCAYAPSGNYVACG 115 (340)
T ss_dssp CCCSSCEEEEEECTTS-SEEEEEETTTEEEEEETTTCC--------------EEEEE-ECSSSCEEEEEECTTSSEEEEE
T ss_pred cCCCCceEEEEECCCC-CEEEEEeCCCcEEEEECCCCC--------------cceEe-ecCCccEEEEEECCCCCEEEEE
Confidence 4799999999999999 899999999999999998776 22222 5678899999999999988885
Q ss_pred -cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCeeEEE
Q 021160 111 -NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRL 189 (316)
Q Consensus 111 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~ 189 (316)
.|+.|++|++.+... .......+.+|... +.++.| ++++. +++++.|+.|++||+++++.+..
T Consensus 116 ~~d~~v~iw~~~~~~~------------~~~~~~~~~~h~~~--v~~~~~-~~~~~-l~s~s~d~~i~~wd~~~~~~~~~ 179 (340)
T 1got_B 116 GLDNICSIYNLKTREG------------NVRVSRELAGHTGY--LSCCRF-LDDNQ-IVTSSGDTTCALWDIETGQQTTT 179 (340)
T ss_dssp ETTCEEEEEETTTCSB------------SCEEEEEEECCSSC--EEEEEE-EETTE-EEEEETTSCEEEEETTTTEEEEE
T ss_pred eCCCeEEEEECccCCC------------cceeEEEecCCCcc--EEEEEE-CCCCc-EEEEECCCcEEEEECCCCcEEEE
Confidence 799999999976510 01234567788866 999999 77665 88999999999999999999999
Q ss_pred eecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC-CCCCCCCcccceeeeecCCCCceeEEecCCCeEEEEEeccc
Q 021160 190 MVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD-FPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR 268 (316)
Q Consensus 190 ~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~ 268 (316)
+.+|...|.+++|+|++++|++++.|+.|++||++.+. ...+.+|...+..+. +++++.++++++.|+.+++||++..
T Consensus 180 ~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~-~~p~~~~l~s~s~d~~v~iwd~~~~ 258 (340)
T 1got_B 180 FTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAIC-FFPNGNAFATGSDDATCRLFDLRAD 258 (340)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEE-ECTTSSEEEEEETTSCEEEEETTTT
T ss_pred EcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEE-EcCCCCEEEEEcCCCcEEEEECCCC
Confidence 99999999999999999999999999999999999877 666778888876666 7889999999999999999998764
Q ss_pred Ccc-----------e-eEEeecccccccccCCCCeEEEEeccCCC
Q 021160 269 QTL-----------A-YRERRYNAADFESDEEEGETYLLGFSDSD 301 (316)
Q Consensus 269 ~~~-----------~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 301 (316)
+.. + ...+.|++..+.++..++.|.+||...+.
T Consensus 259 ~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~ 303 (340)
T 1got_B 259 QELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKAD 303 (340)
T ss_dssp EEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred cEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCc
Confidence 321 1 12678889999999999999999986654
No 20
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1e-34 Score=261.12 Aligned_cols=252 Identities=15% Similarity=0.206 Sum_probs=204.3
Q ss_pred eeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceec
Q 021160 3 LFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTF 82 (316)
Q Consensus 3 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~ 82 (316)
+.|+|||+.+.+....+. +|...|++++|+|++ ++||+|+.|++|+|||+.+++.
T Consensus 39 ~~v~l~~~~~~~~~~~~~-----------~h~~~v~~~~~spdg-~~lasg~~d~~v~lWd~~~~~~------------- 93 (611)
T 1nr0_A 39 TSVYTVPVGSLTDTEIYT-----------EHSHQTTVAKTSPSG-YYCASGDVHGNVRIWDTTQTTH------------- 93 (611)
T ss_dssp TEEEEEETTCSSCCEEEC-----------CCSSCEEEEEECTTS-SEEEEEETTSEEEEEESSSTTC-------------
T ss_pred CEEEEecCCCcccCeEec-----------CCCCceEEEEECCCC-cEEEEEeCCCCEEEeECCCCcc-------------
Confidence 578999997665544442 488999999999999 8999999999999999976541
Q ss_pred ccccccCCCcccEEEEEEccCCCeEEEe-cC----CcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeE
Q 021160 83 CPRHLIGKNNIHITGLAYSNTSELLISY-ND----ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGV 157 (316)
Q Consensus 83 ~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 157 (316)
.......+|...|.+++|+|+++.|+++ .+ +.|++||. + .....+.+|... |.++
T Consensus 94 ~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~--~----------------~~~~~l~gh~~~--v~~v 153 (611)
T 1nr0_A 94 ILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDT--G----------------TSNGNLTGQARA--MNSV 153 (611)
T ss_dssp CEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTT--C----------------CBCBCCCCCSSC--EEEE
T ss_pred eeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeC--C----------------CCcceecCCCCC--ceEE
Confidence 1111226788999999999999988774 32 36777774 3 355677889866 9999
Q ss_pred EEecCCCc-EEEEeccCCeEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC-CCCCC---
Q 021160 158 NFFGPNDE-YVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD-FPPLP--- 232 (316)
Q Consensus 158 ~~~~~~~~-~l~~~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~-~~~~~--- 232 (316)
+| +|++. .|++|+.|++|++||..++++...+.+|...|.+++|+|++++|++++.|++|++||+.+++ ...+.
T Consensus 154 ~f-~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~ 232 (611)
T 1nr0_A 154 DF-KPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDS 232 (611)
T ss_dssp EE-CSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTT
T ss_pred EE-CCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeecccc
Confidence 99 89886 59999999999999999999999999999999999999999999999999999999988765 33331
Q ss_pred ----CCcccceeeeecCCCCceeEEecCCCeEEEEEecccCcc-------------------------------------
Q 021160 233 ----DNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTL------------------------------------- 271 (316)
Q Consensus 233 ----~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~~~------------------------------------- 271 (316)
+|...+..+. |++++.++++++.|+++++||+.+++..
T Consensus 233 ~~~~~h~~~V~~v~-~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~ 311 (611)
T 1nr0_A 233 LKNVAHSGSVFGLT-WSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNP 311 (611)
T ss_dssp SSSCSSSSCEEEEE-ECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEET
T ss_pred ccccccCCCEEEEE-ECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeC
Confidence 6888887776 8899999999999999999998754211
Q ss_pred ---------------ee-EEeecccccccccCCCCeEEEEeccCCC
Q 021160 272 ---------------AY-RERRYNAADFESDEEEGETYLLGFSDSD 301 (316)
Q Consensus 272 ---------------~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 301 (316)
+. ..+.|++..+.+...++.|.+|+...+.
T Consensus 312 ~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~ 357 (611)
T 1nr0_A 312 ELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGI 357 (611)
T ss_dssp TTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred CCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCc
Confidence 11 1466778888888889999999987653
No 21
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=7.5e-36 Score=251.28 Aligned_cols=261 Identities=11% Similarity=0.092 Sum_probs=196.5
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
+|.|++|+..+..+...+.... .+|...|.+++|+|++ .+++++.||.|++||+.+++...
T Consensus 69 d~~v~~~~~~~~~~~~~~~~~~-------~~~~~~V~~~~~s~d~--~~l~~s~dg~v~lWd~~~~~~~~---------- 129 (357)
T 4g56_B 69 GGSIWVFKDPEGAPNESLCTAG-------VQTEAGVTDVAWVSEK--GILVASDSGAVELWEILEKESLL---------- 129 (357)
T ss_dssp CEEEEEESSCC---CGGGCSEE-------EECSSCEEEEEEETTT--EEEEEETTSCEEEC--------C----------
T ss_pred cCeEEEEECCCCCcceeEeccc-------CCCCCCEEEEEEcCCC--CEEEEECCCEEEEeeccccceeE----------
Confidence 5778888876654322211111 1378899999999987 46677889999999998876221
Q ss_pred cccccccCCCcccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEe
Q 021160 82 FCPRHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFF 160 (316)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 160 (316)
.......+|...|.+++|+|++++|+++ .|++|++||++++ +.+..+.+|... |.+++|
T Consensus 130 -~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~----------------~~~~~~~~h~~~--v~~v~~- 189 (357)
T 4g56_B 130 -VNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQK----------------AVLKSYNAHSSE--VNCVAA- 189 (357)
T ss_dssp -CCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTT----------------EEEEEECCCSSC--EEEEEE-
T ss_pred -EEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCC----------------cEEEEEcCCCCC--EEEEEE-
Confidence 1111225789999999999999988885 7999999999988 678888999876 999999
Q ss_pred cCCCc-EEEEeccCCeEEEEeccCCeeEEEee--cCccceEEEEEcCCC-CeEEEEeCCCcEEEecCCCCC-CCCCCCCc
Q 021160 161 GPNDE-YVMSGSDCGHLFIWKKKGGKLVRLMV--GDRHVVNQLEPHPHI-PMFATCGIEKTVKLWAPMPTD-FPPLPDNA 235 (316)
Q Consensus 161 ~~~~~-~l~~~~~dg~v~~wd~~~~~~~~~~~--~~~~~v~~~~~~p~~-~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~ 235 (316)
++++. ++++++.|+.|++||+++++....+. .|...+.+++|+|++ .+|++|+.|+.|++||+++.+ ...+.+|.
T Consensus 190 s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~ 269 (357)
T 4g56_B 190 CPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHS 269 (357)
T ss_dssp CTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCS
T ss_pred ccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccc
Confidence 77764 78999999999999999988776554 466789999999975 578999999999999999877 66777888
Q ss_pred ccceeeeecCCC-CceeEEecCCCeEEEEEecccCcc--------eeE-Eeec-ccccccccCCCCeEEEEeccCCCC
Q 021160 236 EKIMKANKQGRE-DHSRITLTPDVIMHVLRLQRRQTL--------AYR-ERRY-NAADFESDEEEGETYLLGFSDSDA 302 (316)
Q Consensus 236 ~~~~~~~~~~~~-~~~~~s~~~d~~~~~w~~~~~~~~--------~~~-~~~~-~~~~~~~~~~~~~v~~~~~~~~~~ 302 (316)
..+..++ ++++ ++++++++.|+.|++||+++++.. +.. .+.| +...+++...||.|.+|++....+
T Consensus 270 ~~v~~l~-~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~~ 346 (357)
T 4g56_B 270 QNITGLA-YSYHSSPFLASISEDCTVAVLDADFSEVFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEGR 346 (357)
T ss_dssp SCEEEEE-ECSSSSCCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC----
T ss_pred eeEEEEE-EcCCCCCEEEEEeCCCEEEEEECCCCcEeEECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCc
Confidence 8887776 6665 468899999999999998875332 222 5776 677888999999999999866543
No 22
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.1e-34 Score=238.14 Aligned_cols=250 Identities=15% Similarity=0.231 Sum_probs=200.1
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
+|.|++||+.+.+....+. +|...|.+++|+|++ ++|++|+.|+.|++||+++++
T Consensus 44 dg~i~iw~~~~~~~~~~~~-----------~h~~~v~~~~~~~~~-~~l~s~~~d~~i~vwd~~~~~------------- 98 (312)
T 4ery_A 44 DKLIKIWGAYDGKFEKTIS-----------GHKLGISDVAWSSDS-NLLVSASDDKTLKIWDVSSGK------------- 98 (312)
T ss_dssp TSCEEEEETTTCCEEEEEC-----------CCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCC-------------
T ss_pred CCeEEEEeCCCcccchhhc-----------cCCCceEEEEEcCCC-CEEEEECCCCEEEEEECCCCc-------------
Confidence 6899999998766544432 478899999999998 899999999999999999876
Q ss_pred cccccccCCCcccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEe
Q 021160 82 FCPRHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFF 160 (316)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 160 (316)
+...+ .+|...|.+++|+|++++|+++ .|+.|++||++++ +....+..|... +.+++|
T Consensus 99 -~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~----------------~~~~~~~~~~~~--v~~~~~- 157 (312)
T 4ery_A 99 -CLKTL-KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG----------------KCLKTLPAHSDP--VSAVHF- 157 (312)
T ss_dssp -EEEEE-ECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC----------------CEEEEECCCSSC--EEEEEE-
T ss_pred -EEEEE-cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCC----------------EEEEEecCCCCc--EEEEEE-
Confidence 23333 6788999999999999988885 7999999999887 677788888866 999999
Q ss_pred cCCCcEEEEeccCCeEEEEeccCCeeEEEee-cCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC-CCCCCCCcccc
Q 021160 161 GPNDEYVMSGSDCGHLFIWKKKGGKLVRLMV-GDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD-FPPLPDNAEKI 238 (316)
Q Consensus 161 ~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~-~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~~~~ 238 (316)
+|++.++++++.||.|++||+++++.+..+. .+...+..++|+|++++|++++.|+.|++||++.++ +..+.+|....
T Consensus 158 ~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 237 (312)
T 4ery_A 158 NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEK 237 (312)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSS
T ss_pred cCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCce
Confidence 9999999999999999999999998887764 456789999999999999999999999999998876 44555555433
Q ss_pred e--eeeecCCCCceeEEecCCCeEEEEEecccCccee---------E-Eeeccccccccc--CCCCeEEEEec
Q 021160 239 M--KANKQGREDHSRITLTPDVIMHVLRLQRRQTLAY---------R-ERRYNAADFESD--EEEGETYLLGF 297 (316)
Q Consensus 239 ~--~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~~~~~---------~-~~~~~~~~~~~~--~~~~~v~~~~~ 297 (316)
. ......+++.++++++.|+.|++|++.+++.... . .+.|....+++. +.++.|.+|..
T Consensus 238 ~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~ 310 (312)
T 4ery_A 238 YCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 310 (312)
T ss_dssp SCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEEC
T ss_pred EEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecC
Confidence 2 2233345788999999999999999987643321 1 455555555544 35666777764
No 23
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2.7e-34 Score=241.58 Aligned_cols=241 Identities=10% Similarity=0.118 Sum_probs=201.5
Q ss_pred CCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEe
Q 021160 31 PMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY 110 (316)
Q Consensus 31 ~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~ 110 (316)
.||...|++++|+|++ .+|++|+.||.|++||..+++ ....+ ..|...|.+++|+|++.+++++
T Consensus 61 ~gH~~~V~~~~~s~d~-~~l~s~s~Dg~v~vWd~~~~~--------------~~~~~-~~~~~~v~~~~~sp~g~~lasg 124 (354)
T 2pbi_B 61 KGHGNKVLCMDWCKDK-RRIVSSSQDGKVIVWDSFTTN--------------KEHAV-TMPCTWVMACAYAPSGCAIACG 124 (354)
T ss_dssp ECCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCC--------------EEEEE-ECSSSCCCEEEECTTSSEEEEE
T ss_pred cCCCCeEEEEEECCCC-CEEEEEeCCCeEEEEECCCCC--------------cceEE-ecCCCCEEEEEECCCCCEEEEe
Confidence 4799999999999999 899999999999999998775 22222 4567789999999999988885
Q ss_pred -cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCeeEEE
Q 021160 111 -NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRL 189 (316)
Q Consensus 111 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~ 189 (316)
.|+.+++|++....... .......+.+|... |.+++| +|++..|++++.|++|++||+++++++..
T Consensus 125 ~~d~~i~v~~~~~~~~~~----------~~~~~~~~~~h~~~--v~~~~~-~~~~~~l~t~s~D~~v~lwd~~~~~~~~~ 191 (354)
T 2pbi_B 125 GLDNKCSVYPLTFDKNEN----------MAAKKKSVAMHTNY--LSACSF-TNSDMQILTASGDGTCALWDVESGQLLQS 191 (354)
T ss_dssp STTSEEEEEECCCCTTCC----------SGGGCEEEEECSSC--EEEEEE-CSSSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred eCCCCEEEEEEecccccc----------ccccceeeeccCCc--EEEEEE-eCCCCEEEEEeCCCcEEEEeCCCCeEEEE
Confidence 79999999986541100 01234567788866 999999 99999999999999999999999999999
Q ss_pred eecCccceEEEEEcC--CCCeEEEEeCCCcEEEecCCCCC-CCCCCCCcccceeeeecCCCCceeEEecCCCeEEEEEec
Q 021160 190 MVGDRHVVNQLEPHP--HIPMFATCGIEKTVKLWAPMPTD-FPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQ 266 (316)
Q Consensus 190 ~~~~~~~v~~~~~~p--~~~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~ 266 (316)
+.+|...|.+++|+| ++++|++++.|+.|++||+++++ ...+..|...+..+. +++++.++++++.|+.+++||++
T Consensus 192 ~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~-~~p~~~~l~s~s~D~~v~lwd~~ 270 (354)
T 2pbi_B 192 FHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVR-YYPSGDAFASGSDDATCRLYDLR 270 (354)
T ss_dssp EECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEE-ECTTSSEEEEEETTSCEEEEETT
T ss_pred EcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEE-EeCCCCEEEEEeCCCeEEEEECC
Confidence 999999999999988 46799999999999999999887 666777888886666 78889999999999999999987
Q ss_pred ccCcc------------eeEEeecccccccccCCCCeEEEEeccCCC
Q 021160 267 RRQTL------------AYRERRYNAADFESDEEEGETYLLGFSDSD 301 (316)
Q Consensus 267 ~~~~~------------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 301 (316)
..... ....+.|++..+.++..++.|.+||...+.
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~ 317 (354)
T 2pbi_B 271 ADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGS 317 (354)
T ss_dssp TTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS
T ss_pred CCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCc
Confidence 64221 122678888899999999999999987654
No 24
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.2e-34 Score=260.67 Aligned_cols=275 Identities=10% Similarity=0.054 Sum_probs=206.4
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
+|.|++||..+.+....+ .+|...|++++|+|++ .+|++|+.|++|++||+.+++....+.
T Consensus 169 D~~v~lwd~~~~~~~~~l-----------~~H~~~V~~v~fspdg-~~las~s~D~~i~lwd~~~g~~~~~~~------- 229 (611)
T 1nr0_A 169 DNTVAIFEGPPFKFKSTF-----------GEHTKFVHSVRYNPDG-SLFASTGGDGTIVLYNGVDGTKTGVFE------- 229 (611)
T ss_dssp TSCEEEEETTTBEEEEEE-----------CCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCEEEECB-------
T ss_pred CCeEEEEECCCCeEeeee-----------ccccCceEEEEECCCC-CEEEEEECCCcEEEEECCCCcEeeeec-------
Confidence 688999998665433222 2589999999999999 899999999999999998876321110
Q ss_pred cccccccCCCcccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCCCCC---------------------------CccCCc
Q 021160 82 FCPRHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPS---------------------------PLSLSP 133 (316)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~---------------------------~~~~~~ 133 (316)
.......+|...|.+++|+|++++|+++ .|++|++||+.++.... ...+..
T Consensus 230 -~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~ 308 (611)
T 1nr0_A 230 -DDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINF 308 (611)
T ss_dssp -CTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEE
T ss_pred -cccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEE
Confidence 0000012799999999999999988885 79999999998653110 011112
Q ss_pred cccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCeeEEEe-e---------------------
Q 021160 134 EDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLM-V--------------------- 191 (316)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~-~--------------------- 191 (316)
++.........+.+|... |.+++| +|++++|++++.|+.|++||+.+++....+ .
T Consensus 309 ~~~~~~~~~~~~~gh~~~--v~~l~~-spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s 385 (611)
T 1nr0_A 309 VNPELGSIDQVRYGHNKA--ITALSS-SADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVS 385 (611)
T ss_dssp EETTTTEEEEEECCCSSC--EEEEEE-CTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEE
T ss_pred EeCCCCCcceEEcCCCCC--EEEEEE-eCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEE
Confidence 222233344556788866 999999 999999999999999999998876543221 0
Q ss_pred ------------------------------------------------------------cCccceEEEEEcCCCCeEEE
Q 021160 192 ------------------------------------------------------------GDRHVVNQLEPHPHIPMFAT 211 (316)
Q Consensus 192 ------------------------------------------------------------~~~~~v~~~~~~p~~~~l~s 211 (316)
.|...+.+++|+|++++|++
T Consensus 386 ~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~las 465 (611)
T 1nr0_A 386 WDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAV 465 (611)
T ss_dssp TTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEE
T ss_pred cCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEE
Confidence 02234678999999999999
Q ss_pred EeCCCcEEEecCCCCCC---CCCCCCcccceeeeecCCCCceeEEecCCCeEEEEEecc-c-----------CcceeE-E
Q 021160 212 CGIEKTVKLWAPMPTDF---PPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQR-R-----------QTLAYR-E 275 (316)
Q Consensus 212 ~~~d~~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~-~-----------~~~~~~-~ 275 (316)
|+.|++|++||+..... .. .+|...+..++ +++++.++++++.|+.+++|++.+ . ...+.. .
T Consensus 466 gs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~-fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~ 543 (611)
T 1nr0_A 466 GGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVA-FSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVS 543 (611)
T ss_dssp EETTSEEEEEEEETTEEEEEEE-EECSSCEEEEE-ECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEE
T ss_pred eCCCCeEEEEEccCCceeeeec-cCCCCceEEEE-ECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeecccceeEEE
Confidence 99999999999977542 22 45777776666 899999999999999999999876 2 111222 7
Q ss_pred eecccccccccCCCCeEEEEeccCCC
Q 021160 276 RRYNAADFESDEEEGETYLLGFSDSD 301 (316)
Q Consensus 276 ~~~~~~~~~~~~~~~~v~~~~~~~~~ 301 (316)
++|++..++++..++.|.+|++..+.
T Consensus 544 fspdg~~lasgs~D~~v~lW~~~~~~ 569 (611)
T 1nr0_A 544 WSPDNVRLATGSLDNSVIVWNMNKPS 569 (611)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTCTT
T ss_pred ECCCCCEEEEEECCCcEEEEECCCcc
Confidence 89999999999999999999997654
No 25
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.4e-34 Score=245.32 Aligned_cols=261 Identities=16% Similarity=0.251 Sum_probs=198.2
Q ss_pred ceeeEEEEeeCCCcceEEEeccccc-------cccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCC
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSE-------NSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPIS 74 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~-------~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~ 74 (316)
++.++||++.+.+....+..+.... ......+...|.+++|+|++ ++|++|+.|+.|++||+.+++
T Consensus 84 ~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg-~~l~s~~~d~~i~iwd~~~~~------ 156 (393)
T 1erj_A 84 NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDG-KFLATGAEDRLIRIWDIENRK------ 156 (393)
T ss_dssp BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTS-SEEEEEETTSCEEEEETTTTE------
T ss_pred CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCC-CEEEEEcCCCeEEEEECCCCc------
Confidence 4678999998776544332221100 00001233459999999999 899999999999999999876
Q ss_pred CCCCceecccccccCCCcccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCce
Q 021160 75 SDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQT 153 (316)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (316)
....+ .+|...|.+++|+|++++|+++ .|++|++||++++ +....+. +...
T Consensus 157 --------~~~~~-~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~----------------~~~~~~~-~~~~-- 208 (393)
T 1erj_A 157 --------IVMIL-QGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTG----------------QCSLTLS-IEDG-- 208 (393)
T ss_dssp --------EEEEE-CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT----------------EEEEEEE-CSSC--
T ss_pred --------EEEEE-ccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCC----------------eeEEEEE-cCCC--
Confidence 22233 7899999999999999988885 7999999999887 4555554 3333
Q ss_pred eeeEEEecC-CCcEEEEeccCCeEEEEeccCCeeEEEe-------ecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCC
Q 021160 154 VKGVNFFGP-NDEYVMSGSDCGHLFIWKKKGGKLVRLM-------VGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMP 225 (316)
Q Consensus 154 i~~~~~~~~-~~~~l~~~~~dg~v~~wd~~~~~~~~~~-------~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~ 225 (316)
+.+++| +| ++.++++|+.|+.|++||+++++.+..+ .+|...|.+++|+|++++|++++.|+.|++||++.
T Consensus 209 v~~~~~-~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~ 287 (393)
T 1erj_A 209 VTTVAV-SPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQN 287 (393)
T ss_dssp EEEEEE-CSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred cEEEEE-ECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCC
Confidence 899999 66 8999999999999999999999887776 57889999999999999999999999999999976
Q ss_pred CC-------------CCCCCCCcccceeeeecCCCCceeEEecCCCeEEEEEecccCcceeE----------Eee-----
Q 021160 226 TD-------------FPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTLAYR----------ERR----- 277 (316)
Q Consensus 226 ~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~~~~~~----------~~~----- 277 (316)
.. ...+.+|...+..++ +++++.++++++.|+.+++||+.+++..... .+.
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~-~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~ 366 (393)
T 1erj_A 288 ANNKSDSKTPNSGTCEVTYIGHKDFVLSVA-TTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSL 366 (393)
T ss_dssp -------------CEEEEEECCSSCEEEEE-ECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTT
T ss_pred CCCcccccCCCCCcceEEEecccCcEEEEE-ECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCc
Confidence 43 123345666666665 7788899999999999999998876433221 222
Q ss_pred -cccccccccCCCCeEEEEeccC
Q 021160 278 -YNAADFESDEEEGETYLLGFSD 299 (316)
Q Consensus 278 -~~~~~~~~~~~~~~v~~~~~~~ 299 (316)
|+...++++..+|.|.+|++..
T Consensus 367 ~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 367 GPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp CTTCEEEEEEETTSEEEEEEEEE
T ss_pred CCCCCEEEEECCCCcEEECcccc
Confidence 3456788888899999998754
No 26
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=9.7e-34 Score=232.54 Aligned_cols=236 Identities=14% Similarity=0.172 Sum_probs=191.5
Q ss_pred CCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccC--CCeEE
Q 021160 31 PMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNT--SELLI 108 (316)
Q Consensus 31 ~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~ 108 (316)
.+|...|++++|+|++ ++|++|+.|++|++||+..... . ....+ .+|...|.+++|+++ +++|+
T Consensus 6 ~~h~~~V~~~~~s~~g-~~las~s~D~~v~iw~~~~~~~-------~-----~~~~l-~gH~~~V~~v~~s~~~~g~~l~ 71 (297)
T 2pm7_B 6 NAHNEMIHDAVMDYYG-KRMATCSSDKTIKIFEVEGETH-------K-----LIDTL-TGHEGPVWRVDWAHPKFGTILA 71 (297)
T ss_dssp CSCSSCEEEEEECTTS-SEEEEEETTSCEEEEEBCSSCB-------C-----CCEEE-CCCSSCEEEEEECCGGGCSEEE
T ss_pred cCCcCceEEEEECCCC-CEEEEEeCCCEEEEEecCCCCc-------E-----EEEEE-ccccCCeEEEEecCCCcCCEEE
Confidence 4799999999999999 8999999999999999975421 1 22222 789999999999864 78888
Q ss_pred Ee-cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCC--CcEEEEeccCCeEEEEeccCCe
Q 021160 109 SY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPN--DEYVMSGSDCGHLFIWKKKGGK 185 (316)
Q Consensus 109 s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~l~~~~~dg~v~~wd~~~~~ 185 (316)
++ .|++|++||++++. ......+.+|... |.+++| +|+ +.+|++++.|+.|++||++++.
T Consensus 72 s~s~D~~v~iWd~~~~~--------------~~~~~~~~~h~~~--v~~v~~-~p~~~g~~l~s~s~d~~v~~wd~~~~~ 134 (297)
T 2pm7_B 72 SCSYDGKVMIWKEENGR--------------WSQIAVHAVHSAS--VNSVQW-APHEYGPMLLVASSDGKVSVVEFKENG 134 (297)
T ss_dssp EEETTTEEEEEEBSSSC--------------BCCCEEECCCSSC--EEEEEE-CCGGGCSEEEEEETTSEEEEEEBCSSS
T ss_pred EEcCCCEEEEEEcCCCc--------------eEEEEEeecCCCc--eeEEEe-CcCCCCcEEEEEECCCcEEEEEecCCC
Confidence 85 79999999998751 0234556778766 999999 887 8899999999999999998763
Q ss_pred --eEEEeecCccceEEEEEcCC-------------CCeEEEEeCCCcEEEecCCCCC-----CCCCCCCcccceeeeecC
Q 021160 186 --LVRLMVGDRHVVNQLEPHPH-------------IPMFATCGIEKTVKLWAPMPTD-----FPPLPDNAEKIMKANKQG 245 (316)
Q Consensus 186 --~~~~~~~~~~~v~~~~~~p~-------------~~~l~s~~~d~~i~iwd~~~~~-----~~~~~~~~~~~~~~~~~~ 245 (316)
....+.+|...|.+++|+|+ +++|++|+.|++|++||++... ...+.+|...+..+. |+
T Consensus 135 ~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~-~s 213 (297)
T 2pm7_B 135 TTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVA-WS 213 (297)
T ss_dssp CBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEE-EC
T ss_pred ceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEE-EC
Confidence 24567789999999999997 4689999999999999987654 345778888887777 66
Q ss_pred CC---CceeEEecCCCeEEEEEecccC--------------cceeE-EeecccccccccCCCCeEEEEecc
Q 021160 246 RE---DHSRITLTPDVIMHVLRLQRRQ--------------TLAYR-ERRYNAADFESDEEEGETYLLGFS 298 (316)
Q Consensus 246 ~~---~~~~~s~~~d~~~~~w~~~~~~--------------~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~ 298 (316)
++ +.++++++.|+.+++|++.... ..++. .+.|++..+++...++.|.+|+..
T Consensus 214 p~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 214 PTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp CCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred CCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 65 5899999999999999987532 11222 678889999999999999999875
No 27
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.1e-33 Score=232.31 Aligned_cols=227 Identities=11% Similarity=0.144 Sum_probs=177.9
Q ss_pred CceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCC--CCcEEEEEecCCcEEEEeCcCCcccCCCCCCCC
Q 021160 1 MVLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPR--NPNYFAVGGSDEYARVYDIRKCHWYSPISSDTP 78 (316)
Q Consensus 1 ~~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~--~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~ 78 (316)
.+|.|+|||+........... .+|.++|++++|+|. + .+|++|+.|++|++||+++++..
T Consensus 29 ~D~~v~iw~~~~~~~~~~~~l---------~gH~~~V~~v~~s~~~~g-~~l~s~s~D~~v~iWd~~~~~~~-------- 90 (297)
T 2pm7_B 29 SDKTIKIFEVEGETHKLIDTL---------TGHEGPVWRVDWAHPKFG-TILASCSYDGKVMIWKEENGRWS-------- 90 (297)
T ss_dssp TTSCEEEEEBCSSCBCCCEEE---------CCCSSCEEEEEECCGGGC-SEEEEEETTTEEEEEEBSSSCBC--------
T ss_pred CCCEEEEEecCCCCcEEEEEE---------ccccCCeEEEEecCCCcC-CEEEEEcCCCEEEEEEcCCCceE--------
Confidence 368999999975432222222 258999999999864 5 89999999999999999876421
Q ss_pred ceecccccccCCCcccEEEEEEccC--CCeEEE-ecCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceee
Q 021160 79 VDTFCPRHLIGKNNIHITGLAYSNT--SELLIS-YNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVK 155 (316)
Q Consensus 79 ~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~s-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 155 (316)
.. ....+|...|.+++|+|+ +.+|++ +.|++|++||++.... .....+.+|... |.
T Consensus 91 ----~~-~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~--------------~~~~~~~~h~~~--v~ 149 (297)
T 2pm7_B 91 ----QI-AVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGT--------------TSPIIIDAHAIG--VN 149 (297)
T ss_dssp ----CC-EEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSC--------------BCCEEEECCSSC--EE
T ss_pred ----EE-EEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCc--------------eeeeeeecccCc--cc
Confidence 11 122678899999999997 777777 4799999999976510 123567788866 99
Q ss_pred eEEEecCC-------------CcEEEEeccCCeEEEEeccCCe----eEEEeecCccceEEEEEcCCC---CeEEEEeCC
Q 021160 156 GVNFFGPN-------------DEYVMSGSDCGHLFIWKKKGGK----LVRLMVGDRHVVNQLEPHPHI---PMFATCGIE 215 (316)
Q Consensus 156 ~~~~~~~~-------------~~~l~~~~~dg~v~~wd~~~~~----~~~~~~~~~~~v~~~~~~p~~---~~l~s~~~d 215 (316)
+++| +|+ +++|++|+.|+.|++||+++++ +...+.+|...|.+++|+|++ ++|++++.|
T Consensus 150 ~~~~-~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D 228 (297)
T 2pm7_B 150 SASW-APATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQD 228 (297)
T ss_dssp EEEE-CCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETT
T ss_pred eEee-cCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECC
Confidence 9999 776 5799999999999999998765 567788999999999999985 789999999
Q ss_pred CcEEEecCCCCC------CCCCCCCcccceeeeecCCCCceeEEecCCCeEEEEEeccc
Q 021160 216 KTVKLWAPMPTD------FPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR 268 (316)
Q Consensus 216 ~~i~iwd~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~ 268 (316)
++|++||++... ......|...+..+. |+++++++++++.|+.+++|+....
T Consensus 229 ~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~-~s~~g~~las~~~D~~v~lw~~~~~ 286 (297)
T 2pm7_B 229 RTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRAS-WSLSGNVLALSGGDNKVTLWKENLE 286 (297)
T ss_dssp SCEEEEEESSTTSCCEEEESSSSCCSSCEEEEE-ECSSSCCEEEEETTSCEEEEEECTT
T ss_pred CcEEEEEeCCCCCccceeeeecccCCCcEEEEE-ECCCCCEEEEEcCCCcEEEEEECCC
Confidence 999999987642 111134566665555 8899999999999999999997643
No 28
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.3e-34 Score=245.83 Aligned_cols=242 Identities=13% Similarity=0.183 Sum_probs=199.3
Q ss_pred CCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEe
Q 021160 31 PMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY 110 (316)
Q Consensus 31 ~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~ 110 (316)
.||.+.|++++|+|++ .+|++|+.|++|++||+.+++ ....+ ..|...|.+++|+|++++|+++
T Consensus 63 ~gH~~~V~~~~~sp~~-~~l~s~s~D~~v~iWd~~~~~--------------~~~~~-~~h~~~v~~~~~s~~g~~las~ 126 (380)
T 3iz6_a 63 QGHSGKVYSLDWTPEK-NWIVSASQDGRLIVWNALTSQ--------------KTHAI-KLHCPWVMECAFAPNGQSVACG 126 (380)
T ss_dssp CCCSSCEEEEEECTTS-SCEEEEETTSEEEEEETTTTE--------------EEEEE-ECCCTTCCCCEECTTSSEEEEC
T ss_pred cccccEEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCc--------------cceEE-ecCCCCEEEEEECCCCCEEEEe
Confidence 4799999999999998 899999999999999998876 23333 6788899999999999999885
Q ss_pred -cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCC-CcEEEEeccCCeEEEEeccCCeeEE
Q 021160 111 -NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPN-DEYVMSGSDCGHLFIWKKKGGKLVR 188 (316)
Q Consensus 111 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~l~~~~~dg~v~~wd~~~~~~~~ 188 (316)
.|+.+++||+....... ........+.+|... +.++.| .|+ +..|++|+.|+.|++||+.+++.+.
T Consensus 127 ~~d~~v~iw~~~~~~~~~---------~~~~~~~~~~gh~~~--v~~~~~-~~~~~~~l~s~s~D~~i~~wd~~~~~~~~ 194 (380)
T 3iz6_a 127 GLDSACSIFNLSSQADRD---------GNMPVSRVLTGHKGY--ASSCQY-VPDQETRLITGSGDQTCVLWDVTTGQRIS 194 (380)
T ss_dssp CSSSCCEEEECCCCSSCC---------CSSTTCCBCCCCSSC--CCCCBC-CSSSSSCEEEECTTSCEEEECTTTCCEEE
T ss_pred eCCCcEEEEECCCCcccc---------CCccceeeccCCCcc--eEEEEE-ecCCCCEEEEECCCCcEEEEEcCCCcEEE
Confidence 79999999997541100 011244567888866 999998 554 5679999999999999999999888
Q ss_pred Ee-----ecCccceEEEEEcC-CCCeEEEEeCCCcEEEecCCCC-C-CCCCCCCcccceeeeecCCCCceeEEecCCCeE
Q 021160 189 LM-----VGDRHVVNQLEPHP-HIPMFATCGIEKTVKLWAPMPT-D-FPPLPDNAEKIMKANKQGREDHSRITLTPDVIM 260 (316)
Q Consensus 189 ~~-----~~~~~~v~~~~~~p-~~~~l~s~~~d~~i~iwd~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~ 260 (316)
.+ .+|...|.+++|+| ++.+|++|+.|++|++||++.. . +..+.+|...+..+. +++++.++++++.|+.+
T Consensus 195 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~-~~p~~~~l~s~s~D~~i 273 (380)
T 3iz6_a 195 IFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVK-FFPDGQRFGTGSDDGTC 273 (380)
T ss_dssp EECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEE-ECTTSSEEEEECSSSCE
T ss_pred EeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEE-EecCCCeEEEEcCCCeE
Confidence 77 57889999999987 7889999999999999999743 3 667778888887766 78899999999999999
Q ss_pred EEEEecccCcce-----------------eEEeecccccccccCCCCeEEEEeccCCC
Q 021160 261 HVLRLQRRQTLA-----------------YRERRYNAADFESDEEEGETYLLGFSDSD 301 (316)
Q Consensus 261 ~~w~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 301 (316)
++||+++++... ...+.|++..+.++..+|.|++||...++
T Consensus 274 ~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~ 331 (380)
T 3iz6_a 274 RLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAE 331 (380)
T ss_dssp EEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCC
T ss_pred EEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCc
Confidence 999998653221 12677888899999999999999976554
No 29
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=4e-34 Score=237.17 Aligned_cols=237 Identities=14% Similarity=0.183 Sum_probs=193.2
Q ss_pred CCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEe
Q 021160 31 PMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY 110 (316)
Q Consensus 31 ~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~ 110 (316)
.||.+.|++++|+|+++++|++|+.|++|++|++...... ...... ...+|...|.+++|+|++++|+++
T Consensus 14 ~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~---------~~~~~~-~~~~h~~~v~~~~~s~dg~~l~s~ 83 (319)
T 3frx_A 14 EGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQK---------FGVPVR-SFKGHSHIVQDCTLTADGAYALSA 83 (319)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTE---------EEEEEE-EEECCSSCEEEEEECTTSSEEEEE
T ss_pred ccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCcc---------ccccce-EEeCCcccEEEEEECCCCCEEEEE
Confidence 4799999999999977689999999999999998743210 000112 237899999999999999988885
Q ss_pred -cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCeeEEE
Q 021160 111 -NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRL 189 (316)
Q Consensus 111 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~ 189 (316)
.|++|++||+.++ +....+.+|... |.+++| +|++.+|++|+.|+.|++||++ ++++..
T Consensus 84 s~D~~v~~wd~~~~----------------~~~~~~~~h~~~--v~~~~~-~~~~~~l~s~s~D~~i~vwd~~-~~~~~~ 143 (319)
T 3frx_A 84 SWDKTLRLWDVATG----------------ETYQRFVGHKSD--VMSVDI-DKKASMIISGSRDKTIKVWTIK-GQCLAT 143 (319)
T ss_dssp ETTSEEEEEETTTT----------------EEEEEEECCSSC--EEEEEE-CTTSCEEEEEETTSCEEEEETT-SCEEEE
T ss_pred eCCCEEEEEECCCC----------------CeeEEEccCCCc--EEEEEE-cCCCCEEEEEeCCCeEEEEECC-CCeEEE
Confidence 7999999999988 678889999977 999999 9999999999999999999997 567788
Q ss_pred eecCccceEEEEEcCCC------CeEEEEeCCCcEEEecCCCCC-CCCCCCCcccceeeeecCCCCceeEEecCCCeEEE
Q 021160 190 MVGDRHVVNQLEPHPHI------PMFATCGIEKTVKLWAPMPTD-FPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHV 262 (316)
Q Consensus 190 ~~~~~~~v~~~~~~p~~------~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~ 262 (316)
+.+|...|.+++|+|.. ..|++++.|+.|++||++..+ ...+.+|...+..+. +++++.++++++.|+.|++
T Consensus 144 ~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~-~sp~g~~l~s~~~dg~i~i 222 (319)
T 3frx_A 144 LLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLT-ASPDGTLIASAGKDGEIML 222 (319)
T ss_dssp ECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEE-ECTTSSEEEEEETTCEEEE
T ss_pred EeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEE-EcCCCCEEEEEeCCCeEEE
Confidence 88999999999999954 479999999999999998876 556677888887666 8889999999999999999
Q ss_pred EEecccCcce--------e-EEeecccccccccCCCCeEEEEeccC
Q 021160 263 LRLQRRQTLA--------Y-RERRYNAADFESDEEEGETYLLGFSD 299 (316)
Q Consensus 263 w~~~~~~~~~--------~-~~~~~~~~~~~~~~~~~~v~~~~~~~ 299 (316)
||+.+++... . ..+.|++..++...++ .+.+|++..
T Consensus 223 wd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~ 267 (319)
T 3frx_A 223 WNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATAT-GIKVFSLDP 267 (319)
T ss_dssp EETTTTEEEEEEECCSCEEEEEECSSSSEEEEEETT-EEEEEEETT
T ss_pred EECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcCC-CcEEEEeCc
Confidence 9988753321 1 1567777766665443 366666543
No 30
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=3.9e-33 Score=232.35 Aligned_cols=255 Identities=10% Similarity=0.063 Sum_probs=208.1
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
+|.|++||+.+......+..... .+|...|.+++|+|++ ++|++++.|+.|++||+.+++.
T Consensus 71 dg~i~iw~~~~~~~~~~~~~~~~------~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~~d~~~~~~------------ 131 (337)
T 1gxr_A 71 KGCVKVWDISHPGNKSPVSQLDC------LNRDNYIRSCKLLPDG-CTLIVGGEASTLSIWDLAAPTP------------ 131 (337)
T ss_dssp BSEEEEEETTSTTCCSCSEEEEC------SCTTSBEEEEEECTTS-SEEEEEESSSEEEEEECCCC--------------
T ss_pred CCeEEEEECCCCCceeeeecccc------cCCCCcEEEEEEcCCC-CEEEEEcCCCcEEEEECCCCCc------------
Confidence 58899999987653322221111 1378899999999998 8999999999999999987651
Q ss_pred cccccccCCCcccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEe
Q 021160 82 FCPRHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFF 160 (316)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 160 (316)
........|...+.+++|+|++++++++ .|+.|++||++++ +....+..|... +.+++|
T Consensus 132 -~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~----------------~~~~~~~~~~~~--i~~~~~- 191 (337)
T 1gxr_A 132 -RIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ----------------TLVRQFQGHTDG--ASCIDI- 191 (337)
T ss_dssp -EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT----------------EEEEEECCCSSC--EEEEEE-
T ss_pred -ceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC----------------ceeeeeecccCc--eEEEEE-
Confidence 1112225678899999999999987774 7999999999887 677788888866 999999
Q ss_pred cCCCcEEEEeccCCeEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCCCCCCCCCccccee
Q 021160 161 GPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMK 240 (316)
Q Consensus 161 ~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 240 (316)
+|++.++++++.|+.|++||+++++.+..+. +...+.+++|+|++++|++++.|+.|++||++..+...+..|...+..
T Consensus 192 ~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~v~~ 270 (337)
T 1gxr_A 192 SNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLS 270 (337)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECCCSSCEEE
T ss_pred CCCCCEEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEcCCccceeE
Confidence 9999999999999999999999999887775 678899999999999999999999999999998886667778777766
Q ss_pred eeecCCCCceeEEecCCCeEEEEEecccCccee---------EEeecccccccccCCCCeEEEEec
Q 021160 241 ANKQGREDHSRITLTPDVIMHVLRLQRRQTLAY---------RERRYNAADFESDEEEGETYLLGF 297 (316)
Q Consensus 241 ~~~~~~~~~~~~s~~~d~~~~~w~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~v~~~~~ 297 (316)
+. ++++++++++++.|+.+++|++.+++.... ..+.|++..+.....+|.+.+|++
T Consensus 271 ~~-~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 271 LK-FAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp EE-ECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred EE-ECCCCCEEEEecCCCcEEEEECCCCeEEEEecCCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 66 788899999999999999999887644322 146677777777778888888875
No 31
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-33 Score=235.10 Aligned_cols=240 Identities=15% Similarity=0.233 Sum_probs=183.3
Q ss_pred CCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccc-cCCCcccEEEEEEccCCCeEEEe
Q 021160 32 MNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHL-IGKNNIHITGLAYSNTSELLISY 110 (316)
Q Consensus 32 gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~s~ 110 (316)
+|..+|.+++|+|+ +|++|+.|+.|++||+..+... ....+ ..+|...|.+++|+|++++|+++
T Consensus 12 ~h~~~v~~~~~s~~---~las~~~D~~i~lw~~~~~~~~------------~~~~~~~~~h~~~v~~v~~sp~~~~las~ 76 (330)
T 2hes_X 12 LYKEKIWSFDFSQG---ILATGSTDRKIKLVSVKYDDFT------------LIDVLDETAHKKAIRSVAWRPHTSLLAAG 76 (330)
T ss_dssp CCSSCEEEEEEETT---EEEEEESSSCEEEEECSSSCCE------------EEEEECTTCCCSCEEEEEECTTSSEEEEE
T ss_pred cCCCceeeeccCCC---EEEEEcCCCEEEEEEecCCCeE------------EEEEEecCCccCCEEEEEECCCCCEEEEE
Confidence 58999999999984 8999999999999999865310 11222 13489999999999999988885
Q ss_pred -cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccC----Ce
Q 021160 111 -NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKG----GK 185 (316)
Q Consensus 111 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~----~~ 185 (316)
.|++|++||+..... ..........+.+|... |.+++| +|++++|++|+.|+.|++||+.. .+
T Consensus 77 s~D~~v~iw~~~~~~~---------~~~~~~~~~~~~~h~~~--V~~v~~-sp~g~~las~s~D~~v~iwd~~~~~~~~~ 144 (330)
T 2hes_X 77 SFDSTVSIWAKEESAD---------RTFEMDLLAIIEGHENE--VKGVAW-SNDGYYLATCSRDKSVWIWETDESGEEYE 144 (330)
T ss_dssp ETTSCEEEEEC----------------CCCEEEEEEC----C--EEEEEE-CTTSCEEEEEETTSCEEEEECCTTCCCCE
T ss_pred eCCCcEEEEEcccCcC---------ccccceeEEEEcCCCCc--EEEEEE-CCCCCEEEEEeCCCEEEEEeccCCCCCeE
Confidence 799999999864310 00011345667888866 999999 99999999999999999999943 35
Q ss_pred eEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCC---CCCCCCCCcccceeeeecCCC--CceeEEecCCCeE
Q 021160 186 LVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPT---DFPPLPDNAEKIMKANKQGRE--DHSRITLTPDVIM 260 (316)
Q Consensus 186 ~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~--~~~~~s~~~d~~~ 260 (316)
++..+.+|...|.+++|+|++.+|++++.|++|++||...+ .+..+.+|...+..+. +.++ +..+++++.|+.+
T Consensus 145 ~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~-~~~~~~~~~l~s~s~D~~v 223 (330)
T 2hes_X 145 CISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSD-FDKTEGVFRLCSGSDDSTV 223 (330)
T ss_dssp EEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEE-ECCSSSSCEEEEEETTSCE
T ss_pred EEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEE-ecCCCCeeEEEEEeCCCeE
Confidence 67788899999999999999999999999999999998765 2566778888887776 5665 6689999999999
Q ss_pred EEEEecccC------------------cceeE-EeecccccccccCCCCeEEEEeccCC
Q 021160 261 HVLRLQRRQ------------------TLAYR-ERRYNAADFESDEEEGETYLLGFSDS 300 (316)
Q Consensus 261 ~~w~~~~~~------------------~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~ 300 (316)
++|++.... ..++. .+.+. ..+++...+|.|.+|+..++
T Consensus 224 ~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~-~~l~s~~~dg~v~iw~~~~~ 281 (330)
T 2hes_X 224 RVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFN-GLIASVGADGVLAVYEEVDG 281 (330)
T ss_dssp EEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTT-SCEEEEETTSCEEEEEEETT
T ss_pred EEEEecCCCccccceeEEeeecccccccceEEEEEcCC-CEEEEEeCCCEEEEEEcCCC
Confidence 999986531 11122 33433 36777888899999997654
No 32
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.3e-33 Score=257.68 Aligned_cols=256 Identities=17% Similarity=0.192 Sum_probs=198.6
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
+|.|++||+............ ...+|...|.+++|+|++ ++|++|+.|+.|++||+.+++
T Consensus 404 D~~i~~W~~~~~~~~~~~~~~------~~~~h~~~v~~v~~s~~g-~~l~sgs~Dg~v~vwd~~~~~------------- 463 (694)
T 3dm0_A 404 DKSIILWKLTKDDKAYGVAQR------RLTGHSHFVEDVVLSSDG-QFALSGSWDGELRLWDLAAGV------------- 463 (694)
T ss_dssp TSEEEEEECCCSTTCSCEEEE------EEECCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTE-------------
T ss_pred CCcEEEEEccCCCcccccccc------eecCCCCcEEEEEECCCC-CEEEEEeCCCcEEEEECCCCc-------------
Confidence 689999999865432111111 112589999999999999 899999999999999999876
Q ss_pred cccccccCCCcccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEe
Q 021160 82 FCPRHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFF 160 (316)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 160 (316)
+...+ .+|...|.+++|+|++++|+++ .|++|++||..... .........+|... |.+++|
T Consensus 464 -~~~~~-~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~-------------~~~~~~~~~~h~~~--v~~~~~- 525 (694)
T 3dm0_A 464 -STRRF-VGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGEC-------------KYTISEGGEGHRDW--VSCVRF- 525 (694)
T ss_dssp -EEEEE-ECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCE-------------EEEECSSTTSCSSC--EEEEEE-
T ss_pred -ceeEE-eCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCc-------------ceeeccCCCCCCCc--EEEEEE-
Confidence 33333 6899999999999999988884 79999999986540 00001112356655 999999
Q ss_pred cCCC--cEEEEeccCCeEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC-CCCCCCCccc
Q 021160 161 GPND--EYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD-FPPLPDNAEK 237 (316)
Q Consensus 161 ~~~~--~~l~~~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~~~ 237 (316)
+|++ ..+++++.|+.|++||++++++...+.+|.+.|.+++|+|++++|++++.|+.|++||+++++ +..+. +...
T Consensus 526 ~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~-~~~~ 604 (694)
T 3dm0_A 526 SPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLE-ANSV 604 (694)
T ss_dssp CSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCB-CSSC
T ss_pred eCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEec-CCCc
Confidence 8876 589999999999999999999999999999999999999999999999999999999998877 44443 3344
Q ss_pred ceeeeecCCCCceeEEecCCCeEEEEEecccCcce-----------------------------eEEeecccccccccCC
Q 021160 238 IMKANKQGREDHSRITLTPDVIMHVLRLQRRQTLA-----------------------------YRERRYNAADFESDEE 288 (316)
Q Consensus 238 ~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~ 288 (316)
+..+ .+++++.++++++ ++.+++||+.++.... ...++|++..+.++..
T Consensus 605 v~~~-~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~ 682 (694)
T 3dm0_A 605 IHAL-CFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYT 682 (694)
T ss_dssp EEEE-EECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEET
T ss_pred EEEE-EEcCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcC
Confidence 4444 4778777666654 5669999987653211 1257888999999999
Q ss_pred CCeEEEEecc
Q 021160 289 EGETYLLGFS 298 (316)
Q Consensus 289 ~~~v~~~~~~ 298 (316)
+|.|.+|++.
T Consensus 683 Dg~i~iW~i~ 692 (694)
T 3dm0_A 683 DGVIRVWGIG 692 (694)
T ss_dssp TSEEEEEEC-
T ss_pred CCeEEEEecc
Confidence 9999999975
No 33
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.7e-33 Score=240.14 Aligned_cols=220 Identities=15% Similarity=0.223 Sum_probs=180.6
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
+|.|+|||+.+.+....+. +|...|.+++|+|++ .+|++|+.|+.|++||++++++
T Consensus 144 d~~i~iwd~~~~~~~~~~~-----------~h~~~v~~~~~~p~~-~~l~s~s~d~~v~iwd~~~~~~------------ 199 (393)
T 1erj_A 144 DRLIRIWDIENRKIVMILQ-----------GHEQDIYSLDYFPSG-DKLVSGSGDRTVRIWDLRTGQC------------ 199 (393)
T ss_dssp TSCEEEEETTTTEEEEEEC-----------CCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEE------------
T ss_pred CCeEEEEECCCCcEEEEEc-----------cCCCCEEEEEEcCCC-CEEEEecCCCcEEEEECCCCee------------
Confidence 6899999998765433332 488899999999999 8999999999999999998762
Q ss_pred cccccccCCCcccEEEEEEcc-CCCeEEEe-cCCcEEEEEcCCCCCCCCccCCccccccCCCccee-------eCCcCCc
Q 021160 82 FCPRHLIGKNNIHITGLAYSN-TSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVY-------SGHRNSQ 152 (316)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~~~-~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 152 (316)
...+ .+...+.+++|+| ++++++++ .|+.|++||++++ ..+..+ .+|...
T Consensus 200 --~~~~--~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~----------------~~~~~~~~~~~~~~~h~~~- 258 (393)
T 1erj_A 200 --SLTL--SIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETG----------------FLVERLDSENESGTGHKDS- 258 (393)
T ss_dssp --EEEE--ECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTC----------------CEEEEEC------CCCSSC-
T ss_pred --EEEE--EcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCC----------------cEEEeecccccCCCCCCCC-
Confidence 2222 2456799999999 78888885 7999999999876 343333 467655
Q ss_pred eeeeEEEecCCCcEEEEeccCCeEEEEeccCC------------eeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEE
Q 021160 153 TVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGG------------KLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKL 220 (316)
Q Consensus 153 ~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~------------~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~i 220 (316)
|.+++| +|++++|++|+.|+.|++||+++. .+...+.+|...|.+++|+|++++|++++.|+.|++
T Consensus 259 -v~~v~~-~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~i 336 (393)
T 1erj_A 259 -VYSVVF-TRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLF 336 (393)
T ss_dssp -EEEEEE-CTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEE
T ss_pred -EEEEEE-CCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEE
Confidence 999999 999999999999999999998753 345677889999999999999999999999999999
Q ss_pred ecCCCCC-CCCCCCCcccceeeeecC-----CCCceeEEecCCCeEEEEEeccc
Q 021160 221 WAPMPTD-FPPLPDNAEKIMKANKQG-----REDHSRITLTPDVIMHVLRLQRR 268 (316)
Q Consensus 221 wd~~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~~~s~~~d~~~~~w~~~~~ 268 (316)
||+.+++ +..+.+|...+..+++.. +++.++++++.|+.+++|++.+.
T Consensus 337 wd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 337 WDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred EECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECccccc
Confidence 9999887 667778888887776432 46789999999999999998754
No 34
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.2e-33 Score=234.01 Aligned_cols=227 Identities=12% Similarity=0.119 Sum_probs=177.4
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCC--CCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCc
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPR--NPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPV 79 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~--~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~ 79 (316)
+|.|+|||+++.+....... .+|...|.+++|+|. + ++|++|+.|++|++||+++++..
T Consensus 34 D~~v~lwd~~~~~~~~~~~l---------~gH~~~V~~v~~~~~~~~-~~l~s~s~D~~v~iWd~~~~~~~--------- 94 (316)
T 3bg1_A 34 DRSVKIFDVRNGGQILIADL---------RGHEGPVWQVAWAHPMYG-NILASCSYDRKVIIWREENGTWE--------- 94 (316)
T ss_dssp TTEEEEEEEETTEEEEEEEE---------ECCSSCEEEEEECCGGGS-SCEEEEETTSCEEEECCSSSCCC---------
T ss_pred CCeEEEEEecCCCcEEEEEE---------cCCCccEEEEEeCCCCCC-CEEEEEECCCEEEEEECCCCcce---------
Confidence 68999999987643222222 258999999999863 5 89999999999999999876411
Q ss_pred eecccccccCCCcccEEEEEEccC--CCeEEEe-cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeee
Q 021160 80 DTFCPRHLIGKNNIHITGLAYSNT--SELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKG 156 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 156 (316)
... ...+|...|.+++|+|+ +.+|+++ .|++|++||++.... ......+.+|... +.+
T Consensus 95 ---~~~-~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~-------------~~~~~~~~~h~~~--v~~ 155 (316)
T 3bg1_A 95 ---KSH-EHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQ-------------WEVKKINNAHTIG--CNA 155 (316)
T ss_dssp ---EEE-EECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSC-------------EEECCBTTSSSSC--BCC
T ss_pred ---EEE-EccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCC-------------cceeeeeccccCC--cce
Confidence 111 22678999999999998 6778875 799999999976410 0113445667755 899
Q ss_pred EEEecCC-----------------CcEEEEeccCCeEEEEeccCC---eeEEEeecCccceEEEEEcCCC----CeEEEE
Q 021160 157 VNFFGPN-----------------DEYVMSGSDCGHLFIWKKKGG---KLVRLMVGDRHVVNQLEPHPHI----PMFATC 212 (316)
Q Consensus 157 ~~~~~~~-----------------~~~l~~~~~dg~v~~wd~~~~---~~~~~~~~~~~~v~~~~~~p~~----~~l~s~ 212 (316)
++| +|+ +.+|++|+.|+.|++||++.+ +++..+.+|...|.+++|+|++ ++|+++
T Consensus 156 ~~~-~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~ 234 (316)
T 3bg1_A 156 VSW-APAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASC 234 (316)
T ss_dssp CEE-CCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEE
T ss_pred EEE-ccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEE
Confidence 998 776 478999999999999999755 4677788999999999999986 789999
Q ss_pred eCCCcEEEecCCCCC-----CCCCCCCcccceeeeecCCCCceeEEecCCCeEEEEEeccc
Q 021160 213 GIEKTVKLWAPMPTD-----FPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR 268 (316)
Q Consensus 213 ~~d~~i~iwd~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~ 268 (316)
+.|++|++|++.... ...+..|...+..++ |++++.++++++.|+.+++|+....
T Consensus 235 s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~-~sp~g~~las~~~D~~v~lw~~~~~ 294 (316)
T 3bg1_A 235 SQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVS-WSITANILAVSGGDNKVTLWKESVD 294 (316)
T ss_dssp ETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEE-ECTTTCCEEEEESSSCEEEEEECTT
T ss_pred cCCCeEEEEEccCccccchhhhhhhcCCCcEEEEE-EcCCCCEEEEEcCCCeEEEEEECCC
Confidence 999999999987631 223445666676666 8899999999999999999997643
No 35
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=6e-34 Score=235.80 Aligned_cols=236 Identities=16% Similarity=0.207 Sum_probs=187.1
Q ss_pred CCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccC--CCeEE
Q 021160 31 PMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNT--SELLI 108 (316)
Q Consensus 31 ~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~ 108 (316)
.+|...|++++|+|++ ++|++|+.|++|++||+.+++.. .... ..+|...|.+++|+++ +++|+
T Consensus 10 ~~H~~~V~~v~~s~~g-~~lasgs~D~~v~lwd~~~~~~~------------~~~~-l~gH~~~V~~v~~~~~~~~~~l~ 75 (316)
T 3bg1_A 10 TSHEDMIHDAQMDYYG-TRLATCSSDRSVKIFDVRNGGQI------------LIAD-LRGHEGPVWQVAWAHPMYGNILA 75 (316)
T ss_dssp ----CCEEEEEECGGG-CEEEEEETTTEEEEEEEETTEEE------------EEEE-EECCSSCEEEEEECCGGGSSCEE
T ss_pred ccccCeEEEeeEcCCC-CEEEEEeCCCeEEEEEecCCCcE------------EEEE-EcCCCccEEEEEeCCCCCCCEEE
Confidence 3699999999999999 89999999999999999876410 1122 2789999999999863 77787
Q ss_pred Ee-cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCC--CcEEEEeccCCeEEEEeccCCe
Q 021160 109 SY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPN--DEYVMSGSDCGHLFIWKKKGGK 185 (316)
Q Consensus 109 s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~l~~~~~dg~v~~wd~~~~~ 185 (316)
++ .|++|++||++++. ......+.+|... |.+++| +|+ +.+|++|+.|+.|++||++.+.
T Consensus 76 s~s~D~~v~iWd~~~~~--------------~~~~~~~~~h~~~--V~~v~~-~p~~~g~~lasgs~D~~i~lwd~~~~~ 138 (316)
T 3bg1_A 76 SCSYDRKVIIWREENGT--------------WEKSHEHAGHDSS--VNSVCW-APHDYGLILACGSSDGAISLLTYTGEG 138 (316)
T ss_dssp EEETTSCEEEECCSSSC--------------CCEEEEECCCSSC--CCEEEE-CCTTTCSCEEEECSSSCEEEEEECSSS
T ss_pred EEECCCEEEEEECCCCc--------------ceEEEEccCCCCc--eEEEEE-CCCCCCcEEEEEcCCCCEEEEecCCCC
Confidence 74 79999999998751 0234556778866 999999 887 7899999999999999998763
Q ss_pred e---EEEeecCccceEEEEEcCC-----------------CCeEEEEeCCCcEEEecCCCC----CCCCCCCCcccceee
Q 021160 186 L---VRLMVGDRHVVNQLEPHPH-----------------IPMFATCGIEKTVKLWAPMPT----DFPPLPDNAEKIMKA 241 (316)
Q Consensus 186 ~---~~~~~~~~~~v~~~~~~p~-----------------~~~l~s~~~d~~i~iwd~~~~----~~~~~~~~~~~~~~~ 241 (316)
. ...+.+|...|.+++|+|+ +++|++++.|+.|++||++.. ....+.+|...+..+
T Consensus 139 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v 218 (316)
T 3bg1_A 139 QWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDV 218 (316)
T ss_dssp CEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEE
T ss_pred CcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEE
Confidence 2 3445679999999999997 468999999999999999754 255677898888777
Q ss_pred eecCCCC----ceeEEecCCCeEEEEEeccc-------------CcceeE-EeecccccccccCCCCeEEEEecc
Q 021160 242 NKQGRED----HSRITLTPDVIMHVLRLQRR-------------QTLAYR-ERRYNAADFESDEEEGETYLLGFS 298 (316)
Q Consensus 242 ~~~~~~~----~~~~s~~~d~~~~~w~~~~~-------------~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~ 298 (316)
. +++++ .++++++.|+.+++|++... ...++. .+.|++..+++...++.|.+|+..
T Consensus 219 ~-~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 219 A-WAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp E-CCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred E-ecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 7 66654 78999999999999998752 111222 678889999999999999999875
No 36
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.5e-32 Score=230.07 Aligned_cols=240 Identities=14% Similarity=0.174 Sum_probs=190.2
Q ss_pred CCCccceEEEEE-----CC-CCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCC
Q 021160 31 PMNSIRLNAIVI-----DP-RNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTS 104 (316)
Q Consensus 31 ~gh~~~v~~~~~-----~~-~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 104 (316)
.||...|++++| ++ ++ .+|++|+.|++|++||+...+.. .... .......+|...|.+++|+|++
T Consensus 18 ~gH~~~V~~~~~~~s~~~~~d~-~~l~sgs~D~~v~iWd~~~~~~~-------~~~~-~~~~~l~~h~~~V~~~~~~~~~ 88 (343)
T 2xzm_R 18 EGHSDWVTSIVAGFSQKENEDS-PVLISGSRDKTVMIWKLYEEEQN-------GYFG-IPHKALTGHNHFVSDLALSQEN 88 (343)
T ss_dssp ECCSSCEEEEEECCCSSTTCCC-CEEEEEETTSCEEEEEECSSCCS-------SBSE-EEEEEECCCSSCEEEEEECSST
T ss_pred ccchhhhhheeeEEEeecCCCC-CEEEEEcCCCEEEEEECCcCCcc-------cccc-cccchhccCCCceEEEEECCCC
Confidence 369999999999 76 66 89999999999999999765310 0000 1122237899999999999999
Q ss_pred CeEEEe-cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccC
Q 021160 105 ELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKG 183 (316)
Q Consensus 105 ~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~ 183 (316)
.+++++ .|++|++||++++ +....+.+|... |.+++| +|++++|++++.|+.|++||+..
T Consensus 89 ~~l~s~s~D~~v~lwd~~~~----------------~~~~~~~~h~~~--v~~v~~-sp~~~~l~s~~~d~~i~~wd~~~ 149 (343)
T 2xzm_R 89 CFAISSSWDKTLRLWDLRTG----------------TTYKRFVGHQSE--VYSVAF-SPDNRQILSAGAEREIKLWNILG 149 (343)
T ss_dssp TEEEEEETTSEEEEEETTSS----------------CEEEEEECCCSC--EEEEEE-CSSTTEEEEEETTSCEEEEESSS
T ss_pred CEEEEEcCCCcEEEEECCCC----------------cEEEEEcCCCCc--EEEEEE-CCCCCEEEEEcCCCEEEEEeccC
Confidence 988885 7999999999988 677889999976 999999 99999999999999999999984
Q ss_pred CeeEEEee---cCccceEEEEEcCCC----------CeEEEEeCCCcEEEecCCCCCCCCCCCCcccceeeeecCCCCce
Q 021160 184 GKLVRLMV---GDRHVVNQLEPHPHI----------PMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHS 250 (316)
Q Consensus 184 ~~~~~~~~---~~~~~v~~~~~~p~~----------~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (316)
+...... .|...|.+++|+|++ ++|++++.|+.|++||........+.+|...+..+. +++++.+
T Consensus 150 -~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~h~~~v~~~~-~s~~g~~ 227 (343)
T 2xzm_R 150 -ECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTFKAHESNVNHLS-ISPNGKY 227 (343)
T ss_dssp -CEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEEECCSSCEEEEE-ECTTSSE
T ss_pred -CceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCCceeEEEcCccccceEEE-ECCCCCE
Confidence 3333333 688899999999987 689999999999999965444556667888776666 8899999
Q ss_pred eEEecCCCeEEEEEecccCcc---------ee-EEeecccccccccCCCCeEEEEeccCCC
Q 021160 251 RITLTPDVIMHVLRLQRRQTL---------AY-RERRYNAADFESDEEEGETYLLGFSDSD 301 (316)
Q Consensus 251 ~~s~~~d~~~~~w~~~~~~~~---------~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 301 (316)
+++++.|+.+++||+...... +. ..+.|+...++.+ .++.+.+|++..+.
T Consensus 228 l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~ 287 (343)
T 2xzm_R 228 IATGGKDKKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQS 287 (343)
T ss_dssp EEEEETTCEEEEEESSCCSSCSEEEECSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCC
T ss_pred EEEEcCCCeEEEEECCCCcccceeecCCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCC
Confidence 999999999999998432111 11 2577777766654 35568999987654
No 37
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=2.8e-33 Score=240.59 Aligned_cols=222 Identities=11% Similarity=0.105 Sum_probs=177.8
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
+|.|++||+.+.+....+ .+|...|++++|+|++ .+|++|+.|+.|++||+++++
T Consensus 118 dg~i~iwd~~~~~~~~~~-----------~~h~~~v~~~~~~~~~-~~l~s~s~d~~i~iwd~~~~~------------- 172 (420)
T 3vl1_A 118 EGDIKVLDSNFNLQREID-----------QAHVSEITKLKFFPSG-EALISSSQDMQLKIWSVKDGS------------- 172 (420)
T ss_dssp TSCEEEECTTSCEEEEET-----------TSSSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCC-------------
T ss_pred CCCEEEEeCCCcceeeec-----------ccccCccEEEEECCCC-CEEEEEeCCCeEEEEeCCCCc-------------
Confidence 588999998765432211 2489999999999998 899999999999999999876
Q ss_pred cccccccCCCcccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCc---CC------
Q 021160 82 FCPRHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHR---NS------ 151 (316)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~------ 151 (316)
....+ .+|...|.+++|+|++++|+++ .|+.|++||++++ +....+..+. ..
T Consensus 173 -~~~~~-~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~----------------~~~~~~~~~~~~~~~v~~~~~ 234 (420)
T 3vl1_A 173 -NPRTL-IGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTG----------------TTIHTFNRKENPHDGVNSIAL 234 (420)
T ss_dssp -CCEEE-ECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTT----------------EEEEEECBTTBTTCCEEEEEE
T ss_pred -CceEE-cCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCC----------------ceeEEeecCCCCCCCccEEEE
Confidence 33333 6789999999999999988874 7999999999887 4444444321 11
Q ss_pred -------------ceeeeEEEecCCCcEEEEeccCCeEEEEeccCCeeEEEee-cCccceEEEEEcCCCC-eEEEEeCCC
Q 021160 152 -------------QTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMV-GDRHVVNQLEPHPHIP-MFATCGIEK 216 (316)
Q Consensus 152 -------------~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~-~~~~~v~~~~~~p~~~-~l~s~~~d~ 216 (316)
..+.+++| +|++.+|++|+.||.|++||+++++.+..+. .|...|.+++|+|+++ +|++++.||
T Consensus 235 ~~~~~~~~~~~~~~~v~~~~~-s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg 313 (420)
T 3vl1_A 235 FVGTDRQLHEISTSKKNNLEF-GTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENG 313 (420)
T ss_dssp EECCCSSCGGGCCCCCCTTCS-SCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTS
T ss_pred ecCCcceeeecccCcccceEE-cCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCC
Confidence 22556666 8899999999999999999999988777765 5788999999999999 899999999
Q ss_pred cEEEecCCCCC--CCCCCCCcccceeeeecCCCCceeEEecCCCeEEEEEeccc
Q 021160 217 TVKLWAPMPTD--FPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR 268 (316)
Q Consensus 217 ~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~ 268 (316)
.|++||++++. +..+..|....+...++ +++.++++++.|+.+++|++...
T Consensus 314 ~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~ 366 (420)
T 3vl1_A 314 MLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISDP 366 (420)
T ss_dssp EEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCT
T ss_pred eEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEeccCC
Confidence 99999998864 45555544444455434 46789999999999999999874
No 38
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.8e-33 Score=243.04 Aligned_cols=256 Identities=14% Similarity=0.080 Sum_probs=186.6
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
+|.|+|||+.+.+....+.. .||.+.|++++|+|.++.+|++|+.||+|++||++++...
T Consensus 141 dg~i~lWd~~~~~~~~~~~~---------~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~----------- 200 (435)
T 4e54_B 141 GGDIMLWNFGIKDKPTFIKG---------IGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILR----------- 200 (435)
T ss_dssp TSCEEEECSSCCSCCEEECC---------CSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEE-----------
T ss_pred CCEEEEEECCCCCceeEEEc---------cCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCcee-----------
Confidence 68999999987765444432 2689999999999965589999999999999999865421
Q ss_pred cccccccCCCcccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEe
Q 021160 82 FCPRHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFF 160 (316)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 160 (316)
.......+...+.+++|+|++++|+++ .|+.|++||++.. .+..+.+|... |.+++|
T Consensus 201 --~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~-----------------~~~~~~~h~~~--v~~v~~- 258 (435)
T 4e54_B 201 --VFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK-----------------ELWNLRMHKKK--VTHVAL- 258 (435)
T ss_dssp --EEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC-----------------BCCCSBCCSSC--EEEEEE-
T ss_pred --EEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc-----------------eeEEEecccce--EEeeee-
Confidence 111113345567899999999988885 7999999998764 56678888866 999999
Q ss_pred cCCCc-EEEEeccCCeEEEEeccCCeeEEE---eecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC-CCCCCCCc
Q 021160 161 GPNDE-YVMSGSDCGHLFIWKKKGGKLVRL---MVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD-FPPLPDNA 235 (316)
Q Consensus 161 ~~~~~-~l~~~~~dg~v~~wd~~~~~~~~~---~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~ 235 (316)
+|++. ++++|+.|+.|++||+++.+.... ..+|...|++++|+|++++|++++.|+.|++||+.... ...+..|.
T Consensus 259 ~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~ 338 (435)
T 4e54_B 259 NPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHP 338 (435)
T ss_dssp CTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCC
T ss_pred cCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEeccc
Confidence 78765 788999999999999987765433 35789999999999999999999999999999998765 22222221
Q ss_pred c------cceeeeecCCCCceeEEe------------cCCCeEEEEEecccCccee------------EEeecccccccc
Q 021160 236 E------KIMKANKQGREDHSRITL------------TPDVIMHVLRLQRRQTLAY------------RERRYNAADFES 285 (316)
Q Consensus 236 ~------~~~~~~~~~~~~~~~~s~------------~~d~~~~~w~~~~~~~~~~------------~~~~~~~~~~~~ 285 (316)
. ..+... +.+++..++++ ..++.|++|+..+++.... ..+.|++..+++
T Consensus 339 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~las 417 (435)
T 4e54_B 339 HRHFQHLTPIKAA-WHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLAS 417 (435)
T ss_dssp CCCCSSSCCCBCE-ECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEE
T ss_pred ccccccceeEEEE-EcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEE
Confidence 1 111222 33333333333 2346799999877543321 147788888887
Q ss_pred cCCCCeEEEEeccCCC
Q 021160 286 DEEEGETYLLGFSDSD 301 (316)
Q Consensus 286 ~~~~~~v~~~~~~~~~ 301 (316)
+. ++.|.+|+..++.
T Consensus 418 g~-d~~i~iW~~~~gk 432 (435)
T 4e54_B 418 AM-GYHILIWSQQEAR 432 (435)
T ss_dssp EC-SSEEEECCCC---
T ss_pred Ec-CCcEEEEECCcCe
Confidence 65 5689999987764
No 39
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=8.8e-33 Score=237.51 Aligned_cols=251 Identities=15% Similarity=0.096 Sum_probs=200.1
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
+|.|++||+.+.+....+.. | ..+....|+|++ ++|++|+.||.|++||+.+++
T Consensus 77 d~~v~i~d~~~~~~~~~~~~-----------~-~~~~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~------------- 130 (420)
T 3vl1_A 77 DGHDFLFNTIIRDGSKMLKR-----------A-DYTAVDTAKLQM-RRFILGTTEGDIKVLDSNFNL------------- 130 (420)
T ss_dssp TTEEEEEECCSEETTTTSCS-----------C-CEEEEEEECSSS-CEEEEEETTSCEEEECTTSCE-------------
T ss_pred CCcEEEEEecccceeeEEec-----------C-CceEEEEEecCC-CEEEEEECCCCEEEEeCCCcc-------------
Confidence 57899999877654332221 2 334555788988 899999999999999998775
Q ss_pred cccccccCCCcccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEe
Q 021160 82 FCPRHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFF 160 (316)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 160 (316)
.. ....+|...|.+++|+|++++|+++ .|+.|++||+.++ +....+.+|... |.+++|
T Consensus 131 -~~-~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~----------------~~~~~~~~h~~~--v~~~~~- 189 (420)
T 3vl1_A 131 -QR-EIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDG----------------SNPRTLIGHRAT--VTDIAI- 189 (420)
T ss_dssp -EE-EETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC----------------CCCEEEECCSSC--EEEEEE-
T ss_pred -ee-eecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCC----------------cCceEEcCCCCc--EEEEEE-
Confidence 22 2236899999999999999988885 7999999999987 678888999876 999999
Q ss_pred cCCCcEEEEeccCCeEEEEeccCCeeEEEeecC---c---------------------cceEEEEEcCCCCeEEEEeCCC
Q 021160 161 GPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGD---R---------------------HVVNQLEPHPHIPMFATCGIEK 216 (316)
Q Consensus 161 ~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~---~---------------------~~v~~~~~~p~~~~l~s~~~d~ 216 (316)
+|++.+|++++.|+.|++||+++++.+..+..| . ..+.+++|+|++++|++++.||
T Consensus 190 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg 269 (420)
T 3vl1_A 190 IDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSG 269 (420)
T ss_dssp ETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTS
T ss_pred cCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCC
Confidence 899999999999999999999999998888753 2 3455566789999999999999
Q ss_pred cEEEecCCCCC-CCCC-CCCcccceeeeecCCCCc-eeEEecCCCeEEEEEecccCccee-----------EEeeccccc
Q 021160 217 TVKLWAPMPTD-FPPL-PDNAEKIMKANKQGREDH-SRITLTPDVIMHVLRLQRRQTLAY-----------RERRYNAAD 282 (316)
Q Consensus 217 ~i~iwd~~~~~-~~~~-~~~~~~~~~~~~~~~~~~-~~~s~~~d~~~~~w~~~~~~~~~~-----------~~~~~~~~~ 282 (316)
.|++||++.++ ...+ ..|...+..+. +++++. ++++++.|+.+++||+.+.+.+.. ....++...
T Consensus 270 ~i~i~d~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 348 (420)
T 3vl1_A 270 VITVHNVFSKEQTIQLPSKFTCSCNSLT-VDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFAAGAL 348 (420)
T ss_dssp CEEEEETTTCCEEEEECCTTSSCEEEEE-ECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEEETTEE
T ss_pred eEEEEECCCCceeEEcccccCCCceeEE-EeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEeCCCCE
Confidence 99999998876 3333 34666666666 677776 999999999999999987643211 124445667
Q ss_pred ccccCCCCeEEEEeccCC
Q 021160 283 FESDEEEGETYLLGFSDS 300 (316)
Q Consensus 283 ~~~~~~~~~v~~~~~~~~ 300 (316)
+.+...++.|.+|++.+.
T Consensus 349 l~s~~~d~~v~iw~~~~~ 366 (420)
T 3vl1_A 349 FVSSGFDTSIKLDIISDP 366 (420)
T ss_dssp EEEETTTEEEEEEEECCT
T ss_pred EEEecCCccEEEEeccCC
Confidence 888889999999998874
No 40
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.5e-32 Score=230.68 Aligned_cols=259 Identities=9% Similarity=0.093 Sum_probs=202.1
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCC--CcEEEEEecCCcEEEEeCcCCcccCCCCCCCCc
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRN--PNYFAVGGSDEYARVYDIRKCHWYSPISSDTPV 79 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~--~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~ 79 (316)
+|.|+|||+.+.+........ |...|.+++|+|++ ..+|++|+.||.|++||+.+++
T Consensus 43 d~~v~iw~~~~~~~~~~~~~~----------~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~----------- 101 (357)
T 3i2n_A 43 TGVIQLYEIQHGDLKLLREIE----------KAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPE----------- 101 (357)
T ss_dssp CEEEEEEEECSSSEEEEEEEE----------ESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCS-----------
T ss_pred CcEEEEEeCCCCcccceeeec----------ccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCC-----------
Confidence 689999999987765444432 78899999999983 2899999999999999999775
Q ss_pred eecccccccCCCcccEEEEEE------ccCCCeEEEe-cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcC--
Q 021160 80 DTFCPRHLIGKNNIHITGLAY------SNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRN-- 150 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~i~~~~~------~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 150 (316)
.......+|...|.++.| +|++++|+++ .|+.|++||++.+. .....+..+..
T Consensus 102 ---~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~---------------~~~~~~~~~~~~~ 163 (357)
T 3i2n_A 102 ---MPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKD---------------DPVANMEPVQGEN 163 (357)
T ss_dssp ---SCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCS---------------SCSEEECCCTTSC
T ss_pred ---ccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCC---------------CcceeccccCCCC
Confidence 122223688999999955 6788888875 79999999998872 25566655443
Q ss_pred CceeeeEEE---ecCCCcEEEEeccCCeEEEEeccCCeeEEEeecCccceEEEEEcC---CCCeEEEEeCCCcEEEecCC
Q 021160 151 SQTVKGVNF---FGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHP---HIPMFATCGIEKTVKLWAPM 224 (316)
Q Consensus 151 ~~~i~~~~~---~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p---~~~~l~s~~~d~~i~iwd~~ 224 (316)
...+.+++| +++++.++++++.||.|++||+++++.... ..|...|.+++|+| ++.+|++++.|+.|++||++
T Consensus 164 ~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 242 (357)
T 3i2n_A 164 KRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMR 242 (357)
T ss_dssp CCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEE
T ss_pred CCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCc
Confidence 124888883 279999999999999999999999987544 56888999999999 89999999999999999998
Q ss_pred CCC-CCCCC-----CCcccceeeeecCCCCc-eeEEecCCCeEEEEEecccCcc--------------------------
Q 021160 225 PTD-FPPLP-----DNAEKIMKANKQGREDH-SRITLTPDVIMHVLRLQRRQTL-------------------------- 271 (316)
Q Consensus 225 ~~~-~~~~~-----~~~~~~~~~~~~~~~~~-~~~s~~~d~~~~~w~~~~~~~~-------------------------- 271 (316)
... ...+. +|...+..+. +++++. ++++++.|+.+++|++......
T Consensus 243 ~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 321 (357)
T 3i2n_A 243 TQHPTKGFASVSEKAHKSTVWQVR-HLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLST 321 (357)
T ss_dssp EEETTTEEEEEEEECCSSCEEEEE-EETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCS
T ss_pred CCCcccceeeeccCCCcCCEEEEE-ECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCC
Confidence 765 33333 6777776666 677766 8999999999999999753221
Q ss_pred --ee-EEeeccccccc-ccCCCCeEEEEeccCCC
Q 021160 272 --AY-RERRYNAADFE-SDEEEGETYLLGFSDSD 301 (316)
Q Consensus 272 --~~-~~~~~~~~~~~-~~~~~~~v~~~~~~~~~ 301 (316)
+. ..+.|++..+. ++..++.|.+|++...+
T Consensus 322 ~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 322 QPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp SCEEEEEECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred CCeeEEEEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence 11 26788888887 78889999999987643
No 41
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=6.8e-33 Score=247.72 Aligned_cols=244 Identities=18% Similarity=0.285 Sum_probs=199.9
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
+|.|++||+..... ..+ .+|...|.+++|+|++ .++++|+.|+.|++||.. ++
T Consensus 324 d~~i~~w~~~~~~~-~~~-----------~~~~~~v~~~~~s~~g-~~l~~~~~dg~v~~~~~~-~~------------- 376 (577)
T 2ymu_A 324 DKTVKLWNRNGQHL-QTL-----------TGHSSSVWGVAFSPDG-QTIASASDDKTVKLWNRN-GQ------------- 376 (577)
T ss_dssp TSCEEEEETTSCEE-EEE-----------CCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETT-CC-------------
T ss_pred CCeEEEEeCCCCee-EEE-----------eCCCCCEEEEEECCCC-CEEEEEeCCCEEEEEcCC-CC-------------
Confidence 57899999754322 222 1478899999999999 899999999999999964 33
Q ss_pred cccccccCCCcccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEe
Q 021160 82 FCPRHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFF 160 (316)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 160 (316)
....+ .+|...|.+++|+|++++|+++ .|+.|++||... +....+.+|... |.+++|
T Consensus 377 -~~~~~-~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~-----------------~~~~~~~~~~~~--v~~~~~- 434 (577)
T 2ymu_A 377 -LLQTL-TGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG-----------------QLLQTLTGHSSS--VWGVAF- 434 (577)
T ss_dssp -EEEEE-ECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTC-----------------CEEEEEECCSSC--EEEEEE-
T ss_pred -EEEEe-cCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCC-----------------CEEEEecCCCCC--eEEEEE-
Confidence 22222 6788999999999999988885 799999999644 467788889866 999999
Q ss_pred cCCCcEEEEeccCCeEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCCCCCCCCCccccee
Q 021160 161 GPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMK 240 (316)
Q Consensus 161 ~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 240 (316)
+|++++|++++.|+.|++||. +++.+..+.+|...|.+++|+|++++|++++.|+.|++||.....+..+.+|...+..
T Consensus 435 s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~~~~~~~~~h~~~v~~ 513 (577)
T 2ymu_A 435 SPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRG 513 (577)
T ss_dssp CTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETTSCEEEEEECCSSCEEE
T ss_pred CCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCCCEEE
Confidence 999999999999999999996 5778889999999999999999999999999999999999766557778888888877
Q ss_pred eeecCCCCceeEEecCCCeEEEEEecccC--------ccee-EEeecccccccccCCCCeEEEEe
Q 021160 241 ANKQGREDHSRITLTPDVIMHVLRLQRRQ--------TLAY-RERRYNAADFESDEEEGETYLLG 296 (316)
Q Consensus 241 ~~~~~~~~~~~~s~~~d~~~~~w~~~~~~--------~~~~-~~~~~~~~~~~~~~~~~~v~~~~ 296 (316)
++ ++++++++++++.|+.|++||..... ..+. ..+.|++..+.+...|+.|.+||
T Consensus 514 l~-~s~dg~~l~s~~~dg~v~lwd~~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 514 VA-FSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp EE-ECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EE-EcCCCCEEEEEECcCEEEEEeCCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 66 88999999999999999999964321 1111 15677777777777777777775
No 42
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.5e-32 Score=232.60 Aligned_cols=253 Identities=13% Similarity=0.201 Sum_probs=205.0
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
+|.|++||+.+.+....+... |...|.+++|+|++ .+|++|+.||.|++||+.+++
T Consensus 112 d~~v~lw~~~~~~~~~~~~~~----------~~~~v~~v~~s~~~-~~l~~~~~dg~i~iwd~~~~~------------- 167 (401)
T 4aez_A 112 ERNVYVWNADSGSVSALAETD----------ESTYVASVKWSHDG-SFLSVGLGNGLVDIYDVESQT------------- 167 (401)
T ss_dssp TTEEEEEETTTCCEEEEEECC----------TTCCEEEEEECTTS-SEEEEEETTSCEEEEETTTCC-------------
T ss_pred CCeEEEeeCCCCcEeEeeecC----------CCCCEEEEEECCCC-CEEEEECCCCeEEEEECcCCe-------------
Confidence 688999999888766555543 67899999999998 899999999999999999876
Q ss_pred cccccccCCCcccEEEEEEccCCCeEEE-ecCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEe
Q 021160 82 FCPRHLIGKNNIHITGLAYSNTSELLIS-YNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFF 160 (316)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~~~~~~~l~s-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 160 (316)
....+ .+|...|.+++|+ ++++++ +.|+.|++||++... .....+.+|... |.+++|
T Consensus 168 -~~~~~-~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~---------------~~~~~~~~~~~~--v~~~~~- 225 (401)
T 4aez_A 168 -KLRTM-AGHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIAN---------------HQIGTLQGHSSE--VCGLAW- 225 (401)
T ss_dssp -EEEEE-CCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSS---------------CEEEEEECCSSC--EEEEEE-
T ss_pred -EEEEe-cCCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCc---------------ceeeEEcCCCCC--eeEEEE-
Confidence 23333 6889999999994 467776 579999999998541 456778888866 999999
Q ss_pred cCCCcEEEEeccCCeEEEEeccCCeeEEEeecCccceEEEEEcCCCCe-EEEEe--CCCcEEEecCCCCC-CCCCCCCcc
Q 021160 161 GPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPM-FATCG--IEKTVKLWAPMPTD-FPPLPDNAE 236 (316)
Q Consensus 161 ~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~-l~s~~--~d~~i~iwd~~~~~-~~~~~~~~~ 236 (316)
+|++.+|++|+.|+.|++||+++++.+..+..|...|.+++|+|++.. +++++ .|+.|++||+.+++ ...+ .+..
T Consensus 226 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~-~~~~ 304 (401)
T 4aez_A 226 RSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTV-DAGS 304 (401)
T ss_dssp CTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEE-ECSS
T ss_pred cCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEE-eCCC
Confidence 899999999999999999999999999999999999999999997755 66654 79999999999887 3333 3445
Q ss_pred cceeeeecCCCCceeEE--ecCCCeEEEEEecccCcce------------eEEeecccccccccCCCCeEEEEeccCCCC
Q 021160 237 KIMKANKQGREDHSRIT--LTPDVIMHVLRLQRRQTLA------------YRERRYNAADFESDEEEGETYLLGFSDSDA 302 (316)
Q Consensus 237 ~~~~~~~~~~~~~~~~s--~~~d~~~~~w~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 302 (316)
.+..+. +++++..+++ ++.|+.+++|++.++.... ...+.|++..+.+...+|.|.+|++.+++.
T Consensus 305 ~v~~~~-~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~ 383 (401)
T 4aez_A 305 QVTSLI-WSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDH 383 (401)
T ss_dssp CEEEEE-ECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC---
T ss_pred cEEEEE-ECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcc
Confidence 555555 7888888888 5589999999988742211 126788888999999999999999988764
No 43
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.2e-32 Score=238.00 Aligned_cols=205 Identities=14% Similarity=0.163 Sum_probs=167.1
Q ss_pred CCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEcc-CCCeEEEe
Q 021160 32 MNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSN-TSELLISY 110 (316)
Q Consensus 32 gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~s~ 110 (316)
+|...|++++|+|.++++||+|+.||.|+|||+.+++.. .. ....+|...|++++|+| ++++|+++
T Consensus 117 ~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~------------~~-~~~~gH~~~V~~l~f~p~~~~~l~s~ 183 (435)
T 4e54_B 117 PFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKP------------TF-IKGIGAGGSITGLKFNPLNTNQFYAS 183 (435)
T ss_dssp ECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCC------------EE-ECCCSSSCCCCEEEECSSCTTEEEEE
T ss_pred CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCce------------eE-EEccCCCCCEEEEEEeCCCCCEEEEE
Confidence 478889999999977689999999999999999876521 11 11268999999999998 56788885
Q ss_pred -cCCcEEEEEcCCCCCCCCccCCccccccCCCcceee-CCcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCeeEE
Q 021160 111 -NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYS-GHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVR 188 (316)
Q Consensus 111 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~ 188 (316)
.|++|++||+++. ....+. .+.....+.+++| +|++.+|++|+.||.|++||++ ++.+.
T Consensus 184 s~D~~v~iwd~~~~-----------------~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~g~~dg~i~~wd~~-~~~~~ 244 (435)
T 4e54_B 184 SMEGTTRLQDFKGN-----------------ILRVFASSDTINIWFCSLDV-SASSRMVVTGDNVGNVILLNMD-GKELW 244 (435)
T ss_dssp CSSSCEEEEETTSC-----------------EEEEEECCSSCSCCCCCEEE-ETTTTEEEEECSSSBEEEEESS-SCBCC
T ss_pred eCCCEEEEeeccCC-----------------ceeEEeccCCCCccEEEEEE-CCCCCEEEEEeCCCcEeeeccC-cceeE
Confidence 7999999999765 233333 3333334789999 9999999999999999999997 55677
Q ss_pred EeecCccceEEEEEcCCCC-eEEEEeCCCcEEEecCCCCC----CCCCCCCcccceeeeecCCCCceeEEecCCCeEEEE
Q 021160 189 LMVGDRHVVNQLEPHPHIP-MFATCGIEKTVKLWAPMPTD----FPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVL 263 (316)
Q Consensus 189 ~~~~~~~~v~~~~~~p~~~-~l~s~~~d~~i~iwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w 263 (316)
.+.+|...|.+++|+|+++ +|++++.|+.|++||++... +....+|...+..+. +++++.++++++.|+.|++|
T Consensus 245 ~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~-~spdg~~l~s~~~D~~i~iw 323 (435)
T 4e54_B 245 NLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAAC-FSPDGARLLTTDQKSEIRVY 323 (435)
T ss_dssp CSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECC-BCTTSSEEEEEESSSCEEEE
T ss_pred EEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeecccccccee-ECCCCCeeEEEcCCCEEEEE
Confidence 8889999999999999987 58899999999999998765 223356777776665 88999999999999999999
Q ss_pred EecccC
Q 021160 264 RLQRRQ 269 (316)
Q Consensus 264 ~~~~~~ 269 (316)
++.+..
T Consensus 324 d~~~~~ 329 (435)
T 4e54_B 324 SASQWD 329 (435)
T ss_dssp ESSSSS
T ss_pred ECCCCc
Confidence 998754
No 44
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=2e-32 Score=232.68 Aligned_cols=252 Identities=11% Similarity=0.049 Sum_probs=193.4
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
+|.|+|||+.+.+....+.. .+|...|.+++|+|++..+|++++.|+.|++||+++... .
T Consensus 95 dg~i~iwd~~~~~~~~~~~~---------~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~----------~- 154 (383)
T 3ei3_B 95 GGDIILWDYDVQNKTSFIQG---------MGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVI----------Q- 154 (383)
T ss_dssp TSCEEEEETTSTTCEEEECC---------CSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEE----------E-
T ss_pred CCeEEEEeCCCcccceeeec---------CCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCce----------E-
Confidence 58999999988766544432 148899999999994338999999999999999986431 1
Q ss_pred cccccccCCCcccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEe
Q 021160 82 FCPRHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFF 160 (316)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 160 (316)
.......|...|.+++|+|++++|+++ .|+.|++||++. .....+.+|... |.+++|
T Consensus 155 --~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~-----------------~~~~~~~~h~~~--v~~~~~- 212 (383)
T 3ei3_B 155 --VFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDG-----------------HEIFKEKLHKAK--VTHAEF- 212 (383)
T ss_dssp --EEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTS-----------------CEEEEEECSSSC--EEEEEE-
T ss_pred --EEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCC-----------------CEEEEeccCCCc--EEEEEE-
Confidence 111124456889999999999988885 799999999953 477888888866 999999
Q ss_pred cCCCc-EEEEeccCCeEEEEeccC----CeeEEEeecCccceEEEEEcC-CCCeEEEEeCCCcEEEecCCCCC-CCCCCC
Q 021160 161 GPNDE-YVMSGSDCGHLFIWKKKG----GKLVRLMVGDRHVVNQLEPHP-HIPMFATCGIEKTVKLWAPMPTD-FPPLPD 233 (316)
Q Consensus 161 ~~~~~-~l~~~~~dg~v~~wd~~~----~~~~~~~~~~~~~v~~~~~~p-~~~~l~s~~~d~~i~iwd~~~~~-~~~~~~ 233 (316)
+|++. ++++++.|+.|++||+++ ++++..+ +|...|.+++|+| ++++|++++.|+.|++||+++.. ...+..
T Consensus 213 ~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 291 (383)
T 3ei3_B 213 NPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIII 291 (383)
T ss_dssp CSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEE
T ss_pred CCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccccc
Confidence 89998 999999999999999997 6666666 6999999999999 99999999999999999998765 333332
Q ss_pred Cc-------ccce---------eeeecCCCCceeEEecCCCeEEEEEecccCcce-----------eE-Eeecccccccc
Q 021160 234 NA-------EKIM---------KANKQGREDHSRITLTPDVIMHVLRLQRRQTLA-----------YR-ERRYNAADFES 285 (316)
Q Consensus 234 ~~-------~~~~---------~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~~~~-----------~~-~~~~~~~~~~~ 285 (316)
|. ..+. ....+++++.+ +++.|+.+++||+.+++... .. .+.|++..+++
T Consensus 292 ~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s 369 (383)
T 3ei3_B 292 HPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLAS 369 (383)
T ss_dssp CCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEE
T ss_pred ccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEE
Confidence 22 1111 11224455555 77789999999987653321 12 57778888887
Q ss_pred cCCCCeEEEEeccC
Q 021160 286 DEEEGETYLLGFSD 299 (316)
Q Consensus 286 ~~~~~~v~~~~~~~ 299 (316)
+. ++.|.+|++.+
T Consensus 370 ~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 370 GM-GFNILIWNRED 382 (383)
T ss_dssp EE-TTEEEEEECC-
T ss_pred ec-CCcEEEEecCC
Confidence 75 78899998764
No 45
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=2.6e-32 Score=230.31 Aligned_cols=227 Identities=9% Similarity=0.056 Sum_probs=177.4
Q ss_pred ceeeEEEEeeCCCcce-EEEeccccccccCCCCccceEEEEECCCCCcEEEE--EecCCcEEEEeCcCCcccCCCCCCCC
Q 021160 2 VLFNMLFDLRSDSATR-LFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAV--GGSDEYARVYDIRKCHWYSPISSDTP 78 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~-~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~--g~~dg~v~~wd~~~~~~~~~~~~~~~ 78 (316)
++.+++|++....... ....... .....+...+.+++|+|+| +++++ ++.|++|++||+++++
T Consensus 103 d~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~v~fSpDg-~~la~as~~~d~~i~iwd~~~~~---------- 168 (365)
T 4h5i_A 103 NKHLRKFKYDKVNDQLEFLTSVDF---DASTNADDYTKLVYISREG-TVAAIASSKVPAIMRIIDPSDLT---------- 168 (365)
T ss_dssp CCCEEEEEEETTTTEEEEEEEECS---SCCCCTTCCEEEEEECTTS-SCEEEEESCSSCEEEEEETTTTE----------
T ss_pred CCcEEEEEecCCCceEEEeeeece---eecCCcccCEEEEEEcCCC-CEEEEEECCCCCEEEEeECCCCc----------
Confidence 4679999998765322 2221111 1112345678999999999 67654 4578999999999886
Q ss_pred ceecccccccCCCcccEEEEEEccCCCeEEEecCCcEEEEEcCCCCCCCCccCCccccccCCCcc--eeeCCcCCceeee
Q 021160 79 VDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQ--VYSGHRNSQTVKG 156 (316)
Q Consensus 79 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~ 156 (316)
+...+ .|...|.+++|+|+|++++++.++.+.+|+..++ .... ...+|.. .+.+
T Consensus 169 ----~~~~~--~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~----------------~~~~~~~~~~~~~--~v~~ 224 (365)
T 4h5i_A 169 ----EKFEI--ETRGEVKDLHFSTDGKVVAYITGSSLEVISTVTG----------------SCIARKTDFDKNW--SLSK 224 (365)
T ss_dssp ----EEEEE--ECSSCCCEEEECTTSSEEEEECSSCEEEEETTTC----------------CEEEEECCCCTTE--EEEE
T ss_pred ----EEEEe--CCCCceEEEEEccCCceEEeccceeEEEEEeccC----------------cceeeeecCCCCC--CEEE
Confidence 22222 3667899999999999999988888888888776 3322 2334553 4999
Q ss_pred EEEecCCCcEEEEeccCC----eEEEEeccCCee----EEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC-
Q 021160 157 VNFFGPNDEYVMSGSDCG----HLFIWKKKGGKL----VRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD- 227 (316)
Q Consensus 157 ~~~~~~~~~~l~~~~~dg----~v~~wd~~~~~~----~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~- 227 (316)
++| +|++.++++++.++ .+++|++..... ...+.+|...|++++|+|++++||+|+.|++|+|||+++++
T Consensus 225 v~f-spdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~ 303 (365)
T 4h5i_A 225 INF-IADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSM 303 (365)
T ss_dssp EEE-EETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEE
T ss_pred EEE-cCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcE
Confidence 999 99999999999887 688999887654 34567899999999999999999999999999999999887
Q ss_pred CCC-CCCCcccceeeeecCCCCceeEEecCCCeEEEEEeccc
Q 021160 228 FPP-LPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR 268 (316)
Q Consensus 228 ~~~-~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~ 268 (316)
+.+ +.+|...|..++ |+++++++++++.|++|++|++...
T Consensus 304 ~~~~~~gH~~~V~~v~-fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 304 SKIFKQAHSFAITEVT-ISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEEETTSSSSCEEEEE-ECTTSCEEEEEETTSEEEEEECCTT
T ss_pred EEEecCcccCCEEEEE-ECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 444 578999887777 8999999999999999999999754
No 46
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-32 Score=233.75 Aligned_cols=269 Identities=12% Similarity=0.127 Sum_probs=207.3
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
+|.|+|||+.+....+.+. ..+|...|++++|+|++ .+|++|+.||.|++||+.+.... .
T Consensus 44 d~~v~iw~~~~~~~~~~~~---------~~~~~~~v~~~~~s~~~-~~l~~~~~dg~v~vw~~~~~~~~-----~----- 103 (416)
T 2pm9_A 44 DSSLELWSLLAADSEKPIA---------SLQVDSKFNDLDWSHNN-KIIAGALDNGSLELYSTNEANNA-----I----- 103 (416)
T ss_dssp CCCCEEEESSSGGGCSCSC---------CCCCSSCEEEEEECSSS-SCEEEEESSSCEEEECCSSTTSC-----C-----
T ss_pred CCeEEEEEccCCCCCcEEE---------EEecCCceEEEEECCCC-CeEEEEccCCeEEEeeccccccc-----c-----
Confidence 5689999998765321111 11378899999999998 89999999999999999872100 0
Q ss_pred cccccccCCCcccEEEEEEccC-CCeEEEe-cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEE
Q 021160 82 FCPRHLIGKNNIHITGLAYSNT-SELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNF 159 (316)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~~~~-~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 159 (316)
.......+|...|.+++|+|+ +++|+++ .|+.|++||+.+....... . .......+..|... +.+++|
T Consensus 104 -~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~------~-~~~~~~~~~~~~~~--v~~~~~ 173 (416)
T 2pm9_A 104 -NSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSN------Y-TPLTPGQSMSSVDE--VISLAW 173 (416)
T ss_dssp -CEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTT------C-CCBCCCCSCCSSCC--CCEEEE
T ss_pred -cchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccc------c-cccccccccCCCCC--eeEEEe
Confidence 112222678999999999998 7788875 7999999999876200000 0 00011223556655 999999
Q ss_pred ecCC-CcEEEEeccCCeEEEEeccCCeeEEEeecC------ccceEEEEEcCCC-CeEEEEeCCC---cEEEecCCCCC-
Q 021160 160 FGPN-DEYVMSGSDCGHLFIWKKKGGKLVRLMVGD------RHVVNQLEPHPHI-PMFATCGIEK---TVKLWAPMPTD- 227 (316)
Q Consensus 160 ~~~~-~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~------~~~v~~~~~~p~~-~~l~s~~~d~---~i~iwd~~~~~- 227 (316)
+|+ +.++++++.|+.|++||+++++.+..+..| ...|.+++|+|++ .++++++.|+ .|++||++...
T Consensus 174 -~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~ 252 (416)
T 2pm9_A 174 -NQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANT 252 (416)
T ss_dssp -CSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTS
T ss_pred -CCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCC
Confidence 888 789999999999999999999999888776 7889999999997 5799999998 99999999853
Q ss_pred -CCCCC-CCcccceeeeecCC-CCceeEEecCCCeEEEEEecccCccee----------EEeeccc-ccccccCCCCeEE
Q 021160 228 -FPPLP-DNAEKIMKANKQGR-EDHSRITLTPDVIMHVLRLQRRQTLAY----------RERRYNA-ADFESDEEEGETY 293 (316)
Q Consensus 228 -~~~~~-~~~~~~~~~~~~~~-~~~~~~s~~~d~~~~~w~~~~~~~~~~----------~~~~~~~-~~~~~~~~~~~v~ 293 (316)
...+. +|...+..+. +++ ++.++++++.|+.+++|++.+++.... ..+.|+. ..+.+...++.|.
T Consensus 253 ~~~~~~~~~~~~v~~~~-~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~ 331 (416)
T 2pm9_A 253 PLQTLNQGHQKGILSLD-WCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIE 331 (416)
T ss_dssp CSBCCCSCCSSCEEEEE-ECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEE
T ss_pred CcEEeecCccCceeEEE-eCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEE
Confidence 56666 7888887777 565 899999999999999999887543321 2577777 7888899999999
Q ss_pred EEeccCCCC
Q 021160 294 LLGFSDSDA 302 (316)
Q Consensus 294 ~~~~~~~~~ 302 (316)
+|++.....
T Consensus 332 iw~~~~~~~ 340 (416)
T 2pm9_A 332 VQTLQNLTN 340 (416)
T ss_dssp EEESCCCCC
T ss_pred EEEccCCCC
Confidence 999987664
No 47
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.2e-32 Score=233.82 Aligned_cols=274 Identities=12% Similarity=0.163 Sum_probs=204.0
Q ss_pred ceeeEEEEe----eCCCc------ceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccC
Q 021160 2 VLFNMLFDL----RSDSA------TRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYS 71 (316)
Q Consensus 2 ~g~v~vwd~----~~~~~------~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~ 71 (316)
+|.|++||+ .+.+. ...+. +.........+|...|++++|+|++ .+|++|+.||.|++||. +++
T Consensus 67 dg~i~iw~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~i~~~-~~~--- 140 (425)
T 1r5m_A 67 NSVARLARIVETDQEGKKYWKLTIIAELR-HPFALSASSGKTTNQVTCLAWSHDG-NSIVTGVENGELRLWNK-TGA--- 140 (425)
T ss_dssp BTEEEEEEEEEC------CEEEEEEEEEE-CCCCCC------CBCEEEEEECTTS-SEEEEEETTSCEEEEET-TSC---
T ss_pred CceEEEEEEecccCCcccccccccccccc-ccccccccccCCCCceEEEEEcCCC-CEEEEEeCCCeEEEEeC-CCC---
Confidence 689999999 76652 22221 1111111112468899999999998 89999999999999993 333
Q ss_pred CCCCCCCceecccccccCCCcccEEEEEEccCCCeEEE-ecCCcEEEEEcCCCCCCC-----------------------
Q 021160 72 PISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLIS-YNDELVYLFEKNMGLGPS----------------------- 127 (316)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s-~~d~~i~iwd~~~~~~~~----------------------- 127 (316)
....+ ..|...|.+++|+|++++|++ +.|+.|++||+.++....
T Consensus 141 -----------~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (425)
T 1r5m_A 141 -----------LLNVL-NFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSL 208 (425)
T ss_dssp -----------EEEEE-CCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCC
T ss_pred -----------eeeec-cCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcce
Confidence 22222 678999999999999997777 579999999997653100
Q ss_pred -----------------CccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCeeEEEe
Q 021160 128 -----------------PLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLM 190 (316)
Q Consensus 128 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~ 190 (316)
...+..+++........+..|... +.+++| +|++.+|++++.|+.|++||+.+++.+..+
T Consensus 209 ~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~--i~~~~~-~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 285 (425)
T 1r5m_A 209 GVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGP--ISVLEF-NDTNKLLLSASDDGTLRIWHGGNGNSQNCF 285 (425)
T ss_dssp BSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSC--EEEEEE-ETTTTEEEEEETTSCEEEECSSSBSCSEEE
T ss_pred eeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCc--eEEEEE-CCCCCEEEEEcCCCEEEEEECCCCccceEe
Confidence 012223334455566677777766 999999 899999999999999999999999999999
Q ss_pred ecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC-CCCCCCCcccceeeeecCCCCceeEEecCCCeEEEEEecccC
Q 021160 191 VGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD-FPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQ 269 (316)
Q Consensus 191 ~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~ 269 (316)
..|...|.+++|+|++ .+++++.|+.|++||++.++ +..+..|...+..+. +++++.++++++.|+.+++|++.+..
T Consensus 286 ~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~-~s~~~~~l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 286 YGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGR-ISQDGQKYAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp CCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEE-ECTTSSEEEEEETTSCEEEEECHHHH
T ss_pred cCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEE-EcCCCCEEEEEECCCeEEEEECCCCc
Confidence 9999999999999999 99999999999999998876 555556666665555 78899999999999999999998664
Q ss_pred --------------------c-----------cee-EEeecccccccccCCCCeEEEEecc
Q 021160 270 --------------------T-----------LAY-RERRYNAADFESDEEEGETYLLGFS 298 (316)
Q Consensus 270 --------------------~-----------~~~-~~~~~~~~~~~~~~~~~~v~~~~~~ 298 (316)
. .+. ..+.|++..+++...+|.|++|++.
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 364 SKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp C--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred cceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 1 111 1456666677777777777777764
No 48
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.7e-33 Score=244.13 Aligned_cols=234 Identities=10% Similarity=0.056 Sum_probs=182.3
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCC-----CcEEEEEecCCcEEEEeCcCCcccCC--CC
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRN-----PNYFAVGGSDEYARVYDIRKCHWYSP--IS 74 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~-----~~~l~~g~~dg~v~~wd~~~~~~~~~--~~ 74 (316)
+|.|+|||+.+.+....... .. .+|.+.|.+++|+|++ ..+||+++.||+|++||+.+++.... ..
T Consensus 182 D~tI~iWd~~~~~~~~~~~~-~l------~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~ 254 (524)
T 2j04_B 182 SSCIQIFKMNTSTLHCVKVQ-TI------VHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKM 254 (524)
T ss_dssp CEEEEEEEEETTTCCEEEEE-EE------EECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEEC
T ss_pred CceEEEEEccCCCCCceEEE-EE------EecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcccccccee
Confidence 68999999987664321110 00 1257789999999961 26999999999999999987642100 00
Q ss_pred CCCCceecccccccCCCcccEEEEEEccCCCeEEE-ecCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCce
Q 021160 75 SDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLIS-YNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQT 153 (316)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (316)
...+. ....+|...|++++|++++ .|++ +.||+|++||++++. .+...+.+|...
T Consensus 255 ~~~p~------~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~---------------~~~~~~~~H~~~-- 310 (524)
T 2j04_B 255 CEKPS------LTLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPE---------------VPSFYDQVHDSY-- 310 (524)
T ss_dssp CCSCS------EEECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCS---------------SCSEEEECSSSC--
T ss_pred ecCce------EEEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCC---------------CceEEeeccccc--
Confidence 00111 1226788999999999875 5666 579999999998651 244568889876
Q ss_pred eeeE--EEecCCC-cEEEEeccCCeEEEEeccCCeeEEEeecCcc--ceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC-
Q 021160 154 VKGV--NFFGPND-EYVMSGSDCGHLFIWKKKGGKLVRLMVGDRH--VVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD- 227 (316)
Q Consensus 154 i~~~--~~~~~~~-~~l~~~~~dg~v~~wd~~~~~~~~~~~~~~~--~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~- 227 (316)
|.++ +| ++++ .+|++|+.|++|++||+++++++..+.+|.. .|.+++|+|+++.+++++.|++|++||++...
T Consensus 311 V~sv~~~~-s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~ 389 (524)
T 2j04_B 311 ILSVSTAY-SDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFA 389 (524)
T ss_dssp EEEEEEEC-CTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTC
T ss_pred EEEEEEEc-CCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECccccc
Confidence 9999 45 8887 8999999999999999998887777777653 57899999999999999999999999999876
Q ss_pred CCCCCCCcccceeeeecCCCCceeEEecCCCeEEEEEeccc
Q 021160 228 FPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR 268 (316)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~ 268 (316)
...+.+|...+..++ +++++..+++++.|+++++|++..+
T Consensus 390 ~~~l~gH~~~V~sva-~Sp~g~~l~Sgs~Dgtv~lwd~~~~ 429 (524)
T 2j04_B 390 VHPLVSRETTITAIG-VSRLHPMVLAGSADGSLIITNAARR 429 (524)
T ss_dssp CEEEEECSSCEEEEE-CCSSCCBCEEEETTTEEECCBSCSS
T ss_pred ceeeecCCCceEEEE-eCCCCCeEEEEECCCEEEEEechHh
Confidence 566778988888777 7899999999999999999997654
No 49
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=3.5e-33 Score=235.31 Aligned_cols=254 Identities=14% Similarity=0.136 Sum_probs=199.3
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCC---cEEEEEecCCcEEEEeCcCCcccCCCCCCCC
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNP---NYFAVGGSDEYARVYDIRKCHWYSPISSDTP 78 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~---~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~ 78 (316)
+|.|++||+.+.+....+...... .|...|++++|+|++. .+|++|+.||.|++||+.+++
T Consensus 43 ~~~v~vw~~~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~---------- 106 (366)
T 3k26_A 43 SNRVTLYECHSQGEIRLLQSYVDA------DADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQ---------- 106 (366)
T ss_dssp TTEEEEEEECGGGCEEEEEEEECS------CTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCC----------
T ss_pred CCEEEEEEcCCCcEEEeeeecccc------CCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhce----------
Confidence 468999999977765555543322 2678899999999831 699999999999999999876
Q ss_pred ceecccccccCCCcccEEEEEEcc-CCCeEEEe-cCCcEEEEEcCCCCCCCCccCCccccccCCCccee---eCCcCCce
Q 021160 79 VDTFCPRHLIGKNNIHITGLAYSN-TSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVY---SGHRNSQT 153 (316)
Q Consensus 79 ~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 153 (316)
....+ .+|...|.+++|+| ++++|+++ .|+.|++||++++ +....+ .+|...
T Consensus 107 ----~~~~~-~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~----------------~~~~~~~~~~~~~~~-- 163 (366)
T 3k26_A 107 ----CIKHY-VGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTD----------------TLVAIFGGVEGHRDE-- 163 (366)
T ss_dssp ----EEEEE-ESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTT----------------EEEEEECSTTSCSSC--
T ss_pred ----Eeeee-cCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecC----------------eEEEEecccccccCc--
Confidence 22233 67899999999999 88888885 7999999999887 556666 567755
Q ss_pred eeeEEEecCCCcEEEEeccCCeEEEEeccCCeeEEEee----------------------------cCccceEEEEEcCC
Q 021160 154 VKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMV----------------------------GDRHVVNQLEPHPH 205 (316)
Q Consensus 154 i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~----------------------------~~~~~v~~~~~~p~ 205 (316)
|.+++| +|++.+|++++.||.|++||+++++....+. .|...|.+++|+
T Consensus 164 v~~~~~-~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-- 240 (366)
T 3k26_A 164 VLSADY-DLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL-- 240 (366)
T ss_dssp EEEEEE-CTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--
T ss_pred eeEEEE-CCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--
Confidence 999999 9999999999999999999998776543333 388999999998
Q ss_pred CCeEEEEeCCCcEEEecCCCCCC---------------CCCCCCcccceeeeecCCC--CceeEEecCCCeEEEEEeccc
Q 021160 206 IPMFATCGIEKTVKLWAPMPTDF---------------PPLPDNAEKIMKANKQGRE--DHSRITLTPDVIMHVLRLQRR 268 (316)
Q Consensus 206 ~~~l~s~~~d~~i~iwd~~~~~~---------------~~~~~~~~~~~~~~~~~~~--~~~~~s~~~d~~~~~w~~~~~ 268 (316)
+++|++++.|+.|++||+..... ..+..|...+..+. ++++ +.++++++.|+.|++|++..+
T Consensus 241 ~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~s~~~~~~~l~~~~~dg~i~vwd~~~~ 319 (366)
T 3k26_A 241 GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMR-FSMDFWQKMLALGNQVGKLYVWDLEVE 319 (366)
T ss_dssp TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCC-CEECTTSSEEEEECTTSCEEEEECCSS
T ss_pred CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEE-EcCCCCCcEEEEEecCCcEEEEECCCC
Confidence 67999999999999999876542 12223444444444 6666 899999999999999999865
Q ss_pred Ccc---------------ee-EEeecccccccccCCCCeEEEEecc
Q 021160 269 QTL---------------AY-RERRYNAADFESDEEEGETYLLGFS 298 (316)
Q Consensus 269 ~~~---------------~~-~~~~~~~~~~~~~~~~~~v~~~~~~ 298 (316)
+.. +. ..+.|++..+.+...+|.|++|++.
T Consensus 320 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 320 DPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp SGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred CCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 321 11 2677888888888899999999874
No 50
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=4.3e-32 Score=231.47 Aligned_cols=257 Identities=8% Similarity=0.033 Sum_probs=199.5
Q ss_pred ceeeEEEEeeCCC------cceEEEeccccccccCCCCccceEEEEECCC---CC---cEEEEEecCCcEEEEeCcCCcc
Q 021160 2 VLFNMLFDLRSDS------ATRLFYCSSFSENSKQPMNSIRLNAIVIDPR---NP---NYFAVGGSDEYARVYDIRKCHW 69 (316)
Q Consensus 2 ~g~v~vwd~~~~~------~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~---~~---~~l~~g~~dg~v~~wd~~~~~~ 69 (316)
+|.|++||+.+.+ ....+. +|...|.+++|+|+ +. .+|++++.|+.|++||+.+++.
T Consensus 35 dg~i~iw~~~~~~~~~~~~~~~~~~-----------~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~ 103 (397)
T 1sq9_A 35 DGYLKVWDNKLLDNENPKDKSYSHF-----------VHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDE 103 (397)
T ss_dssp TSEEEEEESBCCTTCCGGGGEEEEE-----------CCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTT
T ss_pred CCEEEEEECCCcccccCCCcceEEe-----------cCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcc
Confidence 6899999999876 222222 37889999999997 23 5899999999999999987752
Q ss_pred cCCCCCCCCceecccccccCCC-----cccEEEEEEc----cCCCe-EEEe-cCCcEEEEEcCC------CCCCCCccCC
Q 021160 70 YSPISSDTPVDTFCPRHLIGKN-----NIHITGLAYS----NTSEL-LISY-NDELVYLFEKNM------GLGPSPLSLS 132 (316)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~-----~~~i~~~~~~----~~~~~-l~s~-~d~~i~iwd~~~------~~~~~~~~~~ 132 (316)
.. . .....+ ..| ...|.+++|+ |++++ |+++ .|+.|++||+.. +
T Consensus 104 ~~--------~-~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~--------- 164 (397)
T 1sq9_A 104 TK--------K-VIFEKL-DLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNS--------- 164 (397)
T ss_dssp TC--------C-EEEEEE-CCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHH---------
T ss_pred cc--------c-ccceee-cccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccccccc---------
Confidence 00 0 002222 555 5899999999 99988 8875 799999999987 4
Q ss_pred ccccccCCCcc-----eeeC-------CcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCeeEEEeec---C---c
Q 021160 133 PEDLQKREEPQ-----VYSG-------HRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVG---D---R 194 (316)
Q Consensus 133 ~~~~~~~~~~~-----~~~~-------~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~---~---~ 194 (316)
..+. .+.+ |... +.+++| +|++ ++++++.|+.|++||+++++.+..+.. | .
T Consensus 165 -------~~~~~~~~~~~~~~~~~~~~~~~~--i~~~~~-~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~ 233 (397)
T 1sq9_A 165 -------LTLNWSPTLELQGTVESPMTPSQF--ATSVDI-SERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNS 233 (397)
T ss_dssp -------TTTCCCCEEEEEEEECCSSSSCCC--CCEEEE-CTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCC
T ss_pred -------ceeeccCcceeeeeeccccCCCCC--ceEEEE-CCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccC
Confidence 3333 5533 5544 999999 8999 999999999999999999999999998 8 9
Q ss_pred cceEEEEEcCCCCeEEEEeCC---CcEEEecCCCCC-CCCCCC-------------CcccceeeeecCCCCceeEEecCC
Q 021160 195 HVVNQLEPHPHIPMFATCGIE---KTVKLWAPMPTD-FPPLPD-------------NAEKIMKANKQGREDHSRITLTPD 257 (316)
Q Consensus 195 ~~v~~~~~~p~~~~l~s~~~d---~~i~iwd~~~~~-~~~~~~-------------~~~~~~~~~~~~~~~~~~~s~~~d 257 (316)
..|.+++|+|++++|++++.| +.|++||++..+ +..+.. |...+..+. +++++.++++++.|
T Consensus 234 ~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~l~~~~~d 312 (397)
T 1sq9_A 234 NSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLS-FNDSGETLCSAGWD 312 (397)
T ss_dssp CCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEE-ECSSSSEEEEEETT
T ss_pred CccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEE-ECCCCCEEEEEeCC
Confidence 999999999999999999999 999999998876 555665 777776666 78889999999999
Q ss_pred CeEEEEEecccCc------------------------------ceeE-Eeeccc----------ccccccCCCCeEEEEe
Q 021160 258 VIMHVLRLQRRQT------------------------------LAYR-ERRYNA----------ADFESDEEEGETYLLG 296 (316)
Q Consensus 258 ~~~~~w~~~~~~~------------------------------~~~~-~~~~~~----------~~~~~~~~~~~v~~~~ 296 (316)
+.+++|++.+.+. .+.. .+.|++ ..+.++..+|.|.+|+
T Consensus 313 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~ 392 (397)
T 1sq9_A 313 GKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFR 392 (397)
T ss_dssp SEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEE
T ss_pred CeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEE
Confidence 9999999865421 1222 566665 5677777888888888
Q ss_pred ccCC
Q 021160 297 FSDS 300 (316)
Q Consensus 297 ~~~~ 300 (316)
+.++
T Consensus 393 ~~~g 396 (397)
T 1sq9_A 393 EAGG 396 (397)
T ss_dssp EEC-
T ss_pred cCCC
Confidence 8664
No 51
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=3.6e-32 Score=229.81 Aligned_cols=220 Identities=12% Similarity=0.083 Sum_probs=181.1
Q ss_pred ceeeEEEEeeCCC--cceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCc
Q 021160 2 VLFNMLFDLRSDS--ATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPV 79 (316)
Q Consensus 2 ~g~v~vwd~~~~~--~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~ 79 (316)
+|.|++||+.+.+ ....+. +|...|.+++|+|++ .+|++++.|+.|++||+.+++..
T Consensus 29 d~~v~i~~~~~~~~~~~~~~~-----------~h~~~v~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~--------- 87 (372)
T 1k8k_C 29 NHEVHIYEKSGNKWVQVHELK-----------EHNGQVTGVDWAPDS-NRIVTCGTDRNAYVWTLKGRTWK--------- 87 (372)
T ss_dssp SSEEEEEEEETTEEEEEEEEE-----------CCSSCEEEEEEETTT-TEEEEEETTSCEEEEEEETTEEE---------
T ss_pred CCEEEEEeCCCCcEEeeeeec-----------CCCCcccEEEEeCCC-CEEEEEcCCCeEEEEECCCCeee---------
Confidence 5899999998875 322332 378899999999998 89999999999999999877521
Q ss_pred eecccccccCCCcccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCCCCCCccCCccccccCCC---ccee-eCCcCCcee
Q 021160 80 DTFCPRHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREE---PQVY-SGHRNSQTV 154 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~i 154 (316)
.......|...|.+++|+|++++|+++ .|+.|++||++.. .. ...+ .+|... |
T Consensus 88 ----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~----------------~~~~~~~~~~~~~~~~--i 145 (372)
T 1k8k_C 88 ----PTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQE----------------NDWWVCKHIKKPIRST--V 145 (372)
T ss_dssp ----EEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETT----------------TTEEEEEEECTTCCSC--E
T ss_pred ----eeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCC----------------CcceeeeeeecccCCC--e
Confidence 111125678899999999999988875 7999999999876 21 2222 455655 9
Q ss_pred eeEEEecCCCcEEEEeccCCeEEEEec------------------cCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCC
Q 021160 155 KGVNFFGPNDEYVMSGSDCGHLFIWKK------------------KGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEK 216 (316)
Q Consensus 155 ~~~~~~~~~~~~l~~~~~dg~v~~wd~------------------~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~ 216 (316)
.+++| +|++.++++++.||.|++||+ ..++.+..+..|...|.+++|+|++++|++++.|+
T Consensus 146 ~~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 224 (372)
T 1k8k_C 146 LSLDW-HPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDS 224 (372)
T ss_dssp EEEEE-CTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTT
T ss_pred eEEEE-cCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCC
Confidence 99999 999999999999999999995 46788889989999999999999999999999999
Q ss_pred cEEEecCCCCC-CCCCCCCcccceeeeecCCCCceeEEecCCCeEEEEEecc
Q 021160 217 TVKLWAPMPTD-FPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQR 267 (316)
Q Consensus 217 ~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~ 267 (316)
.|++||++.++ +..+..|...+..+. +++++.+++++ .|+.+++|++..
T Consensus 225 ~i~i~d~~~~~~~~~~~~~~~~v~~~~-~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 225 TVCLADADKKMAVATLASETLPLLAVT-FITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp EEEEEEGGGTTEEEEEECSSCCEEEEE-EEETTEEEEEE-TTSSCEEEEEET
T ss_pred EEEEEECCCCceeEEEccCCCCeEEEE-EecCCCEEEEE-eCCeEEEEEccC
Confidence 99999998776 556666777776665 67788877777 899999999987
No 52
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5.5e-33 Score=235.50 Aligned_cols=224 Identities=10% Similarity=0.044 Sum_probs=170.9
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
+|.|+|||+.+....... ...+|...|.+++|+|++ ++|++++.|+.|++||+.+++..
T Consensus 32 d~~i~iw~~~~~~~~~~~---------~~~~h~~~v~~~~~s~~~-~~l~s~s~d~~v~vwd~~~~~~~----------- 90 (377)
T 3dwl_C 32 TNQVELYEQDGNGWKHAR---------TFSDHDKIVTCVDWAPKS-NRIVTCSQDRNAYVYEKRPDGTW----------- 90 (377)
T ss_dssp SSCBCEEEEETTEEEECC---------CBCCCSSCEEEEEECTTT-CCEEEEETTSSEEEC------CC-----------
T ss_pred CCEEEEEEccCCceEEEE---------EEecCCceEEEEEEeCCC-CEEEEEeCCCeEEEEEcCCCCce-----------
Confidence 688999999876311111 112589999999999998 89999999999999999876400
Q ss_pred cccccccCCCcccEEEEEEccCCCeEEE-ecCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeC-CcCCceeeeEEE
Q 021160 82 FCPRHLIGKNNIHITGLAYSNTSELLIS-YNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSG-HRNSQTVKGVNF 159 (316)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~~~~~~~l~s-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~ 159 (316)
........|...|.+++|+|++++|++ +.|+.|++||++.+. .......+.+ |... |.+++|
T Consensus 91 -~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-------------~~~~~~~~~~~h~~~--v~~~~~ 154 (377)
T 3dwl_C 91 -KQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQEN-------------DWWVSKHLKRPLRST--ILSLDW 154 (377)
T ss_dssp -CCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC------------------CCCCEEECSSCCSC--EEEEEE
T ss_pred -eeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcc-------------cceeeeEeecccCCC--eEEEEE
Confidence 112222678999999999999987777 579999999998761 0013566666 7765 999999
Q ss_pred ecCCCcEEEEeccCCeEEEEecc------------------CCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEe
Q 021160 160 FGPNDEYVMSGSDCGHLFIWKKK------------------GGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLW 221 (316)
Q Consensus 160 ~~~~~~~l~~~~~dg~v~~wd~~------------------~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iw 221 (316)
+|++++|++++.|+.|++||+. .++++..+ +|...|.+++|+|++++|++++.|+.|++|
T Consensus 155 -~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iw 232 (377)
T 3dwl_C 155 -HPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIA 232 (377)
T ss_dssp -CTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-C
T ss_pred -cCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEE
Confidence 9999999999999999999985 35566666 899999999999999999999999999999
Q ss_pred cCCCCC-----CCCCCCCcccceeeeecCCCCceeEEecCCCeEEEEEec
Q 021160 222 APMPTD-----FPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQ 266 (316)
Q Consensus 222 d~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~ 266 (316)
|+.++. +..+..|...+..+. +++++.++++++.++.+ +|+..
T Consensus 233 d~~~~~~~~~~~~~~~~~~~~v~~~~-~s~~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 233 YPSAPEQPPRALITVKLSQLPLRSLL-WANESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp EECSTTSCEEECCCEECSSSCEEEEE-EEETTEEEEEESSSSEE-EECCC
T ss_pred ECCCCCCcceeeEeecCCCCceEEEE-EcCCCCEEEEEcCCcEE-EEEeC
Confidence 998876 466777888776666 78889999999877776 56554
No 53
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.8e-32 Score=245.03 Aligned_cols=212 Identities=19% Similarity=0.326 Sum_probs=181.8
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
+|.|++||.. .+....+. +|...|.+++|+|++ ++|++++.|+.|++||.. ++
T Consensus 365 dg~v~~~~~~-~~~~~~~~-----------~~~~~v~~~~~s~dg-~~l~~~~~d~~v~~~~~~-~~------------- 417 (577)
T 2ymu_A 365 DKTVKLWNRN-GQLLQTLT-----------GHSSSVRGVAFSPDG-QTIASASDDKTVKLWNRN-GQ------------- 417 (577)
T ss_dssp TSEEEEEETT-CCEEEEEE-----------CCSSCEEEEEECTTS-SCEEEEETTSEEEEECTT-CC-------------
T ss_pred CCEEEEEcCC-CCEEEEec-----------CCCCCeEEEEECCCC-CEEEEEeCCCEEEEEeCC-CC-------------
Confidence 5789999953 33322222 378899999999999 899999999999999964 33
Q ss_pred cccccccCCCcccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEe
Q 021160 82 FCPRHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFF 160 (316)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 160 (316)
....+ .+|...|.+++|+|++++|+++ .|+.|++||... +.+..+.+|... |.+++|
T Consensus 418 -~~~~~-~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~-----------------~~~~~~~~~~~~--v~~~~~- 475 (577)
T 2ymu_A 418 -LLQTL-TGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNG-----------------QLLQTLTGHSSS--VRGVAF- 475 (577)
T ss_dssp -EEEEE-ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTS-----------------CEEEEEECCSSC--EEEEEE-
T ss_pred -EEEEe-cCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCC-----------------CEEEEEcCCCCC--EEEEEE-
Confidence 12222 6789999999999999988884 799999999754 467788889876 999999
Q ss_pred cCCCcEEEEeccCCeEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCCCCCCCCCccccee
Q 021160 161 GPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMK 240 (316)
Q Consensus 161 ~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 240 (316)
+|++++|++++.|+.|++||. +++++..+.+|...|++++|+|++++|++++.|+.|++||.....+..+.+|...+..
T Consensus 476 spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~~~~~~~~~h~~~v~~ 554 (577)
T 2ymu_A 476 SPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWG 554 (577)
T ss_dssp CTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEE
T ss_pred cCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCCCEEEEEcCCCCCEEE
Confidence 999999999999999999995 6888999999999999999999999999999999999999766557778889998877
Q ss_pred eeecCCCCceeEEecCCCeEEEEE
Q 021160 241 ANKQGREDHSRITLTPDVIMHVLR 264 (316)
Q Consensus 241 ~~~~~~~~~~~~s~~~d~~~~~w~ 264 (316)
+. ++++++++++++.|+.|++||
T Consensus 555 ~~-fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 555 VA-FSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp EE-ECTTSSCEEEEETTSCEEEEC
T ss_pred EE-EcCCCCEEEEEeCCCEEEEeC
Confidence 76 889999999999999999996
No 54
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.6e-33 Score=239.48 Aligned_cols=263 Identities=13% Similarity=0.207 Sum_probs=205.5
Q ss_pred ceeeEEEEeeCCCc--ceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCc
Q 021160 2 VLFNMLFDLRSDSA--TRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPV 79 (316)
Q Consensus 2 ~g~v~vwd~~~~~~--~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~ 79 (316)
+|.|++||+.+... ...... .+|...|++++|+|++..+|++++.|+.|++||+.+++.... ..
T Consensus 88 dg~v~vw~~~~~~~~~~~~~~~---------~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~-----~~ 153 (416)
T 2pm9_A 88 NGSLELYSTNEANNAINSMARF---------SNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPS-----NY 153 (416)
T ss_dssp SSCEEEECCSSTTSCCCEEEEC---------CCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTT-----TC
T ss_pred CCeEEEeecccccccccchhhc---------cCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccc-----cc
Confidence 58899999987321 112221 248899999999998448999999999999999987751100 00
Q ss_pred eecccccccCCCcccEEEEEEccC-CCeEEEe-cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCC------cCC
Q 021160 80 DTFCPRHLIGKNNIHITGLAYSNT-SELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGH------RNS 151 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 151 (316)
..+.. .....|...|.+++|+|+ +.+++++ .|+.|++||++++ +....+..+ ...
T Consensus 154 ~~~~~-~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~----------------~~~~~~~~~~~~~~~~~~ 216 (416)
T 2pm9_A 154 TPLTP-GQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAK----------------KEVIHLSYTSPNSGIKQQ 216 (416)
T ss_dssp CCBCC-CCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTT----------------EEEEEECCCCCSSCCCCC
T ss_pred ccccc-ccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCC----------------CcceEEeccccccccCCc
Confidence 00111 122578899999999999 5677775 7999999999887 556666655 444
Q ss_pred ceeeeEEEecCCC-cEEEEeccCC---eEEEEeccCC-eeEEEee-cCccceEEEEEcC-CCCeEEEEeCCCcEEEecCC
Q 021160 152 QTVKGVNFFGPND-EYVMSGSDCG---HLFIWKKKGG-KLVRLMV-GDRHVVNQLEPHP-HIPMFATCGIEKTVKLWAPM 224 (316)
Q Consensus 152 ~~i~~~~~~~~~~-~~l~~~~~dg---~v~~wd~~~~-~~~~~~~-~~~~~v~~~~~~p-~~~~l~s~~~d~~i~iwd~~ 224 (316)
+.+++| +|++ .++++++.++ .|++||++++ +++..+. +|...|.+++|+| ++++|++++.|+.|++||++
T Consensus 217 --v~~~~~-~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~ 293 (416)
T 2pm9_A 217 --LSVVEW-HPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPE 293 (416)
T ss_dssp --EEEEEE-CSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSS
T ss_pred --eEEEEE-CCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCC
Confidence 999999 8886 6899999998 9999999986 6677787 8999999999999 89999999999999999999
Q ss_pred CCC-CCCCCCCcccceeeeecCCCC-ceeEEecCCCeEEEEEecccCcc-------------------------------
Q 021160 225 PTD-FPPLPDNAEKIMKANKQGRED-HSRITLTPDVIMHVLRLQRRQTL------------------------------- 271 (316)
Q Consensus 225 ~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~d~~~~~w~~~~~~~~------------------------------- 271 (316)
+++ +..+..|...+..+. +++++ .++++++.|+.+++|++......
T Consensus 294 ~~~~~~~~~~~~~~v~~~~-~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (416)
T 2pm9_A 294 SAEQLSQFPARGNWCFKTK-FAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPS 372 (416)
T ss_dssp SCCEEEEEECSSSCCCCEE-ECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCC
T ss_pred CCccceeecCCCCceEEEE-ECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccc
Confidence 877 666777888877666 67766 89999999999999998764321
Q ss_pred -------------e-eEEeecccccccccCCCCeEEEEeccC
Q 021160 272 -------------A-YRERRYNAADFESDEEEGETYLLGFSD 299 (316)
Q Consensus 272 -------------~-~~~~~~~~~~~~~~~~~~~v~~~~~~~ 299 (316)
+ -..++|++..++.+..++.|.+|++..
T Consensus 373 ~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~ 414 (416)
T 2pm9_A 373 VFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPKI 414 (416)
T ss_dssp SSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCCCC
T ss_pred cccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEecc
Confidence 1 125778888888888888898888764
No 55
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=6.7e-32 Score=235.13 Aligned_cols=264 Identities=13% Similarity=0.128 Sum_probs=204.7
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
+|.|++||+.+.+....+. +|.+.|.+++|+|++ ++++|+.||.|++||+++++
T Consensus 141 dg~i~vwd~~~~~~~~~~~-----------~h~~~V~~l~~~~~~--~l~s~s~dg~i~vwd~~~~~------------- 194 (464)
T 3v7d_B 141 DKMIRVYDSINKKFLLQLS-----------GHDGGVWALKYAHGG--ILVSGSTDRTVRVWDIKKGC------------- 194 (464)
T ss_dssp TSCEEEEETTTTEEEEEEC-----------CCSSCEEEEEECSTT--EEEEEETTSCEEEEETTTTE-------------
T ss_pred CCcEEEEECCCCcEEEEEe-----------CCCcCEEEEEEcCCC--EEEEEeCCCCEEEEECCCCc-------------
Confidence 6899999998876544432 489999999999976 89999999999999999886
Q ss_pred cccccccCCCcccEEEEEEcc--CCCeEEE-ecCCcEEEEEcCCCCCCCCccCCc-------cccccCCCcceeeCCcCC
Q 021160 82 FCPRHLIGKNNIHITGLAYSN--TSELLIS-YNDELVYLFEKNMGLGPSPLSLSP-------EDLQKREEPQVYSGHRNS 151 (316)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~~~--~~~~l~s-~~d~~i~iwd~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~ 151 (316)
+...+ .+|...|.+++|++ ++.++++ +.|+.|++||+.+........... ...........+.+|...
T Consensus 195 -~~~~~-~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (464)
T 3v7d_B 195 -CTHVF-EGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMAS 272 (464)
T ss_dssp -EEEEE-CCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSC
T ss_pred -EEEEE-CCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccce
Confidence 33333 67999999999995 5667777 479999999998763111100000 000000123456667654
Q ss_pred ceeeeEEEecCCCcEEEEeccCCeEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC-CCC
Q 021160 152 QTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD-FPP 230 (316)
Q Consensus 152 ~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~-~~~ 230 (316)
+.++ ++++.++++++.|+.|++||+.+++++..+.+|...|.+++|+|+++++++++.|+.|++||+++++ +..
T Consensus 273 --v~~~---~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~ 347 (464)
T 3v7d_B 273 --VRTV---SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYT 347 (464)
T ss_dssp --EEEE---EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEE
T ss_pred --EEEE---cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEE
Confidence 7766 4578999999999999999999999999999999999999999999999999999999999998877 667
Q ss_pred CCCCcccceeeeecCCCCceeEEecCCCeEEEEEecccCccee---------EEeecccccccccCCCCeEEEEeccCCC
Q 021160 231 LPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTLAY---------RERRYNAADFESDEEEGETYLLGFSDSD 301 (316)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 301 (316)
+.+|...+..+.+ . +.++++++.|+.+++|++.+...... ..+.+++..+.++. +|.+.+|++..++
T Consensus 348 ~~~h~~~v~~~~~-~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~ 423 (464)
T 3v7d_B 348 LQGHTALVGLLRL-S--DKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGK 423 (464)
T ss_dssp ECCCSSCEEEEEE-C--SSEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCC
T ss_pred EeCCCCcEEEEEE-c--CCEEEEEeCCCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCc
Confidence 7788888766653 3 57999999999999999987533221 25667777777766 7899999998876
Q ss_pred C
Q 021160 302 A 302 (316)
Q Consensus 302 ~ 302 (316)
.
T Consensus 424 ~ 424 (464)
T 3v7d_B 424 L 424 (464)
T ss_dssp E
T ss_pred E
Confidence 4
No 56
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.5e-31 Score=223.17 Aligned_cols=258 Identities=14% Similarity=0.141 Sum_probs=199.0
Q ss_pred CceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCce
Q 021160 1 MVLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVD 80 (316)
Q Consensus 1 ~~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~ 80 (316)
.+|.|+|||+.+.+.......... .+|...|.+++|+|++ .+|++|+.|+.|++|+......
T Consensus 59 ~D~~i~vWd~~~~~~~~~~~~~~l------~~h~~~V~~~~~s~dg-~~l~s~~~d~~i~~~~~~~~~~----------- 120 (340)
T 4aow_A 59 RDKTIIMWKLTRDETNYGIPQRAL------RGHSHFVSDVVISSDG-QFALSGSWDGTLRLWDLTTGTT----------- 120 (340)
T ss_dssp TTSCEEEEEECCSSSCSEEEEEEE------CCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEE-----------
T ss_pred CCCeEEEEECCCCCcccceeeEEE------eCCCCCEEEEEECCCC-CEEEEEcccccceEEeecccce-----------
Confidence 378999999987664333322222 2589999999999999 8999999999999999987652
Q ss_pred ecccccccCCCcccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEE
Q 021160 81 TFCPRHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNF 159 (316)
Q Consensus 81 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 159 (316)
.... ..+...+..+.+++++.+++++ .|+.+++||+.... .......+|... +..++|
T Consensus 121 ---~~~~-~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~---------------~~~~~~~~~~~~--v~~~~~ 179 (340)
T 4aow_A 121 ---TRRF-VGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC---------------KYTVQDESHSEW--VSCVRF 179 (340)
T ss_dssp ---EEEE-ECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCE---------------EEEECSSSCSSC--EEEEEE
T ss_pred ---eeee-cCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCc---------------eEEEEeccccCc--ccceEE
Confidence 1111 4556778889999999988874 79999999987651 222334566655 888988
Q ss_pred ecCC--CcEEEEeccCCeEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC-CCCCCCCcc
Q 021160 160 FGPN--DEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD-FPPLPDNAE 236 (316)
Q Consensus 160 ~~~~--~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~~ 236 (316)
+++ ..++++++.|+.|++||+++++++..+.+|...|++++|+|++++|++++.|+.|++||++..+ +..+. +..
T Consensus 180 -~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~-~~~ 257 (340)
T 4aow_A 180 -SPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD-GGD 257 (340)
T ss_dssp -CSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEE-CSS
T ss_pred -ccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeec-CCc
Confidence 655 4578899999999999999999999999999999999999999999999999999999999876 33333 334
Q ss_pred cceeeeecCCCCceeEEecCCCeEEEEEecccCc------------------cee-EEeecccccccccCCCCeEEEEec
Q 021160 237 KIMKANKQGREDHSRITLTPDVIMHVLRLQRRQT------------------LAY-RERRYNAADFESDEEEGETYLLGF 297 (316)
Q Consensus 237 ~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~~------------------~~~-~~~~~~~~~~~~~~~~~~v~~~~~ 297 (316)
.+.... +++++ .+++++.|+.+++|+++.+.. .+. ..+.|++..++++..+|.|.+|++
T Consensus 258 ~v~~~~-~~~~~-~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~ 335 (340)
T 4aow_A 258 IINALC-FSPNR-YWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQV 335 (340)
T ss_dssp CEEEEE-ECSSS-SEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred eEEeee-cCCCC-ceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeC
Confidence 444443 56654 566777899999999875321 111 267888889999999999999999
Q ss_pred cCCC
Q 021160 298 SDSD 301 (316)
Q Consensus 298 ~~~~ 301 (316)
+.|.
T Consensus 336 ~tGt 339 (340)
T 4aow_A 336 TIGT 339 (340)
T ss_dssp EC--
T ss_pred CCcC
Confidence 8764
No 57
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.3e-31 Score=227.61 Aligned_cols=236 Identities=14% Similarity=0.110 Sum_probs=187.5
Q ss_pred CCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccc-cCCCcccEEEEEEcc-CCCeEE
Q 021160 31 PMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHL-IGKNNIHITGLAYSN-TSELLI 108 (316)
Q Consensus 31 ~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~-~~~~l~ 108 (316)
.+|...|++++|+|+++.+|++|+.||.|++||+.+++. ...+ ..+|...|.+++|+| ++++|+
T Consensus 70 ~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~--------------~~~~~~~~h~~~v~~~~~~~~~~~~l~ 135 (383)
T 3ei3_B 70 SPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNK--------------TSFIQGMGPGDAITGMKFNQFNTNQLF 135 (383)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTC--------------EEEECCCSTTCBEEEEEEETTEEEEEE
T ss_pred cCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCccc--------------ceeeecCCcCCceeEEEeCCCCCCEEE
Confidence 368999999999999867999999999999999997762 2222 146899999999999 567777
Q ss_pred E-ecCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCc-CCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCee
Q 021160 109 S-YNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHR-NSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKL 186 (316)
Q Consensus 109 s-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~ 186 (316)
+ +.|+.|++||+... ....+..+. ....+.+++| +|++.+|++++.|+.|++||+ +++.
T Consensus 136 s~~~d~~i~iwd~~~~-----------------~~~~~~~~~~~~~~v~~~~~-~~~~~~l~~~~~d~~i~i~d~-~~~~ 196 (383)
T 3ei3_B 136 VSSIRGATTLRDFSGS-----------------VIQVFAKTDSWDYWYCCVDV-SVSRQMLATGDSTGRLLLLGL-DGHE 196 (383)
T ss_dssp EEETTTEEEEEETTSC-----------------EEEEEECCCCSSCCEEEEEE-ETTTTEEEEEETTSEEEEEET-TSCE
T ss_pred EEeCCCEEEEEECCCC-----------------ceEEEeccCCCCCCeEEEEE-CCCCCEEEEECCCCCEEEEEC-CCCE
Confidence 7 47999999999864 444554443 1133999999 899999999999999999999 5788
Q ss_pred EEEeecCccceEEEEEcCCCC-eEEEEeCCCcEEEecCCCC----CCCCCCCCcccceeeeecCC-CCceeEEecCCCeE
Q 021160 187 VRLMVGDRHVVNQLEPHPHIP-MFATCGIEKTVKLWAPMPT----DFPPLPDNAEKIMKANKQGR-EDHSRITLTPDVIM 260 (316)
Q Consensus 187 ~~~~~~~~~~v~~~~~~p~~~-~l~s~~~d~~i~iwd~~~~----~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~d~~~ 260 (316)
+..+.+|...|.+++|+|+++ +|++++.|+.|++||++.. ......+|...+..+. +++ ++.++++++.|+.+
T Consensus 197 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~-~s~~~~~~l~~~~~d~~i 275 (383)
T 3ei3_B 197 IFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAY-FNPTDSTKLLTTDQRNEI 275 (383)
T ss_dssp EEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEE-ECTTTSCEEEEEESSSEE
T ss_pred EEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEE-EcCCCCCEEEEEcCCCcE
Confidence 889999999999999999999 8999999999999999873 3222225777776666 677 99999999999999
Q ss_pred EEEEecccCcceeE---------------------------EeecccccccccCCCCeEEEEeccCCCC
Q 021160 261 HVLRLQRRQTLAYR---------------------------ERRYNAADFESDEEEGETYLLGFSDSDA 302 (316)
Q Consensus 261 ~~w~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 302 (316)
++||+.+....... .+.|++.. ++..++.|++|+...+..
T Consensus 276 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~ 342 (383)
T 3ei3_B 276 RVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGL 342 (383)
T ss_dssp EEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCE
T ss_pred EEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCce
Confidence 99999875442221 23334433 556888999999877653
No 58
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.1e-31 Score=229.69 Aligned_cols=261 Identities=11% Similarity=0.094 Sum_probs=197.5
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECC-CCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCce
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDP-RNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVD 80 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~-~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~ 80 (316)
+|.|+|||+....... .......+|.+.|++++|+| ++ .+|++|+.||.|++||+.++...... ..+
T Consensus 56 ~g~i~v~~~~~~~~~~-------~~~~~~~~h~~~V~~~~~~p~~~-~~l~s~s~dg~v~vw~~~~~~~~~~~--~~~-- 123 (402)
T 2aq5_A 56 GGAFLVLPLGKTGRVD-------KNVPLVCGHTAPVLDIAWCPHND-NVIASGSEDCTVMVWEIPDGGLVLPL--REP-- 123 (402)
T ss_dssp SCCEEEEETTCCEECC-------TTCCCBCCCSSCEEEEEECTTCT-TEEEEEETTSEEEEEECCTTCCSSCB--CSC--
T ss_pred CCEEEEEECccCCCCC-------CCCceEecCCCCEEEEEeCCCCC-CEEEEEeCCCeEEEEEccCCCCcccc--CCc--
Confidence 5889999986542210 01112346899999999999 66 89999999999999999987522110 011
Q ss_pred ecccccccCCCcccEEEEEEccCC-CeEEE-ecCCcEEEEEcCCCCCCCCccCCccccccCCCccee--eCCcCCceeee
Q 021160 81 TFCPRHLIGKNNIHITGLAYSNTS-ELLIS-YNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVY--SGHRNSQTVKG 156 (316)
Q Consensus 81 ~~~~~~~~~~~~~~i~~~~~~~~~-~~l~s-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~ 156 (316)
... ..+|...|.+++|+|++ .+|++ +.|+.|++||++++ +....+ .+|... |.+
T Consensus 124 ---~~~-~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~----------------~~~~~~~~~~~~~~--v~~ 181 (402)
T 2aq5_A 124 ---VIT-LEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTG----------------AAVLTLGPDVHPDT--IYS 181 (402)
T ss_dssp ---SEE-EECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTT----------------EEEEEECTTTCCSC--EEE
T ss_pred ---eEE-ecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCC----------------CccEEEecCCCCCc--eEE
Confidence 222 26789999999999998 57777 47999999999987 567777 677766 999
Q ss_pred EEEecCCCcEEEEeccCCeEEEEeccCCeeEEEe-ecCccc-eEEEEEcCCCCeEEEE---eCCCcEEEecCCCCCC-C-
Q 021160 157 VNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLM-VGDRHV-VNQLEPHPHIPMFATC---GIEKTVKLWAPMPTDF-P- 229 (316)
Q Consensus 157 ~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~-~~~~~~-v~~~~~~p~~~~l~s~---~~d~~i~iwd~~~~~~-~- 229 (316)
++| +|++.+|++++.|+.|++||+++++.+..+ ..|.+. +.+++|+|++++|+++ +.|+.|++||++.... .
T Consensus 182 ~~~-~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~ 260 (402)
T 2aq5_A 182 VDW-SRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLS 260 (402)
T ss_dssp EEE-CTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSE
T ss_pred EEE-CCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCce
Confidence 999 899999999999999999999999999888 688765 8999999999999998 7899999999987652 1
Q ss_pred CC-CCCcccceeeeecCCCCceeE-EecCCCeEEEEEecccCc-c-ee-----------EEeecccccccccCCCCeEEE
Q 021160 230 PL-PDNAEKIMKANKQGREDHSRI-TLTPDVIMHVLRLQRRQT-L-AY-----------RERRYNAADFESDEEEGETYL 294 (316)
Q Consensus 230 ~~-~~~~~~~~~~~~~~~~~~~~~-s~~~d~~~~~w~~~~~~~-~-~~-----------~~~~~~~~~~~~~~~~~~v~~ 294 (316)
.. ..+...+.... +++++..++ +++.|+.|++|++.+++. . .. ..+.|+...+.+.++ .+.+
T Consensus 261 ~~~~~~~~~v~~~~-~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s~~~--~~~~ 337 (402)
T 2aq5_A 261 LQELDTSSGVLLPF-FDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVNKCE--IARF 337 (402)
T ss_dssp EEECCCCSSCEEEE-EETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGGGTE--EEEE
T ss_pred EEeccCCCceeEEE-EcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEecccccceecce--eEEE
Confidence 11 13445555555 777777775 677899999999988753 1 11 145666666666544 4777
Q ss_pred EeccCC
Q 021160 295 LGFSDS 300 (316)
Q Consensus 295 ~~~~~~ 300 (316)
|++..+
T Consensus 338 ~~l~~~ 343 (402)
T 2aq5_A 338 YKLHER 343 (402)
T ss_dssp EEEETT
T ss_pred EEcCCC
Confidence 777654
No 59
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.5e-32 Score=228.20 Aligned_cols=234 Identities=14% Similarity=0.165 Sum_probs=193.4
Q ss_pred CCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccC--CCeEEE
Q 021160 32 MNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNT--SELLIS 109 (316)
Q Consensus 32 gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~s 109 (316)
+|...|++++|+|++ .+|++|+.||.|++||+...... .... ..+|...|.+++|+++ +++|++
T Consensus 9 ~h~~~v~~~~~s~~~-~~l~~~~~dg~i~iw~~~~~~~~------------~~~~-~~~h~~~v~~~~~~~~~~~~~l~s 74 (379)
T 3jrp_A 9 AHNELIHDAVLDYYG-KRLATCSSDKTIKIFEVEGETHK------------LIDT-LTGHEGPVWRVDWAHPKFGTILAS 74 (379)
T ss_dssp ECCCCEEEEEECSSS-SEEEEEETTSCEEEEEEETTEEE------------EEEE-ECCCSSCEEEEEECCGGGCSEEEE
T ss_pred CCcccEEEEEEcCCC-CEEEEEECCCcEEEEecCCCcce------------eeeE-ecCCCCcEEEEEeCCCCCCCEEEE
Confidence 589999999999999 89999999999999999844310 2222 2789999999999987 788887
Q ss_pred e-cCCcEEEEEcCCCCCCCCccCCccccccCC--CcceeeCCcCCceeeeEEEecCC--CcEEEEeccCCeEEEEeccCC
Q 021160 110 Y-NDELVYLFEKNMGLGPSPLSLSPEDLQKRE--EPQVYSGHRNSQTVKGVNFFGPN--DEYVMSGSDCGHLFIWKKKGG 184 (316)
Q Consensus 110 ~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~--~~~l~~~~~dg~v~~wd~~~~ 184 (316)
+ .|+.|++||+.++ . ....+..|... |.+++| +|+ +.++++++.|+.|++||+.++
T Consensus 75 ~~~dg~v~iwd~~~~----------------~~~~~~~~~~~~~~--v~~~~~-~~~~~~~~l~~~~~d~~i~v~d~~~~ 135 (379)
T 3jrp_A 75 CSYDGKVLIWKEENG----------------RWSQIAVHAVHSAS--VNSVQW-APHEYGPLLLVASSDGKVSVVEFKEN 135 (379)
T ss_dssp EETTSCEEEEEEETT----------------EEEEEEEECCCSSC--EEEEEE-CCGGGCSEEEEEETTSEEEEEECCTT
T ss_pred eccCCEEEEEEcCCC----------------ceeEeeeecCCCcc--eEEEEe-CCCCCCCEEEEecCCCcEEEEecCCC
Confidence 5 7999999999876 3 55666777766 999999 898 999999999999999999877
Q ss_pred e--eEEEeecCccceEEEEEcC-------------CCCeEEEEeCCCcEEEecCCCCC-----CCCCCCCcccceeeeec
Q 021160 185 K--LVRLMVGDRHVVNQLEPHP-------------HIPMFATCGIEKTVKLWAPMPTD-----FPPLPDNAEKIMKANKQ 244 (316)
Q Consensus 185 ~--~~~~~~~~~~~v~~~~~~p-------------~~~~l~s~~~d~~i~iwd~~~~~-----~~~~~~~~~~~~~~~~~ 244 (316)
. ....+..|...|.+++|+| ++.+|++++.|+.|++||++... ...+.+|...+..+. +
T Consensus 136 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~-~ 214 (379)
T 3jrp_A 136 GTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVA-W 214 (379)
T ss_dssp SCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEE-E
T ss_pred CceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEE-E
Confidence 3 3456678999999999999 68999999999999999997654 235667778776666 7
Q ss_pred CCC---CceeEEecCCCeEEEEEecccC--------------ccee-EEeecccccccccCCCCeEEEEeccC
Q 021160 245 GRE---DHSRITLTPDVIMHVLRLQRRQ--------------TLAY-RERRYNAADFESDEEEGETYLLGFSD 299 (316)
Q Consensus 245 ~~~---~~~~~s~~~d~~~~~w~~~~~~--------------~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~ 299 (316)
+++ +.++++++.|+.+++|++.... ..+. ..+.|++..+.....+|.|++|++..
T Consensus 215 sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 215 SPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp CCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred CCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence 777 8999999999999999998742 1111 26788888899888899999999874
No 60
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.6e-31 Score=223.14 Aligned_cols=264 Identities=10% Similarity=0.084 Sum_probs=208.1
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
+|.|++||+.+.+....+. +|...|.+++|+|++ ++|++++.||.|++||+.+++.
T Consensus 53 dg~i~vwd~~~~~~~~~~~-----------~h~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~------------ 108 (369)
T 3zwl_B 53 DSSASVWYSLNGERLGTLD-----------GHTGTIWSIDVDCFT-KYCVTGSADYSIKLWDVSNGQC------------ 108 (369)
T ss_dssp SSCEEEEETTTCCEEEEEC-----------CCSSCEEEEEECTTS-SEEEEEETTTEEEEEETTTCCE------------
T ss_pred CCEEEEEeCCCchhhhhhh-----------hcCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCcE------------
Confidence 5889999998876544442 378899999999998 8999999999999999998862
Q ss_pred cccccccCCCcccEEEEEEccCCCeEEEe-cC-----CcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceee
Q 021160 82 FCPRHLIGKNNIHITGLAYSNTSELLISY-ND-----ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVK 155 (316)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 155 (316)
...+ . +...+.+++|+|++++++++ .+ +.|++||+........ ...........+..+.....+.
T Consensus 109 --~~~~-~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 179 (369)
T 3zwl_B 109 --VATW-K-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHE-----LTKVSEEPIHKIITHEGLDAAT 179 (369)
T ss_dssp --EEEE-E-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCC-----EEEECSSCSEEEECCTTCCCEE
T ss_pred --EEEe-e-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCcccee-----ecccccceeeeccCCcCcccee
Confidence 2222 2 67789999999999987775 56 9999999987621110 0011112445556666533499
Q ss_pred eEEEecCCCcEEEEeccCCeEEEEeccC-CeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCCCCCCCCC
Q 021160 156 GVNFFGPNDEYVMSGSDCGHLFIWKKKG-GKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDN 234 (316)
Q Consensus 156 ~~~~~~~~~~~l~~~~~dg~v~~wd~~~-~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 234 (316)
+++| +|+++++++++.+|.|++||+.+ ++.+..+..|...|.+++|+|++++|++++.|+.|++||+++.+......+
T Consensus 180 ~~~~-~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~ 258 (369)
T 3zwl_B 180 VAGW-STKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYET 258 (369)
T ss_dssp EEEE-CGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred EEEE-cCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecC
Confidence 9999 99999999999999999999998 788899999999999999999999999999999999999998773222224
Q ss_pred cccceeeeecCCCCceeEEecCCC--------------eEEEEEecccCcc---------ee-EEeecccccccccCCCC
Q 021160 235 AEKIMKANKQGREDHSRITLTPDV--------------IMHVLRLQRRQTL---------AY-RERRYNAADFESDEEEG 290 (316)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~s~~~d~--------------~~~~w~~~~~~~~---------~~-~~~~~~~~~~~~~~~~~ 290 (316)
...+.... +++++.++++++.++ .+++|++.+++.. +. ..+.|++..+.+...+|
T Consensus 259 ~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg 337 (369)
T 3zwl_B 259 DCPLNTAV-ITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDG 337 (369)
T ss_dssp SSCEEEEE-ECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CCCceeEE-ecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCC
Confidence 45554444 888899999998887 8999998765332 12 26788888999999999
Q ss_pred eEEEEeccCC
Q 021160 291 ETYLLGFSDS 300 (316)
Q Consensus 291 ~v~~~~~~~~ 300 (316)
.|.+|++..+
T Consensus 338 ~v~iw~~~~~ 347 (369)
T 3zwl_B 338 FIRLHHFEKS 347 (369)
T ss_dssp EEEEEEECHH
T ss_pred eEEEEECccc
Confidence 9999999765
No 61
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.5e-32 Score=237.37 Aligned_cols=263 Identities=9% Similarity=0.060 Sum_probs=187.2
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
+|+|+|||+.....................+|...|++++|+|. ..|++|+.||+|++||++++.
T Consensus 234 DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~--~~lasgs~DgtV~lWD~~~~~------------- 298 (524)
T 2j04_B 234 EGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP--TTVVCGFKNGFVAEFDLTDPE------------- 298 (524)
T ss_dssp TSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS--SEEEEEETTSEEEEEETTBCS-------------
T ss_pred CCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC--CeEEEEeCCCEEEEEECCCCC-------------
Confidence 68999999986643210000000111123468899999999985 489999999999999998764
Q ss_pred cccccccCCCcccEEEE--EEccCC-CeEEEe-cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeE
Q 021160 82 FCPRHLIGKNNIHITGL--AYSNTS-ELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGV 157 (316)
Q Consensus 82 ~~~~~~~~~~~~~i~~~--~~~~~~-~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 157 (316)
.+.....+|...|.++ +|+|++ .+|+++ .|++|++||++++ +....+.+|.....+.++
T Consensus 299 -~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~----------------~~~~~~~~~~~~~~v~~v 361 (524)
T 2j04_B 299 -VPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDI----------------ATTKTTVSRFRGSNLVPV 361 (524)
T ss_dssp -SCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGH----------------HHHCEEEEECSCCSCCCE
T ss_pred -CceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCC----------------CcccccccccccCcccce
Confidence 2222237899999999 578887 788885 7999999999887 556666666532237899
Q ss_pred EEecCCCcEEEEeccCCeEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCCCCCCCCCc--
Q 021160 158 NFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNA-- 235 (316)
Q Consensus 158 ~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~-- 235 (316)
+| +|+++.+++++.|++|++||+++++++..+.+|.+.|++++|+|++++|++|+.|++|++||+..+.+..+....
T Consensus 362 ~f-sp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~ 440 (524)
T 2j04_B 362 VY-CPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARRLLHGIKNSSAT 440 (524)
T ss_dssp EE-ETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSSTTTCC------
T ss_pred Ee-CCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHhhccccccCccc
Confidence 99 999999999999999999999999988889999999999999999999999999999999998765443322111
Q ss_pred ---ccceeeeecCCCCceeEEecCCCeEEEEE--------ecccCcceeE-Eeeccc---ccccccCCCCeEEEEeccC
Q 021160 236 ---EKIMKANKQGREDHSRITLTPDVIMHVLR--------LQRRQTLAYR-ERRYNA---ADFESDEEEGETYLLGFSD 299 (316)
Q Consensus 236 ---~~~~~~~~~~~~~~~~~s~~~d~~~~~w~--------~~~~~~~~~~-~~~~~~---~~~~~~~~~~~v~~~~~~~ 299 (316)
..+...+ +++++..+ ....+..+..|. +......++. .+.|+. ..++++..+|.|.+|++..
T Consensus 441 ~~~~~v~~v~-~sp~g~~~-~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~ 517 (524)
T 2j04_B 441 QKSLRLWKWD-YSIKDDKY-RIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSL 517 (524)
T ss_dssp CCCCEEEECB-CCSSSCEE-EECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSC
T ss_pred eeeeEEEEec-cCCCCCeE-EccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEccc
Confidence 1233444 56666533 333322222222 1112222333 788875 4889999999999999854
No 62
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.4e-31 Score=244.28 Aligned_cols=240 Identities=15% Similarity=0.177 Sum_probs=195.0
Q ss_pred CCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEe
Q 021160 31 PMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY 110 (316)
Q Consensus 31 ~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~ 110 (316)
.+|...|++++|+|++..+|++|+.|++|++|++.+.... ...... ...+|...|.+++|+|++++|+++
T Consensus 379 ~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~---------~~~~~~-~~~~h~~~v~~v~~s~~g~~l~sg 448 (694)
T 3dm0_A 379 RAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKA---------YGVAQR-RLTGHSHFVEDVVLSSDGQFALSG 448 (694)
T ss_dssp ECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTC---------SCEEEE-EEECCSSCEEEEEECTTSSEEEEE
T ss_pred ccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcc---------cccccc-eecCCCCcEEEEEECCCCCEEEEE
Confidence 3699999999999987689999999999999999865310 000112 237899999999999999988885
Q ss_pred -cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCeeEEE
Q 021160 111 -NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRL 189 (316)
Q Consensus 111 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~ 189 (316)
.|++|++||+.++ .....+.+|... |.+++| +|++.+|++++.|+.|++||.........
T Consensus 449 s~Dg~v~vwd~~~~----------------~~~~~~~~h~~~--v~~~~~-s~~~~~l~s~s~D~~i~iwd~~~~~~~~~ 509 (694)
T 3dm0_A 449 SWDGELRLWDLAAG----------------VSTRRFVGHTKD--VLSVAF-SLDNRQIVSASRDRTIKLWNTLGECKYTI 509 (694)
T ss_dssp ETTSEEEEEETTTT----------------EEEEEEECCSSC--EEEEEE-CTTSSCEEEEETTSCEEEECTTSCEEEEE
T ss_pred eCCCcEEEEECCCC----------------cceeEEeCCCCC--EEEEEE-eCCCCEEEEEeCCCEEEEEECCCCcceee
Confidence 7999999999887 677888999976 999999 99999999999999999999875544333
Q ss_pred e---ecCccceEEEEEcCCC--CeEEEEeCCCcEEEecCCCCC-CCCCCCCcccceeeeecCCCCceeEEecCCCeEEEE
Q 021160 190 M---VGDRHVVNQLEPHPHI--PMFATCGIEKTVKLWAPMPTD-FPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVL 263 (316)
Q Consensus 190 ~---~~~~~~v~~~~~~p~~--~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w 263 (316)
. .+|...|.+++|+|++ ..|++++.|+.|++||++..+ ...+.+|...+..+. +++++.++++++.|+.|++|
T Consensus 510 ~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~-~spdg~~l~sg~~Dg~i~iw 588 (694)
T 3dm0_A 510 SEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVA-VSPDGSLCASGGKDGVVLLW 588 (694)
T ss_dssp CSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEE-ECTTSSEEEEEETTSBCEEE
T ss_pred ccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEE-EeCCCCEEEEEeCCCeEEEE
Confidence 2 3688899999999987 579999999999999999877 566778888876666 88899999999999999999
Q ss_pred EecccCcc--------ee-EEeecccccccccCCCCeEEEEeccCCC
Q 021160 264 RLQRRQTL--------AY-RERRYNAADFESDEEEGETYLLGFSDSD 301 (316)
Q Consensus 264 ~~~~~~~~--------~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 301 (316)
|+.+++.. +. ..+.|+...+....+ +.|.+||+..+.
T Consensus 589 d~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-~~i~iwd~~~~~ 634 (694)
T 3dm0_A 589 DLAEGKKLYSLEANSVIHALCFSPNRYWLCAATE-HGIKIWDLESKS 634 (694)
T ss_dssp ETTTTEEEECCBCSSCEEEEEECSSSSEEEEEET-TEEEEEETTTTE
T ss_pred ECCCCceEEEecCCCcEEEEEEcCCCcEEEEEcC-CCEEEEECCCCC
Confidence 99775332 11 256777766665544 459999987653
No 63
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.6e-31 Score=225.74 Aligned_cols=244 Identities=12% Similarity=0.037 Sum_probs=190.5
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
+|.|++||+.+.+....+... +|...|.+++|+|++ .+|++++.|+.|++||++..+..
T Consensus 73 dg~i~vwd~~~~~~~~~~~~~---------~~~~~v~~~~~~~~~-~~l~~~~~d~~v~i~d~~~~~~~----------- 131 (372)
T 1k8k_C 73 DRNAYVWTLKGRTWKPTLVIL---------RINRAARCVRWAPNE-KKFAVGSGSRVISICYFEQENDW----------- 131 (372)
T ss_dssp TSCEEEEEEETTEEEEEEECC---------CCSSCEEEEEECTTS-SEEEEEETTSSEEEEEEETTTTE-----------
T ss_pred CCeEEEEECCCCeeeeeEEee---------cCCCceeEEEECCCC-CEEEEEeCCCEEEEEEecCCCcc-----------
Confidence 688999999877654444322 378899999999998 89999999999999999876410
Q ss_pred cccccccCCCcccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCCCCCCccCCcc--ccccCCCcceeeCCcCCceeeeEE
Q 021160 82 FCPRHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPE--DLQKREEPQVYSGHRNSQTVKGVN 158 (316)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~ 158 (316)
.........|...|.+++|+|++++|+++ .|+.|++||++............+ ..........+.+|... +.+++
T Consensus 132 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~ 209 (372)
T 1k8k_C 132 WVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGW--VHGVC 209 (372)
T ss_dssp EEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSC--EEEEE
T ss_pred eeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCe--EEEEE
Confidence 01223336788999999999999988875 799999999764311100000000 01222456667777765 99999
Q ss_pred EecCCCcEEEEeccCCeEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCC--CC---------
Q 021160 159 FFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMP--TD--------- 227 (316)
Q Consensus 159 ~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~--~~--------- 227 (316)
| +|++.+|++++.|+.|++||+++++++..+..|...|.+++|+|++++++++ .|+.|++|++.. +.
T Consensus 210 ~-~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~ 287 (372)
T 1k8k_C 210 F-SANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDV 287 (372)
T ss_dssp E-CSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCC
T ss_pred E-CCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCc
Confidence 9 9999999999999999999999999999999999999999999999988877 899999999877 31
Q ss_pred ------------------------C------CCC-CCCcccceeeeecCCCC---ceeEEecCCCeEEEEEecccCc
Q 021160 228 ------------------------F------PPL-PDNAEKIMKANKQGRED---HSRITLTPDVIMHVLRLQRRQT 270 (316)
Q Consensus 228 ------------------------~------~~~-~~~~~~~~~~~~~~~~~---~~~~s~~~d~~~~~w~~~~~~~ 270 (316)
. ..+ .+|...+..+.+.++++ .++++++.|+.|++|++.+.+.
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~~ 364 (372)
T 1k8k_C 288 PKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLES 364 (372)
T ss_dssp C--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHHH
T ss_pred cccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecChhH
Confidence 0 333 37888888888677777 9999999999999999987643
No 64
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=2.4e-31 Score=228.79 Aligned_cols=254 Identities=14% Similarity=0.207 Sum_probs=201.9
Q ss_pred CceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCce
Q 021160 1 MVLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVD 80 (316)
Q Consensus 1 ~~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~ 80 (316)
+++.|+|||+.+.+..+.+..+ +|...|++++|+|++ ++|++|+.||.|++||+.+++
T Consensus 123 ld~tV~lWd~~tg~~~~~~~~~---------~~~~~V~sv~fspdg-~~lasgs~Dg~v~iWd~~~~~------------ 180 (420)
T 4gga_A 123 LDNSVYLWSASSGDILQLLQME---------QPGEYISSVAWIKEG-NYLAVGTSSAEVQLWDVQQQK------------ 180 (420)
T ss_dssp ETTEEEEEETTTCCEEEEEECC---------STTCCEEEEEECTTS-SEEEEEETTSCEEEEETTTTE------------
T ss_pred eCCEEEEEECCCCCEEEEEEec---------CCCCcEEEEEECCCC-CEEEEEECCCeEEEEEcCCCc------------
Confidence 3689999999998877776653 477889999999999 899999999999999999887
Q ss_pred ecccccccCCCcccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEE
Q 021160 81 TFCPRHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNF 159 (316)
Q Consensus 81 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 159 (316)
+.... .+|...+.+++++ +.+++++ .|+.+++||..... ..+..+.+|... +..+.+
T Consensus 181 --~~~~~-~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~---------------~~~~~~~~h~~~--~~~~~~ 238 (420)
T 4gga_A 181 --RLRNM-TSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAE---------------HHVATLSGHSQE--VCGLRW 238 (420)
T ss_dssp --EEEEE-CCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSS---------------CEEEEEECCSSC--EEEEEE
T ss_pred --EEEEE-eCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccc---------------eeeEEecccccc--eeeeee
Confidence 33333 7889999998875 5677775 79999999987752 455678888876 999998
Q ss_pred ecCCCcEEEEeccCCeEEEEeccCCe----eEEEeecCccceEEEEEcCCCCe-EEE--EeCCCcEEEecCCCCC-CCCC
Q 021160 160 FGPNDEYVMSGSDCGHLFIWKKKGGK----LVRLMVGDRHVVNQLEPHPHIPM-FAT--CGIEKTVKLWAPMPTD-FPPL 231 (316)
Q Consensus 160 ~~~~~~~l~~~~~dg~v~~wd~~~~~----~~~~~~~~~~~v~~~~~~p~~~~-l~s--~~~d~~i~iwd~~~~~-~~~~ 231 (316)
+|++.++++++.|+.+++|+..+++ .+.....|...|.+++|+|.+.. +++ |+.|++|++||+.++. ...+
T Consensus 239 -~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~ 317 (420)
T 4gga_A 239 -APDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAV 317 (420)
T ss_dssp -CTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEE
T ss_pred -cCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceee
Confidence 9999999999999999999998765 35566789999999999997754 444 4589999999999887 3333
Q ss_pred CCCcccceeeeecCCCCceeEEe--cCCCeEEEEEecccCcc---------eeE-EeecccccccccCCCCeEEEEeccC
Q 021160 232 PDNAEKIMKANKQGREDHSRITL--TPDVIMHVLRLQRRQTL---------AYR-ERRYNAADFESDEEEGETYLLGFSD 299 (316)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~s~--~~d~~~~~w~~~~~~~~---------~~~-~~~~~~~~~~~~~~~~~v~~~~~~~ 299 (316)
. +...+.... +.+++..++++ ..|+.|++|++.+++.. +.. .+.|++..++++..|+.|.+|++.+
T Consensus 318 ~-~~~~v~~~~-~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~ 395 (420)
T 4gga_A 318 D-AHSQVCSIL-WSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 395 (420)
T ss_dssp E-CSSCEEEEE-EETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred c-cccceeeee-ecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 3 334455555 56666666554 47999999998765332 222 6889999999999999999999876
Q ss_pred CC
Q 021160 300 SD 301 (316)
Q Consensus 300 ~~ 301 (316)
.+
T Consensus 396 ~~ 397 (420)
T 4gga_A 396 LD 397 (420)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 65
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=3e-31 Score=220.98 Aligned_cols=241 Identities=14% Similarity=0.119 Sum_probs=196.2
Q ss_pred CCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEe-
Q 021160 32 MNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY- 110 (316)
Q Consensus 32 gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~- 110 (316)
+|...|++++|+|++ .++++++ ||.|++||+.+++... ++..+ ....|...|.+++|+|++++++++
T Consensus 49 ~h~~~v~~~~~~~~~-~~l~~~~-dg~i~iw~~~~~~~~~------~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~ 116 (337)
T 1gxr_A 49 NHGEVVCAVTISNPT-RHVYTGG-KGCVKVWDISHPGNKS------PVSQL----DCLNRDNYIRSCKLLPDGCTLIVGG 116 (337)
T ss_dssp CCSSCCCEEEECSSS-SEEEEEC-BSEEEEEETTSTTCCS------CSEEE----ECSCTTSBEEEEEECTTSSEEEEEE
T ss_pred cCCCceEEEEEecCC-cEEEEcC-CCeEEEEECCCCCcee------eeecc----cccCCCCcEEEEEEcCCCCEEEEEc
Confidence 589999999999999 8999988 9999999998765211 11111 013688899999999999977774
Q ss_pred cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCeeEEEe
Q 021160 111 NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLM 190 (316)
Q Consensus 111 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~ 190 (316)
.|+.|++||+.++. ......+..|... +.+++| +|+++++++++.+|.|++||+++++.+..+
T Consensus 117 ~d~~i~~~d~~~~~--------------~~~~~~~~~~~~~--i~~~~~-~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~ 179 (337)
T 1gxr_A 117 EASTLSIWDLAAPT--------------PRIKAELTSSAPA--CYALAI-SPDSKVCFSCCSDGNIAVWDLHNQTLVRQF 179 (337)
T ss_dssp SSSEEEEEECCCC----------------EEEEEEECSSSC--EEEEEE-CTTSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred CCCcEEEEECCCCC--------------cceeeecccCCCc--eEEEEE-CCCCCEEEEEeCCCcEEEEeCCCCceeeee
Confidence 79999999998761 0144566777755 999999 999999999999999999999999999999
Q ss_pred ecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCCCCCCCCCcccceeeeecCCCCceeEEecCCCeEEEEEecccCc
Q 021160 191 VGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQT 270 (316)
Q Consensus 191 ~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~~ 270 (316)
..|...|.+++|+|++++|++++.|+.|++||++.++......+...+..+. +++++.++++++.++.+++|++.+...
T Consensus 180 ~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~-~s~~~~~l~~~~~~~~i~~~~~~~~~~ 258 (337)
T 1gxr_A 180 QGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLG-YCPTGEWLAVGMESSNVEVLHVNKPDK 258 (337)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEE-ECTTSSEEEEEETTSCEEEEETTSSCE
T ss_pred ecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEE-ECCCCCEEEEEcCCCcEEEEECCCCCe
Confidence 9999999999999999999999999999999999876332233555555554 788999999999999999999876533
Q ss_pred cee---------EEeecccccccccCCCCeEEEEeccCCCC
Q 021160 271 LAY---------RERRYNAADFESDEEEGETYLLGFSDSDA 302 (316)
Q Consensus 271 ~~~---------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 302 (316)
... ..+.|++..+.+...+|.+.+|+...+..
T Consensus 259 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~ 299 (337)
T 1gxr_A 259 YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGAS 299 (337)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred EEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeE
Confidence 221 26788888888888999999999877643
No 66
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=2.2e-31 Score=230.59 Aligned_cols=250 Identities=13% Similarity=0.133 Sum_probs=178.6
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCc------------cceEEEEECCCCC-cEEEEEecCCcEEEEeCcCCc
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNS------------IRLNAIVIDPRNP-NYFAVGGSDEYARVYDIRKCH 68 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~------------~~v~~~~~~~~~~-~~l~~g~~dg~v~~wd~~~~~ 68 (316)
+|.|+|||+.+.+..........+......+|. ..|++++|+|++. .+|++++.|+.|++||+.+++
T Consensus 49 dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~ 128 (447)
T 3dw8_B 49 GGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERD 128 (447)
T ss_dssp TSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEE
T ss_pred CCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEeccccc
Confidence 689999999876520000000000000012466 7899999999863 489999999999999998644
Q ss_pred ccCCC-C---------CCCCceec---------------ccccccCCCcccEEEEEEccCCCeEEEecCCcEEEEEcCCC
Q 021160 69 WYSPI-S---------SDTPVDTF---------------CPRHLIGKNNIHITGLAYSNTSELLISYNDELVYLFEKNMG 123 (316)
Q Consensus 69 ~~~~~-~---------~~~~~~~~---------------~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d~~i~iwd~~~~ 123 (316)
..... . ....+..+ +...+..+|...|.+++|+|++++|+++.|+.|++||++..
T Consensus 129 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~d~~i~iwd~~~~ 208 (447)
T 3dw8_B 129 KRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSADDLRINLWHLEIT 208 (447)
T ss_dssp EEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEECSSEEEEEETTEE
T ss_pred CCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEeCCCeEEEEECCCC
Confidence 21000 0 00000000 01122367999999999999999988889999999999843
Q ss_pred CCCCCccCCccccccCCCcc-------eeeCCcCCceeeeEEEecCCC-cEEEEeccCCeEEEEeccCCee----EEEee
Q 021160 124 LGPSPLSLSPEDLQKREEPQ-------VYSGHRNSQTVKGVNFFGPND-EYVMSGSDCGHLFIWKKKGGKL----VRLMV 191 (316)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~i~~~~~~~~~~-~~l~~~~~dg~v~~wd~~~~~~----~~~~~ 191 (316)
. .... .+.+|... |.+++| +|++ .+|++|+.||.|++||+++++. +..+.
T Consensus 209 ~---------------~~~~~~~~~~~~~~~~~~~--v~~~~~-~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 270 (447)
T 3dw8_B 209 D---------------RSFNIVDIKPANMEELTEV--ITAAEF-HPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFE 270 (447)
T ss_dssp E---------------EEEEEEECCCSSGGGCCCC--EEEEEE-CSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEEC
T ss_pred C---------------ceeeeeecccccccccCcc--eEEEEE-CCCCCcEEEEEeCCCeEEEEECcCCccccceeeEec
Confidence 1 1222 35567755 999999 8998 9999999999999999999887 78888
Q ss_pred cCcc------------ceEEEEEcCCCCeEEEEeCCCcEEEecCCC-CC-CCCCCCCccccee--------------eee
Q 021160 192 GDRH------------VVNQLEPHPHIPMFATCGIEKTVKLWAPMP-TD-FPPLPDNAEKIMK--------------ANK 243 (316)
Q Consensus 192 ~~~~------------~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~-~~-~~~~~~~~~~~~~--------------~~~ 243 (316)
.|.. .|.+++|+|++++|++++. +.|++||++. ++ +..+..|...... ...
T Consensus 271 ~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~ 349 (447)
T 3dw8_B 271 EPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECC 349 (447)
T ss_dssp CC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEE
T ss_pred cCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccccceEEE
Confidence 8876 8999999999999999998 9999999986 54 6666666432211 134
Q ss_pred cCCCCceeEEecCCCeEEEEEecccCc
Q 021160 244 QGREDHSRITLTPDVIMHVLRLQRRQT 270 (316)
Q Consensus 244 ~~~~~~~~~s~~~d~~~~~w~~~~~~~ 270 (316)
+++++.++++++.|+.|++||+.+++.
T Consensus 350 ~s~~~~~l~s~s~dg~v~iwd~~~~~~ 376 (447)
T 3dw8_B 350 WNGSDSVVMTGSYNNFFRMFDRNTKRD 376 (447)
T ss_dssp ECTTSSEEEEECSTTEEEEEETTTCCE
T ss_pred ECCCCCEEEEeccCCEEEEEEcCCCcc
Confidence 888999999999999999999987654
No 67
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=3.7e-31 Score=226.16 Aligned_cols=265 Identities=15% Similarity=0.198 Sum_probs=200.2
Q ss_pred eeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECC-CCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 3 LFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDP-RNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 3 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~-~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
+.+++|++...+....+. +|.+.|++++|+| ++ ++|++|+.||.|++||+.+++........ ....
T Consensus 23 ~~~~v~~~~~~~~~~~~~-----------~h~~~v~~~~~s~~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-~~~~ 89 (408)
T 4a11_B 23 STRRVLGLELNKDRDVER-----------IHGGGINTLDIEPVEG-RYMLSGGSDGVIVLYDLENSSRQSYYTCK-AVCS 89 (408)
T ss_dssp HHHHHHTEEECTTEEECC-----------CCSSCEEEEEECTTTC-CEEEEEETTSCEEEEECCCCSSSSCEEEC-EEEE
T ss_pred CcceeeccccCcceeeee-----------ccCCcEEEEEEecCCC-CEEEEEcCCCeEEEEECCCCcccceEecc-cccc
Confidence 446778877666544432 4899999999999 77 89999999999999999987632211000 0000
Q ss_pred cccccccCCCcccEEEEEEcc-CCCeEEEe-cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEE
Q 021160 82 FCPRHLIGKNNIHITGLAYSN-TSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNF 159 (316)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~~~-~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 159 (316)
. ......+|...|.+++|+| ++.+|+++ .|+.|++||+.++ .....+. +... +.++.+
T Consensus 90 ~-~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~----------------~~~~~~~-~~~~--~~~~~~ 149 (408)
T 4a11_B 90 I-GRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTL----------------QTADVFN-FEET--VYSHHM 149 (408)
T ss_dssp E-CTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTT----------------EEEEEEE-CSSC--EEEEEE
T ss_pred c-cccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCC----------------ccceecc-CCCc--eeeeEe
Confidence 0 0111146899999999999 56677774 7999999999887 4555555 4433 888888
Q ss_pred ecC---CCcEEEEeccCCeEEEEeccCCeeEEEeecCccceEEEEEcCCCCe-EEEEeCCCcEEEecCCCCC--C-----
Q 021160 160 FGP---NDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPM-FATCGIEKTVKLWAPMPTD--F----- 228 (316)
Q Consensus 160 ~~~---~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~-l~s~~~d~~i~iwd~~~~~--~----- 228 (316)
.+ ++.++++++.++.|++||+++++.+..+..|...|.+++|+|+++. |++++.|+.|++||++... .
T Consensus 150 -~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~ 228 (408)
T 4a11_B 150 -SPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQ 228 (408)
T ss_dssp -CSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCT
T ss_pred -ecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccc
Confidence 66 4559999999999999999999999999999999999999999985 8899999999999997653 1
Q ss_pred ----------CCCCCCcccceeeeecCCCCceeEEecCCCeEEEEEecccCc----------------------------
Q 021160 229 ----------PPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQT---------------------------- 270 (316)
Q Consensus 229 ----------~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~~---------------------------- 270 (316)
.....|...+..+. +++++.++++++.|+.+++|++.+++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (408)
T 4a11_B 229 HNGKKSQAVESANTAHNGKVNGLC-FTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEF 307 (408)
T ss_dssp TTTCSCCCTTTSSCSCSSCEEEEE-ECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCE
T ss_pred cccccceeeccccccccCceeEEE-EcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceE
Confidence 11245666666665 788999999999999999999875321
Q ss_pred ----------------------------cee-EEeecccccccccCCCCeEEEEeccCCCC
Q 021160 271 ----------------------------LAY-RERRYNAADFESDEEEGETYLLGFSDSDA 302 (316)
Q Consensus 271 ----------------------------~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 302 (316)
.+. ..+.|++..+.++..+|.|.+|++...+.
T Consensus 308 ~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~ 368 (408)
T 4a11_B 308 VFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEP 368 (408)
T ss_dssp EEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC---
T ss_pred EEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCc
Confidence 111 25777888888888899999999887653
No 68
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.2e-32 Score=231.84 Aligned_cols=233 Identities=12% Similarity=0.121 Sum_probs=179.0
Q ss_pred CccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEe-c
Q 021160 33 NSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-N 111 (316)
Q Consensus 33 h~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~ 111 (316)
|..+|++++|+|++ ++|++|+.|+.|++||+.++... ....+ .+|...|.+++|+|++++|+++ .
T Consensus 10 ~~~~v~~~~~s~~g-~~l~~~~~d~~i~iw~~~~~~~~------------~~~~~-~~h~~~v~~~~~s~~~~~l~s~s~ 75 (377)
T 3dwl_C 10 LPKPSYEHAFNSQR-TEFVTTTATNQVELYEQDGNGWK------------HARTF-SDHDKIVTCVDWAPKSNRIVTCSQ 75 (377)
T ss_dssp CSSCCSCCEECSSS-SEEECCCSSSCBCEEEEETTEEE------------ECCCB-CCCSSCEEEEEECTTTCCEEEEET
T ss_pred CCCcEEEEEECCCC-CEEEEecCCCEEEEEEccCCceE------------EEEEE-ecCCceEEEEEEeCCCCEEEEEeC
Confidence 46789999999999 89999999999999999976210 22223 6899999999999999988885 7
Q ss_pred CCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCe---eEE
Q 021160 112 DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGK---LVR 188 (316)
Q Consensus 112 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~---~~~ 188 (316)
|+.|++||+.++. .......+.+|... |.+++| +|++++|++++.|+.|++||+++++ ...
T Consensus 76 d~~v~vwd~~~~~-------------~~~~~~~~~~~~~~--v~~~~~-~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 139 (377)
T 3dwl_C 76 DRNAYVYEKRPDG-------------TWKQTLVLLRLNRA--ATFVRW-SPNEDKFAVGSGARVISVCYFEQENDWWVSK 139 (377)
T ss_dssp TSSEEEC-------------------CCCCEEECCCCSSC--EEEEEC-CTTSSCCEEEESSSCEEECCC-----CCCCE
T ss_pred CCeEEEEEcCCCC-------------ceeeeeEecccCCc--eEEEEE-CCCCCEEEEEecCCeEEEEEECCcccceeee
Confidence 9999999998761 00245566677766 999999 9999999999999999999999887 467
Q ss_pred Eeec-CccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC-------------------CCCCCCCcccceeeeecCCCC
Q 021160 189 LMVG-DRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD-------------------FPPLPDNAEKIMKANKQGRED 248 (316)
Q Consensus 189 ~~~~-~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~ 248 (316)
.+.. |...|.+++|+|++++|++++.|+.|++||++... +..+ +|...+..+. +++++
T Consensus 140 ~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~-~sp~~ 217 (377)
T 3dwl_C 140 HLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVG-FSPSG 217 (377)
T ss_dssp EECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEE-ECTTS
T ss_pred EeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEE-ECCCC
Confidence 7777 99999999999999999999999999999985321 2333 6667776665 88899
Q ss_pred ceeEEecCCCeEEEEEecccCc----c---------ee-EEeecccccccccCCCCeEEEEecc
Q 021160 249 HSRITLTPDVIMHVLRLQRRQT----L---------AY-RERRYNAADFESDEEEGETYLLGFS 298 (316)
Q Consensus 249 ~~~~s~~~d~~~~~w~~~~~~~----~---------~~-~~~~~~~~~~~~~~~~~~v~~~~~~ 298 (316)
.++++++.|+.|++|++.+++. . +. ..+.|++..++++.+++.+ +|+..
T Consensus 218 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 218 NALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp SCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred CEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence 9999999999999999987754 1 11 2577788888877766555 66554
No 69
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=8.3e-32 Score=226.87 Aligned_cols=234 Identities=13% Similarity=0.093 Sum_probs=178.6
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECC-CCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCce
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDP-RNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVD 80 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~-~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~ 80 (316)
+|.|++||+.+.+....+. +|...|.+++|+| ++ .+|++|+.||.|++||+++++.
T Consensus 94 dg~i~v~d~~~~~~~~~~~-----------~~~~~i~~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~----------- 150 (366)
T 3k26_A 94 RGIIRIINPITMQCIKHYV-----------GHGNAINELKFHPRDP-NLLLSVSKDHALRLWNIQTDTL----------- 150 (366)
T ss_dssp TCEEEEECTTTCCEEEEEE-----------SCCSCEEEEEECSSCT-TEEEEEETTSCEEEEETTTTEE-----------
T ss_pred CCEEEEEEchhceEeeeec-----------CCCCcEEEEEECCCCC-CEEEEEeCCCeEEEEEeecCeE-----------
Confidence 6899999998876655443 3788999999999 66 8999999999999999998762
Q ss_pred ecccccc--cCCCcccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCCCC-----------CCccCCccc-cccCCCccee
Q 021160 81 TFCPRHL--IGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGP-----------SPLSLSPED-LQKREEPQVY 145 (316)
Q Consensus 81 ~~~~~~~--~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~-----------~~~~~~~~~-~~~~~~~~~~ 145 (316)
...+ ...|...|.+++|+|++++|+++ .|+.|++||++++... ....+.... ..........
T Consensus 151 ---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (366)
T 3k26_A 151 ---VAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTR 227 (366)
T ss_dssp ---EEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEEC
T ss_pred ---EEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccc
Confidence 2221 25788999999999999988875 7999999999865200 000000000 0000111223
Q ss_pred eCCcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCe--------------eEEEeecCccceEEEEEcCC--CCeE
Q 021160 146 SGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGK--------------LVRLMVGDRHVVNQLEPHPH--IPMF 209 (316)
Q Consensus 146 ~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~--------------~~~~~~~~~~~v~~~~~~p~--~~~l 209 (316)
..|... |.+++| + ++++++++.|+.|++||+.+++ .+..+..|...|.+++|+|+ +++|
T Consensus 228 ~~~~~~--v~~~~~-~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l 302 (366)
T 3k26_A 228 DIHRNY--VDCVRW-L--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKML 302 (366)
T ss_dssp SSCSSC--CCEEEE-E--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEE
T ss_pred cCCcce--EEEEEE-c--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEE
Confidence 346655 999999 5 7799999999999999988764 37788889999999999999 9999
Q ss_pred EEEeCCCcEEEecCCCCCCC-----CCCCC--cccceeeeecCCCCceeEEecCCCeEEEEEecc
Q 021160 210 ATCGIEKTVKLWAPMPTDFP-----PLPDN--AEKIMKANKQGREDHSRITLTPDVIMHVLRLQR 267 (316)
Q Consensus 210 ~s~~~d~~i~iwd~~~~~~~-----~~~~~--~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~ 267 (316)
++++.||.|++||+..++.. .+..| ...+..+. ++++++++++++.|+.|++||+.+
T Consensus 303 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~-~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 303 ALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTS-FSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp EEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEE-ECTTSSEEEEEETTSEEEEEEC--
T ss_pred EEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEE-eCCCCCeEEEEeCCCEEEEEEecC
Confidence 99999999999999987522 45555 56665555 888999999999999999999763
No 70
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=8e-31 Score=219.00 Aligned_cols=249 Identities=12% Similarity=0.115 Sum_probs=180.4
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCC--CCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCc
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPR--NPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPV 79 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~--~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~ 79 (316)
+|.|++||+.+......... .. .+|...|++++|+|. + .+|++|+.||.|++||+++++.... .
T Consensus 32 dg~i~iw~~~~~~~~~~~~~-~~------~~~~~~v~~~~~~~~~d~-~~l~s~~~dg~v~vwd~~~~~~~~~------~ 97 (351)
T 3f3f_A 32 DQHIKVFKLDKDTSNWELSD-SW------RAHDSSIVAIDWASPEYG-RIIASASYDKTVKLWEEDPDQEECS------G 97 (351)
T ss_dssp TSEEEEEEECSSSCCEEEEE-EE------ECCSSCEEEEEECCGGGC-SEEEEEETTSCEEEEEECTTSCTTS------S
T ss_pred CCeEEEEECCCCCCcceecc-ee------ccCCCcEEEEEEcCCCCC-CEEEEEcCCCeEEEEecCCCccccc------c
Confidence 68999999987643211111 11 148899999999994 6 8999999999999999987642110 0
Q ss_pred eecccccccCCCcccEEEEEEccC--CCeEEE-ecCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeee
Q 021160 80 DTFCPRHLIGKNNIHITGLAYSNT--SELLIS-YNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKG 156 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~s-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 156 (316)
..+........|...|.+++|+|+ +.++++ +.|+.|++||++++........... . . ........+... +.+
T Consensus 98 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~-~-~-~~~~~~~~~~~~--~~~ 172 (351)
T 3f3f_A 98 RRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSE-M-K-VLSIPPANHLQS--DFC 172 (351)
T ss_dssp CSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEE-E-E-SCSCCCSSCSCC--CEE
T ss_pred cCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccc-c-c-ccccccCCcccc--eeE
Confidence 000111222678999999999999 887777 5799999999987721110000000 0 0 000001134444 999
Q ss_pred EEEecCC---CcEEEEeccCCeEEEEeccCCee--EEEeecCccceEEEEEcCCC----CeEEEEeCCCcEEEecCCCCC
Q 021160 157 VNFFGPN---DEYVMSGSDCGHLFIWKKKGGKL--VRLMVGDRHVVNQLEPHPHI----PMFATCGIEKTVKLWAPMPTD 227 (316)
Q Consensus 157 ~~~~~~~---~~~l~~~~~dg~v~~wd~~~~~~--~~~~~~~~~~v~~~~~~p~~----~~l~s~~~d~~i~iwd~~~~~ 227 (316)
++| +|+ +.++++++.++.+.+|+...++. +..+.+|...|.+++|+|++ ++|++++.|+.|++||++...
T Consensus 173 ~~~-~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~ 251 (351)
T 3f3f_A 173 LSW-CPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKL 251 (351)
T ss_dssp EEE-CCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC
T ss_pred EEe-ccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCc
Confidence 999 886 99999999999998888877765 66778899999999999998 789999999999999987641
Q ss_pred -----------------------------------------------CCCCCCCcccceeeeecCCCCceeEEecCCCeE
Q 021160 228 -----------------------------------------------FPPLPDNAEKIMKANKQGREDHSRITLTPDVIM 260 (316)
Q Consensus 228 -----------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~ 260 (316)
+..+.+|...+..+. +++++.++++++.|+.|
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~-~s~~~~~l~s~~~dg~v 330 (351)
T 3f3f_A 252 SPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVS-WNLTGTILSSAGDDGKV 330 (351)
T ss_dssp ---------------------------------------CCSEEEEEEEEECTTSSCEEEEE-ECSSSCCEEEEETTSCE
T ss_pred CccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEE-EcCCCCEEEEecCCCcE
Confidence 233445667776665 78888999999999999
Q ss_pred EEEEecccCcc
Q 021160 261 HVLRLQRRQTL 271 (316)
Q Consensus 261 ~~w~~~~~~~~ 271 (316)
++|++..++..
T Consensus 331 ~iw~~~~~~~~ 341 (351)
T 3f3f_A 331 RLWKATYSNEF 341 (351)
T ss_dssp EEEEECTTSCE
T ss_pred EEEecCcCcch
Confidence 99999877554
No 71
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2.8e-31 Score=226.44 Aligned_cols=230 Identities=10% Similarity=0.101 Sum_probs=181.8
Q ss_pred ceeeEEEEeeCCCc-----ceEEEeccccccccCCCC-----ccceEEEEEC----CCCCcE-EEEEecCCcEEEEeCcC
Q 021160 2 VLFNMLFDLRSDSA-----TRLFYCSSFSENSKQPMN-----SIRLNAIVID----PRNPNY-FAVGGSDEYARVYDIRK 66 (316)
Q Consensus 2 ~g~v~vwd~~~~~~-----~~~~~~~~~~~~~~~~gh-----~~~v~~~~~~----~~~~~~-l~~g~~dg~v~~wd~~~ 66 (316)
+|.|++||+.+.+. ...+. +| ...|.+++|+ |++ .+ |++++.||.|++||+++
T Consensus 90 dg~i~iw~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~v~~~~~~~~~~~~~-~~~l~~~~~dg~i~iwd~~~ 157 (397)
T 1sq9_A 90 SGDLLFYRITREDETKKVIFEKLD-----------LLDSDMKKHSFWALKWGASNDRLL-SHRLVATDVKGTTYIWKFHP 157 (397)
T ss_dssp TSCEEEEEEEECTTTCCEEEEEEC-----------CSCTTGGGSCEEEEEEECCC-----CEEEEEEETTSCEEEEEEES
T ss_pred CCCEEEEEccCCcccccccceeec-----------ccccccCCCcEEEEEEeeccCCCC-ceEEEEEeCCCcEEEEeCCc
Confidence 68999999998765 22222 24 5899999999 988 78 99999999999999987
Q ss_pred ------CcccCCCCCCCCceeccc-ccccCCCcccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCCCCCCccCCcccccc
Q 021160 67 ------CHWYSPISSDTPVDTFCP-RHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQK 138 (316)
Q Consensus 67 ------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 138 (316)
++.... .+...+.. ......|...|.+++|+|++ +++++ .|+.|++||++++
T Consensus 158 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~--------------- 217 (397)
T 1sq9_A 158 FADESNSLTLNW----SPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTL--------------- 217 (397)
T ss_dssp SSSHHHHTTTCC----CCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTT---------------
T ss_pred cccccccceeec----cCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCC---------------
Confidence 442110 00001000 00114578899999999999 88885 6999999999887
Q ss_pred CCCcceeeC---C---cCCceeeeEEEecCCCcEEEEeccC---CeEEEEeccCCeeEEEeec-------------Cccc
Q 021160 139 REEPQVYSG---H---RNSQTVKGVNFFGPNDEYVMSGSDC---GHLFIWKKKGGKLVRLMVG-------------DRHV 196 (316)
Q Consensus 139 ~~~~~~~~~---~---~~~~~i~~~~~~~~~~~~l~~~~~d---g~v~~wd~~~~~~~~~~~~-------------~~~~ 196 (316)
+....+.. | ... +.+++| +|++.+|++++.| +.|++||+++++.+..+.+ |...
T Consensus 218 -~~~~~~~~~~~h~~~~~~--i~~i~~-~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (397)
T 1sq9_A 218 -RPLYNFESQHSMINNSNS--IRSVKF-SPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSW 293 (397)
T ss_dssp -EEEEEEECCC---CCCCC--EEEEEE-CSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSC
T ss_pred -ceeEEEeccccccccCCc--cceEEE-CCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCc
Confidence 67777887 7 655 999999 9999999999999 9999999999999999988 9999
Q ss_pred eEEEEEcCCCCeEEEEeCCCcEEEecCCCCC-CCCCC------CC---------------cccceeeeecCCCC------
Q 021160 197 VNQLEPHPHIPMFATCGIEKTVKLWAPMPTD-FPPLP------DN---------------AEKIMKANKQGRED------ 248 (316)
Q Consensus 197 v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~-~~~~~------~~---------------~~~~~~~~~~~~~~------ 248 (316)
|.+++|+|++++|++++.|+.|++||++..+ +..+. .| ...+..+. +.+++
T Consensus 294 v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~-~~~~g~~~~~~ 372 (397)
T 1sq9_A 294 VMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVK-FLKKGWRSGMG 372 (397)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEE-EECTTTSBSTT
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEE-ecccccccccc
Confidence 9999999999999999999999999998876 44454 55 67776666 66766
Q ss_pred ----ceeEEecCCCeEEEEEeccc
Q 021160 249 ----HSRITLTPDVIMHVLRLQRR 268 (316)
Q Consensus 249 ----~~~~s~~~d~~~~~w~~~~~ 268 (316)
.++++++.|+.|++|++.++
T Consensus 373 ~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 373 ADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp CTTSCEEEEEETTTEEEEEEEEC-
T ss_pred ccccceEEEecCCCcEEEEEcCCC
Confidence 79999999999999998865
No 72
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=9.3e-31 Score=218.60 Aligned_cols=249 Identities=13% Similarity=0.113 Sum_probs=195.2
Q ss_pred CCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEcc--CCCeEE
Q 021160 31 PMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSN--TSELLI 108 (316)
Q Consensus 31 ~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~ 108 (316)
.||...|++++|+|++ .+|++|+.||.|++||+.++... ........+|...|.+++|+| ++++|+
T Consensus 8 ~gH~~~v~~~~~~~~~-~~l~~~~~dg~i~iw~~~~~~~~-----------~~~~~~~~~~~~~v~~~~~~~~~d~~~l~ 75 (351)
T 3f3f_A 8 SGHDDLVHDVVYDFYG-RHVATCSSDQHIKVFKLDKDTSN-----------WELSDSWRAHDSSIVAIDWASPEYGRIIA 75 (351)
T ss_dssp CCCSSCEEEEEECSSS-SEEEEEETTSEEEEEEECSSSCC-----------EEEEEEEECCSSCEEEEEECCGGGCSEEE
T ss_pred cccccceeEEEEcCCC-CEEEEeeCCCeEEEEECCCCCCc-----------ceecceeccCCCcEEEEEEcCCCCCCEEE
Confidence 4799999999999998 89999999999999999865410 011122267899999999999 588888
Q ss_pred Ee-cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCC--CcEEEEeccCCeEEEEeccCCe
Q 021160 109 SY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPN--DEYVMSGSDCGHLFIWKKKGGK 185 (316)
Q Consensus 109 s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~l~~~~~dg~v~~wd~~~~~ 185 (316)
++ .|+.|++||++.+..... ....+....+.+|... |.+++| +|+ +.++++++.||.|++||+++++
T Consensus 76 s~~~dg~v~vwd~~~~~~~~~-------~~~~~~~~~~~~~~~~--v~~~~~-~~~~~~~~l~~~~~dg~v~iwd~~~~~ 145 (351)
T 3f3f_A 76 SASYDKTVKLWEEDPDQEECS-------GRRWNKLCTLNDSKGS--LYSVKF-APAHLGLKLACLGNDGILRLYDALEPS 145 (351)
T ss_dssp EEETTSCEEEEEECTTSCTTS-------SCSEEEEEEECCCSSC--EEEEEE-CCGGGCSEEEEEETTCEEEEEECSSTT
T ss_pred EEcCCCeEEEEecCCCccccc-------ccCcceeeeecccCCc--eeEEEE-cCCCCCcEEEEecCCCcEEEecCCChH
Confidence 74 799999999987621000 0000235566777766 999999 898 9999999999999999998876
Q ss_pred eEEEee-------------cCccceEEEEEcCC---CCeEEEEeCCCcEEEecCCCCC---CCCCCCCcccceeeeecCC
Q 021160 186 LVRLMV-------------GDRHVVNQLEPHPH---IPMFATCGIEKTVKLWAPMPTD---FPPLPDNAEKIMKANKQGR 246 (316)
Q Consensus 186 ~~~~~~-------------~~~~~v~~~~~~p~---~~~l~s~~~d~~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~~ 246 (316)
.+..+. .|...+.+++|+|+ +..+++++.|+.+.+|+...+. ...+.+|...+..+. +++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~-~~p 224 (351)
T 3f3f_A 146 DLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSIS-WAP 224 (351)
T ss_dssp CTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEE-ECC
T ss_pred HhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEE-ECC
Confidence 543322 57788999999997 8899999999999888887765 556777888887776 677
Q ss_pred CC----ceeEEecCCCeEEEEEecccC-----------------------------------------------------
Q 021160 247 ED----HSRITLTPDVIMHVLRLQRRQ----------------------------------------------------- 269 (316)
Q Consensus 247 ~~----~~~~s~~~d~~~~~w~~~~~~----------------------------------------------------- 269 (316)
++ .++++++.|+.|++|++..+.
T Consensus 225 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (351)
T 3f3f_A 225 SIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDD 304 (351)
T ss_dssp CSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECT
T ss_pred CCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEec
Confidence 66 799999999999999998631
Q ss_pred --cceeE-EeecccccccccCCCCeEEEEeccCCCC
Q 021160 270 --TLAYR-ERRYNAADFESDEEEGETYLLGFSDSDA 302 (316)
Q Consensus 270 --~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 302 (316)
..+.. .+.|++..++++..+|.|.+|++..++.
T Consensus 305 h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~ 340 (351)
T 3f3f_A 305 HNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNE 340 (351)
T ss_dssp TSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSC
T ss_pred ccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcc
Confidence 11222 6888888999999999999999987543
No 73
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-30 Score=219.97 Aligned_cols=228 Identities=11% Similarity=0.143 Sum_probs=181.4
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCC--CCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCc
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPR--NPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPV 79 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~--~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~ 79 (316)
+|.|+|||+........... .+|...|++++|+|+ + .+|++|+.||.|++||+.+++..
T Consensus 32 dg~i~iw~~~~~~~~~~~~~---------~~h~~~v~~~~~~~~~~~-~~l~s~~~dg~v~iwd~~~~~~~--------- 92 (379)
T 3jrp_A 32 DKTIKIFEVEGETHKLIDTL---------TGHEGPVWRVDWAHPKFG-TILASCSYDGKVLIWKEENGRWS--------- 92 (379)
T ss_dssp TSCEEEEEEETTEEEEEEEE---------CCCSSCEEEEEECCGGGC-SEEEEEETTSCEEEEEEETTEEE---------
T ss_pred CCcEEEEecCCCcceeeeEe---------cCCCCcEEEEEeCCCCCC-CEEEEeccCCEEEEEEcCCCcee---------
Confidence 68899999985433222222 248899999999977 6 89999999999999999987521
Q ss_pred eecccccccCCCcccEEEEEEccC--CCeEEE-ecCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeee
Q 021160 80 DTFCPRHLIGKNNIHITGLAYSNT--SELLIS-YNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKG 156 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~s-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 156 (316)
.......|...|.+++|+|+ +.++++ +.|+.|++||+..... .....+..|... |.+
T Consensus 93 ----~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~--------------~~~~~~~~~~~~--v~~ 152 (379)
T 3jrp_A 93 ----QIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT--------------TSPIIIDAHAIG--VNS 152 (379)
T ss_dssp ----EEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSC--------------CCEEEEECCTTC--EEE
T ss_pred ----EeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCc--------------eeeEEecCCCCc--eEE
Confidence 11222678899999999999 887777 5799999999987610 133455677765 999
Q ss_pred EEEecC-------------CCcEEEEeccCCeEEEEeccCCe----eEEEeecCccceEEEEEcCC---CCeEEEEeCCC
Q 021160 157 VNFFGP-------------NDEYVMSGSDCGHLFIWKKKGGK----LVRLMVGDRHVVNQLEPHPH---IPMFATCGIEK 216 (316)
Q Consensus 157 ~~~~~~-------------~~~~l~~~~~dg~v~~wd~~~~~----~~~~~~~~~~~v~~~~~~p~---~~~l~s~~~d~ 216 (316)
++| +| ++.++++++.|+.|++||+++++ ....+.+|...|.+++|+|+ +++|++++.|+
T Consensus 153 ~~~-~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg 231 (379)
T 3jrp_A 153 ASW-APATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDR 231 (379)
T ss_dssp EEE-CCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTS
T ss_pred EEE-cCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCC
Confidence 999 78 69999999999999999998764 45677789999999999999 88999999999
Q ss_pred cEEEecCCCCC------CCCCCCCcccceeeeecCCCCceeEEecCCCeEEEEEecccCc
Q 021160 217 TVKLWAPMPTD------FPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQT 270 (316)
Q Consensus 217 ~i~iwd~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~~ 270 (316)
.|++||++... ......+...+..+. +++++.++++++.|+.+++|++.....
T Consensus 232 ~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~-~s~~g~~l~~~~~dg~i~iw~~~~~~~ 290 (379)
T 3jrp_A 232 TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRAS-WSLSGNVLALSGGDNKVTLWKENLEGK 290 (379)
T ss_dssp CEEEEEESSTTSCCEEEESSSSCCSSCEEEEE-ECSSSCCEEEEESSSSEEEEEEEETTE
T ss_pred EEEEEeCCCCCccceeeeeccccCCCcEEEEE-EcCCCCEEEEecCCCcEEEEeCCCCCc
Confidence 99999998763 233334666665555 889999999999999999999986543
No 74
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-30 Score=217.89 Aligned_cols=257 Identities=8% Similarity=-0.046 Sum_probs=184.9
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
+|.|++||+.+.+....+. ...|.++.|+|. +++++.|+.|++|+..............
T Consensus 57 Dg~v~iwd~~~~~~~~~~~-------------~~~v~~~~~~~~----~~s~s~D~~i~~w~~~~~~~~~~~~~~~---- 115 (343)
T 3lrv_A 57 DGALHFTQLKDSKTITTIT-------------TPNPRTGGEHPA----IISRGPCNRLLLLYPGNQITILDSKTNK---- 115 (343)
T ss_dssp TTEEEEEEESSSSCEEEEE-------------EECCCTTCCCCS----EEEECSTTEEEEEETTTEEEEEETTTCC----
T ss_pred CCcEEEEECCCCcEEEEEe-------------cCCceeeeeCCc----eEEecCCCeEEEEEccCceEEeecCCcc----
Confidence 6899999999887655554 235778889885 9999999999999876321100000000
Q ss_pred cccccccCCCcccEEEEEEcc--CCCeEEE-ecCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEE
Q 021160 82 FCPRHLIGKNNIHITGLAYSN--TSELLIS-YNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVN 158 (316)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~~~--~~~~l~s-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 158 (316)
........|...|.+++|+| +++++++ +.|++|++||++++ +....+..+.. ..+.+++
T Consensus 116 -~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~----------------~~~~~~~~~~~-~~i~~~~ 177 (343)
T 3lrv_A 116 -VLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDD----------------SQYIVHSAKSD-VEYSSGV 177 (343)
T ss_dssp -EEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSS----------------CEEEEECCCSS-CCCCEEE
T ss_pred -eeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCC----------------cEEEEEecCCC-CceEEEE
Confidence 12222245678899999999 9998887 47999999999887 45444433322 2399999
Q ss_pred EecCCCcEEEEeccCCeEEEEeccCCeeE-EEeec-CccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC-CCCCCC--
Q 021160 159 FFGPNDEYVMSGSDCGHLFIWKKKGGKLV-RLMVG-DRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD-FPPLPD-- 233 (316)
Q Consensus 159 ~~~~~~~~l~~~~~dg~v~~wd~~~~~~~-~~~~~-~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~-~~~~~~-- 233 (316)
| +|++.+|++|+.||.|++||+++++.+ ..+.. |...|.+++|+|++.+|++++ |+.|++||++..+ ...+..
T Consensus 178 ~-~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~ 255 (343)
T 3lrv_A 178 L-HKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYT 255 (343)
T ss_dssp E-CTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCB
T ss_pred E-CCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccc
Confidence 9 999999999999999999999999887 78887 999999999999999999999 5599999999876 334433
Q ss_pred -Ccccce-eeeecCCCCceeEEecC-CCeEEEEEecccCcc-ee-----EEeec---ccccccccCCCCeEEEEeccC
Q 021160 234 -NAEKIM-KANKQGREDHSRITLTP-DVIMHVLRLQRRQTL-AY-----RERRY---NAADFESDEEEGETYLLGFSD 299 (316)
Q Consensus 234 -~~~~~~-~~~~~~~~~~~~~s~~~-d~~~~~w~~~~~~~~-~~-----~~~~~---~~~~~~~~~~~~~v~~~~~~~ 299 (316)
+...+. ....+++++.++++++. |+.+++|++.+.... .. ..+.+ +...+.....++.+.++-.++
T Consensus 256 ~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~ 333 (343)
T 3lrv_A 256 IPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTKDEESALCLQSDTADFTDMDVVCGDGGIAAILKTN 333 (343)
T ss_dssp C-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEEEEEEEECCC----CCCCEEEEEEETTEEEEEEECS
T ss_pred cccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccceEecCceeEecCccccccceeEEEecCCceEEEEecC
Confidence 222222 13448889999999888 999999999665332 11 13333 555666666667676665443
No 75
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.98 E-value=6.1e-30 Score=210.93 Aligned_cols=250 Identities=12% Similarity=0.123 Sum_probs=199.0
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
+|.|++||+.+.+....+.. |...|.+++|+|++ .++++|+.|+.+++|++...... .
T Consensus 38 dg~v~vw~~~~~~~~~~~~~-----------~~~~v~~~~~~~~~-~~l~~~~~dg~i~~~~~~~~~~~------~---- 95 (313)
T 3odt_A 38 DGTVRLWSKDDQWLGTVVYT-----------GQGFLNSVCYDSEK-ELLLFGGKDTMINGVPLFATSGE------D---- 95 (313)
T ss_dssp TSEEEEEEESSSEEEEEEEE-----------CSSCEEEEEEETTT-TEEEEEETTSCEEEEETTCCTTS------C----
T ss_pred CCcEEEEECCCCEEEEEeec-----------CCccEEEEEECCCC-CEEEEecCCCeEEEEEeeecCCC------C----
Confidence 68999999977665545443 67899999999998 89999999999999999865311 1
Q ss_pred cccccccCCCcccEEEEEEccCCCeEEE-ecCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEe
Q 021160 82 FCPRHLIGKNNIHITGLAYSNTSELLIS-YNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFF 160 (316)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~~~~~~~l~s-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 160 (316)
.... ..+|...|.+++| ++.++++ +.|+.|++|| .. .....+..|... +.+++|.
T Consensus 96 -~~~~-~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~----------------~~~~~~~~~~~~--v~~~~~~ 151 (313)
T 3odt_A 96 -PLYT-LIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EG----------------SLVYNLQAHNAS--VWDAKVV 151 (313)
T ss_dssp -C-CE-ECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TT----------------EEEEEEECCSSC--EEEEEEE
T ss_pred -cccc-hhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CC----------------cEEEecccCCCc--eeEEEEc
Confidence 1122 2678999999999 4566666 5799999999 33 466778888866 9999995
Q ss_pred cCCCcEEEEeccCCeEEEEeccCCeeEEEeec-CccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC-CCCCCCCcccc
Q 021160 161 GPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVG-DRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD-FPPLPDNAEKI 238 (316)
Q Consensus 161 ~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~-~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~~~~ 238 (316)
++++.++++++.|+.|++|| ..+....+.. |...+.+++|+|++. +++++.|+.|++||++.++ +..+..|...+
T Consensus 152 ~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i 228 (313)
T 3odt_A 152 SFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFV 228 (313)
T ss_dssp ETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCE
T ss_pred cCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceE
Confidence 55999999999999999999 5667777776 889999999999988 8999999999999999877 66666788877
Q ss_pred eeeeecCCCCceeEEecCCCeEEEEEecccCccee----------EEeecccccccccCCCCeEEEEeccCCCCC
Q 021160 239 MKANKQGREDHSRITLTPDVIMHVLRLQRRQTLAY----------RERRYNAADFESDEEEGETYLLGFSDSDAS 303 (316)
Q Consensus 239 ~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 303 (316)
..+. +++++ .+++++.|+.+++|++.+++.... ..+.|++. +.....+|.|.+|++..+...
T Consensus 229 ~~~~-~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~ 300 (313)
T 3odt_A 229 YCIK-LLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWA 300 (313)
T ss_dssp EEEE-ECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGGCC
T ss_pred EEEE-EecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCcee
Confidence 6666 67776 689999999999999877643221 14666666 445777889999999876543
No 76
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.98 E-value=3.3e-30 Score=222.69 Aligned_cols=244 Identities=16% Similarity=0.247 Sum_probs=194.4
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
+|.|++||+.+.+....+. +|...|.+++| ++ .++++|+.||.|++||+.+++
T Consensus 152 dg~i~iwd~~~~~~~~~~~-----------~h~~~v~~l~~--~~-~~l~sg~~dg~i~vwd~~~~~------------- 204 (435)
T 1p22_A 152 DNTIKIWDKNTLECKRILT-----------GHTGSVLCLQY--DE-RVIITGSSDSTVRVWDVNTGE------------- 204 (435)
T ss_dssp SSCEEEEESSSCCEEEEEC-----------CCSSCEEEEEC--CS-SEEEEEETTSCEEEEESSSCC-------------
T ss_pred CCeEEEEeCCCCeEEEEEc-----------CCCCcEEEEEE--CC-CEEEEEcCCCeEEEEECCCCc-------------
Confidence 6899999998876644442 47889999999 45 799999999999999999886
Q ss_pred cccccccCCCcccEEEEEEccCCCeEEE-ecCCcEEEEEcCCCCCCCCccCCccccccCCCc---ceeeCCcCCceeeeE
Q 021160 82 FCPRHLIGKNNIHITGLAYSNTSELLIS-YNDELVYLFEKNMGLGPSPLSLSPEDLQKREEP---QVYSGHRNSQTVKGV 157 (316)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~~~~~~~l~s-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~~ 157 (316)
....+ .+|...|.+++|++ .++++ +.|+.|++||+.++ ... ..+.+|... |.++
T Consensus 205 -~~~~~-~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~----------------~~~~~~~~~~~~~~~--v~~~ 262 (435)
T 1p22_A 205 -MLNTL-IHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASP----------------TDITLRRVLVGHRAA--VNVV 262 (435)
T ss_dssp -EEEEE-CCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSS----------------SCCEEEEEECCCSSC--EEEE
T ss_pred -EEEEE-cCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCC----------------CCceeeeEecCCCCc--EEEE
Confidence 33333 67899999999974 46666 58999999999876 333 566778766 9999
Q ss_pred EEecCCCcEEEEeccCCeEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC-CCCCCCCcc
Q 021160 158 NFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD-FPPLPDNAE 236 (316)
Q Consensus 158 ~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~~ 236 (316)
+| +++++++|+.||.|++||+++++.+..+.+|...|.+++|+ ++++++++.|+.|++||++++. +..+.+|..
T Consensus 263 ~~---~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~ 337 (435)
T 1p22_A 263 DF---DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEE 337 (435)
T ss_dssp EE---ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECCCSS
T ss_pred Ee---CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCCCEEEEEeCCcC
Confidence 87 57899999999999999999999999999999999999994 6799999999999999999877 667777888
Q ss_pred cceeeeecCCCCceeEEecCCCeEEEEEecccCc--------cee---------EEeecccccccccCCCCeEEEEeccC
Q 021160 237 KIMKANKQGREDHSRITLTPDVIMHVLRLQRRQT--------LAY---------RERRYNAADFESDEEEGETYLLGFSD 299 (316)
Q Consensus 237 ~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~~--------~~~---------~~~~~~~~~~~~~~~~~~v~~~~~~~ 299 (316)
.+..+.+ ++.++++++.|+.|++||+..... ... .....++..+.++..+|.|.+|++.+
T Consensus 338 ~v~~~~~---~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~Dg~i~iwd~~~ 414 (435)
T 1p22_A 338 LVRCIRF---DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDFLN 414 (435)
T ss_dssp CEEEEEC---CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEECSSCEEECCSSSEEEEEC---
T ss_pred cEEEEEe---cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEeCCCEEEEEeCCCEEEEEECCC
Confidence 8766663 778999999999999999876541 111 01222566788889999999999987
Q ss_pred CCC
Q 021160 300 SDA 302 (316)
Q Consensus 300 ~~~ 302 (316)
+..
T Consensus 415 ~~~ 417 (435)
T 1p22_A 415 DPA 417 (435)
T ss_dssp ---
T ss_pred CCC
Confidence 654
No 77
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.98 E-value=7.7e-31 Score=226.69 Aligned_cols=241 Identities=7% Similarity=0.142 Sum_probs=184.2
Q ss_pred CCCccceEEEEECC-CCCcEEEEEecCCcEEEEeCcC---CcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCe
Q 021160 31 PMNSIRLNAIVIDP-RNPNYFAVGGSDEYARVYDIRK---CHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSEL 106 (316)
Q Consensus 31 ~gh~~~v~~~~~~~-~~~~~l~~g~~dg~v~~wd~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 106 (316)
.+|.+.|++++|+| ++ .+|++|+.||.|++||+.+ +... . ......|...|.+++|+|++.+
T Consensus 60 ~~h~~~V~~~~~s~~~~-~~l~s~s~dg~v~vwd~~~~~~~~~~------------~-~~~~~~h~~~v~~~~~~~~~~~ 125 (437)
T 3gre_A 60 ENEPNSITSSAVSPGET-PYLITGSDQGVIKIWNLKEIIVGEVY------------S-SSLTYDCSSTVTQITMIPNFDA 125 (437)
T ss_dssp TTTTSCEEEEEEECSSS-CEEEEEETTSEEEEEEHHHHHTTCCC------------S-CSEEEECSSCEEEEEECTTSSE
T ss_pred cCCCCceEEEEECCCCC-CEEEEecCCceEEEeECcccccCccc------------c-eeeeccCCCCEEEEEEeCCCCE
Confidence 35899999999999 87 8999999999999999986 3200 0 0111258899999999999998
Q ss_pred EEEe-cCCcEEEEEcC---CCCCCCCccCCccccccCCCcceeeCC--------c--CCceeeeEEE-ecCCCcEEEEec
Q 021160 107 LISY-NDELVYLFEKN---MGLGPSPLSLSPEDLQKREEPQVYSGH--------R--NSQTVKGVNF-FGPNDEYVMSGS 171 (316)
Q Consensus 107 l~s~-~d~~i~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~--~~~~i~~~~~-~~~~~~~l~~~~ 171 (316)
|+++ .|+.|++||++ .+ +....+.++ . ....+.++.+ .++++.++++++
T Consensus 126 l~s~s~dg~i~vwd~~~~~~~----------------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 189 (437)
T 3gre_A 126 FAVSSKDGQIIVLKVNHYQQE----------------SEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALT 189 (437)
T ss_dssp EEEEETTSEEEEEEEEEEEET----------------TEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEE
T ss_pred EEEEeCCCEEEEEEeccccCC----------------ceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEe
Confidence 8874 79999999995 33 222222211 1 1123666663 167899999999
Q ss_pred cCCeEEEEeccCCeeEEEeec--CccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC-CCCCC-CCcccceeeee---c
Q 021160 172 DCGHLFIWKKKGGKLVRLMVG--DRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD-FPPLP-DNAEKIMKANK---Q 244 (316)
Q Consensus 172 ~dg~v~~wd~~~~~~~~~~~~--~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~-~~~~~-~~~~~~~~~~~---~ 244 (316)
.|+.|++||+++++++..+.+ |...|.+++|+|++++|++++.||.|++||++.++ +..+. .|...+..+.+ +
T Consensus 190 ~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~ 269 (437)
T 3gre_A 190 NLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFY 269 (437)
T ss_dssp TTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTT
T ss_pred CCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEecccc
Confidence 999999999999999999988 88999999999999999999999999999999876 44432 46666666542 3
Q ss_pred CCCCceeEEecCCCeEEEEEecccCcceeE------------------------------------EeecccccccccCC
Q 021160 245 GREDHSRITLTPDVIMHVLRLQRRQTLAYR------------------------------------ERRYNAADFESDEE 288 (316)
Q Consensus 245 ~~~~~~~~s~~~d~~~~~w~~~~~~~~~~~------------------------------------~~~~~~~~~~~~~~ 288 (316)
++++.++++++.|+.|++||+.+++..... .+. +...+.++..
T Consensus 270 s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~ 348 (437)
T 3gre_A 270 GKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEA 348 (437)
T ss_dssp CTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGG
T ss_pred CCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCC
Confidence 457889999999999999999865422111 222 2356788888
Q ss_pred CCeEEEEeccCCCC
Q 021160 289 EGETYLLGFSDSDA 302 (316)
Q Consensus 289 ~~~v~~~~~~~~~~ 302 (316)
++.|.+|++..+..
T Consensus 349 d~~i~~wd~~~~~~ 362 (437)
T 3gre_A 349 TSSIVMFSLNELSS 362 (437)
T ss_dssp GTEEEEEETTCGGG
T ss_pred CCeEEEEECCCccc
Confidence 99999999987653
No 78
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.98 E-value=6.3e-30 Score=213.38 Aligned_cols=239 Identities=13% Similarity=0.157 Sum_probs=189.0
Q ss_pred CCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEe
Q 021160 31 PMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY 110 (316)
Q Consensus 31 ~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~ 110 (316)
.||.+.|++++|+|+++++|++|+.|++|++||+.+.+.. ...+. ....+|...|.+++|+|++++|+++
T Consensus 35 ~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~---------~~~~~-~~l~~h~~~V~~~~~s~dg~~l~s~ 104 (340)
T 4aow_A 35 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETN---------YGIPQ-RALRGHSHFVSDVVISSDGQFALSG 104 (340)
T ss_dssp CCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSC---------SEEEE-EEECCCSSCEEEEEECTTSSEEEEE
T ss_pred CCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcc---------cceee-EEEeCCCCCEEEEEECCCCCEEEEE
Confidence 4799999999999986689999999999999999876421 11112 2237899999999999999988885
Q ss_pred -cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCeeE-E
Q 021160 111 -NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLV-R 188 (316)
Q Consensus 111 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~-~ 188 (316)
.|+.|++|+.... ........+... +..+.+ ++++.++++++.|+.+++||+...... .
T Consensus 105 ~~d~~i~~~~~~~~----------------~~~~~~~~~~~~--~~~~~~-~~~~~~l~s~s~d~~~~~~d~~~~~~~~~ 165 (340)
T 4aow_A 105 SWDGTLRLWDLTTG----------------TTTRRFVGHTKD--VLSVAF-SSDNRQIVSGSRDKTIKLWNTLGVCKYTV 165 (340)
T ss_dssp ETTSEEEEEETTTT----------------EEEEEEECCSSC--EEEEEE-CTTSSCEEEEETTSCEEEECTTSCEEEEE
T ss_pred cccccceEEeeccc----------------ceeeeecCCCCc--eeEEEE-eecCccceeecCCCeEEEEEeCCCceEEE
Confidence 7999999999877 455555656544 777877 899999999999999999998866543 3
Q ss_pred EeecCccceEEEEEcCCC--CeEEEEeCCCcEEEecCCCCC-CCCCCCCcccceeeeecCCCCceeEEecCCCeEEEEEe
Q 021160 189 LMVGDRHVVNQLEPHPHI--PMFATCGIEKTVKLWAPMPTD-FPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRL 265 (316)
Q Consensus 189 ~~~~~~~~v~~~~~~p~~--~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~ 265 (316)
...+|...+..++|++++ .++++++.|+.|++||++..+ ...+.+|...+..+. ++++++++++++.|+.+++||+
T Consensus 166 ~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~-~s~~~~~l~s~s~Dg~i~iwd~ 244 (340)
T 4aow_A 166 QDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVT-VSPDGSLCASGGKDGQAMLWDL 244 (340)
T ss_dssp CSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEE-ECTTSSEEEEEETTCEEEEEET
T ss_pred EeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEE-ECCCCCEEEEEeCCCeEEEEEe
Confidence 456788999999999875 458899999999999999887 566777888876666 7889999999999999999998
Q ss_pred cccCcceeE---------EeecccccccccCCCCeEEEEeccCC
Q 021160 266 QRRQTLAYR---------ERRYNAADFESDEEEGETYLLGFSDS 300 (316)
Q Consensus 266 ~~~~~~~~~---------~~~~~~~~~~~~~~~~~v~~~~~~~~ 300 (316)
.+....... .+.|+...+. ...++.|.+|++..+
T Consensus 245 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~d~~i~iwd~~~~ 287 (340)
T 4aow_A 245 NEGKHLYTLDGGDIINALCFSPNRYWLC-AATGPSIKIWDLEGK 287 (340)
T ss_dssp TTTEEEEEEECSSCEEEEEECSSSSEEE-EEETTEEEEEETTTT
T ss_pred ccCceeeeecCCceEEeeecCCCCceee-ccCCCEEEEEECCCC
Confidence 875433221 3555544443 445778999988654
No 79
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.98 E-value=1.4e-30 Score=225.42 Aligned_cols=260 Identities=10% Similarity=0.120 Sum_probs=185.8
Q ss_pred CCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCc------------ccEEEEE
Q 021160 32 MNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNN------------IHITGLA 99 (316)
Q Consensus 32 gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~i~~~~ 99 (316)
.|.+.|++++|+|++ .+||+|+.||.|++||+.+++..... ....+.......+|. ..|.+++
T Consensus 26 ~~~~~V~~v~~s~~g-~~la~g~~dg~v~iw~~~~~~~~~~~----~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~ 100 (447)
T 3dw8_B 26 AEADIISTVEFNHSG-ELLATGDKGGRVVIFQQEQENKIQSH----SRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIR 100 (447)
T ss_dssp CGGGSEEEEEECSSS-SEEEEEETTSEEEEEEECC-----CC----CCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEE
T ss_pred cccCcEEEEEECCCC-CEEEEEcCCCeEEEEEecCCCCCCcc----cccceeEecccccccccccccccccccCceEEEE
Confidence 367899999999998 89999999999999999876521000 000011122225677 8899999
Q ss_pred EccCC--CeEEE-ecCCcEEEEEcCCCCCCC-----------------CccCCccccc------cCCCcce-eeCCcCCc
Q 021160 100 YSNTS--ELLIS-YNDELVYLFEKNMGLGPS-----------------PLSLSPEDLQ------KREEPQV-YSGHRNSQ 152 (316)
Q Consensus 100 ~~~~~--~~l~s-~~d~~i~iwd~~~~~~~~-----------------~~~~~~~~~~------~~~~~~~-~~~~~~~~ 152 (316)
|+|++ ..|++ +.|+.|++||+..+.... ...+....+. ...+... ..+|...
T Consensus 101 ~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~- 179 (447)
T 3dw8_B 101 WLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYH- 179 (447)
T ss_dssp ECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSC-
T ss_pred EcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcc-
Confidence 99998 56666 589999999997632100 0000000000 0000112 2567765
Q ss_pred eeeeEEEecCCCcEEEEeccCCeEEEEeccC-CeeEEE-------eecCccceEEEEEcCCC-CeEEEEeCCCcEEEecC
Q 021160 153 TVKGVNFFGPNDEYVMSGSDCGHLFIWKKKG-GKLVRL-------MVGDRHVVNQLEPHPHI-PMFATCGIEKTVKLWAP 223 (316)
Q Consensus 153 ~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~-~~~~~~-------~~~~~~~v~~~~~~p~~-~~l~s~~~d~~i~iwd~ 223 (316)
|.+++| +|++.+|++| .|+.|++||+++ ++.+.. +.+|...|.+++|+|++ ++|++++.|+.|++||+
T Consensus 180 -v~~~~~-~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~ 256 (447)
T 3dw8_B 180 -INSISI-NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDM 256 (447)
T ss_dssp -CCEEEE-CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEET
T ss_pred -eEEEEE-cCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEEC
Confidence 999999 9999999999 799999999984 444442 45789999999999998 89999999999999999
Q ss_pred CCCCC-----CCCCCCcc------------cceeeeecCCCCceeEEecCCCeEEEEEecc-cCcce-e-----------
Q 021160 224 MPTDF-----PPLPDNAE------------KIMKANKQGREDHSRITLTPDVIMHVLRLQR-RQTLA-Y----------- 273 (316)
Q Consensus 224 ~~~~~-----~~~~~~~~------------~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~-~~~~~-~----------- 273 (316)
+.+.. ..+..|.. .+..+. +++++.++++++. +.+++||+.. ++... +
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~ 334 (447)
T 3dw8_B 257 RASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVK-FSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLC 334 (447)
T ss_dssp TTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEE-ECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHH
T ss_pred cCCccccceeeEeccCCCccccccccccCceEEEEE-ECCCCCEEEEeeC-CeEEEEeCCCCccccceeecccccccccc
Confidence 88763 44555554 555554 8889999999998 9999999986 32211 1
Q ss_pred -------------EEeecccccccccCCCCeEEEEeccCCCC
Q 021160 274 -------------RERRYNAADFESDEEEGETYLLGFSDSDA 302 (316)
Q Consensus 274 -------------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 302 (316)
..+.|++..+.++..+|.|++|++..+..
T Consensus 335 ~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~ 376 (447)
T 3dw8_B 335 SLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRD 376 (447)
T ss_dssp HHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCE
T ss_pred ccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcc
Confidence 35778888899999999999999987653
No 80
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.97 E-value=3.2e-30 Score=249.38 Aligned_cols=253 Identities=15% Similarity=0.185 Sum_probs=209.8
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
+|.|++||+.+.+....+. +|...|.+++|+|++ .++++|+.|+.|++||+.+++
T Consensus 636 d~~i~vw~~~~~~~~~~~~-----------~h~~~v~~~~~s~~~-~~l~s~~~d~~v~vwd~~~~~------------- 690 (1249)
T 3sfz_A 636 DKTLQVFKAETGEKLLDIK-----------AHEDEVLCCAFSSDD-SYIATCSADKKVKIWDSATGK------------- 690 (1249)
T ss_dssp TSCEEEEETTTCCEEEEEC-----------CCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCC-------------
T ss_pred CCeEEEEECCCCCEEEEec-----------cCCCCEEEEEEecCC-CEEEEEeCCCeEEEEECCCCc-------------
Confidence 6899999998876544432 488999999999999 899999999999999999886
Q ss_pred cccccccCCCcccEEEEEEccCC--CeEEEe-cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEE
Q 021160 82 FCPRHLIGKNNIHITGLAYSNTS--ELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVN 158 (316)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~~~~~--~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 158 (316)
....+ .+|...|.+++|+|++ .+++++ .|+.|++||+.++ .....+.+|... |.+++
T Consensus 691 -~~~~~-~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~----------------~~~~~~~~h~~~--v~~~~ 750 (1249)
T 3sfz_A 691 -LVHTY-DEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQK----------------ECRNTMFGHTNS--VNHCR 750 (1249)
T ss_dssp -EEEEE-ECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSS----------------SEEEEECCCSSC--EEEEE
T ss_pred -eEEEE-cCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCc----------------chhheecCCCCC--EEEEE
Confidence 23333 6789999999999954 477774 7999999999988 677888899876 99999
Q ss_pred EecCCCcEEEEeccCCeEEEEeccCCeeEEEee-----------------------------------------------
Q 021160 159 FFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMV----------------------------------------------- 191 (316)
Q Consensus 159 ~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~----------------------------------------------- 191 (316)
| +|+++++++++.||.|++||+.+++....+.
T Consensus 751 ~-sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~ 829 (1249)
T 3sfz_A 751 F-SPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTS 829 (1249)
T ss_dssp E-CSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTC
T ss_pred E-ecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCC
Confidence 9 9999999999999999999988765443321
Q ss_pred --------cCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC-CCCCCCCcccceeeeecCCCCceeEEecCCCeEEE
Q 021160 192 --------GDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD-FPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHV 262 (316)
Q Consensus 192 --------~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~ 262 (316)
+|...|.+++|+|+++++++++.|+.|++|++.++. ...+.+|...+..+. +++++..+++++.|+.+++
T Consensus 830 ~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~-~spdg~~l~s~s~dg~v~v 908 (1249)
T 3sfz_A 830 GLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVM-FSPDGSSFLTASDDQTIRV 908 (1249)
T ss_dssp CEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEE-ECTTSSEEEEEETTSCEEE
T ss_pred CceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEE-ECCCCCEEEEEeCCCeEEE
Confidence 567789999999999999999999999999999876 666778888887766 7889999999999999999
Q ss_pred EEecccC-----------------------------------------------cceeEEeecccccccccCCCCeEEEE
Q 021160 263 LRLQRRQ-----------------------------------------------TLAYRERRYNAADFESDEEEGETYLL 295 (316)
Q Consensus 263 w~~~~~~-----------------------------------------------~~~~~~~~~~~~~~~~~~~~~~v~~~ 295 (316)
|++.+.. ......+.|++..++.+..+|.+++|
T Consensus 909 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~ 988 (1249)
T 3sfz_A 909 WETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKII 988 (1249)
T ss_dssp EEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEE
T ss_pred EEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEE
Confidence 9975420 11112567788888888889999999
Q ss_pred eccCCC
Q 021160 296 GFSDSD 301 (316)
Q Consensus 296 ~~~~~~ 301 (316)
+...+.
T Consensus 989 d~~~~~ 994 (1249)
T 3sfz_A 989 ELPNNR 994 (1249)
T ss_dssp ETTTTS
T ss_pred EcCCCc
Confidence 987654
No 81
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=7e-30 Score=220.28 Aligned_cols=233 Identities=13% Similarity=0.222 Sum_probs=181.0
Q ss_pred ceeeEEEEeeCCC--------cceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCC
Q 021160 2 VLFNMLFDLRSDS--------ATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPI 73 (316)
Q Consensus 2 ~g~v~vwd~~~~~--------~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~ 73 (316)
+|.|++||+.... ..+.... .+|...|.+++|+|++..+|++|+.||.|++|++..+....
T Consensus 150 dg~V~vwd~~~~~~~~~~~~~~~~~~~~---------~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~-- 218 (430)
T 2xyi_A 150 SSDVLVFDYTKHPSKPEPSGECQPDLRL---------RGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEH-- 218 (430)
T ss_dssp SSCEEEEEGGGSCSSCCTTCCCCCSEEE---------ECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGG--
T ss_pred CCcEEEEECCCcccccCccccCCCcEEe---------cCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCC--
Confidence 5889999998621 1112211 25888999999999984499999999999999998743100
Q ss_pred CCCCCceecccccccCCCcccEEEEEEcc-CCCeEEEe-cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCC
Q 021160 74 SSDTPVDTFCPRHLIGKNNIHITGLAYSN-TSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNS 151 (316)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (316)
..........+|...|.+++|+| ++.+|+++ .|+.|++||++... ..+....+..|...
T Consensus 219 ------~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~-------------~~~~~~~~~~~~~~ 279 (430)
T 2xyi_A 219 ------RVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNN-------------TSKPSHTVDAHTAE 279 (430)
T ss_dssp ------GEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSC-------------SSSCSEEEECCSSC
T ss_pred ------ceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCC-------------CCcceeEeecCCCC
Confidence 00011222367899999999999 45677774 79999999998751 01355667778866
Q ss_pred ceeeeEEEecCCCc-EEEEeccCCeEEEEeccC-CeeEEEeecCccceEEEEEcCCCC-eEEEEeCCCcEEEecCCCC--
Q 021160 152 QTVKGVNFFGPNDE-YVMSGSDCGHLFIWKKKG-GKLVRLMVGDRHVVNQLEPHPHIP-MFATCGIEKTVKLWAPMPT-- 226 (316)
Q Consensus 152 ~~i~~~~~~~~~~~-~l~~~~~dg~v~~wd~~~-~~~~~~~~~~~~~v~~~~~~p~~~-~l~s~~~d~~i~iwd~~~~-- 226 (316)
|.+++| +|++. ++++|+.||.|++||+++ ++++..+..|...|.+++|+|+++ +|++++.|+.|++||+...
T Consensus 280 --v~~i~~-~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~ 356 (430)
T 2xyi_A 280 --VNCLSF-NPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGE 356 (430)
T ss_dssp --EEEEEE-CSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTC
T ss_pred --eEEEEe-CCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCcc
Confidence 999999 88887 688999999999999997 567888999999999999999996 5899999999999999762
Q ss_pred ------------C-CCCCCCCcccceeeeecCCCCc-eeEEecCCCeEEEEEeccc
Q 021160 227 ------------D-FPPLPDNAEKIMKANKQGREDH-SRITLTPDVIMHVLRLQRR 268 (316)
Q Consensus 227 ------------~-~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~d~~~~~w~~~~~ 268 (316)
. +..+.+|...+..+. |++++. ++++++.|+.|++|++.+.
T Consensus 357 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~-~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 357 EQSTEDAEDGPPELLFIHGGHTAKISDFS-WNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp CCCHHHHHHCCTTEEEECCCCSSCEEEEE-ECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred ccCccccccCCcceEEEcCCCCCCceEEE-ECCCCCCEEEEEECCCCEEEeEcccc
Confidence 2 344556777777776 677666 8999999999999998765
No 82
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.97 E-value=8.6e-30 Score=214.66 Aligned_cols=223 Identities=11% Similarity=0.052 Sum_probs=181.9
Q ss_pred CCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEe
Q 021160 31 PMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY 110 (316)
Q Consensus 31 ~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~ 110 (316)
.+|...|++++|+|++ .+|++|+.||.|++||+.+++ ....+ .+|...|.+++|+|++++|+++
T Consensus 29 ~~h~~~v~~~~~s~~~-~~l~~~~~dg~i~vwd~~~~~--------------~~~~~-~~h~~~v~~~~~~~~~~~l~s~ 92 (369)
T 3zwl_B 29 TGHERPLTQVKYNKEG-DLLFSCSKDSSASVWYSLNGE--------------RLGTL-DGHTGTIWSIDVDCFTKYCVTG 92 (369)
T ss_dssp ECCSSCEEEEEECTTS-CEEEEEESSSCEEEEETTTCC--------------EEEEE-CCCSSCEEEEEECTTSSEEEEE
T ss_pred EEeeceEEEEEEcCCC-CEEEEEeCCCEEEEEeCCCch--------------hhhhh-hhcCCcEEEEEEcCCCCEEEEE
Confidence 3799999999999998 899999999999999999876 23333 6789999999999999988874
Q ss_pred -cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEeccC-----CeEEEEeccCC
Q 021160 111 -NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDC-----GHLFIWKKKGG 184 (316)
Q Consensus 111 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d-----g~v~~wd~~~~ 184 (316)
.|+.|++||+.++ +....+. +... +.+++| +|++.++++++.+ +.|++||+..+
T Consensus 93 ~~dg~i~iwd~~~~----------------~~~~~~~-~~~~--v~~~~~-~~~~~~l~~~~~~~~~~~g~i~~~d~~~~ 152 (369)
T 3zwl_B 93 SADYSIKLWDVSNG----------------QCVATWK-SPVP--VKRVEF-SPCGNYFLAILDNVMKNPGSINIYEIERD 152 (369)
T ss_dssp ETTTEEEEEETTTC----------------CEEEEEE-CSSC--EEEEEE-CTTSSEEEEEECCBTTBCCEEEEEEEEEC
T ss_pred eCCCeEEEEECCCC----------------cEEEEee-cCCC--eEEEEE-ccCCCEEEEecCCccCCCCEEEEEEecCC
Confidence 7999999999887 5666666 5544 999999 9999999999998 99999998765
Q ss_pred e-----------eEEEeecCcc--ceEEEEEcCCCCeEEEEeCCCcEEEecCCC-CC-CCCCCCCcccceeeeecCCCCc
Q 021160 185 K-----------LVRLMVGDRH--VVNQLEPHPHIPMFATCGIEKTVKLWAPMP-TD-FPPLPDNAEKIMKANKQGREDH 249 (316)
Q Consensus 185 ~-----------~~~~~~~~~~--~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~-~~-~~~~~~~~~~~~~~~~~~~~~~ 249 (316)
. .+..+..|.. .+.+++|+|++++|++++.|+.|++||++. .. ...+..|...+..+. +++++.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~-~~~~~~ 231 (369)
T 3zwl_B 153 SATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQ-FSPDLT 231 (369)
T ss_dssp TTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEE-ECTTSS
T ss_pred ccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEE-ECCCCC
Confidence 3 3445556665 899999999999999999999999999998 33 556666777776666 788999
Q ss_pred eeEEecCCCeEEEEEecccCcceeE---------EeecccccccccCCCC
Q 021160 250 SRITLTPDVIMHVLRLQRRQTLAYR---------ERRYNAADFESDEEEG 290 (316)
Q Consensus 250 ~~~s~~~d~~~~~w~~~~~~~~~~~---------~~~~~~~~~~~~~~~~ 290 (316)
++++++.|+.+++||+.+.+..... .+.|+...+.....++
T Consensus 232 ~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 281 (369)
T 3zwl_B 232 YFITSSRDTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGGQE 281 (369)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECCC
T ss_pred EEEEecCCceEEEEECCCCceeeeecCCCCceeEEecCCCceEEEeecCC
Confidence 9999999999999999876433221 4556666666555444
No 83
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.97 E-value=3.6e-30 Score=238.91 Aligned_cols=234 Identities=17% Similarity=0.244 Sum_probs=197.3
Q ss_pred CCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEe-
Q 021160 32 MNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY- 110 (316)
Q Consensus 32 gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~- 110 (316)
+|...|.+++|+|++ .+|++|+.||.|++||+.+++ ....+ .+|..+|.+++|+|++++|+++
T Consensus 11 ~h~~~v~~i~~sp~~-~~la~~~~~g~v~iwd~~~~~--------------~~~~~-~~~~~~v~~~~~s~~~~~l~~~~ 74 (814)
T 3mkq_A 11 NRSDRVKGIDFHPTE-PWVLTTLYSGRVEIWNYETQV--------------EVRSI-QVTETPVRAGKFIARKNWIIVGS 74 (814)
T ss_dssp EECSCEEEEEECSSS-SEEEEEETTSEEEEEETTTTE--------------EEEEE-ECCSSCEEEEEEEGGGTEEEEEE
T ss_pred cCCCceEEEEECCCC-CEEEEEeCCCEEEEEECCCCc--------------eEEEE-ecCCCcEEEEEEeCCCCEEEEEe
Confidence 478999999999999 899999999999999999876 23333 5789999999999999988885
Q ss_pred cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCC-eeEEE
Q 021160 111 NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGG-KLVRL 189 (316)
Q Consensus 111 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~-~~~~~ 189 (316)
.|+.|++||+.++ +....+.+|... |.+++| +|++.+|++++.||.|++||+.++ .....
T Consensus 75 ~dg~i~vw~~~~~----------------~~~~~~~~~~~~--v~~~~~-s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~ 135 (814)
T 3mkq_A 75 DDFRIRVFNYNTG----------------EKVVDFEAHPDY--IRSIAV-HPTKPYVLSGSDDLTVKLWNWENNWALEQT 135 (814)
T ss_dssp TTSEEEEEETTTC----------------CEEEEEECCSSC--EEEEEE-CSSSSEEEEEETTSEEEEEEGGGTSEEEEE
T ss_pred CCCeEEEEECCCC----------------cEEEEEecCCCC--EEEEEE-eCCCCEEEEEcCCCEEEEEECCCCceEEEE
Confidence 7999999999988 677888889866 999999 999999999999999999999987 77788
Q ss_pred eecCccceEEEEEcC-CCCeEEEEeCCCcEEEecCCCCC-CCCCCCCc-ccceeeeecCC--CCceeEEecCCCeEEEEE
Q 021160 190 MVGDRHVVNQLEPHP-HIPMFATCGIEKTVKLWAPMPTD-FPPLPDNA-EKIMKANKQGR--EDHSRITLTPDVIMHVLR 264 (316)
Q Consensus 190 ~~~~~~~v~~~~~~p-~~~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~-~~~~~~~~~~~--~~~~~~s~~~d~~~~~w~ 264 (316)
+.+|...|.+++|+| ++..|++++.|+.|++||+.... ...+..+. ..+.... +.+ ++.++++++.|+.+++|+
T Consensus 136 ~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~l~~~~~dg~i~~~d 214 (814)
T 3mkq_A 136 FEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVD-YYPLPDKPYMITASDDLTIKIWD 214 (814)
T ss_dssp EECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEE-ECCSTTCCEEEEECTTSEEEEEE
T ss_pred EcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEE-EEECCCCCEEEEEeCCCEEEEEE
Confidence 889999999999999 78899999999999999998765 33343333 4454444 565 888999999999999999
Q ss_pred ecccCcc---------e-eEEeecccccccccCCCCeEEEEeccCCC
Q 021160 265 LQRRQTL---------A-YRERRYNAADFESDEEEGETYLLGFSDSD 301 (316)
Q Consensus 265 ~~~~~~~---------~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 301 (316)
+.++... + ...+.|++..+.++..+|.|.+|+...+.
T Consensus 215 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~ 261 (814)
T 3mkq_A 215 YQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYK 261 (814)
T ss_dssp TTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCS
T ss_pred CCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 8764322 1 22677888888888889999999987654
No 84
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.97 E-value=5e-30 Score=230.56 Aligned_cols=257 Identities=11% Similarity=0.108 Sum_probs=202.1
Q ss_pred ceeeEEEEeeCC----CcceEEEeccccccccCCCCccc-eEEEEECC--CCCcEEEEEecCCcEEEEeCcCCcccCCCC
Q 021160 2 VLFNMLFDLRSD----SATRLFYCSSFSENSKQPMNSIR-LNAIVIDP--RNPNYFAVGGSDEYARVYDIRKCHWYSPIS 74 (316)
Q Consensus 2 ~g~v~vwd~~~~----~~~~~~~~~~~~~~~~~~gh~~~-v~~~~~~~--~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~ 74 (316)
.|.|+|||+.+. +....+ .+|... |++++|+| ++ ++|++|+.||.|++||+.+++..
T Consensus 38 ~~~v~v~~~~~~~~~~~~~~~~-----------~~h~~~~v~~~~~sp~~~~-~~l~s~~~dg~v~vw~~~~~~~~---- 101 (615)
T 1pgu_A 38 GKSAFVRCLDDGDSKVPPVVQF-----------TGHGSSVVTTVKFSPIKGS-QYLCSGDESGKVIVWGWTFDKES---- 101 (615)
T ss_dssp TTEEEEEECCSSCCSSCSEEEE-----------CTTTTSCEEEEEECSSTTC-CEEEEEETTSEEEEEEEEEEGGG----
T ss_pred CCeEEEEECCCCCCccccceEE-----------ecCCCceEEEEEECcCCCC-CEEEEecCCCEEEEEeCCCCccc----
Confidence 468999999876 433333 248889 99999999 98 89999999999999999755100
Q ss_pred CCCCceecccccccCCCcccEEEEEEccCCCeEEEe-cC----CcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCc
Q 021160 75 SDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-ND----ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHR 149 (316)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (316)
..........+ ..|...|.+++|+|++++|+++ .+ +.|++|| .+ +....+.+|.
T Consensus 102 --~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~----------------~~~~~~~~~~ 160 (615)
T 1pgu_A 102 --NSVEVNVKSEF-QVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SG----------------NSLGEVSGHS 160 (615)
T ss_dssp --TEEEEEEEEEE-ECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TC----------------CEEEECCSCS
T ss_pred --ccccccccchh-hcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CC----------------CcceeeecCC
Confidence 00000022222 5688999999999999988875 44 5788887 33 4667788888
Q ss_pred CCceeeeEEEecCCCc-EEEEeccCCeEEEEeccCCeeEEEeecCcc---ceEEEEEcCC-CCeEEEEeCCCcEEEecCC
Q 021160 150 NSQTVKGVNFFGPNDE-YVMSGSDCGHLFIWKKKGGKLVRLMVGDRH---VVNQLEPHPH-IPMFATCGIEKTVKLWAPM 224 (316)
Q Consensus 150 ~~~~i~~~~~~~~~~~-~l~~~~~dg~v~~wd~~~~~~~~~~~~~~~---~v~~~~~~p~-~~~l~s~~~d~~i~iwd~~ 224 (316)
.. |.+++| +|++. ++++++.|+.|++||+.+++.+..+.+|.. .|.+++|+|+ +++|++++.|+.|++||++
T Consensus 161 ~~--v~~~~~-~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~ 237 (615)
T 1pgu_A 161 QR--INACHL-KQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGK 237 (615)
T ss_dssp SC--EEEEEE-CSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETT
T ss_pred cc--EEEEEE-CCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECC
Confidence 66 999999 89987 899999999999999999999999999998 9999999999 9999999999999999998
Q ss_pred CCC-CCCC-C---CCcccceeeeecCCCCceeEEecCCCeEEEEEecccCcceeE-------------Eeeccccccccc
Q 021160 225 PTD-FPPL-P---DNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTLAYR-------------ERRYNAADFESD 286 (316)
Q Consensus 225 ~~~-~~~~-~---~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~~~~~~-------------~~~~~~~~~~~~ 286 (316)
+++ +..+ . .|...+..+. +. ++.++++++.|+.+++|++.+++..... ...+....+..+
T Consensus 238 ~~~~~~~~~~~~~~~~~~v~~~~-~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 315 (615)
T 1pgu_A 238 SGEFLKYIEDDQEPVQGGIFALS-WL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISL 315 (615)
T ss_dssp TCCEEEECCBTTBCCCSCEEEEE-ES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEE
T ss_pred CCCEeEEecccccccCCceEEEE-Ec-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEE
Confidence 887 4555 3 6778887777 55 8999999999999999999865432211 112256677777
Q ss_pred CCCCeEEEEeccCC
Q 021160 287 EEEGETYLLGFSDS 300 (316)
Q Consensus 287 ~~~~~v~~~~~~~~ 300 (316)
..++.+++|+...+
T Consensus 316 ~~~g~i~~~d~~~~ 329 (615)
T 1pgu_A 316 SLDGTLNFYELGHD 329 (615)
T ss_dssp ETTSCEEEEETTEE
T ss_pred ECCCCEEEEECCCC
Confidence 88888999987653
No 85
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.97 E-value=2.1e-30 Score=217.59 Aligned_cols=238 Identities=11% Similarity=0.091 Sum_probs=190.3
Q ss_pred CCccceEEEEECCCCCcEEEEEec---CCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccC---CC
Q 021160 32 MNSIRLNAIVIDPRNPNYFAVGGS---DEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNT---SE 105 (316)
Q Consensus 32 gh~~~v~~~~~~~~~~~~l~~g~~---dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~ 105 (316)
+|...|.+++|+|++..++++|+. |+.|++||+.+++. ......+|...|.+++|+|+ +.
T Consensus 16 ~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~--------------~~~~~~~~~~~v~~~~~~~~~~~~~ 81 (357)
T 3i2n_A 16 GFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDL--------------KLLREIEKAKPIKCGTFGATSLQQR 81 (357)
T ss_dssp ECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSE--------------EEEEEEEESSCEEEEECTTCCTTTC
T ss_pred CCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcc--------------cceeeecccCcEEEEEEcCCCCCCc
Confidence 489999999999998666677776 99999999998762 22222367889999999998 57
Q ss_pred eEEE-ecCCcEEEEEcCCCCCCCCccCCccccccCC-CcceeeCCcCCceeeeEEEe-----cCCCcEEEEeccCCeEEE
Q 021160 106 LLIS-YNDELVYLFEKNMGLGPSPLSLSPEDLQKRE-EPQVYSGHRNSQTVKGVNFF-----GPNDEYVMSGSDCGHLFI 178 (316)
Q Consensus 106 ~l~s-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~-----~~~~~~l~~~~~dg~v~~ 178 (316)
+|++ +.|+.|++||+.++ . ....+.+|... |.+++|. +|++.+|++++.||.|++
T Consensus 82 ~l~~~~~dg~i~iwd~~~~----------------~~~~~~~~~~~~~--v~~~~~~~~~~~s~~~~~l~~~~~d~~i~v 143 (357)
T 3i2n_A 82 YLATGDFGGNLHIWNLEAP----------------EMPVYSVKGHKEI--INAIDGIGGLGIGEGAPEIVTGSRDGTVKV 143 (357)
T ss_dssp CEEEEETTSCEEEECTTSC----------------SSCSEEECCCSSC--EEEEEEESGGGCC-CCCEEEEEETTSCEEE
T ss_pred eEEEecCCCeEEEEeCCCC----------------CccEEEEEecccc--eEEEeeccccccCCCccEEEEEeCCCeEEE
Confidence 7777 47999999999887 4 67788888876 9999652 688999999999999999
Q ss_pred EeccCCe-eEEEeecCcc----ceEEEE----EcCCCCeEEEEeCCCcEEEecCCCCCCCCCCCCcccceeeeecCC---
Q 021160 179 WKKKGGK-LVRLMVGDRH----VVNQLE----PHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGR--- 246 (316)
Q Consensus 179 wd~~~~~-~~~~~~~~~~----~v~~~~----~~p~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~--- 246 (316)
||+.+++ .+..+..|.+ .+.+++ |+|++++|++++.|+.|++||++..+......|...+..+. +++
T Consensus 144 wd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~-~~~~~~ 222 (357)
T 3i2n_A 144 WDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLE-FDRKDI 222 (357)
T ss_dssp ECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEE-ESCSSS
T ss_pred EeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEE-cCCCCC
Confidence 9999887 6777766554 788888 78999999999999999999999887544455666776666 666
Q ss_pred CCceeEEecCCCeEEEEEecccCcc--------------eeE-Eeecccc-cccccCCCCeEEEEeccCCCC
Q 021160 247 EDHSRITLTPDVIMHVLRLQRRQTL--------------AYR-ERRYNAA-DFESDEEEGETYLLGFSDSDA 302 (316)
Q Consensus 247 ~~~~~~s~~~d~~~~~w~~~~~~~~--------------~~~-~~~~~~~-~~~~~~~~~~v~~~~~~~~~~ 302 (316)
++..+++++.|+.+++|++.+++.. +.. .+.|+.. .+.++..+|.|.+|++..+..
T Consensus 223 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 294 (357)
T 3i2n_A 223 SMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQ 294 (357)
T ss_dssp SCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSC
T ss_pred CCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcc
Confidence 8899999999999999998764321 111 5777776 788889999999999986554
No 86
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.97 E-value=1.4e-29 Score=209.36 Aligned_cols=254 Identities=13% Similarity=0.182 Sum_probs=197.9
Q ss_pred CceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCce
Q 021160 1 MVLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVD 80 (316)
Q Consensus 1 ~~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~ 80 (316)
+++.|+|||+.+.+..+.+..+ +|...|++++|+|++ ++|++|+.||.|++||+++++
T Consensus 43 ~D~tV~iWd~~tg~~~~~~~~~---------~~~~~V~~v~~~~~~-~~l~sgs~Dg~v~iw~~~~~~------------ 100 (318)
T 4ggc_A 43 LDNSVYLWSASSGDILQLLQME---------QPGEYISSVAWIKEG-NYLAVGTSSAEVQLWDVQQQK------------ 100 (318)
T ss_dssp ETTEEEEEETTTCCEEEEEECC---------STTCCEEEEEECTTS-SEEEEEETTSEEEEEETTTTE------------
T ss_pred eCCEEEEEECCCCCEEEEEEec---------CCCCeEEEEEECCCC-CEEEEEECCCcEEEeecCCce------------
Confidence 3689999999998877776653 478899999999999 899999999999999999887
Q ss_pred ecccccccCCCcccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEE
Q 021160 81 TFCPRHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNF 159 (316)
Q Consensus 81 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 159 (316)
+.... .+|...+.++.+ ++.+++++ .++.+++|+..... .....+.+|... +..+.+
T Consensus 101 --~~~~~-~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~--~~~~~~ 158 (318)
T 4ggc_A 101 --RLRNM-TSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAE---------------HHVATLSGHSQE--VCGLRW 158 (318)
T ss_dssp --EEEEE-ECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSS---------------CEEEEEECCSSC--EEEEEE
T ss_pred --eEEEe-cCccceEEEeec--CCCEEEEEecCCceEeeecCCCc---------------eeEEEEcCccCc--eEEEEE
Confidence 33333 677887777655 45677775 79999999987762 355667888866 999998
Q ss_pred ecCCCcEEEEeccCCeEEEEeccCCee----EEEeecCccceEEEEEcCCCCeE---EEEeCCCcEEEecCCCCCCCCCC
Q 021160 160 FGPNDEYVMSGSDCGHLFIWKKKGGKL----VRLMVGDRHVVNQLEPHPHIPMF---ATCGIEKTVKLWAPMPTDFPPLP 232 (316)
Q Consensus 160 ~~~~~~~l~~~~~dg~v~~wd~~~~~~----~~~~~~~~~~v~~~~~~p~~~~l---~s~~~d~~i~iwd~~~~~~~~~~ 232 (316)
.+++.++++++.|+.|++||+.+++. ......|.+.|.+++++|.+..+ ++++.++.|++||..........
T Consensus 159 -~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~ 237 (318)
T 4ggc_A 159 -APDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAV 237 (318)
T ss_dssp -CTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEE
T ss_pred -cCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccc
Confidence 89999999999999999999987653 34555678899999999987653 46678899999999887744444
Q ss_pred CCcccceeeeecCCCCceeEE--ecCCCeEEEEEecccCcc---------eeE-EeecccccccccCCCCeEEEEeccCC
Q 021160 233 DNAEKIMKANKQGREDHSRIT--LTPDVIMHVLRLQRRQTL---------AYR-ERRYNAADFESDEEEGETYLLGFSDS 300 (316)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~s--~~~d~~~~~w~~~~~~~~---------~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~ 300 (316)
.+...+.... +.+.+..+++ ++.|+.|++||+.+++.. +.. .+.|++..+++++.|+.|.+|++.+.
T Consensus 238 ~~~~~v~~~~-~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 238 DAHSQVCSIL-WSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp ECSSCEEEEE-EETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred cceeeeeeee-ecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 4555555555 5555555544 457999999998765332 222 68889999999999999999998654
No 87
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=8e-30 Score=219.93 Aligned_cols=251 Identities=18% Similarity=0.211 Sum_probs=191.9
Q ss_pred CCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCC-eEEEe
Q 021160 32 MNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE-LLISY 110 (316)
Q Consensus 32 gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~s~ 110 (316)
+|.+.|++++|+|+++.+|++++.||.|++|++.+...... +...........+|...+.+++|+|++. +|+++
T Consensus 126 ~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~-----~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~ 200 (430)
T 2xyi_A 126 NHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPE-----PSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSA 200 (430)
T ss_dssp EESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCC-----TTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEE
T ss_pred cCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccC-----ccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEE
Confidence 48999999999998548999999999999999986321000 0000011122267899999999999998 88875
Q ss_pred -cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecC-CCcEEEEeccCCeEEEEeccCC---e
Q 021160 111 -NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGP-NDEYVMSGSDCGHLFIWKKKGG---K 185 (316)
Q Consensus 111 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~dg~v~~wd~~~~---~ 185 (316)
.||.|++||+...... .........+.+|... |.+++| +| ++.++++++.||.|++||++++ +
T Consensus 201 ~~dg~i~vwd~~~~~~~---------~~~~~~~~~~~~h~~~--v~~v~~-~p~~~~~l~s~~~dg~i~i~d~~~~~~~~ 268 (430)
T 2xyi_A 201 SDDHTICLWDINATPKE---------HRVIDAKNIFTGHTAV--VEDVAW-HLLHESLFGSVADDQKLMIWDTRNNNTSK 268 (430)
T ss_dssp CTTSCEEEEETTSCCBG---------GGEEECSEEECCCSSC--EEEEEE-CSSCTTEEEEEETTSEEEEEETTCSCSSS
T ss_pred eCCCeEEEEeCCCCCCC---------CceeccceeecCCCCC--EeeeEE-eCCCCCEEEEEeCCCeEEEEECCCCCCCc
Confidence 6999999999874100 0000124556678766 999999 77 7889999999999999999987 5
Q ss_pred eEEEeecCccceEEEEEcCCCC-eEEEEeCCCcEEEecCCCCC--CCCCCCCcccceeeeecCCCC-ceeEEecCCCeEE
Q 021160 186 LVRLMVGDRHVVNQLEPHPHIP-MFATCGIEKTVKLWAPMPTD--FPPLPDNAEKIMKANKQGRED-HSRITLTPDVIMH 261 (316)
Q Consensus 186 ~~~~~~~~~~~v~~~~~~p~~~-~l~s~~~d~~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~d~~~~ 261 (316)
.+..+..|...|++++|+|+++ +|++++.||.|++||++... +..+..|...+..+. |++++ .++++++.|+.|+
T Consensus 269 ~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~-~sp~~~~~l~s~~~d~~i~ 347 (430)
T 2xyi_A 269 PSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQ-WSPHNETILASSGTDRRLH 347 (430)
T ss_dssp CSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEE-ECSSCTTEEEEEETTSCCE
T ss_pred ceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEE-ECCCCCCEEEEEeCCCcEE
Confidence 7778889999999999999987 58899999999999998743 566667888887777 66655 5799999999999
Q ss_pred EEEecccC-----------------------ccee-EEeecccc-cccccCCCCeEEEEeccCC
Q 021160 262 VLRLQRRQ-----------------------TLAY-RERRYNAA-DFESDEEEGETYLLGFSDS 300 (316)
Q Consensus 262 ~w~~~~~~-----------------------~~~~-~~~~~~~~-~~~~~~~~~~v~~~~~~~~ 300 (316)
+|++.... ..+. ..+.|+.. .+.+...+|.|.+|++...
T Consensus 348 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 348 VWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp EEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred EEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 99998621 1111 25677776 7788889999999998754
No 88
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.8e-30 Score=224.37 Aligned_cols=235 Identities=13% Similarity=0.145 Sum_probs=175.6
Q ss_pred ceeeEEEEeeC---CCcc-eEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCc---CCcccCCCC
Q 021160 2 VLFNMLFDLRS---DSAT-RLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIR---KCHWYSPIS 74 (316)
Q Consensus 2 ~g~v~vwd~~~---~~~~-~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~---~~~~~~~~~ 74 (316)
+|.|+|||+.+ .... ..... +|...|.+++|+|++ .+|++|+.||.|++||+. +++......
T Consensus 85 dg~v~vwd~~~~~~~~~~~~~~~~----------~h~~~v~~~~~~~~~-~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~ 153 (437)
T 3gre_A 85 QGVIKIWNLKEIIVGEVYSSSLTY----------DCSSTVTQITMIPNF-DAFAVSSKDGQIIVLKVNHYQQESEVKFLN 153 (437)
T ss_dssp TSEEEEEEHHHHHTTCCCSCSEEE----------ECSSCEEEEEECTTS-SEEEEEETTSEEEEEEEEEEEETTEEEEEE
T ss_pred CceEEEeECcccccCcccceeeec----------cCCCCEEEEEEeCCC-CEEEEEeCCCEEEEEEeccccCCceeeccc
Confidence 68999999977 3311 12222 278899999999988 899999999999999995 443211100
Q ss_pred CCCCceecccccccCCCcccEEEEE--EccCCCeEEEe-cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeC--Cc
Q 021160 75 SDTPVDTFCPRHLIGKNNIHITGLA--YSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSG--HR 149 (316)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 149 (316)
. ..+..+.... .++...+.++. +++++.+++++ .|+.|++||++++ +.+..+.+ |.
T Consensus 154 ~-~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~----------------~~~~~~~~~~h~ 214 (437)
T 3gre_A 154 C-ECIRKINLKN--FGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTL----------------ERLQIIENSPRH 214 (437)
T ss_dssp E-EEEEEEEGGG--GSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTC----------------CEEEEEECCGGG
T ss_pred c-ceeEEEEccC--cccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC----------------eeeEEEccCCCC
Confidence 0 0111111000 11556777777 56788877774 7999999999987 67788887 56
Q ss_pred CCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCeeEEEee-cCccceEEEEEc----CCCCeEEEEeCCCcEEEecCC
Q 021160 150 NSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMV-GDRHVVNQLEPH----PHIPMFATCGIEKTVKLWAPM 224 (316)
Q Consensus 150 ~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~-~~~~~v~~~~~~----p~~~~l~s~~~d~~i~iwd~~ 224 (316)
.. |.+++| +|++.+|++|+.||.|++||+++++++..+. .|...|.+++|+ |++.+|++++.|+.|++||++
T Consensus 215 ~~--v~~~~~-s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~ 291 (437)
T 3gre_A 215 GA--VSSICI-DEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFV 291 (437)
T ss_dssp CC--EEEEEE-CTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETT
T ss_pred Cc--eEEEEE-CCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcC
Confidence 55 999999 9999999999999999999999999998886 788899999655 467789999999999999998
Q ss_pred CCC-CCCC------------------------CC--CcccceeeeecCCCCceeEEecCCCeEEEEEecccCcc
Q 021160 225 PTD-FPPL------------------------PD--NAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTL 271 (316)
Q Consensus 225 ~~~-~~~~------------------------~~--~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~~~ 271 (316)
+++ ...+ .+ |...+..+. +. ++.++++++.|+.|++|++.+++..
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~-~~-~~~~l~s~~~d~~i~~wd~~~~~~~ 363 (437)
T 3gre_A 292 KGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTIS-VS-NDKILLTDEATSSIVMFSLNELSSS 363 (437)
T ss_dssp TTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEE-EE-TTEEEEEEGGGTEEEEEETTCGGGC
T ss_pred CCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEE-EC-CceEEEecCCCCeEEEEECCCcccc
Confidence 654 2222 12 455555555 44 6689999999999999999876543
No 89
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.97 E-value=7.6e-30 Score=219.04 Aligned_cols=231 Identities=12% Similarity=0.138 Sum_probs=185.4
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCC---
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTP--- 78 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~--- 78 (316)
+|.|++|| .+.+....+. +|...|.+++|+|++ .+|++++.|+.|++||+.+++....+.....
T Consensus 129 dg~i~i~~-~~~~~~~~~~-----------~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 195 (425)
T 1r5m_A 129 NGELRLWN-KTGALLNVLN-----------FHRAPIVSVKWNKDG-THIISMDVENVTILWNVISGTVMQHFELKETGGS 195 (425)
T ss_dssp TSCEEEEE-TTSCEEEEEC-----------CCCSCEEEEEECTTS-SEEEEEETTCCEEEEETTTTEEEEEECCC-----
T ss_pred CCeEEEEe-CCCCeeeecc-----------CCCccEEEEEECCCC-CEEEEEecCCeEEEEECCCCcEEEEeeccccCcc
Confidence 57899999 3333322221 378899999999998 8999999999999999988775443321111
Q ss_pred -------------ceec-------------------------ccccccCCCcccEEEEEEccCCCeEEEe-cCCcEEEEE
Q 021160 79 -------------VDTF-------------------------CPRHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFE 119 (316)
Q Consensus 79 -------------~~~~-------------------------~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd 119 (316)
+... ........|...|.+++|+|++++|+++ .|+.|++||
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d 275 (425)
T 1r5m_A 196 SINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWH 275 (425)
T ss_dssp ----------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEC
T ss_pred ceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEE
Confidence 1000 0111224688899999999999988875 799999999
Q ss_pred cCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCeeEEEeecCccceEE
Q 021160 120 KNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQ 199 (316)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~ 199 (316)
++.+ +....+.+|... +.+++| +|++ ++++++.|+.|++||+.+++.+..+..|...|.+
T Consensus 276 ~~~~----------------~~~~~~~~~~~~--i~~~~~-~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~ 335 (425)
T 1r5m_A 276 GGNG----------------NSQNCFYGHSQS--IVSASW-VGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFA 335 (425)
T ss_dssp SSSB----------------SCSEEECCCSSC--EEEEEE-ETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEE
T ss_pred CCCC----------------ccceEecCCCcc--EEEEEE-CCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEE
Confidence 9887 677888888866 999999 8888 9999999999999999999999999999999999
Q ss_pred EEEcCCCCeEEEEeCCCcEEEecCCCCC---------------------CCCCCCCcc--cceeeeecCCCCceeEEecC
Q 021160 200 LEPHPHIPMFATCGIEKTVKLWAPMPTD---------------------FPPLPDNAE--KIMKANKQGREDHSRITLTP 256 (316)
Q Consensus 200 ~~~~p~~~~l~s~~~d~~i~iwd~~~~~---------------------~~~~~~~~~--~~~~~~~~~~~~~~~~s~~~ 256 (316)
++|+|++++|++++.|+.|++||+.... +..+..|.. .+..+. ++++++++++++.
T Consensus 336 ~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~s~~~~~l~~~~~ 414 (425)
T 1r5m_A 336 GRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLS-WNCAGNKISVAYS 414 (425)
T ss_dssp EEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEE-ECTTSSEEEEEES
T ss_pred EEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEE-ccCCCceEEEEec
Confidence 9999999999999999999999997544 344556655 565555 8889999999999
Q ss_pred CCeEEEEEec
Q 021160 257 DVIMHVLRLQ 266 (316)
Q Consensus 257 d~~~~~w~~~ 266 (316)
|+.+++|++.
T Consensus 415 dg~i~iw~~~ 424 (425)
T 1r5m_A 415 LQEGSVVAIP 424 (425)
T ss_dssp SSCCEEEECC
T ss_pred CceEEEEeec
Confidence 9999999975
No 90
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.97 E-value=7.5e-30 Score=236.78 Aligned_cols=222 Identities=17% Similarity=0.174 Sum_probs=188.7
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
+|.|+|||+.+.+....+.. |..+|.+++|+|++ .+|++|+.||.|++||+.+++
T Consensus 34 ~g~v~iwd~~~~~~~~~~~~-----------~~~~v~~~~~s~~~-~~l~~~~~dg~i~vw~~~~~~------------- 88 (814)
T 3mkq_A 34 SGRVEIWNYETQVEVRSIQV-----------TETPVRAGKFIARK-NWIIVGSDDFRIRVFNYNTGE------------- 88 (814)
T ss_dssp TSEEEEEETTTTEEEEEEEC-----------CSSCEEEEEEEGGG-TEEEEEETTSEEEEEETTTCC-------------
T ss_pred CCEEEEEECCCCceEEEEec-----------CCCcEEEEEEeCCC-CEEEEEeCCCeEEEEECCCCc-------------
Confidence 68999999988765554443 78899999999999 899999999999999999886
Q ss_pred cccccccCCCcccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEe
Q 021160 82 FCPRHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFF 160 (316)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 160 (316)
....+ .+|...|.+++|+|++.+|+++ .|+.|++||+.++. .....+.+|... +.+++|
T Consensus 89 -~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~---------------~~~~~~~~~~~~--v~~~~~- 148 (814)
T 3mkq_A 89 -KVVDF-EAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW---------------ALEQTFEGHEHF--VMCVAF- 148 (814)
T ss_dssp -EEEEE-ECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTS---------------EEEEEEECCSSC--EEEEEE-
T ss_pred -EEEEE-ecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCc---------------eEEEEEcCCCCc--EEEEEE-
Confidence 23333 6789999999999999988875 79999999998652 355677788866 999999
Q ss_pred cC-CCcEEEEeccCCeEEEEeccCCeeEEEeecCc-cceEEEEEcC--CCCeEEEEeCCCcEEEecCCCCC-CCCCCCCc
Q 021160 161 GP-NDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR-HVVNQLEPHP--HIPMFATCGIEKTVKLWAPMPTD-FPPLPDNA 235 (316)
Q Consensus 161 ~~-~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~~-~~v~~~~~~p--~~~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~ 235 (316)
+| ++..+++++.||.|++||+.+++....+..+. ..+..++|+| ++++|++++.|+.|++||+..+. ...+.+|.
T Consensus 149 ~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~ 228 (814)
T 3mkq_A 149 NPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHM 228 (814)
T ss_dssp ETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCS
T ss_pred EcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCC
Confidence 78 88999999999999999999888877776654 8899999999 99999999999999999998876 55666677
Q ss_pred ccceeeeecCCCCceeEEecCCCeEEEEEecccC
Q 021160 236 EKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQ 269 (316)
Q Consensus 236 ~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~ 269 (316)
..+..+. +++++.++++++.|+.+++|++.++.
T Consensus 229 ~~v~~~~-~~~~~~~l~~~~~dg~v~vwd~~~~~ 261 (814)
T 3mkq_A 229 SNVSFAV-FHPTLPIIISGSEDGTLKIWNSSTYK 261 (814)
T ss_dssp SCEEEEE-ECSSSSEEEEEETTSCEEEEETTTCS
T ss_pred CCEEEEE-EcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 7775555 88899999999999999999988754
No 91
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3e-30 Score=237.10 Aligned_cols=236 Identities=14% Similarity=0.154 Sum_probs=194.6
Q ss_pred CCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccC--CCeEE
Q 021160 31 PMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNT--SELLI 108 (316)
Q Consensus 31 ~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~ 108 (316)
.||.+.|++++|+|++ .+|++|+.||.|++||+..+... .... ..+|...|.+++|+|+ +++|+
T Consensus 6 ~gH~~~V~~l~~s~dg-~~latg~~dg~I~vwd~~~~~~~------------~~~~-l~~h~~~V~~l~~s~~~~~~~l~ 71 (753)
T 3jro_A 6 NAHNELIHDAVLDYYG-KRLATCSSDKTIKIFEVEGETHK------------LIDT-LTGHEGPVWRVDWAHPKFGTILA 71 (753)
T ss_dssp --CCCCEEEECCCSSS-CCEEEEETTTEEEEEEEETTEEE------------EEEE-ECCCSSCEEEEEECCTTSCSEEE
T ss_pred ccCcceeEEEEECCCC-CeEEEEECCCcEEEEecCCCCCc------------ccee-ccCCcCceEEEEecCCCCCCEEE
Confidence 4799999999999999 89999999999999999844310 2222 2789999999999988 88888
Q ss_pred Ee-cCCcEEEEEcCCCCCCCCccCCccccccCC--CcceeeCCcCCceeeeEEEecCC--CcEEEEeccCCeEEEEeccC
Q 021160 109 SY-NDELVYLFEKNMGLGPSPLSLSPEDLQKRE--EPQVYSGHRNSQTVKGVNFFGPN--DEYVMSGSDCGHLFIWKKKG 183 (316)
Q Consensus 109 s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~--~~~l~~~~~dg~v~~wd~~~ 183 (316)
++ .||.|++||+.++ . ....+.+|... |.+++| +|+ +.++++|+.||.|++||+.+
T Consensus 72 s~s~Dg~I~vwd~~~~----------------~~~~~~~~~~h~~~--V~~v~~-sp~~~~~~l~sgs~dg~I~vwdl~~ 132 (753)
T 3jro_A 72 SCSYDGKVLIWKEENG----------------RWSQIAVHAVHSAS--VNSVQW-APHEYGPLLLVASSDGKVSVVEFKE 132 (753)
T ss_dssp EEETTSCEEEEEEETT----------------EEEEEEEECCCSSC--EEEEEE-CCGGGCSEEEEEETTSEEEEEECCS
T ss_pred EEeCCCeEEEEECCCC----------------cccccccccCCCCC--eEEEEE-CCCCCCCEEEEEeCCCcEEEEEeec
Confidence 74 7999999999876 3 55667778766 999999 898 99999999999999999987
Q ss_pred C--eeEEEeecCccceEEEEEcC-------------CCCeEEEEeCCCcEEEecCCCCC-----CCCCCCCcccceeeee
Q 021160 184 G--KLVRLMVGDRHVVNQLEPHP-------------HIPMFATCGIEKTVKLWAPMPTD-----FPPLPDNAEKIMKANK 243 (316)
Q Consensus 184 ~--~~~~~~~~~~~~v~~~~~~p-------------~~~~l~s~~~d~~i~iwd~~~~~-----~~~~~~~~~~~~~~~~ 243 (316)
+ .....+.+|...|.+++|+| +++++++++.||.|++||++.+. ...+.+|...+..+.
T Consensus 133 ~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~- 211 (753)
T 3jro_A 133 NGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVA- 211 (753)
T ss_dssp SSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEE-
T ss_pred CCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEE-
Confidence 7 33456678999999999999 58899999999999999998763 345667888887776
Q ss_pred cCCC---CceeEEecCCCeEEEEEecccCc--------------ce-eEEeecccccccccCCCCeEEEEeccCC
Q 021160 244 QGRE---DHSRITLTPDVIMHVLRLQRRQT--------------LA-YRERRYNAADFESDEEEGETYLLGFSDS 300 (316)
Q Consensus 244 ~~~~---~~~~~s~~~d~~~~~w~~~~~~~--------------~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 300 (316)
++++ +.++++++.|+.+++|++..+.. .+ ...+.|++..+.++..+|.|++|++..+
T Consensus 212 ~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 212 WSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 286 (753)
T ss_dssp ECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSS
T ss_pred eccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCC
Confidence 6776 89999999999999999987521 11 1267888889999999999999998854
No 92
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.97 E-value=3.4e-29 Score=216.96 Aligned_cols=243 Identities=13% Similarity=0.205 Sum_probs=198.7
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
+|.|++||+.+.+....+ .+|...|.+++|+ + .++++|+.||.|++||+.+++
T Consensus 138 dg~i~vwd~~~~~~~~~~-----------~~h~~~v~~~~~~--~-~~l~s~~~dg~i~vwd~~~~~------------- 190 (445)
T 2ovr_B 138 DNTLKVWSAVTGKCLRTL-----------VGHTGGVWSSQMR--D-NIIISGSTDRTLKVWNAETGE------------- 190 (445)
T ss_dssp TSCEEEEETTTCCEEEEC-----------CCCSSCEEEEEEE--T-TEEEEEETTSCEEEEETTTTE-------------
T ss_pred CCcEEEEECCCCcEEEEE-----------cCCCCCEEEEEec--C-CEEEEEeCCCeEEEEECCcCc-------------
Confidence 689999999877654332 2488999999998 3 699999999999999999886
Q ss_pred cccccccCCCcccEEEEEEccCCCeEEE-ecCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEe
Q 021160 82 FCPRHLIGKNNIHITGLAYSNTSELLIS-YNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFF 160 (316)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~~~~~~~l~s-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 160 (316)
+...+ .+|...|.+++|+ +..+++ +.|+.|++||+.++ +....+.+|... +.+++|
T Consensus 191 -~~~~~-~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~----------------~~~~~~~~~~~~--v~~~~~- 247 (445)
T 2ovr_B 191 -CIHTL-YGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETG----------------QCLHVLMGHVAA--VRCVQY- 247 (445)
T ss_dssp -EEEEE-CCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSC----------------CEEEEEECCSSC--EEEEEE-
T ss_pred -EEEEE-CCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCC----------------cEEEEEcCCccc--EEEEEE-
Confidence 33333 6889999999996 455666 57999999999987 677888888866 999987
Q ss_pred cCCCcEEEEeccCCeEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC-CCCCCCCcccce
Q 021160 161 GPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD-FPPLPDNAEKIM 239 (316)
Q Consensus 161 ~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~~~~~ 239 (316)
++.++++|+.||.|++||+++++.+..+.+|...|.+++| ++.++++++.|+.|++||+++++ +..+.+|...+.
T Consensus 248 --~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~ 323 (445)
T 2ovr_B 248 --DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTS 323 (445)
T ss_dssp --CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEE
T ss_pred --CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEE
Confidence 6889999999999999999999999999999999999999 78899999999999999999887 556666766665
Q ss_pred eeeecCCCCceeEEecCCCeEEEEEecccCcceeE-----------EeecccccccccCCCCeEEEEeccCCC
Q 021160 240 KANKQGREDHSRITLTPDVIMHVLRLQRRQTLAYR-----------ERRYNAADFESDEEEGETYLLGFSDSD 301 (316)
Q Consensus 240 ~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~v~~~~~~~~~ 301 (316)
... .++.++++++.|+.+++||+.+++..... .....+..+.++..+|.|.+|++..+.
T Consensus 324 ~~~---~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 393 (445)
T 2ovr_B 324 GME---LKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGE 393 (445)
T ss_dssp EEE---EETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEETTSEEEEEETTTCC
T ss_pred EEE---EeCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEECCCEEEEEeCCCeEEEEECCCCc
Confidence 444 35679999999999999998765432211 223345678888899999999998765
No 93
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.6e-29 Score=232.27 Aligned_cols=226 Identities=12% Similarity=0.147 Sum_probs=182.8
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCC--CCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCc
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPR--NPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPV 79 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~--~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~ 79 (316)
+|.|+|||+........... .+|.++|++++|+|+ + ++|++|+.||.|++||+.+++.
T Consensus 30 dg~I~vwd~~~~~~~~~~~l---------~~h~~~V~~l~~s~~~~~-~~l~s~s~Dg~I~vwd~~~~~~---------- 89 (753)
T 3jro_A 30 DKTIKIFEVEGETHKLIDTL---------TGHEGPVWRVDWAHPKFG-TILASCSYDGKVLIWKEENGRW---------- 89 (753)
T ss_dssp TTEEEEEEEETTEEEEEEEE---------CCCSSCEEEEEECCTTSC-SEEEEEETTSCEEEEEEETTEE----------
T ss_pred CCcEEEEecCCCCCccceec---------cCCcCceEEEEecCCCCC-CEEEEEeCCCeEEEEECCCCcc----------
Confidence 68999999985433222222 258999999999987 6 8999999999999999997752
Q ss_pred eecccccccCCCcccEEEEEEccC--CCeEEE-ecCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeee
Q 021160 80 DTFCPRHLIGKNNIHITGLAYSNT--SELLIS-YNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKG 156 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~s-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 156 (316)
.......+|...|.+++|+|+ +.++++ +.|+.|++||++.+.. .....+.+|... |.+
T Consensus 90 ---~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~--------------~~~~~~~~~~~~--v~~ 150 (753)
T 3jro_A 90 ---SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT--------------TSPIIIDAHAIG--VNS 150 (753)
T ss_dssp ---EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSC--------------CCCEEEECCSSC--EEE
T ss_pred ---cccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCC--------------cceeEeecCCCc--eEE
Confidence 111222678999999999999 887777 4799999999987620 234456677765 999
Q ss_pred EEEecC-------------CCcEEEEeccCCeEEEEeccCC----eeEEEeecCccceEEEEEcCC---CCeEEEEeCCC
Q 021160 157 VNFFGP-------------NDEYVMSGSDCGHLFIWKKKGG----KLVRLMVGDRHVVNQLEPHPH---IPMFATCGIEK 216 (316)
Q Consensus 157 ~~~~~~-------------~~~~l~~~~~dg~v~~wd~~~~----~~~~~~~~~~~~v~~~~~~p~---~~~l~s~~~d~ 216 (316)
++| +| ++.++++|+.||.|++||++++ .....+.+|...|.+++|+|+ +++|++++.||
T Consensus 151 l~~-~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg 229 (753)
T 3jro_A 151 ASW-APATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDR 229 (753)
T ss_dssp EEE-CCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSS
T ss_pred EEe-cCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCC
Confidence 999 77 5899999999999999999877 566778899999999999999 89999999999
Q ss_pred cEEEecCCCCC------CCCCCCCcccceeeeecCCCCceeEEecCCCeEEEEEeccc
Q 021160 217 TVKLWAPMPTD------FPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR 268 (316)
Q Consensus 217 ~i~iwd~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~ 268 (316)
.|++||+..+. ......|...+..+. +++++.++++++.||.|++|++...
T Consensus 230 ~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~-~spdg~~l~s~s~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 230 TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRAS-WSLSGNVLALSGGDNKVTLWKENLE 286 (753)
T ss_dssp CEEEEEESSSSSCCBCCBSSSSCCSSCCCCEE-ECTTTCCEEEECSSSCEECCBCCSS
T ss_pred EEEEecCCCCCCcceeEEeccCCCCCceEEEE-EcCCCCEEEEEcCCCEEEEEecCCC
Confidence 99999998763 333344666665555 7889999999999999999998854
No 94
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.97 E-value=4.4e-29 Score=216.29 Aligned_cols=242 Identities=16% Similarity=0.267 Sum_probs=196.6
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
+|.|++||+.+.+....+. +|...|.+++|++ ..+++|+.||.|++||+++++
T Consensus 178 dg~i~vwd~~~~~~~~~~~-----------~h~~~v~~~~~~~---~~l~s~s~dg~i~~wd~~~~~------------- 230 (445)
T 2ovr_B 178 DRTLKVWNAETGECIHTLY-----------GHTSTVRCMHLHE---KRVVSGSRDATLRVWDIETGQ------------- 230 (445)
T ss_dssp TSCEEEEETTTTEEEEEEC-----------CCSSCEEEEEEET---TEEEEEETTSEEEEEESSSCC-------------
T ss_pred CCeEEEEECCcCcEEEEEC-----------CCCCcEEEEEecC---CEEEEEeCCCEEEEEECCCCc-------------
Confidence 6899999998876544332 4788999999964 689999999999999999876
Q ss_pred cccccccCCCcccEEEEEEccCCCeEEE-ecCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEe
Q 021160 82 FCPRHLIGKNNIHITGLAYSNTSELLIS-YNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFF 160 (316)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~~~~~~~l~s-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 160 (316)
....+ .+|...|.+++| ++.++++ +.|+.|++||++++ +....+.+|... +.+++|
T Consensus 231 -~~~~~-~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~----------------~~~~~~~~~~~~--v~~~~~- 287 (445)
T 2ovr_B 231 -CLHVL-MGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETE----------------TCLHTLQGHTNR--VYSLQF- 287 (445)
T ss_dssp -EEEEE-ECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGT----------------EEEEEECCCSSC--EEEEEE-
T ss_pred -EEEEE-cCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCC----------------cEeEEecCCCCc--eEEEEE-
Confidence 22233 678899999999 5666666 57999999999887 677888888866 999987
Q ss_pred cCCCcEEEEeccCCeEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC-CCCCCC---Ccc
Q 021160 161 GPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD-FPPLPD---NAE 236 (316)
Q Consensus 161 ~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~-~~~~~~---~~~ 236 (316)
++.++++++.|+.|++||+++++.+..+.+|...+.++.++ ++++++++.||.|++||+++++ +..+.. |..
T Consensus 288 --~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 363 (445)
T 2ovr_B 288 --DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQS 363 (445)
T ss_dssp --CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSS
T ss_pred --CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEe--CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCC
Confidence 68899999999999999999999999999999999888875 5699999999999999998876 444443 666
Q ss_pred cceeeeecCCCCceeEEecCCCeEEEEEecccCcce--------------eE-EeecccccccccCCCCe----EEEEec
Q 021160 237 KIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTLA--------------YR-ERRYNAADFESDEEEGE----TYLLGF 297 (316)
Q Consensus 237 ~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~~~~--------------~~-~~~~~~~~~~~~~~~~~----v~~~~~ 297 (316)
.+..+.+ ++.++++++.|+.|++|++.+++... .. .+.|++..++.+..+|. ++++|+
T Consensus 364 ~v~~~~~---~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df 440 (445)
T 2ovr_B 364 AVTCLQF---NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDF 440 (445)
T ss_dssp CEEEEEE---CSSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEEC
T ss_pred CEEEEEE---CCCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEEC
Confidence 6665553 46799999999999999988764322 11 57778888888877776 999998
Q ss_pred cCC
Q 021160 298 SDS 300 (316)
Q Consensus 298 ~~~ 300 (316)
+..
T Consensus 441 ~~~ 443 (445)
T 2ovr_B 441 DVD 443 (445)
T ss_dssp CCC
T ss_pred CCC
Confidence 754
No 95
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.97 E-value=7.9e-30 Score=218.02 Aligned_cols=221 Identities=15% Similarity=0.226 Sum_probs=179.3
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
+|.|++||+.+.+....+. +|...|.+++|++ .++++|+.||.|++||++...
T Consensus 155 dg~i~iwd~~~~~~~~~~~-----------~~~~~v~~~~~~~---~~l~~~~~dg~i~i~d~~~~~------------- 207 (401)
T 4aez_A 155 NGLVDIYDVESQTKLRTMA-----------GHQARVGCLSWNR---HVLSSGSRSGAIHHHDVRIAN------------- 207 (401)
T ss_dssp TSCEEEEETTTCCEEEEEC-----------CCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSS-------------
T ss_pred CCeEEEEECcCCeEEEEec-----------CCCCceEEEEECC---CEEEEEcCCCCEEEEecccCc-------------
Confidence 6889999998776544432 3788999999953 699999999999999998543
Q ss_pred cccccccCCCcccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEe
Q 021160 82 FCPRHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFF 160 (316)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 160 (316)
.......+|...|.+++|+|++++|+++ .|+.|++||++++ .....+..|... |.+++|
T Consensus 208 -~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~----------------~~~~~~~~~~~~--v~~~~~- 267 (401)
T 4aez_A 208 -HQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSS----------------IPKFTKTNHNAA--VKAVAW- 267 (401)
T ss_dssp -CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCS----------------SEEEEECCCSSC--CCEEEE-
T ss_pred -ceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCC----------------CccEEecCCcce--EEEEEE-
Confidence 1222236789999999999999988885 7999999999887 677778888866 999999
Q ss_pred cCCC-cEEEEec--cCCeEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEE--eCCCcEEEecCCCCC---CCCCC
Q 021160 161 GPND-EYVMSGS--DCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATC--GIEKTVKLWAPMPTD---FPPLP 232 (316)
Q Consensus 161 ~~~~-~~l~~~~--~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~--~~d~~i~iwd~~~~~---~~~~~ 232 (316)
+|++ .++++++ .|+.|++||+.+++.+..+. +...|.+++|+|++++++++ +.|+.|++|++..+. ...+.
T Consensus 268 ~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~ 346 (401)
T 4aez_A 268 CPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIP 346 (401)
T ss_dssp CTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEE
T ss_pred CCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEec
Confidence 7865 5666654 79999999999999988886 56789999999999999884 489999999998864 33355
Q ss_pred CCcccceeeeecCCCCceeEEecCCCeEEEEEecccCcc
Q 021160 233 DNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTL 271 (316)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~~~ 271 (316)
+|...+..+. +++++.++++++.|+.+++|++.+++..
T Consensus 347 ~h~~~v~~~~-~s~dg~~l~s~~~dg~i~iw~~~~~~~~ 384 (401)
T 4aez_A 347 AHDTRVLYSA-LSPDGRILSTAASDENLKFWRVYDGDHV 384 (401)
T ss_dssp CCSSCCCEEE-ECTTSSEEEEECTTSEEEEEECCC----
T ss_pred CCCCCEEEEE-ECCCCCEEEEEeCCCcEEEEECCCCccc
Confidence 7777776666 7889999999999999999999887544
No 96
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.97 E-value=1.9e-30 Score=250.96 Aligned_cols=247 Identities=10% Similarity=0.067 Sum_probs=208.4
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
+|.|++||+.+.+....+ .+|...|++++|+|++ .++++++.||.|++||+.+++..
T Consensus 982 ~g~i~i~d~~~~~~~~~~-----------~~h~~~v~~l~~s~dg-~~l~s~~~dg~i~vwd~~~~~~~----------- 1038 (1249)
T 3sfz_A 982 DGAIKIIELPNNRVFSSG-----------VGHKKAVRHIQFTADG-KTLISSSEDSVIQVWNWQTGDYV----------- 1038 (1249)
T ss_dssp TSCCEEEETTTTSCEEEC-----------CCCSSCCCCEEECSSS-SCEEEECSSSBEEEEETTTTEEE-----------
T ss_pred CCCEEEEEcCCCceeeec-----------ccCCCceEEEEECCCC-CEEEEEcCCCEEEEEECCCCceE-----------
Confidence 578999999876543322 2488999999999999 89999999999999999987621
Q ss_pred cccccccCCCcccEEEEEEccCCCeEEEecCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEec
Q 021160 82 FCPRHLIGKNNIHITGLAYSNTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFG 161 (316)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 161 (316)
. ...|...+.+++|+|++.+++++.|+.|++||+.++ +....+.+|... |.+++| +
T Consensus 1039 ----~-~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~----------------~~~~~~~~~~~~--v~~~~~-s 1094 (1249)
T 3sfz_A 1039 ----F-LQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITG----------------RIERDFTCHQGT--VLSCAI-S 1094 (1249)
T ss_dssp ----C-CBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTT----------------CCCEEEECCSSC--CCCEEE-C
T ss_pred ----E-EecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCC----------------ceeEEEcccCCc--EEEEEE-C
Confidence 1 257889999999999887777789999999999988 678889999876 999999 9
Q ss_pred CCCcEEEEeccCCeEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC-CCCC---------
Q 021160 162 PNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD-FPPL--------- 231 (316)
Q Consensus 162 ~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~-~~~~--------- 231 (316)
|++.++++++.|+.|++||+.+++++..+.+|...|++++|+|++++|++++.||.|++||+.+++ ...+
T Consensus 1095 ~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 1174 (1249)
T 3sfz_A 1095 SDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGT 1174 (1249)
T ss_dssp SSSSSCEEECCSSCCCEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSSCCCCCCCCCC-----
T ss_pred CCCCEEEEEcCCCcEEEEECCCcceeeeeccCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEeccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999876 3333
Q ss_pred CCCcccceeeeecCCCCceeEEecCCCeEEEEEecccCcce----------eEEeecccccccccCCCCeEEEEecc
Q 021160 232 PDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTLA----------YRERRYNAADFESDEEEGETYLLGFS 298 (316)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~v~~~~~~ 298 (316)
..|...+..+. +++++.++++++ +.+++|++.+++... ...++|++..+.+.+.+|.+++|++.
T Consensus 1175 ~~~~~~v~~l~-fs~dg~~l~s~~--g~v~vwd~~~g~~~~~~~~~~~~i~~~~~s~dg~~l~~~~~dg~v~vw~l~ 1248 (1249)
T 3sfz_A 1175 ATHGGWVTDVC-FSPDSKTLVSAG--GYLKWWNVATGDSSQTFYTNGTNLKKIHVSPDFRTYVTVDNLGILYILQVL 1248 (1249)
T ss_dssp --CCSCCCEEE-ECTTSSCEEEES--SSEEEBCSSSCBCCCCCCCSSCCCCCCEECSSSCCEEEECTTCCEEEECCC
T ss_pred cccCceEEEEE-ECCCCCEEEECC--CeEEEEECCCCceeeeeeccCCcccEEEECCCCCEEEEecCCcEEEEEeec
Confidence 45666776666 888999998886 899999987653321 12678888888889999999999864
No 97
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.97 E-value=1.1e-28 Score=210.87 Aligned_cols=234 Identities=14% Similarity=0.187 Sum_probs=181.8
Q ss_pred ceeeEEEEeeCCCcceEEEeccccc--cccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCc
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSE--NSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPV 79 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~--~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~ 79 (316)
+|.|++||+.+......+....... .....+|...|.+++|+|++..+|++++.||.|++||+.+++.
T Consensus 65 dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~---------- 134 (408)
T 4a11_B 65 DGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQT---------- 134 (408)
T ss_dssp TSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEE----------
T ss_pred CCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCcc----------
Confidence 6889999999877655554321111 1112358999999999995548999999999999999998762
Q ss_pred eecccccccCCCcccEEEEEEccCC---CeEEE-ecCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceee
Q 021160 80 DTFCPRHLIGKNNIHITGLAYSNTS---ELLIS-YNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVK 155 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~i~~~~~~~~~---~~l~s-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 155 (316)
.... .+...+.++.|++.+ .++++ +.|+.|++||++++ .....+.+|... |.
T Consensus 135 ----~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~----------------~~~~~~~~~~~~--v~ 190 (408)
T 4a11_B 135 ----ADVF--NFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSG----------------SCSHILQGHRQE--IL 190 (408)
T ss_dssp ----EEEE--ECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSS----------------CCCEEECCCCSC--EE
T ss_pred ----ceec--cCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCc----------------ceeeeecCCCCc--EE
Confidence 2111 256778999999855 36776 47999999999987 677888888866 99
Q ss_pred eEEEecCCCc-EEEEeccCCeEEEEeccCCe-eEEEe---------------ecCccceEEEEEcCCCCeEEEEeCCCcE
Q 021160 156 GVNFFGPNDE-YVMSGSDCGHLFIWKKKGGK-LVRLM---------------VGDRHVVNQLEPHPHIPMFATCGIEKTV 218 (316)
Q Consensus 156 ~~~~~~~~~~-~l~~~~~dg~v~~wd~~~~~-~~~~~---------------~~~~~~v~~~~~~p~~~~l~s~~~d~~i 218 (316)
+++| +|++. ++++++.||.|++||+++++ .+..+ ..|...|.+++|+|++++|++++.|+.|
T Consensus 191 ~~~~-~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 269 (408)
T 4a11_B 191 AVSW-SPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRM 269 (408)
T ss_dssp EEEE-CSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEEE-CCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeE
Confidence 9999 89888 58999999999999998765 34444 5688899999999999999999999999
Q ss_pred EEecCCCCC-CC-----------------------------------------------CCCCCcccceeeeecCCCCce
Q 021160 219 KLWAPMPTD-FP-----------------------------------------------PLPDNAEKIMKANKQGREDHS 250 (316)
Q Consensus 219 ~iwd~~~~~-~~-----------------------------------------------~~~~~~~~~~~~~~~~~~~~~ 250 (316)
++||+.+++ .. .+.+|...+..+. +++++.+
T Consensus 270 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~-~s~~~~~ 348 (408)
T 4a11_B 270 RLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCV-FQSNFQE 348 (408)
T ss_dssp EEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEE-EETTTTE
T ss_pred EEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEE-EcCCCCE
Confidence 999998754 11 1234556665555 7888999
Q ss_pred eEEecCCCeEEEEEecccCcc
Q 021160 251 RITLTPDVIMHVLRLQRRQTL 271 (316)
Q Consensus 251 ~~s~~~d~~~~~w~~~~~~~~ 271 (316)
+++++.|+.+++|++.+.+..
T Consensus 349 l~s~~~dg~i~iw~~~~~~~~ 369 (408)
T 4a11_B 349 LYSGSRDCNILAWVPSLYEPV 369 (408)
T ss_dssp EEEEETTSCEEEEEECC----
T ss_pred EEEECCCCeEEEEeCCCCCcc
Confidence 999999999999999987554
No 98
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.2e-28 Score=213.73 Aligned_cols=201 Identities=11% Similarity=0.094 Sum_probs=161.0
Q ss_pred CCccceEEEEECCCCCcE-EEEEecCCcEEEEeCc--CCcccCCCCCCCCceeccccccc-CCCcccEEEEEEccCCCeE
Q 021160 32 MNSIRLNAIVIDPRNPNY-FAVGGSDEYARVYDIR--KCHWYSPISSDTPVDTFCPRHLI-GKNNIHITGLAYSNTSELL 107 (316)
Q Consensus 32 gh~~~v~~~~~~~~~~~~-l~~g~~dg~v~~wd~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l 107 (316)
+|.+.|++++|+|++ .+ +++|+.||.|++||+. +++ +...+. ..|...|.+++|+|++++|
T Consensus 100 ~~~~~v~~~~~s~d~-~~l~~~~~~dg~v~iwd~~~~~~~--------------~~~~~~~~~~~~~v~~~~~sp~~~~l 164 (450)
T 2vdu_B 100 PIYSYIRNLRLTSDE-SRLIACADSDKSLLVFDVDKTSKN--------------VLKLRKRFCFSKRPNAISIAEDDTTV 164 (450)
T ss_dssp CCCCCEEEEEECTTS-SEEEEEEGGGTEEEEEEECSSSSS--------------CEEEEEEEECSSCEEEEEECTTSSEE
T ss_pred ccCCceEEEEEcCCC-CEEEEEECCCCeEEEEECcCCCCc--------------eeeeeecccCCCCceEEEEcCCCCEE
Confidence 567789999999999 66 5899999999999998 665 222221 2456889999999999988
Q ss_pred EEe-cCCcEEEEEcCCCCCCCCccCCccccccCC-CcceeeCCcCCceeeeEEEecCC---CcEEEEeccCCeEEEEecc
Q 021160 108 ISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKRE-EPQVYSGHRNSQTVKGVNFFGPN---DEYVMSGSDCGHLFIWKKK 182 (316)
Q Consensus 108 ~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~---~~~l~~~~~dg~v~~wd~~ 182 (316)
+++ .++.|++|++..+.. .. ....+.+|... |.+++| +|+ +.+|++++.|+.|++||+.
T Consensus 165 ~~~~~~g~v~~~~~~~~~~-------------~~~~~~~~~~h~~~--v~~~~~-sp~~~~~~~l~s~~~d~~i~vwd~~ 228 (450)
T 2vdu_B 165 IIADKFGDVYSIDINSIPE-------------EKFTQEPILGHVSM--LTDVHL-IKDSDGHQFIITSDRDEHIKISHYP 228 (450)
T ss_dssp EEEETTSEEEEEETTSCCC-------------SSCCCCCSEECSSC--EEEEEE-EECTTSCEEEEEEETTSCEEEEEES
T ss_pred EEEeCCCcEEEEecCCccc-------------ccccceeeecccCc--eEEEEE-cCCCCCCcEEEEEcCCCcEEEEECC
Confidence 875 799999999987610 01 22367778866 999999 899 9999999999999999999
Q ss_pred CCeeEEE-eecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC-CCCCCC-------------------------Cc
Q 021160 183 GGKLVRL-MVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD-FPPLPD-------------------------NA 235 (316)
Q Consensus 183 ~~~~~~~-~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~-~~~~~~-------------------------~~ 235 (316)
+++.+.. +.+|...|.+++|+ ++++|++++.|+.|++||+++++ +..+.. ..
T Consensus 229 ~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (450)
T 2vdu_B 229 QCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIE 307 (450)
T ss_dssp CTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBC
T ss_pred CCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccce
Confidence 9988877 56899999999999 99999999999999999998876 332221 11
Q ss_pred ccceeeeecCCCCceeEEec-CCCeEEEEEe
Q 021160 236 EKIMKANKQGREDHSRITLT-PDVIMHVLRL 265 (316)
Q Consensus 236 ~~~~~~~~~~~~~~~~~s~~-~d~~~~~w~~ 265 (316)
..+..+ .+.++++++++++ .++.|++|++
T Consensus 308 ~~v~~i-~~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 308 FAVSKI-IKSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp CCEEEE-EECSSSSEEEEEETTCSEEEEEEE
T ss_pred EEEEEE-EEeCCCCEEEEEECCCCeEEEEEe
Confidence 223333 4667888888888 8999999999
No 99
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.97 E-value=7e-29 Score=207.27 Aligned_cols=220 Identities=11% Similarity=0.033 Sum_probs=173.5
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCc-EEEEEecCCcEEEEeC-cCCcccCCCCCCCCc
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPN-YFAVGGSDEYARVYDI-RKCHWYSPISSDTPV 79 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~-~l~~g~~dg~v~~wd~-~~~~~~~~~~~~~~~ 79 (316)
+|.|++||+.+.+........ .+|...|.+++|+|++ . +|++|+.||.|++||+ .+++.
T Consensus 32 d~~v~iw~~~~~~~~~~~~~~--------~~~~~~v~~~~~~~~~-~~~l~~~~~dg~i~~wd~~~~~~~---------- 92 (342)
T 1yfq_A 32 DGSLTVYKFDIQAKNVDLLQS--------LRYKHPLLCCNFIDNT-DLQIYVGTVQGEILKVDLIGSPSF---------- 92 (342)
T ss_dssp TSEEEEEEEETTTTEEEEEEE--------EECSSCEEEEEEEESS-SEEEEEEETTSCEEEECSSSSSSE----------
T ss_pred CCeEEEEEeCCCCccccceee--------eecCCceEEEEECCCC-CcEEEEEcCCCeEEEEEeccCCce----------
Confidence 689999999987622111111 0278899999999998 8 9999999999999999 76641
Q ss_pred eecccccccCC--CcccEEEEEEccCCCeEEE-ecCCcEEEEEcCC---------CCCCCCccCCccccccCCCcceeeC
Q 021160 80 DTFCPRHLIGK--NNIHITGLAYSNTSELLIS-YNDELVYLFEKNM---------GLGPSPLSLSPEDLQKREEPQVYSG 147 (316)
Q Consensus 80 ~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~s-~~d~~i~iwd~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (316)
..+ .+ |...|.+++|+| +.++++ +.|+.|++||+++ . +....+.
T Consensus 93 -----~~~-~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~----------------~~~~~~~- 148 (342)
T 1yfq_A 93 -----QAL-TNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKN----------------LNSNNTK- 148 (342)
T ss_dssp -----EEC-BSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEE----------------SCSSSSS-
T ss_pred -----Eec-cccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccC----------------CeeeEEe-
Confidence 122 56 899999999999 887777 5799999999986 4 4455555
Q ss_pred CcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccC-Ce--eEEEeecCccceEEEEEcC-CCCeEEEEeCCCcEEEecC
Q 021160 148 HRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKG-GK--LVRLMVGDRHVVNQLEPHP-HIPMFATCGIEKTVKLWAP 223 (316)
Q Consensus 148 ~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~-~~--~~~~~~~~~~~v~~~~~~p-~~~~l~s~~~d~~i~iwd~ 223 (316)
+... +.+++| ++++ +++++.++.|++||+++ ++ .......|...+.+++|+| +++++++++.||.|++|++
T Consensus 149 ~~~~--v~~~~~-~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~ 223 (342)
T 1yfq_A 149 VKNK--IFTMDT-NSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFF 223 (342)
T ss_dssp SCCC--EEEEEE-CSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEEC
T ss_pred eCCc--eEEEEe-cCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEE
Confidence 5544 999999 7776 99999999999999987 54 3334456788999999999 9999999999999999998
Q ss_pred CCC------C-CCCCCCCcc---------cceeeeecCCCCceeEEecCCCeEEEEEecccCc
Q 021160 224 MPT------D-FPPLPDNAE---------KIMKANKQGREDHSRITLTPDVIMHVLRLQRRQT 270 (316)
Q Consensus 224 ~~~------~-~~~~~~~~~---------~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~~ 270 (316)
... . ...+..|.. .+..+. +++++.++++++.|+.+++||+.+++.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~s~~~~~l~~~~~dg~i~vwd~~~~~~ 285 (342)
T 1yfq_A 224 DDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIE-FSPRHKFLYTAGSDGIISCWNLQTRKK 285 (342)
T ss_dssp CTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEE-ECTTTCCEEEEETTSCEEEEETTTTEE
T ss_pred cCCCcccccccceeeecccccccccccceeEEEEE-EcCCCCEEEEecCCceEEEEcCccHhH
Confidence 765 3 334444433 555554 788999999999999999999987644
No 100
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.97 E-value=6.1e-29 Score=216.44 Aligned_cols=233 Identities=12% Similarity=0.174 Sum_probs=179.8
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECC--CCCcEEEEEecCCcEEEEeCcCCcccCCCCCCC--
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDP--RNPNYFAVGGSDEYARVYDIRKCHWYSPISSDT-- 77 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~--~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~-- 77 (316)
+|.|++||+++.+....+. +|...|.+++|++ ++ .++++|+.|+.|++||+++.+.........
T Consensus 182 dg~i~vwd~~~~~~~~~~~-----------~h~~~v~~l~~~~~~~~-~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~ 249 (464)
T 3v7d_B 182 DRTVRVWDIKKGCCTHVFE-----------GHNSTVRCLDIVEYKNI-KYIVTGSRDNTLHVWKLPKESSVPDHGEEHDY 249 (464)
T ss_dssp TSCEEEEETTTTEEEEEEC-----------CCSSCEEEEEEEESSSC-EEEEEEETTSCEEEEECCCCCCC------CCS
T ss_pred CCCEEEEECCCCcEEEEEC-----------CCCCccEEEEEecCCCC-CEEEEEcCCCcEEEeeCCCCcccccccccCCc
Confidence 6899999998876544432 4788999999984 55 899999999999999998776332211110
Q ss_pred Cce------ecccccccCCCcccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcC
Q 021160 78 PVD------TFCPRHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRN 150 (316)
Q Consensus 78 ~~~------~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (316)
+.. .........+|...+.++ ++++.+++++ .|+.|++||+.++ +.+..+.+|..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~----------------~~~~~~~~~~~ 311 (464)
T 3v7d_B 250 PLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQM----------------KCLYILSGHTD 311 (464)
T ss_dssp SEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTT----------------EEEEEECCCSS
T ss_pred ceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCC----------------cEEEEecCCCC
Confidence 000 000112236788888887 5677877774 7999999999887 67788888886
Q ss_pred CceeeeEEEecCCCcEEEEeccCCeEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCCCCC
Q 021160 151 SQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPP 230 (316)
Q Consensus 151 ~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~~~~ 230 (316)
. |.+++| +|++.++++|+.||.|++||+++++++..+.+|...|.+++|+ +++|++++.||.|++||+.+.....
T Consensus 312 ~--v~~~~~-~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~ 386 (464)
T 3v7d_B 312 R--IYSTIY-DHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKF 386 (464)
T ss_dssp C--EEEEEE-ETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEE
T ss_pred C--EEEEEE-cCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceee
Confidence 6 999999 9999999999999999999999999999999999999999997 4789999999999999998865221
Q ss_pred CCCCcccceeeeecCCCCceeEEecCCCeEEEEEecccCcc
Q 021160 231 LPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTL 271 (316)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~~~ 271 (316)
.. +.........+.+++.++++++ |+.+++|++.+++..
T Consensus 387 ~~-~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~ 425 (464)
T 3v7d_B 387 SY-HHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLV 425 (464)
T ss_dssp EE-ECTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEE
T ss_pred ee-cCCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEE
Confidence 11 2222334444777888898888 899999999887544
No 101
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.97 E-value=2.4e-29 Score=212.23 Aligned_cols=183 Identities=8% Similarity=0.060 Sum_probs=145.5
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
+|.|+|||+.+.+....+ . |...|.+++|+|++ +++++++. +.+++|+..+++.
T Consensus 156 d~~i~iwd~~~~~~~~~~--~----------~~~~V~~v~fspdg-~~l~s~s~-~~~~~~~~~~~~~------------ 209 (365)
T 4h5i_A 156 PAIMRIIDPSDLTEKFEI--E----------TRGEVKDLHFSTDG-KVVAYITG-SSLEVISTVTGSC------------ 209 (365)
T ss_dssp SCEEEEEETTTTEEEEEE--E----------CSSCCCEEEECTTS-SEEEEECS-SCEEEEETTTCCE------------
T ss_pred CCEEEEeECCCCcEEEEe--C----------CCCceEEEEEccCC-ceEEeccc-eeEEEEEeccCcc------------
Confidence 578999999887654332 2 56789999999999 89998875 4566777666652
Q ss_pred cccccccCCCcccEEEEEEccCCCeEEEe-cCC----cEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeee
Q 021160 82 FCPRHLIGKNNIHITGLAYSNTSELLISY-NDE----LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKG 156 (316)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 156 (316)
........|...|.+++|+|++++++++ .|+ .+++|++.... ........+.+|... |++
T Consensus 210 -~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~------------~~~~~~~~~~~~~~~--V~~ 274 (365)
T 4h5i_A 210 -IARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGN------------TSVLRSKQVTNRFKG--ITS 274 (365)
T ss_dssp -EEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTE------------EEEEEEEEEESSCSC--EEE
T ss_pred -eeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccce------------ecceeeeeecCCCCC--eEe
Confidence 1222336788899999999999977774 455 57888876541 000123456677766 999
Q ss_pred EEEecCCCcEEEEeccCCeEEEEeccCCeeEEEe-ecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCC
Q 021160 157 VNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLM-VGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPT 226 (316)
Q Consensus 157 ~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~-~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~ 226 (316)
++| +|+|++|++|+.|+.|+|||+++++++..+ .+|...|++++|+|++++||++|.|++|+||++...
T Consensus 275 ~~~-Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 275 MDV-DMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEE-CTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred EEE-CCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 999 999999999999999999999999999875 789999999999999999999999999999999654
No 102
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=9.1e-30 Score=216.97 Aligned_cols=239 Identities=11% Similarity=0.010 Sum_probs=157.2
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECC--------CCCcEEEEEecCCcEEEEeCcCCcccCCC
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDP--------RNPNYFAVGGSDEYARVYDIRKCHWYSPI 73 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~--------~~~~~l~~g~~dg~v~~wd~~~~~~~~~~ 73 (316)
+++|+|||+++.+.......... .||.+.|++++|+| ++ ++||+|+.|++|+|||+.++.
T Consensus 110 d~~v~lw~~~~~~~~~~~~~~~~------~gH~~~v~~v~~~p~~~~~~~~d~-~~las~s~D~tv~~Wd~~~~~----- 177 (393)
T 4gq1_A 110 DNTVRLIITKNETIITQHVLGGK------SGHHNFVNDIDIADVYSADNRLAE-QVIASVGDDCTLIIWRLTDEG----- 177 (393)
T ss_dssp TSCEEEEEEETTEEEEEEEECTT------TSCSSCEEEEEEEEEECTTCSEEE-EEEEEEETTSEEEEEEEETTE-----
T ss_pred CCcEEEEECCCCccceeeeeccc------CCCCCceEEEEEccccccccCCCC-CEEEEEECCCeEEEEECCCCc-----
Confidence 68899999998765444333322 47999999999997 56 899999999999999998765
Q ss_pred CCCCCceecccccccCCCcccEEEEEEccCCC-eEEEe-cCCcEEEEEcCCCCCCCCccCCccc---------cccCCCc
Q 021160 74 SSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE-LLISY-NDELVYLFEKNMGLGPSPLSLSPED---------LQKREEP 142 (316)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~---------~~~~~~~ 142 (316)
+.... ..|...+.+++|+|++. +|+++ .|++|++||++++............ .......
T Consensus 178 ---------~~~~~-~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 247 (393)
T 4gq1_A 178 ---------PILAG-YPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNT 247 (393)
T ss_dssp ---------EEEEE-EECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC--
T ss_pred ---------eeeee-cCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceee
Confidence 22222 56778999999999885 67774 7999999999876421111000000 0000111
Q ss_pred ceeeCCcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCeeEEEeecCccceEEEEEcC------------------
Q 021160 143 QVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHP------------------ 204 (316)
Q Consensus 143 ~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p------------------ 204 (316)
....+|... +.++.|+++++..+++++.|+.+++||+..++....+..|...+..+.+.|
T Consensus 248 ~~~~~~~~~--v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (393)
T 4gq1_A 248 CHSSGIASS--LANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHP 325 (393)
T ss_dssp ----CCSSS--CSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECS
T ss_pred eeccccccc--ceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEcc
Confidence 123455544 899999779999999999999999999998877766666555444443333
Q ss_pred --CCCeEEEEeCCCcEEEecCCCCC-CCCCCCCcccceeeeecCCCCceeEEecCCCeEEEEEec
Q 021160 205 --HIPMFATCGIEKTVKLWAPMPTD-FPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQ 266 (316)
Q Consensus 205 --~~~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~ 266 (316)
++.++++|+.|+.|++||+..+. ...+..|...|..++ |+++++++++++.+| +.+|++.
T Consensus 326 ~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~sva-fspdG~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 326 RYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFC-WHQDGSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp SCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEE-ECTTSSEEEEEESSE-EEEEEEG
T ss_pred CCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEE-EcCCCCEEEEEeCCC-eEEEEEe
Confidence 23357788899999999998876 445556777777666 899999999998666 5666654
No 103
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=1.1e-28 Score=211.01 Aligned_cols=243 Identities=12% Similarity=0.064 Sum_probs=188.6
Q ss_pred ceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEcc-CCCeEEEe-cCC
Q 021160 36 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSN-TSELLISY-NDE 113 (316)
Q Consensus 36 ~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~s~-~d~ 113 (316)
....++++|+...++++++.||.|++|++...... . .......+|...|.+++|+| ++++|+++ .|+
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~-----~------~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg 104 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRV-----D------KNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDC 104 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEEC-----C------TTCCCBCCCSSCEEEEEECTTCTTEEEEEETTS
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCC-----C------CCCceEecCCCCEEEEEeCCCCCCEEEEEeCCC
Confidence 45568899977445556889999999999654311 0 11122378999999999999 88888885 799
Q ss_pred cEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCC-cEEEEeccCCeEEEEeccCCeeEEEe--
Q 021160 114 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPND-EYVMSGSDCGHLFIWKKKGGKLVRLM-- 190 (316)
Q Consensus 114 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~l~~~~~dg~v~~wd~~~~~~~~~~-- 190 (316)
.|++||+..+.... ........+.+|... |.+++| +|++ .+|++++.|+.|++||+.+++.+..+
T Consensus 105 ~v~vw~~~~~~~~~---------~~~~~~~~~~~h~~~--v~~~~~-~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 172 (402)
T 2aq5_A 105 TVMVWEIPDGGLVL---------PLREPVITLEGHTKR--VGIVAW-HPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGP 172 (402)
T ss_dssp EEEEEECCTTCCSS---------CBCSCSEEEECCSSC--EEEEEE-CSSBTTEEEEEETTSCEEEEETTTTEEEEEECT
T ss_pred eEEEEEccCCCCcc---------ccCCceEEecCCCCe--EEEEEE-CcCCCCEEEEEcCCCEEEEEECCCCCccEEEec
Confidence 99999998762100 000246778889866 999999 8887 69999999999999999999999999
Q ss_pred ecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC-CCCC-CCCcccceeeeecCCCCceeEEe---cCCCeEEEEEe
Q 021160 191 VGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD-FPPL-PDNAEKIMKANKQGREDHSRITL---TPDVIMHVLRL 265 (316)
Q Consensus 191 ~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~s~---~~d~~~~~w~~ 265 (316)
..|...|.+++|+|++++|++++.|+.|++||++.++ +..+ ..|.........+.+++.+++++ +.|+.+++||+
T Consensus 173 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~ 252 (402)
T 2aq5_A 173 DVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDT 252 (402)
T ss_dssp TTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEET
T ss_pred CCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcC
Confidence 7899999999999999999999999999999999876 4455 55665533334477889999998 89999999999
Q ss_pred cccCcce------------eEEeeccccccc-ccCCCCeEEEEeccCCC
Q 021160 266 QRRQTLA------------YRERRYNAADFE-SDEEEGETYLLGFSDSD 301 (316)
Q Consensus 266 ~~~~~~~------------~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~ 301 (316)
.....+. ...+.|+...+. ++..++.|.+|++..+.
T Consensus 253 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 253 KHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp TBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSST
T ss_pred ccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCC
Confidence 8754311 115677777775 55678899999998765
No 104
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.97 E-value=8.8e-29 Score=222.47 Aligned_cols=266 Identities=12% Similarity=0.080 Sum_probs=192.1
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCcc---ceEEEEECCC-CCcEEEEEecCCcEEEEeCcCCcccCCCCCCC
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSI---RLNAIVIDPR-NPNYFAVGGSDEYARVYDIRKCHWYSPISSDT 77 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~---~v~~~~~~~~-~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~ 77 (316)
+|.|++||+.+.+....+. +|.. .|.+++|+|+ + ++|++++.|+.|++||+++++.
T Consensus 182 d~~v~vwd~~~~~~~~~~~-----------~~~~~~~~v~~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~-------- 241 (615)
T 1pgu_A 182 DGSVVFYQGPPFKFSASDR-----------THHKQGSFVRDVEFSPDSG-EFVITVGSDRKISCFDGKSGEF-------- 241 (615)
T ss_dssp TTEEEEEETTTBEEEEEEC-----------SSSCTTCCEEEEEECSTTC-CEEEEEETTCCEEEEETTTCCE--------
T ss_pred CCcEEEEeCCCcceeeeec-----------ccCCCCceEEEEEECCCCC-CEEEEEeCCCeEEEEECCCCCE--------
Confidence 5889999987765543332 3677 8999999999 7 8999999999999999998762
Q ss_pred CceecccccccC---CCcccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCCCCC--------------------------
Q 021160 78 PVDTFCPRHLIG---KNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPS-------------------------- 127 (316)
Q Consensus 78 ~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~-------------------------- 127 (316)
...+.. .|...|.+++|+ ++++|+++ .|+.|++||++++....
T Consensus 242 ------~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 314 (615)
T 1pgu_A 242 ------LKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIIS 314 (615)
T ss_dssp ------EEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEE
T ss_pred ------eEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEE
Confidence 222213 788899999999 88877774 79999999998653100
Q ss_pred ---CccCCccccccCCCcceeeCCcCC-----------------------------------------------------
Q 021160 128 ---PLSLSPEDLQKREEPQVYSGHRNS----------------------------------------------------- 151 (316)
Q Consensus 128 ---~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------------------------- 151 (316)
...+..+++.+.+....+.+|...
T Consensus 315 ~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~ 394 (615)
T 1pgu_A 315 LSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDT 394 (615)
T ss_dssp EETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTE
T ss_pred EECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCC
Confidence 011111112111222222222111
Q ss_pred ----------------------------------------------------ceeeeEEEecCCCcEEEEecc-CCeEEE
Q 021160 152 ----------------------------------------------------QTVKGVNFFGPNDEYVMSGSD-CGHLFI 178 (316)
Q Consensus 152 ----------------------------------------------------~~i~~~~~~~~~~~~l~~~~~-dg~v~~ 178 (316)
..+.+++| + ++++++++. ++.|++
T Consensus 395 i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~l~~~~~~d~~i~~ 471 (615)
T 1pgu_A 395 LKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSL-S--QNYVAVGLEEGNTIQV 471 (615)
T ss_dssp EEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEE-C--SSEEEEEETTTSCEEE
T ss_pred EEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEE-c--CCEEEEeecCCCeEEE
Confidence 11333333 2 556666766 777777
Q ss_pred EeccCCeeE-EEeecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC-CCCCCC-CcccceeeeecCC---------
Q 021160 179 WKKKGGKLV-RLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD-FPPLPD-NAEKIMKANKQGR--------- 246 (316)
Q Consensus 179 wd~~~~~~~-~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~-~~~~~~-~~~~~~~~~~~~~--------- 246 (316)
||+.+++.. ..+..|...|.+++|+|++++|++++.|+.|++||+.+++ +..+.+ |...+..+. +++
T Consensus 472 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~-~sp~~~~~~~~~ 550 (615)
T 1pgu_A 472 FKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAIS-WKPAEKGANEEE 550 (615)
T ss_dssp EETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEE-ECCCC------C
T ss_pred EECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEE-EcCccccccccc
Confidence 777766554 5566788999999999999999999999999999998877 566666 877776666 777
Q ss_pred -CCceeEEecCCCeEEEEEecccCcc----------ee-EEeecccccccccCCCCeEEEEeccC
Q 021160 247 -EDHSRITLTPDVIMHVLRLQRRQTL----------AY-RERRYNAADFESDEEEGETYLLGFSD 299 (316)
Q Consensus 247 -~~~~~~s~~~d~~~~~w~~~~~~~~----------~~-~~~~~~~~~~~~~~~~~~v~~~~~~~ 299 (316)
++.++++++.|+.|++|++.+.... +. ..+.|++. +.+...+|.|.+|++..
T Consensus 551 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 551 IEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNVVL 614 (615)
T ss_dssp CSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTSCEEEEEEC-
T ss_pred cCCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC-eEEecCCceEEEEeeec
Confidence 8999999999999999999875211 11 26888888 99999999999999864
No 105
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=6.7e-29 Score=201.55 Aligned_cols=211 Identities=14% Similarity=0.061 Sum_probs=147.3
Q ss_pred CccceEEEEECCC----CCcEEEEEecCCcEEEEeCcCCcccCCC--CCCCCceeccc------ccccCCCcccEEEEEE
Q 021160 33 NSIRLNAIVIDPR----NPNYFAVGGSDEYARVYDIRKCHWYSPI--SSDTPVDTFCP------RHLIGKNNIHITGLAY 100 (316)
Q Consensus 33 h~~~v~~~~~~~~----~~~~l~~g~~dg~v~~wd~~~~~~~~~~--~~~~~~~~~~~------~~~~~~~~~~i~~~~~ 100 (316)
|...|++++|+|+ + +++++++.+ +++|++.++++.... .....++.+.. ......|...+..++|
T Consensus 110 ~~~~v~sla~spd~~~~~-~~l~s~g~~--~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~f 186 (356)
T 2w18_A 110 EIREIRALFCSSDDESEK-QVLLKSGNI--KAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTF 186 (356)
T ss_dssp SEEEEEEECC------CC-EEEEEEEEE--EEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEE
T ss_pred cccceEEEEECCCccccc-cEEEeCCCe--EEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEe
Confidence 4567899999999 7 777777642 555555554433221 01222221111 0111356677778888
Q ss_pred cc---CCCeEEE-ecCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcC-CceeeeEEEecCCCcEE--------
Q 021160 101 SN---TSELLIS-YNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRN-SQTVKGVNFFGPNDEYV-------- 167 (316)
Q Consensus 101 ~~---~~~~l~s-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~l-------- 167 (316)
++ ++.+|++ +.|++|+|||+.++ +.++.+.+|.. ...+.+++| +|++.++
T Consensus 187 s~~~g~~~~LaSgS~D~TIkIWDl~TG----------------k~l~tL~g~~~~v~~v~~vaf-SpdG~~lvs~s~~~~ 249 (356)
T 2w18_A 187 AEVQGMQEALLGTTIMNNIVIWNLKTG----------------QLLKKMHIDDSYQASVCHKAY-SEMGLLFIVLSHPCA 249 (356)
T ss_dssp EEEETSTTEEEEEETTSEEEEEETTTC----------------CEEEEEECCC---CCCEEEEE-EETTEEEEEEC----
T ss_pred eccCCCCceEEEecCCCcEEEEECCCC----------------cEEEEEcCCCcceeeeEEEEE-CCCCCEEEEeccCCC
Confidence 88 5578888 47999999999998 78888876542 123777888 8999886
Q ss_pred ----EEeccCCeEEEEeccCCeeEEEe-----ecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC-CCCCCCCccc
Q 021160 168 ----MSGSDCGHLFIWKKKGGKLVRLM-----VGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD-FPPLPDNAEK 237 (316)
Q Consensus 168 ----~~~~~dg~v~~wd~~~~~~~~~~-----~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~~~ 237 (316)
++|+.|+++++||..+++.+..+ .+|...+.+..++ +..+|+++.|++|+|||+.+++ +.++.+|...
T Consensus 250 ~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~ 327 (356)
T 2w18_A 250 KESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQ 327 (356)
T ss_dssp --------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSEEEEECCC--C
T ss_pred cceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCC
Confidence 56788999999999999988765 3666555544444 7889999999999999999998 7778888887
Q ss_pred ceeeeecCCCCceeEEecCCCeEEEEEe
Q 021160 238 IMKANKQGREDHSRITLTPDVIMHVLRL 265 (316)
Q Consensus 238 ~~~~~~~~~~~~~~~s~~~d~~~~~w~~ 265 (316)
+.....|++++.++++++.|++|++||+
T Consensus 328 vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 328 HWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp CCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred eEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 7765569999999999999999999985
No 106
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.97 E-value=6.4e-29 Score=207.50 Aligned_cols=232 Identities=8% Similarity=-0.048 Sum_probs=187.1
Q ss_pred CCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCC-eEEEe
Q 021160 32 MNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE-LLISY 110 (316)
Q Consensus 32 gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~s~ 110 (316)
+|...|++++|+|++ .+|++++.|+.|++|++.+++.. ...... ..|...|.+++|+|+++ +|+++
T Consensus 9 ~h~~~v~~~~~s~~~-~~l~~~~~d~~v~iw~~~~~~~~-----------~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~ 75 (342)
T 1yfq_A 9 APKDYISDIKIIPSK-SLLLITSWDGSLTVYKFDIQAKN-----------VDLLQS-LRYKHPLLCCNFIDNTDLQIYVG 75 (342)
T ss_dssp CCSSCEEEEEEEGGG-TEEEEEETTSEEEEEEEETTTTE-----------EEEEEE-EECSSCEEEEEEEESSSEEEEEE
T ss_pred CCCCcEEEEEEcCCC-CEEEEEcCCCeEEEEEeCCCCcc-----------ccceee-eecCCceEEEEECCCCCcEEEEE
Confidence 589999999999998 89999999999999999876410 011222 47889999999999999 88875
Q ss_pred -cCCcEEEEEc-CCCCCCCCccCCccccccCCCcceeeC--CcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccC---
Q 021160 111 -NDELVYLFEK-NMGLGPSPLSLSPEDLQKREEPQVYSG--HRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKG--- 183 (316)
Q Consensus 111 -~d~~i~iwd~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~--- 183 (316)
.|+.|++||+ ..+ ....+.+ |... |.+++| +| +.++++++.|+.|++||+++
T Consensus 76 ~~dg~i~~wd~~~~~-----------------~~~~~~~~~~~~~--v~~l~~-~~-~~~l~s~~~d~~i~iwd~~~~~~ 134 (342)
T 1yfq_A 76 TVQGEILKVDLIGSP-----------------SFQALTNNEANLG--ICRICK-YG-DDKLIAASWDGLIEVIDPRNYGD 134 (342)
T ss_dssp ETTSCEEEECSSSSS-----------------SEEECBSCCCCSC--EEEEEE-ET-TTEEEEEETTSEEEEECHHHHTT
T ss_pred cCCCeEEEEEeccCC-----------------ceEeccccCCCCc--eEEEEe-CC-CCEEEEEcCCCeEEEEccccccc
Confidence 7999999999 775 3466777 7766 999999 78 99999999999999999987
Q ss_pred ------CeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCC-CCCC---CCCCCcccceeeeecCC-CCceeE
Q 021160 184 ------GKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMP-TDFP---PLPDNAEKIMKANKQGR-EDHSRI 252 (316)
Q Consensus 184 ------~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~-~~~~---~~~~~~~~~~~~~~~~~-~~~~~~ 252 (316)
++++..+. |...|.+++|+|++ +++++.|+.|++||++. .... ....+...+..+. +.+ ++.+++
T Consensus 135 ~~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~-~~~~~~~~l~ 210 (342)
T 1yfq_A 135 GVIAVKNLNSNNTK-VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVA-LLPKEQEGYA 210 (342)
T ss_dssp BCEEEEESCSSSSS-SCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEE-ECSGGGCEEE
T ss_pred ccccccCCeeeEEe-eCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEE-ECCCCCCEEE
Confidence 66666666 88899999999987 89999999999999988 4421 2233555555555 777 889999
Q ss_pred EecCCCeEEEEEeccc------Cc------------------ceeE-EeecccccccccCCCCeEEEEeccCCC
Q 021160 253 TLTPDVIMHVLRLQRR------QT------------------LAYR-ERRYNAADFESDEEEGETYLLGFSDSD 301 (316)
Q Consensus 253 s~~~d~~~~~w~~~~~------~~------------------~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~ 301 (316)
+++.|+.+++|++... .. .+.. .+.|++..+.++..+|.|++|+...+.
T Consensus 211 ~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~ 284 (342)
T 1yfq_A 211 CSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRK 284 (342)
T ss_dssp EEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTE
T ss_pred EEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHh
Confidence 9999999999998765 11 1222 677788888888899999999987664
No 107
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.96 E-value=1.5e-28 Score=206.94 Aligned_cols=235 Identities=10% Similarity=0.058 Sum_probs=168.7
Q ss_pred ceeeEEEEeeCCC-cc-eEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCc
Q 021160 2 VLFNMLFDLRSDS-AT-RLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPV 79 (316)
Q Consensus 2 ~g~v~vwd~~~~~-~~-~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~ 79 (316)
+|.|+|||+.+.. .. ..+. +|...|++++|+|++ .+|++++.||.|++||+++++.
T Consensus 63 dg~i~iw~~~~~~~~~~~~~~-----------~h~~~v~~~~~~~~~-~~l~s~~~dg~v~iwd~~~~~~---------- 120 (368)
T 3mmy_A 63 ANDVRCWEVQDSGQTIPKAQQ-----------MHTGPVLDVCWSDDG-SKVFTASCDKTAKMWDLSSNQA---------- 120 (368)
T ss_dssp TSEEEEEEECTTSCEEEEEEE-----------ECSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEE----------
T ss_pred CCcEEEEEcCCCCceeEEEec-----------cccCCEEEEEECcCC-CEEEEEcCCCcEEEEEcCCCCc----------
Confidence 6899999998733 22 2222 378899999999998 8999999999999999998762
Q ss_pred eecccccccCCCcccEEEEEE--ccCCCeEEE-ecCCcEEEEEcCCCCCCCCcc-----------------------CCc
Q 021160 80 DTFCPRHLIGKNNIHITGLAY--SNTSELLIS-YNDELVYLFEKNMGLGPSPLS-----------------------LSP 133 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~i~~~~~--~~~~~~l~s-~~d~~i~iwd~~~~~~~~~~~-----------------------~~~ 133 (316)
.. . ..|...|.+++| +|++.+|++ +.|+.|++||++++....... +..
T Consensus 121 ----~~-~-~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 194 (368)
T 3mmy_A 121 ----IQ-I-AQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIV 194 (368)
T ss_dssp ----EE-E-EECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEE
T ss_pred ----ee-e-ccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEE
Confidence 11 1 468899999999 888887777 479999999998763110000 000
Q ss_pred cccccCCCcceeeCCcCCceeeeEEEecCCCcE----EEEeccCCeEEEEeccCC---eeEEEeecCcc-----------
Q 021160 134 EDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEY----VMSGSDCGHLFIWKKKGG---KLVRLMVGDRH----------- 195 (316)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~----l~~~~~dg~v~~wd~~~~---~~~~~~~~~~~----------- 195 (316)
+++.................+.++++ .++... +++++.||.|++|++... +.+..+..|..
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (368)
T 3mmy_A 195 YQLENQPSEFRRIESPLKHQHRCVAI-FKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDI 273 (368)
T ss_dssp EECSSSCEEEEECCCSCSSCEEEEEE-EECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEE
T ss_pred EEeccccchhhhccccccCCCceEEE-cccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccc
Confidence 00110000000000000011444444 333333 999999999999999887 55777777776
Q ss_pred -ceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC-CCCCCCCcccceeeeecCCCCceeEEecCCCeEEEEEec
Q 021160 196 -VVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD-FPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQ 266 (316)
Q Consensus 196 -~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~ 266 (316)
.|.+++|+|++++|++++.||.|++||+.+++ +..+..|...+..+. +++++.++++++.|+..+.|++.
T Consensus 274 ~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~-~s~~g~~l~~~s~d~~~~~~~~~ 345 (368)
T 3mmy_A 274 YAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACC-FNHNGNIFAYASSYDWSKGHEFY 345 (368)
T ss_dssp CCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEE-ECTTSSCEEEEECCCSTTCGGGC
T ss_pred cceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEE-ECCCCCeEEEEeccccccccccc
Confidence 79999999999999999999999999999876 667777888876666 88999999999998755555443
No 108
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.96 E-value=1.7e-28 Score=212.00 Aligned_cols=215 Identities=11% Similarity=0.243 Sum_probs=174.6
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
+|.|++||+.+.+....+. +|...|.+++|++ .++++|+.||.|++||+.+++..
T Consensus 192 dg~i~vwd~~~~~~~~~~~-----------~h~~~v~~l~~~~---~~l~s~s~dg~i~vwd~~~~~~~----------- 246 (435)
T 1p22_A 192 DSTVRVWDVNTGEMLNTLI-----------HHCEAVLHLRFNN---GMMVTCSKDRSIAVWDMASPTDI----------- 246 (435)
T ss_dssp TSCEEEEESSSCCEEEEEC-----------CCCSCEEEEECCT---TEEEEEETTSCEEEEECSSSSCC-----------
T ss_pred CCeEEEEECCCCcEEEEEc-----------CCCCcEEEEEEcC---CEEEEeeCCCcEEEEeCCCCCCc-----------
Confidence 6899999998876644432 3788999999974 58999999999999999877521
Q ss_pred cccccccCCCcccEEEEEEccCCCeEEE-ecCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEe
Q 021160 82 FCPRHLIGKNNIHITGLAYSNTSELLIS-YNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFF 160 (316)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~~~~~~~l~s-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 160 (316)
.......+|...|.+++| +++++++ +.|+.|++||++++ +.+..+.+|... +.++++
T Consensus 247 -~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~----------------~~~~~~~~~~~~--v~~~~~- 304 (435)
T 1p22_A 247 -TLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTC----------------EFVRTLNGHKRG--IACLQY- 304 (435)
T ss_dssp -EEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTC----------------CEEEEEECCSSC--EEEEEE-
T ss_pred -eeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcC----------------cEEEEEcCCCCc--EEEEEe-
Confidence 111333788999999999 6677777 57999999999988 678888888866 999988
Q ss_pred cCCCcEEEEeccCCeEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC----------CCC
Q 021160 161 GPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD----------FPP 230 (316)
Q Consensus 161 ~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~----------~~~ 230 (316)
++.++++|+.||.|++||+++++++..+.+|...|.+++| ++.+|++|+.||.|++||+.... +..
T Consensus 305 --~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 380 (435)
T 1p22_A 305 --RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRT 380 (435)
T ss_dssp --ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEE
T ss_pred --CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheee
Confidence 3689999999999999999999999999999999999999 67899999999999999986543 334
Q ss_pred CCCCcccceeeeecCCCCceeEEecCCCeEEEEEecccCc
Q 021160 231 LPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQT 270 (316)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~~ 270 (316)
+.+|...+..+.+ ++..+++++.|+.|++|++.+...
T Consensus 381 ~~~h~~~v~~l~~---~~~~l~s~s~Dg~i~iwd~~~~~~ 417 (435)
T 1p22_A 381 LVEHSGRVFRLQF---DEFQIVSSSHDDTILIWDFLNDPA 417 (435)
T ss_dssp ECCCSSCCCCEEE---CSSCEEECCSSSEEEEEC------
T ss_pred ccCCCCCeEEEEe---CCCEEEEEeCCCEEEEEECCCCCC
Confidence 5677777766664 678999999999999999987644
No 109
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.96 E-value=8.7e-28 Score=197.99 Aligned_cols=230 Identities=17% Similarity=0.194 Sum_probs=183.6
Q ss_pred CCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEe
Q 021160 31 PMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY 110 (316)
Q Consensus 31 ~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~ 110 (316)
.+|.+.|++++| |++ .+|++|+.||.|++||+.+++ ....+ ..|...|.+++|+|++++++++
T Consensus 15 ~~h~~~v~~~~~-~~~-~~l~s~~~dg~v~vw~~~~~~--------------~~~~~-~~~~~~v~~~~~~~~~~~l~~~ 77 (313)
T 3odt_A 15 KGHDQDVRDVVA-VDD-SKVASVSRDGTVRLWSKDDQW--------------LGTVV-YTGQGFLNSVCYDSEKELLLFG 77 (313)
T ss_dssp CCCSSCEEEEEE-EET-TEEEEEETTSEEEEEEESSSE--------------EEEEE-EECSSCEEEEEEETTTTEEEEE
T ss_pred hCCCCCcEEEEe-cCC-CEEEEEEcCCcEEEEECCCCE--------------EEEEe-ecCCccEEEEEECCCCCEEEEe
Confidence 368999999999 888 899999999999999998765 22222 5678999999999999988874
Q ss_pred -cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCeeEEE
Q 021160 111 -NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRL 189 (316)
Q Consensus 111 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~ 189 (316)
.|+.|++|++.... ..+....+.+|... +.+++| ++.++++++.|+.|++|| .++.+..
T Consensus 78 ~~dg~i~~~~~~~~~-------------~~~~~~~~~~~~~~--i~~~~~---~~~~l~~~~~d~~i~~~d--~~~~~~~ 137 (313)
T 3odt_A 78 GKDTMINGVPLFATS-------------GEDPLYTLIGHQGN--VCSLSF---QDGVVISGSWDKTAKVWK--EGSLVYN 137 (313)
T ss_dssp ETTSCEEEEETTCCT-------------TSCC-CEECCCSSC--EEEEEE---ETTEEEEEETTSEEEEEE--TTEEEEE
T ss_pred cCCCeEEEEEeeecC-------------CCCcccchhhcccC--EEEEEe---cCCEEEEEeCCCCEEEEc--CCcEEEe
Confidence 79999999987641 11456677788866 999998 477999999999999999 6888888
Q ss_pred eecCccceEEEEEcC-CCCeEEEEeCCCcEEEecCCCCCCCCCCC-CcccceeeeecCCCCceeEEecCCCeEEEEEecc
Q 021160 190 MVGDRHVVNQLEPHP-HIPMFATCGIEKTVKLWAPMPTDFPPLPD-NAEKIMKANKQGREDHSRITLTPDVIMHVLRLQR 267 (316)
Q Consensus 190 ~~~~~~~v~~~~~~p-~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~ 267 (316)
+..|...+.+++|+| +++.+++++.|+.|++||.... ...+.. +...+..+. +++++. +++++.|+.+++|++.+
T Consensus 138 ~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~i~~~~-~~~~~~-~~~~~~dg~i~i~d~~~ 214 (313)
T 3odt_A 138 LQAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDKV-IKTFSGIHNDVVRHLA-VVDDGH-FISCSNDGLIKLVDMHT 214 (313)
T ss_dssp EECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTEE-EEEECSSCSSCEEEEE-EEETTE-EEEEETTSEEEEEETTT
T ss_pred cccCCCceeEEEEccCCCCEEEEEECCCCEEEEecCce-EEEEeccCcccEEEEE-EcCCCe-EEEccCCCeEEEEECCc
Confidence 999999999999988 8899999999999999994332 333333 555555554 677766 99999999999999986
Q ss_pred cCccee----------EEeecccccccccCCCCeEEEEeccCCC
Q 021160 268 RQTLAY----------RERRYNAADFESDEEEGETYLLGFSDSD 301 (316)
Q Consensus 268 ~~~~~~----------~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 301 (316)
++.... ..+.|++ .+.+...+|.|.+|++..+.
T Consensus 215 ~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~ 257 (313)
T 3odt_A 215 GDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGS 257 (313)
T ss_dssp CCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCC
T ss_pred hhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCc
Confidence 543321 1466666 57788889999999987764
No 110
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.96 E-value=2.3e-28 Score=205.55 Aligned_cols=242 Identities=9% Similarity=0.048 Sum_probs=166.3
Q ss_pred CCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEE-E-
Q 021160 32 MNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLI-S- 109 (316)
Q Consensus 32 gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-s- 109 (316)
+|...|++++|+|++ .+|++|+.++ +++|++.+.+. ... .+...+..+++.++++.++ +
T Consensus 17 ~h~~~V~~v~fs~dg-~~la~g~~~~-~~iw~~~~~~~--------------~~~---~~~~~~~~~~~~~~~~~~~~~~ 77 (355)
T 3vu4_A 17 HVSNPVTDYEFNQDQ-SCLILSTLKS-FEIYNVHPVAH--------------IMS---QEMRHLSKVRMLHRTNYVAFVT 77 (355)
T ss_dssp --CCCCCEEEECTTS-SEEEEECSSE-EEEEEETTEEE--------------EEE---EECSCCCEEEECTTSSEEEEEC
T ss_pred cCCCceEEEEECCCC-CEEEEEcCCE-EEEEecCCcce--------------eee---eecCCeEEEEEcCCCCEEEEEE
Confidence 478999999999999 8999888765 78999886652 111 1112467788888887553 3
Q ss_pred ecCCcEEEEEcCCCCCCC----------------------CccCCccccccC-CCcceeeCCcCCceeeeEEEecCCCcE
Q 021160 110 YNDELVYLFEKNMGLGPS----------------------PLSLSPEDLQKR-EEPQVYSGHRNSQTVKGVNFFGPNDEY 166 (316)
Q Consensus 110 ~~d~~i~iwd~~~~~~~~----------------------~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~ 166 (316)
+.|++|++||+.++.... ...+.++++.+. +.+..+.. . ...+++ ++ .+
T Consensus 78 ~~d~~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~---~--~~~~~~-s~--~~ 149 (355)
T 3vu4_A 78 GVKEVVHIWDDVKKQDVSRIKVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIR---F--GGVCEF-SN--GL 149 (355)
T ss_dssp SSTTEEEEEETTTTEEEEEEECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEE---E--EEEEEE-ET--TE
T ss_pred CCccEEEEEECCCCcEEEEEECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEecc---C--CceEEE-Ec--cE
Confidence 468899999998762100 000011111111 11111111 0 122233 33 44
Q ss_pred EEE--eccCCeEEEEeccCCe----------------eEEEeecCccceEEEEEcCCCCeEEEEeCCCc-EEEecCCCCC
Q 021160 167 VMS--GSDCGHLFIWKKKGGK----------------LVRLMVGDRHVVNQLEPHPHIPMFATCGIEKT-VKLWAPMPTD 227 (316)
Q Consensus 167 l~~--~~~dg~v~~wd~~~~~----------------~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~-i~iwd~~~~~ 227 (316)
+++ |+.+|.|++||+.+++ .+..+.+|...|.+++|+|++++|++++.|++ |++||+++++
T Consensus 150 la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~ 229 (355)
T 3vu4_A 150 LVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGV 229 (355)
T ss_dssp EEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCC
T ss_pred EEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCc
Confidence 554 6889999999998765 26788899999999999999999999999998 9999999887
Q ss_pred -CCCCC-C-CcccceeeeecCCCCceeEEecCCCeEEEEEecccCcc---------------------------------
Q 021160 228 -FPPLP-D-NAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTL--------------------------------- 271 (316)
Q Consensus 228 -~~~~~-~-~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~~~--------------------------------- 271 (316)
+..+. + |...+..++ +++++.++++++.|+.+++|++......
T Consensus 230 ~~~~~~~g~h~~~v~~~~-~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (355)
T 3vu4_A 230 LVREFRRGLDRADVVDMK-WSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRG 308 (355)
T ss_dssp EEEEEECTTCCSCEEEEE-ECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCC
T ss_pred EEEEEEcCCCCCcEEEEE-ECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCc
Confidence 55665 4 777776666 8899999999999999999999754211
Q ss_pred eeEEeecccccccccCCCCeEEEEeccCCC
Q 021160 272 AYRERRYNAADFESDEEEGETYLLGFSDSD 301 (316)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 301 (316)
....+.+++..+.....+|++++|++..++
T Consensus 309 ~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~ 338 (355)
T 3vu4_A 309 CKIAWISESSLVVVWPHTRMIETFKVVFDD 338 (355)
T ss_dssp CEEEESSSSEEEEEETTTTEEEEEEEEEET
T ss_pred eEEEEeCCCCEEEEEeCCCeEEEEEEEcCC
Confidence 112466666677777778888888876544
No 111
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.96 E-value=1.7e-27 Score=204.84 Aligned_cols=223 Identities=16% Similarity=0.251 Sum_probs=180.4
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
+|.|+|||+.+.+....+. +|...+.++++++ .++++|+.|+.+++||.....
T Consensus 168 Dg~v~iWd~~~~~~~~~~~-----------~h~~~v~~~s~~~---~~l~sgs~d~~i~~~d~~~~~------------- 220 (420)
T 4gga_A 168 SAEVQLWDVQQQKRLRNMT-----------SHSARVGSLSWNS---YILSSGSRSGHIHHHDVRVAE------------- 220 (420)
T ss_dssp TSCEEEEETTTTEEEEEEC-----------CCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSS-------------
T ss_pred CCeEEEEEcCCCcEEEEEe-----------CCCCceEEEeeCC---CEEEEEeCCCceeEeeecccc-------------
Confidence 6899999998876544332 4788999998864 689999999999999998654
Q ss_pred cccccccCCCcccEEEEEEccCCCeEEE-ecCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEe
Q 021160 82 FCPRHLIGKNNIHITGLAYSNTSELLIS-YNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFF 160 (316)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~~~~~~~l~s-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 160 (316)
.......+|...+..+.|+|+++++++ +.|+.+++|+...+.. ....+.....|... |.+++|
T Consensus 221 -~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~------------~~~~~~~~~~~~~~--V~~~~~- 284 (420)
T 4gga_A 221 -HHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEG------------GWVPLQTFTQHQGA--VKAVAW- 284 (420)
T ss_dssp -CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSS------------CSCCSEEECCCSSC--EEEEEE-
T ss_pred -eeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccc------------cceeeeeecccCCc--eeeeee-
Confidence 222223788999999999999998888 4799999999987621 01234556677765 999999
Q ss_pred cCC-CcEEEE--eccCCeEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEe--CCCcEEEecCCCCC-CCCCCCC
Q 021160 161 GPN-DEYVMS--GSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCG--IEKTVKLWAPMPTD-FPPLPDN 234 (316)
Q Consensus 161 ~~~-~~~l~~--~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~--~d~~i~iwd~~~~~-~~~~~~~ 234 (316)
+|. ..++++ |+.|+.|++||+.+++++..+..| ..+.++.|+|+++.+++++ .|+.|+|||+.+++ +..+.+|
T Consensus 285 ~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~-~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH 363 (420)
T 4gga_A 285 CPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH-SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGH 363 (420)
T ss_dssp CTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECS-SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCC
T ss_pred CCCcccEEEEEeecCCCEEEEEeCCccccceeeccc-cceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCC
Confidence 564 455554 467999999999999999888765 5788999999999987765 79999999999887 7788899
Q ss_pred cccceeeeecCCCCceeEEecCCCeEEEEEecccC
Q 021160 235 AEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQ 269 (316)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~ 269 (316)
...|..++ +++++.++++++.|++|++|++.+..
T Consensus 364 ~~~V~~l~-~spdg~~l~S~s~D~tvriWdv~~~~ 397 (420)
T 4gga_A 364 TSRVLSLT-MSPDGATVASAAADETLRLWRCFELD 397 (420)
T ss_dssp SSCEEEEE-ECTTSSCEEEEETTTEEEEECCSCSS
T ss_pred CCCEEEEE-EcCCCCEEEEEecCCeEEEEECCCCC
Confidence 99987777 88999999999999999999987653
No 112
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.4e-27 Score=222.66 Aligned_cols=261 Identities=11% Similarity=0.098 Sum_probs=181.8
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
+|.|+|||+++.+....+. |...|++++|+|++ +++++|+.||.|++||++++++... .+..
T Consensus 78 D~~v~lWd~~~~~~~~~~~------------~~~~V~~v~~sp~g-~~l~sgs~dg~V~lwd~~~~~~~~~-----~i~~ 139 (902)
T 2oaj_A 78 KDTVYVLSLYSQKVLTTVF------------VPGKITSIDTDASL-DWMLIGLQNGSMIVYDIDRDQLSSF-----KLDN 139 (902)
T ss_dssp TCEEEEEETTTCSEEEEEE------------CSSCEEEEECCTTC-SEEEEEETTSCEEEEETTTTEEEEE-----EECC
T ss_pred cCeEEEEECCCCcEEEEEc------------CCCCEEEEEECCCC-CEEEEEcCCCcEEEEECCCCccccc-----eecc
Confidence 6889999998876544442 45689999999999 8999999999999999998763100 0000
Q ss_pred cccc-cccCCCcccEEEEEEccCC-CeEEE-ecCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCC----------
Q 021160 82 FCPR-HLIGKNNIHITGLAYSNTS-ELLIS-YNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGH---------- 148 (316)
Q Consensus 82 ~~~~-~~~~~~~~~i~~~~~~~~~-~~l~s-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 148 (316)
+... ....+|...|.+++|+|++ ..+++ +.|+.| +||++++ +..+.+..|
T Consensus 140 ~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~----------------~~~~~~~~~~~~g~~~~~~ 202 (902)
T 2oaj_A 140 LQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVEN----------------EIKQSFIYELPPFAPGGDF 202 (902)
T ss_dssp HHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTT----------------EEEEEECCCBCTTCCCSTT
T ss_pred ccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCC----------------ceEEEEecccCCcCCCccc
Confidence 0000 1236789999999999975 45666 479999 9999887 444445443
Q ss_pred --------cCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCeeEEE--ee---c-------------CccceEEEEE
Q 021160 149 --------RNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRL--MV---G-------------DRHVVNQLEP 202 (316)
Q Consensus 149 --------~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~--~~---~-------------~~~~v~~~~~ 202 (316)
... |.+++| +|++.+|++|+.||.|++||+++++++.. +. . |...|.+++|
T Consensus 203 ~~~~~~~h~~~--V~~v~f-spdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w 279 (902)
T 2oaj_A 203 SEKTNEKRTPK--VIQSLY-HPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYW 279 (902)
T ss_dssp CCCTTSCBCCC--EEEEEE-CTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEE
T ss_pred ccccccccCCC--eEEEEE-cCCCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEE
Confidence 333 999999 99999999999999999999999887653 21 1 3447889999
Q ss_pred c----CCC-CeEEEEeCC--------------------------------------------------------------
Q 021160 203 H----PHI-PMFATCGIE-------------------------------------------------------------- 215 (316)
Q Consensus 203 ~----p~~-~~l~s~~~d-------------------------------------------------------------- 215 (316)
+ |++ .++++|+.|
T Consensus 280 ~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~ 359 (902)
T 2oaj_A 280 MCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFA 359 (902)
T ss_dssp EECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHH
T ss_pred EecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcC
Confidence 5 433 335555433
Q ss_pred --------------CcEEEecCCCCC-CCC-------CCCCccccee---------------------------------
Q 021160 216 --------------KTVKLWAPMPTD-FPP-------LPDNAEKIMK--------------------------------- 240 (316)
Q Consensus 216 --------------~~i~iwd~~~~~-~~~-------~~~~~~~~~~--------------------------------- 240 (316)
+.|++|++.++. ... +..|...+..
T Consensus 360 g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~ 439 (902)
T 2oaj_A 360 GCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKR 439 (902)
T ss_dssp HTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCC
T ss_pred CCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCC
Confidence 334444443321 000 1111111111
Q ss_pred eeecCCCCceeEEecCCCeEEEEEecccCc--------------------ceeE-EeecccccccccCCCCeEEEEeccC
Q 021160 241 ANKQGREDHSRITLTPDVIMHVLRLQRRQT--------------------LAYR-ERRYNAADFESDEEEGETYLLGFSD 299 (316)
Q Consensus 241 ~~~~~~~~~~~~s~~~d~~~~~w~~~~~~~--------------------~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~ 299 (316)
...++++++++++++.|++|++||+..+.. .+.. .++|++..++++..+|+|.+|++..
T Consensus 440 sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~ 519 (902)
T 2oaj_A 440 QKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEV 519 (902)
T ss_dssp CCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEE
T ss_pred cccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecC
Confidence 112456788999999999999999876532 1222 7899999999999999999999987
Q ss_pred C
Q 021160 300 S 300 (316)
Q Consensus 300 ~ 300 (316)
+
T Consensus 520 ~ 520 (902)
T 2oaj_A 520 N 520 (902)
T ss_dssp C
T ss_pred c
Confidence 6
No 113
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=6.5e-28 Score=209.21 Aligned_cols=243 Identities=9% Similarity=0.039 Sum_probs=181.3
Q ss_pred ccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCc---ccCCCCCCCC--------------------------------
Q 021160 34 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCH---WYSPISSDTP-------------------------------- 78 (316)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~---~~~~~~~~~~-------------------------------- 78 (316)
..++.+++|+|+| ++|+++ .++.|++||+.+++ ..........
T Consensus 4 ~~p~~~v~~s~dg-~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (450)
T 2vdu_B 4 IHPLQNLLTSRDG-SLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKG 81 (450)
T ss_dssp ECCCCEEEECSSS-SEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC---------------------------------
T ss_pred cccEEEEEecCCC-CEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcC
Confidence 3478999999999 655555 57899999999887 3322111000
Q ss_pred --c-----eecccccccCCCcccEEEEEEccCCCeE-EEe-cCCcEEEEEcC--CCCCCCCccCCccccccCCCcceeeC
Q 021160 79 --V-----DTFCPRHLIGKNNIHITGLAYSNTSELL-ISY-NDELVYLFEKN--MGLGPSPLSLSPEDLQKREEPQVYSG 147 (316)
Q Consensus 79 --~-----~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~s~-~d~~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (316)
+ ...........|...|.+++|+|++++| +++ .|+.|++||+. ++ .....+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~----------------~~~~~~~~ 145 (450)
T 2vdu_B 82 DSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSK----------------NVLKLRKR 145 (450)
T ss_dssp ------------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSS----------------SCEEEEEE
T ss_pred ccccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCC----------------ceeeeeec
Confidence 0 0000000112456689999999999975 665 69999999998 66 56666663
Q ss_pred CcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCeeEE----EeecCccceEEEEEcCC---CCeEEEEeCCCcEEE
Q 021160 148 HRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVR----LMVGDRHVVNQLEPHPH---IPMFATCGIEKTVKL 220 (316)
Q Consensus 148 ~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~----~~~~~~~~v~~~~~~p~---~~~l~s~~~d~~i~i 220 (316)
+.....+.+++| +|++.+|++++.+|.+++|++.+++... .+.+|...|.+++|+|+ +++|++++.|+.|++
T Consensus 146 ~~~~~~v~~~~~-sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~v 224 (450)
T 2vdu_B 146 FCFSKRPNAISI-AEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKI 224 (450)
T ss_dssp EECSSCEEEEEE-CTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEE
T ss_pred ccCCCCceEEEE-cCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEE
Confidence 332234999999 9999999999999999999998877544 77789999999999999 999999999999999
Q ss_pred ecCCCCC-CCC-CCCCcccceeeeecCCCCceeEEecCCCeEEEEEecccCcceeE------------------------
Q 021160 221 WAPMPTD-FPP-LPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTLAYR------------------------ 274 (316)
Q Consensus 221 wd~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~~~~~~------------------------ 274 (316)
||++.+. +.. +.+|...+..+. ++ ++.++++++.|+.|++||+.+++.....
T Consensus 225 wd~~~~~~~~~~~~~h~~~v~~~~-~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (450)
T 2vdu_B 225 SHYPQCFIVDKWLFGHKHFVSSIC-CG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNEN 302 (450)
T ss_dssp EEESCTTCEEEECCCCSSCEEEEE-EC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC--------
T ss_pred EECCCCceeeeeecCCCCceEEEE-EC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccc
Confidence 9998876 333 557888887776 56 9999999999999999999876533222
Q ss_pred -----------EeecccccccccC-CCCeEEEEec
Q 021160 275 -----------ERRYNAADFESDE-EEGETYLLGF 297 (316)
Q Consensus 275 -----------~~~~~~~~~~~~~-~~~~v~~~~~ 297 (316)
.+.|+...+.... .++.|++|++
T Consensus 303 ~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 303 NDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp --CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred cccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 2334455565554 7888999999
No 114
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=3.1e-29 Score=216.10 Aligned_cols=220 Identities=9% Similarity=-0.001 Sum_probs=164.9
Q ss_pred CCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcc-----cEEEEEEccCCCe
Q 021160 32 MNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNI-----HITGLAYSNTSEL 106 (316)
Q Consensus 32 gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~i~~~~~~~~~~~ 106 (316)
+|...|.+++|+|+| .+||+++.||.|++||... +...+ . |.. .+.+++|+|+|++
T Consensus 83 ~~~~~V~~vawSPdG-~~LAs~s~dg~V~iwd~~~----------------~l~~l-~-~~~~~~~~sv~svafSPDG~~ 143 (588)
T 2j04_A 83 QPVCYPRVCKPSPID-DWMAVLSNNGNVSVFKDNK----------------MLTNL-D-SKGNLSSRTYHCFEWNPIESS 143 (588)
T ss_dssp SCSCCEEEEEECSSS-SCEEEEETTSCEEEEETTE----------------EEEEC-C-CSSCSTTTCEEEEEECSSSSC
T ss_pred CCCCcEEEEEECCCC-CEEEEEeCCCcEEEEeCCc----------------eeeec-c-CCCccccccEEEEEEcCCCCE
Confidence 467789999999999 8999999999999999542 11112 3 333 5999999999998
Q ss_pred EEEe-cCCcEEEEEcCCCCCCCCccCCccccccCCCccee----eCCcCCceeeeEEEecCCCcEEEEeccCCeEEEEec
Q 021160 107 LISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVY----SGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKK 181 (316)
Q Consensus 107 l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~ 181 (316)
|+++ .||+|++||+..+.-.. ++.-.+..+ .+|... |.+++| +|+| +++++.|+.|++|++
T Consensus 144 LAsgs~DGtVkIWd~~~~~l~~---------~~~i~l~ti~~~~~gh~~~--V~sVaw-SPdg--Laass~D~tVrlWd~ 209 (588)
T 2j04_A 144 IVVGNEDGELQFFSIRKNSENT---------PEFYFESSIRLSDAGSKDW--VTHIVW-YEDV--LVAALSNNSVFSMTV 209 (588)
T ss_dssp EEEEETTSEEEEEECCCCTTTC---------CCCEEEEEEECSCTTCCCC--EEEEEE-ETTE--EEEEETTCCEEEECC
T ss_pred EEEEcCCCEEEEEECCCCcccc---------ccceeeeeeeccccccccc--EEEEEE-cCCc--EEEEeCCCeEEEEEC
Confidence 8885 79999999998761000 000013555 556655 999999 8998 788888999999999
Q ss_pred cCCee---EEEe-ecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCCC-CCCCCCcccceeeeec--CCCCceeEEe
Q 021160 182 KGGKL---VRLM-VGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLPDNAEKIMKANKQ--GREDHSRITL 254 (316)
Q Consensus 182 ~~~~~---~~~~-~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~s~ 254 (316)
..++. ...+ .+|...|.+++|+ +..||+++ +++|++||+.+++. ....+|...+..+. + ++++..++++
T Consensus 210 ~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va-~~~s~d~~~La~a 285 (588)
T 2j04_A 210 SASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIP-LNHEKESTILLMS 285 (588)
T ss_dssp CSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEE-ETTCSSCEEEEEC
T ss_pred CCCccccceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEE-eeeCCCCCEEEEE
Confidence 87773 3566 4788899999999 68899887 79999999998875 33337888887766 6 7788889999
Q ss_pred cCCCeEEEEEecccCcceeEEeecccccccccCCCCeEEEEec
Q 021160 255 TPDVIMHVLRLQRRQTLAYRERRYNAADFESDEEEGETYLLGF 297 (316)
Q Consensus 255 ~~d~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 297 (316)
..+|. ++|.+.. ..++|+...+++. ++++++|+.
T Consensus 286 ~edG~-klw~~d~------~~~spd~~l~a~~--d~~v~lW~~ 319 (588)
T 2j04_A 286 NKTSY-KVLLEDE------LHVTADNIIAPYL--EKKFKKWST 319 (588)
T ss_dssp SSCEE-EEEESSS------EEEECCCSSHHHH--HHHHHHTTT
T ss_pred cCCCC-EEEeecc------EEECCCceEEEEc--CCEEEEEEC
Confidence 99999 9999761 1255555555543 444555544
No 115
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.3e-27 Score=205.97 Aligned_cols=227 Identities=10% Similarity=0.060 Sum_probs=165.1
Q ss_pred ccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCc-----------eecc------cccccCCCcccEE
Q 021160 34 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPV-----------DTFC------PRHLIGKNNIHIT 96 (316)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~-----------~~~~------~~~~~~~~~~~i~ 96 (316)
...|.+++|+|+| +++|+++.|++|+ |...++.... ++..+ ..+. ...+...|...|.
T Consensus 15 ~~~v~sv~~SpDG-~~iASas~D~TV~--d~~~~~~l~g--h~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~ 89 (588)
T 2j04_A 15 EDWKNNLTWARDG-TLYLTTFPDISIG--QPKYAKDINC--NSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPR 89 (588)
T ss_dssp SSSSCCEEECTTS-CEEEECSSSEEEE--EECCCSCCSS--BGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEE
T ss_pred hccEEEEEECCCC-CEEEEEcCCceee--cccccceecC--CCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEE
Confidence 5689999999999 8999999999998 6555543210 00000 0000 0111124578899
Q ss_pred EEEEccCCCeEEE-ecCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcC---CceeeeEEEecCCCcEEEEecc
Q 021160 97 GLAYSNTSELLIS-YNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRN---SQTVKGVNFFGPNDEYVMSGSD 172 (316)
Q Consensus 97 ~~~~~~~~~~l~s-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~~l~~~~~ 172 (316)
+++|+|+|..|++ +.||.|++||.+. .+..+. |.. ...+.+++| +|+|++|++|+.
T Consensus 90 ~vawSPdG~~LAs~s~dg~V~iwd~~~------------------~l~~l~-~~~~~~~~sv~svaf-SPDG~~LAsgs~ 149 (588)
T 2j04_A 90 VCKPSPIDDWMAVLSNNGNVSVFKDNK------------------MLTNLD-SKGNLSSRTYHCFEW-NPIESSIVVGNE 149 (588)
T ss_dssp EEEECSSSSCEEEEETTSCEEEEETTE------------------EEEECC-CSSCSTTTCEEEEEE-CSSSSCEEEEET
T ss_pred EEEECCCCCEEEEEeCCCcEEEEeCCc------------------eeeecc-CCCccccccEEEEEE-cCCCCEEEEEcC
Confidence 9999999998888 5899999999532 333344 332 123999999 999999999999
Q ss_pred CCeEEEEeccCCee-------EEEe----ecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCCCCC----C-CCCcc
Q 021160 173 CGHLFIWKKKGGKL-------VRLM----VGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPP----L-PDNAE 236 (316)
Q Consensus 173 dg~v~~wd~~~~~~-------~~~~----~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~~~~----~-~~~~~ 236 (316)
||+|++||+.+++. +..+ .+|...|.+++|+|++ +++++.|++|++|++.++...+ + .+|..
T Consensus 150 DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~ 227 (588)
T 2j04_A 150 DGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRR 227 (588)
T ss_dssp TSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSS
T ss_pred CCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccC
Confidence 99999999998753 5666 5677899999999999 8888899999999998877543 5 35667
Q ss_pred cceeeeecCCCCceeEEecCCCeEEEEEecccCcceeE----------Ee--ecccccccccCCCCe
Q 021160 237 KIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTLAYR----------ER--RYNAADFESDEEEGE 291 (316)
Q Consensus 237 ~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~~~~~~----------~~--~~~~~~~~~~~~~~~ 291 (316)
.+..+++ + +..+++++ ++.|++|++..++...+. .+ +|++..++...++|.
T Consensus 228 ~V~svaF-s--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~ 290 (588)
T 2j04_A 228 KITDLKI-V--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY 290 (588)
T ss_dssp CCCCEEE-E--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE
T ss_pred cEEEEEE-E--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC
Confidence 7777774 4 46788776 699999998876553332 33 555555555555555
No 116
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.1e-28 Score=228.11 Aligned_cols=198 Identities=10% Similarity=0.095 Sum_probs=162.6
Q ss_pred CCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEE-e
Q 021160 32 MNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLIS-Y 110 (316)
Q Consensus 32 gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s-~ 110 (316)
||...|++++|+|++ .+||+|+.||.|++|+....+. ... ..|...|.+++|+| +++|++ +
T Consensus 15 gh~~~V~~lafspdg-~~lAsgs~Dg~I~lw~~~~~~~--------------~~~--~~~~~~V~~l~fsp-g~~L~S~s 76 (902)
T 2oaj_A 15 GMSSKPIAAAFDFTQ-NLLAIATVTGEVHIYGQQQVEV--------------VIK--LEDRSAIKEMRFVK-GIYLVVIN 76 (902)
T ss_dssp ECSSCEEEEEEETTT-TEEEEEETTSEEEEECSTTCEE--------------EEE--CSSCCCEEEEEEET-TTEEEEEE
T ss_pred CCCCCcEEEEECCCC-CEEEEEeCCCEEEEEeCCCcEE--------------EEE--cCCCCCEEEEEEcC-CCEEEEEE
Confidence 588999999999999 8999999999999999876641 111 34678999999999 887777 5
Q ss_pred cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCeeE---
Q 021160 111 NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLV--- 187 (316)
Q Consensus 111 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~--- 187 (316)
.|++|++||+.++ +.+..+. +... |++++| +|+++++++|+.||.|++||++++++.
T Consensus 77 ~D~~v~lWd~~~~----------------~~~~~~~-~~~~--V~~v~~-sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~ 136 (902)
T 2oaj_A 77 AKDTVYVLSLYSQ----------------KVLTTVF-VPGK--ITSIDT-DASLDWMLIGLQNGSMIVYDIDRDQLSSFK 136 (902)
T ss_dssp TTCEEEEEETTTC----------------SEEEEEE-CSSC--EEEEEC-CTTCSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred CcCeEEEEECCCC----------------cEEEEEc-CCCC--EEEEEE-CCCCCEEEEEcCCCcEEEEECCCCccccce
Confidence 7999999999887 5666665 4444 999999 999999999999999999999988764
Q ss_pred --------EEeecCccceEEEEEcCCC-CeEEEEeCCCcEEEecCCCCC-CCCCCC------------------Ccccce
Q 021160 188 --------RLMVGDRHVVNQLEPHPHI-PMFATCGIEKTVKLWAPMPTD-FPPLPD------------------NAEKIM 239 (316)
Q Consensus 188 --------~~~~~~~~~v~~~~~~p~~-~~l~s~~~d~~i~iwd~~~~~-~~~~~~------------------~~~~~~ 239 (316)
..+.+|.+.|.+++|+|++ ..+++++.|+.| +||++.++ ...+.. |...+.
T Consensus 137 i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~ 215 (902)
T 2oaj_A 137 LDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVI 215 (902)
T ss_dssp ECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEE
T ss_pred eccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeE
Confidence 2235688999999999964 679999999999 99998875 322322 234555
Q ss_pred eeeecCCCCceeEEecCCCeEEEEEecccC
Q 021160 240 KANKQGREDHSRITLTPDVIMHVLRLQRRQ 269 (316)
Q Consensus 240 ~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~ 269 (316)
.+. |++++.++++++.|+.|++||+.+++
T Consensus 216 ~v~-fspdg~~lasgs~Dg~i~lWd~~~g~ 244 (902)
T 2oaj_A 216 QSL-YHPNSLHIITIHEDNSLVFWDANSGH 244 (902)
T ss_dssp EEE-ECTTSSEEEEEETTCCEEEEETTTCC
T ss_pred EEE-EcCCCCEEEEEECCCeEEEEECCCCc
Confidence 555 88999999999999999999997654
No 117
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.96 E-value=1.6e-27 Score=200.77 Aligned_cols=207 Identities=13% Similarity=0.153 Sum_probs=161.2
Q ss_pred CCCccceEEEEECCCC--CcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEE
Q 021160 31 PMNSIRLNAIVIDPRN--PNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLI 108 (316)
Q Consensus 31 ~gh~~~v~~~~~~~~~--~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 108 (316)
.+|...|++++|+|++ +.+|++|+.||.|++||+.+... .......+|...|.+++|+|++++|+
T Consensus 36 ~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~-------------~~~~~~~~h~~~v~~~~~~~~~~~l~ 102 (368)
T 3mmy_A 36 SSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQ-------------TIPKAQQMHTGPVLDVCWSDDGSKVF 102 (368)
T ss_dssp SCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSC-------------EEEEEEEECSSCEEEEEECTTSSEEE
T ss_pred cCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCc-------------eeEEEeccccCCEEEEEECcCCCEEE
Confidence 4799999999999983 38999999999999999987320 22223367899999999999999888
Q ss_pred Ee-cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEe-cCCCcEEEEeccCCeEEEEeccCCee
Q 021160 109 SY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFF-GPNDEYVMSGSDCGHLFIWKKKGGKL 186 (316)
Q Consensus 109 s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~l~~~~~dg~v~~wd~~~~~~ 186 (316)
++ .|+.|++||+.++ ... .+..|... |.+++|. ++++.+|++++.||.|++||+++++.
T Consensus 103 s~~~dg~v~iwd~~~~----------------~~~-~~~~~~~~--v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 163 (368)
T 3mmy_A 103 TASCDKTAKMWDLSSN----------------QAI-QIAQHDAP--VKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNP 163 (368)
T ss_dssp EEETTSEEEEEETTTT----------------EEE-EEEECSSC--EEEEEEEECSSCEEEEEEETTSEEEEECSSCSSC
T ss_pred EEcCCCcEEEEEcCCC----------------Cce-eeccccCc--eEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcE
Confidence 85 7999999999887 333 35667765 9999973 67889999999999999999998877
Q ss_pred EEEeecCc-----------------------------------------cceEEEEEcCCCCe----EEEEeCCCcEEEe
Q 021160 187 VRLMVGDR-----------------------------------------HVVNQLEPHPHIPM----FATCGIEKTVKLW 221 (316)
Q Consensus 187 ~~~~~~~~-----------------------------------------~~v~~~~~~p~~~~----l~s~~~d~~i~iw 221 (316)
+..+..+. ..+.++++.++... +++++.|+.|++|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~ 243 (368)
T 3mmy_A 164 MMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIH 243 (368)
T ss_dssp SEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEE
T ss_pred EEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEE
Confidence 66665432 22344444444433 9999999999999
Q ss_pred cCCCCC----CCCCCCCcc------------cceeeeecCCCCceeEEecCCCeEEEEEecccCc
Q 021160 222 APMPTD----FPPLPDNAE------------KIMKANKQGREDHSRITLTPDVIMHVLRLQRRQT 270 (316)
Q Consensus 222 d~~~~~----~~~~~~~~~------------~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~~ 270 (316)
+++... ...+..|.. .+..+. +++++.++++++.|+.|++||+.+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~sp~~~~l~s~~~dg~i~iwd~~~~~~ 307 (368)
T 3mmy_A 244 YINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIA-FHPVHGTLATVGSDGRFSFWDKDARTK 307 (368)
T ss_dssp ESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEE-ECTTTCCEEEEETTSCEEEEETTTTEE
T ss_pred ecCCCCccccceeeeeeecccccccccccccceEEEE-EecCCCEEEEEccCCeEEEEECCCCcE
Confidence 998763 444445554 454554 888999999999999999999987643
No 118
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=3.8e-28 Score=206.97 Aligned_cols=228 Identities=9% Similarity=0.044 Sum_probs=155.7
Q ss_pred ccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEcc--------CCC
Q 021160 34 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSN--------TSE 105 (316)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--------~~~ 105 (316)
...+....+.+++ .++++|+.|++|+|||+++++.. .........+|...|.+++|+| +++
T Consensus 89 ~~~~~~~~~~~~~-~~las~~~d~~v~lw~~~~~~~~----------~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~ 157 (393)
T 4gq1_A 89 DGDGNVNSSPVYS-LFLACVCQDNTVRLIITKNETII----------TQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQ 157 (393)
T ss_dssp --------CCEEE-EEEEEEETTSCEEEEEEETTEEE----------EEEEECTTTSCSSCEEEEEEEEEECTTCSEEEE
T ss_pred CCCcceeecCCCC-CEEEEEeCCCcEEEEECCCCccc----------eeeeecccCCCCCceEEEEEccccccccCCCCC
Confidence 3333334444444 78999999999999999987521 1112233489999999999998 778
Q ss_pred eEEEe-cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCC-cEEEEeccCCeEEEEeccC
Q 021160 106 LLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPND-EYVMSGSDCGHLFIWKKKG 183 (316)
Q Consensus 106 ~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~l~~~~~dg~v~~wd~~~ 183 (316)
+|+++ .|++|+|||+.++ .....+.+|... +.+++| +|++ .+|++++.|+.|++||+.+
T Consensus 158 ~las~s~D~tv~~Wd~~~~----------------~~~~~~~~~~~~--v~~v~~-~p~~~~~l~~~~~d~~v~~wd~~t 218 (393)
T 4gq1_A 158 VIASVGDDCTLIIWRLTDE----------------GPILAGYPLSSP--GISVQF-RPSNPNQLIVGERNGNIRIFDWTL 218 (393)
T ss_dssp EEEEEETTSEEEEEEEETT----------------EEEEEEEECSSC--EEEEEE-ETTEEEEEEEEETTSEEEEEETTC
T ss_pred EEEEEECCCeEEEEECCCC----------------ceeeeecCCCCC--cEEEEE-CCCCCceEEecCCCCEEEEEECCC
Confidence 99985 7999999999876 466667777766 999999 7876 5899999999999999987
Q ss_pred CeeEEE-------------------------eecCccceEEEEEc-CCCCeEEEEeCCCcEEEecCCCCC-CCCCCCCcc
Q 021160 184 GKLVRL-------------------------MVGDRHVVNQLEPH-PHIPMFATCGIEKTVKLWAPMPTD-FPPLPDNAE 236 (316)
Q Consensus 184 ~~~~~~-------------------------~~~~~~~v~~~~~~-p~~~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~~ 236 (316)
++.... ..+|...+.+++|+ |+++.|++++.|+.+++||+.... ...+..+..
T Consensus 219 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~ 298 (393)
T 4gq1_A 219 NLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTM 298 (393)
T ss_dssp CC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC--------------
T ss_pred CcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecC
Confidence 764332 23566788899986 799999999999999999998665 333332222
Q ss_pred cc------------------eeeeecCC-CCceeEEecCCCeEEEEEecccCcce---------eE-EeecccccccccC
Q 021160 237 KI------------------MKANKQGR-EDHSRITLTPDVIMHVLRLQRRQTLA---------YR-ERRYNAADFESDE 287 (316)
Q Consensus 237 ~~------------------~~~~~~~~-~~~~~~s~~~d~~~~~w~~~~~~~~~---------~~-~~~~~~~~~~~~~ 287 (316)
.+ ....++++ ++.++++++.|+.|++||+.+++... .. .+.|++..++...
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as 378 (393)
T 4gq1_A 299 KLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIAT 378 (393)
T ss_dssp -----CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEE
T ss_pred ccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEe
Confidence 11 11222223 45567889999999999998764332 22 6888888888877
Q ss_pred CCCe
Q 021160 288 EEGE 291 (316)
Q Consensus 288 ~~~~ 291 (316)
++|.
T Consensus 379 ~~Gv 382 (393)
T 4gq1_A 379 EGSV 382 (393)
T ss_dssp SSEE
T ss_pred CCCe
Confidence 6664
No 119
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.96 E-value=1.1e-26 Score=197.72 Aligned_cols=250 Identities=7% Similarity=0.010 Sum_probs=188.4
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
+|.|++||+.+.+....+.. ...+.+++|+|++..++++++.|+.|++||+.+++.
T Consensus 11 d~~v~v~d~~~~~~~~~~~~------------~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~------------ 66 (391)
T 1l0q_A 11 SDNISVIDVTSNKVTATIPV------------GSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNV------------ 66 (391)
T ss_dssp TTEEEEEETTTTEEEEEEEC------------SSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEE------------
T ss_pred CCEEEEEECCCCeEEEEeec------------CCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeE------------
Confidence 58999999988765544432 235899999999943457778999999999998873
Q ss_pred cccccccCCCcccEEEEEEccCCCeEE-Ee-cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEE
Q 021160 82 FCPRHLIGKNNIHITGLAYSNTSELLI-SY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNF 159 (316)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~~~~~~~l~-s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 159 (316)
...+ .. ...+.+++|+|++++++ ++ .++.|++||+.++ +....+..+. . +.+++|
T Consensus 67 --~~~~-~~-~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~----------------~~~~~~~~~~-~--~~~~~~ 123 (391)
T 1l0q_A 67 --IATV-PA-GSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSN----------------TVAGTVKTGK-S--PLGLAL 123 (391)
T ss_dssp --EEEE-EC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT----------------EEEEEEECSS-S--EEEEEE
T ss_pred --EEEE-EC-CCCccceEECCCCCEEEEEECCCCEEEEEECCCC----------------eEEEEEeCCC-C--cceEEE
Confidence 2222 22 23899999999999664 45 5799999999887 5556665443 3 899999
Q ss_pred ecCCCcEE-EEeccCCeEEEEeccCCeeEEEeecCccceEEEEEcCCCCeE-EEEeCCCcEEEecCCCCCCCCCCCCccc
Q 021160 160 FGPNDEYV-MSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMF-ATCGIEKTVKLWAPMPTDFPPLPDNAEK 237 (316)
Q Consensus 160 ~~~~~~~l-~~~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 237 (316)
+|+++++ ++++.++.|++||+.+++.+..+..+. .+..++|+|+++.+ ++++.|+.|++||+++++......+...
T Consensus 124 -s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~ 201 (391)
T 1l0q_A 124 -SPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGR-SPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAA 201 (391)
T ss_dssp -CTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSE
T ss_pred -CCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCC-CcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCC
Confidence 9999977 788889999999999999988887664 56899999999886 6778899999999988763322223444
Q ss_pred ceeeeecCCCCceeEEec---CCCeEEEEEecccCcce---------eEEeecccccc-cccCCCCeEEEEeccCCC
Q 021160 238 IMKANKQGREDHSRITLT---PDVIMHVLRLQRRQTLA---------YRERRYNAADF-ESDEEEGETYLLGFSDSD 301 (316)
Q Consensus 238 ~~~~~~~~~~~~~~~s~~---~d~~~~~w~~~~~~~~~---------~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~ 301 (316)
+..+. +++++.++++++ .++.+++||+.+++... ...+.|++..+ .+...++++.+||...+.
T Consensus 202 ~~~~~-~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~ 277 (391)
T 1l0q_A 202 PSGIA-VNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNT 277 (391)
T ss_dssp EEEEE-ECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred ccceE-ECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCCCccEEEEccCCCEEEEEcCCCCEEEEEECCCCc
Confidence 44444 778888777776 78999999987653221 12567777666 566778899999987654
No 120
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.4e-27 Score=198.41 Aligned_cols=196 Identities=8% Similarity=0.016 Sum_probs=148.4
Q ss_pred CCccceEEEEECC--CCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEE
Q 021160 32 MNSIRLNAIVIDP--RNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLIS 109 (316)
Q Consensus 32 gh~~~v~~~~~~~--~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s 109 (316)
+|..+|.+++|+| ++ .++++|+.||.|++||+++++ +.......|...+.+++|+|++.+|++
T Consensus 123 ~~~~~v~~~~~~~~~~~-~~l~s~s~dg~i~~wd~~~~~--------------~~~~~~~~~~~~i~~~~~~pdg~~las 187 (343)
T 3lrv_A 123 DSANEIIYMYGHNEVNT-EYFIWADNRGTIGFQSYEDDS--------------QYIVHSAKSDVEYSSGVLHKDSLLLAL 187 (343)
T ss_dssp CCSSCEEEEECCC---C-CEEEEEETTCCEEEEESSSSC--------------EEEEECCCSSCCCCEEEECTTSCEEEE
T ss_pred CCCCCEEEEEcCCCCCC-CEEEEEeCCCcEEEEECCCCc--------------EEEEEecCCCCceEEEEECCCCCEEEE
Confidence 3678999999999 88 899999999999999999876 222222345667999999999999998
Q ss_pred e-cCCcEEEEEcCCCCCCCCccCCccccccCCCc-ceeeC-CcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCee
Q 021160 110 Y-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEP-QVYSG-HRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKL 186 (316)
Q Consensus 110 ~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~ 186 (316)
+ .|+.|++||++++ +.. ..+.. |... |.+++| +|++.+|+++++ +.|++||+++++.
T Consensus 188 g~~dg~i~iwd~~~~----------------~~~~~~~~~~h~~~--v~~l~f-s~~g~~l~s~~~-~~v~iwd~~~~~~ 247 (343)
T 3lrv_A 188 YSPDGILDVYNLSSP----------------DQASSRFPVDEEAK--IKEVKF-ADNGYWMVVECD-QTVVCFDLRKDVG 247 (343)
T ss_dssp ECTTSCEEEEESSCT----------------TSCCEECCCCTTSC--EEEEEE-CTTSSEEEEEES-SBEEEEETTSSTT
T ss_pred EcCCCEEEEEECCCC----------------CCCccEEeccCCCC--EEEEEE-eCCCCEEEEEeC-CeEEEEEcCCCCc
Confidence 5 7999999999987 454 66777 7766 999999 999999999995 5999999998876
Q ss_pred EEEeec---CccceE--EEEEcCCCCeEEEEeC-CCcEEEecCCCCCCCCCCCCcccceeeeecCC---CCceeEEecCC
Q 021160 187 VRLMVG---DRHVVN--QLEPHPHIPMFATCGI-EKTVKLWAPMPTDFPPLPDNAEKIMKANKQGR---EDHSRITLTPD 257 (316)
Q Consensus 187 ~~~~~~---~~~~v~--~~~~~p~~~~l~s~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~s~~~d 257 (316)
+..+.. |...+. +++|+|++++|++++. |+.|++|++...... .. ..++ ....+.+ +...+++++.|
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~-~~--~~~~-~~~~~~~~~~~~~~l~~~~~d 323 (343)
T 3lrv_A 248 TLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKN-WT--KDEE-SALCLQSDTADFTDMDVVCGD 323 (343)
T ss_dssp CBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCS-EE--EEEE-EECCC----CCCCEEEEEEET
T ss_pred ceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccc-eE--ecCc-eeEecCccccccceeEEEecC
Confidence 555443 333343 6999999999999988 999999998654311 00 0222 2233554 67788899999
Q ss_pred CeEEEEEec
Q 021160 258 VIMHVLRLQ 266 (316)
Q Consensus 258 ~~~~~w~~~ 266 (316)
+.+.++-..
T Consensus 324 ~~~~~~~~~ 332 (343)
T 3lrv_A 324 GGIAAILKT 332 (343)
T ss_dssp TEEEEEEEC
T ss_pred CceEEEEec
Confidence 998887533
No 121
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.96 E-value=4.2e-26 Score=191.69 Aligned_cols=232 Identities=15% Similarity=0.123 Sum_probs=163.0
Q ss_pred eeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecc
Q 021160 4 FNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFC 83 (316)
Q Consensus 4 ~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~ 83 (316)
.++|||+.+.+. ..... ...+..+++.+.+..++++|+.|+.|++||+.+++...
T Consensus 41 ~~~iw~~~~~~~--~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~------------ 95 (355)
T 3vu4_A 41 SFEIYNVHPVAH--IMSQE-----------MRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVS------------ 95 (355)
T ss_dssp EEEEEEETTEEE--EEEEE-----------CSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEE------------
T ss_pred EEEEEecCCcce--eeeee-----------cCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEE------------
Confidence 478999875433 22211 22477888888873444678889999999999887332
Q ss_pred cccccCCCcccEEEEEEccCCCeEEEecCCcEEEEEcCCC-C-----------------------CCCCccCCccccccC
Q 021160 84 PRHLIGKNNIHITGLAYSNTSELLISYNDELVYLFEKNMG-L-----------------------GPSPLSLSPEDLQKR 139 (316)
Q Consensus 84 ~~~~~~~~~~~i~~~~~~~~~~~l~s~~d~~i~iwd~~~~-~-----------------------~~~~~~~~~~~~~~~ 139 (316)
.+ .+...|.+++++++. ++.+.|+.|++||+.+. . +.....+.++++.+.
T Consensus 96 --~~--~~~~~v~~v~~~~~~--~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~ 169 (355)
T 3vu4_A 96 --RI--KVDAPVKDLFLSREF--IVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSS 169 (355)
T ss_dssp --EE--ECSSCEEEEEECSSE--EEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC-
T ss_pred --EE--ECCCceEEEEEcCCE--EEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEEECCCC
Confidence 11 134467777776542 33334566666666554 1 122223333444332
Q ss_pred C---------------C-cceeeCCcCCceeeeEEEecCCCcEEEEeccCCe-EEEEeccCCeeEEEee-c-CccceEEE
Q 021160 140 E---------------E-PQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGH-LFIWKKKGGKLVRLMV-G-DRHVVNQL 200 (316)
Q Consensus 140 ~---------------~-~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~-v~~wd~~~~~~~~~~~-~-~~~~v~~~ 200 (316)
. + ...+.+|... |.+++| +|++.+|++|+.|++ |++||+++++++..+. + |...|.++
T Consensus 170 ~~~~~~~~~~~~~~~~p~~~~~~~h~~~--v~~~~~-s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~ 246 (355)
T 3vu4_A 170 GSATTQDQGVQQKAILGKGVLIKAHTNP--IKMVRL-NRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDM 246 (355)
T ss_dssp -----------------CCEEECCCSSC--EEEEEE-CTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEE
T ss_pred CccccccccccccccCcccEEEEccCCc--eEEEEE-CCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEE
Confidence 2 2 6778899876 999999 999999999999998 9999999999999998 5 99999999
Q ss_pred EEcCCCCeEEEEeCCCcEEEecCCCCCCC---CCCC--------------------CcccceeeeecCCCCceeEEecCC
Q 021160 201 EPHPHIPMFATCGIEKTVKLWAPMPTDFP---PLPD--------------------NAEKIMKANKQGREDHSRITLTPD 257 (316)
Q Consensus 201 ~~~p~~~~l~s~~~d~~i~iwd~~~~~~~---~~~~--------------------~~~~~~~~~~~~~~~~~~~s~~~d 257 (316)
+|+|++++|++++.|++|++||++..... .+.. ..........|++++..+++++.|
T Consensus 247 ~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~d 326 (355)
T 3vu4_A 247 KWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHT 326 (355)
T ss_dssp EECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTT
T ss_pred EECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCC
Confidence 99999999999999999999999765311 1111 000001334488899999999999
Q ss_pred CeEEEEEecccC
Q 021160 258 VIMHVLRLQRRQ 269 (316)
Q Consensus 258 ~~~~~w~~~~~~ 269 (316)
|.+++|++..++
T Consensus 327 g~~~~~~~~~~~ 338 (355)
T 3vu4_A 327 RMIETFKVVFDD 338 (355)
T ss_dssp TEEEEEEEEEET
T ss_pred CeEEEEEEEcCC
Confidence 999999987653
No 122
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=1.9e-27 Score=193.05 Aligned_cols=175 Identities=7% Similarity=-0.011 Sum_probs=131.4
Q ss_pred ceeeEEEEeeC-CCcceEEEeccccccccCCCCccceEEEEECC---CCCcEEEEEecCCcEEEEeCcCCcccCCCCCCC
Q 021160 2 VLFNMLFDLRS-DSATRLFYCSSFSENSKQPMNSIRLNAIVIDP---RNPNYFAVGGSDEYARVYDIRKCHWYSPISSDT 77 (316)
Q Consensus 2 ~g~v~vwd~~~-~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~---~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~ 77 (316)
++.|++|++.. .+....+.. |...++.++|+| ++ .+|++|+.|++|+|||+++++
T Consensus 156 d~~V~~~~~s~dG~~~~s~~~-----------~~~~v~~l~fs~~~g~~-~~LaSgS~D~TIkIWDl~TGk--------- 214 (356)
T 2w18_A 156 DQQVEVMTFAEDGGGKENQFL-----------MPPEETILTFAEVQGMQ-EALLGTTIMNNIVIWNLKTGQ--------- 214 (356)
T ss_dssp TCEEEEEEECTTSCEEEEEEE-----------CCCSSCEEEEEEEETST-TEEEEEETTSEEEEEETTTCC---------
T ss_pred CCcEEEEEECCCCceeeeecc-----------CCCceeeEEeeccCCCC-ceEEEecCCCcEEEEECCCCc---------
Confidence 56788888854 333333332 677788888888 55 899999999999999999998
Q ss_pred CceecccccccCC--CcccEEEEEEccCCCeE------------EEe-cCCcEEEEEcCCCCCCCCccCCccccccCCCc
Q 021160 78 PVDTFCPRHLIGK--NNIHITGLAYSNTSELL------------ISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEP 142 (316)
Q Consensus 78 ~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l------------~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 142 (316)
+...+..+ +...+.+++|+|+|.++ +++ .|++|++||..++ +.+
T Consensus 215 -----~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tg----------------k~l 273 (356)
T 2w18_A 215 -----LLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTT----------------LSV 273 (356)
T ss_dssp -----EEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTT----------------EEE
T ss_pred -----EEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCC----------------EEE
Confidence 34444222 23468888999999865 343 5899999999887 444
Q ss_pred cee-----eCCcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCeeEEEeecCccceE-EEEEcCCCCeEEEEeCCC
Q 021160 143 QVY-----SGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVN-QLEPHPHIPMFATCGIEK 216 (316)
Q Consensus 143 ~~~-----~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~~~~v~-~~~~~p~~~~l~s~~~d~ 216 (316)
..+ .+|... +.+..+ ++.++++++.|++|+|||+.+++++.++.+|...+. .++|+|++++|++|+.|+
T Consensus 274 ~v~~~~~p~Gh~~~--~lsg~~---sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~ 348 (356)
T 2w18_A 274 GVMLYCLPPGQAGR--FLEGDV---KDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDG 348 (356)
T ss_dssp EEEEECCCTTCCCC--EEEEEE---ETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTS
T ss_pred EEEEeeccCCCcce--eEcccc---CCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCC
Confidence 433 245433 444444 388999999999999999999999999999987655 589999999999999999
Q ss_pred cEEEecC
Q 021160 217 TVKLWAP 223 (316)
Q Consensus 217 ~i~iwd~ 223 (316)
+|+|||+
T Consensus 349 TIklWd~ 355 (356)
T 2w18_A 349 NIFVYHY 355 (356)
T ss_dssp CEEEEEE
T ss_pred cEEEecC
Confidence 9999985
No 123
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.95 E-value=1.8e-25 Score=184.65 Aligned_cols=222 Identities=16% Similarity=0.244 Sum_probs=174.2
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
+|.|++||+++.+....+. +|...+.++.+.+ .++++|+.++.+++|+.....
T Consensus 88 Dg~v~iw~~~~~~~~~~~~-----------~h~~~~~~~~~~~---~~l~s~~~~~~~~~~~~~~~~------------- 140 (318)
T 4ggc_A 88 SAEVQLWDVQQQKRLRNMT-----------SHSARVGSLSWNS---YILSSGSRSGHIHHHDVRVAE------------- 140 (318)
T ss_dssp TSEEEEEETTTTEEEEEEE-----------CCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSS-------------
T ss_pred CCcEEEeecCCceeEEEec-----------CccceEEEeecCC---CEEEEEecCCceEeeecCCCc-------------
Confidence 6899999999877655544 3677787776654 689999999999999988765
Q ss_pred cccccccCCCcccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEe
Q 021160 82 FCPRHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFF 160 (316)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 160 (316)
.......+|...+..+.+.+++++++++ .|+.|++||++++.. ..........+... +.++++
T Consensus 141 -~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~------------~~~~~~~~~~~~~~--v~~~~~- 204 (318)
T 4ggc_A 141 -HHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEG------------GWVPLQTFTQHQGA--VKAVAW- 204 (318)
T ss_dssp -CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTT------------BSCCSEEECCCCSC--EEEEEE-
T ss_pred -eeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcc------------cccceeeecccCCc--eEEEEe-
Confidence 2222336889999999999999988885 799999999987621 00123334455544 899998
Q ss_pred cCCCc-EE--EEeccCCeEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEe--CCCcEEEecCCCCC-CCCCCCC
Q 021160 161 GPNDE-YV--MSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCG--IEKTVKLWAPMPTD-FPPLPDN 234 (316)
Q Consensus 161 ~~~~~-~l--~~~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~--~d~~i~iwd~~~~~-~~~~~~~ 234 (316)
.+.+. .+ ++++.++.|++||........... +...+..++|+|+++.+++++ .|+.|++||+++++ +.++.+|
T Consensus 205 ~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH 283 (318)
T 4ggc_A 205 CPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGH 283 (318)
T ss_dssp CTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCC
T ss_pred cCCCCcEEEEEecCCCCEEEEEeccccccccccc-ceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCC
Confidence 66554 33 467789999999999887765554 567899999999999877654 79999999999887 7788899
Q ss_pred cccceeeeecCCCCceeEEecCCCeEEEEEeccc
Q 021160 235 AEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR 268 (316)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~ 268 (316)
...|..++ +++++.++++++.|++|++||+.+.
T Consensus 284 ~~~V~~l~-~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 284 TSRVLSLT-MSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp SSCEEEEE-ECTTSSCEEEEETTTEEEEECCSCC
T ss_pred CCCEEEEE-EcCCCCEEEEEecCCeEEEEECCCC
Confidence 99887776 8899999999999999999998654
No 124
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.95 E-value=6.1e-26 Score=195.68 Aligned_cols=253 Identities=9% Similarity=0.015 Sum_probs=187.8
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
+|.|++||+.+.+....+.... ..+|...|.+++|+|++ .++++++.|+.|++||+++++
T Consensus 143 ~~~i~~~d~~~g~~~~~~~~~~------~~~~~~~v~~~~~~~~~-~~~~s~~~d~~v~~~d~~~~~------------- 202 (433)
T 3bws_A 143 DEGMDVLDINSGQTVRLSPPEK------YKKKLGFVETISIPEHN-ELWVSQMQANAVHVFDLKTLA------------- 202 (433)
T ss_dssp SSSEEEEETTTCCEEEECCCHH------HHTTCCEEEEEEEGGGT-EEEEEEGGGTEEEEEETTTCC-------------
T ss_pred CCeEEEEECCCCeEeeecCccc------ccccCCceeEEEEcCCC-EEEEEECCCCEEEEEECCCce-------------
Confidence 4679999998776543322211 12588899999999988 899999999999999998876
Q ss_pred cccccccCCCcccEEEEEEccCCCeE-EEe-cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEE
Q 021160 82 FCPRHLIGKNNIHITGLAYSNTSELL-ISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNF 159 (316)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~~~~~~~l-~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 159 (316)
....+ ..|...+.+++|+|+++.+ +++ .|+.|++||++++ +....+..+. .+.+++|
T Consensus 203 -~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~----------------~~~~~~~~~~---~~~~~~~ 261 (433)
T 3bws_A 203 -YKATV-DLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTK----------------LEIRKTDKIG---LPRGLLL 261 (433)
T ss_dssp -EEEEE-ECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTT----------------EEEEECCCCS---EEEEEEE
T ss_pred -EEEEE-cCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCC----------------cEEEEecCCC---CceEEEE
Confidence 22222 4677889999999999866 455 6999999999877 4555555432 3899999
Q ss_pred ecCCCcEEEEec--------cCCeEEEEeccCCeeEEEeecCccceEEEEEcCCCCe-EEEEeCCCcEEEecCCCCCCCC
Q 021160 160 FGPNDEYVMSGS--------DCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPM-FATCGIEKTVKLWAPMPTDFPP 230 (316)
Q Consensus 160 ~~~~~~~l~~~~--------~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~-l~s~~~d~~i~iwd~~~~~~~~ 230 (316)
+|+++++++++ .|+.|++||+.+++.+..+ .|...+.+++|+|+++. +++++.|+.|++||+.+++...
T Consensus 262 -~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~ 339 (433)
T 3bws_A 262 -SKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTI-GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQK 339 (433)
T ss_dssp -CTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEE-EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEE
T ss_pred -cCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeec-cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEE
Confidence 99999999888 4889999999999887766 35568899999999976 5677899999999999776322
Q ss_pred CCCCcccceeeeecCCCCceeEEecC---------------CCeEEEEEecccCccee---------EEeeccccccccc
Q 021160 231 LPDNAEKIMKANKQGREDHSRITLTP---------------DVIMHVLRLQRRQTLAY---------RERRYNAADFESD 286 (316)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~s~~~---------------d~~~~~w~~~~~~~~~~---------~~~~~~~~~~~~~ 286 (316)
...+...+..++ +++++.++++++. ||.+++||+.+++.... ..+.|++..+...
T Consensus 340 ~~~~~~~~~~~~-~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 418 (433)
T 3bws_A 340 SIPVFDKPNTIA-LSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQPTGLDVSPDNRYLVIS 418 (433)
T ss_dssp EEECSSSEEEEE-ECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSSSEEEEEECTTSCEEEEE
T ss_pred EecCCCCCCeEE-EcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCCCCCceEEEcCCCCEEEEE
Confidence 222444454444 7788877776665 57999999876543221 2566677666544
Q ss_pred -CCCCeEEEEecc
Q 021160 287 -EEEGETYLLGFS 298 (316)
Q Consensus 287 -~~~~~v~~~~~~ 298 (316)
..++.+.+|+++
T Consensus 419 ~~~d~~i~v~~~~ 431 (433)
T 3bws_A 419 DFLDHQIRVYRRD 431 (433)
T ss_dssp ETTTTEEEEEEET
T ss_pred ECCCCeEEEEEec
Confidence 457788888775
No 125
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.94 E-value=1.1e-24 Score=185.29 Aligned_cols=217 Identities=11% Similarity=0.087 Sum_probs=165.7
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
+|.|++||+.+.+....+.. ...+.+++|+|++..++++++.++.|++||+.+++.
T Consensus 53 d~~i~v~d~~~~~~~~~~~~------------~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~------------ 108 (391)
T 1l0q_A 53 SNDVSIIDTATNNVIATVPA------------GSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTV------------ 108 (391)
T ss_dssp GTEEEEEETTTTEEEEEEEC------------SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE------------
T ss_pred CCeEEEEECCCCeEEEEEEC------------CCCccceEECCCCCEEEEEECCCCEEEEEECCCCeE------------
Confidence 57899999988766544433 237999999999943445666789999999998862
Q ss_pred cccccccCCCcccEEEEEEccCCCeE-EEe-cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEE
Q 021160 82 FCPRHLIGKNNIHITGLAYSNTSELL-ISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNF 159 (316)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~~~~~~~l-~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 159 (316)
...+ . +...+.+++|+|+++.+ +++ .++.|++||+.++ +....+..+.. +.+++|
T Consensus 109 --~~~~-~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~----------------~~~~~~~~~~~---~~~~~~ 165 (391)
T 1l0q_A 109 --AGTV-K-TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTK----------------AVINTVSVGRS---PKGIAV 165 (391)
T ss_dssp --EEEE-E-CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT----------------EEEEEEECCSS---EEEEEE
T ss_pred --EEEE-e-CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCC----------------cEEEEEecCCC---cceEEE
Confidence 2222 2 23468999999999855 555 5999999999887 56666665432 789998
Q ss_pred ecCCCcEE-EEeccCCeEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEe---CCCcEEEecCCCCC-CCCCCCC
Q 021160 160 FGPNDEYV-MSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCG---IEKTVKLWAPMPTD-FPPLPDN 234 (316)
Q Consensus 160 ~~~~~~~l-~~~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~---~d~~i~iwd~~~~~-~~~~~~~ 234 (316)
+|+++++ ++++.++.|++||+.+++.+..+. +...+.+++|+|+++++++++ .++.|++||+.+++ +..+..+
T Consensus 166 -~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~ 243 (391)
T 1l0q_A 166 -TPDGTKVYVANFDSMSISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVG 243 (391)
T ss_dssp -CTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECC
T ss_pred -CCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecC
Confidence 8999877 677889999999999999887776 456789999999999988877 68999999998876 3344333
Q ss_pred cccceeeeecCCCCcee-EEecCCCeEEEEEecccC
Q 021160 235 AEKIMKANKQGREDHSR-ITLTPDVIMHVLRLQRRQ 269 (316)
Q Consensus 235 ~~~~~~~~~~~~~~~~~-~s~~~d~~~~~w~~~~~~ 269 (316)
. .+..+. ++++++.+ ++++.|+.+++||+.+++
T Consensus 244 ~-~~~~~~-~s~dg~~l~~s~~~d~~v~v~d~~~~~ 277 (391)
T 1l0q_A 244 P-DPAGIA-VTPDGKKVYVALSFXNTVSVIDTATNT 277 (391)
T ss_dssp S-SEEEEE-ECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred C-CccEEE-EccCCCEEEEEcCCCCEEEEEECCCCc
Confidence 3 233444 77877766 788899999999988653
No 126
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.93 E-value=2.1e-24 Score=185.99 Aligned_cols=235 Identities=10% Similarity=-0.000 Sum_probs=176.5
Q ss_pred cceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEe-cCC
Q 021160 35 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-NDE 113 (316)
Q Consensus 35 ~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~ 113 (316)
..+.+++|+|++ .++++++.++.|++||+.+++... ...... ..+|...+.+++|++++++++++ .|+
T Consensus 123 ~~~~~~~~s~~~-~~~~~~~~~~~i~~~d~~~g~~~~---------~~~~~~-~~~~~~~v~~~~~~~~~~~~~s~~~d~ 191 (433)
T 3bws_A 123 FQPKSVRFIDNT-RLAIPLLEDEGMDVLDINSGQTVR---------LSPPEK-YKKKLGFVETISIPEHNELWVSQMQAN 191 (433)
T ss_dssp SCBCCCEESSSS-EEEEEBTTSSSEEEEETTTCCEEE---------ECCCHH-HHTTCCEEEEEEEGGGTEEEEEEGGGT
T ss_pred CCceEEEEeCCC-eEEEEeCCCCeEEEEECCCCeEee---------ecCccc-ccccCCceeEEEEcCCCEEEEEECCCC
Confidence 356689999955 788888899999999999876321 111112 25788899999999999988886 699
Q ss_pred cEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEE-EeccCCeEEEEeccCCeeEEEeec
Q 021160 114 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVM-SGSDCGHLFIWKKKGGKLVRLMVG 192 (316)
Q Consensus 114 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~-~~~~dg~v~~wd~~~~~~~~~~~~ 192 (316)
.|++||++++ +....+..|... +.+++| +|++++++ +++.++.|++||+.+++.+..+..
T Consensus 192 ~v~~~d~~~~----------------~~~~~~~~~~~~--~~~~~~-~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~ 252 (433)
T 3bws_A 192 AVHVFDLKTL----------------AYKATVDLTGKW--SKILLY-DPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK 252 (433)
T ss_dssp EEEEEETTTC----------------CEEEEEECSSSS--EEEEEE-ETTTTEEEEEETTTTEEEEEETTTTEEEEECCC
T ss_pred EEEEEECCCc----------------eEEEEEcCCCCC--eeEEEE-cCCCCEEEEEecCCCcEEEEECCCCcEEEEecC
Confidence 9999999887 567777777755 999999 89998874 555899999999999998888876
Q ss_pred CccceEEEEEcCCCCeEEEEe--------CCCcEEEecCCCCCCCCCCCCcccceeeeecCCCCc-eeEEecCCCeEEEE
Q 021160 193 DRHVVNQLEPHPHIPMFATCG--------IEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDH-SRITLTPDVIMHVL 263 (316)
Q Consensus 193 ~~~~v~~~~~~p~~~~l~s~~--------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~d~~~~~w 263 (316)
+ ..+.+++|+|+++.+++++ .|+.|++||+.+++......+...+..+. ++++++ ++++++.++.+++|
T Consensus 253 ~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~-~~~~g~~l~~~~~~~~~v~v~ 330 (433)
T 3bws_A 253 I-GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIV-SGNTENKIYVSDMCCSKIEVY 330 (433)
T ss_dssp C-SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEE-ECSSTTEEEEEETTTTEEEEE
T ss_pred C-CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEE-ECCCCCEEEEEecCCCEEEEE
Confidence 5 4589999999999988887 48899999998876433333444454454 677765 56777999999999
Q ss_pred EecccCccee---------EEeecccccccccCC---------------CCeEEEEeccCCC
Q 021160 264 RLQRRQTLAY---------RERRYNAADFESDEE---------------EGETYLLGFSDSD 301 (316)
Q Consensus 264 ~~~~~~~~~~---------~~~~~~~~~~~~~~~---------------~~~v~~~~~~~~~ 301 (316)
++.+++.... ..+.|++..+..... +|.|++|+...+.
T Consensus 331 d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~ 392 (433)
T 3bws_A 331 DLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDT 392 (433)
T ss_dssp ETTTTEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTE
T ss_pred ECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCc
Confidence 9886533221 145566554443322 5689999886654
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.93 E-value=1.5e-24 Score=185.99 Aligned_cols=264 Identities=11% Similarity=0.007 Sum_probs=185.3
Q ss_pred eeEEEEe--eCCCcceEEEeccccccccCCCCccceEEEEECC--------------CCCcEEEEEecC------CcEEE
Q 021160 4 FNMLFDL--RSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDP--------------RNPNYFAVGGSD------EYARV 61 (316)
Q Consensus 4 ~v~vwd~--~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~--------------~~~~~l~~g~~d------g~v~~ 61 (316)
.|+|||+ .+.+........ +|...+..+++++ .+ ..++.++.+ +.|++
T Consensus 94 ~i~lwd~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~d~~~~~~~g~~~~~~-~~l~~~s~~~~~~~~~~i~i 163 (415)
T 2hqs_A 94 AYQLVDTGGAPGTVLAQNSYK---------VNKQWLRYAGHTASDEVFEKLTGIKGAFR-TRIAYVVQTNGGQFPYELRV 163 (415)
T ss_dssp EEEEEECSSSTTCEEEEEEEE---------ECGGGHHHHHHHHHHHHHHHHHSSCCCTT-CEEEEEEECSSSSCCEEEEE
T ss_pred EEEEEeCCCCCCCEEeeeEEE---------cChhHHHHHHHHHHHHHHHHHcCCCCcCC-CEEEEEEecCCCCccceEEE
Confidence 8999999 776643211111 2566677666664 14 455555543 79999
Q ss_pred EeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEe-cC---CcEEEEEcCCCCCCCCccCCccccc
Q 021160 62 YDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-ND---ELVYLFEKNMGLGPSPLSLSPEDLQ 137 (316)
Q Consensus 62 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d---~~i~iwd~~~~~~~~~~~~~~~~~~ 137 (316)
||+.... ...+ ..|...+.+++|+|+|+.|+++ .+ ..|++||+.++
T Consensus 164 ~d~~g~~---------------~~~l-~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg-------------- 213 (415)
T 2hqs_A 164 SDYDGYN---------------QFVV-HRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANG-------------- 213 (415)
T ss_dssp EETTSCS---------------CEEE-EEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTC--------------
T ss_pred EcCCCCC---------------CEEE-eCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCC--------------
Confidence 9997542 2222 5677899999999999988774 45 38999999887
Q ss_pred cCCCcceeeCCcCCceeeeEEEecCCCcEEE-EeccCC--eEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeC
Q 021160 138 KREEPQVYSGHRNSQTVKGVNFFGPNDEYVM-SGSDCG--HLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGI 214 (316)
Q Consensus 138 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~-~~~~dg--~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~ 214 (316)
+. ..+..+... +.+++| +|+|++|+ +++.++ .|++||+.+++. ..+..|...+.+++|+|+++.|+.++.
T Consensus 214 --~~-~~l~~~~~~--~~~~~~-spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~ 286 (415)
T 2hqs_A 214 --AV-RQVASFPRH--NGAPAF-SPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSD 286 (415)
T ss_dssp --CE-EEEECCSSC--EEEEEE-CTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEEC
T ss_pred --cE-EEeecCCCc--ccCEEE-cCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEEC
Confidence 33 456666654 999999 99999887 666555 499999998875 567778889999999999999888775
Q ss_pred -CC--cEEEecCCCCCCCCCCCCcccceeeeecCCCCceeEEecCC---CeEEEEEecccCcce--------eEEeeccc
Q 021160 215 -EK--TVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLTPD---VIMHVLRLQRRQTLA--------YRERRYNA 280 (316)
Q Consensus 215 -d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d---~~~~~w~~~~~~~~~--------~~~~~~~~ 280 (316)
++ .|++||+.+++...+..+...+.... |++++++++.++.+ ..+.+|++.+++... ...+.|++
T Consensus 287 ~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~-~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~spdg 365 (415)
T 2hqs_A 287 QAGRPQVYKVNINGGAPQRITWEGSQNQDAD-VSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNG 365 (415)
T ss_dssp TTSSCEEEEEETTSSCCEECCCSSSEEEEEE-ECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCCSSSCEEEEECTTS
T ss_pred CCCCcEEEEEECCCCCEEEEecCCCcccCeE-ECCCCCEEEEEECcCCceEEEEEECCCCCEEEecCCCCcCCeEEcCCC
Confidence 44 67778998877655555555554444 88999888877754 689999987653221 12677888
Q ss_pred ccccccCCCC---eEEEEeccCCCCCCCCC--Ccceeeec
Q 021160 281 ADFESDEEEG---ETYLLGFSDSDASSEGG--GNQRECII 315 (316)
Q Consensus 281 ~~~~~~~~~~---~v~~~~~~~~~~~~~~~--~~~~~~~~ 315 (316)
..+.....++ .+++++...+......+ +..+.+-|
T Consensus 366 ~~l~~~s~~~~~~~l~~~d~~g~~~~~l~~~~~~v~~~~~ 405 (415)
T 2hqs_A 366 TMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAW 405 (415)
T ss_dssp SEEEEEEEETTEEEEEEEETTSCCEEECCCSSSEEEEEEE
T ss_pred CEEEEEEcCCCccEEEEEECCCCcEEEeeCCCCCCcCCcc
Confidence 7776655444 79999987554333333 45555544
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.93 E-value=5.5e-23 Score=176.19 Aligned_cols=214 Identities=9% Similarity=0.055 Sum_probs=163.6
Q ss_pred eeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCC---cEEEEeCcCCcccCCCCCCCCc
Q 021160 3 LFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDE---YARVYDIRKCHWYSPISSDTPV 79 (316)
Q Consensus 3 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg---~v~~wd~~~~~~~~~~~~~~~~ 79 (316)
+.|++||+.... ...+.. |...|.+++|+|++ ++|++++.++ .|++||+.+++.
T Consensus 159 ~~i~i~d~~g~~-~~~l~~-----------~~~~v~~~~~Spdg-~~la~~s~~~~~~~i~~~d~~tg~~---------- 215 (415)
T 2hqs_A 159 YELRVSDYDGYN-QFVVHR-----------SPQPLMSPAWSPDG-SKLAYVTFESGRSALVIQTLANGAV---------- 215 (415)
T ss_dssp EEEEEEETTSCS-CEEEEE-----------ESSCEEEEEECTTS-SEEEEEECTTSSCEEEEEETTTCCE----------
T ss_pred ceEEEEcCCCCC-CEEEeC-----------CCCcceeeEEcCCC-CEEEEEEecCCCcEEEEEECCCCcE----------
Confidence 789999997543 333333 56789999999999 8999988775 999999998762
Q ss_pred eecccccccCCCcccEEEEEEccCCCeEE-Ee-cCC--cEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceee
Q 021160 80 DTFCPRHLIGKNNIHITGLAYSNTSELLI-SY-NDE--LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVK 155 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-s~-~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 155 (316)
. .+ ..|...+.+++|+|+|+.|+ ++ .++ .|++||+.++ ....+..+... +.
T Consensus 216 ----~-~l-~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~-----------------~~~~l~~~~~~--~~ 270 (415)
T 2hqs_A 216 ----R-QV-ASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASG-----------------QIRQVTDGRSN--NT 270 (415)
T ss_dssp ----E-EE-ECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTC-----------------CEEECCCCSSC--EE
T ss_pred ----E-Ee-ecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCC-----------------CEEeCcCCCCc--cc
Confidence 1 12 45667899999999999666 44 344 4999999876 33556666654 89
Q ss_pred eEEEecCCCcEEEEecc-CC--eEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCC---CcEEEecCCCCCCC
Q 021160 156 GVNFFGPNDEYVMSGSD-CG--HLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIE---KTVKLWAPMPTDFP 229 (316)
Q Consensus 156 ~~~~~~~~~~~l~~~~~-dg--~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d---~~i~iwd~~~~~~~ 229 (316)
+++| +|+|++|++++. ++ .|++||+.+++. ..+..+...+.+++|+|++++|++++.+ ..|++||+.+++..
T Consensus 271 ~~~~-spdg~~l~~~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~ 348 (415)
T 2hqs_A 271 EPTW-FPDSQNLAFTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ 348 (415)
T ss_dssp EEEE-CTTSSEEEEEECTTSSCEEEEEETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE
T ss_pred ceEE-CCCCCEEEEEECCCCCcEEEEEECCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE
Confidence 9999 999999988876 44 788889988764 4555677788999999999998888754 58999999988765
Q ss_pred CCCCCcccceeeeecCCCCceeEEecCCC---eEEEEEeccc
Q 021160 230 PLPDNAEKIMKANKQGREDHSRITLTPDV---IMHVLRLQRR 268 (316)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~s~~~d~---~~~~w~~~~~ 268 (316)
.+..+. .+... .|+++++.++.++.++ .+.+|++..+
T Consensus 349 ~l~~~~-~~~~~-~~spdg~~l~~~s~~~~~~~l~~~d~~g~ 388 (415)
T 2hqs_A 349 VLSSTF-LDETP-SLAPNGTMVIYSSSQGMGSVLNLVSTDGR 388 (415)
T ss_dssp ECCCSS-SCEEE-EECTTSSEEEEEEEETTEEEEEEEETTSC
T ss_pred EecCCC-CcCCe-EEcCCCCEEEEEEcCCCccEEEEEECCCC
Confidence 565554 44444 4889999888887776 7899997644
No 129
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.91 E-value=1.3e-21 Score=159.49 Aligned_cols=220 Identities=9% Similarity=0.049 Sum_probs=157.0
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcC-CcccCCCCCCCCce
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRK-CHWYSPISSDTPVD 80 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~-~~~~~~~~~~~~~~ 80 (316)
++.|++||+.+.+..... . |...|.+++|+|++ ++|++++ ++.|++||+.+ ++.
T Consensus 21 ~~~i~~~d~~~~~~~~~~-~-----------~~~~v~~~~~spdg-~~l~~~~-~~~i~~~d~~~~~~~----------- 75 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVW-Q-----------TPELFEAPNWSPDG-KYLLLNS-EGLLYRLSLAGDPSP----------- 75 (297)
T ss_dssp CEEEEEEETTTTEEEEEE-E-----------ESSCCEEEEECTTS-SEEEEEE-TTEEEEEESSSCCSC-----------
T ss_pred ceeEEEEeCCCCceeeec-c-----------CCcceEeeEECCCC-CEEEEEc-CCeEEEEeCCCCCCc-----------
Confidence 578999999876654322 2 46789999999999 7888876 78999999998 652
Q ss_pred ecccccccCCC-cccEEEEEEccCCCeEEEec---CCcEEEEEc--CCCCCCCCccCCccccccCCCcceeeCCcCCcee
Q 021160 81 TFCPRHLIGKN-NIHITGLAYSNTSELLISYN---DELVYLFEK--NMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTV 154 (316)
Q Consensus 81 ~~~~~~~~~~~-~~~i~~~~~~~~~~~l~s~~---d~~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 154 (316)
. .+...+ ...+.+++|+|++++|+++. ++...+|.+ .++ ....+..+. . +
T Consensus 76 ---~-~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~-----------------~~~~~~~~~-~--~ 131 (297)
T 2ojh_A 76 ---E-KVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGG-----------------TPRLMTKNL-P--S 131 (297)
T ss_dssp ---E-ECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCC-----------------CCEECCSSS-S--E
T ss_pred ---e-EeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCC-----------------ceEEeecCC-C--c
Confidence 1 111233 46788999999999777743 345555554 443 233333332 2 7
Q ss_pred eeEEEecCCCcEEE-EeccCCeEEEEeccC-CeeEEEeecCccceEEEEEcCCCCeEEEEe-CCCcEEEecCC--CCCCC
Q 021160 155 KGVNFFGPNDEYVM-SGSDCGHLFIWKKKG-GKLVRLMVGDRHVVNQLEPHPHIPMFATCG-IEKTVKLWAPM--PTDFP 229 (316)
Q Consensus 155 ~~~~~~~~~~~~l~-~~~~dg~v~~wd~~~-~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~-~d~~i~iwd~~--~~~~~ 229 (316)
..++| +|++++|+ ++..++.+++|++.. +.....+..+...+.+++|+|+++.|+.++ .++.+++|++. .....
T Consensus 132 ~~~~~-spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~ 210 (297)
T 2ojh_A 132 YWHGW-SPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVE 210 (297)
T ss_dssp EEEEE-CTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEE
T ss_pred cceEE-CCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcE
Confidence 88898 99999887 778899999998642 333456667788899999999999877665 58999999875 34455
Q ss_pred CCCCCcccceeeeecCCCCceeEEecCC-----------CeEEEEEecccCcce
Q 021160 230 PLPDNAEKIMKANKQGREDHSRITLTPD-----------VIMHVLRLQRRQTLA 272 (316)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~s~~~d-----------~~~~~w~~~~~~~~~ 272 (316)
.+..+...+.... +++++++++.++.+ ..+.+|++.+++...
T Consensus 211 ~~~~~~~~~~~~~-~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~ 263 (297)
T 2ojh_A 211 RITDSAYGDWFPH-PSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVET 263 (297)
T ss_dssp ECCCCSEEEEEEE-ECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEE
T ss_pred EEecCCcccCCeE-ECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCcee
Confidence 5655655554444 78888888877765 679999998775543
No 130
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.89 E-value=3.4e-22 Score=171.95 Aligned_cols=223 Identities=12% Similarity=0.073 Sum_probs=150.2
Q ss_pred ccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCC-CCCCCceecccccccCCCcccEEEEEEccCCCeEE----
Q 021160 34 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPI-SSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLI---- 108 (316)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~---- 108 (316)
...++.+++++++ .++++++.++ +++|+.......... .....+..+..... ..+...|.+++|+|++++|+
T Consensus 36 ~~~~n~lavs~~~-~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~l~~spdg~~lav~~~ 112 (434)
T 2oit_A 36 KERSSLLAVSNKY-GLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLL-VPMKFPIHHLALSCDNLTLSACMM 112 (434)
T ss_dssp CSCCBCEEEETTT-TEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEE-ECCSSCEEEEEECTTSCEEEEEEE
T ss_pred CCCccEEEEecCC-CEEEEECCCE-EEEEEchHhhhhcccccCcccccccCcccc-ccCCCcccEEEEcCCCCEEEEEEe
Confidence 3468899999988 7899998887 899886532100000 00011111111111 23466899999999999888
Q ss_pred Ee-cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCC-CcEEEEeccCCeEEEEeccCCee
Q 021160 109 SY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPN-DEYVMSGSDCGHLFIWKKKGGKL 186 (316)
Q Consensus 109 s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~l~~~~~dg~v~~wd~~~~~~ 186 (316)
++ .|+.|++||+.+........ .........+.+|... |.+++| +|+ +.+|++++.||.|++||+++++.
T Consensus 113 sgs~d~~v~iwd~~~~~~~~~~~-----~~~~~~~~~~~~h~~~--V~~v~~-~p~~~~~las~s~Dg~v~iwD~~~~~~ 184 (434)
T 2oit_A 113 SSEYGSIIAFFDVRTFSNEAKQQ-----KRPFAYHKLLKDAGGM--VIDMKW-NPTVPSMVAVCLADGSIAVLQVTETVK 184 (434)
T ss_dssp ETTTEEEEEEEEHHHHHCTTCSS-----CCCSEEEECCCSGGGS--EEEEEE-CSSCTTEEEEEETTSCEEEEEESSSEE
T ss_pred ccCCCceEEEEEccccccCCcCC-----cceeeeeeccCCCCCc--eEEEEE-CCCCCCEEEEEECCCeEEEEEcCCCcc
Confidence 64 59999999987531000000 0000113445567765 999999 787 88999999999999999999887
Q ss_pred EEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCCCCCCC-------CCcccceeeeecCCCCceeEE-ecCCC
Q 021160 187 VRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLP-------DNAEKIMKANKQGREDHSRIT-LTPDV 258 (316)
Q Consensus 187 ~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~s-~~~d~ 258 (316)
+....+|...|.+++|+|++++|++|+.||.|++||++......+. .|...+..+. |.++..++++ ...+|
T Consensus 185 ~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~-w~~~~~~l~~~~~~dg 263 (434)
T 2oit_A 185 VCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPPFYESDHPVRVLDVL-WIGTYVFAIVYAAADG 263 (434)
T ss_dssp EEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTTCCEEEEECCCTTCCTTSCEEEEEEE-EEETTEEEEEEEETTC
T ss_pred eeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccCCcccccccCCcccCCCCceeEEEEE-EecCceEEEEEccCCC
Confidence 7777788999999999999999999999999999999832222111 1233566666 4555656544 33332
Q ss_pred ------eEEEEEeccc
Q 021160 259 ------IMHVLRLQRR 268 (316)
Q Consensus 259 ------~~~~w~~~~~ 268 (316)
.+++|++.+.
T Consensus 264 ~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 264 TLETSPDVVMALLPKK 279 (434)
T ss_dssp CSSSCCEEEEEECCCT
T ss_pred ccCCCCceEEEEeccC
Confidence 4899999865
No 131
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.89 E-value=2.4e-20 Score=156.11 Aligned_cols=259 Identities=7% Similarity=0.018 Sum_probs=174.6
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
.|.|.+||+.+.+....+.. ...+..++|+|++..++++...++.|.+||..+++....+......
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~------------~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~-- 133 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHN------------DLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRK-- 133 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEE------------SSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCC--
T ss_pred CccEEEEcCCCCeEEEEEec------------CCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCc--
Confidence 46899999988776555543 2246789999999445566667899999999988732211000000
Q ss_pred cccccccCCCcccEEEEEEccCCCeEEE-e--cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEE
Q 021160 82 FCPRHLIGKNNIHITGLAYSNTSELLIS-Y--NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVN 158 (316)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~~~~~~~l~s-~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 158 (316)
.........+.+++|+|+++.++. . .++.|.+||..++ +....+..+... +.+++
T Consensus 134 ----~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~----------------~~~~~~~~~~~~--~~~~~ 191 (353)
T 3vgz_A 134 ----RTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNI----------------KLKTAIQNTGKM--STGLA 191 (353)
T ss_dssp ----CCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTT----------------EEEEEECCCCTT--CCCCE
T ss_pred ----cccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCC----------------ceEEEecCCCCc--cceEE
Confidence 000001123688999999985544 3 3788999999887 555556534433 78889
Q ss_pred EecCCCcEEEEeccCCeEEEEeccCCeeEEEeec----CccceEEEEEcCCCCeEEEEe-CCCcEEEecCCCCC-CCCCC
Q 021160 159 FFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVG----DRHVVNQLEPHPHIPMFATCG-IEKTVKLWAPMPTD-FPPLP 232 (316)
Q Consensus 159 ~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~----~~~~v~~~~~~p~~~~l~s~~-~d~~i~iwd~~~~~-~~~~~ 232 (316)
| +|+++++++++.++.+.+||+.+++.+..+.. +...+..++|+|+++.++.++ .++.|.+||+.+++ ...+.
T Consensus 192 ~-s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~ 270 (353)
T 3vgz_A 192 L-DSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVA 270 (353)
T ss_dssp E-ETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEE
T ss_pred E-CCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEE
Confidence 8 99999999999999999999999998887764 455678899999999766555 45899999998876 22222
Q ss_pred CCcccceeeeecCCCCc-eeEEecCCCeEEEEEecccCcceeEEeecccccccccCCCCeEEEEeccCC
Q 021160 233 DNAEKIMKANKQGREDH-SRITLTPDVIMHVLRLQRRQTLAYRERRYNAADFESDEEEGETYLLGFSDS 300 (316)
Q Consensus 233 ~~~~~~~~~~~~~~~~~-~~~s~~~d~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 300 (316)
.. .. ... .++++++ ++++...++.+.+||+.+++.............++...+...+|+......
T Consensus 271 ~~-~~-~~~-~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~ 336 (353)
T 3vgz_A 271 AP-ES-LAV-LFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSADGKTLYVSVKQKS 336 (353)
T ss_dssp CS-SC-CCE-EEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCSEEEEEEECTTSCEEEEEEECCC
T ss_pred cC-CC-ceE-EECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCCCCCeEEEcCCCCEEEEEEcccc
Confidence 11 11 233 3667776 556666799999999987755443333223344444555555777665433
No 132
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.89 E-value=8.8e-21 Score=157.52 Aligned_cols=252 Identities=6% Similarity=-0.050 Sum_probs=168.5
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
.+.|.+||+.+.+....+... ...+ .++|+|++..+++++..++.|.+||+.+++..
T Consensus 19 ~~~v~~~d~~~~~~~~~~~~~-----------~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~----------- 75 (331)
T 3u4y_A 19 LRRISFFSTDTLEILNQITLG-----------YDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPK----------- 75 (331)
T ss_dssp GTEEEEEETTTCCEEEEEECC-----------CCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCE-----------
T ss_pred CCeEEEEeCcccceeeeEEcc-----------CCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCcee-----------
Confidence 578999999887765555432 3345 99999999334444455899999999987620
Q ss_pred cccccccCCCcccEEEEEEccCCCeEEEec-C-C--cEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeE
Q 021160 82 FCPRHLIGKNNIHITGLAYSNTSELLISYN-D-E--LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGV 157 (316)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~-d-~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 157 (316)
...+ ..+..+..+++|+|+|++++++. + + .|.+||+.++ +....+..+. . ..++
T Consensus 76 --~~~~-~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~----------------~~~~~~~~~~-~--~~~~ 133 (331)
T 3u4y_A 76 --VVAI-QEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKN----------------KFISTIPIPY-D--AVGI 133 (331)
T ss_dssp --EEEE-EECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTT----------------EEEEEEECCT-T--EEEE
T ss_pred --EEec-ccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCC----------------CeEEEEECCC-C--ccce
Confidence 1111 33344455599999999777644 3 3 8999999887 4555555433 2 6899
Q ss_pred EEecCCCcEEEEe-ccCCe-EEEEeccCCeeE----EEeecCccceEEEEEcCCCCeE-EEEeCCCcEEEecCCCCCC--
Q 021160 158 NFFGPNDEYVMSG-SDCGH-LFIWKKKGGKLV----RLMVGDRHVVNQLEPHPHIPMF-ATCGIEKTVKLWAPMPTDF-- 228 (316)
Q Consensus 158 ~~~~~~~~~l~~~-~~dg~-v~~wd~~~~~~~----~~~~~~~~~v~~~~~~p~~~~l-~s~~~d~~i~iwd~~~~~~-- 228 (316)
+| +|+|++++++ ..++. +.+|++.....+ .........+..++|+|+++++ +++..++.|++||+.+++.
T Consensus 134 ~~-spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~ 212 (331)
T 3u4y_A 134 AI-SPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENIT 212 (331)
T ss_dssp EE-CTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCE
T ss_pred EE-CCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccc
Confidence 99 9999866554 55577 999998754332 1111234567899999999965 5555789999999987664
Q ss_pred -C-CCCCCcccceeeeecCCCCceeE-EecCCCeEEEEEecccCcce---------------e----EEeeccccccc-c
Q 021160 229 -P-PLPDNAEKIMKANKQGREDHSRI-TLTPDVIMHVLRLQRRQTLA---------------Y----RERRYNAADFE-S 285 (316)
Q Consensus 229 -~-~~~~~~~~~~~~~~~~~~~~~~~-s~~~d~~~~~w~~~~~~~~~---------------~----~~~~~~~~~~~-~ 285 (316)
. .+. ....+..+. +++++++++ +...++.+.+|++.+++... + ..+.|++..+. +
T Consensus 213 ~~~~~~-~~~~~~~~~-~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~ 290 (331)
T 3u4y_A 213 LLNAVG-TNNLPGTIV-VSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFIS 290 (331)
T ss_dssp EEEEEE-CSSCCCCEE-ECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEE
T ss_pred eeeecc-CCCCCceEE-ECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEe
Confidence 2 222 222333333 788888554 55567889999988764410 0 14566666553 4
Q ss_pred cCCCCeEEEEeccCCC
Q 021160 286 DEEEGETYLLGFSDSD 301 (316)
Q Consensus 286 ~~~~~~v~~~~~~~~~ 301 (316)
..+++.|.+|+++...
T Consensus 291 ~~~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 291 ANISRELKVFTISGKV 306 (331)
T ss_dssp ETTTTEEEEEETTSCE
T ss_pred cCCCCcEEEEEecCCc
Confidence 5667789999987654
No 133
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.88 E-value=2e-20 Score=165.20 Aligned_cols=252 Identities=10% Similarity=0.056 Sum_probs=177.9
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeC--cCCcccCCCCCCCCc
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDI--RKCHWYSPISSDTPV 79 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~--~~~~~~~~~~~~~~~ 79 (316)
+|.|.+||..+.+....+... |. +..++|+|++ +++++++.|+.|++||+ .+++
T Consensus 158 d~~V~v~D~~t~~~~~~i~~g----------~~--~~~v~~spdg-~~l~v~~~d~~V~v~D~~~~t~~----------- 213 (543)
T 1nir_A 158 AGQIALVDGDSKKIVKVIDTG----------YA--VHISRMSASG-RYLLVIGRDARIDMIDLWAKEPT----------- 213 (543)
T ss_dssp GTEEEEEETTTCCEEEEEECS----------TT--EEEEEECTTS-CEEEEEETTSEEEEEETTSSSCE-----------
T ss_pred CCeEEEEECCCceEEEEEecC----------cc--cceEEECCCC-CEEEEECCCCeEEEEECcCCCCc-----------
Confidence 578999999888776655432 32 8899999999 89999999999999999 6665
Q ss_pred eecccccccCCCcccEEEEEEcc----CCCeEEEe--cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCc----
Q 021160 80 DTFCPRHLIGKNNIHITGLAYSN----TSELLISY--NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHR---- 149 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~i~~~~~~~----~~~~l~s~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 149 (316)
+...+ . +......++|+| +|++++++ .+++|.+||..+. ++++.+..+.
T Consensus 214 ---~~~~i-~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~----------------~~~~~i~~~g~~~~ 272 (543)
T 1nir_A 214 ---KVAEI-K-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETL----------------EPKQIVSTRGMTVD 272 (543)
T ss_dssp ---EEEEE-E-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTC----------------CEEEEEECCEECSS
T ss_pred ---EEEEE-e-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEecccc----------------ccceeecccCcccC
Confidence 22222 2 234578999999 99977764 4899999999877 5666665421
Q ss_pred -----CCceeeeEEEecCCC-cEEEEeccCCeEEEEeccCCeeEE--EeecCccceEEEEEcCCCCeEEE-EeCCCcEEE
Q 021160 150 -----NSQTVKGVNFFGPND-EYVMSGSDCGHLFIWKKKGGKLVR--LMVGDRHVVNQLEPHPHIPMFAT-CGIEKTVKL 220 (316)
Q Consensus 150 -----~~~~i~~~~~~~~~~-~~l~~~~~dg~v~~wd~~~~~~~~--~~~~~~~~v~~~~~~p~~~~l~s-~~~d~~i~i 220 (316)
....+..+.+ +|++ .++++...++.|.+||+.+.+.+. .+. +...+..++|+|++++|++ +..+++|.+
T Consensus 273 ~~~~~~~~~v~~i~~-s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~-~~~~~~~~~~spdg~~l~va~~~~~~v~v 350 (543)
T 1nir_A 273 TQTYHPEPRVAAIIA-SHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG-AAPFLHDGGWDSSHRYFMTAANNSNKVAV 350 (543)
T ss_dssp SCCEESCCCEEEEEE-CSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE-CCSSCCCEEECTTSCEEEEEEGGGTEEEE
T ss_pred ccccccCCceEEEEE-CCCCCEEEEEECCCCeEEEEEecCCCcceeEEec-cCcCccCceECCCCCEEEEEecCCCeEEE
Confidence 0113788988 7755 456777889999999998766544 333 5567888999999998654 456899999
Q ss_pred ecCCCCC-CCCCCC----CcccceeeeecCCC-CceeEEec-CCCeEEEEEecc-------cCc----------ceeEEe
Q 021160 221 WAPMPTD-FPPLPD----NAEKIMKANKQGRE-DHSRITLT-PDVIMHVLRLQR-------RQT----------LAYRER 276 (316)
Q Consensus 221 wd~~~~~-~~~~~~----~~~~~~~~~~~~~~-~~~~~s~~-~d~~~~~w~~~~-------~~~----------~~~~~~ 276 (316)
||+.+++ ...+.. |...... +..++ +..+++.. .|++|.+|++.+ .+. .....+
T Consensus 351 ~D~~tg~l~~~i~~g~~ph~g~g~~--~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~ 428 (543)
T 1nir_A 351 IDSKDRRLSALVDVGKTPHPGRGAN--FVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKT 428 (543)
T ss_dssp EETTTTEEEEEEECSSSBCCTTCEE--EEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEEC
T ss_pred EECCCCeEEEeeccCCCCCCCCCcc--cCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEc
Confidence 9999886 222321 3322222 23454 66677765 689999999976 211 122356
Q ss_pred ecccccccccC-------CCCeEEEEeccCCCC
Q 021160 277 RYNAADFESDE-------EEGETYLLGFSDSDA 302 (316)
Q Consensus 277 ~~~~~~~~~~~-------~~~~v~~~~~~~~~~ 302 (316)
.|++..+..+. .++.|.+||..+.+.
T Consensus 429 ~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~ 461 (543)
T 1nir_A 429 HPKSSHLYVDTTFNPDARISQSVAVFDLKNLDA 461 (543)
T ss_dssp CTTCCEEEECCTTCSSHHHHTCEEEEETTCTTS
T ss_pred CCCCCcEEEecCCCCCcccCceEEEEECCCCCC
Confidence 67777766654 156799999887664
No 134
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.87 E-value=4e-20 Score=159.10 Aligned_cols=169 Identities=9% Similarity=0.064 Sum_probs=126.5
Q ss_pred CccceEEEEECCCCCcEEE----EEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccC-CCeE
Q 021160 33 NSIRLNAIVIDPRNPNYFA----VGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNT-SELL 107 (316)
Q Consensus 33 h~~~v~~~~~~~~~~~~l~----~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l 107 (316)
|...|++++|+|++ ++|+ +|+.|+.|++||+.+.... ......++ .......+|...|.+++|+|+ +.+|
T Consensus 91 ~~~~v~~l~~spdg-~~lav~~~sgs~d~~v~iwd~~~~~~~-~~~~~~~~---~~~~~~~~h~~~V~~v~~~p~~~~~l 165 (434)
T 2oit_A 91 MKFPIHHLALSCDN-LTLSACMMSSEYGSIIAFFDVRTFSNE-AKQQKRPF---AYHKLLKDAGGMVIDMKWNPTVPSMV 165 (434)
T ss_dssp CSSCEEEEEECTTS-CEEEEEEEETTTEEEEEEEEHHHHHCT-TCSSCCCS---EEEECCCSGGGSEEEEEECSSCTTEE
T ss_pred CCCcccEEEEcCCC-CEEEEEEeccCCCceEEEEEccccccC-CcCCccee---eeeeccCCCCCceEEEEECCCCCCEE
Confidence 56689999999999 7888 7889999999999754100 00000111 112233678999999999998 6778
Q ss_pred EE-ecCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCee
Q 021160 108 IS-YNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKL 186 (316)
Q Consensus 108 ~s-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~ 186 (316)
++ +.|++|++||++++ .......+|... +.+++| +|+|++|++|+.||.|++||++ ++.
T Consensus 166 as~s~Dg~v~iwD~~~~----------------~~~~~~~~~~~~--v~~v~w-spdg~~lasgs~dg~v~iwd~~-~~~ 225 (434)
T 2oit_A 166 AVCLADGSIAVLQVTET----------------VKVCATLPSTVA--VTSVCW-SPKGKQLAVGKQNGTVVQYLPT-LQE 225 (434)
T ss_dssp EEEETTSCEEEEEESSS----------------EEEEEEECGGGC--EEEEEE-CTTSSCEEEEETTSCEEEECTT-CCE
T ss_pred EEEECCCeEEEEEcCCC----------------cceeeccCCCCc--eeEEEE-cCCCCEEEEEcCCCcEEEEccC-Ccc
Confidence 87 57999999999876 344455667655 999999 9999999999999999999998 665
Q ss_pred EEEeecC-------ccceEEEEEcCCCCeEEE-EeCCCc------EEEecCCCC
Q 021160 187 VRLMVGD-------RHVVNQLEPHPHIPMFAT-CGIEKT------VKLWAPMPT 226 (316)
Q Consensus 187 ~~~~~~~-------~~~v~~~~~~p~~~~l~s-~~~d~~------i~iwd~~~~ 226 (316)
...+..| ...|.+++|++++.++++ .+.||. +++|+++..
T Consensus 226 ~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 226 KKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred cccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 6655443 238999999998877644 444533 899998765
No 135
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.86 E-value=1.1e-19 Score=151.30 Aligned_cols=254 Identities=11% Similarity=0.119 Sum_probs=162.2
Q ss_pred ceeeEEEEeeCCCc-ceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecC-CcEEEEeCc--CCcccCCCCCCC
Q 021160 2 VLFNMLFDLRSDSA-TRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSD-EYARVYDIR--KCHWYSPISSDT 77 (316)
Q Consensus 2 ~g~v~vwd~~~~~~-~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~d-g~v~~wd~~--~~~~~~~~~~~~ 77 (316)
+|.|++||+..... ....... |...+.+++|+|++ +++++++.+ +.|.+|++. +++..
T Consensus 14 ~~~v~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~spdg-~~l~~~~~~~~~v~~~~~~~~~~~~~------- 75 (343)
T 1ri6_A 14 SQQIHVWNLNHEGALTLTQVVD----------VPGQVQPMVVSPDK-RYLYVGVRPEFRVLAYRIAPDDGALT------- 75 (343)
T ss_dssp GTEEEEEEECTTSCEEEEEEEE----------CSSCCCCEEECTTS-SEEEEEETTTTEEEEEEECTTTCCEE-------
T ss_pred CCeEEEEEECCCCcEEEeeeEe----------cCCCCceEEECCCC-CEEEEeecCCCeEEEEEecCCCCcee-------
Confidence 57899999964322 2222222 45678899999999 777777765 999999997 44311
Q ss_pred CceecccccccCCCcccEEEEEEccCCCeEEE-e-cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceee
Q 021160 78 PVDTFCPRHLIGKNNIHITGLAYSNTSELLIS-Y-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVK 155 (316)
Q Consensus 78 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s-~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 155 (316)
....+ ..+ ..+..++|+|++++++. + .++.|.+||+..+. .......+..+. .+.
T Consensus 76 -----~~~~~-~~~-~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~-------------~~~~~~~~~~~~---~~~ 132 (343)
T 1ri6_A 76 -----FAAES-ALP-GSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGL-------------PVGVVDVVEGLD---GCH 132 (343)
T ss_dssp -----EEEEE-ECS-SCCSEEEECTTSSEEEEEETTTTEEEEEEEETTE-------------EEEEEEEECCCT---TBC
T ss_pred -----ecccc-ccC-CCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCc-------------cccccccccCCC---Cce
Confidence 11111 112 26789999999996544 4 48899999994220 002333333332 278
Q ss_pred eEEEecCCCcEEEEec-cCCeEEEEeccC-CeeEE----Eeec-CccceEEEEEcCCCCeEEE-EeCCCcEEEecCCC--
Q 021160 156 GVNFFGPNDEYVMSGS-DCGHLFIWKKKG-GKLVR----LMVG-DRHVVNQLEPHPHIPMFAT-CGIEKTVKLWAPMP-- 225 (316)
Q Consensus 156 ~~~~~~~~~~~l~~~~-~dg~v~~wd~~~-~~~~~----~~~~-~~~~v~~~~~~p~~~~l~s-~~~d~~i~iwd~~~-- 225 (316)
+++| +|+++++++++ .++.|++||+.+ ++... .+.. ....+..++|+|++++++. +..++.|.+|++..
T Consensus 133 ~~~~-s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~ 211 (343)
T 1ri6_A 133 SANI-SPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPH 211 (343)
T ss_dssp CCEE-CTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTT
T ss_pred EEEE-CCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCC
Confidence 8998 99999888777 899999999987 65432 2232 2347888999999997654 44889999999954
Q ss_pred CCCC------CCCCC---cccceeeeecCCCCceeE-EecCCCeEEEEEecc--cCcce-----------eEEeeccccc
Q 021160 226 TDFP------PLPDN---AEKIMKANKQGREDHSRI-TLTPDVIMHVLRLQR--RQTLA-----------YRERRYNAAD 282 (316)
Q Consensus 226 ~~~~------~~~~~---~~~~~~~~~~~~~~~~~~-s~~~d~~~~~w~~~~--~~~~~-----------~~~~~~~~~~ 282 (316)
+... .++.. ...+.. ..+++++++++ +...++.+.+|++.. +.... ...+.|++..
T Consensus 212 g~~~~~~~~~~~~~~~~~~~~~~~-i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~ 290 (343)
T 1ri6_A 212 GNIECVQTLDMMPENFSDTRWAAD-IHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKY 290 (343)
T ss_dssp SCCEEEEEEECSCTTCCSCCCEEE-EEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSE
T ss_pred CcEEEEeeccccCccccccCCccc-eEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCE
Confidence 3221 11111 112222 34778776655 666899999999972 21111 1245566654
Q ss_pred cccc-CCCCeEEEEecc
Q 021160 283 FESD-EEEGETYLLGFS 298 (316)
Q Consensus 283 ~~~~-~~~~~v~~~~~~ 298 (316)
+... ..++.+.+|++.
T Consensus 291 l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 291 LIAAGQKSHHISVYEIV 307 (343)
T ss_dssp EEEECTTTCEEEEEEEE
T ss_pred EEEecCCCCeEEEEEEc
Confidence 4444 356778888554
No 136
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.86 E-value=7.1e-20 Score=152.14 Aligned_cols=224 Identities=8% Similarity=0.007 Sum_probs=155.0
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCcc-ceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCce
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSI-RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVD 80 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~-~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~ 80 (316)
+|.|.+||+.+.+....+... +.. .+..++|+|++..+++++..++.|.+||+.+++....
T Consensus 10 ~~~v~~~d~~~~~~~~~~~~~----------~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~-------- 71 (337)
T 1pby_B 10 PDKLVVIDTEKMAVDKVITIA----------DAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGR-------- 71 (337)
T ss_dssp TTEEEEEETTTTEEEEEEECT----------TCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEE--------
T ss_pred CCeEEEEECCCCcEEEEEEcC----------CCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEee--------
Confidence 578999999887665544432 111 3678999999944556667789999999988763211
Q ss_pred ecccccccCCCcccEEEEEEccCCCeEEEe-------------cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeC
Q 021160 81 TFCPRHLIGKNNIHITGLAYSNTSELLISY-------------NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSG 147 (316)
Q Consensus 81 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-------------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (316)
+.... ...|...+..++|+|+|+.++.+ .++.|.+||+.++ +....+..
T Consensus 72 -~~~~~-~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~----------------~~~~~~~~ 133 (337)
T 1pby_B 72 -IDLST-PEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETL----------------SRRKAFEA 133 (337)
T ss_dssp -EECCB-TTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTT----------------EEEEEEEC
T ss_pred -EEcCC-cccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCC----------------cEEEEEeC
Confidence 11000 00122356689999999866664 4799999999876 45555543
Q ss_pred CcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCeeEEEeecCc---------------------------------
Q 021160 148 HRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR--------------------------------- 194 (316)
Q Consensus 148 ~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~~--------------------------------- 194 (316)
... +.+++| +|++++++++ ++.|++||+.+++....+..+.
T Consensus 134 -~~~--~~~~~~-s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~ 207 (337)
T 1pby_B 134 -PRQ--ITMLAW-ARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARK 207 (337)
T ss_dssp -CSS--CCCEEE-CTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBT
T ss_pred -CCC--cceeEE-CCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeecccc
Confidence 222 778888 9999988887 5789999998887665443221
Q ss_pred ---------------------------------cceEEEEEcCCCCeEEEEeCCCcEEEecCCCCCC-CCCCCCccccee
Q 021160 195 ---------------------------------HVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLPDNAEKIMK 240 (316)
Q Consensus 195 ---------------------------------~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~ 240 (316)
..+..++|+|++++++++ ++.|++||+.+++. ..+. ....+..
T Consensus 208 ~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~-~~~~~~~ 284 (337)
T 1pby_B 208 DIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVP-LPHSYYS 284 (337)
T ss_dssp TSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEE-CSSCCCE
T ss_pred ccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceec-CCCceee
Confidence 234468999999998877 68999999987762 2222 1223334
Q ss_pred eeecCCCCceeEEecCCCeEEEEEecccCcc
Q 021160 241 ANKQGREDHSRITLTPDVIMHVLRLQRRQTL 271 (316)
Q Consensus 241 ~~~~~~~~~~~~s~~~d~~~~~w~~~~~~~~ 271 (316)
+. ++++++++++++.++.+.+|++.+++..
T Consensus 285 ~~-~s~dg~~l~~~~~~~~i~v~d~~~~~~~ 314 (337)
T 1pby_B 285 VN-VSTDGSTVWLGGALGDLAAYDAETLEKK 314 (337)
T ss_dssp EE-ECTTSCEEEEESBSSEEEEEETTTCCEE
T ss_pred EE-ECCCCCEEEEEcCCCcEEEEECcCCcEE
Confidence 44 7788888888888999999999887554
No 137
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.86 E-value=1.4e-20 Score=172.57 Aligned_cols=224 Identities=12% Similarity=0.039 Sum_probs=154.2
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecC---------CcEEEEeCcCCcccCC
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSD---------EYARVYDIRKCHWYSP 72 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~d---------g~v~~wd~~~~~~~~~ 72 (316)
+|.|++||+.+.+....+..+.. +...|.+++|+|+| ++|++++.+ +.+.+||+.+++..
T Consensus 36 dg~i~~~d~~~g~~~~~~~~~~~--------~~~~v~~~~~SpDg-~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~-- 104 (723)
T 1xfd_A 36 KGTVRLWNVETNTSTVLIEGKKI--------ESLRAIRYEISPDR-EYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQ-- 104 (723)
T ss_dssp SSCEEEBCGGGCCCEEEECTTTT--------TTTTCSEEEECTTS-SEEEEEESCCCCSSSCCCSEEEEEESSSCCCE--
T ss_pred CCCEEEEECCCCcEEEEeccccc--------cccccceEEECCCC-CEEEEEecCccceeecceeeEEEEECCCCceE--
Confidence 57899999998876544432211 11248999999999 888888764 77889999987621
Q ss_pred CCCCCCceecccccccCCCcccEEEEEEccCCCeEEEecCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCC-
Q 021160 73 ISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNS- 151 (316)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 151 (316)
.. .....|...+..++|+|+|+.|+.+.++.|++||+.++ +..+....+...
T Consensus 105 ----------~l-~~~~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~g----------------~~~~~~~~~~~~~ 157 (723)
T 1xfd_A 105 ----------SL-DPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAHVGK----------------QAIRVVSTGKEGV 157 (723)
T ss_dssp ----------EC-CCTTCCSCCCSBCCBCSSTTCEEEEETTEEEEESSSSS----------------CCEEEECCCBTTT
T ss_pred ----------ec-cCCccccccccccEECCCCCEEEEEECCeEEEEECCCC----------------ceEEEecCCCCCc
Confidence 01 11134455588899999999998877799999999887 343333332221
Q ss_pred ---------------ceeeeEEEecCCCcEEEEeccCC----------------------------------eEEEEecc
Q 021160 152 ---------------QTVKGVNFFGPNDEYVMSGSDCG----------------------------------HLFIWKKK 182 (316)
Q Consensus 152 ---------------~~i~~~~~~~~~~~~l~~~~~dg----------------------------------~v~~wd~~ 182 (316)
..+.+++| +|+|++|++++.++ .|++||+.
T Consensus 158 ~~~g~~~~v~~ee~~~~~~~~~~-SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~ 236 (723)
T 1xfd_A 158 IYNGLSDWLYEEEILKTHIAHWW-SPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLN 236 (723)
T ss_dssp EEEEECCHHHHHTTSSSSEEEEE-CTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESS
T ss_pred eECcccceeEEEEeccCcceEEE-CCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECC
Confidence 01368998 99999999987553 79999999
Q ss_pred CCeeEEEeecC------ccceEEEEEcCCCCeEEEEeC----CCcEEEecCCCCCCCCCC-CC-cccce---eeeecCCC
Q 021160 183 GGKLVRLMVGD------RHVVNQLEPHPHIPMFATCGI----EKTVKLWAPMPTDFPPLP-DN-AEKIM---KANKQGRE 247 (316)
Q Consensus 183 ~~~~~~~~~~~------~~~v~~~~~~p~~~~l~s~~~----d~~i~iwd~~~~~~~~~~-~~-~~~~~---~~~~~~~~ 247 (316)
+++....+..+ ...+..++|+|+++++++.+. +..|++||+.+++...+. .+ ...+. ....|+++
T Consensus 237 ~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spd 316 (723)
T 1xfd_A 237 GPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKD 316 (723)
T ss_dssp SSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTT
T ss_pred CCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCC
Confidence 88865666554 567899999999998876643 357999999887633221 11 11111 13347888
Q ss_pred CceeEE--ecCCC------eEEEEE
Q 021160 248 DHSRIT--LTPDV------IMHVLR 264 (316)
Q Consensus 248 ~~~~~s--~~~d~------~~~~w~ 264 (316)
++.++. ...++ .+.+|+
T Consensus 317 g~~l~~~~~~~~~~~~~~~~l~~~d 341 (723)
T 1xfd_A 317 GRKFFFIRAIPQGGRGKFYHITVSS 341 (723)
T ss_dssp SCSEEEEEEECCSSSSCEEEEEEEC
T ss_pred CCeEEEEEecccCCCcceeEEEEEe
Confidence 886664 45666 456666
No 138
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.86 E-value=3.5e-19 Score=157.31 Aligned_cols=260 Identities=10% Similarity=0.069 Sum_probs=176.8
Q ss_pred ceeeEEEEe--eCCCcceEEEeccccccccCCCCccceEEEEECC----CCCcEEEEEe-cCCcEEEEeCcCCcccCCCC
Q 021160 2 VLFNMLFDL--RSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDP----RNPNYFAVGG-SDEYARVYDIRKCHWYSPIS 74 (316)
Q Consensus 2 ~g~v~vwd~--~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~----~~~~~l~~g~-~dg~v~~wd~~~~~~~~~~~ 74 (316)
+|.|++||+ .+.+....+. +...+..++|+| ++ +++++++ .+++|.+||..++++...+.
T Consensus 199 d~~V~v~D~~~~t~~~~~~i~------------~g~~p~~va~sp~~~~dg-~~l~v~~~~~~~v~v~D~~t~~~~~~i~ 265 (543)
T 1nir_A 199 DARIDMIDLWAKEPTKVAEIK------------IGIEARSVESSKFKGYED-RYTIAGAYWPPQFAIMDGETLEPKQIVS 265 (543)
T ss_dssp TSEEEEEETTSSSCEEEEEEE------------CCSEEEEEEECCSTTCTT-TEEEEEEEESSEEEEEETTTCCEEEEEE
T ss_pred CCeEEEEECcCCCCcEEEEEe------------cCCCcceEEeCCCcCCCC-CEEEEEEccCCeEEEEeccccccceeec
Confidence 478999999 5554433332 233578999999 99 7887777 58999999998887432211
Q ss_pred CCCCceecccccccCCCc-ccEEEEEEccCCC-eEEEe-cCCcEEEEEcCCCCCCCCccCCccccccCCCcc--eeeCCc
Q 021160 75 SDTPVDTFCPRHLIGKNN-IHITGLAYSNTSE-LLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQ--VYSGHR 149 (316)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~-~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 149 (316)
.... ..... ..|. ..+..+.++|++. ++++. .+++|.+||+.+. +.+. .+. +.
T Consensus 266 ~~g~----~~~~~-~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~----------------~~l~~~~i~-~~ 323 (543)
T 1nir_A 266 TRGM----TVDTQ-TYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDI----------------DNLTVTSIG-AA 323 (543)
T ss_dssp CCEE----CSSSC-CEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTS----------------SSCEEEEEE-CC
T ss_pred ccCc----ccCcc-ccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCC----------------CcceeEEec-cC
Confidence 0000 00000 0122 3688999999887 45554 6899999999876 3332 332 33
Q ss_pred CCceeeeEEEecCCCcEEEEe-ccCCeEEEEeccCCeeEEEeec----CccceEEEEEcCC-CCeEEEEe-CCCcEEEec
Q 021160 150 NSQTVKGVNFFGPNDEYVMSG-SDCGHLFIWKKKGGKLVRLMVG----DRHVVNQLEPHPH-IPMFATCG-IEKTVKLWA 222 (316)
Q Consensus 150 ~~~~i~~~~~~~~~~~~l~~~-~~dg~v~~wd~~~~~~~~~~~~----~~~~v~~~~~~p~-~~~l~s~~-~d~~i~iwd 222 (316)
..+.++.| +|++++++++ ..+++|.+||+.+++++..+.. |.+....+ ++|+ ++.+++++ .|++|.+||
T Consensus 324 --~~~~~~~~-spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d 399 (543)
T 1nir_A 324 --PFLHDGGW-DSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIG 399 (543)
T ss_dssp --SSCCCEEE-CTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEE
T ss_pred --cCccCceE-CCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEE
Confidence 23788999 9999977655 5689999999999999988874 55444443 5787 66677775 689999999
Q ss_pred CCC-------CC-CCCCCCCcccceeeeecCCCCceeEEecC-------CCeEEEEEecccCcc----------------
Q 021160 223 PMP-------TD-FPPLPDNAEKIMKANKQGREDHSRITLTP-------DVIMHVLRLQRRQTL---------------- 271 (316)
Q Consensus 223 ~~~-------~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~-------d~~~~~w~~~~~~~~---------------- 271 (316)
+.+ .+ +.++..+......+. ++++++.+.+.+. +..|.+||+.+.+..
T Consensus 400 ~~~~~~~~~~~~~v~~l~~~g~~~~~v~-~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~ 478 (543)
T 1nir_A 400 TDPKNHPQYAWKKVAELQGQGGGSLFIK-THPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGA 478 (543)
T ss_dssp CCTTTCTTTBTSEEEEEECSCSCCCCEE-CCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSC
T ss_pred eCCCCCchhcCeEEEEEEcCCCCceEEE-cCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCC
Confidence 987 33 455555655554444 7889989888762 679999999865433
Q ss_pred ---eeEEeeccccccccc-----CCCCeEEEEeccCCC
Q 021160 272 ---AYRERRYNAADFESD-----EEEGETYLLGFSDSD 301 (316)
Q Consensus 272 ---~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~ 301 (316)
...++.+++..+... ++++.|.+||...++
T Consensus 479 ~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~ 516 (543)
T 1nir_A 479 KRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLK 516 (543)
T ss_dssp CEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTE
T ss_pred CceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCce
Confidence 122677777776632 356778888876653
No 139
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.85 E-value=7.5e-20 Score=168.12 Aligned_cols=212 Identities=12% Similarity=0.097 Sum_probs=148.4
Q ss_pred ccceEEEEECCCCCcEEEEEec-CC-----cEEEEeCcCCcccCCCCCCCCc------e----ecccccccCCCcccEEE
Q 021160 34 SIRLNAIVIDPRNPNYFAVGGS-DE-----YARVYDIRKCHWYSPISSDTPV------D----TFCPRHLIGKNNIHITG 97 (316)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~~g~~-dg-----~v~~wd~~~~~~~~~~~~~~~~------~----~~~~~~~~~~~~~~i~~ 97 (316)
...+.+++|+|+| ++|++++. |+ .|++||+.+++........... . ....... ......+.+
T Consensus 36 ~~~~~~~~~SpdG-~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~ 113 (741)
T 2ecf_A 36 GPTLMKPKVAPDG-SRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQR-IAAMTGIVD 113 (741)
T ss_dssp CCCCEEEEECTTS-SEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC---------------------CCEESCC
T ss_pred CCCCCCceEecCC-CEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhh-hccccCcce
Confidence 4568999999999 88998887 88 8999999988632111000000 0 0000000 000034788
Q ss_pred EEEccCCCeEEEecCCcEEEEEcCCCCCCCCccCCccccccCC--CcceeeCCcCCceeeeEEEecCCCcEEEEeccCCe
Q 021160 98 LAYSNTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKRE--EPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGH 175 (316)
Q Consensus 98 ~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~ 175 (316)
++|+|+|++|+++.++.|++||+.++ . ....+..+... +..++| +|+|++|+.++ ++.
T Consensus 114 ~~~SpDg~~l~~~~~~~i~~~d~~~~----------------~~~~~~~l~~~~~~--~~~~~~-SPDG~~la~~~-~~~ 173 (741)
T 2ecf_A 114 YQWSPDAQRLLFPLGGELYLYDLKQE----------------GKAAVRQLTHGEGF--ATDAKL-SPKGGFVSFIR-GRN 173 (741)
T ss_dssp CEECTTSSEEEEEETTEEEEEESSSC----------------STTSCCBCCCSSSC--EEEEEE-CTTSSEEEEEE-TTE
T ss_pred eEECCCCCEEEEEeCCcEEEEECCCC----------------CcceEEEcccCCcc--cccccC-CCCCCEEEEEe-CCc
Confidence 99999999888876799999999875 2 34445556544 899999 99999999987 469
Q ss_pred EEEEeccCCeeEEEeecCccc----------------eEEEEEcCCCCeEEEEeCCC-----------------------
Q 021160 176 LFIWKKKGGKLVRLMVGDRHV----------------VNQLEPHPHIPMFATCGIEK----------------------- 216 (316)
Q Consensus 176 v~~wd~~~~~~~~~~~~~~~~----------------v~~~~~~p~~~~l~s~~~d~----------------------- 216 (316)
|++||+.+++.......+... +..++|+|++++|++++.|+
T Consensus 174 i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~ 253 (741)
T 2ecf_A 174 LWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRY 253 (741)
T ss_dssp EEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEEC
T ss_pred EEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeec
Confidence 999999988876554444332 47799999999999987765
Q ss_pred ----------cEEEecCCC-CCCCCCC---CCcccceeeeecCCCCceeEEec-----CCCeEEEEEecccC
Q 021160 217 ----------TVKLWAPMP-TDFPPLP---DNAEKIMKANKQGREDHSRITLT-----PDVIMHVLRLQRRQ 269 (316)
Q Consensus 217 ----------~i~iwd~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~s~~-----~d~~~~~w~~~~~~ 269 (316)
.|++||+.+ ++...+. .+...+.... | ++++.++..+ .+..|.+||+.+++
T Consensus 254 ~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~ 323 (741)
T 2ecf_A 254 PAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVN-W-RDPQHLSFQRQSRDQKKLDLVEVTLASNQ 323 (741)
T ss_dssp CBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEE-E-EETTEEEEEEEETTSSEEEEEEEETTTCC
T ss_pred CCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEE-e-CCCCEEEEEEecccCCeEEEEEEECCCCc
Confidence 789999988 7643322 3555565665 6 8888877554 35789999987764
No 140
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.84 E-value=1.8e-19 Score=150.41 Aligned_cols=222 Identities=9% Similarity=0.035 Sum_probs=151.5
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
.+.|++||+.+.+....+... ....+..++|+|++..+++++..++.|.+||+.+++..
T Consensus 20 ~~~v~~~d~~~~~~~~~~~~~----------~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~----------- 78 (349)
T 1jmx_B 20 PNNLHVVDVASDTVYKSCVMP----------DKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNT----------- 78 (349)
T ss_dssp TTEEEEEETTTTEEEEEEECS----------SCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEE-----------
T ss_pred CCeEEEEECCCCcEEEEEecC----------CCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEE-----------
Confidence 578999999887665555432 11246789999999334556667899999999987632
Q ss_pred cccccccCCC-----cccEEEEEEccCCCeEEEe-c------------CCcEEEEEcCCCCCCCCccCCccccccCCCcc
Q 021160 82 FCPRHLIGKN-----NIHITGLAYSNTSELLISY-N------------DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQ 143 (316)
Q Consensus 82 ~~~~~~~~~~-----~~~i~~~~~~~~~~~l~s~-~------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 143 (316)
..+...+ ...+..++|+|+|++++++ . ++.|.+||+.++. ..+...
T Consensus 79 ---~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~-------------~~~~~~ 142 (349)
T 1jmx_B 79 ---FHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGL-------------EAKPVR 142 (349)
T ss_dssp ---EEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGG-------------GBCCSE
T ss_pred ---EEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCcc-------------ccceee
Confidence 1111111 2346789999999977764 3 4899999998741 002223
Q ss_pred eeeCCcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCeeEEEeecCc-----------------------------
Q 021160 144 VYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR----------------------------- 194 (316)
Q Consensus 144 ~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~~----------------------------- 194 (316)
.+..+. . +.+++| +|+++ +++++. .|++||+.+++.+..+..+.
T Consensus 143 ~~~~~~-~--~~~~~~-s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (349)
T 1jmx_B 143 TFPMPR-Q--VYLMRA-ADDGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYT 215 (349)
T ss_dssp EEECCS-S--CCCEEE-CTTSC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEE
T ss_pred eccCCC-c--ccceeE-CCCCc-EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeee
Confidence 333322 2 888998 99999 555543 49999999888776664321
Q ss_pred ---------------------------------------cceEEEEEcC-CCCeEEEEeCCCcEEEecCCCCCC-CCCCC
Q 021160 195 ---------------------------------------HVVNQLEPHP-HIPMFATCGIEKTVKLWAPMPTDF-PPLPD 233 (316)
Q Consensus 195 ---------------------------------------~~v~~~~~~p-~~~~l~s~~~d~~i~iwd~~~~~~-~~~~~ 233 (316)
..+..++|+| ++++++++ ++.|.+||+.+++. ..+.
T Consensus 216 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~- 292 (349)
T 1jmx_B 216 IARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAAN- 292 (349)
T ss_dssp EEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEE-
T ss_pred eeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEc-
Confidence 1345677889 99998877 88999999988763 2322
Q ss_pred CcccceeeeecCCCCceeEEecCCCeEEEEEecccCcc
Q 021160 234 NAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTL 271 (316)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~~~ 271 (316)
....+..+. +++++..+++++.++.+.+||+.+.+..
T Consensus 293 ~~~~~~~~~-~s~dg~~l~~~~~~~~v~v~d~~~~~~~ 329 (349)
T 1jmx_B 293 LDHTYYCVA-FDKKGDKLYLGGTFNDLAVFNPDTLEKV 329 (349)
T ss_dssp CSSCCCEEE-ECSSSSCEEEESBSSEEEEEETTTTEEE
T ss_pred CCCCccceE-ECCCCCEEEEecCCCeEEEEecccccee
Confidence 122233444 7788887777888899999998876543
No 141
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.84 E-value=1.4e-19 Score=166.30 Aligned_cols=226 Identities=8% Similarity=0.035 Sum_probs=157.7
Q ss_pred eeEEEEeeCCCcceEEEeccccc--------------cccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCC--
Q 021160 4 FNMLFDLRSDSATRLFYCSSFSE--------------NSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKC-- 67 (316)
Q Consensus 4 ~v~vwd~~~~~~~~~~~~~~~~~--------------~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~-- 67 (316)
.|++||+.+.+...++....... ..+. .....|.+++|+|+| ++|++++. +.|++||+.++
T Consensus 65 ~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~SpDg-~~l~~~~~-~~i~~~d~~~~~~ 141 (741)
T 2ecf_A 65 DLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRI-AAMTGIVDYQWSPDA-QRLLFPLG-GELYLYDLKQEGK 141 (741)
T ss_dssp EEEEEETTTCCEEEEECGGGTC---------------------CCEESCCCEECTTS-SEEEEEET-TEEEEEESSSCST
T ss_pred EEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhh-ccccCcceeEECCCC-CEEEEEeC-CcEEEEECCCCCc
Confidence 89999998877655544321100 0000 000348899999999 78888876 99999999877
Q ss_pred -cccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEecCCcEEEEEcCCCCCCCCccCCccccccCCCcceee
Q 021160 68 -HWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYS 146 (316)
Q Consensus 68 -~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (316)
+. ..+ ..|...+..++|+|+|+.|+.+.++.|++||+.++ +..+...
T Consensus 142 ~~~---------------~~l-~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g----------------~~~~~~~ 189 (741)
T 2ecf_A 142 AAV---------------RQL-THGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASG----------------RQMQLTA 189 (741)
T ss_dssp TSC---------------CBC-CCSSSCEEEEEECTTSSEEEEEETTEEEEEETTTT----------------EEEECCC
T ss_pred ceE---------------EEc-ccCCcccccccCCCCCCEEEEEeCCcEEEEecCCC----------------CEEEecc
Confidence 41 111 45567899999999999998887889999999876 2222222
Q ss_pred CCcCC--------------ceeeeEEEecCCCcEEEEeccCC---------------------------------eEEEE
Q 021160 147 GHRNS--------------QTVKGVNFFGPNDEYVMSGSDCG---------------------------------HLFIW 179 (316)
Q Consensus 147 ~~~~~--------------~~i~~~~~~~~~~~~l~~~~~dg---------------------------------~v~~w 179 (316)
.+... ..+.+++| +|+|++|++++.|+ .|++|
T Consensus 190 ~~~~~~~~g~~~~v~~~~~~~~~~~~~-SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~ 268 (741)
T 2ecf_A 190 DGSTTIGNGIAEFVADEEMDRHTGYWW-APDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVI 268 (741)
T ss_dssp CCCSSEEESCCCHHHHHHSCCCCSEEE-CTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEE
T ss_pred CCccceeccccceeeeeccccccceEE-CCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEE
Confidence 22110 01477898 99999999987765 88999
Q ss_pred eccC-CeeEEEee--cCccceEEEEEcCCCCeEEEEeC-----CCcEEEecCCCCCCCCCC-CCccc---ceeeeecCCC
Q 021160 180 KKKG-GKLVRLMV--GDRHVVNQLEPHPHIPMFATCGI-----EKTVKLWAPMPTDFPPLP-DNAEK---IMKANKQGRE 247 (316)
Q Consensus 180 d~~~-~~~~~~~~--~~~~~v~~~~~~p~~~~l~s~~~-----d~~i~iwd~~~~~~~~~~-~~~~~---~~~~~~~~~~ 247 (316)
|+.+ ++...... .|...+..++| |+++.|+.++. +..|++||+.+++...+. .+... ......|+++
T Consensus 269 d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spd 347 (741)
T 2ecf_A 269 SPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDD 347 (741)
T ss_dssp CSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTT
T ss_pred ECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCC
Confidence 9998 87655443 37778999999 99999886653 567999999987733322 22211 1123347888
Q ss_pred CceeEEecCCCeEEEEEec
Q 021160 248 DHSRITLTPDVIMHVLRLQ 266 (316)
Q Consensus 248 ~~~~~s~~~d~~~~~w~~~ 266 (316)
++++++++.++..++|.+.
T Consensus 348 g~~~~~~~~~g~~~l~~~~ 366 (741)
T 2ecf_A 348 GSILWSSERTGFQHLYRID 366 (741)
T ss_dssp SCEEEEECTTSSCEEEEEC
T ss_pred CeEEEEecCCCccEEEEEc
Confidence 8888888999988888775
No 142
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.84 E-value=1.8e-19 Score=164.68 Aligned_cols=264 Identities=10% Similarity=0.051 Sum_probs=167.9
Q ss_pred eeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcC-----CcccCCCCCCC
Q 021160 3 LFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRK-----CHWYSPISSDT 77 (316)
Q Consensus 3 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~-----~~~~~~~~~~~ 77 (316)
+.|++||+.+.+...+. . |...+.+++|+|+| ++|+.+ .++.|++|++.+ ++.........
T Consensus 101 ~~i~~~d~~~~~~~~l~-~-----------~~~~~~~~~~SpdG-~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~ 166 (706)
T 2z3z_A 101 GGLVGFDMLARKVTYLF-D-----------TNEETASLDFSPVG-DRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGT 166 (706)
T ss_dssp TEEEEEETTTTEEEEEE-C-----------CTTCCTTCEECTTS-SEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCB
T ss_pred CEEEEEECCCCceEEcc-C-----------CcccccCCcCCCCC-CEEEEE-ECCeEEEEecCcccccCCCcEEeccCCC
Confidence 68999999776543222 1 34568889999999 788874 689999999988 65321110000
Q ss_pred -CceecccccccCCCcccEEEEEEccCCCeEEEec----------------------------------CCcEEEEEcCC
Q 021160 78 -PVDTFCPRHLIGKNNIHITGLAYSNTSELLISYN----------------------------------DELVYLFEKNM 122 (316)
Q Consensus 78 -~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~----------------------------------d~~i~iwd~~~ 122 (316)
.+..-.. ....+...+.+++|+|+|++|+++. +..|++||+.+
T Consensus 167 ~~~~~g~~--~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~ 244 (706)
T 2z3z_A 167 ETLVYGQA--VHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLAT 244 (706)
T ss_dssp TTEEESSC--CGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTT
T ss_pred CCeEcccc--hhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCC
Confidence 0000000 0011122357899999999777742 35799999987
Q ss_pred CCCCCCccCCccccccCCCcceee--CCcCCceeeeEEEecCCCcEEEEeccCC-----eEEEEeccCCeeEEEee-c-C
Q 021160 123 GLGPSPLSLSPEDLQKREEPQVYS--GHRNSQTVKGVNFFGPNDEYVMSGSDCG-----HLFIWKKKGGKLVRLMV-G-D 193 (316)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~~l~~~~~dg-----~v~~wd~~~~~~~~~~~-~-~ 193 (316)
+ +...... .+. ..+.+++| +|+|++|++++.++ .|++||+.+++....+. . +
T Consensus 245 ~----------------~~~~~~~~~~~~--~~~~~~~~-spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~ 305 (706)
T 2z3z_A 245 G----------------KTVYLQTGEPKE--KFLTNLSW-SPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETD 305 (706)
T ss_dssp T----------------EEEECCCCSCTT--CEEEEEEE-CTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEC
T ss_pred C----------------ceEeeccCCCCc--eeEeeEEE-ECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccC
Confidence 6 3222222 233 34899999 99999999987775 89999999983333332 2 2
Q ss_pred cc---ceEEEEEcC--CCCeEEEEeCCCcEEEecCC--CCCCCCCCCCcccceeeeecCCCCceeE-EecCCC----eEE
Q 021160 194 RH---VVNQLEPHP--HIPMFATCGIEKTVKLWAPM--PTDFPPLPDNAEKIMKANKQGREDHSRI-TLTPDV----IMH 261 (316)
Q Consensus 194 ~~---~v~~~~~~p--~~~~l~s~~~d~~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-s~~~d~----~~~ 261 (316)
.. .+..++|+| +++++++++.|+.++||.+. .+....+..+...+.....++++++.++ ++..++ .+.
T Consensus 306 ~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~ 385 (706)
T 2z3z_A 306 KHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFY 385 (706)
T ss_dssp SSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEE
T ss_pred CCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEE
Confidence 22 246789999 99999999999999999765 3335556656555555445888877665 444444 566
Q ss_pred EEEecccCcc-------ee-EEeeccccccccc----CCCCeEEEEeccCCC
Q 021160 262 VLRLQRRQTL-------AY-RERRYNAADFESD----EEEGETYLLGFSDSD 301 (316)
Q Consensus 262 ~w~~~~~~~~-------~~-~~~~~~~~~~~~~----~~~~~v~~~~~~~~~ 301 (316)
.|++.++... .. ..++|++..+... ...+.+++++...+.
T Consensus 386 ~~d~~~~~~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 386 CIDIKGGKTKDLTPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp EEETTCCCCEESCCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred EEEcCCCCceeccCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 6665544211 11 2567777666533 223568888876553
No 143
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.83 E-value=2.4e-19 Score=145.88 Aligned_cols=209 Identities=13% Similarity=0.142 Sum_probs=145.1
Q ss_pred ceeeEEEEeeC-CCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEe--cCCcEEEEeCc--CCcccCCCCCC
Q 021160 2 VLFNMLFDLRS-DSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGG--SDEYARVYDIR--KCHWYSPISSD 76 (316)
Q Consensus 2 ~g~v~vwd~~~-~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~--~dg~v~~wd~~--~~~~~~~~~~~ 76 (316)
.+.|++||+.+ .+...+.... +...+.+++|+|++ ++|++++ .++...||.++ +++
T Consensus 61 ~~~i~~~d~~~~~~~~~~~~~~----------~~~~~~~~~~spdg-~~l~~~~~~~~~~~~l~~~~~~~~~-------- 121 (297)
T 2ojh_A 61 EGLLYRLSLAGDPSPEKVDTGF----------ATICNNDHGISPDG-ALYAISDKVEFGKSAIYLLPSTGGT-------- 121 (297)
T ss_dssp TTEEEEEESSSCCSCEECCCTT----------CCCBCSCCEECTTS-SEEEEEECTTTSSCEEEEEETTCCC--------
T ss_pred CCeEEEEeCCCCCCceEecccc----------ccccccceEECCCC-CEEEEEEeCCCCcceEEEEECCCCc--------
Confidence 46799999987 6553332111 24678899999999 7888887 44556666554 332
Q ss_pred CCceecccccccCCCcccEEEEEEccCCCeEE-E-ecCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCcee
Q 021160 77 TPVDTFCPRHLIGKNNIHITGLAYSNTSELLI-S-YNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTV 154 (316)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-s-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 154 (316)
...+ .. ...+..++|+|+++.++ + ..++.+.+|+++... .....+..+... +
T Consensus 122 -------~~~~-~~-~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~---------------~~~~~~~~~~~~--~ 175 (297)
T 2ojh_A 122 -------PRLM-TK-NLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDS---------------GVETRLTHGEGR--N 175 (297)
T ss_dssp -------CEEC-CS-SSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTT---------------CCEEECCCSSSC--E
T ss_pred -------eEEe-ec-CCCccceEECCCCCEEEEEECCCCceEEEEEECCC---------------CcceEcccCCCc--c
Confidence 1111 22 22488899999999665 4 468999999865321 233445555544 8
Q ss_pred eeEEEecCCCcEEEEec-cCCeEEEEecc-CCeeEEEeecCccceEEEEEcCCCCeEEEEeCC-----------CcEEEe
Q 021160 155 KGVNFFGPNDEYVMSGS-DCGHLFIWKKK-GGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIE-----------KTVKLW 221 (316)
Q Consensus 155 ~~~~~~~~~~~~l~~~~-~dg~v~~wd~~-~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d-----------~~i~iw 221 (316)
.+++| +|++++++.++ .++.+++|++. .+..+..+..|...+..++|+|++++|++++.+ +.|++|
T Consensus 176 ~~~~~-s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~ 254 (297)
T 2ojh_A 176 DGPDY-SPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLM 254 (297)
T ss_dssp EEEEE-CTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEE
T ss_pred ccceE-CCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEE
Confidence 99999 99999887765 58899999986 566677787788889999999999998888765 569999
Q ss_pred cCCCCCCCCCC---CCcccceeeeecCCCCceeEEecCC
Q 021160 222 APMPTDFPPLP---DNAEKIMKANKQGREDHSRITLTPD 257 (316)
Q Consensus 222 d~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~s~~~d 257 (316)
|+.+++...+. +|...+.... |++++..+++++.+
T Consensus 255 d~~~~~~~~~~~~~~~~~~~~~~~-~spdg~~l~~~~~~ 292 (297)
T 2ojh_A 255 DMDGGNVETLFDLFGGQGTMNSPN-WSPDGDEFAYVRYF 292 (297)
T ss_dssp ETTSCSCEEEEEEEESTTTSCSCC-BCTTSSEEEEEEEC
T ss_pred ecCCCCceeeeccCCCCcccccce-ECCCCCEEEEEEec
Confidence 99887643322 4444554444 77888877766654
No 144
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.82 E-value=3.5e-19 Score=162.83 Aligned_cols=259 Identities=11% Similarity=0.054 Sum_probs=165.3
Q ss_pred eEEEEeeCCCc--ceEEEecccc------ccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCC
Q 021160 5 NMLFDLRSDSA--TRLFYCSSFS------ENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSD 76 (316)
Q Consensus 5 v~vwd~~~~~~--~~~~~~~~~~------~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~ 76 (316)
| +||+.+.+. ..++...... +.. ...+...|.+++|+|++ .++++ .++.|++||+.+++..
T Consensus 46 i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~-~~~~~~~v~~~~~spd~-~~~~~--~~~~i~~~d~~~~~~~------ 114 (706)
T 2z3z_A 46 L-VFNKANGKSAQTTRFSAADLNALMPEGCKF-QTTDAFPSFRTLDAGRG-LVVLF--TQGGLVGFDMLARKVT------ 114 (706)
T ss_dssp E-EEEC-------CEEEEHHHHHTTC------------CCCEEEEETTTT-EEEEE--ETTEEEEEETTTTEEE------
T ss_pred E-EEECCCCcEeeEEeechhHhhhhccchhcc-ccccccCceeEEECCCC-eEEEE--ECCEEEEEECCCCceE------
Confidence 7 999998876 4444322110 000 00012469999999984 55544 3599999999887521
Q ss_pred CCceecccccccCCCcccEEEEEEccCCCeEEEecCCcEEEEEcCC-----CCCCCCccCCccccccCCCcceeeCCcCC
Q 021160 77 TPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDELVYLFEKNM-----GLGPSPLSLSPEDLQKREEPQVYSGHRNS 151 (316)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d~~i~iwd~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (316)
.+ ..+...+.+++|+|+|+.|+.+.++.|++||+.+ + +..+....+...
T Consensus 115 ---------~l-~~~~~~~~~~~~SpdG~~la~~~~~~i~v~~~~~~~~~~g----------------~~~~~~~~~~~~ 168 (706)
T 2z3z_A 115 ---------YL-FDTNEETASLDFSPVGDRVAYVRNHNLYIARGGKLGEGMS----------------RAIAVTIDGTET 168 (706)
T ss_dssp ---------EE-ECCTTCCTTCEECTTSSEEEEEETTEEEEEECBCTTSCCC----------------CCEESCSCCBTT
T ss_pred ---------Ec-cCCcccccCCcCCCCCCEEEEEECCeEEEEecCcccccCC----------------CcEEeccCCCCC
Confidence 11 2334567789999999988888899999999987 5 222222222111
Q ss_pred ------------ceeeeEEEecCCCcEEEEec---------------------------------cCCeEEEEeccCCee
Q 021160 152 ------------QTVKGVNFFGPNDEYVMSGS---------------------------------DCGHLFIWKKKGGKL 186 (316)
Q Consensus 152 ------------~~i~~~~~~~~~~~~l~~~~---------------------------------~dg~v~~wd~~~~~~ 186 (316)
..+.++.| +|+|++|++++ .+..|++||+.+++.
T Consensus 169 ~~~g~~~~~ee~~~~~~~~~-SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~ 247 (706)
T 2z3z_A 169 LVYGQAVHQREFGIEKGTFW-SPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKT 247 (706)
T ss_dssp EEESSCCGGGCTTCCCSEEE-CTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEE
T ss_pred eEcccchhhhhcCCCceEEE-CCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCce
Confidence 11478898 99999999987 446799999998886
Q ss_pred EEEee--cCccceEEEEEcCCCCeEEEEeCCC-----cEEEecCCCC-CCCCCCCC--ccc--ceeeeecCC--CCceeE
Q 021160 187 VRLMV--GDRHVVNQLEPHPHIPMFATCGIEK-----TVKLWAPMPT-DFPPLPDN--AEK--IMKANKQGR--EDHSRI 252 (316)
Q Consensus 187 ~~~~~--~~~~~v~~~~~~p~~~~l~s~~~d~-----~i~iwd~~~~-~~~~~~~~--~~~--~~~~~~~~~--~~~~~~ 252 (316)
..... .|...+.+++|+|+++.|++++.++ .|++||+.++ ....+... ... ......+++ ++.+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~ 327 (706)
T 2z3z_A 248 VYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIW 327 (706)
T ss_dssp EECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEE
T ss_pred EeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEE
Confidence 54442 4667899999999999998887775 8999999887 33322211 111 112234777 888999
Q ss_pred EecCCCeEEEEEec-ccCcc---------ee--EEeecccccccc-cCCCC----eEEEEeccCCC
Q 021160 253 TLTPDVIMHVLRLQ-RRQTL---------AY--RERRYNAADFES-DEEEG----ETYLLGFSDSD 301 (316)
Q Consensus 253 s~~~d~~~~~w~~~-~~~~~---------~~--~~~~~~~~~~~~-~~~~~----~v~~~~~~~~~ 301 (316)
++..++.+++|.+. .+... .. ..++|++..+.. ..+++ .|+.++...+.
T Consensus 328 ~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~ 393 (706)
T 2z3z_A 328 QSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK 393 (706)
T ss_dssp EECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC
T ss_pred EEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC
Confidence 99999999999876 22111 11 245666655532 23333 67888776553
No 145
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.81 E-value=3.6e-18 Score=156.50 Aligned_cols=223 Identities=5% Similarity=-0.056 Sum_probs=149.1
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
.+.|.+||+.+.+.. .+... .+|...+..++|+|+| +.|+.++. +.|++||+.+++....
T Consensus 90 ~~~i~~~d~~~~~~~-~l~~~--------~~~~~~~~~~~~SPdG-~~la~~~~-~~i~~~~~~~g~~~~~--------- 149 (723)
T 1xfd_A 90 TGYYVLSKIPHGDPQ-SLDPP--------EVSNAKLQYAGWGPKG-QQLIFIFE-NNIYYCAHVGKQAIRV--------- 149 (723)
T ss_dssp CSEEEEEESSSCCCE-ECCCT--------TCCSCCCSBCCBCSST-TCEEEEET-TEEEEESSSSSCCEEE---------
T ss_pred eeeEEEEECCCCceE-eccCC--------ccccccccccEECCCC-CEEEEEEC-CeEEEEECCCCceEEE---------
Confidence 378899999887652 22111 1355568899999999 78888776 7999999988762211
Q ss_pred cccccccCCCcc------------------cEEEEEEccCCCeEEEe-cC-C----------------------------
Q 021160 82 FCPRHLIGKNNI------------------HITGLAYSNTSELLISY-ND-E---------------------------- 113 (316)
Q Consensus 82 ~~~~~~~~~~~~------------------~i~~~~~~~~~~~l~s~-~d-~---------------------------- 113 (316)
. ..+.. .+.+++|+|+|+.|+.+ .| .
T Consensus 150 -----~-~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 223 (723)
T 1xfd_A 150 -----V-STGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGS 223 (723)
T ss_dssp -----E-CCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTS
T ss_pred -----e-cCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCC
Confidence 1 11111 23789999999977774 33 2
Q ss_pred -----cEEEEEcCCCCCCCCccCCccccccCCCcceeeCCc----CCceeeeEEEecCCCcEEEEecc----CCeEEEEe
Q 021160 114 -----LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHR----NSQTVKGVNFFGPNDEYVMSGSD----CGHLFIWK 180 (316)
Q Consensus 114 -----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~l~~~~~----dg~v~~wd 180 (316)
.|++||+.++ +....+..+. ....+.+++| +|+|+++++.+. +..|++||
T Consensus 224 ~~~~~~l~~~d~~~~----------------~~~~~l~~~~~~~~~~~~~~~~~~-SpDg~~l~~~~~~~~~~~~i~~~d 286 (723)
T 1xfd_A 224 ENPSISLHVIGLNGP----------------THDLEMMPPDDPRMREYYITMVKW-ATSTKVAVTWLNRAQNVSILTLCD 286 (723)
T ss_dssp CCCEEEEEEEESSSS----------------CCCEECCCCCCGGGSSEEEEEEEE-SSSSEEEEEEEETTSCEEEEEEEE
T ss_pred CCCeeEEEEEECCCC----------------ceeEEeeCCccCCCccceeEEEEE-eCCCeEEEEEEcCCCCeEEEEEEe
Confidence 5777777665 3334444331 1134889999 999998877653 35799999
Q ss_pred ccCCeeEEEeec-Cccce----EEEEEcCCCCeEEE--EeCCC------cEEEec-CCCCC---CCCCCCCcccceeeee
Q 021160 181 KKGGKLVRLMVG-DRHVV----NQLEPHPHIPMFAT--CGIEK------TVKLWA-PMPTD---FPPLPDNAEKIMKANK 243 (316)
Q Consensus 181 ~~~~~~~~~~~~-~~~~v----~~~~~~p~~~~l~s--~~~d~------~i~iwd-~~~~~---~~~~~~~~~~~~~~~~ 243 (316)
+.+++....+.. +...+ ..++|+|+|+.|+. +..++ .|.+|| ..++. ...+......+.....
T Consensus 287 ~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~ 366 (723)
T 1xfd_A 287 ATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILA 366 (723)
T ss_dssp TTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEE
T ss_pred CCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeE
Confidence 999987766643 33333 37899999998664 44666 577788 45555 5555543344444445
Q ss_pred cCCCCceeEEecCC---CeEEEEEecc
Q 021160 244 QGREDHSRITLTPD---VIMHVLRLQR 267 (316)
Q Consensus 244 ~~~~~~~~~s~~~d---~~~~~w~~~~ 267 (316)
|+++++.++..+.+ +.+++|++..
T Consensus 367 ~spdg~~l~~~~~~~~~~~~~l~~~~~ 393 (723)
T 1xfd_A 367 YDEKGNKIYFLSTEDLPRRRQLYSANT 393 (723)
T ss_dssp EETTTTEEEEEESSSCTTCCEEEEECS
T ss_pred EcCCCCEEEEEEcCCCCcceEEEEEeC
Confidence 88988887655444 7899999864
No 146
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.80 E-value=4.8e-19 Score=162.28 Aligned_cols=234 Identities=11% Similarity=0.104 Sum_probs=149.2
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEec---------CCcEEEEeCcCCcccCC
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGS---------DEYARVYDIRKCHWYSP 72 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~---------dg~v~~wd~~~~~~~~~ 72 (316)
+|.|++||+.+.+...++..+... ...+.+++|+|+| ++|+.++. ++.|++||+.+++...
T Consensus 35 d~~i~~~~~~~g~~~~~~~~~~~~--------~~~~~~~~~SpDg-~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~- 104 (719)
T 1z68_A 35 DNNIVLYNIETGQSYTILSNRTMK--------SVNASNYGLSPDR-QFVYLESDYSKLWRYSYTATYYIYDLSNGEFVR- 104 (719)
T ss_dssp TSCEEEEESSSCCEEEEECHHHHH--------TTTCSEEEECTTS-SEEEEEEEEEECSSSCEEEEEEEEETTTTEECC-
T ss_pred CCCEEEEEcCCCcEEEEEcccccc--------ccceeeEEECCCC-CeEEEEecCceeEEeecceEEEEEECCCCcccc-
Confidence 578999999988765544322110 0138899999999 78888765 7899999999887310
Q ss_pred CCCCCCceecccccccCCCcccEEEEEEccCCCeEEEecCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCC-
Q 021160 73 ISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNS- 151 (316)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 151 (316)
...+ ...+..++|+|+|+.|+.+.++.|++|++.++... .+. ........+.++...
T Consensus 105 -----------~~~l----~~~~~~~~~SPDG~~la~~~~~~i~~~~~~~g~~~---~l~----~~~~~~~v~~g~~~~v 162 (719)
T 1z68_A 105 -----------GNEL----PRPIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPF---QIT----FNGRENKIFNGIPDWV 162 (719)
T ss_dssp -----------SSCC----CSSBCCEEECSSTTCEEEEETTEEEEESSTTSCCE---ECC----CCCBTTTEEESSCCHH
T ss_pred -----------ceec----CcccccceECCCCCEEEEEECCeEEEEeCCCCCcE---EEe----cCCCcCCeEcccccce
Confidence 0111 13577899999999999888999999999876200 000 000001112222211
Q ss_pred ------ceeeeEEEecCCCcEEEEeccCC----------------------------------eEEEEeccCCeeE---E
Q 021160 152 ------QTVKGVNFFGPNDEYVMSGSDCG----------------------------------HLFIWKKKGGKLV---R 188 (316)
Q Consensus 152 ------~~i~~~~~~~~~~~~l~~~~~dg----------------------------------~v~~wd~~~~~~~---~ 188 (316)
....+++| +|||++|++++.|. .|++||+.+++.. .
T Consensus 163 ~~ee~~~~~~~~~w-SPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~ 241 (719)
T 1z68_A 163 YEEEMLATKYALWW-SPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQE 241 (719)
T ss_dssp HHHHTTCSSCCEEE-CTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEE
T ss_pred eeeecccCcccEEE-CCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeE
Confidence 00257898 99999999987652 7889999887642 1
Q ss_pred -----EeecCccceEEEEEcCCCCeEEEEeCC----CcEEEec----CCCCCCCCCC-----CCcccce----eeeecCC
Q 021160 189 -----LMVGDRHVVNQLEPHPHIPMFATCGIE----KTVKLWA----PMPTDFPPLP-----DNAEKIM----KANKQGR 246 (316)
Q Consensus 189 -----~~~~~~~~v~~~~~~p~~~~l~s~~~d----~~i~iwd----~~~~~~~~~~-----~~~~~~~----~~~~~~~ 246 (316)
.+.+|...+..++|+|+++++++.... ..|.+|| +.+++...+. .+...+. ....|++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~sp 321 (719)
T 1z68_A 242 VPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSY 321 (719)
T ss_dssp CCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECT
T ss_pred ccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECC
Confidence 123577889999999998777664422 2488899 7776644333 3333332 1334788
Q ss_pred CCceeE--EecCCCe--EEEEEeccc
Q 021160 247 EDHSRI--TLTPDVI--MHVLRLQRR 268 (316)
Q Consensus 247 ~~~~~~--s~~~d~~--~~~w~~~~~ 268 (316)
+++.++ +...++. +.+|++..+
T Consensus 322 dg~~l~~~~~~~~g~~~l~~~~~~~~ 347 (719)
T 1z68_A 322 DAISYYKIFSDKDGYKHIHYIKDTVE 347 (719)
T ss_dssp TSSCEEEEEECTTSCEEEEEESSCST
T ss_pred CCCeEEEEEEccCCceEEEEEECCCC
Confidence 887544 3445554 555555443
No 147
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.80 E-value=2.4e-17 Score=137.82 Aligned_cols=233 Identities=9% Similarity=0.024 Sum_probs=162.6
Q ss_pred ccceEEEEECCCCCcEEEEEec-------CCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCC-
Q 021160 34 SIRLNAIVIDPRNPNYFAVGGS-------DEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE- 105 (316)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~~g~~-------dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~- 105 (316)
...+..++|+|++ +++++++. ++.|.+||..+++.. ..+ . ....+..++|+|+|+
T Consensus 40 ~~~~~~~~~s~dg-~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~--------------~~~-~-~~~~~~~~~~s~dg~~ 102 (353)
T 3vgz_A 40 GKGAYEMAYSQQE-NALWLATSQSRKLDKGGVVYRLDPVTLEVT--------------QAI-H-NDLKPFGATINNTTQT 102 (353)
T ss_dssp ESSEEEEEEETTT-TEEEEEECCCTTTEESEEEEEECTTTCCEE--------------EEE-E-ESSCCCSEEEETTTTE
T ss_pred ccCccceEECCCC-CEEEEEcCCCcCCCCCccEEEEcCCCCeEE--------------EEE-e-cCCCcceEEECCCCCE
Confidence 4468899999998 66666653 578999999988632 111 1 123366789999998
Q ss_pred eEEEe-cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCC-------ceeeeEEEecCCCcEEEEec--cCCe
Q 021160 106 LLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNS-------QTVKGVNFFGPNDEYVMSGS--DCGH 175 (316)
Q Consensus 106 ~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~i~~~~~~~~~~~~l~~~~--~dg~ 175 (316)
++++. .++.|.+||..++ +....+..+... ..+.+++| +|+++++++++ .++.
T Consensus 103 l~v~~~~~~~v~~~d~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-s~dg~~l~~~~~~~~~~ 165 (353)
T 3vgz_A 103 LWFGNTVNSAVTAIDAKTG----------------EVKGRLVLDDRKRTEEVRPLQPRELVA-DDATNTVYISGIGKESV 165 (353)
T ss_dssp EEEEETTTTEEEEEETTTC----------------CEEEEEESCCCCCCSSCCCCEEEEEEE-ETTTTEEEEEEESSSCE
T ss_pred EEEEecCCCEEEEEeCCCC----------------eeEEEEecCCCccccccCCCCCceEEE-CCCCCEEEEEecCCCce
Confidence 44554 5799999999887 455555543321 12678998 99999877766 4889
Q ss_pred EEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCCC-CCCCC----CcccceeeeecCCCCce
Q 021160 176 LFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLPD----NAEKIMKANKQGREDHS 250 (316)
Q Consensus 176 v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~ 250 (316)
|.+||+.+++.+..+..+...+..++|+|+++.+++++.++.|.+||+.+++. ..+.. +...+..+. ++++++.
T Consensus 166 i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~s~dg~~ 244 (353)
T 3vgz_A 166 IWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINIS-LDTARQR 244 (353)
T ss_dssp EEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEE-EETTTTE
T ss_pred EEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEE-ECCCCCE
Confidence 99999999999888875666688999999999999999999999999988762 22211 222222333 6777765
Q ss_pred e-EEecCCCeEEEEEecccCcceeE--------Eeecccccc-cccCCCCeEEEEeccCCC
Q 021160 251 R-ITLTPDVIMHVLRLQRRQTLAYR--------ERRYNAADF-ESDEEEGETYLLGFSDSD 301 (316)
Q Consensus 251 ~-~s~~~d~~~~~w~~~~~~~~~~~--------~~~~~~~~~-~~~~~~~~v~~~~~~~~~ 301 (316)
+ ++...++.+.+||+.+++..... .+.+++..+ .+...++.|.++|...+.
T Consensus 245 l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~ 305 (353)
T 3vgz_A 245 AFITDSKAAEVLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVTHRQAGKVSVIDAKSYK 305 (353)
T ss_dssp EEEEESSSSEEEEEETTTCCEEEEEECSSCCCEEEETTTTEEEEEETTTTEEEEEETTTTE
T ss_pred EEEEeCCCCEEEEEECCCCcEEEEEEcCCCceEEECCCCCEEEEEECCCCeEEEEECCCCe
Confidence 4 45555699999999776443222 455555533 344467778888876554
No 148
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.80 E-value=1.3e-18 Score=165.52 Aligned_cols=193 Identities=8% Similarity=0.002 Sum_probs=152.8
Q ss_pred CccceEEEEEC-CCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcc-cEEEEEEccCCCeEEE-
Q 021160 33 NSIRLNAIVID-PRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNI-HITGLAYSNTSELLIS- 109 (316)
Q Consensus 33 h~~~v~~~~~~-~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~s- 109 (316)
|...+.+++|+ |++ +++++++ ++.+.+|++..++. ..+ ..|.. .+..++|+ +|+.++.
T Consensus 294 ~~~~v~~~~~S~pdG-~~la~~~-~~~i~~~~~~~~~~---------------~~~-~~~~~~~~~~~~~s-dg~~l~~~ 354 (1045)
T 1k32_A 294 SIPSKFAEDFSPLDG-DLIAFVS-RGQAFIQDVSGTYV---------------LKV-PEPLRIRYVRRGGD-TKVAFIHG 354 (1045)
T ss_dssp ECGGGGEEEEEECGG-GCEEEEE-TTEEEEECTTSSBE---------------EEC-SCCSCEEEEEECSS-SEEEEEEE
T ss_pred cccccceeeecCCCC-CEEEEEE-cCEEEEEcCCCCce---------------EEc-cCCCcceEEeeeEc-CCCeEEEE
Confidence 45578999999 999 7888777 78999999987642 112 44555 88999999 9987766
Q ss_pred ecCCcEE-EEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCeeEE
Q 021160 110 YNDELVY-LFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVR 188 (316)
Q Consensus 110 ~~d~~i~-iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~ 188 (316)
+.+..+. +|++..+ . ...+.++... +..++| +|+|++|++++.++.|++||+.+++...
T Consensus 355 s~~~~l~~~~d~~~~----------------~-~~~l~~~~~~--~~~~~~-SpDG~~la~~~~~~~v~~~d~~tg~~~~ 414 (1045)
T 1k32_A 355 TREGDFLGIYDYRTG----------------K-AEKFEENLGN--VFAMGV-DRNGKFAVVANDRFEIMTVDLETGKPTV 414 (1045)
T ss_dssp ETTEEEEEEEETTTC----------------C-EEECCCCCCS--EEEEEE-CTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred ECCCceEEEEECCCC----------------C-ceEecCCccc--eeeeEE-CCCCCEEEEECCCCeEEEEECCCCceEE
Confidence 4566788 8898765 2 2334455544 899999 9999999999999999999999999888
Q ss_pred EeecCccceEEEEEcCCCCeEEEEeCCC----------cEEEecCCCCCCCCCCCCcccceeeeecCCCCceeEEecCCC
Q 021160 189 LMVGDRHVVNQLEPHPHIPMFATCGIEK----------TVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLTPDV 258 (316)
Q Consensus 189 ~~~~~~~~v~~~~~~p~~~~l~s~~~d~----------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~ 258 (316)
.+.+|...+.+++|+|++++|++++.++ .|++||+.+++...+..+...+.... |+++++.++..+.++
T Consensus 415 ~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~-~spdG~~l~~~s~~~ 493 (1045)
T 1k32_A 415 IERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPA-FDADSKNLYYLSYRS 493 (1045)
T ss_dssp EEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEE-ECTTSCEEEEEESCC
T ss_pred eccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEeeCCCcccCCce-EcCCCCEEEEEeccc
Confidence 7778988999999999999998887654 89999999887666666666655544 889999988888877
Q ss_pred eEEEEEe
Q 021160 259 IMHVLRL 265 (316)
Q Consensus 259 ~~~~w~~ 265 (316)
...+|+.
T Consensus 494 ~~~~~~~ 500 (1045)
T 1k32_A 494 LDPSPDR 500 (1045)
T ss_dssp CCCEECS
T ss_pred CCcCcch
Confidence 6666653
No 149
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.79 E-value=1.7e-17 Score=138.08 Aligned_cols=221 Identities=11% Similarity=0.066 Sum_probs=141.3
Q ss_pred eeeEEEEee--CCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEe-cCCcEEEEeCcCCcccCCCCCCCCc
Q 021160 3 LFNMLFDLR--SDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGG-SDEYARVYDIRKCHWYSPISSDTPV 79 (316)
Q Consensus 3 g~v~vwd~~--~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~-~dg~v~~wd~~~~~~~~~~~~~~~~ 79 (316)
|.|++|++. +.+........ ....+..++|+|++ +++++++ .++.|.+||+..+... .
T Consensus 60 ~~v~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~s~dg-~~l~~~~~~~~~i~~~d~~~~~~~------~-- 120 (343)
T 1ri6_A 60 FRVLAYRIAPDDGALTFAAESA----------LPGSLTHISTDHQG-QFVFVGSYNAGNVSVTRLEDGLPV------G-- 120 (343)
T ss_dssp TEEEEEEECTTTCCEEEEEEEE----------CSSCCSEEEECTTS-SEEEEEETTTTEEEEEEEETTEEE------E--
T ss_pred CeEEEEEecCCCCceeeccccc----------cCCCCcEEEEcCCC-CEEEEEecCCCeEEEEECCCCccc------c--
Confidence 789999997 33332222221 12267899999999 6665554 5889999999532200 0
Q ss_pred eecccccccCCCcccEEEEEEccCCCeEEE-e-cCCcEEEEEcCC-CCCCCCccCCccccccCCCcc----eeeCCcCCc
Q 021160 80 DTFCPRHLIGKNNIHITGLAYSNTSELLIS-Y-NDELVYLFEKNM-GLGPSPLSLSPEDLQKREEPQ----VYSGHRNSQ 152 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s-~-~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 152 (316)
....+ .. ...+.+++|+|+++++++ + .++.|.+||+.. + +... .+..+.. .
T Consensus 121 ---~~~~~-~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~----------------~~~~~~~~~~~~~~~-~ 178 (343)
T 1ri6_A 121 ---VVDVV-EG-LDGCHSANISPDNRTLWVPALKQDRICLFTVSDDG----------------HLVAQDPAEVTTVEG-A 178 (343)
T ss_dssp ---EEEEE-CC-CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTS----------------CEEEEEEEEEECSTT-C
T ss_pred ---ccccc-cC-CCCceEEEECCCCCEEEEecCCCCEEEEEEecCCC----------------ceeeecccccccCCC-C
Confidence 11111 22 235788999999985555 4 699999999976 4 2211 2222221 2
Q ss_pred eeeeEEEecCCCcEEEEe-ccCCeEEEEeccC--Cee--EEEee---c-C--ccceEEEEEcCCCCeEE-EEeCCCcEEE
Q 021160 153 TVKGVNFFGPNDEYVMSG-SDCGHLFIWKKKG--GKL--VRLMV---G-D--RHVVNQLEPHPHIPMFA-TCGIEKTVKL 220 (316)
Q Consensus 153 ~i~~~~~~~~~~~~l~~~-~~dg~v~~wd~~~--~~~--~~~~~---~-~--~~~v~~~~~~p~~~~l~-s~~~d~~i~i 220 (316)
.+..++| +|++++++++ ..++.+.+|++.. ++. ...+. . + ...+..++|+|++++|+ ++..++.|++
T Consensus 179 ~~~~~~~-~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v 257 (343)
T 1ri6_A 179 GPRHMVF-HPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITV 257 (343)
T ss_dssp CEEEEEE-CTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred CcceEEE-CCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEE
Confidence 3788999 9999977554 5799999999953 433 22222 1 1 23566899999998866 5557899999
Q ss_pred ecCC--CCC---CCCCCCCcccceeeeecCCCCceeEEec-CCCeEEEEEecc
Q 021160 221 WAPM--PTD---FPPLPDNAEKIMKANKQGREDHSRITLT-PDVIMHVLRLQR 267 (316)
Q Consensus 221 wd~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~s~~-~d~~~~~w~~~~ 267 (316)
|++. ++. +..+..+.. +..+. +++++++++.++ .++.+.+|++..
T Consensus 258 ~d~~~~~~~~~~~~~~~~~~~-~~~~~-~s~dg~~l~~~~~~~~~v~v~~~d~ 308 (343)
T 1ri6_A 258 FSVSEDGSVLSKEGFQPTETQ-PRGFN-VDHSGKYLIAAGQKSHHISVYEIVG 308 (343)
T ss_dssp EEECTTSCCEEEEEEEECSSS-CCCEE-ECTTSSEEEEECTTTCEEEEEEEET
T ss_pred EEEcCCCCceEEeeeecCCCc-cceEE-ECCCCCEEEEecCCCCeEEEEEEcC
Confidence 9998 332 222222222 33344 778888776666 689999997763
No 150
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.79 E-value=2e-17 Score=157.44 Aligned_cols=247 Identities=7% Similarity=0.028 Sum_probs=175.6
Q ss_pred eeeEEEEeeCCCcceEEEeccccccccCCCCcc-ceEEEEECCCCCcEEEEEecCCcEE-EEeCcCCcccCCCCCCCCce
Q 021160 3 LFNMLFDLRSDSATRLFYCSSFSENSKQPMNSI-RLNAIVIDPRNPNYFAVGGSDEYAR-VYDIRKCHWYSPISSDTPVD 80 (316)
Q Consensus 3 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~-~v~~~~~~~~~~~~l~~g~~dg~v~-~wd~~~~~~~~~~~~~~~~~ 80 (316)
+.|.+|++....... . ..|.. .+..++|+ ++ ..|+.++.+..+. +|++.+++
T Consensus 317 ~~i~~~~~~~~~~~~---~---------~~~~~~~~~~~~~s-dg-~~l~~~s~~~~l~~~~d~~~~~------------ 370 (1045)
T 1k32_A 317 GQAFIQDVSGTYVLK---V---------PEPLRIRYVRRGGD-TK-VAFIHGTREGDFLGIYDYRTGK------------ 370 (1045)
T ss_dssp TEEEEECTTSSBEEE---C---------SCCSCEEEEEECSS-SE-EEEEEEETTEEEEEEEETTTCC------------
T ss_pred CEEEEEcCCCCceEE---c---------cCCCcceEEeeeEc-CC-CeEEEEECCCceEEEEECCCCC------------
Confidence 567777776543211 1 12555 79999999 88 7888888888888 88988664
Q ss_pred ecccccccCCCcccEEEEEEccCCCeEEE-ecCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEE
Q 021160 81 TFCPRHLIGKNNIHITGLAYSNTSELLIS-YNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNF 159 (316)
Q Consensus 81 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~s-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 159 (316)
...+ ..|...+..++|+|+|+.|++ +.++.|++||+.++ +....+.+|... +.+++|
T Consensus 371 ---~~~l-~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg----------------~~~~~~~~~~~~--v~~~~~ 428 (1045)
T 1k32_A 371 ---AEKF-EENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETG----------------KPTVIERSREAM--ITDFTI 428 (1045)
T ss_dssp ---EEEC-CCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTC----------------CEEEEEECSSSC--CCCEEE
T ss_pred ---ceEe-cCCccceeeeEECCCCCEEEEECCCCeEEEEECCCC----------------ceEEeccCCCCC--ccceEE
Confidence 2223 266778999999999998877 47899999999887 555555577755 899999
Q ss_pred ecCCCcEEEEeccCC----------eEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCCC-
Q 021160 160 FGPNDEYVMSGSDCG----------HLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF- 228 (316)
Q Consensus 160 ~~~~~~~l~~~~~dg----------~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~~- 228 (316)
+|+|++|++++.++ .|++||+.+++ ...+..|...+..++|+|++++|+.++.++..++|+......
T Consensus 429 -SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~ 506 (1045)
T 1k32_A 429 -SDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFS 506 (1045)
T ss_dssp -CTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEE
T ss_pred -CCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhccccc
Confidence 99999998887654 89999999888 667777888899999999999999998877777776432110
Q ss_pred -------------------------------------------CCCCCCcccceeeeecCCCCceeEE------------
Q 021160 229 -------------------------------------------PPLPDNAEKIMKANKQGREDHSRIT------------ 253 (316)
Q Consensus 229 -------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~s------------ 253 (316)
..+..+...+.. ..+++++..+++
T Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~-~~~s~dg~~~~~~~~~g~~~~~~~ 585 (1045)
T 1k32_A 507 FEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRM-IIPLESSILIYSVPVHGEFAAYYQ 585 (1045)
T ss_dssp CCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEE-EEECSSEEEEEECCCCCSHHHHHH
T ss_pred cccCceeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCCCCChhh-eEEcCCCeEEEEecccCccccccc
Confidence 111112222222 235667766664
Q ss_pred -ecCCCeEEEEEecccCccee------EEeecccccccccCCCCeEEEEeccCCC
Q 021160 254 -LTPDVIMHVLRLQRRQTLAY------RERRYNAADFESDEEEGETYLLGFSDSD 301 (316)
Q Consensus 254 -~~~d~~~~~w~~~~~~~~~~------~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 301 (316)
......+.+||+.+++.... ..++|++..+....++ .+.+|+...+.
T Consensus 586 ~~~~~~~l~~~d~~~~~~~~l~~~v~~~~~S~DG~~l~~~~~~-~i~~~d~~~~~ 639 (1045)
T 1k32_A 586 GAPEKGVLLKYDVKTRKVTEVKNNLTDLRLSADRKTVMVRKDD-GKIYTFPLEKP 639 (1045)
T ss_dssp CCCCCEEEEEEETTTCCEEEEEEEEEEEEECTTSCEEEEEETT-SCEEEEESSCT
T ss_pred ccCCCceEEEEECCCCcEEEeecCcceEEECCCCCEEEEEcCC-cEEEEeCccCc
Confidence 22345777888777654322 2678888887766544 69999997765
No 151
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.79 E-value=9e-17 Score=133.27 Aligned_cols=226 Identities=6% Similarity=0.013 Sum_probs=152.4
Q ss_pred EEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEE-Ee-cCCcEEE
Q 021160 40 IVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLI-SY-NDELVYL 117 (316)
Q Consensus 40 ~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-s~-~d~~i~i 117 (316)
..|.+++...+++++.++.|.+||+.+++. ...+ ..+.... .++|+|+|++++ ++ .++.|.+
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~--------------~~~~-~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~ 66 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEI--------------LNQI-TLGYDFV-DTAITSDCSNVVVTSDFCQTLVQ 66 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCE--------------EEEE-ECCCCEE-EEEECSSSCEEEEEESTTCEEEE
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccce--------------eeeE-EccCCcc-eEEEcCCCCEEEEEeCCCCeEEE
Confidence 456666646788888999999999998873 2222 2234445 999999998444 44 4889999
Q ss_pred EEcCCCCCCCCccCCccccccCCC-cceeeCCcCCceeeeEEEecCCCcEEEEeccCC---eEEEEeccCCeeEEEeecC
Q 021160 118 FEKNMGLGPSPLSLSPEDLQKREE-PQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCG---HLFIWKKKGGKLVRLMVGD 193 (316)
Q Consensus 118 wd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg---~v~~wd~~~~~~~~~~~~~ 193 (316)
||+.++ +. ...+..+... ..+++| +|++++++++..++ .|++||+.+++.+..+..+
T Consensus 67 ~d~~~~----------------~~~~~~~~~~~~~--~~~~~~-s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~ 127 (331)
T 3u4y_A 67 IETQLE----------------PPKVVAIQEGQSS--MADVDI-TPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP 127 (331)
T ss_dssp EECSSS----------------SCEEEEEEECSSC--CCCEEE-CTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC
T ss_pred EECCCC----------------ceeEEecccCCCC--ccceEE-CCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC
Confidence 999887 44 5555555443 444898 99999999665553 8999999999988887654
Q ss_pred ccceEEEEEcCCCCeEE-EEeCCCc-EEEecCCCCCCC-----CCCCCcccceeeeecCCCCc-eeEEecCCCeEEEEEe
Q 021160 194 RHVVNQLEPHPHIPMFA-TCGIEKT-VKLWAPMPTDFP-----PLPDNAEKIMKANKQGREDH-SRITLTPDVIMHVLRL 265 (316)
Q Consensus 194 ~~~v~~~~~~p~~~~l~-s~~~d~~-i~iwd~~~~~~~-----~~~~~~~~~~~~~~~~~~~~-~~~s~~~d~~~~~w~~ 265 (316)
..+..++|+|++++++ +...++. |.+|++...... ...........+ .++++++ ++++...++.+.+|++
T Consensus 128 -~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~spdg~~l~v~~~~~~~v~v~d~ 205 (331)
T 3u4y_A 128 -YDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNI-TFTPDGNFAFVANLIGNSIGILET 205 (331)
T ss_dssp -TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEE-EECTTSSEEEEEETTTTEEEEEEC
T ss_pred -CCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccce-EECCCCCEEEEEeCCCCeEEEEEC
Confidence 4568999999998654 5456688 999998753311 111112223333 4778887 5566677899999999
Q ss_pred cccCc---cee---------EEeeccccccc-ccCCCCeEEEEeccCCCC
Q 021160 266 QRRQT---LAY---------RERRYNAADFE-SDEEEGETYLLGFSDSDA 302 (316)
Q Consensus 266 ~~~~~---~~~---------~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~ 302 (316)
.+++. ... ..+.|++..+. ....++.|++++...+..
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 206 QNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTL 255 (331)
T ss_dssp SSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEE
T ss_pred CCCcccceeeeccCCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCce
Confidence 87655 221 14566666443 344566688888766543
No 152
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.78 E-value=1.2e-16 Score=133.59 Aligned_cols=230 Identities=10% Similarity=0.074 Sum_probs=145.8
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEe-cCCcEEEEeCcC-CcccCCCCCCCCc
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGG-SDEYARVYDIRK-CHWYSPISSDTPV 79 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~-~dg~v~~wd~~~-~~~~~~~~~~~~~ 79 (316)
.+.|++||+.+.+...+.... .|...+..++|+|++ ++|++++ .++.|.+|++.. +... .+
T Consensus 62 ~~~v~~~~~~~g~~~~~~~~~---------~~~~~p~~~a~spdg-~~l~~~~~~~~~v~v~~~~~~g~~~-------~~ 124 (347)
T 3hfq_A 62 EGGIAAWQIDGQTAHKLNTVV---------APGTPPAYVAVDEAR-QLVYSANYHKGTAEVMKIAADGALT-------LT 124 (347)
T ss_dssp EEEEEEEEEETTEEEEEEEEE---------EESCCCSEEEEETTT-TEEEEEETTTTEEEEEEECTTSCEE-------EE
T ss_pred CceEEEEEecCCcEEEeeeee---------cCCCCCEEEEECCCC-CEEEEEeCCCCEEEEEEeCCCCCee-------ec
Confidence 478999999765543322211 134567899999999 7777766 789999999963 2210 01
Q ss_pred eecccccc---cCCCcccEEEEEEccCCCeEEEe-cCCcEEEEEcC-CCCCCCCccCCccccccCCCc--ceeeCCcCCc
Q 021160 80 DTFCPRHL---IGKNNIHITGLAYSNTSELLISY-NDELVYLFEKN-MGLGPSPLSLSPEDLQKREEP--QVYSGHRNSQ 152 (316)
Q Consensus 80 ~~~~~~~~---~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 152 (316)
..+..... ...+...+.+++|+|+|+++++. .++.|.+|++. .+ ... ..+..... .
T Consensus 125 ~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g----------------~~~~~~~~~~~~g-~ 187 (347)
T 3hfq_A 125 DTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAG----------------QLSEQSVLTMEAG-F 187 (347)
T ss_dssp EEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTS----------------CEEEEEEEECCTT-C
T ss_pred ceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCC----------------cEEEeeeEEcCCC-C
Confidence 10000000 01123458899999999966665 58899999997 33 111 11222221 2
Q ss_pred eeeeEEEecCCCcEEEE-eccCCeEEEEeccC--Cee--EEEeecCc------cceEEEEEcCCCCeE-EEEeCCCcEEE
Q 021160 153 TVKGVNFFGPNDEYVMS-GSDCGHLFIWKKKG--GKL--VRLMVGDR------HVVNQLEPHPHIPMF-ATCGIEKTVKL 220 (316)
Q Consensus 153 ~i~~~~~~~~~~~~l~~-~~~dg~v~~wd~~~--~~~--~~~~~~~~------~~v~~~~~~p~~~~l-~s~~~d~~i~i 220 (316)
.+..++| +|+|+++++ ...++.+.+|++.. ++. +..+.... ..+..++|+|++++| ++...++.|.+
T Consensus 188 ~p~~~~~-spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v 266 (347)
T 3hfq_A 188 GPRHLVF-SPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAV 266 (347)
T ss_dssp CEEEEEE-CTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEE
T ss_pred CCceEEE-CCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEE
Confidence 3778999 999996655 56789999999874 553 22333222 358889999999986 56667899999
Q ss_pred ecCCCC-C---CCCCCCCcccceeeeecCCCCceeEEec-CCCeEEEEEecc
Q 021160 221 WAPMPT-D---FPPLPDNAEKIMKANKQGREDHSRITLT-PDVIMHVLRLQR 267 (316)
Q Consensus 221 wd~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~s~~-~d~~~~~w~~~~ 267 (316)
|++... . +..+..+...+..++ +++++++++.+. .++.+.+|++..
T Consensus 267 ~~~~~~g~~~~~~~~~~~~~~~~~~~-~spdg~~l~v~~~~~~~v~v~~~d~ 317 (347)
T 3hfq_A 267 FAVTADGHLTLIQQISTEGDFPRDFD-LDPTEAFVVVVNQNTDNATLYARDL 317 (347)
T ss_dssp EEECGGGCEEEEEEEECSSSCCCEEE-ECTTSSEEEEEETTTTEEEEEEECT
T ss_pred EEECCCCcEEEeEEEecCCCCcCeEE-ECCCCCEEEEEEcCCCcEEEEEEeC
Confidence 998632 2 222222333344444 788888766655 459999997653
No 153
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.78 E-value=5.9e-18 Score=151.36 Aligned_cols=211 Identities=9% Similarity=-0.012 Sum_probs=148.8
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCc-cceEEEEECCCCCcEEEEEec---CCcEEEEeCcC--CcccCCCCC
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNS-IRLNAIVIDPRNPNYFAVGGS---DEYARVYDIRK--CHWYSPISS 75 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~-~~v~~~~~~~~~~~~l~~g~~---dg~v~~wd~~~--~~~~~~~~~ 75 (316)
+|.++||++...+..++. .|. ..+.+++|+|+ +++++++. +...++|.+.. ..
T Consensus 43 ~g~~~lw~~~~g~~~~lt------------~~~~~~~~~~~~spd--~~l~~~~~~~g~~~~~l~~~~~~~~g------- 101 (582)
T 3o4h_A 43 EGSVNAYLYDGGETVKLN------------REPINSVLDPHYGVG--RVILVRDVSKGAEQHALFKVNTSRPG------- 101 (582)
T ss_dssp TTEEEEEEEETTEEEECC------------SSCCSEECEECTTCS--EEEEEEECSTTSCCEEEEEEETTSTT-------
T ss_pred CCceeEEEEcCCCcEeee------------cccccccccccCCCC--eEEEEeccCCCCcceEEEEEeccCCC-------
Confidence 578999998654432221 133 57899999997 57776664 55667776654 21
Q ss_pred CCCceecccccccCCCcccEEEEEEccCCC--eEEEecCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCce
Q 021160 76 DTPVDTFCPRHLIGKNNIHITGLAYSNTSE--LLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQT 153 (316)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (316)
....+... ......+|+|+|+ .++++.++.+.+||+.++ +..+ +..+.
T Consensus 102 -------~~~~l~~~--~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g----------------~~~~-l~~~~---- 151 (582)
T 3o4h_A 102 -------EEQRLEAV--KPMRILSGVDTGEAVVFTGATEDRVALYALDGG----------------GLRE-LARLP---- 151 (582)
T ss_dssp -------CCEECTTS--CSBEEEEEEECSSCEEEEEECSSCEEEEEEETT----------------EEEE-EEEES----
T ss_pred -------ccccccCC--CCceeeeeCCCCCeEEEEecCCCCceEEEccCC----------------cEEE-eecCC----
Confidence 00111111 1233568888885 455566666679999876 3333 33222
Q ss_pred eeeEEEecCCCcEEEEeccC----CeEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCC--cEEEecCCCCC
Q 021160 154 VKGVNFFGPNDEYVMSGSDC----GHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEK--TVKLWAPMPTD 227 (316)
Q Consensus 154 i~~~~~~~~~~~~l~~~~~d----g~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~--~i~iwd~~~~~ 227 (316)
..+++| +|+|++|++++.+ +.|++||+.+++.. .+..|...+..++|+|||+.|+++..++ .|++||+.+++
T Consensus 152 ~~~~~~-spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~ 229 (582)
T 3o4h_A 152 GFGFVS-DIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGS 229 (582)
T ss_dssp SCEEEE-EEETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCC
T ss_pred CceEEE-CCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCc
Confidence 167888 9999999988877 78999999988854 6677888899999999999999888888 89999999887
Q ss_pred CCCCCCCcccceeee-------ecCCCCceeEEecCCCeEEEEEe
Q 021160 228 FPPLPDNAEKIMKAN-------KQGREDHSRITLTPDVIMHVLRL 265 (316)
Q Consensus 228 ~~~~~~~~~~~~~~~-------~~~~~~~~~~s~~~d~~~~~w~~ 265 (316)
...+..+...+.... .|++++.++++.+.++.+++|++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 230 VEDLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp EEECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred EEEccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 445555554443322 17888888899999999999998
No 154
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.77 E-value=1.4e-17 Score=148.84 Aligned_cols=222 Identities=10% Similarity=0.002 Sum_probs=153.2
Q ss_pred ccceEEEEECCCCCcEEEEEec-CCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEec-
Q 021160 34 SIRLNAIVIDPRNPNYFAVGGS-DEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYN- 111 (316)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~~g~~-dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~- 111 (316)
..+|.+++|+|+| +.||.++. ||+++||++.+++ ...+...+...+..++|+|+ ++++++.
T Consensus 21 ~~~~~~~~~~~DG-~~la~~s~~~g~~~lw~~~~g~---------------~~~lt~~~~~~~~~~~~spd-~~l~~~~~ 83 (582)
T 3o4h_A 21 AVEKYSLQGVVDG-DKLLVVGFSEGSVNAYLYDGGE---------------TVKLNREPINSVLDPHYGVG-RVILVRDV 83 (582)
T ss_dssp HSCEEEEEEEETT-TEEEEEEEETTEEEEEEEETTE---------------EEECCSSCCSEECEECTTCS-EEEEEEEC
T ss_pred ccchheeecCCCC-CeEEEEEccCCceeEEEEcCCC---------------cEeeecccccccccccCCCC-eEEEEecc
Confidence 4579999999999 78888776 9999999987664 22232333367899999999 7666542
Q ss_pred ---CCcEEEEEcCC--CCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCc--EEEEeccCCeEEEEeccCC
Q 021160 112 ---DELVYLFEKNM--GLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDE--YVMSGSDCGHLFIWKKKGG 184 (316)
Q Consensus 112 ---d~~i~iwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~l~~~~~dg~v~~wd~~~~ 184 (316)
+....+|.+.. .. .. ..+.... . +...+| +|+++ .+++++.++ +.+||+.++
T Consensus 84 ~~g~~~~~l~~~~~~~~g---------------~~-~~l~~~~-~--~~~~~~-s~dg~~~~~~s~~~~~-~~l~d~~~g 142 (582)
T 3o4h_A 84 SKGAEQHALFKVNTSRPG---------------EE-QRLEAVK-P--MRILSG-VDTGEAVVFTGATEDR-VALYALDGG 142 (582)
T ss_dssp STTSCCEEEEEEETTSTT---------------CC-EECTTSC-S--BEEEEE-EECSSCEEEEEECSSC-EEEEEEETT
T ss_pred CCCCcceEEEEEeccCCC---------------cc-ccccCCC-C--ceeeee-CCCCCeEEEEecCCCC-ceEEEccCC
Confidence 45566665543 20 11 1222222 1 334566 66665 444455444 559999998
Q ss_pred eeEEEeecCccceEEEEEcCCCCeEEEEeCC----CcEEEecCCCCCCCCCCCCcccceeeeecCCCCceeEEecCCC--
Q 021160 185 KLVRLMVGDRHVVNQLEPHPHIPMFATCGIE----KTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLTPDV-- 258 (316)
Q Consensus 185 ~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~-- 258 (316)
+.......+. .+++|+|+|+.|++++.+ +.|++||+.+++...+..+...+.... |++|++.+++...++
T Consensus 143 ~~~~l~~~~~---~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~-~SpDG~~l~~~~~~~~~ 218 (582)
T 3o4h_A 143 GLRELARLPG---FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSAS-ISPGMKVTAGLETAREA 218 (582)
T ss_dssp EEEEEEEESS---CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSSCEEEEEE-ECTTSCEEEEEECSSCE
T ss_pred cEEEeecCCC---ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCCCccccce-ECCCCCEEEEccCCCee
Confidence 8665554332 789999999999988777 789999999988777777776665555 899999999888888
Q ss_pred eEEEEEecccCcceeE---------E--------eecccccccccCCCCeEEEEec
Q 021160 259 IMHVLRLQRRQTLAYR---------E--------RRYNAADFESDEEEGETYLLGF 297 (316)
Q Consensus 259 ~~~~w~~~~~~~~~~~---------~--------~~~~~~~~~~~~~~~~v~~~~~ 297 (316)
.|++||+.+++..... . ++|++..+.+...++++.+|.+
T Consensus 219 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 219 RLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp EEEEECTTTCCEEECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred EEEEEcCCCCcEEEccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 8999998776443111 2 6666655555666677777776
No 155
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.77 E-value=1.6e-16 Score=132.80 Aligned_cols=235 Identities=7% Similarity=0.042 Sum_probs=145.8
Q ss_pred ccceEEEEECCCCCcEEEEEec--CCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEE-e
Q 021160 34 SIRLNAIVIDPRNPNYFAVGGS--DEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLIS-Y 110 (316)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~~g~~--dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s-~ 110 (316)
...+..++|+|++ ++++++.. ++.|.+|++.+++.. ....+ ..+...+..++|+|+|++|++ +
T Consensus 39 ~~~p~~~a~spdg-~l~~~~~~~~~~~v~~~~~~~g~~~------------~~~~~-~~~~~~p~~~a~spdg~~l~~~~ 104 (347)
T 3hfq_A 39 TQNPTYLALSAKD-CLYSVDKEDDEGGIAAWQIDGQTAH------------KLNTV-VAPGTPPAYVAVDEARQLVYSAN 104 (347)
T ss_dssp CSCCCCEEECTTC-EEEEEEEETTEEEEEEEEEETTEEE------------EEEEE-EEESCCCSEEEEETTTTEEEEEE
T ss_pred cCCcceEEEccCC-eEEEEEecCCCceEEEEEecCCcEE------------Eeeee-ecCCCCCEEEEECCCCCEEEEEe
Confidence 3467789999999 64444432 689999999766521 11111 234556788999999996665 4
Q ss_pred -cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCc-------CCceeeeEEEecCCCcEEEEeccCCeEEEEecc
Q 021160 111 -NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHR-------NSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKK 182 (316)
Q Consensus 111 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~ 182 (316)
.++.|.+|++..... ...+..+.... ....+.+++| +|+++++++...++.|++|++.
T Consensus 105 ~~~~~v~v~~~~~~g~-------------~~~~~~~~~~~~~p~~~~~~~~~~~~~~-spdg~l~v~~~~~~~v~~~~~~ 170 (347)
T 3hfq_A 105 YHKGTAEVMKIAADGA-------------LTLTDTVQHSGHGPRPEQDGSHIHYTDL-TPDNRLAVIDLGSDKVYVYNVS 170 (347)
T ss_dssp TTTTEEEEEEECTTSC-------------EEEEEEEECCCCCSSTTCSSCCEEEEEE-CTTSCEEEEETTTTEEEEEEEC
T ss_pred CCCCEEEEEEeCCCCC-------------eeecceeecCCCCCCccccCCCceEEEE-CCCCcEEEEeCCCCEEEEEEEC
Confidence 589999999963200 01112221110 1123778999 9999977777778999999998
Q ss_pred -CCeeEE--EeecC-ccceEEEEEcCCCCeEEE-EeCCCcEEEecCCC--CCCC------CCCCC---cccceeeeecCC
Q 021160 183 -GGKLVR--LMVGD-RHVVNQLEPHPHIPMFAT-CGIEKTVKLWAPMP--TDFP------PLPDN---AEKIMKANKQGR 246 (316)
Q Consensus 183 -~~~~~~--~~~~~-~~~v~~~~~~p~~~~l~s-~~~d~~i~iwd~~~--~~~~------~~~~~---~~~~~~~~~~~~ 246 (316)
+++... .+..+ ...+..++|+|++++++. ...++.|.+|++.. +++. ..... ...+.. ..+++
T Consensus 171 ~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-i~~sp 249 (347)
T 3hfq_A 171 DAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAA-IRLSH 249 (347)
T ss_dssp TTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEE-EEECT
T ss_pred CCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCccee-EEECC
Confidence 555332 22222 236788999999996554 56788999999874 3211 11110 012323 34788
Q ss_pred CCcee-EEecCCCeEEEEEecccCc-------------ceeEEeeccccccccc-CCCCeEEEEec
Q 021160 247 EDHSR-ITLTPDVIMHVLRLQRRQT-------------LAYRERRYNAADFESD-EEEGETYLLGF 297 (316)
Q Consensus 247 ~~~~~-~s~~~d~~~~~w~~~~~~~-------------~~~~~~~~~~~~~~~~-~~~~~v~~~~~ 297 (316)
+++++ ++...++.+.+|++..... +....++|++..+... .+++.+.+|+.
T Consensus 250 dG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~ 315 (347)
T 3hfq_A 250 DGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYAR 315 (347)
T ss_dssp TSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred CCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEE
Confidence 88866 6677789999999863211 1112455666555443 34466777754
No 156
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.77 E-value=4.4e-17 Score=135.93 Aligned_cols=225 Identities=8% Similarity=0.036 Sum_probs=149.9
Q ss_pred EEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeE-EEe-cCCcEE
Q 021160 39 AIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELL-ISY-NDELVY 116 (316)
Q Consensus 39 ~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~s~-~d~~i~ 116 (316)
.+++++++ .++++++.++.|.+||+.+++.. ..+..+....+..++|+|+++.+ ++. .++.|.
T Consensus 4 g~~~~~~~-~~~v~~~~~~~v~~~d~~~~~~~--------------~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~ 68 (349)
T 1jmx_B 4 GPALKAGH-EYMIVTNYPNNLHVVDVASDTVY--------------KSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIY 68 (349)
T ss_dssp CCCCCTTC-EEEEEEETTTEEEEEETTTTEEE--------------EEEECSSCCSSCEEEECTTSSEEEEEETTTTEEE
T ss_pred cccccCCC-EEEEEeCCCCeEEEEECCCCcEE--------------EEEecCCCCCCceeEECCCCCEEEEEeCCCCcEE
Confidence 45677877 89999999999999999988632 12211111246789999999844 454 589999
Q ss_pred EEEcCCCCCCCCccCCccccccCCCcceeeCCcC----CceeeeEEEecCCCcEEEEeccC------------CeEEEEe
Q 021160 117 LFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRN----SQTVKGVNFFGPNDEYVMSGSDC------------GHLFIWK 180 (316)
Q Consensus 117 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~i~~~~~~~~~~~~l~~~~~d------------g~v~~wd 180 (316)
+||+.++ +....+..... ...+..++| +|+|+++++++.+ +.|.+||
T Consensus 69 ~~d~~t~----------------~~~~~~~~~~~~~~~~~~~~~~~~-spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d 131 (349)
T 1jmx_B 69 GIDLDTC----------------KNTFHANLSSVPGEVGRSMYSFAI-SPDGKEVYATVNPTQRLNDHYVVKPPRLEVFS 131 (349)
T ss_dssp EEETTTT----------------EEEEEEESCCSTTEEEECSSCEEE-CTTSSEEEEEEEEEEECSSCEEECCCEEEEEE
T ss_pred EEeCCCC----------------cEEEEEEcccccccccccccceEE-CCCCCEEEEEcccccccccccccCCCeEEEEE
Confidence 9999877 44444442211 122678898 9999999998865 8999999
Q ss_pred ccCCee---EEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC-CCCCCCCc---------------------
Q 021160 181 KKGGKL---VRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD-FPPLPDNA--------------------- 235 (316)
Q Consensus 181 ~~~~~~---~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~--------------------- 235 (316)
+.+++. +..+.. ...+.+++|+|+++ ++.++ +.|++||+.+++ ...+....
T Consensus 132 ~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (349)
T 1jmx_B 132 TADGLEAKPVRTFPM-PRQVYLMRAADDGS-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPR 207 (349)
T ss_dssp GGGGGGBCCSEEEEC-CSSCCCEEECTTSC-EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTT
T ss_pred CCCccccceeeeccC-CCcccceeECCCCc-EEEcc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcc
Confidence 988543 334443 34688899999999 55554 349999998765 22221110
Q ss_pred c---c-------------------------------------------ceeeeecCC-CCceeEEecCCCeEEEEEeccc
Q 021160 236 E---K-------------------------------------------IMKANKQGR-EDHSRITLTPDVIMHVLRLQRR 268 (316)
Q Consensus 236 ~---~-------------------------------------------~~~~~~~~~-~~~~~~s~~~d~~~~~w~~~~~ 268 (316)
. . ......+++ ++++++.+ ++.+.+||+.++
T Consensus 208 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~ 285 (349)
T 1jmx_B 208 HEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQR 285 (349)
T ss_dssp CEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTT
T ss_pred eeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccC
Confidence 0 0 001112346 77777666 889999998765
Q ss_pred Cccee---------EEeecccccccccCCCCeEEEEeccCCC
Q 021160 269 QTLAY---------RERRYNAADFESDEEEGETYLLGFSDSD 301 (316)
Q Consensus 269 ~~~~~---------~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 301 (316)
+.... ..+.+++..+.....++.|.+||...++
T Consensus 286 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~ 327 (349)
T 1jmx_B 286 KLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLE 327 (349)
T ss_dssp EEEEEEECSSCCCEEEECSSSSCEEEESBSSEEEEEETTTTE
T ss_pred eEEEEEcCCCCccceEECCCCCEEEEecCCCeEEEEeccccc
Confidence 43221 2466666666666667889999987654
No 157
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.77 E-value=5.9e-17 Score=148.81 Aligned_cols=236 Identities=8% Similarity=0.057 Sum_probs=149.0
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecC---------CcEEEEeCcCCcccCC
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSD---------EYARVYDIRKCHWYSP 72 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~d---------g~v~~wd~~~~~~~~~ 72 (316)
+|.|++||+.+.+...++..+... .+......++|+|+| ++|+.++.+ +.+.+||+.++++.
T Consensus 35 ~~~i~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~Spdg-~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-- 105 (740)
T 4a5s_A 35 ENNILVFNAEYGNSSVFLENSTFD------EFGHSINDYSISPDG-QFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-- 105 (740)
T ss_dssp TTEEEEEETTTCCEEEEECTTTTT------TCCSCCCEEEECTTS-SEEEEEEEEEECSSSCEEEEEEEEETTTTEEC--
T ss_pred CCcEEEEECCCCceEEEEechhhh------hhcccccceEECCCC-CEEEEEECCeeeEEEccceEEEEEECCCCcEE--
Confidence 478999999988876555443222 122234568999999 788888765 56779999988632
Q ss_pred CCCCCCceecccccccCCCcccEEEEEEccCCCeEEEecCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCC-
Q 021160 73 ISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNS- 151 (316)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 151 (316)
.+ ..|...+..++|||||+.|+...++.|++|++.++... .+.. .......+.++...
T Consensus 106 -------------~l-~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~~---~lt~----~g~~~~~~~g~~~~v 164 (740)
T 4a5s_A 106 -------------TE-ERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSY---RITW----TGKEDIIYNGITDWV 164 (740)
T ss_dssp -------------CS-SCCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSCCE---ECCS----CCBTTTEEESBCCHH
T ss_pred -------------Ec-ccCCCcceeeEECCCCCEEEEEECCeEEEEECCCCceE---EEcC----CCCccceecCccccc
Confidence 12 44567899999999999998888999999999876200 0000 00001112222210
Q ss_pred ------ceeeeEEEecCCCcEEEEeccCC------------------------------------eEEEEeccC---Ce-
Q 021160 152 ------QTVKGVNFFGPNDEYVMSGSDCG------------------------------------HLFIWKKKG---GK- 185 (316)
Q Consensus 152 ------~~i~~~~~~~~~~~~l~~~~~dg------------------------------------~v~~wd~~~---~~- 185 (316)
.....+.| +|||++|+..+.|. .|++||+.+ ++
T Consensus 165 ~~ee~~~~~~~~~w-SpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~ 243 (740)
T 4a5s_A 165 YEEEVFSAYSALWW-SPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTN 243 (740)
T ss_dssp HHHHTSSSSBCEEE-CTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSC
T ss_pred ccchhcCCCcceEE-CCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCc
Confidence 01235788 99999999875321 588899988 73
Q ss_pred -eEEEee------cCccceEEEEEcCCCCeEEEEe----CCCcEEEecCCCCC-------CCCC--CCCcccce----ee
Q 021160 186 -LVRLMV------GDRHVVNQLEPHPHIPMFATCG----IEKTVKLWAPMPTD-------FPPL--PDNAEKIM----KA 241 (316)
Q Consensus 186 -~~~~~~------~~~~~v~~~~~~p~~~~l~s~~----~d~~i~iwd~~~~~-------~~~~--~~~~~~~~----~~ 241 (316)
....+. +|...+..++|+|+++.++... .+..|++||+.+++ ...+ ..+...+- ..
T Consensus 244 ~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~ 323 (740)
T 4a5s_A 244 ATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSE 323 (740)
T ss_dssp CCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCC
T ss_pred ceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCC
Confidence 223333 3777899999999999765543 23379999998775 2222 22332221 12
Q ss_pred eecCCCCceeE-Eec-CC--CeEEEEEeccc
Q 021160 242 NKQGREDHSRI-TLT-PD--VIMHVLRLQRR 268 (316)
Q Consensus 242 ~~~~~~~~~~~-s~~-~d--~~~~~w~~~~~ 268 (316)
..|+++++.++ ..+ .+ ..|.+|++..+
T Consensus 324 p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~ 354 (740)
T 4a5s_A 324 PHFTLDGNSFYKIISNEEGYRHICYFQIDKK 354 (740)
T ss_dssp CEECTTSSEEEEEEECTTSCEEEEEEETTCS
T ss_pred ceEcCCCCEEEEEEEcCCCceEEEEEECCCC
Confidence 33788888765 554 34 45666666544
No 158
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.76 E-value=1.9e-16 Score=131.32 Aligned_cols=218 Identities=6% Similarity=0.015 Sum_probs=148.2
Q ss_pred cEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcc-cEEEEEEccCCCeE-EEe-cCCcEEEEEcCCCC
Q 021160 48 NYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNI-HITGLAYSNTSELL-ISY-NDELVYLFEKNMGL 124 (316)
Q Consensus 48 ~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l-~s~-~d~~i~iwd~~~~~ 124 (316)
.++++++.++.|.+||+.+++.. ..+..++.. .+..++|+|+++.+ +++ .++.|.+||+.++
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~--------------~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~- 66 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVD--------------KVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTG- 66 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEE--------------EEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTC-
T ss_pred cEEEEcCCCCeEEEEECCCCcEE--------------EEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCC-
Confidence 57899999999999999988632 222122221 36789999999744 454 5789999999877
Q ss_pred CCCCccCCccccccCCCcceeeCCc-C--CceeeeEEEecCCCcEEEEec------------cCCeEEEEeccCCeeEEE
Q 021160 125 GPSPLSLSPEDLQKREEPQVYSGHR-N--SQTVKGVNFFGPNDEYVMSGS------------DCGHLFIWKKKGGKLVRL 189 (316)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~i~~~~~~~~~~~~l~~~~------------~dg~v~~wd~~~~~~~~~ 189 (316)
+....+.... . ...+.+++| +|+++++++++ .++.|.+||+.+++.+..
T Consensus 67 ---------------~~~~~~~~~~~~~~~~~~~~~~~-s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~ 130 (337)
T 1pby_B 67 ---------------ETLGRIDLSTPEERVKSLFGAAL-SPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKA 130 (337)
T ss_dssp ---------------CEEEEEECCBTTEEEECTTCEEE-CTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEE
T ss_pred ---------------CeEeeEEcCCcccccccccceEE-CCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEE
Confidence 4544444221 0 012678898 99999998886 579999999999998877
Q ss_pred eecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCCCC-CCCCCc--cc-----------------------------
Q 021160 190 MVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFP-PLPDNA--EK----------------------------- 237 (316)
Q Consensus 190 ~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~~~-~~~~~~--~~----------------------------- 237 (316)
+.. ...+..++|+|++++|+++ ++.|++||+.+++.. .+..+. ..
T Consensus 131 ~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~ 207 (337)
T 1pby_B 131 FEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARK 207 (337)
T ss_dssp EEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBT
T ss_pred EeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeecccc
Confidence 764 3467889999999988777 689999998865411 110000 00
Q ss_pred ---------------c-------------------eeeeecCCCCceeEEecCCCeEEEEEecccCccee---------E
Q 021160 238 ---------------I-------------------MKANKQGREDHSRITLTPDVIMHVLRLQRRQTLAY---------R 274 (316)
Q Consensus 238 ---------------~-------------------~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~~~~~---------~ 274 (316)
+ .....+++++++++.+ ++.+.+||+.+++.... .
T Consensus 208 ~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~ 285 (337)
T 1pby_B 208 DIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLPHSYYSV 285 (337)
T ss_dssp TSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEE
T ss_pred ccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCCCceeeE
Confidence 0 0012356667666666 68899999876533221 2
Q ss_pred EeecccccccccCCCCeEEEEeccCCC
Q 021160 275 ERRYNAADFESDEEEGETYLLGFSDSD 301 (316)
Q Consensus 275 ~~~~~~~~~~~~~~~~~v~~~~~~~~~ 301 (316)
.+.|++..+.....++.|.+|+...++
T Consensus 286 ~~s~dg~~l~~~~~~~~i~v~d~~~~~ 312 (337)
T 1pby_B 286 NVSTDGSTVWLGGALGDLAAYDAETLE 312 (337)
T ss_dssp EECTTSCEEEEESBSSEEEEEETTTCC
T ss_pred EECCCCCEEEEEcCCCcEEEEECcCCc
Confidence 456666656555667788888887654
No 159
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.74 E-value=6.2e-15 Score=123.80 Aligned_cols=254 Identities=7% Similarity=-0.010 Sum_probs=152.1
Q ss_pred eeeEEEEeeCC--CcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecC----CcEEEEeCcC--CcccCCCC
Q 021160 3 LFNMLFDLRSD--SATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSD----EYARVYDIRK--CHWYSPIS 74 (316)
Q Consensus 3 g~v~vwd~~~~--~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~d----g~v~~wd~~~--~~~~~~~~ 74 (316)
+.|.+|++... +....... |...+..++|+|++ ++|++++.+ +.|.+|++.. +++.
T Consensus 27 ~~i~~~~~d~~~g~~~~~~~~-----------~~~~p~~l~~spdg-~~l~~~~~~~~~~~~v~~~~~~~~~g~~~---- 90 (361)
T 3scy_A 27 KGIYTFRFNEETGESLPLSDA-----------EVANPSYLIPSADG-KFVYSVNEFSKDQAAVSAFAFDKEKGTLH---- 90 (361)
T ss_dssp CEEEEEEEETTTCCEEEEEEE-----------ECSCCCSEEECTTS-SEEEEEECCSSTTCEEEEEEEETTTTEEE----
T ss_pred CCEEEEEEeCCCCCEEEeecc-----------cCCCCceEEECCCC-CEEEEEEccCCCCCcEEEEEEeCCCCcEE----
Confidence 46888888643 33222222 13456789999999 788887765 8999999875 3311
Q ss_pred CCCCceecccccccCCCcccEEEEEEccCCCeEEE-e-cCCcEEEEEcCCCCCCCCccCCccccccCCCccee--eCC--
Q 021160 75 SDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLIS-Y-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVY--SGH-- 148 (316)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s-~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-- 148 (316)
..... ..+......+++ ++++|++ . .++.|.+|++....... .....+ .+.
T Consensus 91 --------~~~~~-~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~------------~~~~~~~~~g~~~ 147 (361)
T 3scy_A 91 --------LLNTQ-KTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALL------------PASDVIEFKGSGP 147 (361)
T ss_dssp --------EEEEE-ECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBC------------SCSEEEECCCCCS
T ss_pred --------EeeEe-ccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCc------------ccceeEEccCCCC
Confidence 11111 223445667777 7775555 4 58999999997541000 000000 110
Q ss_pred ----cCCceeeeEEEecCCCcEEEEec-cCCeEEEEeccCCe-------eE-----EE-eecCccceEEEEEcCCCCeEE
Q 021160 149 ----RNSQTVKGVNFFGPNDEYVMSGS-DCGHLFIWKKKGGK-------LV-----RL-MVGDRHVVNQLEPHPHIPMFA 210 (316)
Q Consensus 149 ----~~~~~i~~~~~~~~~~~~l~~~~-~dg~v~~wd~~~~~-------~~-----~~-~~~~~~~v~~~~~~p~~~~l~ 210 (316)
.....+.+++| +|+++++++++ .++.|++|++.... +. .. ...+...+..++|+|++++++
T Consensus 148 ~~~~~~~~~~~~~~~-spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~ 226 (361)
T 3scy_A 148 DKERQTMPHLHCVRI-TPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAY 226 (361)
T ss_dssp CTTTCSSCCEEEEEE-CTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEE
T ss_pred CccccCCCcceEEEE-CCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEE
Confidence 00112578998 99999665554 58899999887533 21 11 122345678999999999876
Q ss_pred EEe-CCCcEEEecCCCCCC------CCCCCCcccceeeeecCCCCceeEEec-C-CCeEEEEEec--ccCc---------
Q 021160 211 TCG-IEKTVKLWAPMPTDF------PPLPDNAEKIMKANKQGREDHSRITLT-P-DVIMHVLRLQ--RRQT--------- 270 (316)
Q Consensus 211 s~~-~d~~i~iwd~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~s~~-~-d~~~~~w~~~--~~~~--------- 270 (316)
.++ .++.|.+|++.++.+ .....+......+ .+++++++++... . ++.+.+|++. ++..
T Consensus 227 v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i-~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g 305 (361)
T 3scy_A 227 LINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDI-HLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTG 305 (361)
T ss_dssp EEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEE-EECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECS
T ss_pred EEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccE-EECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCC
Confidence 666 689999999986542 1122222223333 4888888775544 4 5899999996 2221
Q ss_pred --ceeEEeeccccccccc-CCCCeEEEEec
Q 021160 271 --LAYRERRYNAADFESD-EEEGETYLLGF 297 (316)
Q Consensus 271 --~~~~~~~~~~~~~~~~-~~~~~v~~~~~ 297 (316)
+....++|++..+... ..++.+.+|.+
T Consensus 306 ~~~~~~~~spdg~~l~~~~~~~~~v~v~~~ 335 (361)
T 3scy_A 306 IHPRNFIITPNGKYLLVACRDTNVIQIFER 335 (361)
T ss_dssp SCCCEEEECTTSCEEEEEETTTTEEEEEEE
T ss_pred CCCceEEECCCCCEEEEEECCCCCEEEEEE
Confidence 1112466666655544 35566777544
No 160
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.73 E-value=1.2e-16 Score=146.49 Aligned_cols=225 Identities=5% Similarity=-0.049 Sum_probs=142.5
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
++.|++||+.+.+....... ...+..++|+|+| +.|+.+. ++.|++|++.+++.........
T Consensus 89 ~~~i~~~d~~~g~~~~~~~l------------~~~~~~~~~SPDG-~~la~~~-~~~i~~~~~~~g~~~~l~~~~~---- 150 (719)
T 1z68_A 89 TATYYIYDLSNGEFVRGNEL------------PRPIQYLCWSPVG-SKLAYVY-QNNIYLKQRPGDPPFQITFNGR---- 150 (719)
T ss_dssp EEEEEEEETTTTEECCSSCC------------CSSBCCEEECSST-TCEEEEE-TTEEEEESSTTSCCEECCCCCB----
T ss_pred ceEEEEEECCCCccccceec------------CcccccceECCCC-CEEEEEE-CCeEEEEeCCCCCcEEEecCCC----
Confidence 47899999987654110111 2357889999999 7888775 7899999998876321100000
Q ss_pred cccccccCCCccc---------EEEEEEccCCCeEEEe-cC-C---------------------------------cEEE
Q 021160 82 FCPRHLIGKNNIH---------ITGLAYSNTSELLISY-ND-E---------------------------------LVYL 117 (316)
Q Consensus 82 ~~~~~~~~~~~~~---------i~~~~~~~~~~~l~s~-~d-~---------------------------------~i~i 117 (316)
...+..++... ..+++|+|||+.|+++ .| + .|++
T Consensus 151 --~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~ 228 (719)
T 1z68_A 151 --ENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFI 228 (719)
T ss_dssp --TTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEE
T ss_pred --cCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEE
Confidence 00011122221 2489999999988774 33 2 6778
Q ss_pred EEcCCCCCCCCccCCccccccCCCc--------ceeeCCcCCceeeeEEEecCCCcEEEEeccC----CeEEEEe----c
Q 021160 118 FEKNMGLGPSPLSLSPEDLQKREEP--------QVYSGHRNSQTVKGVNFFGPNDEYVMSGSDC----GHLFIWK----K 181 (316)
Q Consensus 118 wd~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d----g~v~~wd----~ 181 (316)
||+.++ +.. ..+.++... +.+++| +|+++++++.... ..|++|| +
T Consensus 229 ~d~~~~----------------~~~~~~~~~~~~~~~~~~~~--~~~~~~-SpD~~~~~~~~~~~~~~~~l~~~d~~~~~ 289 (719)
T 1z68_A 229 IDTTYP----------------AYVGPQEVPVPAMIASSDYY--FSWLTW-VTDERVCLQWLKRVQNVSVLSICDFREDW 289 (719)
T ss_dssp EESSCH----------------HHHCCEECCCCHHHHTSCEE--EEEEEE-SSSSEEEEEEEESSTTEEEEEEEEECSSS
T ss_pred EECCCC----------------CccceeEccCCccCCCCcce--EEEeEE-eCCCeEEEEEeccccCeEEEEEEcccCCC
Confidence 888765 221 223345533 899999 9998877774432 3488999 8
Q ss_pred cCCeeEEEe----ecCccceE-----EEEEcCCCCeEEE--EeCCC--cEEEecCCCCCCCCCCCCcccceeeeecCCCC
Q 021160 182 KGGKLVRLM----VGDRHVVN-----QLEPHPHIPMFAT--CGIEK--TVKLWAPMPTDFPPLPDNAEKIMKANKQGRED 248 (316)
Q Consensus 182 ~~~~~~~~~----~~~~~~v~-----~~~~~p~~~~l~s--~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (316)
.++++...+ ..|...+. .++|+|+++.|+. ...++ .|.+|++.+++...+..+...+.....+ ++
T Consensus 290 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~~~lt~~~~~v~~~~~~--d~ 367 (719)
T 1z68_A 290 QTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENAIQITSGKWEAINIFRV--TQ 367 (719)
T ss_dssp SSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTTCEECSCSSSCEEEEEEE--CS
T ss_pred CCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCceEecccCceEEEEEEEE--eC
Confidence 777765555 36666666 7899999996543 44555 5777888777655565554445555545 55
Q ss_pred ceeE-EecC----CCeEEEEEecc
Q 021160 249 HSRI-TLTP----DVIMHVLRLQR 267 (316)
Q Consensus 249 ~~~~-s~~~----d~~~~~w~~~~ 267 (316)
..++ +... ++..++|.+..
T Consensus 368 ~~i~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 368 DSLFYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp SEEEEEESCGGGCTTCBEEEEEEC
T ss_pred CEEEEEEecCCCCCceEEEEEEeC
Confidence 5444 4444 47888998764
No 161
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.73 E-value=3.8e-16 Score=143.44 Aligned_cols=195 Identities=8% Similarity=0.079 Sum_probs=134.5
Q ss_pred cceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCc-----ccEEEEEEccCCCeEEE
Q 021160 35 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNN-----IHITGLAYSNTSELLIS 109 (316)
Q Consensus 35 ~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~i~~~~~~~~~~~l~s 109 (316)
....+++|+|++ .+++++ |+.|++||+.+++.. . +..+|. .....++|||||+.|+.
T Consensus 17 ~~~~~~~w~~dg-~~~~~~--~~~i~~~~~~~~~~~--------------~-~~~~~~~~~~~~~~~~~~~Spdg~~l~~ 78 (740)
T 4a5s_A 17 LKLYSLRWISDH-EYLYKQ--ENNILVFNAEYGNSS--------------V-FLENSTFDEFGHSINDYSISPDGQFILL 78 (740)
T ss_dssp CCCCCEEECSSS-EEEEEE--TTEEEEEETTTCCEE--------------E-EECTTTTTTCCSCCCEEEECTTSSEEEE
T ss_pred ccccccEECCCC-cEEEEc--CCcEEEEECCCCceE--------------E-EEechhhhhhcccccceEECCCCCEEEE
Confidence 346689999999 788886 899999999988721 1 112222 22345899999998777
Q ss_pred ec-C---------CcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEeccCCeEEEE
Q 021160 110 YN-D---------ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIW 179 (316)
Q Consensus 110 ~~-d---------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~w 179 (316)
+. + +.+.+||+.++ +. ..+..+... +...+| +|+|+.|+.+. ++.|++|
T Consensus 79 ~~~~~~~~r~~~~~~~~~~d~~~~----------------~~-~~l~~~~~~--~~~~~~-SPdG~~la~~~-~~~i~~~ 137 (740)
T 4a5s_A 79 EYNYVKQWRHSYTASYDIYDLNKR----------------QL-ITEERIPNN--TQWVTW-SPVGHKLAYVW-NNDIYVK 137 (740)
T ss_dssp EEEEEECSSSCEEEEEEEEETTTT----------------EE-CCSSCCCTT--EEEEEE-CSSTTCEEEEE-TTEEEEE
T ss_pred EECCeeeEEEccceEEEEEECCCC----------------cE-EEcccCCCc--ceeeEE-CCCCCEEEEEE-CCeEEEE
Confidence 53 3 66789999987 33 335555544 899999 99999999885 6899999
Q ss_pred eccCCeeEEEe-ecCccce-----------------EEEEEcCCCCeEEEEeCCC-------------------------
Q 021160 180 KKKGGKLVRLM-VGDRHVV-----------------NQLEPHPHIPMFATCGIEK------------------------- 216 (316)
Q Consensus 180 d~~~~~~~~~~-~~~~~~v-----------------~~~~~~p~~~~l~s~~~d~------------------------- 216 (316)
++.+++..+.. .++...+ ..+.|||||+.||.++.|.
T Consensus 138 ~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~ 217 (740)
T 4a5s_A 138 IEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVP 217 (740)
T ss_dssp SSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEE
T ss_pred ECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeec
Confidence 99888754422 2222222 3488999999998875332
Q ss_pred -----------cEEEecCCC---C---CCCCCCC------CcccceeeeecCCCCceeEEecC----CCeEEEEEecccC
Q 021160 217 -----------TVKLWAPMP---T---DFPPLPD------NAEKIMKANKQGREDHSRITLTP----DVIMHVLRLQRRQ 269 (316)
Q Consensus 217 -----------~i~iwd~~~---~---~~~~~~~------~~~~~~~~~~~~~~~~~~~s~~~----d~~~~~w~~~~~~ 269 (316)
.|++||+.+ + +...+.. +...+.... |+++++.++.... +..|++||+.+++
T Consensus 218 yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-wspdg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 218 YPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVT-WATQERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp CCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEE-EEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred CCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEE-EeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 478888887 6 3223322 444444444 7888886665432 3579999988765
No 162
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.73 E-value=1e-14 Score=122.51 Aligned_cols=238 Identities=8% Similarity=0.048 Sum_probs=140.6
Q ss_pred eeeEEEEeeCC--CcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEe-cCCcEEEEeCcCCcccCCCCCCCCc
Q 021160 3 LFNMLFDLRSD--SATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGG-SDEYARVYDIRKCHWYSPISSDTPV 79 (316)
Q Consensus 3 g~v~vwd~~~~--~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~-~dg~v~~wd~~~~~~~~~~~~~~~~ 79 (316)
|.|.+|++... +...+.... .+......+++ ++ +++++++ .++.|.+|++.......... ..
T Consensus 75 ~~v~~~~~~~~~g~~~~~~~~~---------~~~~~p~~~~~--dg-~~l~~~~~~~~~v~~~~~~~~g~~~~~~---~~ 139 (361)
T 3scy_A 75 AAVSAFAFDKEKGTLHLLNTQK---------TMGADPCYLTT--NG-KNIVTANYSGGSITVFPIGQDGALLPAS---DV 139 (361)
T ss_dssp CEEEEEEEETTTTEEEEEEEEE---------CSSSCEEEEEE--CS-SEEEEEETTTTEEEEEEBCTTSCBCSCS---EE
T ss_pred CcEEEEEEeCCCCcEEEeeEec---------cCCCCcEEEEE--CC-CEEEEEECCCCEEEEEEeCCCCcCcccc---ee
Confidence 68999999864 222222221 12345677777 66 5555554 68899999997543211100 00
Q ss_pred eeccc--ccccCCCcccEEEEEEccCCCeEE-Ee-cCCcEEEEEcCCCCCCCCccCCccccccCCCc---ceee-CCcCC
Q 021160 80 DTFCP--RHLIGKNNIHITGLAYSNTSELLI-SY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEP---QVYS-GHRNS 151 (316)
Q Consensus 80 ~~~~~--~~~~~~~~~~i~~~~~~~~~~~l~-s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~ 151 (316)
..... ......+...+.+++|+|+|++++ +. .++.|.+|++.......... ..... .... ...
T Consensus 140 ~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~-------~l~~~~~~~~~~~~~~-- 210 (361)
T 3scy_A 140 IEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKE-------KFLTKGTPEAFKVAPG-- 210 (361)
T ss_dssp EECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCC-------CCEEEEEEEEEECCTT--
T ss_pred EEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCccccc-------ceeecccccceecCCC--
Confidence 00000 000012234578899999998554 44 48899999987651000000 00000 1111 222
Q ss_pred ceeeeEEEecCCCcEEEEec-cCCeEEEEeccCCee--EEEee---cCccceEEEEEcCCCCeEEEEeC--CCcEEEecC
Q 021160 152 QTVKGVNFFGPNDEYVMSGS-DCGHLFIWKKKGGKL--VRLMV---GDRHVVNQLEPHPHIPMFATCGI--EKTVKLWAP 223 (316)
Q Consensus 152 ~~i~~~~~~~~~~~~l~~~~-~dg~v~~wd~~~~~~--~~~~~---~~~~~v~~~~~~p~~~~l~s~~~--d~~i~iwd~ 223 (316)
..+..++| +|+|+++++++ .++.|.+|++.+++. +..+. .+...+..++|+|++++|++++. ++.|.+|++
T Consensus 211 ~~~~~~~~-spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~ 289 (361)
T 3scy_A 211 SGPRHLIF-NSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKV 289 (361)
T ss_dssp CCEEEEEE-CTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEE
T ss_pred CCCeEEEE-cCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEE
Confidence 23788999 99999887776 689999999998765 23332 23345689999999998866554 489999998
Q ss_pred C--CCCCC---CCCCCcccceeeeecCCCCceeEEec-CCCeEEEEEecc
Q 021160 224 M--PTDFP---PLPDNAEKIMKANKQGREDHSRITLT-PDVIMHVLRLQR 267 (316)
Q Consensus 224 ~--~~~~~---~~~~~~~~~~~~~~~~~~~~~~~s~~-~d~~~~~w~~~~ 267 (316)
. ++.+. .+.. ...+..++ +++++++++.+. .++.+.+|++..
T Consensus 290 ~~~~g~~~~~~~~~~-g~~~~~~~-~spdg~~l~~~~~~~~~v~v~~~d~ 337 (361)
T 3scy_A 290 DETNGTLTKVGYQLT-GIHPRNFI-ITPNGKYLLVACRDTNVIQIFERDQ 337 (361)
T ss_dssp CTTTCCEEEEEEEEC-SSCCCEEE-ECTTSCEEEEEETTTTEEEEEEECT
T ss_pred cCCCCcEEEeeEecC-CCCCceEE-ECCCCCEEEEEECCCCCEEEEEEEC
Confidence 6 33321 1211 22333344 788888776665 679999987653
No 163
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.71 E-value=1.8e-15 Score=128.21 Aligned_cols=226 Identities=12% Similarity=0.073 Sum_probs=149.2
Q ss_pred EEECCCCCcEEEEEec-CCc--EEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEe-cCCcE
Q 021160 40 IVIDPRNPNYFAVGGS-DEY--ARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-NDELV 115 (316)
Q Consensus 40 ~~~~~~~~~~l~~g~~-dg~--v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i 115 (316)
.+|+|+| ++|+.++. ++. |.+||+.+++. ..+..++...+..+.|+|+|+.|+.. .++.|
T Consensus 41 ~~~SpDg-~~l~~~~~~~g~~~l~~~d~~~g~~---------------~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l 104 (388)
T 3pe7_A 41 KCFTRDG-SKLLFGGAFDGPWNYYLLDLNTQVA---------------TQLTEGRGDNTFGGFLSPDDDALFYVKDGRNL 104 (388)
T ss_dssp CCBCTTS-CEEEEEECTTSSCEEEEEETTTCEE---------------EECCCSSCBCSSSCEECTTSSEEEEEETTTEE
T ss_pred ccCCCCC-CEEEEEEcCCCCceEEEEeCCCCce---------------EEeeeCCCCCccceEEcCCCCEEEEEeCCCeE
Confidence 7899999 77777766 663 88889887762 12224444444467899999977774 67899
Q ss_pred EEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEE-ecCCCcEEEEe----------------------cc
Q 021160 116 YLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNF-FGPNDEYVMSG----------------------SD 172 (316)
Q Consensus 116 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~l~~~----------------------~~ 172 (316)
++||+.++ +....+..+... +....| .++++.+++.. ..
T Consensus 105 ~~~d~~~g----------------~~~~~~~~~~~~--~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (388)
T 3pe7_A 105 MRVDLATL----------------EENVVYQVPAEW--VGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKP 166 (388)
T ss_dssp EEEETTTC----------------CEEEEEECCTTE--EEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCC
T ss_pred EEEECCCC----------------cceeeeechhhc--ccccceeECCCCCeeccccccCcccccccccchhhhhhccCC
Confidence 99999887 444444444432 332222 27899888742 23
Q ss_pred CCeEEEEeccCCeeEEEeecCccceEEEEEcC-CCCeEEEEeCC------CcEEEecCCCCCCCCCCCCcc--cceeeee
Q 021160 173 CGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHP-HIPMFATCGIE------KTVKLWAPMPTDFPPLPDNAE--KIMKANK 243 (316)
Q Consensus 173 dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p-~~~~l~s~~~d------~~i~iwd~~~~~~~~~~~~~~--~~~~~~~ 243 (316)
+..|++||+.+++.. .+..+...+..++|+| +++.|+..+.+ ..|.++++.++....+..+.. .+. ...
T Consensus 167 ~~~l~~~d~~~g~~~-~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~-~~~ 244 (388)
T 3pe7_A 167 CCRLMRVDLKTGEST-VILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCT-HEF 244 (388)
T ss_dssp CEEEEEEETTTCCEE-EEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEE-EEE
T ss_pred cceEEEEECCCCceE-EeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccc-cce
Confidence 478999999988754 4444566789999999 99988877653 378888888776555554442 333 334
Q ss_pred cCCCCceeEEecC--C---CeEEEEEecccCcceeE---------------Eeeccccccccc---------CCCCeEEE
Q 021160 244 QGREDHSRITLTP--D---VIMHVLRLQRRQTLAYR---------------ERRYNAADFESD---------EEEGETYL 294 (316)
Q Consensus 244 ~~~~~~~~~s~~~--d---~~~~~w~~~~~~~~~~~---------------~~~~~~~~~~~~---------~~~~~v~~ 294 (316)
|+++++.++..+. + ..+.+|++.+++..... .++|++..++.. .....|++
T Consensus 245 ~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~ 324 (388)
T 3pe7_A 245 WVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYV 324 (388)
T ss_dssp ECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEE
T ss_pred ECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEE
Confidence 8898887654332 2 24999998876532221 256666666532 44557999
Q ss_pred EeccCCC
Q 021160 295 LGFSDSD 301 (316)
Q Consensus 295 ~~~~~~~ 301 (316)
++...+.
T Consensus 325 ~d~~~~~ 331 (388)
T 3pe7_A 325 FNMKNGT 331 (388)
T ss_dssp EETTTTE
T ss_pred EeccCCc
Confidence 9987653
No 164
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.70 E-value=8.5e-15 Score=123.25 Aligned_cols=233 Identities=9% Similarity=0.054 Sum_probs=145.5
Q ss_pred cceEEEEECCCCCcEEEEEecCCcEEEEeCc-CCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCe--EEEe-
Q 021160 35 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIR-KCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSEL--LISY- 110 (316)
Q Consensus 35 ~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--l~s~- 110 (316)
..+..++|+|++ ++|++++.+ .|.+|++. ++++.. .... ..+ .....++|+|+|++ ++++
T Consensus 40 ~~~~~~a~spdg-~~l~~~~~~-~v~~~~~~~~g~~~~------------~~~~-~~~-g~~~~~~~spdg~~l~~~~~~ 103 (365)
T 1jof_A 40 EPISWMTFDHER-KNIYGAAMK-KWSSFAVKSPTEIVH------------EASH-PIG-GHPRANDADTNTRAIFLLAAK 103 (365)
T ss_dssp CCCSEEEECTTS-SEEEEEEBT-EEEEEEEEETTEEEE------------EEEE-ECC-SSGGGGCTTSCCEEEEEEECS
T ss_pred CCCcEEEECCCC-CEEEEEccc-eEEEEEECCCCCEEE------------eeEe-ecC-CCCccEEECCCCCEEEEEEec
Confidence 357889999999 788888887 99999997 665210 0000 000 12335789999983 4343
Q ss_pred -------------cCCcEEEEEcCC-CCCCCCccCCccccccCCCcceeeC--CcCCceeeeEEEecCCCcEEEEec-cC
Q 021160 111 -------------NDELVYLFEKNM-GLGPSPLSLSPEDLQKREEPQVYSG--HRNSQTVKGVNFFGPNDEYVMSGS-DC 173 (316)
Q Consensus 111 -------------~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~l~~~~-~d 173 (316)
.++.+.+|++.. + .....+.. +.....+.+++| +|+|++++++. .+
T Consensus 104 ~~~~~~~~~~~~~~~g~v~v~~~~~~g----------------~~~~~~~~~~~~~~~~~~~~~~-spdG~~l~~~~~~~ 166 (365)
T 1jof_A 104 QPPYAVYANPFYKFAGYGNVFSVSETG----------------KLEKNVQNYEYQENTGIHGMVF-DPTETYLYSADLTA 166 (365)
T ss_dssp STTCCEEEEEESSSCCEEEEEEECTTC----------------CEEEEEEEEECCTTCCEEEEEE-CTTSSEEEEEETTT
T ss_pred CCcceeccceeecCCceEEEEccCCCC----------------cCcceEeeEEeCCCCcceEEEE-CCCCCEEEEEcCCC
Confidence 588999999973 3 22222221 111133889999 99999888765 46
Q ss_pred CeEEEEecc-CCeeE--EEee--cCccceEEEEEcCCCCeEEEEeC-CCcEEEecCC--CCCC-------CCCCCC----
Q 021160 174 GHLFIWKKK-GGKLV--RLMV--GDRHVVNQLEPHPHIPMFATCGI-EKTVKLWAPM--PTDF-------PPLPDN---- 234 (316)
Q Consensus 174 g~v~~wd~~-~~~~~--~~~~--~~~~~v~~~~~~p~~~~l~s~~~-d~~i~iwd~~--~~~~-------~~~~~~---- 234 (316)
+.|++|++. +++.. ..+. .|...+..++|+|+++++++++. ++.|.+|++. ++++ ..++..
T Consensus 167 ~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~ 246 (365)
T 1jof_A 167 NKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDR 246 (365)
T ss_dssp TEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCB
T ss_pred CEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCc
Confidence 899999998 77653 2333 23567899999999999877764 6899999764 3332 123221
Q ss_pred cc------cceeeeecCCCCceeEEecCC-C-----eEEEEEec-ccCcce---eE----------Eeec---ccccccc
Q 021160 235 AE------KIMKANKQGREDHSRITLTPD-V-----IMHVLRLQ-RRQTLA---YR----------ERRY---NAADFES 285 (316)
Q Consensus 235 ~~------~~~~~~~~~~~~~~~~s~~~d-~-----~~~~w~~~-~~~~~~---~~----------~~~~---~~~~~~~ 285 (316)
.. .+..+..++++++++++...+ . .+.+|++. +++... .. .++| ++..+..
T Consensus 247 ~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v 326 (365)
T 1jof_A 247 DPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAI 326 (365)
T ss_dssp CTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEE
T ss_pred ccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEE
Confidence 11 232333278888877655432 3 89999996 343221 11 1245 4555554
Q ss_pred cC-CCCeEEEEeccCC
Q 021160 286 DE-EEGETYLLGFSDS 300 (316)
Q Consensus 286 ~~-~~~~v~~~~~~~~ 300 (316)
.. +++.|.+|+...+
T Consensus 327 ~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 327 TDDQEGWLEIYRWKDE 342 (365)
T ss_dssp ECSSSCEEEEEEEETT
T ss_pred EEcCCCeEEEEEEchh
Confidence 43 4577877776543
No 165
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.70 E-value=1.5e-14 Score=117.46 Aligned_cols=223 Identities=11% Similarity=0.145 Sum_probs=147.2
Q ss_pred eeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEE-CCCCCcEEEEEec-CCcEEEEeCcCCcccCCCCCCCCce
Q 021160 3 LFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVI-DPRNPNYFAVGGS-DEYARVYDIRKCHWYSPISSDTPVD 80 (316)
Q Consensus 3 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~-~~~~~~~l~~g~~-dg~v~~wd~~~~~~~~~~~~~~~~~ 80 (316)
+.|++||.. .+....+.... ...+|...+.++++ .+++ +++++... ++.|.+||. +++.
T Consensus 51 ~~i~~~d~~-g~~~~~~~~~~-----~~~~~~~~p~~i~~~~~~g-~l~v~~~~~~~~i~~~d~-~g~~----------- 111 (286)
T 1q7f_A 51 HRIQIFDKE-GRFKFQFGECG-----KRDSQLLYPNRVAVVRNSG-DIIVTERSPTHQIQIYNQ-YGQF----------- 111 (286)
T ss_dssp TEEEEECTT-SCEEEEECCBS-----SSTTCBSSEEEEEEETTTT-EEEEEECGGGCEEEEECT-TSCE-----------
T ss_pred CEEEEECCC-CcEEEEecccC-----CCcccccCceEEEEEcCCC-eEEEEcCCCCCEEEEECC-CCcE-----------
Confidence 568888865 22222221100 01234567899999 5666 66666643 889999994 4441
Q ss_pred ecccccccCCCcccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEE
Q 021160 81 TFCPRHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNF 159 (316)
Q Consensus 81 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 159 (316)
...+...+...+..+++.++|+++++. .++.|.+||.... ....+........+..+++
T Consensus 112 ---~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~-----------------~~~~~~~~~~~~~p~~i~~ 171 (286)
T 1q7f_A 112 ---VRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGN-----------------VLHKFGCSKHLEFPNGVVV 171 (286)
T ss_dssp ---EEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSC-----------------EEEEEECTTTCSSEEEEEE
T ss_pred ---EEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCC-----------------EEEEeCCCCccCCcEEEEE
Confidence 111212334567899999999988775 5889999996542 3444432111123889998
Q ss_pred ecCCCcEEEEeccCCeEEEEeccCCeeEEEeecC--ccceEEEEEcCCCCeEEEEeCCC-cEEEecCCCCCCCCCCCCcc
Q 021160 160 FGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGD--RHVVNQLEPHPHIPMFATCGIEK-TVKLWAPMPTDFPPLPDNAE 236 (316)
Q Consensus 160 ~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~--~~~v~~~~~~p~~~~l~s~~~d~-~i~iwd~~~~~~~~~~~~~~ 236 (316)
++++.++++...++.|++|+.. ++.+..+..+ ...+..++++|+++++++...++ .|.+|+.....+..+..+..
T Consensus 172 -~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~~~~ 249 (286)
T 1q7f_A 172 -NDKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALESKVK 249 (286)
T ss_dssp -CSSSEEEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEEESSC
T ss_pred -CCCCCEEEEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCEEEEEcccCC
Confidence 8999988888889999999985 6666666433 35788999999999888887776 99999976544433332221
Q ss_pred --cceeeeecCCCCceeEEecCCCeEEEEEeccc
Q 021160 237 --KIMKANKQGREDHSRITLTPDVIMHVLRLQRR 268 (316)
Q Consensus 237 --~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~ 268 (316)
.+..++ +.++++++++ +.++.|++|++...
T Consensus 250 ~~~~~~i~-~~~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 250 HAQCFDVA-LMDDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp CSCEEEEE-EETTTEEEEE-ETTTEEEEEECSCC
T ss_pred CCcceeEE-ECCCCcEEEE-CCCCeEEEEEcccc
Confidence 122333 5677877777 56899999987543
No 166
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.69 E-value=2.6e-15 Score=126.38 Aligned_cols=223 Identities=10% Similarity=0.042 Sum_probs=139.6
Q ss_pred eeEEEEee-CCCcceEEEeccccccccCCCCccceEEEEECCCCCc--EEEEEe-------------cCCcEEEEeCcC-
Q 021160 4 FNMLFDLR-SDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPN--YFAVGG-------------SDEYARVYDIRK- 66 (316)
Q Consensus 4 ~v~vwd~~-~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~--~l~~g~-------------~dg~v~~wd~~~- 66 (316)
.|.+||+. +.+........ . .+.+.+++|+|++ + +++++. .++.+.+|++..
T Consensus 61 ~v~~~~~~~~g~~~~~~~~~-~---------~g~~~~~~~spdg-~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~ 129 (365)
T 1jof_A 61 KWSSFAVKSPTEIVHEASHP-I---------GGHPRANDADTNT-RAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSET 129 (365)
T ss_dssp EEEEEEEEETTEEEEEEEEE-C---------CSSGGGGCTTSCC-EEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTT
T ss_pred eEEEEEECCCCCEEEeeEee-c---------CCCCccEEECCCC-CEEEEEEecCCcceeccceeecCCceEEEEccCCC
Confidence 68899997 54432222211 0 0124568999999 6 345553 689999999973
Q ss_pred CcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEe--cCCcEEEEEcC-CCCCCCCccCCccccccCCC--
Q 021160 67 CHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY--NDELVYLFEKN-MGLGPSPLSLSPEDLQKREE-- 141 (316)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~--~d~~i~iwd~~-~~~~~~~~~~~~~~~~~~~~-- 141 (316)
+++.. . .......+...+.+++|+|+|++++++ .++.|++|++. ++ +.
T Consensus 130 g~~~~---------~--~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g----------------~~~~ 182 (365)
T 1jof_A 130 GKLEK---------N--VQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASG----------------EVEL 182 (365)
T ss_dssp CCEEE---------E--EEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTS----------------CEEE
T ss_pred CcCcc---------e--EeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCC----------------CEEE
Confidence 43210 0 000001234678899999999966654 47899999997 55 22
Q ss_pred cceeeC--CcCCceeeeEEEecCCCcEEEEecc-CCeEEEEecc--CCeeE---EEee---c----Ccc------ceEEE
Q 021160 142 PQVYSG--HRNSQTVKGVNFFGPNDEYVMSGSD-CGHLFIWKKK--GGKLV---RLMV---G----DRH------VVNQL 200 (316)
Q Consensus 142 ~~~~~~--~~~~~~i~~~~~~~~~~~~l~~~~~-dg~v~~wd~~--~~~~~---~~~~---~----~~~------~v~~~ 200 (316)
...+.. +.. .+..++| +|+|+++++++. ++.|.+|++. +++.. ..+. . |.. .+..+
T Consensus 183 ~~~~~~~~~g~--~p~~~~~-spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i 259 (365)
T 1jof_A 183 VGSVDAPDPGD--HPRWVAM-HPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADV 259 (365)
T ss_dssp EEEEECSSTTC--CEEEEEE-CTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEE
T ss_pred eeeEecCCCCC--CCCEeEE-CCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccE
Confidence 122321 233 3889999 999999887764 7899999865 56543 1222 1 122 47899
Q ss_pred E-EcCCCCeEEEEeCC-C-----cEEEecCC-CCCCCC----CCCCcccceeeeecCC---CCceeEEecC-CCeEEEEE
Q 021160 201 E-PHPHIPMFATCGIE-K-----TVKLWAPM-PTDFPP----LPDNAEKIMKANKQGR---EDHSRITLTP-DVIMHVLR 264 (316)
Q Consensus 201 ~-~~p~~~~l~s~~~d-~-----~i~iwd~~-~~~~~~----~~~~~~~~~~~~~~~~---~~~~~~s~~~-d~~~~~w~ 264 (316)
+ |+|++++|++++.+ . .|.+|++. ++++.. ...+......++ +++ ++++++.+.. ++.+++|+
T Consensus 260 ~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a-~sp~~~dg~~l~v~~~~~~~v~v~~ 338 (365)
T 1jof_A 260 CALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNA-VSPCPWSDEWMAITDDQEGWLEIYR 338 (365)
T ss_dssp EEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCC-EEECTTCTTEEEEECSSSCEEEEEE
T ss_pred EEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccce-ecCCCcCCCEEEEEEcCCCeEEEEE
Confidence 9 99999987766533 2 89999986 444321 111222222233 455 6888887776 49999999
Q ss_pred eccc
Q 021160 265 LQRR 268 (316)
Q Consensus 265 ~~~~ 268 (316)
+...
T Consensus 339 ~~~~ 342 (365)
T 1jof_A 339 WKDE 342 (365)
T ss_dssp EETT
T ss_pred Echh
Confidence 8765
No 167
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.68 E-value=2.3e-14 Score=118.82 Aligned_cols=203 Identities=11% Similarity=0.103 Sum_probs=139.3
Q ss_pred ccceEEEEECCCCCcEEEEEecC------------------------CcEEEEeCcCCcccCCCCCCCCceecccccccC
Q 021160 34 SIRLNAIVIDPRNPNYFAVGGSD------------------------EYARVYDIRKCHWYSPISSDTPVDTFCPRHLIG 89 (316)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~~g~~d------------------------g~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (316)
-+.+.+++++|+| +++++...+ +.|.+||..++++. .....
T Consensus 23 l~~v~~va~d~~G-~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~--------------~~~~~ 87 (329)
T 3fvz_A 23 PGQVSGVALDSKN-NLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEIL--------------QSSGK 87 (329)
T ss_dssp CSCEEEEEECTTC-CEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEE--------------EEECT
T ss_pred cCCceEEEECCCC-CEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEE--------------eccCC
Confidence 3579999999999 788887766 47999999877632 12212
Q ss_pred CCcccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCCCCCCccCCccccccCCCcceee---------CCcCCceeeeEEE
Q 021160 90 KNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYS---------GHRNSQTVKGVNF 159 (316)
Q Consensus 90 ~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~i~~~~~ 159 (316)
++-.....++++++|+++++. .++.|++||..... ..+..+. ++.. ....+++
T Consensus 88 ~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~---------------~~~~~~~~~~~~g~~~~~~~--~P~~ia~ 150 (329)
T 3fvz_A 88 NLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKE---------------GPLLILGRSMQPGSDQNHFC--QPTDVAV 150 (329)
T ss_dssp TTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSS---------------CCSEEESBTTBCCCSTTCCS--SEEEEEE
T ss_pred CccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCe---------------EEEEEecccCCCCCCccccC--CCcEEEE
Confidence 344568899999999988875 68999999986531 1233331 2222 3789999
Q ss_pred ecC-CCcEEEEec-cCCeEEEEeccCCeeEEEeecC----------ccceEEEEEcCC-CCeEEEEeCCCcEEEecCCCC
Q 021160 160 FGP-NDEYVMSGS-DCGHLFIWKKKGGKLVRLMVGD----------RHVVNQLEPHPH-IPMFATCGIEKTVKLWAPMPT 226 (316)
Q Consensus 160 ~~~-~~~~l~~~~-~dg~v~~wd~~~~~~~~~~~~~----------~~~v~~~~~~p~-~~~l~s~~~d~~i~iwd~~~~ 226 (316)
+| ++.++++.+ .++.|++|+ .+++.+..+... -..+..++++|+ +.++++...++.|++|+..++
T Consensus 151 -~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G 228 (329)
T 3fvz_A 151 -EPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTK 228 (329)
T ss_dssp -CTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTC
T ss_pred -eCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCC
Confidence 88 788888886 699999999 457777666422 234889999998 777888888999999999855
Q ss_pred C-CCCC--CCCcccceeeeecCC------CCceeEEecCCCeEEEEEecccCcc
Q 021160 227 D-FPPL--PDNAEKIMKANKQGR------EDHSRITLTPDVIMHVLRLQRRQTL 271 (316)
Q Consensus 227 ~-~~~~--~~~~~~~~~~~~~~~------~~~~~~s~~~d~~~~~w~~~~~~~~ 271 (316)
+ +..+ ..+...+..+. +.+ ++...++...+..+++|++.+++..
T Consensus 229 ~~~~~~~~~~~~~~~~~~~-~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~ 281 (329)
T 3fvz_A 229 EFVREIKHASFGRNVFAIS-YIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEII 281 (329)
T ss_dssp CEEEEECCTTTTTCEEEEE-EETTEEEEEECCCCTTCSCCCCEEEEETTTCCEE
T ss_pred cEEEEEeccccCCCcceee-ecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEE
Confidence 5 3322 22333343333 333 3444444455668999997766443
No 168
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.67 E-value=1.3e-14 Score=131.64 Aligned_cols=191 Identities=10% Similarity=0.029 Sum_probs=127.3
Q ss_pred EEEEC--CCCCcE-EEEEe-cCCcEEEEeCc--C-CcccCCCCCCCCceecccccccC----CCcccEEEEEEccCCCeE
Q 021160 39 AIVID--PRNPNY-FAVGG-SDEYARVYDIR--K-CHWYSPISSDTPVDTFCPRHLIG----KNNIHITGLAYSNTSELL 107 (316)
Q Consensus 39 ~~~~~--~~~~~~-l~~g~-~dg~v~~wd~~--~-~~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~~~~~~~~~l 107 (316)
...|+ |++ +. |+.++ .+..|.++++. . ++ ...+.. .|...+..++|+|+|+.|
T Consensus 81 ~~~~~~SPDg-~~~la~~~~~~~~l~~~~~~~~g~~~---------------~~~l~~~~~~~~~~~~~~~~~spDg~~l 144 (662)
T 3azo_A 81 PWAGVPRPAG-GPLLVFTHFGDQRLYAFEPDAPGGAV---------------PRPLTPVSAVGGGLRWADPVLLPERGEV 144 (662)
T ss_dssp CEEEECCSSS-SCEEEEEBTTTCCEEEECTTSTTCCC---------------CEECSCCCCSTTCEEEEEEEEETTTTEE
T ss_pred cceeeeecCC-CeEEEEEECCCCeEEEEcCCCCCCCC---------------CEeccCCccCCCCccccCcEECCCCCEE
Confidence 45555 999 55 55443 35667777765 2 32 111111 156778899999999977
Q ss_pred EEe-cC----------CcEEEEEcCC------CCCCCCccCCccccccCCCcceee-CCcCCceeeeEEEecCCCcEEEE
Q 021160 108 ISY-ND----------ELVYLFEKNM------GLGPSPLSLSPEDLQKREEPQVYS-GHRNSQTVKGVNFFGPNDEYVMS 169 (316)
Q Consensus 108 ~s~-~d----------~~i~iwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~l~~ 169 (316)
+.+ .+ ..|++||+.+ + .. ..+. .+.. .+..++| +|||++|+.
T Consensus 145 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~----------------~~-~~l~~~~~~--~~~~~~~-SpDG~~la~ 204 (662)
T 3azo_A 145 WCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRS----------------AV-RELSDDAHR--FVTGPRL-SPDGRQAVW 204 (662)
T ss_dssp EEEEEEECSSSTTCEEEEEEEEETTSTTTTCGG----------------GS-EESSCSCSS--EECCCEE-CTTSSEEEE
T ss_pred EEEEecccCCCCCCceeEEEEEECCCCccccCC----------------ce-eEEEecCCC--cccCceE-CCCCCEEEE
Confidence 764 44 4799999987 4 22 3333 3333 3788898 999999998
Q ss_pred eccC--------CeEEEEecc-CC---eeEEEeecCccceEEEEEcCCCCeEEEEeCCC--cEEEecCCCCCCCCCCCCc
Q 021160 170 GSDC--------GHLFIWKKK-GG---KLVRLMVGDRHVVNQLEPHPHIPMFATCGIEK--TVKLWAPMPTDFPPLPDNA 235 (316)
Q Consensus 170 ~~~d--------g~v~~wd~~-~~---~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~--~i~iwd~~~~~~~~~~~~~ 235 (316)
++.+ ..|++||+. ++ +.......|...+..++|+|+++++++++.++ .|.+||+.+++...+..+.
T Consensus 205 ~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~ 284 (662)
T 3azo_A 205 LAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRRE 284 (662)
T ss_dssp EEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCS
T ss_pred EECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeeccccc
Confidence 7754 379999998 57 44444455678899999999999888888888 6667777666533333222
Q ss_pred ccce--------eeeecCCCCceeEEecCCCeEEEEEec
Q 021160 236 EKIM--------KANKQGREDHSRITLTPDVIMHVLRLQ 266 (316)
Q Consensus 236 ~~~~--------~~~~~~~~~~~~~s~~~d~~~~~w~~~ 266 (316)
..+. ....+++++.++++.+. +..++|.+.
T Consensus 285 ~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d 322 (662)
T 3azo_A 285 EEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILD 322 (662)
T ss_dssp SBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEE
T ss_pred ccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEE
Confidence 2221 12224567888888888 999999554
No 169
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.67 E-value=1.2e-14 Score=120.61 Aligned_cols=228 Identities=10% Similarity=0.004 Sum_probs=152.9
Q ss_pred eeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceec
Q 021160 3 LFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTF 82 (316)
Q Consensus 3 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~ 82 (316)
|.|.+||..+.+....+.. ++-.....++++|++ +++++...++.|++|+...... .+..+
T Consensus 69 ~~i~~~d~~~g~~~~~~~~----------~~~~~p~gia~d~~g-~l~v~d~~~~~v~~~~~~g~~~--------~~~~~ 129 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGK----------NLFYLPHGLSIDTDG-NYWVTDVALHQVFKLDPHSKEG--------PLLIL 129 (329)
T ss_dssp CCEEEECTTTCCEEEEECT----------TTCSSEEEEEECTTS-CEEEEETTTTEEEEECTTCSSC--------CSEEE
T ss_pred CcEEEEECCCCeEEeccCC----------CccCCceEEEECCCC-CEEEEECCCCEEEEEeCCCCeE--------EEEEe
Confidence 5688898876654322211 234568899999999 7888888899999999864310 01111
Q ss_pred cc---ccccCCCcccEEEEEEcc-CCCeEEEe--cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcC------
Q 021160 83 CP---RHLIGKNNIHITGLAYSN-TSELLISY--NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRN------ 150 (316)
Q Consensus 83 ~~---~~~~~~~~~~i~~~~~~~-~~~~l~s~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 150 (316)
.. ......+......++++| ++.++++. .++.|++|+.... ....+.....
T Consensus 130 ~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~-----------------~~~~~~~~g~~~~~~~ 192 (329)
T 3fvz_A 130 GRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGK-----------------FVTQWGEESSGSSPRP 192 (329)
T ss_dssp SBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSC-----------------EEEEECEECCSSSCCT
T ss_pred cccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCC-----------------EEEEeccCCCCCCCCC
Confidence 00 000023345688999999 78888884 4899999995432 3333321110
Q ss_pred --CceeeeEEEecCC-CcEEEEeccCCeEEEEeccCCeeEEEee--cCccceEEEEEcC------CCCeEEEEeCCCcEE
Q 021160 151 --SQTVKGVNFFGPN-DEYVMSGSDCGHLFIWKKKGGKLVRLMV--GDRHVVNQLEPHP------HIPMFATCGIEKTVK 219 (316)
Q Consensus 151 --~~~i~~~~~~~~~-~~~l~~~~~dg~v~~wd~~~~~~~~~~~--~~~~~v~~~~~~p------~~~~l~s~~~d~~i~ 219 (316)
......+++ +|+ +.++++...++.|++|+..+++.+..+. .+...+..++|+| +++.+++...+..|+
T Consensus 193 ~~~~~p~gia~-d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~ 271 (329)
T 3fvz_A 193 GQFSVPHSLAL-VPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGF 271 (329)
T ss_dssp TEESCEEEEEE-ETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEE
T ss_pred cccCCCcEEEE-ECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEE
Confidence 012788998 888 7888888889999999999899888874 3556788999999 333333333445899
Q ss_pred EecCCCCC-CCCC---CCCcccceeeeecCCCCceeEEecCCCeEEEEEeccc
Q 021160 220 LWAPMPTD-FPPL---PDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR 268 (316)
Q Consensus 220 iwd~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~ 268 (316)
+|++.+++ +..+ ..+......++ +++++.++++...++.|++|++...
T Consensus 272 ~~~~~~g~~~~~~~~~~~~~~~p~~ia-~~~dG~lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 272 VMNFSSGEIIDVFKPVRKHFDMPHDIV-ASEDGTVYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp EEETTTCCEEEEECCSSSCCSSEEEEE-ECTTSEEEEEESSSCCEEEEEEEEC
T ss_pred EEEcCCCeEEEEEcCCCCccCCeeEEE-ECCCCCEEEEECCCCEEEEEeCCcc
Confidence 99988876 3222 23444444555 6778888889888999999987643
No 170
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.66 E-value=2.2e-15 Score=127.67 Aligned_cols=219 Identities=11% Similarity=0.040 Sum_probs=137.6
Q ss_pred eeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecc
Q 021160 4 FNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFC 83 (316)
Q Consensus 4 ~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~ 83 (316)
.|.+||+.+.+..++.. +|...+..++|+|++ +.|+.++.++.|++||+.+++..
T Consensus 61 ~l~~~d~~~g~~~~lt~-----------~~~~~~~~~~~spdg-~~l~~~~~~~~l~~~d~~~g~~~------------- 115 (388)
T 3pe7_A 61 NYYLLDLNTQVATQLTE-----------GRGDNTFGGFLSPDD-DALFYVKDGRNLMRVDLATLEEN------------- 115 (388)
T ss_dssp EEEEEETTTCEEEECCC-----------SSCBCSSSCEECTTS-SEEEEEETTTEEEEEETTTCCEE-------------
T ss_pred eEEEEeCCCCceEEeee-----------CCCCCccceEEcCCC-CEEEEEeCCCeEEEEECCCCcce-------------
Confidence 46777776654433221 134445567899999 88999998899999999987621
Q ss_pred cccccCCCcccEEEE--EEccCCCeEEEe-----------------------cCCcEEEEEcCCCCCCCCccCCcccccc
Q 021160 84 PRHLIGKNNIHITGL--AYSNTSELLISY-----------------------NDELVYLFEKNMGLGPSPLSLSPEDLQK 138 (316)
Q Consensus 84 ~~~~~~~~~~~i~~~--~~~~~~~~l~s~-----------------------~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 138 (316)
.+...+...+... .++|++++++.. .+..|++||+.++
T Consensus 116 --~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g--------------- 178 (388)
T 3pe7_A 116 --VVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTG--------------- 178 (388)
T ss_dssp --EEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTC---------------
T ss_pred --eeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCC---------------
Confidence 1112223333333 348999877641 2467999999876
Q ss_pred CCCcceeeCCcCCceeeeEEEecC-CCcEEEEeccC------CeEEEEeccCCeeEEEeecCc--cceEEEEEcCCCCeE
Q 021160 139 REEPQVYSGHRNSQTVKGVNFFGP-NDEYVMSGSDC------GHLFIWKKKGGKLVRLMVGDR--HVVNQLEPHPHIPMF 209 (316)
Q Consensus 139 ~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~d------g~v~~wd~~~~~~~~~~~~~~--~~v~~~~~~p~~~~l 209 (316)
+ ...+..+... +..+.| +| +|+.|+..... ..|+++|...++. ..+..+. ..+..++|+|+++.|
T Consensus 179 -~-~~~l~~~~~~--~~~~~~-sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~l 252 (388)
T 3pe7_A 179 -E-STVILQENQW--LGHPIY-RPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTHEFWVPDGSAL 252 (388)
T ss_dssp -C-EEEEEEESSC--EEEEEE-ETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEEEEECTTSSCE
T ss_pred -c-eEEeecCCcc--ccccEE-CCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCcccccceECCCCCEE
Confidence 3 3344444433 888998 99 99988877653 3788888875553 4444443 357789999999987
Q ss_pred EEEeC-CC----cEEEecCCCCCCCCC---CCCcccc--eeeeecCCCCceeEEe---------cCCCeEEEEEecccCc
Q 021160 210 ATCGI-EK----TVKLWAPMPTDFPPL---PDNAEKI--MKANKQGREDHSRITL---------TPDVIMHVLRLQRRQT 270 (316)
Q Consensus 210 ~s~~~-d~----~i~iwd~~~~~~~~~---~~~~~~~--~~~~~~~~~~~~~~s~---------~~d~~~~~w~~~~~~~ 270 (316)
+..+. ++ .|++||+.+++...+ .++.... .....+++++..++.. ..+..|.+|++.+++.
T Consensus 253 ~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~ 332 (388)
T 3pe7_A 253 VYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ 332 (388)
T ss_dssp EEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEE
T ss_pred EEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCce
Confidence 65443 22 399999998763322 2210000 0111367777766643 4567899999887643
No 171
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.66 E-value=1.2e-13 Score=112.03 Aligned_cols=204 Identities=8% Similarity=0.135 Sum_probs=142.8
Q ss_pred CCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEE-ccCCCeEEE
Q 021160 31 PMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAY-SNTSELLIS 109 (316)
Q Consensus 31 ~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~l~s 109 (316)
.+|...+.+++++|++ +++++...++.|.+||.. ++.. ..+.......++...+..+++ .++++++++
T Consensus 26 ~g~~~~p~~v~~~~~g-~l~v~~~~~~~i~~~d~~-g~~~---------~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~ 94 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQN-DIIVADTNNHRIQIFDKE-GRFK---------FQFGECGKRDSQLLYPNRVAVVRNSGDIIVT 94 (286)
T ss_dssp TTCBSCEEEEEECTTC-CEEEEEGGGTEEEEECTT-SCEE---------EEECCBSSSTTCBSSEEEEEEETTTTEEEEE
T ss_pred CCccCCCceEEECCCC-CEEEEECCCCEEEEECCC-CcEE---------EEecccCCCcccccCceEEEEEcCCCeEEEE
Confidence 3566789999999998 788888889999999987 3311 111111111234557889999 577887777
Q ss_pred e-c-CCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCeeE
Q 021160 110 Y-N-DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLV 187 (316)
Q Consensus 110 ~-~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~ 187 (316)
. . ++.|.+||.. + +....+.... ...+.++++ +++++++++...++.|++|+.. ++.+
T Consensus 95 ~~~~~~~i~~~d~~-g----------------~~~~~~~~~~-~~~~~~i~~-~~~g~l~v~~~~~~~i~~~~~~-g~~~ 154 (286)
T 1q7f_A 95 ERSPTHQIQIYNQY-G----------------QFVRKFGATI-LQHPRGVTV-DNKGRIIVVECKVMRVIIFDQN-GNVL 154 (286)
T ss_dssp ECGGGCEEEEECTT-S----------------CEEEEECTTT-CSCEEEEEE-CTTSCEEEEETTTTEEEEECTT-SCEE
T ss_pred cCCCCCEEEEECCC-C----------------cEEEEecCcc-CCCceEEEE-eCCCCEEEEECCCCEEEEEcCC-CCEE
Confidence 5 3 8999999943 3 3444443221 123889998 8999988888888999999965 6666
Q ss_pred EEee--cCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCCCCCCCCC--cccceeeeecCCCCceeEEecCCC-eEEE
Q 021160 188 RLMV--GDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDN--AEKIMKANKQGREDHSRITLTPDV-IMHV 262 (316)
Q Consensus 188 ~~~~--~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~s~~~d~-~~~~ 262 (316)
..+. .+...+..++++|+++++++...++.|++|+.....+..+... ...+..++ ..++++++++...++ .|.+
T Consensus 155 ~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~-~d~~G~l~v~~~~~~~~i~~ 233 (286)
T 1q7f_A 155 HKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVG-INSNGEILIADNHNNFNLTI 233 (286)
T ss_dssp EEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCCEEEEESCTTTSCSEEEEE-ECTTCCEEEEECSSSCEEEE
T ss_pred EEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCCCEEEEEccCCccCCCcEEE-ECCCCCEEEEeCCCCEEEEE
Confidence 6654 3445689999999999888888899999999865543333222 23333444 667888888888776 9999
Q ss_pred EEec
Q 021160 263 LRLQ 266 (316)
Q Consensus 263 w~~~ 266 (316)
|+..
T Consensus 234 ~~~~ 237 (286)
T 1q7f_A 234 FTQD 237 (286)
T ss_dssp ECTT
T ss_pred ECCC
Confidence 9854
No 172
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.60 E-value=4e-14 Score=128.46 Aligned_cols=200 Identities=12% Similarity=0.136 Sum_probs=131.7
Q ss_pred CccceEEEEECCCCCcEEEEEecC----------CcEEEEeCcC------CcccCCCCCCCCceecccccccC-CCcccE
Q 021160 33 NSIRLNAIVIDPRNPNYFAVGGSD----------EYARVYDIRK------CHWYSPISSDTPVDTFCPRHLIG-KNNIHI 95 (316)
Q Consensus 33 h~~~v~~~~~~~~~~~~l~~g~~d----------g~v~~wd~~~------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i 95 (316)
|...+.+++|+|+| +.|+.++.+ ..|++||+.+ ++ ...+ . .+...+
T Consensus 128 ~~~~~~~~~~spDg-~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~---------------~~~l-~~~~~~~~ 190 (662)
T 3azo_A 128 GGLRWADPVLLPER-GEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSA---------------VREL-SDDAHRFV 190 (662)
T ss_dssp TCEEEEEEEEETTT-TEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGG---------------SEES-SCSCSSEE
T ss_pred CCccccCcEECCCC-CEEEEEEecccCCCCCCceeEEEEEECCCCccccCCc---------------eeEE-EecCCCcc
Confidence 56678999999999 788887766 5899999987 43 1222 2 344577
Q ss_pred EEEEEccCCCeEEE-ecC--------CcEEEEEcC-CCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCc
Q 021160 96 TGLAYSNTSELLIS-YND--------ELVYLFEKN-MGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDE 165 (316)
Q Consensus 96 ~~~~~~~~~~~l~s-~~d--------~~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 165 (316)
..++|+|||+.|+. +.+ ..|++||+. ++. .........++... +..++| +|+|+
T Consensus 191 ~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~-------------~~~~~~l~~~~~~~--~~~~~~-spdg~ 254 (662)
T 3azo_A 191 TGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGR-------------FADTRTLLGGPEEA--IAQAEW-APDGS 254 (662)
T ss_dssp CCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSC-------------EEEEEEEEEETTBC--EEEEEE-CTTSC
T ss_pred cCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCc-------------ccccEEeCCCCCce--EcceEE-CCCCe
Confidence 88999999997775 433 379999997 330 00122223333433 889999 99999
Q ss_pred EEEEeccCC--eEEEEeccCCeeEEEeecCccc--------eEEEEEcCCCCeEEEEeCCCcEEEe--cCCCCCCCCCCC
Q 021160 166 YVMSGSDCG--HLFIWKKKGGKLVRLMVGDRHV--------VNQLEPHPHIPMFATCGIEKTVKLW--APMPTDFPPLPD 233 (316)
Q Consensus 166 ~l~~~~~dg--~v~~wd~~~~~~~~~~~~~~~~--------v~~~~~~p~~~~l~s~~~d~~i~iw--d~~~~~~~~~~~ 233 (316)
+++++..++ .|++||+.+++.......+... +..++|+|+++++++++. +.++|| |+.+++...+..
T Consensus 255 l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~~~~l~~ 333 (662)
T 3azo_A 255 LIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGELVDAAG 333 (662)
T ss_dssp EEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTEEEECCS
T ss_pred EEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCcEEEecC
Confidence 888888888 6777777777755444433222 567889999999999988 999999 666666666665
Q ss_pred CcccceeeeecCCCCceeEEecCCCeEEEEEec
Q 021160 234 NAEKIMKANKQGREDHSRITLTPDVIMHVLRLQ 266 (316)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~ 266 (316)
+...+........+.-.+++.+.+....+|.+.
T Consensus 334 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d 366 (662)
T 3azo_A 334 PWTEWAATLTVSGTRAVGVAASPRTAYEVVELD 366 (662)
T ss_dssp SCCEEEEEEEEETTEEEEEEEETTEEEEEEEEE
T ss_pred CCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEE
Confidence 554443331122222344455666555555443
No 173
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.59 E-value=2.6e-13 Score=113.10 Aligned_cols=202 Identities=10% Similarity=0.094 Sum_probs=128.7
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecC---C--cEEEEeCcCCcccCCCCCC
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSD---E--YARVYDIRKCHWYSPISSD 76 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~d---g--~v~~wd~~~~~~~~~~~~~ 76 (316)
.+.|.+||+.+.+...+ ..+..++|+|+| ++|+..+.+ + .|.+|++.+++.
T Consensus 42 ~~~l~~~d~~~~~~~~l----------------~~~~~~~~SpDg-~~la~~~~~~~~~~~~l~~~~~~~g~~------- 97 (347)
T 2gop_A 42 ENTIVIENLKNNARRFI----------------ENATMPRISPDG-KKIAFMRANEEKKVSEIWVADLETLSS------- 97 (347)
T ss_dssp EEEEEEEETTTCCEEEE----------------ESCEEEEECTTS-SEEEEEEEETTTTEEEEEEEETTTTEE-------
T ss_pred cceEEEEeCCCCceEEc----------------ccCCCeEECCCC-CEEEEEEeccCCCcceEEEEECCCCce-------
Confidence 35677888876554322 147889999999 777776543 3 377788877652
Q ss_pred CCceecccccccCCCcccEEEEEEccCCCeEEEe-cC---------------------------CcEEEEEcCCCCCCCC
Q 021160 77 TPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-ND---------------------------ELVYLFEKNMGLGPSP 128 (316)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d---------------------------~~i~iwd~~~~~~~~~ 128 (316)
..+.. +.. +..++|+|+|+.|+.. .+ ..|++||+.++
T Consensus 98 --------~~l~~-~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~----- 162 (347)
T 2gop_A 98 --------KKILE-AKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESE----- 162 (347)
T ss_dssp --------EEEEE-ESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTT-----
T ss_pred --------EEEEc-CCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCC-----
Confidence 11111 123 8899999999966663 22 46889998776
Q ss_pred ccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEeccCC-------eEEEEeccCCeeEEEeecCccceEEEE
Q 021160 129 LSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCG-------HLFIWKKKGGKLVRLMVGDRHVVNQLE 201 (316)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg-------~v~~wd~~~~~~~~~~~~~~~~v~~~~ 201 (316)
+....+.. . . +..++| +|+| +++++..++ ...+|.+.+++.. .+..+ ..+..+
T Consensus 163 -----------~~~~~l~~-~-~--~~~~~~-spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~l~~~-~~~~~~- 222 (347)
T 2gop_A 163 -----------EVIEEFEK-P-R--FSSGIW-HRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKEE-KMFEK-VSFYAV- 222 (347)
T ss_dssp -----------EEEEEEEE-E-T--TCEEEE-ETTE-EEEEEECCCSSCCSSCCEEEEEEETTEEE-EEEEE-ESEEEE-
T ss_pred -----------eEEeeecC-C-C--cccccC-CCCe-EEEEEecccccccccccccEEEeCCCceE-EeccC-cceeeE-
Confidence 33244443 2 3 788898 8999 777775542 3344444456543 44334 455444
Q ss_pred EcCCCCeEEEEeCC--------CcEEEecCCCCCCCCC-CCCcccceeeeecCCCCceeEEecCCCeEEEEEeccc
Q 021160 202 PHPHIPMFATCGIE--------KTVKLWAPMPTDFPPL-PDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR 268 (316)
Q Consensus 202 ~~p~~~~l~s~~~d--------~~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~ 268 (316)
+|+|+.|+.++.+ ..|.+|| +++...+ ..+...+.....|+ ++ ++++++.++..++| +.++
T Consensus 223 -spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g 292 (347)
T 2gop_A 223 -DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDG 292 (347)
T ss_dssp -EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESS
T ss_pred -CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCC
Confidence 9999998877644 3688888 4443323 33344444424466 77 88888999999999 8743
No 174
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.58 E-value=1.7e-14 Score=122.40 Aligned_cols=230 Identities=10% Similarity=0.027 Sum_probs=142.8
Q ss_pred ceEEEEECCCCCcEEEEEec-C--CcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEE-ec
Q 021160 36 RLNAIVIDPRNPNYFAVGGS-D--EYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLIS-YN 111 (316)
Q Consensus 36 ~v~~~~~~~~~~~~l~~g~~-d--g~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s-~~ 111 (316)
.+..++|+|+| ++|+.... + ..|.+||+.+++.. .+...+......+.|+|+|+.|+. +.
T Consensus 37 ~~~~~~~SpdG-~~l~~~~~~~g~~~l~~~d~~~~~~~---------------~l~~~~~~~~~~~~~spdg~~l~~~~~ 100 (396)
T 3c5m_A 37 YFYQKCFTQDG-KKLLFAGDFDGNRNYYLLNLETQQAV---------------QLTEGKGDNTFGGFISTDERAFFYVKN 100 (396)
T ss_dssp CTTSCCBCTTS-CEEEEEECTTSSCEEEEEETTTTEEE---------------ECCCSSCBCTTTCEECTTSSEEEEEET
T ss_pred eeecCcCCCCC-CEEEEEEecCCCceEEEEECCCCcEE---------------EeecCCCCccccceECCCCCEEEEEEc
Confidence 36788999999 66665543 2 46888898877521 111222222233689999997766 56
Q ss_pred CCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeee-------------------EEEecCCCcEEEEe--
Q 021160 112 DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKG-------------------VNFFGPNDEYVMSG-- 170 (316)
Q Consensus 112 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-------------------~~~~~~~~~~l~~~-- 170 (316)
++.|++||+.++ +.......+... ... +.| +|+++.++..
T Consensus 101 ~~~l~~~d~~~~----------------~~~~~~~~~~~~--~~~g~~l~~~~~~~~~~~~~~~~~~-spdg~~~~~~~~ 161 (396)
T 3c5m_A 101 ELNLMKVDLETL----------------EEQVIYTVDEEW--KGYGTWVANSDCTKLVGIEILKRDW-QPLTSWEKFAEF 161 (396)
T ss_dssp TTEEEEEETTTC----------------CEEEEEECCTTE--EEEEEEEECTTSSEEEEEEEEGGGC-CCCCSHHHHHHH
T ss_pred CCcEEEEECCCC----------------CcEEEEeccccc--CCCCCEEEeccCCcccccccccccc-CCCCcceeeeee
Confidence 778999999876 333333322211 111 244 7777776654
Q ss_pred ---ccCCeEEEEeccCCeeEEEeecCccceEEEEEcC-CCCeEEEEeCC------CcEEEecCCCCCCCCCCCCc-ccce
Q 021160 171 ---SDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHP-HIPMFATCGIE------KTVKLWAPMPTDFPPLPDNA-EKIM 239 (316)
Q Consensus 171 ---~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p-~~~~l~s~~~d------~~i~iwd~~~~~~~~~~~~~-~~~~ 239 (316)
..+..|++||+.+++..... .+...+..+.|+| ++..|+..+.+ ..|.+|++.++....+..+. ....
T Consensus 162 ~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~ 240 (396)
T 3c5m_A 162 YHTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESC 240 (396)
T ss_dssp HHTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEE
T ss_pred ccCCCcceEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccc
Confidence 35678999999988765444 4566789999999 78776665543 46889998776644444332 2223
Q ss_pred eeeecCCCCceeEEecCC-----CeEEEEEecccCccee-------EEeec-cccccccc----------------CCCC
Q 021160 240 KANKQGREDHSRITLTPD-----VIMHVLRLQRRQTLAY-------RERRY-NAADFESD----------------EEEG 290 (316)
Q Consensus 240 ~~~~~~~~~~~~~s~~~d-----~~~~~w~~~~~~~~~~-------~~~~~-~~~~~~~~----------------~~~~ 290 (316)
....|+++++.++..+.+ +.+.+|++.+++.... ..+.+ ++..+... ....
T Consensus 241 ~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~ 320 (396)
T 3c5m_A 241 THEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPPCSHLMSNFDGSLMVGDGCDAPVDVADADSYNIENDP 320 (396)
T ss_dssp EEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCSEEEEEECSSSSEEEEEECCC----------CCCCCC
T ss_pred cceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCCCCCCccCCCCceEEEecCCcceeeccccccccCCCC
Confidence 334488888877665443 5599999876643222 13455 55555432 1335
Q ss_pred eEEEEeccCCC
Q 021160 291 ETYLLGFSDSD 301 (316)
Q Consensus 291 ~v~~~~~~~~~ 301 (316)
.+++++...+.
T Consensus 321 ~i~~~d~~~~~ 331 (396)
T 3c5m_A 321 FLYVLNTKAKS 331 (396)
T ss_dssp EEEEEETTTTB
T ss_pred cEEEEecccCc
Confidence 68888876553
No 175
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.58 E-value=4.8e-13 Score=109.09 Aligned_cols=207 Identities=11% Similarity=0.059 Sum_probs=134.2
Q ss_pred eeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceec
Q 021160 3 LFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTF 82 (316)
Q Consensus 3 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~ 82 (316)
|.|..||..+. ...+.. +...+.+++++|++ +++++...++.|.+||..+++... +
T Consensus 50 ~~i~~~~~~~~--~~~~~~-----------~~~~~~~l~~~~dg-~l~v~~~~~~~i~~~d~~~g~~~~----------~ 105 (296)
T 3e5z_A 50 NRTWAWSDDGQ--LSPEMH-----------PSHHQNGHCLNKQG-HLIACSHGLRRLERQREPGGEWES----------I 105 (296)
T ss_dssp TEEEEEETTSC--EEEEES-----------SCSSEEEEEECTTC-CEEEEETTTTEEEEECSTTCCEEE----------E
T ss_pred CEEEEEECCCC--eEEEEC-----------CCCCcceeeECCCC-cEEEEecCCCeEEEEcCCCCcEEE----------E
Confidence 56777887654 233322 34568999999998 777777667899999997776211 0
Q ss_pred ccccccCCCcccEEEEEEccCCCeEEEe----c--------------CCcEEEEEcCCCCCCCCccCCccccccCCCcce
Q 021160 83 CPRHLIGKNNIHITGLAYSNTSELLISY----N--------------DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQV 144 (316)
Q Consensus 83 ~~~~~~~~~~~~i~~~~~~~~~~~l~s~----~--------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (316)
.. .........+..++++|+|+++++. . .+.|..++.. + ....
T Consensus 106 ~~-~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g-----------------~~~~ 166 (296)
T 3e5z_A 106 AD-SFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-G-----------------TLSA 166 (296)
T ss_dssp EC-EETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-S-----------------CEEE
T ss_pred ee-ccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-C-----------------CEEE
Confidence 00 0001112345679999999988862 1 2355555544 3 2233
Q ss_pred eeCCcCCceeeeEEEecCCCcEEEEeccCCeEEEEecc-CCee---EEEeecCccceEEEEEcCCCCeEEEEeCCCcEEE
Q 021160 145 YSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKK-GGKL---VRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKL 220 (316)
Q Consensus 145 ~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~-~~~~---~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~i 220 (316)
+..+... ...++| +|+++.+++.+.++.|++|++. +++. ...+..+...+..++++++|+++++. ++.|.+
T Consensus 167 ~~~~~~~--~~gi~~-s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~ 241 (296)
T 3e5z_A 167 PIRDRVK--PNGLAF-LPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHV 241 (296)
T ss_dssp EECCCSS--EEEEEE-CTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEE
T ss_pred eecCCCC--CccEEE-CCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEE
Confidence 4444433 788998 9999988888888999999986 5554 23333345567789999999876666 789999
Q ss_pred ecCCCCCCCCCCCCcccceeeeecCCCCceeEEecCCC
Q 021160 221 WAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLTPDV 258 (316)
Q Consensus 221 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~ 258 (316)
|+.....+..+..+.. +..++.-.+++..+..++.++
T Consensus 242 ~~~~g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~ 278 (296)
T 3e5z_A 242 LTPDGDELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTE 278 (296)
T ss_dssp ECTTSCEEEEEECSSC-CCEEEEESTTSCEEEEEETTE
T ss_pred ECCCCCEEEEEECCCC-ceeEEEECCCCCEEEEEcCCe
Confidence 9997544444443333 444442256766666666664
No 176
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.58 E-value=6.8e-13 Score=106.56 Aligned_cols=198 Identities=9% Similarity=0.013 Sum_probs=136.8
Q ss_pred cceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEe-cCC
Q 021160 35 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-NDE 113 (316)
Q Consensus 35 ~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~ 113 (316)
..+.++++++++ +++++.. ++.|.+||...... ..........+..+++.++|+++++. .++
T Consensus 67 ~~p~~i~~~~~g-~l~v~~~-~~~i~~~d~~~~~~---------------~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~ 129 (270)
T 1rwi_B 67 YQPQGLAVDGAG-TVYVTDF-NNRVVTLAAGSNNQ---------------TVLPFDGLNYPEGLAVDTQGAVYVADRGNN 129 (270)
T ss_dssp CSCCCEEECTTC-CEEEEET-TTEEEEECTTCSCC---------------EECCCCSCSSEEEEEECTTCCEEEEEGGGT
T ss_pred CCcceeEECCCC-CEEEEcC-CCEEEEEeCCCceE---------------eeeecCCcCCCcceEECCCCCEEEEECCCC
Confidence 467889999988 6666555 88999999875531 11111223467899999999977774 678
Q ss_pred cEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCeeEEEeecC
Q 021160 114 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGD 193 (316)
Q Consensus 114 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~ 193 (316)
.|.+|+..+. .......... ..+.++++ +++++++++...++.|.+|+............+
T Consensus 130 ~i~~~~~~~~----------------~~~~~~~~~~--~~p~~i~~-~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~ 190 (270)
T 1rwi_B 130 RVVKLAAGSK----------------TQTVLPFTGL--NDPDGVAV-DNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTD 190 (270)
T ss_dssp EEEEECTTCC----------------SCEECCCCSC--CSCCCEEE-CTTCCEEEEEGGGTEEEEECTTTCCEEECCCSS
T ss_pred EEEEEECCCc----------------eeEeeccccC--CCceeEEE-eCCCCEEEEECCCCEEEEEecCCCceEeecccC
Confidence 8999975443 1111111111 22788998 889988887777899999998876644333333
Q ss_pred ccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCCCCCCC-CCcccceeeeecCCCCceeEEecCCCeEEEEEecccC
Q 021160 194 RHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLP-DNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQ 269 (316)
Q Consensus 194 ~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~ 269 (316)
...+..+++++++.++++...++.|.+|+..+....... .+...+..++ +.++++++++...++.|+++++...+
T Consensus 191 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~-~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 191 ITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVA-VDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp CCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEE-ECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred CCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEE-ECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 367889999999987777777889999998776532222 1223333444 56778888898899999999877654
No 177
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.57 E-value=2.2e-12 Score=106.82 Aligned_cols=222 Identities=4% Similarity=-0.102 Sum_probs=150.1
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
.|.|.+||..+.+....+.. ......+++++++ .++++...++.|.+||..++++...+
T Consensus 63 ~~~v~viD~~t~~~~~~i~~------------~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~~~~~i-------- 121 (328)
T 3dsm_A 63 SHVIFAIDINTFKEVGRITG------------FTSPRYIHFLSDE-KAYVTQIWDYRIFIINPKTYEITGYI-------- 121 (328)
T ss_dssp GTEEEEEETTTCCEEEEEEC------------CSSEEEEEEEETT-EEEEEEBSCSEEEEEETTTTEEEEEE--------
T ss_pred CCEEEEEECcccEEEEEcCC------------CCCCcEEEEeCCC-eEEEEECCCCeEEEEECCCCeEEEEE--------
Confidence 46899999988776555531 2357899999888 66666658899999999988743211
Q ss_pred cccccccCCCcccEEEEEEccCCCeEEEe--cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEE
Q 021160 82 FCPRHLIGKNNIHITGLAYSNTSELLISY--NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNF 159 (316)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~~~~~~~l~s~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 159 (316)
.... ..+.......+++ .+++++++. .++.|.++|+.++ +....+..... ...+++
T Consensus 122 -~~g~-~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~----------------~~~~~i~~g~~---p~~i~~ 179 (328)
T 3dsm_A 122 -ECPD-MDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETD----------------KVVDELTIGIQ---PTSLVM 179 (328)
T ss_dssp -ECTT-CCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTT----------------EEEEEEECSSC---BCCCEE
T ss_pred -EcCC-ccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCC----------------eEEEEEEcCCC---ccceEE
Confidence 0000 0011113345666 455566664 3889999999887 45555554322 567888
Q ss_pred ecCCCcEEEEeccC----------CeEEEEeccCCeeEEEeecC-ccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCCC
Q 021160 160 FGPNDEYVMSGSDC----------GHLFIWKKKGGKLVRLMVGD-RHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF 228 (316)
Q Consensus 160 ~~~~~~~l~~~~~d----------g~v~~wd~~~~~~~~~~~~~-~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~~ 228 (316)
+++|++++++..+ +.|.++|..+++....+... ...+..++|+|+++.|..+.. .|.+||+.++++
T Consensus 180 -~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~ 256 (328)
T 3dsm_A 180 -DKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRV 256 (328)
T ss_dssp -CTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSC
T ss_pred -cCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCce
Confidence 8999987777654 79999999999988776532 236789999999998877654 899999988774
Q ss_pred CCC---CCCcccceeeeecCC-CCceeEEe----cCCCeEEEEEecccCcc
Q 021160 229 PPL---PDNAEKIMKANKQGR-EDHSRITL----TPDVIMHVLRLQRRQTL 271 (316)
Q Consensus 229 ~~~---~~~~~~~~~~~~~~~-~~~~~~s~----~~d~~~~~w~~~~~~~~ 271 (316)
... .........++ ..+ ++.+.++. ..++.|.+|+.. ++..
T Consensus 257 ~~~~~~~~~~~~p~gi~-vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~ 305 (328)
T 3dsm_A 257 PVRPFLEFRDTKYYGLT-VNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLI 305 (328)
T ss_dssp CSSCSBCCCSSCEEEEE-ECTTTCCEEEEECTTSSSEEEEEEECTT-CCEE
T ss_pred eeeeeecCCCCceEEEE-EcCCCCeEEEEcccccccCCEEEEECCC-CCEE
Confidence 321 11122333444 555 67778887 678999999977 5433
No 178
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.57 E-value=1.2e-13 Score=115.98 Aligned_cols=224 Identities=8% Similarity=-0.011 Sum_probs=129.8
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEe----------cCCcEEEEeCcCCcccC
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGG----------SDEYARVYDIRKCHWYS 71 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~----------~dg~v~~wd~~~~~~~~ 71 (316)
++.|.+||..+.+....+.. +..+ .++|+|++ ++++++. .++.|.+||..+.+...
T Consensus 30 d~~v~v~D~~t~~~~~~i~~-----------g~~p--~i~~spdg-~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~ 95 (361)
T 2oiz_A 30 ESRVHVYDYTNGKFLGMVPT-----------AFNG--HVQVSNDG-KKIYTMTTYHERITRGKRSDVVEVWDADKLTFEK 95 (361)
T ss_dssp GCEEEEEETTTCCEEEEEEC-----------CEEE--EEEECTTS-SEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEE
T ss_pred cCeEEEEECCCCeEEEEecC-----------CCCC--ceEECCCC-CEEEEEEecccccccCCCCCEEEEEECcCCcEEE
Confidence 56899999887765444332 2334 89999999 6777765 36779999998776322
Q ss_pred CCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEe--c-CCcEEEEEcCCCCCCCCccCCccccccCCCcce-eeC
Q 021160 72 PISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY--N-DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQV-YSG 147 (316)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~--~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 147 (316)
.+ ....-...+......++++|+|++|+.+ . ++.|.+||+.++. .+.. +..
T Consensus 96 ~i---------~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~----------------~~~~~i~~ 150 (361)
T 2oiz_A 96 EI---------SLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGD----------------YVEDVTAA 150 (361)
T ss_dssp EE---------EECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTE----------------EEEEEGGG
T ss_pred EE---------EcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCc----------------EEEEEecC
Confidence 11 1000000012345578999999977664 3 6889999998762 2222 110
Q ss_pred CcC------------------CceeeeEEE---------------ec-----------CCCcEEEEeccCCeEEEEeccC
Q 021160 148 HRN------------------SQTVKGVNF---------------FG-----------PNDEYVMSGSDCGHLFIWKKKG 183 (316)
Q Consensus 148 ~~~------------------~~~i~~~~~---------------~~-----------~~~~~l~~~~~dg~v~~wd~~~ 183 (316)
... ...+..+.+ +. +++..++..+.++.+.++|+..
T Consensus 151 ~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~ 230 (361)
T 2oiz_A 151 AGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSG 230 (361)
T ss_dssp TTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSS
T ss_pred CCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecC
Confidence 000 000111111 00 1122334444556666777654
Q ss_pred Cee--EEEeecC----------ccceEEEEEcCCCCeEEEEeC-----------CCcEEEecCCCCC-CCCCCCCcccce
Q 021160 184 GKL--VRLMVGD----------RHVVNQLEPHPHIPMFATCGI-----------EKTVKLWAPMPTD-FPPLPDNAEKIM 239 (316)
Q Consensus 184 ~~~--~~~~~~~----------~~~v~~~~~~p~~~~l~s~~~-----------d~~i~iwd~~~~~-~~~~~~~~~~~~ 239 (316)
.+. ...+... ......++|+|+++.+..+.. .+.|.+||+.+.+ +.++..+. ..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~ 308 (361)
T 2oiz_A 231 DEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--AL 308 (361)
T ss_dssp SSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CC
T ss_pred CCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--ee
Confidence 321 1111100 011123789999887655432 3479999999887 55555444 44
Q ss_pred eeeecCCCCceeEEecCCCeEEEEEeccc
Q 021160 240 KANKQGREDHSRITLTPDVIMHVLRLQRR 268 (316)
Q Consensus 240 ~~~~~~~~~~~~~s~~~d~~~~~w~~~~~ 268 (316)
.++ ++++++++++... +.|.+||..++
T Consensus 309 ~ia-~spdg~~l~v~n~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 309 SMT-IDQQRNLMLTLDG-GNVNVYDISQP 335 (361)
T ss_dssp EEE-EETTTTEEEEECS-SCEEEEECSSS
T ss_pred EEE-ECCCCCEEEEeCC-CeEEEEECCCC
Confidence 554 7888888887776 99999998887
No 179
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.56 E-value=3.1e-14 Score=120.73 Aligned_cols=192 Identities=8% Similarity=-0.028 Sum_probs=123.2
Q ss_pred EEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEE-------------------EE
Q 021160 39 AIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITG-------------------LA 99 (316)
Q Consensus 39 ~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-------------------~~ 99 (316)
.+.|+|++ ++|+.++.++.|.+||+.+++..... ..+...... +.
T Consensus 85 ~~~~spdg-~~l~~~~~~~~l~~~d~~~~~~~~~~---------------~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~ 148 (396)
T 3c5m_A 85 GGFISTDE-RAFFYVKNELNLMKVDLETLEEQVIY---------------TVDEEWKGYGTWVANSDCTKLVGIEILKRD 148 (396)
T ss_dssp TCEECTTS-SEEEEEETTTEEEEEETTTCCEEEEE---------------ECCTTEEEEEEEEECTTSSEEEEEEEEGGG
T ss_pred cceECCCC-CEEEEEEcCCcEEEEECCCCCcEEEE---------------ecccccCCCCCEEEeccCCccccccccccc
Confidence 47899999 88988888889999999877522110 111111111 35
Q ss_pred EccCCCeEEE------ecCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecC-CCcEEEEecc
Q 021160 100 YSNTSELLIS------YNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGP-NDEYVMSGSD 172 (316)
Q Consensus 100 ~~~~~~~l~s------~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~ 172 (316)
|+|+++.++. ..+..|++||+.++ +.. .+..+... +..+.| +| ++..|+..+.
T Consensus 149 ~spdg~~~~~~~~~~~~~~~~l~~~d~~~g----------------~~~-~~~~~~~~--~~~~~~-sp~dg~~l~~~~~ 208 (396)
T 3c5m_A 149 WQPLTSWEKFAEFYHTNPTCRLIKVDIETG----------------ELE-VIHQDTAW--LGHPIY-RPFDDSTVGFCHE 208 (396)
T ss_dssp CCCCCSHHHHHHHHHTCCCEEEEEEETTTC----------------CEE-EEEEESSC--EEEEEE-ETTEEEEEEEEEC
T ss_pred cCCCCcceeeeeeccCCCcceEEEEECCCC----------------cEE-eeccCCcc--cccceE-CCCCCCEEEEEec
Confidence 6788875443 24567999999876 333 33333433 888998 88 7887776654
Q ss_pred C------CeEEEEeccCCeeEEEeecC--ccceEEEEEcCCCCeEEEEeCC-----CcEEEecCCCCCCCCCCCCcccce
Q 021160 173 C------GHLFIWKKKGGKLVRLMVGD--RHVVNQLEPHPHIPMFATCGIE-----KTVKLWAPMPTDFPPLPDNAEKIM 239 (316)
Q Consensus 173 d------g~v~~wd~~~~~~~~~~~~~--~~~v~~~~~~p~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~ 239 (316)
+ ..|++|++..++.. .+..+ ...+..++|+|+++.|+.++.+ +.|++||+.+++...+..... .
T Consensus 209 ~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~--~ 285 (396)
T 3c5m_A 209 GPHDLVDARMWLVNEDGSNVR-KIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPP--C 285 (396)
T ss_dssp SCSSSCSCCCEEEETTSCCCE-ESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCS--E
T ss_pred CCCCCCCceEEEEECCCCcee-EeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCC--C
Confidence 3 46888998766533 33333 2357889999999987776544 449999998876332221111 1
Q ss_pred eeeecCC-CCceeEEec----------------CCCeEEEEEecccCc
Q 021160 240 KANKQGR-EDHSRITLT----------------PDVIMHVLRLQRRQT 270 (316)
Q Consensus 240 ~~~~~~~-~~~~~~s~~----------------~d~~~~~w~~~~~~~ 270 (316)
. ..+++ ++++++..+ .+..+.+|++.+++.
T Consensus 286 ~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~ 332 (396)
T 3c5m_A 286 S-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA 332 (396)
T ss_dssp E-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBC
T ss_pred C-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCce
Confidence 2 34666 888777643 347899999876543
No 180
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.55 E-value=5.4e-12 Score=104.57 Aligned_cols=198 Identities=9% Similarity=0.109 Sum_probs=132.7
Q ss_pred CccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEe-c
Q 021160 33 NSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-N 111 (316)
Q Consensus 33 h~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~ 111 (316)
+...+.+++|+|++ ++++++..++.|.+||..+++.. .+...+...+.+++++++|+++++. .
T Consensus 43 ~~~~~~~~~~~~~g-~l~~~~~~~~~i~~~d~~~~~~~---------------~~~~~~~~~~~~i~~~~dg~l~v~~~~ 106 (333)
T 2dg1_A 43 KGLQLEGLNFDRQG-QLFLLDVFEGNIFKINPETKEIK---------------RPFVSHKANPAAIKIHKDGRLFVCYLG 106 (333)
T ss_dssp SCCCEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEE---------------EEEECSSSSEEEEEECTTSCEEEEECT
T ss_pred cCccccCcEECCCC-CEEEEECCCCEEEEEeCCCCcEE---------------EEeeCCCCCcceEEECCCCcEEEEeCC
Confidence 34567899999998 77788888999999999877521 1111234679999999999987775 3
Q ss_pred C----CcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEecc------CCeEEEEec
Q 021160 112 D----ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSD------CGHLFIWKK 181 (316)
Q Consensus 112 d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~------dg~v~~wd~ 181 (316)
+ +.|.+||..++ .....+........+.++++ +|++.++++... .+.|+.++.
T Consensus 107 ~~~~~~~i~~~d~~~~----------------~~~~~~~~~~~~~~~~~i~~-d~~g~l~v~~~~~~~~~~~~~l~~~~~ 169 (333)
T 2dg1_A 107 DFKSTGGIFAATENGD----------------NLQDIIEDLSTAYCIDDMVF-DSKGGFYFTDFRGYSTNPLGGVYYVSP 169 (333)
T ss_dssp TSSSCCEEEEECTTSC----------------SCEEEECSSSSCCCEEEEEE-CTTSCEEEEECCCBTTBCCEEEEEECT
T ss_pred CCCCCceEEEEeCCCC----------------EEEEEEccCccCCcccceEE-CCCCCEEEEeccccccCCCceEEEEeC
Confidence 4 58999998776 22222221111133889998 899988777654 356777777
Q ss_pred cCCeeEEEeecCccceEEEEEcCCCCeE-EEEeCCCcEEEecCCC-CC-CCC--------CCCCcccceeeeecCCCCce
Q 021160 182 KGGKLVRLMVGDRHVVNQLEPHPHIPMF-ATCGIEKTVKLWAPMP-TD-FPP--------LPDNAEKIMKANKQGREDHS 250 (316)
Q Consensus 182 ~~~~~~~~~~~~~~~v~~~~~~p~~~~l-~s~~~d~~i~iwd~~~-~~-~~~--------~~~~~~~~~~~~~~~~~~~~ 250 (316)
.+++... +..+...+..++|+|+++.+ ++.+.++.|.+|++.. +. ... +.++ ..+ ....+.+++++
T Consensus 170 ~~~~~~~-~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~-~~i~~d~~G~l 246 (333)
T 2dg1_A 170 DFRTVTP-IIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGP-DSCCIDSDDNL 246 (333)
T ss_dssp TSCCEEE-EEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEE-EEEEEBTTCCE
T ss_pred CCCEEEE-eecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCC-CceEECCCCCE
Confidence 6555433 32233457889999999865 4555678999999864 22 111 1111 122 22335667888
Q ss_pred eEEecCCCeEEEEEec
Q 021160 251 RITLTPDVIMHVLRLQ 266 (316)
Q Consensus 251 ~~s~~~d~~~~~w~~~ 266 (316)
.++...++.|.+|+..
T Consensus 247 ~v~~~~~~~v~~~d~~ 262 (333)
T 2dg1_A 247 YVAMYGQGRVLVFNKR 262 (333)
T ss_dssp EEEEETTTEEEEECTT
T ss_pred EEEEcCCCEEEEECCC
Confidence 8888788899999874
No 181
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.55 E-value=1.7e-12 Score=104.24 Aligned_cols=197 Identities=8% Similarity=-0.031 Sum_probs=132.7
Q ss_pred ceEEEEECCCCCcEEE-EEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEecCCc
Q 021160 36 RLNAIVIDPRNPNYFA-VGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDEL 114 (316)
Q Consensus 36 ~v~~~~~~~~~~~~l~-~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d~~ 114 (316)
...++++++++ ++++ +...++.|.+|+..+.... .....+...+.++++.++|+++++..++.
T Consensus 25 ~p~~i~~~~~g-~l~v~~~~~~~~i~~~~~~~~~~~---------------~~~~~~~~~p~~i~~~~~g~l~v~~~~~~ 88 (270)
T 1rwi_B 25 SPSGVAVDSAG-NVYVTSEGMYGRVVKLATGSTGTT---------------VLPFNGLYQPQGLAVDGAGTVYVTDFNNR 88 (270)
T ss_dssp CEEEEEECTTC-CEEEEECSSSCEEEEECC-----E---------------ECCCCSCCSCCCEEECTTCCEEEEETTTE
T ss_pred CccceEECCCC-CEEEEccCCCCcEEEecCCCcccc---------------eEeeCCcCCcceeEECCCCCEEEEcCCCE
Confidence 67899999998 6776 5477899999997654310 01012234567899999999777755889
Q ss_pred EEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCeeEEEeecCc
Q 021160 115 VYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR 194 (316)
Q Consensus 115 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~~ 194 (316)
|.+||.... ....+.... ...+..+++ ++++.++++...++.|.+|+..+...........
T Consensus 89 i~~~d~~~~-----------------~~~~~~~~~-~~~p~~i~~-~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~ 149 (270)
T 1rwi_B 89 VVTLAAGSN-----------------NQTVLPFDG-LNYPEGLAV-DTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGL 149 (270)
T ss_dssp EEEECTTCS-----------------CCEECCCCS-CSSEEEEEE-CTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSC
T ss_pred EEEEeCCCc-----------------eEeeeecCC-cCCCcceEE-CCCCCEEEEECCCCEEEEEECCCceeEeeccccC
Confidence 999998764 222222111 123789998 8899988887788999999866554333222333
Q ss_pred cceEEEEEcCCCCeEEEEeCCCcEEEecCCCCCCCCC-CCCcccceeeeecCCCCceeEEecCCCeEEEEEeccc
Q 021160 195 HVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPL-PDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR 268 (316)
Q Consensus 195 ~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~ 268 (316)
..+..++++|+++++++...++.|.+|+......... ......+..++ ..+++.+.++...++.|.+|+....
T Consensus 150 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~-~d~~g~l~v~~~~~~~v~~~~~~~~ 223 (270)
T 1rwi_B 150 NDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIA-VDEAGTVYVTEHNTNQVVKLLAGST 223 (270)
T ss_dssp CSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEE-ECTTCCEEEEETTTSCEEEECTTCS
T ss_pred CCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEE-ECCCCCEEEEECCCCcEEEEcCCCC
Confidence 4678899999999877777788999999887652221 12223333444 5667788888888899999987654
No 182
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.53 E-value=2.4e-12 Score=117.68 Aligned_cols=235 Identities=10% Similarity=0.084 Sum_probs=146.3
Q ss_pred CCccceEEEEECCCCCcEEEEEecCC-----cEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCe
Q 021160 32 MNSIRLNAIVIDPRNPNYFAVGGSDE-----YARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSEL 106 (316)
Q Consensus 32 gh~~~v~~~~~~~~~~~~l~~g~~dg-----~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 106 (316)
+|...+..++|+|+| ++||.+..++ .|++||+.+++.. ..... ...+..++|+|||+.
T Consensus 122 ~~~~~~~~~~~SPDg-~~la~~~~~~G~~~~~i~v~d~~tg~~~--------------~~~~~--~~~~~~~~wspDg~~ 184 (710)
T 2xdw_A 122 DGTVALRGYAFSEDG-EYFAYGLSASGSDWVTIKFMKVDGAKEL--------------PDVLE--RVKFSCMAWTHDGKG 184 (710)
T ss_dssp TSCEEEEEEEECTTS-SEEEEEEEETTCSCEEEEEEETTTTEEE--------------EEEEE--EECSCCEEECTTSSE
T ss_pred CCCEEEEEEEECCCC-CEEEEEEcCCCCceEEEEEEECCCCCCC--------------ccccc--CcccceEEEEeCCCE
Confidence 355578899999999 7777665433 8999999988731 11101 122567999999986
Q ss_pred EEE-ecCCc----------------EEEEEcCCCCCCCCccCCccccccCCC--cceeeCCcCCceeeeEEEecCCCcEE
Q 021160 107 LIS-YNDEL----------------VYLFEKNMGLGPSPLSLSPEDLQKREE--PQVYSGHRNSQTVKGVNFFGPNDEYV 167 (316)
Q Consensus 107 l~s-~~d~~----------------i~iwd~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~l 167 (316)
|+. ..++. |++|++.++ .. ...+........+..+.| +|+|++|
T Consensus 185 l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~----------------~~~~~~v~~~~~~~~~~~~~~~-SpDg~~l 247 (710)
T 2xdw_A 185 MFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTD----------------QSEDILCAEFPDEPKWMGGAEL-SDDGRYV 247 (710)
T ss_dssp EEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSC----------------GGGCEEEECCTTCTTCEEEEEE-CTTSCEE
T ss_pred EEEEEECCccccccccccccCCCCEEEEEECCCC----------------cccceEEeccCCCCeEEEEEEE-cCCCCEE
Confidence 655 45544 999999776 21 122233222223778888 9999999
Q ss_pred EEecc-----CCeEEEEeccC------Ce-eEEEeecCccceEEEEEcCCCCeEEEEeCC----CcEEEecCCCCC---C
Q 021160 168 MSGSD-----CGHLFIWKKKG------GK-LVRLMVGDRHVVNQLEPHPHIPMFATCGIE----KTVKLWAPMPTD---F 228 (316)
Q Consensus 168 ~~~~~-----dg~v~~wd~~~------~~-~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d----~~i~iwd~~~~~---~ 228 (316)
+..+. +..|++||+.+ ++ ....+..+...+.. .|+|++..|+..+.+ +.|.+|++.+.. .
T Consensus 248 ~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~ 326 (710)
T 2xdw_A 248 LLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKW 326 (710)
T ss_dssp EEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGC
T ss_pred EEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccc
Confidence 88765 67899999986 53 35566666665554 488999887655543 369999988763 2
Q ss_pred CCCCCCcc-cceeeeecCCCCceeEEecCCCeEEE--EEecccCcceeE----------Eeeccccccc----ccCCCCe
Q 021160 229 PPLPDNAE-KIMKANKQGREDHSRITLTPDVIMHV--LRLQRRQTLAYR----------ERRYNAADFE----SDEEEGE 291 (316)
Q Consensus 229 ~~~~~~~~-~~~~~~~~~~~~~~~~s~~~d~~~~~--w~~~~~~~~~~~----------~~~~~~~~~~----~~~~~~~ 291 (316)
..+..+.. ..+....+.+++.++++...++..++ |++.+++..... ..+++...+. +....++
T Consensus 327 ~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~ 406 (710)
T 2xdw_A 327 KVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGI 406 (710)
T ss_dssp EEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCE
T ss_pred eeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCE
Confidence 33433433 23333334556778888888876554 554343321111 2233333332 3345667
Q ss_pred EEEEeccCCC
Q 021160 292 TYLLGFSDSD 301 (316)
Q Consensus 292 v~~~~~~~~~ 301 (316)
+|.+|+..++
T Consensus 407 i~~~d~~tg~ 416 (710)
T 2xdw_A 407 IYHCDLTKEE 416 (710)
T ss_dssp EEEEETTSSS
T ss_pred EEEEECCCCc
Confidence 8888886654
No 183
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.53 E-value=2.1e-12 Score=117.74 Aligned_cols=200 Identities=9% Similarity=0.077 Sum_probs=127.7
Q ss_pred CCccceEEEEECCCCCcEEEE-----EecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCe
Q 021160 32 MNSIRLNAIVIDPRNPNYFAV-----GGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSEL 106 (316)
Q Consensus 32 gh~~~v~~~~~~~~~~~~l~~-----g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 106 (316)
+|...+.+++|+|+| ++||. |+.+..|++||+.+++... ...+ ... ....++|+|+|+.
T Consensus 118 ~~~~~~~~~~~SPDG-~~la~~~~~~G~~~~~i~v~dl~tg~~~~------------~~~~-~~~--~~~~~~wspDg~~ 181 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDG-KKVAFAQKPNAADEAVLHVIDVDSGEWSK------------VDVI-EGG--KYATPKWTPDSKG 181 (695)
T ss_dssp SSCEEEEEEEECTTS-SEEEEEEEETTCSCCEEEEEETTTCCBCS------------SCCB-SCC--TTCCCEECTTSSE
T ss_pred CCCEEEEEEEECCCC-CEEEEEECCCCCceEEEEEEECCCCCCcC------------Cccc-Ccc--cccceEEecCCCE
Confidence 466679999999999 77773 3445689999999887310 0011 111 1157899999996
Q ss_pred EEE-ecCCc-------------EEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEecc
Q 021160 107 LIS-YNDEL-------------VYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSD 172 (316)
Q Consensus 107 l~s-~~d~~-------------i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~ 172 (316)
|+. ..|.. |++|++.++.. .....+........+.++.| +|+|++|+..+.
T Consensus 182 l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~--------------~~~lv~~~~~~~~~~~~~~~-SpDG~~l~~~~~ 246 (695)
T 2bkl_A 182 FYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPS--------------KDTVVHERTGDPTTFLQSDL-SRDGKYLFVYIL 246 (695)
T ss_dssp EEEEECCCCTTSCGGGGGGGCEEEEEETTSCGG--------------GCEEEECCCCCTTCEEEEEE-CTTSCCEEEEEE
T ss_pred EEEEEecCCCCCccccCCCCCEEEEEECCCCch--------------hceEEEecCCCCEEEEEEEE-CCCCCEEEEEEe
Confidence 666 45554 99999987610 01122232222123788998 999999988876
Q ss_pred CC----eEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEe---CCCcEEEecCCCCCC---CCCCCCc-cc-cee
Q 021160 173 CG----HLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCG---IEKTVKLWAPMPTDF---PPLPDNA-EK-IMK 240 (316)
Q Consensus 173 dg----~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~---~d~~i~iwd~~~~~~---~~~~~~~-~~-~~~ 240 (316)
++ .|++++..+++ ...+..+...+....+ |++.+++... .++.|.+||+.++.. ..+..+. .. +..
T Consensus 247 ~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~ 324 (695)
T 2bkl_A 247 RGWSENDVYWKRPGEKD-FRLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLS 324 (695)
T ss_dssp ETTTEEEEEEECTTCSS-CEEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEE
T ss_pred CCCCceEEEEEcCCCCc-eEEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEE
Confidence 66 77788766555 3445455556666667 4555544444 257899999977642 3333232 22 322
Q ss_pred eeecCCCCceeEEecCCCeEEEEEec
Q 021160 241 ANKQGREDHSRITLTPDVIMHVLRLQ 266 (316)
Q Consensus 241 ~~~~~~~~~~~~s~~~d~~~~~w~~~ 266 (316)
.. +. ++.++++...|+..++|.+.
T Consensus 325 ~~-~~-~~~lv~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 325 VS-IV-GGHLSLEYLKDATSEVRVAT 348 (695)
T ss_dssp EE-EE-TTEEEEEEEETTEEEEEEEE
T ss_pred EE-EE-CCEEEEEEEECCEEEEEEEe
Confidence 33 33 66788889999998988765
No 184
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.51 E-value=2.6e-12 Score=103.52 Aligned_cols=185 Identities=8% Similarity=0.009 Sum_probs=134.0
Q ss_pred cEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCc-ccEEEEEEccCCCeEEEecCCcEEEEEcCCCCCC
Q 021160 48 NYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNN-IHITGLAYSNTSELLISYNDELVYLFEKNMGLGP 126 (316)
Q Consensus 48 ~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~ 126 (316)
++|++++.++.|.+||.++++.. ..+ ..+. ..+.++.+.|+|++++ +.++.|+.||. ++
T Consensus 6 ~~lv~~~~~~~v~~~d~~tG~~~--------------w~~-~~~~~~~~~~~~~~pdG~ilv-s~~~~V~~~d~-~G--- 65 (276)
T 3no2_A 6 HLLVGGSGWNKIAIINKDTKEIV--------------WEY-PLEKGWECNSVAATKAGEILF-SYSKGAKMITR-DG--- 65 (276)
T ss_dssp EEEEECTTCSEEEEEETTTTEEE--------------EEE-ECCTTCCCCEEEECTTSCEEE-ECBSEEEEECT-TS---
T ss_pred cEEEeeCCCCEEEEEECCCCeEE--------------EEe-CCCccCCCcCeEECCCCCEEE-eCCCCEEEECC-CC---
Confidence 68999999999999999888732 222 1222 3577889999999888 45778999998 56
Q ss_pred CCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEecc-CCeEEEEeccCCeeEEEeec------CccceEE
Q 021160 127 SPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSD-CGHLFIWKKKGGKLVRLMVG------DRHVVNQ 199 (316)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-dg~v~~wd~~~~~~~~~~~~------~~~~v~~ 199 (316)
+.+..+..+.. ..+.++.+ .++|+++++.+. ++.+..++. +|+.+..+.. +......
T Consensus 66 -------------~~~W~~~~~~~-~~~~~~~~-~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~ 129 (276)
T 3no2_A 66 -------------RELWNIAAPAG-CEMQTARI-LPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQ 129 (276)
T ss_dssp -------------CEEEEEECCTT-CEEEEEEE-CTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSC
T ss_pred -------------CEEEEEcCCCC-ccccccEE-CCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccC
Confidence 56677765421 23788888 899999999887 888888886 6887766642 2224556
Q ss_pred EEEcCCCCeEEEEeCCCcEEEecCCCCCCCCCCCCcccceeeeecCCCCceeEEecCCCeEEEEEecccCc
Q 021160 200 LEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQT 270 (316)
Q Consensus 200 ~~~~p~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~~ 270 (316)
+++.++++++++...++.|..||.....+.++... ....... ..++++.+++...++.+..+|..+++.
T Consensus 130 v~~~~~G~~lv~~~~~~~v~~~d~~G~~~w~~~~~-~~~~~~~-~~~~g~~~v~~~~~~~v~~~d~~tG~~ 198 (276)
T 3no2_A 130 INKNKKGNYLVPLFATSEVREIAPNGQLLNSVKLS-GTPFSSA-FLDNGDCLVACGDAHCFVQLNLESNRI 198 (276)
T ss_dssp CEECTTSCEEEEETTTTEEEEECTTSCEEEEEECS-SCCCEEE-ECTTSCEEEECBTTSEEEEECTTTCCE
T ss_pred ceECCCCCEEEEecCCCEEEEECCCCCEEEEEECC-CCcccee-EcCCCCEEEEeCCCCeEEEEeCcCCcE
Confidence 77899999999999999999999983333333322 2222333 456788888888888888888776543
No 185
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.50 E-value=9.3e-13 Score=110.13 Aligned_cols=183 Identities=8% Similarity=0.015 Sum_probs=125.9
Q ss_pred ceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEecCCcE
Q 021160 36 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDELV 115 (316)
Q Consensus 36 ~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d~~i 115 (316)
.++.+++++.. .++++|+.++ +++|++....-... ..... +..... ..+.. |+.++| ++.+|+.+.++.|
T Consensus 39 ~~nlLais~~~-gll~a~~~~~-l~v~~~~~l~~~~~-~~~~~---~~~~~~-~~lp~-V~~l~f--d~~~L~v~~~~~l 108 (388)
T 1xip_A 39 SLQNLDISNSK-SLFVAASGSK-AVVGELQLLRDHIT-SDSTP---LTFKWE-KEIPD-VIFVCF--HGDQVLVSTRNAL 108 (388)
T ss_dssp CCBCEEEETTT-TEEEEEETTE-EEEEEHHHHHHHHH-SSSCC---CCCSEE-EECTT-EEEEEE--ETTEEEEEESSEE
T ss_pred cccEEEEcCCC-CEEEEeCCCE-EEEEEhhHhhhhhc-ccccc---ccceEE-eeCCC-eeEEEE--CCCEEEEEcCCcE
Confidence 68999999988 7888888874 66699764330000 00000 111111 22455 999999 8888888789999
Q ss_pred EEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCeeEEEeecCcc
Q 021160 116 YLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRH 195 (316)
Q Consensus 116 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~~~ 195 (316)
++||+.+. ........+... +.++.+..| .+++++.||.+.+||+.+++... +..
T Consensus 109 ~v~dv~sl----------------~~~~~~~~~~~~--v~~i~~~~p---~~av~~~dG~L~v~dl~~~~~~~----~~~ 163 (388)
T 1xip_A 109 YSLDLEEL----------------SEFRTVTSFEKP--VFQLKNVNN---TLVILNSVNDLSALDLRTKSTKQ----LAQ 163 (388)
T ss_dssp EEEESSST----------------TCEEEEEECSSC--EEEEEECSS---EEEEEETTSEEEEEETTTCCEEE----EEE
T ss_pred EEEEchhh----------------hccCccceeecc--eeeEEecCC---CEEEEECCCCEEEEEccCCcccc----ccC
Confidence 99999876 333444555544 778777433 28888999999999999887653 346
Q ss_pred ceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC---CCCCC---------CCcccceeeeecCCCCceeEEecC
Q 021160 196 VVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD---FPPLP---------DNAEKIMKANKQGREDHSRITLTP 256 (316)
Q Consensus 196 ~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~---~~~~~---------~~~~~~~~~~~~~~~~~~~~s~~~ 256 (316)
.|++++|||+| ++.|..||++++|++.... ..+++ +|...+..+. |..+..++++...
T Consensus 164 ~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~-wl~~~~flv~y~~ 233 (388)
T 1xip_A 164 NVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVT-ILSPQDFLAVFGN 233 (388)
T ss_dssp SEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEE-ESSSSEEEEEEEC
T ss_pred CceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEE-EecCCeEEEEEcC
Confidence 89999999999 6778889999999887765 22231 2455666666 5556677776443
No 186
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.50 E-value=1.8e-11 Score=101.35 Aligned_cols=178 Identities=8% Similarity=0.040 Sum_probs=117.2
Q ss_pred eeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecC----CcEEEEeCcCCcccCCCCCCCC
Q 021160 3 LFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSD----EYARVYDIRKCHWYSPISSDTP 78 (316)
Q Consensus 3 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~d----g~v~~wd~~~~~~~~~~~~~~~ 78 (316)
+.|.+||..+.+....... +...+.+++++|++ +++++...+ +.|.+||..+++...
T Consensus 66 ~~i~~~d~~~~~~~~~~~~-----------~~~~~~~i~~~~dg-~l~v~~~~~~~~~~~i~~~d~~~~~~~~------- 126 (333)
T 2dg1_A 66 GNIFKINPETKEIKRPFVS-----------HKANPAAIKIHKDG-RLFVCYLGDFKSTGGIFAATENGDNLQD------- 126 (333)
T ss_dssp CEEEEECTTTCCEEEEEEC-----------SSSSEEEEEECTTS-CEEEEECTTSSSCCEEEEECTTSCSCEE-------
T ss_pred CEEEEEeCCCCcEEEEeeC-----------CCCCcceEEECCCC-cEEEEeCCCCCCCceEEEEeCCCCEEEE-------
Confidence 5677887766554332211 34579999999998 777776665 689999988765210
Q ss_pred ceecccccccCCCcccEEEEEEccCCCeEEEecC-------CcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCC
Q 021160 79 VDTFCPRHLIGKNNIHITGLAYSNTSELLISYND-------ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNS 151 (316)
Q Consensus 79 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d-------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (316)
+. . ...+...+..++++|+|+++++... +.|..+|..++ ....+......
T Consensus 127 ---~~--~-~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~-----------------~~~~~~~~~~~ 183 (333)
T 2dg1_A 127 ---II--E-DLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFR-----------------TVTPIIQNISV 183 (333)
T ss_dssp ---EE--C-SSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSC-----------------CEEEEEEEESS
T ss_pred ---EE--c-cCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCC-----------------EEEEeecCCCc
Confidence 00 0 0123456889999999998877542 45666665443 22223222222
Q ss_pred ceeeeEEEecCCCcEE-EEeccCCeEEEEeccC-CeeEEE--------eecCccceEEEEEcCCCCeEEEEeCCCcEEEe
Q 021160 152 QTVKGVNFFGPNDEYV-MSGSDCGHLFIWKKKG-GKLVRL--------MVGDRHVVNQLEPHPHIPMFATCGIEKTVKLW 221 (316)
Q Consensus 152 ~~i~~~~~~~~~~~~l-~~~~~dg~v~~wd~~~-~~~~~~--------~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iw 221 (316)
+..++| +|+++.+ ++.+.++.|++|++.+ ++.+.. +.++ ..+..++++++++++++...++.|.+|
T Consensus 184 --~~~i~~-~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~ 259 (333)
T 2dg1_A 184 --ANGIAL-STDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVF 259 (333)
T ss_dssp --EEEEEE-CTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEE
T ss_pred --ccceEE-CCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEE
Confidence 778998 9999855 4556688999999863 332221 1122 367889999999988887778899999
Q ss_pred cCCCC
Q 021160 222 APMPT 226 (316)
Q Consensus 222 d~~~~ 226 (316)
|....
T Consensus 260 d~~g~ 264 (333)
T 2dg1_A 260 NKRGY 264 (333)
T ss_dssp CTTSC
T ss_pred CCCCC
Confidence 98544
No 187
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.49 E-value=8e-12 Score=100.65 Aligned_cols=178 Identities=6% Similarity=-0.003 Sum_probs=127.4
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
.+.|.+||..+.+....+.... ...+.++.+.|+| ++++ +.++.|..||. +++.+
T Consensus 14 ~~~v~~~d~~tG~~~w~~~~~~----------~~~~~~~~~~pdG-~ilv--s~~~~V~~~d~-~G~~~----------- 68 (276)
T 3no2_A 14 WNKIAIINKDTKEIVWEYPLEK----------GWECNSVAATKAG-EILF--SYSKGAKMITR-DGREL----------- 68 (276)
T ss_dssp CSEEEEEETTTTEEEEEEECCT----------TCCCCEEEECTTS-CEEE--ECBSEEEEECT-TSCEE-----------
T ss_pred CCEEEEEECCCCeEEEEeCCCc----------cCCCcCeEECCCC-CEEE--eCCCCEEEECC-CCCEE-----------
Confidence 4789999987777655554421 1357899999999 7777 35678999998 67632
Q ss_pred cccccccCCCcccEEEEEEccCCCeEEEe-c-CCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcC----Cceee
Q 021160 82 FCPRHLIGKNNIHITGLAYSNTSELLISY-N-DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRN----SQTVK 155 (316)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~i~ 155 (316)
..+.......+.++.+.++|+++++. . ++.|..+|.+ + +.+..+..... .....
T Consensus 69 ---W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~-G----------------k~l~~~~~~~~~~~~~~~~~ 128 (276)
T 3no2_A 69 ---WNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMK-G----------------EVLSKTEFETGIERPHAQFR 128 (276)
T ss_dssp ---EEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECTT-S----------------CEEEEEEECCSCSSGGGSCS
T ss_pred ---EEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeCC-C----------------CEEEEEeccCCCCccccccc
Confidence 12211223467889999999988874 4 6777777753 3 33333331110 01144
Q ss_pred eEEEecCCCcEEEEeccCCeEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC
Q 021160 156 GVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD 227 (316)
Q Consensus 156 ~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~ 227 (316)
.++. .++|+++++...++.|..||.+ |+.+..+... ..+.++...++++.+++++.++.|..+|..+++
T Consensus 129 ~v~~-~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~ 197 (276)
T 3no2_A 129 QINK-NKKGNYLVPLFATSEVREIAPN-GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNR 197 (276)
T ss_dssp CCEE-CTTSCEEEEETTTTEEEEECTT-SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCC
T ss_pred CceE-CCCCCEEEEecCCCEEEEECCC-CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCc
Confidence 5566 8899999999999999999998 9999888764 355678888999999988888899999999766
No 188
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.49 E-value=1e-11 Score=113.55 Aligned_cols=222 Identities=5% Similarity=-0.022 Sum_probs=142.8
Q ss_pred eeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCc----------------EEEEeCcCC
Q 021160 4 FNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEY----------------ARVYDIRKC 67 (316)
Q Consensus 4 ~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~----------------v~~wd~~~~ 67 (316)
.|++||+.+.+..+.... ...+..++|+|++ +.|+.++.++. |++|++.++
T Consensus 152 ~i~v~d~~tg~~~~~~~~------------~~~~~~~~wspDg-~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~ 218 (710)
T 2xdw_A 152 TIKFMKVDGAKELPDVLE------------RVKFSCMAWTHDG-KGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTD 218 (710)
T ss_dssp EEEEEETTTTEEEEEEEE------------EECSCCEEECTTS-SEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSC
T ss_pred EEEEEECCCCCCCccccc------------CcccceEEEEeCC-CEEEEEEECCccccccccccccCCCCEEEEEECCCC
Confidence 799999988765443221 1236689999999 78888777665 999999876
Q ss_pred cccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEE-ec-----CCcEEEEEcCC------CCCCCCccCCccc
Q 021160 68 HWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLIS-YN-----DELVYLFEKNM------GLGPSPLSLSPED 135 (316)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s-~~-----d~~i~iwd~~~------~~~~~~~~~~~~~ 135 (316)
+.. .. .... ...|...+..+.|+|+|++|+. +. +..|++||+.+ +.
T Consensus 219 ~~~-------~~---~v~~-~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~----------- 276 (710)
T 2xdw_A 219 QSE-------DI---LCAE-FPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGI----------- 276 (710)
T ss_dssp GGG-------CE---EEEC-CTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSS-----------
T ss_pred ccc-------ce---EEec-cCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCc-----------
Confidence 511 00 0001 1234556789999999996665 33 56899999976 31
Q ss_pred cccCCCcceeeCCcCCceeeeEEEecCCCcEEEEecc----CCeEEEEeccCCe--eEEEeecCcc--ceEEEEEcCCCC
Q 021160 136 LQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSD----CGHLFIWKKKGGK--LVRLMVGDRH--VVNQLEPHPHIP 207 (316)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~----dg~v~~wd~~~~~--~~~~~~~~~~--~v~~~~~~p~~~ 207 (316)
.....+..+... +.. .| +++|..|+..+. .+.|.+||+.+++ ....+..|.. .+..++|++++.
T Consensus 277 ----~~~~~l~~~~~~--~~~-~~-s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 348 (710)
T 2xdw_A 277 ----LKWVKLIDNFEG--EYD-YV-TNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNF 348 (710)
T ss_dssp ----CCCEEEECSSSS--CEE-EE-EEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTE
T ss_pred ----cceEEeeCCCCc--EEE-EE-eccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCE
Confidence 134555555543 443 35 678887776654 3469999998764 2344544543 678899998777
Q ss_pred eEEEEeCCCc--EEEecCCCCC-CCCCCCCcccceeeeecCCCCc-eeEEec---CCCeEEEEEecccC
Q 021160 208 MFATCGIEKT--VKLWAPMPTD-FPPLPDNAEKIMKANKQGREDH-SRITLT---PDVIMHVLRLQRRQ 269 (316)
Q Consensus 208 ~l~s~~~d~~--i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~s~~---~d~~~~~w~~~~~~ 269 (316)
++++...|+. |.+|++.+++ ...+..+...+.... +++++. ++++.+ ..+.+..||+.+++
T Consensus 349 lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~-~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 349 LVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYS-GQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEE-CCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEe-cCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 8888888885 5667775554 444444444444443 455554 444433 34789999988765
No 189
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.46 E-value=2.4e-10 Score=92.86 Aligned_cols=196 Identities=10% Similarity=0.096 Sum_probs=134.1
Q ss_pred ccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEe-cC
Q 021160 34 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-ND 112 (316)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d 112 (316)
...+.++++++++ +++++...++.|.+||.. ++.. .+ .. ..+...+..+++.++|.++++. .+
T Consensus 14 ~~~~~~i~~d~~g-~l~v~~~~~~~v~~~d~~-~~~~----------~~---~~-~~~~~~~~~i~~~~~g~l~v~~~~~ 77 (299)
T 2z2n_A 14 DTGPYGITVSDKG-KVWITQHKANMISCINLD-GKIT----------EY---PL-PTPDAKVMCLTISSDGEVWFTENAA 77 (299)
T ss_dssp SCCEEEEEECTTS-CEEEEETTTTEEEEECTT-CCEE----------EE---EC-SSTTCCEEEEEECTTSCEEEEETTT
T ss_pred CCCccceEECCCC-CEEEEecCCCcEEEEcCC-CCeE----------Ee---cC-CcccCceeeEEECCCCCEEEeCCCC
Confidence 3468899999998 677766667899999987 5421 11 11 1234578899999999988775 47
Q ss_pred CcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCeeEEE-ee
Q 021160 113 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRL-MV 191 (316)
Q Consensus 113 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~-~~ 191 (316)
+.|..||.... ...+........+.++++ .+++.++++...++.|..||. +++.... ..
T Consensus 78 ~~i~~~~~~g~------------------~~~~~~~~~~~~~~~i~~-~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~ 137 (299)
T 2z2n_A 78 NKIGRITKKGI------------------IKEYTLPNPDSAPYGITE-GPNGDIWFTEMNGNRIGRITD-DGKIREYELP 137 (299)
T ss_dssp TEEEEECTTSC------------------EEEEECSSTTCCEEEEEE-CTTSCEEEEETTTTEEEEECT-TCCEEEEECS
T ss_pred CeEEEECCCCc------------------EEEEeCCCcCCCceeeEE-CCCCCEEEEecCCceEEEECC-CCCEEEecCC
Confidence 88999997522 122221111123888998 889988888877899999998 5654432 23
Q ss_pred cCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCCCCC--CCCCcccceeeeecCCCCceeEEecCCCeEEEEEeccc
Q 021160 192 GDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPP--LPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR 268 (316)
Q Consensus 192 ~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~ 268 (316)
.....+..+++.|++.++++...++.|..||. +++... +......+..+. ..+++.+.++...++.+..|+. ++
T Consensus 138 ~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~-~~~~g~l~v~~~~~~~i~~~~~-~g 213 (299)
T 2z2n_A 138 NKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGIT-KGNDDALWFVEIIGNKIGRITT-SG 213 (299)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEE-ECTTSSEEEEETTTTEEEEECT-TC
T ss_pred CCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEE-ECCCCCEEEEccCCceEEEECC-CC
Confidence 34457899999999988877777789999998 554322 222222333333 5567777777777888888887 44
No 190
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.45 E-value=2.6e-10 Score=92.64 Aligned_cols=194 Identities=7% Similarity=0.041 Sum_probs=133.1
Q ss_pred ccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEe-cC
Q 021160 34 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-ND 112 (316)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d 112 (316)
...+.++++++++ .++++...++.|..|+.. ++. ..+. . ......+..+++.++|+++++. .+
T Consensus 56 ~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~-g~~----------~~~~---~-~~~~~~~~~i~~~~~g~l~v~~~~~ 119 (299)
T 2z2n_A 56 DAKVMCLTISSDG-EVWFTENAANKIGRITKK-GII----------KEYT---L-PNPDSAPYGITEGPNGDIWFTEMNG 119 (299)
T ss_dssp TCCEEEEEECTTS-CEEEEETTTTEEEEECTT-SCE----------EEEE---C-SSTTCCEEEEEECTTSCEEEEETTT
T ss_pred cCceeeEEECCCC-CEEEeCCCCCeEEEECCC-CcE----------EEEe---C-CCcCCCceeeEECCCCCEEEEecCC
Confidence 3568899999988 777776667889999976 321 1111 1 1234568899999999987775 57
Q ss_pred CcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCeeEEE-ee
Q 021160 113 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRL-MV 191 (316)
Q Consensus 113 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~-~~ 191 (316)
+.|.+||. ++ .. ..+........+..+++ .+++.++++...++.|..||. +++.... +.
T Consensus 120 ~~i~~~d~-~g----------------~~-~~~~~~~~~~~~~~i~~-~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~ 179 (299)
T 2z2n_A 120 NRIGRITD-DG----------------KI-REYELPNKGSYPSFITL-GSDNALWFTENQNNAIGRITE-SGDITEFKIP 179 (299)
T ss_dssp TEEEEECT-TC----------------CE-EEEECSSTTCCEEEEEE-CTTSCEEEEETTTTEEEEECT-TCCEEEEECS
T ss_pred ceEEEECC-CC----------------CE-EEecCCCCCCCCceEEE-cCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCC
Confidence 88999998 43 11 22221111123888998 889988887777889999999 6765443 33
Q ss_pred cCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCCCCC--CCCCcccceeeeecCCCCceeEEecCCCeEEEEEe
Q 021160 192 GDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPP--LPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRL 265 (316)
Q Consensus 192 ~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~ 265 (316)
.....+..+++++++.++++...++.|.+|+. ++.... +......+..+. ..+++++.++...++.|..|+.
T Consensus 180 ~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~-~~~~g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 180 TPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAIT-AGAGIDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp STTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEE-ECSTTCEEEEETTTTEEEEEET
T ss_pred CCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEE-ECCCCCEEEeccCCceEEEECC
Confidence 34456889999999988777767889999999 554222 222223344444 5667777777777888899986
No 191
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.45 E-value=1.3e-11 Score=100.65 Aligned_cols=194 Identities=12% Similarity=0.036 Sum_probs=130.3
Q ss_pred ccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEe-cC
Q 021160 34 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-ND 112 (316)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d 112 (316)
.....+++|+|++..+++++..++.|..|+..++ . ..+ ..+...+.+++++++|+++++. .+
T Consensus 27 ~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~----------~~~------~~~~~~~~~l~~~~dg~l~v~~~~~ 89 (296)
T 3e5z_A 27 FTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-L----------SPE------MHPSHHQNGHCLNKQGHLIACSHGL 89 (296)
T ss_dssp CSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-E----------EEE------ESSCSSEEEEEECTTCCEEEEETTT
T ss_pred CccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-e----------EEE------ECCCCCcceeeECCCCcEEEEecCC
Confidence 3457799999999338888889999999998865 2 111 2234568899999999988876 46
Q ss_pred CcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcC--CceeeeEEEecCCCcEEEE----ec-------------cC
Q 021160 113 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRN--SQTVKGVNFFGPNDEYVMS----GS-------------DC 173 (316)
Q Consensus 113 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~l~~----~~-------------~d 173 (316)
+.|.+||..++ +.......... ...+..+++ +|+|+++++ |+ ..
T Consensus 90 ~~i~~~d~~~g----------------~~~~~~~~~~~~~~~~~~~i~~-d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~ 152 (296)
T 3e5z_A 90 RRLERQREPGG----------------EWESIADSFEGKKLNSPNDVCL-APDGSLWFSDPTYGIDKPEEGYGGEMELPG 152 (296)
T ss_dssp TEEEEECSTTC----------------CEEEEECEETTEECCCCCCEEE-CTTSCEEEEECSHHHHCGGGSSCCCCCSSS
T ss_pred CeEEEEcCCCC----------------cEEEEeeccCCCCCCCCCCEEE-CCCCCEEEECCccccccccccccccccCCC
Confidence 89999998766 22221111110 112678998 899998887 43 13
Q ss_pred CeEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEecCC-CCCC----CCCCCCcccceeeeecCCCC
Q 021160 174 GHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPM-PTDF----PPLPDNAEKIMKANKQGRED 248 (316)
Q Consensus 174 g~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~-~~~~----~~~~~~~~~~~~~~~~~~~~ 248 (316)
+.|..++.. ++. ..+..+......++|+|+++.+++.+.++.|.+|++. .+.+ ..+..+...+..+ .+.+++
T Consensus 153 ~~l~~~~~~-g~~-~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i-~~d~~G 229 (296)
T 3e5z_A 153 RWVFRLAPD-GTL-SAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGL-RVDAGG 229 (296)
T ss_dssp CEEEEECTT-SCE-EEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSE-EEBTTS
T ss_pred cEEEEECCC-CCE-EEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeE-EECCCC
Confidence 467777665 543 3444555677899999999988777788999999986 3322 1111111222223 356777
Q ss_pred ceeEEecCCCeEEEEEec
Q 021160 249 HSRITLTPDVIMHVLRLQ 266 (316)
Q Consensus 249 ~~~~s~~~d~~~~~w~~~ 266 (316)
++.++. ++.|.+|+..
T Consensus 230 ~l~v~~--~~~v~~~~~~ 245 (296)
T 3e5z_A 230 LIWASA--GDGVHVLTPD 245 (296)
T ss_dssp CEEEEE--TTEEEEECTT
T ss_pred CEEEEc--CCeEEEECCC
Confidence 777766 7889999865
No 192
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.44 E-value=2.4e-10 Score=100.98 Aligned_cols=217 Identities=9% Similarity=0.022 Sum_probs=143.0
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCc--CCcccCCCCCCCCc
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIR--KCHWYSPISSDTPV 79 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~--~~~~~~~~~~~~~~ 79 (316)
+|.|.++|+.+.+....+... ..+..+.|+|++ +++++++.|+.|.+||+. +.+.
T Consensus 176 ~~~V~viD~~t~~v~~~i~~g------------~~p~~v~~SpDG-r~lyv~~~dg~V~viD~~~~t~~~---------- 232 (567)
T 1qks_A 176 AGQIALIDGSTYEIKTVLDTG------------YAVHISRLSASG-RYLFVIGRDGKVNMIDLWMKEPTT---------- 232 (567)
T ss_dssp TTEEEEEETTTCCEEEEEECS------------SCEEEEEECTTS-CEEEEEETTSEEEEEETTSSSCCE----------
T ss_pred CCeEEEEECCCCeEEEEEeCC------------CCccceEECCCC-CEEEEEcCCCeEEEEECCCCCCcE----------
Confidence 478999999887765555432 246689999999 888888999999999995 5542
Q ss_pred eecccccccCCCcccEEEEEEc----cCCCeEEEe--cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcC---
Q 021160 80 DTFCPRHLIGKNNIHITGLAYS----NTSELLISY--NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRN--- 150 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~i~~~~~~----~~~~~l~s~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 150 (316)
...+.. ......++|+ |+|++++.+ .+++|.++|..+. +.++.+.....
T Consensus 233 ----v~~i~~--G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~----------------~~~~~i~~~~~~~~ 290 (567)
T 1qks_A 233 ----VAEIKI--GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETL----------------EPKKIQSTRGMTYD 290 (567)
T ss_dssp ----EEEEEC--CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTC----------------CEEEEEECCEECTT
T ss_pred ----eEEEec--CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCC----------------cEEEEEeccccccc
Confidence 122212 1235689999 699866653 5899999998776 45555442110
Q ss_pred ------CceeeeEEEecCCC-cEEEEeccCCeEEEEeccCCeeEE--EeecCccceEEEEEcCCCCeEEEE-eCCCcEEE
Q 021160 151 ------SQTVKGVNFFGPND-EYVMSGSDCGHLFIWKKKGGKLVR--LMVGDRHVVNQLEPHPHIPMFATC-GIEKTVKL 220 (316)
Q Consensus 151 ------~~~i~~~~~~~~~~-~~l~~~~~dg~v~~wd~~~~~~~~--~~~~~~~~v~~~~~~p~~~~l~s~-~~d~~i~i 220 (316)
...+..+.. ++++ .+++...+.|.|.++|....+.+. .+. .......+.|+|++++++++ ..++.|.+
T Consensus 291 ~~~~~p~~rva~i~~-s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~-~~~~~~d~~~~pdgr~~~va~~~sn~V~V 368 (567)
T 1qks_A 291 EQEYHPEPRVAAILA-SHYRPEFIVNVKETGKILLVDYTDLNNLKTTEIS-AERFLHDGGLDGSHRYFITAANARNKLVV 368 (567)
T ss_dssp TCCEESCCCEEEEEE-CSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEE-CCSSEEEEEECTTSCEEEEEEGGGTEEEE
T ss_pred cccccCCCceEEEEE-cCCCCEEEEEecCCCeEEEEecCCCccceeeeee-ccccccCceECCCCCEEEEEeCCCCeEEE
Confidence 112667776 6654 456666778999999987654322 222 23456788999999996554 46789999
Q ss_pred ecCCCCCCC-CCC-----CCcccceeeeecCCC-CceeEEec-CCCeEEEEEecc
Q 021160 221 WAPMPTDFP-PLP-----DNAEKIMKANKQGRE-DHSRITLT-PDVIMHVLRLQR 267 (316)
Q Consensus 221 wd~~~~~~~-~~~-----~~~~~~~~~~~~~~~-~~~~~s~~-~d~~~~~w~~~~ 267 (316)
+|+.++++. .+. .|... ..++..++ +...++.. .++.|.+++...
T Consensus 369 iD~~t~kl~~~i~vgg~~Phpg~--g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 369 IDTKEGKLVAIEDTGGQTPHPGR--GANFVHPTFGPVWATSHMGDDSVALIGTDP 421 (567)
T ss_dssp EETTTTEEEEEEECSSSSBCCTT--CEEEEETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred EECCCCcEEEEEeccCcCCCCcc--ceeeECCCCCcEEEeCCCCCCeEEEecCCC
Confidence 999987622 111 12211 12234554 44445443 568999999876
No 193
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.43 E-value=3.4e-11 Score=100.98 Aligned_cols=198 Identities=6% Similarity=-0.030 Sum_probs=116.4
Q ss_pred eeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEec--CCcEEEEeCcCCcccCCCCCCCCce
Q 021160 3 LFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGS--DEYARVYDIRKCHWYSPISSDTPVD 80 (316)
Q Consensus 3 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~--dg~v~~wd~~~~~~~~~~~~~~~~~ 80 (316)
+.|.+||+.+.+....+....... .+......++|+|++ ++|+++.. ++.|.+||+.+++....
T Consensus 81 ~~v~v~d~~t~~~~~~i~~~~~~~-----~~g~~p~~i~~spdg-~~l~v~n~~~~~~v~v~d~~~~~~~~~-------- 146 (361)
T 2oiz_A 81 DVVEVWDADKLTFEKEISLPPKRV-----QGLNYDGLFRQTTDG-KFIVLQNASPATSIGIVDVAKGDYVED-------- 146 (361)
T ss_dssp EEEEEEETTTCCEEEEEEECTTBC-----CBCCCGGGEEECTTS-SEEEEEEESSSEEEEEEETTTTEEEEE--------
T ss_pred CEEEEEECcCCcEEEEEEcCcccc-----ccCCCcceEEECCCC-CEEEEECCCCCCeEEEEECCCCcEEEE--------
Confidence 569999998777665555431110 012345689999999 77777753 68999999998873211
Q ss_pred ecccccccCCCcccEEEEEEccCC-CeEEE-ecCCcEEEEEcCCCCCCC-C----ccCCccc-------cccC-------
Q 021160 81 TFCPRHLIGKNNIHITGLAYSNTS-ELLIS-YNDELVYLFEKNMGLGPS-P----LSLSPED-------LQKR------- 139 (316)
Q Consensus 81 ~~~~~~~~~~~~~~i~~~~~~~~~-~~l~s-~~d~~i~iwd~~~~~~~~-~----~~~~~~~-------~~~~------- 139 (316)
+ +.. .....+.+.|++ ..+++ +.||.+.+|++....... . ..+.... .+..
T Consensus 147 -~----i~~---~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 218 (361)
T 2oiz_A 147 -V----TAA---AGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVS 218 (361)
T ss_dssp -E----GGG---TTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEB
T ss_pred -E----ecC---CCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEe
Confidence 0 100 111224455554 23333 456666666654310000 0 0000000 0000
Q ss_pred --CCcceeeCCcC---------------------CceeeeEEEecCCCcEEEEecc-----------CCeEEEEeccCCe
Q 021160 140 --EEPQVYSGHRN---------------------SQTVKGVNFFGPNDEYVMSGSD-----------CGHLFIWKKKGGK 185 (316)
Q Consensus 140 --~~~~~~~~~~~---------------------~~~i~~~~~~~~~~~~l~~~~~-----------dg~v~~wd~~~~~ 185 (316)
..+..+..... +.....++| +|++..++++.. .+.|.+||+.+++
T Consensus 219 ~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~-~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~ 297 (361)
T 2oiz_A 219 YYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGL-HRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ 297 (361)
T ss_dssp TTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEE-ETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTE
T ss_pred CCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEE-ecCCCeEEEEEccCCCcccccCCCceEEEEECCCCc
Confidence 00000000000 000112677 888887776643 3589999999999
Q ss_pred eEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCC
Q 021160 186 LVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPT 226 (316)
Q Consensus 186 ~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~ 226 (316)
.+..+..+. +..++|+|++++|++++. +.|.+||.+++
T Consensus 298 ~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 298 RVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQP 335 (361)
T ss_dssp EEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSS
T ss_pred EEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCC
Confidence 999998876 899999999999888886 99999999987
No 194
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.42 E-value=5.2e-12 Score=105.21 Aligned_cols=200 Identities=11% Similarity=0.114 Sum_probs=124.3
Q ss_pred eeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEec---------------------------C
Q 021160 4 FNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGS---------------------------D 56 (316)
Q Consensus 4 ~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~---------------------------d 56 (316)
.|.+||+.+.+..++... .. +..++|+|++ +.|+.++. .
T Consensus 86 ~l~~~~~~~g~~~~l~~~------------~~-~~~~~wspdg-~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 151 (347)
T 2gop_A 86 EIWVADLETLSSKKILEA------------KN-IRSLEWNEDS-RKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEK 151 (347)
T ss_dssp EEEEEETTTTEEEEEEEE------------SE-EEEEEECTTS-SEEEEEEECCCC---------CCCC---------CE
T ss_pred eEEEEECCCCceEEEEcC------------CC-ccceeECCCC-CEEEEEEccCCCcCCcEEEcccceeecCcccccCcc
Confidence 466777766554433332 23 8899999999 67776653 2
Q ss_pred CcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEe-cC------C-cEEEEEcCCCCCCCC
Q 021160 57 EYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-ND------E-LVYLFEKNMGLGPSP 128 (316)
Q Consensus 57 g~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d------~-~i~iwd~~~~~~~~~ 128 (316)
..|.+||+.+++. ...+ .. . .+..++|+|+| +++++ .+ . ...+|.++++
T Consensus 152 ~~l~~~d~~~~~~--------------~~~l-~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~----- 208 (347)
T 2gop_A 152 TTFWIFDTESEEV--------------IEEF-EK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDG----- 208 (347)
T ss_dssp EEEEEEETTTTEE--------------EEEE-EE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETT-----
T ss_pred ceEEEEECCCCeE--------------Eeee-cC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCC-----
Confidence 5688899987752 0111 11 2 56788999999 76665 22 2 3445544333
Q ss_pred ccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEeccC--------CeEEEEeccCCeeEEEeecCccceEE-
Q 021160 129 LSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDC--------GHLFIWKKKGGKLVRLMVGDRHVVNQ- 199 (316)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d--------g~v~~wd~~~~~~~~~~~~~~~~v~~- 199 (316)
....+..+ .. +.. + +|+|++|+.++.+ ..|++|| +++.......+...+..
T Consensus 209 ------------~~~~l~~~-~~--~~~--~-spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~ 268 (347)
T 2gop_A 209 ------------KEEKMFEK-VS--FYA--V-DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQA 268 (347)
T ss_dssp ------------EEEEEEEE-ES--EEE--E-EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEE
T ss_pred ------------ceEEeccC-cc--eee--E-CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCc
Confidence 22333333 22 433 4 7899988877643 4788888 56655444556677886
Q ss_pred EEEcCCCCeEEEEeCCCcEEEecCCCCCCCCCCCCcccceeeeecCCCCceeEEecCCCeE-EEEEec
Q 021160 200 LEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLTPDVIM-HVLRLQ 266 (316)
Q Consensus 200 ~~~~p~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~-~~w~~~ 266 (316)
+.|+ ++ ++++++.++.+++| +..++...+..+...+.... +++ .++++.+.++.. .+|.+.
T Consensus 269 ~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~~~~~~~~~v~~~~-~s~--~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 269 KIKD-GK-VYFTLFEEGSVNLY-IWDGEIKPIAKGRHWIMGFD-VDE--IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp EEET-TE-EEEEEEETTEEEEE-EESSSEEEEECSSSEEEEEE-ESS--SEEEEEECSSSCCEEEEES
T ss_pred cEEc-Cc-EEEEEecCCcEEEE-EcCCceEEEecCCCeEEeee-eeC--cEEEEEcCCCChHHheEeC
Confidence 8999 88 88899999999999 87444333333334444444 444 566666655543 777765
No 195
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.40 E-value=2.3e-11 Score=100.65 Aligned_cols=250 Identities=7% Similarity=-0.037 Sum_probs=152.7
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
.+.|.+||..+.+....+...... .........+++.. + .++++...++.|.+||..+++..
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~-----~~lg~~~~~i~~~~-~-~lyv~~~~~~~v~viD~~t~~~~----------- 77 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANG-----FKLGDVAQSMVIRD-G-IGWIVVNNSHVIFAIDINTFKEV----------- 77 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHS-----SCCBSCEEEEEEET-T-EEEEEEGGGTEEEEEETTTCCEE-----------
T ss_pred CceEEEEECCCCEEhhhhHhhhcC-----cccCccceEEEEEC-C-EEEEEEcCCCEEEEEECcccEEE-----------
Confidence 468899998776543222110000 01123457788754 3 56677777899999999988732
Q ss_pred cccccccCCCcccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcC---CceeeeE
Q 021160 82 FCPRHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRN---SQTVKGV 157 (316)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~ 157 (316)
..+ . .......++++++++++++. .++.|.+||..++ +....+..... ......+
T Consensus 78 ---~~i-~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~----------------~~~~~i~~g~~~~~~~~p~~i 136 (328)
T 3dsm_A 78 ---GRI-T-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTY----------------EITGYIECPDMDMESGSTEQM 136 (328)
T ss_dssp ---EEE-E-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTT----------------EEEEEEECTTCCTTTCBCCCE
T ss_pred ---EEc-C-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCC----------------eEEEEEEcCCccccCCCcceE
Confidence 222 1 13457889999998777775 6999999999877 44444443220 0025667
Q ss_pred EEecCCCcEEEEec-cCCeEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCC----------CcEEEecCCCC
Q 021160 158 NFFGPNDEYVMSGS-DCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIE----------KTVKLWAPMPT 226 (316)
Q Consensus 158 ~~~~~~~~~l~~~~-~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d----------~~i~iwd~~~~ 226 (316)
++ . ++.++++.. .++.|.++|+.+++.+..+... .....++++|++++++++..+ +.|.++|..+.
T Consensus 137 ~~-~-~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g-~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~ 213 (328)
T 3dsm_A 137 VQ-Y-GKYVYVNCWSYQNRILKIDTETDKVVDELTIG-IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETF 213 (328)
T ss_dssp EE-E-TTEEEEEECTTCCEEEEEETTTTEEEEEEECS-SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTT
T ss_pred EE-E-CCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC-CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCC
Confidence 76 2 344444443 4889999999999988887653 345679999999987776654 78999999877
Q ss_pred CCC-CCCCC-cccceeeeecCCCCceeEEecCCCeEEEEEecccCcce--eEEe-ecccccccccCCCCeEEEEe
Q 021160 227 DFP-PLPDN-AEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTLA--YRER-RYNAADFESDEEEGETYLLG 296 (316)
Q Consensus 227 ~~~-~~~~~-~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~v~~~~ 296 (316)
++. .+... ......++ +++++..+..... .+.+||..+++... +... ......++.+.+++.+|+.+
T Consensus 214 ~v~~~~~~~~g~~p~~la-~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~ 285 (328)
T 3dsm_A 214 TVEKQFKFKLGDWPSEVQ-LNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVAD 285 (328)
T ss_dssp EEEEEEECCTTCCCEEEE-ECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEE
T ss_pred eEEEEEecCCCCCceeEE-EecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEc
Confidence 622 22111 12233444 6666666655544 78899987765321 1110 11122233444556677666
No 196
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.38 E-value=3e-10 Score=93.07 Aligned_cols=224 Identities=11% Similarity=0.049 Sum_probs=138.1
Q ss_pred eeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCC-CCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 3 LFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPR-NPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 3 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~-~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
|.|.+||..+.+... +..... .++...+.+++++++ + +++++.. ...|.+||.. ++....
T Consensus 46 ~~i~~~d~~~g~~~~-~~~~~~------~~~~~~~~~i~~~~~~g-~l~v~~~-~~~l~~~d~~-g~~~~~--------- 106 (314)
T 1pjx_A 46 GEILRIDLKTGKKTV-ICKPEV------NGYGGIPAGCQCDRDAN-QLFVADM-RLGLLVVQTD-GTFEEI--------- 106 (314)
T ss_dssp CEEEEECTTTCCEEE-EECCEE------TTEECCEEEEEECSSSS-EEEEEET-TTEEEEEETT-SCEEEC---------
T ss_pred CEEEEEeCCCCcEEE-EEeccc------CCCCCCCceEEEecCCC-cEEEEEC-CCCEEEEeCC-CCEEEE---------
Confidence 567888876554322 211000 123456899999998 6 5555444 4478899988 652110
Q ss_pred cccccccCCCcccEEEEEEccCCCeEEEe-cC---------------CcEEEEEcCCCCCCCCccCCccccccCCCccee
Q 021160 82 FCPRHLIGKNNIHITGLAYSNTSELLISY-ND---------------ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVY 145 (316)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d---------------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (316)
............+.++++.++|+++++. .+ +.|..|+.. + +. ..+
T Consensus 107 -~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g----------------~~-~~~ 167 (314)
T 1pjx_A 107 -AKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-G----------------QM-IQV 167 (314)
T ss_dssp -CSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-S----------------CE-EEE
T ss_pred -EeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-C----------------CE-EEe
Confidence 0000001122457899999999977775 33 467777654 3 22 222
Q ss_pred eCCcCCceeeeEEEec----CCCcEEE-EeccCCeEEEEecc-CCee-----EEEeecCc-cceEEEEEcCCCCeEEEEe
Q 021160 146 SGHRNSQTVKGVNFFG----PNDEYVM-SGSDCGHLFIWKKK-GGKL-----VRLMVGDR-HVVNQLEPHPHIPMFATCG 213 (316)
Q Consensus 146 ~~~~~~~~i~~~~~~~----~~~~~l~-~~~~dg~v~~wd~~-~~~~-----~~~~~~~~-~~v~~~~~~p~~~~l~s~~ 213 (316)
..+... ...+++ + ++++.++ +...++.|.+|++. +++. ...+..+. ..+..++++++++++++..
T Consensus 168 ~~~~~~--~~~i~~-~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~ 244 (314)
T 1pjx_A 168 DTAFQF--PNGIAV-RHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANW 244 (314)
T ss_dssp EEEESS--EEEEEE-EECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEE
T ss_pred ccCCCC--cceEEE-ecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEc
Confidence 222222 677888 8 8886554 44568999999986 4542 23333343 5678899999999888877
Q ss_pred CCCcEEEecCCCCC-CCCCCCCcccceeeeecCCCCc-eeEEecCCCeEEEEEeccc
Q 021160 214 IEKTVKLWAPMPTD-FPPLPDNAEKIMKANKQGREDH-SRITLTPDVIMHVLRLQRR 268 (316)
Q Consensus 214 ~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~d~~~~~w~~~~~ 268 (316)
.++.|.+||..+++ ...+..+...+..+. +.++++ +.++...++.|..+++...
T Consensus 245 ~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~-~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 245 GSSHIEVFGPDGGQPKMRIRCPFEKPSNLH-FKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp TTTEEEEECTTCBSCSEEEECSSSCEEEEE-ECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred CCCEEEEEcCCCCcEeEEEeCCCCCceeEE-ECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 78899999998554 333333334444455 467777 5666667788888887654
No 197
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.38 E-value=3.7e-11 Score=110.34 Aligned_cols=199 Identities=12% Similarity=0.119 Sum_probs=123.5
Q ss_pred CccceEEEEECCCCCcEEEEEecC-----CcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeE
Q 021160 33 NSIRLNAIVIDPRNPNYFAVGGSD-----EYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELL 107 (316)
Q Consensus 33 h~~~v~~~~~~~~~~~~l~~g~~d-----g~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 107 (316)
|...+..++|+|+| ++||.++.+ ..|++||+.+++.. ... .+...+..++|+|+ +.|
T Consensus 161 ~~~~~~~~~~SPDG-~~la~~~~~~G~e~~~i~v~dl~tg~~~--------------~~~--~~~~~~~~~~wspD-~~l 222 (741)
T 1yr2_A 161 GATALDAWAASDDG-RLLAYSVQDGGSDWRTVKFVGVADGKPL--------------ADE--LKWVKFSGLAWLGN-DAL 222 (741)
T ss_dssp --EEEEEEEECTTS-SEEEEEEEETTCSEEEEEEEETTTCCEE--------------EEE--EEEEESCCCEESTT-SEE
T ss_pred CCEEEEeEEECCCC-CEEEEEEcCCCCceEEEEEEECCCCCCC--------------Ccc--CCCceeccEEEECC-CEE
Confidence 44578899999999 777766543 35999999988631 100 01112357899999 855
Q ss_pred EE-ecCC--------------cEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEecc
Q 021160 108 IS-YNDE--------------LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSD 172 (316)
Q Consensus 108 ~s-~~d~--------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~ 172 (316)
+. ..++ .|++|++.++.. .....+........+.++.| +|+|++|+..+.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~--------------~~~lv~~~~~~~~~~~~~~~-SpDG~~l~~~~~ 287 (741)
T 1yr2_A 223 LYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQS--------------ADQPVFATPELPKRGHGASV-SSDGRWVVITSS 287 (741)
T ss_dssp EEEECCCC--------CCCCCEEEEEETTSCGG--------------GCEEEECCTTCTTCEEEEEE-CTTSCEEEEEEE
T ss_pred EEEEecCcccccccccCCCCCEEEEEECCCCch--------------hCEEEeccCCCCeEEEEEEE-CCCCCEEEEEEE
Confidence 55 4433 388999876510 01122332222123788888 999999888775
Q ss_pred CC-----eEEEEeccCC--eeEEEeecCccceEEEEEcCCCCeEEEEeCC----CcEEEecCCCC--CCCCCCCCcccce
Q 021160 173 CG-----HLFIWKKKGG--KLVRLMVGDRHVVNQLEPHPHIPMFATCGIE----KTVKLWAPMPT--DFPPLPDNAEKIM 239 (316)
Q Consensus 173 dg-----~v~~wd~~~~--~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d----~~i~iwd~~~~--~~~~~~~~~~~~~ 239 (316)
++ .|++||+.++ +....+..+...+.... +|+++.|+..+.+ +.|.+|++.+. ....+..+....+
T Consensus 288 ~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l 366 (741)
T 1yr2_A 288 EGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNL 366 (741)
T ss_dssp CTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEE
T ss_pred ccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeE
Confidence 44 8999999887 31455555555555553 4888887776653 45999998774 2222222222222
Q ss_pred eeeecCCCCceeEEecCCCeEEEEEec
Q 021160 240 KANKQGREDHSRITLTPDVIMHVLRLQ 266 (316)
Q Consensus 240 ~~~~~~~~~~~~~s~~~d~~~~~w~~~ 266 (316)
....+. ++.++++...++..++|.+.
T Consensus 367 ~~~~~~-~~~lv~~~~~dg~~~l~~~~ 392 (741)
T 1yr2_A 367 ESVGIA-GNRLFASYIHDAKSQVLAFD 392 (741)
T ss_dssp EEEEEE-BTEEEEEEEETTEEEEEEEE
T ss_pred EEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 222222 56678888889988888765
No 198
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.38 E-value=2.9e-11 Score=110.26 Aligned_cols=223 Identities=7% Similarity=-0.081 Sum_probs=134.3
Q ss_pred eeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCc-------------EEEEeCcCCcc
Q 021160 3 LFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEY-------------ARVYDIRKCHW 69 (316)
Q Consensus 3 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~-------------v~~wd~~~~~~ 69 (316)
..|++||+.+.+....... . ......++|+|+| +.|+.++.|.. |++|++.+++.
T Consensus 147 ~~i~v~dl~tg~~~~~~~~---~--------~~~~~~~~wspDg-~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~ 214 (695)
T 2bkl_A 147 AVLHVIDVDSGEWSKVDVI---E--------GGKYATPKWTPDS-KGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPS 214 (695)
T ss_dssp CEEEEEETTTCCBCSSCCB---S--------CCTTCCCEECTTS-SEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGG
T ss_pred EEEEEEECCCCCCcCCccc---C--------cccccceEEecCC-CEEEEEEecCCCCCccccCCCCCEEEEEECCCCch
Confidence 4789999987764310001 0 1112679999999 78888887765 99999987751
Q ss_pred cCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEE-ecCC----cEEEEEcCCCCCCCCccCCccccccCCCcce
Q 021160 70 YSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLIS-YNDE----LVYLFEKNMGLGPSPLSLSPEDLQKREEPQV 144 (316)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s-~~d~----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (316)
. .. .... ...|...+..+.|+|+|++|+. +.++ .|++|+..++ ....
T Consensus 215 ~-------~~---lv~~-~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~-----------------~~~~ 266 (695)
T 2bkl_A 215 K-------DT---VVHE-RTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEK-----------------DFRL 266 (695)
T ss_dssp G-------CE---EEEC-CCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCS-----------------SCEE
T ss_pred h-------ce---EEEe-cCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCC-----------------ceEE
Confidence 1 00 0111 1334567889999999996665 4444 5666655443 3344
Q ss_pred eeCCcCCceeeeEEEecCCCcEEEEec---cCCeEEEEeccCCee---EEEeecC-ccceEEEEEcCCCCeEEEEeCCCc
Q 021160 145 YSGHRNSQTVKGVNFFGPNDEYVMSGS---DCGHLFIWKKKGGKL---VRLMVGD-RHVVNQLEPHPHIPMFATCGIEKT 217 (316)
Q Consensus 145 ~~~~~~~~~i~~~~~~~~~~~~l~~~~---~dg~v~~wd~~~~~~---~~~~~~~-~~~v~~~~~~p~~~~l~s~~~d~~ 217 (316)
+..+... +....+ + ++.+++... .++.|++||+.+++. ...+..+ ...+..++|+ ++.++++...|+.
T Consensus 267 l~~~~~~--~~~~~~-~-~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~ 341 (695)
T 2bkl_A 267 LVKGVGA--KYEVHA-W-KDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDAT 341 (695)
T ss_dssp EEECSSC--CEEEEE-E-TTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTE
T ss_pred eecCCCc--eEEEEe-c-CCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCE
Confidence 5544433 555555 4 555444443 268899999987653 3333333 4467888888 6677888889998
Q ss_pred EEEecCC--CCCCCCCCCC-cccceeeeecCCCCceeE-E---ecCCCeEEEEEecccCcc
Q 021160 218 VKLWAPM--PTDFPPLPDN-AEKIMKANKQGREDHSRI-T---LTPDVIMHVLRLQRRQTL 271 (316)
Q Consensus 218 i~iwd~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-s---~~~d~~~~~w~~~~~~~~ 271 (316)
.+||.+. .+....+..+ ...+.... +++++..++ + ....+.+.+||+.+++..
T Consensus 342 ~~l~~~~~~g~~~~~l~~~~~~~v~~~~-~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~ 401 (695)
T 2bkl_A 342 SEVRVATLKGKPVRTVQLPGVGAASNLM-GLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSE 401 (695)
T ss_dssp EEEEEEETTCCEEEECCCSSSSEECCCB-SCTTCSEEEEEEEETTEEEEEEEEETTTCCEE
T ss_pred EEEEEEeCCCCeeEEecCCCCeEEEEee-cCCCCCEEEEEEcCCCCCCEEEEEECCCCcEE
Confidence 8887544 3333334323 23333333 455655444 3 333478999998876543
No 199
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.36 E-value=2.9e-10 Score=96.86 Aligned_cols=197 Identities=11% Similarity=0.013 Sum_probs=126.9
Q ss_pred cceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEe-cCC
Q 021160 35 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-NDE 113 (316)
Q Consensus 35 ~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~ 113 (316)
.....++|++++ +++++...++.|++||..++++. .+......+ . ++|+++++.|+.+ .++
T Consensus 131 ~~P~~la~d~~g-~lyv~d~~~~~I~~id~~~g~~~---------------~~~~~~~~~-~-ia~~~~g~~l~~~d~~~ 192 (409)
T 3hrp_A 131 KYMWGIAAVGNN-TVLAYQRDDPRVRLISVDDNKVT---------------TVHPGFKGG-K-PAVTKDKQRVYSIGWEG 192 (409)
T ss_dssp CCEEEEEECSTT-EEEEEETTTTEEEEEETTTTEEE---------------EEEETCCBC-B-CEECTTSSEEEEEBSST
T ss_pred CCceEEEEeCCC-CEEEEecCCCcEEEEECCCCEEE---------------EeeccCCCC-c-eeEecCCCcEEEEecCC
Confidence 457899999998 77777777899999999877631 111111222 3 8999999866654 434
Q ss_pred --cEEEEEcCCCCCCCCccCCccccccCCCccee---eC-CcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCeeE
Q 021160 114 --LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVY---SG-HRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLV 187 (316)
Q Consensus 114 --~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~ 187 (316)
.|.+++.... .....+ .. .. ..+.++++ +|++..|+.+..++.|+.||..++...
T Consensus 193 ~~~I~~~d~~~~----------------~~~~~~g~~~~~~~--~~p~~iav-~p~~g~lyv~d~~~~I~~~d~~~~~~~ 253 (409)
T 3hrp_A 193 THTVYVYMKASG----------------WAPTRIGQLGSTFS--GKIGAVAL-DETEEWLYFVDSNKNFGRFNVKTQEVT 253 (409)
T ss_dssp TCEEEEEEGGGT----------------TCEEEEEECCTTSC--SCCCBCEE-CTTSSEEEEECTTCEEEEEETTTCCEE
T ss_pred CceEEEEEcCCC----------------ceeEEeeeccchhc--CCcEEEEE-eCCCCeEEEEECCCcEEEEECCCCCEE
Confidence 7899988765 222222 11 22 23788998 885555555777889999999877643
Q ss_pred EE----eecCccce-E-EEEEcCC-CCeEEEEeCCCcEEEecCCCCCCCCCCCC---------------cccceeeeecC
Q 021160 188 RL----MVGDRHVV-N-QLEPHPH-IPMFATCGIEKTVKLWAPMPTDFPPLPDN---------------AEKIMKANKQG 245 (316)
Q Consensus 188 ~~----~~~~~~~v-~-~~~~~p~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~---------------~~~~~~~~~~~ 245 (316)
.. ..++...- . .++|+|+ +.++++-...+.|+.|+..... ..+.++ ......++ +.
T Consensus 254 ~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~~-~~~~g~~~~~g~~dg~~~~~~~~~P~gia-~d 331 (409)
T 3hrp_A 254 LIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGEC-EWFCGSATQKTVQDGLREEALFAQPNGMT-VD 331 (409)
T ss_dssp EEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCCE-EEEEECTTCCSCBCEEGGGCBCSSEEEEE-EC
T ss_pred EEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCCE-EEEEeCCCCCCcCCCcccccEeCCCeEEE-Ee
Confidence 22 22222222 3 8999995 5556676778899999976532 111111 01122333 66
Q ss_pred CCCceeEEec-CCCeEEEEEecccCc
Q 021160 246 REDHSRITLT-PDVIMHVLRLQRRQT 270 (316)
Q Consensus 246 ~~~~~~~s~~-~d~~~~~w~~~~~~~ 270 (316)
++++++++-+ .+..|+.|++..+..
T Consensus 332 ~dG~lyvad~~~~~~I~~~~~~~G~v 357 (409)
T 3hrp_A 332 EDGNFYIVDGFKGYCLRKLDILDGYV 357 (409)
T ss_dssp TTCCEEEEETTTTCEEEEEETTTTEE
T ss_pred CCCCEEEEeCCCCCEEEEEECCCCEE
Confidence 7788888888 899999999766543
No 200
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.35 E-value=2.3e-11 Score=101.73 Aligned_cols=133 Identities=8% Similarity=-0.012 Sum_probs=99.5
Q ss_pred CccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEecC
Q 021160 33 NSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYND 112 (316)
Q Consensus 33 h~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d 112 (316)
+.. |+.++| ++ ++|+++ .++.|++||+.+... .... ..|...+.++.+.+.. +++...|
T Consensus 87 lp~-V~~l~f--d~-~~L~v~-~~~~l~v~dv~sl~~--------------~~~~-~~~~~~v~~i~~~~p~-~av~~~d 145 (388)
T 1xip_A 87 IPD-VIFVCF--HG-DQVLVS-TRNALYSLDLEELSE--------------FRTV-TSFEKPVFQLKNVNNT-LVILNSV 145 (388)
T ss_dssp CTT-EEEEEE--ET-TEEEEE-ESSEEEEEESSSTTC--------------EEEE-EECSSCEEEEEECSSE-EEEEETT
T ss_pred CCC-eeEEEE--CC-CEEEEE-cCCcEEEEEchhhhc--------------cCcc-ceeecceeeEEecCCC-EEEEECC
Confidence 456 999999 67 788888 889999999986541 1111 3345567787776653 5555789
Q ss_pred CcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCee--EEEe
Q 021160 113 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKL--VRLM 190 (316)
Q Consensus 113 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~--~~~~ 190 (316)
|.|.+||+..+ .... +... |.+++| +|+| ++.|..||.+++|+...++. ...+
T Consensus 146 G~L~v~dl~~~----------------~~~~----~~~~--Vs~v~W-SpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I 200 (388)
T 1xip_A 146 NDLSALDLRTK----------------STKQ----LAQN--VTSFDV-TNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEF 200 (388)
T ss_dssp SEEEEEETTTC----------------CEEE----EEES--EEEEEE-CSSE--EEEEETTSCEEEEEEETTEEEEEEEE
T ss_pred CCEEEEEccCC----------------cccc----ccCC--ceEEEE-cCCc--eEEEEcCCcEEEEcCCCcccccccee
Confidence 99999999876 2221 2333 999999 9999 67888999999999987775 5556
Q ss_pred ------e---cCccceEEEEEcCCCCeEEE
Q 021160 191 ------V---GDRHVVNQLEPHPHIPMFAT 211 (316)
Q Consensus 191 ------~---~~~~~v~~~~~~p~~~~l~s 211 (316)
. +|...|.+++|.+++.++++
T Consensus 201 ~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 201 SLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp CCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred cCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 2 36788999999999888765
No 201
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.33 E-value=4.2e-09 Score=85.45 Aligned_cols=194 Identities=6% Similarity=0.071 Sum_probs=130.4
Q ss_pred ccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEe-cC
Q 021160 34 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-ND 112 (316)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d 112 (316)
...+.++++++++ +++++...++.|..||.. ++.. .+ .. ......+..+++.++|+++++. .+
T Consensus 61 ~~~~~~i~~~~~g-~l~v~~~~~~~v~~~d~~-g~~~----------~~---~~-~~~~~~~~~i~~~~~g~l~v~~~~~ 124 (300)
T 2qc5_A 61 DAKVMCLIVSSLG-DIWFTENGANKIGKLSKK-GGFT----------EY---PL-PQPDSGPYGITEGLNGDIWFTQLNG 124 (300)
T ss_dssp TCCEEEEEECTTS-CEEEEETTTTEEEEECTT-SCEE----------EE---EC-SSTTCCEEEEEECSTTCEEEEETTT
T ss_pred CCcceeEEECCCC-CEEEEecCCCeEEEECCC-CCeE----------Ee---cC-CCCCCCCccceECCCCCEEEEccCC
Confidence 3568899999988 677776667889999987 5421 11 11 1223568899999999987775 47
Q ss_pred CcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCeeEEE-ee
Q 021160 113 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRL-MV 191 (316)
Q Consensus 113 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~-~~ 191 (316)
+.|..+|.. + +.. .+........+..+++ .+++++.++...++.|..++. +++.... +.
T Consensus 125 ~~i~~~~~~-g----------------~~~-~~~~~~~~~~~~~i~~-d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~ 184 (300)
T 2qc5_A 125 DRIGKLTAD-G----------------TIY-EYDLPNKGSYPAFITL-GSDNALWFTENQNNSIGRITN-TGKLEEYPLP 184 (300)
T ss_dssp TEEEEECTT-S----------------CEE-EEECSSTTCCEEEEEE-CTTSSEEEEETTTTEEEEECT-TCCEEEEECS
T ss_pred CeEEEECCC-C----------------CEE-EccCCCCCCCceeEEE-CCCCCEEEEecCCCeEEEECC-CCcEEEeeCC
Confidence 889999986 4 222 2221111123788998 899997777777889999998 5654432 22
Q ss_pred cCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCCCC--CCCCCcccceeeeecCCCCceeEEecCCCeEEEEEe
Q 021160 192 GDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFP--PLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRL 265 (316)
Q Consensus 192 ~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~ 265 (316)
.+...+..+++++++.++++....+.|.+|+. .+... .+......+..+. ..+++++.++...++.|..++.
T Consensus 185 ~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~-~d~~g~l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 185 TNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAIT-AGKNSEIWFTEWGANQIGRITN 258 (300)
T ss_dssp STTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEE-ECSTTCEEEEETTTTEEEEECT
T ss_pred CCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEE-ECCCCCEEEeccCCCeEEEECC
Confidence 33456889999999987777666778999998 33321 1222223333444 5667777777777788888886
No 202
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.31 E-value=8.7e-10 Score=90.29 Aligned_cols=201 Identities=10% Similarity=0.141 Sum_probs=130.1
Q ss_pred ceEEEEECCCCCcEEEE-------EecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccC-CCeE
Q 021160 36 RLNAIVIDPRNPNYFAV-------GGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNT-SELL 107 (316)
Q Consensus 36 ~v~~~~~~~~~~~~l~~-------g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l 107 (316)
...+++|++++ .++++ +..++.|.+||..+++.. .+..... .++...+..++++++ ++++
T Consensus 19 ~~~~~~~~~~g-~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~----------~~~~~~~-~~~~~~~~~i~~~~~~g~l~ 86 (314)
T 1pjx_A 19 GAEGPVFDKNG-DFYIVAPEVEVNGKPAGEILRIDLKTGKKT----------VICKPEV-NGYGGIPAGCQCDRDANQLF 86 (314)
T ss_dssp TCEEEEECTTS-CEEEEETTCEETTEECCEEEEECTTTCCEE----------EEECCEE-TTEECCEEEEEECSSSSEEE
T ss_pred CccCceECCCC-CEEEEEeccccCCCCCCEEEEEeCCCCcEE----------EEEeccc-CCCCCCCceEEEecCCCcEE
Confidence 56799999988 77777 577899999998877521 1111000 124467889999999 8877
Q ss_pred EEecCCcEEEEEcCCCCCCCCccCCccccccCCCcce-eeCC--cCCceeeeEEEecCCCcEEEEeccC-----------
Q 021160 108 ISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQV-YSGH--RNSQTVKGVNFFGPNDEYVMSGSDC----------- 173 (316)
Q Consensus 108 ~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~i~~~~~~~~~~~~l~~~~~d----------- 173 (316)
++.....|.+||.. + +.... .... .....+.++++ +++|.++++...+
T Consensus 87 v~~~~~~l~~~d~~-g----------------~~~~~~~~~~~~~~~~~~~~i~~-d~~g~l~v~~~~~~~~~~~~~~~~ 148 (314)
T 1pjx_A 87 VADMRLGLLVVQTD-G----------------TFEEIAKKDSEGRRMQGCNDCAF-DYEGNLWITAPAGEVAPADYTRSM 148 (314)
T ss_dssp EEETTTEEEEEETT-S----------------CEEECCSBCTTSCBCBCCCEEEE-CTTSCEEEEECBCBCTTSCCCBTT
T ss_pred EEECCCCEEEEeCC-C----------------CEEEEEeccCCCccccCCcCEEE-CCCCCEEEEecCcccccccccccc
Confidence 77655589999987 5 22111 1110 11123788998 8999888777655
Q ss_pred ----CeEEEEeccCCeeEEEeecCccceEEEEEc----CCCCeE-EEEeCCCcEEEecCC-CCC------CCCCCCCc-c
Q 021160 174 ----GHLFIWKKKGGKLVRLMVGDRHVVNQLEPH----PHIPMF-ATCGIEKTVKLWAPM-PTD------FPPLPDNA-E 236 (316)
Q Consensus 174 ----g~v~~wd~~~~~~~~~~~~~~~~v~~~~~~----p~~~~l-~s~~~d~~i~iwd~~-~~~------~~~~~~~~-~ 236 (316)
+.|..++.. ++..... .+......++|+ |+++.+ ++...++.|.+|++. .+. ...+..+. .
T Consensus 149 ~~~~~~l~~~~~~-g~~~~~~-~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~ 226 (314)
T 1pjx_A 149 QEKFGSIYCFTTD-GQMIQVD-TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEG 226 (314)
T ss_dssp SSSCEEEEEECTT-SCEEEEE-EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSC
T ss_pred cCCCCeEEEECCC-CCEEEec-cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCC
Confidence 578888876 5543332 333456889999 999764 454567899999976 332 11222222 2
Q ss_pred cceeeeecCCCCceeEEecCCCeEEEEEecccC
Q 021160 237 KIMKANKQGREDHSRITLTPDVIMHVLRLQRRQ 269 (316)
Q Consensus 237 ~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~ 269 (316)
....+ .+.+++++.++...++.|.+|+..+++
T Consensus 227 ~p~~i-~~d~~G~l~v~~~~~~~i~~~d~~~g~ 258 (314)
T 1pjx_A 227 GADGM-DFDEDNNLLVANWGSSHIEVFGPDGGQ 258 (314)
T ss_dssp EEEEE-EEBTTCCEEEEEETTTEEEEECTTCBS
T ss_pred CCCce-EECCCCCEEEEEcCCCEEEEEcCCCCc
Confidence 23233 356778888888788899999977443
No 203
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.29 E-value=8.4e-09 Score=83.66 Aligned_cols=194 Identities=9% Similarity=0.062 Sum_probs=132.3
Q ss_pred ccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEe-cC
Q 021160 34 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-ND 112 (316)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d 112 (316)
...+.++++++++ +++++...++.|.+||.. ++.. .+ .+ ......+..+++.++++++++. .+
T Consensus 19 ~~~p~~i~~d~~g-~l~v~~~~~~~v~~~~~~-~~~~----------~~---~~-~~~~~~~~~i~~~~~g~l~v~~~~~ 82 (300)
T 2qc5_A 19 DSGPYGITSSEDG-KVWFTQHKANKISSLDQS-GRIK----------EF---EV-PTPDAKVMCLIVSSLGDIWFTENGA 82 (300)
T ss_dssp TCCEEEEEECTTS-CEEEEETTTTEEEEECTT-SCEE----------EE---EC-SSTTCCEEEEEECTTSCEEEEETTT
T ss_pred CCCcceeeECCCC-CEEEEcCCCCeEEEECCC-CceE----------EE---EC-CCCCCcceeEEECCCCCEEEEecCC
Confidence 3467899999998 777777678999999987 5421 11 11 2233568899999999977775 47
Q ss_pred CcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCeeEEE-ee
Q 021160 113 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRL-MV 191 (316)
Q Consensus 113 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~-~~ 191 (316)
+.|..||.. + +. ..+........+.++++ .+++.++++...++.|..++.. ++.... +.
T Consensus 83 ~~v~~~d~~-g----------------~~-~~~~~~~~~~~~~~i~~-~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~ 142 (300)
T 2qc5_A 83 NKIGKLSKK-G----------------GF-TEYPLPQPDSGPYGITE-GLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLP 142 (300)
T ss_dssp TEEEEECTT-S----------------CE-EEEECSSTTCCEEEEEE-CSTTCEEEEETTTTEEEEECTT-SCEEEEECS
T ss_pred CeEEEECCC-C----------------Ce-EEecCCCCCCCCccceE-CCCCCEEEEccCCCeEEEECCC-CCEEEccCC
Confidence 889999987 4 22 22222111133889998 8899888887778899999987 665422 33
Q ss_pred cCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCCCCC--CCCCcccceeeeecCCCCceeEEecCCCeEEEEEe
Q 021160 192 GDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPP--LPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRL 265 (316)
Q Consensus 192 ~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~ 265 (316)
.....+..+++.++++++++...++.|..++. .++... +......+..+. ..+++.+.++....+.+.+++.
T Consensus 143 ~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~-~d~~g~l~v~~~~~~~i~~~~~ 216 (300)
T 2qc5_A 143 NKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGIT-SGNDGALWFVEIMGNKIGRITT 216 (300)
T ss_dssp STTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEE-ECTTSSEEEEETTTTEEEEECT
T ss_pred CCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEE-ECCCCCEEEEccCCCEEEEEcC
Confidence 33457889999999997777666788999998 444211 222222333333 5567777777777788888876
No 204
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.27 E-value=3.8e-09 Score=85.98 Aligned_cols=176 Identities=7% Similarity=0.062 Sum_probs=109.8
Q ss_pred ccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEe-cC
Q 021160 34 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-ND 112 (316)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d 112 (316)
...+.+++++|++ +++++ . +..|.+||..+++... +... ........+..+++.|+|+++++. ..
T Consensus 53 ~~~~~~i~~~~dG-~l~v~-~-~~~l~~~d~~~g~~~~----------~~~~-~~~~~~~~~~di~~d~dG~l~~~~~~~ 118 (297)
T 3g4e_A 53 DAPVSSVALRQSG-GYVAT-I-GTKFCALNWKEQSAVV----------LATV-DNDKKNNRFNDGKVDPAGRYFAGTMAE 118 (297)
T ss_dssp SSCEEEEEEBTTS-SEEEE-E-TTEEEEEETTTTEEEE----------EEEC-CTTCSSEEEEEEEECTTSCEEEEEEEC
T ss_pred CCceEEEEECCCC-CEEEE-E-CCeEEEEECCCCcEEE----------EEec-CCCCCCCCCCCEEECCCCCEEEecCCc
Confidence 4578999999999 65544 3 5689999998775311 1000 001123457899999999977764 21
Q ss_pred ---------CcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEE-EEeccCCeEEEEec-
Q 021160 113 ---------ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYV-MSGSDCGHLFIWKK- 181 (316)
Q Consensus 113 ---------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l-~~~~~dg~v~~wd~- 181 (316)
..-.+|.+... .....+...... ...++| +|+++.+ ++.+.++.|..|++
T Consensus 119 ~~~~~~~~~~~~~l~~~d~~----------------g~~~~~~~~~~~--pngi~~-spdg~~lyv~~~~~~~i~~~~~d 179 (297)
T 3g4e_A 119 ETAPAVLERHQGALYSLFPD----------------HHVKKYFDQVDI--SNGLDW-SLDHKIFYYIDSLSYSVDAFDYD 179 (297)
T ss_dssp CSBTTBCCTTCEEEEEECTT----------------SCEEEEEEEESB--EEEEEE-CTTSCEEEEEEGGGTEEEEEEEC
T ss_pred ccccccccCCCcEEEEEECC----------------CCEEEEeecccc--ccceEE-cCCCCEEEEecCCCCcEEEEecc
Confidence 23345554422 112222222222 678998 9999866 55566889999987
Q ss_pred -cCCeeE-----EEeecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC-CCCCCCCcccceeee
Q 021160 182 -KGGKLV-----RLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD-FPPLPDNAEKIMKAN 242 (316)
Q Consensus 182 -~~~~~~-----~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~ 242 (316)
.++... ..+..+...+..+++.++|++.++....+.|..||..+++ +..+..+...+..++
T Consensus 180 ~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~ 247 (297)
T 3g4e_A 180 LQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCC 247 (297)
T ss_dssp TTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEE
T ss_pred CCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEE
Confidence 455432 2233344567899999999888877778889999998665 333332323343443
No 205
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.26 E-value=2.9e-09 Score=86.73 Aligned_cols=226 Identities=9% Similarity=0.008 Sum_probs=139.8
Q ss_pred ceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEecCCcE
Q 021160 36 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDELV 115 (316)
Q Consensus 36 ~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d~~i 115 (316)
-.-+..|+|++..++++...++.|..||..+++.. . ......+.+++++++|+++++. +..|
T Consensus 14 ~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~----------~-------~~~~~~~~~i~~~~dG~l~v~~-~~~l 75 (297)
T 3g4e_A 14 CGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ----------R-------VTMDAPVSSVALRQSGGYVATI-GTKF 75 (297)
T ss_dssp BEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE----------E-------EECSSCEEEEEEBTTSSEEEEE-TTEE
T ss_pred cccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE----------E-------EeCCCceEEEEECCCCCEEEEE-CCeE
Confidence 34588999976477788888899999999876521 0 1123568899999999966665 6789
Q ss_pred EEEEcCCCCCCCCccCCccccccCCCcceeeCC---cCCceeeeEEEecCCCcEEEEecc-----------CCeEEEEec
Q 021160 116 YLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGH---RNSQTVKGVNFFGPNDEYVMSGSD-----------CGHLFIWKK 181 (316)
Q Consensus 116 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~l~~~~~-----------dg~v~~wd~ 181 (316)
.+||..++ +. ..+... .....+.++++ +++|+++++... .+.|+.++.
T Consensus 76 ~~~d~~~g----------------~~-~~~~~~~~~~~~~~~~di~~-d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~ 137 (297)
T 3g4e_A 76 CALNWKEQ----------------SA-VVLATVDNDKKNNRFNDGKV-DPAGRYFAGTMAEETAPAVLERHQGALYSLFP 137 (297)
T ss_dssp EEEETTTT----------------EE-EEEEECCTTCSSEEEEEEEE-CTTSCEEEEEEECCSBTTBCCTTCEEEEEECT
T ss_pred EEEECCCC----------------cE-EEEEecCCCCCCCCCCCEEE-CCCCCEEEecCCcccccccccCCCcEEEEEEC
Confidence 99998765 22 222211 11123788998 899997765432 234555554
Q ss_pred cCCeeEEEeecCccceEEEEEcCCCCeE-EEEeCCCcEEEecCC--CCCC------CCCCCCcccceeeeecCCCCceeE
Q 021160 182 KGGKLVRLMVGDRHVVNQLEPHPHIPMF-ATCGIEKTVKLWAPM--PTDF------PPLPDNAEKIMKANKQGREDHSRI 252 (316)
Q Consensus 182 ~~~~~~~~~~~~~~~v~~~~~~p~~~~l-~s~~~d~~i~iwd~~--~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 252 (316)
. ++... +..+....+.++|+|+++.| ++.+.++.|.+|++. ++.+ ..+.........+ ...+++++.+
T Consensus 138 ~-g~~~~-~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~-~~d~~G~lwv 214 (297)
T 3g4e_A 138 D-HHVKK-YFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGM-CIDAEGKLWV 214 (297)
T ss_dssp T-SCEEE-EEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEE-EEBTTSCEEE
T ss_pred C-CCEEE-EeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCee-EECCCCCEEE
Confidence 3 44332 33333456889999999875 555667899999863 4332 1122111222223 3567788888
Q ss_pred EecCCCeEEEEEecccCcceeEEee-ccccccccc-CCCCeEEEEeccCC
Q 021160 253 TLTPDVIMHVLRLQRRQTLAYRERR-YNAADFESD-EEEGETYLLGFSDS 300 (316)
Q Consensus 253 s~~~d~~~~~w~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~v~~~~~~~~ 300 (316)
+....+.|..|+..+++........ .....++.+ .+..++|+.....+
T Consensus 215 a~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~~~~ 264 (297)
T 3g4e_A 215 ACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCARDG 264 (297)
T ss_dssp EEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEEBCTT
T ss_pred EEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEcCCcC
Confidence 8888888999988766544333221 223334433 44456777766544
No 206
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.26 E-value=1.1e-09 Score=93.23 Aligned_cols=181 Identities=10% Similarity=0.012 Sum_probs=112.9
Q ss_pred eeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCC--cEEEEeCcCCcccCCCCCCCCce
Q 021160 3 LFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDE--YARVYDIRKCHWYSPISSDTPVD 80 (316)
Q Consensus 3 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg--~v~~wd~~~~~~~~~~~~~~~~~ 80 (316)
+.|++||+.+......... ..... ++|+|++ ..++++..++ .|.+++...+... .
T Consensus 152 ~~I~~id~~~g~~~~~~~~------------~~~~~-ia~~~~g-~~l~~~d~~~~~~I~~~d~~~~~~~---------~ 208 (409)
T 3hrp_A 152 PRVRLISVDDNKVTTVHPG------------FKGGK-PAVTKDK-QRVYSIGWEGTHTVYVYMKASGWAP---------T 208 (409)
T ss_dssp TEEEEEETTTTEEEEEEET------------CCBCB-CEECTTS-SEEEEEBSSTTCEEEEEEGGGTTCE---------E
T ss_pred CcEEEEECCCCEEEEeecc------------CCCCc-eeEecCC-CcEEEEecCCCceEEEEEcCCCcee---------E
Confidence 4677888765544323221 11223 8999998 6777777655 7888887654310 0
Q ss_pred ecccccccCCCcccEEEEEEcc-CCCeEEEecCCcEEEEEcCCCCCCCCccCCccccccCCCccee-----eCCcCCcee
Q 021160 81 TFCPRHLIGKNNIHITGLAYSN-TSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVY-----SGHRNSQTV 154 (316)
Q Consensus 81 ~~~~~~~~~~~~~~i~~~~~~~-~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~i 154 (316)
. ...........+.+++++| ++.++++..++.|+.||..++ . ...+ .+.....+.
T Consensus 209 ~--~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~----------------~-~~~~~~~~~~g~~~~~P~ 269 (409)
T 3hrp_A 209 R--IGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQ----------------E-VTLIKQLELSGSLGTNPG 269 (409)
T ss_dssp E--EEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTC----------------C-EEEEEECCCCSCCCCSSC
T ss_pred E--eeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCC----------------C-EEEEecccccCCCCCCcc
Confidence 0 0000011234567899999 556666556889999998765 2 2222 111111001
Q ss_pred eeEEEecC-CCcEEEEeccCCeEEEEeccCCeeEEEeecCc---------------cceEEEEEcCCCCeEEEEe-CCCc
Q 021160 155 KGVNFFGP-NDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR---------------HVVNQLEPHPHIPMFATCG-IEKT 217 (316)
Q Consensus 155 ~~~~~~~~-~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~~---------------~~v~~~~~~p~~~~l~s~~-~d~~ 217 (316)
..++| +| ++.++++-..++.|+.|+.... +..+.++. .....++++|+++++++-. .++.
T Consensus 270 ~~ia~-~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~ 346 (409)
T 3hrp_A 270 PYLIY-YFVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYC 346 (409)
T ss_dssp CEEEE-ETTTTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCE
T ss_pred ccEEE-eCCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCE
Confidence 28998 78 5666777777899999997643 33333322 3478899999999888877 7899
Q ss_pred EEEecCCCCCC
Q 021160 218 VKLWAPMPTDF 228 (316)
Q Consensus 218 i~iwd~~~~~~ 228 (316)
|+.|++..+.+
T Consensus 347 I~~~~~~~G~v 357 (409)
T 3hrp_A 347 LRKLDILDGYV 357 (409)
T ss_dssp EEEEETTTTEE
T ss_pred EEEEECCCCEE
Confidence 99999766553
No 207
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.25 E-value=2.3e-09 Score=94.73 Aligned_cols=190 Identities=9% Similarity=-0.009 Sum_probs=130.3
Q ss_pred CCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEE-ecCCcEEEEEcC
Q 021160 43 DPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLIS-YNDELVYLFEKN 121 (316)
Q Consensus 43 ~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s-~~d~~i~iwd~~ 121 (316)
+|.+ .++++...++.|.++|..++++. ..+.. ...+..+.|+|+|+++.. +.|+.|.+||+.
T Consensus 164 d~~~-~~~V~~~~~~~V~viD~~t~~v~--------------~~i~~--g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~ 226 (567)
T 1qks_A 164 DLEN-LFSVTLRDAGQIALIDGSTYEIK--------------TVLDT--GYAVHISRLSASGRYLFVIGRDGKVNMIDLW 226 (567)
T ss_dssp CGGG-EEEEEETTTTEEEEEETTTCCEE--------------EEEEC--SSCEEEEEECTTSCEEEEEETTSEEEEEETT
T ss_pred CCCc-eEEEEeCCCCeEEEEECCCCeEE--------------EEEeC--CCCccceEECCCCCEEEEEcCCCeEEEEECC
Confidence 3444 56777778999999999988732 22211 224568999999996665 578999999995
Q ss_pred --CCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEec----CCCcEEEEecc-CCeEEEEeccCCeeEEEeecC-
Q 021160 122 --MGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFG----PNDEYVMSGSD-CGHLFIWKKKGGKLVRLMVGD- 193 (316)
Q Consensus 122 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~l~~~~~-dg~v~~wd~~~~~~~~~~~~~- 193 (316)
+. +.+..+.... ....++| + |+|+++++++. ++.+.++|..+.+.+..+...
T Consensus 227 ~~t~----------------~~v~~i~~G~---~P~~ia~-s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~ 286 (567)
T 1qks_A 227 MKEP----------------TTVAEIKIGS---EARSIET-SKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRG 286 (567)
T ss_dssp SSSC----------------CEEEEEECCS---EEEEEEE-CCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCE
T ss_pred CCCC----------------cEeEEEecCC---CCceeEE-ccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccc
Confidence 44 4455555422 2678998 7 69998888775 589999999999988876532
Q ss_pred ---------c-cceEEEEEcCCCCe-EEEEeCCCcEEEecCCCCC---CCCCCCCcccceeeeecCCCCceeE-EecCCC
Q 021160 194 ---------R-HVVNQLEPHPHIPM-FATCGIEKTVKLWAPMPTD---FPPLPDNAEKIMKANKQGREDHSRI-TLTPDV 258 (316)
Q Consensus 194 ---------~-~~v~~~~~~p~~~~-l~s~~~d~~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-s~~~d~ 258 (316)
. ..+..+..+++++. ++....+|.|.++|..... ...+. ..... ....+.+++++++ +...++
T Consensus 287 ~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~-~~~~~-~d~~~~pdgr~~~va~~~sn 364 (567)
T 1qks_A 287 MTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEIS-AERFL-HDGGLDGSHRYFITAANARN 364 (567)
T ss_dssp ECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEE-CCSSE-EEEEECTTSCEEEEEEGGGT
T ss_pred cccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeee-ccccc-cCceECCCCCEEEEEeCCCC
Confidence 1 25778888888776 5555677999999987643 11110 11111 2223677777765 455679
Q ss_pred eEEEEEecccCcc
Q 021160 259 IMHVLRLQRRQTL 271 (316)
Q Consensus 259 ~~~~w~~~~~~~~ 271 (316)
.|.++|+.+++..
T Consensus 365 ~V~ViD~~t~kl~ 377 (567)
T 1qks_A 365 KLVVIDTKEGKLV 377 (567)
T ss_dssp EEEEEETTTTEEE
T ss_pred eEEEEECCCCcEE
Confidence 9999999877543
No 208
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.23 E-value=6.2e-09 Score=85.91 Aligned_cols=223 Identities=9% Similarity=-0.010 Sum_probs=135.0
Q ss_pred eEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEecCCcEE
Q 021160 37 LNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDELVY 116 (316)
Q Consensus 37 v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d~~i~ 116 (316)
..+..|+|++..++++...++.|..||..+++.. . . .....+.+++++++|+++++..+ .|.
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~----------~-----~--~~~~~v~~i~~~~dg~l~v~~~~-gl~ 112 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKT----------V-----H--ALPFMGSALAKISDSKQLIASDD-GLF 112 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE----------E-----E--ECSSCEEEEEEEETTEEEEEETT-EEE
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE----------E-----E--ECCCcceEEEEeCCCeEEEEECC-CEE
Confidence 4678999986577788878899999999876521 0 1 11346889999999998877644 499
Q ss_pred EEEcCCCCCCCCccCCccccccCCCcceeeCCc---CCceeeeEEEecCCCcEEEEecc------CCeEEEEeccCCeeE
Q 021160 117 LFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHR---NSQTVKGVNFFGPNDEYVMSGSD------CGHLFIWKKKGGKLV 187 (316)
Q Consensus 117 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~l~~~~~------dg~v~~wd~~~~~~~ 187 (316)
+||..++ +. ..+.... ....+.++++ +++|+++++... .+.|+.++ +++..
T Consensus 113 ~~d~~~g----------------~~-~~~~~~~~~~~~~~~~~i~~-d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~ 172 (326)
T 2ghs_A 113 LRDTATG----------------VL-TLHAELESDLPGNRSNDGRM-HPSGALWIGTMGRKAETGAGSIYHVA--KGKVT 172 (326)
T ss_dssp EEETTTC----------------CE-EEEECSSTTCTTEEEEEEEE-CTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE
T ss_pred EEECCCC----------------cE-EEEeeCCCCCCCCCCCCEEE-CCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE
Confidence 9998776 22 2222111 1123788998 899987765442 24566666 56543
Q ss_pred EEeecCccceEEEEEcCCCCeEE-EEeCCCcEEEecCC--CC-CCC------CCCCCcccceeeeecCCCCceeEEecCC
Q 021160 188 RLMVGDRHVVNQLEPHPHIPMFA-TCGIEKTVKLWAPM--PT-DFP------PLPDNAEKIMKANKQGREDHSRITLTPD 257 (316)
Q Consensus 188 ~~~~~~~~~v~~~~~~p~~~~l~-s~~~d~~i~iwd~~--~~-~~~------~~~~~~~~~~~~~~~~~~~~~~~s~~~d 257 (316)
. +..+......++|+|+++.++ +.+.++.|.+|++. ++ .+. .+....... .......++.+.++...+
T Consensus 173 ~-~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p-~gi~~d~~G~lwva~~~~ 250 (326)
T 2ghs_A 173 K-LFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGM-DGSVCDAEGHIWNARWGE 250 (326)
T ss_dssp E-EEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEE-EEEEECTTSCEEEEEETT
T ss_pred E-eeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCC-CeeEECCCCCEEEEEeCC
Confidence 3 323334567899999998754 44567899999985 44 321 111111112 223356677777777667
Q ss_pred CeEEEEEecccCcceeEEe-eccccccccc-CCCCeEEEEeccCC
Q 021160 258 VIMHVLRLQRRQTLAYRER-RYNAADFESD-EEEGETYLLGFSDS 300 (316)
Q Consensus 258 ~~~~~w~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~v~~~~~~~~ 300 (316)
+.|..|+.. ++....... ......++.+ .+.+.+|+.....+
T Consensus 251 ~~v~~~d~~-g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~~~ 294 (326)
T 2ghs_A 251 GAVDRYDTD-GNHIARYEVPGKQTTCPAFIGPDASRLLVTSAREH 294 (326)
T ss_dssp TEEEEECTT-CCEEEEEECSCSBEEEEEEESTTSCEEEEEEBCTT
T ss_pred CEEEEECCC-CCEEEEEECCCCCcEEEEEecCCCCEEEEEecCCC
Confidence 888888863 332222211 1112333333 44456776655544
No 209
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.21 E-value=1.4e-09 Score=100.02 Aligned_cols=221 Identities=6% Similarity=-0.071 Sum_probs=131.9
Q ss_pred eeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCC--------------cEEEEeCcCCc
Q 021160 3 LFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDE--------------YARVYDIRKCH 68 (316)
Q Consensus 3 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg--------------~v~~wd~~~~~ 68 (316)
..|++||+.+.+.... ... ...+..++|+|+ +.|+.++.++ .|++|++.++.
T Consensus 189 ~~i~v~dl~tg~~~~~-~~~-----------~~~~~~~~wspD--~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~ 254 (741)
T 1yr2_A 189 RTVKFVGVADGKPLAD-ELK-----------WVKFSGLAWLGN--DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQ 254 (741)
T ss_dssp EEEEEEETTTCCEEEE-EEE-----------EEESCCCEESTT--SEEEEEECCCC--------CCCCCEEEEEETTSCG
T ss_pred EEEEEEECCCCCCCCc-cCC-----------CceeccEEEECC--CEEEEEEecCcccccccccCCCCCEEEEEECCCCc
Confidence 4699999988765432 111 122357899998 3555555444 38889987664
Q ss_pred ccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEE-ecC-----CcEEEEEcCCCCCCCCccCCccccccCCC-
Q 021160 69 WYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLIS-YND-----ELVYLFEKNMGLGPSPLSLSPEDLQKREE- 141 (316)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s-~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~- 141 (316)
.. .. ..... ..+...+..+.|+|+|++|+. +.+ ..|++||+.++. ..
T Consensus 255 ~~-------~~---lv~~~-~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~---------------~~~ 308 (741)
T 1yr2_A 255 SA-------DQ---PVFAT-PELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGK---------------IGP 308 (741)
T ss_dssp GG-------CE---EEECC-TTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTE---------------ECC
T ss_pred hh-------CE---EEecc-CCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCC---------------Ccc
Confidence 10 00 00011 223345889999999996665 333 379999987641 12
Q ss_pred cceeeCCcCCceeeeEEEecCCCcEEEEecc----CCeEEEEeccCC--eeEEEeecCccceEEEEEcCCCCeEEEEeCC
Q 021160 142 PQVYSGHRNSQTVKGVNFFGPNDEYVMSGSD----CGHLFIWKKKGG--KLVRLMVGDRHVVNQLEPHPHIPMFATCGIE 215 (316)
Q Consensus 142 ~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~----dg~v~~wd~~~~--~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d 215 (316)
...+..+... .... + .++++.|+..+. ++.|++||+.++ +....+..+...+..++|+ ++.++++...|
T Consensus 309 ~~~l~~~~~~--~~~~-~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~d 383 (741)
T 1yr2_A 309 VTALIPDLKA--QWDF-V-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHD 383 (741)
T ss_dssp CEEEECSSSS--CEEE-E-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEET
T ss_pred cEEecCCCCc--eEEE-E-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEEC
Confidence 4455555433 4433 3 477888877765 456999999874 4444445555567778887 55668888889
Q ss_pred CcEEEecC--CCCCCCCCCCC-cccceeeeecCCCCceeE-E---ecCCCeEEEEEecccC
Q 021160 216 KTVKLWAP--MPTDFPPLPDN-AEKIMKANKQGREDHSRI-T---LTPDVIMHVLRLQRRQ 269 (316)
Q Consensus 216 ~~i~iwd~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-s---~~~d~~~~~w~~~~~~ 269 (316)
+..+||.+ .++....+..+ ...+.... +++++..++ + ....+.+..||+.+++
T Consensus 384 g~~~l~~~~~~g~~~~~l~~~~~~~v~~~~-~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 384 AKSQVLAFDLDGKPAGAVSLPGIGSASGLS-GRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp TEEEEEEEETTSCEEEECBCSSSCEEEEEE-CCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred CEEEEEEEeCCCCceeeccCCCCeEEEEee-cCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 88777754 33333333322 23333333 555555443 3 3334889999987654
No 210
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.17 E-value=1.1e-08 Score=84.37 Aligned_cols=154 Identities=9% Similarity=-0.028 Sum_probs=99.7
Q ss_pred cceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccC-CCcccEEEEEEccCCCeEEEec--
Q 021160 35 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIG-KNNIHITGLAYSNTSELLISYN-- 111 (316)
Q Consensus 35 ~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~s~~-- 111 (316)
..+.+++|+|++ +++++. . ..|.+||..+++.. .+. .... .....+..++++|+|+++++..
T Consensus 90 ~~v~~i~~~~dg-~l~v~~-~-~gl~~~d~~~g~~~----------~~~--~~~~~~~~~~~~~i~~d~~G~l~v~~~~~ 154 (326)
T 2ghs_A 90 FMGSALAKISDS-KQLIAS-D-DGLFLRDTATGVLT----------LHA--ELESDLPGNRSNDGRMHPSGALWIGTMGR 154 (326)
T ss_dssp SCEEEEEEEETT-EEEEEE-T-TEEEEEETTTCCEE----------EEE--CSSTTCTTEEEEEEEECTTSCEEEEEEET
T ss_pred CcceEEEEeCCC-eEEEEE-C-CCEEEEECCCCcEE----------EEe--eCCCCCCCCCCCCEEECCCCCEEEEeCCC
Confidence 468999999998 666544 4 44999998877521 000 0001 1134688999999999777643
Q ss_pred -----CCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEE-eccCCeEEEEecc--C
Q 021160 112 -----DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMS-GSDCGHLFIWKKK--G 183 (316)
Q Consensus 112 -----d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~-~~~dg~v~~wd~~--~ 183 (316)
.+.|+.++ .+ + ...+...... ...++| +++++.++. .+.++.|.+|++. +
T Consensus 155 ~~~~~~~~l~~~~--~g----------------~-~~~~~~~~~~--~~~i~~-s~dg~~lyv~~~~~~~I~~~d~~~~~ 212 (326)
T 2ghs_A 155 KAETGAGSIYHVA--KG----------------K-VTKLFADISI--PNSICF-SPDGTTGYFVDTKVNRLMRVPLDART 212 (326)
T ss_dssp TCCTTCEEEEEEE--TT----------------E-EEEEEEEESS--EEEEEE-CTTSCEEEEEETTTCEEEEEEBCTTT
T ss_pred cCCCCceEEEEEe--CC----------------c-EEEeeCCCcc--cCCeEE-cCCCCEEEEEECCCCEEEEEEccccc
Confidence 24455555 33 2 2222222222 678898 999986654 4567899999986 5
Q ss_pred C-ee-----EEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCC
Q 021160 184 G-KL-----VRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMP 225 (316)
Q Consensus 184 ~-~~-----~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~ 225 (316)
+ +. ...+......+..+++.+++.+.++...++.|.+|+...
T Consensus 213 Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~g 260 (326)
T 2ghs_A 213 GLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTDG 260 (326)
T ss_dssp CCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTTC
T ss_pred CCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCCC
Confidence 6 32 222323345678899999998877766678899999854
No 211
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.14 E-value=9.6e-08 Score=80.21 Aligned_cols=252 Identities=10% Similarity=-0.050 Sum_probs=143.8
Q ss_pred eeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEe----------cCCcEEEEeCcCCcccCCC
Q 021160 4 FNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGG----------SDEYARVYDIRKCHWYSPI 73 (316)
Q Consensus 4 ~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~----------~dg~v~~wd~~~~~~~~~~ 73 (316)
.|.++|+.+.+....+... ..+ .++++|++ +.++++. .++.|.+||..+.+....+
T Consensus 48 ~v~v~D~~t~~~~~~i~~g-----------~~p--~i~~spDg-~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i 113 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGG-----------FLP--NPVAAHSG-SEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADI 113 (373)
T ss_pred EEEEEECCCCeEEEEecCC-----------CCC--CeEECCCC-CEEEEEeccccccccCCCCCeEEEEECCCCcEEEEE
Confidence 6889998876654333221 123 89999999 6666664 3678999999877643221
Q ss_pred CCCCCceecccccccCCCcccEEEEEEccCCCeEEEe--c-CCcEEEEEcCCCCCCCCccCCccccccCCCcce-eeCCc
Q 021160 74 SSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY--N-DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQV-YSGHR 149 (316)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~--~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 149 (316)
.... .... . +......++|+|+|++|+.+ . ++.|.++| .++ +.+.. +....
T Consensus 114 ~~~~------~~~~-~-~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~----------------~~~~~~i~~~~ 168 (373)
T 2mad_H 114 ELPD------APRF-D-VGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGG----------------SSDDQLLSSPT 168 (373)
T ss_pred ECCC------cccc-c-cCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCC----------------CEEeEEcCCCc
Confidence 1100 0000 0 01223478999999966653 2 57899999 877 44444 33211
Q ss_pred CCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCeeEEEee-----cCccc-eEEEEEcCCCCeEEEEeCCCcEEEecC
Q 021160 150 NSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMV-----GDRHV-VNQLEPHPHIPMFATCGIEKTVKLWAP 223 (316)
Q Consensus 150 ~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~-----~~~~~-v~~~~~~p~~~~l~s~~~d~~i~iwd~ 223 (316)
++.+.+.....+++.+.||.+.+++. +++...... ....+ .....+.+++..++..+..+.+.+.|+
T Consensus 169 ------~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~ 241 (373)
T 2mad_H 169 ------CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADI 241 (373)
T ss_pred ------eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEec
Confidence 13332333455667778999999999 887663322 11112 123456666655444456788999998
Q ss_pred CCCCC---CCCCCC----------cccceeeeecCCCCceeEE-ec---------CCCeEEEEEecccCcceeE------
Q 021160 224 MPTDF---PPLPDN----------AEKIMKANKQGREDHSRIT-LT---------PDVIMHVLRLQRRQTLAYR------ 274 (316)
Q Consensus 224 ~~~~~---~~~~~~----------~~~~~~~~~~~~~~~~~~s-~~---------~d~~~~~w~~~~~~~~~~~------ 274 (316)
..... ..+.-. .... .....++++..+.. .. ..+.|.++|+.+.+.....
T Consensus 242 ~~~~~~v~~~~~~~~~~~~~~~~~p~g~-~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p 320 (373)
T 2mad_H 242 SAAGATNKAPIDALSGGRKADTWRPGGW-QQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDV 320 (373)
T ss_pred cCCcceEeeeeeecCCcccccceecCce-EeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCCc
Confidence 75431 111100 0111 11224555444443 32 2357899998876443222
Q ss_pred ---Eeecccc-cccccC-CCCeEEEEeccCCCC
Q 021160 275 ---ERRYNAA-DFESDE-EEGETYLLGFSDSDA 302 (316)
Q Consensus 275 ---~~~~~~~-~~~~~~-~~~~v~~~~~~~~~~ 302 (316)
.+++++. .+.... .++.|.++|...++.
T Consensus 321 ~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~v 353 (373)
T 2mad_H 321 DAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQ 353 (373)
T ss_pred CeEEECCCCCeEEEEEcCCCCeEEEEECCCCCE
Confidence 4666665 444443 577899999887764
No 212
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.14 E-value=2.5e-08 Score=83.18 Aligned_cols=219 Identities=9% Similarity=-0.053 Sum_probs=130.8
Q ss_pred EEECCCCCcEEEEEec-----CCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEE-e---
Q 021160 40 IVIDPRNPNYFAVGGS-----DEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLIS-Y--- 110 (316)
Q Consensus 40 ~~~~~~~~~~l~~g~~-----dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s-~--- 110 (316)
....|++ ..+++... ++.|.++|..+++.. ..+..+ ..+ . ++++|+|+.+.. .
T Consensus 38 ~~~~pd~-~~vyV~~~~~~~~~~~V~ViD~~t~~v~--------------~~I~vG-~~P-~-va~spDG~~lyVan~~~ 99 (386)
T 3sjl_D 38 EAPAPDA-RRVYVNDPAHFAAVTQQFVIDGEAGRVI--------------GMIDGG-FLP-N-PVVADDGSFIAHASTVF 99 (386)
T ss_dssp CCCCCCT-TEEEEEECGGGCSSEEEEEEETTTTEEE--------------EEEEEC-SSC-E-EEECTTSSCEEEEEEEE
T ss_pred eccCCCC-CEEEEEcCcccCCCCEEEEEECCCCeEE--------------EEEECC-CCC-c-EEECCCCCEEEEEcccc
Confidence 4557888 55555543 689999999988732 222122 223 3 999999985544 3
Q ss_pred -------cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCc-----CCceeeeEEEecCCCcEEEEecc--CCeE
Q 021160 111 -------NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHR-----NSQTVKGVNFFGPNDEYVMSGSD--CGHL 176 (316)
Q Consensus 111 -------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~i~~~~~~~~~~~~l~~~~~--dg~v 176 (316)
.++.|.+||..+. +.+..+.... .......+.+ +|+|++++++.. ++.|
T Consensus 100 ~r~~~G~~~~~VsviD~~t~----------------~v~~~I~v~~g~r~~~g~~P~~~a~-spDGk~lyVan~~~~~~V 162 (386)
T 3sjl_D 100 SRIARGERTDYVEVFDPVTL----------------LPTADIELPDAPRFLVGTYPWMTSL-TPDGKTLLFYQFSPAPAV 162 (386)
T ss_dssp EETTEEEEEEEEEEECTTTC----------------CEEEEEEETTCCCCCBSCCGGGEEE-CTTSSEEEEEECSSSCEE
T ss_pred cccccCCCCCEEEEEECCCC----------------eEEEEEECCCccccccCCCCceEEE-cCCCCEEEEEEcCCCCeE
Confidence 2577999999887 5555554221 0112567888 999999988864 6899
Q ss_pred EEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCC-CCC-----CCCCCCccccee-eeecCCCCc
Q 021160 177 FIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMP-TDF-----PPLPDNAEKIMK-ANKQGREDH 249 (316)
Q Consensus 177 ~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~-~~~-----~~~~~~~~~~~~-~~~~~~~~~ 249 (316)
.++|+.+++.+.++..... ...+....+.+++.+.||++.+.++.. +++ ..+......+.. ..+..++++
T Consensus 163 sVID~~t~~vv~tI~v~g~---~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~ 239 (386)
T 3sjl_D 163 GVVDLEGKAFKRMLDVPDC---YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGR 239 (386)
T ss_dssp EEEETTTTEEEEEEECCSE---EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTE
T ss_pred EEEECCCCcEEEEEECCCc---ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCc
Confidence 9999999999988864321 122322334566777788877777765 332 111111122211 121234565
Q ss_pred eeEEecCCCeEEEEEecccCcceeEE------------eeccc-ccccccCCCCeEEEEec
Q 021160 250 SRITLTPDVIMHVLRLQRRQTLAYRE------------RRYNA-ADFESDEEEGETYLLGF 297 (316)
Q Consensus 250 ~~~s~~~d~~~~~w~~~~~~~~~~~~------------~~~~~-~~~~~~~~~~~v~~~~~ 297 (316)
+++ .+.++.+.+.|+.......... +.|.+ ..++.+.+.+++|+..-
T Consensus 240 ~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~ 299 (386)
T 3sjl_D 240 LVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVD 299 (386)
T ss_dssp EEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEE
T ss_pred EEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEec
Confidence 444 5558999999987653221111 12222 33444566777777654
No 213
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.13 E-value=1.7e-08 Score=84.18 Aligned_cols=255 Identities=10% Similarity=-0.008 Sum_probs=147.6
Q ss_pred CceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEe----------cCCcEEEEeCcCCccc
Q 021160 1 MVLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGG----------SDEYARVYDIRKCHWY 70 (316)
Q Consensus 1 ~~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~----------~dg~v~~wd~~~~~~~ 70 (316)
|.+.|.+.|..+.+....+... ..+ . ++++|++ ++++++. .++.|.+||..+.+..
T Consensus 57 ~~~~V~ViD~~t~~v~~~I~vG-----------~~P-~-va~spDG-~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~ 122 (386)
T 3sjl_D 57 AVTQQFVIDGEAGRVIGMIDGG-----------FLP-N-PVVADDG-SFIAHASTVFSRIARGERTDYVEVFDPVTLLPT 122 (386)
T ss_dssp SSEEEEEEETTTTEEEEEEEEC-----------SSC-E-EEECTTS-SCEEEEEEEEEETTEEEEEEEEEEECTTTCCEE
T ss_pred CCCEEEEEECCCCeEEEEEECC-----------CCC-c-EEECCCC-CEEEEEcccccccccCCCCCEEEEEECCCCeEE
Confidence 3678999999888776666543 223 4 9999999 5555543 3678999999988743
Q ss_pred CCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEE-e-c-CCcEEEEEcCCCCCCCCccCCccccccCCCcceeeC
Q 021160 71 SPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLIS-Y-N-DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSG 147 (316)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s-~-~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (316)
..+..+.. .. .........++++|+|+++.. . . ++.|.++|+.++ +.+..+..
T Consensus 123 ~~I~v~~g------~r--~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~----------------~vv~tI~v 178 (386)
T 3sjl_D 123 ADIELPDA------PR--FLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGK----------------AFKRMLDV 178 (386)
T ss_dssp EEEEETTC------CC--CCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTT----------------EEEEEEEC
T ss_pred EEEECCCc------cc--cccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCC----------------cEEEEEEC
Confidence 22110000 00 000113346899999996554 3 2 689999999987 56666643
Q ss_pred CcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccC-CeeEEEeecC----ccce-EEEEEc-CCCCeEEEEeCCCcEEE
Q 021160 148 HRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKG-GKLVRLMVGD----RHVV-NQLEPH-PHIPMFATCGIEKTVKL 220 (316)
Q Consensus 148 ~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~-~~~~~~~~~~----~~~v-~~~~~~-p~~~~l~s~~~d~~i~i 220 (316)
.. . ...+ +...+.+++.+.||.+.+.++.+ ++.......+ ...+ ...+|. ++++++. .+.+|.|.+
T Consensus 179 ~g----~-~~~~-P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v 251 (386)
T 3sjl_D 179 PD----C-YHIF-PTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQ 251 (386)
T ss_dssp CS----E-EEEE-EEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEE
T ss_pred CC----c-ceee-cCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEE
Confidence 21 1 1223 55566777888899998999876 5653322111 1122 124564 6775544 556899999
Q ss_pred ecCCCCCCCCCCCC-------------cccceeeeecCCC-CceeEEec---------CCCeEEEEEecccCcceeE---
Q 021160 221 WAPMPTDFPPLPDN-------------AEKIMKANKQGRE-DHSRITLT---------PDVIMHVLRLQRRQTLAYR--- 274 (316)
Q Consensus 221 wd~~~~~~~~~~~~-------------~~~~~~~~~~~~~-~~~~~s~~---------~d~~~~~w~~~~~~~~~~~--- 274 (316)
.|+.+......... ........ ..++ ++++++.. ....|.+.|+.+++...+.
T Consensus 252 ~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a-~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg 330 (386)
T 3sjl_D 252 IDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVA-YHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG 330 (386)
T ss_dssp EECTTSSCEECCCEESSCHHHHHTTEEECSSSCEE-EETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE
T ss_pred EECCCCcceeecceeccccccccccccCCCcceee-ECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECC
Confidence 99976642111100 11111122 2344 33444432 2367888898887665543
Q ss_pred ------Eeecccc-cc-cccCCCCeEEEEeccCCC
Q 021160 275 ------ERRYNAA-DF-ESDEEEGETYLLGFSDSD 301 (316)
Q Consensus 275 ------~~~~~~~-~~-~~~~~~~~v~~~~~~~~~ 301 (316)
..++++. .+ .+...++.|.++|...++
T Consensus 331 ~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k 365 (386)
T 3sjl_D 331 HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGE 365 (386)
T ss_dssp EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCC
T ss_pred CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCc
Confidence 3444543 22 334556668888877665
No 214
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.12 E-value=9.2e-09 Score=93.73 Aligned_cols=221 Identities=9% Similarity=0.001 Sum_probs=130.1
Q ss_pred eeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCC-------------cEEEEeCcCCcc
Q 021160 3 LFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDE-------------YARVYDIRKCHW 69 (316)
Q Consensus 3 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg-------------~v~~wd~~~~~~ 69 (316)
..|++||+.+.+..... .. ......++|+ ++ +.|+.++.+. .|++|++.+...
T Consensus 155 ~~i~v~dl~tg~~~~~~-~~-----------~~k~~~~~Ws-Dg-~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~ 220 (693)
T 3iuj_A 155 REIHLMDVESKQPLETP-LK-----------DVKFSGISWL-GN-EGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQE 220 (693)
T ss_dssp EEEEEEETTTCSEEEEE-EE-----------EEESCCCEEE-TT-TEEEEEESSCCC-------CCCCEEEEEETTSCGG
T ss_pred EEEEEEECCCCCCCccc-cC-----------CceeccEEEe-CC-CEEEEEEecCcccccccccCCCcEEEEEECCCCcc
Confidence 46899999887654331 11 1113578999 88 7777776663 399999887641
Q ss_pred cCCCCCCCCceecccccccCC-CcccEEEEEEccCCCeEEE-e-c---CCcEEEEEcCCCCCCCCccCCccccccCCCcc
Q 021160 70 YSPISSDTPVDTFCPRHLIGK-NNIHITGLAYSNTSELLIS-Y-N---DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQ 143 (316)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~s-~-~---d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 143 (316)
. .. ..... .. |...+..+.|+|+|++|+. . . ...|+++|+.++. ....
T Consensus 221 ~-------~~---~v~~~-~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~---------------~~~~ 274 (693)
T 3iuj_A 221 D-------DR---LVFGA-IPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQEN---------------APLL 274 (693)
T ss_dssp G-------CE---EEESC-SGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTT---------------CCCE
T ss_pred c-------ce---EEEec-CCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCC---------------CceE
Confidence 0 00 11111 22 3445788999999996543 2 2 3589999987651 1345
Q ss_pred eeeCCcCCceeeeEEEecCCCcEEE-Eecc---CCeEEEEeccCCee--EEEeecCccceEEEEEcCCCCeEEEEeC-CC
Q 021160 144 VYSGHRNSQTVKGVNFFGPNDEYVM-SGSD---CGHLFIWKKKGGKL--VRLMVGDRHVVNQLEPHPHIPMFATCGI-EK 216 (316)
Q Consensus 144 ~~~~~~~~~~i~~~~~~~~~~~~l~-~~~~---dg~v~~wd~~~~~~--~~~~~~~~~~v~~~~~~p~~~~l~s~~~-d~ 216 (316)
.+..+... .... + ++++..|+ .... .+.|..+++.++.. ...+..|...+. .|+|+++.|+.... ++
T Consensus 275 ~l~~~~~~--~~~~-~-~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g 348 (693)
T 3iuj_A 275 TVQGDLDA--DVSL-V-DNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDA 348 (693)
T ss_dssp EEECSSSS--CEEE-E-EEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETT
T ss_pred EEeCCCCc--eEEE-E-eccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECC
Confidence 55555543 4443 3 44555544 4433 36899999987654 345555665555 88999988766654 44
Q ss_pred --cEEEecCCCCCCCCCCC-CcccceeeeecCCCCc-eeEEecC---CCeEEEEEecccCc
Q 021160 217 --TVKLWAPMPTDFPPLPD-NAEKIMKANKQGREDH-SRITLTP---DVIMHVLRLQRRQT 270 (316)
Q Consensus 217 --~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~s~~~---d~~~~~w~~~~~~~ 270 (316)
.|++|++.++....+.- ....+.... .++++. ++++.+. -+.+..+++.+++.
T Consensus 349 ~~~l~~~d~~g~~~~~l~~p~~~~~~~~~-~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 349 TARVEQFDYEGKRVREVALPGLGSVSGFN-GKHDDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp EEEEEEECTTSCEEEEECCSSSSEEEECC-CCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred eeEEEEEECCCCeeEEeecCCCceEEeee-cCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 68999988665333321 222232333 344444 4444333 27788888766543
No 215
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.11 E-value=2e-09 Score=98.07 Aligned_cols=199 Identities=9% Similarity=0.116 Sum_probs=120.3
Q ss_pred CCccceEEEEECCCCCcEEEEE-----ecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCe
Q 021160 32 MNSIRLNAIVIDPRNPNYFAVG-----GSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSEL 106 (316)
Q Consensus 32 gh~~~v~~~~~~~~~~~~l~~g-----~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 106 (316)
+|...+..++|+|+| +++|.+ +....|++||+.+++.. ...+ . ......++|+ ||+.
T Consensus 126 ~~~~~l~~~~~SpDg-~~lAy~~~~~G~~~~~i~v~dl~tg~~~-------------~~~~-~--~~k~~~~~Ws-Dg~~ 187 (693)
T 3iuj_A 126 DGTTALDQLSFSRDG-RILAYSLSLAGSDWREIHLMDVESKQPL-------------ETPL-K--DVKFSGISWL-GNEG 187 (693)
T ss_dssp TSCCEEEEEEECTTS-SEEEEEEECSSCCEEEEEEEETTTCSEE-------------EEEE-E--EEESCCCEEE-TTTE
T ss_pred CCcEEEEEEEECCCC-CEEEEEEecCCCceEEEEEEECCCCCCC-------------cccc-C--CceeccEEEe-CCCE
Confidence 466678999999999 677643 23357999999988621 0011 1 1112467899 9985
Q ss_pred EEE-ecCC-------------cEEEEEcCCCCCCCCccCCccccccCCCcceeeCCc-CCceeeeEEEecCCCcEEEEec
Q 021160 107 LIS-YNDE-------------LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHR-NSQTVKGVNFFGPNDEYVMSGS 171 (316)
Q Consensus 107 l~s-~~d~-------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~l~~~~ 171 (316)
|+. ..+. .|++|++.+... .....+.... ......++.| +|+|++|+...
T Consensus 188 l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~--------------~~~~v~~~~~~~~~~~~~~~~-SpDg~~l~~~~ 252 (693)
T 3iuj_A 188 FFYSSYDKPDGSELSARTDQHKVYFHRLGTAQE--------------DDRLVFGAIPAQHHRYVGATV-TEDDRFLLISA 252 (693)
T ss_dssp EEEEESSCCC-------CCCCEEEEEETTSCGG--------------GCEEEESCSGGGCCSEEEEEE-CTTSCEEEEEE
T ss_pred EEEEEecCcccccccccCCCcEEEEEECCCCcc--------------cceEEEecCCCCCeEEEEEEE-cCCCCEEEEEE
Confidence 554 4443 399999876510 1122232222 1122678888 99999886543
Q ss_pred c----CCeEEEEeccCCe-eEEEeecCccceEEEEEcCCCCeEE-EEeCC---CcEEEecCCCCCC---CCCCCCcccce
Q 021160 172 D----CGHLFIWKKKGGK-LVRLMVGDRHVVNQLEPHPHIPMFA-TCGIE---KTVKLWAPMPTDF---PPLPDNAEKIM 239 (316)
Q Consensus 172 ~----dg~v~~wd~~~~~-~~~~~~~~~~~v~~~~~~p~~~~l~-s~~~d---~~i~iwd~~~~~~---~~~~~~~~~~~ 239 (316)
. ...++++|+.++. ....+..+....... |++++..|+ ....+ +.|..+++.+... ..+..+...++
T Consensus 253 ~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~ 331 (693)
T 3iuj_A 253 ANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL 331 (693)
T ss_dssp ESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE
T ss_pred ccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE
Confidence 3 3589999998763 345555566555555 666666644 44433 5788999887653 34444544444
Q ss_pred eeeecCCCCceeEE-ecCCC--eEEEEEecc
Q 021160 240 KANKQGREDHSRIT-LTPDV--IMHVLRLQR 267 (316)
Q Consensus 240 ~~~~~~~~~~~~~s-~~~d~--~~~~w~~~~ 267 (316)
.+++++..++. ...++ .|++|++..
T Consensus 332 ---~~s~~g~~lv~~~~~~g~~~l~~~d~~g 359 (693)
T 3iuj_A 332 ---TVHSGSGYLFAEYMVDATARVEQFDYEG 359 (693)
T ss_dssp ---EEEEETTEEEEEEEETTEEEEEEECTTS
T ss_pred ---EEEEECCEEEEEEEECCeeEEEEEECCC
Confidence 45665555554 44454 577777653
No 216
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.11 E-value=3.8e-11 Score=100.96 Aligned_cols=181 Identities=10% Similarity=0.037 Sum_probs=92.3
Q ss_pred cEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEE-ecCCcEEEEEcCCCCCC
Q 021160 48 NYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLIS-YNDELVYLFEKNMGLGP 126 (316)
Q Consensus 48 ~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s-~~d~~i~iwd~~~~~~~ 126 (316)
..+++++.|+.|+.||..+++.... . .. ..+.+..+..++.++++ +.|+.|+.||..++
T Consensus 10 ~~v~~gs~dg~v~a~d~~tG~~~W~--------------~-~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG--- 69 (369)
T 2hz6_A 10 TLLFVSTLDGSLHAVSKRTGSIKWT--------------L-KE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNN--- 69 (369)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEE--------------E-EC--CCSCCCC-----CCEEECTTTCCEEEC--------
T ss_pred CEEEEEcCCCEEEEEECCCCCEEEE--------------e-cC--CCceecceEcCCCEEEEeCCCCEEEEEECCCC---
Confidence 6889999999999999999974321 1 11 22333334456766666 57999999999877
Q ss_pred CCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCeeEEEeecCccceEEEEEcCCC
Q 021160 127 SPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHI 206 (316)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~ 206 (316)
+.+..+..+... .+.+.-. -..+..+++++.++.++.||..+|+.+..+..+. ...++|++
T Consensus 70 -------------~~~w~~~~~~~~-~~~~sp~-~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~ 130 (369)
T 2hz6_A 70 -------------EGLTKLPFTIPE-LVQASPC-RSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPST 130 (369)
T ss_dssp -------------CCSEECSCCHHH-HHTTCSC-C-----CCCCEEEEEEEEECCC------------------------
T ss_pred -------------ceeeeeeccCcc-ccccCce-EecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccC
Confidence 344333322110 0111000 1135577888889999999999999887776543 23456788
Q ss_pred CeEEEEeCCCcEEEecCCCCCC-CCCCCCcccceeeeecCCC---CceeEEecCCCeEEEEEecccCc
Q 021160 207 PMFATCGIEKTVKLWAPMPTDF-PPLPDNAEKIMKANKQGRE---DHSRITLTPDVIMHVLRLQRRQT 270 (316)
Q Consensus 207 ~~l~s~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~s~~~d~~~~~w~~~~~~~ 270 (316)
..+++++.|+.|+.||.++++. ..+.... ........+ ...++.++.++.+..||..+++.
T Consensus 131 ~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~---~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~ 195 (369)
T 2hz6_A 131 SLLYLGRTEYTITMYDTKTRELRWNATYFD---YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDV 195 (369)
T ss_dssp --EEEEEEEEEEECCCSSSSSCCCEEEEEE---ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCE
T ss_pred CEEEEEecCCEEEEEECCCCCEEEeEeccc---ccCccccCCccccceEEEECCCCEEEEEECCCCcE
Confidence 8888899999999999988873 2222111 011111111 14567788899999999887754
No 217
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.07 E-value=1.5e-08 Score=84.25 Aligned_cols=234 Identities=9% Similarity=-0.020 Sum_probs=138.4
Q ss_pred ceEEEEECCCCCcEEEEEe--cCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEe-c-
Q 021160 36 RLNAIVIDPRNPNYFAVGG--SDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-N- 111 (316)
Q Consensus 36 ~v~~~~~~~~~~~~l~~g~--~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~- 111 (316)
.+..++++|++ +++++.. .++.++||.+.++++..... . ......+...+..+++.++++++++. .
T Consensus 18 ~p~~va~~~~g-~~~v~~~~~~~~~~~l~~~~~g~~~~~p~-------~--~~~~~~~~~~p~gv~~d~~g~L~v~D~g~ 87 (343)
T 2qe8_A 18 APGNITLTPDG-RLFLSLHQFYQPEMQVAELTQDGLIPFPP-------Q--SGNAIITFDTVLGIKSDGNGIVWMLDNGN 87 (343)
T ss_dssp CEEEEEECTTS-CEEEEECGGGCCSCSEEEEETTEEEESCC-------C--CSSCCCCCSCEEEEEECSSSEEEEEECHH
T ss_pred CcceEEECCCC-CEEEEeCCCCCCceEEEEECCCCeecCCC-------c--ccCcccceeEeeEEEEcCCCcEEEEcCCC
Confidence 57899999998 7888753 23435566655444221000 0 00112455689999999999877763 3
Q ss_pred ----CCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCc----CCceeeeEEEecCCC-cEEEEec---cCCeEEEE
Q 021160 112 ----DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHR----NSQTVKGVNFFGPND-EYVMSGS---DCGHLFIW 179 (316)
Q Consensus 112 ----d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~-~~l~~~~---~dg~v~~w 179 (316)
+..|.+||+.++ +..+.+.... ....+..+++ ++++ ..+++.. .++.|.+|
T Consensus 88 ~~~~~~~i~~~d~~tg----------------~~~~~~~~~~~~~~~~~~~~~v~v-d~~~g~~yvtd~~~~~~~~i~v~ 150 (343)
T 2qe8_A 88 QSKSVPKLVAWDTLNN----------------QLSRVIYLPPPITLSNSFVNDLAV-DLIHNFVYISDPAPDDKAALIRV 150 (343)
T ss_dssp HHTSCCEEEEEETTTT----------------EEEEEEECCTTTSCTTCCCCEEEE-ETTTTEEEEEECCSGGGCEEEEE
T ss_pred CcCCCCeEEEEECCCC----------------eEEEEEECChhhcccccccceEEE-ecCCCEEEEEcCccCCCCeEEEE
Confidence 588999999876 3444443211 1122688888 7654 4445554 67899999
Q ss_pred eccCCeeEEEeecCc-----------------------------cceEEEEEcCCCCeEEEEeCCC-cEEEecCC---CC
Q 021160 180 KKKGGKLVRLMVGDR-----------------------------HVVNQLEPHPHIPMFATCGIEK-TVKLWAPM---PT 226 (316)
Q Consensus 180 d~~~~~~~~~~~~~~-----------------------------~~v~~~~~~p~~~~l~s~~~d~-~i~iwd~~---~~ 226 (316)
|+.+++....+.+|. ..+..++|+|+++.|..+..++ .+..++.. ..
T Consensus 151 d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~ 230 (343)
T 2qe8_A 151 DLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNL 230 (343)
T ss_dssp ETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCT
T ss_pred ECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCC
Confidence 999888766554321 1357899999999887776665 44444321 11
Q ss_pred CC------CCCC--CCcccceeeeecCCCCceeEEecCCCeEEEEEecccCcceeEEeec---ccccccccCCCCeEEEE
Q 021160 227 DF------PPLP--DNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTLAYRERRY---NAADFESDEEEGETYLL 295 (316)
Q Consensus 227 ~~------~~~~--~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~~~~~~~~~~---~~~~~~~~~~~~~v~~~ 295 (316)
.+ ..+. ++......+ ...+++.++++...++.|.+|+..+++...... .+ ....++.+ .+|.+|+.
T Consensus 231 ~~~~~~~~~~~~~~g~~g~pdgi-a~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~-~~~~~~p~~va~~-~~g~l~v~ 307 (343)
T 2qe8_A 231 QLTDAELGSKIERYSEKPICDGI-SIDKDHNIYVGDLAHSAIGVITSADRAYKLLVT-DEKLSWTDSFNFG-SDGYLYFD 307 (343)
T ss_dssp TCCHHHHHTTCEEEEECCSCSCE-EECTTCCEEEEEGGGTEEEEEETTTTEEEEEEE-CGGGSCEEEEEEC-TTSCEEEE
T ss_pred CCChhhhhcceEecccCCCCceE-EECCCCCEEEEccCCCeEEEEECCCCCEEEEEE-CCceecCCeeEEC-CCCcEEEE
Confidence 10 0111 111111122 356678899999999999999974443222221 11 12233333 34778888
Q ss_pred eccC
Q 021160 296 GFSD 299 (316)
Q Consensus 296 ~~~~ 299 (316)
+...
T Consensus 308 ~~~~ 311 (343)
T 2qe8_A 308 CNQL 311 (343)
T ss_dssp ECCG
T ss_pred eCcc
Confidence 7543
No 218
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.04 E-value=3.4e-08 Score=80.66 Aligned_cols=189 Identities=9% Similarity=0.052 Sum_probs=112.8
Q ss_pred ccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEE----
Q 021160 34 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLIS---- 109 (316)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s---- 109 (316)
...+..++++++| +++++...++.|.+|+.. ++.. .+.. .........+..+++.++|+++++
T Consensus 85 ~~~~~gl~~d~dG-~l~v~~~~~~~v~~~~~~-g~~~----------~~~~-~~~~~~~~~~~~i~~d~dG~l~~td~~~ 151 (305)
T 3dr2_A 85 TAFTNGNAVDAQQ-RLVHCEHGRRAITRSDAD-GQAH----------LLVG-RYAGKRLNSPNDLIVARDGAIWFTDPPF 151 (305)
T ss_dssp CSCEEEEEECTTS-CEEEEETTTTEEEEECTT-SCEE----------EEEC-EETTEECSCCCCEEECTTSCEEEECCSG
T ss_pred CCccceeeECCCC-CEEEEECCCCEEEEECCC-CCEE----------EEEe-ccCCCccCCCCCEEECCCCCEEEeCcCC
Confidence 4568899999998 666665566889999976 4321 1100 000111234667999999998885
Q ss_pred ec--------------CCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEeccC--
Q 021160 110 YN--------------DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDC-- 173 (316)
Q Consensus 110 ~~--------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d-- 173 (316)
+. .+.|+.+|..++ +. ..+. .... ...++| +|+++.|+.+...
T Consensus 152 g~~~~~~~~~~~~~~~~~~v~~~d~~~g----------------~~-~~~~-~~~~--p~gl~~-spdg~~lyv~~~~~~ 210 (305)
T 3dr2_A 152 GLRKPSQGCPADPELAHHSVYRLPPDGS----------------PL-QRMA-DLDH--PNGLAF-SPDEQTLYVSQTPEQ 210 (305)
T ss_dssp GGSCGGGSCCCCCSSSCEEEEEECSSSC----------------CC-EEEE-EESS--EEEEEE-CTTSSEEEEEECCC-
T ss_pred CccccccccccccccCCCeEEEEcCCCC----------------cE-EEEe-cCCC--CcceEE-cCCCCEEEEEecCCc
Confidence 21 245777776555 22 2222 2222 678998 9999987776654
Q ss_pred ----CeEEEEeccCCeeE--EEe-ecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCCCCCCCCCcccceeeeecCC
Q 021160 174 ----GHLFIWKKKGGKLV--RLM-VGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGR 246 (316)
Q Consensus 174 ----g~v~~wd~~~~~~~--~~~-~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 246 (316)
+.|+.|++..+... ..+ .........+++.++|++.++. .+ .|.+|+.....+..+.... .+..++ +.+
T Consensus 211 ~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~-~~-gv~~~~~~g~~~~~~~~~~-~~~~~~-f~~ 286 (305)
T 3dr2_A 211 GHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSS-GT-GVCVFDSDGQLLGHIPTPG-TASNCT-FDQ 286 (305)
T ss_dssp --CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECC-SS-EEEEECTTSCEEEEEECSS-CCCEEE-ECT
T ss_pred CCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEec-CC-cEEEECCCCCEEEEEECCC-ceeEEE-EeC
Confidence 78999998765421 111 1123445678999999965544 44 4999998655433332222 233444 446
Q ss_pred CCceeEEecCCCeE
Q 021160 247 EDHSRITLTPDVIM 260 (316)
Q Consensus 247 ~~~~~~s~~~d~~~ 260 (316)
++..+...+.++..
T Consensus 287 d~~~L~it~~~~l~ 300 (305)
T 3dr2_A 287 AQQRLFITGGPCLW 300 (305)
T ss_dssp TSCEEEEEETTEEE
T ss_pred CCCEEEEEcCCeEE
Confidence 65555555555443
No 219
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.03 E-value=3.3e-08 Score=80.71 Aligned_cols=154 Identities=10% Similarity=0.030 Sum_probs=104.6
Q ss_pred cceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEe-cCC
Q 021160 35 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-NDE 113 (316)
Q Consensus 35 ~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~ 113 (316)
.......|+|++..+++++..++.|..|+.. ++. ..+ ..+...+..+++.++|+++++. .++
T Consensus 45 ~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~~----------~~~------~~~~~~~~gl~~d~dG~l~v~~~~~~ 107 (305)
T 3dr2_A 45 TWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GTV----------DVL------LDATAFTNGNAVDAQQRLVHCEHGRR 107 (305)
T ss_dssp SSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SCE----------EEE------EESCSCEEEEEECTTSCEEEEETTTT
T ss_pred cCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CCE----------EEE------eCCCCccceeeECCCCCEEEEECCCC
Confidence 3467899999984477888888999999873 431 111 1234567899999999987775 467
Q ss_pred cEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcC---CceeeeEEEecCCCcEEEE----ecc-------------C
Q 021160 114 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRN---SQTVKGVNFFGPNDEYVMS----GSD-------------C 173 (316)
Q Consensus 114 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~~l~~----~~~-------------d 173 (316)
.|.+|+.. + . ...+..... ...+.++++ .++|.++++ |.. .
T Consensus 108 ~v~~~~~~-g----------------~-~~~~~~~~~~~~~~~~~~i~~-d~dG~l~~td~~~g~~~~~~~~~~~~~~~~ 168 (305)
T 3dr2_A 108 AITRSDAD-G----------------Q-AHLLVGRYAGKRLNSPNDLIV-ARDGAIWFTDPPFGLRKPSQGCPADPELAH 168 (305)
T ss_dssp EEEEECTT-S----------------C-EEEEECEETTEECSCCCCEEE-CTTSCEEEECCSGGGSCGGGSCCCCCSSSC
T ss_pred EEEEECCC-C----------------C-EEEEEeccCCCccCCCCCEEE-CCCCCEEEeCcCCCccccccccccccccCC
Confidence 89999975 3 1 122211111 012678888 899998886 432 3
Q ss_pred CeEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCC------CcEEEecCCCC
Q 021160 174 GHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIE------KTVKLWAPMPT 226 (316)
Q Consensus 174 g~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d------~~i~iwd~~~~ 226 (316)
+.|+.+|..+++..... .......++|+|+++.|+.+... +.|.+|++...
T Consensus 169 ~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~ 225 (305)
T 3dr2_A 169 HSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDG 225 (305)
T ss_dssp EEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETT
T ss_pred CeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCC
Confidence 56888888777654433 33466889999999977666554 68999998653
No 220
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.97 E-value=6.7e-07 Score=75.06 Aligned_cols=187 Identities=9% Similarity=-0.056 Sum_probs=112.3
Q ss_pred EECCCCCcEEEEEec--CC---cEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEec----
Q 021160 41 VIDPRNPNYFAVGGS--DE---YARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYN---- 111 (316)
Q Consensus 41 ~~~~~~~~~l~~g~~--dg---~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~---- 111 (316)
...|++ .++++... .. .|.++|..+++.. ..+..+ ..+ .++++|+|+++..++
T Consensus 27 ~~~~~~-~~~yv~~~~~~~~~~~v~v~D~~t~~~~--------------~~i~~g-~~p--~i~~spDg~~lyv~n~~~~ 88 (373)
T 2mad_H 27 APGADG-RRSYINLPAHHSAIIQQWVLDAGSGSIL--------------GHVNGG-FLP--NPVAAHSGSEFALASTSFS 88 (373)
T ss_pred cCCCCC-CEEEEeCCcccCCccEEEEEECCCCeEE--------------EEecCC-CCC--CeEECCCCCEEEEEecccc
Confidence 344666 55555542 33 7899999988732 222122 223 899999999666542
Q ss_pred -------CCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCC-cC----CceeeeEEEecCCCcEEEEecc--CCeEE
Q 021160 112 -------DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGH-RN----SQTVKGVNFFGPNDEYVMSGSD--CGHLF 177 (316)
Q Consensus 112 -------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~i~~~~~~~~~~~~l~~~~~--dg~v~ 177 (316)
++.|.+||..+. +.+..+... .. ......+.+ +|+|++|++++. ++.|.
T Consensus 89 ~~~rg~~~~~v~viD~~t~----------------~~~~~i~~~~~~~~~~g~~p~~~~~-spDG~~l~v~n~~~~~~v~ 151 (373)
T 2mad_H 89 RIAKGKRTDYVEVFDPVTF----------------LPIADIELPDAPRFDVGPYSWMNAN-TPNNADLLFFQFAAGPAVG 151 (373)
T ss_pred ccccCCCCCeEEEEECCCC----------------cEEEEEECCCccccccCCCccceEE-CCCCCEEEEEecCCCCeEE
Confidence 577999999776 344444321 00 011457888 999999998874 57899
Q ss_pred EEeccCCeeEEE-eecCccceEEEEEcCCCC-eEEEEeCCCcEEEecCCCCCCC-CCC-----CCcccceeeeecCCCCc
Q 021160 178 IWKKKGGKLVRL-MVGDRHVVNQLEPHPHIP-MFATCGIEKTVKLWAPMPTDFP-PLP-----DNAEKIMKANKQGREDH 249 (316)
Q Consensus 178 ~wd~~~~~~~~~-~~~~~~~v~~~~~~p~~~-~l~s~~~d~~i~iwd~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~ 249 (316)
++| .+++.+.. +.... ++.+.|+++ .+++.+.||.+.+++. .++.. ... ....++.....+.+++.
T Consensus 152 viD-~t~~~~~~~i~~~~----~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 225 (373)
T 2mad_H 152 LVV-QGGSSDDQLLSSPT----CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSG 225 (373)
T ss_pred EEE-CCCCEEeEEcCCCc----eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCC
Confidence 999 99998877 65322 244556654 4667778999999999 65422 110 11112111111223333
Q ss_pred eeEEecCCCeEEEEEeccc
Q 021160 250 SRITLTPDVIMHVLRLQRR 268 (316)
Q Consensus 250 ~~~s~~~d~~~~~w~~~~~ 268 (316)
.++..+..+.+.+.|+...
T Consensus 226 ~~~~~~~~~~v~vid~~~~ 244 (373)
T 2mad_H 226 RIVWPVYSGKILQADISAA 244 (373)
T ss_pred EEEEEcCCceEEEEeccCC
Confidence 3333346778888887644
No 221
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.93 E-value=9.1e-08 Score=81.15 Aligned_cols=255 Identities=9% Similarity=-0.005 Sum_probs=148.0
Q ss_pred eeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEe----------cCCcEEEEeCcCCcccCC
Q 021160 3 LFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGG----------SDEYARVYDIRKCHWYSP 72 (316)
Q Consensus 3 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~----------~dg~v~~wd~~~~~~~~~ 72 (316)
+.|.++|+.+.+....+... ..+ .++++|++ ++++++. .++.|.++|..+.+....
T Consensus 99 ~~VsVID~~t~~vv~~I~vG-----------~~P--gia~SpDg-k~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~ 164 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGG-----------FLP--HPVAAEDG-SFFAQASTVFERIARGKRTDYVEVFDPVTFLPIAD 164 (426)
T ss_dssp EEEEEEETTTTEEEEEEEEC-----------SSC--EEEECTTS-SCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEE
T ss_pred CeEEEEECCCCEEEEEEECC-----------CCC--ceEECCCC-CEEEEEeccccccccCCCCCEEEEEECCCCcEEEE
Confidence 78999999888776666653 224 79999999 5555554 467899999998874322
Q ss_pred CCCCCCceecccccccCCCcccEEEEEEccCCCeEEEe--c-CCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCc
Q 021160 73 ISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY--N-DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHR 149 (316)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~--~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (316)
+..+.+ ... ........+.++|+|+++..+ . ++.|.+.|+.+. +.+..+....
T Consensus 165 I~v~g~------~r~--~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~----------------kvv~~I~v~g 220 (426)
T 3c75_H 165 IELPDA------PRF--LVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGK----------------TFDRMLDVPD 220 (426)
T ss_dssp EEETTC------CCC--CBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTT----------------EEEEEEECCS
T ss_pred EECCCc------ccc--ccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCC----------------eEEEEEEcCC
Confidence 110000 000 001123467899999866553 2 678999999887 5555555321
Q ss_pred CCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCeeEEE----eecCccce-EEEEEcCCCCeEEEEeCCCcEEEecCC
Q 021160 150 NSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRL----MVGDRHVV-NQLEPHPHIPMFATCGIEKTVKLWAPM 224 (316)
Q Consensus 150 ~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~----~~~~~~~v-~~~~~~p~~~~l~s~~~d~~i~iwd~~ 224 (316)
. ...+ +.....+++.+.||.+.+.+..+++.... +.....++ ..+.+.+++..++..+..+.+.+.|..
T Consensus 221 ----~-~~~~-p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~ 294 (426)
T 3c75_H 221 ----C-YHIF-PASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLT 294 (426)
T ss_dssp ----E-EEEE-EEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEEC
T ss_pred ----c-eeec-cCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEecc
Confidence 1 1111 22235556666788887778766655432 11111111 235678888887777778899999986
Q ss_pred CCCC---CCCC---CC-------cccceeeeecCCCCc-eeEEec---------CCCeEEEEEecccCcceeE-------
Q 021160 225 PTDF---PPLP---DN-------AEKIMKANKQGREDH-SRITLT---------PDVIMHVLRLQRRQTLAYR------- 274 (316)
Q Consensus 225 ~~~~---~~~~---~~-------~~~~~~~~~~~~~~~-~~~s~~---------~d~~~~~w~~~~~~~~~~~------- 274 (316)
.... ..+. .. ....... .+++++. ++++.. .++.|.++|+.+.+.....
T Consensus 295 ~~~~~v~~~~~~~~~~~i~~g~~p~g~~~v-a~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~P~ 373 (426)
T 3c75_H 295 AEGATFRAPIEALTEAERADDWRPGGWQQT-AYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHEID 373 (426)
T ss_dssp SSCEEECCCEESSCTTTGGGTEEECSSSCE-EEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEEC
T ss_pred CCceEEeeeeeeccccccccccccCCceee-EEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCCcC
Confidence 5431 1110 00 0000012 2455544 444432 2467999999887655443
Q ss_pred --Eeecccc-ccccc-CCCCeEEEEeccCCCC
Q 021160 275 --ERRYNAA-DFESD-EEEGETYLLGFSDSDA 302 (316)
Q Consensus 275 --~~~~~~~-~~~~~-~~~~~v~~~~~~~~~~ 302 (316)
.+.+++. .+... ..++.|.++|......
T Consensus 374 gia~spDg~~~lyv~n~~s~~VsVID~~t~kv 405 (426)
T 3c75_H 374 SINVSQDAEPLLYALSAGTQTLHIYDAATGEE 405 (426)
T ss_dssp EEEECCSSSCEEEEEETTTTEEEEEETTTCCE
T ss_pred eEEEccCCCEEEEEEcCCCCeEEEEECCCCCE
Confidence 3455554 33333 3567788888877653
No 222
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.89 E-value=5.8e-08 Score=80.70 Aligned_cols=185 Identities=12% Similarity=0.098 Sum_probs=106.0
Q ss_pred CCccceEEEEECCCCCcEEEEEec-----CCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCC-C
Q 021160 32 MNSIRLNAIVIDPRNPNYFAVGGS-----DEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTS-E 105 (316)
Q Consensus 32 gh~~~v~~~~~~~~~~~~l~~g~~-----dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~ 105 (316)
+|...+..+++++++ +++++-.. +..|.+||+.++++...+. .......+...+..+++.+++ .
T Consensus 64 ~~~~~p~gv~~d~~g-~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~---------~~~~~~~~~~~~~~v~vd~~~g~ 133 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNG-IVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIY---------LPPPITLSNSFVNDLAVDLIHNF 133 (343)
T ss_dssp CCCSCEEEEEECSSS-EEEEEECHHHHTSCCEEEEEETTTTEEEEEEE---------CCTTTSCTTCCCCEEEEETTTTE
T ss_pred cceeEeeEEEEcCCC-cEEEEcCCCCcCCCCeEEEEECCCCeEEEEEE---------CChhhcccccccceEEEecCCCE
Confidence 466789999999998 66665543 5789999999887432211 100001223456789999865 4
Q ss_pred eEEE-e---cCCcEEEEEcCCCCCCCCc----cCCccc---cccCCCcceeeCCc----CCceeeeEEEecCCCcEEEEe
Q 021160 106 LLIS-Y---NDELVYLFEKNMGLGPSPL----SLSPED---LQKREEPQVYSGHR----NSQTVKGVNFFGPNDEYVMSG 170 (316)
Q Consensus 106 ~l~s-~---~d~~i~iwd~~~~~~~~~~----~~~~~~---~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~l~~~ 170 (316)
.+++ . .++.|.+||+.++...... ...... .............. -...+..+++ +|+++.|+.+
T Consensus 134 ~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~-s~dg~~ly~~ 212 (343)
T 2qe8_A 134 VYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVL-DAENEWLYLS 212 (343)
T ss_dssp EEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEE-CTTSCEEEEE
T ss_pred EEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEe-ccCCCEEEEE
Confidence 5555 3 5788999998765210000 000000 00000000000000 0012678998 9999988887
Q ss_pred ccCC-eEEEEecc---CCe-----eEE--EeecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC
Q 021160 171 SDCG-HLFIWKKK---GGK-----LVR--LMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD 227 (316)
Q Consensus 171 ~~dg-~v~~wd~~---~~~-----~~~--~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~ 227 (316)
...+ .++.++.. .+. ... ...++......+++++++.++++...++.|.+||...++
T Consensus 213 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~ 280 (343)
T 2qe8_A 213 PMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRA 280 (343)
T ss_dssp ESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTE
T ss_pred eCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCC
Confidence 6655 55555532 111 000 111333456679999999999998889999999984443
No 223
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.89 E-value=4.4e-06 Score=66.58 Aligned_cols=198 Identities=8% Similarity=-0.024 Sum_probs=119.0
Q ss_pred ceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCC-eEEEe-cCC
Q 021160 36 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE-LLISY-NDE 113 (316)
Q Consensus 36 ~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~s~-~d~ 113 (316)
.+..++|++++..++++-..++.|..+++..... ..+..........+++.+++. ++++. ..+
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~---------------~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~ 101 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEP---------------TTIIRQDLGSPEGIALDHLGRTIFWTDSQLD 101 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCC---------------EEEECTTCCCEEEEEEETTTTEEEEEETTTT
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCc---------------EEEEECCCCCccEEEEEecCCeEEEEECCCC
Confidence 4679999997645666666788999999875531 111111124568899999765 55553 578
Q ss_pred cEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEecc---CCeEEEEeccCCeeEEEe
Q 021160 114 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSD---CGHLFIWKKKGGKLVRLM 190 (316)
Q Consensus 114 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~---dg~v~~wd~~~~~~~~~~ 190 (316)
.|.+++++.. ....+.... ......+++ +|++..|+.+.. .+.|..+++.. +....+
T Consensus 102 ~I~~~~~~g~-----------------~~~~~~~~~-~~~P~~i~v-d~~~g~lyv~~~~~~~~~I~~~~~dg-~~~~~~ 161 (267)
T 1npe_A 102 RIEVAKMDGT-----------------QRRVLFDTG-LVNPRGIVT-DPVRGNLYWTDWNRDNPKIETSHMDG-TNRRIL 161 (267)
T ss_dssp EEEEEETTSC-----------------SCEEEECSS-CSSEEEEEE-ETTTTEEEEEECCSSSCEEEEEETTS-CCCEEE
T ss_pred EEEEEEcCCC-----------------CEEEEEECC-CCCccEEEE-eeCCCEEEEEECCCCCcEEEEEecCC-CCcEEE
Confidence 8999998754 222222111 122688898 886555554443 46888888763 333333
Q ss_pred e-cCccceEEEEEcCCCCeE-EEEeCCCcEEEecCCCCCCCCCCCCcccceeeeecCCCCceeEEecCCCeEEEEEeccc
Q 021160 191 V-GDRHVVNQLEPHPHIPMF-ATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR 268 (316)
Q Consensus 191 ~-~~~~~v~~~~~~p~~~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~ 268 (316)
. ..-.....++++|++..| ++....+.|.++++.+.....+.........++ . .++.++++....+.|..++..++
T Consensus 162 ~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~P~gi~-~-d~~~lyva~~~~~~v~~~d~~~g 239 (267)
T 1npe_A 162 AQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVT-S-YGKNLYYTDWKTNSVIAMDLAIS 239 (267)
T ss_dssp ECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEE-E-ETTEEEEEETTTTEEEEEETTTT
T ss_pred EECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCCCCceEEE-E-eCCEEEEEECCCCeEEEEeCCCC
Confidence 2 223457889999987664 555567889999987643211111111112222 1 14556666667788888887665
Q ss_pred Cc
Q 021160 269 QT 270 (316)
Q Consensus 269 ~~ 270 (316)
+.
T Consensus 240 ~~ 241 (267)
T 1npe_A 240 KE 241 (267)
T ss_dssp EE
T ss_pred Cc
Confidence 43
No 224
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.87 E-value=3.1e-10 Score=95.34 Aligned_cols=174 Identities=11% Similarity=0.015 Sum_probs=89.9
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
+|.|+.||..+.+....+.. +.+.+..+..++ ..+++++.|+.|+.||..+++.......
T Consensus 18 dg~v~a~d~~tG~~~W~~~~-------------~~~~s~p~~~~g-~~~v~~s~dg~l~a~d~~tG~~~w~~~~------ 77 (369)
T 2hz6_A 18 DGSLHAVSKRTGSIKWTLKE-------------DPVLQVPTHVEE-PAFLPDPNDGSLYTLGSKNNEGLTKLPF------ 77 (369)
T ss_dssp TSEEEEEETTTCCEEEEEEC-------------CCSCCCC------CCEEECTTTCCEEEC-----CCSEECSC------
T ss_pred CCEEEEEECCCCCEEEEecC-------------CCceecceEcCC-CEEEEeCCCCEEEEEECCCCceeeeeec------
Confidence 57899999988876555443 123334445556 6788888999999999988863211100
Q ss_pred cccccccCCCcccEEEEEEccCCCeEEEecCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEec
Q 021160 82 FCPRHLIGKNNIHITGLAYSNTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFG 161 (316)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 161 (316)
...... ...+ .+..++.+++++.++.|+.||..++ +....+..+. ...+ +
T Consensus 78 -~~~~~~--~~sp----~~~~~~~v~~g~~dg~v~a~D~~tG----------------~~~w~~~~~~------~~~~-~ 127 (369)
T 2hz6_A 78 -TIPELV--QASP----CRSSDGILYMGKKQDIWYVIDLLTG----------------EKQQTLSSAF------ADSL-S 127 (369)
T ss_dssp -CHHHHH--TTCS----CC-----CCCCEEEEEEEEECCC----------------------------------------
T ss_pred -cCcccc--ccCc----eEecCCEEEEEeCCCEEEEEECCCC----------------cEEEEecCCC------cccc-c
Confidence 000000 0011 1112344444467899999999988 5555554332 1233 5
Q ss_pred CCCcEEEEeccCCeEEEEeccCCeeEEEeecCccceEEEEEcCCC---CeEEEEeCCCcEEEecCCCCC
Q 021160 162 PNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHI---PMFATCGIEKTVKLWAPMPTD 227 (316)
Q Consensus 162 ~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~---~~l~s~~~d~~i~iwd~~~~~ 227 (316)
|++..+++++.++.|+.||..+|+.+..+..+. ....++.++. ..++.++.|+.|+.||.++++
T Consensus 128 p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~ 194 (369)
T 2hz6_A 128 PSTSLLYLGRTEYTITMYDTKTRELRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGD 194 (369)
T ss_dssp -----EEEEEEEEEEECCCSSSSSCCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCC
T ss_pred ccCCEEEEEecCCEEEEEECCCCCEEEeEeccc--ccCccccCCccccceEEEECCCCEEEEEECCCCc
Confidence 688899999999999999999998776654221 2233444432 456778889999999998876
No 225
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.87 E-value=3.2e-07 Score=77.86 Aligned_cols=174 Identities=7% Similarity=-0.068 Sum_probs=107.2
Q ss_pred CcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEe-----------cCCcEEEEEcCCCCC
Q 021160 57 EYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-----------NDELVYLFEKNMGLG 125 (316)
Q Consensus 57 g~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-----------~d~~i~iwd~~~~~~ 125 (316)
+.|.++|..+.+.. ..+..+ ..+ .++++|+|+.+..+ .++.|.++|..+.
T Consensus 99 ~~VsVID~~t~~vv--------------~~I~vG-~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~-- 159 (426)
T 3c75_H 99 TQQFVIDGSTGRIL--------------GMTDGG-FLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF-- 159 (426)
T ss_dssp EEEEEEETTTTEEE--------------EEEEEC-SSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC--
T ss_pred CeEEEEECCCCEEE--------------EEEECC-CCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC--
Confidence 69999999998743 222122 234 79999999844443 2678999999887
Q ss_pred CCCccCCccccccCCCcceeeCC--cC---CceeeeEEEecCCCcEEEEecc--CCeEEEEeccCCeeEEEeecCccceE
Q 021160 126 PSPLSLSPEDLQKREEPQVYSGH--RN---SQTVKGVNFFGPNDEYVMSGSD--CGHLFIWKKKGGKLVRLMVGDRHVVN 198 (316)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~i~~~~~~~~~~~~l~~~~~--dg~v~~wd~~~~~~~~~~~~~~~~v~ 198 (316)
+.+..+.-. .. ......+.+ +|+|++++++.. ++.|.+.|+.+++.+..+.....
T Consensus 160 --------------~vv~~I~v~g~~r~~~g~~P~~~~~-spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~--- 221 (426)
T 3c75_H 160 --------------LPIADIELPDAPRFLVGTYQWMNAL-TPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC--- 221 (426)
T ss_dssp --------------CEEEEEEETTCCCCCBSCCGGGSEE-CTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE---
T ss_pred --------------cEEEEEECCCccccccCCCcceEEE-cCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc---
Confidence 555555421 00 012467788 999999998864 67899999999999888864221
Q ss_pred EEEEcCCC-CeEEEEeCCCcEEEecCCCCCCC-----CCCCCcccceeeeecCCCCceeEEecCCCeEEEEEeccc
Q 021160 199 QLEPHPHI-PMFATCGIEKTVKLWAPMPTDFP-----PLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR 268 (316)
Q Consensus 199 ~~~~~p~~-~~l~s~~~d~~i~iwd~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~ 268 (316)
....|++ +.+++.+.||.+.+.+...++.. .+.....++.....+.+++..++..+..+.+.+.|+...
T Consensus 222 -~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~ 296 (426)
T 3c75_H 222 -YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAE 296 (426)
T ss_dssp -EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSS
T ss_pred -eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCC
Confidence 2233333 33555566676666666443321 121112222222223555555555566788999998654
No 226
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.86 E-value=6.1e-07 Score=70.91 Aligned_cols=195 Identities=10% Similarity=0.055 Sum_probs=126.3
Q ss_pred ceEEEEECCCCCcEEEEEec--CCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEe-cC
Q 021160 36 RLNAIVIDPRNPNYFAVGGS--DEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-ND 112 (316)
Q Consensus 36 ~v~~~~~~~~~~~~l~~g~~--dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d 112 (316)
....++|+|++ .++++.+. ++.|+++|+.+++....+. + .. ......+++.. +++.++. .+
T Consensus 22 f~~Gl~~~~dg-~Lyvstg~~~~s~v~~iD~~tg~v~~~i~------------l-~~-~~fgeGi~~~g-~~lyv~t~~~ 85 (266)
T 2iwa_A 22 FTQGLVYAEND-TLFESTGLYGRSSVRQVALQTGKVENIHK------------M-DD-SYFGEGLTLLN-EKLYQVVWLK 85 (266)
T ss_dssp CEEEEEECSTT-EEEEEECSTTTCEEEEEETTTCCEEEEEE------------C-CT-TCCEEEEEEET-TEEEEEETTC
T ss_pred CcccEEEeCCC-eEEEECCCCCCCEEEEEECCCCCEEEEEe------------c-CC-CcceEEEEEeC-CEEEEEEecC
Confidence 35799999987 66665543 6899999999998432210 1 11 11223455542 2444444 68
Q ss_pred CcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCeeEEEeec
Q 021160 113 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVG 192 (316)
Q Consensus 113 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~ 192 (316)
+.+.++|..+. +.+..+... .+. -..+ +++++.++.+..++.|.++|..+.+.+..+..
T Consensus 86 ~~v~viD~~t~----------------~v~~~i~~g-~~~-g~gl---t~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~V 144 (266)
T 2iwa_A 86 NIGFIYDRRTL----------------SNIKNFTHQ-MKD-GWGL---ATDGKILYGSDGTSILYEIDPHTFKLIKKHNV 144 (266)
T ss_dssp SEEEEEETTTT----------------EEEEEEECC-SSS-CCEE---EECSSSEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred CEEEEEECCCC----------------cEEEEEECC-CCC-eEEE---EECCCEEEEECCCCeEEEEECCCCcEEEEEEE
Confidence 99999999887 566666533 111 2334 44677777777789999999999988887763
Q ss_pred Cc-----cceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC-CCCCCCC------------cccceeeeecCCC-CceeEE
Q 021160 193 DR-----HVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD-FPPLPDN------------AEKIMKANKQGRE-DHSRIT 253 (316)
Q Consensus 193 ~~-----~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~-~~~~~~~------------~~~~~~~~~~~~~-~~~~~s 253 (316)
.. ..++.+.|. ++..++....++.|.+-|+++++ ...+.-. ...+..-..+.++ .+++++
T Consensus 145 g~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVT 223 (266)
T 2iwa_A 145 KYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVT 223 (266)
T ss_dssp EETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEE
T ss_pred CCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEE
Confidence 21 246788888 67656666568899999999887 3333211 0012233335554 567888
Q ss_pred ecCCCeEEEEEeccc
Q 021160 254 LTPDVIMHVLRLQRR 268 (316)
Q Consensus 254 ~~~d~~~~~w~~~~~ 268 (316)
+.....+.+.++...
T Consensus 224 gk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 224 GKLWPKLFEIKLHLV 238 (266)
T ss_dssp ETTCSEEEEEEEEEC
T ss_pred CCCCCeEEEEEEecc
Confidence 888899999988765
No 227
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.84 E-value=4.9e-06 Score=70.20 Aligned_cols=192 Identities=9% Similarity=0.075 Sum_probs=114.8
Q ss_pred ceeeEEEEeeCCCc-ceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecC------CcEEEEeCcCCcccCCCC
Q 021160 2 VLFNMLFDLRSDSA-TRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSD------EYARVYDIRKCHWYSPIS 74 (316)
Q Consensus 2 ~g~v~vwd~~~~~~-~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~d------g~v~~wd~~~~~~~~~~~ 74 (316)
++.|.|+|+.+... .++...-+..+.....| ...-..+...|++ +++++..+ +.|.++|.++.++.....
T Consensus 105 s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g-~s~Ph~~~~~pdG--i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~ 181 (462)
T 2ece_A 105 SSRIYIIDTKPNPREPKIIKVIEPEEVKKVSG-YSRLHTVHCGPDA--IYISALGNEEGEGPGGILMLDHYSFEPLGKWE 181 (462)
T ss_dssp TCCEEEEECCSCTTSCEEEEEECHHHHHHHHC-EEEEEEEEECSSC--EEEEEEEETTSCSCCEEEEECTTTCCEEEECC
T ss_pred CCeEEEEECCCCCCCceeeeeechhhcccccC-CCcccceeECCCe--EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEc
Confidence 46799999975522 22222211000000000 1134567788988 55555444 789999999887443221
Q ss_pred CCCCceecccccccCCCcccEEEEEEccCCCeEEEec--------------------CCcEEEEEcCCCCCCCCccCCcc
Q 021160 75 SDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYN--------------------DELVYLFEKNMGLGPSPLSLSPE 134 (316)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~--------------------d~~i~iwd~~~~~~~~~~~~~~~ 134 (316)
.. .+-...-..+.|+|+++.++++. +.+|.+||+.++
T Consensus 182 ~~------------~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~----------- 238 (462)
T 2ece_A 182 ID------------RGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKR----------- 238 (462)
T ss_dssp SB------------CTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTT-----------
T ss_pred cC------------CCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCC-----------
Confidence 10 01111223578899999877764 788999999876
Q ss_pred ccccCCCcceeeCCcCCceeeeEEE-ecCCCcEEEEecc------CCeEEEEeccCCee--EEEe--ecC----------
Q 021160 135 DLQKREEPQVYSGHRNSQTVKGVNF-FGPNDEYVMSGSD------CGHLFIWKKKGGKL--VRLM--VGD---------- 193 (316)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~l~~~~~------dg~v~~wd~~~~~~--~~~~--~~~---------- 193 (316)
+..+.+...........+.| ++|++++++++++ +++|.+|....++. .+.+ ...
T Consensus 239 -----k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~ 313 (462)
T 2ece_A 239 -----KRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEIL 313 (462)
T ss_dssp -----EEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGG
T ss_pred -----cEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccc
Confidence 56666654321122445544 4899998888774 66888777665532 1111 110
Q ss_pred ------ccceEEEEEcCCCCeEEEEe-CCCcEEEecCC
Q 021160 194 ------RHVVNQLEPHPHIPMFATCG-IEKTVKLWAPM 224 (316)
Q Consensus 194 ------~~~v~~~~~~p~~~~l~s~~-~d~~i~iwd~~ 224 (316)
...+..+.++|++++|..+. ..+.|.+||+.
T Consensus 314 ~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 314 KPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp GGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECS
T ss_pred cccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 13467899999999976555 57899999986
No 228
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.83 E-value=5.3e-06 Score=70.03 Aligned_cols=202 Identities=10% Similarity=0.081 Sum_probs=120.4
Q ss_pred CCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCC-CcccEEEEEEccCCCeEEEe-cC------CcE
Q 021160 44 PRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGK-NNIHITGLAYSNTSELLISY-ND------ELV 115 (316)
Q Consensus 44 ~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~s~-~d------~~i 115 (316)
++...+++.|..++.|.++|+.+.... +..++...+..+... ....-..+...|+| +++++ .+ +.|
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~-----p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v 166 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPRE-----PKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGI 166 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTS-----CEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEE
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCC-----ceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeE
Confidence 666456667778899999999755210 111111111111101 11234567788999 76664 33 689
Q ss_pred EEEEcCCCCCCCCccCCccccccCCCcceeeCCcCC-ceeeeEEEecCCCcEEEEec-------------------cCCe
Q 021160 116 YLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNS-QTVKGVNFFGPNDEYVMSGS-------------------DCGH 175 (316)
Q Consensus 116 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~l~~~~-------------------~dg~ 175 (316)
.++|..+. +.+..+...... ..-..+.| +|+++.+++.. ...+
T Consensus 167 ~vlD~~T~----------------~v~~~~~~~~~~~~~~Yd~~~-~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~ 229 (462)
T 2ece_A 167 LMLDHYSF----------------EPLGKWEIDRGDQYLAYDFWW-NLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNR 229 (462)
T ss_dssp EEECTTTC----------------CEEEECCSBCTTCCCCCCEEE-ETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCE
T ss_pred EEEECCCC----------------eEEEEEccCCCCccccceEEE-CCCCCEEEEccCcCccccccccchhhhhhccCCE
Confidence 99999877 566666532221 12345766 89999888874 3789
Q ss_pred EEEEeccCCeeEEEeecC-c-cceEEEEE--cCCCCeEEEEe------CCCcEEEecCCCCC--------------CCCC
Q 021160 176 LFIWKKKGGKLVRLMVGD-R-HVVNQLEP--HPHIPMFATCG------IEKTVKLWAPMPTD--------------FPPL 231 (316)
Q Consensus 176 v~~wd~~~~~~~~~~~~~-~-~~v~~~~~--~p~~~~l~s~~------~d~~i~iwd~~~~~--------------~~~~ 231 (316)
|.+||+.+++.+.++... . .....+.| +|+++++..++ .+++|.+|....+. ...+
T Consensus 230 V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~l 309 (462)
T 2ece_A 230 IHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNL 309 (462)
T ss_dssp EEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSC
T ss_pred EEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccc
Confidence 999999999988888653 1 23445555 99999855544 56677665433221 1111
Q ss_pred CCCc------ccceeeeecCCCCcee-EEecCCCeEEEEEeccc
Q 021160 232 PDNA------EKIMKANKQGREDHSR-ITLTPDVIMHVLRLQRR 268 (316)
Q Consensus 232 ~~~~------~~~~~~~~~~~~~~~~-~s~~~d~~~~~w~~~~~ 268 (316)
+.-. .........+++++++ ++....+.|.++++...
T Consensus 310 p~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~ 353 (462)
T 2ece_A 310 PEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNP 353 (462)
T ss_dssp CGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSST
T ss_pred cccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCC
Confidence 1000 1112223366777655 56666799999998644
No 229
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.79 E-value=1.5e-07 Score=78.47 Aligned_cols=74 Identities=5% Similarity=-0.081 Sum_probs=57.2
Q ss_pred EEEecCCCcEEEEecc-C--------CeEEEEeccCCeeEEEeecCccceEEEEEcCCCCe-EEEEe-CCCcEEEecCCC
Q 021160 157 VNFFGPNDEYVMSGSD-C--------GHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPM-FATCG-IEKTVKLWAPMP 225 (316)
Q Consensus 157 ~~~~~~~~~~l~~~~~-d--------g~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~-l~s~~-~d~~i~iwd~~~ 225 (316)
+++ +++++.++.+.. . +.+.++|+.+.+.+..+.... ....++|+|+++. +++.. .++.|.++|+.+
T Consensus 269 v~~-s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t 346 (368)
T 1mda_H 269 VAK-LKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAAS 346 (368)
T ss_dssp EEE-ETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSS
T ss_pred eEE-cCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCC
Confidence 667 889888876543 2 356799999999988887543 5788999999985 66666 599999999998
Q ss_pred CC-CCCCC
Q 021160 226 TD-FPPLP 232 (316)
Q Consensus 226 ~~-~~~~~ 232 (316)
.+ +.+++
T Consensus 347 ~kvv~~I~ 354 (368)
T 1mda_H 347 DQDQSSVE 354 (368)
T ss_dssp CEEEEECC
T ss_pred CcEEEEEE
Confidence 87 44443
No 230
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.74 E-value=4.6e-07 Score=82.32 Aligned_cols=241 Identities=10% Similarity=0.057 Sum_probs=131.8
Q ss_pred ceeeEEEEeeCCCcceEEEec-cccccccCCCCccceEE-EEECCCCCcEEEEEe------cCCcEEEEeCcCCcccCCC
Q 021160 2 VLFNMLFDLRSDSATRLFYCS-SFSENSKQPMNSIRLNA-IVIDPRNPNYFAVGG------SDEYARVYDIRKCHWYSPI 73 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~-~~~~~~~~~gh~~~v~~-~~~~~~~~~~l~~g~------~dg~v~~wd~~~~~~~~~~ 73 (316)
+|.|.-+|..+.+..-.+... ... ....+.+ ..+. ++ .+++++ .++.|..||.++++.....
T Consensus 130 dg~l~AlDa~TG~~~W~~~~~~~~~-------~~~~~~~sP~v~-~g--~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 199 (689)
T 1yiq_A 130 DGRLEAIDAKTGQRAWSVDTRADHK-------RSYTITGAPRVV-NG--KVVIGNGGAEFGVRGYVTAYDAETGKEAWRF 199 (689)
T ss_dssp TSEEEEEETTTCCEEEEEECCSCTT-------SCCBCCSCCEEE-TT--EEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEECCCCCEeeeecCcCCCC-------CCccccCCcEEE-CC--EEEEEeCCCccCCCCEEEEEECCCCcEEEEe
Confidence 577888888887765444432 110 0011110 0111 34 444443 3689999999999854332
Q ss_pred CC--CCCceecccccc------cC--------CCcccEEEEEEccCCCeEEEe-cCC-------------------cEEE
Q 021160 74 SS--DTPVDTFCPRHL------IG--------KNNIHITGLAYSNTSELLISY-NDE-------------------LVYL 117 (316)
Q Consensus 74 ~~--~~~~~~~~~~~~------~~--------~~~~~i~~~~~~~~~~~l~s~-~d~-------------------~i~i 117 (316)
.. ..+...+....+ .. ++......+++.|++.++..+ .++ .|..
T Consensus 200 ~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~A 279 (689)
T 1yiq_A 200 YTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVA 279 (689)
T ss_dssp ESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEE
T ss_pred cccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEE
Confidence 10 001000000000 00 111112357888877755554 454 3999
Q ss_pred EEcCCCCCCCCccCCccccccCCCcceeeCCcCC-------ceeeeEEEecCCCc---EEEEeccCCeEEEEeccCCeeE
Q 021160 118 FEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNS-------QTVKGVNFFGPNDE---YVMSGSDCGHLFIWKKKGGKLV 187 (316)
Q Consensus 118 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~i~~~~~~~~~~~---~l~~~~~dg~v~~wd~~~~~~~ 187 (316)
+|..++ +.+..+...... ..+..... ..+|. .++.++.+|.++++|..+|+++
T Consensus 280 lD~~TG----------------~~~W~~~~~~~d~wd~~~~~~~~l~d~-~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 342 (689)
T 1yiq_A 280 VNADTG----------------EYVWHYQTTPGDAWDYTATQHMILAEL-PIDGKPRKVLMQAPKNGFFYVIDRATGELL 342 (689)
T ss_dssp EETTTC----------------CEEEEEESSTTCCSCCCCCSCEEEEEE-EETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred EEccCC----------------ceeEeeecCCcccccccCCCCcEEEee-ccCCcEEEEEEEECCCCeEEEEECCCCCEe
Confidence 999988 555544432110 00111122 22454 7889999999999999999987
Q ss_pred EEeecCc-c--------------------------------------ceEEEEEcCCCCeEEEEeC--------------
Q 021160 188 RLMVGDR-H--------------------------------------VVNQLEPHPHIPMFATCGI-------------- 214 (316)
Q Consensus 188 ~~~~~~~-~--------------------------------------~v~~~~~~p~~~~l~s~~~-------------- 214 (316)
....... . ....++++|+..++.....
T Consensus 343 ~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~ 422 (689)
T 1yiq_A 343 SAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPK 422 (689)
T ss_dssp EEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCC
T ss_pred ccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeecccccc
Confidence 5432110 0 0113688888777665422
Q ss_pred -------------------------------CCcEEEecCCCCCC-CCCCCCcccceeeeecCCCCceeEEecCCCeEEE
Q 021160 215 -------------------------------EKTVKLWAPMPTDF-PPLPDNAEKIMKANKQGREDHSRITLTPDVIMHV 262 (316)
Q Consensus 215 -------------------------------d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~ 262 (316)
+|.|+.||+.++++ -+.+.+ ...... .....+.+++.++.|+.++.
T Consensus 423 ~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~-~~~~~g-~~~tagglvf~gt~dg~l~a 500 (689)
T 1yiq_A 423 RNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYV-TIFNGG-TLSTAGNLVFEGSADGRVIA 500 (689)
T ss_dssp CCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEES-SSCCCC-EEEETTTEEEEECTTSEEEE
T ss_pred ccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCC-CCccCc-cceECCCEEEEECCCCcEEE
Confidence 36788899988762 222111 111111 13345678888999999999
Q ss_pred EEecccCcc
Q 021160 263 LRLQRRQTL 271 (316)
Q Consensus 263 w~~~~~~~~ 271 (316)
||.++++.+
T Consensus 501 ~D~~tG~~l 509 (689)
T 1yiq_A 501 YAADTGEKL 509 (689)
T ss_dssp EETTTCCEE
T ss_pred EECCCCccc
Confidence 999988554
No 231
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.68 E-value=6.2e-07 Score=81.28 Aligned_cols=241 Identities=9% Similarity=0.069 Sum_probs=134.0
Q ss_pred ceeeEEEEeeCCCcceEEEec-cccccccCCCCccceEE-EEECCCCCcEEEEEec------CCcEEEEeCcCCcccCCC
Q 021160 2 VLFNMLFDLRSDSATRLFYCS-SFSENSKQPMNSIRLNA-IVIDPRNPNYFAVGGS------DEYARVYDIRKCHWYSPI 73 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~-~~~~~~~~~gh~~~v~~-~~~~~~~~~~l~~g~~------dg~v~~wd~~~~~~~~~~ 73 (316)
+|.|..+|..+.+....+... ... ....+.+ .... ++ .+++++. ++.|+.+|..+++.....
T Consensus 137 dg~l~alD~~tG~~~W~~~~~~~~~-------~~~~~~~~p~v~-~~--~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~ 206 (677)
T 1kb0_A 137 DGRLIALDAATGKEVWHQNTFEGQK-------GSLTITGAPRVF-KG--KVIIGNGGAEYGVRGYITAYDAETGERKWRW 206 (677)
T ss_dssp TSEEEEEETTTCCEEEEEETTTTCC-------SSCBCCSCCEEE-TT--EEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEECCCCCEEeeecCCcCcC-------cCcccccCcEEE-CC--EEEEEecccccCCCCEEEEEECCCCcEEEEe
Confidence 467888888887765555442 111 0011111 1111 23 4555543 689999999999865332
Q ss_pred CCCCCce--------------ecc--ccccc-CCCcccEEEEEEccCCCeEEEe-cCC-------------------cEE
Q 021160 74 SSDTPVD--------------TFC--PRHLI-GKNNIHITGLAYSNTSELLISY-NDE-------------------LVY 116 (316)
Q Consensus 74 ~~~~~~~--------------~~~--~~~~~-~~~~~~i~~~~~~~~~~~l~s~-~d~-------------------~i~ 116 (316)
....+.. .+. -.... .+.......+++.|++.++..+ .++ .|.
T Consensus 207 ~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~ 286 (677)
T 1kb0_A 207 FSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIV 286 (677)
T ss_dssp ESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEE
T ss_pred ccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEE
Confidence 2111100 000 00000 0111122357788887755543 332 488
Q ss_pred EEEcCCCCCCCCccCCccccccCCCcceeeCCcC-------CceeeeEEEecCCC---cEEEEeccCCeEEEEeccCCee
Q 021160 117 LFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRN-------SQTVKGVNFFGPND---EYVMSGSDCGHLFIWKKKGGKL 186 (316)
Q Consensus 117 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~i~~~~~~~~~~---~~l~~~~~dg~v~~wd~~~~~~ 186 (316)
.+|..++ +....+..... .....-+.. ..+| ..++.++.+|.++++|..+|+.
T Consensus 287 AlD~~TG----------------~~~W~~~~~~~d~wd~~~~~~p~l~~~-~~dG~~~~~l~~~~~~G~l~~lD~~tG~~ 349 (677)
T 1kb0_A 287 ALDPDTG----------------KYKWHYQETPGDNWDYTSTQPMILADI-KIAGKPRKVILHAPKNGFFFVLDRTNGKF 349 (677)
T ss_dssp EECTTTC----------------CEEEEEESSTTCCSCCCCCSCCEEEEE-EETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred EEECCCC----------------CEEEEEecCCCcccccccCCCcEEEec-ccCCcEeeEEEEECCCCEEEEEECCCCCE
Confidence 8888887 45444442111 001122222 3366 6889999999999999999998
Q ss_pred EEEeecCc----------c-ce------------------------EEEEEcCCCCeEEEEeC-----------------
Q 021160 187 VRLMVGDR----------H-VV------------------------NQLEPHPHIPMFATCGI----------------- 214 (316)
Q Consensus 187 ~~~~~~~~----------~-~v------------------------~~~~~~p~~~~l~s~~~----------------- 214 (316)
+..+.... + .+ ..++++|+..++.....
T Consensus 350 l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~ 429 (677)
T 1kb0_A 350 ISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQA 429 (677)
T ss_dssp EEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCC
T ss_pred eccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccc
Confidence 87664211 0 01 14688998887766432
Q ss_pred --------------------------CCcEEEecCCCCCC-CCCCCCcccceeeeecCCCCceeEEecCCCeEEEEEecc
Q 021160 215 --------------------------EKTVKLWAPMPTDF-PPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQR 267 (316)
Q Consensus 215 --------------------------d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~ 267 (316)
.+.|..||+.++++ -+.+ +........ ...++.+++.++.|+.+++||..+
T Consensus 430 ~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~-~~~~~~~g~-~~~~g~~v~~g~~dg~l~a~D~~t 507 (677)
T 1kb0_A 430 GPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVE-HVSPWNGGT-LTTAGNVVFQGTADGRLVAYHAAT 507 (677)
T ss_dssp CTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEE-ESSSCCCCE-EEETTTEEEEECTTSEEEEEETTT
T ss_pred cccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecC-CCCCCcCcc-eEeCCCEEEEECCCCcEEEEECCC
Confidence 26789999988762 1221 111121111 233566778889999999999988
Q ss_pred cCcc
Q 021160 268 RQTL 271 (316)
Q Consensus 268 ~~~~ 271 (316)
++.+
T Consensus 508 G~~l 511 (677)
T 1kb0_A 508 GEKL 511 (677)
T ss_dssp CCEE
T ss_pred Ccee
Confidence 7554
No 232
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.65 E-value=1.3e-06 Score=79.12 Aligned_cols=53 Identities=9% Similarity=0.025 Sum_probs=42.7
Q ss_pred CeEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC
Q 021160 174 GHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD 227 (316)
Q Consensus 174 g~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~ 227 (316)
|.|..||+.+++.+..++.. ..+....+...+..++.++.|+.+++||.++++
T Consensus 457 g~l~A~D~~tG~~~W~~~~~-~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~ 509 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEHV-SPWNGGTLTTAGNVVFQGTADGRLVAYHAATGE 509 (677)
T ss_dssp EEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred cEEEEEeCCCCcEEeecCCC-CCCcCcceEeCCCEEEEECCCCcEEEEECCCCc
Confidence 78999999999988877633 344445566677788888999999999999887
No 233
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.64 E-value=2.2e-06 Score=67.69 Aligned_cols=178 Identities=11% Similarity=0.030 Sum_probs=116.4
Q ss_pred eeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceec
Q 021160 3 LFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTF 82 (316)
Q Consensus 3 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~ 82 (316)
+.|+++|+.+.+....+...... ....+++. +..++++.-.++.+.++|..+.+...
T Consensus 44 s~v~~iD~~tg~v~~~i~l~~~~----------fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~~----------- 100 (266)
T 2iwa_A 44 SSVRQVALQTGKVENIHKMDDSY----------FGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNIK----------- 100 (266)
T ss_dssp CEEEEEETTTCCEEEEEECCTTC----------CEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEEE-----------
T ss_pred CEEEEEECCCCCEEEEEecCCCc----------ceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEEE-----------
Confidence 57899999888766655542111 12245555 32566666678999999999887432
Q ss_pred ccccccCCCcccEEEEEEccCCC-eEEEecCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCc---eeeeEE
Q 021160 83 CPRHLIGKNNIHITGLAYSNTSE-LLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQ---TVKGVN 158 (316)
Q Consensus 83 ~~~~~~~~~~~~i~~~~~~~~~~-~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~i~~~~ 158 (316)
.+..+... ...++++|+ ++++..++.|.++|..+. +....+.....+. .++.+.
T Consensus 101 ---~i~~g~~~---g~glt~Dg~~l~vs~gs~~l~viD~~t~----------------~v~~~I~Vg~~~~p~~~~nele 158 (266)
T 2iwa_A 101 ---NFTHQMKD---GWGLATDGKILYGSDGTSILYEIDPHTF----------------KLIKKHNVKYNGHRVIRLNELE 158 (266)
T ss_dssp ---EEECCSSS---CCEEEECSSSEEEECSSSEEEEECTTTC----------------CEEEEEECEETTEECCCEEEEE
T ss_pred ---EEECCCCC---eEEEEECCCEEEEECCCCeEEEEECCCC----------------cEEEEEEECCCCcccccceeEE
Confidence 11111011 123556776 445545789999999876 4555554322111 256788
Q ss_pred EecCCCcEEEEeccCCeEEEEeccCCeeEEEeecCc-------------cceEEEEEcCCCCe-EEEEeCCCcEEEecCC
Q 021160 159 FFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR-------------HVVNQLEPHPHIPM-FATCGIEKTVKLWAPM 224 (316)
Q Consensus 159 ~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~~-------------~~v~~~~~~p~~~~-l~s~~~d~~i~iwd~~ 224 (316)
| . ++...+..-.++.|.+.|..+++.+..+.... ...+.++|+|+++. ++++....++.+-++.
T Consensus 159 ~-~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~ 236 (266)
T 2iwa_A 159 Y-I-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLH 236 (266)
T ss_dssp E-E-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEE
T ss_pred E-E-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEe
Confidence 7 5 67655555568899999999999988886321 25689999999876 6677678888888876
Q ss_pred CCC
Q 021160 225 PTD 227 (316)
Q Consensus 225 ~~~ 227 (316)
...
T Consensus 237 ~~~ 239 (266)
T 2iwa_A 237 LVR 239 (266)
T ss_dssp ECC
T ss_pred ccc
Confidence 643
No 234
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.59 E-value=5.7e-05 Score=63.26 Aligned_cols=220 Identities=8% Similarity=-0.025 Sum_probs=121.5
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 81 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 81 (316)
.|.|..+|..+.+....+..... ........ + ..+++++.++.|..+|..+++.........+...
T Consensus 112 ~g~l~a~d~~tG~~~W~~~~~~~-----------~~~~p~~~--~-~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~ 177 (376)
T 3q7m_A 112 KAQVYALNTSDGTVAWQTKVAGE-----------ALSRPVVS--D-GLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLS 177 (376)
T ss_dssp TSEEEEEETTTCCEEEEEECSSC-----------CCSCCEEE--T-TEEEEECTTSEEEEEETTTCCEEEEEECCC----
T ss_pred CCEEEEEECCCCCEEEEEeCCCc-----------eEcCCEEE--C-CEEEEEcCCCeEEEEECCCCcEEEEEeCCCCcee
Confidence 35677777776665433333211 01111122 3 4677888899999999998874322111110000
Q ss_pred cccccccCCCcccEEEEEEccCCCeEEEecCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCc-----e---
Q 021160 82 FCPRHLIGKNNIHITGLAYSNTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQ-----T--- 153 (316)
Q Consensus 82 ~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~--- 153 (316)
. .....+ ... ++.+++...++.+..+|..++ +....+....... .
T Consensus 178 ~------~~~~~~----~~~-~~~v~~g~~~g~l~~~d~~tG----------------~~~w~~~~~~~~~~~~~~~~~~ 230 (376)
T 3q7m_A 178 L------RGESAP----TTA-FGAAVVGGDNGRVSAVLMEQG----------------QMIWQQRISQATGSTEIDRLSD 230 (376)
T ss_dssp -------CCCCCC----EEE-TTEEEECCTTTEEEEEETTTC----------------CEEEEEECCC-----------C
T ss_pred e------cCCCCc----EEE-CCEEEEEcCCCEEEEEECCCC----------------cEEEEEecccCCCCcccccccc
Confidence 0 000111 111 344555567899999999877 3433333211000 0
Q ss_pred e-eeEEEecCCCcEEEEeccCCeEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCCCC-CC
Q 021160 154 V-KGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFP-PL 231 (316)
Q Consensus 154 i-~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~~~-~~ 231 (316)
+ ..... .+..++.++.++.+..+|..+|+.+..... .....+... +..+..++.++.|..+|..+++.. ..
T Consensus 231 ~~~~p~~---~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~--~~~~~~~~~--~~~l~~~~~~g~l~~~d~~tG~~~w~~ 303 (376)
T 3q7m_A 231 VDTTPVV---VNGVVFALAYNGNLTALDLRSGQIMWKREL--GSVNDFIVD--GNRIYLVDQNDRVMALTIDGGVTLWTQ 303 (376)
T ss_dssp CCCCCEE---ETTEEEEECTTSCEEEEETTTCCEEEEECC--CCEEEEEEE--TTEEEEEETTCCEEEEETTTCCEEEEE
T ss_pred cCCCcEE---ECCEEEEEecCcEEEEEECCCCcEEeeccC--CCCCCceEE--CCEEEEEcCCCeEEEEECCCCcEEEee
Confidence 0 11111 256777888899999999999998766542 233444443 556777778999999999887621 11
Q ss_pred CCCcccceeeeecCCCCceeEEecCCCeEEEEEecccCcc
Q 021160 232 PDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTL 271 (316)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~~~ 271 (316)
.......... ....+..++.++.++.+..+|..+++..
T Consensus 304 ~~~~~~~~~~--~~~~~~~l~v~~~~g~l~~~d~~tG~~~ 341 (376)
T 3q7m_A 304 SDLLHRLLTS--PVLYNGNLVVGDSEGYLHWINVEDGRFV 341 (376)
T ss_dssp CTTTTSCCCC--CEEETTEEEEECTTSEEEEEETTTCCEE
T ss_pred cccCCCcccC--CEEECCEEEEEeCCCeEEEEECCCCcEE
Confidence 1011111000 0012457778888999999998887544
No 235
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.56 E-value=6.4e-05 Score=58.81 Aligned_cols=150 Identities=15% Similarity=0.178 Sum_probs=100.9
Q ss_pred eEEEEECCCCCcEEEEEecCC--cEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCC-eEEE-ecC
Q 021160 37 LNAIVIDPRNPNYFAVGGSDE--YARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE-LLIS-YND 112 (316)
Q Consensus 37 v~~~~~~~~~~~~l~~g~~dg--~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~s-~~d 112 (316)
...+.|+ ++ .++.+.+.+| .|+.+|+.+++...... + .. ...-..++. ++. +.+. -.+
T Consensus 45 tqGL~~~-~~-~LyestG~~g~S~v~~vD~~Tgkv~~~~~------------l-~~-~~FgeGit~--~g~~ly~ltw~~ 106 (262)
T 3nol_A 45 TEGFFYR-NG-YFYESTGLNGRSSIRKVDIESGKTLQQIE------------L-GK-RYFGEGISD--WKDKIVGLTWKN 106 (262)
T ss_dssp EEEEEEE-TT-EEEEEEEETTEEEEEEECTTTCCEEEEEE------------C-CT-TCCEEEEEE--ETTEEEEEESSS
T ss_pred cceEEEE-CC-EEEEECCCCCCceEEEEECCCCcEEEEEe------------c-CC-ccceeEEEE--eCCEEEEEEeeC
Confidence 4788998 56 6777777766 89999999998532211 1 11 111123333 344 3333 369
Q ss_pred CcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCeeEEEeec
Q 021160 113 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVG 192 (316)
Q Consensus 113 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~ 192 (316)
+.+.+||..+. +.+..+..... -..+++ ++..|+....++.|.++|..+.+.+..+..
T Consensus 107 ~~v~v~D~~t~----------------~~~~ti~~~~e---G~glt~---dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V 164 (262)
T 3nol_A 107 GLGFVWNIRNL----------------RQVRSFNYDGE---GWGLTH---NDQYLIMSDGTPVLRFLDPESLTPVRTITV 164 (262)
T ss_dssp SEEEEEETTTC----------------CEEEEEECSSC---CCCEEE---CSSCEEECCSSSEEEEECTTTCSEEEEEEC
T ss_pred CEEEEEECccC----------------cEEEEEECCCC---ceEEec---CCCEEEEECCCCeEEEEcCCCCeEEEEEEe
Confidence 99999999887 67777765332 244543 566676666688999999999998887754
Q ss_pred Cc-----cceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC
Q 021160 193 DR-----HVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD 227 (316)
Q Consensus 193 ~~-----~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~ 227 (316)
.. ..++.+.|. +++.++..-.+..|.+.|+++++
T Consensus 165 ~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~ 203 (262)
T 3nol_A 165 TAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGK 203 (262)
T ss_dssp EETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCB
T ss_pred ccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCc
Confidence 21 335567886 67666666578899999999886
No 236
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.56 E-value=3.4e-06 Score=66.00 Aligned_cols=165 Identities=10% Similarity=0.080 Sum_probs=104.6
Q ss_pred eeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceec
Q 021160 3 LFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTF 82 (316)
Q Consensus 3 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~ 82 (316)
..|+++|+.+.+....+... .......+.+.+..+++..-.++.+.+||..+.+.... +
T Consensus 65 S~v~~vD~~Tgkv~~~~~l~------------~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~t---------i 123 (262)
T 3nol_A 65 SSIRKVDIESGKTLQQIELG------------KRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRS---------F 123 (262)
T ss_dssp EEEEEECTTTCCEEEEEECC------------TTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEE---------E
T ss_pred ceEEEEECCCCcEEEEEecC------------CccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEE---------E
Confidence 37899999988876665542 12223222233435556666789999999998874321 1
Q ss_pred ccccccCCCcccEEEEEEccCCCeE-EEecCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCce---eeeEE
Q 021160 83 CPRHLIGKNNIHITGLAYSNTSELL-ISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQT---VKGVN 158 (316)
Q Consensus 83 ~~~~~~~~~~~~i~~~~~~~~~~~l-~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---i~~~~ 158 (316)
. ... ....+.++++.| ++..++.|.++|..+. +....+....+... ++.+.
T Consensus 124 ~-----~~~----eG~glt~dg~~L~~SdGs~~i~~iDp~T~----------------~v~~~I~V~~~g~~~~~lNELe 178 (262)
T 3nol_A 124 N-----YDG----EGWGLTHNDQYLIMSDGTPVLRFLDPESL----------------TPVRTITVTAHGEELPELNELE 178 (262)
T ss_dssp E-----CSS----CCCCEEECSSCEEECCSSSEEEEECTTTC----------------SEEEEEECEETTEECCCEEEEE
T ss_pred E-----CCC----CceEEecCCCEEEEECCCCeEEEEcCCCC----------------eEEEEEEeccCCccccccceeE
Confidence 1 111 112333566644 4434788999999877 55555554322122 45677
Q ss_pred EecCCCcEEEEeccCCeEEEEeccCCeeEEEeecC------------ccceEEEEEcCCCCeEEEEeCC
Q 021160 159 FFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGD------------RHVVNQLEPHPHIPMFATCGIE 215 (316)
Q Consensus 159 ~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~------------~~~v~~~~~~p~~~~l~s~~~d 215 (316)
| . +|...+..-.+..|.+.|.++++.+..+... ....+.+||+|+++.|...+..
T Consensus 179 ~-~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 179 W-V-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp E-E-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred E-E-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence 7 4 6766665557889999999999998887632 1245889999988886666643
No 237
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.56 E-value=1.2e-05 Score=67.38 Aligned_cols=223 Identities=10% Similarity=0.057 Sum_probs=122.1
Q ss_pred cEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEecCCcEEEEEcCCCCCCC
Q 021160 48 NYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDELVYLFEKNMGLGPS 127 (316)
Q Consensus 48 ~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~ 127 (316)
..+++++.++.|..+|..+++............ ........+.+.....++.+++.+.++.|+.+|..++
T Consensus 54 ~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~------~~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~tG---- 123 (376)
T 3q7m_A 54 NVVYAADRAGLVKALNADDGKEIWSVSLAEKDG------WFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDG---- 123 (376)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECCC---------CCSCCCCCEEEEEEEETTEEEEEETTSEEEEEETTTC----
T ss_pred CEEEEEcCCCeEEEEEccCCceeeeecCccccc------cccccCcccccCceEeCCEEEEEcCCCEEEEEECCCC----
Confidence 467778888999999999887432211100000 0000012232222233455666678999999999887
Q ss_pred CccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCeeEEEeecCccce-----EEEEE
Q 021160 128 PLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVV-----NQLEP 202 (316)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~~~~v-----~~~~~ 202 (316)
+....+...... ...... . +..++.++.++.+..+|..+|+.+.......... .....
T Consensus 124 ------------~~~W~~~~~~~~--~~~p~~-~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~ 186 (376)
T 3q7m_A 124 ------------TVAWQTKVAGEA--LSRPVV-S--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTT 186 (376)
T ss_dssp ------------CEEEEEECSSCC--CSCCEE-E--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEE
T ss_pred ------------CEEEEEeCCCce--EcCCEE-E--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEE
Confidence 444444433211 222222 2 4578888899999999999999887765432111 12222
Q ss_pred cCCCCeEEEEeCCCcEEEecCCCCCCC-CC--CCCc-----ccceeeeecCC--CCceeEEecCCCeEEEEEecccCcce
Q 021160 203 HPHIPMFATCGIEKTVKLWAPMPTDFP-PL--PDNA-----EKIMKANKQGR--EDHSRITLTPDVIMHVLRLQRRQTLA 272 (316)
Q Consensus 203 ~p~~~~l~s~~~d~~i~iwd~~~~~~~-~~--~~~~-----~~~~~~~~~~~--~~~~~~s~~~d~~~~~w~~~~~~~~~ 272 (316)
. +..++.+..++.+..+|..+++.. .. .... ..+.... ..+ .+..+..++.++.+..+|..+++..
T Consensus 187 ~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~- 262 (376)
T 3q7m_A 187 A--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVD-TTPVVVNGVVFALAYNGNLTALDLRSGQIM- 262 (376)
T ss_dssp E--TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCC-CCCEEETTEEEEECTTSCEEEEETTTCCEE-
T ss_pred E--CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccC-CCcEEECCEEEEEecCcEEEEEECCCCcEE-
Confidence 2 345677778899999999877621 11 1000 0000000 111 2445666677888888888776433
Q ss_pred eE-E------eecccccccccCCCCeEEEEeccCCC
Q 021160 273 YR-E------RRYNAADFESDEEEGETYLLGFSDSD 301 (316)
Q Consensus 273 ~~-~------~~~~~~~~~~~~~~~~v~~~~~~~~~ 301 (316)
+. . .......+.....++.++.+|..+++
T Consensus 263 w~~~~~~~~~~~~~~~~l~~~~~~g~l~~~d~~tG~ 298 (376)
T 3q7m_A 263 WKRELGSVNDFIVDGNRIYLVDQNDRVMALTIDGGV 298 (376)
T ss_dssp EEECCCCEEEEEEETTEEEEEETTCCEEEEETTTCC
T ss_pred eeccCCCCCCceEECCEEEEEcCCCeEEEEECCCCc
Confidence 22 1 11122333333455668888876665
No 238
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.55 E-value=2.7e-06 Score=74.21 Aligned_cols=191 Identities=9% Similarity=-0.019 Sum_probs=114.9
Q ss_pred eeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEE-C-CCCCcEEEEEe------------------cCCcEEEE
Q 021160 3 LFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVI-D-PRNPNYFAVGG------------------SDEYARVY 62 (316)
Q Consensus 3 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~-~-~~~~~~l~~g~------------------~dg~v~~w 62 (316)
+.|.+.|+.+.+..+++.+... .....+++ . |++ .++++++ .++.+.+.
T Consensus 112 ~rVavIdl~t~~~~~ii~ip~g----------~~phg~~~~~~p~~-~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvI 180 (595)
T 1fwx_A 112 TRVARVRCDVMKCDAILEIPNA----------KGIHGLRPQKWPRS-NYVFCNGEDETPLVNDGTNMEDVANYVNVFTAV 180 (595)
T ss_dssp TEEEEEETTTTEEEEEEECSSC----------CSEEEEEECCSSBC-SEEEEEECSCEESSCSSSSTTCGGGEEEEEEEE
T ss_pred CEEEEEECCCceEeeEEeCCCC----------CCCcceeeeecCCC-cEEEEecccccccCCCCcccccccccCceEEEE
Confidence 3578888888887776655422 35778887 4 888 6777663 34678999
Q ss_pred eCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEE-ec-C--------------CcEEEEEcCCCC--
Q 021160 63 DIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLIS-YN-D--------------ELVYLFEKNMGL-- 124 (316)
Q Consensus 63 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s-~~-d--------------~~i~iwd~~~~~-- 124 (316)
|..+.+.. .++.-+ .....++++|+|+++++ +. . ..|.+.|.....
T Consensus 181 D~~t~~v~--------------~qI~Vg--g~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~ 244 (595)
T 1fwx_A 181 DADKWEVA--------------WQVLVS--GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKA 244 (595)
T ss_dssp ETTTTEEE--------------EEEEES--SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHH
T ss_pred ECCCCeEE--------------EEEEeC--CCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEe
Confidence 99887632 222111 12345678899986555 32 2 225555543211
Q ss_pred -----CCCCccCCcccccc--CCC-cceeeCCcCCceeeeEEEecCCCcEEEEec-cCCeEEEEeccCCe----------
Q 021160 125 -----GPSPLSLSPEDLQK--REE-PQVYSGHRNSQTVKGVNFFGPNDEYVMSGS-DCGHLFIWKKKGGK---------- 185 (316)
Q Consensus 125 -----~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~-~dg~v~~wd~~~~~---------- 185 (316)
......+.+-+..+ .+. +..+.... ...++.+ +|||+++++++ .+.+|.++|+.+.+
T Consensus 245 v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~---~PhGv~~-sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~ 320 (595)
T 1fwx_A 245 IAAGDYQELNGVKVVDGRKEASSLFTRYIPIAN---NPHGCNM-APDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPR 320 (595)
T ss_dssp HHHTCSEEETTEEEEECSGGGCCSSEEEEEEES---SCCCEEE-CTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGG
T ss_pred ccCCCeeEECcEEEEeCcccCCceeEEEEecCC---CceEEEE-cCCCCEEEEeCCCCCeEEEEECcccccccccccCcc
Confidence 00001111122222 122 22333221 2577888 99999877665 58899999998653
Q ss_pred --eEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCC
Q 021160 186 --LVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMP 225 (316)
Q Consensus 186 --~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~ 225 (316)
....+.. ......++|+|+|...++.-.|+.|.+||+..
T Consensus 321 ~~v~~~v~v-G~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 321 SAVVAEPEL-GLGPLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp GGEEECCBC-CSCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred cceEEEcCC-CCCcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 2333332 24578899999994466777899999999876
No 239
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.54 E-value=3e-05 Score=60.69 Aligned_cols=151 Identities=15% Similarity=0.125 Sum_probs=103.4
Q ss_pred ceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEE-ecCCc
Q 021160 36 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLIS-YNDEL 114 (316)
Q Consensus 36 ~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s-~~d~~ 114 (316)
-...+.|+. + .++.+.+.+|.|+++|+++++....+ + .. ...-..+++.. +++++. -.++.
T Consensus 56 ftqGL~~~~-~-~Ly~stG~~g~v~~iD~~Tgkv~~~~-------------l-~~-~~FgeGit~~g-~~Ly~ltw~~~~ 117 (268)
T 3nok_A 56 FTQGLVFHQ-G-HFFESTGHQGTLRQLSLESAQPVWME-------------R-LG-NIFAEGLASDG-ERLYQLTWTEGL 117 (268)
T ss_dssp CEEEEEEET-T-EEEEEETTTTEEEECCSSCSSCSEEE-------------E-CT-TCCEEEEEECS-SCEEEEESSSCE
T ss_pred ccceEEEEC-C-EEEEEcCCCCEEEEEECCCCcEEeEE-------------C-CC-CcceeEEEEeC-CEEEEEEccCCE
Confidence 346888874 4 78888888899999999999843211 1 11 11112344432 234444 46999
Q ss_pred EEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCeeEEEeecC-
Q 021160 115 VYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGD- 193 (316)
Q Consensus 115 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~- 193 (316)
+.+||..+. +.+..+..... -..+++ +++.|+.+..++.|.++|..+.+.+..+...
T Consensus 118 v~V~D~~Tl----------------~~~~ti~~~~e---GwGLt~---Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~ 175 (268)
T 3nok_A 118 LFTWSGMPP----------------QRERTTRYSGE---GWGLCY---WNGKLVRSDGGTMLTFHEPDGFALVGAVQVKL 175 (268)
T ss_dssp EEEEETTTT----------------EEEEEEECSSC---CCCEEE---ETTEEEEECSSSEEEEECTTTCCEEEEEECEE
T ss_pred EEEEECCcC----------------cEEEEEeCCCc---eeEEec---CCCEEEEECCCCEEEEEcCCCCeEEEEEEeCC
Confidence 999999887 67777765332 245554 5677777777999999999999988877532
Q ss_pred -c---cceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC
Q 021160 194 -R---HVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD 227 (316)
Q Consensus 194 -~---~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~ 227 (316)
. ..++.+.|. +++.++..-.+..|.+-|+++++
T Consensus 176 ~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~ 212 (268)
T 3nok_A 176 RGQPVELINELECA-NGVIYANIWHSSDVLEIDPATGT 212 (268)
T ss_dssp TTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCB
T ss_pred CCcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCc
Confidence 1 245677887 67666666578899999999886
No 240
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.54 E-value=7.9e-05 Score=59.21 Aligned_cols=156 Identities=11% Similarity=-0.009 Sum_probs=94.2
Q ss_pred ccEEEEEEccCCC-eEEEe-cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCc-EEEE
Q 021160 93 IHITGLAYSNTSE-LLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDE-YVMS 169 (316)
Q Consensus 93 ~~i~~~~~~~~~~-~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~~ 169 (316)
.....++|++++. ++++. ..+.|..+++... .....+..... ....+++ ++++. +.++
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~----------------~~~~~~~~~~~--~p~~ia~-d~~~~~lyv~ 96 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGG----------------EPTTIIRQDLG--SPEGIAL-DHLGRTIFWT 96 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSC----------------CCEEEECTTCC--CEEEEEE-ETTTTEEEEE
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCC----------------CcEEEEECCCC--CccEEEE-EecCCeEEEE
Confidence 3567999999765 55553 5889999998765 22222222222 2788998 77654 4455
Q ss_pred eccCCeEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEe-C--CCcEEEecCCCCCCCCCC-CCcccceeeeecC
Q 021160 170 GSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCG-I--EKTVKLWAPMPTDFPPLP-DNAEKIMKANKQG 245 (316)
Q Consensus 170 ~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~-~--d~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~ 245 (316)
-...+.|.++++..................++++|++..|..+. . .+.|..+++.......+. ........++ +.
T Consensus 97 d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia-~d 175 (267)
T 1npe_A 97 DSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLT-FD 175 (267)
T ss_dssp ETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEE-EE
T ss_pred ECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEE-Ec
Confidence 55678999999874332222222224678999999665544433 2 367888887654322221 1111222333 45
Q ss_pred C-CCceeEEecCCCeEEEEEeccc
Q 021160 246 R-EDHSRITLTPDVIMHVLRLQRR 268 (316)
Q Consensus 246 ~-~~~~~~s~~~d~~~~~w~~~~~ 268 (316)
+ .+.++++-...+.|.++++...
T Consensus 176 ~~~~~lyv~d~~~~~I~~~~~~g~ 199 (267)
T 1npe_A 176 AFSSQLCWVDAGTHRAECLNPAQP 199 (267)
T ss_dssp TTTTEEEEEETTTTEEEEEETTEE
T ss_pred CCCCEEEEEECCCCEEEEEecCCC
Confidence 5 4566777778889999987654
No 241
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.50 E-value=2.5e-05 Score=60.49 Aligned_cols=153 Identities=8% Similarity=0.034 Sum_probs=100.6
Q ss_pred cceEEEEECCCCCcEEEEEecC--CcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEE-ec
Q 021160 35 IRLNAIVIDPRNPNYFAVGGSD--EYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLIS-YN 111 (316)
Q Consensus 35 ~~v~~~~~~~~~~~~l~~g~~d--g~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s-~~ 111 (316)
.-...+.|++ + .++.+.+.+ ..|+.+|+.+++...... + .. ...-..++... +++++. -.
T Consensus 21 ~ftqGL~~~~-~-~LyestG~~g~S~v~~vD~~tgkv~~~~~------------l-~~-~~fgeGi~~~~-~~ly~ltw~ 83 (243)
T 3mbr_X 21 AFTEGLFYLR-G-HLYESTGETGRSSVRKVDLETGRILQRAE------------V-PP-PYFGAGIVAWR-DRLIQLTWR 83 (243)
T ss_dssp CCEEEEEEET-T-EEEEEECCTTSCEEEEEETTTCCEEEEEE------------C-CT-TCCEEEEEEET-TEEEEEESS
T ss_pred cccccEEEEC-C-EEEEECCCCCCceEEEEECCCCCEEEEEe------------C-CC-CcceeEEEEeC-CEEEEEEee
Confidence 3467899987 4 666776665 489999999998532211 1 11 11112333332 333333 36
Q ss_pred CCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCeeEEEee
Q 021160 112 DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMV 191 (316)
Q Consensus 112 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~ 191 (316)
++.+.+||..+. +.+..+..... -..++. ++..|+.+..++.|.++|..+.+.+..+.
T Consensus 84 ~~~v~v~D~~tl----------------~~~~ti~~~~~---Gwglt~---dg~~L~vSdgs~~l~~iDp~t~~~~~~I~ 141 (243)
T 3mbr_X 84 NHEGFVYDLATL----------------TPRARFRYPGE---GWALTS---DDSHLYMSDGTAVIRKLDPDTLQQVGSIK 141 (243)
T ss_dssp SSEEEEEETTTT----------------EEEEEEECSSC---CCEEEE---CSSCEEEECSSSEEEEECTTTCCEEEEEE
T ss_pred CCEEEEEECCcC----------------cEEEEEeCCCC---ceEEee---CCCEEEEECCCCeEEEEeCCCCeEEEEEE
Confidence 999999999887 67777765432 245543 56666666678999999999999888776
Q ss_pred cCc-----cceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC
Q 021160 192 GDR-----HVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD 227 (316)
Q Consensus 192 ~~~-----~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~ 227 (316)
... ..++.+.|. +++.++..-.+..|.+.|+++++
T Consensus 142 V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~ 181 (243)
T 3mbr_X 142 VTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGK 181 (243)
T ss_dssp CEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCB
T ss_pred EccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCC
Confidence 422 345667776 66666665567899999998876
No 242
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.50 E-value=3.7e-06 Score=69.02 Aligned_cols=187 Identities=11% Similarity=0.022 Sum_probs=102.5
Q ss_pred ceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEecCCcE
Q 021160 36 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDELV 115 (316)
Q Consensus 36 ~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d~~i 115 (316)
.+.++...+++ .+..++.++.|..+|.. ++... .. ......+.++...+++.+++++ +.|
T Consensus 138 ~~~~~~~~~~g--~l~vgt~~~~l~~~d~~-g~~~~--------------~~-~~~~~~~~~~~~d~~g~l~v~t--~~l 197 (330)
T 3hxj_A 138 IYATPIVSEDG--TIYVGSNDNYLYAINPD-GTEKW--------------RF-KTNDAITSAASIGKDGTIYFGS--DKV 197 (330)
T ss_dssp CCSCCEECTTS--CEEEECTTSEEEEECTT-SCEEE--------------EE-ECSSCCCSCCEECTTCCEEEES--SSE
T ss_pred eeeeeEEcCCC--EEEEEcCCCEEEEECCC-CCEeE--------------EE-ecCCCceeeeEEcCCCEEEEEe--CEE
Confidence 34556666665 35667777888888887 54211 00 1112334556666777766666 788
Q ss_pred EEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCeeEEEeecCcc
Q 021160 116 YLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRH 195 (316)
Q Consensus 116 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~~~ 195 (316)
..+| .++ +....+...... +.++.. .+++. +..++.++.+..++. +++.+..+.....
T Consensus 198 ~~~d-~~g----------------~~~~~~~~~~~~--~~~~~~-~~~g~-l~v~t~~~gl~~~~~-~g~~~~~~~~~~~ 255 (330)
T 3hxj_A 198 YAIN-PDG----------------TEKWNFYAGYWT--VTRPAI-SEDGT-IYVTSLDGHLYAINP-DGTEKWRFKTGKR 255 (330)
T ss_dssp EEEC-TTS----------------CEEEEECCSSCC--CSCCEE-CTTSC-EEEEETTTEEEEECT-TSCEEEEEECSSC
T ss_pred EEEC-CCC----------------cEEEEEccCCcc--eeceEE-CCCCe-EEEEcCCCeEEEECC-CCCEeEEeeCCCC
Confidence 8888 444 233333333322 677776 66664 555666778888874 4665655554444
Q ss_pred ceEEEEEcCCCCeEEEEeCCCcEEEecCCCCCCCCCCCCcccceeeeecCCCCceeEEecCCCeEEEEEecc
Q 021160 196 VVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQR 267 (316)
Q Consensus 196 ~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~ 267 (316)
.+..+.+.+++. |..++.++.|..+|........+......+ .......++ .+..++.+|.+++...+.
T Consensus 256 ~~~~~~~~~~g~-l~v~t~~ggl~~~d~~g~~~~~~~~~~~~~-~~~~~d~~g-~l~~gt~~G~~~~~~~~~ 324 (330)
T 3hxj_A 256 IESSPVIGNTDT-IYFGSYDGHLYAINPDGTEKWNFETGSWII-ATPVIDENG-TIYFGTRNGKFYALFNLE 324 (330)
T ss_dssp CCSCCEECTTSC-EEEECTTCEEEEECTTSCEEEEEECSSCCC-SCCEECTTC-CEEEECTTSCEEEEEC--
T ss_pred ccccceEcCCCe-EEEecCCCCEEEECCCCcEEEEEEcCCccc-cceEEcCCC-EEEEEcCCCeEEEEeccc
Confidence 444566665554 555666778888886322222111111111 111122333 455577788877776543
No 243
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.50 E-value=1.4e-05 Score=62.51 Aligned_cols=161 Identities=9% Similarity=-0.004 Sum_probs=104.6
Q ss_pred ceeeEEEEeeCCCcceEEEeccccccccCCCCccceE--EEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCc
Q 021160 2 VLFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLN--AIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPV 79 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~--~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~ 79 (316)
.|.|+++|+.+.+....+ ... ... .+++. +..++...-.++.+.+||..+.+...+
T Consensus 74 ~g~v~~iD~~Tgkv~~~~-l~~------------~~FgeGit~~--g~~Ly~ltw~~~~v~V~D~~Tl~~~~t------- 131 (268)
T 3nok_A 74 QGTLRQLSLESAQPVWME-RLG------------NIFAEGLASD--GERLYQLTWTEGLLFTWSGMPPQRERT------- 131 (268)
T ss_dssp TTEEEECCSSCSSCSEEE-ECT------------TCCEEEEEEC--SSCEEEEESSSCEEEEEETTTTEEEEE-------
T ss_pred CCEEEEEECCCCcEEeEE-CCC------------CcceeEEEEe--CCEEEEEEccCCEEEEEECCcCcEEEE-------
Confidence 467999999998876666 431 222 35554 335666667889999999998874322
Q ss_pred eecccccccCCCcccEEEEEEccCCCeEEE-ecCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCc---eee
Q 021160 80 DTFCPRHLIGKNNIHITGLAYSNTSELLIS-YNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQ---TVK 155 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~i~ 155 (316)
+.. .+. + ..++ ++++.|+. ..++.|.++|..+. +....+.....+. .++
T Consensus 132 --i~~----~~e-G--wGLt--~Dg~~L~vSdGs~~l~~iDp~T~----------------~v~~~I~V~~~g~~v~~lN 184 (268)
T 3nok_A 132 --TRY----SGE-G--WGLC--YWNGKLVRSDGGTMLTFHEPDGF----------------ALVGAVQVKLRGQPVELIN 184 (268)
T ss_dssp --EEC----SSC-C--CCEE--EETTEEEEECSSSEEEEECTTTC----------------CEEEEEECEETTEECCCEE
T ss_pred --EeC----CCc-e--eEEe--cCCCEEEEECCCCEEEEEcCCCC----------------eEEEEEEeCCCCccccccc
Confidence 111 111 1 2333 56665544 35889999999887 5555555433222 256
Q ss_pred eEEEecCCCcEEEEeccCCeEEEEeccCCeeEEEeecC-------------ccceEEEEEcCCCCeEEEEe
Q 021160 156 GVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGD-------------RHVVNQLEPHPHIPMFATCG 213 (316)
Q Consensus 156 ~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~-------------~~~v~~~~~~p~~~~l~s~~ 213 (316)
.+.| . +|...+..-.+..|.+.|.++++.+..+... ....+.+|++|+++.|...+
T Consensus 185 eLe~-~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 185 ELEC-A-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EEEE-E-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred ccEE-e-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 6777 4 6766655557889999999999998887532 13568899999876655444
No 244
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.49 E-value=8e-06 Score=74.19 Aligned_cols=54 Identities=11% Similarity=0.055 Sum_probs=43.3
Q ss_pred CCeEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC
Q 021160 173 CGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD 227 (316)
Q Consensus 173 dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~ 227 (316)
+|.|+.||+.+++.+..++.+. .+....+...+..++.++.|+.++.||.++++
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~ 507 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGRVIAYAADTGE 507 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred ceeEEEEECCCCCeEeEccCCC-CccCccceECCCEEEEECCCCcEEEEECCCCc
Confidence 3789999999999988877554 23333555677788889999999999999987
No 245
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.47 E-value=0.00031 Score=57.37 Aligned_cols=222 Identities=8% Similarity=-0.029 Sum_probs=126.4
Q ss_pred eeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceec
Q 021160 3 LFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTF 82 (316)
Q Consensus 3 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~ 82 (316)
..|+..|+.+.+...++ .. .....+++|++.+..++.+-...+.|..+++...... .
T Consensus 10 ~~I~~i~~~~~~~~~~~--~~----------~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~------~----- 66 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLI--PN----------LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV------S----- 66 (316)
T ss_dssp SSEEEEETTSCCCEEEE--CS----------CSSEEEEEEETTTTEEEEEETTTTEEEEEEC------------------
T ss_pred CeEEEEECCCcceEehh--cC----------CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCC------c-----
Confidence 35777787765543332 11 2357899999876456666667789999998752100 0
Q ss_pred ccccccCCCcccEEEEEEccCC-CeEEE-ecCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEe
Q 021160 83 CPRHLIGKNNIHITGLAYSNTS-ELLIS-YNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFF 160 (316)
Q Consensus 83 ~~~~~~~~~~~~i~~~~~~~~~-~~l~s-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 160 (316)
....+..........+++.+.+ +++++ ...+.|.++++... .....+..... ....+++
T Consensus 67 ~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~----------------~~~~~~~~~~~--~P~~iav- 127 (316)
T 1ijq_A 67 SYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV----------------KRKTLFRENGS--KPRAIVV- 127 (316)
T ss_dssp -CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS----------------SEEEEEECTTC--CEEEEEE-
T ss_pred ccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCC----------------ceEEEEECCCC--CcceEEe-
Confidence 0011111112334688888654 45556 46889999998754 22222222222 3788888
Q ss_pred cCCCcEEEEec-cC-CeEEEEeccCCeeEEEee-cCccceEEEEEcCCCCeEE-EEeCCCcEEEecCCCCCCCCCCC---
Q 021160 161 GPNDEYVMSGS-DC-GHLFIWKKKGGKLVRLMV-GDRHVVNQLEPHPHIPMFA-TCGIEKTVKLWAPMPTDFPPLPD--- 233 (316)
Q Consensus 161 ~~~~~~l~~~~-~d-g~v~~wd~~~~~~~~~~~-~~~~~v~~~~~~p~~~~l~-s~~~d~~i~iwd~~~~~~~~~~~--- 233 (316)
.|.+..|+... .. +.|...++. |+....+. ..-.....++++|++..|. +-+..+.|..+|+.......+..
T Consensus 128 dp~~g~ly~~d~~~~~~I~~~~~d-G~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~ 206 (316)
T 1ijq_A 128 DPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEK 206 (316)
T ss_dssp ETTTTEEEEEECSSSCEEEEEETT-SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTT
T ss_pred CCCCCEEEEEccCCCCeEEEEcCC-CCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCC
Confidence 77655554443 33 688888876 44333332 2234678999998776654 44566789999987644322211
Q ss_pred CcccceeeeecCCCCceeEEecCCCeEEEEEecccC
Q 021160 234 NAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQ 269 (316)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~ 269 (316)
.......++. .++.++++-...+.|..++..+++
T Consensus 207 ~~~~P~giav--~~~~ly~~d~~~~~V~~~~~~~g~ 240 (316)
T 1ijq_A 207 RLAHPFSLAV--FEDKVFWTDIINEAIFSANRLTGS 240 (316)
T ss_dssp TTSSEEEEEE--ETTEEEEEETTTTEEEEEETTTCC
T ss_pred ccCCcEEEEE--ECCEEEEEECCCCeEEEEeCCCCc
Confidence 1111223332 245677777777888877765443
No 246
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.47 E-value=6.1e-06 Score=67.69 Aligned_cols=174 Identities=10% Similarity=0.074 Sum_probs=100.9
Q ss_pred EEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEecCCcEEEEEcCCCCCCCC
Q 021160 49 YFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDELVYLFEKNMGLGPSP 128 (316)
Q Consensus 49 ~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~ 128 (316)
.+..++.++.|..+|.. ++... .. ......+.++...+++.+++++.++.|..+|.. +
T Consensus 109 ~l~v~t~~~~l~~~d~~-g~~~~--------------~~-~~~~~~~~~~~~~~~g~l~vgt~~~~l~~~d~~-g----- 166 (330)
T 3hxj_A 109 ILYVTSMDGHLYAINTD-GTEKW--------------RF-KTKKAIYATPIVSEDGTIYVGSNDNYLYAINPD-G----- 166 (330)
T ss_dssp EEEEECTTSEEEEECTT-SCEEE--------------EE-ECSSCCCSCCEECTTSCEEEECTTSEEEEECTT-S-----
T ss_pred EEEEEecCCEEEEEcCC-CCEEE--------------EE-cCCCceeeeeEEcCCCEEEEEcCCCEEEEECCC-C-----
Confidence 45566666777777766 43110 00 111223444556667777777677888888887 5
Q ss_pred ccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCeeEEEeecCccceEEEEEcCCCCe
Q 021160 129 LSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPM 208 (316)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ 208 (316)
+....+...... +.++.. .+++.++ .++ +.+..+| .+++...........+.++...+++.+
T Consensus 167 -----------~~~~~~~~~~~~--~~~~~~-d~~g~l~-v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l 228 (330)
T 3hxj_A 167 -----------TEKWRFKTNDAI--TSAASI-GKDGTIY-FGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTI 228 (330)
T ss_dssp -----------CEEEEEECSSCC--CSCCEE-CTTCCEE-EES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCE
T ss_pred -----------CEeEEEecCCCc--eeeeEE-cCCCEEE-EEe--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeE
Confidence 344444433322 666666 6677654 444 7899999 777777666655566888888888765
Q ss_pred EEEEeCCCcEEEecCCCCCCCCCCCCcccceeeeecCCCCceeEEecCCCeEEEEEe
Q 021160 209 FATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRL 265 (316)
Q Consensus 209 l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~ 265 (316)
. .++.++.+..++.....+..+..... ......... +..+..++.++.+..++.
T Consensus 229 ~-v~t~~~gl~~~~~~g~~~~~~~~~~~-~~~~~~~~~-~g~l~v~t~~ggl~~~d~ 282 (330)
T 3hxj_A 229 Y-VTSLDGHLYAINPDGTEKWRFKTGKR-IESSPVIGN-TDTIYFGSYDGHLYAINP 282 (330)
T ss_dssp E-EEETTTEEEEECTTSCEEEEEECSSC-CCSCCEECT-TSCEEEECTTCEEEEECT
T ss_pred E-EEcCCCeEEEECCCCCEeEEeeCCCC-ccccceEcC-CCeEEEecCCCCEEEECC
Confidence 4 45567788888854433222211111 111111222 335566677777888874
No 247
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.47 E-value=2.4e-05 Score=71.88 Aligned_cols=194 Identities=10% Similarity=0.086 Sum_probs=107.6
Q ss_pred ceEEEEEC-CCCCcEEEEEe-cCC----cEEEEeCcCC-cccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEE
Q 021160 36 RLNAIVID-PRNPNYFAVGG-SDE----YARVYDIRKC-HWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLI 108 (316)
Q Consensus 36 ~v~~~~~~-~~~~~~l~~g~-~dg----~v~~wd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 108 (316)
.+...+|+ |+| ++||.+. .+| .|+++|+.++ +.. ...+ ......++|+|+|+.|+
T Consensus 175 ~~~~~~~S~PDG-~~lAy~~~~~G~~~~~l~v~dl~~g~~~l-------------~~~~----~~~~~~~~WspDg~~l~ 236 (751)
T 2xe4_A 175 DVMEVKPAPPEH-DLVAFSVDMSGNEVYTIEFKRISDPSQTI-------------ADKV----SGTNGEIVWGPDHTSLF 236 (751)
T ss_dssp EEEEEEECTTTT-CEEEEEEESSSSSCEEEEEEETTCTTCCC-------------CCCE----EEECSCCEECSSTTEEE
T ss_pred EEeeeEecCCCC-CEEEEEEeCCCCceEEEEEEECCCCCEeC-------------Cccc----cCceeeEEEecCCCEEE
Confidence 67889999 999 6666543 333 4999999987 521 0001 11134688999998554
Q ss_pred E-ecC-----CcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEecc---CCeEEEE
Q 021160 109 S-YND-----ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSD---CGHLFIW 179 (316)
Q Consensus 109 s-~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~---dg~v~~w 179 (316)
. ..+ ..|+++++.++.. .....+..... .....+.| +|+|++|+..+. ...|+++
T Consensus 237 y~~~d~~~~~~~v~~~~lgt~~~--------------~~~lv~~~~~~-~~~~~~~~-SpDg~~l~~~~~~~~~~~l~~~ 300 (751)
T 2xe4_A 237 YVTKDETLRENKVWRHVMGKLQS--------------EDVCLYEEHNP-LFSAFMYK-AADTNTLCIGSQSPETAEVHLL 300 (751)
T ss_dssp EEEECTTCCEEEEEEEETTSCGG--------------GCEEEEECCCT-TCEEEEEE-CTTSSEEEEEEECSSCEEEEEE
T ss_pred EEEECCCCCCCEEEEEECCCCch--------------hcEEEEecCCC-ceEEEEEE-CCCCCEEEEEecCCCCceEEEE
Confidence 4 433 2578888766510 01122322211 22567788 999998887653 4468889
Q ss_pred eccCC--ee-EEEe-ecCccceEEEEEcCCCCeEEEEeCC----CcEEEecCCC-CCCCC-CCCCccc--ceeeeecCCC
Q 021160 180 KKKGG--KL-VRLM-VGDRHVVNQLEPHPHIPMFATCGIE----KTVKLWAPMP-TDFPP-LPDNAEK--IMKANKQGRE 247 (316)
Q Consensus 180 d~~~~--~~-~~~~-~~~~~~v~~~~~~p~~~~l~s~~~d----~~i~iwd~~~-~~~~~-~~~~~~~--~~~~~~~~~~ 247 (316)
|+.++ +. +..+ ........++.|+..+.+++....+ ..|..+++.+ ..... +..+... +.... + ..
T Consensus 301 d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~-~-~~ 378 (751)
T 2xe4_A 301 DLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIA-V-RS 378 (751)
T ss_dssp ESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEE-E-CS
T ss_pred ECCCCCCCceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEE-E-EC
Confidence 98865 22 1333 3334455666655444444444443 2566667664 33333 3223222 11222 1 24
Q ss_pred CceeEEecCCCeEEEEEe
Q 021160 248 DHSRITLTPDVIMHVLRL 265 (316)
Q Consensus 248 ~~~~~s~~~d~~~~~w~~ 265 (316)
+.++++...++..+++-+
T Consensus 379 ~~lv~~~~~~g~~~l~~~ 396 (751)
T 2xe4_A 379 NYLVVAGRRAGLTRIWTM 396 (751)
T ss_dssp SEEEEEEEETTEEEEEEE
T ss_pred CEEEEEEEeCCEEEEEEE
Confidence 556677777776665543
No 248
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.46 E-value=0.00014 Score=59.48 Aligned_cols=221 Identities=9% Similarity=-0.056 Sum_probs=127.1
Q ss_pred eeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceec
Q 021160 3 LFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTF 82 (316)
Q Consensus 3 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~ 82 (316)
..|+.+|+........+.... .....+++|++.+..++.+-...+.|..+++.....
T Consensus 13 ~~I~~i~l~~~~~~~~~~~~~----------~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~------------- 69 (318)
T 3sov_A 13 RDLRLVDATNGKENATIVVGG----------LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTES------------- 69 (318)
T ss_dssp EEEEEEETTCTTSCCEEEEEE----------EEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSC-------------
T ss_pred CeEEEEECCCCceEEEEEecC----------CCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCc-------------
Confidence 457777776653222222221 124678999986646666666778899998875531
Q ss_pred ccccccCCCcccEEEEEEccCC-CeEEE-ecCCcEEEEEcCCCCCCCCccCCccccccCCCcceee-CCcCCceeeeEEE
Q 021160 83 CPRHLIGKNNIHITGLAYSNTS-ELLIS-YNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYS-GHRNSQTVKGVNF 159 (316)
Q Consensus 83 ~~~~~~~~~~~~i~~~~~~~~~-~~l~s-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~ 159 (316)
...+....-.....+++.+.+ +++++ ...+.|.+++++.. ....+. .... ....+++
T Consensus 70 -~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~-----------------~~~~l~~~~~~--~P~giav 129 (318)
T 3sov_A 70 -VQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGS-----------------LRKVLFWQELD--QPRAIAL 129 (318)
T ss_dssp -CCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSC-----------------SCEEEECSSCS--SEEEEEE
T ss_pred -eEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCC-----------------cEEEEEeCCCC--CccEEEE
Confidence 000001111235578888754 45555 46788999998764 222332 2222 2788888
Q ss_pred ecCCCcEEEEec--cCCeEEEEeccCCeeEEEe-ecCccceEEEEEcCCCCeE-EEEeCCCcEEEecCCCCCCCCCCC-C
Q 021160 160 FGPNDEYVMSGS--DCGHLFIWKKKGGKLVRLM-VGDRHVVNQLEPHPHIPMF-ATCGIEKTVKLWAPMPTDFPPLPD-N 234 (316)
Q Consensus 160 ~~~~~~~l~~~~--~dg~v~~wd~~~~~~~~~~-~~~~~~v~~~~~~p~~~~l-~s~~~d~~i~iwd~~~~~~~~~~~-~ 234 (316)
.|.+.+|+... ..+.|...++.. +....+ ...-...+.++++|++..| ++-+..+.|..+++.......+.. .
T Consensus 130 -dp~~g~ly~td~~~~~~I~r~~~dG-~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~ 207 (318)
T 3sov_A 130 -DPSSGFMYWTDWGEVPKIERAGMDG-SSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGS 207 (318)
T ss_dssp -EGGGTEEEEEECSSSCEEEEEETTS-CSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSC
T ss_pred -eCCCCEEEEEecCCCCEEEEEEcCC-CCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCC
Confidence 77655555544 357888888763 333333 2223456899999966654 454567789999987644322211 1
Q ss_pred cccceeeeecCCCCceeEEecCCCeEEEEEecccCc
Q 021160 235 AEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQT 270 (316)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~~ 270 (316)
......++. .++.++.+-...+.|..++..+++.
T Consensus 208 ~~~P~glav--~~~~lywtd~~~~~V~~~~~~~G~~ 241 (318)
T 3sov_A 208 LPHPFALTL--FEDILYWTDWSTHSILACNKYTGEG 241 (318)
T ss_dssp CSCEEEEEE--ETTEEEEEETTTTEEEEEETTTCCS
T ss_pred CCCceEEEE--eCCEEEEEecCCCeEEEEECCCCCc
Confidence 111222221 1345666766778788777655543
No 249
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.45 E-value=8.3e-06 Score=67.97 Aligned_cols=102 Identities=6% Similarity=-0.206 Sum_probs=66.1
Q ss_pred cEEEEEecCC----cEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEec-----------C
Q 021160 48 NYFAVGGSDE----YARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYN-----------D 112 (316)
Q Consensus 48 ~~l~~g~~dg----~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~-----------d 112 (316)
..+++...++ .|.++|..+++. ...+..+. .+ .+.++|+++.+..++ +
T Consensus 33 ~~yV~~~~~~~~~d~vsvID~~t~~v--------------~~~i~vG~-~P--~i~~spDg~~lyVan~~~~r~~~G~~~ 95 (368)
T 1mda_H 33 RSHITLPAYFAGTTENWVSCAGCGVT--------------LGHSLGAF-LS--LAVAGHSGSDFALASTSFARSAKGKRT 95 (368)
T ss_dssp EEEEEECTTTCSSEEEEEEETTTTEE--------------EEEEEECT-TC--EEEECTTSSCEEEEEEEETTTTSSSEE
T ss_pred eEEEECCccCCccceEEEEECCCCeE--------------EEEEeCCC-CC--ceEECCCCCEEEEEcccccccccCCCC
Confidence 3444444444 788999999873 22332232 34 699999998554432 6
Q ss_pred CcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcC-----CceeeeEEEecCCCcEEEEecc--CCeEEE--EeccC
Q 021160 113 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRN-----SQTVKGVNFFGPNDEYVMSGSD--CGHLFI--WKKKG 183 (316)
Q Consensus 113 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~~l~~~~~--dg~v~~--wd~~~ 183 (316)
+.|.+||+.+. +....+..... ......+++ +|+|++++++.. ...+.+ +|+.+
T Consensus 96 ~~VsviD~~T~----------------~vv~~I~v~~~~~~~~g~~P~~ia~-SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 96 DYVEVFDPVTF----------------LPIADIELPDAPRFSVGPRVHIIGN-CASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp EEEEEECTTTC----------------CEEEEEEETTSCSCCBSCCTTSEEE-CTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred CEEEEEECCCC----------------CEEEEEECCCccccccCCCcceEEE-cCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 78999999988 56666643200 011456777 899988888764 456777 77643
No 250
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.41 E-value=6.2e-05 Score=61.67 Aligned_cols=170 Identities=12% Similarity=0.059 Sum_probs=101.0
Q ss_pred ceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCcee--cccc---cccCCCcccEEEEEEcc-CCCeEEE
Q 021160 36 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT--FCPR---HLIGKNNIHITGLAYSN-TSELLIS 109 (316)
Q Consensus 36 ~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~i~~~~~~~-~~~~l~s 109 (316)
...++++++++ +++.++..++.|..|+..+++..... ....... .+.. ............+++.+ +++++++
T Consensus 20 ~p~~i~~d~~g-~~l~v~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 97 (322)
T 2fp8_A 20 APNSFTFDSTN-KGFYTSVQDGRVIKYEGPNSGFVDFA-YASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIV 97 (322)
T ss_dssp CCCCEECCTTC-SSEEEECTTSEEEEECCTTTCEEEEE-ESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEE
T ss_pred CceEEEEcCCC-CEEEEEcCCCeEEEECCCCCceEEEe-cccccccccccccccchhccccCCCCceEEEcCCCCcEEEE
Confidence 34678999988 77788888899999998765421000 0000000 0000 00000123478899997 7777777
Q ss_pred ecCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCc---CCceeeeEEEecC-CCcEEEEecc-------------
Q 021160 110 YNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHR---NSQTVKGVNFFGP-NDEYVMSGSD------------- 172 (316)
Q Consensus 110 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~-~~~~l~~~~~------------- 172 (316)
...+.|..+|..++ ....+.... .......+++ .+ +|.+.++-..
T Consensus 98 d~~~~i~~~d~~~g-----------------~~~~~~~~~~~~~~~~p~~i~~-d~~~G~l~v~d~~~~~~~~~~~~~~~ 159 (322)
T 2fp8_A 98 DCYYHLSVVGSEGG-----------------HATQLATSVDGVPFKWLYAVTV-DQRTGIVYFTDVSTLYDDRGVQQIMD 159 (322)
T ss_dssp ETTTEEEEECTTCE-----------------ECEEEESEETTEECSCEEEEEE-CTTTCCEEEEESCSSCCTTCHHHHHH
T ss_pred ECCCCEEEEeCCCC-----------------EEEEecccCCCCcccccceEEE-ecCCCEEEEECCcccccccccceehc
Confidence 55555888887654 122222111 0112678888 88 8877666432
Q ss_pred ----CCeEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEE-EEeCCCcEEEecCCCC
Q 021160 173 ----CGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFA-TCGIEKTVKLWAPMPT 226 (316)
Q Consensus 173 ----dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~-s~~~d~~i~iwd~~~~ 226 (316)
++.|..+|..+++....... -.....++++|+++.|. +-...+.|.+|++...
T Consensus 160 ~~~~~g~v~~~d~~~~~~~~~~~~-~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~ 217 (322)
T 2fp8_A 160 TSDKTGRLIKYDPSTKETTLLLKE-LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGP 217 (322)
T ss_dssp HTCCCEEEEEEETTTTEEEEEEEE-ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSST
T ss_pred ccCCCceEEEEeCCCCEEEEeccC-CccCcceEECCCCCEEEEEeCCCCeEEEEECCCC
Confidence 36789999877765333222 23456799999998654 4456688999998754
No 251
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.41 E-value=3.1e-05 Score=59.98 Aligned_cols=164 Identities=12% Similarity=0.022 Sum_probs=103.9
Q ss_pred eeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceec
Q 021160 3 LFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTF 82 (316)
Q Consensus 3 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~ 82 (316)
..|+++|+.+.+....+...... ---.+++. +..++...-.++.+.+||..+.+...+ +
T Consensus 43 S~v~~vD~~tgkv~~~~~l~~~~----------fgeGi~~~--~~~ly~ltw~~~~v~v~D~~tl~~~~t---------i 101 (243)
T 3mbr_X 43 SSVRKVDLETGRILQRAEVPPPY----------FGAGIVAW--RDRLIQLTWRNHEGFVYDLATLTPRAR---------F 101 (243)
T ss_dssp CEEEEEETTTCCEEEEEECCTTC----------CEEEEEEE--TTEEEEEESSSSEEEEEETTTTEEEEE---------E
T ss_pred ceEEEEECCCCCEEEEEeCCCCc----------ceeEEEEe--CCEEEEEEeeCCEEEEEECCcCcEEEE---------E
Confidence 37899999888776665543111 11233443 335666667889999999998874321 1
Q ss_pred ccccccCCCcccEEEEEEccCCC-eEEEecCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCc---eeeeEE
Q 021160 83 CPRHLIGKNNIHITGLAYSNTSE-LLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQ---TVKGVN 158 (316)
Q Consensus 83 ~~~~~~~~~~~~i~~~~~~~~~~-~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~i~~~~ 158 (316)
. ....+ ..++ +++. ++++-.++.|.++|..+. +....+.....+. .++.+.
T Consensus 102 ~-----~~~~G--wglt--~dg~~L~vSdgs~~l~~iDp~t~----------------~~~~~I~V~~~g~~~~~lNeLe 156 (243)
T 3mbr_X 102 R-----YPGEG--WALT--SDDSHLYMSDGTAVIRKLDPDTL----------------QQVGSIKVTAGGRPLDNLNELE 156 (243)
T ss_dssp E-----CSSCC--CEEE--ECSSCEEEECSSSEEEEECTTTC----------------CEEEEEECEETTEECCCEEEEE
T ss_pred e-----CCCCc--eEEe--eCCCEEEEECCCCeEEEEeCCCC----------------eEEEEEEEccCCcccccceeeE
Confidence 1 11111 2333 4565 555545888999999887 5555555432211 255667
Q ss_pred EecCCCcEEEEeccCCeEEEEeccCCeeEEEeecC-------------ccceEEEEEcCCCCeEEEEeC
Q 021160 159 FFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGD-------------RHVVNQLEPHPHIPMFATCGI 214 (316)
Q Consensus 159 ~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~-------------~~~v~~~~~~p~~~~l~s~~~ 214 (316)
+ . +|...+..-.+..|.+.|.++++.+..+... ....+.+|++|+++.|...+.
T Consensus 157 ~-~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 157 W-V-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp E-E-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred E-e-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 6 3 6666655556889999999999998887522 135688999998877655553
No 252
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.37 E-value=3.1e-05 Score=67.73 Aligned_cols=186 Identities=9% Similarity=0.002 Sum_probs=117.0
Q ss_pred CCCCcEEEEE-ecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEE-c-cCCCeEEEec---------
Q 021160 44 PRNPNYFAVG-GSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAY-S-NTSELLISYN--------- 111 (316)
Q Consensus 44 ~~~~~~l~~g-~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~-~~~~~l~s~~--------- 111 (316)
++| +++.+. ..+..|.+.|+.+.++... ..+.. ......+++ . |+++++..+.
T Consensus 99 ~DG-~~lfVnd~~~~rVavIdl~t~~~~~i------------i~ip~--g~~phg~~~~~~p~~~~v~~~~~~~~p~~~d 163 (595)
T 1fwx_A 99 YDG-RFLFMNDKANTRVARVRCDVMKCDAI------------LEIPN--AKGIHGLRPQKWPRSNYVFCNGEDETPLVND 163 (595)
T ss_dssp EEE-EEEEEEETTTTEEEEEETTTTEEEEE------------EECSS--CCSEEEEEECCSSBCSEEEEEECSCEESSCS
T ss_pred cCC-CEEEEEcCCCCEEEEEECCCceEeeE------------EeCCC--CCCCcceeeeecCCCcEEEEecccccccCCC
Confidence 377 555554 4567799999999873321 02211 234667777 4 7887655541
Q ss_pred ----------CCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEeccCC-------
Q 021160 112 ----------DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCG------- 174 (316)
Q Consensus 112 ----------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg------- 174 (316)
++.+.+.|..+. +....+....+ ...+++ +|+|+++++.+.+.
T Consensus 164 g~~l~~~~~~~~~vtvID~~t~----------------~v~~qI~Vgg~---pd~~~~-spdGk~~~vt~~~se~~~~i~ 223 (595)
T 1fwx_A 164 GTNMEDVANYVNVFTAVDADKW----------------EVAWQVLVSGN---LDNCDA-DYEGKWAFSTSYNSEKGMTLP 223 (595)
T ss_dssp SSSTTCGGGEEEEEEEEETTTT----------------EEEEEEEESSC---CCCEEE-CSSSSEEEEEESCTTCCSSHH
T ss_pred CcccccccccCceEEEEECCCC----------------eEEEEEEeCCC---ccceEE-CCCCCEEEEEecCcccCcchh
Confidence 446888888776 45544442222 345666 88888888877543
Q ss_pred -------------------------------eEEEEeccC--Cee-EEEeecCccceEEEEEcCCCCeEE-EEeCCCcEE
Q 021160 175 -------------------------------HLFIWKKKG--GKL-VRLMVGDRHVVNQLEPHPHIPMFA-TCGIEKTVK 219 (316)
Q Consensus 175 -------------------------------~v~~wd~~~--~~~-~~~~~~~~~~v~~~~~~p~~~~l~-s~~~d~~i~ 219 (316)
.|.+.|..+ ++. +..++.. ....++.++|||++++ ++..+.+|.
T Consensus 224 ~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg-~~PhGv~~sPDGk~v~V~~~~s~~Vs 302 (595)
T 1fwx_A 224 EMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIA-NNPHGCNMAPDKKHLCVAGKLSPTVT 302 (595)
T ss_dssp HHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEE-SSCCCEEECTTSSEEEEECTTSSBEE
T ss_pred hccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecC-CCceEEEEcCCCCEEEEeCCCCCeEE
Confidence 366666665 444 4444432 2456799999999855 555788999
Q ss_pred EecCCCCC-------------CCCCCCCcccceeeeecCCCCceeEEecCCCeEEEEEecc
Q 021160 220 LWAPMPTD-------------FPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQR 267 (316)
Q Consensus 220 iwd~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~ 267 (316)
++|+.+.+ ..++... ....-.+ +++++...++.--|+.+.+|++..
T Consensus 303 Vid~~~~~~~~~~~l~~~~~v~~~v~vG-~gP~h~a-F~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 303 VLDVTRFDAVFYENADPRSAVVAEPELG-LGPLHTA-FDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp EEEGGGHHHHHHSCCCGGGGEEECCBCC-SCEEEEE-ECTTSEEEEEETTTTEEEEEEHHH
T ss_pred EEECcccccccccccCcccceEEEcCCC-CCcceEE-ECCCCeEEEEEecCCcEEEEEhhH
Confidence 99998542 1122111 1222333 677777777888899999999887
No 253
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.37 E-value=0.00041 Score=54.41 Aligned_cols=168 Identities=8% Similarity=0.048 Sum_probs=103.4
Q ss_pred ccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEe-cC
Q 021160 34 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-ND 112 (316)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d 112 (316)
...+..++|+|++..++++...++.|...|.. ++.. ..+...-......+++.+++.++++. .+
T Consensus 26 ~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~--------------~~i~l~g~~D~EGIa~~~~g~~~vs~E~~ 90 (255)
T 3qqz_A 26 TNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLI--------------RTIPLDFVKDLETIEYIGDNQFVISDERD 90 (255)
T ss_dssp CSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEE--------------EEEECSSCSSEEEEEECSTTEEEEEETTT
T ss_pred ccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEE--------------EEEecCCCCChHHeEEeCCCEEEEEECCC
Confidence 45799999999874677778888999999987 6532 11111112457788998888876775 57
Q ss_pred CcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEeccCCeEEEEecc---CCeeEEE
Q 021160 113 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKK---GGKLVRL 189 (316)
Q Consensus 113 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~---~~~~~~~ 189 (316)
+.+.++++..... ...+..... .+...........++| +|.++.|.++.+.....+|.+. ....+..
T Consensus 91 ~~l~~~~v~~~~~-------i~~~~~~~~--~~~~~~~N~g~EGLA~-d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i 160 (255)
T 3qqz_A 91 YAIYVISLTPNSE-------VKILKKIKI--PLQESPTNCGFEGLAY-SRQDHTFWFFKEKNPIEVYKVNGLLSSNELHI 160 (255)
T ss_dssp TEEEEEEECTTCC-------EEEEEEEEC--CCSSCCCSSCCEEEEE-ETTTTEEEEEEESSSEEEEEEESTTCSSCCEE
T ss_pred CcEEEEEcCCCCe-------eeeeeeecc--ccccccccCCcceEEE-eCCCCEEEEEECcCCceEEEEcccccCCceee
Confidence 8899998865410 000000000 0100111123789999 8888777777766555555554 1112222
Q ss_pred ee-------cCccceEEEEEcCCCCe-EEEEeCCCcEEEecCCCC
Q 021160 190 MV-------GDRHVVNQLEPHPHIPM-FATCGIEKTVKLWAPMPT 226 (316)
Q Consensus 190 ~~-------~~~~~v~~~~~~p~~~~-l~s~~~d~~i~iwd~~~~ 226 (316)
+. .+...+..++++|.... ++.....+.+.++|....
T Consensus 161 ~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~ 205 (255)
T 3qqz_A 161 SKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGE 205 (255)
T ss_dssp EECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCC
T ss_pred ecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCC
Confidence 21 12345788999997655 556667778889998765
No 254
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.35 E-value=0.00039 Score=57.67 Aligned_cols=196 Identities=8% Similarity=-0.070 Sum_probs=115.1
Q ss_pred ceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCC-CeEEE-ecCC
Q 021160 36 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTS-ELLIS-YNDE 113 (316)
Q Consensus 36 ~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~s-~~d~ 113 (316)
...+++|++.+..++.+-...+.|..+++..... ..+..........+++.+.+ +++++ ...+
T Consensus 74 ~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~---------------~~~~~~~~~~p~glavd~~~g~ly~~d~~~~ 138 (349)
T 3v64_C 74 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNV---------------EEVVSTGLESPGGLAVDWVHDKLYWTDSGTS 138 (349)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC---------------EEEECSSCSCCCEEEEETTTTEEEEEETTTT
T ss_pred ceEEEEEeccccEEEEEeccCCceEEEecCCCCc---------------eEEEeCCCCCccEEEEecCCCeEEEEcCCCC
Confidence 4678999986645666666778898898875531 01111112334678888755 45555 3578
Q ss_pred cEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEE-EeccC-CeEEEEeccCCeeEEEe-
Q 021160 114 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVM-SGSDC-GHLFIWKKKGGKLVRLM- 190 (316)
Q Consensus 114 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~-~~~~d-g~v~~wd~~~~~~~~~~- 190 (316)
.|.+.+++.. .....+..... ....+++ .|.+..|+ +-... +.|..+++... ....+
T Consensus 139 ~I~~~~~dG~----------------~~~~l~~~~l~--~P~~iav-dp~~g~ly~td~~~~~~I~r~~~dG~-~~~~~~ 198 (349)
T 3v64_C 139 RIEVANLDGA----------------HRKVLLWQSLE--KPRAIAL-HPMEGTIYWTDWGNTPRIEASSMDGS-GRRIIA 198 (349)
T ss_dssp EEEEEETTSC----------------SCEEEECTTCS--CEEEEEE-ETTTTEEEEEECSSSCEEEEEETTSC-SCEESC
T ss_pred eEEEEcCCCC----------------ceEEEEeCCCC--CcceEEE-ecCcCeEEEeccCCCCEEEEEeCCCC-CcEEEE
Confidence 8999998764 22222222222 2788888 77555444 44444 78888888643 33333
Q ss_pred ecCccceEEEEEcCCCCeE-EEEeCCCcEEEecCCCCCCCCC-CCCcccceeeeecCCCCceeEEecCCCeEEEEEeccc
Q 021160 191 VGDRHVVNQLEPHPHIPMF-ATCGIEKTVKLWAPMPTDFPPL-PDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR 268 (316)
Q Consensus 191 ~~~~~~v~~~~~~p~~~~l-~s~~~d~~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~ 268 (316)
...-...+.++++|++..| ++-...+.|..+++.......+ .........++. .++.++++-...+.|...+..++
T Consensus 199 ~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav--~~~~ly~td~~~~~V~~~~~~~G 276 (349)
T 3v64_C 199 DTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV--FEDSLYWTDWHTKSINSANKFTG 276 (349)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEE--ETTEEEEEETTTTEEEEEETTTC
T ss_pred ECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEE--ECCEEEEecCCCCeEEEEEccCC
Confidence 2223457899999876664 4445667899999876542221 111112222332 34566777777777777764344
No 255
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.35 E-value=0.00028 Score=59.35 Aligned_cols=197 Identities=7% Similarity=-0.103 Sum_probs=115.1
Q ss_pred ceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCC-eEEE-ecCC
Q 021160 36 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE-LLIS-YNDE 113 (316)
Q Consensus 36 ~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~s-~~d~ 113 (316)
....++|++.+..++.+-...+.|..+++...... .+..........+++.+.+. ++++ ...+
T Consensus 117 ~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~---------------~~~~~~~~~p~glavd~~~g~lY~~d~~~~ 181 (386)
T 3v65_B 117 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVE---------------EVVSTGLESPGGLAVDWVHDKLYWTDSGTS 181 (386)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEE---------------EEECSSCSCCCCEEEETTTTEEEEEETTTT
T ss_pred ccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcE---------------EEEeCCCCCccEEEEEeCCCeEEEEcCCCC
Confidence 47789999866456666667788999998755311 11011122345688887554 5555 3577
Q ss_pred cEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEe-ccC-CeEEEEeccCCeeEEEee
Q 021160 114 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSG-SDC-GHLFIWKKKGGKLVRLMV 191 (316)
Q Consensus 114 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~-~~d-g~v~~wd~~~~~~~~~~~ 191 (316)
.|.+.+++.. .....+...... ...+++ .|.+..|+.. ... +.|..+++..........
T Consensus 182 ~I~~~~~dg~----------------~~~~l~~~~l~~--P~giav-dp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~ 242 (386)
T 3v65_B 182 RIEVANLDGA----------------HRKVLLWQSLEK--PRAIAL-HPMEGTIYWTDWGNTPRIEASSMDGSGRRIIAD 242 (386)
T ss_dssp EEEECBTTSC----------------SCEEEECSSCSC--EEEEEE-ETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC
T ss_pred eEEEEeCCCC----------------ceEEeecCCCCC--CcEEEE-EcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEE
Confidence 8888887654 222222222222 788888 7766555444 334 788888887433332233
Q ss_pred cCccceEEEEEcCCCCeE-EEEeCCCcEEEecCCCCCCCCCC-CCcccceeeeecCCCCceeEEecCCCeEEEEEeccc
Q 021160 192 GDRHVVNQLEPHPHIPMF-ATCGIEKTVKLWAPMPTDFPPLP-DNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR 268 (316)
Q Consensus 192 ~~~~~v~~~~~~p~~~~l-~s~~~d~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~ 268 (316)
..-...+.|+|+|++..| ++-+..+.|..+++.......+. ........++. .++.++++-...+.|..++..++
T Consensus 243 ~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav--~~~~ly~td~~~~~V~~~~~~~G 319 (386)
T 3v65_B 243 THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV--FEDSLYWTDWHTKSINSANKFTG 319 (386)
T ss_dssp SSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE--ETTEEEEEETTTTEEEEEETTTC
T ss_pred CCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE--ECCEEEEeeCCCCeEEEEECCCC
Confidence 333457899999866654 45556678999998764422221 11112223332 34567777777777777774444
No 256
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.32 E-value=0.00011 Score=60.26 Aligned_cols=197 Identities=9% Similarity=0.067 Sum_probs=110.9
Q ss_pred ceEEEEECC-CCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEcc-CCCeEEEec--
Q 021160 36 RLNAIVIDP-RNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSN-TSELLISYN-- 111 (316)
Q Consensus 36 ~v~~~~~~~-~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~s~~-- 111 (316)
.+..+++.+ ++ ++++ +...+.|..+|..+++.. .+.. ............+++.+ +|+++++..
T Consensus 81 ~p~gi~~~~~~g-~l~v-~d~~~~i~~~d~~~g~~~----------~~~~-~~~~~~~~~p~~i~~d~~~G~l~v~d~~~ 147 (322)
T 2fp8_A 81 RTYDISYNLQNN-QLYI-VDCYYHLSVVGSEGGHAT----------QLAT-SVDGVPFKWLYAVTVDQRTGIVYFTDVST 147 (322)
T ss_dssp CEEEEEEETTTT-EEEE-EETTTEEEEECTTCEECE----------EEES-EETTEECSCEEEEEECTTTCCEEEEESCS
T ss_pred CCceEEEcCCCC-cEEE-EECCCCEEEEeCCCCEEE----------Eecc-cCCCCcccccceEEEecCCCEEEEECCcc
Confidence 478899998 55 4444 444455888887655311 1100 00001113467899999 998777632
Q ss_pred ----------------CCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEe-ccCC
Q 021160 112 ----------------DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSG-SDCG 174 (316)
Q Consensus 112 ----------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~-~~dg 174 (316)
++.|..||..++ .. ..+...... ...+++ ++++++|+.+ +..+
T Consensus 148 ~~~~~~~~~~~~~~~~~g~v~~~d~~~~----------------~~-~~~~~~~~~--p~gia~-~~dg~~lyv~d~~~~ 207 (322)
T 2fp8_A 148 LYDDRGVQQIMDTSDKTGRLIKYDPSTK----------------ET-TLLLKELHV--PGGAEV-SADSSFVLVAEFLSH 207 (322)
T ss_dssp SCCTTCHHHHHHHTCCCEEEEEEETTTT----------------EE-EEEEEEESC--CCEEEE-CTTSSEEEEEEGGGT
T ss_pred cccccccceehcccCCCceEEEEeCCCC----------------EE-EEeccCCcc--CcceEE-CCCCCEEEEEeCCCC
Confidence 266888887654 22 222211112 567888 8999866554 6678
Q ss_pred eEEEEeccCCe--eEEEeecCccceEEEEEcCCCCeEEEEeC----------CCcEEEecCCCCCCCCCCCC----cccc
Q 021160 175 HLFIWKKKGGK--LVRLMVGDRHVVNQLEPHPHIPMFATCGI----------EKTVKLWAPMPTDFPPLPDN----AEKI 238 (316)
Q Consensus 175 ~v~~wd~~~~~--~~~~~~~~~~~v~~~~~~p~~~~l~s~~~----------d~~i~iwd~~~~~~~~~~~~----~~~~ 238 (316)
.|..|++.... ....+....+ ...+++.++|++.++... .+.|..+|.....+..+... ...+
T Consensus 208 ~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~ 286 (322)
T 2fp8_A 208 QIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHF 286 (322)
T ss_dssp EEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTSCC
T ss_pred eEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCccccc
Confidence 99999987421 1112211223 778999999987666543 45678888754322222111 1112
Q ss_pred eeeeecCCCCceeEEecCCCeEEEEEeccc
Q 021160 239 MKANKQGREDHSRITLTPDVIMHVLRLQRR 268 (316)
Q Consensus 239 ~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~ 268 (316)
..+. . .++.+.++....+.|..+++..+
T Consensus 287 ~~~~-~-~~g~L~v~~~~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 287 EQIQ-E-HDGLLYIGTLFHGSVGILVYDKK 314 (322)
T ss_dssp CEEE-E-ETTEEEEECSSCSEEEEEEC---
T ss_pred eEEE-E-eCCEEEEeecCCCceEEEecccc
Confidence 2222 1 35666777767777787776544
No 257
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.32 E-value=2.1e-05 Score=71.16 Aligned_cols=224 Identities=8% Similarity=0.015 Sum_probs=117.7
Q ss_pred eeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEe-cCCcEEEEeCcCCcccCCCCCCCCceec
Q 021160 4 FNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGG-SDEYARVYDIRKCHWYSPISSDTPVDTF 82 (316)
Q Consensus 4 ~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~-~dg~v~~wd~~~~~~~~~~~~~~~~~~~ 82 (316)
.+.+||+.+++..++...... +.....++++.+++ .+++.|+ .+..+.+||..+.++....
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~~--------~~~~~~~~~~~~~g-~lyv~GG~~~~~v~~yd~~t~~W~~~~--------- 281 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVTK--------HDMFCPGISMDGNG-QIVVTGGNDAKKTSLYDSSSDSWIPGP--------- 281 (656)
T ss_dssp EEEEECTTTCCBCCCEEEECS--------CCCSSCEEEECTTS-CEEEECSSSTTCEEEEEGGGTEEEECC---------
T ss_pred EEEEEeCCCCcEEeCcccCCC--------CCCccccccCCCCC-CEEEeCCCCCCceEEecCcCCceeECC---------
Confidence 577888877765444332211 22234457778888 7888887 4568999999987754221
Q ss_pred ccccccCCCcccEEEEEEccCCCeEEEec--C-----CcEEEEEcCCCCCCCCccCCccccccCCCcceeeCC---cCCc
Q 021160 83 CPRHLIGKNNIHITGLAYSNTSELLISYN--D-----ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGH---RNSQ 152 (316)
Q Consensus 83 ~~~~~~~~~~~~i~~~~~~~~~~~l~s~~--d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 152 (316)
.+.. ...-.+++..+++++++.+. + ..+.+||..+.. ...+... .-..
T Consensus 282 ---~~~~--~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~-----------------W~~~~~~~~~p~~~ 339 (656)
T 1k3i_A 282 ---DMQV--ARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT-----------------WTSLPNAKVNPMLT 339 (656)
T ss_dssp ---CCSS--CCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE-----------------EEEETTSCSGGGCC
T ss_pred ---CCCc--cccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCc-----------------ceeCCCcccccccc
Confidence 1101 11123455667888777643 3 468999987651 1111000 0000
Q ss_pred eeeeEEEecCCCcEEEEecc---------CCeEEEEeccCCeeEEEeecCcc---------ceEEEEEcC-CCCeEEEEe
Q 021160 153 TVKGVNFFGPNDEYVMSGSD---------CGHLFIWKKKGGKLVRLMVGDRH---------VVNQLEPHP-HIPMFATCG 213 (316)
Q Consensus 153 ~i~~~~~~~~~~~~l~~~~~---------dg~v~~wd~~~~~~~~~~~~~~~---------~v~~~~~~p-~~~~l~s~~ 213 (316)
.-....+ ..++..++.|+. ...+..||..+.........+.. .-.++.+.. ++++++.|+
T Consensus 340 ~~~~~~~-~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG 418 (656)
T 1k3i_A 340 ADKQGLY-RSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGG 418 (656)
T ss_dssp CCTTGGG-TTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECC
T ss_pred cccccee-ecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeC
Confidence 0000001 233333344433 34678888877654433322211 223444443 677788887
Q ss_pred CCC-----------cEEEecCCCCCCCCCC---CCcccceeeeecCCCCceeEEecCC-----------CeEEEEEeccc
Q 021160 214 IEK-----------TVKLWAPMPTDFPPLP---DNAEKIMKANKQGREDHSRITLTPD-----------VIMHVLRLQRR 268 (316)
Q Consensus 214 ~d~-----------~i~iwd~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~s~~~d-----------~~~~~w~~~~~ 268 (316)
.++ .|.+||+.+.....+. -........+...+++.+++.++.+ ..+.+||..+.
T Consensus 419 ~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~ 498 (656)
T 1k3i_A 419 SPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQD 498 (656)
T ss_dssp BSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGT
T ss_pred CCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCC
Confidence 543 6888998876522111 1111222222244577888888754 46788887654
No 258
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.27 E-value=0.00061 Score=57.60 Aligned_cols=202 Identities=7% Similarity=-0.027 Sum_probs=116.7
Q ss_pred cceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCC-CeEEE-ecC
Q 021160 35 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTS-ELLIS-YND 112 (316)
Q Consensus 35 ~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~s-~~d 112 (316)
..+.+++|++.+..++.+-...+.|+.+++...... . ....+..........+++.+.+ +++++ ...
T Consensus 112 ~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~------~-----~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~ 180 (400)
T 3p5b_L 112 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV------S-----SYDTVISRDIQAPDGLAVDWIHSNIYWTDSVL 180 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEEC------------C-----CCEEEECSSCSCEEEEEEETTTTEEEEEETTT
T ss_pred CcceEEeeeeccCceEEEecCCCeEEEEEcccCCCC------C-----cceEEEeCCCCCcccEEEEecCCceEEEECCC
Confidence 467899999876456666567788888888642100 0 0111112223456788998744 45555 457
Q ss_pred CcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEec--cCCeEEEEeccCCeeEEEe
Q 021160 113 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGS--DCGHLFIWKKKGGKLVRLM 190 (316)
Q Consensus 113 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~--~dg~v~~wd~~~~~~~~~~ 190 (316)
+.|.+.+++.. .....+..... ....+++ .|.+.+|+... ..+.|...++........+
T Consensus 181 ~~I~~~~~~g~----------------~~~~l~~~~~~--~P~~iav-dp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~ 241 (400)
T 3p5b_L 181 GTVSVADTKGV----------------KRKTLFRENGS--KPRAIVV-DPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV 241 (400)
T ss_dssp TEEEEECTTTC----------------SEEEEEECSSC--CEEEEEE-ETTTTEEEEEECSSSCCEEEEETTSCSCEEEE
T ss_pred CeEEEEeCCCC----------------ceEEEEeCCCC--CcceEEE-ecccCeEEEEeCCCCCEEEEEeCCCCccEEEE
Confidence 88999988765 22222332222 2788998 77655555543 2477888888743333333
Q ss_pred ecCccceEEEEEcCCCCeEEEE-eCCCcEEEecCCCCCCCCCCC---CcccceeeeecCCCCceeEEecCCCeEEEEEec
Q 021160 191 VGDRHVVNQLEPHPHIPMFATC-GIEKTVKLWAPMPTDFPPLPD---NAEKIMKANKQGREDHSRITLTPDVIMHVLRLQ 266 (316)
Q Consensus 191 ~~~~~~v~~~~~~p~~~~l~s~-~~d~~i~iwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~ 266 (316)
...-...+.|+++|++..|..+ ...+.|..+|+.......+.. .......++. .++.++.+-...+.|..++..
T Consensus 242 ~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v--~~~~lywtd~~~~~V~~~~~~ 319 (400)
T 3p5b_L 242 TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV--FEDKVFWTDIINEAIFSANRL 319 (400)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEE--ETTEEEEEESSSCSEEEEESS
T ss_pred ECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEE--eCCEEEEecCCCCeEEEEEcC
Confidence 3333567899999877765544 456789999987654332211 1111222221 244566666666777777744
Q ss_pred cc
Q 021160 267 RR 268 (316)
Q Consensus 267 ~~ 268 (316)
++
T Consensus 320 ~G 321 (400)
T 3p5b_L 320 TG 321 (400)
T ss_dssp SC
T ss_pred CC
Confidence 44
No 259
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.24 E-value=0.00065 Score=55.12 Aligned_cols=223 Identities=11% Similarity=0.016 Sum_probs=123.8
Q ss_pred ceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEe-c-CC
Q 021160 36 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-N-DE 113 (316)
Q Consensus 36 ~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~-d~ 113 (316)
....++|++++ +++++-..++.|..||...... .... .......+++.++|+++++. . ++
T Consensus 33 ~pegia~~~~g-~lyv~d~~~~~I~~~d~~g~~~-------------~~~~----~~~~p~gia~~~dG~l~vad~~~~~ 94 (306)
T 2p4o_A 33 FLENLASAPDG-TIFVTNHEVGEIVSITPDGNQQ-------------IHAT----VEGKVSGLAFTSNGDLVATGWNADS 94 (306)
T ss_dssp CEEEEEECTTS-CEEEEETTTTEEEEECTTCCEE-------------EEEE----CSSEEEEEEECTTSCEEEEEECTTS
T ss_pred CcceEEECCCC-CEEEEeCCCCeEEEECCCCceE-------------EEEe----CCCCceeEEEcCCCcEEEEeccCCc
Confidence 46789999988 6777766789999998764321 0001 12357889999999977774 3 22
Q ss_pred -cEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCee-EEEee
Q 021160 114 -LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKL-VRLMV 191 (316)
Q Consensus 114 -~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~-~~~~~ 191 (316)
.|..+|..++ +. ..+...........++. .+++..+++-..++.|+.+|..+++. +....
T Consensus 95 ~~v~~~d~~~g----------------~~-~~~~~~~~~~~~~g~~~-~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~ 156 (306)
T 2p4o_A 95 IPVVSLVKSDG----------------TV-ETLLTLPDAIFLNGITP-LSDTQYLTADSYRGAIWLIDVVQPSGSIWLEH 156 (306)
T ss_dssp CEEEEEECTTS----------------CE-EEEEECTTCSCEEEEEE-SSSSEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred ceEEEEcCCCC----------------eE-EEEEeCCCccccCcccc-cCCCcEEEEECCCCeEEEEeCCCCcEeEEEEC
Confidence 4777776665 22 22221111112345554 45555555555688999999876532 21111
Q ss_pred ---------cCccceEEEEEcCCCCeE-EEEeCCCcEEEecCCC-CCCCCCCCC--cccceeeeecCCCCceeEEecCCC
Q 021160 192 ---------GDRHVVNQLEPHPHIPMF-ATCGIEKTVKLWAPMP-TDFPPLPDN--AEKIMKANKQGREDHSRITLTPDV 258 (316)
Q Consensus 192 ---------~~~~~v~~~~~~p~~~~l-~s~~~d~~i~iwd~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~s~~~d~ 258 (316)
..-...+.+ +|+++.| ++-...+.|..+++.. +.+...... ......+ ...+++++.++....+
T Consensus 157 ~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi-~vd~dG~l~va~~~~~ 233 (306)
T 2p4o_A 157 PMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDF-AFDVEGNLYGATHIYN 233 (306)
T ss_dssp GGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSE-EEBTTCCEEEECBTTC
T ss_pred CccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCe-EECCCCCEEEEeCCCC
Confidence 011234455 7888764 5555678899999875 322111000 0011112 2445677777777778
Q ss_pred eEEEEEecccCcceeE--Eee-ccccccccc---CCCCeEEEEecc
Q 021160 259 IMHVLRLQRRQTLAYR--ERR-YNAADFESD---EEEGETYLLGFS 298 (316)
Q Consensus 259 ~~~~w~~~~~~~~~~~--~~~-~~~~~~~~~---~~~~~v~~~~~~ 298 (316)
.|.+++.. ++..... ... .....++.+ .+.+++|+....
T Consensus 234 ~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 234 SVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp CEEEECTT-CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred eEEEECCC-CCEEEEeecccccCCceEEEEecccCCCCEEEEECCC
Confidence 88888754 3221111 111 122334433 455779988875
No 260
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.22 E-value=3.1e-05 Score=70.15 Aligned_cols=107 Identities=12% Similarity=0.187 Sum_probs=66.8
Q ss_pred CCc---EEEEeccCCeEEEEeccCCeeEEEeecCc-----------c-c------------------------eEEEEEc
Q 021160 163 NDE---YVMSGSDCGHLFIWKKKGGKLVRLMVGDR-----------H-V------------------------VNQLEPH 203 (316)
Q Consensus 163 ~~~---~l~~~~~dg~v~~wd~~~~~~~~~~~~~~-----------~-~------------------------v~~~~~~ 203 (316)
+|+ .++.++.+|.++++|..+|+++...+... . + -..++++
T Consensus 310 ~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~d 389 (668)
T 1kv9_A 310 DGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFN 389 (668)
T ss_dssp TTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEE
T ss_pred CCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceEC
Confidence 554 68899999999999999999875443211 0 0 0125677
Q ss_pred CCCCeEEEE------------------------------------eCCCcEEEecCCCCCC-CCCCCCcccceeeeecCC
Q 021160 204 PHIPMFATC------------------------------------GIEKTVKLWAPMPTDF-PPLPDNAEKIMKANKQGR 246 (316)
Q Consensus 204 p~~~~l~s~------------------------------------~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~ 246 (316)
|+...+... ..++.|..||+.+++. -+.. ........ ....
T Consensus 390 p~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~-~~~~~~~~-~~~t 467 (668)
T 1kv9_A 390 PGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVP-YPTHWNGG-TLST 467 (668)
T ss_dssp TTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEE-ESSSCCCC-EEEE
T ss_pred CCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEcc-CCCCCcCc-eeEe
Confidence 766554331 1247788899888762 1111 11111111 1223
Q ss_pred CCceeEEecCCCeEEEEEecccCcc
Q 021160 247 EDHSRITLTPDVIMHVLRLQRRQTL 271 (316)
Q Consensus 247 ~~~~~~s~~~d~~~~~w~~~~~~~~ 271 (316)
.+.+++.++.|+.++.||..+++.+
T Consensus 468 ~gg~vf~g~~dg~l~a~d~~tG~~l 492 (668)
T 1kv9_A 468 AGNLVFQGTAAGQMHAYSADKGEAL 492 (668)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEE
T ss_pred CCCEEEEECCcccchhhhhhcChhh
Confidence 5668888899999999998887554
No 261
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.17 E-value=0.00071 Score=57.83 Aligned_cols=153 Identities=12% Similarity=0.136 Sum_probs=91.7
Q ss_pred ceEEEEECCC--CCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEecC-
Q 021160 36 RLNAIVIDPR--NPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYND- 112 (316)
Q Consensus 36 ~v~~~~~~~~--~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d- 112 (316)
....++|+|+ +..++++ ...+.|+.+|..++++. .+ .........++++++|+++++...
T Consensus 140 ~P~gvavd~~s~~g~Lyv~-D~~~~I~~id~~~g~v~---------------~~-~~~~~~P~giavd~dG~lyVad~~~ 202 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWV-GQRDAFRHVDFVNQYVD---------------IK-TTNIGQCADVNFTLNGDMVVVDDQS 202 (433)
T ss_dssp CCCEEEECTTTTTCEEEEE-CBTSCEEEEETTTTEEE---------------EE-CCCCSCEEEEEECTTCCEEEEECCS
T ss_pred CCceEEEccccCCCEEEEE-eCCCCEEEEECCCCEEE---------------Ee-ecCCCCccEEEECCCCCEEEEcCCC
Confidence 4568999985 3244444 33388999999777521 11 112345789999999996666432
Q ss_pred ---C-cEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecC-CCcEEEEeccCCeEEEEeccCCeeE
Q 021160 113 ---E-LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGP-NDEYVMSGSDCGHLFIWKKKGGKLV 187 (316)
Q Consensus 113 ---~-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~dg~v~~wd~~~~~~~ 187 (316)
. .+...+..... .....+. ... ....+++ ++ ++.+.++-..++.|+.++..++...
T Consensus 203 ~~~~~gv~~~~~~~~~---------------~~~~~~~-~~~--~P~giav-d~~~G~lyv~d~~~~~V~~~d~~~g~~~ 263 (433)
T 4hw6_A 203 SDTNTGIYLFTRASGF---------------TERLSLC-NAR--GAKTCAV-HPQNGKIYYTRYHHAMISSYDPATGTLT 263 (433)
T ss_dssp CTTSEEEEEECGGGTT---------------CCEEEEE-ECS--SBCCCEE-CTTTCCEEECBTTCSEEEEECTTTCCEE
T ss_pred CcccceEEEEECCCCe---------------ecccccc-ccC--CCCEEEE-eCCCCeEEEEECCCCEEEEEECCCCeEE
Confidence 1 23333332220 0001122 111 2566777 77 6766666667889999999877763
Q ss_pred EEe-ec-CccceEEEEEcCCCCe-EEEEeCCCcEEEecCC
Q 021160 188 RLM-VG-DRHVVNQLEPHPHIPM-FATCGIEKTVKLWAPM 224 (316)
Q Consensus 188 ~~~-~~-~~~~v~~~~~~p~~~~-l~s~~~d~~i~iwd~~ 224 (316)
..+ .. .......++|+|+++. +++-...+.|+.+++.
T Consensus 264 ~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 264 EEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp EEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred EEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 333 21 1223356999999985 5555567789987754
No 262
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.15 E-value=0.0012 Score=61.02 Aligned_cols=200 Identities=13% Similarity=0.133 Sum_probs=123.1
Q ss_pred ccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceeccccccc-CCCcccEEEEEEccCCCeEEEecC
Q 021160 34 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLI-GKNNIHITGLAYSNTSELLISYND 112 (316)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~s~~d 112 (316)
...|.++...++| .+-.|+.++.|..|+..+.... .+...... .-....|.++...++|.+.+++.+
T Consensus 309 ~~~i~~i~~D~~g--~lWigt~~~Gl~~~~~~~~~~~----------~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~ 376 (795)
T 4a2l_A 309 QRSVRSIFMDSQG--GMWLGTYFGGLNYYHPIRNRFK----------NIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTND 376 (795)
T ss_dssp SSCEEEEEECTTS--CEEEEESSSCEEEECGGGGSSE----------EECCCTTSSSCSCSSEEEEEECTTSCEEEEESS
T ss_pred CCcEEEEEEeCCc--CEEEEECCCCeEEeCCCcccce----------EEcCCCCCCCCCCCeeEEEEECCCCCEEEEECC
Confidence 4579999999987 3566777788999987655321 11000000 112456899999999998888777
Q ss_pred CcEEEEEcCCCCCCCCccCCccccccCCCcceeeCC-------cCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCe
Q 021160 113 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGH-------RNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGK 185 (316)
Q Consensus 113 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~ 185 (316)
+-|..|+..++ ....+... .....|.++.. .+++.+|..|+.++-+..+|..+++
T Consensus 377 ~Gl~~~~~~~~-----------------~~~~~~~~~~~~~~~l~~~~v~~i~~-d~~g~~lWigt~~~Gl~~~d~~~~~ 438 (795)
T 4a2l_A 377 GGLNLYNPITQ-----------------RFTSYTLQEDESARGIGSNNIKAVYV-DEKKSLVYIGTHAGGLSILHRNSGQ 438 (795)
T ss_dssp SCEEEECTTTC-----------------CEEEECCC------CCSCSCEEEEEE-ETTTTEEEEEETTTEEEEEETTTCC
T ss_pred CCeEEEcCCCC-----------------cEEEEecCCCCcccCCCCccEEEEEE-cCCCCEEEEEeCcCceeEEeCCCCc
Confidence 77999998764 12222110 01123888887 7788756777877889999998876
Q ss_pred eEEEee----cCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCCCCCCCC-------CcccceeeeecCCCCceeEEe
Q 021160 186 LVRLMV----GDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPD-------NAEKIMKANKQGREDHSRITL 254 (316)
Q Consensus 186 ~~~~~~----~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~s~ 254 (316)
...... .....|.++...+++.+.+... +-+.+|+..+++...+.. ....+..+. ...++.+.+..
T Consensus 439 ~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~--~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~-~d~~g~lWigt 515 (795)
T 4a2l_A 439 VENFNQRNSQLVNENVYAILPDGEGNLWLGTL--SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLF-RDSHKRLWIGG 515 (795)
T ss_dssp EEEECTTTSCCSCSCEEEEEECSSSCEEEEES--SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEE-ECTTCCEEEEE
T ss_pred EEEeecCCCCcCCCeeEEEEECCCCCEEEEec--CceeEEeCCCCeEEEccccccccccCCceEEEEE-ECCCCCEEEEe
Confidence 443321 1245789999888887655443 458889987765322221 112333333 44556555554
Q ss_pred cCCCeEEEEEeccc
Q 021160 255 TPDVIMHVLRLQRR 268 (316)
Q Consensus 255 ~~d~~~~~w~~~~~ 268 (316)
. .| +..++..++
T Consensus 516 ~-~G-l~~~~~~~~ 527 (795)
T 4a2l_A 516 E-EG-LSVFKQEGL 527 (795)
T ss_dssp S-SC-EEEEEEETT
T ss_pred C-Cc-eEEEeCCCC
Confidence 4 44 566766543
No 263
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.14 E-value=0.002 Score=52.14 Aligned_cols=160 Identities=10% Similarity=0.083 Sum_probs=103.5
Q ss_pred EEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceeccccccc--CCCcccEEEEEE---ccCCCeEEEec-
Q 021160 38 NAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLI--GKNNIHITGLAY---SNTSELLISYN- 111 (316)
Q Consensus 38 ~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~---~~~~~~l~s~~- 111 (316)
-+++|++....++++.-..+.|..|+...+... ......+. ......+..|.| .|++++++...
T Consensus 16 E~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~----------~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~ 85 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHF----------NVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKN 85 (334)
T ss_dssp SCEEEETTTTEEEEEETTTTEEEEECTTTCCEE----------EECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEE
T ss_pred cCccCcCCCCEEEEEeccCCEEEEEcCCCCeEE----------EEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcc
Confidence 478998866345555558999999998755311 01111110 011224579999 58887776532
Q ss_pred -------------CCcEEEEEcC---CCCCCCCccCCccccccCCCcceee--CCc---------CCceeeeEEEecCCC
Q 021160 112 -------------DELVYLFEKN---MGLGPSPLSLSPEDLQKREEPQVYS--GHR---------NSQTVKGVNFFGPND 164 (316)
Q Consensus 112 -------------d~~i~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---------~~~~i~~~~~~~~~~ 164 (316)
+..|..||+. ++ +.+.... ... .......++. .++|
T Consensus 86 ~~af~~~g~~~~g~~~v~~~Dl~~~~tg----------------~~~~~~dL~~~~~~~~~~~g~~~~~~nDvav-D~~G 148 (334)
T 2p9w_A 86 AKSFNFADQSSHGASSFHSFNLPLSENS----------------KPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQ-DRDG 148 (334)
T ss_dssp TTTTCTTSCCSSSCCEEEEEESSCCTTC----------------CCSEEEESHHHHHHHHHHHSSCCEEEEEEEE-CTTS
T ss_pred cccccccccccCCCCEEEEEcCCcCCCC----------------CEEEEecCccccccccccccccccCCceeEE-CCCC
Confidence 5779999998 55 3333322 110 1123778988 9999
Q ss_pred cEEEEeccC-CeEEEEeccCCeeEEEee-c-----CccceEEEEEcCCCCeEEEEeCCCcEEEecCCC
Q 021160 165 EYVMSGSDC-GHLFIWKKKGGKLVRLMV-G-----DRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMP 225 (316)
Q Consensus 165 ~~l~~~~~d-g~v~~wd~~~~~~~~~~~-~-----~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~ 225 (316)
+..++++.. +.|..++.... .+..+. . .....+.|+++|+++.|+.....+.+..+|+..
T Consensus 149 naYVt~s~~~~~I~rV~pdG~-~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 149 NSYVAFALGMPAIARVSADGK-TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp CEEEEEEESSCEEEEECTTSC-CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred CEEEeCCCCCCeEEEEeCCCC-EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 999999988 88888887743 333221 1 122367899999999877776699999999874
No 264
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.11 E-value=0.0026 Score=52.61 Aligned_cols=195 Identities=11% Similarity=0.010 Sum_probs=114.9
Q ss_pred ceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCC-eEEEe-cCC
Q 021160 36 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE-LLISY-NDE 113 (316)
Q Consensus 36 ~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~s~-~d~ 113 (316)
..+|.+..+.. +|+.+. ...|+..++..... ..+... ......++|.+... ++.+- ..+
T Consensus 35 ~~~C~~~~~~~--~ll~~~-~~~I~~i~~~g~~~---------------~~~~~~-~~~~~~l~~d~~~~~ly~~D~~~~ 95 (349)
T 3v64_C 35 RRSCKALGPEP--VLLFAN-RIDIRQVLPHRSEY---------------TLLLNN-LENAIALDFHHRRELVFWSDVTLD 95 (349)
T ss_dssp SSCEEESSSCC--EEEEEC-BSCEEEECTTSCCE---------------EEEECS-CSCEEEEEEETTTTEEEEEETTTT
T ss_pred CCcccccccCc--eeEeec-ccceEEEeCCCCee---------------EEeecC-CCceEEEEEeccccEEEEEeccCC
Confidence 34566666633 343333 35577778765431 111111 23478999997655 55553 688
Q ss_pred cEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCC-CcEEEEeccCCeEEEEeccCCeeEEEeec
Q 021160 114 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPN-DEYVMSGSDCGHLFIWKKKGGKLVRLMVG 192 (316)
Q Consensus 114 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~l~~~~~dg~v~~wd~~~~~~~~~~~~ 192 (316)
.|+.+++... .....+...... ...+++ .+. +.+.++-...+.|.+.++........+..
T Consensus 96 ~I~r~~~~g~----------------~~~~~~~~~~~~--p~glav-d~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~ 156 (349)
T 3v64_C 96 RILRANLNGS----------------NVEEVVSTGLES--PGGLAV-DWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQ 156 (349)
T ss_dssp EEEEEETTSC----------------SCEEEECSSCSC--CCEEEE-ETTTTEEEEEETTTTEEEEEETTSCSCEEEECT
T ss_pred ceEEEecCCC----------------CceEEEeCCCCC--ccEEEE-ecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeC
Confidence 8999998765 222222222222 567887 654 55556666678999999875443333333
Q ss_pred CccceEEEEEcCCCCe-EEEEeCC-CcEEEecCCCCCCCCCCC-CcccceeeeecC-CCCceeEEecCCCeEEEEEeccc
Q 021160 193 DRHVVNQLEPHPHIPM-FATCGIE-KTVKLWAPMPTDFPPLPD-NAEKIMKANKQG-REDHSRITLTPDVIMHVLRLQRR 268 (316)
Q Consensus 193 ~~~~v~~~~~~p~~~~-l~s~~~d-~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~s~~~d~~~~~w~~~~~ 268 (316)
.-.....++++|.+.. +.+-... +.|...++.......+.. .......++ +. .++.+.++-+..+.|..+++...
T Consensus 157 ~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla-~d~~~~~lY~aD~~~~~I~~~~~dG~ 235 (349)
T 3v64_C 157 SLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLT-IDYAGRRMYWVDAKHHVIERANLDGS 235 (349)
T ss_dssp TCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEE-EETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEE-EeCCCCEEEEEECCCCEEEEEeCCCC
Confidence 3356789999996655 4454444 788888887654333321 222233444 44 46677778777888888887654
Q ss_pred C
Q 021160 269 Q 269 (316)
Q Consensus 269 ~ 269 (316)
.
T Consensus 236 ~ 236 (349)
T 3v64_C 236 H 236 (349)
T ss_dssp S
T ss_pred c
Confidence 3
No 265
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.09 E-value=0.00026 Score=62.85 Aligned_cols=108 Identities=11% Similarity=-0.029 Sum_probs=68.3
Q ss_pred CCCc---EEEEeccCCeEEEEeccCCeeEEEeecCc-------------cce--------------------------EE
Q 021160 162 PNDE---YVMSGSDCGHLFIWKKKGGKLVRLMVGDR-------------HVV--------------------------NQ 199 (316)
Q Consensus 162 ~~~~---~l~~~~~dg~v~~wd~~~~~~~~~~~~~~-------------~~v--------------------------~~ 199 (316)
.+|+ .++.++.+|.++++|..+|+.+....... .++ ..
T Consensus 311 ~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~ 390 (571)
T 2ad6_A 311 VNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGV 390 (571)
T ss_dssp ETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCB
T ss_pred cCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCC
Confidence 4663 57788899999999999999877654211 011 23
Q ss_pred EEEcCCCCeEEEEe-------------------------------------CCCcEEEecCCCCCC-CCCCCCcccceee
Q 021160 200 LEPHPHIPMFATCG-------------------------------------IEKTVKLWAPMPTDF-PPLPDNAEKIMKA 241 (316)
Q Consensus 200 ~~~~p~~~~l~s~~-------------------------------------~d~~i~iwd~~~~~~-~~~~~~~~~~~~~ 241 (316)
++++|+...+...+ .++.|..||+.+++. -+.. ........
T Consensus 391 ~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~-~~~~~~~~ 469 (571)
T 2ad6_A 391 DSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKW-EKFAAWGG 469 (571)
T ss_dssp CEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEE-ESSCCCSB
T ss_pred ceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEec-CCCCccce
Confidence 57788776655443 347888999888762 2211 11111111
Q ss_pred eecCCCCceeEEecCCCeEEEEEecccCcc
Q 021160 242 NKQGREDHSRITLTPDVIMHVLRLQRRQTL 271 (316)
Q Consensus 242 ~~~~~~~~~~~s~~~d~~~~~w~~~~~~~~ 271 (316)
. ....+..++.++.|+.++.+|..+++.+
T Consensus 470 ~-~~t~gg~v~~g~~dg~l~a~D~~tG~~l 498 (571)
T 2ad6_A 470 T-LYTKGGLVWYATLDGYLKALDNKDGKEL 498 (571)
T ss_dssp C-EEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred e-EEECCCEEEEEcCCCeEEEEECCCCCEE
Confidence 1 1223456677899999999999888554
No 266
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.05 E-value=0.0047 Score=55.35 Aligned_cols=196 Identities=10% Similarity=-0.023 Sum_probs=118.4
Q ss_pred ceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCC-eEEE-ecCC
Q 021160 36 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE-LLIS-YNDE 113 (316)
Q Consensus 36 ~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~s-~~d~ 113 (316)
.+.+++|++.+..++.+-..++.|..+++..... . .+..........+++.+.+. ++++ ...+
T Consensus 38 ~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~----------~-----~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~ 102 (628)
T 4a0p_A 38 EASALDFDVTDNRIYWTDISLKTISRAFMNGSAL----------E-----HVVEFGLDYPEGMAVDWLGKNLYWADTGTN 102 (628)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC----------E-----EEECSSCSCCCEEEEETTTTEEEEEETTTT
T ss_pred ceEEEEEECCCCEEEEEECCCCeEEEEECCCCCc----------E-----EEEeCCCCCcceEEEEeCCCEEEEEECCCC
Confidence 5779999997746666666788899888875431 1 11111123456788887654 5555 3578
Q ss_pred cEEEEEcCCCCCCCCccCCccccccCCCcceee-CCcCCceeeeEEEecCCCcEEEEec--cCCeEEEEeccCCeeEEEe
Q 021160 114 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYS-GHRNSQTVKGVNFFGPNDEYVMSGS--DCGHLFIWKKKGGKLVRLM 190 (316)
Q Consensus 114 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~l~~~~--~dg~v~~wd~~~~~~~~~~ 190 (316)
.|.+.+++.. ....+. .... ....+++ .|...+|+... ..+.|...++.... ...+
T Consensus 103 ~I~v~~~dG~-----------------~~~~l~~~~l~--~P~~iav-dp~~G~lY~tD~g~~~~I~r~~~dG~~-~~~l 161 (628)
T 4a0p_A 103 RIEVSKLDGQ-----------------HRQVLVWKDLD--SPRALAL-DPAEGFMYWTEWGGKPKIDRAAMDGSE-RTTL 161 (628)
T ss_dssp EEEEEETTST-----------------TCEEEECSSCC--CEEEEEE-ETTTTEEEEEECSSSCEEEEEETTSCS-CEEE
T ss_pred EEEEEecCCC-----------------cEEEEEeCCCC--CcccEEE-ccCCCeEEEeCCCCCCEEEEEeCCCCc-eEEE
Confidence 8999998764 222332 2222 3788998 77555555443 35678888876443 3333
Q ss_pred ecCccceEEEEEcCCCCeEE-EEeCCCcEEEecCCCCCCCCCCCCcccceeeeecCCCCceeEEecCCCeEEEEEecccC
Q 021160 191 VGDRHVVNQLEPHPHIPMFA-TCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQ 269 (316)
Q Consensus 191 ~~~~~~v~~~~~~p~~~~l~-s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~ 269 (316)
...-.....+++++++..|. +-...+.|...++.+.....+.........++.. ++.++++-...+.|...+..+++
T Consensus 162 ~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~v~~~~l~~P~glav~--~~~ly~tD~~~~~I~~~dk~tg~ 239 (628)
T 4a0p_A 162 VPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIADDLPHPFGLTQY--QDYIYWTDWSRRSIERANKTSGQ 239 (628)
T ss_dssp ECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECCSCEEEEEEE--TTEEEEEETTTTEEEEEETTTCC
T ss_pred ECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceEEeeccCCCceEEEEE--CCEEEEecCCCCEEEEEECCCCC
Confidence 33345678999999766654 4456678999998765432222111222233322 35666777777878777755553
No 267
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.03 E-value=0.004 Score=52.31 Aligned_cols=192 Identities=10% Similarity=-0.002 Sum_probs=111.2
Q ss_pred EEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCC-eEEE-ecCCcE
Q 021160 38 NAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE-LLIS-YNDELV 115 (316)
Q Consensus 38 ~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~s-~~d~~i 115 (316)
.+.+..+.. +|+.+ ....|+.+++..... ..+.. .......++|.+.+. ++++ ...+.|
T Consensus 80 ~C~~~~~~~--~l~~~-~~~~I~~i~~~~~~~---------------~~~~~-~~~~~~gl~~d~~~~~ly~~D~~~~~I 140 (386)
T 3v65_B 80 SCKALGPEP--VLLFA-NRIDIRQVLPHRSEY---------------TLLLN-NLENAIALDFHHRRELVFWSDVTLDRI 140 (386)
T ss_dssp CEEECSSCC--EEEEE-CBSCEEEECTTSCCC---------------EEEEC-SCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred eECCccccc--eeEee-cCccceeeccCCCcE---------------EEEec-CCCccEEEEEecCCCeEEEEeCCCCcE
Confidence 345555532 33333 335688888775531 11111 133578999997655 5555 368889
Q ss_pred EEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCC-CcEEEEeccCCeEEEEeccCCeeEEEeecCc
Q 021160 116 YLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPN-DEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR 194 (316)
Q Consensus 116 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~~ 194 (316)
+.+++... .....+..... ....+++ .+. +.+.++-...+.|.+.++........+...-
T Consensus 141 ~r~~~~g~----------------~~~~~~~~~~~--~p~glav-d~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l 201 (386)
T 3v65_B 141 LRANLNGS----------------NVEEVVSTGLE--SPGGLAV-DWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSL 201 (386)
T ss_dssp EEEETTSC----------------CEEEEECSSCS--CCCCEEE-ETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSC
T ss_pred EEEecCCC----------------CcEEEEeCCCC--CccEEEE-EeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCC
Confidence 99998765 22222222222 2567887 654 5555566667889998887544333333333
Q ss_pred cceEEEEEcCCCCeEE-EEeCC-CcEEEecCCCCCCCCCC-CCcccceeeeecC-CCCceeEEecCCCeEEEEEeccc
Q 021160 195 HVVNQLEPHPHIPMFA-TCGIE-KTVKLWAPMPTDFPPLP-DNAEKIMKANKQG-REDHSRITLTPDVIMHVLRLQRR 268 (316)
Q Consensus 195 ~~v~~~~~~p~~~~l~-s~~~d-~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~s~~~d~~~~~w~~~~~ 268 (316)
.....++++|.+..|. +-... +.|...++.......+. ........++ +. .++.+.++-+..+.|..+++...
T Consensus 202 ~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla-vd~~~~~lY~aD~~~~~I~~~d~dG~ 278 (386)
T 3v65_B 202 EKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLT-IDYAGRRMYWVDAKHHVIERANLDGS 278 (386)
T ss_dssp SCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEE-EEGGGTEEEEEETTTTEEEEECTTSC
T ss_pred CCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEE-EeCCCCEEEEEECCCCEEEEEeCCCC
Confidence 5678999999766544 44444 67888887765432221 1112223344 44 45667777777888888887644
No 268
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.03 E-value=0.0026 Score=58.46 Aligned_cols=202 Identities=7% Similarity=-0.028 Sum_probs=116.5
Q ss_pred cceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCC-eEEE-ecC
Q 021160 35 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE-LLIS-YND 112 (316)
Q Consensus 35 ~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~s-~~d 112 (316)
..+.+++|++.+..++++-...+.|+.+++...... . ....+..........|++.+.+. ++++ ...
T Consensus 424 ~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~------~-----~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~ 492 (791)
T 3m0c_C 424 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV------S-----SYDTVISRDIQAPDGLAVDWIHSNIYWTDSVL 492 (791)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC-------------------CEEEECSSCSCCCEEEEETTTTEEEEEETTT
T ss_pred CceEEEeecccCCeeEEeeccceeEEEEeccCCCCC------c-----ceeEEEecCCCCcceeeeeecCCcEEEEecCC
Confidence 356789999865356666667788888888743200 0 00111122233456788988775 5555 468
Q ss_pred CcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEec-c-CCeEEEEeccCCeeEEEe
Q 021160 113 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGS-D-CGHLFIWKKKGGKLVRLM 190 (316)
Q Consensus 113 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~-~-dg~v~~wd~~~~~~~~~~ 190 (316)
+.|.+.++... .....+...... ...|++ .|.+.+|+... . .+.|...++........+
T Consensus 493 ~~I~v~~ldG~----------------~~~~l~~~~l~~--P~gIaV-Dp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv 553 (791)
T 3m0c_C 493 GTVSVADTKGV----------------KRKTLFRENGSK--PRAIVV-DPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV 553 (791)
T ss_dssp TEEEEEETTSS----------------SEEEEEECTTCC--EEEEEE-ETTTTEEEEEECSSSCEEEEEETTSCCEEEEE
T ss_pred CeEEEEeCCCC----------------eEEEEEeCCCCC--cceEEE-ecCCCCEEEecCCCCCeEEEEecCCCceEEEE
Confidence 89999998765 222222223322 788998 77655555543 2 378888888744433333
Q ss_pred ecCccceEEEEEcCCCCeEEEE-eCCCcEEEecCCCCCCCCCCC---CcccceeeeecCCCCceeEEecCCCeEEEEEec
Q 021160 191 VGDRHVVNQLEPHPHIPMFATC-GIEKTVKLWAPMPTDFPPLPD---NAEKIMKANKQGREDHSRITLTPDVIMHVLRLQ 266 (316)
Q Consensus 191 ~~~~~~v~~~~~~p~~~~l~s~-~~d~~i~iwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~ 266 (316)
...-.....|++.+.+..|..+ .....|...++.......+.. .....+.++. .++.++++-...+.|...+..
T Consensus 554 ~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav--~~~~lYwtD~~~~~I~~~dk~ 631 (791)
T 3m0c_C 554 TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV--FEDKVFWTDIINEAIFSANRL 631 (791)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEE--ETTEEEEEETTTTEEEEEETT
T ss_pred eCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEE--eCCEEEEEECCCCEEEEEeCC
Confidence 3333568899999876665444 456689999987655333211 1111122321 234566676677777777654
Q ss_pred cc
Q 021160 267 RR 268 (316)
Q Consensus 267 ~~ 268 (316)
++
T Consensus 632 tG 633 (791)
T 3m0c_C 632 TG 633 (791)
T ss_dssp TC
T ss_pred CC
Confidence 44
No 269
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.00 E-value=0.0042 Score=57.50 Aligned_cols=201 Identities=6% Similarity=0.041 Sum_probs=121.1
Q ss_pred ccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEecCC
Q 021160 34 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDE 113 (316)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d~ 113 (316)
...|.++...+++ . +..|+.+ .|.+|+..+++........ .....-....|.++...++|.+.+++.++
T Consensus 262 ~~~i~~i~~d~~g-~-lWigt~~-Gl~~~~~~~~~~~~~~~~~--------~~~~~l~~~~i~~i~~D~~g~lWigt~~~ 330 (795)
T 4a2l_A 262 SNYIRSLAMDSQN-R-LWIGTFN-DLNIYHEGTDSFASYSSNP--------VENGSLSQRSVRSIFMDSQGGMWLGTYFG 330 (795)
T ss_dssp CSBEEEEEECTTS-C-EEEEESS-CEEEEETTTTEEEEECCCT--------TSTTSCSSSCEEEEEECTTSCEEEEESSS
T ss_pred CCeEEEEEEcCCC-C-EEEEeCC-hhheEcCCCCeEEEEecCC--------CCCCCCCCCcEEEEEEeCCcCEEEEECCC
Confidence 3569999999887 4 4445555 6889998766532110000 00001124579999999999988887777
Q ss_pred cEEEEEcCCCCCCCCccCCccccccCCCcceeeC-----CcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCeeEE
Q 021160 114 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSG-----HRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVR 188 (316)
Q Consensus 114 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~ 188 (316)
-|..|+.... ....+.. ......|.++.. .++|. |..|+.++-|..|+..+++...
T Consensus 331 Gl~~~~~~~~-----------------~~~~~~~~~~~~~l~~~~V~~i~~-d~~g~-lWiGt~~~Gl~~~~~~~~~~~~ 391 (795)
T 4a2l_A 331 GLNYYHPIRN-----------------RFKNIRNIPYKNSLSDNVVSCIVE-DKDKN-LWIGTNDGGLNLYNPITQRFTS 391 (795)
T ss_dssp CEEEECGGGG-----------------SSEEECCCTTSSSCSCSSEEEEEE-CTTSC-EEEEESSSCEEEECTTTCCEEE
T ss_pred CeEEeCCCcc-----------------cceEEcCCCCCCCCCCCeeEEEEE-CCCCC-EEEEECCCCeEEEcCCCCcEEE
Confidence 8899987654 1112211 001123888887 77766 5557777789999988766433
Q ss_pred Eeec--------CccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCCCCCCCC-----CcccceeeeecCCCCceeEEec
Q 021160 189 LMVG--------DRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPD-----NAEKIMKANKQGREDHSRITLT 255 (316)
Q Consensus 189 ~~~~--------~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~s~~ 255 (316)
.... ....|.+++..+++..|..|+.++-|..||..+++...+.. ....+..+. ...++.+.+...
T Consensus 392 ~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~-~d~~g~lwigt~ 470 (795)
T 4a2l_A 392 YTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAIL-PDGEGNLWLGTL 470 (795)
T ss_dssp ECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEE-ECSSSCEEEEES
T ss_pred EecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEE-ECCCCCEEEEec
Confidence 2211 23568899988888845556666779999988765322221 122343443 344565555544
Q ss_pred CCCeEEEEEecc
Q 021160 256 PDVIMHVLRLQR 267 (316)
Q Consensus 256 ~d~~~~~w~~~~ 267 (316)
+| +..++..+
T Consensus 471 -~G-l~~~~~~~ 480 (795)
T 4a2l_A 471 -SA-LVRFNPEQ 480 (795)
T ss_dssp -SC-EEEEETTT
T ss_pred -Cc-eeEEeCCC
Confidence 44 56676544
No 270
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.94 E-value=0.00033 Score=63.48 Aligned_cols=54 Identities=9% Similarity=0.002 Sum_probs=41.4
Q ss_pred CCeEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC
Q 021160 173 CGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD 227 (316)
Q Consensus 173 dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~ 227 (316)
+|.|..||+.+++.+-....+. ......+...+..++.++.|+.++.||.++++
T Consensus 437 ~g~l~A~D~~tG~~~W~~~~~~-~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~ 490 (668)
T 1kv9_A 437 SGALLAWDPVKQKAAWKVPYPT-HWNGGTLSTAGNLVFQGTAAGQMHAYSADKGE 490 (668)
T ss_dssp EEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred cceEEEEeCCCCcEEEEccCCC-CCcCceeEeCCCEEEEECCcccchhhhhhcCh
Confidence 4889999999999887776433 23333344467788888999999999999887
No 271
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.92 E-value=0.0078 Score=53.88 Aligned_cols=198 Identities=9% Similarity=-0.033 Sum_probs=113.1
Q ss_pred ceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCC-eEEE-ecCC
Q 021160 36 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE-LLIS-YNDE 113 (316)
Q Consensus 36 ~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~s-~~d~ 113 (316)
...+++|++.+..++.+-...+.|..+++.... ....+..........+++.+.+. ++++ ...+
T Consensus 41 ~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~--------------~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~ 106 (619)
T 3s94_A 41 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTE--------------SVQNVVVSGLLSPDGLACDWLGEKLYWTDSETN 106 (619)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEEC-------------------CEEEECSSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred ceEEEEEEeCCCEEEEEECCCCeEEEEEccCCC--------------ceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCC
Confidence 577999998773555555567788888886442 00111122224578899998665 5555 3688
Q ss_pred cEEEEEcCCCCCCCCccCCccccccCCCcceee-CCcCCceeeeEEEecCCCcEEEEec--cCCeEEEEeccCCeeEEEe
Q 021160 114 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYS-GHRNSQTVKGVNFFGPNDEYVMSGS--DCGHLFIWKKKGGKLVRLM 190 (316)
Q Consensus 114 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~l~~~~--~dg~v~~wd~~~~~~~~~~ 190 (316)
.|.+.+++.. ....+. .... ....+++ .|.+.+|+... ..+.|...++.........
T Consensus 107 ~I~v~~~dG~-----------------~~~~l~~~~l~--~P~~Iav-dp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~ 166 (619)
T 3s94_A 107 RIEVSNLDGS-----------------LRKVLFWQELD--QPRAIAL-DPSSGFMYWTDWGEVPKIERAGMDGSSRFIII 166 (619)
T ss_dssp EEEEEETTSC-----------------SCEEEECSSCS--CCCCEEE-ETTTTEEEEEECSSSCEEEEEETTSCSCEEEE
T ss_pred EEEEEECCCC-----------------CEEEEEeCCCC--CCceEEE-ecCCCeEEEeccCCCCEEEEEECCCCceEEEE
Confidence 9999998765 333333 2332 2678888 77655555443 2467777777633322223
Q ss_pred ecCccceEEEEEcCCCCeEE-EEeCCCcEEEecCCCCCCCCCCC-CcccceeeeecCCCCceeEEecCCCeEEEEEeccc
Q 021160 191 VGDRHVVNQLEPHPHIPMFA-TCGIEKTVKLWAPMPTDFPPLPD-NAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR 268 (316)
Q Consensus 191 ~~~~~~v~~~~~~p~~~~l~-s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~ 268 (316)
...-...+.+++++++..|. +-...+.|...++.......+.. .......++. . ++.++++-...+.|...+..++
T Consensus 167 ~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~-~-~~~ly~td~~~~~V~~~d~~tg 244 (619)
T 3s94_A 167 NSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTL-F-EDILYWTDWSTHSILACNKYTG 244 (619)
T ss_dssp CSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEE-S-SSEEEEECTTTCSEEEEESSSC
T ss_pred eCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEE-e-CCEEEEecCCCCEEEEEECCCC
Confidence 22335678999999766644 44566789999987754332221 1111222221 1 2356667667777777776554
Q ss_pred C
Q 021160 269 Q 269 (316)
Q Consensus 269 ~ 269 (316)
+
T Consensus 245 ~ 245 (619)
T 3s94_A 245 E 245 (619)
T ss_dssp C
T ss_pred c
Confidence 3
No 272
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.91 E-value=0.004 Score=57.55 Aligned_cols=198 Identities=8% Similarity=0.023 Sum_probs=116.8
Q ss_pred ccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEecCC
Q 021160 34 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDE 113 (316)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d~ 113 (316)
...|.++...+++ .|..|+.++.|..|+..++..... .. ........|.++...++|.+.+++.++
T Consensus 362 ~~~v~~i~~d~~g--~lWigt~~~Gl~~~~~~~~~~~~~----------~~--~~~~~~~~v~~i~~d~~g~lWigt~~~ 427 (781)
T 3v9f_A 362 NKVVSSVCDDGQG--KLWIGTDGGGINVFENGKRVAIYN----------KE--NRELLSNSVLCSLKDSEGNLWFGTYLG 427 (781)
T ss_dssp SSCEEEEEECTTS--CEEEEEBSSCEEEEETTEEEEECC-----------------CCCSBEEEEEECTTSCEEEEETTE
T ss_pred CcceEEEEEcCCC--CEEEEeCCCcEEEEECCCCeEEEc----------cC--CCCCCCcceEEEEECCCCCEEEEeccC
Confidence 3568999998877 355667667799999876542110 00 001224578999888888888877667
Q ss_pred cEEEEEcCCCCCCCCccCCccccccCCCcceeeC-CcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCeeEEEeec
Q 021160 114 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSG-HRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVG 192 (316)
Q Consensus 114 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~ 192 (316)
-+..++..++ ....+.. ......|.++.. .+++.+. .|+. +-+..++..+++.......
T Consensus 428 Gl~~~~~~~~-----------------~~~~~~~~~~~~~~v~~i~~-d~~g~lw-igt~-~Gl~~~~~~~~~~~~~~~~ 487 (781)
T 3v9f_A 428 NISYYNTRLK-----------------KFQIIELEKNELLDVRVFYE-DKNKKIW-IGTH-AGVFVIDLASKKVIHHYDT 487 (781)
T ss_dssp EEEEECSSSC-----------------EEEECCSTTTCCCCEEEEEE-CTTSEEE-EEET-TEEEEEESSSSSCCEEECT
T ss_pred CEEEEcCCCC-----------------cEEEeccCCCCCCeEEEEEE-CCCCCEE-EEEC-CceEEEeCCCCeEEecccC
Confidence 7888887654 1122221 011123888876 6666644 4555 5688999887665433222
Q ss_pred C-----ccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCCCCCCC---CC-cccceeeeecCCCCceeEEecCCCeEEEE
Q 021160 193 D-----RHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLP---DN-AEKIMKANKQGREDHSRITLTPDVIMHVL 263 (316)
Q Consensus 193 ~-----~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~s~~~d~~~~~w 263 (316)
. ...|.++...+++.+.+.. .++-+..|+..+++...+. +. ...+..+. ...++.+.++.. +|.+..+
T Consensus 488 ~~~~~~~~~i~~i~~d~~g~lWigt-~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~-~d~~g~lWi~T~-~Glv~~~ 564 (781)
T 3v9f_A 488 SNSQLLENFVRSIAQDSEGRFWIGT-FGGGVGIYTPDMQLVRKFNQYEGFCSNTINQIY-RSSKGQMWLATG-EGLVCFP 564 (781)
T ss_dssp TTSSCSCSCEEEEEECTTCCEEEEE-SSSCEEEECTTCCEEEEECTTTTCSCSCEEEEE-ECTTSCEEEEET-TEEEEES
T ss_pred cccccccceeEEEEEcCCCCEEEEE-cCCCEEEEeCCCCeEEEccCCCCCCCCeeEEEE-ECCCCCEEEEEC-CCceEEE
Confidence 2 3578999999888865443 3344777888765422221 11 12233333 344555555544 6664666
Q ss_pred Eeccc
Q 021160 264 RLQRR 268 (316)
Q Consensus 264 ~~~~~ 268 (316)
+..++
T Consensus 565 d~~~~ 569 (781)
T 3v9f_A 565 SARNF 569 (781)
T ss_dssp CTTTC
T ss_pred CCCCC
Confidence 65544
No 273
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.90 E-value=0.013 Score=54.11 Aligned_cols=208 Identities=9% Similarity=0.001 Sum_probs=117.5
Q ss_pred ccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccc-cccCCCcccEEEEEEccCCCeEEEecC
Q 021160 34 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPR-HLIGKNNIHITGLAYSNTSELLISYND 112 (316)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~l~s~~d 112 (316)
...|.++...+++ .+..|+..+.|.++|..+.+...... .....+... ....-....|.++...++|.+.+++.+
T Consensus 257 ~~~i~~i~~d~~g--~lWigt~~~Gl~~~~~~~~~~~~~~~--~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lWigt~~ 332 (781)
T 3v9f_A 257 SSYIFSIKQLKDN--KLWIATELNGIMILDLQQNQFLLPEQ--IRFEFIREGDNNYSLSNASARYIFQDSFNNIWIGTWG 332 (781)
T ss_dssp CCCEEEEEECTTS--EEEEEESSSCEEEEETTCC-----------CEEECBCSSTTSBSSSCEEEEEECSSCCEEEEEBS
T ss_pred CceEEEEEECCCC--CEEEEeCCCCeEEECCCCCeeeeeec--cccccccCCCCCCCCCCCeEEEEEEeCCCCEEEEecC
Confidence 3568999998877 45566665678899987665321100 000000000 000112457899999999998888777
Q ss_pred CcEEEEEcCCCCCCCCccCCccccccCCCcceeeC--------CcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCC
Q 021160 113 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSG--------HRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGG 184 (316)
Q Consensus 113 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~ 184 (316)
+-|..++.... ....+.. ......|.++.. .+++. |..|+.++-+..|+..++
T Consensus 333 ~Gl~~~~~~~~-----------------~~~~~~~~~~~~~~~~l~~~~v~~i~~-d~~g~-lWigt~~~Gl~~~~~~~~ 393 (781)
T 3v9f_A 333 GGINFISNAPP-----------------TFHTWSYSPTQMNESSLSNKVVSSVCD-DGQGK-LWIGTDGGGINVFENGKR 393 (781)
T ss_dssp SCEEEECSSCC-----------------SCEEEC----CCCSSCCSSSCEEEEEE-CTTSC-EEEEEBSSCEEEEETTEE
T ss_pred CeEEEeCCCCC-----------------cceeeccCccccccCCCCCcceEEEEE-cCCCC-EEEEeCCCcEEEEECCCC
Confidence 77888887654 1222210 001123888876 66665 556676667888998754
Q ss_pred eeEEEe---ecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCCCCCCCC---CcccceeeeecCCCCceeEEecCCC
Q 021160 185 KLVRLM---VGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPD---NAEKIMKANKQGREDHSRITLTPDV 258 (316)
Q Consensus 185 ~~~~~~---~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~s~~~d~ 258 (316)
+..... ......|.++...+++.+.+ |+.++-+..++..+++...+.. ....+..+. ...++.+.+.. . +
T Consensus 394 ~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~-~d~~g~lwigt-~-~ 469 (781)
T 3v9f_A 394 VAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQIIELEKNELLDVRVFY-EDKNKKIWIGT-H-A 469 (781)
T ss_dssp EEECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEEECCSTTTCCCCEEEEE-ECTTSEEEEEE-T-T
T ss_pred eEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEE-ECCCCCEEEEE-C-C
Confidence 432111 12335788998888877654 5556678889987765332221 123343333 34455555544 3 4
Q ss_pred eEEEEEeccc
Q 021160 259 IMHVLRLQRR 268 (316)
Q Consensus 259 ~~~~w~~~~~ 268 (316)
-+..++..++
T Consensus 470 Gl~~~~~~~~ 479 (781)
T 3v9f_A 470 GVFVIDLASK 479 (781)
T ss_dssp EEEEEESSSS
T ss_pred ceEEEeCCCC
Confidence 4667776654
No 274
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.90 E-value=3.8e-05 Score=69.83 Aligned_cols=200 Identities=8% Similarity=-0.039 Sum_probs=108.1
Q ss_pred ceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCC-CeEEE-ecCC
Q 021160 36 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTS-ELLIS-YNDE 113 (316)
Q Consensus 36 ~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~s-~~d~ 113 (316)
.+.+++|++.+..++++-...+.|+.+++...... . ....+..........|++.+.+ +++++ ...+
T Consensus 407 ~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~------~-----~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~ 475 (699)
T 1n7d_A 407 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV------S-----SYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLG 475 (699)
T ss_dssp TCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-------C-----CCCCBCCSCC--CCCEECCCSSSBCEECCTTTS
T ss_pred ceEEEccccccCeEEEEecCCCeEEEEecCCCCCC------c-----ceEEEEeCCCCCcceEEEEeeCCcEEEEeccCC
Confidence 45688999876345555556788999988751100 0 0001101111234467777544 56666 4678
Q ss_pred cEEEEEcCCCCCCCCccCCccccccCCCccee-eCCcCCceeeeEEEecCCCcEEEEecc--CCeEEEEeccCCeeEEEe
Q 021160 114 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVY-SGHRNSQTVKGVNFFGPNDEYVMSGSD--CGHLFIWKKKGGKLVRLM 190 (316)
Q Consensus 114 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~l~~~~~--dg~v~~wd~~~~~~~~~~ 190 (316)
.|.++++... ....+ ..... ....+++ .|.+.+|+.... .+.|..+++........+
T Consensus 476 ~I~v~d~dg~-----------------~~~~l~~~~~~--~P~giav-Dp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~ 535 (699)
T 1n7d_A 476 TVSVADTKGV-----------------KRKTLFREQGS--KPRAIVV-DPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV 535 (699)
T ss_dssp CEEEEBSSSC-----------------CEEEECCCSSC--CCCCEEC-CSSSSCCEECCCSSSCCEEBCCSSSCCCCEES
T ss_pred eEEEEecCCC-----------------ceEEEEeCCCC--CcceEEE-ccCCCcEEEcccCCCCeEEEEeCCCCCeeEEE
Confidence 8999998754 22222 21122 2577887 776555554432 267888777633222222
Q ss_pred ecCccceEEEEEcCCCCe-EEEEeCCCcEEEecCCCCCCCCCCC---CcccceeeeecCCCCceeEEecCCCeEEEEEec
Q 021160 191 VGDRHVVNQLEPHPHIPM-FATCGIEKTVKLWAPMPTDFPPLPD---NAEKIMKANKQGREDHSRITLTPDVIMHVLRLQ 266 (316)
Q Consensus 191 ~~~~~~v~~~~~~p~~~~-l~s~~~d~~i~iwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~ 266 (316)
...-...+.|+|+|++.. +++-+..+.|..+++.......+.. .......++. .++.++++-...+.|..++..
T Consensus 536 ~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glav--d~~~lywtd~~~~~V~~~d~~ 613 (699)
T 1n7d_A 536 TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV--FEDKVFWTDIINEAIFSANRL 613 (699)
T ss_dssp CSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEE--ETTEEEEECSTTTCEEEEETT
T ss_pred eCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEE--ECCEEEEEeCCCCeEEEEEcc
Confidence 222245678999987655 4555567789999987644222211 1111112221 123566666667777777754
Q ss_pred cc
Q 021160 267 RR 268 (316)
Q Consensus 267 ~~ 268 (316)
++
T Consensus 614 ~G 615 (699)
T 1n7d_A 614 TG 615 (699)
T ss_dssp TE
T ss_pred CC
Confidence 44
No 275
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.89 E-value=0.012 Score=52.85 Aligned_cols=183 Identities=9% Similarity=-0.064 Sum_probs=106.4
Q ss_pred cCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCC-eEEEe-cCCcEEEEEcCCCCCCCCccCC
Q 021160 55 SDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE-LLISY-NDELVYLFEKNMGLGPSPLSLS 132 (316)
Q Consensus 55 ~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~s~-~d~~i~iwd~~~~~~~~~~~~~ 132 (316)
....|+..++.+... ...+....-.....++|.+.+. ++++. .++.|+.+++...
T Consensus 13 ~~~~I~~i~l~~~~~--------------~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~--------- 69 (628)
T 4a0p_A 13 RRADIRRISLETNNN--------------NVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGS--------- 69 (628)
T ss_dssp ETTEEEEEESSCTTC--------------EEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---------
T ss_pred eCCcEEEEECCCCCc--------------ceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCC---------
Confidence 557899999976531 0011011234578999998765 55553 6889999998764
Q ss_pred ccccccCCCcceeeCCcCCceeeeEEEecCC-CcEEEEeccCCeEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEE
Q 021160 133 PEDLQKREEPQVYSGHRNSQTVKGVNFFGPN-DEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFAT 211 (316)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s 211 (316)
.....+..... ....+++ .+. +++.++-...+.|.+.++........+...-.....++++|....|..
T Consensus 70 -------~~~~v~~~g~~--~P~GlAv-D~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~ 139 (628)
T 4a0p_A 70 -------ALEHVVEFGLD--YPEGMAV-DWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYW 139 (628)
T ss_dssp -------SCEEEECSSCS--CCCEEEE-ETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEE
T ss_pred -------CcEEEEeCCCC--CcceEEE-EeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEE
Confidence 22222222212 2667887 655 445555566789999998754322222233346789999996555443
Q ss_pred Ee--CCCcEEEecCCCCCCCCCCCCcccceeeeecCCCCceeEEecCCCeEEEEEecccCc
Q 021160 212 CG--IEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQT 270 (316)
Q Consensus 212 ~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~~ 270 (316)
.. ..+.|...++.......+.........++.-..++++.++-...+.|...++.....
T Consensus 140 tD~g~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~ 200 (628)
T 4a0p_A 140 TEWGGKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR 200 (628)
T ss_dssp EECSSSCEEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred eCCCCCCEEEEEeCCCCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce
Confidence 33 356777777776553332222222333442223466777777778888888765433
No 276
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.88 E-value=0.00044 Score=62.53 Aligned_cols=157 Identities=6% Similarity=-0.003 Sum_probs=88.4
Q ss_pred EEEECC-CCCcEEEEEecCC-----------cEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCe
Q 021160 39 AIVIDP-RNPNYFAVGGSDE-----------YARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSEL 106 (316)
Q Consensus 39 ~~~~~~-~~~~~l~~g~~dg-----------~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 106 (316)
++++.| ++ ++++.|+.+. .+.+||+.++++... ..+...+.....++++..++++
T Consensus 190 ~~av~~~~g-~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~------------~~~~~~~~~~~~~~~~~~~g~l 256 (656)
T 1k3i_A 190 AAAIEPTSG-RVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDR------------TVTVTKHDMFCPGISMDGNGQI 256 (656)
T ss_dssp EEEEETTTT-EEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCC------------EEEECSCCCSSCEEEECTTSCE
T ss_pred eEEEEecCC-EEEEEecccccccccCCCCeEEEEEEeCCCCcEEeC------------cccCCCCCCccccccCCCCCCE
Confidence 566677 66 7888887543 588999988875321 1111222333445677889997
Q ss_pred EEEe--cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEec-cC-----CeEEE
Q 021160 107 LISY--NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGS-DC-----GHLFI 178 (316)
Q Consensus 107 l~s~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~-~d-----g~v~~ 178 (316)
++.+ .+..+.+||..+.. ...+..-.....-.+++. -+++++++.|+ .+ ..+.+
T Consensus 257 yv~GG~~~~~v~~yd~~t~~-----------------W~~~~~~~~~R~~~s~~~-~~dg~iyv~GG~~~~~~~~~~~e~ 318 (656)
T 1k3i_A 257 VVTGGNDAKKTSLYDSSSDS-----------------WIPGPDMQVARGYQSSAT-MSDGRVFTIGGSWSGGVFEKNGEV 318 (656)
T ss_dssp EEECSSSTTCEEEEEGGGTE-----------------EEECCCCSSCCSSCEEEE-CTTSCEEEECCCCCSSSCCCCEEE
T ss_pred EEeCCCCCCceEEecCcCCc-----------------eeECCCCCccccccceEE-ecCCeEEEEeCcccCCcccccceE
Confidence 7774 35689999987651 111111111111223444 46889999888 34 56899
Q ss_pred EeccCCeeEEEe-----ecCccceEEEEEcCCCCeEEEEeCCC---------cEEEecCCCCC
Q 021160 179 WKKKGGKLVRLM-----VGDRHVVNQLEPHPHIPMFATCGIEK---------TVKLWAPMPTD 227 (316)
Q Consensus 179 wd~~~~~~~~~~-----~~~~~~v~~~~~~p~~~~l~s~~~d~---------~i~iwd~~~~~ 227 (316)
||..+.+-...- ...... ....+..++..++.++.++ .+..||+....
T Consensus 319 yd~~t~~W~~~~~~~~~p~~~~~-~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~ 380 (656)
T 1k3i_A 319 YSPSSKTWTSLPNAKVNPMLTAD-KQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSG 380 (656)
T ss_dssp EETTTTEEEEETTSCSGGGCCCC-TTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTC
T ss_pred eCCCCCcceeCCCcccccccccc-ccceeecCCceEEEECCCCcEEEecCccceeeeecCCcc
Confidence 999877643320 000000 0122335566666665554 45678877654
No 277
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.87 E-value=0.0013 Score=58.46 Aligned_cols=135 Identities=11% Similarity=0.061 Sum_probs=77.5
Q ss_pred CCC---cEEEEeccCCeEEEEeccCCeeEEEeecCc------------c-ce--------------------------EE
Q 021160 162 PND---EYVMSGSDCGHLFIWKKKGGKLVRLMVGDR------------H-VV--------------------------NQ 199 (316)
Q Consensus 162 ~~~---~~l~~~~~dg~v~~wd~~~~~~~~~~~~~~------------~-~v--------------------------~~ 199 (316)
.+| ..++.++.+|.++++|..+|+.+....... + ++ ..
T Consensus 318 ~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~ 397 (599)
T 1w6s_A 318 KDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGH 397 (599)
T ss_dssp TTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCB
T ss_pred cCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCC
Confidence 467 567788999999999999999887654211 0 11 23
Q ss_pred EEEcCCCCeEEEEe---------------------------------------CCCcEEEecCCCCCC-CCCCCCcccce
Q 021160 200 LEPHPHIPMFATCG---------------------------------------IEKTVKLWAPMPTDF-PPLPDNAEKIM 239 (316)
Q Consensus 200 ~~~~p~~~~l~s~~---------------------------------------~d~~i~iwd~~~~~~-~~~~~~~~~~~ 239 (316)
++++|+..++.... .+|.|..||+.++++ -+.+ ...+..
T Consensus 398 ~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~-~~~~~~ 476 (599)
T 1w6s_A 398 DSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKM-ERFAVW 476 (599)
T ss_dssp CEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEE-ESSCCC
T ss_pred ccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEec-CCCCcc
Confidence 56777655543321 346788888887762 1111 011111
Q ss_pred eeeecCCCCceeEEecCCCeEEEEEecccCcceeEEeeccc--ccccccCCCCeEEEEeccC
Q 021160 240 KANKQGREDHSRITLTPDVIMHVLRLQRRQTLAYRERRYNA--ADFESDEEEGETYLLGFSD 299 (316)
Q Consensus 240 ~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~ 299 (316)
.- .....+.+++.++.|+.++.+|.++++.+ +...-+.. .....-+.+|++|+.-.+.
T Consensus 477 ~g-~~~tagg~vf~gt~dg~l~A~D~~tG~~l-W~~~l~~g~~~~P~~y~~~G~qyv~~~~G 536 (599)
T 1w6s_A 477 GG-TMATAGDLVFYGTLDGYLKARDSDTGDLL-WKFKIPSGAIGYPMTYTHKGTQYVAIYYG 536 (599)
T ss_dssp SB-CEEETTTEEEEECTTSEEEEEETTTCCEE-EEEECSSCCCSCCEEEEETTEEEEEEEEC
T ss_pred Cc-ceEecCCEEEEECCCCeEEEEECCCCCEE-EEeeCCCCcEeccEEEEeCCEEEEEEEcc
Confidence 00 01124567777899999999999988654 33211111 1111224577788775544
No 278
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.84 E-value=0.0015 Score=60.05 Aligned_cols=112 Identities=9% Similarity=-0.008 Sum_probs=72.4
Q ss_pred cEEEEEEc-cCCCeEEEe--cCC----cEEEEEcCCC-CCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCc
Q 021160 94 HITGLAYS-NTSELLISY--NDE----LVYLFEKNMG-LGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDE 165 (316)
Q Consensus 94 ~i~~~~~~-~~~~~l~s~--~d~----~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 165 (316)
.+...+|| |+|++|+-+ .+| +|+++|+.++ . .....+.. ....++| +|+++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~---------------~l~~~~~~-----~~~~~~W-spDg~ 233 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQ---------------TIADKVSG-----TNGEIVW-GPDHT 233 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTC---------------CCCCCEEE-----ECSCCEE-CSSTT
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCE---------------eCCccccC-----ceeeEEE-ecCCC
Confidence 67889999 999976653 222 4999999775 2 11111111 1346778 99998
Q ss_pred EEEEeccC-----CeEEEEeccCCee--EEEee-cCccceEEEEEcCCCCeEEEEe---CCCcEEEecCCCC
Q 021160 166 YVMSGSDC-----GHLFIWKKKGGKL--VRLMV-GDRHVVNQLEPHPHIPMFATCG---IEKTVKLWAPMPT 226 (316)
Q Consensus 166 ~l~~~~~d-----g~v~~wd~~~~~~--~~~~~-~~~~~v~~~~~~p~~~~l~s~~---~d~~i~iwd~~~~ 226 (316)
.|+....+ ..|+++++.+++. ...+. ........+.|+|++++|+..+ ....|+++|+.++
T Consensus 234 ~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 234 SLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp EEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred EEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 88777654 3688888877642 22222 2223456789999999876554 2346888888765
No 279
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.83 E-value=0.0017 Score=55.44 Aligned_cols=154 Identities=14% Similarity=0.185 Sum_probs=94.7
Q ss_pred ceEEEEECC-CCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCC-eEEEec-C
Q 021160 36 RLNAIVIDP-RNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE-LLISYN-D 112 (316)
Q Consensus 36 ~v~~~~~~~-~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~s~~-d 112 (316)
....++++| ++ ..|.++...+.|+.+|+..+.+. . + .........++|+++++ ++++.. +
T Consensus 138 ~P~~lavdp~~~-g~Lyv~d~~~~I~~id~~~~~v~----------~-----~-~~~~~~P~~ia~d~~G~~lyvad~~~ 200 (430)
T 3tc9_A 138 GAVWLSFDPKNH-NHLYLVGEQHPTRLIDFEKEYVS----------T-----V-YSGLSKVRTICWTHEADSMIITNDQN 200 (430)
T ss_dssp CCCEEEEETTEE-EEEEEEEBTEEEEEEETTTTEEE----------E-----E-ECCCSCEEEEEECTTSSEEEEEECCS
T ss_pred CCCEEEECCCCC-CeEEEEeCCCcEEEEECCCCEEE----------E-----E-ecCCCCcceEEEeCCCCEEEEEeCCC
Confidence 457889998 34 34555444488999998866521 1 1 11234577999999998 555532 2
Q ss_pred C----cEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecC-CCcEEEEeccCCeEEEEeccCCeeE
Q 021160 113 E----LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGP-NDEYVMSGSDCGHLFIWKKKGGKLV 187 (316)
Q Consensus 113 ~----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~dg~v~~wd~~~~~~~ 187 (316)
+ .+.+++..... .....+... .....+++ +| ++.++++-..++.|+.++...+...
T Consensus 201 ~~~~~~v~~~~~~g~~---------------~~~~~l~~~---~~p~giav-dp~~g~lyv~d~~~~~V~~~~~~~~~~~ 261 (430)
T 3tc9_A 201 NNDRPNNYILTRESGF---------------KVITELTKG---QNCNGAET-HPINGELYFNSWNAGQVFRYDFTTQETT 261 (430)
T ss_dssp CTTSEEEEEEEGGGTS---------------CSEEEEEEC---SSCCCEEE-CTTTCCEEEEETTTTEEEEEETTTTEEE
T ss_pred CcccceEEEEeCCCce---------------eeeeeeccC---CCceEEEE-eCCCCEEEEEECCCCEEEEEECCCCcEE
Confidence 2 34444443320 111222211 12567888 78 6777777777889999999877653
Q ss_pred EEeec-CccceEEEEEcCCCCe-EEEEeCCCcEEEecCCC
Q 021160 188 RLMVG-DRHVVNQLEPHPHIPM-FATCGIEKTVKLWAPMP 225 (316)
Q Consensus 188 ~~~~~-~~~~v~~~~~~p~~~~-l~s~~~d~~i~iwd~~~ 225 (316)
..... .......++|+|++++ +++-...+.|..++...
T Consensus 262 ~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 262 PLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp EEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred EEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCc
Confidence 32221 2235678999999995 55555678899887653
No 280
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.81 E-value=0.0092 Score=48.64 Aligned_cols=156 Identities=6% Similarity=-0.013 Sum_probs=95.3
Q ss_pred ceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCC-eEEEe--cC
Q 021160 36 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE-LLISY--ND 112 (316)
Q Consensus 36 ~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~s~--~d 112 (316)
....+++.+.+.+++++-...+.|.++++.... ...+..........+++.|.+. ++.+. ..
T Consensus 80 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~---------------~~~l~~~~~~~P~giavdp~~g~ly~td~~~~ 144 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL---------------RKVLFWQELDQPRAIALDPSSGFMYWTDWGEV 144 (318)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCS---------------CEEEECSSCSSEEEEEEEGGGTEEEEEECSSS
T ss_pred CccEEEEEcCCCeEEEEECCCCEEEEEECCCCc---------------EEEEEeCCCCCccEEEEeCCCCEEEEEecCCC
Confidence 355788887554666666677889999987432 1111122234567899998654 55553 25
Q ss_pred CcEEEEEcCCCCCCCCccCCccccccCCCccee-eCCcCCceeeeEEEecCCCcEEE-EeccCCeEEEEeccCCeeEEEe
Q 021160 113 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVY-SGHRNSQTVKGVNFFGPNDEYVM-SGSDCGHLFIWKKKGGKLVRLM 190 (316)
Q Consensus 113 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~l~-~~~~dg~v~~wd~~~~~~~~~~ 190 (316)
+.|...+++.. ....+ ...- .....+++ ++++..|+ +=+..+.|..+++........+
T Consensus 145 ~~I~r~~~dG~-----------------~~~~~~~~~l--~~Pnglav-d~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~ 204 (318)
T 3sov_A 145 PKIERAGMDGS-----------------SRFIIINSEI--YWPNGLTL-DYEEQKLYWADAKLNFIHKSNLDGTNRQAVV 204 (318)
T ss_dssp CEEEEEETTSC-----------------SCEEEECSSC--SCEEEEEE-ETTTTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred CEEEEEEcCCC-----------------CeEEEEECCC--CCccEEEE-eccCCEEEEEECCCCEEEEEcCCCCceEEEe
Confidence 78888887653 22223 2222 22688998 77655554 4456788999998743332222
Q ss_pred ecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC
Q 021160 191 VGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD 227 (316)
Q Consensus 191 ~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~ 227 (316)
.+.-.....+++.. +..+.+-...+.|..++..+++
T Consensus 205 ~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G~ 240 (318)
T 3sov_A 205 KGSLPHPFALTLFE-DILYWTDWSTHSILACNKYTGE 240 (318)
T ss_dssp CSCCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCC
T ss_pred cCCCCCceEEEEeC-CEEEEEecCCCeEEEEECCCCC
Confidence 32334566777753 3455566667889888886554
No 281
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.77 E-value=0.0059 Score=52.10 Aligned_cols=70 Identities=14% Similarity=0.180 Sum_probs=46.9
Q ss_pred EEEEEEcc-CCCeEEEe-cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcE-EEEec
Q 021160 95 ITGLAYSN-TSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEY-VMSGS 171 (316)
Q Consensus 95 i~~~~~~~-~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-l~~~~ 171 (316)
...++++| ++.++++. .++.|..++...+ .......... ......++| +|++++ +++-.
T Consensus 228 p~giavdp~~g~lyv~d~~~~~V~~~~~~~~----------------~~~~~~~~~~-~~~P~gia~-~pdG~~lyv~d~ 289 (430)
T 3tc9_A 228 CNGAETHPINGELYFNSWNAGQVFRYDFTTQ----------------ETTPLFTIQD-SGWEFHIQF-HPSGNYAYIVVV 289 (430)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEEETTTT----------------EEEEEEECSS-SSCCEEEEE-CTTSSEEEEEET
T ss_pred ceEEEEeCCCCEEEEEECCCCEEEEEECCCC----------------cEEEEEEcCC-CCcceeEEE-cCCCCEEEEEEC
Confidence 45788999 67777774 6889999998765 2211122111 122678998 999994 45556
Q ss_pred cCCeEEEEecc
Q 021160 172 DCGHLFIWKKK 182 (316)
Q Consensus 172 ~dg~v~~wd~~ 182 (316)
..+.|..++..
T Consensus 290 ~~~~I~~~~~d 300 (430)
T 3tc9_A 290 NQHYILRSDYD 300 (430)
T ss_dssp TTTEEEEEEEE
T ss_pred CCCEEEEEeCC
Confidence 68899998876
No 282
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.76 E-value=0.0044 Score=55.07 Aligned_cols=135 Identities=12% Similarity=0.054 Sum_probs=78.2
Q ss_pred CCC---cEEEEeccCCeEEEEeccCCeeEEEeecCc-------------cc-----------------------------
Q 021160 162 PND---EYVMSGSDCGHLFIWKKKGGKLVRLMVGDR-------------HV----------------------------- 196 (316)
Q Consensus 162 ~~~---~~l~~~~~dg~v~~wd~~~~~~~~~~~~~~-------------~~----------------------------- 196 (316)
.+| ..++.++.+|.++++|..+|+.+..+.... .+
T Consensus 331 ~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~G 410 (582)
T 1flg_A 331 KDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLG 410 (582)
T ss_dssp SSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTC
T ss_pred CCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCcc
Confidence 456 378889999999999999999887654321 00
Q ss_pred ---eEEEEEcCCCCeEEEEe---------------------------------CCCcEEEecCCCCCCC-CCCCCcccce
Q 021160 197 ---VNQLEPHPHIPMFATCG---------------------------------IEKTVKLWAPMPTDFP-PLPDNAEKIM 239 (316)
Q Consensus 197 ---v~~~~~~p~~~~l~s~~---------------------------------~d~~i~iwd~~~~~~~-~~~~~~~~~~ 239 (316)
-..++++|+...+.... .+|.|..||+.++++. +.+ ......
T Consensus 411 g~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~-~~~~~~ 489 (582)
T 1flg_A 411 GKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHK-EHLPLW 489 (582)
T ss_dssp SSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEE-ESSCCC
T ss_pred ccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEec-CCCCCc
Confidence 01345666655544322 2578889999887721 111 111111
Q ss_pred eeeecCCCCceeEEecCCCeEEEEEecccCcceeEEeeccccc--ccccCCCCeEEEEeccC
Q 021160 240 KANKQGREDHSRITLTPDVIMHVLRLQRRQTLAYRERRYNAAD--FESDEEEGETYLLGFSD 299 (316)
Q Consensus 240 ~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~ 299 (316)
... ....+.+++.++.|+.++.+|.++++.+-.... +.... -..-+.+|++|+.-.+.
T Consensus 490 ~g~-~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~-~~g~~a~P~~y~~~G~qYv~~~~G 549 (582)
T 1flg_A 490 AGV-LATAGNLVFTGTGDGYFKAFDAKSGKELWKFQT-GSGIVSPPITWEQDGEQYLGVTVG 549 (582)
T ss_dssp SCC-EEETTTEEEEECTTSEEEEEETTTCCEEEEEEC-SSCCCSCCEEEEETTEEEEEEEEC
T ss_pred ccc-eEeCCCEEEEECCCCcEEEEECCCCCEEEEecC-CCCcccCceEEEECCEEEEEEEcc
Confidence 100 112356777899999999999988855422222 11111 11123567777775543
No 283
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.73 E-value=0.015 Score=48.99 Aligned_cols=185 Identities=11% Similarity=0.019 Sum_probs=107.3
Q ss_pred cCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCC-eEEE-ecCCcEEEEEcCCCCCCCCccCC
Q 021160 55 SDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE-LLIS-YNDELVYLFEKNMGLGPSPLSLS 132 (316)
Q Consensus 55 ~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~s-~~d~~i~iwd~~~~~~~~~~~~~ 132 (316)
....|+..++...... .+ ......+..++|.+.+. ++.+ ...+.|+.+++.....
T Consensus 90 ~~~~I~~i~l~~~~~~---------------~~-~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~------- 146 (400)
T 3p5b_L 90 NRHEVRKMTLDRSEYT---------------SL-IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHG------- 146 (400)
T ss_dssp ETTEEEEECTTSCSCE---------------EE-ECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------------
T ss_pred ccceeEEEccCCccee---------------Ee-ccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCC-------
Confidence 3477888888755411 11 11235678999998655 5555 3678899999865300
Q ss_pred ccccccCCCcceeeCCcCCceeeeEEEecC-CCcEEEEeccCCeEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEE
Q 021160 133 PEDLQKREEPQVYSGHRNSQTVKGVNFFGP-NDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFAT 211 (316)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s 211 (316)
.......+..... ....+++ .+ .+.+.++-...+.|.+.++........+...-.....++++|.+..|..
T Consensus 147 -----~~~~~~~~~~~~~--~p~glav-D~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~ 218 (400)
T 3p5b_L 147 -----VSSYDTVISRDIQ--APDGLAV-DWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYW 218 (400)
T ss_dssp ------CCCEEEECSSCS--CEEEEEE-ETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEE
T ss_pred -----CCcceEEEeCCCC--CcccEEE-EecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEE
Confidence 0011222222222 2678888 65 5555666667889999998855444344433455789999996665444
Q ss_pred Ee-C-CCcEEEecCCCCCCCCCC-CCcccceeeeecCCCCceeEEecCCCeEEEEEecccCc
Q 021160 212 CG-I-EKTVKLWAPMPTDFPPLP-DNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQT 270 (316)
Q Consensus 212 ~~-~-d~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~~ 270 (316)
.. . .+.|...++.......+. ........++.-..++++.++-+....|...++.....
T Consensus 219 td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~ 280 (400)
T 3p5b_L 219 TDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR 280 (400)
T ss_dssp EECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCC
T ss_pred EeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCcc
Confidence 33 2 368888888765433221 11122333442223566777777778888888765433
No 284
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.72 E-value=0.0042 Score=53.04 Aligned_cols=113 Identities=11% Similarity=0.096 Sum_probs=69.5
Q ss_pred EEEEEEcc-CCCeEEEe-cCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEE-EEec
Q 021160 95 ITGLAYSN-TSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYV-MSGS 171 (316)
Q Consensus 95 i~~~~~~~-~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l-~~~~ 171 (316)
...+++.| +|.++++. .++.|+.+|..++ .....+...........+++ +|++++| ++-.
T Consensus 230 P~giavd~~~G~lyv~d~~~~~V~~~d~~~g----------------~~~~~~~~~~~~~~~~~ia~-dpdG~~LYvad~ 292 (433)
T 4hw6_A 230 AKTCAVHPQNGKIYYTRYHHAMISSYDPATG----------------TLTEEEVMMDTKGSNFHIVW-HPTGDWAYIIYN 292 (433)
T ss_dssp BCCCEECTTTCCEEECBTTCSEEEEECTTTC----------------CEEEEEEECSCCSSCEEEEE-CTTSSEEEEEET
T ss_pred CCEEEEeCCCCeEEEEECCCCEEEEEECCCC----------------eEEEEEeccCCCCCcccEEE-eCCCCEEEEEeC
Confidence 45688899 67777774 6788999998755 22112211111111346888 9999844 4555
Q ss_pred cCCeEEEEecc--CCee--EEEeecC---------------ccceEEEEE---------cCCCCeEEEEeCCCcEEEecC
Q 021160 172 DCGHLFIWKKK--GGKL--VRLMVGD---------------RHVVNQLEP---------HPHIPMFATCGIEKTVKLWAP 223 (316)
Q Consensus 172 ~dg~v~~wd~~--~~~~--~~~~~~~---------------~~~v~~~~~---------~p~~~~l~s~~~d~~i~iwd~ 223 (316)
..+.|+.+++. ++.. ...+.+. -.....+++ .+++.++++-...+.|+.++.
T Consensus 293 ~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~ 372 (433)
T 4hw6_A 293 GKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP 372 (433)
T ss_dssp TTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT
T ss_pred CCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC
Confidence 67889998865 3321 1122211 123567888 677777777667788998885
Q ss_pred C
Q 021160 224 M 224 (316)
Q Consensus 224 ~ 224 (316)
.
T Consensus 373 ~ 373 (433)
T 4hw6_A 373 E 373 (433)
T ss_dssp T
T ss_pred C
Confidence 3
No 285
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.64 E-value=0.017 Score=46.96 Aligned_cols=181 Identities=11% Similarity=0.015 Sum_probs=102.7
Q ss_pred CcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCC-eEEEe-cCCcEEEEEcCCCCCCCCccCCcc
Q 021160 57 EYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE-LLISY-NDELVYLFEKNMGLGPSPLSLSPE 134 (316)
Q Consensus 57 g~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~ 134 (316)
..|+..|+.+.+.. ..+ . .......++|.+.+. ++++. ..+.|+.+++......
T Consensus 10 ~~I~~i~~~~~~~~--------------~~~-~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~-------- 65 (316)
T 1ijq_A 10 HEVRKMTLDRSEYT--------------SLI-P-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV-------- 65 (316)
T ss_dssp SSEEEEETTSCCCE--------------EEE-C-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------------
T ss_pred CeEEEEECCCcceE--------------ehh-c-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCC--------
Confidence 56888898866421 111 1 134567899998664 55553 5789999998751000
Q ss_pred ccccCCCcceeeCCcCCceeeeEEEecCC-CcEEEEeccCCeEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEe
Q 021160 135 DLQKREEPQVYSGHRNSQTVKGVNFFGPN-DEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCG 213 (316)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~ 213 (316)
......+..... ....+++ .+. +.+.++-...+.|.++++........+...-.....++++|.+..|..+.
T Consensus 66 ----~~~~~~~~~~~~--~p~glav-d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d 138 (316)
T 1ijq_A 66 ----SSYDTVISRDIQ--APDGLAV-DWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTD 138 (316)
T ss_dssp ------CEEEECSSCS--CCCEEEE-ETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEE
T ss_pred ----cccEEEEeCCCC--CcCEEEE-eecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEc
Confidence 011112222222 2577887 654 45555556788999999875433333333335678999999666544333
Q ss_pred -CC-CcEEEecCCCCCCCCCC-CCcccceeeeecCC-CCceeEEecCCCeEEEEEecccC
Q 021160 214 -IE-KTVKLWAPMPTDFPPLP-DNAEKIMKANKQGR-EDHSRITLTPDVIMHVLRLQRRQ 269 (316)
Q Consensus 214 -~d-~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~s~~~d~~~~~w~~~~~~ 269 (316)
.. +.|...++.......+. ........++ +.+ ++++.++-+..+.|..+++....
T Consensus 139 ~~~~~~I~~~~~dG~~~~~~~~~~~~~P~gla-~d~~~~~lY~~D~~~~~I~~~d~dg~~ 197 (316)
T 1ijq_A 139 WGTPAKIKKGGLNGVDIYSLVTENIQWPNGIT-LDLLSGRLYWVDSKLHSISSIDVNGGN 197 (316)
T ss_dssp CSSSCEEEEEETTSCCEEEEECSSCSCEEEEE-EETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred cCCCCeEEEEcCCCCCeEEEEECCCCCceEEE-EeccCCEEEEEECCCCeEEEEecCCCc
Confidence 33 67888887654422221 1112223344 443 56677777777888888876543
No 286
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.64 E-value=0.0021 Score=57.03 Aligned_cols=54 Identities=7% Similarity=-0.103 Sum_probs=38.9
Q ss_pred CCeEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC
Q 021160 173 CGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD 227 (316)
Q Consensus 173 dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~ 227 (316)
+|.|..||+.+++.+..+.... .+....+...+..++.++.|+.|+.+|.++++
T Consensus 443 ~g~l~a~D~~tG~~~W~~~~~~-~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~ 496 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAKWTKWEKF-AAWGGTLYTKGGLVWYATLDGYLKALDNKDGK 496 (571)
T ss_dssp CEEEEEECTTTCCEEEEEEESS-CCCSBCEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred CCeEEEEECCCCCEEEEecCCC-CccceeEEECCCEEEEEcCCCeEEEEECCCCC
Confidence 5789999999999887775322 22222233345666778899999999999887
No 287
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.61 E-value=0.032 Score=51.36 Aligned_cols=164 Identities=11% Similarity=-0.010 Sum_probs=93.8
Q ss_pred cccEEEEEEccCCC-eEEE-ecCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCC-cEEE
Q 021160 92 NIHITGLAYSNTSE-LLIS-YNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPND-EYVM 168 (316)
Q Consensus 92 ~~~i~~~~~~~~~~-~l~s-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~l~ 168 (316)
...+..|+|.+... ++++ ...+.|+.+++..... .......+..... ....|++ .+.+ .+.+
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~------------~~~~~~vi~~~l~--~P~GLAv-D~~~~~LY~ 487 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHG------------VSSYDTVISRDIQ--APDGLAV-DWIHSNIYW 487 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------------------CEEEECSSCS--CCCEEEE-ETTTTEEEE
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCC------------CcceeEEEecCCC--Ccceeee-eecCCcEEE
Confidence 34577899998554 5555 3578899998865300 0011122222222 2677887 6655 4555
Q ss_pred EeccCCeEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEe-CC-CcEEEecCCCCCCCCCC-CCcccceeeeecC
Q 021160 169 SGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCG-IE-KTVKLWAPMPTDFPPLP-DNAEKIMKANKQG 245 (316)
Q Consensus 169 ~~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~-~d-~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~ 245 (316)
+-...+.|.+.++........+...-.....|+++|....|..+. .. +.|.+.++.......+. ........++.-.
T Consensus 488 tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~ 567 (791)
T 3m0c_C 488 TDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDL 567 (791)
T ss_dssp EETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEET
T ss_pred EecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEec
Confidence 556788999999975443333333345678999999755544433 23 67888888765532221 1112233344223
Q ss_pred CCCceeEEecCCCeEEEEEecccCc
Q 021160 246 REDHSRITLTPDVIMHVLRLQRRQT 270 (316)
Q Consensus 246 ~~~~~~~s~~~d~~~~~w~~~~~~~ 270 (316)
.+++++++-.....|...++.....
T Consensus 568 ~~~~LYwaD~~~~~I~~~d~dG~~~ 592 (791)
T 3m0c_C 568 LSGRLYWVDSKLHSISSIDVNGGNR 592 (791)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CCCeEEEEeCCCCcEEEEecCCCce
Confidence 4566777767777888888765433
No 288
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.55 E-value=0.0078 Score=51.94 Aligned_cols=162 Identities=15% Similarity=0.230 Sum_probs=93.7
Q ss_pred ceEEEEECCC-CCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEE-------ccCCC-e
Q 021160 36 RLNAIVIDPR-NPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAY-------SNTSE-L 106 (316)
Q Consensus 36 ~v~~~~~~~~-~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-------~~~~~-~ 106 (316)
....|+|+|. +.+++++-...+.|++.|+..+.+. .+. ............++| ++++. +
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~----------~l~--~~~~~~~~~p~~ia~~~~~~~~d~~G~~l 207 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLS----------SPL--NINTIPTNRIRSIAFNKKIEGYADEAEYM 207 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEE----------EEE--CCTTSSCSBEEEEEECCCBTTTBCTTCEE
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEE----------EEE--ccCccccCCCcEEEEeecccccCCCCCEE
Confidence 4578999984 4256666555577999999877632 111 010112345789999 99998 5
Q ss_pred EEEec-CC------cEEEEEcCC-CCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecC-CCcEEEEeccCCeEE
Q 021160 107 LISYN-DE------LVYLFEKNM-GLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGP-NDEYVMSGSDCGHLF 177 (316)
Q Consensus 107 l~s~~-d~------~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~dg~v~ 177 (316)
+++.. ++ .|.+++... +. +......+.+.... ....++. +| ++.++++-..++.|+
T Consensus 208 yvad~~~~~~~~~~~V~~i~r~~~G~-----------~~~~~~~~~v~~~~---~p~giav-dp~~g~LYvtd~~~g~V~ 272 (496)
T 3kya_A 208 IVAIDYDGKGDESPSVYIIKRNADGT-----------FDDRSDIQLIAAYK---QCNGATI-HPINGELYFNSYEKGQVF 272 (496)
T ss_dssp EEEECCCTTGGGEEEEEEEECCTTSC-----------CSTTSCEEEEEEES---CCCCEEE-CTTTCCEEEEETTTTEEE
T ss_pred EEEeCCCCCcccCceEEEEecCCCCc-----------eeecccceeeccCC---CceEEEE-cCCCCeEEEEECCCCEEE
Confidence 55543 31 266666433 10 00000001222111 1456777 77 556666677788999
Q ss_pred EEecc-------CCee-----------EEE-ee-cCccceEEEEEcCCCCe-EEEEeCCCcEEEecCC
Q 021160 178 IWKKK-------GGKL-----------VRL-MV-GDRHVVNQLEPHPHIPM-FATCGIEKTVKLWAPM 224 (316)
Q Consensus 178 ~wd~~-------~~~~-----------~~~-~~-~~~~~v~~~~~~p~~~~-l~s~~~d~~i~iwd~~ 224 (316)
.+|+. ++.. ... +. +.......++|+|+++. +++-.....|+.++..
T Consensus 273 r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 273 RLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp EECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred EEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 99997 5553 122 21 12345678999999995 4455566788886543
No 289
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.48 E-value=0.015 Score=47.51 Aligned_cols=154 Identities=12% Similarity=0.092 Sum_probs=89.5
Q ss_pred CccceEEEEECCCCCcEEEEEecCCcEEE-EeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEec
Q 021160 33 NSIRLNAIVIDPRNPNYFAVGGSDEYARV-YDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYN 111 (316)
Q Consensus 33 h~~~v~~~~~~~~~~~~l~~g~~dg~v~~-wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~ 111 (316)
+...+.++++.|++ .+++++. +|.+.. .|-. ++ .-..+.......+..+.+.+++.+++.+.
T Consensus 161 ~~~~~~~~~~~~~~-~~~~~g~-~G~~~~S~d~g-G~--------------tW~~~~~~~~~~~~~~~~~~~g~~~~~~~ 223 (327)
T 2xbg_A 161 AIGVMRNLNRSPSG-EYVAVSS-RGSFYSTWEPG-QT--------------AWEPHNRTTSRRLHNMGFTPDGRLWMIVN 223 (327)
T ss_dssp CCCCEEEEEECTTS-CEEEEET-TSSEEEEECTT-CS--------------SCEEEECCSSSCEEEEEECTTSCEEEEET
T ss_pred CCcceEEEEEcCCC-cEEEEEC-CCcEEEEeCCC-CC--------------ceeECCCCCCCccceeEECCCCCEEEEeC
Confidence 45578899999987 6666654 454433 3321 21 00001122345678899999998888888
Q ss_pred CCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCC--cCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCeeEEE
Q 021160 112 DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGH--RNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRL 189 (316)
Q Consensus 112 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~ 189 (316)
+|.+++.+.+.+ +....+... .....+.++.+ .+++..++++. +|.+ ++....|+.-..
T Consensus 224 ~G~~~~s~~D~G----------------~tW~~~~~~~~~~~~~~~~v~~-~~~~~~~~~g~-~g~i-~~S~DgG~tW~~ 284 (327)
T 2xbg_A 224 GGKIAFSDPDNS----------------ENWGELLSPLRRNSVGFLDLAY-RTPNEVWLAGG-AGAL-LCSQDGGQTWQQ 284 (327)
T ss_dssp TTEEEEEETTEE----------------EEECCCBCTTSSCCSCEEEEEE-SSSSCEEEEES-TTCE-EEESSTTSSCEE
T ss_pred CceEEEecCCCC----------------CeeEeccCCcccCCcceEEEEe-cCCCEEEEEeC-CCeE-EEeCCCCcccEE
Confidence 888877653322 111111111 11122788888 77777666655 6666 455555655444
Q ss_pred eec---CccceEEEEEcCCCCeEEEEeCCCcEEEecC
Q 021160 190 MVG---DRHVVNQLEPHPHIPMFATCGIEKTVKLWAP 223 (316)
Q Consensus 190 ~~~---~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~ 223 (316)
+.. ....+.++.|.+++. ++.++.+|.|.-++-
T Consensus 285 ~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 285 DVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYVT 320 (327)
T ss_dssp CGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEECC
T ss_pred cCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEcC
Confidence 432 235678888875544 556667898877664
No 290
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.48 E-value=0.003 Score=57.49 Aligned_cols=159 Identities=11% Similarity=0.014 Sum_probs=89.6
Q ss_pred cEEEEEEccCCC-eEEE-ecCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecC-CCcEEEEe
Q 021160 94 HITGLAYSNTSE-LLIS-YNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGP-NDEYVMSG 170 (316)
Q Consensus 94 ~i~~~~~~~~~~-~l~s-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~ 170 (316)
.+..++|.+.+. ++++ ...+.|+.+++...... ......+..... ....+++ .+ .+.++++-
T Consensus 407 ~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~------------~~~~~~i~~~~~--~P~glav-D~~~g~LY~tD 471 (699)
T 1n7d_A 407 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV------------SSYDTVISRDIQ--APDGLAV-DWIHSNIYWTD 471 (699)
T ss_dssp TCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-------------CCCCCBCCSCC----CCCEEC-CCSSSBCEECC
T ss_pred ceEEEccccccCeEEEEecCCCeEEEEecCCCCCC------------cceEEEEeCCCC--CcceEEE-EeeCCcEEEEe
Confidence 456788998665 4444 35788999998751000 011111211111 1456777 54 44555555
Q ss_pred ccCCeEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEe-CC-CcEEEecCCCCCCCCCC-CCcccceeeeecCC-
Q 021160 171 SDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCG-IE-KTVKLWAPMPTDFPPLP-DNAEKIMKANKQGR- 246 (316)
Q Consensus 171 ~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~-~d-~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~- 246 (316)
...+.|.++++........+.........++++|.+..|..+. .. +.|.+.++.......+. ........++ +.+
T Consensus 472 ~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGla-vd~~ 550 (699)
T 1n7d_A 472 SVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGIT-LDLL 550 (699)
T ss_dssp TTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEE-ECTT
T ss_pred ccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEE-Eecc
Confidence 5678899999875543333332234567889999655544333 22 67888887654432221 1112222344 444
Q ss_pred CCceeEEecCCCeEEEEEeccc
Q 021160 247 EDHSRITLTPDVIMHVLRLQRR 268 (316)
Q Consensus 247 ~~~~~~s~~~d~~~~~w~~~~~ 268 (316)
.++++++-+....|.++++...
T Consensus 551 ~~~LY~aD~~~~~I~~~d~dG~ 572 (699)
T 1n7d_A 551 SGRLYWVDSKLHSISSIDVNGG 572 (699)
T ss_dssp TCCEEEEETTTTEEEEECSSSS
T ss_pred CCEEEEEecCCCeEEEEccCCC
Confidence 5667778778888888887643
No 291
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.47 E-value=0.029 Score=45.29 Aligned_cols=164 Identities=10% Similarity=0.077 Sum_probs=87.2
Q ss_pred cceEEEEECCCCCcEEEEEecC-C-cEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEe-c
Q 021160 35 IRLNAIVIDPRNPNYFAVGGSD-E-YARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-N 111 (316)
Q Consensus 35 ~~v~~~~~~~~~~~~l~~g~~d-g-~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~ 111 (316)
.....+++.+++ +++++.... + .|..++..++++.. +. .. ........++..+.+..+++. .
T Consensus 72 ~~p~gia~~~dG-~l~vad~~~~~~~v~~~d~~~g~~~~----------~~--~~--~~~~~~~g~~~~~~~~~~v~d~~ 136 (306)
T 2p4o_A 72 GKVSGLAFTSNG-DLVATGWNADSIPVVSLVKSDGTVET----------LL--TL--PDAIFLNGITPLSDTQYLTADSY 136 (306)
T ss_dssp SEEEEEEECTTS-CEEEEEECTTSCEEEEEECTTSCEEE----------EE--EC--TTCSCEEEEEESSSSEEEEEETT
T ss_pred CCceeEEEcCCC-cEEEEeccCCcceEEEEcCCCCeEEE----------EE--eC--CCccccCcccccCCCcEEEEECC
Confidence 357899999998 665554332 2 46667776665211 00 00 011223344555555556664 5
Q ss_pred CCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEE-EEeccCCeEEEEeccC-Cee--E
Q 021160 112 DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYV-MSGSDCGHLFIWKKKG-GKL--V 187 (316)
Q Consensus 112 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l-~~~~~dg~v~~wd~~~-~~~--~ 187 (316)
++.|+.+|...+... ..... .................+ ++++.+| ++-...+.|..+++.. ++. .
T Consensus 137 ~g~i~~~d~~~~~~~------v~~~~--~~~~~~~~~~~~~~pngi---s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~ 205 (306)
T 2p4o_A 137 RGAIWLIDVVQPSGS------IWLEH--PMLARSNSESVFPAANGL---KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEP 205 (306)
T ss_dssp TTEEEEEETTTTEEE------EEEEC--GGGSCSSTTCCSCSEEEE---EEETTEEEEEETTTTEEEEEEBCTTSCBCCC
T ss_pred CCeEEEEeCCCCcEe------EEEEC--CccccccccCCCCcCCCc---CcCCCEEEEEeCCCCEEEEEEeCCCCCCCcc
Confidence 888888887643000 00000 000000000110113444 4566555 5556678999999874 332 1
Q ss_pred EEeecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCC
Q 021160 188 RLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMP 225 (316)
Q Consensus 188 ~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~ 225 (316)
..+.. ......++++++|+++++....+.|.+++...
T Consensus 206 ~~~~~-~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~G 242 (306)
T 2p4o_A 206 EIFVE-QTNIDDFAFDVEGNLYGATHIYNSVVRIAPDR 242 (306)
T ss_dssp EEEEE-SCCCSSEEEBTTCCEEEECBTTCCEEEECTTC
T ss_pred EEEec-cCCCCCeEECCCCCEEEEeCCCCeEEEECCCC
Confidence 12211 13456689999998877777778999999763
No 292
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.34 E-value=0.012 Score=52.49 Aligned_cols=55 Identities=9% Similarity=-0.060 Sum_probs=38.0
Q ss_pred cCCeEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC
Q 021160 172 DCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD 227 (316)
Q Consensus 172 ~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~ 227 (316)
..|.|.-||+.+++.+-..+... +...-.....+..++.++.|+.++.||.++++
T Consensus 451 ~~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~ 505 (599)
T 1w6s_A 451 GLGQIKAYNAITGDYKWEKMERF-AVWGGTMATAGDLVFYGTLDGYLKARDSDTGD 505 (599)
T ss_dssp CCEEEEEECTTTCCEEEEEEESS-CCCSBCEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred CcCeEEEEECCCCCEEeEecCCC-CccCcceEecCCEEEEECCCCeEEEEECCCCC
Confidence 35789999999999877664221 11111122245666778899999999999987
No 293
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.30 E-value=0.024 Score=47.52 Aligned_cols=134 Identities=9% Similarity=0.090 Sum_probs=79.5
Q ss_pred ceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCC-C--CCCCceecccccccCCCcccEEEEEEccCCC---eEE-
Q 021160 36 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPI-S--SDTPVDTFCPRHLIGKNNIHITGLAYSNTSE---LLI- 108 (316)
Q Consensus 36 ~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~l~- 108 (316)
.|..+..+|+| .+||..+. ..|.|-.+..+.....- . ..-..+.+...........+|..+.|+|-+. .|+
T Consensus 67 ~i~qlvlSpsG-~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVV 144 (452)
T 3pbp_A 67 DTFHVISSTSG-DLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVV 144 (452)
T ss_dssp TTCEEEECTTS-SEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEE
T ss_pred ceeEEEECCCC-CEEEEecC-CeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEE
Confidence 57789999999 78888755 68999999854321110 0 0011122322222112357899999999763 444
Q ss_pred EecCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEec--cCCeEEEEe
Q 021160 109 SYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGS--DCGHLFIWK 180 (316)
Q Consensus 109 s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~--~dg~v~~wd 180 (316)
-..|+.|++||+..... .+. ++++. ...|........+.+++| ..++-.|...+ +.|.|+-..
T Consensus 145 LtsD~~Ir~yDl~~s~~-~P~-----~L~k~--~~~fg~d~~~~ev~S~~F-g~~~lTLYvl~~t~~GDIYAlc 209 (452)
T 3pbp_A 145 LKEDDTITMFDILNSQE-KPI-----VLNKP--NNSFGLDARVNDITDLEF-SKDGLTLYCLNTTEGGDIFAFY 209 (452)
T ss_dssp EETTSCEEEEETTCTTS-CCE-----EESCC--CSEEESCSSCCCEEEEEE-CTTSSCEEEEECTTSCEEEEES
T ss_pred EecCCEEEEEEcccCCC-CCc-----chhcc--ccccCCCcccceEEEEEE-cCCCcEEEEEecCCCCCEEEEC
Confidence 47999999999987321 111 22211 112221111134899999 78877777744 889887655
No 294
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.26 E-value=0.013 Score=52.14 Aligned_cols=54 Identities=13% Similarity=-0.065 Sum_probs=38.6
Q ss_pred CCeEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC
Q 021160 173 CGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD 227 (316)
Q Consensus 173 dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~ 227 (316)
+|.|.-||+.+++.+-..+... .+..-.....+..++.++.|+.++.||.++++
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~ 518 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGK 518 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred cceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEECCCCC
Confidence 6889999999999887765432 22211122235677778999999999999887
No 295
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.22 E-value=0.058 Score=43.56 Aligned_cols=224 Identities=10% Similarity=0.041 Sum_probs=128.5
Q ss_pred eeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceec
Q 021160 3 LFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTF 82 (316)
Q Consensus 3 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~ 82 (316)
..|+|+|+.+++..+.+.. ...|.-..|-... .|+.-+ +..|.-|++.... .|++-|
T Consensus 87 ~~LQiFnletK~klks~~~------------~e~VvfWkWis~~--~L~lVT-~taVyHWs~~~~s--------~P~kvF 143 (365)
T 2xzh_A 87 KTLQIFNIEMKSKMKAHTM------------TDDVTFWKWISLN--TVALVT-DNAVYHWSMEGES--------QPVKMF 143 (365)
T ss_dssp TEEEEEETTTTEEEEEEEC------------SSCEEEEEECSSS--EEEEEE-SSEEEEEESSTTC--------CCEEEE
T ss_pred CeEEEechHHhhhhcceec------------CCccEEEEecCCC--eEEEEc-CCcEEEEcccCCC--------CCceee
Confidence 3577888877666555554 3467778886544 344433 3578889887532 455444
Q ss_pred ccccccCCCcccEEEEEEccCCCeEEE-e---c----CCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCcee
Q 021160 83 CPRHLIGKNNIHITGLAYSNTSELLIS-Y---N----DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTV 154 (316)
Q Consensus 83 ~~~~~~~~~~~~i~~~~~~~~~~~l~s-~---~----d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 154 (316)
.....+. ...|.....+++.++++. | . .|.+.+|..+.+ ..+.+.+|... .
T Consensus 144 dR~~~L~--~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-----------------~sQ~ieGhaa~--F 202 (365)
T 2xzh_A 144 DRHSSLA--GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-----------------VSQPIEGHAAS--F 202 (365)
T ss_dssp ECCGGGT--TCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-----------------EEEEECCSEEE--E
T ss_pred ecchhcc--cceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-----------------ccceeeeeeee--e
Confidence 3332222 356778888888884433 3 1 467889998875 66778888742 3
Q ss_pred eeEEEe--cCCCcEEEEecc---CCeEEEEeccCC---e------eEEEeec---CccceEEEEEcCCCCeEEEEeCCCc
Q 021160 155 KGVNFF--GPNDEYVMSGSD---CGHLFIWKKKGG---K------LVRLMVG---DRHVVNQLEPHPHIPMFATCGIEKT 217 (316)
Q Consensus 155 ~~~~~~--~~~~~~l~~~~~---dg~v~~wd~~~~---~------~~~~~~~---~~~~v~~~~~~p~~~~l~s~~~d~~ 217 (316)
..+... +....+++.+.. .+.+++.++... . .+..+.. -.+-..++..++.-..+..-..-|.
T Consensus 203 ~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ 282 (365)
T 2xzh_A 203 AQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGY 282 (365)
T ss_dssp EEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSE
T ss_pred EEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcE
Confidence 333220 111123333322 258888887432 1 1222211 2345667888887777777888899
Q ss_pred EEEecCCCCC-CCCCCCCcccceeeeecCCCCceeEEecCCCeEEEEEecccCcc
Q 021160 218 VKLWAPMPTD-FPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTL 271 (316)
Q Consensus 218 i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~~~ 271 (316)
|.+||++++. +..-+--.+.+...+ ...+..-++.....|.+.-..+.+.+..
T Consensus 283 ihlyDleTgt~i~~nrIS~d~iF~ta-~~~~~~Gi~~Vnr~GqVl~v~v~~~~iv 336 (365)
T 2xzh_A 283 IHLYDLETGTCIYMNRISGETIFVTA-PHEATAGIIGVNRKGQVLSVCVEEENII 336 (365)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEE-EEGGGTEEEEEETTCEEEEEEECTTTHH
T ss_pred EEEEEcccCcEEEEeccCCCceEEec-ccCCCCcEEEEcCCCEEEEEEECcccEe
Confidence 9999999987 222121223332222 2223345566667777666666665444
No 296
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.21 E-value=0.05 Score=42.55 Aligned_cols=167 Identities=13% Similarity=0.101 Sum_probs=96.2
Q ss_pred cceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCC-eEEEecCC
Q 021160 35 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE-LLISYNDE 113 (316)
Q Consensus 35 ~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~s~~d~ 113 (316)
...-.+++.+++ .++++.-.++.+.++++....... .+..................++|.|.++ ++++....
T Consensus 70 ~D~EGIa~~~~g-~~~vs~E~~~~l~~~~v~~~~~i~------~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~ 142 (255)
T 3qqz_A 70 KDLETIEYIGDN-QFVISDERDYAIYVISLTPNSEVK------ILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKN 142 (255)
T ss_dssp SSEEEEEECSTT-EEEEEETTTTEEEEEEECTTCCEE------EEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESS
T ss_pred CChHHeEEeCCC-EEEEEECCCCcEEEEEcCCCCeee------eeeeeccccccccccCCcceEEEeCCCCEEEEEECcC
Confidence 356788888877 666665567888898886543100 0011110000122355689999999986 44444333
Q ss_pred cEEEEEcCCCCCCCCccCCccccccCCCcceee-----CCcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCeeEE
Q 021160 114 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYS-----GHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVR 188 (316)
Q Consensus 114 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~ 188 (316)
...+|.+...... ..+..+. .......+.++++.+..+.+++.....+.+..+|.. |+.+.
T Consensus 143 p~~i~~~~g~~~~-------------~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~ 208 (255)
T 3qqz_A 143 PIEVYKVNGLLSS-------------NELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIG 208 (255)
T ss_dssp SEEEEEEESTTCS-------------SCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEE
T ss_pred CceEEEEcccccC-------------CceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEE
Confidence 3444444321000 0111110 001112278889866667778888888999999977 66666
Q ss_pred EeecCc---------cceEEEEEcCCCCeEEEEeCCCcEEEecC
Q 021160 189 LMVGDR---------HVVNQLEPHPHIPMFATCGIEKTVKLWAP 223 (316)
Q Consensus 189 ~~~~~~---------~~v~~~~~~p~~~~l~s~~~d~~i~iwd~ 223 (316)
.+.-.. ...-.|+|.|+|++.++ ++-..++.+..
T Consensus 209 ~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~~ 251 (255)
T 3qqz_A 209 EMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFTP 251 (255)
T ss_dssp EEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEEC
T ss_pred EEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEEe
Confidence 554221 25678999999986555 66666666653
No 297
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.16 E-value=0.025 Score=45.44 Aligned_cols=104 Identities=7% Similarity=0.001 Sum_probs=52.9
Q ss_pred CCcEEEEeccC-----CeEEEEeccCCeeEEE--eecCccceEEEEEcCCCCeEEEEeCC-----CcEEEecCCCCCCCC
Q 021160 163 NDEYVMSGSDC-----GHLFIWKKKGGKLVRL--MVGDRHVVNQLEPHPHIPMFATCGIE-----KTVKLWAPMPTDFPP 230 (316)
Q Consensus 163 ~~~~l~~~~~d-----g~v~~wd~~~~~~~~~--~~~~~~~v~~~~~~p~~~~l~s~~~d-----~~i~iwd~~~~~~~~ 230 (316)
++.+++.|+.+ ..+..||+.+.+-... ++........+.+ ++++++.|+.+ ..+.+||+.+.+...
T Consensus 159 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 236 (301)
T 2vpj_A 159 SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTT 236 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcEEE
Confidence 56777777654 4588999887654332 2211111122222 56677777654 468899998776222
Q ss_pred CCCCcccceeeeecCCCCceeEEecCC-----CeEEEEEeccc
Q 021160 231 LPDNAEKIMKANKQGREDHSRITLTPD-----VIMHVLRLQRR 268 (316)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~s~~~d-----~~~~~w~~~~~ 268 (316)
+.....+.........++.+++.++.+ ..+.++|+.+.
T Consensus 237 ~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 237 VTSMTTPRCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp ECCCSSCCBSCEEEEETTEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred CCCCCCcccceeEEEECCEEEEEcCcCCCcccccEEEEcCCCC
Confidence 221111111111112245566666544 34556665543
No 298
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.16 E-value=0.088 Score=44.34 Aligned_cols=223 Identities=11% Similarity=0.055 Sum_probs=131.1
Q ss_pred eeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceec
Q 021160 3 LFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTF 82 (316)
Q Consensus 3 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~ 82 (316)
.+|+|||+.+....+.+.. ...|.-..|-... .|+..+ +..|.-|++.... .|++-|
T Consensus 86 ~~lQiFnle~K~klks~~~------------~e~VvfWkWis~~--~l~lVT-~taVyHWsi~~~s--------~P~kvF 142 (494)
T 1bpo_A 86 KTLQIFNIEMKSKMKAHTM------------TDDVTFWKWISLN--TVALVT-DNAVYHWSMEGES--------QPVKMF 142 (494)
T ss_dssp TEEEEEETTTTEEEEEEEC------------SSCCCEEEEEETT--EEEEEC-SSEEEEEESSSSC--------CCEEEE
T ss_pred CeEEEEchHHhhhhcceec------------CCCceEEEecCCC--eEEEEc-CCeeEEecccCCC--------Cchhhe
Confidence 3678888877666555554 2356677776543 444443 3678899987532 455444
Q ss_pred ccccccCCCcccEEEEEEccCCCeEEE-e---c----CCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCcee
Q 021160 83 CPRHLIGKNNIHITGLAYSNTSELLIS-Y---N----DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTV 154 (316)
Q Consensus 83 ~~~~~~~~~~~~i~~~~~~~~~~~l~s-~---~----d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 154 (316)
....... ...|.....+++.++++. | . .|.+.+|..+.+ ..+.+.||... .
T Consensus 143 dR~~~L~--~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-----------------~sQ~ieGhaa~--F 201 (494)
T 1bpo_A 143 DRHSSLA--GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-----------------VSQPIEGHAAS--F 201 (494)
T ss_dssp ECCGGGT--TCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-----------------CEEEECCSEEE--E
T ss_pred ecchhcc--cceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-----------------ccchheeeeee--e
Confidence 3332222 356778888888884443 3 1 467889999875 66778888743 4
Q ss_pred eeEEEecCC---CcEEEEecc---CCeEEEEeccCC---------eeEEEee---cCccceEEEEEcCCCCeEEEEeCCC
Q 021160 155 KGVNFFGPN---DEYVMSGSD---CGHLFIWKKKGG---------KLVRLMV---GDRHVVNQLEPHPHIPMFATCGIEK 216 (316)
Q Consensus 155 ~~~~~~~~~---~~~l~~~~~---dg~v~~wd~~~~---------~~~~~~~---~~~~~v~~~~~~p~~~~l~s~~~d~ 216 (316)
..+.. +.+ ...++.+.. .+.+++.++... +.+..+. .-.+-..++..++.-..+..-..-|
T Consensus 202 ~~~~~-~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G 280 (494)
T 1bpo_A 202 AQFKM-EGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYG 280 (494)
T ss_dssp EEEEC-TTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTS
T ss_pred EEEec-CCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCc
Confidence 44433 111 123333333 378889887432 1111111 1234566788888877887888899
Q ss_pred cEEEecCCCCC-CCCCCCCcccceeeeecCCCCceeEEecCCCeEEEEEecccCcc
Q 021160 217 TVKLWAPMPTD-FPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTL 271 (316)
Q Consensus 217 ~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~~~ 271 (316)
.|.+||+.++. +..-+-..+.+...+ ...+..-++.....|.+.-..+.+.+..
T Consensus 281 ~i~lyDleTgt~i~~nrIs~~~iF~t~-~~~~~~Gi~~Vnr~GqVl~v~v~e~~iv 335 (494)
T 1bpo_A 281 YIHLYDLETGTCIYMNRISGETIFVTA-PHEATAGIIGVNRKGQVLSVCVEEENII 335 (494)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEE-EETTTTEEEEEETTCEEEEEEECTTTHH
T ss_pred eEEEEecccceeeeeecccCCceEEec-ccCCCCcEEEEccCceEEEEEEccccch
Confidence 99999999987 222111223332222 2333445666667777777766665444
No 299
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.09 E-value=0.023 Score=43.08 Aligned_cols=153 Identities=9% Similarity=0.002 Sum_probs=83.0
Q ss_pred ceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecc-cccccC-CCcccEEEEEEccCCCeEEEecCC
Q 021160 36 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFC-PRHLIG-KNNIHITGLAYSNTSELLISYNDE 113 (316)
Q Consensus 36 ~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~i~~~~~~~~~~~l~s~~d~ 113 (316)
.+..++|+|++ .+.++ .+|.+.-.+..+.+.. ..+. ...+-. +-. ...++.|.|+|.+.++ .||
T Consensus 42 ~~~~laf~P~G-~LYaV--~~G~Ly~~~~~t~~~~---------~W~~s~t~IG~~Gw~-~F~a~~fD~~G~LYav-~dG 107 (236)
T 1tl2_A 42 NFKFLFLSPGG-ELYGV--LNDKIYKGTPPTHDND---------NWMGRAKKIGNGGWN-QFQFLFFDPNGYLYAV-SKD 107 (236)
T ss_dssp TCSEEEECTTS-CEEEE--ETTEEEEESCCCSTTC---------CHHHHCEEEECSCGG-GCSEEEECTTSCEEEE-ETT
T ss_pred cceeEEECCCc-cEEEE--eCCeEEEECCCCCCcc---------cccccccEecccccc-cceEEEECCCCCEEEe-CCC
Confidence 67799999988 66666 6787666665443210 0000 000000 111 1478899999998888 779
Q ss_pred cEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCe------eE
Q 021160 114 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGK------LV 187 (316)
Q Consensus 114 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~------~~ 187 (316)
.|+-++..+... .+..-....-+....+.+..+.+ .|+|.+.+.. ++.++-....++. ..
T Consensus 108 ~iyr~~pP~~~~-----------~~Wl~~a~~vg~~gw~~~~~lff-~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~ 173 (236)
T 1tl2_A 108 KLYKASPPQSDT-----------DNWIARATEVGSGGWSGFKFLFF-HPNGYLYAVH--GQQFYKALPPVSNQDNWLARA 173 (236)
T ss_dssp EEEEESCCCSTT-----------CCHHHHSEEEECSSGGGEEEEEE-CTTSCEEEEE--TTEEEEECCCSSTTCCHHHHC
T ss_pred EEEEeCCCcCCC-----------CceeccccEeccCCCCceEEEEE-CCCceEEEEe--CCcEEecCCCCCCCccccccc
Confidence 988776532200 00000011112222234788888 9999877776 7776544333211 11
Q ss_pred EEee-cCccceEEEEEcCCCCeEEEEeCCCcE
Q 021160 188 RLMV-GDRHVVNQLEPHPHIPMFATCGIEKTV 218 (316)
Q Consensus 188 ~~~~-~~~~~v~~~~~~p~~~~l~s~~~d~~i 218 (316)
..+- ..-.....+.|.|++.+++.. ++.+
T Consensus 174 ~~~g~~g~~~yr~l~f~~~G~l~~v~--~g~~ 203 (236)
T 1tl2_A 174 TKIGQGGWDTFKFLFFSSVGTLFGVQ--GGKF 203 (236)
T ss_dssp EEEESSSGGGEEEEEECTTSCEEEEE--TTEE
T ss_pred ceeccCCcceEEEEEECCCCcEEEEe--CCeE
Confidence 1221 222345557799998876655 6643
No 300
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.08 E-value=0.09 Score=43.03 Aligned_cols=118 Identities=5% Similarity=0.101 Sum_probs=73.6
Q ss_pred cEEEEEE--ccC-CC--eEEEecCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEE
Q 021160 94 HITGLAY--SNT-SE--LLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVM 168 (316)
Q Consensus 94 ~i~~~~~--~~~-~~--~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~ 168 (316)
.+..+++ +|. ++ .+++..++.+..|++..... ...+.+.++.|.... . +..+.. .+....|+
T Consensus 129 ~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~---------g~~~~~lVR~f~lgs-q--~Egcvv-Dd~~g~Ly 195 (355)
T 3amr_A 129 EVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKN---------GYISGKKVRAFKMNS-Q--TEGMAA-DDEYGRLY 195 (355)
T ss_dssp SCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTT---------SCEEEEEEEEEECSS-C--EEEEEE-ETTTTEEE
T ss_pred CeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCC---------CcccceEEEEecCCC-C--cceEEE-cCCCCeEE
Confidence 3445666 664 44 34445789999998843100 001114556665443 2 677777 78888999
Q ss_pred EeccCCeEEEEecc-----CCeeEEEee-cC-ccceEEEEE--cCCCC-eEEEEe-CCCcEEEecCC
Q 021160 169 SGSDCGHLFIWKKK-----GGKLVRLMV-GD-RHVVNQLEP--HPHIP-MFATCG-IEKTVKLWAPM 224 (316)
Q Consensus 169 ~~~~dg~v~~wd~~-----~~~~~~~~~-~~-~~~v~~~~~--~p~~~-~l~s~~-~d~~i~iwd~~ 224 (316)
.+-++..|+.++.+ +++.+..+. ++ ...+..|++ .++++ +|+.++ .+.++.+||.+
T Consensus 196 v~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 196 IAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred EecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 99998888888855 345665553 22 236777877 45555 555444 67799999986
No 301
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.07 E-value=0.089 Score=42.91 Aligned_cols=189 Identities=8% Similarity=-0.052 Sum_probs=99.0
Q ss_pred ccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEecCC
Q 021160 34 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDE 113 (316)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d~ 113 (316)
.+.+..+.+.+++ ..++++ .++.|.. ..+.++ .-..+.......+..+++.+++.+++.+.++
T Consensus 121 ~~~~~~i~~~~~~-~~~~~~-~~g~v~~-S~DgG~--------------tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G 183 (327)
T 2xbg_A 121 PGSPRLIKALGNG-SAEMIT-NVGAIYR-TKDSGK--------------NWQALVQEAIGVMRNLNRSPSGEYVAVSSRG 183 (327)
T ss_dssp SSCEEEEEEEETT-EEEEEE-TTCCEEE-ESSTTS--------------SEEEEECSCCCCEEEEEECTTSCEEEEETTS
T ss_pred CCCeEEEEEECCC-CEEEEe-CCccEEE-EcCCCC--------------CCEEeecCCCcceEEEEEcCCCcEEEEECCC
Confidence 3457788877666 555555 4554422 122232 1111112334568899999998888887777
Q ss_pred cEEEEEcCCCCCCCCccCCccccccCCCcceee-CCcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCeeEEEeec
Q 021160 114 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYS-GHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVG 192 (316)
Q Consensus 114 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~ 192 (316)
.++.-+-..+ .....+. ... ..+..+.+ .+++..++. +.+|.+++.+...++.-..+..
T Consensus 184 ~~~~S~d~gG----------------~tW~~~~~~~~--~~~~~~~~-~~~g~~~~~-~~~G~~~~s~~D~G~tW~~~~~ 243 (327)
T 2xbg_A 184 SFYSTWEPGQ----------------TAWEPHNRTTS--RRLHNMGF-TPDGRLWMI-VNGGKIAFSDPDNSENWGELLS 243 (327)
T ss_dssp SEEEEECTTC----------------SSCEEEECCSS--SCEEEEEE-CTTSCEEEE-ETTTEEEEEETTEEEEECCCBC
T ss_pred cEEEEeCCCC----------------CceeECCCCCC--CccceeEE-CCCCCEEEE-eCCceEEEecCCCCCeeEeccC
Confidence 6655432112 1222222 222 23788888 788876544 4578877764332443222221
Q ss_pred ----CccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC-CCCCC---CCcccceeeeecCCCCceeEEecCCCeEEEE
Q 021160 193 ----DRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD-FPPLP---DNAEKIMKANKQGREDHSRITLTPDVIMHVL 263 (316)
Q Consensus 193 ----~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w 263 (316)
+...+..+++.|++..++.+. ++.|. +....++ ...+. .....++.+. +.. +..++.++.+|.+.-+
T Consensus 244 ~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i~-~S~DgG~tW~~~~~~~~~~~~~~~v~-~~~-~~~~~~~G~~G~i~~~ 318 (327)
T 2xbg_A 244 PLRRNSVGFLDLAYRTPNEVWLAGG-AGALL-CSQDGGQTWQQDVDVKKVPSNFYKIL-FFS-PDQGFILGQKGILLRY 318 (327)
T ss_dssp TTSSCCSCEEEEEESSSSCEEEEES-TTCEE-EESSTTSSCEECGGGTTSSSCCCEEE-EEE-TTEEEEECSTTEEEEE
T ss_pred CcccCCcceEEEEecCCCEEEEEeC-CCeEE-EeCCCCcccEEcCccCCCCCCeEEEE-EEC-CCceEEEcCCceEEEE
Confidence 223578899998877666654 67663 3444443 22221 1122333333 222 3346666677755544
No 302
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.06 E-value=0.12 Score=46.30 Aligned_cols=157 Identities=6% Similarity=-0.022 Sum_probs=91.4
Q ss_pred cceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCC-CeEEEe--c
Q 021160 35 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTS-ELLISY--N 111 (316)
Q Consensus 35 ~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~s~--~ 111 (316)
.....+++++.+.+++++-...+.|.+.++..... ..+....-.....|++.|.+ .++++- .
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~---------------~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~ 148 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR---------------KVLFWQELDQPRAIALDPSSGFMYWTDWGE 148 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC---------------EEEECSSCSCCCCEEEETTTTEEEEEECSS
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCE---------------EEEEeCCCCCCceEEEecCCCeEEEeccCC
Confidence 35788999986646777767789999999875431 11111222345688998875 455663 2
Q ss_pred CCcEEEEEcCCCCCCCCccCCccccccCCCcceee-CCcCCceeeeEEEecCCCcEEEE-eccCCeEEEEeccCCeeEEE
Q 021160 112 DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYS-GHRNSQTVKGVNFFGPNDEYVMS-GSDCGHLFIWKKKGGKLVRL 189 (316)
Q Consensus 112 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~l~~-~~~dg~v~~wd~~~~~~~~~ 189 (316)
...|...+++.. ....+. ... .....+++ ++++..|+. -...+.|..+++........
T Consensus 149 ~~~I~r~~~dG~-----------------~~~~l~~~~~--~~P~Glal-d~~~~~LY~aD~~~~~I~~~~~dG~~~~~~ 208 (619)
T 3s94_A 149 VPKIERAGMDGS-----------------SRFIIINSEI--YWPNGLTL-DYEEQKLYWADAKLNFIHKSNLDGTNRQAV 208 (619)
T ss_dssp SCEEEEEETTSC-----------------SCEEEECSSC--SSEEEEEE-ETTTTEEEEEETTTCCEEEESSSCCEEC--
T ss_pred CCEEEEEECCCC-----------------ceEEEEeCCC--CCCcEEEE-EccCCEEEEEeCCCCeEEEecCCCCccEEE
Confidence 467777777654 222232 222 23788998 776555544 45577899998875443322
Q ss_pred eecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC
Q 021160 190 MVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD 227 (316)
Q Consensus 190 ~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~ 227 (316)
..+.-.....+++..+ ..+.+-...+.|...|..+++
T Consensus 209 ~~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~ 245 (619)
T 3s94_A 209 VKGSLPHPFALTLFED-ILYWTDWSTHSILACNKYTGE 245 (619)
T ss_dssp -------CCCEEESSS-EEEEECTTTCSEEEEESSSCC
T ss_pred EeCCCCCceEEEEeCC-EEEEecCCCCEEEEEECCCCc
Confidence 2212223345667655 445555566778888876553
No 303
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.99 E-value=0.081 Score=43.61 Aligned_cols=164 Identities=9% Similarity=0.062 Sum_probs=91.0
Q ss_pred ceEEEEECCCCCcEEEEE------------ecCCcEEEEeCcCCcccCCCCCCCCceecccccc-cCCCcccEEEEEEcc
Q 021160 36 RLNAIVIDPRNPNYFAVG------------GSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHL-IGKNNIHITGLAYSN 102 (316)
Q Consensus 36 ~v~~~~~~~~~~~~l~~g------------~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~ 102 (316)
..-.+.+.|+| ..++++ ..+|.|.++|+.+... ....+..... .....-....+.+.+
T Consensus 51 G~EDi~~~~~G-~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~--------~~~~l~~~g~~~~~~~f~PhGi~~~~ 121 (355)
T 3sre_A 51 GSEDLEILPNG-LAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEP--------AVSELEIIGNTLDISSFNPHGISTFI 121 (355)
T ss_dssp CCCEEEECTTS-EEEEEECCC-----------CCEEEEEETTSSSC--------CEEECEEECSSCCGGGCCEEEEEEEE
T ss_pred CcceeEEcCCC-eEEEEeccccCCCcccCCCCCCeEEEEecCCCCC--------ceEEEEccCCCCCcCceeeeeeEEEE
Confidence 34567788877 444443 1689999999874320 0111111110 011223455666655
Q ss_pred --CCC--eEEEe-c--CCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEec----
Q 021160 103 --TSE--LLISY-N--DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGS---- 171 (316)
Q Consensus 103 --~~~--~l~s~-~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~---- 171 (316)
+++ +++.. . +.+|.+|+++.... ....+..+.+.. ....+++.+ .++|.+.++..
T Consensus 122 d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~------------~~~~~~~~~g~~-~~~pND~~v-~~~G~fyvt~~~~ft 187 (355)
T 3sre_A 122 DDDNTVYLLVVNHPGSSSTVEVFKFQEEEK------------SLLHLKTIRHKL-LPSVNDIVA-VGPEHFYATNDHYFI 187 (355)
T ss_dssp CTTCCEEEEEEECSTTCCEEEEEEEETTTT------------EEEEEEEECCTT-CSSEEEEEE-EETTEEEEEESCSCS
T ss_pred CCCCcEEEEEEECCCCCCeEEEEEEECCCC------------EEEEEeccccCC-CCCCceEEE-eCCCCEEecCCcEeC
Confidence 454 44442 2 56788888765310 001223343322 134788888 78888777654
Q ss_pred -------------cCCeEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEE-eCCCcEEEecCCC
Q 021160 172 -------------DCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATC-GIEKTVKLWAPMP 225 (316)
Q Consensus 172 -------------~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~-~~d~~i~iwd~~~ 225 (316)
..|.|+.++. ++. ..+...-...+.++|+|+++.|..+ +..+.|..|++..
T Consensus 188 d~~~~~~e~~~~~~~g~vyr~d~--~~~-~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 188 DPYLKSWEMHLGLAWSFVTYYSP--NDV-RVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp SHHHHHHHHHTTCCCEEEEEECT--TCC-EEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred CcccccchhhccCCccEEEEEEC--CeE-EEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 1345666665 332 2222223457889999999885544 5678899999864
No 304
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.95 E-value=0.16 Score=43.82 Aligned_cols=123 Identities=11% Similarity=0.087 Sum_probs=64.8
Q ss_pred EEEEEEccCC-CeEEEe-cCCcEEEEEcC-------CCCCCCCccCCccccccCCCc-ceeeCCcCCceeeeEEEecCCC
Q 021160 95 ITGLAYSNTS-ELLISY-NDELVYLFEKN-------MGLGPSPLSLSPEDLQKREEP-QVYSGHRNSQTVKGVNFFGPND 164 (316)
Q Consensus 95 i~~~~~~~~~-~~l~s~-~d~~i~iwd~~-------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~ 164 (316)
...++++|++ .++++. .++.|+.+|+. ++....+.. ... . ... ..+.. ........++| +|++
T Consensus 249 p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~--~~~--~-g~~~~l~~~-~~~~~p~~ia~-~p~G 321 (496)
T 3kya_A 249 CNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIV--KNN--P-NTFKQLFTI-ADPSWEFQIFI-HPTG 321 (496)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBG--GGC--T-TTEEEEEEC-SSSSCCEEEEE-CTTS
T ss_pred ceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccc--ccc--c-cccceeEec-CCCCCceEEEE-cCCC
Confidence 4577889954 566664 68889999997 441000000 000 0 000 11211 11122578999 9999
Q ss_pred cEE-EEeccCCeEEEEecc--CCee--EEEeecC---c------------cceE-EEEEc-------CCCCeEEEEeCCC
Q 021160 165 EYV-MSGSDCGHLFIWKKK--GGKL--VRLMVGD---R------------HVVN-QLEPH-------PHIPMFATCGIEK 216 (316)
Q Consensus 165 ~~l-~~~~~dg~v~~wd~~--~~~~--~~~~~~~---~------------~~v~-~~~~~-------p~~~~l~s~~~d~ 216 (316)
++| ++-+....|+.++.. .+.. ...+.+. . .... .++.. +++.++++-....
T Consensus 322 ~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~ 401 (496)
T 3kya_A 322 KYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNF 401 (496)
T ss_dssp SEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGT
T ss_pred CEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCC
Confidence 954 444667889986654 3332 1222221 0 1233 34444 4556666666677
Q ss_pred cEEEecCC
Q 021160 217 TVKLWAPM 224 (316)
Q Consensus 217 ~i~iwd~~ 224 (316)
.|+.++..
T Consensus 402 rIr~i~~~ 409 (496)
T 3kya_A 402 CVRKVTPE 409 (496)
T ss_dssp EEEEECTT
T ss_pred EEEEEeCC
Confidence 88888843
No 305
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.88 E-value=0.1 Score=41.72 Aligned_cols=104 Identities=13% Similarity=0.082 Sum_probs=54.4
Q ss_pred CCcEEEEeccC-----CeEEEEeccCCeeE--EEeecCccceEEEEEcCCCCeEEEEeCC-----CcEEEecCCCCCCCC
Q 021160 163 NDEYVMSGSDC-----GHLFIWKKKGGKLV--RLMVGDRHVVNQLEPHPHIPMFATCGIE-----KTVKLWAPMPTDFPP 230 (316)
Q Consensus 163 ~~~~l~~~~~d-----g~v~~wd~~~~~~~--~~~~~~~~~v~~~~~~p~~~~l~s~~~d-----~~i~iwd~~~~~~~~ 230 (316)
++.+++.|+.+ ..+.+||+.+.+-. ..+......-..+.+ ++++++.|+.+ ..+.+||+.+.+...
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 189 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTN 189 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEe
Confidence 56777777643 36889998876533 222221111122222 56677777654 468899988776222
Q ss_pred CCCCcccceeeeecCCCCceeEEecCC-----CeEEEEEeccc
Q 021160 231 LPDNAEKIMKANKQGREDHSRITLTPD-----VIMHVLRLQRR 268 (316)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~s~~~d-----~~~~~w~~~~~ 268 (316)
+.....+.........++.+++.++.+ ..+.++|+.+.
T Consensus 190 ~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 232 (301)
T 2vpj_A 190 VTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTD 232 (301)
T ss_dssp ECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred CCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCC
Confidence 211111111111112245666666653 45777777654
No 306
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.88 E-value=0.058 Score=43.40 Aligned_cols=185 Identities=12% Similarity=0.108 Sum_probs=89.7
Q ss_pred cEEEEEecC----CcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEE-ecC------CcEE
Q 021160 48 NYFAVGGSD----EYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLIS-YND------ELVY 116 (316)
Q Consensus 48 ~~l~~g~~d----g~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s-~~d------~~i~ 116 (316)
.+++.|+.+ ..+.+||+.+.++..... +... ......+.+ ++++++. +.+ ..+.
T Consensus 57 ~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~------------~p~~-r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~ 121 (306)
T 3ii7_A 57 VVYILGGSQLFPIKRMDCYNVVKDSWYSKLG------------PPTP-RDSLAACAA--EGKIYTSGGSEVGNSALYLFE 121 (306)
T ss_dssp EEEEECCBSSSBCCEEEEEETTTTEEEEEEC------------CSSC-CBSCEEEEE--TTEEEEECCBBTTBSCCCCEE
T ss_pred EEEEEeCCCCCCcceEEEEeCCCCeEEECCC------------CCcc-ccceeEEEE--CCEEEEECCCCCCCcEeeeEE
Confidence 677888755 668889998876532210 1011 111112222 5565555 433 3588
Q ss_pred EEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEecc---------CCeEEEEeccCCeeE
Q 021160 117 LFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSD---------CGHLFIWKKKGGKLV 187 (316)
Q Consensus 117 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~---------dg~v~~wd~~~~~~~ 187 (316)
+||..+.. ...+........-.+++. .++.+++.|+. -..+.+||+.+.+-.
T Consensus 122 ~~d~~~~~-----------------W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~ 182 (306)
T 3ii7_A 122 CYDTRTES-----------------WHTKPSMLTQRCSHGMVE--ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWT 182 (306)
T ss_dssp EEETTTTE-----------------EEEECCCSSCCBSCEEEE--ETTEEEEECCEESCTTTCEECCCEEEEETTTTEEE
T ss_pred EEeCCCCc-----------------eEeCCCCcCCcceeEEEE--ECCEEEEECCCCCCCCcccccceEEEeCCCCCeEE
Confidence 88887651 111111111111112222 25666677654 345889998877533
Q ss_pred EE--eecCccceEEEEEcCCCCeEEEEeCC-----CcEEEecCCCCCCCCCCCCcccceeeeecCCCCceeEEecCC---
Q 021160 188 RL--MVGDRHVVNQLEPHPHIPMFATCGIE-----KTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLTPD--- 257 (316)
Q Consensus 188 ~~--~~~~~~~v~~~~~~p~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d--- 257 (316)
.. +......- +++.. ++++++.|+.+ ..+.+||+.+.+...+.....+.........++.+++.++.+
T Consensus 183 ~~~~~p~~r~~~-~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~ 260 (306)
T 3ii7_A 183 ELCPMIEARKNH-GLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAVGSIVYVLAGFQGVG 260 (306)
T ss_dssp EECCCSSCCBSC-EEEEE-TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEETTEEEEEECBCSSS
T ss_pred ECCCccchhhcc-eEEEE-CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEECCEEEEEeCcCCCe
Confidence 22 21111111 22222 56677776643 368899998876222221111111111111255677776643
Q ss_pred --CeEEEEEeccc
Q 021160 258 --VIMHVLRLQRR 268 (316)
Q Consensus 258 --~~~~~w~~~~~ 268 (316)
..+.++|+.+.
T Consensus 261 ~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 261 RLGHILEYNTETD 273 (306)
T ss_dssp BCCEEEEEETTTT
T ss_pred eeeeEEEEcCCCC
Confidence 45667776554
No 307
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.75 E-value=0.12 Score=43.32 Aligned_cols=108 Identities=8% Similarity=0.060 Sum_probs=74.3
Q ss_pred EccCCCeEEEecCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCc--CCceeeeEEEecCCCcEEEEeccCCeEE
Q 021160 100 YSNTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHR--NSQTVKGVNFFGPNDEYVMSGSDCGHLF 177 (316)
Q Consensus 100 ~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~l~~~~~dg~v~ 177 (316)
...+|.-++...++.|+.-++... ...+.+.... ....+..+.. +|+|.+||..+ +..|.
T Consensus 28 ~~~n~t~i~~a~~n~iR~~~i~~~----------------~~Yk~L~~~~~i~f~~i~qlvl-SpsG~lLAl~g-~~~V~ 89 (452)
T 3pbp_A 28 SSQNGTRIVFIQDNIIRWYNVLTD----------------SLYHSLNFSRHLVLDDTFHVIS-STSGDLLCLFN-DNEIF 89 (452)
T ss_dssp EETTTTEEEEEETTEEEEEETTTC----------------SSCEEEECTTTCCCCTTCEEEE-CTTSSEEEEEC-SSEEE
T ss_pred EEcCCCEEEEEECCEEEEEECCCC----------------CcceEEecCcccccCceeEEEE-CCCCCEEEEec-CCeEE
Confidence 345667777777888998888754 2334444331 1122777887 99999999886 45788
Q ss_pred EEeccCCe------------eEEEeec------CccceEEEEEcCCC---CeEEEEeCCCcEEEecCCC
Q 021160 178 IWKKKGGK------------LVRLMVG------DRHVVNQLEPHPHI---PMFATCGIEKTVKLWAPMP 225 (316)
Q Consensus 178 ~wd~~~~~------------~~~~~~~------~~~~v~~~~~~p~~---~~l~s~~~d~~i~iwd~~~ 225 (316)
+..+..+. ..+.+.- ...+|..+.|||-+ ..|++-..|+.||+||+..
T Consensus 90 Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 90 VMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILN 158 (452)
T ss_dssp EEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTC
T ss_pred EEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEccc
Confidence 88876321 1122321 24679999999954 5788889999999999986
No 308
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.73 E-value=0.15 Score=49.56 Aligned_cols=227 Identities=11% Similarity=0.049 Sum_probs=125.1
Q ss_pred eeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceec
Q 021160 3 LFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTF 82 (316)
Q Consensus 3 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~ 82 (316)
.+|+|||+.+....+.+.. +.+|.-..|-... .|+..+ +..|..|++.... .|++-|
T Consensus 86 ~~lQiFnl~~k~klks~~~------------~e~VvfWkWis~~--~l~lVT-~~aVyHW~~~~~s--------~P~k~f 142 (1630)
T 1xi4_A 86 KTLQIFNIEMKSKMKAHTM------------TDDVTFWKWISLN--TVALVT-DNAVYHWSMEGES--------QPVKMF 142 (1630)
T ss_pred CeEEEeehHHhhhhccccc------------CCCceEEEecCCC--eeEEEc-CCeEEEeccCCCC--------ccHHHH
Confidence 3567777766655555444 3467778886544 344333 3579999996432 333333
Q ss_pred ccccccCCCcccEEEEEEccCCCeEEE-e-c------CCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCcee
Q 021160 83 CPRHLIGKNNIHITGLAYSNTSELLIS-Y-N------DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTV 154 (316)
Q Consensus 83 ~~~~~~~~~~~~i~~~~~~~~~~~l~s-~-~------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 154 (316)
....... ...|.....+++.++++. | + .|.+.+|..+.+ ..+.+.||... .
T Consensus 143 dR~~~L~--~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~-----------------~sQ~iegha~~--F 201 (1630)
T 1xi4_A 143 DRHSSLA--GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-----------------VSQPIEGHAAS--F 201 (1630)
T ss_pred hcchhcc--cCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc-----------------cchhhhHhHhh--h
Confidence 2222111 356777788888884443 3 1 577889998875 45556666532 2
Q ss_pred eeEEEe--cCCCcEEEEecc---CCeEEEEeccCC---ee------EEEe-e--cCccceEEEEEcCCCCeEEEEeCCCc
Q 021160 155 KGVNFF--GPNDEYVMSGSD---CGHLFIWKKKGG---KL------VRLM-V--GDRHVVNQLEPHPHIPMFATCGIEKT 217 (316)
Q Consensus 155 ~~~~~~--~~~~~~l~~~~~---dg~v~~wd~~~~---~~------~~~~-~--~~~~~v~~~~~~p~~~~l~s~~~d~~ 217 (316)
..+... ++....++.+.. .+.+++-++... .. +..+ + .-.+...++..++.-..+..-+.-|.
T Consensus 202 ~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~ 281 (1630)
T 1xi4_A 202 AQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGY 281 (1630)
T ss_pred heeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCce
Confidence 222220 111122222211 367888887432 11 1111 1 11234456777777777777778899
Q ss_pred EEEecCCCCC-CCCCCCCcccceeeeecCCCCceeEEecCCCeEEEEEecccCcceeE
Q 021160 218 VKLWAPMPTD-FPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTLAYR 274 (316)
Q Consensus 218 i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~~~~~~~ 274 (316)
|.+||+.++. +..-+-....+...+ ......-++.....|.|.-..+.+.+...|.
T Consensus 282 ~~~~d~~t~~~i~~~ris~~~iF~~~-~~~~~~g~~~vnr~G~vl~v~v~~~~iv~yi 338 (1630)
T 1xi4_A 282 IHLYDLETGTCIYMNRISGETIFVTA-PHEATAGIIGVNRKGQVLSVCVEEENIIPYI 338 (1630)
T ss_pred EEEEecccchhhhhccccCCceEEec-cCCCCCceEEEcCCceEEEEEEccchhhhhH
Confidence 9999999987 322222333343333 2333445666667777777776665554443
No 309
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.68 E-value=0.075 Score=42.63 Aligned_cols=63 Identities=13% Similarity=0.145 Sum_probs=36.7
Q ss_pred CCcEEEEecc-------CCeEEEEeccCCeeEEE--eecCccceEEEEEcCCCCeEEEEeCC-----CcEEEecCCCCC
Q 021160 163 NDEYVMSGSD-------CGHLFIWKKKGGKLVRL--MVGDRHVVNQLEPHPHIPMFATCGIE-----KTVKLWAPMPTD 227 (316)
Q Consensus 163 ~~~~l~~~~~-------dg~v~~wd~~~~~~~~~--~~~~~~~v~~~~~~p~~~~l~s~~~d-----~~i~iwd~~~~~ 227 (316)
++.+++.|+. -..+..||+.+.+-... ++........+.+ ++++++.|+.+ ..+.+||+.+.+
T Consensus 155 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 231 (302)
T 2xn4_A 155 GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNA 231 (302)
T ss_dssp TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTE
T ss_pred CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCC
Confidence 5667777654 23588999887653322 2211112222222 56677777654 368899998775
No 310
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.67 E-value=0.12 Score=41.70 Aligned_cols=63 Identities=13% Similarity=0.037 Sum_probs=37.4
Q ss_pred CCcEEEEeccC-----CeEEEEeccCCeeEEE--eecCccceEEEEEcCCCCeEEEEeCC-----CcEEEecCCCCC
Q 021160 163 NDEYVMSGSDC-----GHLFIWKKKGGKLVRL--MVGDRHVVNQLEPHPHIPMFATCGIE-----KTVKLWAPMPTD 227 (316)
Q Consensus 163 ~~~~l~~~~~d-----g~v~~wd~~~~~~~~~--~~~~~~~v~~~~~~p~~~~l~s~~~d-----~~i~iwd~~~~~ 227 (316)
++.+++.|+.+ ..+..||+.+.+-... +.........+.+ ++++++.|+.+ ..+.+||+.+.+
T Consensus 168 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 242 (308)
T 1zgk_A 168 NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETET 242 (308)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCc
Confidence 56777777654 4588999887653221 2211112222223 56677777654 468999998876
No 311
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.65 E-value=0.056 Score=43.83 Aligned_cols=156 Identities=8% Similarity=0.053 Sum_probs=97.5
Q ss_pred EEEEEEccC-CCeEEEe-cCCcEEEEEcCCCCCCCCccCCccccccCCCcc-eeeC----CcCCceeeeEEEe--cCCCc
Q 021160 95 ITGLAYSNT-SELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQ-VYSG----HRNSQTVKGVNFF--GPNDE 165 (316)
Q Consensus 95 i~~~~~~~~-~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~i~~~~~~--~~~~~ 165 (316)
-.+++|.+. +.++++. ..++|..||...+ .... .+.+ ......+..+.+. .|+++
T Consensus 15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~----------------~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~gr 78 (334)
T 2p9w_A 15 PEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQ----------------SHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKR 78 (334)
T ss_dssp CSCEEEETTTTEEEEEETTTTEEEEECTTTC----------------CEEEECCTTTCCSSCCSEEEEEEEESSSSSCCE
T ss_pred CcCccCcCCCCEEEEEeccCCEEEEEcCCCC----------------eEEEEecCCccccCCCcceeeEEEEeccCCCCc
Confidence 347889875 4566776 6999999998754 1111 1221 1111125778872 36777
Q ss_pred EEEEec-------------cCCeEEEEecc---CCeeEEEee--cC-----------ccceEEEEEcCCCCeEEEEeCC-
Q 021160 166 YVMSGS-------------DCGHLFIWKKK---GGKLVRLMV--GD-----------RHVVNQLEPHPHIPMFATCGIE- 215 (316)
Q Consensus 166 ~l~~~~-------------~dg~v~~wd~~---~~~~~~~~~--~~-----------~~~v~~~~~~p~~~~l~s~~~d- 215 (316)
++++.. .+..|..||+. +++.+.... .. ......++..++|+..++++.-
T Consensus 79 L~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~ 158 (334)
T 2p9w_A 79 LFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGM 158 (334)
T ss_dssp EEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESS
T ss_pred EEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCC
Confidence 777543 26789999999 787765543 11 1247899999999999988877
Q ss_pred CcEEEecCCCCCCCCC----C-CCcc-cceeeeecCCCCceeEEecCCCeEEEEEecc
Q 021160 216 KTVKLWAPMPTDFPPL----P-DNAE-KIMKANKQGREDHSRITLTPDVIMHVLRLQR 267 (316)
Q Consensus 216 ~~i~iwd~~~~~~~~~----~-~~~~-~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~ 267 (316)
+.|...+........+ + .... ....++ +.+++..|+.....+.+..+|+.+
T Consensus 159 ~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv-~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 159 PAIARVSADGKTVSTFAWESGNGGQRPGYSGIT-FDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp CEEEEECTTSCCEEEEEECCCCSSSCCSCSEEE-EETTTTEEEEESSSSSEEEEECSS
T ss_pred CeEEEEeCCCCEEeeeeecCCCcccccCcceEE-EeCCCCEEEEEcCCCeEEEEcCCC
Confidence 7777777765532111 0 0111 111233 667777776666699999998774
No 312
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.58 E-value=0.11 Score=49.98 Aligned_cols=176 Identities=10% Similarity=0.093 Sum_probs=103.0
Q ss_pred eeeEEEEeeCCCcceEEEeccccccccCCCCccceEEEE---ECCCCCcEEEEEe----------cCCcEEEEeCcCCcc
Q 021160 3 LFNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIV---IDPRNPNYFAVGG----------SDEYARVYDIRKCHW 69 (316)
Q Consensus 3 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~---~~~~~~~~l~~g~----------~dg~v~~wd~~~~~~ 69 (316)
+.|++.|..+.+....+.....+ .+.+++ |..+...++++|+ ..|.|.+|++..+++
T Consensus 807 s~i~lidp~t~~~i~~~~l~~nE----------~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL 876 (1158)
T 3ei3_A 807 HNLLIIDQHTFEVLHAHQFLQNE----------YALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKL 876 (1158)
T ss_dssp EEEEEEETTTCCEEEEEECCTTE----------EEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEE
T ss_pred EEEEEEeCCCCeEEEEEeCCCCc----------ceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEE
Confidence 56788887776654444444332 445544 4433336888886 357899999874432
Q ss_pred cCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEecCCcEEEEEcCCCCCCCCccCCccccccCCCcce-eeCC
Q 021160 70 YSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQV-YSGH 148 (316)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 148 (316)
+.+... ...+++++++-- +| +|+++...+|++|++... +.++. ....
T Consensus 877 ----------~lv~~~----~v~g~v~al~~~-~g-~Lla~ig~~l~vy~l~~~----------------~~L~~~~~~~ 924 (1158)
T 3ei3_A 877 ----------QTVAEK----EVKGAVYSMVEF-NG-KLLASINSTVRLYEWTTE----------------KELRTECNHY 924 (1158)
T ss_dssp ----------EEEEEE----EESSCEEEEEEE-TT-EEEEEETTEEEEEEECTT----------------SCEEEEEEEC
T ss_pred ----------EEEEEE----EcCCcCEEEeee-CC-EEEEEcCCEEEEEECCCC----------------ceEEEEeecc
Confidence 111111 225678887643 34 566666789999999764 22221 1111
Q ss_pred cCCceeeeEEEecCCCcEEEEeccCCeEEEEec--cCCeeEEEeec-CccceEEEEEcCCCCeEEEEeCCCcEEEecCCC
Q 021160 149 RNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKK--KGGKLVRLMVG-DRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMP 225 (316)
Q Consensus 149 ~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~--~~~~~~~~~~~-~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~ 225 (316)
.. ..+..+. ..+++++.|..-..|.++.. ..+++...-.. +...++++.+-.+ ..++.+..+|.+.+.....
T Consensus 925 ~~-i~~~~l~---~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~-~t~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 925 NN-IMALYLK---TKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDD-DNFLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp CC-SCEEEEE---EETTEEEEEESSBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEET-TEEEEEETTSEEEEEEECT
T ss_pred cc-EEEEEEe---ccCCEEEEEEhhheEEEEEEEcCCCeEEEEEeecccccEEEEEEEcc-CcEEEEcCCCcEEEEecCC
Confidence 11 0022333 24788999988777776554 44554433332 4457888887644 4677788899999887554
No 313
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.47 E-value=0.15 Score=40.84 Aligned_cols=185 Identities=9% Similarity=0.021 Sum_probs=88.8
Q ss_pred cEEEEEec--CCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEE-ecC----CcEEEEEc
Q 021160 48 NYFAVGGS--DEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLIS-YND----ELVYLFEK 120 (316)
Q Consensus 48 ~~l~~g~~--dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s-~~d----~~i~iwd~ 120 (316)
.+++.|+. ...+.+||..+.++......+ .. ......+. .++.+++. |.+ ..+.+||.
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p------------~~-r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~ 77 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPF------------EK-RRDAACVF--WDNVVYILGGSQLFPIKRMDCYNV 77 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEECCCCS------------CC-CBSCEEEE--ETTEEEEECCBSSSBCCEEEEEET
T ss_pred eEEEEeCCCCCceEEEecCCCCCEecCCCCC------------cc-cceeEEEE--ECCEEEEEeCCCCCCcceEEEEeC
Confidence 56666764 367889999888754321110 10 11111222 24555555 433 56888888
Q ss_pred CCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEeccC------CeEEEEeccCCeeEEE--eec
Q 021160 121 NMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDC------GHLFIWKKKGGKLVRL--MVG 192 (316)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d------g~v~~wd~~~~~~~~~--~~~ 192 (316)
.+. ....+........-.+++. .++.+++.|+.+ ..+.+||+.+.+-... +..
T Consensus 78 ~~~-----------------~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~ 138 (306)
T 3ii7_A 78 VKD-----------------SWYSKLGPPTPRDSLAACA--AEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLT 138 (306)
T ss_dssp TTT-----------------EEEEEECCSSCCBSCEEEE--ETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSS
T ss_pred CCC-----------------eEEECCCCCccccceeEEE--ECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcC
Confidence 765 1112221111111112222 256777777754 4588999887754322 211
Q ss_pred CccceEEEEEcCCCCeEEEEeC---------CCcEEEecCCCCCCCCCCCCcccceeeeecCCCCceeEEecCC-----C
Q 021160 193 DRHVVNQLEPHPHIPMFATCGI---------EKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLTPD-----V 258 (316)
Q Consensus 193 ~~~~v~~~~~~p~~~~l~s~~~---------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d-----~ 258 (316)
....-..+.+ ++++++.|+. -..+.+||+.+.+...+.....+.........++.+++.++.+ .
T Consensus 139 ~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~ 216 (306)
T 3ii7_A 139 QRCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLD 216 (306)
T ss_dssp CCBSCEEEEE--TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBC
T ss_pred CcceeEEEEE--CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEECCEEEEEeCCCCCCCCc
Confidence 1111122222 5666666653 3458899998875222221111111111111245566665543 3
Q ss_pred eEEEEEeccc
Q 021160 259 IMHVLRLQRR 268 (316)
Q Consensus 259 ~~~~w~~~~~ 268 (316)
.+.++|+.+.
T Consensus 217 ~~~~yd~~~~ 226 (306)
T 3ii7_A 217 NVEYYDIKLN 226 (306)
T ss_dssp CEEEEETTTT
T ss_pred eEEEeeCCCC
Confidence 4667776554
No 314
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.44 E-value=0.13 Score=41.53 Aligned_cols=104 Identities=6% Similarity=-0.029 Sum_probs=52.4
Q ss_pred CCcEEEEeccC--------CeEEEEeccCCeeEE--EeecCccceEEEEEcCCCCeEEEEeC-C-----CcEEEecCCCC
Q 021160 163 NDEYVMSGSDC--------GHLFIWKKKGGKLVR--LMVGDRHVVNQLEPHPHIPMFATCGI-E-----KTVKLWAPMPT 226 (316)
Q Consensus 163 ~~~~l~~~~~d--------g~v~~wd~~~~~~~~--~~~~~~~~v~~~~~~p~~~~l~s~~~-d-----~~i~iwd~~~~ 226 (316)
++.+++.|+.+ ..+.+||+.+.+-.. .++.....-. ++. .++++++.|+. + ..+.+||+.+.
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~-~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~ 175 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHT-VLS-HMDLVYVIGGKGSDRKCLNKMCVYDPKKF 175 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCE-EEE-ETTEEEEECCBCTTSCBCCCEEEEETTTT
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCccccee-EEE-ECCEEEEEeCCCCCCcccceEEEEeCCCC
Confidence 56677777642 458899988765322 2221111112 222 35667777765 2 36889998877
Q ss_pred CCCCCCCCcccceeeeecCCCCceeEEecCCC-----eEEEEEeccc
Q 021160 227 DFPPLPDNAEKIMKANKQGREDHSRITLTPDV-----IMHVLRLQRR 268 (316)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~-----~~~~w~~~~~ 268 (316)
+...+.....+.........++.+++.++.++ .+.++|+.+.
T Consensus 176 ~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 222 (315)
T 4asc_A 176 EWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDN 222 (315)
T ss_dssp EEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTT
T ss_pred eEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCC
Confidence 62222211111111111122556666665543 4666666544
No 315
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.24 E-value=0.31 Score=39.12 Aligned_cols=104 Identities=9% Similarity=0.039 Sum_probs=53.4
Q ss_pred CCcEEEEeccC-----CeEEEEeccCCeeEEE--eecCccceEEEEEcCCCCeEEEEeCC-----CcEEEecCCCCCCCC
Q 021160 163 NDEYVMSGSDC-----GHLFIWKKKGGKLVRL--MVGDRHVVNQLEPHPHIPMFATCGIE-----KTVKLWAPMPTDFPP 230 (316)
Q Consensus 163 ~~~~l~~~~~d-----g~v~~wd~~~~~~~~~--~~~~~~~v~~~~~~p~~~~l~s~~~d-----~~i~iwd~~~~~~~~ 230 (316)
++.+++.|+.+ ..+.+||+.+.+-... ++.....-..+.+ ++++++.|+.+ ..+.+||+.+.+...
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 198 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRM 198 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEee
Confidence 56777777643 3588899887653321 2211112122222 56677777654 458899988776222
Q ss_pred CCCCcccceeeeecCCCCceeEEecCC-----CeEEEEEeccc
Q 021160 231 LPDNAEKIMKANKQGREDHSRITLTPD-----VIMHVLRLQRR 268 (316)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~s~~~d-----~~~~~w~~~~~ 268 (316)
+.....+.........++.+++.++.+ ..+.++|+.+.
T Consensus 199 ~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~ 241 (308)
T 1zgk_A 199 ITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETE 241 (308)
T ss_dssp CCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred CCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCC
Confidence 221111111111111255666666554 45777776654
No 316
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.09 E-value=0.47 Score=39.03 Aligned_cols=151 Identities=12% Similarity=0.118 Sum_probs=79.7
Q ss_pred ceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccC----CCeEEEe-
Q 021160 36 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNT----SELLISY- 110 (316)
Q Consensus 36 ~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~l~s~- 110 (316)
.-..++|.|++ ++++ +..+|.|++++ .++. ..+.... +..........++++|+ +.++++.
T Consensus 32 ~P~~ia~~pdG-~l~V-~e~~g~I~~i~--~g~~-------~~~~~~~---v~~~g~~~p~gia~~pdf~~~g~lYv~~~ 97 (352)
T 2ism_A 32 VPWALAFLPDG-GMLI-AERPGRIRLFR--EGRL-------STYAELS---VYHRGESGLLGLALHPRFPQEPYVYAYRT 97 (352)
T ss_dssp CEEEEEECTTS-CEEE-EETTTEEEEEE--TTEE-------EEEEECC---CCCSTTCSEEEEEECTTTTTSCEEEEEEE
T ss_pred CceEEEEcCCC-eEEE-EeCCCeEEEEE--CCCc-------cEeecce---EeecCCCCceeEEECCCCCCCCEEEEEEe
Confidence 45799999999 6544 45669999988 3431 0111111 11122346789999998 4455553
Q ss_pred cC-----CcEEEEEcCCCCCCCCccCCccccccCC-CcceeeC-CcCCceeeeEEEecCCCcEEEEecc-----------
Q 021160 111 ND-----ELVYLFEKNMGLGPSPLSLSPEDLQKRE-EPQVYSG-HRNSQTVKGVNFFGPNDEYVMSGSD----------- 172 (316)
Q Consensus 111 ~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~i~~~~~~~~~~~~l~~~~~----------- 172 (316)
.. ..|..++..... +...+ ....+.. .........++| .|+|.+.++-+.
T Consensus 98 ~~~~~~~~~v~r~~~~~~~-----------~~~~~~l~~~~p~~~~~~h~~~~l~~-~pdG~Lyv~~G~~~~~~~~~d~~ 165 (352)
T 2ism_A 98 VAEGGLRNQVVRLRHLGER-----------GVLDRVVLDGIPARPHGLHSGGRIAF-GPDGMLYVTTGEVYERELAQDLA 165 (352)
T ss_dssp ECTTSSEEEEEEEEECSSC-----------EEEEEEEEEEECCCTTCCCCCCCEEE-CTTSCEEEECCCTTCGGGGGCTT
T ss_pred cCCCCCccEEEEEEeCCCC-----------cCceEEEEEeCCCCCCCCcCCceEEE-CCCCCEEEEECCCCCCccccCCC
Confidence 22 678888876320 00001 1111221 000012467888 999976666432
Q ss_pred --CCeEEEEeccCC-------------eeEEEeecCccceEEEEEcC-CCCeEEEEe
Q 021160 173 --CGHLFIWKKKGG-------------KLVRLMVGDRHVVNQLEPHP-HIPMFATCG 213 (316)
Q Consensus 173 --dg~v~~wd~~~~-------------~~~~~~~~~~~~v~~~~~~p-~~~~l~s~~ 213 (316)
.|.|.-++.... .......++. ....++|+| ++.++++-.
T Consensus 166 ~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~r-np~g~a~d~~~g~l~v~d~ 221 (352)
T 2ism_A 166 SLGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGHR-NPQGLAWHPKTGELFSSEH 221 (352)
T ss_dssp CSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECCS-EECCCEECTTTCCEEEEEE
T ss_pred CCceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcCC-CcccEEEECCCCCEEEEEc
Confidence 256666665420 1111112333 356799999 666655443
No 317
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.09 E-value=0.46 Score=40.72 Aligned_cols=117 Identities=11% Similarity=0.079 Sum_probs=59.1
Q ss_pred ceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccC----CCeEEEe-
Q 021160 36 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNT----SELLISY- 110 (316)
Q Consensus 36 ~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~l~s~- 110 (316)
...+|+|.|+| +++++-...+.|++++..+++.. .+..+...............|+|+|+ +.+.++.
T Consensus 28 ~P~~~a~~pdG-~l~V~e~~gg~I~~~~~~~g~~~-------~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s 99 (454)
T 1cru_A 28 KPHALLWGPDN-QIWLTERATGKILRVNPESGSVK-------TVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGT 99 (454)
T ss_dssp SEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEE-------EEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEE
T ss_pred CceEEEEcCCC-cEEEEEcCCCEEEEEECCCCcEe-------EEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEe
Confidence 45799999999 66665443346888876544311 11111100000112456789999995 4455553
Q ss_pred c------------CCcEEEEEcCCCCCCCCccCCccccccCCCc-ceeeCCcCCceeeeEEEecCCCcEEEEec
Q 021160 111 N------------DELVYLFEKNMGLGPSPLSLSPEDLQKREEP-QVYSGHRNSQTVKGVNFFGPNDEYVMSGS 171 (316)
Q Consensus 111 ~------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~l~~~~ 171 (316)
. ...|..+++..... .+...+.+ ..+.. ........++| .|+|.+.++.+
T Consensus 100 ~~~~~~~~~~~~~~~~v~r~~~~~~~~---------~~~~~~~i~~~~p~-~~~H~~~~l~f-~pDG~Lyv~~G 162 (454)
T 1cru_A 100 FKNPKSTDKELPNQTIIRRYTYNKSTD---------TLEKPVDLLAGLPS-SKDHQSGRLVI-GPDQKIYYTIG 162 (454)
T ss_dssp EECTTC--CCSCEEEEEEEEEEETTTT---------EEEEEEEEEEEECC-CSSCCEEEEEE-CTTSCEEEEEC
T ss_pred ccccCCCccccccccEEEEEEECCCCC---------CcCCcEEEEEcCCC-CCCCCCCeEeE-CCCCeEEEEEC
Confidence 2 13466666543200 00000111 11111 11122688998 99998777654
No 318
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.09 E-value=0.44 Score=38.61 Aligned_cols=193 Identities=8% Similarity=0.073 Sum_probs=114.9
Q ss_pred eeeEEEEeeC-CCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEE-Ee------cCCcEEEEeCcCCcccCCCC
Q 021160 3 LFNMLFDLRS-DSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAV-GG------SDEYARVYDIRKCHWYSPIS 74 (316)
Q Consensus 3 g~v~vwd~~~-~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~-g~------~dg~v~~wd~~~~~~~~~~~ 74 (316)
..|..|++.. ..+.+++..+..-. ...|-.-..+++. ++++. |- -.|.+.+|..+.+.
T Consensus 126 taVyHWs~~~~s~P~kvFdR~~~L~-------~~QIInY~~d~~~-kW~~l~GI~~~~~~v~G~mQLYS~er~~------ 191 (365)
T 2xzh_A 126 NAVYHWSMEGESQPVKMFDRHSSLA-------GCQIINYRTDAKQ-KWLLLTGISAQQNRVVGAMQLYSVDRKV------ 191 (365)
T ss_dssp SEEEEEESSTTCCCEEEEECCGGGT-------TCEEEEEEECTTS-CEEEEEEEEEETTEEEEEEEEEETTTTE------
T ss_pred CcEEEEcccCCCCCceeeecchhcc-------cceEEEEEECCCC-CEEEEEeEeccCCccceeEEEEeecccc------
Confidence 3688999875 34666666543321 3567788888988 55544 42 24778899887553
Q ss_pred CCCCceecccccccCCCcccEEEEEEccCC---CeEEEec----CCcEEEEEcCCCCCCCCccCCccccccCCCcceeeC
Q 021160 75 SDTPVDTFCPRHLIGKNNIHITGLAYSNTS---ELLISYN----DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSG 147 (316)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~l~s~~----d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (316)
.+.+.+|......+...... .+++.+. .+++++.++....... ..+.. +....+-.
T Consensus 192 ----------sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~-~~f~k------k~vdi~fp 254 (365)
T 2xzh_A 192 ----------SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN-QPFPK------KAVDVFFP 254 (365)
T ss_dssp ----------EEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTC-CCCCC------EEEEECCC
T ss_pred ----------cceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCC-CCccc------ccceeeCC
Confidence 23336776655444332221 1333332 3689999985531000 00000 11111111
Q ss_pred Cc-CCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCC
Q 021160 148 HR-NSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPT 226 (316)
Q Consensus 148 ~~-~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~ 226 (316)
.. .....-++.. ++....+..-+.-|.+++||++++.++..-+-....|...+-+....-++.....|.|.--.+...
T Consensus 255 pea~~DFPVamqv-s~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~ 333 (365)
T 2xzh_A 255 PEAQNDFPVAMQI-SEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEE 333 (365)
T ss_dssp TTCTTCCEEEEEE-ETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEEEEEEECTT
T ss_pred ccccCCceEEEEe-cccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEEcCCCEEEEEEECcc
Confidence 11 1122556666 777888999999999999999999998877666667766666555555666677887776666554
Q ss_pred C
Q 021160 227 D 227 (316)
Q Consensus 227 ~ 227 (316)
.
T Consensus 334 ~ 334 (365)
T 2xzh_A 334 N 334 (365)
T ss_dssp T
T ss_pred c
Confidence 4
No 319
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.06 E-value=0.42 Score=38.16 Aligned_cols=104 Identities=13% Similarity=0.073 Sum_probs=52.3
Q ss_pred CCcEEEEeccCC-----eEEEEeccCCeeEEE--eecCccceEEEEEcCCCCeEEEEeCC-------CcEEEecCCCCCC
Q 021160 163 NDEYVMSGSDCG-----HLFIWKKKGGKLVRL--MVGDRHVVNQLEPHPHIPMFATCGIE-------KTVKLWAPMPTDF 228 (316)
Q Consensus 163 ~~~~l~~~~~dg-----~v~~wd~~~~~~~~~--~~~~~~~v~~~~~~p~~~~l~s~~~d-------~~i~iwd~~~~~~ 228 (316)
++.+++.|+.++ .+.+||+.+.+-... +.........+.+ ++++++.|+.+ ..+.+||+.+.+.
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W 185 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEW 185 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEE
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcE
Confidence 567777776543 578888887654322 2211111122222 56666666542 3588899887652
Q ss_pred CCCCCCcccceeeeecCCCCceeEEecCC-----CeEEEEEeccc
Q 021160 229 PPLPDNAEKIMKANKQGREDHSRITLTPD-----VIMHVLRLQRR 268 (316)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~d-----~~~~~w~~~~~ 268 (316)
..+.....+.........++.+++.++.+ ..+.++|+.+.
T Consensus 186 ~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 230 (302)
T 2xn4_A 186 TYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTN 230 (302)
T ss_dssp EEECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTT
T ss_pred EECCCCccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCC
Confidence 22111111111111112245666666554 35777776654
No 320
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.05 E-value=0.33 Score=36.87 Aligned_cols=112 Identities=13% Similarity=-0.014 Sum_probs=64.7
Q ss_pred cEEEEEEccCCCeEEEecCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEeccC
Q 021160 94 HITGLAYSNTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDC 173 (316)
Q Consensus 94 ~i~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d 173 (316)
.+..++|+|+|.+.+. .++.++-.+..+... ..+ .-..+.-+.........+.| .++|.+.++ .|
T Consensus 42 ~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~------~~W-----~~s~t~IG~~Gw~~F~a~~f-D~~G~LYav--~d 106 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV-LNDKIYKGTPPTHDN------DNW-----MGRAKKIGNGGWNQFQFLFF-DPNGYLYAV--SK 106 (236)
T ss_dssp TCSEEEECTTSCEEEE-ETTEEEEESCCCSTT------CCH-----HHHCEEEECSCGGGCSEEEE-CTTSCEEEE--ET
T ss_pred cceeEEECCCccEEEE-eCCeEEEECCCCCCc------ccc-----cccccEecccccccceEEEE-CCCCCEEEe--CC
Confidence 5679999999997777 788766666533200 000 00001111111111366777 899988877 56
Q ss_pred CeEEEEeccCCeeE------EEe-ecCccceEEEEEcCCCCeEEEEeCCCcEEEec
Q 021160 174 GHLFIWKKKGGKLV------RLM-VGDRHVVNQLEPHPHIPMFATCGIEKTVKLWA 222 (316)
Q Consensus 174 g~v~~wd~~~~~~~------~~~-~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd 222 (316)
|.|+-++..+.... ..+ ..-=..+..|.+.|+|.+.+.. |+.++-+.
T Consensus 107 G~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~ 160 (236)
T 1tl2_A 107 DKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKAL 160 (236)
T ss_dssp TEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEEC
T ss_pred CEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecC
Confidence 99988886432111 111 1111467899999999887666 77764433
No 321
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.05 E-value=0.49 Score=38.82 Aligned_cols=158 Identities=11% Similarity=0.073 Sum_probs=83.9
Q ss_pred ceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccC----CCeEEE-e
Q 021160 36 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNT----SELLIS-Y 110 (316)
Q Consensus 36 ~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~l~s-~ 110 (316)
....|+|.|++ .++++--..|.|++++...++.. ++.. ...+..........|+++|+ +.+.++ +
T Consensus 33 ~P~~ia~~pdG-~llVter~~G~I~~v~~~~g~~~-------~v~~--~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt 102 (347)
T 3das_A 33 SPWGLAPLPGG-DLLVSSRDEATITRVDAKTGRKT-------ELGE--VPGVSPSGEGGLLGIALSPDYASDHMVYAYFT 102 (347)
T ss_dssp SEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEE-------EEEE--CTTCCCBTTBSEEEEEECTTHHHHCEEEEEEE
T ss_pred CceEEEEcCCC-cEEEEEecCCEEEEEECCCCcEe-------eecc--cCceeecCCCCceeeEeccccccCCEEEEEEe
Confidence 46799999999 66666554899999986655411 1111 11111233566889999995 445554 2
Q ss_pred --cCCcEEEEEcCCCCCCCCccCCccccccCCC-cceeeCCcCCceeeeEEEecCCCcEEEEecc-------------CC
Q 021160 111 --NDELVYLFEKNMGLGPSPLSLSPEDLQKREE-PQVYSGHRNSQTVKGVNFFGPNDEYVMSGSD-------------CG 174 (316)
Q Consensus 111 --~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-------------dg 174 (316)
.+..|.-|.+....... .. +...+. +..+.. ........+.| .|+|.+.++.++ .|
T Consensus 103 ~~~~~~v~R~~~~~~~~~~-~~-----~~~~~~i~~~~p~-~~~H~g~~l~f-gpDG~Lyvt~Gd~~~~~~~qd~~~~~G 174 (347)
T 3das_A 103 SASDNRIVRMLYDEKKPSG-EQ-----LGAPDTVFRGIPK-GVIHNGGRIAF-GPDKMLYAGTGESGDTGLSQDRKSLGG 174 (347)
T ss_dssp CSSSEEEEEEEBCTTSCTT-CC-----BCCCEEEEEEECC-CSSCCCCCEEE-CTTSCEEEECBCTTCGGGTTCTTCSTT
T ss_pred cCCCCEEEEEEeCCCCccc-cc-----CCCcEEEEEcCCC-CCCccCccccC-CCCCCEEEEECCCCCCccccCCCCCCC
Confidence 35667777765421000 00 000011 111111 11112567888 999987776542 35
Q ss_pred eEEEEeccCC----e---eEEEe-ecCccceEEEEEcCCCCeEEEE
Q 021160 175 HLFIWKKKGG----K---LVRLM-VGDRHVVNQLEPHPHIPMFATC 212 (316)
Q Consensus 175 ~v~~wd~~~~----~---~~~~~-~~~~~~v~~~~~~p~~~~l~s~ 212 (316)
.|.-.+.... . ....+ .+|. ....++|+|++.++++-
T Consensus 175 ~IlRi~~dG~ip~~nPf~~~~i~a~G~R-Np~Gla~dp~G~L~~~d 219 (347)
T 3das_A 175 KILRMTPDGEPAPGNPFPGSPVYSYGHR-NVQGLAWDDKQRLFASE 219 (347)
T ss_dssp CEEEECTTSSBCTTCSSTTCCEEEBCCS-BCCEEEECTTCCEEEEE
T ss_pred EEEEEeCCCCccCCCCCCCCeEEeeCCC-CcceEEECCCCCEEEEe
Confidence 5555565421 0 01112 2454 35679999988776544
No 322
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.04 E-value=0.45 Score=38.31 Aligned_cols=63 Identities=10% Similarity=0.148 Sum_probs=36.7
Q ss_pred CCcEEEEecc------CCeEEEEeccCCeeEE--EeecCccceEEEEEcCCCCeEEEEeCCC-----cEEEecCCCCC
Q 021160 163 NDEYVMSGSD------CGHLFIWKKKGGKLVR--LMVGDRHVVNQLEPHPHIPMFATCGIEK-----TVKLWAPMPTD 227 (316)
Q Consensus 163 ~~~~l~~~~~------dg~v~~wd~~~~~~~~--~~~~~~~~v~~~~~~p~~~~l~s~~~d~-----~i~iwd~~~~~ 227 (316)
++.+++.|+. -..+.+||+.+.+-.. .++.....-..+.+ ++++++.|+.++ .+.+||+.+.+
T Consensus 148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 148 MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCe
Confidence 5667777765 2468899988765322 12211111122222 567777776554 58889998876
No 323
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=95.80 E-value=0.45 Score=39.16 Aligned_cols=101 Identities=18% Similarity=0.242 Sum_probs=60.5
Q ss_pred cEEEEEEccCCCeEEEecCCcEEEEEcCCCCCCCCccCCccccccCCCcc---eeeCCcCCceeeeEEEecCC---CcEE
Q 021160 94 HITGLAYSNTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQ---VYSGHRNSQTVKGVNFFGPN---DEYV 167 (316)
Q Consensus 94 ~i~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~~---~~~l 167 (316)
....++|.|+|+++++..++.|++++ .+.. ..+. .+.... .....+++ +|+ +..|
T Consensus 32 ~P~~ia~~pdG~l~V~e~~g~I~~i~--~g~~--------------~~~~~~~v~~~g~--~~p~gia~-~pdf~~~g~l 92 (352)
T 2ism_A 32 VPWALAFLPDGGMLIAERPGRIRLFR--EGRL--------------STYAELSVYHRGE--SGLLGLAL-HPRFPQEPYV 92 (352)
T ss_dssp CEEEEEECTTSCEEEEETTTEEEEEE--TTEE--------------EEEEECCCCCSTT--CSEEEEEE-CTTTTTSCEE
T ss_pred CceEEEEcCCCeEEEEeCCCeEEEEE--CCCc--------------cEeecceEeecCC--CCceeEEE-CCCCCCCCEE
Confidence 45689999999988887779999998 3300 0111 111112 23789999 887 4444
Q ss_pred EEe-ccC-----CeEEEEeccCCe-----e-EEEee---cCccceEEEEEcCCCCeEEEEe
Q 021160 168 MSG-SDC-----GHLFIWKKKGGK-----L-VRLMV---GDRHVVNQLEPHPHIPMFATCG 213 (316)
Q Consensus 168 ~~~-~~d-----g~v~~wd~~~~~-----~-~~~~~---~~~~~v~~~~~~p~~~~l~s~~ 213 (316)
+.+ ... ..|..++...++ . +..+. ........++|.|++.+.++.+
T Consensus 93 Yv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 93 YAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 444 332 678888876432 1 12233 1112346799999998766643
No 324
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=95.78 E-value=0.59 Score=37.63 Aligned_cols=63 Identities=17% Similarity=0.236 Sum_probs=36.0
Q ss_pred CCcEEEEecc------CCeEEEEeccCCeeEEE--eecCccceEEEEEcCCCCeEEEEeCC-----CcEEEecCCCCC
Q 021160 163 NDEYVMSGSD------CGHLFIWKKKGGKLVRL--MVGDRHVVNQLEPHPHIPMFATCGIE-----KTVKLWAPMPTD 227 (316)
Q Consensus 163 ~~~~l~~~~~------dg~v~~wd~~~~~~~~~--~~~~~~~v~~~~~~p~~~~l~s~~~d-----~~i~iwd~~~~~ 227 (316)
++.+++.|+. -..+.+||+.+.+-... +.........+.+ ++++++.|+.+ ..+.+||+.+.+
T Consensus 158 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 158 NGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp TTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred CCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 5667777764 23589999987653322 2211111122222 56676666643 357789998876
No 325
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=95.78 E-value=0.33 Score=39.13 Aligned_cols=63 Identities=10% Similarity=0.115 Sum_probs=35.5
Q ss_pred CCcEEEEeccC-------CeEEEEeccCCeeEEE--eecCccceEEEEEcCCCCeEEEEeC------CCcEEEecCCCCC
Q 021160 163 NDEYVMSGSDC-------GHLFIWKKKGGKLVRL--MVGDRHVVNQLEPHPHIPMFATCGI------EKTVKLWAPMPTD 227 (316)
Q Consensus 163 ~~~~l~~~~~d-------g~v~~wd~~~~~~~~~--~~~~~~~v~~~~~~p~~~~l~s~~~------d~~i~iwd~~~~~ 227 (316)
++.+++.|+.+ ..+.+||+.+.+-... ++.....- +++. .++++++.|+. -..+.+||+.+.+
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 186 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGH-NVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGD 186 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESC-EEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTE
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCccccc-EEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCE
Confidence 56677777653 3578889887653322 21111111 1222 35666666653 2358899998875
No 326
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=95.23 E-value=0.93 Score=37.33 Aligned_cols=102 Identities=14% Similarity=0.158 Sum_probs=59.9
Q ss_pred cEEEEEEccCCCeEEEecCCcEEEEEcCCCCCCCCccCCccccccCC-Ccceee-CCcCCceeeeEEEecCC---CcEEE
Q 021160 94 HITGLAYSNTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKRE-EPQVYS-GHRNSQTVKGVNFFGPN---DEYVM 168 (316)
Q Consensus 94 ~i~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~i~~~~~~~~~---~~~l~ 168 (316)
....++|.|+|+++++-.++.|++++. .+ . .+..+. ..........+++ +|+ +..|+
T Consensus 30 ~P~~ia~~pdG~l~V~e~~g~I~~~d~-~G----------------~~~~~~~~v~~~g~~g~~gia~-~pdf~~~g~ly 91 (354)
T 3a9g_A 30 VPWSIAPLGGGRYLVTERPGRLVLISP-SG----------------KKLVASFDVANVGEAGLLGLAL-HPEFPKKSWVY 91 (354)
T ss_dssp CEEEEEEEETTEEEEEETTTEEEEECS-SC----------------EEEEEECCCCCSTTCSEEEEEE-CTTTTTSCEEE
T ss_pred CCeEEEEcCCCeEEEEeCCCEEEEEeC-CC----------------ceEeeccceeecCCCceeeEEe-CCCCCcCCEEE
Confidence 467899999999888877799999863 33 1 111110 0111123788998 887 44444
Q ss_pred Eecc----C----CeEEEEeccCC-------eeE-EEeec-CccceEEEEEcCCCCeEEEEe
Q 021160 169 SGSD----C----GHLFIWKKKGG-------KLV-RLMVG-DRHVVNQLEPHPHIPMFATCG 213 (316)
Q Consensus 169 ~~~~----d----g~v~~wd~~~~-------~~~-~~~~~-~~~~v~~~~~~p~~~~l~s~~ 213 (316)
.+.. + ..|..|+.... +.+ ..+.. .......++|.|++.++++.+
T Consensus 92 v~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 92 LYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp EEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred EEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence 4332 3 56777876643 111 12321 112346799999998766644
No 327
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=95.18 E-value=1.1 Score=36.89 Aligned_cols=185 Identities=12% Similarity=0.182 Sum_probs=98.4
Q ss_pred ceeeEEEEeeCCCcc-eEEEeccc-cccccCCCCccceEEEEECC--CCCc-EEEEEec--CCcEEEEeCcCCcccCCCC
Q 021160 2 VLFNMLFDLRSDSAT-RLFYCSSF-SENSKQPMNSIRLNAIVIDP--RNPN-YFAVGGS--DEYARVYDIRKCHWYSPIS 74 (316)
Q Consensus 2 ~g~v~vwd~~~~~~~-~~~~~~~~-~~~~~~~gh~~~v~~~~~~~--~~~~-~l~~g~~--dg~v~~wd~~~~~~~~~~~ 74 (316)
.|.|.++|+.+.... ..+..... .. ........+.+.+ ++.. ++++-.. +..+.+|++....-
T Consensus 82 ~G~I~~~d~~~~~~~~~~l~~~g~~~~-----~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~----- 151 (355)
T 3sre_A 82 SGKILLMDLNEKEPAVSELEIIGNTLD-----ISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEK----- 151 (355)
T ss_dssp CCEEEEEETTSSSCCEEECEEECSSCC-----GGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTT-----
T ss_pred CCeEEEEecCCCCCceEEEEccCCCCC-----cCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCC-----
Confidence 478889998743221 12222110 00 0122445666644 3422 4444333 56788888765320
Q ss_pred CCCCceecccccccCCCcccEEEEEEccCCCeEEEec----C--------------CcEEEEEcCCCCCCCCccCCcccc
Q 021160 75 SDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYN----D--------------ELVYLFEKNMGLGPSPLSLSPEDL 136 (316)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~----d--------------~~i~iwd~~~~~~~~~~~~~~~~~ 136 (316)
... ....+....-...+.+.+.++|.++++.. | +.|+.+|. +
T Consensus 152 ----~~~-~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~------------- 211 (355)
T 3sre_A 152 ----SLL-HLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--N------------- 211 (355)
T ss_dssp ----EEE-EEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--T-------------
T ss_pred ----EEE-EEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--C-------------
Confidence 000 11111111234578899999999887743 1 23444432 2
Q ss_pred ccCCCcceeeCCcCCceeeeEEEecCCCcEEEEe-ccCCeEEEEeccC-Cee--EEEeecCccceEEEEEcC-CCCeEEE
Q 021160 137 QKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSG-SDCGHLFIWKKKG-GKL--VRLMVGDRHVVNQLEPHP-HIPMFAT 211 (316)
Q Consensus 137 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~-~~dg~v~~wd~~~-~~~--~~~~~~~~~~v~~~~~~p-~~~~l~s 211 (316)
..+.+...-.. .+.++| +|+++.++.+ +..+.|+.|++.. ++. ...+ ...+..-.+++.+ +|++.++
T Consensus 212 ----~~~~~~~~l~~--pNGia~-spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva 283 (355)
T 3sre_A 212 ----DVRVVAEGFDF--ANGINI-SPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVG 283 (355)
T ss_dssp ----CCEEEEEEESS--EEEEEE-CTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEE
T ss_pred ----eEEEeecCCcc--cCcceE-CCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEE
Confidence 12222222222 688999 9999877665 4678999999863 332 2233 2235667788998 5888776
Q ss_pred EeCC-CcEEEecCC
Q 021160 212 CGIE-KTVKLWAPM 224 (316)
Q Consensus 212 ~~~d-~~i~iwd~~ 224 (316)
+..+ +.|..|+..
T Consensus 284 ~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 284 CHPNGMRIFFYDAE 297 (355)
T ss_dssp EESCHHHHHSCCTT
T ss_pred ecCCceEEEEECCC
Confidence 6544 244444443
No 328
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.08 E-value=0.95 Score=44.26 Aligned_cols=149 Identities=11% Similarity=0.195 Sum_probs=92.9
Q ss_pred EEEEccCCCeEEEecCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEeccCCeE
Q 021160 97 GLAYSNTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHL 176 (316)
Q Consensus 97 ~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v 176 (316)
+.-.+|..++++.-...++.|||+++. ..++ .|.-...|.--.|.++ +.|+..+ +..|
T Consensus 70 sAIMnP~~~iiALrag~~lQiFnl~~k----------------~klk---s~~~~e~VvfWkWis~--~~l~lVT-~~aV 127 (1630)
T 1xi4_A 70 SAIMNPASKVIALKAGKTLQIFNIEMK----------------SKMK---AHTMTDDVTFWKWISL--NTVALVT-DNAV 127 (1630)
T ss_pred hhccCCCcceEEEecCCeEEEeehHHh----------------hhhc---ccccCCCceEEEecCC--CeeEEEc-CCeE
Confidence 345678777777766889999999876 3333 3332233666666443 3444444 4579
Q ss_pred EEEeccC-CeeEEEeecC----ccceEEEEEcCCCCeEEEEe-------CCCcEEEecCCCCCCCCCCCCcccceeeeec
Q 021160 177 FIWKKKG-GKLVRLMVGD----RHVVNQLEPHPHIPMFATCG-------IEKTVKLWAPMPTDFPPLPDNAEKIMKANKQ 244 (316)
Q Consensus 177 ~~wd~~~-~~~~~~~~~~----~~~v~~~~~~p~~~~l~s~~-------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 244 (316)
+-|++.. ..+...+..| ...|.....+++.++++..| ..|.+.+|..+.+..+.+.+|...-.+...-
T Consensus 128 yHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~iegha~~F~~~~~~ 207 (1630)
T 1xi4_A 128 YHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKME 207 (1630)
T ss_pred EEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchhhhHhHhhhheeccC
Confidence 9999963 3444444433 35677788899999965333 3578999999888877788777654332211
Q ss_pred C-CCCceeEEecCC----CeEEEEEecc
Q 021160 245 G-REDHSRITLTPD----VIMHVLRLQR 267 (316)
Q Consensus 245 ~-~~~~~~~s~~~d----~~~~~w~~~~ 267 (316)
. +....+++.... +.+++.++..
T Consensus 208 ~~~~~~~l~~f~~~~~~g~kLhi~Ei~~ 235 (1630)
T 1xi4_A 208 GNAEESTLFCFAVRGQAGGKLHIIEVGT 235 (1630)
T ss_pred CCCCCceEEEEEEecCCCceEEEEecCC
Confidence 1 122334443333 7889998854
No 329
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=94.83 E-value=0.8 Score=37.72 Aligned_cols=70 Identities=16% Similarity=0.092 Sum_probs=43.7
Q ss_pred eeeEEEecCCCcEEEEeccCCeEEEEeccCCe-eEEEee---cCccceEEEEEcCC---CCe-EEEEeC---C----CcE
Q 021160 154 VKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGK-LVRLMV---GDRHVVNQLEPHPH---IPM-FATCGI---E----KTV 218 (316)
Q Consensus 154 i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~-~~~~~~---~~~~~v~~~~~~p~---~~~-l~s~~~---d----~~i 218 (316)
...++| .|+|.++++ ..+|.|++++ ..++ .+..+. ........|+++|+ +.. .++-+. + ..|
T Consensus 31 P~~ia~-~pdG~l~V~-e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v 107 (354)
T 3a9g_A 31 PWSIAP-LGGGRYLVT-ERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRV 107 (354)
T ss_dssp EEEEEE-EETTEEEEE-ETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEE
T ss_pred CeEEEE-cCCCeEEEE-eCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEE
Confidence 788998 889985555 5569999997 3455 222221 12346789999997 444 444332 3 466
Q ss_pred EEecCCCC
Q 021160 219 KLWAPMPT 226 (316)
Q Consensus 219 ~iwd~~~~ 226 (316)
..|+....
T Consensus 108 ~r~~~~~~ 115 (354)
T 3a9g_A 108 IRGRLDGS 115 (354)
T ss_dssp EEEEECSS
T ss_pred EEEEECCC
Confidence 67776543
No 330
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=94.83 E-value=0.23 Score=40.54 Aligned_cols=145 Identities=15% Similarity=0.113 Sum_probs=75.4
Q ss_pred cEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEE---EccCCCeEEE--ecCCcEEEEEcCC
Q 021160 48 NYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLA---YSNTSELLIS--YNDELVYLFEKNM 122 (316)
Q Consensus 48 ~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~~~~~~l~s--~~d~~i~iwd~~~ 122 (316)
.+++.++.||.|.-+|..+++........ ...++.... ...++..++. ..||.|+.++..+
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~--------------~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~ 76 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPE--------------NFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQ 76 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGG--------------GSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCC--------------ccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCC
Confidence 47888999999999999988754332111 000111100 0012334433 3688888888766
Q ss_pred CCCCCCccCCccccccCCCcceeeCCc--CCceeee----EEE---ecCCCcEEEEeccCCeEEEEeccCCeeEEEeecC
Q 021160 123 GLGPSPLSLSPEDLQKREEPQVYSGHR--NSQTVKG----VNF---FGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGD 193 (316)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~----~~~---~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~ 193 (316)
+ .....+.... ...++.. +.. ....+..+++|+.+|.+...|+.+|+.+..+...
T Consensus 77 G----------------~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 77 G----------------LQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPG 140 (339)
T ss_dssp E----------------EEEEEEEHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTT
T ss_pred C----------------cEEeeeccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecC
Confidence 5 1111111100 0000110 000 0014678899999999999999999999888632
Q ss_pred c--cce-----EEEEEc-----CCCCeEEEEeCCCcEEEec
Q 021160 194 R--HVV-----NQLEPH-----PHIPMFATCGIEKTVKLWA 222 (316)
Q Consensus 194 ~--~~v-----~~~~~~-----p~~~~l~s~~~d~~i~iwd 222 (316)
. ..+ .+.... ..+..++.+..+..+.+.+
T Consensus 141 ~~~~~~~~~~e~~~~~~d~~~d~~~~~v~ig~~~y~v~~~~ 181 (339)
T 2be1_A 141 SKNGYFGSQSVDCSPEEKIKLQECENMIVIGKTIFELGIHS 181 (339)
T ss_dssp CBCC--------------------CCEEEEEEEEEECEECC
T ss_pred CCcccccccccccccccccccccCCCeEEEecceEEEEEEC
Confidence 1 100 011110 1134566666677777766
No 331
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=94.77 E-value=1.6 Score=36.86 Aligned_cols=193 Identities=8% Similarity=0.078 Sum_probs=118.3
Q ss_pred eeeEEEEeeC-CCcceEEEeccccccccCCCCccceEEEEECCCCCcEEEE-Ee------cCCcEEEEeCcCCcccCCCC
Q 021160 3 LFNMLFDLRS-DSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAV-GG------SDEYARVYDIRKCHWYSPIS 74 (316)
Q Consensus 3 g~v~vwd~~~-~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~~-g~------~dg~v~~wd~~~~~~~~~~~ 74 (316)
..|.-|++.. ..+.++|..+..-. ...|-.-..++++ ++++. |- -.|.+.+|..+.+.
T Consensus 125 taVyHWsi~~~s~P~kvFdR~~~L~-------~~QIInY~~d~~~-kW~~l~GI~~~~~~v~G~mQLYS~er~~------ 190 (494)
T 1bpo_A 125 NAVYHWSMEGESQPVKMFDRHSSLA-------GCQIINYRTDAKQ-KWLLLTGISAQQNRVVGAMQLYSVDRKV------ 190 (494)
T ss_dssp SEEEEEESSSSCCCEEEEECCGGGT-------TCEEEEEEECTTS-SEEEEEEEEEETTEEEEEEEEEESTTCC------
T ss_pred CeeEEecccCCCCchhheecchhcc-------cceEEEEEECCCC-CeEEEEeecccCCcccceEEEeeccccc------
Confidence 4688999975 34666666543321 3567788889988 55544 42 24778899988553
Q ss_pred CCCCceecccccccCCCcccEEEEEEccCCC---eEEEec----CCcEEEEEcCCCCCCCCccCCccccccCCCcceeeC
Q 021160 75 SDTPVDTFCPRHLIGKNNIHITGLAYSNTSE---LLISYN----DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSG 147 (316)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~l~s~~----d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (316)
...+.+|......+....+.. +++.+. .++++|.++....... ..+.. +....+-.
T Consensus 191 ----------sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~-~~f~k------k~vdv~fp 253 (494)
T 1bpo_A 191 ----------SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN-QPFPK------KAVDVFFP 253 (494)
T ss_dssp ----------EEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTC-CCCCC------EEEECCCC
T ss_pred ----------cchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCC-CCccc------eeeeeeCC
Confidence 233377777665554433221 333332 4789999986531000 00000 01111111
Q ss_pred C-cCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCC
Q 021160 148 H-RNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPT 226 (316)
Q Consensus 148 ~-~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~ 226 (316)
. ......-++.. ++....+..-+.-|.+++||++++.++..-+-....|...+-+....-++.....|.|.--.+...
T Consensus 254 pe~~~DFPvamqv-s~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~ 332 (494)
T 1bpo_A 254 PEAQNDFPVAMQI-SEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEE 332 (494)
T ss_dssp TTSTTCCEEEEEE-ETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEECTT
T ss_pred cccccCceeEEEe-cccCCEEEEEecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEEEEEEccc
Confidence 1 11122456666 778888999999999999999999998877666677777666666566777778887776666554
Q ss_pred C
Q 021160 227 D 227 (316)
Q Consensus 227 ~ 227 (316)
.
T Consensus 333 ~ 333 (494)
T 1bpo_A 333 N 333 (494)
T ss_dssp T
T ss_pred c
Confidence 4
No 332
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=94.65 E-value=1.4 Score=36.23 Aligned_cols=153 Identities=11% Similarity=0.104 Sum_probs=78.4
Q ss_pred ceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccC----CCeEEEe-
Q 021160 36 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNT----SELLISY- 110 (316)
Q Consensus 36 ~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~l~s~- 110 (316)
....|+|.|++ +.++++...|.|++++.. ++... ++... ..+..........++++|+ +.++++.
T Consensus 19 ~P~~i~~~pdG-~~l~V~e~~G~i~~~~~~-g~~~~------~~~~~--~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~ 88 (353)
T 2g8s_A 19 HPWALAFLPDN-HGMLITLRGGELRHWQAG-KGLSA------PLSGV--PDVWAHGQGGLLDVVLAPDFAQSRRIWLSYS 88 (353)
T ss_dssp SEEEEEECSTT-CCEEEEETTTEEEEEETT-TEECC------CCBSC--CCCCCSTTCSEEEEEECTTHHHHCEEEEEEE
T ss_pred CcEEEEEcCCC-CEEEEEeCCceEEEEeCC-Cceee------EecCC--cccccCCCCCceeEEECCCCCCCCEEEEEEe
Confidence 45799999998 624455567999999853 33110 11111 0111122345789999995 4555552
Q ss_pred c-------CCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCc----CCceeeeEEEecCCCcEEEEecc-------
Q 021160 111 N-------DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHR----NSQTVKGVNFFGPNDEYVMSGSD------- 172 (316)
Q Consensus 111 ~-------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~l~~~~~------- 172 (316)
. ...|..|++..... .+.. ....+.... .......++| .|+|.+.++-++
T Consensus 89 ~~~~~g~~~~~v~r~~~~~~~~---------~~~~--~~~i~~~~p~~~~~~h~~~~l~~-~pdG~Lyv~~Gd~~~~~~~ 156 (353)
T 2g8s_A 89 EVGDDGKAGTAVGYGRLSDDLS---------KVTD--FRTVFRQMPKLSTGNHFGGRLVF-DGKGYLFIALGENNQRPTA 156 (353)
T ss_dssp EECSSSCEEEEEEEEEECTTSS---------BEEE--EEEEEECSSCCBSSSCCCCCEEE-CSSSEEEEEECCTTCGGGG
T ss_pred CCCCCCCceeEEEEEEECCCCC---------CCCc--eEEEEEECCCCCCCcccCccEEE-CCCCcEEEEECCCCCCCcc
Confidence 2 23566666643210 0000 000111110 0011457888 999976666433
Q ss_pred ------CCeEEEEeccCCe------------eEEEe-ecCccceEEEEEcC-CCCeEEE
Q 021160 173 ------CGHLFIWKKKGGK------------LVRLM-VGDRHVVNQLEPHP-HIPMFAT 211 (316)
Q Consensus 173 ------dg~v~~wd~~~~~------------~~~~~-~~~~~~v~~~~~~p-~~~~l~s 211 (316)
.|.|.-++....- ....+ .++. ....++|+| ++.++++
T Consensus 157 q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~r-np~gl~~d~~~g~l~~~ 214 (353)
T 2g8s_A 157 QDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIR-NPQGMAMNPWSNALWLN 214 (353)
T ss_dssp GCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCS-EEEEEEEETTTTEEEEE
T ss_pred CCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCc-CccceEEECCCCCEEEE
Confidence 2467777765220 11112 2343 467899999 6665544
No 333
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=94.52 E-value=1.6 Score=35.69 Aligned_cols=185 Identities=9% Similarity=0.107 Sum_probs=103.3
Q ss_pred cEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEcc----CCC---eEEE-e-c--CCcEE
Q 021160 48 NYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSN----TSE---LLIS-Y-N--DELVY 116 (316)
Q Consensus 48 ~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~---~l~s-~-~--d~~i~ 116 (316)
.+++.....+.+.+||+ .++.+ ..+ . ...++.+..-| .|+ ++++ . . +++|.
T Consensus 41 s~ii~t~k~~gL~Vydl-~G~~l--------------~~~-~--~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~ 102 (355)
T 3amr_A 41 SKLITTNKKSGLVVYSL-DGKML--------------HSY-N--TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIE 102 (355)
T ss_dssp CEEEEEETTTEEEEEET-TSCEE--------------EEE-C--CSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEE
T ss_pred cEEEEEcCCCCEEEEcC-CCcEE--------------EEc-c--CCCcccEEEecccccCCceEeEEEEeCCCCCCCeEE
Confidence 45666677889999999 56522 111 1 12344444444 232 3333 3 3 57899
Q ss_pred EEEcCCCCCCCCccCCccccccCCCcceeeCC-----cCCceeeeEEEe-cC-CCc-EEEEeccCCeEEEEecc------
Q 021160 117 LFEKNMGLGPSPLSLSPEDLQKREEPQVYSGH-----RNSQTVKGVNFF-GP-NDE-YVMSGSDCGHLFIWKKK------ 182 (316)
Q Consensus 117 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~i~~~~~~-~~-~~~-~l~~~~~dg~v~~wd~~------ 182 (316)
+|++.... ..+..+... .....+..++++ ++ .+. ++++...+|.+..|++.
T Consensus 103 vf~iDp~~---------------~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~ 167 (355)
T 3amr_A 103 IYAIDGKN---------------GTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGY 167 (355)
T ss_dssp EEEECTTT---------------CCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSC
T ss_pred EEEECCCC---------------CceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCc
Confidence 99874221 122222110 110226666653 34 343 67778888999999983
Q ss_pred -CCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCC-----C-CCCCC-CCcc-cceeeeec-CCCCc-ee
Q 021160 183 -GGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPT-----D-FPPLP-DNAE-KIMKANKQ-GREDH-SR 251 (316)
Q Consensus 183 -~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~-----~-~~~~~-~~~~-~~~~~~~~-~~~~~-~~ 251 (316)
+.+.++++... +.+-.++..+....|..+-++.-|..++.+.. + +..+. ++.. .+-.++.. ..++. ++
T Consensus 168 ~~~~lVR~f~lg-sq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyL 246 (355)
T 3amr_A 168 ISGKKVRAFKMN-SQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYL 246 (355)
T ss_dssp EEEEEEEEEECS-SCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEE
T ss_pred ccceEEEEecCC-CCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEE
Confidence 34667777643 56788889998888999988866666664422 1 11111 1111 22222222 23333 45
Q ss_pred EEec-CCCeEEEEEec
Q 021160 252 ITLT-PDVIMHVLRLQ 266 (316)
Q Consensus 252 ~s~~-~d~~~~~w~~~ 266 (316)
+..+ .+..+.+++.+
T Consensus 247 ivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 247 MASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EEEEGGGTEEEEEESS
T ss_pred EEEcCCCCEEEEEECC
Confidence 4444 67899999986
No 334
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=94.01 E-value=2.1 Score=35.09 Aligned_cols=107 Identities=18% Similarity=0.222 Sum_probs=57.9
Q ss_pred cEEEEEEccCCC-eEEEecCCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCC---CcEEEE
Q 021160 94 HITGLAYSNTSE-LLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPN---DEYVMS 169 (316)
Q Consensus 94 ~i~~~~~~~~~~-~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~l~~ 169 (316)
....|+|.|+|+ ++++...+.|++++....... ...+ ....+..... ....+++ +|+ +..|..
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~-----~~~~-----~~~v~~~g~~--g~~gia~-~pdf~~~g~lYv 85 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAGKGLSA-----PLSG-----VPDVWAHGQG--GLLDVVL-APDFAQSRRIWL 85 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETTTEECC-----CCBS-----CCCCCCSTTC--SEEEEEE-CTTHHHHCEEEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCCCceee-----EecC-----CcccccCCCC--CceeEEE-CCCCCCCCEEEE
Confidence 467899999999 888877899999985432000 0000 0001111122 2788998 885 444443
Q ss_pred e-cc-------CCeEEEEeccCC--ee--EEE----eec---CccceEEEEEcCCCCeEEEEe
Q 021160 170 G-SD-------CGHLFIWKKKGG--KL--VRL----MVG---DRHVVNQLEPHPHIPMFATCG 213 (316)
Q Consensus 170 ~-~~-------dg~v~~wd~~~~--~~--~~~----~~~---~~~~v~~~~~~p~~~~l~s~~ 213 (316)
. +. ...|..+++... +. ... +.. .......++|.|++.+.++.+
T Consensus 86 ~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 148 (353)
T 2g8s_A 86 SYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALG 148 (353)
T ss_dssp EEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEEC
T ss_pred EEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEEC
Confidence 3 22 235666666432 11 111 111 111235799999997766544
No 335
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=93.25 E-value=1.8 Score=35.35 Aligned_cols=51 Identities=14% Similarity=-0.046 Sum_probs=25.8
Q ss_pred eEEEEeccCCe--eEEEeecCccceEEEEEcCCCCeEEEEeCCC------cEEEecCCCCC
Q 021160 175 HLFIWKKKGGK--LVRLMVGDRHVVNQLEPHPHIPMFATCGIEK------TVKLWAPMPTD 227 (316)
Q Consensus 175 ~v~~wd~~~~~--~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~------~i~iwd~~~~~ 227 (316)
.+.+||+.+.+ .+..++.....-.++ ..++++++.|+.++ .|.++++++++
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~--~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~ 344 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGRAYGVSL--PWNNSLLIIGGETAGGKAVTDSVLITVKDNK 344 (357)
T ss_dssp CCEEEECC---CEEEEECSSCCBSSEEE--EETTEEEEEEEECGGGCEEEEEEEEEC-CCS
T ss_pred eEEEEecCCCceeeCCCCCCCcccceeE--EeCCEEEEEeeeCCCCCEeeeEEEEEEcCcE
Confidence 47788987654 333343222222222 23667777777543 35556777776
No 336
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=92.39 E-value=6.5 Score=35.99 Aligned_cols=190 Identities=13% Similarity=0.099 Sum_probs=100.0
Q ss_pred cceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEecCCc
Q 021160 35 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDEL 114 (316)
Q Consensus 35 ~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d~~ 114 (316)
..|.++....++ .|..|+.+| +..||..+.+... . . ......|.++.. .+|.+.+++.+ -
T Consensus 63 ~~i~~i~~d~~g--~lWigT~~G-l~~yd~~~~~f~~------------~--~-~~~~~~i~~i~~-~~g~lWigt~~-G 122 (758)
T 3ott_A 63 TRIYCGVIIDNT--YLYMGTDNG-ILVYNYRADRYEQ------------P--E-TDFPTDVRTMAL-QGDTLWLGALN-G 122 (758)
T ss_dssp SCEEEEEEETTT--EEEEEETTE-EEEEETTTTEECC------------C--S-CCCCSCEEEEEE-ETTEEEEEETT-E
T ss_pred ceEEEEEEcCCC--cEEEEeCCC-eEEEeCCCCEEEC------------c--c-cCCCceEEEEEe-cCCcEEEEcCC-c
Confidence 468888887766 555666554 7889988765211 0 0 111234666654 46666665544 6
Q ss_pred EEEEEcCCCCCCCCccCCccccccCCCcceee---CCcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCCeeEEEe-
Q 021160 115 VYLFEKNMGLGPSPLSLSPEDLQKREEPQVYS---GHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLM- 190 (316)
Q Consensus 115 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~- 190 (316)
+..+|..+. ....+. .......|.++.. ..++.+.+ |+.. -+..++..+++.....
T Consensus 123 l~~~~~~~~-----------------~~~~~~~~~~~l~~~~i~~i~~-d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~ 182 (758)
T 3ott_A 123 LYTYQLQSR-----------------KLTSFDTRRNGLPNNTIYSIIR-TKDNQIYV-GTYN-GLCRYIPSNGKFEGIPL 182 (758)
T ss_dssp EEEEETTTC-----------------CEEEECHHHHCCSCSCEEEEEE-CTTCCEEE-EETT-EEEEEETTTTEEEEECC
T ss_pred ceeEeCCCC-----------------eEEEeccCCCCcCCCeEEEEEE-cCCCCEEE-EeCC-CHhhCccCCCceEEecC
Confidence 888887654 222221 0011123777776 66666554 4544 5778888776643211
Q ss_pred ecC----ccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCCCCCCCCC-cccceeeeecCCCCceeEEecCCCeEEEEEe
Q 021160 191 VGD----RHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDN-AEKIMKANKQGREDHSRITLTPDVIMHVLRL 265 (316)
Q Consensus 191 ~~~----~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~ 265 (316)
... ...|.++...+++..|-.|.. +-+..++..+++...+... ...+..+. ...++.+.+. +.+| +.+++.
T Consensus 183 ~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~-~d~~g~lWig-T~~G-l~~~~~ 258 (758)
T 3ott_A 183 PVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLA-LDGNGDLLAG-TDNG-LYVYHN 258 (758)
T ss_dssp CCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEE-ECTTCCEEEE-ETTE-EEEECC
T ss_pred CCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEE-EcCCCCEEEE-eCCc-eeEEec
Confidence 111 124788888777664333443 4577888776543222111 12232332 3334544444 3444 556665
Q ss_pred ccc
Q 021160 266 QRR 268 (316)
Q Consensus 266 ~~~ 268 (316)
.+.
T Consensus 259 ~~~ 261 (758)
T 3ott_A 259 DTT 261 (758)
T ss_dssp TTS
T ss_pred CCC
Confidence 443
No 337
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=91.45 E-value=8 Score=35.09 Aligned_cols=148 Identities=14% Similarity=0.188 Sum_probs=75.9
Q ss_pred CCCcEEEEEecC------CcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEE-ecC--CcE
Q 021160 45 RNPNYFAVGGSD------EYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLIS-YND--ELV 115 (316)
Q Consensus 45 ~~~~~l~~g~~d------g~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s-~~d--~~i 115 (316)
++ .+++.|+.+ ..+.+||+.+.++......+ .....| +++...++++++. |.+ +.+
T Consensus 451 ~~-~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p---------~~R~~h-----~~~~~~~~~iyv~GG~~~~~~v 515 (695)
T 2zwa_A 451 NN-QLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLS---------HTRFRH-----SACSLPDGNVLILGGVTEGPAM 515 (695)
T ss_dssp TT-EEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCS---------BCCBSC-----EEEECTTSCEEEECCBCSSCSE
T ss_pred CC-EEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCC---------CCcccc-----eEEEEcCCEEEEECCCCCCCCE
Confidence 55 788888754 35788999887654321100 000111 2233236776655 432 278
Q ss_pred EEEEcCCCCCCCCccCCccccccCCCcceeeC------CcCCceeeeEEEecCC-CcEEEEecc--C-----CeEEEEec
Q 021160 116 YLFEKNMGLGPSPLSLSPEDLQKREEPQVYSG------HRNSQTVKGVNFFGPN-DEYVMSGSD--C-----GHLFIWKK 181 (316)
Q Consensus 116 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~i~~~~~~~~~-~~~l~~~~~--d-----g~v~~wd~ 181 (316)
.+||..+.. ...+.. .... ...+.+ ..+ +.+++.|+. + ..+..||+
T Consensus 516 ~~yd~~t~~-----------------W~~~~~~g~~p~~r~~--~~a~v~-~~~~~~iyv~GG~~~~~~~~~~~v~~yd~ 575 (695)
T 2zwa_A 516 LLYNVTEEI-----------------FKDVTPKDEFFQNSLV--SAGLEF-DPVSKQGIILGGGFMDQTTVSDKAIIFKY 575 (695)
T ss_dssp EEEETTTTE-----------------EEECCCSSGGGGSCCB--SCEEEE-ETTTTEEEEECCBCTTSSCBCCEEEEEEE
T ss_pred EEEECCCCc-----------------eEEccCCCCCCCcccc--eeEEEE-eCCCCEEEEECCcCCCCCeeeCcEEEEEc
Confidence 999987651 111111 1111 223444 333 667777765 2 46889998
Q ss_pred cCCee-----EEEeec---CccceEEEEEcCCCCeEEEEeCC--------CcEEEecCCCCC
Q 021160 182 KGGKL-----VRLMVG---DRHVVNQLEPHPHIPMFATCGIE--------KTVKLWAPMPTD 227 (316)
Q Consensus 182 ~~~~~-----~~~~~~---~~~~v~~~~~~p~~~~l~s~~~d--------~~i~iwd~~~~~ 227 (316)
.+.+- -..+.. ....-.+++...++++++.|+.+ ..+.+||+.+.+
T Consensus 576 ~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~ 637 (695)
T 2zwa_A 576 DAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSET 637 (695)
T ss_dssp CTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTE
T ss_pred cCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCe
Confidence 87761 112211 11111123333336677777643 458888888766
No 338
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=91.25 E-value=4.8 Score=32.19 Aligned_cols=137 Identities=8% Similarity=0.002 Sum_probs=73.6
Q ss_pred EEccCCCeEEEec-----CCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEecc-
Q 021160 99 AYSNTSELLISYN-----DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSD- 172 (316)
Q Consensus 99 ~~~~~~~~l~s~~-----d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~- 172 (316)
.|+++++.|+-.. ...|+..++... ..+.+..+. + .++ +++++.|+-.+.
T Consensus 110 ~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs-----------------~~~~lt~~~----~--~~~-~~~g~~iy~t~~g 165 (302)
T 3s25_A 110 YASLIGNYIYYLHYDTQTATSLYRIRIDGE-----------------EKKKIKNHY----L--FTC-NTSDRYFYYNNPK 165 (302)
T ss_dssp EEEEETTEEEEEEESSSSCEEEEEEETTSC-----------------CCEEEESSC----C--CCS-EEETTEEEEECTT
T ss_pred EEEEeCCEEEEEeecCCCCceEEEEECCCC-----------------CeEEEeCCC----c--eEe-eEECCEEEEEeCC
Confidence 6777887555432 445666666543 334444332 2 234 567777775554
Q ss_pred CCeEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCC--CcEEEecCCCCCCCCCCCCcccceeeeecCCCCce
Q 021160 173 CGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIE--KTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHS 250 (316)
Q Consensus 173 dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d--~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (316)
...|...++..+.....+.+ ... ..++|++.+|+-.... ..|..-++.+.....+.... + .++.+.+..
T Consensus 166 ~~~Iy~~~l~g~~~~~l~~~---~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~Lt~~~--~---~~~~~~g~~ 236 (302)
T 3s25_A 166 NGQLYRYDTASQSEALFYDC---NCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNPVVLTEAN--I---EHYNVYGSL 236 (302)
T ss_dssp TCCEEEEETTTTEEEEEECS---CEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCCEECSCSC--E---EEEEEETTE
T ss_pred CceEEEEECCCCCEEEEeCC---Ccc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCeEEEeCCC--c---ceEEECCCE
Confidence 67888888876654433332 222 3466988887765433 35666677666544443221 1 234555555
Q ss_pred eEEe--cCCCeEEEEEeccc
Q 021160 251 RITL--TPDVIMHVLRLQRR 268 (316)
Q Consensus 251 ~~s~--~~d~~~~~w~~~~~ 268 (316)
+.-. .....|...++...
T Consensus 237 Iy~~~~~~~~~i~~~~~DG~ 256 (302)
T 3s25_A 237 IFYQRGGDNPALCVVKNDGT 256 (302)
T ss_dssp EEEEECSSSCEEEEEETTSC
T ss_pred EEEEECCCCcEEEEEECCCC
Confidence 5433 22345555555443
No 339
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=91.17 E-value=8.9 Score=35.08 Aligned_cols=171 Identities=12% Similarity=0.042 Sum_probs=93.9
Q ss_pred cceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccC-CCcccEEEEEEccCCCeEEEecCC
Q 021160 35 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIG-KNNIHITGLAYSNTSELLISYNDE 113 (316)
Q Consensus 35 ~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~s~~d~ 113 (316)
..|.++.-.+++ .+ -.|+ ++.|..||..+++... +....... .....|.++.-.++|++.+++..+
T Consensus 373 ~~v~~i~~d~~g-~l-Wigt-~~GL~~~~~~~~~~~~----------~~~~~~~~~~~~~~v~~i~~d~~g~lWigT~~~ 439 (758)
T 3ott_A 373 NRIRHIYEDKEQ-QL-WIAT-DGSINRYDYATRQFIH----------YNIVDNTGTYNTNWTYYIFEDTAGQLWISTCLG 439 (758)
T ss_dssp SCEEEEEECTTS-CE-EEEE-TTEEEEEETTTTEEEE----------EEEECCC--CBSSSEEEEEECTTSEEEEEESSS
T ss_pred CceEEEEECCCC-CE-EEEe-CCcHhhcCcCCCcEEE----------eecCCCcCCCCCceEEEEEEcCCCCEEEEECCC
Confidence 358888888877 43 3455 4579999988765311 11000000 013458888888888877776666
Q ss_pred cEEEEEcCCCCCCCCccCCccccccCCCcceeeCC--cCCceeeeEEEecCCCcEEEE-eccCCeEEEEeccCCeeEEEe
Q 021160 114 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGH--RNSQTVKGVNFFGPNDEYVMS-GSDCGHLFIWKKKGGKLVRLM 190 (316)
Q Consensus 114 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~l~~-~~~dg~v~~wd~~~~~~~~~~ 190 (316)
-|.++|..+........ + .....+... .....|.++.. ..+|.+.+. ++. +-+..+|..+++.....
T Consensus 440 Gl~~~~~~~~~~~~~~~-----~---~~~~~~~~~~~l~~~~i~~i~~-d~~g~lWi~~~t~-~Gl~~~d~~~~~~~~~~ 509 (758)
T 3ott_A 440 GIFVVDKHKLMQSTSGQ-----Y---IAEQNYSVHNGLSGMFINQIIP-DNEGNVWVLLYNN-KGIDKINPRTREVTKLF 509 (758)
T ss_dssp CEEEEEHHHHHHCCSSE-----E---ECSEEECGGGTCSCSCEEEEEE-CTTSCEEEEETTC-SSEEEEETTTTEEEEEC
T ss_pred ceEEEccccccccCCcc-----e---ecccccccccccccceeeeEEE-cCCCCEEEEccCC-CCcEEEeCCCCceEEec
Confidence 68888865310000000 0 000011100 01123888877 778887663 444 45788898877654332
Q ss_pred ec---CccceEEEEEcCCCCeEEEEeCCCcEEEecCCCCCCCC
Q 021160 191 VG---DRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPP 230 (316)
Q Consensus 191 ~~---~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~~~~ 230 (316)
.. ....+.++....++.+.+. +.. -+..++..+.....
T Consensus 510 ~~~~~~~~~~~~i~~d~~g~lWig-t~~-Gl~~~~~~~~~~~~ 550 (758)
T 3ott_A 510 ADELTGEKSPNYLLCDEDGLLWVG-FHG-GVMRINPKDESQQS 550 (758)
T ss_dssp TTTSCGGGCEEEEEECTTSCEEEE-ETT-EEEEECC--CCCCB
T ss_pred CCCcCCCcccceEEECCCCCEEEE-ecC-ceEEEecCCCceEE
Confidence 11 1245778888888877544 334 48888987766433
No 340
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=89.70 E-value=7.4 Score=31.84 Aligned_cols=71 Identities=11% Similarity=0.052 Sum_probs=46.2
Q ss_pred eeeEEEecCCCcEEEEeccCCeEEEEeccCCeeE--EEee----cCccceEEEEEcCC----CCeEEEE--eCCCcEEEe
Q 021160 154 VKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLV--RLMV----GDRHVVNQLEPHPH----IPMFATC--GIEKTVKLW 221 (316)
Q Consensus 154 i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~--~~~~----~~~~~v~~~~~~p~----~~~l~s~--~~d~~i~iw 221 (316)
.+.++| .|+|.++++--..|.|++++...++.. ..+. ........|+++|+ +.+.++- ..+..|.-|
T Consensus 34 P~~ia~-~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~ 112 (347)
T 3das_A 34 PWGLAP-LPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRM 112 (347)
T ss_dssp EEEEEE-CTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEE
T ss_pred ceEEEE-cCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEE
Confidence 789999 899998777766899999987666532 2221 22456789999995 4333332 234455556
Q ss_pred cCCC
Q 021160 222 APMP 225 (316)
Q Consensus 222 d~~~ 225 (316)
.+..
T Consensus 113 ~~~~ 116 (347)
T 3das_A 113 LYDE 116 (347)
T ss_dssp EBCT
T ss_pred EeCC
Confidence 5544
No 341
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=88.40 E-value=11 Score=33.16 Aligned_cols=111 Identities=6% Similarity=-0.076 Sum_probs=64.9
Q ss_pred EEEEEEccCCCeEEE-e-cCCcEEEEEcCCCCCCCCccCCccccccCCCcceee-CCcCCceeeeEEEecCCCcEEEEec
Q 021160 95 ITGLAYSNTSELLIS-Y-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYS-GHRNSQTVKGVNFFGPNDEYVMSGS 171 (316)
Q Consensus 95 i~~~~~~~~~~~l~s-~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~l~~~~ 171 (316)
...+..+|+|++++. + .+.++.++|++......... +. ++...+. ...-.-.....+| .++|....+-.
T Consensus 325 PHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k-----~~--~~~~~~~ae~e~GlGPlHt~F-d~~G~aYTtlf 396 (638)
T 3sbq_A 325 PHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGK-----LA--DPRDVIVGEPELGLGPLHTTF-DGRGNAYTTLF 396 (638)
T ss_dssp CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTC-----CS--CGGGGEEECCBCCSCEEEEEE-CSSSEEEEEET
T ss_pred CcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhcc-----cc--CcccceEeeccCCCcccEEEE-CCCCceEeeee
Confidence 446789999997766 4 48999999997531000000 00 0001111 1111122678888 88996666777
Q ss_pred cCCeEEEEeccCC----------eeEEEeecCccceEEE-----EEcCCCCeEEEEe
Q 021160 172 DCGHLFIWKKKGG----------KLVRLMVGDRHVVNQL-----EPHPHIPMFATCG 213 (316)
Q Consensus 172 ~dg~v~~wd~~~~----------~~~~~~~~~~~~v~~~-----~~~p~~~~l~s~~ 213 (316)
-|..|..|++... ..+..+.-|-.+-... .-.|+|++|++.+
T Consensus 397 idSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 397 IDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp TTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEE
T ss_pred ecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEec
Confidence 8999999998643 3455565554332211 2357888887764
No 342
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=88.06 E-value=9.4 Score=30.97 Aligned_cols=53 Identities=6% Similarity=-0.172 Sum_probs=26.4
Q ss_pred CeEEEEeccCCeeE--EEeecCccceEEEEEcCCCCeEEEEeC------CCcEEEecC--CCCC
Q 021160 174 GHLFIWKKKGGKLV--RLMVGDRHVVNQLEPHPHIPMFATCGI------EKTVKLWAP--MPTD 227 (316)
Q Consensus 174 g~v~~wd~~~~~~~--~~~~~~~~~v~~~~~~p~~~~l~s~~~------d~~i~iwd~--~~~~ 227 (316)
..+.+||+.+.+-. ..++.....-.+++.. ++++++.|+. ...+.+||+ .+..
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~ 230 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLK 230 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CE
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCc
Confidence 57899998876533 2332111110223332 5566666653 235777776 4443
No 343
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=86.84 E-value=14 Score=31.54 Aligned_cols=105 Identities=10% Similarity=0.133 Sum_probs=59.1
Q ss_pred cEEEEEEccCCCeEEEecC-CcEEEEEcCCCCCCCCccCCccccccCCCcceeeC----CcCCceeeeEEEecCC---Cc
Q 021160 94 HITGLAYSNTSELLISYND-ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSG----HRNSQTVKGVNFFGPN---DE 165 (316)
Q Consensus 94 ~i~~~~~~~~~~~l~s~~d-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~~~~~~~~~---~~ 165 (316)
..+.|+|.|+|+++++... +.|++++...+.. ..+..+.. ......+..|+| +|+ +.
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~--------------~~~~~~~~~~~~~~g~~Gllgia~-~Pdf~~~g 92 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSV--------------KTVFQVPEIVNDADGQNGLLGFAF-HPDFKNNP 92 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCE--------------EEEEECTTCCCCTTSSCSEEEEEE-CTTTTTSC
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcE--------------eEEecCCccccccCCCCceeEEEE-CCCcCcCC
Confidence 4579999999999998765 4688887654310 01111111 011123789999 884 44
Q ss_pred EEEEe-cc------------CCeEEEEeccCC--e-----eEE-Eeec-CccceEEEEEcCCCCeEEEEe
Q 021160 166 YVMSG-SD------------CGHLFIWKKKGG--K-----LVR-LMVG-DRHVVNQLEPHPHIPMFATCG 213 (316)
Q Consensus 166 ~l~~~-~~------------dg~v~~wd~~~~--~-----~~~-~~~~-~~~~v~~~~~~p~~~~l~s~~ 213 (316)
.|... +. ...|.-++...+ + .+. .+.. .......|+|.|++.+.++.+
T Consensus 93 ~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 93 YIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp EEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred EEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 44443 32 235666665432 1 111 1221 123468899999998866654
No 344
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=86.35 E-value=15 Score=31.45 Aligned_cols=28 Identities=18% Similarity=0.216 Sum_probs=23.0
Q ss_pred cEEEEEEccCCC--eEEEecCCcEEEEEcC
Q 021160 94 HITGLAYSNTSE--LLISYNDELVYLFEKN 121 (316)
Q Consensus 94 ~i~~~~~~~~~~--~l~s~~d~~i~iwd~~ 121 (316)
.-+.|+|.|+|. +|++-..|.|++++..
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~ 44 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPE 44 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTT
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCC
Confidence 457899999985 8888889999999754
No 345
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=86.24 E-value=13 Score=33.63 Aligned_cols=25 Identities=20% Similarity=0.384 Sum_probs=19.0
Q ss_pred CCCcEEEEEecCC--cEEEEeCcCCccc
Q 021160 45 RNPNYFAVGGSDE--YARVYDIRKCHWY 70 (316)
Q Consensus 45 ~~~~~l~~g~~dg--~v~~wd~~~~~~~ 70 (316)
++ .+++.|+.++ .+.+||+.+.++.
T Consensus 500 ~~-~iyv~GG~~~~~~v~~yd~~t~~W~ 526 (695)
T 2zwa_A 500 DG-NVLILGGVTEGPAMLLYNVTEEIFK 526 (695)
T ss_dssp TS-CEEEECCBCSSCSEEEEETTTTEEE
T ss_pred CC-EEEEECCCCCCCCEEEEECCCCceE
Confidence 55 7888887654 7899999987754
No 346
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=84.75 E-value=11 Score=35.54 Aligned_cols=38 Identities=13% Similarity=-0.029 Sum_probs=32.3
Q ss_pred eeeeEEEecCCCcEEEEeccCCeEEEEeccCCeeEEEee
Q 021160 153 TVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMV 191 (316)
Q Consensus 153 ~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~ 191 (316)
.+.+++. .++..++++-+.|+++|+|++.+++++.+..
T Consensus 237 ~~~~~~~-~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIF-LSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEE-ETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEee-cCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 3667776 7788899999999999999999999987653
No 347
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=83.62 E-value=0.84 Score=37.27 Aligned_cols=107 Identities=9% Similarity=0.110 Sum_probs=62.1
Q ss_pred CcEEEEeccCCeEEEEeccCCeeEEEeecCc-cceEEEEEc--C-CCCeEEEE-eCCCcEEEecCCCCCCCCCCCCcccc
Q 021160 164 DEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR-HVVNQLEPH--P-HIPMFATC-GIEKTVKLWAPMPTDFPPLPDNAEKI 238 (316)
Q Consensus 164 ~~~l~~~~~dg~v~~wd~~~~~~~~~~~~~~-~~v~~~~~~--p-~~~~l~s~-~~d~~i~iwd~~~~~~~~~~~~~~~~ 238 (316)
+.+++.++.||.|+-+|..+|+..-.+.... .++....-. + ++..++.. ..||.|..++..++... .+-.....
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~-~~~~~~~l 88 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQK-LPLSIRQL 88 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEE-EEEEHHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEE-eeeccccc
Confidence 4578899999999999999999988886531 222221100 1 22233333 57899988887765311 11000000
Q ss_pred eeee-ec------------CCCCceeEEecCCCeEEEEEecccCcc
Q 021160 239 MKAN-KQ------------GREDHSRITLTPDVIMHVLRLQRRQTL 271 (316)
Q Consensus 239 ~~~~-~~------------~~~~~~~~s~~~d~~~~~w~~~~~~~~ 271 (316)
.... .. ...+..+.+++.++.+...|+.+++..
T Consensus 89 v~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~ 134 (339)
T 2be1_A 89 VSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEII 134 (339)
T ss_dssp HTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEE
T ss_pred eeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEE
Confidence 0000 00 013456788888998888888877543
No 348
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=79.36 E-value=43 Score=31.68 Aligned_cols=32 Identities=3% Similarity=0.028 Sum_probs=28.0
Q ss_pred ceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC
Q 021160 196 VVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD 227 (316)
Q Consensus 196 ~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~ 227 (316)
.+.+++..++..++++-+.|+++|+|++.+++
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~ 268 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQ 268 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCC
Confidence 56778888888899999999999999998875
No 349
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=78.42 E-value=51 Score=32.00 Aligned_cols=118 Identities=10% Similarity=0.012 Sum_probs=65.2
Q ss_pred cceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCC------CeEE
Q 021160 35 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTS------ELLI 108 (316)
Q Consensus 35 ~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------~~l~ 108 (316)
..|...+.+. .+++.++ .+.+.++.+..+++. ......+ ...|.|+++.|.. .+++
T Consensus 514 ~~I~~As~n~---~~vvva~-g~~l~~fel~~~~L~----------~~~~~~l----~~evscl~i~~~~~~~~~s~~~a 575 (1158)
T 3ei3_A 514 KNISVASCNS---SQVVVAV-GRALYYLQIHPQELR----------QISHTEM----EHEVACLDITPLGDSNGLSPLCA 575 (1158)
T ss_dssp CCCCEEEECS---SEEEEEE-TTEEEEEEEETTEEE----------EEEEEEC----SSCEEEEECCCCSSSTTCCSEEE
T ss_pred CEEEEEEeCC---CEEEEEE-CCEEEEEEeeCCcee----------eecccCC----CCceEEEEeecCCCCcccccEEE
Confidence 3566666653 3455554 577888877755421 1111111 4468999987632 4666
Q ss_pred Ee-c-CCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEe-cCCCcEEEEeccCCeEEEEec--cC
Q 021160 109 SY-N-DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFF-GPNDEYVMSGSDCGHLFIWKK--KG 183 (316)
Q Consensus 109 s~-~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~l~~~~~dg~v~~wd~--~~ 183 (316)
.+ . |++++|+++... ..+....-... ....++.+. -....+|..|-.||.+..+.+ .+
T Consensus 576 Vg~~~d~tv~I~sL~~l----------------~~~~~~~L~~~-~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~t 638 (1158)
T 3ei3_A 576 IGLWTDISARILKLPSF----------------ELLHKEMLGGE-IIPRSILMTTFESSHYLLCALGDGALFYFGLNIET 638 (1158)
T ss_dssp EEETTTTEEEEEETTTC----------------CEEEEEECCSS-CCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTT
T ss_pred EEECCCCEEEEEECCCC----------------CeEEEEECCCC-CCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCC
Confidence 64 4 999999999754 22221111110 113333331 123467889999999865554 45
Q ss_pred CeeE
Q 021160 184 GKLV 187 (316)
Q Consensus 184 ~~~~ 187 (316)
|++.
T Consensus 639 g~l~ 642 (1158)
T 3ei3_A 639 GLLS 642 (1158)
T ss_dssp CCEE
T ss_pred Cccc
Confidence 5543
No 350
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=76.87 E-value=13 Score=35.88 Aligned_cols=37 Identities=11% Similarity=-0.052 Sum_probs=31.2
Q ss_pred eeeEEEecCCCcEEEEeccCCeEEEEeccCCeeEEEee
Q 021160 154 VKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMV 191 (316)
Q Consensus 154 i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~ 191 (316)
+.+++. .++..++++-+.|+++|+|++.+++++.+..
T Consensus 240 ~vs~~~-~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 240 IISMIF-LSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp BSCCEE-ETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eEEeec-cCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 555565 6788899999999999999999999987753
No 351
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=76.69 E-value=25 Score=27.57 Aligned_cols=182 Identities=12% Similarity=0.109 Sum_probs=90.3
Q ss_pred ceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEecCCcE
Q 021160 36 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDELV 115 (316)
Q Consensus 36 ~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d~~i 115 (316)
.|..++..... .++. . ||.|..|-........ .+..+ ...|..++......+++ . |+.|
T Consensus 64 ~i~~ia~G~~h--s~~l-~-~G~v~~wG~n~~Gqlg-----------~P~~~----~~~v~~ia~G~~hs~al-~-~G~v 122 (282)
T 3qhy_B 64 GVDAIAAGNYH--SLAL-K-DGEVIAWGGNEDGQTT-----------VPAEA----RSGVDAIAAGAWASYAL-K-DGKV 122 (282)
T ss_dssp CCCEEEECSSE--EEEE-E-TTEEEEEECCTTSTTC-----------CCGGG----SSSEEEEEEETTEEEEE-E-TTEE
T ss_pred CEEEEEeCCCE--EEEE-E-CCEEEEeeCCCCCCCC-----------CCccc----CCCeEEEECcCCEEEEE-e-CCeE
Confidence 56677766533 3343 4 8999998866432110 01111 23577776554433333 4 9999
Q ss_pred EEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccC-CeeEEEeecCc
Q 021160 116 YLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKG-GKLVRLMVGDR 194 (316)
Q Consensus 116 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~-~~~~~~~~~~~ 194 (316)
+.|-..... .+-.-.... ..|..++. ..... ++ -. +|.|+.|-... +++- .-..-.
T Consensus 123 ~~wG~n~~g----------------qlg~~~~~~--~~i~~i~~-G~~~~-~~-l~-~G~v~~wG~n~~gqlg-~p~~~~ 179 (282)
T 3qhy_B 123 IAWGDDSDG----------------QTTVPAEAQ--SGVTALDG-GVYTA-LA-VK-NGGVIAWGDNYFGQTT-VPAEAQ 179 (282)
T ss_dssp EEEECCTTS----------------TTSCCGGGG--SSEEEEEE-CSSEE-EE-EE-TTEEEEEECCTTSTTS-CCGGGG
T ss_pred EEecCCCCC----------------cCCCCccCC--CCeEEEEc-ccCEE-EE-EE-CCEEEEecCCCCCCCC-CceecC
Confidence 999765431 110000111 22777765 33332 22 23 79999997653 2221 101112
Q ss_pred cceEEEEEcCCCCeEEEEeCCCcEEEecCCCCCCCCCCC-CcccceeeeecCCCCceeEEecCCCeEEEEEeccc
Q 021160 195 HVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPD-NAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR 268 (316)
Q Consensus 195 ~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~ 268 (316)
..|..++.-... .++. .||.|+.|-....-...++. ....+..+. ......+... |+.+..|-....
T Consensus 180 ~~v~~i~~G~~h-s~al--~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~---~G~~h~~al~-~g~v~~wG~n~~ 247 (282)
T 3qhy_B 180 SGVDDVAGGIFH-SLAL--KDGKVIAWGDNRYKQTTVPTEALSGVSAIA---SGEWYSLALK-NGKVIAWGSSRT 247 (282)
T ss_dssp SSEEEEEECSSE-EEEE--ETTEEEEEECCTTSTTCCCGGGGSSCCEEE---ECSSCEEEEE-TTEEEEESTTCC
T ss_pred CCeEEEEecCCE-EEEE--ECCeEEEEECCCCCCCCCCcccCCCceEEE---cCCCEEEEEE-CCEEEEecCCCC
Confidence 457777664332 2444 49999999755432111211 112222222 2223444444 999999965443
No 352
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=76.30 E-value=36 Score=29.09 Aligned_cols=124 Identities=10% Similarity=0.096 Sum_probs=62.0
Q ss_pred ceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccC----CCcccEEEEEEccC----CCeE
Q 021160 36 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIG----KNNIHITGLAYSNT----SELL 107 (316)
Q Consensus 36 ~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~~~~~~----~~~l 107 (316)
.-..|+|.|++...++++...|.|++++...... ..++..+. ..+.. ........|+|+|+ +.++
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~------~~~~~~~~-~~~~~g~~~~~e~Gllgia~~P~f~~n~~lY 87 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIF------KEPYLDIH-KLVQSGIKGGDERGLLSLAFHPNYKKNGKLY 87 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBC------SSCSEECT-TTBCCCCSSSCCCSEEEEEECTTHHHHCEEE
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCee------eeeecCCc-ceeccCccccCCCcceeeEeCCCCcCCCEEE
Confidence 3578999999832455667889999997542210 01111111 01111 12456889999996 4455
Q ss_pred EE-ec--CC----------cEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEeccC
Q 021160 108 IS-YN--DE----------LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDC 173 (316)
Q Consensus 108 ~s-~~--d~----------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d 173 (316)
++ +. ++ .|.-|.+..... ..+ ++...+.+..+...........|+| .|||.+.++.++.
T Consensus 88 v~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~---~~~---d~~~~~~i~~~~~~~~~H~g~~l~f-gpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 88 VSYTTNQERWAIGPHDHILRVVEYTVSRKNP---HQV---DLRTARVFLEVAELHRKHLGGQLLF-GPDGFLYIILGDG 159 (463)
T ss_dssp EEEEECCCSSCSSSSCEEEEEEEEEBCTTCT---TSB---CGGGCEEEEEEEESSSSSCEEEEEE-CTTSCEEEEECCT
T ss_pred EEEeCCCCCcccCCcccceEEEEEEEcCCCC---Ccc---CCCCceEEEEcCCCCCcccCCcEeE-CCCCcEEEEeCCC
Confidence 54 32 21 355566543210 000 0111111112211111122678998 9999877765543
No 353
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=74.73 E-value=29 Score=27.25 Aligned_cols=182 Identities=14% Similarity=0.097 Sum_probs=90.8
Q ss_pred ceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEEccCCCeEEEecCCcE
Q 021160 36 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDELV 115 (316)
Q Consensus 36 ~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d~~i 115 (316)
.|..++..... .++. . ||.|..|-........ .|. .....|..++......+++ . |+.|
T Consensus 25 ~i~~ia~G~~h--~~~l-~-~G~v~~wG~n~~Gqlg-----~p~----------~~~~~i~~ia~G~~hs~~l-~-~G~v 83 (282)
T 3qhy_B 25 GVDAIAGGYFH--GLAL-K-GGKVLGWGANLNGQLT-----MPA----------ATQSGVDAIAAGNYHSLAL-K-DGEV 83 (282)
T ss_dssp SCCEEEECSSE--EEEE-E-TTEEEEEECCSSSTTS-----CCG----------GGGSCCCEEEECSSEEEEE-E-TTEE
T ss_pred CCcEEEeCCCe--EEEE-E-CCEEEEEeCCCCCCCC-----CCc----------cCCCCEEEEEeCCCEEEEE-E-CCEE
Confidence 57777776532 3333 4 8999999866432110 010 1123466666544333333 3 8999
Q ss_pred EEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccC-CeeEEEeecCc
Q 021160 116 YLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKG-GKLVRLMVGDR 194 (316)
Q Consensus 116 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~-~~~~~~~~~~~ 194 (316)
+.|-...... +. .+.. + . ..|..++. .... .+.-. +|.|+.|-... +++- .-....
T Consensus 84 ~~wG~n~~Gq-----lg-------~P~~-~---~--~~v~~ia~-G~~h--s~al~-~G~v~~wG~n~~gqlg-~~~~~~ 140 (282)
T 3qhy_B 84 IAWGGNEDGQ-----TT-------VPAE-A---R--SGVDAIAA-GAWA--SYALK-DGKVIAWGDDSDGQTT-VPAEAQ 140 (282)
T ss_dssp EEEECCTTST-----TC-------CCGG-G---S--SSEEEEEE-ETTE--EEEEE-TTEEEEEECCTTSTTS-CCGGGG
T ss_pred EEeeCCCCCC-----CC-------CCcc-c---C--CCeEEEEC-cCCE--EEEEe-CCeEEEecCCCCCcCC-CCccCC
Confidence 9997654310 00 0110 1 1 22777776 4333 33334 89999998654 3321 111123
Q ss_pred cceEEEEEcCCCCeEEEEeCCCcEEEecCCCCCCCCCCCC-cccceeeeecCCCCceeEEecCCCeEEEEEeccc
Q 021160 195 HVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDN-AEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR 268 (316)
Q Consensus 195 ~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~~~d~~~~~w~~~~~ 268 (316)
..|..++.-... .++ -. ||.|..|-....-....+.. ...+..+. ......+.. .++.+..|-....
T Consensus 141 ~~i~~i~~G~~~-~~~-l~-~G~v~~wG~n~~gqlg~p~~~~~~v~~i~---~G~~hs~al-~~G~v~~wG~n~~ 208 (282)
T 3qhy_B 141 SGVTALDGGVYT-ALA-VK-NGGVIAWGDNYFGQTTVPAEAQSGVDDVA---GGIFHSLAL-KDGKVIAWGDNRY 208 (282)
T ss_dssp SSEEEEEECSSE-EEE-EE-TTEEEEEECCTTSTTSCCGGGGSSEEEEE---ECSSEEEEE-ETTEEEEEECCTT
T ss_pred CCeEEEEcccCE-EEE-EE-CCEEEEecCCCCCCCCCceecCCCeEEEE---ecCCEEEEE-ECCeEEEEECCCC
Confidence 456666654332 233 23 79999997654321112211 12232322 222233344 6999999976543
No 354
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=73.09 E-value=33 Score=27.24 Aligned_cols=99 Identities=7% Similarity=-0.067 Sum_probs=52.4
Q ss_pred ecCCCcEEEEeccC--------------CeEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEe----CCCcEEEe
Q 021160 160 FGPNDEYVMSGSDC--------------GHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCG----IEKTVKLW 221 (316)
Q Consensus 160 ~~~~~~~l~~~~~d--------------g~v~~wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~----~d~~i~iw 221 (316)
.++++.+|+-.... ..|+..++..++.. .+... . ...|+|+++.|+-.. ....|+.-
T Consensus 60 i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~-~l~~~--~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~ 134 (302)
T 3s25_A 60 INADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGST-VLDPD--P--CIYASLIGNYIYYLHYDTQTATSLYRI 134 (302)
T ss_dssp EEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCE-EEECS--C--EEEEEEETTEEEEEEESSSSCEEEEEE
T ss_pred EEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcce-EeecC--C--ccEEEEeCCEEEEEeecCCCCceEEEE
Confidence 36788888776543 46777777765533 33221 1 236778888877654 23456666
Q ss_pred cCCCCCCCCCCCCcccceeeeecCCCCceeE-EecCCCeEEEEEeccc
Q 021160 222 APMPTDFPPLPDNAEKIMKANKQGREDHSRI-TLTPDVIMHVLRLQRR 268 (316)
Q Consensus 222 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-s~~~d~~~~~w~~~~~ 268 (316)
++.+.....+..+.. .. +.++++.+. +......|.+.++...
T Consensus 135 ~~dGs~~~~lt~~~~----~~-~~~~g~~iy~t~~g~~~Iy~~~l~g~ 177 (302)
T 3s25_A 135 RIDGEEKKKIKNHYL----FT-CNTSDRYFYYNNPKNGQLYRYDTASQ 177 (302)
T ss_dssp ETTSCCCEEEESSCC----CC-SEEETTEEEEECTTTCCEEEEETTTT
T ss_pred ECCCCCeEEEeCCCc----eE-eeEECCEEEEEeCCCceEEEEECCCC
Confidence 666554443432221 11 334444443 3333455666655443
No 355
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=72.97 E-value=25 Score=31.88 Aligned_cols=36 Identities=19% Similarity=0.278 Sum_probs=29.3
Q ss_pred eeeEEEecCCCcEEEEeccCCeEEEEeccCCeeEEEeec
Q 021160 154 VKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVG 192 (316)
Q Consensus 154 i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~ 192 (316)
|.++.+ +..++++-+.|.++|+|++.+++++....-
T Consensus 224 Is~~~~---~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 224 ISCKLF---HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEE---TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred EEEecc---CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 555544 477999999999999999999998877653
No 356
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=71.51 E-value=28 Score=30.68 Aligned_cols=81 Identities=7% Similarity=0.035 Sum_probs=48.7
Q ss_pred ceEEEEECCCCCcEEEEEecCCcEEEEeCcCCccc-C-CC-CCCCCceecccccccCCCcccEEEEEEccCCCeEEEe-c
Q 021160 36 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWY-S-PI-SSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-N 111 (316)
Q Consensus 36 ~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~-~-~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~ 111 (316)
....+..+|+|...+++|-.+.++.++|+++..-. . .+ .....+. ... .-.......+|.++|....+- -
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~----ae~--e~GlGPlHt~Fd~~G~aYTtlfi 397 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIV----GEP--ELGLGPLHTTFDGRGNAYTTLFI 397 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEE----ECC--BCCSCEEEEEECSSSEEEEEETT
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceE----eec--cCCCcccEEEECCCCceEeeeee
Confidence 44578899999444455557899999999843210 0 00 0000000 011 112345678899999544444 6
Q ss_pred CCcEEEEEcCC
Q 021160 112 DELVYLFEKNM 122 (316)
Q Consensus 112 d~~i~iwd~~~ 122 (316)
|.+|..|++..
T Consensus 398 dSqvvkWni~~ 408 (638)
T 3sbq_A 398 DSQVVKWNMEE 408 (638)
T ss_dssp TTEEEEEEHHH
T ss_pred cceEEEEeccH
Confidence 99999999975
No 357
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=70.56 E-value=23 Score=31.38 Aligned_cols=58 Identities=16% Similarity=0.210 Sum_probs=41.5
Q ss_pred eeeEEEecCCCcEEEEeccC------------CeEEEEeccCCeeEEEeecCc-cceEEEEEcCCCCeEEEE
Q 021160 154 VKGVNFFGPNDEYVMSGSDC------------GHLFIWKKKGGKLVRLMVGDR-HVVNQLEPHPHIPMFATC 212 (316)
Q Consensus 154 i~~~~~~~~~~~~l~~~~~d------------g~v~~wd~~~~~~~~~~~~~~-~~v~~~~~~p~~~~l~s~ 212 (316)
.--|+| ++.|.++++-..+ ..+.+.+..++++.+.+.++. +.++.++|+|+++.|...
T Consensus 478 PDNL~f-d~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGF-DKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEE-CTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEE-CCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 456788 8999866654321 246677777888777776544 689999999999886654
No 358
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=65.51 E-value=57 Score=27.00 Aligned_cols=155 Identities=11% Similarity=0.213 Sum_probs=81.3
Q ss_pred eeEEEEeeCC--CcceEEEeccccccccCCCCccceEEEEEC---CC----CCcEEEEE-ecCCcEEEEeCcCCcccCCC
Q 021160 4 FNMLFDLRSD--SATRLFYCSSFSENSKQPMNSIRLNAIVID---PR----NPNYFAVG-GSDEYARVYDIRKCHWYSPI 73 (316)
Q Consensus 4 ~v~vwd~~~~--~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~---~~----~~~~l~~g-~~dg~v~~wd~~~~~~~~~~ 73 (316)
.|-+|||++. +..+.+.+.... .. ....+..+++. |. + .++... +....|.++|+.+++.....
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~--~~---~~S~l~di~VD~~~~~~~c~~-~~aYItD~~~~gLIVydl~~~~swRv~ 197 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRL--VE---KPTYFGGFAVDVANPKGDCSE-TFVYITNFLRGALFIYDHKKQDSWNVT 197 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGG--CC---CGGGEEEEEEEESCTTTTSCS-EEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred eEEEEECCCCCceeEEEEECCHHh--cc---cCCccceEEEecccCCCCCCc-cEEEEEcCCCCcEEEEECCCCcEEEEc
Confidence 5778999998 766666653211 11 23568888888 22 2 344444 45788999999988633221
Q ss_pred C---CCCCceecccccccCCC----cccEEEEEEccC----CCeEEE-e-cCCcEEEEEc---CCCCCCCCccCCccccc
Q 021160 74 S---SDTPVDTFCPRHLIGKN----NIHITGLAYSNT----SELLIS-Y-NDELVYLFEK---NMGLGPSPLSLSPEDLQ 137 (316)
Q Consensus 74 ~---~~~~~~~~~~~~~~~~~----~~~i~~~~~~~~----~~~l~s-~-~d~~i~iwd~---~~~~~~~~~~~~~~~~~ 137 (316)
. .+.+...+ .+ .+. ...+..++++|+ ++.|.- . +...++--.. +... +
T Consensus 198 ~~~~~pd~~~~~---~i-~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~-----------~- 261 (381)
T 3q6k_A 198 HPTFKAERPTKF---DY-GGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKG-----------G- 261 (381)
T ss_dssp CGGGSCCSCEEE---EE-TTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTT-----------C-
T ss_pred cCCCccccCcce---EE-CCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcc-----------h-
Confidence 1 01110111 00 111 347889999997 564443 3 3334443332 1110 0
Q ss_pred cCCCcceeeCCcCC-ceeeeEEEec-CCCcEEEEeccCCeEEEEeccC
Q 021160 138 KREEPQVYSGHRNS-QTVKGVNFFG-PNDEYVMSGSDCGHLFIWKKKG 183 (316)
Q Consensus 138 ~~~~~~~~~~~~~~-~~i~~~~~~~-~~~~~l~~~~~dg~v~~wd~~~ 183 (316)
...++.+- .... ..-..+++ . .+|.++++--+...|..|+..+
T Consensus 262 -~~~v~~~G-~kg~~s~~~~~~~-D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 262 -KLNPELLG-NRGKYNDAIALAY-DPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp -CCCCEEEE-ECCTTCCEEEEEE-CTTTCEEEEEESSSSEEEEEETTS
T ss_pred -hhceEEee-ecCCCCCcceEEE-eCCCCeEEEEeccCCeEEEEeCCC
Confidence 01222222 1110 01233444 4 5677777777888999999875
No 359
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=61.27 E-value=62 Score=28.57 Aligned_cols=58 Identities=16% Similarity=0.226 Sum_probs=41.4
Q ss_pred eeeEEEecCCCcEEEEecc------------CCeEEEEeccCCeeEEEeecC-ccceEEEEEcCCCCeEEEE
Q 021160 154 VKGVNFFGPNDEYVMSGSD------------CGHLFIWKKKGGKLVRLMVGD-RHVVNQLEPHPHIPMFATC 212 (316)
Q Consensus 154 i~~~~~~~~~~~~l~~~~~------------dg~v~~wd~~~~~~~~~~~~~-~~~v~~~~~~p~~~~l~s~ 212 (316)
...|.| .++|.+.++-.. ...|..++..++++...+.+. ...++.++|+||++.|..+
T Consensus 478 PDnL~f-d~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 478 PDGLGF-DKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEE-CTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCceEE-CCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 567888 888887763221 226777888888876666543 3578999999999986655
No 360
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=59.12 E-value=76 Score=26.27 Aligned_cols=178 Identities=15% Similarity=0.161 Sum_probs=89.8
Q ss_pred CccceEEEEECCCCCcEEEE-Eec--------------CCcEEEEeCcCC--cccCCCCCCCCceecccccccCCCcccE
Q 021160 33 NSIRLNAIVIDPRNPNYFAV-GGS--------------DEYARVYDIRKC--HWYSPISSDTPVDTFCPRHLIGKNNIHI 95 (316)
Q Consensus 33 h~~~v~~~~~~~~~~~~l~~-g~~--------------dg~v~~wd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i 95 (316)
+--.|..+...+.+ ++-+. .+. --+|.+||+.+. +++..+..+. .... ....+
T Consensus 85 ~lvsV~~v~iD~~~-rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~--------~~~~-~~S~l 154 (381)
T 3q6k_A 85 ELTSIYQPVIDDCR-RLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPT--------RLVE-KPTYF 154 (381)
T ss_dssp SSSCEEEEEECTTC-EEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCG--------GGCC-CGGGE
T ss_pred ceEEeeEEEEcCCC-cEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCH--------Hhcc-cCCcc
Confidence 34568888888877 44333 221 124778999888 6544332221 1111 23567
Q ss_pred EEEEEc---cC----CC-eEEE-ecCCcEEEEEcCCCCCC--CCccCCccccccCCCcceeeCCcC--CceeeeEEEecC
Q 021160 96 TGLAYS---NT----SE-LLIS-YNDELVYLFEKNMGLGP--SPLSLSPEDLQKREEPQVYSGHRN--SQTVKGVNFFGP 162 (316)
Q Consensus 96 ~~~~~~---~~----~~-~l~s-~~d~~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~ 162 (316)
..+++. |. +. ..++ .....|.++|+.++..= .+..+..+ ......+.+..- ...+..++. +|
T Consensus 155 ~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd----~~~~~~i~G~~~~~~~Gi~gIaL-sp 229 (381)
T 3q6k_A 155 GGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAE----RPTKFDYGGKEYEFKAGIFGITL-GD 229 (381)
T ss_dssp EEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCC----SCEEEEETTEEEEECCCEEEEEE-CC
T ss_pred ceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccc----cCcceEECCEEeEeccCceEEEe-cC
Confidence 778777 22 22 3334 35778999999887310 00011000 000001111110 012778887 77
Q ss_pred C----CcEEEEeccCC-eEEEEe---ccCC---eeEEEeecC--ccceEEEEEc-CCCCeEEEEeCCCcEEEecCCC
Q 021160 163 N----DEYVMSGSDCG-HLFIWK---KKGG---KLVRLMVGD--RHVVNQLEPH-PHIPMFATCGIEKTVKLWAPMP 225 (316)
Q Consensus 163 ~----~~~l~~~~~dg-~v~~wd---~~~~---~~~~~~~~~--~~~v~~~~~~-p~~~~l~s~~~d~~i~iwd~~~ 225 (316)
+ ++.|.-....+ .++-.. ++.. ..+..+-.. ...-..++.. .+|.++++--....|..|+..+
T Consensus 230 ~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 230 RDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp CCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTS
T ss_pred CcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCC
Confidence 6 66666555443 333332 1111 112222111 1233346675 5777777777888999999875
No 361
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=53.36 E-value=51 Score=29.23 Aligned_cols=59 Identities=22% Similarity=0.414 Sum_probs=36.9
Q ss_pred cEEEEEEccCCCeEEEec-C------------CcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEe
Q 021160 94 HITGLAYSNTSELLISYN-D------------ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFF 160 (316)
Q Consensus 94 ~i~~~~~~~~~~~l~s~~-d------------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 160 (316)
..--|+|+|.|.++++.. + ..+.+.+..++ +..+.+.++. ...++.++|
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g----------------~~~rf~~~P~-gaE~TG~~f- 538 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATG----------------EIRRFMVGPI-GCEVTGISF- 538 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTC----------------CEEEEEECCT-TCEEEEEEE-
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCC----------------eEEEEEeCCC-CccCcCeeE-
Confidence 345689999999776632 1 12344444444 3444444443 356999999
Q ss_pred cCCCcEEEEe
Q 021160 161 GPNDEYVMSG 170 (316)
Q Consensus 161 ~~~~~~l~~~ 170 (316)
+|+++.|++.
T Consensus 539 spDg~tlfvn 548 (592)
T 3zwu_A 539 SPDQKTLFVG 548 (592)
T ss_dssp CTTSSEEEEE
T ss_pred CCCCCEEEEE
Confidence 8998877665
No 362
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=52.49 E-value=78 Score=27.94 Aligned_cols=61 Identities=20% Similarity=0.362 Sum_probs=38.2
Q ss_pred ccEEEEEEccCCCeEEEec-------------CCcEEEEEcCCCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEE
Q 021160 93 IHITGLAYSNTSELLISYN-------------DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNF 159 (316)
Q Consensus 93 ~~i~~~~~~~~~~~l~s~~-------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 159 (316)
.....|.|.++|.+.++.. ...+..++..++ +....+.+.. ...++.++|
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tG----------------el~~fl~~P~-~aEpnGiaf 538 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATG----------------EIRRFMVGPI-GCEVTGISF 538 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTC----------------CEEEEEECCT-TCEEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCC----------------eEEEEEeCCC-CccccCCEE
Confidence 4567899999999777421 114555555554 3333333322 234899999
Q ss_pred ecCCCcEEEEec
Q 021160 160 FGPNDEYVMSGS 171 (316)
Q Consensus 160 ~~~~~~~l~~~~ 171 (316)
+||++.|++.-
T Consensus 539 -SPD~ktLfV~v 549 (592)
T 4a9v_A 539 -SPDQKTLFVGI 549 (592)
T ss_dssp -CTTSSEEEEEE
T ss_pred -CCCCCEEEEEE
Confidence 99998887763
No 363
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=49.66 E-value=47 Score=32.15 Aligned_cols=32 Identities=3% Similarity=0.028 Sum_probs=26.5
Q ss_pred ceEEEEEcCCCCeEEEEeCCCcEEEecCCCCC
Q 021160 196 VVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD 227 (316)
Q Consensus 196 ~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~~ 227 (316)
.+.+++..++..++++-+.|+++|||++.++.
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~ 270 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQ 270 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCC
Confidence 44556677888899999999999999998764
No 364
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=35.88 E-value=46 Score=30.26 Aligned_cols=35 Identities=9% Similarity=0.191 Sum_probs=27.6
Q ss_pred cceEEEEECCCCCcEEEEEecCCcEEEEeCcCCcccCC
Q 021160 35 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSP 72 (316)
Q Consensus 35 ~~v~~~~~~~~~~~~l~~g~~dg~v~~wd~~~~~~~~~ 72 (316)
..|.++.+. . .++++-+.|+.+|+|++.++++...
T Consensus 222 ~~Is~~~~~--~-~fLftL~~Dh~LRiWsL~t~~lv~t 256 (729)
T 3f7f_A 222 SVISCKLFH--E-RYLIVLTQNCHLKIWDLTSFTLIQD 256 (729)
T ss_dssp CEEEEEEET--T-TEEEEEETTCEEEEEETTTTEEEEE
T ss_pred ceEEEeccC--C-cEEEEEEcCCeEEEEEcCCCceEEe
Confidence 346666664 4 6999999999999999999986544
No 365
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=31.45 E-value=1.5e+02 Score=25.60 Aligned_cols=55 Identities=13% Similarity=0.149 Sum_probs=37.0
Q ss_pred EEEEeccCCeEEEEecc-CC-------eeEEEeec--CccceEEEEEcCCCCeEEEEeCCCcEEE
Q 021160 166 YVMSGSDCGHLFIWKKK-GG-------KLVRLMVG--DRHVVNQLEPHPHIPMFATCGIEKTVKL 220 (316)
Q Consensus 166 ~l~~~~~dg~v~~wd~~-~~-------~~~~~~~~--~~~~v~~~~~~p~~~~l~s~~~d~~i~i 220 (316)
.+..|+.+|.|+-.-+. .+ ..+..+.. ...+|..|.++++..+|..++.++.++|
T Consensus 423 V~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 423 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 56778999987644432 21 12333432 3468999999999999999988877665
No 366
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=28.55 E-value=2.4e+02 Score=22.94 Aligned_cols=21 Identities=10% Similarity=0.145 Sum_probs=14.7
Q ss_pred ccEEEEEEcc--CCCeEEEecCC
Q 021160 93 IHITGLAYSN--TSELLISYNDE 113 (316)
Q Consensus 93 ~~i~~~~~~~--~~~~l~s~~d~ 113 (316)
..|.+|++.| .+.+++++..+
T Consensus 55 ~~v~~i~~dp~~~~~l~~g~~~g 77 (394)
T 3b7f_A 55 HTIHHIVQDPREPERMLMAARTG 77 (394)
T ss_dssp SEEEEEEECSSSTTCEEEEEEC-
T ss_pred CceEEEEECCCCCCeEEEEecCC
Confidence 4689999998 56666665544
No 367
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=27.45 E-value=2.5e+02 Score=22.82 Aligned_cols=67 Identities=12% Similarity=0.117 Sum_probs=34.1
Q ss_pred eeeeEEEecC-CCcEEEEeccCCeEEEEeccCCeeEEEeec-----C--------ccceEEEEEcCCC-CeEEEEeCCCc
Q 021160 153 TVKGVNFFGP-NDEYVMSGSDCGHLFIWKKKGGKLVRLMVG-----D--------RHVVNQLEPHPHI-PMFATCGIEKT 217 (316)
Q Consensus 153 ~i~~~~~~~~-~~~~l~~~~~dg~v~~wd~~~~~~~~~~~~-----~--------~~~v~~~~~~p~~-~~l~s~~~d~~ 217 (316)
.+.++.+ .| +...+..+..++.|...+ ..|+.-..+.. + ...+.+++++|.. ..|..+... .
T Consensus 178 ~i~~i~~-d~~~~~~l~vg~~~ggl~~s~-DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~-g 254 (394)
T 3b7f_A 178 KMHSILV-DPRDPKHLYIGMSSGGVFEST-DAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHC-G 254 (394)
T ss_dssp EEEEEEE-CTTCTTCEEEEEETBEEEEES-STTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETT-E
T ss_pred ceeEEEE-CCCCCCEEEEEECCCCEEEEC-CCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCC-e
Confidence 3778887 65 344555555455444332 22332222211 0 1247889999863 445555543 3
Q ss_pred EEEec
Q 021160 218 VKLWA 222 (316)
Q Consensus 218 i~iwd 222 (316)
|...+
T Consensus 255 l~~s~ 259 (394)
T 3b7f_A 255 IYRMD 259 (394)
T ss_dssp EEEEE
T ss_pred EEEeC
Confidence 44444
No 368
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=26.17 E-value=2.5e+02 Score=22.47 Aligned_cols=169 Identities=11% Similarity=0.015 Sum_probs=86.3
Q ss_pred cceEEEE-ECC--CCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEEEE-ccCCCeEEEe
Q 021160 35 IRLNAIV-IDP--RNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAY-SNTSELLISY 110 (316)
Q Consensus 35 ~~v~~~~-~~~--~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~l~s~ 110 (316)
..|.++. +.. ++ .+++..+.+|.++--.+....... ...+. ...+ .. .+.+..+.. +....+++.+
T Consensus 95 e~i~~~~~~~~~~~e-~~~v~~T~~G~iKr~~l~~~~~~~----r~G~~---~i~l-ke-~D~lv~~~~~~~~d~ill~T 164 (327)
T 3uc1_A 95 ERIAQVIQIRGYTDA-PYLVLATRNGLVKKSKLTDFDSNR----SGGIV---AVNL-RD-NDELVGAVLCSAGDDLLLVS 164 (327)
T ss_dssp CCEEEEEEESSTTSS-SEEEEEETTSEEEEEEGGGGCCCC----SSCEE---SCBC-CT-TCCEEEEEEECTTCEEEEEE
T ss_pred CEEEEEEEeccCCCC-CEEEEEcCCCEEEEeEHHHhhccc----cCceE---EEEE-CC-CCEEEEEEEecCCCEEEEEE
Confidence 3455543 332 34 689999999999998876533110 00111 1111 12 334444433 3333466668
Q ss_pred cCCcEEEEEcC--CCCCCCCccCCccccccCCCcceeeCCcCCceeeeEEEecCCCcEEEEeccCCeEEEEeccCC----
Q 021160 111 NDELVYLFEKN--MGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGG---- 184 (316)
Q Consensus 111 ~d~~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~~wd~~~~---- 184 (316)
..|.+..+... .-. ..... ..+...-.+.. . ..|.++.. -+.+.+++..+..|.++.-.+..-
T Consensus 165 ~~G~~~rf~~~~~eip--~~gr~-----a~Gv~~i~L~~-~--d~Vv~~~~-~~~~~~ll~~T~~G~~Krt~l~e~~~~~ 233 (327)
T 3uc1_A 165 ANGQSIRFSATDEALR--PMGRA-----TSGVQGMRFNI-D--DRLLSLNV-VREGTYLLVATSGGYAKRTAIEEYPVQG 233 (327)
T ss_dssp TTSEEEEEECCTTTSC--CCCTT-----SBCEESSCCCT-T--CCEEEEEE-CCTTCEEEEEETTSEEEEEEGGGSCBCC
T ss_pred CCCeEEEEECcccccC--cCCcC-----CCCeeeecCCC-C--CEEEEEEE-ECCCCEEEEEeCCCcEEEEEHHHccccC
Confidence 89999988876 220 00000 00001111211 1 23666665 345668889999999998875421
Q ss_pred ---eeEEEee--cCccceEEEEEcCCCCeEEEEeCCCcEEEecCC
Q 021160 185 ---KLVRLMV--GDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPM 224 (316)
Q Consensus 185 ---~~~~~~~--~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~ 224 (316)
+-+..+. ...+.+..+........++..+.+|.+..++..
T Consensus 234 R~~~G~~~~~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~ 278 (327)
T 3uc1_A 234 RGGKGVLTVMYDRRRGRLVGALIVDDDSELYAVTSGGGVIRTAAR 278 (327)
T ss_dssp TTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEEGGGCEEEEEGG
T ss_pred cCCCcEEEEEecCCCCeEEEEEEeCCCccEEEEcCCCeEEEEehh
Confidence 2122222 212344444443344456666667777666543
No 369
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=25.19 E-value=1.5e+02 Score=25.85 Aligned_cols=67 Identities=10% Similarity=0.096 Sum_probs=41.6
Q ss_pred eeeEEEe-cCCCcEEEEeccCCeEEEEeccCC----eeEEEeec--CccceE-EEEEcCCCCeEEEEeCCCcEEE
Q 021160 154 VKGVNFF-GPNDEYVMSGSDCGHLFIWKKKGG----KLVRLMVG--DRHVVN-QLEPHPHIPMFATCGIEKTVKL 220 (316)
Q Consensus 154 i~~~~~~-~~~~~~l~~~~~dg~v~~wd~~~~----~~~~~~~~--~~~~v~-~~~~~p~~~~l~s~~~d~~i~i 220 (316)
+++++.. ..+...+..|+.+|.|.-..+... ..+..+.. ...+|. .|.++++..+|..++.++.++|
T Consensus 402 lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 402 LTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp EEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred eEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 4455441 123345778899998876555422 23333332 235775 8999999889888887766655
No 370
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=23.77 E-value=2.8e+02 Score=22.15 Aligned_cols=201 Identities=9% Similarity=-0.018 Sum_probs=102.1
Q ss_pred CCCCcEEEEEecCCcEEEEeCcCCcccCCCCCCCCceecccccccCCCcccEEEE-EEccCCCeEEEecCCcEEEEEcCC
Q 021160 44 PRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGL-AYSNTSELLISYNDELVYLFEKNM 122 (316)
Q Consensus 44 ~~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~l~s~~d~~i~iwd~~~ 122 (316)
|+. .++++.+.+|.|+--.+...+... . ....+ .. .+.+..+ ..+....+++.++.|.++-+....
T Consensus 3 ~~e-~~~v~lT~~G~IKr~~~~~~~~~~-------~---~~~~l-ke-~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~e 69 (323)
T 1wp5_A 3 ASE-DVIVTVTKDGYVKRTSLRSYAASN-------G---QDFAM-KD-TDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHE 69 (323)
T ss_dssp SCC-EEEEEEETTCEEEEEEHHHHHHTT-------T---CCCCC-CT-TCCEEEEEEEETTSEEEEEETTSEEEEEEGGG
T ss_pred cCC-cEEEEEeCCCEEEEeEHHHhhhcC-------c---ccccc-CC-CCEEEEEEEECCCCEEEEEECCCEEEEEEHHH
Confidence 445 678888999999877655322100 0 00011 12 2333333 334444567778889888777643
Q ss_pred CCCCCCccCCccccccCCCc-ceeeCCcCCceeeeEEEecC--CCcEEEEeccCCeEEEEeccC--------CeeEEEee
Q 021160 123 GLGPSPLSLSPEDLQKREEP-QVYSGHRNSQTVKGVNFFGP--NDEYVMSGSDCGHLFIWKKKG--------GKLVRLMV 191 (316)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~--~~~~l~~~~~dg~v~~wd~~~--------~~~~~~~~ 191 (316)
-... ... ..+.++ ..+.-..+ ..|..+..... ++.+++..+..|.++...+.. |...-.+.
T Consensus 70 lp~~--~r~-----a~G~~i~~~i~L~~~-e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~ 141 (323)
T 1wp5_A 70 LPDI--RWK-----DLGQHIANIIPIDRD-EEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLK 141 (323)
T ss_dssp SCBC--CTT-----SCCEEGGGTSCCCTT-CCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCC
T ss_pred CcCC--CCC-----CCCcChhhccCCCCC-CEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeC
Confidence 2100 000 000111 11111111 22554432132 256788999999999988642 22111222
Q ss_pred cCccceEEEEEcCCCCeEEEEeCCCcEEEecCCCC-------C---CCCCCCCcccceeeeecCCCCceeEEecCCCeEE
Q 021160 192 GDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPT-------D---FPPLPDNAEKIMKANKQGREDHSRITLTPDVIMH 261 (316)
Q Consensus 192 ~~~~~v~~~~~~p~~~~l~s~~~d~~i~iwd~~~~-------~---~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~ 261 (316)
.. +.+..+........++..+.+|.+..+....- . ...+. ..+.+........+...++..+..|..+
T Consensus 142 e~-d~lv~~~~~~~~~~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~-~~d~Vv~~~~~~~~~~~ll~vt~~G~gK 219 (323)
T 1wp5_A 142 ND-DQVVDVHLTDGMNELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLK-EGDYIVSGQLITSKDESIVVATQRGAVK 219 (323)
T ss_dssp TT-CCEEEEEEECSCSEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCC-TTCCEEEEEEECCTTCEEEEEETTSEEE
T ss_pred CC-CEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeC-CCCEEEEEEEEcCCCcEEEEEECCCceE
Confidence 22 45555555444556777788888777764321 1 22333 2344544443333322677888888888
Q ss_pred EEEecc
Q 021160 262 VLRLQR 267 (316)
Q Consensus 262 ~w~~~~ 267 (316)
..++..
T Consensus 220 r~~~~e 225 (323)
T 1wp5_A 220 KMKLTE 225 (323)
T ss_dssp EEEGGG
T ss_pred EEEHHH
Confidence 777654
No 371
>1xks_A Nuclear pore complex protein NUP133; beta-propeller, helical insertions, protein transport; 2.35A {Homo sapiens} SCOP: b.69.14.1
Probab=22.29 E-value=3.6e+02 Score=22.87 Aligned_cols=106 Identities=10% Similarity=0.069 Sum_probs=50.1
Q ss_pred eeEEEEeeCCCcceEEEeccccccccCCCCccceEEEEECCC--------CCcEEEEEecCCcEEEEeCcCCcccCCCCC
Q 021160 4 FNMLFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPR--------NPNYFAVGGSDEYARVYDIRKCHWYSPISS 75 (316)
Q Consensus 4 ~v~vwd~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~--------~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~ 75 (316)
.+.||..+.........+....-...+..|.....++.+.+. .+-++++.. +|.|+.|.--...
T Consensus 58 ~l~VW~y~~~~~~~~~~c~~lpLp~sd~~~~~~lvsi~~~~~~~~~~s~~~pGlliVsp-tG~VryWesIs~~------- 129 (450)
T 1xks_A 58 KLIIWKIALSPITKLSVCKELQLPPSDFHWSADLVALSYSSPSGEAHSTQAVAVMVATR-EGSIRYWPSLAGE------- 129 (450)
T ss_dssp EEEEEECCSSCCGGGCCEEEEECCCCSSCCCGGGEEEEECC-------CTTEEEEEECT-TCEEEEESCTTCT-------
T ss_pred eEEEEeecCCCCCCcccceeccCCccccccCCcEEEEEcCCCccccccCCCceEEEEcC-CccEEEccccCCC-------
Confidence 578999876521111111100000111235554555554332 323555555 9999999854332
Q ss_pred CCCceecccccccCCCcccEEEEEEccCCCeEEEecCCcEEEEEcC
Q 021160 76 DTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDELVYLFEKN 121 (316)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d~~i~iwd~~ 121 (316)
...++ ..+.......++.+.-.....++++.+-|.+....++
T Consensus 130 ~~~~e----i~~~L~~~E~vt~l~n~epaGfIlaTStgrl~~lsir 171 (450)
T 1xks_A 130 DTYTE----AFVDSGGDKTYSFLTAVQGGSFILSSSGSQLIRLIPE 171 (450)
T ss_dssp TCCEE----EECC----CCEEEEEEETTTEEEEEETTCCEEEEEEC
T ss_pred CceEE----EEecCCCCceEEEEeecCCceEEEEeccceEEEEEec
Confidence 11111 1110111245666543333347777778888888876
No 372
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=21.86 E-value=2.9e+02 Score=24.43 Aligned_cols=57 Identities=5% Similarity=-0.011 Sum_probs=36.9
Q ss_pred cEEEEeccCCeEEEEeccC-C----e-eEEEee--cCccceEEEEEcCCCCeEEEEeCCCcEEEe
Q 021160 165 EYVMSGSDCGHLFIWKKKG-G----K-LVRLMV--GDRHVVNQLEPHPHIPMFATCGIEKTVKLW 221 (316)
Q Consensus 165 ~~l~~~~~dg~v~~wd~~~-~----~-~~~~~~--~~~~~v~~~~~~p~~~~l~s~~~d~~i~iw 221 (316)
..+..|+++|.|+-.-... + . .+..+. ....+|..|.++++...|..++.++.++|-
T Consensus 381 tVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qVP 445 (590)
T 3nvq_A 381 HVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQVP 445 (590)
T ss_dssp EEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEcc
Confidence 3567888999876443322 2 1 122332 234678999999988888888777666653
No 373
>3aq2_A 6B protein; miRNA machineries, toxin, ADP-ribosylation fold; 1.65A {Agrobacterium vitis} PDB: 3aq3_A
Probab=20.60 E-value=1.5e+02 Score=21.30 Aligned_cols=27 Identities=19% Similarity=0.243 Sum_probs=9.2
Q ss_pred cccccccCCCCeEEEEeccCCCCCCCCCCcceeeec
Q 021160 280 AADFESDEEEGETYLLGFSDSDASSEGGGNQRECII 315 (316)
Q Consensus 280 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 315 (316)
+.+.+-++++ ++++.++++-+.|+|||
T Consensus 163 gny~ee~e~~---------~~~e~e~~~~~~~e~q~ 189 (207)
T 3aq2_A 163 GNYVEEGEDN---------EGIENEEEEEETREFQL 189 (207)
T ss_dssp TTCCCCCC----------------------CCCCCC
T ss_pred CccccccccC---------cccccccccccchhhhh
Confidence 4555555555 34455555567788886
No 374
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=20.27 E-value=4.1e+02 Score=23.94 Aligned_cols=56 Identities=13% Similarity=0.194 Sum_probs=36.2
Q ss_pred cEEEEeccCCeEEE-EeccCCe-------eEEEee--cCccceEEEEEcCCCCeEEEEeCCCcEEE
Q 021160 165 EYVMSGSDCGHLFI-WKKKGGK-------LVRLMV--GDRHVVNQLEPHPHIPMFATCGIEKTVKL 220 (316)
Q Consensus 165 ~~l~~~~~dg~v~~-wd~~~~~-------~~~~~~--~~~~~v~~~~~~p~~~~l~s~~~d~~i~i 220 (316)
..+..|+.+|.|+- .....+. .+..+. ....+|..|.++++...|..++.++.++|
T Consensus 430 tVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 430 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 35678889998753 3222111 222332 24567899999999999988888776665
Done!