Query 021161
Match_columns 316
No_of_seqs 295 out of 1899
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 13:38:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021161.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021161hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dou_A Ribosomal RNA large sub 100.0 1.5E-43 5.2E-48 312.7 16.3 181 17-212 1-184 (191)
2 3gcz_A Polyprotein; flavivirus 100.0 8.6E-39 3E-43 296.9 9.7 182 19-228 69-263 (282)
3 3eld_A Methyltransferase; flav 100.0 4.1E-38 1.4E-42 294.0 12.0 179 19-227 60-252 (300)
4 3evf_A RNA-directed RNA polyme 100.0 6.5E-38 2.2E-42 290.6 11.3 184 20-228 54-246 (277)
5 2px2_A Genome polyprotein [con 100.0 5.4E-38 1.8E-42 287.7 9.7 168 20-213 53-230 (269)
6 2plw_A Ribosomal RNA methyltra 100.0 2.6E-34 9E-39 251.0 18.6 183 20-213 1-200 (201)
7 2nyu_A Putative ribosomal RNA 100.0 1.2E-33 4.1E-38 245.5 18.1 194 20-217 1-195 (196)
8 3p8z_A Mtase, non-structural p 100.0 1.1E-28 3.8E-33 223.2 15.8 156 19-205 57-225 (267)
9 2oxt_A Nucleoside-2'-O-methylt 100.0 4.7E-29 1.6E-33 231.2 10.1 173 20-226 54-245 (265)
10 2p41_A Type II methyltransfera 100.0 1E-28 3.6E-33 233.2 9.8 173 19-224 61-249 (305)
11 1ej0_A FTSJ; methyltransferase 99.9 1.7E-26 5.7E-31 194.3 20.3 180 20-211 1-180 (180)
12 2wa2_A Non-structural protein 99.9 1.8E-27 6.2E-32 221.8 9.3 176 19-227 61-254 (276)
13 3r24_A NSP16, 2'-O-methyl tran 99.9 4.4E-27 1.5E-31 218.5 10.1 147 41-213 109-261 (344)
14 3lkz_A Non-structural protein 99.9 4.6E-26 1.6E-30 212.0 13.3 157 20-206 74-244 (321)
15 2xyq_A Putative 2'-O-methyl tr 99.8 3.2E-21 1.1E-25 181.1 10.8 148 38-213 60-215 (290)
16 2hwk_A Helicase NSP2; rossman 99.7 9.4E-18 3.2E-22 154.8 9.2 111 90-213 185-301 (320)
17 4auk_A Ribosomal RNA large sub 99.7 3.8E-17 1.3E-21 157.5 11.0 95 14-131 177-282 (375)
18 3id6_C Fibrillarin-like rRNA/T 99.5 8.7E-14 3E-18 126.4 10.7 117 20-167 56-181 (232)
19 3lpm_A Putative methyltransfer 99.5 2.1E-13 7.2E-18 124.0 12.0 152 39-211 46-219 (259)
20 2ozv_A Hypothetical protein AT 99.5 5.1E-13 1.7E-17 122.2 13.3 156 39-209 34-211 (260)
21 3hp7_A Hemolysin, putative; st 99.4 6.8E-13 2.3E-17 124.4 12.4 159 17-208 61-249 (291)
22 1ixk_A Methyltransferase; open 99.4 3.7E-12 1.3E-16 120.0 11.8 123 40-182 117-264 (315)
23 3m4x_A NOL1/NOP2/SUN family pr 99.3 2.2E-12 7.5E-17 127.9 10.2 125 40-183 104-253 (456)
24 2frx_A Hypothetical protein YE 99.3 3.7E-12 1.3E-16 126.9 11.7 124 41-183 117-265 (479)
25 3m6w_A RRNA methylase; rRNA me 99.3 1.9E-12 6.4E-17 128.6 8.8 124 40-183 100-248 (464)
26 3mti_A RRNA methylase; SAM-dep 99.3 6.2E-12 2.1E-16 107.6 9.9 109 39-171 20-139 (185)
27 3ajd_A Putative methyltransfer 99.3 7.2E-12 2.5E-16 115.3 9.0 128 40-183 82-230 (274)
28 4dzr_A Protein-(glutamine-N5) 99.3 1E-11 3.5E-16 107.5 9.2 159 31-210 20-206 (215)
29 2yxl_A PH0851 protein, 450AA l 99.3 8.7E-12 3E-16 122.9 9.7 126 40-183 258-408 (450)
30 4df3_A Fibrillarin-like rRNA/T 99.3 3.4E-11 1.2E-15 109.4 12.8 99 39-167 75-182 (233)
31 2b3t_A Protein methyltransfera 99.3 4E-11 1.4E-15 109.9 13.3 143 40-209 108-276 (276)
32 2b9e_A NOL1/NOP2/SUN domain fa 99.3 4.6E-11 1.6E-15 112.6 13.1 125 40-183 101-253 (309)
33 2ipx_A RRNA 2'-O-methyltransfe 99.3 1.8E-11 6.3E-16 109.0 9.8 119 20-169 57-184 (233)
34 3eey_A Putative rRNA methylase 99.3 6.6E-11 2.3E-15 102.1 13.1 111 39-170 20-142 (197)
35 1nt2_A Fibrillarin-like PRE-rR 99.2 1E-10 3.5E-15 103.7 14.4 98 39-167 55-161 (210)
36 3a27_A TYW2, uncharacterized p 99.2 8.3E-12 2.8E-16 115.0 7.4 137 37-210 115-268 (272)
37 4gek_A TRNA (CMO5U34)-methyltr 99.2 2.3E-11 7.9E-16 111.8 10.1 101 39-169 68-180 (261)
38 3dli_A Methyltransferase; PSI- 99.2 1.5E-11 5E-16 109.8 8.4 112 33-174 33-147 (240)
39 1sqg_A SUN protein, FMU protei 99.2 7.7E-11 2.6E-15 115.3 14.0 125 40-183 245-393 (429)
40 4hg2_A Methyltransferase type 99.2 4.6E-11 1.6E-15 109.6 11.4 96 40-170 38-138 (257)
41 3opn_A Putative hemolysin; str 99.2 6.2E-11 2.1E-15 107.1 12.0 118 16-166 12-136 (232)
42 1dus_A MJ0882; hypothetical pr 99.2 3.9E-11 1.3E-15 101.9 10.0 118 40-191 51-181 (194)
43 3evz_A Methyltransferase; NYSG 99.2 5.9E-11 2E-15 104.9 11.4 133 38-192 52-205 (230)
44 3e05_A Precorrin-6Y C5,15-meth 99.2 3.3E-11 1.1E-15 104.9 9.5 116 39-190 38-165 (204)
45 3h2b_A SAM-dependent methyltra 99.2 9.9E-11 3.4E-15 101.3 11.7 135 42-212 42-198 (203)
46 4fzv_A Putative methyltransfer 99.2 3.2E-11 1.1E-15 116.1 9.2 124 40-183 147-303 (359)
47 3e8s_A Putative SAM dependent 99.2 1.4E-10 4.8E-15 101.1 11.8 157 19-207 31-225 (227)
48 3ggd_A SAM-dependent methyltra 99.2 3E-10 1E-14 101.2 12.9 108 38-172 53-168 (245)
49 3f4k_A Putative methyltransfer 99.2 3E-10 1E-14 101.7 12.8 96 38-167 43-150 (257)
50 3ujc_A Phosphoethanolamine N-m 99.2 2.6E-10 8.9E-15 102.1 12.3 100 39-169 53-161 (266)
51 3dh0_A SAM dependent methyltra 99.1 2.6E-10 9E-15 99.6 11.9 129 31-191 28-180 (219)
52 2frn_A Hypothetical protein PH 99.1 7.7E-11 2.6E-15 108.8 8.8 113 39-189 123-253 (278)
53 3mb5_A SAM-dependent methyltra 99.1 1.9E-10 6.3E-15 103.4 11.0 115 39-190 91-220 (255)
54 3kkz_A Uncharacterized protein 99.1 1.3E-10 4.4E-15 105.3 9.9 97 38-168 43-151 (267)
55 3p9n_A Possible methyltransfer 99.1 2.5E-10 8.5E-15 98.3 11.1 100 40-169 43-155 (189)
56 3g5l_A Putative S-adenosylmeth 99.1 2.7E-10 9.2E-15 102.1 11.7 95 41-168 44-146 (253)
57 3hem_A Cyclopropane-fatty-acyl 99.1 2.3E-10 7.8E-15 105.8 11.5 113 29-173 61-189 (302)
58 4fsd_A Arsenic methyltransfera 99.1 3E-10 1E-14 109.3 12.7 128 39-191 81-250 (383)
59 3njr_A Precorrin-6Y methylase; 99.1 3.7E-10 1.3E-14 99.3 12.0 105 40-183 54-170 (204)
60 3sso_A Methyltransferase; macr 99.1 2.7E-10 9.2E-15 111.2 11.9 102 40-167 215-324 (419)
61 3cgg_A SAM-dependent methyltra 99.1 9.8E-10 3.4E-14 93.2 14.0 125 39-194 44-177 (195)
62 3u81_A Catechol O-methyltransf 99.1 2.5E-10 8.5E-15 101.0 10.5 114 40-183 57-186 (221)
63 2bm8_A Cephalosporin hydroxyla 99.1 6.4E-10 2.2E-14 100.3 13.4 97 41-167 81-187 (236)
64 3hm2_A Precorrin-6Y C5,15-meth 99.1 2.9E-10 9.8E-15 95.9 10.2 109 40-184 24-144 (178)
65 2gb4_A Thiopurine S-methyltran 99.1 1.9E-10 6.7E-15 105.0 9.8 116 40-186 67-221 (252)
66 3fpf_A Mtnas, putative unchara 99.1 2.9E-10 9.8E-15 106.9 10.8 119 39-194 120-252 (298)
67 3dtn_A Putative methyltransfer 99.1 8.4E-10 2.9E-14 97.5 13.4 103 39-172 42-153 (234)
68 3ou2_A SAM-dependent methyltra 99.1 2.3E-10 7.8E-15 99.5 9.5 109 29-170 34-149 (218)
69 3l8d_A Methyltransferase; stru 99.1 3.8E-10 1.3E-14 99.9 10.7 97 39-169 51-155 (242)
70 3e23_A Uncharacterized protein 99.1 2.1E-10 7.2E-15 100.0 8.8 144 37-213 39-204 (211)
71 1jsx_A Glucose-inhibited divis 99.1 2.5E-10 8.5E-15 99.1 9.2 109 41-188 65-184 (207)
72 1xdz_A Methyltransferase GIDB; 99.1 5E-10 1.7E-14 100.4 11.4 94 40-166 69-173 (240)
73 1nkv_A Hypothetical protein YJ 99.1 1.4E-09 4.8E-14 97.2 14.3 104 29-167 25-140 (256)
74 3grz_A L11 mtase, ribosomal pr 99.1 2E-10 6.7E-15 99.9 8.4 114 39-190 58-183 (205)
75 3mgg_A Methyltransferase; NYSG 99.1 2.6E-10 9E-15 103.4 9.5 109 27-167 23-142 (276)
76 1vl5_A Unknown conserved prote 99.1 3.9E-10 1.3E-14 101.6 10.6 96 40-169 36-142 (260)
77 2p7i_A Hypothetical protein; p 99.1 2.8E-10 9.7E-15 100.4 9.4 100 40-174 41-148 (250)
78 1ri5_A MRNA capping enzyme; me 99.1 4.7E-11 1.6E-15 108.9 4.4 102 39-169 62-176 (298)
79 1yzh_A TRNA (guanine-N(7)-)-me 99.1 3.2E-10 1.1E-14 99.6 9.5 129 40-190 40-180 (214)
80 3ofk_A Nodulation protein S; N 99.1 4.9E-10 1.7E-14 97.9 10.4 120 39-190 49-186 (216)
81 3hnr_A Probable methyltransfer 99.1 3.7E-10 1.2E-14 98.8 9.3 97 40-169 44-147 (220)
82 3g5t_A Trans-aconitate 3-methy 99.1 2.8E-10 9.7E-15 105.0 8.6 113 28-167 24-149 (299)
83 3vc1_A Geranyl diphosphate 2-C 99.1 7.3E-10 2.5E-14 103.1 11.2 101 34-168 110-222 (312)
84 3gu3_A Methyltransferase; alph 99.1 3.8E-10 1.3E-14 103.6 9.2 98 39-168 20-127 (284)
85 3q87_B N6 adenine specific DNA 99.1 2.6E-09 9.1E-14 91.0 13.7 136 40-210 22-163 (170)
86 1g8a_A Fibrillarin-like PRE-rR 99.0 8.6E-10 2.9E-14 97.5 10.7 98 39-166 71-177 (227)
87 1kpg_A CFA synthase;, cyclopro 99.0 7.9E-10 2.7E-14 101.0 10.7 99 39-171 62-172 (287)
88 3adn_A Spermidine synthase; am 99.0 1.8E-09 6E-14 101.0 13.2 141 40-208 82-244 (294)
89 3tfw_A Putative O-methyltransf 99.0 6.5E-10 2.2E-14 100.6 9.7 95 40-166 62-169 (248)
90 1xxl_A YCGJ protein; structura 99.0 6.9E-10 2.4E-14 99.1 9.6 97 40-170 20-127 (239)
91 2fca_A TRNA (guanine-N(7)-)-me 99.0 7.4E-10 2.5E-14 98.0 9.6 105 40-167 37-153 (213)
92 2pxx_A Uncharacterized protein 99.0 9.3E-10 3.2E-14 95.2 9.9 109 39-170 40-162 (215)
93 3dr5_A Putative O-methyltransf 99.0 8.9E-10 3E-14 98.5 10.0 93 42-166 57-162 (221)
94 2ex4_A Adrenal gland protein A 99.0 1.2E-09 4.1E-14 97.4 10.8 121 40-191 78-224 (241)
95 1yb2_A Hypothetical protein TA 99.0 3.6E-10 1.2E-14 103.5 7.5 114 39-189 108-234 (275)
96 3orh_A Guanidinoacetate N-meth 99.0 1.5E-10 5E-15 104.2 4.8 100 40-165 59-168 (236)
97 1pjz_A Thiopurine S-methyltran 99.0 2.3E-10 7.8E-15 100.4 5.9 95 40-165 21-138 (203)
98 2xvm_A Tellurite resistance pr 99.0 1.1E-09 3.9E-14 93.6 10.1 94 41-167 32-136 (199)
99 3sm3_A SAM-dependent methyltra 99.0 1.5E-09 5.1E-14 95.1 10.9 99 39-168 28-142 (235)
100 1l3i_A Precorrin-6Y methyltran 99.0 3E-10 1E-14 96.3 6.1 114 39-191 31-158 (192)
101 4dcm_A Ribosomal RNA large sub 99.0 1.3E-09 4.3E-14 105.3 11.1 119 41-190 222-354 (375)
102 2p35_A Trans-aconitate 2-methy 99.0 7.3E-10 2.5E-14 99.1 8.8 112 22-170 18-135 (259)
103 3dlc_A Putative S-adenosyl-L-m 99.0 1.2E-09 4.3E-14 94.5 10.0 102 31-167 35-148 (219)
104 1fbn_A MJ fibrillarin homologu 99.0 2E-09 6.9E-14 95.8 11.6 98 39-167 72-178 (230)
105 3bus_A REBM, methyltransferase 99.0 1.1E-09 3.7E-14 99.0 9.9 104 32-169 53-168 (273)
106 3gjy_A Spermidine synthase; AP 99.0 2.5E-09 8.6E-14 101.3 12.8 123 43-191 91-227 (317)
107 3r3h_A O-methyltransferase, SA 99.0 9.5E-10 3.2E-14 99.5 9.4 99 40-166 59-169 (242)
108 4dmg_A Putative uncharacterize 99.0 1.8E-09 6.3E-14 104.9 11.8 121 39-183 212-343 (393)
109 2pwy_A TRNA (adenine-N(1)-)-me 99.0 6.3E-10 2.1E-14 99.6 7.8 114 39-188 94-220 (258)
110 3pfg_A N-methyltransferase; N, 99.0 8.7E-10 3E-14 99.4 8.7 97 40-168 49-152 (263)
111 3tr6_A O-methyltransferase; ce 99.0 1.1E-09 3.6E-14 96.5 9.0 99 40-166 63-173 (225)
112 2o57_A Putative sarcosine dime 99.0 1.6E-09 5.6E-14 99.3 10.5 97 39-168 80-188 (297)
113 1zx0_A Guanidinoacetate N-meth 99.0 3E-10 1E-14 101.3 5.3 103 39-167 58-170 (236)
114 3ccf_A Cyclopropane-fatty-acyl 99.0 1.2E-09 4E-14 99.7 9.3 105 40-179 56-166 (279)
115 3lcc_A Putative methyl chlorid 99.0 1.6E-09 5.4E-14 96.1 9.7 136 42-210 67-227 (235)
116 1i9g_A Hypothetical protein RV 99.0 1.2E-09 4E-14 99.5 9.0 116 39-190 97-228 (280)
117 3duw_A OMT, O-methyltransferas 99.0 7.7E-10 2.6E-14 97.4 7.6 98 40-166 57-166 (223)
118 3g07_A 7SK snRNA methylphospha 99.0 2.8E-09 9.5E-14 98.7 11.5 101 41-166 46-219 (292)
119 2nxc_A L11 mtase, ribosomal pr 99.0 2.8E-09 9.6E-14 96.9 11.3 113 39-190 118-242 (254)
120 3bkw_A MLL3908 protein, S-aden 99.0 3.5E-09 1.2E-13 93.5 11.5 96 40-168 42-145 (243)
121 3ege_A Putative methyltransfer 99.0 2.8E-09 9.4E-14 96.5 10.9 95 40-169 33-132 (261)
122 1xtp_A LMAJ004091AAA; SGPP, st 99.0 8.1E-09 2.8E-13 92.0 13.7 121 40-191 92-237 (254)
123 2fk8_A Methoxy mycolic acid sy 99.0 2.4E-09 8.2E-14 99.5 10.6 99 40-172 89-199 (318)
124 3jwh_A HEN1; methyltransferase 99.0 2.7E-09 9.4E-14 93.4 10.2 99 40-168 28-142 (217)
125 2b25_A Hypothetical protein; s 99.0 2.3E-09 7.7E-14 101.0 10.4 110 39-182 103-234 (336)
126 4htf_A S-adenosylmethionine-de 99.0 2.2E-09 7.4E-14 98.1 9.9 97 40-169 67-175 (285)
127 1ve3_A Hypothetical protein PH 99.0 1.6E-09 5.5E-14 94.8 8.7 98 39-168 36-143 (227)
128 2yxd_A Probable cobalt-precorr 99.0 1.1E-09 3.9E-14 92.1 7.3 114 40-194 34-158 (183)
129 3i9f_A Putative type 11 methyl 98.9 1.2E-09 4.3E-14 91.7 7.5 114 40-191 16-147 (170)
130 3g89_A Ribosomal RNA small sub 98.9 2.4E-09 8.4E-14 97.4 9.9 93 40-165 79-182 (249)
131 3m33_A Uncharacterized protein 98.9 1.1E-09 3.8E-14 97.1 7.5 111 39-189 46-164 (226)
132 3dxy_A TRNA (guanine-N(7)-)-me 98.9 1.9E-09 6.6E-14 96.1 9.0 107 40-167 33-150 (218)
133 3bxo_A N,N-dimethyltransferase 98.9 2.4E-09 8.3E-14 94.4 9.4 98 40-169 39-143 (239)
134 3mq2_A 16S rRNA methyltransfer 98.9 4E-09 1.4E-13 92.4 10.7 97 40-167 26-140 (218)
135 2zfu_A Nucleomethylin, cerebra 98.9 3.4E-09 1.2E-13 92.5 10.2 108 40-189 66-176 (215)
136 3bwc_A Spermidine synthase; SA 98.9 4.5E-09 1.5E-13 98.3 11.6 143 40-209 94-258 (304)
137 1o54_A SAM-dependent O-methylt 98.9 1.4E-09 4.9E-14 99.4 7.7 115 40-191 111-238 (277)
138 3tma_A Methyltransferase; thum 98.9 6.6E-09 2.2E-13 98.7 12.4 106 40-168 202-318 (354)
139 3ntv_A MW1564 protein; rossman 98.9 3.3E-09 1.1E-13 94.7 9.7 94 40-166 70-175 (232)
140 2ift_A Putative methylase HI07 98.9 1.2E-09 4.1E-14 95.6 6.6 97 41-169 53-165 (201)
141 1i1n_A Protein-L-isoaspartate 98.9 1.8E-09 6.3E-14 95.1 7.8 94 39-169 75-184 (226)
142 1p91_A Ribosomal RNA large sub 98.9 2.1E-09 7.3E-14 97.2 8.5 96 40-174 84-185 (269)
143 3jwg_A HEN1, methyltransferase 98.9 1.5E-09 5.3E-14 95.0 7.2 99 40-168 28-142 (219)
144 2yqz_A Hypothetical protein TT 98.9 3.4E-09 1.2E-13 94.7 9.6 97 38-169 36-142 (263)
145 3m70_A Tellurite resistance pr 98.9 3.6E-09 1.2E-13 96.6 9.6 94 41-168 120-224 (286)
146 2b78_A Hypothetical protein SM 98.9 4E-09 1.4E-13 101.9 10.4 125 40-184 211-349 (385)
147 3lbf_A Protein-L-isoaspartate 98.9 3.9E-09 1.3E-13 91.8 9.2 89 40-168 76-175 (210)
148 3dmg_A Probable ribosomal RNA 98.9 5.8E-09 2E-13 100.9 11.2 118 41-190 233-360 (381)
149 3q7e_A Protein arginine N-meth 98.9 4.4E-09 1.5E-13 100.1 10.2 95 40-164 65-170 (349)
150 1sui_A Caffeoyl-COA O-methyltr 98.9 4.4E-09 1.5E-13 95.4 9.8 99 40-166 78-189 (247)
151 2yvl_A TRMI protein, hypotheti 98.9 4.2E-09 1.4E-13 93.6 9.2 110 40-188 90-211 (248)
152 3ocj_A Putative exported prote 98.9 5.6E-09 1.9E-13 96.7 10.3 101 39-168 116-228 (305)
153 1y8c_A S-adenosylmethionine-de 98.9 5.7E-09 1.9E-13 92.0 9.8 95 41-167 37-142 (246)
154 1nv8_A HEMK protein; class I a 98.9 5.4E-09 1.9E-13 96.9 10.1 131 41-208 123-281 (284)
155 3bkx_A SAM-dependent methyltra 98.9 2.3E-08 8E-13 90.3 14.1 111 30-170 33-162 (275)
156 2ih2_A Modification methylase 98.9 4.1E-08 1.4E-12 94.5 16.6 122 40-182 38-183 (421)
157 2igt_A SAM dependent methyltra 98.9 4.4E-09 1.5E-13 99.9 9.6 124 40-184 152-291 (332)
158 1inl_A Spermidine synthase; be 98.9 7E-09 2.4E-13 96.7 10.8 142 40-208 89-251 (296)
159 2gs9_A Hypothetical protein TT 98.9 3.9E-09 1.3E-13 91.8 8.4 97 40-172 35-137 (211)
160 1wxx_A TT1595, hypothetical pr 98.9 5.1E-09 1.7E-13 100.8 10.0 110 41-171 209-329 (382)
161 2esr_A Methyltransferase; stru 98.9 6.1E-09 2.1E-13 88.2 9.3 99 40-171 30-142 (177)
162 3cc8_A Putative methyltransfer 98.9 5.4E-09 1.8E-13 91.1 9.2 107 40-178 31-141 (230)
163 3d2l_A SAM-dependent methyltra 98.9 1.1E-08 3.7E-13 90.4 11.3 96 39-167 31-137 (243)
164 1ws6_A Methyltransferase; stru 98.9 3.3E-09 1.1E-13 88.6 7.5 100 41-171 41-151 (171)
165 2p8j_A S-adenosylmethionine-de 98.9 2.2E-09 7.6E-14 92.9 6.5 100 40-170 22-131 (209)
166 1wzn_A SAM-dependent methyltra 98.9 9.7E-09 3.3E-13 91.7 10.9 96 40-167 40-145 (252)
167 1uir_A Polyamine aminopropyltr 98.9 6.4E-09 2.2E-13 97.8 10.1 150 40-217 76-250 (314)
168 2fyt_A Protein arginine N-meth 98.9 7.2E-09 2.5E-13 98.4 10.2 95 40-164 63-168 (340)
169 3c3y_A Pfomt, O-methyltransfer 98.9 4.6E-09 1.6E-13 94.4 8.3 99 40-166 69-180 (237)
170 1mjf_A Spermidine synthase; sp 98.9 7.2E-09 2.4E-13 95.8 9.7 138 40-208 74-238 (281)
171 1iy9_A Spermidine synthase; ro 98.9 2.3E-08 7.8E-13 92.3 13.1 140 41-208 75-235 (275)
172 3r0q_C Probable protein argini 98.9 1.3E-08 4.4E-13 97.9 11.8 95 40-165 62-167 (376)
173 3ckk_A TRNA (guanine-N(7)-)-me 98.9 2.8E-09 9.5E-14 96.2 6.6 107 40-168 45-169 (235)
174 3thr_A Glycine N-methyltransfe 98.9 5.8E-09 2E-13 95.3 8.9 105 40-168 56-176 (293)
175 2yx1_A Hypothetical protein MJ 98.8 2.7E-09 9.3E-14 101.2 6.7 102 39-183 193-306 (336)
176 2a14_A Indolethylamine N-methy 98.8 1.1E-09 3.7E-14 99.7 3.8 128 40-192 54-238 (263)
177 2fhp_A Methylase, putative; al 98.8 5.1E-09 1.7E-13 88.8 7.7 103 40-170 43-157 (187)
178 3uwp_A Histone-lysine N-methyl 98.8 9.2E-09 3.1E-13 100.7 10.5 104 31-166 164-287 (438)
179 2qe6_A Uncharacterized protein 98.8 2E-08 7E-13 92.5 12.3 108 41-170 77-199 (274)
180 2as0_A Hypothetical protein PH 98.8 7.5E-09 2.6E-13 99.9 9.8 122 40-181 216-350 (396)
181 2vdw_A Vaccinia virus capping 98.8 4.7E-09 1.6E-13 98.2 8.1 107 41-169 48-171 (302)
182 1dl5_A Protein-L-isoaspartate 98.8 6.8E-09 2.3E-13 97.2 8.9 92 39-167 73-175 (317)
183 3k6r_A Putative transferase PH 98.8 6.2E-09 2.1E-13 96.8 8.5 92 39-168 123-226 (278)
184 2kw5_A SLR1183 protein; struct 98.8 7E-09 2.4E-13 89.5 8.2 97 39-170 28-134 (202)
185 2i7c_A Spermidine synthase; tr 98.8 3.8E-09 1.3E-13 97.8 7.0 141 40-208 77-238 (283)
186 1fp1_D Isoliquiritigenin 2'-O- 98.8 2.9E-08 9.8E-13 94.8 13.1 108 27-167 195-306 (372)
187 2vdv_E TRNA (guanine-N(7)-)-me 98.8 6.6E-09 2.2E-13 93.5 8.1 106 40-167 48-173 (246)
188 2aot_A HMT, histamine N-methyl 98.8 6.7E-09 2.3E-13 95.6 8.2 109 40-170 51-175 (292)
189 2pt6_A Spermidine synthase; tr 98.8 1.6E-08 5.4E-13 95.5 10.9 141 40-208 115-276 (321)
190 3v97_A Ribosomal RNA large sub 98.8 5.4E-09 1.9E-13 108.6 8.0 108 41-169 539-659 (703)
191 2gpy_A O-methyltransferase; st 98.8 1.1E-08 3.7E-13 90.8 8.9 95 40-166 53-159 (233)
192 2fpo_A Methylase YHHF; structu 98.8 9.6E-09 3.3E-13 89.9 8.0 96 41-169 54-162 (202)
193 3c3p_A Methyltransferase; NP_9 98.8 4.2E-09 1.4E-13 92.0 5.6 93 40-166 55-159 (210)
194 2avd_A Catechol-O-methyltransf 98.8 8.2E-09 2.8E-13 91.0 7.6 99 40-166 68-178 (229)
195 2yxe_A Protein-L-isoaspartate 98.8 1.4E-08 4.7E-13 88.7 8.8 93 39-168 75-178 (215)
196 3g2m_A PCZA361.24; SAM-depende 98.8 9E-09 3.1E-13 94.8 7.8 98 41-170 82-193 (299)
197 2i62_A Nicotinamide N-methyltr 98.8 8.8E-09 3E-13 92.2 7.3 126 40-190 55-237 (265)
198 1g6q_1 HnRNP arginine N-methyl 98.8 1.4E-08 4.8E-13 95.7 9.0 95 40-164 37-142 (328)
199 1o9g_A RRNA methyltransferase; 98.8 5.2E-09 1.8E-13 94.1 5.6 109 41-165 51-212 (250)
200 2pjd_A Ribosomal RNA small sub 98.8 2.4E-08 8.1E-13 94.6 9.7 118 41-190 196-323 (343)
201 2y1w_A Histone-arginine methyl 98.7 1.2E-08 4.2E-13 96.9 7.7 95 40-166 49-154 (348)
202 3bgv_A MRNA CAP guanine-N7 met 98.7 8.7E-09 3E-13 95.7 6.4 113 40-181 33-166 (313)
203 3c0k_A UPF0064 protein YCCW; P 98.7 9.4E-09 3.2E-13 99.3 6.8 111 40-170 219-342 (396)
204 1xj5_A Spermidine synthase 1; 98.7 1.7E-08 5.8E-13 96.0 8.4 121 40-186 119-258 (334)
205 2h00_A Methyltransferase 10 do 98.7 8.4E-08 2.9E-12 86.1 12.6 133 41-191 65-237 (254)
206 2avn_A Ubiquinone/menaquinone 98.7 7.3E-09 2.5E-13 93.6 5.3 96 40-169 53-154 (260)
207 2o07_A Spermidine synthase; st 98.7 3E-08 1E-12 92.9 9.7 142 40-208 94-255 (304)
208 2pbf_A Protein-L-isoaspartate 98.7 2.5E-08 8.5E-13 87.8 8.7 102 39-169 78-195 (227)
209 3p2e_A 16S rRNA methylase; met 98.7 1.5E-08 5.3E-13 90.6 7.2 98 40-166 23-138 (225)
210 1r18_A Protein-L-isoaspartate( 98.7 1.5E-08 5.1E-13 89.7 6.8 99 39-169 82-196 (227)
211 1vbf_A 231AA long hypothetical 98.7 2.5E-08 8.5E-13 88.0 8.3 89 40-168 69-166 (231)
212 3mcz_A O-methyltransferase; ad 98.7 3.3E-08 1.1E-12 93.1 9.5 111 29-168 167-288 (352)
213 2r3s_A Uncharacterized protein 98.7 2.3E-07 8E-12 86.3 15.0 109 29-168 152-272 (335)
214 4hc4_A Protein arginine N-meth 98.7 3.3E-08 1.1E-12 95.7 9.4 93 41-164 83-186 (376)
215 3reo_A (ISO)eugenol O-methyltr 98.7 1.2E-07 4E-12 90.8 13.0 105 31-168 193-301 (368)
216 3gdh_A Trimethylguanosine synt 98.7 1.7E-09 5.8E-14 96.3 0.0 90 41-165 78-179 (241)
217 2b2c_A Spermidine synthase; be 98.7 3.4E-08 1.2E-12 93.1 8.9 141 40-209 107-269 (314)
218 3cbg_A O-methyltransferase; cy 98.7 1.7E-08 6E-13 90.1 6.5 97 40-166 71-181 (232)
219 2hnk_A SAM-dependent O-methylt 98.7 2.3E-08 7.7E-13 89.3 7.2 100 40-167 59-181 (239)
220 3p9c_A Caffeic acid O-methyltr 98.7 1.4E-07 5E-12 90.0 12.7 106 30-168 190-299 (364)
221 1x19_A CRTF-related protein; m 98.7 2.4E-07 8.2E-12 87.7 13.9 105 30-168 180-296 (359)
222 2ip2_A Probable phenazine-spec 98.7 3.1E-07 1E-11 85.8 14.2 105 30-168 158-273 (334)
223 3iv6_A Putative Zn-dependent a 98.7 8.9E-08 3E-12 88.2 10.3 104 39-171 43-152 (261)
224 3lst_A CALO1 methyltransferase 98.7 9.6E-08 3.3E-12 90.3 10.6 104 31-168 175-287 (348)
225 2cmg_A Spermidine synthase; tr 98.7 2.7E-07 9.2E-12 84.7 13.3 125 40-208 71-215 (262)
226 1wy7_A Hypothetical protein PH 98.6 1.6E-07 5.3E-12 81.4 10.4 107 40-182 48-164 (207)
227 1qzz_A RDMB, aclacinomycin-10- 98.6 2.5E-07 8.4E-12 87.7 12.6 103 32-168 174-288 (374)
228 1jg1_A PIMT;, protein-L-isoasp 98.6 6E-08 2E-12 86.3 7.8 91 40-169 90-191 (235)
229 2qm3_A Predicted methyltransfe 98.6 2.5E-07 8.5E-12 88.7 12.4 96 41-169 172-280 (373)
230 2g72_A Phenylethanolamine N-me 98.6 2.1E-08 7.3E-13 91.9 4.5 114 29-166 58-214 (289)
231 3i53_A O-methyltransferase; CO 98.6 2E-07 6.9E-12 87.2 11.0 104 31-168 160-275 (332)
232 3bzb_A Uncharacterized protein 98.6 7.1E-07 2.4E-11 82.1 14.3 113 25-165 63-203 (281)
233 3dp7_A SAM-dependent methyltra 98.6 1.9E-07 6.3E-12 89.0 10.5 99 40-167 178-287 (363)
234 3kr9_A SAM-dependent methyltra 98.6 1.6E-07 5.4E-12 84.8 9.3 110 37-183 11-133 (225)
235 1af7_A Chemotaxis receptor met 98.6 1.3E-07 4.3E-12 87.7 8.5 99 41-165 105-250 (274)
236 1fp2_A Isoflavone O-methyltran 98.6 3.2E-07 1.1E-11 86.8 11.3 97 39-168 186-289 (352)
237 3gwz_A MMCR; methyltransferase 98.5 4.1E-07 1.4E-11 86.8 11.7 105 30-168 192-308 (369)
238 2f8l_A Hypothetical protein LM 98.5 1.4E-07 4.9E-12 89.1 8.1 122 40-182 129-275 (344)
239 2qfm_A Spermine synthase; sper 98.5 2.2E-07 7.5E-12 89.4 9.3 132 41-191 188-341 (364)
240 3b3j_A Histone-arginine methyl 98.5 1.1E-07 3.7E-12 94.7 7.4 94 40-165 157-261 (480)
241 1tw3_A COMT, carminomycin 4-O- 98.5 8.5E-07 2.9E-11 83.7 13.3 103 33-169 176-290 (360)
242 3lec_A NADB-rossmann superfami 98.5 2.6E-07 9.1E-12 83.6 8.9 111 37-183 17-139 (230)
243 3axs_A Probable N(2),N(2)-dime 98.5 1.2E-07 4.2E-12 92.1 6.7 94 40-167 51-158 (392)
244 1u2z_A Histone-lysine N-methyl 98.5 3.8E-07 1.3E-11 89.8 10.2 98 39-166 240-358 (433)
245 1ne2_A Hypothetical protein TA 98.5 5.7E-07 2E-11 77.6 10.2 105 40-182 50-160 (200)
246 3gnl_A Uncharacterized protein 98.5 1.9E-07 6.4E-12 85.3 7.2 112 37-185 17-142 (244)
247 3giw_A Protein of unknown func 98.5 7E-07 2.4E-11 82.9 11.1 111 41-171 78-204 (277)
248 3htx_A HEN1; HEN1, small RNA m 98.5 2.1E-07 7E-12 97.8 8.0 99 40-168 720-835 (950)
249 1zg3_A Isoflavanone 4'-O-methy 98.5 6.7E-07 2.3E-11 84.7 10.4 105 31-168 182-294 (358)
250 4e2x_A TCAB9; kijanose, tetron 98.4 8.2E-08 2.8E-12 92.6 4.0 107 31-167 98-208 (416)
251 3tm4_A TRNA (guanine N2-)-meth 98.4 3.2E-07 1.1E-11 88.0 8.0 103 39-167 215-329 (373)
252 2dul_A N(2),N(2)-dimethylguano 98.4 3.6E-07 1.2E-11 88.3 8.2 92 41-167 47-164 (378)
253 1vlm_A SAM-dependent methyltra 98.4 1.8E-07 6.1E-12 82.1 4.5 93 41-171 47-143 (219)
254 1yub_A Ermam, rRNA methyltrans 98.4 1.9E-07 6.4E-12 84.1 4.2 96 40-165 28-143 (245)
255 3bt7_A TRNA (uracil-5-)-methyl 98.4 7.7E-07 2.6E-11 85.2 8.1 90 42-169 214-328 (369)
256 4a6d_A Hydroxyindole O-methylt 98.3 2.1E-06 7.3E-11 81.5 10.8 104 31-167 170-283 (353)
257 2jjq_A Uncharacterized RNA met 98.3 1.8E-06 6.2E-11 84.6 10.4 89 39-167 288-387 (425)
258 2h1r_A Dimethyladenosine trans 98.3 8.9E-07 3.1E-11 82.5 6.6 64 40-128 41-115 (299)
259 1zq9_A Probable dimethyladenos 98.3 2.3E-06 8E-11 79.1 9.2 65 40-129 27-103 (285)
260 2okc_A Type I restriction enzy 98.2 2.7E-06 9.1E-11 83.4 8.8 119 40-167 170-307 (445)
261 3fzg_A 16S rRNA methylase; met 98.2 4.7E-07 1.6E-11 80.1 2.9 93 39-166 47-151 (200)
262 1qam_A ERMC' methyltransferase 98.2 4.1E-06 1.4E-10 75.6 9.0 65 40-128 29-103 (244)
263 1uwv_A 23S rRNA (uracil-5-)-me 98.1 5.5E-06 1.9E-10 81.0 8.5 70 40-128 285-365 (433)
264 3gru_A Dimethyladenosine trans 98.1 3.7E-06 1.3E-10 78.7 6.4 67 40-129 49-124 (295)
265 2ar0_A M.ecoki, type I restric 98.1 1.2E-05 4.1E-10 81.0 10.3 121 40-167 168-312 (541)
266 1m6y_A S-adenosyl-methyltransf 98.0 6.7E-06 2.3E-10 77.0 7.2 72 40-127 25-106 (301)
267 4azs_A Methyltransferase WBDD; 98.0 1.3E-05 4.3E-10 81.1 8.9 68 40-128 65-143 (569)
268 2oyr_A UPF0341 protein YHIQ; a 97.9 9.6E-06 3.3E-10 74.4 5.4 68 40-129 85-174 (258)
269 2k4m_A TR8_protein, UPF0146 pr 97.9 0.00013 4.5E-09 61.6 11.4 105 26-172 18-126 (153)
270 3ll7_A Putative methyltransfer 97.9 7.3E-06 2.5E-10 80.0 4.2 115 39-180 91-222 (410)
271 2r6z_A UPF0341 protein in RSP 97.8 4.1E-06 1.4E-10 76.6 1.6 69 40-129 82-171 (258)
272 3s1s_A Restriction endonucleas 97.8 5.9E-05 2E-09 79.1 10.2 110 40-168 320-466 (878)
273 3tqs_A Ribosomal RNA small sub 97.8 1.4E-05 4.8E-10 73.0 4.8 68 40-127 28-104 (255)
274 3trk_A Nonstructural polyprote 97.8 3.7E-05 1.3E-09 70.5 7.3 104 118-226 210-320 (324)
275 3ldu_A Putative methylase; str 97.8 0.00016 5.4E-09 69.8 11.4 80 40-128 194-310 (385)
276 3fut_A Dimethyladenosine trans 97.7 4.4E-05 1.5E-09 70.4 7.1 91 15-129 13-120 (271)
277 4gqb_A Protein arginine N-meth 97.7 1.2E-05 4.1E-10 82.5 3.3 96 42-164 358-464 (637)
278 3lkd_A Type I restriction-modi 97.7 7.9E-05 2.7E-09 75.1 9.1 111 40-167 220-358 (542)
279 3k0b_A Predicted N6-adenine-sp 97.7 0.00022 7.6E-09 69.0 11.4 114 40-167 200-350 (393)
280 3o4f_A Spermidine synthase; am 97.6 0.00028 9.6E-09 65.9 10.8 142 40-209 82-245 (294)
281 3ua3_A Protein arginine N-meth 97.6 2.1E-05 7.1E-10 81.4 3.0 111 42-164 410-531 (745)
282 2ld4_A Anamorsin; methyltransf 97.6 4.6E-05 1.6E-09 64.1 4.6 92 39-167 10-101 (176)
283 3ldg_A Putative uncharacterize 97.6 0.00048 1.6E-08 66.5 11.6 114 40-167 193-343 (384)
284 2qy6_A UPF0209 protein YFCK; s 97.5 0.00023 8E-09 65.0 7.8 119 40-185 59-228 (257)
285 4gua_A Non-structural polyprot 97.4 0.00028 9.4E-09 70.7 7.8 108 118-230 220-335 (670)
286 3cvo_A Methyltransferase-like 97.4 0.0005 1.7E-08 60.8 8.5 106 24-166 18-153 (202)
287 3v97_A Ribosomal RNA large sub 97.4 0.00045 1.6E-08 71.6 9.5 117 40-166 189-346 (703)
288 3khk_A Type I restriction-modi 97.4 0.00021 7.1E-09 72.1 6.7 116 44-167 247-395 (544)
289 3lcv_B Sisomicin-gentamicin re 97.4 0.00017 5.9E-09 66.6 5.5 99 38-168 129-237 (281)
290 3c6k_A Spermine synthase; sper 97.3 0.00071 2.4E-08 65.3 9.5 130 41-191 205-358 (381)
291 1wg8_A Predicted S-adenosylmet 97.3 0.00082 2.8E-08 62.4 9.0 70 40-127 21-97 (285)
292 3ftd_A Dimethyladenosine trans 97.2 0.00026 8.8E-09 64.2 4.9 68 40-128 30-104 (249)
293 3frh_A 16S rRNA methylase; met 97.2 0.00091 3.1E-08 61.0 8.1 92 40-166 104-205 (253)
294 3uzu_A Ribosomal RNA small sub 97.2 0.00028 9.5E-09 65.2 4.6 73 40-127 41-122 (279)
295 1qyr_A KSGA, high level kasuga 97.2 0.00024 8.2E-09 64.6 4.1 72 40-129 20-100 (252)
296 3tka_A Ribosomal RNA small sub 97.0 0.0011 3.6E-08 63.2 7.3 73 40-127 56-136 (347)
297 3ufb_A Type I restriction-modi 96.9 0.0019 6.4E-08 64.9 8.2 86 40-129 216-312 (530)
298 3g7u_A Cytosine-specific methy 96.9 0.0036 1.2E-07 60.1 9.6 105 43-167 3-119 (376)
299 3b5i_A S-adenosyl-L-methionine 96.8 0.0085 2.9E-07 57.6 11.7 123 42-169 53-227 (374)
300 2wk1_A NOVP; transferase, O-me 96.8 0.0034 1.2E-07 58.1 8.6 100 41-167 106-244 (282)
301 2efj_A 3,7-dimethylxanthine me 96.7 0.0086 2.9E-07 57.8 10.8 123 42-169 53-227 (384)
302 3iyl_W VP1; non-enveloped viru 95.7 0.038 1.3E-06 59.4 10.0 175 13-217 471-670 (1299)
303 2dph_A Formaldehyde dismutase; 95.6 0.021 7.2E-07 54.4 7.0 105 39-165 183-297 (398)
304 3ubt_Y Modification methylase 95.5 0.022 7.6E-07 52.7 6.9 96 43-166 1-109 (331)
305 4e4y_A Short chain dehydrogena 95.5 0.31 1.1E-05 42.6 13.9 113 42-165 4-124 (244)
306 1m6e_X S-adenosyl-L-methionnin 95.4 0.024 8.3E-07 54.2 6.7 120 40-169 50-211 (359)
307 1i4w_A Mitochondrial replicati 95.4 0.043 1.5E-06 52.3 8.3 58 41-111 58-123 (353)
308 1g55_A DNA cytosine methyltran 95.2 0.0091 3.1E-07 56.4 3.1 69 43-128 3-77 (343)
309 4h0n_A DNMT2; SAH binding, tra 95.0 0.012 4.2E-07 55.5 3.4 68 43-127 4-77 (333)
310 3m6i_A L-arabinitol 4-dehydrog 95.0 0.11 3.8E-06 48.5 10.0 97 39-166 177-282 (363)
311 2zig_A TTHA0409, putative modi 94.9 0.039 1.3E-06 50.7 6.3 69 93-167 20-97 (297)
312 1f8f_A Benzyl alcohol dehydrog 94.9 0.036 1.2E-06 52.2 6.2 94 39-165 188-287 (371)
313 1boo_A Protein (N-4 cytosine-s 94.8 0.049 1.7E-06 50.8 6.7 70 93-168 13-85 (323)
314 1pl8_A Human sorbitol dehydrog 94.7 0.066 2.2E-06 50.1 7.5 93 39-165 169-271 (356)
315 1pqw_A Polyketide synthase; ro 94.7 0.062 2.1E-06 45.6 6.7 96 39-165 36-135 (198)
316 3tos_A CALS11; methyltransfera 94.6 0.53 1.8E-05 42.8 13.0 78 93-185 158-235 (257)
317 3iht_A S-adenosyl-L-methionine 94.6 0.15 5.3E-06 43.2 8.6 100 43-165 42-145 (174)
318 1e3j_A NADP(H)-dependent ketos 94.5 0.063 2.1E-06 50.1 6.8 94 39-165 166-269 (352)
319 2qrv_A DNA (cytosine-5)-methyl 94.5 0.055 1.9E-06 50.2 6.3 148 40-210 14-182 (295)
320 1dhr_A Dihydropteridine reduct 94.4 0.12 4.3E-06 45.1 8.3 77 41-129 6-86 (241)
321 3jv7_A ADH-A; dehydrogenase, n 94.4 0.063 2.1E-06 49.9 6.5 94 39-165 169-268 (345)
322 3qv2_A 5-cytosine DNA methyltr 94.3 0.02 6.9E-07 53.9 2.8 73 41-134 9-89 (327)
323 3fpc_A NADP-dependent alcohol 94.2 0.054 1.8E-06 50.5 5.7 97 39-166 164-265 (352)
324 1kol_A Formaldehyde dehydrogen 94.1 0.063 2.1E-06 51.0 6.0 105 39-165 183-298 (398)
325 3uko_A Alcohol dehydrogenase c 94.0 0.31 1.1E-05 45.8 10.6 96 39-166 191-294 (378)
326 3me5_A Cytosine-specific methy 93.8 0.042 1.4E-06 54.5 4.2 75 42-134 88-182 (482)
327 3vyw_A MNMC2; tRNA wobble urid 93.8 0.14 4.9E-06 47.8 7.5 123 42-192 97-247 (308)
328 1ej6_A Lambda2; icosahedral, n 93.5 0.11 3.6E-06 55.8 6.8 112 97-219 554-668 (1289)
329 1p0f_A NADP-dependent alcohol 93.4 0.45 1.5E-05 44.6 10.4 95 39-165 189-291 (373)
330 2pzm_A Putative nucleotide sug 93.2 1.1 3.7E-05 40.8 12.5 74 41-129 19-98 (330)
331 4ej6_A Putative zinc-binding d 93.2 0.11 3.8E-06 48.9 5.9 96 39-166 180-283 (370)
332 1e3i_A Alcohol dehydrogenase, 93.1 0.5 1.7E-05 44.3 10.3 94 39-165 193-295 (376)
333 2zig_A TTHA0409, putative modi 93.0 0.087 3E-06 48.3 4.8 35 40-89 234-268 (297)
334 3gms_A Putative NADPH:quinone 93.0 0.27 9.2E-06 45.5 8.1 95 39-166 142-242 (340)
335 1qsg_A Enoyl-[acyl-carrier-pro 92.8 0.39 1.3E-05 42.5 8.7 76 42-128 9-96 (265)
336 3dqp_A Oxidoreductase YLBE; al 92.8 1.1 3.8E-05 38.1 11.3 71 43-130 1-74 (219)
337 1g60_A Adenine-specific methyl 92.8 0.17 5.8E-06 45.5 6.2 64 95-167 5-74 (260)
338 1cdo_A Alcohol dehydrogenase; 92.8 0.6 2.1E-05 43.7 10.3 94 39-165 190-292 (374)
339 3uog_A Alcohol dehydrogenase; 92.8 0.13 4.6E-06 48.1 5.8 95 39-166 187-286 (363)
340 2b5w_A Glucose dehydrogenase; 92.7 0.14 4.8E-06 47.8 5.8 89 43-166 174-272 (357)
341 3s2e_A Zinc-containing alcohol 92.7 0.17 5.8E-06 46.8 6.2 93 39-165 164-261 (340)
342 2jhf_A Alcohol dehydrogenase E 92.6 0.65 2.2E-05 43.4 10.3 94 39-165 189-291 (374)
343 2c7p_A Modification methylase 92.5 0.083 2.8E-06 49.6 3.9 98 42-166 11-119 (327)
344 1vj0_A Alcohol dehydrogenase, 92.4 0.16 5.6E-06 47.9 5.9 96 39-166 193-297 (380)
345 3ek2_A Enoyl-(acyl-carrier-pro 92.3 0.64 2.2E-05 40.8 9.3 79 40-129 12-102 (271)
346 2pd4_A Enoyl-[acyl-carrier-pro 92.2 0.33 1.1E-05 43.3 7.4 77 42-129 6-94 (275)
347 2h7i_A Enoyl-[acyl-carrier-pro 92.2 0.45 1.6E-05 42.3 8.3 76 42-128 7-96 (269)
348 3sxp_A ADP-L-glycero-D-mannohe 92.2 1.5 5.2E-05 40.2 12.2 75 41-129 9-100 (362)
349 2fzw_A Alcohol dehydrogenase c 92.1 0.69 2.4E-05 43.2 9.8 94 39-165 188-290 (373)
350 2pk3_A GDP-6-deoxy-D-LYXO-4-he 92.1 0.88 3E-05 40.8 10.2 80 35-129 5-84 (321)
351 4eez_A Alcohol dehydrogenase 1 92.1 0.34 1.2E-05 44.7 7.5 96 39-166 161-262 (348)
352 2dq4_A L-threonine 3-dehydroge 92.1 0.43 1.5E-05 44.1 8.2 90 41-165 164-260 (343)
353 1uay_A Type II 3-hydroxyacyl-C 92.0 1.2 4.2E-05 38.1 10.7 73 42-128 2-75 (242)
354 3pxx_A Carveol dehydrogenase; 92.0 0.58 2E-05 41.6 8.8 112 42-165 10-151 (287)
355 4id9_A Short-chain dehydrogena 91.8 1.3 4.3E-05 40.3 11.0 70 41-129 18-87 (347)
356 3orf_A Dihydropteridine reduct 91.8 1.1 3.8E-05 39.3 10.3 111 42-166 22-143 (251)
357 2q1w_A Putative nucleotide sug 91.8 2 6.7E-05 39.0 12.3 74 41-129 20-99 (333)
358 2fwm_X 2,3-dihydro-2,3-dihydro 91.7 1 3.6E-05 39.4 9.9 76 42-129 7-84 (250)
359 3oig_A Enoyl-[acyl-carrier-pro 91.6 2 6.8E-05 37.7 11.8 115 41-166 6-146 (266)
360 3k31_A Enoyl-(acyl-carrier-pro 91.6 1 3.5E-05 40.8 10.1 115 41-166 29-167 (296)
361 1ooe_A Dihydropteridine reduct 91.5 0.36 1.2E-05 41.9 6.6 75 42-128 3-81 (236)
362 3vtz_A Glucose 1-dehydrogenase 91.4 1.7 5.8E-05 38.7 11.1 77 41-129 13-91 (269)
363 1wma_A Carbonyl reductase [NAD 91.3 0.28 9.6E-06 42.9 5.7 114 41-165 3-136 (276)
364 2d8a_A PH0655, probable L-thre 91.2 0.23 7.8E-06 46.2 5.3 93 41-165 167-265 (348)
365 3ip1_A Alcohol dehydrogenase, 91.2 0.4 1.4E-05 45.6 7.1 102 39-166 211-317 (404)
366 1eg2_A Modification methylase 91.2 0.16 5.4E-06 47.5 4.2 65 95-168 39-107 (319)
367 3d7l_A LIN1944 protein; APC893 91.2 1.8 6.2E-05 36.1 10.6 64 43-128 4-67 (202)
368 1rjw_A ADH-HT, alcohol dehydro 91.1 0.38 1.3E-05 44.5 6.8 93 39-165 162-259 (339)
369 2eih_A Alcohol dehydrogenase; 90.9 0.39 1.3E-05 44.4 6.6 94 39-165 164-263 (343)
370 2p91_A Enoyl-[acyl-carrier-pro 90.9 0.49 1.7E-05 42.4 7.0 78 41-129 20-109 (285)
371 3rft_A Uronate dehydrogenase; 90.8 2.1 7E-05 37.8 11.1 70 43-129 4-74 (267)
372 3ijr_A Oxidoreductase, short c 90.8 1.2 4E-05 40.3 9.5 111 41-165 46-180 (291)
373 3grk_A Enoyl-(acyl-carrier-pro 90.6 0.99 3.4E-05 40.8 8.9 115 41-166 30-168 (293)
374 4egb_A DTDP-glucose 4,6-dehydr 90.6 1.5 5.1E-05 39.8 10.2 76 41-129 23-108 (346)
375 1rpn_A GDP-mannose 4,6-dehydra 90.5 1.2 4.3E-05 40.1 9.6 75 40-129 12-96 (335)
376 2hcy_A Alcohol dehydrogenase 1 90.5 0.6 2.1E-05 43.2 7.5 94 39-165 167-267 (347)
377 3uce_A Dehydrogenase; rossmann 90.4 1.1 3.9E-05 38.4 8.7 101 42-166 6-115 (223)
378 2wyu_A Enoyl-[acyl carrier pro 90.2 0.31 1.1E-05 43.1 5.1 78 41-129 7-96 (261)
379 3dii_A Short-chain dehydrogena 89.8 1 3.5E-05 39.4 8.1 74 43-128 3-84 (247)
380 2dtx_A Glucose 1-dehydrogenase 89.7 2 6.7E-05 38.1 10.0 75 42-129 8-84 (264)
381 2nm0_A Probable 3-oxacyl-(acyl 89.4 5.9 0.0002 34.8 12.8 74 42-128 21-96 (253)
382 3enk_A UDP-glucose 4-epimerase 89.4 2.2 7.6E-05 38.5 10.2 74 41-129 4-88 (341)
383 3tpc_A Short chain alcohol deh 89.3 2.1 7.1E-05 37.5 9.8 77 41-129 6-91 (257)
384 1db3_A GDP-mannose 4,6-dehydra 89.3 4.8 0.00017 36.7 12.7 72 43-129 2-88 (372)
385 4eye_A Probable oxidoreductase 89.1 0.88 3E-05 42.1 7.4 92 39-165 157-255 (342)
386 3ruf_A WBGU; rossmann fold, UD 89.1 1.3 4.5E-05 40.3 8.5 72 41-129 24-110 (351)
387 2h6e_A ADH-4, D-arabinose 1-de 89.1 0.59 2E-05 43.2 6.2 92 41-165 170-267 (344)
388 3is3_A 17BETA-hydroxysteroid d 89.0 0.99 3.4E-05 40.1 7.5 113 42-166 18-151 (270)
389 1yb5_A Quinone oxidoreductase; 88.9 0.74 2.5E-05 42.9 6.8 96 39-165 168-267 (351)
390 3fwz_A Inner membrane protein 88.9 0.43 1.5E-05 38.3 4.5 96 43-169 8-107 (140)
391 3ksu_A 3-oxoacyl-acyl carrier 88.5 2.9 9.9E-05 36.9 10.2 113 41-165 10-145 (262)
392 2z1m_A GDP-D-mannose dehydrata 88.2 3 0.0001 37.4 10.3 73 42-129 3-85 (345)
393 1yo6_A Putative carbonyl reduc 88.2 3.3 0.00011 35.4 10.1 76 42-129 3-91 (250)
394 3v2g_A 3-oxoacyl-[acyl-carrier 88.2 1.9 6.6E-05 38.4 8.9 112 41-166 30-164 (271)
395 4fs3_A Enoyl-[acyl-carrier-pro 88.2 3.7 0.00013 36.2 10.7 113 41-166 5-145 (256)
396 3gaz_A Alcohol dehydrogenase s 88.1 0.53 1.8E-05 43.6 5.2 91 39-165 148-244 (343)
397 1v3u_A Leukotriene B4 12- hydr 88.1 0.64 2.2E-05 42.6 5.7 95 39-165 143-242 (333)
398 2hun_A 336AA long hypothetical 88.0 4.1 0.00014 36.6 11.1 73 42-129 3-85 (336)
399 4b79_A PA4098, probable short- 87.9 7.6 0.00026 34.6 12.6 74 41-128 10-87 (242)
400 3rd5_A Mypaa.01249.C; ssgcid, 87.9 7.2 0.00025 34.7 12.5 75 41-129 15-96 (291)
401 3two_A Mannitol dehydrogenase; 87.9 0.86 2.9E-05 42.2 6.5 86 39-166 174-264 (348)
402 3uve_A Carveol dehydrogenase ( 87.8 2.8 9.5E-05 37.3 9.7 77 41-129 10-114 (286)
403 2oo3_A Protein involved in cat 87.7 0.73 2.5E-05 42.5 5.7 111 42-181 92-214 (283)
404 3mag_A VP39; methylated adenin 87.7 10 0.00035 35.1 13.3 111 41-164 60-174 (307)
405 3sx2_A Putative 3-ketoacyl-(ac 87.6 3.8 0.00013 36.2 10.4 77 41-129 12-112 (278)
406 4b7c_A Probable oxidoreductase 87.4 0.75 2.6E-05 42.2 5.7 93 39-165 147-246 (336)
407 4eso_A Putative oxidoreductase 87.2 0.76 2.6E-05 40.6 5.5 113 41-165 7-136 (255)
408 3p19_A BFPVVD8, putative blue 87.0 5.4 0.00018 35.3 11.1 76 42-129 16-97 (266)
409 3sc4_A Short chain dehydrogena 87.0 11 0.00036 33.6 13.1 77 41-129 8-103 (285)
410 3jyn_A Quinone oxidoreductase; 86.9 0.42 1.4E-05 43.9 3.6 95 39-166 138-238 (325)
411 3nrc_A Enoyl-[acyl-carrier-pro 86.8 1.8 6.3E-05 38.5 7.9 78 41-129 25-113 (280)
412 1uuf_A YAHK, zinc-type alcohol 86.7 1.3 4.5E-05 41.5 7.1 90 39-165 192-286 (369)
413 3tzq_B Short-chain type dehydr 86.6 3.5 0.00012 36.5 9.6 77 41-129 10-95 (271)
414 1wly_A CAAR, 2-haloacrylate re 86.6 0.96 3.3E-05 41.5 6.0 95 39-166 143-243 (333)
415 2o23_A HADH2 protein; HSD17B10 86.5 1.8 6.2E-05 37.7 7.5 77 41-129 11-96 (265)
416 3r3s_A Oxidoreductase; structu 86.5 1.6 5.5E-05 39.4 7.3 114 41-166 48-184 (294)
417 4dvj_A Putative zinc-dependent 86.4 1.2 4.1E-05 41.7 6.6 92 41-165 171-268 (363)
418 3dhn_A NAD-dependent epimerase 86.3 4.5 0.00015 34.1 9.8 70 43-129 5-77 (227)
419 1rkx_A CDP-glucose-4,6-dehydra 86.3 3.5 0.00012 37.5 9.6 72 42-128 9-89 (357)
420 4e6p_A Probable sorbitol dehyd 86.2 1.4 4.9E-05 38.7 6.7 77 41-129 7-92 (259)
421 3f9i_A 3-oxoacyl-[acyl-carrier 86.1 3.7 0.00013 35.4 9.3 75 40-128 12-93 (249)
422 3qwb_A Probable quinone oxidor 86.0 0.77 2.6E-05 42.2 5.0 93 39-165 146-245 (334)
423 2x4g_A Nucleoside-diphosphate- 86.0 2.4 8.2E-05 38.2 8.3 71 42-129 13-87 (342)
424 1qor_A Quinone oxidoreductase; 85.9 0.58 2E-05 42.8 4.0 96 39-165 138-237 (327)
425 3gem_A Short chain dehydrogena 85.9 2.9 0.0001 36.9 8.6 76 42-129 27-109 (260)
426 3swr_A DNA (cytosine-5)-methyl 85.8 0.74 2.5E-05 49.5 5.3 109 41-166 539-668 (1002)
427 1jvb_A NAD(H)-dependent alcoho 85.8 0.83 2.8E-05 42.3 5.1 96 39-165 168-269 (347)
428 1sby_A Alcohol dehydrogenase; 85.8 3.4 0.00012 35.9 8.9 74 42-129 5-94 (254)
429 1i24_A Sulfolipid biosynthesis 85.7 2.4 8.4E-05 39.2 8.4 80 35-129 4-110 (404)
430 1g60_A Adenine-specific methyl 85.7 0.64 2.2E-05 41.6 4.1 35 40-89 211-245 (260)
431 1spx_A Short-chain reductase f 85.5 1.5 5.3E-05 38.7 6.6 73 42-128 6-95 (278)
432 3e03_A Short chain dehydrogena 85.4 9.8 0.00034 33.6 11.9 77 41-129 5-100 (274)
433 3kvo_A Hydroxysteroid dehydrog 85.3 14 0.00047 34.3 13.3 76 41-128 44-138 (346)
434 3edm_A Short chain dehydrogena 85.3 3.7 0.00013 36.1 9.0 113 41-165 7-141 (259)
435 1cyd_A Carbonyl reductase; sho 85.3 3.6 0.00012 35.3 8.7 74 41-128 6-85 (244)
436 2cdc_A Glucose dehydrogenase g 85.2 0.77 2.6E-05 42.9 4.6 89 42-166 181-277 (366)
437 3llv_A Exopolyphosphatase-rela 85.1 1.1 3.7E-05 35.6 4.8 68 42-126 6-77 (141)
438 3t7c_A Carveol dehydrogenase; 85.1 6.1 0.00021 35.5 10.5 76 41-128 27-126 (299)
439 2py6_A Methyltransferase FKBM; 85.0 1 3.4E-05 43.3 5.4 39 40-89 225-263 (409)
440 1gy8_A UDP-galactose 4-epimera 85.0 6.2 0.00021 36.3 10.8 74 42-129 2-103 (397)
441 2cfc_A 2-(R)-hydroxypropyl-COM 85.0 6.5 0.00022 33.7 10.3 76 42-129 2-90 (250)
442 1piw_A Hypothetical zinc-type 85.0 0.84 2.9E-05 42.5 4.7 89 39-165 177-274 (360)
443 3r1i_A Short-chain type dehydr 84.9 2.7 9.3E-05 37.5 8.0 77 41-129 31-119 (276)
444 4ft4_B DNA (cytosine-5)-methyl 84.8 1 3.5E-05 46.7 5.7 55 42-105 212-273 (784)
445 3ioy_A Short-chain dehydrogena 84.7 1 3.5E-05 41.3 5.2 76 42-129 8-97 (319)
446 2c5a_A GDP-mannose-3', 5'-epim 84.7 8.2 0.00028 35.6 11.5 72 41-129 28-103 (379)
447 2j3h_A NADP-dependent oxidored 84.7 0.88 3E-05 41.8 4.7 93 39-165 153-253 (345)
448 3tjr_A Short chain dehydrogena 84.7 1.8 6.3E-05 39.1 6.8 77 41-129 30-118 (301)
449 1ek6_A UDP-galactose 4-epimera 84.6 4 0.00014 36.8 9.1 72 43-129 3-91 (348)
450 2gdz_A NAD+-dependent 15-hydro 84.5 3.2 0.00011 36.4 8.2 76 42-129 7-96 (267)
451 2ggs_A 273AA long hypothetical 84.5 4.7 0.00016 34.9 9.2 66 44-129 2-67 (273)
452 4a2c_A Galactitol-1-phosphate 84.5 2.6 9E-05 38.5 7.9 96 39-166 158-259 (346)
453 3o26_A Salutaridine reductase; 84.5 2.4 8.3E-05 37.6 7.4 77 41-129 11-101 (311)
454 1fmc_A 7 alpha-hydroxysteroid 84.4 6.2 0.00021 33.9 9.9 77 41-129 10-98 (255)
455 1sny_A Sniffer CG10964-PA; alp 84.4 6.8 0.00023 34.0 10.2 76 42-129 21-112 (267)
456 1t2a_A GDP-mannose 4,6 dehydra 84.4 4.3 0.00015 37.3 9.3 72 43-129 25-112 (375)
457 3gpi_A NAD-dependent epimerase 84.0 1.4 4.6E-05 39.1 5.5 70 42-128 3-72 (286)
458 1sb8_A WBPP; epimerase, 4-epim 83.8 4.3 0.00015 36.9 9.0 72 41-129 26-112 (352)
459 1yde_A Retinal dehydrogenase/r 83.8 4.8 0.00016 35.6 9.1 76 42-129 9-92 (270)
460 3lf2_A Short chain oxidoreduct 83.8 4.6 0.00016 35.5 8.9 77 41-129 7-97 (265)
461 3goh_A Alcohol dehydrogenase, 83.7 1.3 4.5E-05 40.2 5.4 84 39-166 140-228 (315)
462 3qiv_A Short-chain dehydrogena 83.6 3 0.0001 36.2 7.5 77 41-129 8-96 (253)
463 3s55_A Putative short-chain de 83.4 6.1 0.00021 34.9 9.6 77 41-129 9-109 (281)
464 2ag5_A DHRS6, dehydrogenase/re 83.4 6.4 0.00022 34.0 9.6 74 42-129 6-84 (246)
465 1hdo_A Biliverdin IX beta redu 83.2 11 0.00039 30.7 10.7 70 43-129 4-77 (206)
466 1rjd_A PPM1P, carboxy methyl t 83.1 2.8 9.4E-05 39.2 7.4 103 40-165 96-230 (334)
467 3h2s_A Putative NADH-flavin re 83.1 3.2 0.00011 34.9 7.3 67 44-129 2-72 (224)
468 2j8z_A Quinone oxidoreductase; 83.1 0.97 3.3E-05 42.0 4.3 97 39-166 160-260 (354)
469 1ja9_A 4HNR, 1,3,6,8-tetrahydr 82.9 1.7 6E-05 37.9 5.7 75 41-129 20-109 (274)
470 1xu9_A Corticosteroid 11-beta- 82.8 3.1 0.0001 37.0 7.4 74 41-126 27-113 (286)
471 2a4k_A 3-oxoacyl-[acyl carrier 82.8 2.6 8.9E-05 37.3 6.8 75 42-128 6-89 (263)
472 1w6u_A 2,4-dienoyl-COA reducta 82.7 4.2 0.00014 36.2 8.2 76 42-129 26-114 (302)
473 3un1_A Probable oxidoreductase 82.6 15 0.00052 32.1 11.9 77 41-129 27-106 (260)
474 4fc7_A Peroxisomal 2,4-dienoyl 82.5 2.6 9E-05 37.4 6.8 76 41-128 26-114 (277)
475 3nyw_A Putative oxidoreductase 82.3 7.4 0.00025 33.9 9.6 77 41-129 6-97 (250)
476 3h7a_A Short chain dehydrogena 82.2 4.2 0.00014 35.6 8.0 77 41-129 6-93 (252)
477 3d3w_A L-xylulose reductase; u 82.2 6.9 0.00024 33.4 9.2 75 41-129 6-86 (244)
478 3awd_A GOX2181, putative polyo 82.1 8.7 0.0003 33.1 10.0 77 41-129 12-100 (260)
479 3ay3_A NAD-dependent epimerase 82.0 5.4 0.00018 34.7 8.6 69 44-129 4-73 (267)
480 3svt_A Short-chain type dehydr 81.9 1.8 6.2E-05 38.5 5.5 76 41-128 10-100 (281)
481 1g0o_A Trihydroxynaphthalene r 81.8 4.1 0.00014 36.2 7.8 111 41-165 28-161 (283)
482 4dqx_A Probable oxidoreductase 81.7 9 0.00031 34.0 10.1 77 41-129 26-111 (277)
483 2v6g_A Progesterone 5-beta-red 81.6 25 0.00085 31.6 13.3 73 43-129 2-82 (364)
484 1n7h_A GDP-D-mannose-4,6-dehyd 81.5 4.8 0.00016 37.0 8.4 72 43-129 29-116 (381)
485 1yb1_A 17-beta-hydroxysteroid 81.5 3.4 0.00012 36.5 7.1 77 41-129 30-118 (272)
486 2q1s_A Putative nucleotide sug 81.5 4.9 0.00017 37.1 8.5 72 41-129 31-109 (377)
487 2zb4_A Prostaglandin reductase 81.5 2.2 7.6E-05 39.4 6.1 95 39-165 156-258 (357)
488 3t4x_A Oxidoreductase, short c 81.0 4.5 0.00015 35.7 7.7 75 41-129 9-95 (267)
489 2rh8_A Anthocyanidin reductase 80.9 9.7 0.00033 34.1 10.1 71 42-129 9-90 (338)
490 2ydy_A Methionine adenosyltran 80.9 4.8 0.00016 35.8 8.0 69 42-129 2-70 (315)
491 3fbg_A Putative arginate lyase 80.8 2.9 9.8E-05 38.6 6.6 91 41-165 150-246 (346)
492 3ehe_A UDP-glucose 4-epimerase 80.8 15 0.00051 32.5 11.3 67 44-129 3-73 (313)
493 2a35_A Hypothetical protein PA 80.7 1.1 3.7E-05 37.6 3.4 69 42-129 5-75 (215)
494 1id1_A Putative potassium chan 80.6 5.1 0.00018 32.1 7.4 67 43-126 4-78 (153)
495 3ged_A Short-chain dehydrogena 80.6 5 0.00017 35.8 7.9 72 43-128 3-84 (247)
496 1vpt_A VP39; RNA CAP, poly(A) 80.3 39 0.0013 31.7 14.3 110 41-164 75-189 (348)
497 2hq1_A Glucose/ribitol dehydro 80.3 7.3 0.00025 33.3 8.7 76 42-129 5-93 (247)
498 3gqv_A Enoyl reductase; medium 80.2 7.2 0.00025 36.3 9.2 91 40-165 163-261 (371)
499 2c20_A UDP-glucose 4-epimerase 80.1 5.6 0.00019 35.5 8.2 71 44-129 3-77 (330)
500 3v8b_A Putative dehydrogenase, 80.1 18 0.00062 32.1 11.6 77 41-129 27-115 (283)
No 1
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=100.00 E-value=1.5e-43 Score=312.71 Aligned_cols=181 Identities=28% Similarity=0.390 Sum_probs=160.1
Q ss_pred HHhCCchhhhhhHHhhhHHcCCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCCCCCcE
Q 021161 17 KEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVI 96 (316)
Q Consensus 17 k~~g~raRsa~KL~qId~~f~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~i~gV~ 96 (316)
+++|||+||+|||+||+++|++++++.+|||||||||+|+++++++ . ++|+|||++++.++++|+
T Consensus 1 ~~~~yr~Ra~~KL~ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~-~--------------~~V~gvD~~~~~~~~~v~ 65 (191)
T 3dou_A 1 MSLQLRSRAAFKLEFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSL-A--------------RKIISIDLQEMEEIAGVR 65 (191)
T ss_dssp ---CTTSHHHHHHHHHHHHHCCSCTTCEEEEESCTTCHHHHHHTTT-C--------------SEEEEEESSCCCCCTTCE
T ss_pred CCCCCCCcHHHHHHHHHHHcCCCCCCCEEEEEeecCCHHHHHHHHc-C--------------CcEEEEeccccccCCCeE
Confidence 4789999999999999999999999999999999999999999876 2 699999999999999999
Q ss_pred EEecCccChhhHHHHHhhcC---CccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCCCH
Q 021161 97 QVQGDITNARTAEVVIRHFD---GCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDT 173 (316)
Q Consensus 97 ~i~gDIt~~~t~~~I~~~~~---~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~~~ 173 (316)
++++|+++..+...+.+.+. .++||+|+||++|+++|.+..|+..+..++..++..+.++|||||+|++|+|++...
T Consensus 66 ~~~~D~~~~~~~~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~~ 145 (191)
T 3dou_A 66 FIRCDIFKETIFDDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDMT 145 (191)
T ss_dssp EEECCTTSSSHHHHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTHH
T ss_pred EEEccccCHHHHHHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCCH
Confidence 99999999887777766554 138999999999999999999998889999999999999999999999999999988
Q ss_pred HHHHHHHHhcCCceEEecCCCCCCCCcceEEEEecccCC
Q 021161 174 SLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVCENYFPP 212 (316)
Q Consensus 174 ~~l~~~l~~~F~~V~~~KP~sSR~~S~E~fvVc~gf~~p 212 (316)
..+...++.+|..|.+.||.+||..|+|.|+||+||+..
T Consensus 146 ~~~~~~l~~~F~~v~~~kP~asR~~s~E~y~v~~~~~~~ 184 (191)
T 3dou_A 146 NDFIAIWRKNFSSYKISKPPASRGSSSEIYIMFFGFKAE 184 (191)
T ss_dssp HHHHHHHGGGEEEEEEECC------CCEEEEEEEEECCC
T ss_pred HHHHHHHHHhcCEEEEECCCCccCCCceEEEEEeeeccc
Confidence 899999999999999999999999999999999999864
No 2
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=100.00 E-value=8.6e-39 Score=296.88 Aligned_cols=182 Identities=21% Similarity=0.184 Sum_probs=156.0
Q ss_pred hCCchhhhhhHHhhhHHcCCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCC---CCCCC--
Q 021161 19 EGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQP---MAPIE-- 93 (316)
Q Consensus 19 ~g~raRsa~KL~qId~~f~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~---~~~i~-- 93 (316)
.+||+||||||+||+++| +++++.+|||||||||+|+|+++++.+ ...|+|+|+.. +.|++
T Consensus 69 g~YrSRAAfKL~ei~eK~-~Lk~~~~VLDLGaAPGGWsQvAa~~~g-------------v~sV~GvdvG~d~~~~pi~~~ 134 (282)
T 3gcz_A 69 GIAVSRGSAKLRWMEERG-YVKPTGIVVDLGCGRGGWSYYAASLKN-------------VKKVMAFTLGVQGHEKPIMRT 134 (282)
T ss_dssp SBCSSTHHHHHHHHHHTT-SCCCCEEEEEETCTTCHHHHHHHTSTT-------------EEEEEEECCCCTTSCCCCCCC
T ss_pred CCEecHHHHHHHHHHHhc-CCCCCCEEEEeCCCCCHHHHHHHHhcC-------------CCeeeeEEeccCccccccccc
Confidence 479999999999999999 889999999999999999999997653 34788999964 33443
Q ss_pred --C--cEEEecCccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCC--cEEEEEE
Q 021161 94 --G--VIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEG--GKFIAKI 167 (316)
Q Consensus 94 --g--V~~i~gDIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpG--G~fV~Ki 167 (316)
+ +..++.++.. ..+.++++|+|+||+||+ +|++..|++.++.| |.+|.++|+|| |+||+|+
T Consensus 135 ~~g~~ii~~~~~~dv--------~~l~~~~~DvVLSDmApn-sG~~~~D~~rs~~L----L~~A~~~Lk~g~~G~Fv~Kv 201 (282)
T 3gcz_A 135 TLGWNLIRFKDKTDV--------FNMEVIPGDTLLCDIGES-SPSIAVEEQRTLRV----LNCAKQWLQEGNYTEFCIKV 201 (282)
T ss_dssp BTTGGGEEEECSCCG--------GGSCCCCCSEEEECCCCC-CSCHHHHHHHHHHH----HHHHHHHHHHHCCCEEEEEE
T ss_pred cCCCceEEeeCCcch--------hhcCCCCcCEEEecCccC-CCChHHHHHHHHHH----HHHHHHHcCCCCCCcEEEEE
Confidence 3 3334433221 125668999999999999 99999999988777 88999999999 9999999
Q ss_pred cc--CCCHHHHHHHHHhcCCceEEecCCCCCCCCcceEEEEecccCCCCCCCccchhhhhhcC
Q 021161 168 FR--GKDTSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVCENYFPPEGFNPKDLHRLLEKVG 228 (316)
Q Consensus 168 f~--~~~~~~l~~~l~~~F~~V~~~KP~sSR~~S~E~fvVc~gf~~p~~~~p~~~~~~~~~~~ 228 (316)
|+ +.+...+++.|+.+|+.|.+.|| +||++|.|.|+||++..++.+.++.+.++++..+.
T Consensus 202 F~pyg~~~~~l~~~lk~~F~~V~~~KP-aSR~~S~E~Y~V~~~r~n~~~~v~~~s~~l~~r~~ 263 (282)
T 3gcz_A 202 LCPYTPLIMEELSRLQLKHGGGLVRVP-LSRNSTHEMYWVSGTRTDVVGTVSNVSRLLTRRML 263 (282)
T ss_dssp SCCCSHHHHHHHHHHHHHHCCEEECCT-TSCTTCCCEEEETTCCCCSHHHHHHHHHHHHHHHH
T ss_pred ecCCCccHHHHHHHHHHhcCCEEEEcC-CCcccCcceeEEEecCCCccchHHHHHHHHHHHHh
Confidence 99 88999999999999999999999 99999999999999999999999999888887643
No 3
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=100.00 E-value=4.1e-38 Score=294.00 Aligned_cols=179 Identities=18% Similarity=0.183 Sum_probs=155.9
Q ss_pred hCCchhhhhhHHhhhHHcCCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCC---CCCC--
Q 021161 19 EGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM---APIE-- 93 (316)
Q Consensus 19 ~g~raRsa~KL~qId~~f~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~---~~i~-- 93 (316)
-+||+||||||+||+++ ++++++.+|||||||||||+|+++++.+ ...|+|+|+... .|+.
T Consensus 60 g~yrSRaa~KL~ei~ek-~l~~~g~~vlDLGaaPGgWsqva~~~~g-------------v~sV~Gvdlg~~~~~~P~~~~ 125 (300)
T 3eld_A 60 GISVSRGAAKIRWLHER-GYLRITGRVLDLGCGRGGWSYYAAAQKE-------------VMSVKGYTLGIEGHEKPIHMQ 125 (300)
T ss_dssp CCCSSTTHHHHHHHHHH-TSCCCCEEEEEETCTTCHHHHHHHTSTT-------------EEEEEEECCCCTTSCCCCCCC
T ss_pred CCccchHHHHHHHHHHh-CCCCCCCEEEEcCCCCCHHHHHHHHhcC-------------CceeeeEEecccccccccccc
Confidence 37999999999999999 9999999999999999999999998653 247889999753 2222
Q ss_pred ----CcEEEec--CccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCC-cEEEEE
Q 021161 94 ----GVIQVQG--DITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEG-GKFIAK 166 (316)
Q Consensus 94 ----gV~~i~g--DIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpG-G~fV~K 166 (316)
.+..+.. |+. .+.++++|+|+||+||+ +|++..|++.+.+| |.+|.++|+|| |+||+|
T Consensus 126 ~~~~~iv~~~~~~di~----------~l~~~~~DlVlsD~APn-sG~~~~D~~rs~~L----L~~A~~~LkpG~G~FV~K 190 (300)
T 3eld_A 126 TLGWNIVKFKDKSNVF----------TMPTEPSDTLLCDIGES-SSNPLVERDRTMKV----LENFERWKHVNTENFCVK 190 (300)
T ss_dssp BTTGGGEEEECSCCTT----------TSCCCCCSEEEECCCCC-CSSHHHHHHHHHHH----HHHHHHHCCTTCCEEEEE
T ss_pred ccCCceEEeecCceee----------ecCCCCcCEEeecCcCC-CCCHHHHHHHHHHH----HHHHHHHhcCCCCcEEEE
Confidence 2222332 332 24568999999999999 99999999988888 88999999999 999999
Q ss_pred Ecc--CCCHHHHHHHHHhcCCceEEecCCCCCCCCcceEEEEecccCCCCCCCccchhhhhhc
Q 021161 167 IFR--GKDTSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVCENYFPPEGFNPKDLHRLLEKV 227 (316)
Q Consensus 167 if~--~~~~~~l~~~l~~~F~~V~~~KP~sSR~~S~E~fvVc~gf~~p~~~~p~~~~~~~~~~ 227 (316)
+|+ +.+...++++|+.+|+.|.+.|| +||++|.|.|+||.+..++.+.++.+.++++..+
T Consensus 191 vF~~yG~~~~~ll~~lk~~F~~V~~~KP-aSR~~S~E~Y~V~~~r~n~~~~v~~~~~~l~~r~ 252 (300)
T 3eld_A 191 VLAPYHPDVIEKLERLQLRFGGGIVRVP-FSRNSTHEMYYISGARNNITHMVNTTSRSLLRRM 252 (300)
T ss_dssp ESSTTSHHHHHHHHHHHHHHCCEEECCT-TSCTTCCCEEEESSCCCCHHHHHHHHHHHHHHHH
T ss_pred eccccCccHHHHHHHHHHhCCcEEEEeC-CCCCCChHHeeeccCCCCcchhHHHHHHHHHHHH
Confidence 999 99999999999999999999999 9999999999999999999999999989998764
No 4
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=100.00 E-value=6.5e-38 Score=290.60 Aligned_cols=184 Identities=19% Similarity=0.188 Sum_probs=155.0
Q ss_pred CCchhhhhhHHhhhHHcCCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCCCC------
Q 021161 20 GWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIE------ 93 (316)
Q Consensus 20 g~raRsa~KL~qId~~f~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~i~------ 93 (316)
+||+||||||+||+++ .+++++.+|||||||||+|+|+++++.+.. ...+.++++|+ ++.+++
T Consensus 54 ~YrSRaA~KL~ei~ek-~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~---------~v~g~dVGvDl-~~~pi~~~~~g~ 122 (277)
T 3evf_A 54 VAVSRGTAKLRWFHER-GYVKLEGRVIDLGCGRGGWCYYAAAQKEVS---------GVKGFTLGRDG-HEKPMNVQSLGW 122 (277)
T ss_dssp BCSSTHHHHHHHHHHT-TSSCCCEEEEEETCTTCHHHHHHHTSTTEE---------EEEEECCCCTT-CCCCCCCCBTTG
T ss_pred CccccHHHHHHHHHHh-CCCCCCCEEEEecCCCCHHHHHHHHhcCCC---------cceeEEEeccC-cccccccCcCCC
Confidence 4999999999999999 788999999999999999999998764310 00123445554 454554
Q ss_pred CcEEEecCccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCC-cEEEEEEcc--C
Q 021161 94 GVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEG-GKFIAKIFR--G 170 (316)
Q Consensus 94 gV~~i~gDIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpG-G~fV~Kif~--~ 170 (316)
++.++++++... .+.++++|+|+||++|+ +|++..|++.+..| |.+|.++|+|| |+||+|+|+ +
T Consensus 123 ~ii~~~~~~dv~--------~l~~~~~DlVlsD~apn-sG~~~~D~~rs~~L----L~~a~~~LkpG~G~FV~KVf~pyg 189 (277)
T 3evf_A 123 NIITFKDKTDIH--------RLEPVKCDTLLCDIGES-SSSSVTEGERTVRV----LDTVEKWLACGVDNFCVKVLAPYM 189 (277)
T ss_dssp GGEEEECSCCTT--------TSCCCCCSEEEECCCCC-CSCHHHHHHHHHHH----HHHHHHHHTTCCSEEEEEESCTTS
T ss_pred CeEEEeccceeh--------hcCCCCccEEEecCccC-cCchHHHHHHHHHH----HHHHHHHhCCCCCeEEEEecCCCC
Confidence 456677776321 35678999999999999 99999999888777 88999999999 999999999 8
Q ss_pred CCHHHHHHHHHhcCCceEEecCCCCCCCCcceEEEEecccCCCCCCCccchhhhhhcC
Q 021161 171 KDTSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVCENYFPPEGFNPKDLHRLLEKVG 228 (316)
Q Consensus 171 ~~~~~l~~~l~~~F~~V~~~KP~sSR~~S~E~fvVc~gf~~p~~~~p~~~~~~~~~~~ 228 (316)
.+...+++.|+.+|+.|.+.|| +||++|.|.|+||++..++.+.++.+.++++..+.
T Consensus 190 ~~~~~l~~~lk~~F~~V~~~KP-aSR~~S~E~Y~V~~~r~n~~~~v~~~s~~l~~r~~ 246 (277)
T 3evf_A 190 PDVLEKLELLQRRFGGTVIRNP-LSRNSTHEMYYVSGARSNVTFTVNQTSRLLMRRMR 246 (277)
T ss_dssp HHHHHHHHHHHHHHCCEEECCT-TSCTTCCCEEEESSCCCCHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHhcCCEEEEeC-CCCCCCCceEEEEecCCCccchHHHHHHHHHHHHh
Confidence 8999999999999999999999 99999999999999999999999998888887643
No 5
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=100.00 E-value=5.4e-38 Score=287.73 Aligned_cols=168 Identities=21% Similarity=0.137 Sum_probs=139.9
Q ss_pred CCchhhhhhHHhhhHHcCCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEe--CCCCCCC-CCcE
Q 021161 20 GWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAID--LQPMAPI-EGVI 96 (316)
Q Consensus 20 g~raRsa~KL~qId~~f~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVD--l~~~~~i-~gV~ 96 (316)
+||+||+|||+||++++ +++++++|||||||||||||+++++.+-. .-.+.|+|+| +.||.++ +||.
T Consensus 53 ~yRSRAayKL~EIdeK~-likpg~~VVDLGaAPGGWSQvAa~~~~vg---------~V~G~vig~D~~~~P~~~~~~Gv~ 122 (269)
T 2px2_A 53 HPVSRGTAKLRWLVERR-FVQPIGKVVDLGCGRGGWSYYAATMKNVQ---------EVRGYTKGGPGHEEPMLMQSYGWN 122 (269)
T ss_dssp CCSSTHHHHHHHHHHTT-SCCCCEEEEEETCTTSHHHHHHTTSTTEE---------EEEEECCCSTTSCCCCCCCSTTGG
T ss_pred CcccHHHHHHHHHHHcC-CCCCCCEEEEcCCCCCHHHHHHhhhcCCC---------CceeEEEccccccCCCcccCCCce
Confidence 79999999999999998 99999999999999999999999873200 0136889999 6666666 7884
Q ss_pred ---EEec-CccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCc-EEEEEEccC-
Q 021161 97 ---QVQG-DITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGG-KFIAKIFRG- 170 (316)
Q Consensus 97 ---~i~g-DIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG-~fV~Kif~~- 170 (316)
+++| |+++. ++.++|+|+||+||+ +|++..|+..+.. ||..|.++|+||| .||+|+|.+
T Consensus 123 ~i~~~~G~Df~~~----------~~~~~DvVLSDMAPn-SG~~~vD~~Rs~~----aL~~A~~~Lk~gG~~FvvKVFqg~ 187 (269)
T 2px2_A 123 IVTMKSGVDVFYK----------PSEISDTLLCDIGES-SPSAEIEEQRTLR----ILEMVSDWLSRGPKEFCIKILCPY 187 (269)
T ss_dssp GEEEECSCCGGGS----------CCCCCSEEEECCCCC-CSCHHHHHHHHHH----HHHHHHHHHTTCCSEEEEEESCTT
T ss_pred EEEeeccCCccCC----------CCCCCCEEEeCCCCC-CCccHHHHHHHHH----HHHHHHHHhhcCCcEEEEEECCCC
Confidence 4447 99973 356899999999998 9999888876654 8899999999999 999999997
Q ss_pred -CCHHHHHHHHHhcCCceEEecCCCCCCCCcceEEEEecccCCC
Q 021161 171 -KDTSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVCENYFPPE 213 (316)
Q Consensus 171 -~~~~~l~~~l~~~F~~V~~~KP~sSR~~S~E~fvVc~gf~~p~ 213 (316)
..+..++..++..|..|.+ ||.+||++|.|.|+||..-....
T Consensus 188 ~~~~~~~l~~lk~~F~~vkv-k~paSR~~S~E~YlVa~~~~n~~ 230 (269)
T 2px2_A 188 MPKVIEKLESLQRRFGGGLV-RVPLSRNSNHEMYWVSGASGNIV 230 (269)
T ss_dssp SHHHHHHHHHHHHHHCCEEE-CCTTSCTTCCCEEEETTCCSCHH
T ss_pred chHHHHHHHHHHHHcCCEEE-ECCCCCCCCccEEEEecccCcHH
Confidence 4455667899999999997 55599999999999987654443
No 6
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=100.00 E-value=2.6e-34 Score=250.97 Aligned_cols=183 Identities=30% Similarity=0.483 Sum_probs=156.8
Q ss_pred CCchhhhhhHHhhhHHcCCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCCCCCcEEEe
Q 021161 20 GWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQ 99 (316)
Q Consensus 20 g~raRsa~KL~qId~~f~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~i~gV~~i~ 99 (316)
|||+||+|||+|++++|++++++.+|||||||||+|+..++++++. ..++|+|+|+++++..+++++++
T Consensus 1 ~~~~r~~~kl~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~-----------~~~~v~gvD~s~~~~~~~v~~~~ 69 (201)
T 2plw_A 1 NYRSRAAYKLIELDNKYLFLKKNKIILDIGCYPGSWCQVILERTKN-----------YKNKIIGIDKKIMDPIPNVYFIQ 69 (201)
T ss_dssp -CCSTTHHHHHHHHHHHCCCCTTEEEEEESCTTCHHHHHHHHHTTT-----------SCEEEEEEESSCCCCCTTCEEEE
T ss_pred CcchHHHHHHHHHHHHcCCCCCCCEEEEeCCCCCHHHHHHHHHcCC-----------CCceEEEEeCCccCCCCCceEEE
Confidence 7999999999999999999999999999999999999999998740 14799999999998888999999
Q ss_pred cCccChh-----------------hHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcE
Q 021161 100 GDITNAR-----------------TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGK 162 (316)
Q Consensus 100 gDIt~~~-----------------t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~ 162 (316)
+|+++.. ....+.+.+...+||+|+||+++..+|.+..++..+.+++..++..+.++|||||.
T Consensus 70 ~d~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~ 149 (201)
T 2plw_A 70 GEIGKDNMNNIKNINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGT 149 (201)
T ss_dssp CCTTTTSSCCC-----------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEE
T ss_pred ccccchhhhhhccccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCE
Confidence 9999865 33444444666789999999998888887777777777888899999999999999
Q ss_pred EEEEEccCCCHHHHHHHHHhcCCceEEecCCCCCCCCcceEEEEecccCCC
Q 021161 163 FIAKIFRGKDTSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVCENYFPPE 213 (316)
Q Consensus 163 fV~Kif~~~~~~~l~~~l~~~F~~V~~~KP~sSR~~S~E~fvVc~gf~~p~ 213 (316)
|+++++.+.+...+...++..|..+.+.||.++|..|.|.|+||++|+++.
T Consensus 150 lv~~~~~~~~~~~l~~~l~~~f~~v~~~~~~~~r~~s~e~y~v~~~~~~~~ 200 (201)
T 2plw_A 150 YIVKMYLGSQTNNLKTYLKGMFQLVHTTKPKASRNESREIYLVCKNFLGRK 200 (201)
T ss_dssp EEEEEECSTTHHHHHHHHHTTEEEEEECCCC-----CCEEEEEEEEECCC-
T ss_pred EEEEEeCCCCHHHHHHHHHHHHheEEEECCcccCCcCceEEEEEecCccCC
Confidence 999999988888899999999999999999999999999999999999864
No 7
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=100.00 E-value=1.2e-33 Score=245.49 Aligned_cols=194 Identities=32% Similarity=0.548 Sum_probs=158.1
Q ss_pred CCchhhhhhHHhhhHHcCCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCCCCCcEEE-
Q 021161 20 GWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQV- 98 (316)
Q Consensus 20 g~raRsa~KL~qId~~f~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~i~gV~~i- 98 (316)
|||+|++|||++++++|++++++.+|||||||||.|+..++++++... .....+.++|+|+|+++++.++++.++
T Consensus 1 ~~~~r~~~kl~~l~~~~~~~~~~~~vLDlGcG~G~~~~~la~~~~~~~----~~~~~~~~~v~~vD~s~~~~~~~~~~~~ 76 (196)
T 2nyu_A 1 SYRSRSAFKLLEVNERHQILRPGLRVLDCGAAPGAWSQVAVQKVNAAG----TDPSSPVGFVLGVDLLHIFPLEGATFLC 76 (196)
T ss_dssp CCSSTHHHHHHHHHHHHCCCCTTCEEEEETCCSCHHHHHHHHHTTTTC----CCTTSCCCEEEEECSSCCCCCTTCEEEC
T ss_pred CchhHHHHHHHHHHHhcCCCCCCCEEEEeCCCCCHHHHHHHHHhcccc----ccccCCCceEEEEechhcccCCCCeEEE
Confidence 799999999999999999999999999999999999999999874100 000112379999999999888899999
Q ss_pred ecCccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCCCHHHHHH
Q 021161 99 QGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYC 178 (316)
Q Consensus 99 ~gDIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~~~~~l~~ 178 (316)
++|+++......+...+++++||+|+||++++++|.+..++..+.++...++..+.++|||||+|+++++.+.+...+..
T Consensus 77 ~~d~~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~ 156 (196)
T 2nyu_A 77 PADVTDPRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQSRRLQR 156 (196)
T ss_dssp SCCTTSHHHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSGGGHHHHH
T ss_pred eccCCCHHHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCccHHHHHH
Confidence 99999887666666666667899999999999999887787777777888999999999999999999998888888888
Q ss_pred HHHhcCCceEEecCCCCCCCCcceEEEEecccCCCCCCC
Q 021161 179 QLKLFFPVVTFAKPKSSRNSSIEAFAVCENYFPPEGFNP 217 (316)
Q Consensus 179 ~l~~~F~~V~~~KP~sSR~~S~E~fvVc~gf~~p~~~~p 217 (316)
.++.+|..+.+.||.++|..+.|.|++|.||+.+.+|.|
T Consensus 157 ~l~~~f~~v~~~~~~~~~~~~~e~~~v~~g~~~~~~~~~ 195 (196)
T 2nyu_A 157 RLTEEFQNVRIIKPEASRKESSEVYFLATQYHGRKGTVK 195 (196)
T ss_dssp HHHHHEEEEEEECCC--------EEEEEEEECCC-----
T ss_pred HHHHHhcceEEECCcccCccCceEEEEeeecCCcccccC
Confidence 888899999999999999999999999999999999877
No 8
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=99.96 E-value=1.1e-28 Score=223.18 Aligned_cols=156 Identities=21% Similarity=0.159 Sum_probs=133.8
Q ss_pred hCCchhhhhhHHhhhHHcCCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCCC------
Q 021161 19 EGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPI------ 92 (316)
Q Consensus 19 ~g~raRsa~KL~qId~~f~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~i------ 92 (316)
.+||+|++|||.+|+++| +++++++|||||||||||||+++...+ ..+|+|+|+..+...
T Consensus 57 g~yrSRa~~KL~ei~ek~-~l~~g~~VvDLGaapGGWSq~~a~~~g-------------~~~V~avdvG~~ghe~P~~~~ 122 (267)
T 3p8z_A 57 HHAVSRGSAKLQWFVERN-MVIPEGRVIDLGCGRGGWSYYCAGLKK-------------VTEVRGYTKGGPGHEEPVPMS 122 (267)
T ss_dssp SCCSSTHHHHHHHHHHTT-SSCCCEEEEEESCTTSHHHHHHHTSTT-------------EEEEEEECCCSTTSCCCCCCC
T ss_pred CCccchHHHHHHHHHHhc-CCCCCCEEEEcCCCCCcHHHHHHHhcC-------------CCEEEEEecCCCCccCcchhh
Confidence 379999999999999999 789999999999999999999987653 248999999997432
Q ss_pred ----CCcEEEec-CccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEE
Q 021161 93 ----EGVIQVQG-DITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (316)
Q Consensus 93 ----~gV~~i~g-DIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Ki 167 (316)
++|++.++ |+... ...++|.|+||++| .+|....|+... +.+|..+.+.|++ |.|++|+
T Consensus 123 s~gwn~v~fk~gvDv~~~----------~~~~~DtllcDIge-Ss~~~~vE~~Rt----lrvLela~~wL~~-~~fc~KV 186 (267)
T 3p8z_A 123 TYGWNIVKLMSGKDVFYL----------PPEKCDTLLCDIGE-SSPSPTVEESRT----IRVLKMVEPWLKN-NQFCIKV 186 (267)
T ss_dssp CTTTTSEEEECSCCGGGC----------CCCCCSEEEECCCC-CCSCHHHHHHHH----HHHHHHHGGGCSS-CEEEEEE
T ss_pred hcCcCceEEEeccceeec----------CCccccEEEEecCC-CCCChhhhhhHH----HHHHHHHHHhccc-CCEEEEE
Confidence 57899999 98643 34789999999999 777766665433 3488999999999 8999999
Q ss_pred ccCCC--HHHHHHHHHhcCCceEEecCCCCCCCCcceEEE
Q 021161 168 FRGKD--TSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAV 205 (316)
Q Consensus 168 f~~~~--~~~l~~~l~~~F~~V~~~KP~sSR~~S~E~fvV 205 (316)
|.+.. +.+.+..|+..|..+.+.||. ||++|.|.|+|
T Consensus 187 l~py~p~v~e~l~~lq~~fgg~lVR~P~-SRnsThEMY~V 225 (267)
T 3p8z_A 187 LNPYMPTVIEHLERLQRKHGGMLVRNPL-SRNSTHEMYWI 225 (267)
T ss_dssp SCCCSHHHHHHHHHHHHHHCCEEECCTT-SCTTCCCEEEE
T ss_pred ccCCChhHHHHHHHHHHHhCCEeEeCCC-CCCCcceEEEE
Confidence 99987 667778889999999999999 99999999999
No 9
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.95 E-value=4.7e-29 Score=231.24 Aligned_cols=173 Identities=18% Similarity=0.209 Sum_probs=144.5
Q ss_pred CCchhhhhhHHhhhHHcCCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCC------CCCC
Q 021161 20 GWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM------APIE 93 (316)
Q Consensus 20 g~raRsa~KL~qId~~f~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~------~~i~ 93 (316)
.|++|+++||.+++++ .+++++.+|||||||||+|+++++++ ++|+|||+++| .+++
T Consensus 54 ~~~sR~a~KL~~i~~~-~~~~~g~~VLDlGcGtG~~s~~la~~----------------~~V~gvD~s~m~~~a~~~~~~ 116 (265)
T 2oxt_A 54 LSVSRGTAKLAWMEER-GYVELTGRVVDLGCGRGGWSYYAASR----------------PHVMDVRAYTLGVGGHEVPRI 116 (265)
T ss_dssp BCSSTHHHHHHHHHHH-TSCCCCEEEEEESCTTSHHHHHHHTS----------------TTEEEEEEECCCCSSCCCCCC
T ss_pred CccchHHHHHHHHHHc-CCCCCCCEEEEeCcCCCHHHHHHHHc----------------CcEEEEECchhhhhhhhhhhh
Confidence 5899999999999999 88899999999999999999999874 37999999998 4444
Q ss_pred ------CcEEE--ecCccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCc--EE
Q 021161 94 ------GVIQV--QGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGG--KF 163 (316)
Q Consensus 94 ------gV~~i--~gDIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG--~f 163 (316)
+|.++ ++|+++. +.++||+|+||++ ..++.+..|+..+ ..+|..+.++||||| .|
T Consensus 117 ~~~~~~~v~~~~~~~D~~~l----------~~~~fD~V~sd~~-~~~~~~~~d~~~~----l~~L~~~~r~LkpGG~~~f 181 (265)
T 2oxt_A 117 TESYGWNIVKFKSRVDIHTL----------PVERTDVIMCDVG-ESSPKWSVESERT----IKILELLEKWKVKNPSADF 181 (265)
T ss_dssp CCBTTGGGEEEECSCCTTTS----------CCCCCSEEEECCC-CCCSCHHHHHHHH----HHHHHHHHHHHHHCTTCEE
T ss_pred hhccCCCeEEEecccCHhHC----------CCCCCcEEEEeCc-ccCCccchhHHHH----HHHHHHHHHHhccCCCeEE
Confidence 78999 9999873 3578999999988 6777665554432 227888999999999 99
Q ss_pred EEEEccCCCHH---HHHHHHHhcCCceEEecCCCCCCCCcceEEEEecccCCCCCCCccchhhhhh
Q 021161 164 IAKIFRGKDTS---LLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVCENYFPPEGFNPKDLHRLLEK 226 (316)
Q Consensus 164 V~Kif~~~~~~---~l~~~l~~~F~~V~~~KP~sSR~~S~E~fvVc~gf~~p~~~~p~~~~~~~~~ 226 (316)
++|+|. .... .++..++..|..|.+.| .+||++|.|.|+||.++..+.++++.+...+++.
T Consensus 182 v~kv~~-~~~~~~~~~l~~l~~~f~~v~~~k-~~sR~~s~E~y~v~~~~~~~~~~~~~~~~~l~~r 245 (265)
T 2oxt_A 182 VVKVLC-PYSVEVMERLSVMQRKWGGGLVRN-PYSRNSTHEMYFTSRAGGNIIGAVTACTERLLGR 245 (265)
T ss_dssp EEEESC-TTSHHHHHHHHHHHHHHCCEEECC-TTSCTTCCCEEEESSCCSCHHHHHHHHHHHHHHT
T ss_pred EEEeCC-CCChhHHHHHHHHHHHcCCEEEEE-ecccCCCccEEEEecCCCCcchhhHHHHHHHHHH
Confidence 999998 4444 67777888899999999 8999999999999999988888877655555554
No 10
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.95 E-value=1e-28 Score=233.21 Aligned_cols=173 Identities=20% Similarity=0.124 Sum_probs=140.4
Q ss_pred hCCchhhhhhHHhhhHHcCCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeC----CC--CC--
Q 021161 19 EGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDL----QP--MA-- 90 (316)
Q Consensus 19 ~g~raRsa~KL~qId~~f~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl----~~--~~-- 90 (316)
.+||+|++|||.+|+++ .+++++.+|||||||||+|+++++++ ++|+|||+ ++ |.
T Consensus 61 ~~~~sR~a~KL~~i~~~-~~~~~g~~VLDlGcG~G~~s~~la~~----------------~~V~gvD~~~~~~~~~~~~~ 123 (305)
T 2p41_A 61 HHAVSRGSAKLRWFVER-NLVTPEGKVVDLGCGRGGWSYYCGGL----------------KNVREVKGLTKGGPGHEEPI 123 (305)
T ss_dssp SCCSSTHHHHHHHHHHT-TSSCCCEEEEEETCTTSHHHHHHHTS----------------TTEEEEEEECCCSTTSCCCC
T ss_pred CCccccHHHHHHHHHHc-CCCCCCCEEEEEcCCCCHHHHHHHhc----------------CCEEEEeccccCchhHHHHH
Confidence 46899999999999999 88899999999999999999999875 36999998 33 21
Q ss_pred ---CC--CCcEEEec-CccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEE
Q 021161 91 ---PI--EGVIQVQG-DITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFI 164 (316)
Q Consensus 91 ---~i--~gV~~i~g-DIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV 164 (316)
+. ++|+++++ |+++.+ .++||+|+||+++. +|.+..|+..+ +.+|..+.++|||||.|+
T Consensus 124 ~~~~~~~~~v~~~~~~D~~~l~----------~~~fD~V~sd~~~~-~g~~~~d~~~~----l~~L~~~~~~LkpGG~~v 188 (305)
T 2p41_A 124 PMSTYGWNLVRLQSGVDVFFIP----------PERCDTLLCDIGES-SPNPTVEAGRT----LRVLNLVENWLSNNTQFC 188 (305)
T ss_dssp CCCSTTGGGEEEECSCCTTTSC----------CCCCSEEEECCCCC-CSSHHHHHHHH----HHHHHHHHHHCCTTCEEE
T ss_pred HhhhcCCCCeEEEeccccccCC----------cCCCCEEEECCccc-cCcchhhHHHH----HHHHHHHHHHhCCCCEEE
Confidence 22 56899999 988642 35899999999886 77765554432 247888899999999999
Q ss_pred EEEccCCC--HHHHHHHHHhcCCceEEecCCCCCCCCcceEEEEecccCCCCCCCccchhhh
Q 021161 165 AKIFRGKD--TSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVCENYFPPEGFNPKDLHRLL 224 (316)
Q Consensus 165 ~Kif~~~~--~~~l~~~l~~~F~~V~~~KP~sSR~~S~E~fvVc~gf~~p~~~~p~~~~~~~ 224 (316)
+|+|.+.. ...++..++..|..|.+.|| +||+.|.|.|+||.+|+...+.+.+..+.++
T Consensus 189 ~kv~~~~~~~~~~~l~~l~~~f~~v~~~kP-~sR~~s~E~y~v~~~~~~~~~~~~t~~~~~~ 249 (305)
T 2p41_A 189 VKVLNPYMSSVIEKMEALQRKHGGALVRNP-LSRNSTHEMYWVSNASGNIVSSVNMISRMLI 249 (305)
T ss_dssp EEESCCCSHHHHHHHHHHHHHHCCEEECCT-TSCTTCCCEEEETTCCCCHHHHHHHHHHHHH
T ss_pred EEeCCCCCchHHHHHHHHHHHcCCEEEecC-CCCCccHHHHHHHhccCCcccchhHHHHHHH
Confidence 99998854 45778888889999999999 9999999999999999876655554433333
No 11
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.95 E-value=1.7e-26 Score=194.30 Aligned_cols=180 Identities=33% Similarity=0.509 Sum_probs=157.1
Q ss_pred CCchhhhhhHHhhhHHcCCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCCCCCcEEEe
Q 021161 20 GWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQ 99 (316)
Q Consensus 20 g~raRsa~KL~qId~~f~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~i~gV~~i~ 99 (316)
|||+|++++|.++.+.+..++++.+|||+|||+|.++..++++++ ++.+|+++|++++..++++++++
T Consensus 1 ~y~~r~~~~l~~~~~~~~~~~~~~~vLd~G~G~G~~~~~l~~~~~------------~~~~v~~~D~~~~~~~~~~~~~~ 68 (180)
T 1ej0_A 1 GLRSRAWFKLDEIQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIG------------GKGRIIACDLLPMDPIVGVDFLQ 68 (180)
T ss_dssp CCSCHHHHHHHHHHHHHCCCCTTCEEEEESCTTCHHHHHHHHHHC------------TTCEEEEEESSCCCCCTTEEEEE
T ss_pred CcchhHHHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHHhC------------CCCeEEEEECccccccCcEEEEE
Confidence 699999999999999999889999999999999999999999874 34799999999976778999999
Q ss_pred cCccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCCCHHHHHHH
Q 021161 100 GDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQ 179 (316)
Q Consensus 100 gDIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~~~~~l~~~ 179 (316)
+|+.+....+.+...+..++||+|++++.....+.+..++.....+...++..+.++|+|||.+++.++.......+...
T Consensus 69 ~d~~~~~~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~ 148 (180)
T 1ej0_A 69 GDFRDELVMKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLRE 148 (180)
T ss_dssp SCTTSHHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTTHHHHHHH
T ss_pred cccccchhhhhhhccCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCcHHHHHHH
Confidence 99999765555555566678999999987776666555555555566788999999999999999999988888888888
Q ss_pred HHhcCCceEEecCCCCCCCCcceEEEEecccC
Q 021161 180 LKLFFPVVTFAKPKSSRNSSIEAFAVCENYFP 211 (316)
Q Consensus 180 l~~~F~~V~~~KP~sSR~~S~E~fvVc~gf~~ 211 (316)
++.+|+.+.+.+|.++|..+.|.|+||++|++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (180)
T 1ej0_A 149 IRSLFTKVKVRKPDSSRARSREVYIVATGRKP 180 (180)
T ss_dssp HHHHEEEEEEECCTTSCTTCCEEEEEEEEECC
T ss_pred HHHhhhhEEeecCCcccccCceEEEEEccCCC
Confidence 88899999999999999999999999999984
No 12
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.94 E-value=1.8e-27 Score=221.84 Aligned_cols=176 Identities=23% Similarity=0.236 Sum_probs=139.4
Q ss_pred hCCchhhhhhHHhhhHHcCCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCC------CCC
Q 021161 19 EGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM------API 92 (316)
Q Consensus 19 ~g~raRsa~KL~qId~~f~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~------~~i 92 (316)
..|++|+++||.+++++ .+++++.+|||||||||+|+++++++ ++|+|||+++| .++
T Consensus 61 ~~~~sR~a~KL~~i~~~-~~~~~g~~VLDlGcGtG~~s~~la~~----------------~~V~gVD~s~m~~~a~~~~~ 123 (276)
T 2wa2_A 61 GHAVSRGTAKLAWIDER-GGVELKGTVVDLGCGRGSWSYYAASQ----------------PNVREVKAYTLGTSGHEKPR 123 (276)
T ss_dssp ----CHHHHHHHHHHHT-TSCCCCEEEEEESCTTCHHHHHHHTS----------------TTEEEEEEECCCCTTSCCCC
T ss_pred CCcCchHHHHHHHHHHc-CCCCCCCEEEEeccCCCHHHHHHHHc----------------CCEEEEECchhhhhhhhchh
Confidence 35899999999999998 77889999999999999999999875 37999999998 344
Q ss_pred C------CcEEE--ecCccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCc--E
Q 021161 93 E------GVIQV--QGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGG--K 162 (316)
Q Consensus 93 ~------gV~~i--~gDIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG--~ 162 (316)
. +|.++ ++|+++. +.++||+|+||++ ..++.+..|+..+ +.+|..+.++||||| .
T Consensus 124 ~~~~~~~~v~~~~~~~D~~~l----------~~~~fD~Vvsd~~-~~~~~~~~d~~~~----l~~L~~~~r~LkpGG~~~ 188 (276)
T 2wa2_A 124 LVETFGWNLITFKSKVDVTKM----------EPFQADTVLCDIG-ESNPTAAVEASRT----LTVLNVISRWLEYNQGCG 188 (276)
T ss_dssp CCCCTTGGGEEEECSCCGGGC----------CCCCCSEEEECCC-CCCSCHHHHHHHH----HHHHHHHHHHHHHSTTCE
T ss_pred hhhhcCCCeEEEeccCcHhhC----------CCCCcCEEEECCC-cCCCchhhhHHHH----HHHHHHHHHHhccCCCcE
Confidence 4 78999 9999873 3578999999987 6666655554432 227788899999999 9
Q ss_pred EEEEEccCCCHH--HHHHHHHhcCCceEEecCCCCCCCCcceEEEEecccCCCCCCCccchhhhhhc
Q 021161 163 FIAKIFRGKDTS--LLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVCENYFPPEGFNPKDLHRLLEKV 227 (316)
Q Consensus 163 fV~Kif~~~~~~--~l~~~l~~~F~~V~~~KP~sSR~~S~E~fvVc~gf~~p~~~~p~~~~~~~~~~ 227 (316)
|++++|...... .++..++..|..+.+. |.+||+.|.|.|+||.++..+.+..++..+-++..+
T Consensus 189 ~v~~~~~~~~~~~~~~l~~l~~~f~~v~v~-P~~sR~~s~E~y~v~~~~~~~~~~~~~~~~~l~~r~ 254 (276)
T 2wa2_A 189 FCVKVLNPYSCDVLEALMKMQARFGGGLIR-VPLSRNSTHEMYFVSGIKNNIMGNVTAVSRQLLKRM 254 (276)
T ss_dssp EEEEESCCCSHHHHHHHHHHHHHHCCEEEC-CTTSCTTCCCEEEESSCCCCHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCchhHHHHHHHHHHHcCCEEEE-cCCCCCcchheEEecccCCCcchhHHHHHHHHHHHh
Confidence 999999844331 5667788889999998 999999999999999988877666655455555543
No 13
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=99.94 E-value=4.4e-27 Score=218.53 Aligned_cols=147 Identities=25% Similarity=0.217 Sum_probs=124.5
Q ss_pred CCCeEEEECC------CCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCCCCCcEEEecCccChhhHHHHHhh
Q 021161 41 GVKRVVDLCA------APGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRH 114 (316)
Q Consensus 41 ~~~rVLDLca------gPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~i~gV~~i~gDIt~~~t~~~I~~~ 114 (316)
-+++|||||| |||+| ++.+..+ .++.||++||+++..+.++ +++||++...
T Consensus 109 ~gmrVLDLGA~s~kg~APGS~--VLr~~~p------------~g~~VVavDL~~~~sda~~-~IqGD~~~~~-------- 165 (344)
T 3r24_A 109 YNMRVIHFGAGSDKGVAPGTA--VLRQWLP------------TGTLLVDSDLNDFVSDADS-TLIGDCATVH-------- 165 (344)
T ss_dssp TTCEEEEESCCCTTSBCHHHH--HHHHHSC------------TTCEEEEEESSCCBCSSSE-EEESCGGGEE--------
T ss_pred CCCEEEeCCCCCCCCCCCcHH--HHHHhCC------------CCcEEEEeeCcccccCCCe-EEEccccccc--------
Confidence 4799999997 99995 6665543 2469999999999877775 5999987643
Q ss_pred cCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCCCHHHHHHHHHhcCCceEEecCCC
Q 021161 115 FDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFFPVVTFAKPKS 194 (316)
Q Consensus 115 ~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~~~~~l~~~l~~~F~~V~~~KP~s 194 (316)
.+.+||+|+||+||+.||..+.+......|++.|+..|.++|+|||+|++|+|.|+....++ .++..|+.|+++| .+
T Consensus 166 -~~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg~~~L~-~lrk~F~~VK~fK-~A 242 (344)
T 3r24_A 166 -TANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNADLY-KLMGHFSWWTAFV-TN 242 (344)
T ss_dssp -ESSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHHH-HHHTTEEEEEEEE-EG
T ss_pred -cCCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCCHHHHH-HHHhhCCeEEEEC-CC
Confidence 24789999999999999997777655667899999999999999999999999999865544 4666999999998 69
Q ss_pred CCCCCcceEEEEecccCCC
Q 021161 195 SRNSSIEAFAVCENYFPPE 213 (316)
Q Consensus 195 SR~~S~E~fvVc~gf~~p~ 213 (316)
||..|+|.|+||+||+++.
T Consensus 243 SRa~SsEvYLVG~gfKg~~ 261 (344)
T 3r24_A 243 VNASSSEAFLIGANYLGKP 261 (344)
T ss_dssp GGTTSSCEEEEEEEECSSC
T ss_pred CCCCCeeEEEEeeeccCCC
Confidence 9999999999999999973
No 14
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=99.93 E-value=4.6e-26 Score=212.02 Aligned_cols=157 Identities=21% Similarity=0.232 Sum_probs=130.8
Q ss_pred CCchhhhhhHHhhhHHcCCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC---CC----
Q 021161 20 GWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---PI---- 92 (316)
Q Consensus 20 g~raRsa~KL~qId~~f~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~---~i---- 92 (316)
+||+|++|||.+|+++| +++++.+|||||||||||||+++...+ ..+|+|+|+.... |+
T Consensus 74 ~y~SR~~~KL~ei~~~~-~l~~~~~VlDLGaapGGwsq~~~~~~g-------------v~~V~avdvG~~~he~P~~~~q 139 (321)
T 3lkz_A 74 HPVSRGTAKLRWLVERR-FLEPVGKVIDLGCGRGGWCYYMATQKR-------------VQEVRGYTKGGPGHEEPQLVQS 139 (321)
T ss_dssp CCSSTHHHHHHHHHHTT-SCCCCEEEEEETCTTCHHHHHHTTCTT-------------EEEEEEECCCSTTSCCCCCCCB
T ss_pred CccchHHHHHHHHHHhc-CCCCCCEEEEeCCCCCcHHHHHHhhcC-------------CCEEEEEEcCCCCccCcchhhh
Confidence 49999999999999996 457888999999999999999887643 2379999999872 21
Q ss_pred ---CCcEEEec-CccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCC-cEEEEEE
Q 021161 93 ---EGVIQVQG-DITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEG-GKFIAKI 167 (316)
Q Consensus 93 ---~gV~~i~g-DIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpG-G~fV~Ki 167 (316)
..|+++++ |+.... ..++|+|+||.+ ..+|....|+... +.+|..+.+.|++| |.|+||+
T Consensus 140 l~w~lV~~~~~~Dv~~l~----------~~~~D~ivcDig-eSs~~~~ve~~Rt----l~vLel~~~wL~~~~~~f~~KV 204 (321)
T 3lkz_A 140 YGWNIVTMKSGVDVFYRP----------SECCDTLLCDIG-ESSSSAEVEEHRT----IRVLEMVEDWLHRGPREFCVKV 204 (321)
T ss_dssp TTGGGEEEECSCCTTSSC----------CCCCSEEEECCC-CCCSCHHHHHHHH----HHHHHHHHHHHTTCCCEEEEEE
T ss_pred cCCcceEEEeccCHhhCC----------CCCCCEEEEECc-cCCCChhhhhhHH----HHHHHHHHHHhccCCCcEEEEE
Confidence 24788888 987643 368999999998 6777766565433 34889999999999 9999999
Q ss_pred ccC--CCHHHHHHHHHhcCCceEEecCCCCCCCCcceEEEE
Q 021161 168 FRG--KDTSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVC 206 (316)
Q Consensus 168 f~~--~~~~~l~~~l~~~F~~V~~~KP~sSR~~S~E~fvVc 206 (316)
|.+ +++.+.+..|+..|..+.+.||. ||+++.|.|+|.
T Consensus 205 l~pY~~~v~e~l~~lq~~fgg~lvr~P~-SRnst~EmY~vs 244 (321)
T 3lkz_A 205 LCPYMPKVIEKMELLQRRYGGGLVRNPL-SRNSTHEMYWVS 244 (321)
T ss_dssp SCTTSHHHHHHHHHHHHHHCCEEECCTT-SCTTCCCEEEET
T ss_pred cCCCChHHHHHHHHHHHHhCCEeEeCCC-CCCCcceEEEEe
Confidence 999 56667788899999999999999 999999999994
No 15
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.84 E-value=3.2e-21 Score=181.05 Aligned_cols=148 Identities=24% Similarity=0.227 Sum_probs=123.2
Q ss_pred CcCCCCeEEEECC------CCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCCCCCcEE-EecCccChhhHHH
Q 021161 38 IFEGVKRVVDLCA------APGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQ-VQGDITNARTAEV 110 (316)
Q Consensus 38 ~~~~~~rVLDLca------gPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~i~gV~~-i~gDIt~~~t~~~ 110 (316)
.++++.+|||||| |||+ ++++++++ ..++|+|+|+++. +++|++ +++|+++..
T Consensus 60 ~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~------------~~~~V~gvDis~~--v~~v~~~i~gD~~~~~---- 119 (290)
T 2xyq_A 60 AVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLP------------TGTLLVDSDLNDF--VSDADSTLIGDCATVH---- 119 (290)
T ss_dssp CCCTTCEEEEESCCCTTSBCHHH--HHHHHHSC------------TTCEEEEEESSCC--BCSSSEEEESCGGGCC----
T ss_pred CCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcC------------CCCEEEEEECCCC--CCCCEEEEECccccCC----
Confidence 4578999999999 8899 77777764 3579999999998 789999 999998753
Q ss_pred HHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCCCHHHHHHHHHhc-CCceEE
Q 021161 111 VIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLF-FPVVTF 189 (316)
Q Consensus 111 I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~~~~~l~~~l~~~-F~~V~~ 189 (316)
+. ++||+|+||+++..+|.++.++..+..++..++..+.++|||||+|++++|++.+...+...++.+ |..|.+
T Consensus 120 ----~~-~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~~~~l~~~l~~~GF~~v~~ 194 (290)
T 2xyq_A 120 ----TA-NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNADLYKLMGHFSWWTAFV 194 (290)
T ss_dssp ----CS-SCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHHHHHHTTEEEEEEEE
T ss_pred ----cc-CcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCCHHHHHHHHHHcCCcEEEE
Confidence 22 579999999988888877766544445667889999999999999999999988888899999988 988888
Q ss_pred ecCCCCCCCCcceEEEEecccCCC
Q 021161 190 AKPKSSRNSSIEAFAVCENYFPPE 213 (316)
Q Consensus 190 ~KP~sSR~~S~E~fvVc~gf~~p~ 213 (316)
. +||..|.|.|++|++|+.+.
T Consensus 195 ~---asr~~s~e~~lv~~~~~~~~ 215 (290)
T 2xyq_A 195 T---NVNASSSEAFLIGANYLGKP 215 (290)
T ss_dssp E---GGGTTSSCEEEEEEEECSSC
T ss_pred E---EcCCCchheEEecCCccCCC
Confidence 7 78999999999999999763
No 16
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=99.72 E-value=9.4e-18 Score=154.83 Aligned_cols=111 Identities=15% Similarity=0.097 Sum_probs=100.1
Q ss_pred CCCCCcEEE-ecCccChhhHHHHHhhcCCccccEEEeCCCCCCCCCC-C--ccHHHHHHHHHHHHHHHHHcccCCcEEEE
Q 021161 90 APIEGVIQV-QGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLH-D--MDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (316)
Q Consensus 90 ~~i~gV~~i-~gDIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~-~--~de~~~~~L~~aaL~~a~~vLkpGG~fV~ 165 (316)
.|++|++++ ++|++.+.+. +++|+|+||++|+.+|+| . .|+.+..+| ++..|..+|+|||+||+
T Consensus 185 ~Pi~GAt~~~~lDfg~p~~~---------~k~DvV~SDMApn~sGh~yqQC~DHarii~L---al~fA~~vLkPGGtfV~ 252 (320)
T 2hwk_A 185 SDRPEATFRARLDLGIPGDV---------PKYDIIFVNVRTPYKYHHYQQCEDHAIKLSM---LTKKACLHLNPGGTCVS 252 (320)
T ss_dssp ESSTTCSEECCGGGCSCTTS---------CCEEEEEEECCCCCCSCHHHHHHHHHHHHHH---THHHHGGGEEEEEEEEE
T ss_pred ccCCCceeecccccCCcccc---------CcCCEEEEcCCCCCCCccccccchHHHHHHH---HHHHHHHhcCCCceEEE
Confidence 468899998 8999997642 579999999999999999 7 788777777 78999999999999999
Q ss_pred EEccCC--CHHHHHHHHHhcCCceEEecCCCCCCCCcceEEEEecccCCC
Q 021161 166 KIFRGK--DTSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVCENYFPPE 213 (316)
Q Consensus 166 Kif~~~--~~~~l~~~l~~~F~~V~~~KP~sSR~~S~E~fvVc~gf~~p~ 213 (316)
|+|.+. ....+...|++.|+.|+.+||.+||. |+|.|+|++||++..
T Consensus 253 KvyggaDr~se~lv~~LaR~F~~Vr~vKP~ASR~-StEvf~La~gf~g~~ 301 (320)
T 2hwk_A 253 IGYGYADRASESIIGAIARQFKFSRVCKPKSSLE-ETEVLFVFIGYDRKA 301 (320)
T ss_dssp EECCCCSHHHHHHHHHHHTTEEEEEEECCTTCCS-TTCEEEEEEEECCCC
T ss_pred EEecCCcccHHHHHHHHHHhcceeeeeCCCCccc-cceEEEEEEeecCCc
Confidence 999998 57889999999999999999999999 999999999999844
No 17
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=99.70 E-value=3.8e-17 Score=157.54 Aligned_cols=95 Identities=25% Similarity=0.275 Sum_probs=78.9
Q ss_pred HHHHHhCCchhhhhhHHhhhHHcC-------CcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeC
Q 021161 14 RKAKEEGWRARSAFKLLQIDEEFN-------IFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDL 86 (316)
Q Consensus 14 r~ak~~g~raRsa~KL~qId~~f~-------~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl 86 (316)
|+....+.-+||+|||.|+...|. ++++|++||||||+|||||+++.++. ++|+|||+
T Consensus 177 rl~~~~~~pSRa~lKL~Ea~~~F~~~~~~~~~l~~G~~vlDLGAaPGGWT~~l~~rg---------------~~V~aVD~ 241 (375)
T 4auk_A 177 RLKFPADAPSRSTLKLEEAFHVFIPADEWDERLANGMWAVDLGACPGGWTYQLVKRN---------------MWVYSVDN 241 (375)
T ss_dssp CCCCCTTSSCTTHHHHHHHHHHHSCGGGHHHHSCTTCEEEEETCTTCHHHHHHHHTT---------------CEEEEECS
T ss_pred cccCCCCCCCHHHHHHHHHHHhccchhhhhccCCCCCEEEEeCcCCCHHHHHHHHCC---------------CEEEEEEh
Confidence 444445677999999999887773 57899999999999999999998863 69999999
Q ss_pred CCCCC----CCCcEEEecCccChhhHHHHHhhcCCccccEEEeCCCCCC
Q 021161 87 QPMAP----IEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDV 131 (316)
Q Consensus 87 ~~~~~----i~gV~~i~gDIt~~~t~~~I~~~~~~~~~DlVvsDgapdv 131 (316)
.+|.+ .++|+++++|+.... ....++|+|+||+++..
T Consensus 242 ~~l~~~l~~~~~V~~~~~d~~~~~--------~~~~~~D~vvsDm~~~p 282 (375)
T 4auk_A 242 GPMAQSLMDTGQVTWLREDGFKFR--------PTRSNISWMVCDMVEKP 282 (375)
T ss_dssp SCCCHHHHTTTCEEEECSCTTTCC--------CCSSCEEEEEECCSSCH
T ss_pred hhcChhhccCCCeEEEeCcccccc--------CCCCCcCEEEEcCCCCh
Confidence 99975 589999999988753 34468999999998753
No 18
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.49 E-value=8.7e-14 Score=126.45 Aligned_cols=117 Identities=17% Similarity=0.137 Sum_probs=87.9
Q ss_pred CCchhhhhhHHhhhHHcCCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC---------
Q 021161 20 GWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------- 90 (316)
Q Consensus 20 g~raRsa~KL~qId~~f~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~--------- 90 (316)
-||++.+-+|++..+.+. ++++.+|||||||||+|+.++++.++ +.++|+|+|+++.+
T Consensus 56 ~~~skla~~ll~~l~~~~-l~~g~~VLDlG~GtG~~t~~la~~v~------------~~G~V~avD~s~~~l~~l~~~a~ 122 (232)
T 3id6_C 56 AFRSKLAGAILKGLKTNP-IRKGTKVLYLGAASGTTISHVSDIIE------------LNGKAYGVEFSPRVVRELLLVAQ 122 (232)
T ss_dssp TTTCHHHHHHHTTCSCCS-CCTTCEEEEETCTTSHHHHHHHHHHT------------TTSEEEEEECCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhhhhhcC-CCCCCEEEEEeecCCHHHHHHHHHhC------------CCCEEEEEECcHHHHHHHHHHhh
Confidence 367888888888766555 47889999999999999999999985 46899999999832
Q ss_pred CCCCcEEEecCccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEE
Q 021161 91 PIEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (316)
Q Consensus 91 ~i~gV~~i~gDIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Ki 167 (316)
...+|.++++|++.+... ..+ .++||+|++|++. .+ +. ...+..+.++|||||.|++.+
T Consensus 123 ~r~nv~~i~~Da~~~~~~----~~~-~~~~D~I~~d~a~-------~~---~~---~il~~~~~~~LkpGG~lvisi 181 (232)
T 3id6_C 123 RRPNIFPLLADARFPQSY----KSV-VENVDVLYVDIAQ-------PD---QT---DIAIYNAKFFLKVNGDMLLVI 181 (232)
T ss_dssp HCTTEEEEECCTTCGGGT----TTT-CCCEEEEEECCCC-------TT---HH---HHHHHHHHHHEEEEEEEEEEE
T ss_pred hcCCeEEEEcccccchhh----hcc-ccceEEEEecCCC-------hh---HH---HHHHHHHHHhCCCCeEEEEEE
Confidence 236899999999976421 112 3589999999764 11 11 122345566999999999875
No 19
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.47 E-value=2.1e-13 Score=124.02 Aligned_cols=152 Identities=18% Similarity=0.228 Sum_probs=101.1
Q ss_pred cC-CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCC-CcEEEecCccCh
Q 021161 39 FE-GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITNA 105 (316)
Q Consensus 39 ~~-~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~-gV~~i~gDIt~~ 105 (316)
++ ++.+|||+|||+|.++..++++.. .+|+|||+++.+ .+. +++++++|+.+.
T Consensus 46 ~~~~~~~vLDlG~G~G~~~~~la~~~~--------------~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~ 111 (259)
T 3lpm_A 46 LPIRKGKIIDLCSGNGIIPLLLSTRTK--------------AKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKI 111 (259)
T ss_dssp CCSSCCEEEETTCTTTHHHHHHHTTCC--------------CEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGG
T ss_pred CCCCCCEEEEcCCchhHHHHHHHHhcC--------------CcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHh
Confidence 45 789999999999999999988642 499999999842 233 589999999875
Q ss_pred hhHHHHHhhcCCccccEEEeCCCCCCC---CCCCccHHHH------HHHHHHHHHHHHHcccCCcEEEEEEccCCCHHHH
Q 021161 106 RTAEVVIRHFDGCKADLVVCDGAPDVT---GLHDMDEFVQ------SQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLL 176 (316)
Q Consensus 106 ~t~~~I~~~~~~~~~DlVvsDgapdvt---G~~~~de~~~------~~L~~aaL~~a~~vLkpGG~fV~Kif~~~~~~~l 176 (316)
. ..+..++||+|+||.+.... +..+.+.... ...+...+..+.++|||||.|++ +++......+
T Consensus 112 ~------~~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~-~~~~~~~~~~ 184 (259)
T 3lpm_A 112 T------DLIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANF-VHRPERLLDI 184 (259)
T ss_dssp G------GTSCTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEE-EECTTTHHHH
T ss_pred h------hhhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEE-EEcHHHHHHH
Confidence 3 12446789999999754222 3322221111 12235678899999999999999 6777788888
Q ss_pred HHHHHhcCCceEEecCCCCCCCCcceEEEEecccC
Q 021161 177 YCQLKLFFPVVTFAKPKSSRNSSIEAFAVCENYFP 211 (316)
Q Consensus 177 ~~~l~~~F~~V~~~KP~sSR~~S~E~fvVc~gf~~ 211 (316)
...++...-.+...++..++......+++....+.
T Consensus 185 ~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~~~k~ 219 (259)
T 3lpm_A 185 IDIMRKYRLEPKRIQFVHPRSDREANTVLVEGIKD 219 (259)
T ss_dssp HHHHHHTTEEEEEEEEEESSTTSCCSEEEEEEEET
T ss_pred HHHHHHCCCceEEEEEeecCCCCCcEEEEEEEEeC
Confidence 88787653233333344444445555666666664
No 20
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.46 E-value=5.1e-13 Score=122.19 Aligned_cols=156 Identities=12% Similarity=0.083 Sum_probs=100.8
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC--------------CCC-CcEEEecCcc
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------------PIE-GVIQVQGDIT 103 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~--------------~i~-gV~~i~gDIt 103 (316)
..++.+|||||||+|.++..++++.+ ..+|+|||+++.+ .+. +++++++|+.
T Consensus 34 ~~~~~~VLDlG~G~G~~~l~la~~~~-------------~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~ 100 (260)
T 2ozv_A 34 DDRACRIADLGAGAGAAGMAVAARLE-------------KAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVT 100 (260)
T ss_dssp CCSCEEEEECCSSSSHHHHHHHHHCT-------------TEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTT
T ss_pred ccCCCEEEEeCChHhHHHHHHHHhCC-------------CCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHH
Confidence 45678999999999999999999863 4799999999841 122 3889999999
Q ss_pred ChhhHHHHHhhcCCccccEEEeCCCCCCC-CCCCccHHHHHH------HHHHHHHHHHHcccCCcEEEEEEccCCCHHHH
Q 021161 104 NARTAEVVIRHFDGCKADLVVCDGAPDVT-GLHDMDEFVQSQ------LILAGLTVVTHVLKEGGKFIAKIFRGKDTSLL 176 (316)
Q Consensus 104 ~~~t~~~I~~~~~~~~~DlVvsDgapdvt-G~~~~de~~~~~------L~~aaL~~a~~vLkpGG~fV~Kif~~~~~~~l 176 (316)
+... ..+...+..++||+|+||.+.... +..+.++..... .+...+..+.++|||||.|++ +++......+
T Consensus 101 ~~~~-~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~-~~~~~~~~~~ 178 (260)
T 2ozv_A 101 LRAK-ARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSL-ISRPQSVAEI 178 (260)
T ss_dssp CCHH-HHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEE-EECGGGHHHH
T ss_pred HHhh-hhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEE-EEcHHHHHHH
Confidence 8621 111123456789999999643222 211122111111 135668889999999999998 6666677778
Q ss_pred HHHHHhcCCceEEecCCCCCCCCcceEEEEecc
Q 021161 177 YCQLKLFFPVVTFAKPKSSRNSSIEAFAVCENY 209 (316)
Q Consensus 177 ~~~l~~~F~~V~~~KP~sSR~~S~E~fvVc~gf 209 (316)
...++..|..+.+....+........++|.-..
T Consensus 179 ~~~l~~~~~~~~i~~v~~~~~~~~~~~lv~~~k 211 (260)
T 2ozv_A 179 IAACGSRFGGLEITLIHPRPGEDAVRMLVTAIK 211 (260)
T ss_dssp HHHHTTTEEEEEEEEEESSTTSCCCEEEEEEEE
T ss_pred HHHHHhcCCceEEEEEcCCCCCCceEEEEEEEe
Confidence 888877676666554444444445556665444
No 21
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.43 E-value=6.8e-13 Score=124.41 Aligned_cols=159 Identities=19% Similarity=0.233 Sum_probs=108.2
Q ss_pred HHhCCchhhhhhHHhhhHHcCCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-C----
Q 021161 17 KEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-P---- 91 (316)
Q Consensus 17 k~~g~raRsa~KL~qId~~f~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-~---- 91 (316)
+...|.+|.++||.++.+.|.+-.++.+|||+|||||+|+..++++. ..+|+|||+++-+ .
T Consensus 61 ~~~~yvsrg~~Kl~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~g--------------a~~V~aVDvs~~mL~~a~r 126 (291)
T 3hp7_A 61 EKLRYVSRGGLKLEKALAVFNLSVEDMITIDIGASTGGFTDVMLQNG--------------AKLVYAVDVGTNQLVWKLR 126 (291)
T ss_dssp CCCCSSSTTHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTT--------------CSEEEEECSSSSCSCHHHH
T ss_pred cccccccchHHHHHHHHHhcCCCccccEEEecCCCccHHHHHHHhCC--------------CCEEEEEECCHHHHHHHHH
Confidence 33579999999999999999987788999999999999999998862 3699999999843 1
Q ss_pred -CCCcEEE-ecCccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEE--
Q 021161 92 -IEGVIQV-QGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI-- 167 (316)
Q Consensus 92 -i~gV~~i-~gDIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Ki-- 167 (316)
.+.+... ..|+..... +.++..+||+|+||.++ +++ ..+|..+.++|||||.|++-+
T Consensus 127 ~~~rv~~~~~~ni~~l~~-----~~l~~~~fD~v~~d~sf-----~sl---------~~vL~e~~rvLkpGG~lv~lvkP 187 (291)
T 3hp7_A 127 QDDRVRSMEQYNFRYAEP-----VDFTEGLPSFASIDVSF-----ISL---------NLILPALAKILVDGGQVVALVKP 187 (291)
T ss_dssp TCTTEEEECSCCGGGCCG-----GGCTTCCCSEEEECCSS-----SCG---------GGTHHHHHHHSCTTCEEEEEECG
T ss_pred hCcccceecccCceecch-----hhCCCCCCCEEEEEeeH-----hhH---------HHHHHHHHHHcCcCCEEEEEECc
Confidence 2455443 346654321 12444469999999764 222 245788899999999999852
Q ss_pred -ccCC-----------C-------HHHHHHHHHhc-CCceEE-ecCCCCCCCCcceEEEEec
Q 021161 168 -FRGK-----------D-------TSLLYCQLKLF-FPVVTF-AKPKSSRNSSIEAFAVCEN 208 (316)
Q Consensus 168 -f~~~-----------~-------~~~l~~~l~~~-F~~V~~-~KP~sSR~~S~E~fvVc~g 208 (316)
|... + ...+...+... |.-..+ .-|......|.|-++.++.
T Consensus 188 qfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~~~~spi~g~~gn~e~l~~~~~ 249 (291)
T 3hp7_A 188 QFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKGLDFSPIQGGHGNIEFLAHLEK 249 (291)
T ss_dssp GGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEEEEECSSCCGGGCCCEEEEEEE
T ss_pred ccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCcCHHHHHHhhh
Confidence 4311 1 11233333322 543333 3466666778887766654
No 22
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.35 E-value=3.7e-12 Score=119.98 Aligned_cols=123 Identities=19% Similarity=0.190 Sum_probs=89.8
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCCcEEEecCccChhhH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~gV~~i~gDIt~~~t~ 108 (316)
+++.+|||+|||||+++..+++.+. ..++|+|+|+++.+ .+.+++++++|+++...
T Consensus 117 ~~g~~VLDlg~G~G~~t~~la~~~~------------~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~- 183 (315)
T 1ixk_A 117 KPGEIVADMAAAPGGKTSYLAQLMR------------NDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGE- 183 (315)
T ss_dssp CTTCEEEECCSSCSHHHHHHHHHTT------------TCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGG-
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhC------------CCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhccc-
Confidence 5788999999999999999999874 34799999999842 24578999999987531
Q ss_pred HHHHhhcCCccccEEEeCCCCCCCCCCCccH-----------HHHHHHHHHHHHHHHHcccCCcEEEEEEcc---CCCHH
Q 021161 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDE-----------FVQSQLILAGLTVVTHVLKEGGKFIAKIFR---GKDTS 174 (316)
Q Consensus 109 ~~I~~~~~~~~~DlVvsDgapdvtG~~~~de-----------~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~---~~~~~ 174 (316)
+ .++||+|++|..+...|....+. ....+++...|..+.++|||||.||+.++. .++..
T Consensus 184 ------~-~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~ 256 (315)
T 1ixk_A 184 ------L-NVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENEF 256 (315)
T ss_dssp ------G-CCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGTHH
T ss_pred ------c-cccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHhHH
Confidence 2 35799999997655555321111 112345577889999999999999987654 24555
Q ss_pred HHHHHHHh
Q 021161 175 LLYCQLKL 182 (316)
Q Consensus 175 ~l~~~l~~ 182 (316)
.+...++.
T Consensus 257 ~v~~~l~~ 264 (315)
T 1ixk_A 257 VIQWALDN 264 (315)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 55566665
No 23
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.34 E-value=2.2e-12 Score=127.90 Aligned_cols=125 Identities=21% Similarity=0.278 Sum_probs=93.3
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCCcEEEecCccChhhH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~gV~~i~gDIt~~~t~ 108 (316)
+++.+|||||||||++|..++++++ ..++|+|+|+++.+ .+.+|.++++|..+..
T Consensus 104 ~~g~~VLDlcaGpGgkt~~lA~~~~------------~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~-- 169 (456)
T 3m4x_A 104 KPGEKVLDLCAAPGGKSTQLAAQMK------------GKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELV-- 169 (456)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHT------------TCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHH--
T ss_pred CCCCEEEEECCCcCHHHHHHHHHcC------------CCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhh--
Confidence 6789999999999999999999885 34799999999842 2567888899987642
Q ss_pred HHHHhhcCCccccEEEeCCCCCCCCCCCccHH-----------HHHHHHHHHHHHHHHcccCCcEEEEEEcc---CCCHH
Q 021161 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEF-----------VQSQLILAGLTVVTHVLKEGGKFIAKIFR---GKDTS 174 (316)
Q Consensus 109 ~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~-----------~~~~L~~aaL~~a~~vLkpGG~fV~Kif~---~~~~~ 174 (316)
..+ .++||+|++|.++..+|....+.. ...+++...|..+.++|||||.||..+.. .++..
T Consensus 170 ----~~~-~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~eEne~ 244 (456)
T 3m4x_A 170 ----PHF-SGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAPEENEE 244 (456)
T ss_dssp ----HHH-TTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCGGGTHH
T ss_pred ----hhc-cccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecccccCHH
Confidence 122 368999999987666665332221 12445678899999999999999986654 34566
Q ss_pred HHHHHHHhc
Q 021161 175 LLYCQLKLF 183 (316)
Q Consensus 175 ~l~~~l~~~ 183 (316)
.+.+.++.+
T Consensus 245 vv~~~l~~~ 253 (456)
T 3m4x_A 245 IISWLVENY 253 (456)
T ss_dssp HHHHHHHHS
T ss_pred HHHHHHHhC
Confidence 666777664
No 24
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.34 E-value=3.7e-12 Score=126.93 Aligned_cols=124 Identities=18% Similarity=0.181 Sum_probs=91.8
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCCcEEEecCccChhhHH
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTAE 109 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~gV~~i~gDIt~~~t~~ 109 (316)
++.+|||+|||||+++..++++++ ..++|+|+|+++.+ .+.+|.++++|+++...
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~------------~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~-- 182 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMN------------NEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGA-- 182 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTT------------TCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHH--
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCC------------CCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhh--
Confidence 789999999999999999999884 35799999999842 25678999999987531
Q ss_pred HHHhhcCCccccEEEeCCCCCCCCCC--C------ccH---HHHHHHHHHHHHHHHHcccCCcEEEEEEcc---CCCHHH
Q 021161 110 VVIRHFDGCKADLVVCDGAPDVTGLH--D------MDE---FVQSQLILAGLTVVTHVLKEGGKFIAKIFR---GKDTSL 175 (316)
Q Consensus 110 ~I~~~~~~~~~DlVvsDgapdvtG~~--~------~de---~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~---~~~~~~ 175 (316)
.+ .++||+|++|+++...|.. + +.. ....+++...|..+.++|||||.||+.++. .++...
T Consensus 183 ----~~-~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~~Ene~v 257 (479)
T 2frx_A 183 ----AV-PEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQEENEAV 257 (479)
T ss_dssp ----HS-TTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCSSTTTHHH
T ss_pred ----hc-cccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCCcccCHHH
Confidence 12 3589999999765544431 1 111 122445677899999999999999987654 345555
Q ss_pred HHHHHHhc
Q 021161 176 LYCQLKLF 183 (316)
Q Consensus 176 l~~~l~~~ 183 (316)
+.+.++.+
T Consensus 258 v~~~l~~~ 265 (479)
T 2frx_A 258 CLWLKETY 265 (479)
T ss_dssp HHHHHHHS
T ss_pred HHHHHHHC
Confidence 66667765
No 25
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.33 E-value=1.9e-12 Score=128.64 Aligned_cols=124 Identities=20% Similarity=0.220 Sum_probs=91.6
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCCcEEEecCccChhhH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~gV~~i~gDIt~~~t~ 108 (316)
+++.+|||||||||+++..++++++ ..++|+|+|+++.+ .+. |.++++|+++..
T Consensus 100 ~~g~~VLDlgaGpG~kt~~LA~~~~------------~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~~~Da~~l~-- 164 (464)
T 3m6w_A 100 KPGERVLDLAAAPGGKTTHLAARMG------------GKGLLLANEVDGKRVRGLLENVERWGAP-LAVTQAPPRALA-- 164 (464)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTT------------TCSEEEEECSCHHHHHHHHHHHHHHCCC-CEEECSCHHHHH--
T ss_pred CCCCEEEEEcCCcCHHHHHHHHhCC------------CCCEEEEEECCHHHHHHHHHHHHHcCCe-EEEEECCHHHhh--
Confidence 5789999999999999999999985 34799999999842 245 888899987643
Q ss_pred HHHHhhcCCccccEEEeCCCCCCCCCCCcc-----------HHHHHHHHHHHHHHHHHcccCCcEEEEEEcc---CCCHH
Q 021161 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMD-----------EFVQSQLILAGLTVVTHVLKEGGKFIAKIFR---GKDTS 174 (316)
Q Consensus 109 ~~I~~~~~~~~~DlVvsDgapdvtG~~~~d-----------e~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~---~~~~~ 174 (316)
..+ .++||+|++|.++..+|....+ -....+++...|..+.++|||||.||..++. .++..
T Consensus 165 ----~~~-~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~eEne~ 239 (464)
T 3m6w_A 165 ----EAF-GTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAPEENEG 239 (464)
T ss_dssp ----HHH-CSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHH
T ss_pred ----hhc-cccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCchhcCHH
Confidence 112 3689999999876555542111 1123456678899999999999999986654 34566
Q ss_pred HHHHHHHhc
Q 021161 175 LLYCQLKLF 183 (316)
Q Consensus 175 ~l~~~l~~~ 183 (316)
.+.+.++.+
T Consensus 240 vv~~~l~~~ 248 (464)
T 3m6w_A 240 VVAHFLKAH 248 (464)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHHC
Confidence 666777765
No 26
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.31 E-value=6.2e-12 Score=107.63 Aligned_cols=109 Identities=17% Similarity=0.183 Sum_probs=74.3
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCCcEEEecCccChhh
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNART 107 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~gV~~i~gDIt~~~t 107 (316)
++++.+|||+|||+|.++..++++ . .+|+|+|+++.+ .+.+++++++|+.+..
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~la~~-~--------------~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~- 83 (185)
T 3mti_A 20 LDDESIVVDATMGNGNDTAFLAGL-S--------------KKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLD- 83 (185)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTT-S--------------SEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGG-
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHh-C--------------CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHH-
Confidence 568899999999999999999875 2 699999999842 2467899998877642
Q ss_pred HHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCC
Q 021161 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK 171 (316)
Q Consensus 108 ~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~ 171 (316)
.+..++||+|+++...-..+.+.... .......++..+.++|||||.|++.+|.+.
T Consensus 84 ------~~~~~~fD~v~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 139 (185)
T 3mti_A 84 ------HYVREPIRAAIFNLGYLPSADKSVIT--KPHTTLEAIEKILDRLEVGGRLAIMIYYGH 139 (185)
T ss_dssp ------GTCCSCEEEEEEEEC-------------CHHHHHHHHHHHHHHEEEEEEEEEEEC---
T ss_pred ------hhccCCcCEEEEeCCCCCCcchhccc--ChhhHHHHHHHHHHhcCCCcEEEEEEeCCC
Confidence 12357899999983211111111100 112234678889999999999999888653
No 27
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.28 E-value=7.2e-12 Score=115.35 Aligned_cols=128 Identities=16% Similarity=0.202 Sum_probs=85.9
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCCcEEEecCccChhhH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~gV~~i~gDIt~~~t~ 108 (316)
+++.+|||+|||||+++..+++.+. ..++|+|+|+++.+ .+.+++++++|+++....
T Consensus 82 ~~g~~VLDlgaG~G~~t~~la~~~~------------~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~ 149 (274)
T 3ajd_A 82 REDDFILDMCAAPGGKTTHLAQLMK------------NKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDY 149 (274)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTT------------TCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHH
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcC------------CCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchh
Confidence 5788999999999999999999874 24799999999842 245789999998764310
Q ss_pred HHHHhhcCCccccEEEeCCCCCCCCCCCccH----HH---HHHHHHHHHHHHHHcccCCcEEEEEEcc---CCCHHHHHH
Q 021161 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDE----FV---QSQLILAGLTVVTHVLKEGGKFIAKIFR---GKDTSLLYC 178 (316)
Q Consensus 109 ~~I~~~~~~~~~DlVvsDgapdvtG~~~~de----~~---~~~L~~aaL~~a~~vLkpGG~fV~Kif~---~~~~~~l~~ 178 (316)
+. ...++||+|++|.++...|....+. .. ...++...|..+.++|||||.|++.+.. .++...+.+
T Consensus 150 --~~--~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~ene~~v~~ 225 (274)
T 3ajd_A 150 --LL--KNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVEENEEVIKY 225 (274)
T ss_dssp --HH--HTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTTSSHHHHHH
T ss_pred --hh--hccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCChHHhHHHHHH
Confidence 00 0246899999997654444321110 00 0123456788899999999999987654 345555666
Q ss_pred HHHhc
Q 021161 179 QLKLF 183 (316)
Q Consensus 179 ~l~~~ 183 (316)
.++.+
T Consensus 226 ~l~~~ 230 (274)
T 3ajd_A 226 ILQKR 230 (274)
T ss_dssp HHHHC
T ss_pred HHHhC
Confidence 66654
No 28
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.27 E-value=1e-11 Score=107.46 Aligned_cols=159 Identities=13% Similarity=-0.062 Sum_probs=95.2
Q ss_pred hhhHHcCCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-C-----C--C--CcEEEec
Q 021161 31 QIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-P-----I--E--GVIQVQG 100 (316)
Q Consensus 31 qId~~f~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-~-----i--~--gV~~i~g 100 (316)
.+.+.+....++.+|||+|||+|.++..++++.. ..+|+|+|+++.+ . + . +++++++
T Consensus 20 ~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~-------------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~ 86 (215)
T 4dzr_A 20 EAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACP-------------GVSVTAVDLSMDALAVARRNAERFGAVVDWAAA 86 (215)
T ss_dssp HHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCT-------------TEEEEEEECC-------------------CCHH
T ss_pred HHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCC-------------CCeEEEEECCHHHHHHHHHHHHHhCCceEEEEc
Confidence 3444444446789999999999999999998863 4699999999842 1 1 1 4667777
Q ss_pred CccChhhHHHHHhhcCCccccEEEeCCCCCCCCC-CCccHHHH--------------HHHHHHHHHHHHHcccCCcEEEE
Q 021161 101 DITNARTAEVVIRHFDGCKADLVVCDGAPDVTGL-HDMDEFVQ--------------SQLILAGLTVVTHVLKEGGKFIA 165 (316)
Q Consensus 101 DIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~-~~~de~~~--------------~~L~~aaL~~a~~vLkpGG~fV~ 165 (316)
|+.+.. ... ....++||+|+||.+....+. +....... .......+..+.++|||||.|++
T Consensus 87 d~~~~~--~~~--~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 162 (215)
T 4dzr_A 87 DGIEWL--IER--AERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVF 162 (215)
T ss_dssp HHHHHH--HHH--HHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEE
T ss_pred chHhhh--hhh--hhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 876621 110 012368999999965322211 11110000 11125667888899999999444
Q ss_pred EEccCCCHHHHHHHHH---hcCCceEEecCCCCCCCCcceEEEEeccc
Q 021161 166 KIFRGKDTSLLYCQLK---LFFPVVTFAKPKSSRNSSIEAFAVCENYF 210 (316)
Q Consensus 166 Kif~~~~~~~l~~~l~---~~F~~V~~~KP~sSR~~S~E~fvVc~gf~ 210 (316)
-.+.......+...++ .-|..+.+.+....+ +++++++...
T Consensus 163 ~~~~~~~~~~~~~~l~~~~~gf~~~~~~~~~~~~----~r~~~~~~~~ 206 (215)
T 4dzr_A 163 LEVGHNQADEVARLFAPWRERGFRVRKVKDLRGI----DRVIAVTREP 206 (215)
T ss_dssp EECTTSCHHHHHHHTGGGGGGTEECCEEECTTSC----EEEEEEEECC
T ss_pred EEECCccHHHHHHHHHHhhcCCceEEEEEecCCC----EEEEEEEEcC
Confidence 3555555666666655 448788777765544 6788876543
No 29
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.27 E-value=8.7e-12 Score=122.94 Aligned_cols=126 Identities=24% Similarity=0.206 Sum_probs=92.5
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCCcEEEecCccChhhH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~gV~~i~gDIt~~~t~ 108 (316)
+++.+|||+|||||+++..+++.++ ..++|+|+|+++.+ .+.+|.++++|+++..
T Consensus 258 ~~g~~VLDlgaG~G~~t~~la~~~~------------~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~-- 323 (450)
T 2yxl_A 258 KPGETVVDLAAAPGGKTTHLAELMK------------NKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAP-- 323 (450)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTT------------TCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCS--
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcC------------CCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcc--
Confidence 5788999999999999999999874 23799999999842 3567899999998753
Q ss_pred HHHHhhcCCccccEEEeCCCCCCCCCCC--c---------cHHHHHHHHHHHHHHHHHcccCCcEEEEEEccC---CCHH
Q 021161 109 EVVIRHFDGCKADLVVCDGAPDVTGLHD--M---------DEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG---KDTS 174 (316)
Q Consensus 109 ~~I~~~~~~~~~DlVvsDgapdvtG~~~--~---------de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~---~~~~ 174 (316)
..+.+++||+|++|.++..+|... . +......++...|..+.++|||||.||+.++.- ++..
T Consensus 324 ----~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~ene~ 399 (450)
T 2yxl_A 324 ----EIIGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKEENEK 399 (450)
T ss_dssp ----SSSCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHH
T ss_pred ----hhhccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCChhhHHH
Confidence 124446899999998765555421 1 112234455677899999999999999876543 3555
Q ss_pred HHHHHHHhc
Q 021161 175 LLYCQLKLF 183 (316)
Q Consensus 175 ~l~~~l~~~ 183 (316)
.+...++.+
T Consensus 400 ~v~~~l~~~ 408 (450)
T 2yxl_A 400 NIRWFLNVH 408 (450)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhC
Confidence 666667764
No 30
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.27 E-value=3.4e-11 Score=109.43 Aligned_cols=99 Identities=16% Similarity=0.173 Sum_probs=78.6
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCC---------CCCCCcEEEecCccChhhHH
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM---------APIEGVIQVQGDITNARTAE 109 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~---------~~i~gV~~i~gDIt~~~t~~ 109 (316)
+++|.+|||||||+|.++..+++.++ +.++|+|||+++. ....|+..+.+|..++...
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG------------~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~- 141 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIG------------PRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKY- 141 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC------------TTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGG-
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhC------------CCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCcccc-
Confidence 58999999999999999999999986 5789999999983 1357899999999886532
Q ss_pred HHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEE
Q 021161 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (316)
Q Consensus 110 ~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Ki 167 (316)
.+...++|+|++|.+- + +. ...++..+.++|||||.|++.+
T Consensus 142 ----~~~~~~vDvVf~d~~~-----~--~~------~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 142 ----RHLVEGVDGLYADVAQ-----P--EQ------AAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp ----TTTCCCEEEEEECCCC-----T--TH------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred ----ccccceEEEEEEeccC-----C--hh------HHHHHHHHHHhccCCCEEEEEE
Confidence 1234689999998531 1 11 1356788899999999999864
No 31
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.27 E-value=4e-11 Score=109.89 Aligned_cols=143 Identities=17% Similarity=0.126 Sum_probs=98.4
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCCcEEEecCccChhhH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~gV~~i~gDIt~~~t~ 108 (316)
.++.+|||+|||+|.++..+++..+ ..+|+|+|+++.+ .+++++++++|+.+.
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~~-------------~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~--- 171 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASERP-------------DCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSA--- 171 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHCT-------------TSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGG---
T ss_pred cCCCEEEEecCCccHHHHHHHHhCC-------------CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhh---
Confidence 4678999999999999999998763 4799999999842 245799999999863
Q ss_pred HHHHhhcCCccccEEEeCCCCCCCCC---------CCccH-----HHHHHHHHHHHHHHHHcccCCcEEEEEEccCCCHH
Q 021161 109 EVVIRHFDGCKADLVVCDGAPDVTGL---------HDMDE-----FVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTS 174 (316)
Q Consensus 109 ~~I~~~~~~~~~DlVvsDgapdvtG~---------~~~de-----~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~~~~ 174 (316)
+..++||+|+|+.+.-..+. +.... .-........+..+.++|+|||.+++.+ ......
T Consensus 172 ------~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~-~~~~~~ 244 (276)
T 2b3t_A 172 ------LAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEH-GWQQGE 244 (276)
T ss_dssp ------GTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEEC-CSSCHH
T ss_pred ------cccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEE-CchHHH
Confidence 22468999999954211110 00000 0001234567888999999999999854 334455
Q ss_pred HHHHHHHhc-CCceEEecCCCCCCCCcceEEEEecc
Q 021161 175 LLYCQLKLF-FPVVTFAKPKSSRNSSIEAFAVCENY 209 (316)
Q Consensus 175 ~l~~~l~~~-F~~V~~~KP~sSR~~S~E~fvVc~gf 209 (316)
.+...++.. |..+.+.+..+. .+++++++.|
T Consensus 245 ~~~~~l~~~Gf~~v~~~~d~~g----~~r~~~~~~~ 276 (276)
T 2b3t_A 245 AVRQAFILAGYHDVETCRDYGD----NERVTLGRYY 276 (276)
T ss_dssp HHHHHHHHTTCTTCCEEECTTS----SEEEEEEECC
T ss_pred HHHHHHHHCCCcEEEEEecCCC----CCcEEEEEEC
Confidence 666666554 888888776543 4678887654
No 32
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.25 E-value=4.6e-11 Score=112.64 Aligned_cols=125 Identities=14% Similarity=0.127 Sum_probs=87.7
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCCcEEEecCccChhhH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~gV~~i~gDIt~~~t~ 108 (316)
+++.+|||+|||||+++.++++.++ +.++|+|+|+++.+ .+.+|+++++|+++...
T Consensus 101 ~~g~~VLDlcaG~G~kt~~la~~~~------------~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~- 167 (309)
T 2b9e_A 101 PPGSHVIDACAAPGNKTSHLAALLK------------NQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSP- 167 (309)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHT------------TCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCT-
T ss_pred CCCCEEEEeCCChhHHHHHHHHHhC------------CCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCc-
Confidence 5789999999999999999999884 35799999999842 35678999999886431
Q ss_pred HHHHhhcC-CccccEEEeCCCCCCCCCCCc--c-----------HHHHHHHHHHHHHHHHHcccCCcEEEEEEcc---CC
Q 021161 109 EVVIRHFD-GCKADLVVCDGAPDVTGLHDM--D-----------EFVQSQLILAGLTVVTHVLKEGGKFIAKIFR---GK 171 (316)
Q Consensus 109 ~~I~~~~~-~~~~DlVvsDgapdvtG~~~~--d-----------e~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~---~~ 171 (316)
... ..+||.|++|.++..+|.... | -.....++...|..|.++|+ ||.+|..+.. .+
T Consensus 168 -----~~~~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~~~E 241 (309)
T 2b9e_A 168 -----SDPRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLCQEE 241 (309)
T ss_dssp -----TCGGGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCCGGG
T ss_pred -----cccccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCChHH
Confidence 010 147999999987666665211 1 11224455677888888887 9999976554 45
Q ss_pred CHHHHHHHHHhc
Q 021161 172 DTSLLYCQLKLF 183 (316)
Q Consensus 172 ~~~~l~~~l~~~ 183 (316)
+...+.+.|+.+
T Consensus 242 ne~~v~~~l~~~ 253 (309)
T 2b9e_A 242 NEDVVRDALQQN 253 (309)
T ss_dssp THHHHHHHHTTS
T ss_pred hHHHHHHHHHhC
Confidence 666677777765
No 33
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.25 E-value=1.8e-11 Score=109.02 Aligned_cols=119 Identities=19% Similarity=0.201 Sum_probs=87.1
Q ss_pred CCchhhhhhHHhhhHHcCCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC---------
Q 021161 20 GWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------- 90 (316)
Q Consensus 20 g~raRsa~KL~qId~~f~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~--------- 90 (316)
.+|++.+.++.+..+.+. ++++.+|||||||+|.++..++++.+ +.++|+|+|+++.+
T Consensus 57 ~~~~~~~~~~~~~l~~~~-~~~~~~vLDlG~G~G~~~~~la~~~g------------~~~~v~gvD~s~~~i~~~~~~a~ 123 (233)
T 2ipx_A 57 PFRSKLAAAILGGVDQIH-IKPGAKVLYLGAASGTTVSHVSDIVG------------PDGLVYAVEFSHRSGRDLINLAK 123 (233)
T ss_dssp TTTCHHHHHHHTTCSCCC-CCTTCEEEEECCTTSHHHHHHHHHHC------------TTCEEEEECCCHHHHHHHHHHHH
T ss_pred ccchhHHHHHHhHHheec-CCCCCEEEEEcccCCHHHHHHHHHhC------------CCcEEEEEECCHHHHHHHHHHhh
Confidence 457777788877555554 46788999999999999999999874 34799999999631
Q ss_pred CCCCcEEEecCccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEcc
Q 021161 91 PIEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (316)
Q Consensus 91 ~i~gV~~i~gDIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~ 169 (316)
..++++++++|+.+.... .+..++||+|+||.+ ..+. ....+..+.++|||||.|++.+..
T Consensus 124 ~~~~v~~~~~d~~~~~~~-----~~~~~~~D~V~~~~~-------~~~~------~~~~~~~~~~~LkpgG~l~i~~~~ 184 (233)
T 2ipx_A 124 KRTNIIPVIEDARHPHKY-----RMLIAMVDVIFADVA-------QPDQ------TRIVALNAHTFLRNGGHFVISIKA 184 (233)
T ss_dssp HCTTEEEECSCTTCGGGG-----GGGCCCEEEEEECCC-------CTTH------HHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred ccCCeEEEEcccCChhhh-----cccCCcEEEEEEcCC-------CccH------HHHHHHHHHHHcCCCeEEEEEEcc
Confidence 126899999999985321 122468999999864 1221 123356688999999999996653
No 34
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.25 E-value=6.6e-11 Score=102.14 Aligned_cols=111 Identities=18% Similarity=0.252 Sum_probs=79.7
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CC-CCcEEEecCccChh
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNAR 106 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i-~gV~~i~gDIt~~~ 106 (316)
++++.+|||+|||+|.++..++++++ +.++|+|+|+++.+ .+ ++++++++|+.+..
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~------------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 87 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVG------------ENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMD 87 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHC------------TTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGG
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhC------------CCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHh
Confidence 46789999999999999999999874 34699999999842 12 57899999997753
Q ss_pred hHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccC
Q 021161 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG 170 (316)
Q Consensus 107 t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~ 170 (316)
. +..++||+|+++...-..+.+..... ......++..+.++|||||.|++.++.+
T Consensus 88 ~-------~~~~~fD~v~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 142 (197)
T 3eey_A 88 K-------YIDCPVKAVMFNLGYLPSGDHSISTR--PETTIQALSKAMELLVTGGIITVVIYYG 142 (197)
T ss_dssp G-------TCCSCEEEEEEEESBCTTSCTTCBCC--HHHHHHHHHHHHHHEEEEEEEEEEECCB
T ss_pred h-------hccCCceEEEEcCCcccCcccccccC--cccHHHHHHHHHHhCcCCCEEEEEEccC
Confidence 1 23478999999964311111111100 1122457888999999999999988765
No 35
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.25 E-value=1e-10 Score=103.75 Aligned_cols=98 Identities=22% Similarity=0.216 Sum_probs=73.4
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC---------CCCCcEEEecCccChhhHH
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAE 109 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~---------~i~gV~~i~gDIt~~~t~~ 109 (316)
++++.+|||||||||.++..++++.+ .++|+|||+++.+ ...++.++++|+++....
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~-------------~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~- 120 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVD-------------EGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKY- 120 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTT-------------TSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGT-
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcC-------------CCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhh-
Confidence 46889999999999999999999873 3699999999831 145788999999875210
Q ss_pred HHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEE
Q 021161 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (316)
Q Consensus 110 ~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Ki 167 (316)
..+. ++||+|+|+.+. + +. ...++..+.++|||||.|++.+
T Consensus 121 ---~~~~-~~fD~V~~~~~~-----~--~~------~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 121 ---SGIV-EKVDLIYQDIAQ-----K--NQ------IEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp ---TTTC-CCEEEEEECCCS-----T--TH------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred ---cccc-cceeEEEEeccC-----h--hH------HHHHHHHHHHHhCCCCEEEEEE
Confidence 0133 689999998421 1 11 1234678899999999999864
No 36
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.24 E-value=8.3e-12 Score=115.05 Aligned_cols=137 Identities=17% Similarity=0.058 Sum_probs=100.6
Q ss_pred CCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCCcEEEecCccCh
Q 021161 37 NIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNA 105 (316)
Q Consensus 37 ~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~gV~~i~gDIt~~ 105 (316)
..+.++.+|||||||+|.|+..++++.+ .++|+|+|+++.+ .+.++.++++|+.+.
T Consensus 115 ~~~~~~~~VLDlgcG~G~~s~~la~~~~-------------~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~ 181 (272)
T 3a27_A 115 FISNENEVVVDMFAGIGYFTIPLAKYSK-------------PKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDV 181 (272)
T ss_dssp TSCCTTCEEEETTCTTTTTHHHHHHHTC-------------CSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGC
T ss_pred HhcCCCCEEEEecCcCCHHHHHHHHhCC-------------CCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHc
Confidence 3467889999999999999999998863 4699999999842 356789999999874
Q ss_pred hhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccC-----CCHHHHHHHH
Q 021161 106 RTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG-----KDTSLLYCQL 180 (316)
Q Consensus 106 ~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~-----~~~~~l~~~l 180 (316)
. . .++||+|++|.+. +.. ..+..+.++|+|||.+++.++.. .........+
T Consensus 182 ~--------~-~~~~D~Vi~d~p~------~~~---------~~l~~~~~~LkpgG~l~~s~~~~~~~~~~~~~~~~~~~ 237 (272)
T 3a27_A 182 E--------L-KDVADRVIMGYVH------KTH---------KFLDKTFEFLKDRGVIHYHETVAEKIMYERPIERLKFY 237 (272)
T ss_dssp C--------C-TTCEEEEEECCCS------SGG---------GGHHHHHHHEEEEEEEEEEEEEEGGGTTTHHHHHHHHH
T ss_pred C--------c-cCCceEEEECCcc------cHH---------HHHHHHHHHcCCCCEEEEEEcCccccccccHHHHHHHH
Confidence 1 1 3589999999753 122 24667789999999999988764 2233444555
Q ss_pred Hhc-CCceEEecCCCCCCCCcceEEEEeccc
Q 021161 181 KLF-FPVVTFAKPKSSRNSSIEAFAVCENYF 210 (316)
Q Consensus 181 ~~~-F~~V~~~KP~sSR~~S~E~fvVc~gf~ 210 (316)
... ...+.+.+....|.-+...|.+|..|+
T Consensus 238 ~~~~~~~~~~~~~~~v~~~~p~~~~~~~d~~ 268 (272)
T 3a27_A 238 AEKNGYKLIDYEVRKIKKYAPGVWHVVVDAK 268 (272)
T ss_dssp HHHTTEEEEEEEEEEEEEEETTEEEEEEEEE
T ss_pred HHHhCCeeEEeEEEEEEEECCCCCEEEEEEE
Confidence 543 345666666666666677888888886
No 37
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.24 E-value=2.3e-11 Score=111.76 Aligned_cols=101 Identities=24% Similarity=0.196 Sum_probs=76.1
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC------------CCCCcEEEecCccChh
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------------PIEGVIQVQGDITNAR 106 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~------------~i~gV~~i~gDIt~~~ 106 (316)
++++.+|||||||+|.++..|++++.. ++++|+|||+++.+ ...+|+++++|+++.+
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~-----------~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~ 136 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHH-----------DNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIA 136 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCS-----------SSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCC
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCC-----------CCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccc
Confidence 589999999999999999999988741 35799999999831 1236899999998753
Q ss_pred hHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEcc
Q 021161 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (316)
Q Consensus 107 t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~ 169 (316)
.+++|+|+|... +|.+.... ..++|..+.++|||||.|++....
T Consensus 137 ----------~~~~d~v~~~~~-----l~~~~~~~----~~~~l~~i~~~LkpGG~lii~e~~ 180 (261)
T 4gek_A 137 ----------IENASMVVLNFT-----LQFLEPSE----RQALLDKIYQGLNPGGALVLSEKF 180 (261)
T ss_dssp ----------CCSEEEEEEESC-----GGGSCHHH----HHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred ----------ccccccceeeee-----eeecCchh----HhHHHHHHHHHcCCCcEEEEEecc
Confidence 357999999753 22222111 135688899999999999986543
No 38
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.23 E-value=1.5e-11 Score=109.83 Aligned_cols=112 Identities=13% Similarity=0.111 Sum_probs=80.2
Q ss_pred hHHcCCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCC---CCCcEEEecCccChhhHH
Q 021161 33 DEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP---IEGVIQVQGDITNARTAE 109 (316)
Q Consensus 33 d~~f~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~---i~gV~~i~gDIt~~~t~~ 109 (316)
.+....++++.+|||+|||+|.++..++++. .+|+|+|+++.+. -..+.++++|+.+.
T Consensus 33 ~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~~---------------~~v~gvD~s~~~~~~a~~~~~~~~~d~~~~---- 93 (240)
T 3dli_A 33 RRYIPYFKGCRRVLDIGCGRGEFLELCKEEG---------------IESIGVDINEDMIKFCEGKFNVVKSDAIEY---- 93 (240)
T ss_dssp GGGGGGTTTCSCEEEETCTTTHHHHHHHHHT---------------CCEEEECSCHHHHHHHHTTSEEECSCHHHH----
T ss_pred HHHHhhhcCCCeEEEEeCCCCHHHHHHHhCC---------------CcEEEEECCHHHHHHHHhhcceeeccHHHH----
Confidence 3344456788999999999999999998762 5799999998421 12388889998763
Q ss_pred HHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCCCHH
Q 021161 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTS 174 (316)
Q Consensus 110 ~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~~~~ 174 (316)
...+..++||+|+|........ ++. ....+..+.++|||||.|++.+.......
T Consensus 94 --~~~~~~~~fD~i~~~~~l~~~~----~~~-----~~~~l~~~~~~LkpgG~l~~~~~~~~~~~ 147 (240)
T 3dli_A 94 --LKSLPDKYLDGVMISHFVEHLD----PER-----LFELLSLCYSKMKYSSYIVIESPNPTSLY 147 (240)
T ss_dssp --HHTSCTTCBSEEEEESCGGGSC----GGG-----HHHHHHHHHHHBCTTCCEEEEEECTTSHH
T ss_pred --hhhcCCCCeeEEEECCchhhCC----cHH-----HHHHHHHHHHHcCCCcEEEEEeCCcchhH
Confidence 2235668999999976443221 111 24567888999999999999887654433
No 39
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.23 E-value=7.7e-11 Score=115.32 Aligned_cols=125 Identities=21% Similarity=0.191 Sum_probs=91.2
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCC----------CCCcEEEecCccChhhHH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----------IEGVIQVQGDITNARTAE 109 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~----------i~gV~~i~gDIt~~~t~~ 109 (316)
+++.+|||+|||||+++..+++.++ +++|+|+|+++.+- --++.++++|+++...
T Consensus 245 ~~g~~VLDlgaG~G~~t~~la~~~~-------------~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~-- 309 (429)
T 1sqg_A 245 QNGEHILDLCAAPGGKTTHILEVAP-------------EAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQ-- 309 (429)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHCT-------------TCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHH--
T ss_pred CCcCeEEEECCCchHHHHHHHHHcC-------------CCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchh--
Confidence 5688999999999999999999873 37999999998531 0147889999988531
Q ss_pred HHHhhcCCccccEEEeCCCCCCCCCCCc--c---------HHHHHHHHHHHHHHHHHcccCCcEEEEEEcc---CCCHHH
Q 021161 110 VVIRHFDGCKADLVVCDGAPDVTGLHDM--D---------EFVQSQLILAGLTVVTHVLKEGGKFIAKIFR---GKDTSL 175 (316)
Q Consensus 110 ~I~~~~~~~~~DlVvsDgapdvtG~~~~--d---------e~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~---~~~~~~ 175 (316)
.+.+++||+|++|.++..+|.... + -....+++...|..+.++|||||.+|+.++. .++...
T Consensus 310 ----~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~~ene~~ 385 (429)
T 1sqg_A 310 ----WCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQ 385 (429)
T ss_dssp ----HHTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCGGGTHHH
T ss_pred ----hcccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCChhhHHHH
Confidence 244568999999986655554211 1 1112345677889999999999999987654 345556
Q ss_pred HHHHHHhc
Q 021161 176 LYCQLKLF 183 (316)
Q Consensus 176 l~~~l~~~ 183 (316)
+...+..+
T Consensus 386 v~~~l~~~ 393 (429)
T 1sqg_A 386 IKAFLQRT 393 (429)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhC
Confidence 66677664
No 40
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.23 E-value=4.6e-11 Score=109.65 Aligned_cols=96 Identities=16% Similarity=0.087 Sum_probs=76.0
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCC-----CCCCCcEEEecCccChhhHHHHHhh
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-----APIEGVIQVQGDITNARTAEVVIRH 114 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~-----~~i~gV~~i~gDIt~~~t~~~I~~~ 114 (316)
..+.+|||||||+|.++..|+++. .+|+|||+++. ...++|.++++|+.+..
T Consensus 38 ~~~~~vLDvGcGtG~~~~~l~~~~---------------~~v~gvD~s~~ml~~a~~~~~v~~~~~~~e~~~-------- 94 (257)
T 4hg2_A 38 PARGDALDCGCGSGQASLGLAEFF---------------ERVHAVDPGEAQIRQALRHPRVTYAVAPAEDTG-------- 94 (257)
T ss_dssp SCSSEEEEESCTTTTTHHHHHTTC---------------SEEEEEESCHHHHHTCCCCTTEEEEECCTTCCC--------
T ss_pred CCCCCEEEEcCCCCHHHHHHHHhC---------------CEEEEEeCcHHhhhhhhhcCCceeehhhhhhhc--------
Confidence 456799999999999999998653 58999999983 24678999999998764
Q ss_pred cCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccC
Q 021161 115 FDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG 170 (316)
Q Consensus 115 ~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~ 170 (316)
+..++||+|+|..+. |-.+. ..++..+.++|||||.|++-.+..
T Consensus 95 ~~~~sfD~v~~~~~~-----h~~~~-------~~~~~e~~rvLkpgG~l~~~~~~~ 138 (257)
T 4hg2_A 95 LPPASVDVAIAAQAM-----HWFDL-------DRFWAELRRVARPGAVFAAVTYGL 138 (257)
T ss_dssp CCSSCEEEEEECSCC-----TTCCH-------HHHHHHHHHHEEEEEEEEEEEECC
T ss_pred ccCCcccEEEEeeeh-----hHhhH-------HHHHHHHHHHcCCCCEEEEEECCC
Confidence 567899999996543 33442 256788999999999999876653
No 41
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.22 E-value=6.2e-11 Score=107.12 Aligned_cols=118 Identities=19% Similarity=0.235 Sum_probs=82.9
Q ss_pred HHHhCCchhhhhhHHhhhHHcCCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-C---
Q 021161 16 AKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-P--- 91 (316)
Q Consensus 16 ak~~g~raRsa~KL~qId~~f~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-~--- 91 (316)
.+...|.+|+++||.++.+.|.+-..+.+|||||||+|.++..++++. ..+|+|||+++.+ .
T Consensus 12 ~~~~~yvsrg~~kL~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~g--------------~~~V~gvDis~~ml~~a~ 77 (232)
T 3opn_A 12 GEKLRYVSRGGLKLEKALKEFHLEINGKTCLDIGSSTGGFTDVMLQNG--------------AKLVYALDVGTNQLAWKI 77 (232)
T ss_dssp --CCCSSSTTHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTT--------------CSEEEEECSSCCCCCHHH
T ss_pred cCCCCccCCcHHHHHHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhcC--------------CCEEEEEcCCHHHHHHHH
Confidence 344579999999999999999887778899999999999999998862 2499999999853 1
Q ss_pred --CCCcEEEe-cCccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEE
Q 021161 92 --IEGVIQVQ-GDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (316)
Q Consensus 92 --i~gV~~i~-gDIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~K 166 (316)
.+.+.... .++..... ..+....+|.+.+|..... . ..++..+.++|||||.|++-
T Consensus 78 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~d~~~~D~v~~~-----l---------~~~l~~i~rvLkpgG~lv~~ 136 (232)
T 3opn_A 78 RSDERVVVMEQFNFRNAVL-----ADFEQGRPSFTSIDVSFIS-----L---------DLILPPLYEILEKNGEVAAL 136 (232)
T ss_dssp HTCTTEEEECSCCGGGCCG-----GGCCSCCCSEEEECCSSSC-----G---------GGTHHHHHHHSCTTCEEEEE
T ss_pred HhCccccccccceEEEeCH-----hHcCcCCCCEEEEEEEhhh-----H---------HHHHHHHHHhccCCCEEEEE
Confidence 23333221 23322110 1233224688888864321 1 34678899999999999985
No 42
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.22 E-value=3.9e-11 Score=101.91 Aligned_cols=118 Identities=14% Similarity=0.156 Sum_probs=89.4
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCC--cEEEecCccChh
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEG--VIQVQGDITNAR 106 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~g--V~~i~gDIt~~~ 106 (316)
.++.+|||+|||+|.++..++++ . .+|+++|+++.+ .+.+ ++++++|+.+.
T Consensus 51 ~~~~~vLdiG~G~G~~~~~~~~~-~--------------~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~- 114 (194)
T 1dus_A 51 DKDDDILDLGCGYGVIGIALADE-V--------------KSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYEN- 114 (194)
T ss_dssp CTTCEEEEETCTTSHHHHHHGGG-S--------------SEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTT-
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc-C--------------CeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcc-
Confidence 47889999999999999998876 3 689999999832 2455 89999999873
Q ss_pred hHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCCCHHHHHHHHHhcCCc
Q 021161 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFFPV 186 (316)
Q Consensus 107 t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~~~~~l~~~l~~~F~~ 186 (316)
+..++||+|+++.... +.. ......+..+.++|+|||.+++..........+...++..|..
T Consensus 115 --------~~~~~~D~v~~~~~~~----~~~------~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~~~~ 176 (194)
T 1dus_A 115 --------VKDRKYNKIITNPPIR----AGK------EVLHRIIEEGKELLKDNGEIWVVIQTKQGAKSLAKYMKDVFGN 176 (194)
T ss_dssp --------CTTSCEEEEEECCCST----TCH------HHHHHHHHHHHHHEEEEEEEEEEEESTHHHHHHHHHHHHHHSC
T ss_pred --------cccCCceEEEECCCcc----cch------hHHHHHHHHHHHHcCCCCEEEEEECCCCChHHHHHHHHHHhcc
Confidence 2346899999986321 111 1234567888999999999999887765566677777777877
Q ss_pred eEEec
Q 021161 187 VTFAK 191 (316)
Q Consensus 187 V~~~K 191 (316)
+.+.+
T Consensus 177 ~~~~~ 181 (194)
T 1dus_A 177 VETVT 181 (194)
T ss_dssp CEEEE
T ss_pred eEEEe
Confidence 77654
No 43
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.22 E-value=5.9e-11 Score=104.89 Aligned_cols=133 Identities=11% Similarity=-0.038 Sum_probs=88.0
Q ss_pred CcCCCCeEEEECCC-CCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCCcEEEecCccCh
Q 021161 38 IFEGVKRVVDLCAA-PGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNA 105 (316)
Q Consensus 38 ~~~~~~rVLDLcag-PG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~gV~~i~gDIt~~ 105 (316)
.++++.+|||+||| +|.++..++++.. .+|+|+|+++.+ .+ +++++++|+...
T Consensus 52 ~~~~~~~vLDlG~G~~G~~~~~la~~~~--------------~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~ 116 (230)
T 3evz_A 52 FLRGGEVALEIGTGHTAMMALMAEKFFN--------------CKVTATEVDEEFFEYARRNIERNNS-NVRLVKSNGGII 116 (230)
T ss_dssp TCCSSCEEEEECCTTTCHHHHHHHHHHC--------------CEEEEEECCHHHHHHHHHHHHHTTC-CCEEEECSSCSS
T ss_pred hcCCCCEEEEcCCCHHHHHHHHHHHhcC--------------CEEEEEECCHHHHHHHHHHHHHhCC-CcEEEeCCchhh
Confidence 35788999999999 9999999998752 689999999842 13 689999997643
Q ss_pred hhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHH--------HHHHHHHHHHHHHHcccCCcEEEEEEccC-CCHHHH
Q 021161 106 RTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFV--------QSQLILAGLTVVTHVLKEGGKFIAKIFRG-KDTSLL 176 (316)
Q Consensus 106 ~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~--------~~~L~~aaL~~a~~vLkpGG~fV~Kif~~-~~~~~l 176 (316)
. .+..++||+|+||.+....+.....+.. ...+...++..+.++|||||.|++.+... .....+
T Consensus 117 ~-------~~~~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~ 189 (230)
T 3evz_A 117 K-------GVVEGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKEKLLNVI 189 (230)
T ss_dssp T-------TTCCSCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCHHHHHHH
T ss_pred h-------hcccCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccHhHHHHH
Confidence 2 2345789999999643222111100000 01223567889999999999999965443 244566
Q ss_pred HHHHHhcCCceEEecC
Q 021161 177 YCQLKLFFPVVTFAKP 192 (316)
Q Consensus 177 ~~~l~~~F~~V~~~KP 192 (316)
...++...-.+...+.
T Consensus 190 ~~~l~~~g~~~~~~~~ 205 (230)
T 3evz_A 190 KERGIKLGYSVKDIKF 205 (230)
T ss_dssp HHHHHHTTCEEEEEEE
T ss_pred HHHHHHcCCceEEEEe
Confidence 6666665335555544
No 44
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.22 E-value=3.3e-11 Score=104.92 Aligned_cols=116 Identities=18% Similarity=0.082 Sum_probs=86.0
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCCcEEEecCccChhh
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNART 107 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~gV~~i~gDIt~~~t 107 (316)
++++.+|||+|||+|.++..++++. +..+|+++|+++.+ .+++++++++|+.+..
T Consensus 38 ~~~~~~vLDiG~G~G~~~~~la~~~-------------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~- 103 (204)
T 3e05_A 38 LQDDLVMWDIGAGSASVSIEASNLM-------------PNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGL- 103 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHC-------------TTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTC-
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHC-------------CCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhh-
Confidence 3578899999999999999999885 25799999999842 2467999999997531
Q ss_pred HHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCCCHHHHHHHHHhc-CCc
Q 021161 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLF-FPV 186 (316)
Q Consensus 108 ~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~~~~~l~~~l~~~-F~~ 186 (316)
....+||+|++++... + ....+..+.++|+|||.|++..........+...++.. | .
T Consensus 104 -------~~~~~~D~i~~~~~~~-----~---------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~g~-~ 161 (204)
T 3e05_A 104 -------DDLPDPDRVFIGGSGG-----M---------LEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDHGY-M 161 (204)
T ss_dssp -------TTSCCCSEEEESCCTT-----C---------HHHHHHHHHHHCCTTCEEEEEECBHHHHHHHHHHHHHTTC-E
T ss_pred -------hcCCCCCEEEECCCCc-----C---------HHHHHHHHHHhcCCCeEEEEEecccccHHHHHHHHHHCCC-c
Confidence 1125799999987431 1 23567889999999999999766555556666666554 5 5
Q ss_pred eEEe
Q 021161 187 VTFA 190 (316)
Q Consensus 187 V~~~ 190 (316)
+.+.
T Consensus 162 ~~~~ 165 (204)
T 3e05_A 162 VEVA 165 (204)
T ss_dssp EEEE
T ss_pred eeEE
Confidence 4443
No 45
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.20 E-value=9.9e-11 Score=101.35 Aligned_cols=135 Identities=16% Similarity=0.148 Sum_probs=94.1
Q ss_pred CCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC------CCCCcEEEecCccChhhHHHHHhhc
Q 021161 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIRHF 115 (316)
Q Consensus 42 ~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~------~i~gV~~i~gDIt~~~t~~~I~~~~ 115 (316)
+.+|||+|||+|.++..++++. .+|+|+|+++.+ ..+++.++++|+.+.+ +
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~---------------~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~--------~ 98 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLG---------------HQIEGLEPATRLVELARQTHPSVTFHHGTITDLS--------D 98 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTT---------------CCEEEECCCHHHHHHHHHHCTTSEEECCCGGGGG--------G
T ss_pred CCeEEEecCCCCHHHHHHHhcC---------------CeEEEEeCCHHHHHHHHHhCCCCeEEeCcccccc--------c
Confidence 7899999999999999998762 589999999832 2568999999998753 4
Q ss_pred CCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCC---------------CHHHHHHHH
Q 021161 116 DGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK---------------DTSLLYCQL 180 (316)
Q Consensus 116 ~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~---------------~~~~l~~~l 180 (316)
..++||+|+|........ .+. ...++..+.++|||||.|++.++... ....+...+
T Consensus 99 ~~~~fD~v~~~~~l~~~~---~~~------~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 169 (203)
T 3h2b_A 99 SPKRWAGLLAWYSLIHMG---PGE------LPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQAL 169 (203)
T ss_dssp SCCCEEEEEEESSSTTCC---TTT------HHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHH
T ss_pred CCCCeEEEEehhhHhcCC---HHH------HHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHH
Confidence 457999999986432211 111 24567888999999999999876543 356677777
Q ss_pred Hhc-CCceEEecCCCCCCCCcceEEEEecccCC
Q 021161 181 KLF-FPVVTFAKPKSSRNSSIEAFAVCENYFPP 212 (316)
Q Consensus 181 ~~~-F~~V~~~KP~sSR~~S~E~fvVc~gf~~p 212 (316)
+.. |+-+.+..-.. ....+++.....++
T Consensus 170 ~~~Gf~~~~~~~~~~----~p~~~l~~~~~~~~ 198 (203)
T 3h2b_A 170 ETAGFQVTSSHWDPR----FPHAYLTAEASLEH 198 (203)
T ss_dssp HHTTEEEEEEEECTT----SSEEEEEEEECC--
T ss_pred HHCCCcEEEEEecCC----Ccchhhhhhhhhhh
Confidence 654 76665543211 33556665554443
No 46
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=99.20 E-value=3.2e-11 Score=116.14 Aligned_cols=124 Identities=22% Similarity=0.210 Sum_probs=88.0
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC--------------C---CCCcEEEecCc
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------------P---IEGVIQVQGDI 102 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~--------------~---i~gV~~i~gDI 102 (316)
++|.+|||+||||||.|.+|++.+. .+.|+|+|+++.. . ..+|.+...|.
T Consensus 147 ~pg~~VLD~CAaPGGKT~~la~~~~-------------~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~ 213 (359)
T 4fzv_A 147 QPGDIVLDLCAAPGGKTLALLQTGC-------------CRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDG 213 (359)
T ss_dssp CTTEEEEESSCTTCHHHHHHHHTTC-------------EEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCG
T ss_pred CCCCEEEEecCCccHHHHHHHHhcC-------------CCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCch
Confidence 5789999999999999999998653 4689999999731 0 13577778888
Q ss_pred cChhhHHHHHhhcCCccccEEEeCCCCCCC--CCC--Ccc------H---HHHHHHHHHHHHHHHHcccCCcEEEEEEcc
Q 021161 103 TNARTAEVVIRHFDGCKADLVVCDGAPDVT--GLH--DMD------E---FVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (316)
Q Consensus 103 t~~~t~~~I~~~~~~~~~DlVvsDgapdvt--G~~--~~d------e---~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~ 169 (316)
+... .+..+.||.|++|.++..+ |.. +.+ . .....++...|..|..+|||||.+|..+..
T Consensus 214 ~~~~-------~~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCS 286 (359)
T 4fzv_A 214 RKWG-------ELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCS 286 (359)
T ss_dssp GGHH-------HHSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESC
T ss_pred hhcc-------hhccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCC
Confidence 7643 1345789999999865543 221 111 1 112446677888999999999999977654
Q ss_pred ---CCCHHHHHHHHHhc
Q 021161 170 ---GKDTSLLYCQLKLF 183 (316)
Q Consensus 170 ---~~~~~~l~~~l~~~ 183 (316)
.++...+.+.|+.+
T Consensus 287 l~~~ENE~vV~~~L~~~ 303 (359)
T 4fzv_A 287 LSHLQNEYVVQGAIELL 303 (359)
T ss_dssp CCTTTTHHHHHHHHHHH
T ss_pred CchhhCHHHHHHHHHhC
Confidence 45666666767654
No 47
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.18 E-value=1.4e-10 Score=101.06 Aligned_cols=157 Identities=16% Similarity=0.147 Sum_probs=100.3
Q ss_pred hCCchhhhhhHHhhhHHcCCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----CCC
Q 021161 19 EGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----PIE 93 (316)
Q Consensus 19 ~g~raRsa~KL~qId~~f~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----~i~ 93 (316)
..+..|.......+.+.+.. .++.+|||+|||+|.++..++++ + .+|+|+|+++.+ ...
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~-~--------------~~v~~vD~s~~~~~~a~~~~ 94 (227)
T 3e8s_A 31 GAIESRRQVTDQAILLAILG-RQPERVLDLGCGEGWLLRALADR-G--------------IEAVGVDGDRTLVDAARAAG 94 (227)
T ss_dssp TCCHHHHHTHHHHHHHHHHH-TCCSEEEEETCTTCHHHHHHHTT-T--------------CEEEEEESCHHHHHHHHHTC
T ss_pred cccccccccccHHHHHHhhc-CCCCEEEEeCCCCCHHHHHHHHC-C--------------CEEEEEcCCHHHHHHHHHhc
Confidence 33444433333333333332 35689999999999999998875 2 589999999842 135
Q ss_pred CcEEEecCccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccC---
Q 021161 94 GVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG--- 170 (316)
Q Consensus 94 gV~~i~gDIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~--- 170 (316)
++.+.++|+.+.... ....+.+||+|+|..... ..+. ..++..+.++|||||.|++..+..
T Consensus 95 ~~~~~~~~~~~~~~~----~~~~~~~fD~v~~~~~l~---~~~~---------~~~l~~~~~~L~pgG~l~~~~~~~~~~ 158 (227)
T 3e8s_A 95 AGEVHLASYAQLAEA----KVPVGKDYDLICANFALL---HQDI---------IELLSAMRTLLVPGGALVIQTLHPWSV 158 (227)
T ss_dssp SSCEEECCHHHHHTT----CSCCCCCEEEEEEESCCC---SSCC---------HHHHHHHHHTEEEEEEEEEEECCTTTT
T ss_pred ccccchhhHHhhccc----ccccCCCccEEEECchhh---hhhH---------HHHHHHHHHHhCCCeEEEEEecCcccc
Confidence 677888887664210 112345699999986543 2222 256788899999999999976521
Q ss_pred ----------------------------CCHHHHHHHHHhc-CCceEEecCCCCCCC-CcceEEEEe
Q 021161 171 ----------------------------KDTSLLYCQLKLF-FPVVTFAKPKSSRNS-SIEAFAVCE 207 (316)
Q Consensus 171 ----------------------------~~~~~l~~~l~~~-F~~V~~~KP~sSR~~-S~E~fvVc~ 207 (316)
.....+...++.. |+-+.+..|...... ....++|++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~va~ 225 (227)
T 3e8s_A 159 ADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRLVSLQEPQHPQSAVPQSLLMVAE 225 (227)
T ss_dssp CTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEEEEEECCCCTTCSSCSCEEEEEE
T ss_pred CccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCeEEEEecCCCCCCCCceeEEEEee
Confidence 1446677777665 887777765543332 234566665
No 48
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.15 E-value=3e-10 Score=101.24 Aligned_cols=108 Identities=11% Similarity=0.037 Sum_probs=78.3
Q ss_pred CcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC--------CCCCcEEEecCccChhhHH
Q 021161 38 IFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------PIEGVIQVQGDITNARTAE 109 (316)
Q Consensus 38 ~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~--------~i~gV~~i~gDIt~~~t~~ 109 (316)
.+.++.+|||||||+|.++..++++. .+|+|+|+++.+ +..+++++++|+.+.....
T Consensus 53 ~~~~~~~vLD~GcG~G~~~~~la~~~---------------~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~ 117 (245)
T 3ggd_A 53 LFNPELPLIDFACGNGTQTKFLSQFF---------------PRVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAA 117 (245)
T ss_dssp TSCTTSCEEEETCTTSHHHHHHHHHS---------------SCEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHH
T ss_pred ccCCCCeEEEEcCCCCHHHHHHHHhC---------------CCEEEEECCHHHHHHHHHhCcccCceEEECccccccccc
Confidence 35788999999999999999999875 389999999832 2348999999999975432
Q ss_pred HHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCCC
Q 021161 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKD 172 (316)
Q Consensus 110 ~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~~ 172 (316)
.+- .+..+|+|+|...... .+.. -...++..+.++|||||.+++..+...+
T Consensus 118 ~~~---~~~~~d~v~~~~~~~~-----~~~~----~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 168 (245)
T 3ggd_A 118 QIH---SEIGDANIYMRTGFHH-----IPVE----KRELLGQSLRILLGKQGAMYLIELGTGC 168 (245)
T ss_dssp HHH---HHHCSCEEEEESSSTT-----SCGG----GHHHHHHHHHHHHTTTCEEEEEEECTTH
T ss_pred ccc---cccCccEEEEcchhhc-----CCHH----HHHHHHHHHHHHcCCCCEEEEEeCCccc
Confidence 211 1235999999864322 2210 0245678889999999998887776543
No 49
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.15 E-value=3e-10 Score=101.71 Aligned_cols=96 Identities=22% Similarity=0.284 Sum_probs=75.4
Q ss_pred CcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCC-CcEEEecCccCh
Q 021161 38 IFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITNA 105 (316)
Q Consensus 38 ~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~-gV~~i~gDIt~~ 105 (316)
-+.++.+|||+|||+|.++..++++.+ .+|+|+|+++.+ .+. +++++++|+.+.
T Consensus 43 ~~~~~~~vLDiG~G~G~~~~~l~~~~~--------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 108 (257)
T 3f4k_A 43 ELTDDAKIADIGCGTGGQTLFLADYVK--------------GQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNL 108 (257)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHCC--------------SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC
T ss_pred cCCCCCeEEEeCCCCCHHHHHHHHhCC--------------CeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhC
Confidence 346788999999999999999998863 499999999832 233 389999999875
Q ss_pred hhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEE
Q 021161 106 RTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (316)
Q Consensus 106 ~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Ki 167 (316)
+ +..++||+|+|.+... ..+. ..++..+.++|||||.+++..
T Consensus 109 ~--------~~~~~fD~v~~~~~l~-----~~~~-------~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 109 P--------FQNEELDLIWSEGAIY-----NIGF-------ERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp S--------SCTTCEEEEEEESCSC-----CCCH-------HHHHHHHHTTEEEEEEEEEEE
T ss_pred C--------CCCCCEEEEEecChHh-----hcCH-------HHHHHHHHHHcCCCcEEEEEE
Confidence 3 4457899999987542 2231 356788999999999999875
No 50
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.15 E-value=2.6e-10 Score=102.10 Aligned_cols=100 Identities=16% Similarity=0.120 Sum_probs=76.8
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC---------CCCCcEEEecCccChhhHH
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAE 109 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~---------~i~gV~~i~gDIt~~~t~~ 109 (316)
+.++.+|||+|||+|.++..++++.+ .+|+|+|+++.+ ..++++++++|+.+.+
T Consensus 53 ~~~~~~vLdiG~G~G~~~~~l~~~~~--------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~--- 115 (266)
T 3ujc_A 53 LNENSKVLDIGSGLGGGCMYINEKYG--------------AHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKE--- 115 (266)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC--------------CEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCC---
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHcC--------------CEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCC---
Confidence 35788999999999999999998763 699999999831 1268999999998753
Q ss_pred HHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEcc
Q 021161 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (316)
Q Consensus 110 ~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~ 169 (316)
+..++||+|+|..... .+.. .-...++..+.++|||||.+++..+.
T Consensus 116 -----~~~~~fD~v~~~~~l~-----~~~~----~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (266)
T 3ujc_A 116 -----FPENNFDLIYSRDAIL-----ALSL----ENKNKLFQKCYKWLKPTGTLLITDYC 161 (266)
T ss_dssp -----CCTTCEEEEEEESCGG-----GSCH----HHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred -----CCCCcEEEEeHHHHHH-----hcCh----HHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 4567999999975432 2211 11246688899999999999987653
No 51
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.15 E-value=2.6e-10 Score=99.64 Aligned_cols=129 Identities=16% Similarity=0.121 Sum_probs=93.6
Q ss_pred hhhHHcCCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCCcEEEe
Q 021161 31 QIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQ 99 (316)
Q Consensus 31 qId~~f~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~gV~~i~ 99 (316)
.+.+.+. +.++.+|||+|||+|.++..++++.+ +..+|+++|+++.+ .++++++++
T Consensus 28 ~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~~~~------------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~ 94 (219)
T 3dh0_A 28 KVLKEFG-LKEGMTVLDVGTGAGFYLPYLSKMVG------------EKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLK 94 (219)
T ss_dssp HHHHHHT-CCTTCEEEESSCTTCTTHHHHHHHHT------------TTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEE
T ss_pred HHHHHhC-CCCCCEEEEEecCCCHHHHHHHHHhC------------CCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe
Confidence 3444444 35778999999999999999999873 34799999999831 245799999
Q ss_pred cCccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCC--------
Q 021161 100 GDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK-------- 171 (316)
Q Consensus 100 gDIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~-------- 171 (316)
+|+.+.. +..++||+|+|..... .... ...++..+.++|+|||.+++..+...
T Consensus 95 ~d~~~~~--------~~~~~fD~v~~~~~l~-----~~~~------~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~ 155 (219)
T 3dh0_A 95 SEENKIP--------LPDNTVDFIFMAFTFH-----ELSE------PLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPP 155 (219)
T ss_dssp CBTTBCS--------SCSSCEEEEEEESCGG-----GCSS------HHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCG
T ss_pred cccccCC--------CCCCCeeEEEeehhhh-----hcCC------HHHHHHHHHHHhCCCeEEEEEEecccccccCCch
Confidence 9998753 4567899999986432 1211 14567888999999999999765421
Q ss_pred ----CHHHHHHHHHhc-CCceEEec
Q 021161 172 ----DTSLLYCQLKLF-FPVVTFAK 191 (316)
Q Consensus 172 ----~~~~l~~~l~~~-F~~V~~~K 191 (316)
+...+...++.. |+.+.+..
T Consensus 156 ~~~~~~~~~~~~l~~~Gf~~~~~~~ 180 (219)
T 3dh0_A 156 EEVYSEWEVGLILEDAGIRVGRVVE 180 (219)
T ss_dssp GGSCCHHHHHHHHHHTTCEEEEEEE
T ss_pred hcccCHHHHHHHHHHCCCEEEEEEe
Confidence 346677777665 87766643
No 52
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.14 E-value=7.7e-11 Score=108.76 Aligned_cols=113 Identities=15% Similarity=0.021 Sum_probs=82.8
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCC-cEEEecCccChh
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEG-VIQVQGDITNAR 106 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~g-V~~i~gDIt~~~ 106 (316)
++++.+|||+|||+|.|+..++++.. .+|+|+|+++.+ .+.+ ++++++|+.+..
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~~--------------~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~ 188 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYGK--------------AKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP 188 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTC--------------CEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC
T ss_pred CCCCCEEEEecccCCHHHHHHHHhCC--------------CEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhc
Confidence 46789999999999999999998753 279999999842 2343 889999998753
Q ss_pred hHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccC------CCHHHHHHHH
Q 021161 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG------KDTSLLYCQL 180 (316)
Q Consensus 107 t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~------~~~~~l~~~l 180 (316)
...+||+|++|..+.. ...+..+.++|||||.|++..+.. .....+...+
T Consensus 189 ---------~~~~fD~Vi~~~p~~~---------------~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~ 244 (278)
T 2frn_A 189 ---------GENIADRILMGYVVRT---------------HEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRIT 244 (278)
T ss_dssp ---------CCSCEEEEEECCCSSG---------------GGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHH
T ss_pred ---------ccCCccEEEECCchhH---------------HHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHH
Confidence 2578999999864321 134667889999999999877752 3345555656
Q ss_pred HhcCCceEE
Q 021161 181 KLFFPVVTF 189 (316)
Q Consensus 181 ~~~F~~V~~ 189 (316)
+..-..+..
T Consensus 245 ~~~G~~~~~ 253 (278)
T 2frn_A 245 KEYGYDVEK 253 (278)
T ss_dssp HHTTCEEEE
T ss_pred HHcCCeeEE
Confidence 554334444
No 53
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.14 E-value=1.9e-10 Score=103.40 Aligned_cols=115 Identities=17% Similarity=0.137 Sum_probs=86.4
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCC-cEEEecCccChh
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEG-VIQVQGDITNAR 106 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~g-V~~i~gDIt~~~ 106 (316)
+.++.+|||+|||+|.++..+++.++ +..+|+++|+++.+ .+++ ++++++|+.+.
T Consensus 91 ~~~~~~vldiG~G~G~~~~~l~~~~~------------~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~- 157 (255)
T 3mb5_A 91 ISPGDFIVEAGVGSGALTLFLANIVG------------PEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG- 157 (255)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHC------------TTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC-
T ss_pred CCCCCEEEEecCCchHHHHHHHHHhC------------CCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc-
Confidence 36788999999999999999999864 35799999999731 2455 89999999853
Q ss_pred hHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCCCHHHHHHHHHhc---
Q 021161 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLF--- 183 (316)
Q Consensus 107 t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~~~~~l~~~l~~~--- 183 (316)
+..++||+|++|.. + . ..++..+.++|+|||.+++-.........+...++..
T Consensus 158 --------~~~~~~D~v~~~~~-~------~---------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~g~~ 213 (255)
T 3mb5_A 158 --------IEEENVDHVILDLP-Q------P---------ERVVEHAAKALKPGGFFVAYTPCSNQVMRLHEKLREFKDY 213 (255)
T ss_dssp --------CCCCSEEEEEECSS-C------G---------GGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHTGGG
T ss_pred --------cCCCCcCEEEECCC-C------H---------HHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCC
Confidence 45578999999853 1 1 1346788999999999998664444455566666654
Q ss_pred CCceEEe
Q 021161 184 FPVVTFA 190 (316)
Q Consensus 184 F~~V~~~ 190 (316)
|..+.+.
T Consensus 214 f~~~~~~ 220 (255)
T 3mb5_A 214 FMKPRTI 220 (255)
T ss_dssp BSCCEEE
T ss_pred ccccEEE
Confidence 7776664
No 54
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.14 E-value=1.3e-10 Score=105.31 Aligned_cols=97 Identities=19% Similarity=0.252 Sum_probs=75.7
Q ss_pred CcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CC-CCcEEEecCccCh
Q 021161 38 IFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNA 105 (316)
Q Consensus 38 ~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i-~gV~~i~gDIt~~ 105 (316)
-+.++.+|||+|||+|.++..+++. + .++|+|+|+++.+ .+ ++++++++|+.+.
T Consensus 43 ~~~~~~~vLDiGcG~G~~~~~la~~-~-------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 108 (267)
T 3kkz_A 43 NLTEKSLIADIGCGTGGQTMVLAGH-V-------------TGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDL 108 (267)
T ss_dssp CCCTTCEEEEETCTTCHHHHHHHTT-C-------------SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC
T ss_pred cCCCCCEEEEeCCCCCHHHHHHHhc-c-------------CCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhC
Confidence 3567899999999999999999876 2 3699999999841 12 4599999999875
Q ss_pred hhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEc
Q 021161 106 RTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (316)
Q Consensus 106 ~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif 168 (316)
+ +..++||+|+|.+.... .+ ...++..+.++|||||.|++..+
T Consensus 109 ~--------~~~~~fD~i~~~~~~~~-----~~-------~~~~l~~~~~~LkpgG~l~~~~~ 151 (267)
T 3kkz_A 109 P--------FRNEELDLIWSEGAIYN-----IG-------FERGLNEWRKYLKKGGYLAVSEC 151 (267)
T ss_dssp C--------CCTTCEEEEEESSCGGG-----TC-------HHHHHHHHGGGEEEEEEEEEEEE
T ss_pred C--------CCCCCEEEEEEcCCcee-----cC-------HHHHHHHHHHHcCCCCEEEEEEe
Confidence 3 34578999999875432 22 13568889999999999998754
No 55
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.14 E-value=2.5e-10 Score=98.31 Aligned_cols=100 Identities=15% Similarity=0.092 Sum_probs=73.1
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCCcEEEecCccChhhH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~gV~~i~gDIt~~~t~ 108 (316)
.++.+|||||||+|.++..++++. ..+|+|+|+++.+ .+.+++++++|+.+..
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~--------------~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-- 106 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRG--------------AASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVV-- 106 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTT--------------CSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHH--
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCC--------------CCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHH--
Confidence 467899999999999999877642 3589999999832 2467999999997642
Q ss_pred HHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHH--cccCCcEEEEEEcc
Q 021161 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTH--VLKEGGKFIAKIFR 169 (316)
Q Consensus 109 ~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~--vLkpGG~fV~Kif~ 169 (316)
..+..++||+|++|.+.. ... .....++..+.+ +|+|||.|++....
T Consensus 107 ----~~~~~~~fD~i~~~~p~~-----~~~-----~~~~~~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 107 ----AAGTTSPVDLVLADPPYN-----VDS-----ADVDAILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp ----HHCCSSCCSEEEECCCTT-----SCH-----HHHHHHHHHHHHSSSCCTTCEEEEEEET
T ss_pred ----hhccCCCccEEEECCCCC-----cch-----hhHHHHHHHHHhcCccCCCeEEEEEecC
Confidence 234457899999996421 111 123455666777 99999999997654
No 56
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.14 E-value=2.7e-10 Score=102.07 Aligned_cols=95 Identities=20% Similarity=0.098 Sum_probs=73.2
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC--------CCCCcEEEecCccChhhHHHHH
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------PIEGVIQVQGDITNARTAEVVI 112 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~--------~i~gV~~i~gDIt~~~t~~~I~ 112 (316)
++.+|||||||+|.++..++++.. .+|+|+|+++.+ ...++.++++|+.+..
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~--------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~------ 103 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGA--------------KKVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIA------ 103 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTC--------------SEEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCC------
T ss_pred CCCEEEEECCCCCHHHHHHHHcCC--------------CEEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCC------
Confidence 678999999999999999988642 389999999831 2367999999998753
Q ss_pred hhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEc
Q 021161 113 RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (316)
Q Consensus 113 ~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif 168 (316)
+..++||+|+|..... .... ...++..+.++|||||.|++.+.
T Consensus 104 --~~~~~fD~v~~~~~l~-----~~~~------~~~~l~~~~~~LkpgG~l~~~~~ 146 (253)
T 3g5l_A 104 --IEPDAYNVVLSSLALH-----YIAS------FDDICKKVYINLKSSGSFIFSVE 146 (253)
T ss_dssp --CCTTCEEEEEEESCGG-----GCSC------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred --CCCCCeEEEEEchhhh-----hhhh------HHHHHHHHHHHcCCCcEEEEEeC
Confidence 4457899999986432 1211 24568889999999999999643
No 57
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.14 E-value=2.3e-10 Score=105.75 Aligned_cols=113 Identities=11% Similarity=0.008 Sum_probs=81.2
Q ss_pred HHhhhHHcCCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCC-CcE
Q 021161 29 LLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVI 96 (316)
Q Consensus 29 L~qId~~f~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~-gV~ 96 (316)
+..+.+..+ ++++.+|||+|||+|.++..++++.+ .+|+|+|+++.+ .++ +++
T Consensus 61 ~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~la~~~~--------------~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~ 125 (302)
T 3hem_A 61 RKLALDKLN-LEPGMTLLDIGCGWGSTMRHAVAEYD--------------VNVIGLTLSENQYAHDKAMFDEVDSPRRKE 125 (302)
T ss_dssp HHHHHHTTC-CCTTCEEEEETCTTSHHHHHHHHHHC--------------CEEEEEECCHHHHHHHHHHHHHSCCSSCEE
T ss_pred HHHHHHHcC-CCCcCEEEEeeccCcHHHHHHHHhCC--------------CEEEEEECCHHHHHHHHHHHHhcCCCCceE
Confidence 334444443 36789999999999999999999863 689999999842 233 688
Q ss_pred EEecCccChhhHHHHHhhcCCccccEEEeCCCCCCCCCC----CccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCCC
Q 021161 97 QVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLH----DMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKD 172 (316)
Q Consensus 97 ~i~gDIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~----~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~~ 172 (316)
++++|+.+. .++||+|+|.......... ..+. ....+..+.++|||||.|++..+....
T Consensus 126 ~~~~d~~~~-----------~~~fD~v~~~~~~~~~~d~~~~~~~~~------~~~~l~~~~~~LkpgG~l~i~~~~~~~ 188 (302)
T 3hem_A 126 VRIQGWEEF-----------DEPVDRIVSLGAFEHFADGAGDAGFER------YDTFFKKFYNLTPDDGRMLLHTITIPD 188 (302)
T ss_dssp EEECCGGGC-----------CCCCSEEEEESCGGGTTCCSSCCCTTH------HHHHHHHHHHSSCTTCEEEEEEEECCC
T ss_pred EEECCHHHc-----------CCCccEEEEcchHHhcCccccccchhH------HHHHHHHHHHhcCCCcEEEEEEEeccC
Confidence 999999752 4789999998654322000 0111 245678899999999999998776544
Q ss_pred H
Q 021161 173 T 173 (316)
Q Consensus 173 ~ 173 (316)
.
T Consensus 189 ~ 189 (302)
T 3hem_A 189 K 189 (302)
T ss_dssp H
T ss_pred c
Confidence 3
No 58
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.13 E-value=3e-10 Score=109.28 Aligned_cols=128 Identities=18% Similarity=0.148 Sum_probs=89.9
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC------C-----------C--CCcEEEe
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------P-----------I--EGVIQVQ 99 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~------~-----------i--~gV~~i~ 99 (316)
+.++.+|||||||+|.|+..+++..+ +..+|+|+|+++.+ . . ++|.+++
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~------------~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~ 148 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVG------------EHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLK 148 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHT------------TTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEE
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhC------------CCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEE
Confidence 35788999999999999999999874 35799999999831 1 1 5899999
Q ss_pred cCccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccC---------
Q 021161 100 GDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG--------- 170 (316)
Q Consensus 100 gDIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~--------- 170 (316)
+|+.+..... ...+..++||+|+|+...... .+ ...+|..+.++|||||.|++..+..
T Consensus 149 ~d~~~l~~~~--~~~~~~~~fD~V~~~~~l~~~----~d-------~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~ 215 (383)
T 4fsd_A 149 GFIENLATAE--PEGVPDSSVDIVISNCVCNLS----TN-------KLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQ 215 (383)
T ss_dssp SCTTCGGGCB--SCCCCTTCEEEEEEESCGGGC----SC-------HHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHH
T ss_pred ccHHHhhhcc--cCCCCCCCEEEEEEccchhcC----CC-------HHHHHHHHHHHcCCCCEEEEEEeccccccCHhHh
Confidence 9999852100 001456789999998754221 12 1366888999999999999865321
Q ss_pred -------------CCHHHHHHHHHhc-CCceEEec
Q 021161 171 -------------KDTSLLYCQLKLF-FPVVTFAK 191 (316)
Q Consensus 171 -------------~~~~~l~~~l~~~-F~~V~~~K 191 (316)
.....+...|+.. |+.+.+..
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~~~ 250 (383)
T 4fsd_A 216 QDPILYGECLGGALYLEDFRRLVAEAGFRDVRLVS 250 (383)
T ss_dssp HCHHHHHTTCTTCCBHHHHHHHHHHTTCCCEEEEE
T ss_pred hhHHHhhcccccCCCHHHHHHHHHHCCCceEEEEe
Confidence 1225566666654 87776543
No 59
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.13 E-value=3.7e-10 Score=99.33 Aligned_cols=105 Identities=16% Similarity=0.052 Sum_probs=80.5
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCC-CcEEEecCccChhh
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITNART 107 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~-gV~~i~gDIt~~~t 107 (316)
.++.+|||||||+|.++..++++ . .+|+|+|+++.+ .++ +++++++|+.+.-
T Consensus 54 ~~~~~vLDlGcG~G~~~~~la~~-~--------------~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~- 117 (204)
T 3njr_A 54 RRGELLWDIGGGSGSVSVEWCLA-G--------------GRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAAL- 117 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-T--------------CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGG-
T ss_pred CCCCEEEEecCCCCHHHHHHHHc-C--------------CEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhc-
Confidence 57789999999999999999886 3 689999999842 245 7999999998731
Q ss_pred HHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCCCHHHHHHHHHhc
Q 021161 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLF 183 (316)
Q Consensus 108 ~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~~~~~l~~~l~~~ 183 (316)
.....||+|++++.. + .. ++..+.++|||||.|++......+...+...++..
T Consensus 118 -------~~~~~~D~v~~~~~~--------~-------~~-~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~ 170 (204)
T 3njr_A 118 -------ADLPLPEAVFIGGGG--------S-------QA-LYDRLWEWLAPGTRIVANAVTLESETLLTQLHARH 170 (204)
T ss_dssp -------TTSCCCSEEEECSCC--------C-------HH-HHHHHHHHSCTTCEEEEEECSHHHHHHHHHHHHHH
T ss_pred -------ccCCCCCEEEECCcc--------c-------HH-HHHHHHHhcCCCcEEEEEecCcccHHHHHHHHHhC
Confidence 112479999998622 1 12 57788899999999999877666666666666654
No 60
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.12 E-value=2.7e-10 Score=111.16 Aligned_cols=102 Identities=18% Similarity=0.251 Sum_probs=78.4
Q ss_pred CCCCeEEEECCC------CCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCC--CCCcEEEecCccChhhHHHH
Q 021161 40 EGVKRVVDLCAA------PGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--IEGVIQVQGDITNARTAEVV 111 (316)
Q Consensus 40 ~~~~rVLDLcag------PG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~--i~gV~~i~gDIt~~~t~~~I 111 (316)
.+..+||||||| +|+++..++++.. ++++|+|||+++.+. .+++++++||+.+.+....+
T Consensus 215 ~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~f------------P~a~V~GVDiSp~m~~~~~rI~fv~GDa~dlpf~~~l 282 (419)
T 3sso_A 215 NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFF------------PRGQIYGLDIMDKSHVDELRIRTIQGDQNDAEFLDRI 282 (419)
T ss_dssp TSCCEEEEECCSCTTCSSCCCHHHHHHHHHC------------TTCEEEEEESSCCGGGCBTTEEEEECCTTCHHHHHHH
T ss_pred CCCCEEEEEecCCCcCCCCCHHHHHHHHHhC------------CCCEEEEEECCHHHhhcCCCcEEEEecccccchhhhh
Confidence 467899999999 7888888877653 357999999999643 46899999999998765444
Q ss_pred HhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEE
Q 021161 112 IRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (316)
Q Consensus 112 ~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Ki 167 (316)
... .++||+|+||++ |.... ...+|..+.++|||||.|++..
T Consensus 283 ~~~--d~sFDlVisdgs------H~~~d------~~~aL~el~rvLKPGGvlVi~D 324 (419)
T 3sso_A 283 ARR--YGPFDIVIDDGS------HINAH------VRTSFAALFPHVRPGGLYVIED 324 (419)
T ss_dssp HHH--HCCEEEEEECSC------CCHHH------HHHHHHHHGGGEEEEEEEEEEC
T ss_pred hcc--cCCccEEEECCc------ccchh------HHHHHHHHHHhcCCCeEEEEEe
Confidence 332 258999999874 22221 2467889999999999999974
No 61
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.12 E-value=9.8e-10 Score=93.24 Aligned_cols=125 Identities=16% Similarity=0.144 Sum_probs=90.1
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC------CCCCcEEEecCccChhhHHHHH
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVI 112 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~------~i~gV~~i~gDIt~~~t~~~I~ 112 (316)
+.++.+|||+|||+|.++..+++. + .+|+++|+++.+ ..+++.++++|+.+..
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~-~--------------~~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~------ 102 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQ-G--------------HDVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQ------ 102 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHT-T--------------CEEEEEESCHHHHHHHHHHCTTSEEEECCTTTSC------
T ss_pred ccCCCeEEEECCCCCHHHHHHHHC-C--------------CcEEEEcCCHHHHHHHHHhCCCCcEEEcccccCC------
Confidence 568899999999999999999875 2 589999999832 2567999999998743
Q ss_pred hhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccC--CCHHHHHHHHHhc-CCceEE
Q 021161 113 RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG--KDTSLLYCQLKLF-FPVVTF 189 (316)
Q Consensus 113 ~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~--~~~~~l~~~l~~~-F~~V~~ 189 (316)
+..++||+|++++. +. +.... ......+..+.++|+|||.+++.+... .....+...+... |+.+.+
T Consensus 103 --~~~~~~D~i~~~~~--~~--~~~~~----~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 172 (195)
T 3cgg_A 103 --ISETDFDLIVSAGN--VM--GFLAE----DGREPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAERVGLELENA 172 (195)
T ss_dssp --CCCCCEEEEEECCC--CG--GGSCH----HHHHHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTEEEEEE
T ss_pred --CCCCceeEEEECCc--HH--hhcCh----HHHHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCCEEeee
Confidence 34578999999742 11 11111 112456788899999999999976554 3566777666654 776766
Q ss_pred ecCCC
Q 021161 190 AKPKS 194 (316)
Q Consensus 190 ~KP~s 194 (316)
.....
T Consensus 173 ~~~~~ 177 (195)
T 3cgg_A 173 FESWD 177 (195)
T ss_dssp ESSTT
T ss_pred ecccc
Confidence 55533
No 62
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.12 E-value=2.5e-10 Score=100.96 Aligned_cols=114 Identities=17% Similarity=0.149 Sum_probs=78.9
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCC-CcEEEecCccChhh
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITNART 107 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~-gV~~i~gDIt~~~t 107 (316)
.++.+|||||||+|.++..+++.++ ++++|++||+++.+ .+. +|+++++|+.+.
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~------------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-- 122 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQ------------PGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDL-- 122 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSC------------TTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHH--
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCC------------CCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHH--
Confidence 4678999999999999999998764 35799999999832 132 489999998652
Q ss_pred HHHHHhhcC----CccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCCCHHHHHHHHHhc
Q 021161 108 AEVVIRHFD----GCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLF 183 (316)
Q Consensus 108 ~~~I~~~~~----~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~~~~~l~~~l~~~ 183 (316)
+..+. .++||+|++|+... .+.. ....+..+ ++|||||.|++..........+...++..
T Consensus 123 ----l~~~~~~~~~~~fD~V~~d~~~~--------~~~~---~~~~~~~~-~~LkpgG~lv~~~~~~~~~~~~~~~l~~~ 186 (221)
T 3u81_A 123 ----IPQLKKKYDVDTLDMVFLDHWKD--------RYLP---DTLLLEKC-GLLRKGTVLLADNVIVPGTPDFLAYVRGS 186 (221)
T ss_dssp ----GGGTTTTSCCCCCSEEEECSCGG--------GHHH---HHHHHHHT-TCCCTTCEEEESCCCCCCCHHHHHHHHHC
T ss_pred ----HHHHHHhcCCCceEEEEEcCCcc--------cchH---HHHHHHhc-cccCCCeEEEEeCCCCcchHHHHHHHhhC
Confidence 11222 26899999996421 1111 12334444 99999999998755444556666666654
No 63
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.12 E-value=6.4e-10 Score=100.26 Aligned_cols=97 Identities=21% Similarity=0.239 Sum_probs=72.8
Q ss_pred CCCeEEEECCCCCHHHHHHHHH---hCCCCCCCCCCCCCCCCEEEEEeCCCCC-C-----CCCcEEEecCccChhhHHHH
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRK---LYLPAKLSPDSREGDLPLIVAIDLQPMA-P-----IEGVIQVQGDITNARTAEVV 111 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~---l~~~~~~~~~~~~~~~~~IvaVDl~~~~-~-----i~gV~~i~gDIt~~~t~~~I 111 (316)
++.+|||||||+|.++..+++. +. ++++|+|||+++.+ . ..+|++++||+.+..++
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~------------~~~~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l--- 145 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMG------------IDCQVIGIDRDLSRCQIPASDMENITLHQGDCSDLTTF--- 145 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTT------------CCCEEEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGG---
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcC------------CCCEEEEEeCChHHHHHHhccCCceEEEECcchhHHHH---
Confidence 4679999999999999999987 33 35799999999853 1 25799999999985221
Q ss_pred HhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHH-cccCCcEEEEEE
Q 021161 112 IRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTH-VLKEGGKFIAKI 167 (316)
Q Consensus 112 ~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~-vLkpGG~fV~Ki 167 (316)
..+.+.+||+|++|++ |. + ...++..+.+ +|||||.|++..
T Consensus 146 -~~~~~~~fD~I~~d~~------~~-~-------~~~~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 146 -EHLREMAHPLIFIDNA------HA-N-------TFNIMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp -GGGSSSCSSEEEEESS------CS-S-------HHHHHHHHHHHTCCTTCEEEECS
T ss_pred -HhhccCCCCEEEECCc------hH-h-------HHHHHHHHHHhhCCCCCEEEEEe
Confidence 1233447999999875 21 1 1345777786 999999999953
No 64
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.11 E-value=2.9e-10 Score=95.90 Aligned_cols=109 Identities=16% Similarity=0.147 Sum_probs=79.6
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCC-CcEEEecCccChhh
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITNART 107 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~-gV~~i~gDIt~~~t 107 (316)
.++.+|||+|||+|.++..++++.+ ..+|+++|+++.+ .++ ++ ++++|..+.-
T Consensus 24 ~~~~~vldiG~G~G~~~~~l~~~~~-------------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~- 88 (178)
T 3hm2_A 24 KPHETLWDIGGGSGSIAIEWLRSTP-------------QTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAF- 88 (178)
T ss_dssp CTTEEEEEESTTTTHHHHHHHTTSS-------------SEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGG-
T ss_pred cCCCeEEEeCCCCCHHHHHHHHHCC-------------CCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhh-
Confidence 5778999999999999999988753 4799999999831 234 67 8889886521
Q ss_pred HHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCCCHHHHHHHHHhcC
Q 021161 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFF 184 (316)
Q Consensus 108 ~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~~~~~l~~~l~~~F 184 (316)
. ...++||+|++++.... ...+..+.++|+|||.+++..+...+...+...++...
T Consensus 89 -----~-~~~~~~D~i~~~~~~~~---------------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~ 144 (178)
T 3hm2_A 89 -----D-DVPDNPDVIFIGGGLTA---------------PGVFAAAWKRLPVGGRLVANAVTVESEQMLWALRKQFG 144 (178)
T ss_dssp -----G-GCCSCCSEEEECC-TTC---------------TTHHHHHHHTCCTTCEEEEEECSHHHHHHHHHHHHHHC
T ss_pred -----h-ccCCCCCEEEECCcccH---------------HHHHHHHHHhcCCCCEEEEEeeccccHHHHHHHHHHcC
Confidence 1 11268999999864321 23467888999999999998776555566666666553
No 65
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.11 E-value=1.9e-10 Score=105.01 Aligned_cols=116 Identities=10% Similarity=0.025 Sum_probs=80.6
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC--------C--------------------
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------P-------------------- 91 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~--------~-------------------- 91 (316)
.++.+|||+|||+|..+..|+++. ..|+|||+++.+ .
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~G---------------~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADRG---------------HTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSS 131 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHTT---------------CEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEET
T ss_pred CCCCeEEEeCCCCcHHHHHHHHCC---------------CeEEEEECCHHHHHHHHHhcccccccccccccccccccccC
Confidence 477899999999999999998752 589999999831 1
Q ss_pred CCCcEEEecCccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEcc--
Q 021161 92 IEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR-- 169 (316)
Q Consensus 92 i~gV~~i~gDIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~-- 169 (316)
..+|+++++|+++... ...++||+|++.++.... +..+ ....+..+.++|||||.|++-++.
T Consensus 132 ~~~i~~~~~D~~~l~~-------~~~~~FD~V~~~~~l~~l--~~~~-------~~~~l~~~~~~LkpGG~l~l~~~~~~ 195 (252)
T 2gb4_A 132 SGSISLYCCSIFDLPR-------ANIGKFDRIWDRGALVAI--NPGD-------HDRYADIILSLLRKEFQYLVAVLSYD 195 (252)
T ss_dssp TSSEEEEESCTTTGGG-------GCCCCEEEEEESSSTTTS--CGGG-------HHHHHHHHHHTEEEEEEEEEEEEECC
T ss_pred CCceEEEECccccCCc-------ccCCCEEEEEEhhhhhhC--CHHH-------HHHHHHHHHHHcCCCeEEEEEEEecC
Confidence 1468999999998641 112689999998754321 1111 235678889999999999643321
Q ss_pred -----C----CCHHHHHHHHHhcCCc
Q 021161 170 -----G----KDTSLLYCQLKLFFPV 186 (316)
Q Consensus 170 -----~----~~~~~l~~~l~~~F~~ 186 (316)
+ ....++...+...|+-
T Consensus 196 ~~~~~g~~~~~~~~el~~~l~~~f~v 221 (252)
T 2gb4_A 196 PTKHAGPPFYVPSAELKRLFGTKCSM 221 (252)
T ss_dssp TTSCCCSSCCCCHHHHHHHHTTTEEE
T ss_pred CccCCCCCCCCCHHHHHHHhhCCeEE
Confidence 1 1345666666654543
No 66
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.11 E-value=2.9e-10 Score=106.85 Aligned_cols=119 Identities=15% Similarity=0.202 Sum_probs=82.9
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCCcEEEecCccChhh
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNART 107 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~gV~~i~gDIt~~~t 107 (316)
++++.+|||+|||||+++..+..+.. +++|+|||+++.+ .+.+|++++||+.+..
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~~-------------ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~- 185 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHVY-------------GMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID- 185 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHTT-------------CCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG-
T ss_pred CCCcCEEEEECCCccHHHHHHHHHcc-------------CCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC-
Confidence 47899999999999999977665542 4799999999832 2467999999998742
Q ss_pred HHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCCCH---HHHHHHHHhcC
Q 021161 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDT---SLLYCQLKLFF 184 (316)
Q Consensus 108 ~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~~~---~~l~~~l~~~F 184 (316)
.++||+|++++. .. + ...++..+.++|||||.|++....+... ..+......-|
T Consensus 186 ---------d~~FDvV~~~a~-----~~--d-------~~~~l~el~r~LkPGG~Lvv~~~~~~r~~l~~~v~~~~~~gf 242 (298)
T 3fpf_A 186 ---------GLEFDVLMVAAL-----AE--P-------KRRVFRNIHRYVDTETRIIYRTYTGMRAILYAPVSDDDITGF 242 (298)
T ss_dssp ---------GCCCSEEEECTT-----CS--C-------HHHHHHHHHHHCCTTCEEEEEECCGGGGGSSCCCCTGGGTTE
T ss_pred ---------CCCcCEEEECCC-----cc--C-------HHHHHHHHHHHcCCCcEEEEEcCcchhhhccccCChhhhhhh
Confidence 468999998753 11 2 1356888999999999999876432100 00001122347
Q ss_pred CceEEecCCC
Q 021161 185 PVVTFAKPKS 194 (316)
Q Consensus 185 ~~V~~~KP~s 194 (316)
+......|..
T Consensus 243 ~~~~~~~p~~ 252 (298)
T 3fpf_A 243 RRAGVVLPSG 252 (298)
T ss_dssp EEEEEECCCT
T ss_pred hheeEECCCC
Confidence 7777777754
No 67
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.11 E-value=8.4e-10 Score=97.52 Aligned_cols=103 Identities=21% Similarity=0.177 Sum_probs=77.7
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC---------CCCCcEEEecCccChhhHH
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAE 109 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~---------~i~gV~~i~gDIt~~~t~~ 109 (316)
..++.+|||+|||+|.++..++++.+ ..+|+++|+++.+ ...++.++++|+.+..
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~~-------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~--- 105 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKYP-------------EATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYD--- 105 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHCT-------------TCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCC---
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCC-------------CCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccC---
Confidence 45779999999999999999998863 4799999998831 2237999999998853
Q ss_pred HHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCCC
Q 021161 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKD 172 (316)
Q Consensus 110 ~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~~ 172 (316)
+. ++||+|+|.... +.++.. -...++..+.++|||||.|++..+....
T Consensus 106 -----~~-~~fD~v~~~~~l-----~~~~~~----~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 153 (234)
T 3dtn_A 106 -----FE-EKYDMVVSALSI-----HHLEDE----DKKELYKRSYSILKESGIFINADLVHGE 153 (234)
T ss_dssp -----CC-SCEEEEEEESCG-----GGSCHH----HHHHHHHHHHHHEEEEEEEEEEEECBCS
T ss_pred -----CC-CCceEEEEeCcc-----ccCCHH----HHHHHHHHHHHhcCCCcEEEEEEecCCC
Confidence 33 689999998532 222221 1135678889999999999987765443
No 68
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.11 E-value=2.3e-10 Score=99.46 Aligned_cols=109 Identities=17% Similarity=0.067 Sum_probs=81.3
Q ss_pred HHhhhHHcCCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-------CCCCcEEEecC
Q 021161 29 LLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-------PIEGVIQVQGD 101 (316)
Q Consensus 29 L~qId~~f~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-------~i~gV~~i~gD 101 (316)
+..+.+.+.-+.++.+|||+|||+|.++..++++ + .+|+++|+++.+ ..++++++++|
T Consensus 34 ~~~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~-~--------------~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d 98 (218)
T 3ou2_A 34 APAALERLRAGNIRGDVLELASGTGYWTRHLSGL-A--------------DRVTALDGSAEMIAEAGRHGLDNVEFRQQD 98 (218)
T ss_dssp HHHHHHHHTTTTSCSEEEEESCTTSHHHHHHHHH-S--------------SEEEEEESCHHHHHHHGGGCCTTEEEEECC
T ss_pred HHHHHHHHhcCCCCCeEEEECCCCCHHHHHHHhc-C--------------CeEEEEeCCHHHHHHHHhcCCCCeEEEecc
Confidence 3344445554667789999999999999999887 2 589999999831 24679999999
Q ss_pred ccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccC
Q 021161 102 ITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG 170 (316)
Q Consensus 102 It~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~ 170 (316)
+.+. +..++||+|+|.... +.... .....++..+.++|+|||.|++..+..
T Consensus 99 ~~~~---------~~~~~~D~v~~~~~l-----~~~~~----~~~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 99 LFDW---------TPDRQWDAVFFAHWL-----AHVPD----DRFEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp TTSC---------CCSSCEEEEEEESCG-----GGSCH----HHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred cccC---------CCCCceeEEEEechh-----hcCCH----HHHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 9874 346799999997532 22222 123466788899999999999977654
No 69
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.10 E-value=3.8e-10 Score=99.92 Aligned_cols=97 Identities=19% Similarity=0.237 Sum_probs=75.5
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC--------CCCCcEEEecCccChhhHHH
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------PIEGVIQVQGDITNARTAEV 110 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~--------~i~gV~~i~gDIt~~~t~~~ 110 (316)
+.++.+|||+|||+|.++..++++. .+|+|+|+++.+ ...+++++++|+.+.+
T Consensus 51 ~~~~~~vLDiG~G~G~~~~~l~~~~---------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~---- 111 (242)
T 3l8d_A 51 VKKEAEVLDVGCGDGYGTYKLSRTG---------------YKAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLP---- 111 (242)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHTT---------------CEEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCS----
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHcC---------------CeEEEEECCHHHHHHHHhhcccCCceEEEcchhcCC----
Confidence 4678899999999999999998852 589999999831 2467999999998753
Q ss_pred HHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEcc
Q 021161 111 VIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (316)
Q Consensus 111 I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~ 169 (316)
+..++||+|+|...... ..+. ..++..+.++|+|||.|++..+.
T Consensus 112 ----~~~~~fD~v~~~~~l~~----~~~~-------~~~l~~~~~~L~pgG~l~i~~~~ 155 (242)
T 3l8d_A 112 ----FENEQFEAIMAINSLEW----TEEP-------LRALNEIKRVLKSDGYACIAILG 155 (242)
T ss_dssp ----SCTTCEEEEEEESCTTS----SSCH-------HHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ----CCCCCccEEEEcChHhh----ccCH-------HHHHHHHHHHhCCCeEEEEEEcC
Confidence 44679999999764321 1221 35678889999999999997754
No 70
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.09 E-value=2.1e-10 Score=100.01 Aligned_cols=144 Identities=14% Similarity=0.067 Sum_probs=97.8
Q ss_pred CCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----CCCCcEEEecCccChhhHHHH
Q 021161 37 NIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----PIEGVIQVQGDITNARTAEVV 111 (316)
Q Consensus 37 ~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----~i~gV~~i~gDIt~~~t~~~I 111 (316)
..+.++.+|||+|||+|.++..++++. .+|+++|+++.+ ...++.++++|+.+..
T Consensus 39 ~~~~~~~~vLDiGcG~G~~~~~l~~~~---------------~~v~~vD~s~~~~~~a~~~~~~~~~~~d~~~~~----- 98 (211)
T 3e23_A 39 GELPAGAKILELGCGAGYQAEAMLAAG---------------FDVDATDGSPELAAEASRRLGRPVRTMLFHQLD----- 98 (211)
T ss_dssp TTSCTTCEEEESSCTTSHHHHHHHHTT---------------CEEEEEESCHHHHHHHHHHHTSCCEECCGGGCC-----
T ss_pred HhcCCCCcEEEECCCCCHHHHHHHHcC---------------CeEEEECCCHHHHHHHHHhcCCceEEeeeccCC-----
Confidence 345678999999999999999998752 589999999842 1126778889988753
Q ss_pred HhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCC--------------CHHHHH
Q 021161 112 IRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK--------------DTSLLY 177 (316)
Q Consensus 112 ~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~--------------~~~~l~ 177 (316)
..++||+|+|..... .... .-...+|..+.++|||||.|++.+.... +...+.
T Consensus 99 ----~~~~fD~v~~~~~l~-----~~~~----~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (211)
T 3e23_A 99 ----AIDAYDAVWAHACLL-----HVPR----DELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLR 165 (211)
T ss_dssp ----CCSCEEEEEECSCGG-----GSCH----HHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHH
T ss_pred ----CCCcEEEEEecCchh-----hcCH----HHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHH
Confidence 357899999976432 1221 1124567888999999999999765432 556777
Q ss_pred HHHHhc--CCceEEecCCCC-CCCCcceEEEEecccCCC
Q 021161 178 CQLKLF--FPVVTFAKPKSS-RNSSIEAFAVCENYFPPE 213 (316)
Q Consensus 178 ~~l~~~--F~~V~~~KP~sS-R~~S~E~fvVc~gf~~p~ 213 (316)
..++.. |+.+.+..-... -....+.++.+..-+++.
T Consensus 166 ~~l~~aG~f~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~ 204 (211)
T 3e23_A 166 ARYAEAGTWASVAVESSEGKGFDQELAQFLHVSVRKPEL 204 (211)
T ss_dssp HHHHHHCCCSEEEEEEEEEECTTSCEEEEEEEEEECCCC
T ss_pred HHHHhCCCcEEEEEEeccCCCCCCCCceEEEEEEecCcc
Confidence 777764 887776542222 223344565555555443
No 71
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.09 E-value=2.5e-10 Score=99.10 Aligned_cols=109 Identities=17% Similarity=0.091 Sum_probs=78.0
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCCcEEEecCccChhhHH
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTAE 109 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~gV~~i~gDIt~~~t~~ 109 (316)
++.+|||+|||+|.++..+++..+ ..+|+++|+++.+ .+.+++++++|+.+..
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~-------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--- 128 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRP-------------EAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP--- 128 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCT-------------TSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC---
T ss_pred CCCeEEEECCCCCHHHHHHHHHCC-------------CCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC---
Confidence 478999999999999999998763 4799999999832 2456899999998742
Q ss_pred HHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCCCHHHHHHHHHhcCCceE
Q 021161 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFFPVVT 188 (316)
Q Consensus 110 ~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~~~~~l~~~l~~~F~~V~ 188 (316)
..++||+|+|++. ++ ....+..+.++|+|||.|++.. .......+...+. -|+.+.
T Consensus 129 ------~~~~~D~i~~~~~------~~---------~~~~l~~~~~~L~~gG~l~~~~-~~~~~~~~~~~~~-g~~~~~ 184 (207)
T 1jsx_A 129 ------SEPPFDGVISRAF------AS---------LNDMVSWCHHLPGEQGRFYALK-GQMPEDEIALLPE-EYQVES 184 (207)
T ss_dssp ------CCSCEEEEECSCS------SS---------HHHHHHHHTTSEEEEEEEEEEE-SSCCHHHHHTSCT-TEEEEE
T ss_pred ------ccCCcCEEEEecc------CC---------HHHHHHHHHHhcCCCcEEEEEe-CCCchHHHHHHhc-CCceee
Confidence 2368999998742 11 1356788899999999999853 2333444433333 344443
No 72
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.09 E-value=5e-10 Score=100.37 Aligned_cols=94 Identities=14% Similarity=0.085 Sum_probs=70.4
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCCcEEEecCccChhhH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~gV~~i~gDIt~~~t~ 108 (316)
.++.+|||+|||+|.++..+++.. +..+|+|||+++.+ .+.+|+++++|+.+....
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~-------------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~ 135 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICF-------------PHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQR 135 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHC-------------TTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTC
T ss_pred CCCCEEEEecCCCCHHHHHHHHhC-------------CCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhccc
Confidence 467899999999999999998754 24799999999831 246799999998753200
Q ss_pred HHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEE
Q 021161 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (316)
Q Consensus 109 ~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~K 166 (316)
....++||+|+|++. .+ ....+..+.++|+|||.|++-
T Consensus 136 -----~~~~~~fD~V~~~~~------~~---------~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 136 -----KDVRESYDIVTARAV------AR---------LSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp -----TTTTTCEEEEEEECC------SC---------HHHHHHHHGGGEEEEEEEEEE
T ss_pred -----ccccCCccEEEEecc------CC---------HHHHHHHHHHhcCCCCEEEEE
Confidence 001368999999762 11 235678889999999999873
No 73
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.09 E-value=1.4e-09 Score=97.19 Aligned_cols=104 Identities=18% Similarity=0.229 Sum_probs=77.9
Q ss_pred HHhhhHHcCCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CC-CCcE
Q 021161 29 LLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVI 96 (316)
Q Consensus 29 L~qId~~f~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i-~gV~ 96 (316)
+..+.+... +.++.+|||+|||+|.++..++++.+ .+|+|+|+++.+ .+ .++.
T Consensus 25 ~~~l~~~~~-~~~~~~VLDiGcG~G~~~~~la~~~~--------------~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~ 89 (256)
T 1nkv_A 25 YATLGRVLR-MKPGTRILDLGSGSGEMLCTWARDHG--------------ITGTGIDMSSLFTAQAKRRAEELGVSERVH 89 (256)
T ss_dssp HHHHHHHTC-CCTTCEEEEETCTTCHHHHHHHHHTC--------------CEEEEEESCHHHHHHHHHHHHHTTCTTTEE
T ss_pred HHHHHHhcC-CCCCCEEEEECCCCCHHHHHHHHhcC--------------CeEEEEeCCHHHHHHHHHHHHhcCCCcceE
Confidence 344444444 46789999999999999999998763 689999999831 12 3699
Q ss_pred EEecCccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEE
Q 021161 97 QVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (316)
Q Consensus 97 ~i~gDIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Ki 167 (316)
++++|+.+.. + .++||+|+|.+..... .+ ...+|..+.++|||||.|++..
T Consensus 90 ~~~~d~~~~~--------~-~~~fD~V~~~~~~~~~----~~-------~~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 90 FIHNDAAGYV--------A-NEKCDVAACVGATWIA----GG-------FAGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp EEESCCTTCC--------C-SSCEEEEEEESCGGGT----SS-------SHHHHHHHTTSEEEEEEEEEEE
T ss_pred EEECChHhCC--------c-CCCCCEEEECCChHhc----CC-------HHHHHHHHHHHcCCCeEEEEec
Confidence 9999998753 3 4789999997643211 11 1456888999999999999864
No 74
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.09 E-value=2e-10 Score=99.93 Aligned_cols=114 Identities=15% Similarity=0.096 Sum_probs=85.7
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCCcEEEecCccChhh
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNART 107 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~gV~~i~gDIt~~~t 107 (316)
+.++.+|||+|||+|.++..+++. + ..+|+|+|+++.+ .+.++.++++|+.+.
T Consensus 58 ~~~~~~vLDiG~G~G~~~~~l~~~-~-------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~-- 121 (205)
T 3grz_A 58 MVKPLTVADVGTGSGILAIAAHKL-G-------------AKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLAD-- 121 (205)
T ss_dssp CSSCCEEEEETCTTSHHHHHHHHT-T-------------CSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTT--
T ss_pred ccCCCEEEEECCCCCHHHHHHHHC-C-------------CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEecccccc--
Confidence 467899999999999999998864 2 3699999999832 244589999999763
Q ss_pred HHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCCCHHHHHHHHHhc-CCc
Q 021161 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLF-FPV 186 (316)
Q Consensus 108 ~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~~~~~l~~~l~~~-F~~ 186 (316)
..++||+|+++... +.+...+..+.++|+|||.+++..+.......+...++.. |+.
T Consensus 122 --------~~~~fD~i~~~~~~--------------~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~Gf~~ 179 (205)
T 3grz_A 122 --------VDGKFDLIVANILA--------------EILLDLIPQLDSHLNEDGQVIFSGIDYLQLPKIEQALAENSFQI 179 (205)
T ss_dssp --------CCSCEEEEEEESCH--------------HHHHHHGGGSGGGEEEEEEEEEEEEEGGGHHHHHHHHHHTTEEE
T ss_pred --------CCCCceEEEECCcH--------------HHHHHHHHHHHHhcCCCCEEEEEecCcccHHHHHHHHHHcCCce
Confidence 24689999998532 1124667888999999999999766666667777766654 655
Q ss_pred eEEe
Q 021161 187 VTFA 190 (316)
Q Consensus 187 V~~~ 190 (316)
+.+.
T Consensus 180 ~~~~ 183 (205)
T 3grz_A 180 DLKM 183 (205)
T ss_dssp EEEE
T ss_pred EEee
Confidence 5543
No 75
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.09 E-value=2.6e-10 Score=103.43 Aligned_cols=109 Identities=18% Similarity=0.191 Sum_probs=81.8
Q ss_pred hhHHhhhHHcCCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCCc
Q 021161 27 FKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGV 95 (316)
Q Consensus 27 ~KL~qId~~f~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~gV 95 (316)
-.+.++......+.++.+|||+|||+|.|+..++++.+ ..+|+++|+++.. .++++
T Consensus 23 ~~l~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~-------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~ 89 (276)
T 3mgg_A 23 ETLEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNP-------------DAEITSIDISPESLEKARENTEKNGIKNV 89 (276)
T ss_dssp CHHHHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCT-------------TSEEEEEESCHHHHHHHHHHHHHTTCCSE
T ss_pred HHHHHHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCC-------------CCEEEEEECCHHHHHHHHHHHHHcCCCCc
Confidence 34445545555567899999999999999999998852 4799999999731 24679
Q ss_pred EEEecCccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEE
Q 021161 96 IQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (316)
Q Consensus 96 ~~i~gDIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Ki 167 (316)
.++++|+.+.. +..++||+|+|...... -.+. ..++..+.++|||||.|++..
T Consensus 90 ~~~~~d~~~~~--------~~~~~fD~v~~~~~l~~----~~~~-------~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 90 KFLQANIFSLP--------FEDSSFDHIFVCFVLEH----LQSP-------EEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp EEEECCGGGCC--------SCTTCEEEEEEESCGGG----CSCH-------HHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEcccccCC--------CCCCCeeEEEEechhhh----cCCH-------HHHHHHHHHHcCCCcEEEEEE
Confidence 99999998753 44578999999864321 1121 256788899999999999864
No 76
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.09 E-value=3.9e-10 Score=101.56 Aligned_cols=96 Identities=24% Similarity=0.301 Sum_probs=73.5
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCCcEEEecCccChhhH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~gV~~i~gDIt~~~t~ 108 (316)
.++.+|||+|||+|.++..++++. .+|+++|+++.+ .++++.++++|+.+.+
T Consensus 36 ~~~~~vLDiGcG~G~~~~~l~~~~---------------~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~-- 98 (260)
T 1vl5_A 36 KGNEEVLDVATGGGHVANAFAPFV---------------KKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP-- 98 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHGGGS---------------SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC--
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhC---------------CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCC--
Confidence 577899999999999999988764 489999999831 2467999999998753
Q ss_pred HHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEcc
Q 021161 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (316)
Q Consensus 109 ~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~ 169 (316)
+..++||+|+|..... |-.|. ..+|..+.++|||||.|++..+.
T Consensus 99 ------~~~~~fD~V~~~~~l~----~~~d~-------~~~l~~~~r~LkpgG~l~~~~~~ 142 (260)
T 1vl5_A 99 ------FTDERFHIVTCRIAAH----HFPNP-------ASFVSEAYRVLKKGGQLLLVDNS 142 (260)
T ss_dssp ------SCTTCEEEEEEESCGG----GCSCH-------HHHHHHHHHHEEEEEEEEEEEEE
T ss_pred ------CCCCCEEEEEEhhhhH----hcCCH-------HHHHHHHHHHcCCCCEEEEEEcC
Confidence 4567899999986432 11221 35688899999999999986543
No 77
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.09 E-value=2.8e-10 Score=100.36 Aligned_cols=100 Identities=17% Similarity=0.194 Sum_probs=74.6
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC------CCC-CcEEEecCccChhhHHHHH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIE-GVIQVQGDITNARTAEVVI 112 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~------~i~-gV~~i~gDIt~~~t~~~I~ 112 (316)
.++.+|||+|||+|.++..++++. .+|+|+|+++.+ ... +++++++|+.+.
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~---------------~~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~------- 98 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHF---------------NDITCVEASEEAISHAQGRLKDGITYIHSRFEDA------- 98 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTC---------------SCEEEEESCHHHHHHHHHHSCSCEEEEESCGGGC-------
T ss_pred cCCCcEEEECCCCCHHHHHHHHhC---------------CcEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHc-------
Confidence 367799999999999999887643 479999999842 122 899999999864
Q ss_pred hhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHH-HcccCCcEEEEEEccCCCHH
Q 021161 113 RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVT-HVLKEGGKFIAKIFRGKDTS 174 (316)
Q Consensus 113 ~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~-~vLkpGG~fV~Kif~~~~~~ 174 (316)
+..++||+|+|...... -.+. ..+|..+. ++|||||.|++.+.......
T Consensus 99 --~~~~~fD~v~~~~~l~~----~~~~-------~~~l~~~~~~~LkpgG~l~i~~~~~~~~~ 148 (250)
T 2p7i_A 99 --QLPRRYDNIVLTHVLEH----IDDP-------VALLKRINDDWLAEGGRLFLVCPNANAVS 148 (250)
T ss_dssp --CCSSCEEEEEEESCGGG----CSSH-------HHHHHHHHHTTEEEEEEEEEEEECTTCHH
T ss_pred --CcCCcccEEEEhhHHHh----hcCH-------HHHHHHHHHHhcCCCCEEEEEcCChHHHH
Confidence 24578999999764321 1121 35678889 99999999999876554443
No 78
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.09 E-value=4.7e-11 Score=108.92 Aligned_cols=102 Identities=16% Similarity=0.111 Sum_probs=74.8
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CC-CCcEEEecCccChh
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNAR 106 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i-~gV~~i~gDIt~~~ 106 (316)
+.++.+|||+|||+|.++..+++.. ..+|+|+|+++.+ .. .++.++++|+.+..
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~--------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 127 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERAG--------------IGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRH 127 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHHT--------------CSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSC
T ss_pred CCCCCeEEEECCCCCHHHHHHHHCC--------------CCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccc
Confidence 4688999999999999999988753 2589999999732 11 35789999998753
Q ss_pred hHHHHHhhc-CCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEcc
Q 021161 107 TAEVVIRHF-DGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (316)
Q Consensus 107 t~~~I~~~~-~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~ 169 (316)
+ ..++||+|+|....... . .. ..-...+|..+.++|||||.|++.+..
T Consensus 128 --------~~~~~~fD~v~~~~~l~~~-~--~~----~~~~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 128 --------MDLGKEFDVISSQFSFHYA-F--ST----SESLDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp --------CCCSSCEEEEEEESCGGGG-G--SS----HHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred --------cCCCCCcCEEEECchhhhh-c--CC----HHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 3 35789999998643210 0 01 112356788899999999999997754
No 79
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.08 E-value=3.2e-10 Score=99.63 Aligned_cols=129 Identities=11% Similarity=0.032 Sum_probs=83.8
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCCcEEEecCccChhhH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~gV~~i~gDIt~~~t~ 108 (316)
.++.+|||||||+|.++..++++.+ +.+|+|||+++.+ .+.++.++++|+.+..
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p-------------~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~-- 104 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNP-------------DINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLT-- 104 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCT-------------TSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGG--
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCC-------------CCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHH--
Confidence 4678999999999999999998863 5799999999832 2468999999998743
Q ss_pred HHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCCCHHHHHHHHHhc-CCce
Q 021161 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLF-FPVV 187 (316)
Q Consensus 109 ~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~~~~~l~~~l~~~-F~~V 187 (316)
+.+..++||+|+++.. +.- .. ..+....-.....+..+.++|+|||.|++.+-.......+...+... |..+
T Consensus 105 ----~~~~~~~~D~i~~~~~-~~~-~~-~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~ 177 (214)
T 1yzh_A 105 ----DYFEDGEIDRLYLNFS-DPW-PK-KRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRGLFEYSLVSFSQYGMKLN 177 (214)
T ss_dssp ----GTSCTTCCSEEEEESC-CCC-CS-GGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHHTCEEE
T ss_pred ----hhcCCCCCCEEEEECC-CCc-cc-cchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHCCCeee
Confidence 2245578999999853 210 00 00000000123567888999999999999753211123344444432 5444
Q ss_pred EEe
Q 021161 188 TFA 190 (316)
Q Consensus 188 ~~~ 190 (316)
.+.
T Consensus 178 ~~~ 180 (214)
T 1yzh_A 178 GVW 180 (214)
T ss_dssp EEE
T ss_pred ecc
Confidence 443
No 80
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.08 E-value=4.9e-10 Score=97.87 Aligned_cols=120 Identities=17% Similarity=0.159 Sum_probs=83.4
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC---------CCCCcEEEecCccChhhHH
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAE 109 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~---------~i~gV~~i~gDIt~~~t~~ 109 (316)
..++.+|||+|||+|.++..++++. .+|+|+|+++.+ ...+++++++|+.+..
T Consensus 49 ~~~~~~vLDiGcG~G~~~~~l~~~~---------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~--- 110 (216)
T 3ofk_A 49 SGAVSNGLEIGCAAGAFTEKLAPHC---------------KRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFS--- 110 (216)
T ss_dssp TSSEEEEEEECCTTSHHHHHHGGGE---------------EEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCC---
T ss_pred cCCCCcEEEEcCCCCHHHHHHHHcC---------------CEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCC---
Confidence 3567899999999999999998753 489999999831 2347899999998753
Q ss_pred HHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccC---------CCHHHHHHHH
Q 021161 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG---------KDTSLLYCQL 180 (316)
Q Consensus 110 ~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~---------~~~~~l~~~l 180 (316)
..++||+|+|..... |-.+. .....++..+.++|||||.|++.+... .....+...+
T Consensus 111 ------~~~~fD~v~~~~~l~----~~~~~----~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (216)
T 3ofk_A 111 ------TAELFDLIVVAEVLY----YLEDM----TQMRTAIDNMVKMLAPGGHLVFGSARDATCRRWGHVAGAETVITIL 176 (216)
T ss_dssp ------CSCCEEEEEEESCGG----GSSSH----HHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHTTCSCCHHHHHHHH
T ss_pred ------CCCCccEEEEccHHH----hCCCH----HHHHHHHHHHHHHcCCCCEEEEEecCCCcchhhhhhhhHHHHHHHH
Confidence 347899999975432 11121 123466888999999999999865321 2334455555
Q ss_pred HhcCCceEEe
Q 021161 181 KLFFPVVTFA 190 (316)
Q Consensus 181 ~~~F~~V~~~ 190 (316)
...+..+...
T Consensus 177 ~~~~~~~e~~ 186 (216)
T 3ofk_A 177 TEALTEVERV 186 (216)
T ss_dssp HHHSEEEEEE
T ss_pred HhhccceEEE
Confidence 5555554433
No 81
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.07 E-value=3.7e-10 Score=98.79 Aligned_cols=97 Identities=14% Similarity=0.167 Sum_probs=73.7
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC------CC-CCcEEEecCccChhhHHHHH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PI-EGVIQVQGDITNARTAEVVI 112 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~------~i-~gV~~i~gDIt~~~t~~~I~ 112 (316)
.++.+|||+|||+|.++..++++. .+|+|+|+++.+ .. .++.++++|+.+..
T Consensus 44 ~~~~~vLDiGcG~G~~~~~l~~~~---------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~------ 102 (220)
T 3hnr_A 44 KSFGNVLEFGVGTGNLTNKLLLAG---------------RTVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFE------ 102 (220)
T ss_dssp TCCSEEEEECCTTSHHHHHHHHTT---------------CEEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCC------
T ss_pred cCCCeEEEeCCCCCHHHHHHHhCC---------------CeEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcC------
Confidence 477899999999999999998752 689999999832 13 38999999999853
Q ss_pred hhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEcc
Q 021161 113 RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (316)
Q Consensus 113 ~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~ 169 (316)
+. ++||+|+|.... +...... ...+|..+.++|||||.+++....
T Consensus 103 --~~-~~fD~v~~~~~l-----~~~~~~~----~~~~l~~~~~~LkpgG~l~i~~~~ 147 (220)
T 3hnr_A 103 --VP-TSIDTIVSTYAF-----HHLTDDE----KNVAIAKYSQLLNKGGKIVFADTI 147 (220)
T ss_dssp --CC-SCCSEEEEESCG-----GGSCHHH----HHHHHHHHHHHSCTTCEEEEEEEC
T ss_pred --CC-CCeEEEEECcch-----hcCChHH----HHHHHHHHHHhcCCCCEEEEEecc
Confidence 33 789999998643 2222211 134678889999999999997643
No 82
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.06 E-value=2.8e-10 Score=104.99 Aligned_cols=113 Identities=15% Similarity=0.145 Sum_probs=79.7
Q ss_pred hHHhhhHHcCCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-------------CCCC
Q 021161 28 KLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-------------PIEG 94 (316)
Q Consensus 28 KL~qId~~f~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-------------~i~g 94 (316)
.+.++...+.. .++.+|||+|||+|.++..+++++. ...+|+|+|+++.+ ..++
T Consensus 24 ~~~~~l~~~~~-~~~~~vLDiGcG~G~~~~~la~~~~------------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~ 90 (299)
T 3g5t_A 24 DFYKMIDEYHD-GERKLLVDVGCGPGTATLQMAQELK------------PFEQIIGSDLSATMIKTAEVIKEGSPDTYKN 90 (299)
T ss_dssp HHHHHHHHHCC-SCCSEEEEETCTTTHHHHHHHHHSS------------CCSEEEEEESCHHHHHHHHHHHHHCC-CCTT
T ss_pred HHHHHHHHHhc-CCCCEEEEECCCCCHHHHHHHHhCC------------CCCEEEEEeCCHHHHHHHHHHHHhccCCCCc
Confidence 34444444432 5789999999999999999998762 35799999999832 1468
Q ss_pred cEEEecCccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEE
Q 021161 95 VIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (316)
Q Consensus 95 V~~i~gDIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Ki 167 (316)
++++++|+.+..... ...+..++||+|+|..... ..+ ...++..+.++|||||.|++-.
T Consensus 91 v~~~~~d~~~~~~~~--~~~~~~~~fD~V~~~~~l~-----~~~-------~~~~l~~~~~~LkpgG~l~i~~ 149 (299)
T 3g5t_A 91 VSFKISSSDDFKFLG--ADSVDKQKIDMITAVECAH-----WFD-------FEKFQRSAYANLRKDGTIAIWG 149 (299)
T ss_dssp EEEEECCTTCCGGGC--TTTTTSSCEEEEEEESCGG-----GSC-------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEEcCHHhCCccc--cccccCCCeeEEeHhhHHH-----HhC-------HHHHHHHHHHhcCCCcEEEEEe
Confidence 999999999864110 0001126899999986432 122 2356788899999999999843
No 83
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.06 E-value=7.3e-10 Score=103.08 Aligned_cols=101 Identities=14% Similarity=0.155 Sum_probs=77.6
Q ss_pred HHcCCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CC-CCcEEEecC
Q 021161 34 EEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGD 101 (316)
Q Consensus 34 ~~f~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i-~gV~~i~gD 101 (316)
+...-+.++.+|||+|||+|.++..++++.+ .+|+|+|+++.+ .+ .+++++++|
T Consensus 110 ~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~--------------~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d 175 (312)
T 3vc1_A 110 DHLGQAGPDDTLVDAGCGRGGSMVMAHRRFG--------------SRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCN 175 (312)
T ss_dssp TTSCCCCTTCEEEEESCTTSHHHHHHHHHHC--------------CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECC
T ss_pred HHhccCCCCCEEEEecCCCCHHHHHHHHHcC--------------CEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECC
Confidence 3333346789999999999999999998863 689999999842 13 369999999
Q ss_pred ccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEc
Q 021161 102 ITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (316)
Q Consensus 102 It~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif 168 (316)
+.+.+ +..++||+|+|..... ..+ ...+|..+.++|||||.|++..+
T Consensus 176 ~~~~~--------~~~~~fD~V~~~~~l~-----~~~-------~~~~l~~~~~~LkpgG~l~~~~~ 222 (312)
T 3vc1_A 176 MLDTP--------FDKGAVTASWNNESTM-----YVD-------LHDLFSEHSRFLKVGGRYVTITG 222 (312)
T ss_dssp TTSCC--------CCTTCEEEEEEESCGG-----GSC-------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhcCC--------CCCCCEeEEEECCchh-----hCC-------HHHHHHHHHHHcCCCcEEEEEEc
Confidence 98753 4557999999975432 122 24668889999999999998764
No 84
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.05 E-value=3.8e-10 Score=103.61 Aligned_cols=98 Identities=21% Similarity=0.149 Sum_probs=74.5
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC---------C-CCCcEEEecCccChhhH
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------P-IEGVIQVQGDITNARTA 108 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~---------~-i~gV~~i~gDIt~~~t~ 108 (316)
+.++.+|||+|||+|.|+..+++.++ .+.+|+|+|+++.+ . -.+++++++|+.+..
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~l~~~~~------------~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~-- 85 (284)
T 3gu3_A 20 ITKPVHIVDYGCGYGYLGLVLMPLLP------------EGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIE-- 85 (284)
T ss_dssp CCSCCEEEEETCTTTHHHHHHTTTSC------------TTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCC--
T ss_pred cCCCCeEEEecCCCCHHHHHHHHhCC------------CCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcC--
Confidence 46788999999999999999988763 24799999999842 1 127899999999753
Q ss_pred HHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEc
Q 021161 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (316)
Q Consensus 109 ~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif 168 (316)
+ .++||+|+|...... -.+. ..++..+.++|||||.|++...
T Consensus 86 ------~-~~~fD~v~~~~~l~~----~~~~-------~~~l~~~~~~LkpgG~l~~~~~ 127 (284)
T 3gu3_A 86 ------L-NDKYDIAICHAFLLH----MTTP-------ETMLQKMIHSVKKGGKIICFEP 127 (284)
T ss_dssp ------C-SSCEEEEEEESCGGG----CSSH-------HHHHHHHHHTEEEEEEEEEEEC
T ss_pred ------c-CCCeeEEEECChhhc----CCCH-------HHHHHHHHHHcCCCCEEEEEec
Confidence 3 358999999864321 1121 3567888999999999997654
No 85
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.05 E-value=2.6e-09 Score=91.00 Aligned_cols=136 Identities=15% Similarity=0.089 Sum_probs=89.4
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC--CCCCcEEEecCccChhhHHHHHhhcCC
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--PIEGVIQVQGDITNARTAEVVIRHFDG 117 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~--~i~gV~~i~gDIt~~~t~~~I~~~~~~ 117 (316)
.++.+|||+|||+|.++..++++ . +|+|+|+++.+ ...+++++++|+.+. +..
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~---------------~-~v~gvD~s~~~~~~~~~~~~~~~d~~~~---------~~~ 76 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKR---------------N-TVVSTDLNIRALESHRGGNLVRADLLCS---------INQ 76 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTT---------------S-EEEEEESCHHHHHTCSSSCEEECSTTTT---------BCG
T ss_pred CCCCeEEEeccCccHHHHHHHhc---------------C-cEEEEECCHHHHhcccCCeEEECChhhh---------ccc
Confidence 35679999999999999888753 2 89999999842 256789999999873 334
Q ss_pred ccccEEEeCCCCCCCCCC---CccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCCCHHHHHHHHHhc-CCceEEecCC
Q 021161 118 CKADLVVCDGAPDVTGLH---DMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLF-FPVVTFAKPK 193 (316)
Q Consensus 118 ~~~DlVvsDgapdvtG~~---~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~~~~~l~~~l~~~-F~~V~~~KP~ 193 (316)
++||+|+|+.+....... ...+. ....+..+.+.| |||.+++..........+...++.. |+.+.+.+-.
T Consensus 77 ~~fD~i~~n~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l-pgG~l~~~~~~~~~~~~l~~~l~~~gf~~~~~~~~~ 150 (170)
T 3q87_B 77 ESVDVVVFNPPYVPDTDDPIIGGGYL-----GREVIDRFVDAV-TVGMLYLLVIEANRPKEVLARLEERGYGTRILKVRK 150 (170)
T ss_dssp GGCSEEEECCCCBTTCCCTTTBCCGG-----GCHHHHHHHHHC-CSSEEEEEEEGGGCHHHHHHHHHHTTCEEEEEEEEE
T ss_pred CCCCEEEECCCCccCCccccccCCcc-----hHHHHHHHHhhC-CCCEEEEEEecCCCHHHHHHHHHHCCCcEEEEEeec
Confidence 789999998643211111 00000 012345555666 9999999776666777777777664 7666665432
Q ss_pred CCCCCCcceEEEEeccc
Q 021161 194 SSRNSSIEAFAVCENYF 210 (316)
Q Consensus 194 sSR~~S~E~fvVc~gf~ 210 (316)
...|..++.+.++
T Consensus 151 ----~~~e~~~~~~~~~ 163 (170)
T 3q87_B 151 ----ILGETVYIIKGEK 163 (170)
T ss_dssp ----CSSSEEEEEEEEC
T ss_pred ----cCCceEEEEEEec
Confidence 2335555555544
No 86
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.05 E-value=8.6e-10 Score=97.47 Aligned_cols=98 Identities=21% Similarity=0.184 Sum_probs=73.8
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC---------CCCCcEEEecCccChhhHH
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAE 109 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~---------~i~gV~~i~gDIt~~~t~~ 109 (316)
+.++.+|||+|||+|.++..++++++ +.++|+|+|+++.+ ..++++++++|+.+....
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~------------~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~- 137 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVG------------WEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEY- 137 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHC------------TTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGG-
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhC------------CCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchh-
Confidence 35788999999999999999999874 34799999999831 236899999999875311
Q ss_pred HHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEE
Q 021161 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (316)
Q Consensus 110 ~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~K 166 (316)
..+. ++||+|++|.. ..+. ....+..+.++|||||.|++.
T Consensus 138 ---~~~~-~~~D~v~~~~~-------~~~~------~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 138 ---RALV-PKVDVIFEDVA-------QPTQ------AKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp ---TTTC-CCEEEEEECCC-------STTH------HHHHHHHHHHHEEEEEEEEEE
T ss_pred ---hccc-CCceEEEECCC-------CHhH------HHHHHHHHHHhcCCCCEEEEE
Confidence 1122 58999999864 1121 123377889999999999986
No 87
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.04 E-value=7.9e-10 Score=100.97 Aligned_cols=99 Identities=15% Similarity=0.112 Sum_probs=74.8
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------C-CCCcEEEecCccChh
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------P-IEGVIQVQGDITNAR 106 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~-i~gV~~i~gDIt~~~ 106 (316)
+.++.+|||+|||+|.++..++++.+ .+|+|+|+++.+ . .++++++++|+.+.
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~--------------~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~- 126 (287)
T 1kpg_A 62 LQPGMTLLDVGCGWGATMMRAVEKYD--------------VNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQF- 126 (287)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC--------------CEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGC-
T ss_pred CCCcCEEEEECCcccHHHHHHHHHcC--------------CEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhC-
Confidence 36788999999999999999997764 599999999732 1 24789999998652
Q ss_pred hHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCC
Q 021161 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK 171 (316)
Q Consensus 107 t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~ 171 (316)
+ ++||+|+|.......+..+ ...++..+.++|||||.|++..+...
T Consensus 127 ---------~-~~fD~v~~~~~l~~~~~~~---------~~~~l~~~~~~LkpgG~l~~~~~~~~ 172 (287)
T 1kpg_A 127 ---------D-EPVDRIVSIGAFEHFGHER---------YDAFFSLAHRLLPADGVMLLHTITGL 172 (287)
T ss_dssp ---------C-CCCSEEEEESCGGGTCTTT---------HHHHHHHHHHHSCTTCEEEEEEEEEC
T ss_pred ---------C-CCeeEEEEeCchhhcChHH---------HHHHHHHHHHhcCCCCEEEEEEecCC
Confidence 3 6899999986543222111 23567888999999999999776543
No 88
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.04 E-value=1.8e-09 Score=101.01 Aligned_cols=141 Identities=18% Similarity=0.179 Sum_probs=94.6
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----------------CCCCcEEEecCcc
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------------PIEGVIQVQGDIT 103 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----------------~i~gV~~i~gDIt 103 (316)
.+..+|||||||+|+++..++++. +..+|++||+++.. ..++++++.+|..
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~-------------~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~ 148 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHK-------------NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGV 148 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCT-------------TCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSC
T ss_pred CCCCEEEEEeCChhHHHHHHHhCC-------------CCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHH
Confidence 456899999999999999998753 24689999999952 1347899999988
Q ss_pred ChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHH-HHHHHHHHHHcccCCcEEEEEEc----cCCCHHHHHH
Q 021161 104 NARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQL-ILAGLTVVTHVLKEGGKFIAKIF----RGKDTSLLYC 178 (316)
Q Consensus 104 ~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L-~~aaL~~a~~vLkpGG~fV~Kif----~~~~~~~l~~ 178 (316)
..- . ...++||+|++|.... .+. .+ .| ....+..+.++|+|||.|++..- .......+..
T Consensus 149 ~~l------~-~~~~~fDvIi~D~~~p-~~~---~~----~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~~~~~~~~~~ 213 (294)
T 3adn_A 149 NFV------N-QTSQTFDVIISDCTDP-IGP---GE----SLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHR 213 (294)
T ss_dssp C----------CCCCCEEEEEECC------------------CCHHHHHHHHHTEEEEEEEEEEEEECSSCCHHHHHHHH
T ss_pred HHH------h-hcCCCccEEEECCCCc-cCc---ch----hccHHHHHHHHHHhcCCCCEEEEecCCcccchHHHHHHHH
Confidence 631 1 1346899999997421 111 00 11 14567788999999999999752 2233566778
Q ss_pred HHHhcCCceEEec-CCCCCCCCcceEEEEec
Q 021161 179 QLKLFFPVVTFAK-PKSSRNSSIEAFAVCEN 208 (316)
Q Consensus 179 ~l~~~F~~V~~~K-P~sSR~~S~E~fvVc~g 208 (316)
.++..|..|..+. +..+-.+..-.|++|..
T Consensus 214 ~l~~~F~~v~~~~~~vp~~p~g~~~f~~as~ 244 (294)
T 3adn_A 214 KLSHYFSDVGFYQAAIPTYYGGIMTFAWATD 244 (294)
T ss_dssp HHHHHCSEEEEEEEECTTSSSSEEEEEEEES
T ss_pred HHHHHCCCeEEEEEEecccCCCceEEEEEeC
Confidence 8888899887653 22233334446788764
No 89
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.04 E-value=6.5e-10 Score=100.56 Aligned_cols=95 Identities=14% Similarity=0.158 Sum_probs=71.7
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCC-CcEEEecCccChhh
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITNART 107 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~-gV~~i~gDIt~~~t 107 (316)
.++.+|||+|||+|.++..+++.++ ++++|+++|+++.. .+. +|+++++|+.+.
T Consensus 62 ~~~~~VLdiG~G~G~~~~~la~~~~------------~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~-- 127 (248)
T 3tfw_A 62 TQAKRILEIGTLGGYSTIWMARELP------------ADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQS-- 127 (248)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTSC------------TTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHH--
T ss_pred cCCCEEEEecCCchHHHHHHHHhCC------------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH--
Confidence 4778999999999999999998774 35799999999831 233 689999998652
Q ss_pred HHHHHhhcC-CccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEE
Q 021161 108 AEVVIRHFD-GCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (316)
Q Consensus 108 ~~~I~~~~~-~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~K 166 (316)
+..+. .++||+|++|+.. ..+ ...+..+.++|||||.|++-
T Consensus 128 ----l~~~~~~~~fD~V~~d~~~--------~~~------~~~l~~~~~~LkpGG~lv~~ 169 (248)
T 3tfw_A 128 ----LESLGECPAFDLIFIDADK--------PNN------PHYLRWALRYSRPGTLIIGD 169 (248)
T ss_dssp ----HHTCCSCCCCSEEEECSCG--------GGH------HHHHHHHHHTCCTTCEEEEE
T ss_pred ----HHhcCCCCCeEEEEECCch--------HHH------HHHHHHHHHhcCCCeEEEEe
Confidence 12222 3589999998731 111 24577888999999999875
No 90
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.03 E-value=6.9e-10 Score=99.10 Aligned_cols=97 Identities=24% Similarity=0.316 Sum_probs=74.6
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCCcEEEecCccChhhH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~gV~~i~gDIt~~~t~ 108 (316)
+++.+|||+|||+|.++..++++. .+|+++|+++.+ .++++.++++|+.+..
T Consensus 20 ~~~~~vLDiGcG~G~~~~~l~~~~---------------~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-- 82 (239)
T 1xxl_A 20 RAEHRVLDIGAGAGHTALAFSPYV---------------QECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP-- 82 (239)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGS---------------SEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC--
T ss_pred CCCCEEEEEccCcCHHHHHHHHhC---------------CEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCC--
Confidence 678899999999999999988653 489999999832 2467999999998753
Q ss_pred HHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccC
Q 021161 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG 170 (316)
Q Consensus 109 ~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~ 170 (316)
+..++||+|+|..... |-.+ ...++..+.++|||||.|++..+..
T Consensus 83 ------~~~~~fD~v~~~~~l~----~~~~-------~~~~l~~~~~~LkpgG~l~~~~~~~ 127 (239)
T 1xxl_A 83 ------FPDDSFDIITCRYAAH----HFSD-------VRKAVREVARVLKQDGRFLLVDHYA 127 (239)
T ss_dssp ------SCTTCEEEEEEESCGG----GCSC-------HHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred ------CCCCcEEEEEECCchh----hccC-------HHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 4557899999986432 1112 1356888899999999999866543
No 91
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.03 E-value=7.4e-10 Score=97.97 Aligned_cols=105 Identities=12% Similarity=0.064 Sum_probs=75.4
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCCcEEEecCccChhhH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~gV~~i~gDIt~~~t~ 108 (316)
.++.+|||||||+|.++..++++.+ +..|+|||+++.+ .+++|.++++|+.+..
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~p-------------~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~-- 101 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQNP-------------DINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLT-- 101 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHCT-------------TSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHH--
T ss_pred CCCceEEEEecCCCHHHHHHHHHCC-------------CCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHH--
Confidence 4678999999999999999998863 5799999999831 2568999999998732
Q ss_pred HHHHhhcCCccccEEEeCCCC-CCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEE
Q 021161 109 EVVIRHFDGCKADLVVCDGAP-DVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (316)
Q Consensus 109 ~~I~~~~~~~~~DlVvsDgap-dvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Ki 167 (316)
..+..+.+|.|++..+. .....|..... .....+..+.++|||||.|++.+
T Consensus 102 ----~~~~~~~~d~v~~~~~~p~~~~~~~~~rl----~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 102 ----DVFEPGEVKRVYLNFSDPWPKKRHEKRRL----TYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp ----HHCCTTSCCEEEEESCCCCCSGGGGGGST----TSHHHHHHHHHHHTTSCEEEEEE
T ss_pred ----hhcCcCCcCEEEEECCCCCcCcccccccc----CcHHHHHHHHHHcCCCCEEEEEe
Confidence 23566789999987531 11100100000 01356788899999999999976
No 92
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.03 E-value=9.3e-10 Score=95.17 Aligned_cols=109 Identities=18% Similarity=0.227 Sum_probs=78.0
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC---------CCCCcEEEecCccChhhHH
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAE 109 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~---------~i~gV~~i~gDIt~~~t~~ 109 (316)
+.++.+|||+|||+|.++..++++.. .+|+++|+++.+ ..+++.++++|+.+..
T Consensus 40 ~~~~~~vLdiGcG~G~~~~~l~~~~~--------------~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~--- 102 (215)
T 2pxx_A 40 LRPEDRILVLGCGNSALSYELFLGGF--------------PNVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLD--- 102 (215)
T ss_dssp CCTTCCEEEETCTTCSHHHHHHHTTC--------------CCEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCC---
T ss_pred cCCCCeEEEECCCCcHHHHHHHHcCC--------------CcEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCC---
Confidence 47889999999999999999987632 389999999832 2357999999998753
Q ss_pred HHHhhcCCccccEEEeCCCCCCC----C-CCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccC
Q 021161 110 VVIRHFDGCKADLVVCDGAPDVT----G-LHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG 170 (316)
Q Consensus 110 ~I~~~~~~~~~DlVvsDgapdvt----G-~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~ 170 (316)
+..++||+|++++..+.. + .+...+ ....-...++..+.++|||||.|++..+..
T Consensus 103 -----~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 103 -----FPSASFDVVLEKGTLDALLAGERDPWTVSS-EGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp -----SCSSCEEEEEEESHHHHHTTTCSCTTSCCH-HHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred -----CCCCcccEEEECcchhhhcccccccccccc-chhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 445789999998642110 0 111111 112233567888999999999999987754
No 93
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.02 E-value=8.9e-10 Score=98.47 Aligned_cols=93 Identities=16% Similarity=0.172 Sum_probs=70.7
Q ss_pred CCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CC--CCcEEEecCccChhhH
Q 021161 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI--EGVIQVQGDITNARTA 108 (316)
Q Consensus 42 ~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i--~gV~~i~gDIt~~~t~ 108 (316)
+.+|||||||+|.++..+++.++ ++++|++||+++.+ .+ .+|++++||+.+.
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~------------~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~--- 121 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLA------------DNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDV--- 121 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSC------------TTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHH---
T ss_pred CCCEEEEcCCchHHHHHHHHhCC------------CCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHH---
Confidence 34999999999999999999874 35899999999842 23 3689999998653
Q ss_pred HHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEE
Q 021161 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (316)
Q Consensus 109 ~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~K 166 (316)
+..+..++||+|++|+.. .+ + ...+..+.++|||||.|++-
T Consensus 122 ---l~~~~~~~fD~V~~d~~~-----~~---~------~~~l~~~~~~LkpGG~lv~d 162 (221)
T 3dr5_A 122 ---MSRLANDSYQLVFGQVSP-----MD---L------KALVDAAWPLLRRGGALVLA 162 (221)
T ss_dssp ---GGGSCTTCEEEEEECCCT-----TT---H------HHHHHHHHHHEEEEEEEEET
T ss_pred ---HHHhcCCCcCeEEEcCcH-----HH---H------HHHHHHHHHHcCCCcEEEEe
Confidence 223435789999999642 11 1 23467788999999999973
No 94
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.02 E-value=1.2e-09 Score=97.36 Aligned_cols=121 Identities=12% Similarity=0.034 Sum_probs=85.0
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC--------C---CCCcEEEecCccChhhH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------P---IEGVIQVQGDITNARTA 108 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~--------~---i~gV~~i~gDIt~~~t~ 108 (316)
.++.+|||+|||+|.++..++++. ..+|+++|+++.+ . ..++.++++|+.+..
T Consensus 78 ~~~~~vLDiGcG~G~~~~~l~~~~--------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~-- 141 (241)
T 2ex4_A 78 TGTSCALDCGAGIGRITKRLLLPL--------------FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFT-- 141 (241)
T ss_dssp CCCSEEEEETCTTTHHHHHTTTTT--------------CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCC--
T ss_pred CCCCEEEEECCCCCHHHHHHHHhc--------------CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcC--
Confidence 358899999999999998887654 2589999999732 1 124788999987643
Q ss_pred HHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCC--------------CHH
Q 021161 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK--------------DTS 174 (316)
Q Consensus 109 ~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~--------------~~~ 174 (316)
+..++||+|+|+... +.+.. .....++..+.++|||||.|++..+... ...
T Consensus 142 ------~~~~~fD~v~~~~~l-----~~~~~----~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~ 206 (241)
T 2ex4_A 142 ------PEPDSYDVIWIQWVI-----GHLTD----QHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLD 206 (241)
T ss_dssp ------CCSSCEEEEEEESCG-----GGSCH----HHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHH
T ss_pred ------CCCCCEEEEEEcchh-----hhCCH----HHHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHH
Confidence 344689999998643 22221 1124668888999999999998654211 356
Q ss_pred HHHHHHHhc-CCceEEec
Q 021161 175 LLYCQLKLF-FPVVTFAK 191 (316)
Q Consensus 175 ~l~~~l~~~-F~~V~~~K 191 (316)
.+...++.. |+.+.+..
T Consensus 207 ~~~~~l~~aGf~~~~~~~ 224 (241)
T 2ex4_A 207 VVRRIICSAGLSLLAEER 224 (241)
T ss_dssp HHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHcCCeEEEeee
Confidence 666767655 87776653
No 95
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.02 E-value=3.6e-10 Score=103.54 Aligned_cols=114 Identities=12% Similarity=0.078 Sum_probs=81.8
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC------------CCCCcEEEecCccChh
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------------PIEGVIQVQGDITNAR 106 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~------------~i~gV~~i~gDIt~~~ 106 (316)
+.++.+|||+|||+|.++..+++.+. +..+|+++|+++.+ ..++++++++|+.+.
T Consensus 108 ~~~~~~VLD~G~G~G~~~~~la~~~~------------~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~- 174 (275)
T 1yb2_A 108 LRPGMDILEVGVGSGNMSSYILYALN------------GKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADF- 174 (275)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHT------------TSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTC-
T ss_pred CCCcCEEEEecCCCCHHHHHHHHHcC------------CCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhcc-
Confidence 36788999999999999999999863 34799999998731 235789999999862
Q ss_pred hHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCCCHHHHHHHHHhc-CC
Q 021161 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLF-FP 185 (316)
Q Consensus 107 t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~~~~~l~~~l~~~-F~ 185 (316)
+..++||+|++|.. + .+ .++..+.++|||||.+++.+........+...++.. |.
T Consensus 175 --------~~~~~fD~Vi~~~~-~------~~---------~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~l~~~Gf~ 230 (275)
T 1yb2_A 175 --------ISDQMYDAVIADIP-D------PW---------NHVQKIASMMKPGSVATFYLPNFDQSEKTVLSLSASGMH 230 (275)
T ss_dssp --------CCSCCEEEEEECCS-C------GG---------GSHHHHHHTEEEEEEEEEEESSHHHHHHHHHHSGGGTEE
T ss_pred --------CcCCCccEEEEcCc-C------HH---------HHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCe
Confidence 34568999999742 1 11 346788999999999999765432334444444433 54
Q ss_pred ceEE
Q 021161 186 VVTF 189 (316)
Q Consensus 186 ~V~~ 189 (316)
.+.+
T Consensus 231 ~~~~ 234 (275)
T 1yb2_A 231 HLET 234 (275)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4443
No 96
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.02 E-value=1.5e-10 Score=104.22 Aligned_cols=100 Identities=13% Similarity=0.035 Sum_probs=72.5
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----------CCCCcEEEecCccChhhHH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTAE 109 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----------~i~gV~~i~gDIt~~~t~~ 109 (316)
.+|.||||+|||+|..+..++++.+ .+|++||+++.. .-.++.++++|..+.
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~--------------~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~---- 120 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPI--------------DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDV---- 120 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCE--------------EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHH----
T ss_pred cCCCeEEEECCCccHHHHHHHHhCC--------------cEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhh----
Confidence 5789999999999999988876432 589999999831 123577888887542
Q ss_pred HHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEE
Q 021161 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (316)
Q Consensus 110 ~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~ 165 (316)
...+..++||.|+.|..+.....+.... ...++..+.++|||||.|+.
T Consensus 121 --~~~~~~~~FD~i~~D~~~~~~~~~~~~~------~~~~~~e~~rvLkPGG~l~f 168 (236)
T 3orh_A 121 --APTLPDGHFDGILYDTYPLSEETWHTHQ------FNFIKNHAFRLLKPGGVLTY 168 (236)
T ss_dssp --GGGSCTTCEEEEEECCCCCBGGGTTTHH------HHHHHHTHHHHEEEEEEEEE
T ss_pred --cccccccCCceEEEeeeecccchhhhcc------hhhhhhhhhheeCCCCEEEE
Confidence 2346678899999997543332222211 24567889999999999986
No 97
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.02 E-value=2.3e-10 Score=100.42 Aligned_cols=95 Identities=12% Similarity=-0.031 Sum_probs=70.5
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC--------C---------------CCCcE
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------P---------------IEGVI 96 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~--------~---------------i~gV~ 96 (316)
.++.+|||+|||+|..+..|+++. .+|+|||+++.+ . ..+|+
T Consensus 21 ~~~~~vLD~GCG~G~~~~~la~~g---------------~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~ 85 (203)
T 1pjz_A 21 VPGARVLVPLCGKSQDMSWLSGQG---------------YHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIE 85 (203)
T ss_dssp CTTCEEEETTTCCSHHHHHHHHHC---------------CEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSE
T ss_pred CCCCEEEEeCCCCcHhHHHHHHCC---------------CeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccE
Confidence 577899999999999999999862 589999999831 1 24789
Q ss_pred EEecCccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEE
Q 021161 97 QVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (316)
Q Consensus 97 ~i~gDIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~ 165 (316)
++++|+++..... .++||+|++.++.. .+.. .....++..+.++|||||.+++
T Consensus 86 ~~~~d~~~l~~~~-------~~~fD~v~~~~~l~-----~l~~----~~~~~~l~~~~r~LkpgG~~~l 138 (203)
T 1pjz_A 86 IWCGDFFALTARD-------IGHCAAFYDRAAMI-----ALPA----DMRERYVQHLEALMPQACSGLL 138 (203)
T ss_dssp EEEECCSSSTHHH-------HHSEEEEEEESCGG-----GSCH----HHHHHHHHHHHHHSCSEEEEEE
T ss_pred EEECccccCCccc-------CCCEEEEEECcchh-----hCCH----HHHHHHHHHHHHHcCCCcEEEE
Confidence 9999999875211 15799999876432 1221 1124567889999999999444
No 98
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.02 E-value=1.1e-09 Score=93.65 Aligned_cols=94 Identities=17% Similarity=0.146 Sum_probs=70.5
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCCcEEEecCccChhhHH
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTAE 109 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~gV~~i~gDIt~~~t~~ 109 (316)
++.+|||+|||+|.++..++++ + .+|+++|+++.+ .++++.++++|+.+..
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~-~--------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~--- 93 (199)
T 2xvm_A 32 KPGKTLDLGCGNGRNSLYLAAN-G--------------YDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLT--- 93 (199)
T ss_dssp CSCEEEEETCTTSHHHHHHHHT-T--------------CEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCC---
T ss_pred CCCeEEEEcCCCCHHHHHHHHC-C--------------CeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCC---
Confidence 5679999999999999999875 2 589999999832 2457899999998753
Q ss_pred HHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEE
Q 021161 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (316)
Q Consensus 110 ~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Ki 167 (316)
+ .++||+|+|....... ..+. ....+..+.++|+|||.+++..
T Consensus 94 -----~-~~~~D~v~~~~~l~~~---~~~~------~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 94 -----F-DRQYDFILSTVVLMFL---EAKT------IPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp -----C-CCCEEEEEEESCGGGS---CGGG------HHHHHHHHHHTEEEEEEEEEEE
T ss_pred -----C-CCCceEEEEcchhhhC---CHHH------HHHHHHHHHHhcCCCeEEEEEE
Confidence 3 4689999998643211 1111 2456788899999999987654
No 99
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.01 E-value=1.5e-09 Score=95.15 Aligned_cols=99 Identities=18% Similarity=0.137 Sum_probs=73.0
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC--------C---C-----CCcEEEecCc
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------P---I-----EGVIQVQGDI 102 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~--------~---i-----~gV~~i~gDI 102 (316)
++++.+|||+|||+|.++..++++ + .+|+++|+++.+ . + .++.++++|+
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~-~--------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~ 92 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASK-G--------------YSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENA 92 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT-T--------------CEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCT
T ss_pred CCCCCeEEEECCCCCHHHHHHHhC-C--------------CeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecc
Confidence 468899999999999999999876 2 589999999831 1 1 1468899999
Q ss_pred cChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEc
Q 021161 103 TNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (316)
Q Consensus 103 t~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif 168 (316)
.+.. +..++||+|+|..... +..+.. ....++..+.++|||||.|++..+
T Consensus 93 ~~~~--------~~~~~~D~v~~~~~l~----~~~~~~----~~~~~l~~~~~~L~pgG~l~~~~~ 142 (235)
T 3sm3_A 93 SSLS--------FHDSSFDFAVMQAFLT----SVPDPK----ERSRIIKEVFRVLKPGAYLYLVEF 142 (235)
T ss_dssp TSCC--------SCTTCEEEEEEESCGG----GCCCHH----HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccC--------CCCCceeEEEEcchhh----cCCCHH----HHHHHHHHHHHHcCCCeEEEEEEC
Confidence 8753 4457899999975321 111211 123567888999999999998765
No 100
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.01 E-value=3e-10 Score=96.27 Aligned_cols=114 Identities=22% Similarity=0.276 Sum_probs=83.3
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CC-CCcEEEecCccChh
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNAR 106 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i-~gV~~i~gDIt~~~ 106 (316)
+.++.+|||+|||+|.++..+++.. .+|+++|+++.+ .+ .++.++++|+.+.
T Consensus 31 ~~~~~~vldiG~G~G~~~~~l~~~~---------------~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~- 94 (192)
T 1l3i_A 31 PGKNDVAVDVGCGTGGVTLELAGRV---------------RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEA- 94 (192)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHTTS---------------SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHH-
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhc---------------CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHh-
Confidence 3577899999999999999988653 589999998731 23 5788999998652
Q ss_pred hHHHHHhhcCC-ccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCCCHHHHHHHHHhc-C
Q 021161 107 TAEVVIRHFDG-CKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLF-F 184 (316)
Q Consensus 107 t~~~I~~~~~~-~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~~~~~l~~~l~~~-F 184 (316)
+.. .+||+|++++.. ++ ....+..+.++|+|||.+++..+.......+...++.. |
T Consensus 95 --------~~~~~~~D~v~~~~~~-----~~---------~~~~l~~~~~~l~~gG~l~~~~~~~~~~~~~~~~l~~~g~ 152 (192)
T 1l3i_A 95 --------LCKIPDIDIAVVGGSG-----GE---------LQEILRIIKDKLKPGGRIIVTAILLETKFEAMECLRDLGF 152 (192)
T ss_dssp --------HTTSCCEEEEEESCCT-----TC---------HHHHHHHHHHTEEEEEEEEEEECBHHHHHHHHHHHHHTTC
T ss_pred --------cccCCCCCEEEECCch-----HH---------HHHHHHHHHHhcCCCcEEEEEecCcchHHHHHHHHHHCCC
Confidence 121 479999998642 11 14567888999999999999777655556666666654 6
Q ss_pred CceEEec
Q 021161 185 PVVTFAK 191 (316)
Q Consensus 185 ~~V~~~K 191 (316)
.+.+.+
T Consensus 153 -~~~~~~ 158 (192)
T 1l3i_A 153 -DVNITE 158 (192)
T ss_dssp -CCEEEE
T ss_pred -ceEEEE
Confidence 555443
No 101
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.01 E-value=1.3e-09 Score=105.28 Aligned_cols=119 Identities=20% Similarity=0.137 Sum_probs=83.2
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCC---CcEEEecCccChh
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE---GVIQVQGDITNAR 106 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~---gV~~i~gDIt~~~ 106 (316)
++.+|||||||+|.++..++++.+ ..+|++||+++.+ .+. .+.++.+|+.+.
T Consensus 222 ~~~~VLDlGcG~G~~s~~la~~~p-------------~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~- 287 (375)
T 4dcm_A 222 LEGEIVDLGCGNGVIGLTLLDKNP-------------QAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSG- 287 (375)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCT-------------TCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTT-
T ss_pred CCCeEEEEeCcchHHHHHHHHHCC-------------CCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhcc-
Confidence 458999999999999999998863 4799999999853 122 477899999873
Q ss_pred hHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCCCHHHHHHHHHhcCCc
Q 021161 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFFPV 186 (316)
Q Consensus 107 t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~~~~~l~~~l~~~F~~ 186 (316)
+..++||+|+||.+... +....+ .+....+..+.++|||||.|++-..+..... ..++..|..
T Consensus 288 --------~~~~~fD~Ii~nppfh~-~~~~~~-----~~~~~~l~~~~~~LkpgG~l~iv~n~~~~~~---~~l~~~fg~ 350 (375)
T 4dcm_A 288 --------VEPFRFNAVLCNPPFHQ-QHALTD-----NVAWEMFHHARRCLKINGELYIVANRHLDYF---HKLKKIFGN 350 (375)
T ss_dssp --------CCTTCEEEEEECCCC--------C-----CHHHHHHHHHHHHEEEEEEEEEEEETTSCHH---HHHHHHHSC
T ss_pred --------CCCCCeeEEEECCCccc-CcccCH-----HHHHHHHHHHHHhCCCCcEEEEEEECCcCHH---HHHHHhcCC
Confidence 45578999999975421 111111 1223567889999999999999665554443 345556666
Q ss_pred eEEe
Q 021161 187 VTFA 190 (316)
Q Consensus 187 V~~~ 190 (316)
+...
T Consensus 351 ~~~~ 354 (375)
T 4dcm_A 351 CTTI 354 (375)
T ss_dssp CEEE
T ss_pred EEEE
Confidence 6654
No 102
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.01 E-value=7.3e-10 Score=99.09 Aligned_cols=112 Identities=23% Similarity=0.279 Sum_probs=82.1
Q ss_pred chhhhhhHHhhhHHcCCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC------CCCCc
Q 021161 22 RARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGV 95 (316)
Q Consensus 22 raRsa~KL~qId~~f~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~------~i~gV 95 (316)
+.+.+.+|++. .. ..++.+|||+|||+|.++..++++.+ ..+|+++|+++.+ ..+++
T Consensus 18 ~~~~~~~l~~~---~~-~~~~~~vLdiG~G~G~~~~~l~~~~~-------------~~~v~~~D~s~~~~~~a~~~~~~~ 80 (259)
T 2p35_A 18 RTRPARDLLAQ---VP-LERVLNGYDLGCGPGNSTELLTDRYG-------------VNVITGIDSDDDMLEKAADRLPNT 80 (259)
T ss_dssp GGHHHHHHHTT---CC-CSCCSSEEEETCTTTHHHHHHHHHHC-------------TTSEEEEESCHHHHHHHHHHSTTS
T ss_pred HHHHHHHHHHh---cC-CCCCCEEEEecCcCCHHHHHHHHhCC-------------CCEEEEEECCHHHHHHHHHhCCCc
Confidence 34455555442 22 35678999999999999999999873 4689999999842 15689
Q ss_pred EEEecCccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccC
Q 021161 96 IQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG 170 (316)
Q Consensus 96 ~~i~gDIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~ 170 (316)
.++++|+.+.. ..++||+|+|..... .... ...++..+.++|||||.|++.++..
T Consensus 81 ~~~~~d~~~~~---------~~~~fD~v~~~~~l~-----~~~~------~~~~l~~~~~~L~pgG~l~~~~~~~ 135 (259)
T 2p35_A 81 NFGKADLATWK---------PAQKADLLYANAVFQ-----WVPD------HLAVLSQLMDQLESGGVLAVQMPDN 135 (259)
T ss_dssp EEEECCTTTCC---------CSSCEEEEEEESCGG-----GSTT------HHHHHHHHGGGEEEEEEEEEEEECC
T ss_pred EEEECChhhcC---------ccCCcCEEEEeCchh-----hCCC------HHHHHHHHHHhcCCCeEEEEEeCCC
Confidence 99999998742 246899999976432 1211 1356788899999999999987654
No 103
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.01 E-value=1.2e-09 Score=94.46 Aligned_cols=102 Identities=25% Similarity=0.378 Sum_probs=75.0
Q ss_pred hhhHHcCCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CC-CCcEEE
Q 021161 31 QIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQV 98 (316)
Q Consensus 31 qId~~f~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i-~gV~~i 98 (316)
++.+.+.. +++ +|||+|||+|.++..++++. +.+|+++|+++.+ .+ .+++++
T Consensus 35 ~~~~~~~~-~~~-~vLdiG~G~G~~~~~l~~~~--------------~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~ 98 (219)
T 3dlc_A 35 NIINRFGI-TAG-TCIDIGSGPGALSIALAKQS--------------DFSIRALDFSKHMNEIALKNIADANLNDRIQIV 98 (219)
T ss_dssp HHHHHHCC-CEE-EEEEETCTTSHHHHHHHHHS--------------EEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEE
T ss_pred HHHHhcCC-CCC-EEEEECCCCCHHHHHHHHcC--------------CCeEEEEECCHHHHHHHHHHHHhccccCceEEE
Confidence 34444442 344 99999999999999999872 3699999998731 12 478999
Q ss_pred ecCccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEE
Q 021161 99 QGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (316)
Q Consensus 99 ~gDIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Ki 167 (316)
++|+.+.+ +..++||+|+|...... ... ...++..+.++|+|||.+++..
T Consensus 99 ~~d~~~~~--------~~~~~~D~v~~~~~l~~-----~~~------~~~~l~~~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 99 QGDVHNIP--------IEDNYADLIVSRGSVFF-----WED------VATAFREIYRILKSGGKTYIGG 148 (219)
T ss_dssp ECBTTBCS--------SCTTCEEEEEEESCGGG-----CSC------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EcCHHHCC--------CCcccccEEEECchHhh-----ccC------HHHHHHHHHHhCCCCCEEEEEe
Confidence 99998753 45578999999864321 111 1356788899999999999864
No 104
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.01 E-value=2e-09 Score=95.76 Aligned_cols=98 Identities=19% Similarity=0.216 Sum_probs=73.1
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC---------CCCCcEEEecCccChhhHH
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAE 109 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~---------~i~gV~~i~gDIt~~~t~~ 109 (316)
++++.+|||||||+|.++..++++.+ .++|+|||+++.+ ..+++.++++|+.+....
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~-------------~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~- 137 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIAD-------------KGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEY- 137 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTT-------------TSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGG-
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcC-------------CcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccc-
Confidence 35788999999999999999999863 3699999999831 236899999999874210
Q ss_pred HHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEE
Q 021161 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (316)
Q Consensus 110 ~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Ki 167 (316)
..+. .+||+|+++.. +.+ ....++..+.++|||||.|++.+
T Consensus 138 ---~~~~-~~~D~v~~~~~-------~~~------~~~~~l~~~~~~LkpgG~l~i~~ 178 (230)
T 1fbn_A 138 ---ANIV-EKVDVIYEDVA-------QPN------QAEILIKNAKWFLKKGGYGMIAI 178 (230)
T ss_dssp ---TTTS-CCEEEEEECCC-------STT------HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ---cccC-ccEEEEEEecC-------Chh------HHHHHHHHHHHhCCCCcEEEEEE
Confidence 0133 68999997742 111 12345788899999999999863
No 105
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.01 E-value=1.1e-09 Score=99.03 Aligned_cols=104 Identities=17% Similarity=0.149 Sum_probs=78.1
Q ss_pred hhHHcCCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CC-CCcEEEe
Q 021161 32 IDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQ 99 (316)
Q Consensus 32 Id~~f~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i-~gV~~i~ 99 (316)
+.+... +.++.+|||+|||+|.++..++++.+ .+|+++|+++.+ .+ .++.+++
T Consensus 53 l~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~~--------------~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~ 117 (273)
T 3bus_A 53 MIALLD-VRSGDRVLDVGCGIGKPAVRLATARD--------------VRVTGISISRPQVNQANARATAAGLANRVTFSY 117 (273)
T ss_dssp HHHHSC-CCTTCEEEEESCTTSHHHHHHHHHSC--------------CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE
T ss_pred HHHhcC-CCCCCEEEEeCCCCCHHHHHHHHhcC--------------CEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEE
Confidence 344444 35788999999999999999998753 699999999732 12 3689999
Q ss_pred cCccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEcc
Q 021161 100 GDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (316)
Q Consensus 100 gDIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~ 169 (316)
+|+.+.+ +..++||+|+|....... .+. ..++..+.++|||||.+++..+.
T Consensus 118 ~d~~~~~--------~~~~~fD~v~~~~~l~~~----~~~-------~~~l~~~~~~L~pgG~l~i~~~~ 168 (273)
T 3bus_A 118 ADAMDLP--------FEDASFDAVWALESLHHM----PDR-------GRALREMARVLRPGGTVAIADFV 168 (273)
T ss_dssp CCTTSCC--------SCTTCEEEEEEESCTTTS----SCH-------HHHHHHHHTTEEEEEEEEEEEEE
T ss_pred CccccCC--------CCCCCccEEEEechhhhC----CCH-------HHHHHHHHHHcCCCeEEEEEEee
Confidence 9998753 445789999997654321 121 35678889999999999987654
No 106
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.00 E-value=2.5e-09 Score=101.26 Aligned_cols=123 Identities=13% Similarity=0.090 Sum_probs=89.4
Q ss_pred CeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC--------C---CCCcEEEecCccChhhHHHH
Q 021161 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------P---IEGVIQVQGDITNARTAEVV 111 (316)
Q Consensus 43 ~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~--------~---i~gV~~i~gDIt~~~t~~~I 111 (316)
.+|||||||.|+.+..++++.+ +.+|++||+++.. + .++++++.+|..+.
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p-------------~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~------ 151 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYP-------------QSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMV------ 151 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHST-------------TCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHH------
T ss_pred CEEEEEECCcCHHHHHHHHHCC-------------CcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHH------
Confidence 3999999999999999998763 4699999999841 1 35799999998752
Q ss_pred HhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCCCH---HHHHHHHHhcCCceE
Q 021161 112 IRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDT---SLLYCQLKLFFPVVT 188 (316)
Q Consensus 112 ~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~~~---~~l~~~l~~~F~~V~ 188 (316)
+..+..++||+|++|... ..+.. .+.. ....+..+.++|+|||.|++........ ..++..|+..|..|.
T Consensus 152 l~~~~~~~fDvIi~D~~~-~~~~~--~~L~----t~efl~~~~r~LkpgGvlv~~~~~~~~~~~~~~~~~tL~~vF~~v~ 224 (317)
T 3gjy_A 152 AESFTPASRDVIIRDVFA-GAITP--QNFT----TVEFFEHCHRGLAPGGLYVANCGDHSDLRGAKSELAGMMEVFEHVA 224 (317)
T ss_dssp HHTCCTTCEEEEEECCST-TSCCC--GGGS----BHHHHHHHHHHEEEEEEEEEEEEECTTCHHHHHHHHHHHHHCSEEE
T ss_pred HhhccCCCCCEEEECCCC-ccccc--hhhh----HHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHHCCceE
Confidence 223445789999999632 11211 1100 1345778899999999999988655442 456778888899998
Q ss_pred Eec
Q 021161 189 FAK 191 (316)
Q Consensus 189 ~~K 191 (316)
++.
T Consensus 225 ~~~ 227 (317)
T 3gjy_A 225 VIA 227 (317)
T ss_dssp EEE
T ss_pred EEE
Confidence 875
No 107
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.00 E-value=9.5e-10 Score=99.52 Aligned_cols=99 Identities=13% Similarity=0.145 Sum_probs=72.7
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CC-CCcEEEecCccChhh
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i-~gV~~i~gDIt~~~t 107 (316)
.++.+|||||||+|.++..+++.++ ++++|++||+++.+ .+ .+|++++||+.+.
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~------------~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~-- 124 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALP------------DDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDT-- 124 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSC------------TTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHH--
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCC------------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH--
Confidence 4678999999999999999999874 35899999999842 12 3689999998653
Q ss_pred HHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEE
Q 021161 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (316)
Q Consensus 108 ~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~K 166 (316)
...+......++||+|++|+.. ..+ ...+..+.++|||||.|++-
T Consensus 125 l~~~~~~~~~~~fD~V~~d~~~--------~~~------~~~l~~~~~~LkpGG~lv~d 169 (242)
T 3r3h_A 125 LHSLLNEGGEHQFDFIFIDADK--------TNY------LNYYELALKLVTPKGLIAID 169 (242)
T ss_dssp HHHHHHHHCSSCEEEEEEESCG--------GGH------HHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHhhccCCCCEeEEEEcCCh--------HHh------HHHHHHHHHhcCCCeEEEEE
Confidence 1122111123689999999641 111 24577888999999999985
No 108
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.00 E-value=1.8e-09 Score=104.92 Aligned_cols=121 Identities=17% Similarity=0.098 Sum_probs=79.6
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCC--------CCC--cEEEecCccChhhH
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--------IEG--VIQVQGDITNARTA 108 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~--------i~g--V~~i~gDIt~~~t~ 108 (316)
.+++.+|||||||+|+|+..+++.. +.|+|||+++.+- ..| ..+.++|+.+.
T Consensus 212 ~~~g~~VLDlg~GtG~~sl~~a~~g---------------a~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~--- 273 (393)
T 4dmg_A 212 VRPGERVLDVYSYVGGFALRAARKG---------------AYALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPT--- 273 (393)
T ss_dssp CCTTCEEEEESCTTTHHHHHHHHTT---------------CEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHH---
T ss_pred hcCCCeEEEcccchhHHHHHHHHcC---------------CeEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHH---
Confidence 4568999999999999999998752 4599999998431 112 24668887653
Q ss_pred HHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccC-CCHHHHHHHHHhc
Q 021161 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG-KDTSLLYCQLKLF 183 (316)
Q Consensus 109 ~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~-~~~~~l~~~l~~~ 183 (316)
+..+.+. ||+|++|.+. .. ....+...........+..+.++|+|||.|++..+.. .....+...+...
T Consensus 274 ---l~~~~~~-fD~Ii~dpP~-f~-~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~~~~f~~~v~~a 343 (393)
T 4dmg_A 274 ---LRGLEGP-FHHVLLDPPT-LV-KRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLRLEDLLEVARRA 343 (393)
T ss_dssp ---HHTCCCC-EEEEEECCCC-CC-SSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHH
T ss_pred ---HHHhcCC-CCEEEECCCc-CC-CCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHH
Confidence 2233444 9999999632 11 1112222233344667888999999999999655543 3455555555443
No 109
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=98.99 E-value=6.3e-10 Score=99.63 Aligned_cols=114 Identities=18% Similarity=0.157 Sum_probs=82.7
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC------------CCCCcEEEecCccChh
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------------PIEGVIQVQGDITNAR 106 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~------------~i~gV~~i~gDIt~~~ 106 (316)
+.++.+|||+|||+|.++..+++.++ +..+|+++|+++.. ..++++++++|+.+..
T Consensus 94 ~~~~~~vLdiG~G~G~~~~~l~~~~~------------~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~ 161 (258)
T 2pwy_A 94 LAPGMRVLEAGTGSGGLTLFLARAVG------------EKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAE 161 (258)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHC------------TTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCC
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHhC------------CCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcC
Confidence 46788999999999999999999864 35799999998731 2357899999998642
Q ss_pred hHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCCCHHHHHHHHHhc-CC
Q 021161 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLF-FP 185 (316)
Q Consensus 107 t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~~~~~l~~~l~~~-F~ 185 (316)
+..++||+|++|.. + . ..++..+.++|+|||.+++..........+...++.. |.
T Consensus 162 --------~~~~~~D~v~~~~~-~------~---------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~gf~ 217 (258)
T 2pwy_A 162 --------LEEAAYDGVALDLM-E------P---------WKVLEKAALALKPDRFLVAYLPNITQVLELVRAAEAHPFR 217 (258)
T ss_dssp --------CCTTCEEEEEEESS-C------G---------GGGHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHTTTTEE
T ss_pred --------CCCCCcCEEEECCc-C------H---------HHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCc
Confidence 44568999999742 1 1 1346788899999999999665433444555555432 54
Q ss_pred ceE
Q 021161 186 VVT 188 (316)
Q Consensus 186 ~V~ 188 (316)
.+.
T Consensus 218 ~~~ 220 (258)
T 2pwy_A 218 LER 220 (258)
T ss_dssp EEE
T ss_pred eEE
Confidence 433
No 110
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.99 E-value=8.7e-10 Score=99.44 Aligned_cols=97 Identities=12% Similarity=0.187 Sum_probs=72.6
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC------CCCCcEEEecCccChhhHHHHHh
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIR 113 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~------~i~gV~~i~gDIt~~~t~~~I~~ 113 (316)
.++.+|||||||+|.++..++++. .+|+|+|+++.+ ..+++.++++|+.+..
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~~---------------~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~------- 106 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADSF---------------GTVEGLELSADMLAIARRRNPDAVLHHGDMRDFS------- 106 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTTS---------------SEEEEEESCHHHHHHHHHHCTTSEEEECCTTTCC-------
T ss_pred CCCCcEEEeCCcCCHHHHHHHHcC---------------CeEEEEECCHHHHHHHHhhCCCCEEEECChHHCC-------
Confidence 567899999999999999887652 589999999832 2458999999998853
Q ss_pred hcCCccccEEEeCC-CCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEc
Q 021161 114 HFDGCKADLVVCDG-APDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (316)
Q Consensus 114 ~~~~~~~DlVvsDg-apdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif 168 (316)
+ .++||+|+|.. .. +.+.. ..-...++..+.++|||||.|++..+
T Consensus 107 -~-~~~fD~v~~~~~~l-----~~~~~---~~~~~~~l~~~~~~L~pgG~l~i~~~ 152 (263)
T 3pfg_A 107 -L-GRRFSAVTCMFSSI-----GHLAG---QAELDAALERFAAHVLPDGVVVVEPW 152 (263)
T ss_dssp -C-SCCEEEEEECTTGG-----GGSCH---HHHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred -c-cCCcCEEEEcCchh-----hhcCC---HHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 2 47899999975 22 11111 11234668888999999999999643
No 111
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.99 E-value=1.1e-09 Score=96.47 Aligned_cols=99 Identities=14% Similarity=0.132 Sum_probs=71.6
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCC-CcEEEecCccChhh
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITNART 107 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~-gV~~i~gDIt~~~t 107 (316)
.++.+|||+|||+|.++..+++.++ +.++|+++|+++.+ .+. .|+++++|+.+.
T Consensus 63 ~~~~~vLdiG~G~G~~~~~la~~~~------------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-- 128 (225)
T 3tr6_A 63 MQAKKVIDIGTFTGYSAIAMGLALP------------KDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDT-- 128 (225)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCC------------TTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHH--
T ss_pred hCCCEEEEeCCcchHHHHHHHHhCC------------CCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHH--
Confidence 4678999999999999999998764 35799999999831 233 489999998653
Q ss_pred HHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEE
Q 021161 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (316)
Q Consensus 108 ~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~K 166 (316)
...+......++||+|++|+.. .. ....+..+.++|||||.|++-
T Consensus 129 ~~~~~~~~~~~~fD~v~~~~~~--------~~------~~~~l~~~~~~L~pgG~lv~~ 173 (225)
T 3tr6_A 129 LAELIHAGQAWQYDLIYIDADK--------AN------TDLYYEESLKLLREGGLIAVD 173 (225)
T ss_dssp HHHHHTTTCTTCEEEEEECSCG--------GG------HHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHhhhccCCCCccEEEECCCH--------HH------HHHHHHHHHHhcCCCcEEEEe
Confidence 1111111111689999998731 11 134577888999999999985
No 112
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=98.99 E-value=1.6e-09 Score=99.34 Aligned_cols=97 Identities=19% Similarity=0.186 Sum_probs=75.9
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CC-CCcEEEecCccChh
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNAR 106 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i-~gV~~i~gDIt~~~ 106 (316)
+.++.+|||+|||+|.++..++++.+ .+|+++|+++.+ .+ ++++++++|+.+.+
T Consensus 80 ~~~~~~vLDiGcG~G~~~~~l~~~~~--------------~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 145 (297)
T 2o57_A 80 LQRQAKGLDLGAGYGGAARFLVRKFG--------------VSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP 145 (297)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC--------------CEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhC--------------CEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCC
Confidence 46788999999999999999998863 589999999842 12 46899999998753
Q ss_pred hHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEc
Q 021161 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (316)
Q Consensus 107 t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif 168 (316)
+..++||+|+|...... ..+ ...+|..+.++|||||.|++..+
T Consensus 146 --------~~~~~fD~v~~~~~l~~----~~~-------~~~~l~~~~~~LkpgG~l~~~~~ 188 (297)
T 2o57_A 146 --------CEDNSYDFIWSQDAFLH----SPD-------KLKVFQECARVLKPRGVMAITDP 188 (297)
T ss_dssp --------SCTTCEEEEEEESCGGG----CSC-------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred --------CCCCCEeEEEecchhhh----cCC-------HHHHHHHHHHHcCCCeEEEEEEe
Confidence 45578999999765322 112 24568888999999999998764
No 113
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.99 E-value=3e-10 Score=101.30 Aligned_cols=103 Identities=14% Similarity=0.046 Sum_probs=72.1
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC--------C--CCCcEEEecCccChhhH
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------P--IEGVIQVQGDITNARTA 108 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~--------~--i~gV~~i~gDIt~~~t~ 108 (316)
..++.+|||||||+|.++..+++.. ..+|+++|+++.+ . -.++.++++|+.+.
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~~--------------~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~--- 120 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEAP--------------IDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDV--- 120 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTSC--------------EEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHH---
T ss_pred CCCCCeEEEEeccCCHHHHHHHhcC--------------CCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHh---
Confidence 3578899999999999999986532 2489999999842 1 14688999998764
Q ss_pred HHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEE
Q 021161 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (316)
Q Consensus 109 ~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Ki 167 (316)
...+..++||+|++|.... ..++.. ......++..+.++|||||.|++-.
T Consensus 121 ---~~~~~~~~fD~V~~d~~~~--~~~~~~----~~~~~~~l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 121 ---APTLPDGHFDGILYDTYPL--SEETWH----THQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp ---GGGSCTTCEEEEEECCCCC--BGGGTT----THHHHHHHHTHHHHEEEEEEEEECC
T ss_pred ---hcccCCCceEEEEECCccc--chhhhh----hhhHHHHHHHHHHhcCCCeEEEEEe
Confidence 1235567899999963221 111111 1223456788999999999999743
No 114
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.98 E-value=1.2e-09 Score=99.69 Aligned_cols=105 Identities=15% Similarity=0.183 Sum_probs=78.1
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC------CCCCcEEEecCccChhhHHHHHh
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIR 113 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~------~i~gV~~i~gDIt~~~t~~~I~~ 113 (316)
.++.+|||+|||+|.++..+++. ..+|+|+|+++.+ ..+++.++++|+.+..
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~---------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~------- 113 (279)
T 3ccf_A 56 QPGEFILDLGCGTGQLTEKIAQS---------------GAEVLGTDNAATMIEKARQNYPHLHFDVADARNFR------- 113 (279)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT---------------TCEEEEEESCHHHHHHHHHHCTTSCEEECCTTTCC-------
T ss_pred CCCCEEEEecCCCCHHHHHHHhC---------------CCeEEEEECCHHHHHHHHhhCCCCEEEECChhhCC-------
Confidence 57789999999999999999872 3699999999842 2468999999998753
Q ss_pred hcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCCCHHHHHHH
Q 021161 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQ 179 (316)
Q Consensus 114 ~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~~~~~l~~~ 179 (316)
+ .++||+|+|....... .|. ..++..+.++|||||.|++.++...+...+...
T Consensus 114 -~-~~~fD~v~~~~~l~~~----~d~-------~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~ 166 (279)
T 3ccf_A 114 -V-DKPLDAVFSNAMLHWV----KEP-------EAAIASIHQALKSGGRFVAEFGGKGNIKYILEA 166 (279)
T ss_dssp -C-SSCEEEEEEESCGGGC----SCH-------HHHHHHHHHHEEEEEEEEEEEECTTTTHHHHHH
T ss_pred -c-CCCcCEEEEcchhhhC----cCH-------HHHHHHHHHhcCCCcEEEEEecCCcchHHHHHH
Confidence 3 3689999998643211 121 356788899999999999977654444444333
No 115
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.98 E-value=1.6e-09 Score=96.10 Aligned_cols=136 Identities=16% Similarity=0.090 Sum_probs=91.8
Q ss_pred CCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC--------C----CCCcEEEecCccChhhHH
Q 021161 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------P----IEGVIQVQGDITNARTAE 109 (316)
Q Consensus 42 ~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~--------~----i~gV~~i~gDIt~~~t~~ 109 (316)
..+|||+|||+|.++..+++. ..+|+|+|+++.+ . ..+++++++|+++..
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~~---------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--- 128 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMASP---------------ERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR--- 128 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCBT---------------TEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC---
T ss_pred CCCEEEeCCCCCHHHHHHHhC---------------CCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC---
Confidence 359999999999999888642 3689999999832 1 134899999998753
Q ss_pred HHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccC----------CCHHHHHHH
Q 021161 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG----------KDTSLLYCQ 179 (316)
Q Consensus 110 ~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~----------~~~~~l~~~ 179 (316)
...+||+|+|...... ++.. .....+..+.++|||||.|++-.+.. .....+...
T Consensus 129 ------~~~~fD~v~~~~~l~~-----~~~~----~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (235)
T 3lcc_A 129 ------PTELFDLIFDYVFFCA-----IEPE----MRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEV 193 (235)
T ss_dssp ------CSSCEEEEEEESSTTT-----SCGG----GHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHH
T ss_pred ------CCCCeeEEEEChhhhc-----CCHH----HHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHH
Confidence 3458999999764322 1110 12356788899999999999876642 135667777
Q ss_pred HHhc-CCceEEecCCCC--CCCCcceEEEEeccc
Q 021161 180 LKLF-FPVVTFAKPKSS--RNSSIEAFAVCENYF 210 (316)
Q Consensus 180 l~~~-F~~V~~~KP~sS--R~~S~E~fvVc~gf~ 210 (316)
++.. |+.+.+..-..+ .....|.+..++..+
T Consensus 194 l~~~Gf~~~~~~~~~~~~~~~~g~e~~~~~~~~~ 227 (235)
T 3lcc_A 194 LVPIGFKAVSVEENPHAIPTRKGKEKLGRWKKIN 227 (235)
T ss_dssp HGGGTEEEEEEEECTTCCTTTTTSCEEEEEEESC
T ss_pred HHHcCCeEEEEEecCCccccccCHHHHhhhhhcc
Confidence 7665 776666432222 123356777766554
No 116
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=98.98 E-value=1.2e-09 Score=99.51 Aligned_cols=116 Identities=16% Similarity=0.106 Sum_probs=85.3
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC------------C--CCCcEEEecCccC
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------------P--IEGVIQVQGDITN 104 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~------------~--i~gV~~i~gDIt~ 104 (316)
+.++.+|||+|||+|.++..+++.++ +..+|+++|+++.+ . ..+++++++|+.+
T Consensus 97 ~~~~~~vLdiG~G~G~~~~~l~~~~~------------~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~ 164 (280)
T 1i9g_A 97 IFPGARVLEAGAGSGALTLSLLRAVG------------PAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLAD 164 (280)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHC------------TTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGG
T ss_pred CCCCCEEEEEcccccHHHHHHHHHhC------------CCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHh
Confidence 36788999999999999999999874 35799999998731 1 3578999999987
Q ss_pred hhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCCCHHHHHHHHHh--
Q 021161 105 ARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKL-- 182 (316)
Q Consensus 105 ~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~~~~~l~~~l~~-- 182 (316)
.. +..++||+|+++.. +.. .++..+.++|+|||.+++.+........+...++.
T Consensus 165 ~~--------~~~~~~D~v~~~~~-------~~~---------~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~~ 220 (280)
T 1i9g_A 165 SE--------LPDGSVDRAVLDML-------APW---------EVLDAVSRLLVAGGVLMVYVATVTQLSRIVEALRAKQ 220 (280)
T ss_dssp CC--------CCTTCEEEEEEESS-------CGG---------GGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHHS
T ss_pred cC--------CCCCceeEEEECCc-------CHH---------HHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhcC
Confidence 42 34568999999752 111 34678899999999999977654445555555654
Q ss_pred cCCceEEe
Q 021161 183 FFPVVTFA 190 (316)
Q Consensus 183 ~F~~V~~~ 190 (316)
.|..+.+.
T Consensus 221 ~f~~~~~~ 228 (280)
T 1i9g_A 221 CWTEPRAW 228 (280)
T ss_dssp SBCCCEEE
T ss_pred CcCCcEEE
Confidence 36555544
No 117
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=98.98 E-value=7.7e-10 Score=97.36 Aligned_cols=98 Identities=13% Similarity=0.138 Sum_probs=71.9
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCC-CcEEEecCccChhh
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITNART 107 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~-gV~~i~gDIt~~~t 107 (316)
.++.+|||+|||+|.++..+++.++ ++++|+++|+++.. .+. +++++++|+.+.
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~------------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-- 122 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLS------------SGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDS-- 122 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCC------------SSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHH--
T ss_pred hCCCEEEEecCCccHHHHHHHHhCC------------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH--
Confidence 4678999999999999999998774 25799999999831 233 489999998753
Q ss_pred HHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEE
Q 021161 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (316)
Q Consensus 108 ~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~K 166 (316)
...+... ..++||+|++|+... . ....+..+.++|+|||.+++.
T Consensus 123 ~~~~~~~-~~~~fD~v~~d~~~~--------~------~~~~l~~~~~~L~pgG~lv~~ 166 (223)
T 3duw_A 123 LQQIENE-KYEPFDFIFIDADKQ--------N------NPAYFEWALKLSRPGTVIIGD 166 (223)
T ss_dssp HHHHHHT-TCCCCSEEEECSCGG--------G------HHHHHHHHHHTCCTTCEEEEE
T ss_pred HHHHHhc-CCCCcCEEEEcCCcH--------H------HHHHHHHHHHhcCCCcEEEEe
Confidence 1122111 125799999997421 1 134577888999999999875
No 118
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.97 E-value=2.8e-09 Score=98.65 Aligned_cols=101 Identities=18% Similarity=0.266 Sum_probs=74.6
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC---------C--------------------
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------P-------------------- 91 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~---------~-------------------- 91 (316)
++.+|||+|||+|.++..++++++ ..+|+|||+++.+ .
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~-------------~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWG-------------PSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAE 112 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTC-------------CSEEEEEESCHHHHHHHHHTC----------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcC-------------CCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccc
Confidence 578999999999999999999874 4699999998731 0
Q ss_pred ---------------------------------------C-CCcEEEecCccChhhHHHHHhhcCCccccEEEeCCCCCC
Q 021161 92 ---------------------------------------I-EGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDV 131 (316)
Q Consensus 92 ---------------------------------------i-~gV~~i~gDIt~~~t~~~I~~~~~~~~~DlVvsDgapdv 131 (316)
. .+|+++++|+..... .+. .+..++||+|+|....
T Consensus 113 ~~~~~~~~~~~~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~--~~~-~~~~~~fD~I~~~~vl-- 187 (292)
T 3g07_A 113 GEEGTTTVRKRSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRD--DLV-EAQTPEYDVVLCLSLT-- 187 (292)
T ss_dssp -----------------------------CCSSTTCCSSTTTTEEEEECCCCCSSH--HHH-TTCCCCEEEEEEESCH--
T ss_pred cccccccccccccccchhhhccCccccccccccccccccccccceEEecccccCcc--ccc-cccCCCcCEEEEChHH--
Confidence 0 379999999986531 111 2345789999996521
Q ss_pred CCCCCccHHH----HHHHHHHHHHHHHHcccCCcEEEEE
Q 021161 132 TGLHDMDEFV----QSQLILAGLTVVTHVLKEGGKFIAK 166 (316)
Q Consensus 132 tG~~~~de~~----~~~L~~aaL~~a~~vLkpGG~fV~K 166 (316)
+++ ...-...++..+.++|+|||.|++.
T Consensus 188 -------~~ihl~~~~~~~~~~l~~~~~~LkpGG~lil~ 219 (292)
T 3g07_A 188 -------KWVHLNWGDEGLKRMFRRIYRHLRPGGILVLE 219 (292)
T ss_dssp -------HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -------HHhhhcCCHHHHHHHHHHHHHHhCCCcEEEEe
Confidence 122 1123466788999999999999985
No 119
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=98.97 E-value=2.8e-09 Score=96.89 Aligned_cols=113 Identities=18% Similarity=0.167 Sum_probs=84.2
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCCcEEEecCccChhh
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNART 107 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~gV~~i~gDIt~~~t 107 (316)
+.++.+|||+|||+|.++..+++. + .+|+|+|+++.+ .+. ++++++|+.+.
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~-g--------------~~v~gvDi~~~~v~~a~~n~~~~~~~-v~~~~~d~~~~-- 179 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKL-G--------------GKALGVDIDPMVLPQAEANAKRNGVR-PRFLEGSLEAA-- 179 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT-T--------------CEEEEEESCGGGHHHHHHHHHHTTCC-CEEEESCHHHH--
T ss_pred cCCCCEEEEecCCCcHHHHHHHHh-C--------------CeEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChhhc--
Confidence 467899999999999999988764 2 399999999853 123 78888887652
Q ss_pred HHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCCCHHHHHHHHHhc-CCc
Q 021161 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLF-FPV 186 (316)
Q Consensus 108 ~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~~~~~l~~~l~~~-F~~ 186 (316)
+..++||+|+++... ..+...+..+.++|+|||.|++..+.......+...++.. |+.
T Consensus 180 -------~~~~~fD~Vv~n~~~--------------~~~~~~l~~~~~~LkpgG~lils~~~~~~~~~v~~~l~~~Gf~~ 238 (254)
T 2nxc_A 180 -------LPFGPFDLLVANLYA--------------ELHAALAPRYREALVPGGRALLTGILKDRAPLVREAMAGAGFRP 238 (254)
T ss_dssp -------GGGCCEEEEEEECCH--------------HHHHHHHHHHHHHEEEEEEEEEEEEEGGGHHHHHHHHHHTTCEE
T ss_pred -------CcCCCCCEEEECCcH--------------HHHHHHHHHHHHHcCCCCEEEEEeeccCCHHHHHHHHHHCCCEE
Confidence 234689999997521 1134567888999999999999766666677777777765 766
Q ss_pred eEEe
Q 021161 187 VTFA 190 (316)
Q Consensus 187 V~~~ 190 (316)
+.+.
T Consensus 239 ~~~~ 242 (254)
T 2nxc_A 239 LEEA 242 (254)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 5553
No 120
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.97 E-value=3.5e-09 Score=93.54 Aligned_cols=96 Identities=20% Similarity=0.264 Sum_probs=72.5
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC--------CCCCcEEEecCccChhhHHHH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------PIEGVIQVQGDITNARTAEVV 111 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~--------~i~gV~~i~gDIt~~~t~~~I 111 (316)
.++.+|||+|||+|.++..++++. ..+|+++|+++.+ ...++.++++|+.+..
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~~--------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~----- 102 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAHEHG--------------ASYVLGLDLSEKMLARARAAGPDTGITYERADLDKLH----- 102 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTT--------------CSEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCC-----
T ss_pred cCCCEEEEEcCcCCHHHHHHHHCC--------------CCeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhcc-----
Confidence 367899999999999999998752 1389999999731 2247899999998743
Q ss_pred HhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEc
Q 021161 112 IRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (316)
Q Consensus 112 ~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif 168 (316)
+..++||+|+|..... .... ...++..+.++|+|||.|++.+.
T Consensus 103 ---~~~~~fD~v~~~~~l~-----~~~~------~~~~l~~~~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 103 ---LPQDSFDLAYSSLALH-----YVED------VARLFRTVHQALSPGGHFVFSTE 145 (243)
T ss_dssp ---CCTTCEEEEEEESCGG-----GCSC------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ---CCCCCceEEEEecccc-----ccch------HHHHHHHHHHhcCcCcEEEEEeC
Confidence 3457899999975322 1211 13567888999999999999765
No 121
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.96 E-value=2.8e-09 Score=96.54 Aligned_cols=95 Identities=15% Similarity=0.171 Sum_probs=73.3
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----CCCCcEEEecCccChhhHHHHHhh
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----PIEGVIQVQGDITNARTAEVVIRH 114 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----~i~gV~~i~gDIt~~~t~~~I~~~ 114 (316)
.++.+|||+|||+|.|+..+++. ..+|+|+|+++.+ ...++.++++|+.+.+
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~~~---------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~d~~~~~-------- 89 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALANQ---------------GLFVYAVEPSIVMRQQAVVHPQVEWFTGYAENLA-------- 89 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHHTT---------------TCEEEEECSCHHHHHSSCCCTTEEEECCCTTSCC--------
T ss_pred CCCCEEEEEcCcccHHHHHHHhC---------------CCEEEEEeCCHHHHHHHHhccCCEEEECchhhCC--------
Confidence 67889999999999999999862 3699999999831 2338999999998753
Q ss_pred cCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEcc
Q 021161 115 FDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (316)
Q Consensus 115 ~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~ 169 (316)
+..++||+|+|..... .+.. ...++..+.++|| ||.+++..+.
T Consensus 90 ~~~~~fD~v~~~~~l~-----~~~~------~~~~l~~~~~~Lk-gG~~~~~~~~ 132 (261)
T 3ege_A 90 LPDKSVDGVISILAIH-----HFSH------LEKSFQEMQRIIR-DGTIVLLTFD 132 (261)
T ss_dssp SCTTCBSEEEEESCGG-----GCSS------HHHHHHHHHHHBC-SSCEEEEEEC
T ss_pred CCCCCEeEEEEcchHh-----hccC------HHHHHHHHHHHhC-CcEEEEEEcC
Confidence 4557899999986432 1111 1356888999999 9988887664
No 122
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.96 E-value=8.1e-09 Score=91.96 Aligned_cols=121 Identities=16% Similarity=0.074 Sum_probs=86.1
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC---------CCCCcEEEecCccChhhHHH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAEV 110 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~---------~i~gV~~i~gDIt~~~t~~~ 110 (316)
.++.+|||+|||+|.++..++++.. .+|+++|+++.+ ...++.++++|+.+..
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~~--------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~---- 153 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKLY--------------ATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETAT---- 153 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHHC--------------SEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCC----
T ss_pred cCCCEEEEECCCcCHHHHHHHHhhc--------------CEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCC----
Confidence 4678999999999999999988753 589999998832 1256899999998753
Q ss_pred HHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccC---------------CCHHH
Q 021161 111 VIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG---------------KDTSL 175 (316)
Q Consensus 111 I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~---------------~~~~~ 175 (316)
+..++||+|+|.... +.+.. .-...++..+.++|||||.|++..... .....
T Consensus 154 ----~~~~~fD~v~~~~~l-----~~~~~----~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (254)
T 1xtp_A 154 ----LPPNTYDLIVIQWTA-----IYLTD----ADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIH 220 (254)
T ss_dssp ----CCSSCEEEEEEESCG-----GGSCH----HHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHH
T ss_pred ----CCCCCeEEEEEcchh-----hhCCH----HHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHH
Confidence 445789999997532 22221 113466788899999999999976411 12355
Q ss_pred HHHHHHhc-CCceEEec
Q 021161 176 LYCQLKLF-FPVVTFAK 191 (316)
Q Consensus 176 l~~~l~~~-F~~V~~~K 191 (316)
+...++.. |+.+.+..
T Consensus 221 ~~~~l~~aGf~~~~~~~ 237 (254)
T 1xtp_A 221 YKRLFNESGVRVVKEAF 237 (254)
T ss_dssp HHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHCCCEEEEeee
Confidence 66666544 87776643
No 123
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.96 E-value=2.4e-09 Score=99.45 Aligned_cols=99 Identities=8% Similarity=0.017 Sum_probs=75.4
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CC-CCcEEEecCccChhh
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i-~gV~~i~gDIt~~~t 107 (316)
.++.+|||+|||+|.++..++++.+ .+|+++|+++.+ .+ .++.++++|+.+.
T Consensus 89 ~~~~~vLDiGcG~G~~~~~la~~~~--------------~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-- 152 (318)
T 2fk8_A 89 KPGMTLLDIGCGWGTTMRRAVERFD--------------VNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDF-- 152 (318)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHC--------------CEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGC--
T ss_pred CCcCEEEEEcccchHHHHHHHHHCC--------------CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHC--
Confidence 5788999999999999999998763 599999999832 12 3589999998763
Q ss_pred HHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCCC
Q 021161 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKD 172 (316)
Q Consensus 108 ~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~~ 172 (316)
+ ++||+|+|.......+. +. ...++..+.++|||||.|++..+....
T Consensus 153 --------~-~~fD~v~~~~~l~~~~~---~~------~~~~l~~~~~~LkpgG~l~~~~~~~~~ 199 (318)
T 2fk8_A 153 --------A-EPVDRIVSIEAFEHFGH---EN------YDDFFKRCFNIMPADGRMTVQSSVSYH 199 (318)
T ss_dssp --------C-CCCSEEEEESCGGGTCG---GG------HHHHHHHHHHHSCTTCEEEEEEEECCC
T ss_pred --------C-CCcCEEEEeChHHhcCH---HH------HHHHHHHHHHhcCCCcEEEEEEeccCC
Confidence 2 58999999865432221 11 245678889999999999998776544
No 124
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=98.96 E-value=2.7e-09 Score=93.42 Aligned_cols=99 Identities=15% Similarity=0.129 Sum_probs=72.3
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCC-----CcEEEecCcc
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-----GVIQVQGDIT 103 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~-----gV~~i~gDIt 103 (316)
.++.+|||+|||+|.++..++++.+ ..+|+|+|+++.+ .++ ++.++++|+.
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~-------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 94 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSF-------------FEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALT 94 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTT-------------CSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTT
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCC-------------CCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcc
Confidence 4678999999999999999988642 4699999999831 122 6999999997
Q ss_pred ChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEc
Q 021161 104 NARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (316)
Q Consensus 104 ~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif 168 (316)
... +..++||+|+|..... .++.. -...++..+.++|||||.|++...
T Consensus 95 ~~~--------~~~~~fD~v~~~~~l~-----~~~~~----~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 95 YQD--------KRFHGYDAATVIEVIE-----HLDLS----RLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp SCC--------GGGCSCSEEEEESCGG-----GCCHH----HHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred ccc--------ccCCCcCEEeeHHHHH-----cCCHH----HHHHHHHHHHHHcCCCEEEEEccC
Confidence 643 2236899999976432 12211 124567888999999998877544
No 125
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.96 E-value=2.3e-09 Score=100.97 Aligned_cols=110 Identities=17% Similarity=0.153 Sum_probs=77.2
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----------------------CCCCcE
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------------------PIEGVI 96 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----------------------~i~gV~ 96 (316)
+.++.+|||+|||+|.++..+++.++ +.++|+++|+++.+ ...+++
T Consensus 103 ~~~g~~VLDiG~G~G~~~~~la~~~g------------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~ 170 (336)
T 2b25_A 103 INPGDTVLEAGSGSGGMSLFLSKAVG------------SQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVD 170 (336)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHC------------TTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEE
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHhC------------CCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceE
Confidence 36789999999999999999999864 34799999998831 025799
Q ss_pred EEecCccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCCCHHHH
Q 021161 97 QVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLL 176 (316)
Q Consensus 97 ~i~gDIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~~~~~l 176 (316)
++++|+.+... .+..++||+|++|+... . ..+..+.++|+|||.|++..........+
T Consensus 171 ~~~~d~~~~~~------~~~~~~fD~V~~~~~~~-------~---------~~l~~~~~~LkpgG~lv~~~~~~~~~~~~ 228 (336)
T 2b25_A 171 FIHKDISGATE------DIKSLTFDAVALDMLNP-------H---------VTLPVFYPHLKHGGVCAVYVVNITQVIEL 228 (336)
T ss_dssp EEESCTTCCC-------------EEEEEECSSST-------T---------TTHHHHGGGEEEEEEEEEEESSHHHHHHH
T ss_pred EEECChHHccc------ccCCCCeeEEEECCCCH-------H---------HHHHHHHHhcCCCcEEEEEeCCHHHHHHH
Confidence 99999987420 13345799999986321 0 13677899999999999866544444445
Q ss_pred HHHHHh
Q 021161 177 YCQLKL 182 (316)
Q Consensus 177 ~~~l~~ 182 (316)
+..++.
T Consensus 229 ~~~l~~ 234 (336)
T 2b25_A 229 LDGIRT 234 (336)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 555543
No 126
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.95 E-value=2.2e-09 Score=98.07 Aligned_cols=97 Identities=14% Similarity=0.198 Sum_probs=74.2
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CC-CCcEEEecCccChhh
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i-~gV~~i~gDIt~~~t 107 (316)
.++.+|||+|||+|.++..++++ + .+|+|+|+++.+ .+ ++++++++|+.+...
T Consensus 67 ~~~~~vLDiGcG~G~~~~~l~~~-~--------------~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 131 (285)
T 4htf_A 67 PQKLRVLDAGGGEGQTAIKMAER-G--------------HQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVAS 131 (285)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHT-T--------------CEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGG
T ss_pred CCCCEEEEeCCcchHHHHHHHHC-C--------------CEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhh
Confidence 34679999999999999999876 2 689999999831 12 578899999987641
Q ss_pred HHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEcc
Q 021161 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (316)
Q Consensus 108 ~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~ 169 (316)
+..++||+|+|....... .+. ..++..+.++|||||.|++..+.
T Consensus 132 -------~~~~~fD~v~~~~~l~~~----~~~-------~~~l~~~~~~LkpgG~l~~~~~~ 175 (285)
T 4htf_A 132 -------HLETPVDLILFHAVLEWV----ADP-------RSVLQTLWSVLRPGGVLSLMFYN 175 (285)
T ss_dssp -------GCSSCEEEEEEESCGGGC----SCH-------HHHHHHHHHTEEEEEEEEEEEEB
T ss_pred -------hcCCCceEEEECchhhcc----cCH-------HHHHHHHHHHcCCCeEEEEEEeC
Confidence 345799999998643211 121 35678889999999999997654
No 127
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.95 E-value=1.6e-09 Score=94.81 Aligned_cols=98 Identities=23% Similarity=0.240 Sum_probs=73.2
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----------CCCCcEEEecCccChhhH
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTA 108 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----------~i~gV~~i~gDIt~~~t~ 108 (316)
+.++.+|||||||+|.++..++++. .+|+++|+++.+ .-.+++++++|+.+..
T Consensus 36 ~~~~~~vLDlG~G~G~~~~~l~~~~---------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-- 98 (227)
T 1ve3_A 36 MKKRGKVLDLACGVGGFSFLLEDYG---------------FEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLS-- 98 (227)
T ss_dssp CCSCCEEEEETCTTSHHHHHHHHTT---------------CEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCC--
T ss_pred cCCCCeEEEEeccCCHHHHHHHHcC---------------CEEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCC--
Confidence 4568899999999999999888753 389999999731 1167899999998743
Q ss_pred HHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEc
Q 021161 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (316)
Q Consensus 109 ~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif 168 (316)
+..++||+|+|+... ..+.... ...++..+.++|+|||.|++..+
T Consensus 99 ------~~~~~~D~v~~~~~~---~~~~~~~------~~~~l~~~~~~L~~gG~l~~~~~ 143 (227)
T 1ve3_A 99 ------FEDKTFDYVIFIDSI---VHFEPLE------LNQVFKEVRRVLKPSGKFIMYFT 143 (227)
T ss_dssp ------SCTTCEEEEEEESCG---GGCCHHH------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ------CCCCcEEEEEEcCch---HhCCHHH------HHHHHHHHHHHcCCCcEEEEEec
Confidence 345689999998531 1122111 24567888999999999998665
No 128
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=98.95 E-value=1.1e-09 Score=92.08 Aligned_cols=114 Identities=12% Similarity=0.119 Sum_probs=82.3
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCCcEEEecCccChhhH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~gV~~i~gDIt~~~t~ 108 (316)
.++.+|||+|||+|.++..+++ . ..+|+++|+++.+ .+++++++++|+.+.
T Consensus 34 ~~~~~vLdiG~G~G~~~~~l~~--~-------------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~--- 95 (183)
T 2yxd_A 34 NKDDVVVDVGCGSGGMTVEIAK--R-------------CKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDV--- 95 (183)
T ss_dssp CTTCEEEEESCCCSHHHHHHHT--T-------------SSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHH---
T ss_pred CCCCEEEEeCCCCCHHHHHHHh--c-------------CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCcccc---
Confidence 5678999999999999999987 2 3699999999831 236789999998762
Q ss_pred HHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCCCHHHHHHHHHhcCCceE
Q 021161 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFFPVVT 188 (316)
Q Consensus 109 ~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~~~~~l~~~l~~~F~~V~ 188 (316)
+..++||+|++++. ++. ...+..+.++ |||.|++..........+...++..-..+.
T Consensus 96 ------~~~~~~D~i~~~~~------~~~---------~~~l~~~~~~--~gG~l~~~~~~~~~~~~~~~~l~~~g~~~~ 152 (183)
T 2yxd_A 96 ------LDKLEFNKAFIGGT------KNI---------EKIIEILDKK--KINHIVANTIVLENAAKIINEFESRGYNVD 152 (183)
T ss_dssp ------GGGCCCSEEEECSC------SCH---------HHHHHHHHHT--TCCEEEEEESCHHHHHHHHHHHHHTTCEEE
T ss_pred ------ccCCCCcEEEECCc------ccH---------HHHHHHHhhC--CCCEEEEEecccccHHHHHHHHHHcCCeEE
Confidence 23368999999864 221 2345555666 999999977665566677777777644565
Q ss_pred EecCCC
Q 021161 189 FAKPKS 194 (316)
Q Consensus 189 ~~KP~s 194 (316)
...+..
T Consensus 153 ~~~~~~ 158 (183)
T 2yxd_A 153 AVNVFI 158 (183)
T ss_dssp EEEEEE
T ss_pred EEEeee
Confidence 554433
No 129
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.95 E-value=1.2e-09 Score=91.73 Aligned_cols=114 Identities=19% Similarity=0.248 Sum_probs=83.3
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC------CCCCcEEEecCccChhhHHHHHh
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIR 113 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~------~i~gV~~i~gDIt~~~t~~~I~~ 113 (316)
.++.+|||+|||+|.++..++++. .+|+++|+++.+ ..++++++++| .
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~---------------~~v~~vD~s~~~~~~a~~~~~~v~~~~~d---~-------- 69 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFA---------------TKLYCIDINVIALKEVKEKFDSVITLSDP---K-------- 69 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTE---------------EEEEEECSCHHHHHHHHHHCTTSEEESSG---G--------
T ss_pred CCCCeEEEECCCCCHHHHHHHhhc---------------CeEEEEeCCHHHHHHHHHhCCCcEEEeCC---C--------
Confidence 577899999999999999998764 389999999842 15689999999 1
Q ss_pred hcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCC------------CHHHHHHHHH
Q 021161 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK------------DTSLLYCQLK 181 (316)
Q Consensus 114 ~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~------------~~~~l~~~l~ 181 (316)
.+..++||+|+|..... ..+. ...++..+.++|||||.|++..+... ....+...++
T Consensus 70 ~~~~~~~D~v~~~~~l~-----~~~~------~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 138 (170)
T 3i9f_A 70 EIPDNSVDFILFANSFH-----DMDD------KQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS 138 (170)
T ss_dssp GSCTTCEEEEEEESCST-----TCSC------HHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT
T ss_pred CCCCCceEEEEEccchh-----cccC------HHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh
Confidence 14557899999986432 1211 13567888999999999999866432 2455666666
Q ss_pred hcCCceEEec
Q 021161 182 LFFPVVTFAK 191 (316)
Q Consensus 182 ~~F~~V~~~K 191 (316)
-|+.+.+..
T Consensus 139 -Gf~~~~~~~ 147 (170)
T 3i9f_A 139 -NFVVEKRFN 147 (170)
T ss_dssp -TEEEEEEEC
T ss_pred -CcEEEEccC
Confidence 676666544
No 130
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=98.95 E-value=2.4e-09 Score=97.36 Aligned_cols=93 Identities=17% Similarity=0.094 Sum_probs=70.4
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCCcEEEecCccChhhH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~gV~~i~gDIt~~~t~ 108 (316)
.++.+|||+|||+|.++..++...+ +.+|++||+++.+ .+.+|+++++|+.+...
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~-------------~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~- 144 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRP-------------ELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAR- 144 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCT-------------TCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTT-
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCC-------------CCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhc-
Confidence 4678999999999999999998753 5799999999842 35679999999876421
Q ss_pred HHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEE
Q 021161 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (316)
Q Consensus 109 ~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~ 165 (316)
.....++||+|+|.... ++ ...+..+.++|||||.|++
T Consensus 145 ----~~~~~~~fD~I~s~a~~------~~---------~~ll~~~~~~LkpgG~l~~ 182 (249)
T 3g89_A 145 ----EAGHREAYARAVARAVA------PL---------CVLSELLLPFLEVGGAAVA 182 (249)
T ss_dssp ----STTTTTCEEEEEEESSC------CH---------HHHHHHHGGGEEEEEEEEE
T ss_pred ----ccccCCCceEEEECCcC------CH---------HHHHHHHHHHcCCCeEEEE
Confidence 00113689999997521 11 2457788999999999987
No 131
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.95 E-value=1.1e-09 Score=97.06 Aligned_cols=111 Identities=11% Similarity=0.058 Sum_probs=79.0
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC------CCCCcEEEecCccChhhHHHHH
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVI 112 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~------~i~gV~~i~gDIt~~~t~~~I~ 112 (316)
+.++.+|||+|||+|.++..++++ + .+|+++|+++.+ ..++++++++|+.+.-
T Consensus 46 ~~~~~~vLDiGcG~G~~~~~l~~~-~--------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~------ 104 (226)
T 3m33_A 46 LTPQTRVLEAGCGHGPDAARFGPQ-A--------------ARWAAYDFSPELLKLARANAPHADVYEWNGKGEL------ 104 (226)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGG-S--------------SEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSC------
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHc-C--------------CEEEEEECCHHHHHHHHHhCCCceEEEcchhhcc------
Confidence 367899999999999999999875 2 599999999842 2568999999996421
Q ss_pred hhcC-CccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCCCHHHHHHHHHhc-CCceEE
Q 021161 113 RHFD-GCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLF-FPVVTF 189 (316)
Q Consensus 113 ~~~~-~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~~~~~l~~~l~~~-F~~V~~ 189 (316)
.+. .++||+|+|.. +.. .++..+.++|||||.|+ ..........+...+... |..+.+
T Consensus 105 -~~~~~~~fD~v~~~~--------~~~---------~~l~~~~~~LkpgG~l~-~~~~~~~~~~~~~~l~~~Gf~~~~~ 164 (226)
T 3m33_A 105 -PAGLGAPFGLIVSRR--------GPT---------SVILRLPELAAPDAHFL-YVGPRLNVPEVPERLAAVGWDIVAE 164 (226)
T ss_dssp -CTTCCCCEEEEEEES--------CCS---------GGGGGHHHHEEEEEEEE-EEESSSCCTHHHHHHHHTTCEEEEE
T ss_pred -CCcCCCCEEEEEeCC--------CHH---------HHHHHHHHHcCCCcEEE-EeCCcCCHHHHHHHHHHCCCeEEEE
Confidence 133 57899999972 122 33567889999999999 233333445566655543 655444
No 132
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=98.95 E-value=1.9e-09 Score=96.08 Aligned_cols=107 Identities=8% Similarity=0.020 Sum_probs=75.2
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCC-----------CCCCCcEEEecCccChhhH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-----------APIEGVIQVQGDITNARTA 108 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~-----------~~i~gV~~i~gDIt~~~t~ 108 (316)
+++.+|||||||+|.++..++++.+ +..|+|||+++. ..+.+|.++++|+.+.
T Consensus 33 ~~~~~vLDiGcG~G~~~~~lA~~~p-------------~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~--- 96 (218)
T 3dxy_A 33 REAPVTLEIGFGMGASLVAMAKDRP-------------EQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEV--- 96 (218)
T ss_dssp SCCCEEEEESCTTCHHHHHHHHHCT-------------TSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHH---
T ss_pred CCCCeEEEEeeeChHHHHHHHHHCC-------------CCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHH---
Confidence 4678999999999999999998763 578999999983 1356899999998763
Q ss_pred HHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEE
Q 021161 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (316)
Q Consensus 109 ~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Ki 167 (316)
+...+..+++|.|++..+.... ...+....-+....+..+.++|||||.|++.+
T Consensus 97 --l~~~~~~~~~d~v~~~~~~p~~---~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~t 150 (218)
T 3dxy_A 97 --LHKMIPDNSLRMVQLFFPDPWH---KARHNKRRIVQVPFAELVKSKLQLGGVFHMAT 150 (218)
T ss_dssp --HHHHSCTTCEEEEEEESCCCCC---SGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEE
T ss_pred --HHHHcCCCChheEEEeCCCCcc---chhhhhhhhhhHHHHHHHHHHcCCCcEEEEEe
Confidence 1123667899999997532111 00000000001245788899999999999866
No 133
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.94 E-value=2.4e-09 Score=94.37 Aligned_cols=98 Identities=15% Similarity=0.208 Sum_probs=73.0
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC------CCCCcEEEecCccChhhHHHHHh
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIR 113 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~------~i~gV~~i~gDIt~~~t~~~I~~ 113 (316)
.++.+|||+|||+|.++..++++. .+|+++|+++.+ ..+++.++++|+.+..
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~---------------~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~------- 96 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEF---------------GDTAGLELSEDMLTHARKRLPDATLHQGDMRDFR------- 96 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHH---------------SEEEEEESCHHHHHHHHHHCTTCEEEECCTTTCC-------
T ss_pred CCCCeEEEecccCCHHHHHHHHhC---------------CcEEEEeCCHHHHHHHHHhCCCCEEEECCHHHcc-------
Confidence 678899999999999999999875 389999998832 2467999999998753
Q ss_pred hcCCccccEEEeCC-CCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEcc
Q 021161 114 HFDGCKADLVVCDG-APDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (316)
Q Consensus 114 ~~~~~~~DlVvsDg-apdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~ 169 (316)
+ .++||+|+|.. ... |..+. .-...++..+.++|+|||.|++..+.
T Consensus 97 -~-~~~~D~v~~~~~~~~----~~~~~----~~~~~~l~~~~~~L~pgG~l~~~~~~ 143 (239)
T 3bxo_A 97 -L-GRKFSAVVSMFSSVG----YLKTT----EELGAAVASFAEHLEPGGVVVVEPWW 143 (239)
T ss_dssp -C-SSCEEEEEECTTGGG----GCCSH----HHHHHHHHHHHHTEEEEEEEEECCCC
T ss_pred -c-CCCCcEEEEcCchHh----hcCCH----HHHHHHHHHHHHhcCCCeEEEEEecc
Confidence 2 46899999743 111 11111 11346688889999999999986543
No 134
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.94 E-value=4e-09 Score=92.42 Aligned_cols=97 Identities=12% Similarity=0.091 Sum_probs=70.2
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCC---------------CCCCCcEEEecCccC
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM---------------APIEGVIQVQGDITN 104 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~---------------~~i~gV~~i~gDIt~ 104 (316)
+++.+|||+|||+|.++..++++. +..+|+|||+++. ..+++++++++|+.+
T Consensus 26 ~~~~~vLDiGcG~G~~~~~la~~~-------------p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~ 92 (218)
T 3mq2_A 26 QYDDVVLDVGTGDGKHPYKVARQN-------------PSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAER 92 (218)
T ss_dssp TSSEEEEEESCTTCHHHHHHHHHC-------------TTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTT
T ss_pred cCCCEEEEecCCCCHHHHHHHHHC-------------CCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhh
Confidence 678899999999999999999875 2579999999984 124578999999998
Q ss_pred hhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHH---HHHHHHHHHcccCCcEEEEEE
Q 021161 105 ARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLI---LAGLTVVTHVLKEGGKFIAKI 167 (316)
Q Consensus 105 ~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~---~aaL~~a~~vLkpGG~fV~Ki 167 (316)
.+ +.... |.|....+. ... ....+ ..++..+.++|||||.|++.+
T Consensus 93 l~--------~~~~~-d~v~~~~~~--------~~~-~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 93 LP--------PLSGV-GELHVLMPW--------GSL-LRGVLGSSPEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp CC--------SCCCE-EEEEEESCC--------HHH-HHHHHTSSSHHHHHHHHTEEEEEEEEEEE
T ss_pred CC--------CCCCC-CEEEEEccc--------hhh-hhhhhccHHHHHHHHHHHcCCCcEEEEEe
Confidence 54 33344 777743321 000 00011 466888999999999999854
No 135
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.94 E-value=3.4e-09 Score=92.52 Aligned_cols=108 Identities=16% Similarity=0.158 Sum_probs=80.8
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCCCCCcEEEecCccChhhHHHHHhhcCCcc
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCK 119 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~i~gV~~i~gDIt~~~t~~~I~~~~~~~~ 119 (316)
.++.+|||+|||+|.++..++ .+|+++|+++. ++.++++|+.+.. +..++
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~------------------~~v~~~D~s~~----~~~~~~~d~~~~~--------~~~~~ 115 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR------------------NPVHCFDLASL----DPRVTVCDMAQVP--------LEDES 115 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC------------------SCEEEEESSCS----STTEEESCTTSCS--------CCTTC
T ss_pred CCCCeEEEECCcCCHHHHHhh------------------ccEEEEeCCCC----CceEEEeccccCC--------CCCCC
Confidence 577899999999999887662 47999999987 6788899998743 44578
Q ss_pred ccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccC--CCHHHHHHHHHhc-CCceEE
Q 021161 120 ADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG--KDTSLLYCQLKLF-FPVVTF 189 (316)
Q Consensus 120 ~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~--~~~~~l~~~l~~~-F~~V~~ 189 (316)
||+|+|.... |..+ ...++..+.++|+|||.+++..+.. .....+...++.. |+.+..
T Consensus 116 fD~v~~~~~l-----~~~~-------~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 176 (215)
T 2zfu_A 116 VDVAVFCLSL-----MGTN-------IRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKLGFKIVSK 176 (215)
T ss_dssp EEEEEEESCC-----CSSC-------HHHHHHHHHHHEEEEEEEEEEECGGGCSCHHHHHHHHHHTTEEEEEE
T ss_pred EeEEEEehhc-----cccC-------HHHHHHHHHHhCCCCeEEEEEEcCCCCCCHHHHHHHHHHCCCEEEEE
Confidence 9999997543 2222 1356788899999999999976643 3566777777664 665553
No 136
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.94 E-value=4.5e-09 Score=98.33 Aligned_cols=143 Identities=17% Similarity=0.074 Sum_probs=95.6
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC---------------CCCCcEEEecCccC
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------------PIEGVIQVQGDITN 104 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~---------------~i~gV~~i~gDIt~ 104 (316)
.++.+|||||||+|+++..+++.. +..+|++||+++.. ..++++++.+|+.+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~-------------~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~ 160 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHG-------------TVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLA 160 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCT-------------TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCC-------------CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHH
Confidence 567899999999999999998653 24699999999731 12578999999875
Q ss_pred hhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHH-HHHHHHHHHcccCCcEEEEEEccC----CCHHHHHHH
Q 021161 105 ARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLI-LAGLTVVTHVLKEGGKFIAKIFRG----KDTSLLYCQ 179 (316)
Q Consensus 105 ~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~-~aaL~~a~~vLkpGG~fV~Kif~~----~~~~~l~~~ 179 (316)
.. .....++||+|++|... ..+. . ..|. ...+..+.++|||||.|++..-.. .....+...
T Consensus 161 ~~------~~~~~~~fDvIi~d~~~-~~~~---~----~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~ 226 (304)
T 3bwc_A 161 FV------RQTPDNTYDVVIIDTTD-PAGP---A----SKLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRF 226 (304)
T ss_dssp HH------HSSCTTCEEEEEEECC-----------------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHH
T ss_pred HH------HhccCCceeEEEECCCC-cccc---c----hhhhHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHH
Confidence 31 11135789999998632 1110 1 1111 456788999999999999965332 134557777
Q ss_pred HHhc-CCceEEec-CCCCCCCCcceEEEEecc
Q 021161 180 LKLF-FPVVTFAK-PKSSRNSSIEAFAVCENY 209 (316)
Q Consensus 180 l~~~-F~~V~~~K-P~sSR~~S~E~fvVc~gf 209 (316)
++.. |..|.++. +..+..+..-.|++|..-
T Consensus 227 l~~~GF~~v~~~~~~vP~yp~g~w~f~~as~~ 258 (304)
T 3bwc_A 227 IRETGFASVQYALMHVPTYPCGSIGTLVCSKK 258 (304)
T ss_dssp HHHHTCSEEEEEECCCTTSTTSCCEEEEEESS
T ss_pred HHhCCCCcEEEEEeecccccCcceEEEEEeCC
Confidence 8888 99887764 223333334468888653
No 137
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=98.93 E-value=1.4e-09 Score=99.43 Aligned_cols=115 Identities=20% Similarity=0.211 Sum_probs=83.0
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CC-CCcEEEecCccChhh
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i-~gV~~i~gDIt~~~t 107 (316)
.++.+|||+|||+|.++..++++++ +..+|+++|+++.+ .+ ++++++++|+.+.
T Consensus 111 ~~~~~VLDiG~G~G~~~~~la~~~~------------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-- 176 (277)
T 1o54_A 111 KEGDRIIDTGVGSGAMCAVLARAVG------------SSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG-- 176 (277)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHTT------------TTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC--
T ss_pred CCCCEEEEECCcCCHHHHHHHHHhC------------CCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc--
Confidence 5778999999999999999999864 35799999998832 12 4688999998763
Q ss_pred HHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCCCHHHHHHHHHhc-CCc
Q 021161 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLF-FPV 186 (316)
Q Consensus 108 ~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~~~~~l~~~l~~~-F~~ 186 (316)
+..++||+|++|.. + . ..++..+.++|+|||.|++..........+...++.. |..
T Consensus 177 -------~~~~~~D~V~~~~~-~------~---------~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~gf~~ 233 (277)
T 1o54_A 177 -------FDEKDVDALFLDVP-D------P---------WNYIDKCWEALKGGGRFATVCPTTNQVQETLKKLQELPFIR 233 (277)
T ss_dssp -------CSCCSEEEEEECCS-C------G---------GGTHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHSSEEE
T ss_pred -------ccCCccCEEEECCc-C------H---------HHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCce
Confidence 34468999999852 1 1 1346778899999999999765433444555555543 655
Q ss_pred eEEec
Q 021161 187 VTFAK 191 (316)
Q Consensus 187 V~~~K 191 (316)
+.+.+
T Consensus 234 ~~~~~ 238 (277)
T 1o54_A 234 IEVWE 238 (277)
T ss_dssp EEEEC
T ss_pred eEEEE
Confidence 55543
No 138
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.93 E-value=6.6e-09 Score=98.69 Aligned_cols=106 Identities=16% Similarity=0.055 Sum_probs=78.4
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCCcEEEecCccChhhH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~gV~~i~gDIt~~~t~ 108 (316)
+++.+|||+|||+|.++..++...+ +..+|+|+|+++.+ .+.+++++++|+++..
T Consensus 202 ~~~~~vLD~gcGsG~~~ie~a~~~~------------~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~-- 267 (354)
T 3tma_A 202 RPGMRVLDPFTGSGTIALEAASTLG------------PTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLP-- 267 (354)
T ss_dssp CTTCCEEESSCTTSHHHHHHHHHHC------------TTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGG--
T ss_pred CCCCEEEeCCCCcCHHHHHHHHhhC------------CCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCc--
Confidence 5788999999999999999998763 24789999999832 2347899999999854
Q ss_pred HHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEc
Q 021161 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (316)
Q Consensus 109 ~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif 168 (316)
.....||+|+||.+. |.+..+......+....+..+.++|+|||.+++-+.
T Consensus 268 ------~~~~~~D~Ii~npPy---g~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~ 318 (354)
T 3tma_A 268 ------RFFPEVDRILANPPH---GLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL 318 (354)
T ss_dssp ------GTCCCCSEEEECCCS---CC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEES
T ss_pred ------cccCCCCEEEECCCC---cCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 223568999999743 322222222344556778899999999999999654
No 139
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=98.92 E-value=3.3e-09 Score=94.74 Aligned_cols=94 Identities=19% Similarity=0.184 Sum_probs=70.9
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CC-CCcEEEecCccChhh
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i-~gV~~i~gDIt~~~t 107 (316)
.++.+|||+|||+|.++..+++.. +..+|+++|+++.+ .+ ++|+++++|+.+..
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~-------------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~- 135 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASIS-------------DDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQF- 135 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTC-------------TTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCH-
T ss_pred cCCCEEEEEeCchhHHHHHHHHhC-------------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHH-
Confidence 467899999999999999998844 25799999999831 23 37999999998642
Q ss_pred HHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEE
Q 021161 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (316)
Q Consensus 108 ~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~K 166 (316)
. ..+ .++||+|++|+... . ....+..+.++|||||.|++-
T Consensus 136 -~---~~~-~~~fD~V~~~~~~~-----~---------~~~~l~~~~~~LkpgG~lv~d 175 (232)
T 3ntv_A 136 -E---NVN-DKVYDMIFIDAAKA-----Q---------SKKFFEIYTPLLKHQGLVITD 175 (232)
T ss_dssp -H---HHT-TSCEEEEEEETTSS-----S---------HHHHHHHHGGGEEEEEEEEEE
T ss_pred -H---hhc-cCCccEEEEcCcHH-----H---------HHHHHHHHHHhcCCCeEEEEe
Confidence 1 012 46899999996421 1 134577888999999999883
No 140
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=98.92 E-value=1.2e-09 Score=95.65 Aligned_cols=97 Identities=11% Similarity=0.064 Sum_probs=68.3
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CC--CCcEEEecCccChhh
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI--EGVIQVQGDITNART 107 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i--~gV~~i~gDIt~~~t 107 (316)
++.+|||||||+|.++..++++. ..+|+|||+++.+ .+ ++++++++|+.+..
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~--------------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~- 117 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQ--------------AKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFL- 117 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT--------------CSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHT-
T ss_pred CCCeEEEcCCccCHHHHHHHHcc--------------CCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHH-
Confidence 67899999999999999877653 2589999999832 23 57899999987531
Q ss_pred HHHHHhhcCCcc-ccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHH--HHcccCCcEEEEEEcc
Q 021161 108 AEVVIRHFDGCK-ADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVV--THVLKEGGKFIAKIFR 169 (316)
Q Consensus 108 ~~~I~~~~~~~~-~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a--~~vLkpGG~fV~Kif~ 169 (316)
..+..++ ||+|++|.+.. .... ..++..+ .++|+|||.|++....
T Consensus 118 -----~~~~~~~~fD~I~~~~~~~------~~~~------~~~l~~~~~~~~LkpgG~l~i~~~~ 165 (201)
T 2ift_A 118 -----KQPQNQPHFDVVFLDPPFH------FNLA------EQAISLLCENNWLKPNALIYVETEK 165 (201)
T ss_dssp -----TSCCSSCCEEEEEECCCSS------SCHH------HHHHHHHHHTTCEEEEEEEEEEEES
T ss_pred -----HhhccCCCCCEEEECCCCC------CccH------HHHHHHHHhcCccCCCcEEEEEECC
Confidence 1122467 99999996521 1111 2233344 6789999999986643
No 141
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.92 E-value=1.8e-09 Score=95.12 Aligned_cols=94 Identities=17% Similarity=0.157 Sum_probs=71.5
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC---------C-------CCCcEEEecCc
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------P-------IEGVIQVQGDI 102 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~---------~-------i~gV~~i~gDI 102 (316)
++++.+|||+|||+|.++..+++.++ +.++|+++|+++.. . ..++.++++|+
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~------------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 142 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVG------------CTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDG 142 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHC------------TTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCG
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhC------------CCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCc
Confidence 46789999999999999999999874 34699999999731 1 34789999998
Q ss_pred cChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEcc
Q 021161 103 TNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (316)
Q Consensus 103 t~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~ 169 (316)
+... ....+||+|+++.... .. +..+.++|||||.|++.+..
T Consensus 143 ~~~~--------~~~~~fD~i~~~~~~~-----~~------------~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 143 RMGY--------AEEAPYDAIHVGAAAP-----VV------------PQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp GGCC--------GGGCCEEEEEECSBBS-----SC------------CHHHHHTEEEEEEEEEEESC
T ss_pred ccCc--------ccCCCcCEEEECCchH-----HH------------HHHHHHhcCCCcEEEEEEec
Confidence 7532 1235799999987531 11 23567899999999997653
No 142
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.92 E-value=2.1e-09 Score=97.16 Aligned_cols=96 Identities=17% Similarity=0.187 Sum_probs=75.1
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC------CCCCcEEEecCccChhhHHHHHh
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIR 113 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~------~i~gV~~i~gDIt~~~t~~~I~~ 113 (316)
.++.+|||+|||+|.++..+++.++ +.+|+++|+++.+ ..+++.++++|+.+.+
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~-------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~------- 143 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALP-------------EITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLP------- 143 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCT-------------TSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCS-------
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCC-------------CCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCC-------
Confidence 5788999999999999999998762 3699999999842 2467889999998753
Q ss_pred hcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCCCHH
Q 021161 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTS 174 (316)
Q Consensus 114 ~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~~~~ 174 (316)
+..++||+|++...+. .+..+.++|||||.|++.........
T Consensus 144 -~~~~~fD~v~~~~~~~------------------~l~~~~~~L~pgG~l~~~~~~~~~~~ 185 (269)
T 1p91_A 144 -FSDTSMDAIIRIYAPC------------------KAEELARVVKPGGWVITATPGPRHLM 185 (269)
T ss_dssp -BCTTCEEEEEEESCCC------------------CHHHHHHHEEEEEEEEEEEECTTTTH
T ss_pred -CCCCceeEEEEeCChh------------------hHHHHHHhcCCCcEEEEEEcCHHHHH
Confidence 4457899999965421 25678899999999999877655443
No 143
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.92 E-value=1.5e-09 Score=95.02 Aligned_cols=99 Identities=14% Similarity=0.101 Sum_probs=72.0
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCC-----CcEEEecCcc
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-----GVIQVQGDIT 103 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~-----gV~~i~gDIt 103 (316)
.++.+|||+|||+|.++..++++.+ ..+|+|+|+++.+ .+. +++++++|+.
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~-------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 94 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKS-------------FEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLV 94 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTT-------------CCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSS
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCC-------------CCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccc
Confidence 4678999999999999999987642 4699999999832 121 7999999997
Q ss_pred ChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEc
Q 021161 104 NARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (316)
Q Consensus 104 ~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif 168 (316)
... +..++||+|+|..... .++.. -...++..+.++|||||.|+....
T Consensus 95 ~~~--------~~~~~fD~V~~~~~l~-----~~~~~----~~~~~l~~~~~~LkpgG~~i~~~~ 142 (219)
T 3jwg_A 95 YRD--------KRFSGYDAATVIEVIE-----HLDEN----RLQAFEKVLFEFTRPQTVIVSTPN 142 (219)
T ss_dssp SCC--------GGGTTCSEEEEESCGG-----GCCHH----HHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred ccc--------cccCCCCEEEEHHHHH-----hCCHH----HHHHHHHHHHHhhCCCEEEEEccc
Confidence 643 2346899999975432 12211 124567888999999997776544
No 144
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.92 E-value=3.4e-09 Score=94.74 Aligned_cols=97 Identities=16% Similarity=0.073 Sum_probs=73.9
Q ss_pred CcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----------CCCCcEEEecCccChhh
Q 021161 38 IFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNART 107 (316)
Q Consensus 38 ~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----------~i~gV~~i~gDIt~~~t 107 (316)
.+.++.+|||+|||+|.++..++++ ..+|+|+|+++.+ ..+++.++++|+.+..
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~---------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~- 99 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIAR---------------GYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIP- 99 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTT---------------TCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCC-
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHC---------------CCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCC-
Confidence 3567899999999999999998864 2589999999831 1468999999998753
Q ss_pred HHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEcc
Q 021161 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (316)
Q Consensus 108 ~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~ 169 (316)
+..++||+|+|..... .... ...++..+.++|||||.|++. +.
T Consensus 100 -------~~~~~fD~v~~~~~l~-----~~~~------~~~~l~~~~~~L~pgG~l~~~-~~ 142 (263)
T 2yqz_A 100 -------LPDESVHGVIVVHLWH-----LVPD------WPKVLAEAIRVLKPGGALLEG-WD 142 (263)
T ss_dssp -------SCTTCEEEEEEESCGG-----GCTT------HHHHHHHHHHHEEEEEEEEEE-EE
T ss_pred -------CCCCCeeEEEECCchh-----hcCC------HHHHHHHHHHHCCCCcEEEEE-ec
Confidence 4457899999975432 1211 135678889999999999986 44
No 145
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.91 E-value=3.6e-09 Score=96.61 Aligned_cols=94 Identities=16% Similarity=0.063 Sum_probs=71.1
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCCcEEEecCccChhhHH
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTAE 109 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~gV~~i~gDIt~~~t~~ 109 (316)
++.+|||+|||+|.++..++++. .+|+|+|+++.+ .+ +++++++|+.+..
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g---------------~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~--- 180 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLG---------------YDVTSWDHNENSIAFLNETKEKENL-NISTALYDINAAN--- 180 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTT---------------CEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCGGGCC---
T ss_pred CCCcEEEECCCCCHHHHHHHHCC---------------CeEEEEECCHHHHHHHHHHHHHcCC-ceEEEEecccccc---
Confidence 67899999999999999998762 589999999842 12 7899999998753
Q ss_pred HHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEc
Q 021161 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (316)
Q Consensus 110 ~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif 168 (316)
+ .++||+|+|...... .+.. ....++..+.++|+|||.|++-.+
T Consensus 181 -----~-~~~fD~i~~~~~~~~-----~~~~----~~~~~l~~~~~~LkpgG~l~i~~~ 224 (286)
T 3m70_A 181 -----I-QENYDFIVSTVVFMF-----LNRE----RVPSIIKNMKEHTNVGGYNLIVAA 224 (286)
T ss_dssp -----C-CSCEEEEEECSSGGG-----SCGG----GHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred -----c-cCCccEEEEccchhh-----CCHH----HHHHHHHHHHHhcCCCcEEEEEEe
Confidence 2 578999999874321 1111 124567888999999999887543
No 146
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.91 E-value=4e-09 Score=101.93 Aligned_cols=125 Identities=15% Similarity=0.078 Sum_probs=82.1
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCC--CcEEEecCccChh
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE--GVIQVQGDITNAR 106 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~--gV~~i~gDIt~~~ 106 (316)
.++.+|||||||+|+++..++++. ..+|+|||+++.+ .+. +++++++|+.+.
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~g--------------a~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~- 275 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGG--------------AMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDY- 275 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTT--------------BSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHH-
T ss_pred cCCCeEEEEeeccCHHHHHHHHCC--------------CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHH-
Confidence 577899999999999999998752 2489999999953 244 789999998763
Q ss_pred hHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCC-CHHHHHHHHHhcC
Q 021161 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK-DTSLLYCQLKLFF 184 (316)
Q Consensus 107 t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~-~~~~l~~~l~~~F 184 (316)
+..+. ..+.+||+|++|.+.-..+...... ..+.....+..+.++|+|||.+++.+.... ....+...++..+
T Consensus 276 -l~~~~--~~~~~fD~Ii~DPP~~~~~~~~~~~--~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~i~~~~ 349 (385)
T 2b78_A 276 -FKYAR--RHHLTYDIIIIDPPSFARNKKEVFS--VSKDYHKLIRQGLEILSENGLIIASTNAANMTVSQFKKQIEKGF 349 (385)
T ss_dssp -HHHHH--HTTCCEEEEEECCCCC-----CCCC--HHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred -HHHHH--HhCCCccEEEECCCCCCCChhhHHH--HHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHH
Confidence 11111 1245899999996431111111111 112234556788999999999998776543 3445555555433
No 147
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=98.90 E-value=3.9e-09 Score=91.80 Aligned_cols=89 Identities=16% Similarity=0.239 Sum_probs=69.1
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCCcEEEecCccChhhH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~gV~~i~gDIt~~~t~ 108 (316)
+++.+|||+|||+|.++..+++. . .+|+++|+++.. .+.+++++++|+.+..
T Consensus 76 ~~~~~vLdiG~G~G~~~~~la~~-~--------------~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-- 138 (210)
T 3lbf_A 76 TPQSRVLEIGTGSGYQTAILAHL-V--------------QHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGW-- 138 (210)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH-S--------------SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC--
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh-C--------------CEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCC--
Confidence 67889999999999999999987 2 699999999831 2457999999998742
Q ss_pred HHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEc
Q 021161 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (316)
Q Consensus 109 ~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif 168 (316)
...++||+|++++... ...+ .+.++|||||.|++.+-
T Consensus 139 ------~~~~~~D~i~~~~~~~-----~~~~------------~~~~~L~pgG~lv~~~~ 175 (210)
T 3lbf_A 139 ------QARAPFDAIIVTAAPP-----EIPT------------ALMTQLDEGGILVLPVG 175 (210)
T ss_dssp ------GGGCCEEEEEESSBCS-----SCCT------------HHHHTEEEEEEEEEEEC
T ss_pred ------ccCCCccEEEEccchh-----hhhH------------HHHHhcccCcEEEEEEc
Confidence 1246899999997542 1221 35789999999999664
No 148
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.90 E-value=5.8e-09 Score=100.94 Aligned_cols=118 Identities=19% Similarity=0.147 Sum_probs=84.2
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCC----------CCCcEEEecCccChhhHHH
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----------IEGVIQVQGDITNARTAEV 110 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~----------i~gV~~i~gDIt~~~t~~~ 110 (316)
++.+|||||||+|.++..++++. .+|++||+++.+- -..++++++|+.+..
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~g---------------~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~---- 293 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARMG---------------AEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEAL---- 293 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHTT---------------CEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTS----
T ss_pred CCCEEEEEeeeCCHHHHHHHHcC---------------CEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhcc----
Confidence 67899999999999999998752 5999999998530 124789999998753
Q ss_pred HHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCCCHHHHHHHHHhcCCceEEe
Q 021161 111 VIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFFPVVTFA 190 (316)
Q Consensus 111 I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~~~~~l~~~l~~~F~~V~~~ 190 (316)
...++||+|+||......+ .... ......+..+.++|||||.|++.+.+..... ..+...|..+...
T Consensus 294 ----~~~~~fD~Ii~npp~~~~~-~~~~-----~~~~~~l~~~~~~LkpGG~l~iv~n~~l~~~---~~l~~~f~~v~~l 360 (381)
T 3dmg_A 294 ----TEEARFDIIVTNPPFHVGG-AVIL-----DVAQAFVNVAAARLRPGGVFFLVSNPFLKYE---PLLEEKFGAFQTL 360 (381)
T ss_dssp ----CTTCCEEEEEECCCCCTTC-SSCC-----HHHHHHHHHHHHHEEEEEEEEEEECTTSCHH---HHHHHHHSCCEEE
T ss_pred ----ccCCCeEEEEECCchhhcc-cccH-----HHHHHHHHHHHHhcCcCcEEEEEEcCCCChH---HHHHHhhccEEEE
Confidence 2346899999997543222 1112 1234667889999999999999765554443 3445557666665
No 149
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.90 E-value=4.4e-09 Score=100.13 Aligned_cols=95 Identities=14% Similarity=0.189 Sum_probs=70.2
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----------CCCC-cEEEecCccChhhH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEG-VIQVQGDITNARTA 108 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----------~i~g-V~~i~gDIt~~~t~ 108 (316)
.++.+|||||||+|.++..++++ + ..+|+|||+++|. .+.+ |+++++|+.+..
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~-g-------------~~~v~gvD~s~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~-- 128 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKA-G-------------ARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVE-- 128 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHT-T-------------CSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCC--
T ss_pred CCCCEEEEEeccchHHHHHHHHC-C-------------CCEEEEECcHHHHHHHHHHHHHcCCCCcEEEEECcHHHcc--
Confidence 46789999999999999999886 2 3599999999742 1333 899999998853
Q ss_pred HHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEE
Q 021161 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFI 164 (316)
Q Consensus 109 ~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV 164 (316)
++.++||+|+|+..... ++... .....+..+.++|||||.|+
T Consensus 129 ------~~~~~fD~Iis~~~~~~--l~~~~------~~~~~l~~~~r~LkpgG~li 170 (349)
T 3q7e_A 129 ------LPVEKVDIIISEWMGYC--LFYES------MLNTVLHARDKWLAPDGLIF 170 (349)
T ss_dssp ------CSSSCEEEEEECCCBBT--BTBTC------CHHHHHHHHHHHEEEEEEEE
T ss_pred ------CCCCceEEEEEcccccc--ccCch------hHHHHHHHHHHhCCCCCEEc
Confidence 44579999999853221 11111 12355677789999999997
No 150
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.90 E-value=4.4e-09 Score=95.37 Aligned_cols=99 Identities=14% Similarity=0.156 Sum_probs=71.3
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CC-CCcEEEecCccChhh
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i-~gV~~i~gDIt~~~t 107 (316)
.++.+|||+|||+|.++..+++.++ ++++|+++|+++.. .+ .+|++++||..+.
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~------------~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~-- 143 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIP------------EDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPV-- 143 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSC------------TTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHH--
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCC------------CCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHH--
Confidence 4668999999999999999999874 35799999999842 12 3588999998652
Q ss_pred HHHHHhh-cCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEE
Q 021161 108 AEVVIRH-FDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (316)
Q Consensus 108 ~~~I~~~-~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~K 166 (316)
+..+... +..++||+|++|+.. ..+ ...+..+.++|||||.|++-
T Consensus 144 l~~l~~~~~~~~~fD~V~~d~~~--------~~~------~~~l~~~~~~LkpGG~lv~d 189 (247)
T 1sui_A 144 LDEMIKDEKNHGSYDFIFVDADK--------DNY------LNYHKRLIDLVKVGGVIGYD 189 (247)
T ss_dssp HHHHHHSGGGTTCBSEEEECSCS--------TTH------HHHHHHHHHHBCTTCCEEEE
T ss_pred HHHHHhccCCCCCEEEEEEcCch--------HHH------HHHHHHHHHhCCCCeEEEEe
Confidence 1111110 013689999999642 111 34567788999999999974
No 151
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.89 E-value=4.2e-09 Score=93.64 Aligned_cols=110 Identities=16% Similarity=0.107 Sum_probs=78.0
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CC-CCcEEEecCccChhh
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i-~gV~~i~gDIt~~~t 107 (316)
.++.+|||+|||+|.++..++++ . .+|+++|+++.+ .+ ++++++++|+.+..
T Consensus 90 ~~~~~vldiG~G~G~~~~~l~~~-~--------------~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~- 153 (248)
T 2yvl_A 90 NKEKRVLEFGTGSGALLAVLSEV-A--------------GEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAE- 153 (248)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH-S--------------SEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSC-
T ss_pred CCCCEEEEeCCCccHHHHHHHHh-C--------------CEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcc-
Confidence 57889999999999999999987 3 689999999831 23 57889999998631
Q ss_pred HHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCCCHHHHHHHHHhcCCce
Q 021161 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFFPVV 187 (316)
Q Consensus 108 ~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~~~~~l~~~l~~~F~~V 187 (316)
+.++.||+|+++.. +. ..++..+.++|+|||.+++.+........+...++..|..+
T Consensus 154 -------~~~~~~D~v~~~~~-------~~---------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~f~~~ 210 (248)
T 2yvl_A 154 -------VPEGIFHAAFVDVR-------EP---------WHYLEKVHKSLMEGAPVGFLLPTANQVIKLLESIENYFGNL 210 (248)
T ss_dssp -------CCTTCBSEEEECSS-------CG---------GGGHHHHHHHBCTTCEEEEEESSHHHHHHHHHHSTTTEEEE
T ss_pred -------cCCCcccEEEECCc-------CH---------HHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCcc
Confidence 14568999999742 11 13467788999999999996653333344444444334333
Q ss_pred E
Q 021161 188 T 188 (316)
Q Consensus 188 ~ 188 (316)
.
T Consensus 211 ~ 211 (248)
T 2yvl_A 211 E 211 (248)
T ss_dssp E
T ss_pred e
Confidence 3
No 152
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.89 E-value=5.6e-09 Score=96.75 Aligned_cols=101 Identities=17% Similarity=0.093 Sum_probs=73.1
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCC-CcEEEecCccChh
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITNAR 106 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~-gV~~i~gDIt~~~ 106 (316)
+.++.+|||+|||+|.++..++.... +..+|+++|+++.+ .+. +++++++|+.+..
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~------------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 183 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSAC------------PGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLD 183 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTC------------TTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcC------------CCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCC
Confidence 46889999999999999988853322 35799999999832 122 3889999998753
Q ss_pred hHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEc
Q 021161 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (316)
Q Consensus 107 t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif 168 (316)
+. ++||+|+|++... |..+.. .....+..+.++|||||.|++..+
T Consensus 184 --------~~-~~fD~v~~~~~~~----~~~~~~----~~~~~l~~~~~~LkpgG~l~i~~~ 228 (305)
T 3ocj_A 184 --------TR-EGYDLLTSNGLNI----YEPDDA----RVTELYRRFWQALKPGGALVTSFL 228 (305)
T ss_dssp --------CC-SCEEEEECCSSGG----GCCCHH----HHHHHHHHHHHHEEEEEEEEEECC
T ss_pred --------cc-CCeEEEEECChhh----hcCCHH----HHHHHHHHHHHhcCCCeEEEEEec
Confidence 34 7899999976321 212221 123457888999999999998663
No 153
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.89 E-value=5.7e-09 Score=92.04 Aligned_cols=95 Identities=26% Similarity=0.287 Sum_probs=69.5
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC------C----CCCcEEEecCccChhhHHH
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------P----IEGVIQVQGDITNARTAEV 110 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~------~----i~gV~~i~gDIt~~~t~~~ 110 (316)
++.+|||+|||+|.++..++++. .+|+++|+++.+ . -.++.++++|+.+..
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~~---------------~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~---- 97 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPKF---------------KNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLN---- 97 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGGS---------------SEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCC----
T ss_pred CCCeEEEeCCCCCHHHHHHHHCC---------------CcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCC----
Confidence 67899999999999999888652 589999999732 0 116899999998753
Q ss_pred HHhhcCCccccEEEeCC-CCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEE
Q 021161 111 VIRHFDGCKADLVVCDG-APDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (316)
Q Consensus 111 I~~~~~~~~~DlVvsDg-apdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Ki 167 (316)
+. ++||+|+|.. ... |-.+. .-...+|..+.++|+|||.|++.+
T Consensus 98 ----~~-~~fD~v~~~~~~l~----~~~~~----~~~~~~l~~~~~~L~pgG~l~~~~ 142 (246)
T 1y8c_A 98 ----IN-RKFDLITCCLDSTN----YIIDS----DDLKKYFKAVSNHLKEGGVFIFDI 142 (246)
T ss_dssp ----CS-CCEEEEEECTTGGG----GCCSH----HHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred ----cc-CCceEEEEcCcccc----ccCCH----HHHHHHHHHHHHhcCCCcEEEEEe
Confidence 33 6899999974 321 11111 113466888899999999999843
No 154
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.89 E-value=5.4e-09 Score=96.92 Aligned_cols=131 Identities=14% Similarity=0.172 Sum_probs=85.2
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCC-cEEEecCccChhhH
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEG-VIQVQGDITNARTA 108 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~g-V~~i~gDIt~~~t~ 108 (316)
++.+|||||||+|.++..+++. + ..+|+|+|+++.+ .+.+ |+++++|+.+.-
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~-~-------------~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~-- 186 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKF-S-------------DAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPF-- 186 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHH-S-------------SCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGG--
T ss_pred CCCEEEEEeCchhHHHHHHHHC-C-------------CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhc--
Confidence 5679999999999999999987 4 3799999999842 2343 899999998731
Q ss_pred HHHHhhcCCccc---cEEEeCCCCCCCCC-------CCccHHHHHHHH-----HHHHHHHH-HcccCCcEEEEEEccCCC
Q 021161 109 EVVIRHFDGCKA---DLVVCDGAPDVTGL-------HDMDEFVQSQLI-----LAGLTVVT-HVLKEGGKFIAKIFRGKD 172 (316)
Q Consensus 109 ~~I~~~~~~~~~---DlVvsDgapdvtG~-------~~~de~~~~~L~-----~aaL~~a~-~vLkpGG~fV~Kif~~~~ 172 (316)
. ++| |+|+||.+.-..+. |... ..|. +..+..+. +.|+|||.|++.+ ....
T Consensus 187 -------~-~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~----~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~-~~~q 253 (284)
T 1nv8_A 187 -------K-EKFASIEMILSNPPYVKSSAHLPKDVLFEPP----EALFGGEDGLDFYREFFGRYDTSGKIVLMEI-GEDQ 253 (284)
T ss_dssp -------G-GGTTTCCEEEECCCCBCGGGSCTTSCCCSCH----HHHBCTTTSCHHHHHHHHHCCCTTCEEEEEC-CTTC
T ss_pred -------c-cccCCCCEEEEcCCCCCcccccChhhccCcH----HHhcCCCcHHHHHHHHHHhcCCCCCEEEEEE-CchH
Confidence 1 367 99999953211110 1111 0110 24567777 9999999999854 3333
Q ss_pred HHHHHHHHHhcCCceEEecCCCCCCCCcceEEEEec
Q 021161 173 TSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVCEN 208 (316)
Q Consensus 173 ~~~l~~~l~~~F~~V~~~KP~sSR~~S~E~fvVc~g 208 (316)
...+.. .|+...+.|..+.+ +++++++.
T Consensus 254 ~~~v~~----~~~~~~~~~D~~g~----~R~~~~~~ 281 (284)
T 1nv8_A 254 VEELKK----IVSDTVFLKDSAGK----YRFLLLNR 281 (284)
T ss_dssp HHHHTT----TSTTCEEEECTTSS----EEEEEEEC
T ss_pred HHHHHH----HHHhCCeecccCCC----ceEEEEEE
Confidence 333333 34333666666544 57776543
No 155
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.89 E-value=2.3e-08 Score=90.30 Aligned_cols=111 Identities=13% Similarity=0.116 Sum_probs=75.5
Q ss_pred HhhhHHcCCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCC------C-----------CC
Q 021161 30 LQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM------A-----------PI 92 (316)
Q Consensus 30 ~qId~~f~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~------~-----------~i 92 (316)
..+.+...+ .++.+|||+|||+|.++..++++.+ +..+|+++|+++. + .+
T Consensus 33 ~~l~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~g------------~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~ 99 (275)
T 3bkx_A 33 LAIAEAWQV-KPGEKILEIGCGQGDLSAVLADQVG------------SSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPL 99 (275)
T ss_dssp HHHHHHHTC-CTTCEEEEESCTTSHHHHHHHHHHC------------TTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTT
T ss_pred HHHHHHcCC-CCCCEEEEeCCCCCHHHHHHHHHhC------------CCCEEEEEECCccccccHHHHHHHHHHHHhcCC
Confidence 344444443 6788999999999999999999873 3479999999984 1 12
Q ss_pred -CCcEEEecC-ccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccC
Q 021161 93 -EGVIQVQGD-ITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG 170 (316)
Q Consensus 93 -~gV~~i~gD-It~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~ 170 (316)
++++++++| +..... .+..++||+|+|...... ..+. ...+.....+++|||.+++..+..
T Consensus 100 ~~~v~~~~~d~~~~~~~------~~~~~~fD~v~~~~~l~~----~~~~-------~~~~~~~~~l~~~gG~l~~~~~~~ 162 (275)
T 3bkx_A 100 GDRLTVHFNTNLSDDLG------PIADQHFDRVVLAHSLWY----FASA-------NALALLFKNMAAVCDHVDVAEWSM 162 (275)
T ss_dssp GGGEEEECSCCTTTCCG------GGTTCCCSEEEEESCGGG----SSCH-------HHHHHHHHHHTTTCSEEEEEEECS
T ss_pred CCceEEEECChhhhccC------CCCCCCEEEEEEccchhh----CCCH-------HHHHHHHHHHhCCCCEEEEEEecC
Confidence 468999998 432210 134578999999864321 1121 123455666777899999977653
No 156
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.89 E-value=4.1e-08 Score=94.47 Aligned_cols=122 Identities=20% Similarity=0.178 Sum_probs=82.6
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCC-C-CCcEEEecCccChhhHHHHHhhcCC
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-I-EGVIQVQGDITNARTAEVVIRHFDG 117 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~-i-~gV~~i~gDIt~~~t~~~I~~~~~~ 117 (316)
.++.+|||+|||+|+++..++++.. ...+|+|+|+++.+- + .++.++++|+.+.. ..
T Consensus 38 ~~~~~vLD~gcGtG~~~~~~~~~~~------------~~~~i~gvDi~~~~~~~a~~~~~~~~D~~~~~---------~~ 96 (421)
T 2ih2_A 38 PRGGRVLEPACAHGPFLRAFREAHG------------TAYRFVGVEIDPKALDLPPWAEGILADFLLWE---------PG 96 (421)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHHC------------SCSEEEEEESCTTTCCCCTTEEEEESCGGGCC---------CS
T ss_pred CCCCEEEECCCCChHHHHHHHHHhC------------CCCeEEEEECCHHHHHhCCCCcEEeCChhhcC---------cc
Confidence 3466999999999999999998873 246999999999642 2 57899999998642 23
Q ss_pred ccccEEEeCCCCCCCCCC-----CccHHHHH-------------HHHHHHHHHHHHcccCCcEEEEEEccC----CCHHH
Q 021161 118 CKADLVVCDGAPDVTGLH-----DMDEFVQS-------------QLILAGLTVVTHVLKEGGKFIAKIFRG----KDTSL 175 (316)
Q Consensus 118 ~~~DlVvsDgapdvtG~~-----~~de~~~~-------------~L~~aaL~~a~~vLkpGG~fV~Kif~~----~~~~~ 175 (316)
++||+|++|.+....+.. ..++.... .+....+..+.++|+|||.+++-+-.+ .....
T Consensus 97 ~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~~~~~~ 176 (421)
T 2ih2_A 97 EAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLEDFAL 176 (421)
T ss_dssp SCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTCGGGHH
T ss_pred CCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhcCccHHH
Confidence 689999999643322210 02121111 133466888999999999999866432 23445
Q ss_pred HHHHHHh
Q 021161 176 LYCQLKL 182 (316)
Q Consensus 176 l~~~l~~ 182 (316)
+...+..
T Consensus 177 lr~~l~~ 183 (421)
T 2ih2_A 177 LREFLAR 183 (421)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 5554433
No 157
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.89 E-value=4.4e-09 Score=99.90 Aligned_cols=124 Identities=14% Similarity=0.066 Sum_probs=80.4
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCC--CcEEEecCccChh
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE--GVIQVQGDITNAR 106 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~--gV~~i~gDIt~~~ 106 (316)
.++.+|||||||+|+++..+++.. .+|++||+++.+ .+. ++.++++|+.+..
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~g---------------a~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l 216 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAAG---------------AEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFI 216 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHTT---------------CEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHH
T ss_pred CCCCcEEEcccccCHHHHHHHHcC---------------CEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHH
Confidence 357899999999999999998742 499999999842 234 3899999997642
Q ss_pred hHHHHHhhcCCccccEEEeCCCCCCCCCC-CccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCC--CHHHHHHHHHhc
Q 021161 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLH-DMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK--DTSLLYCQLKLF 183 (316)
Q Consensus 107 t~~~I~~~~~~~~~DlVvsDgapdvtG~~-~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~--~~~~l~~~l~~~ 183 (316)
..... .+++||+|++|.+.-..+-. .... ........+..+.++|+|||.|++...... ....+...++..
T Consensus 217 --~~~~~--~~~~fD~Ii~dPP~~~~~~~~~~~~--~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~~~~~~l~~a 290 (332)
T 2igt_A 217 --QREER--RGSTYDIILTDPPKFGRGTHGEVWQ--LFDHLPLMLDICREILSPKALGLVLTAYSIRASFYSMHELMRET 290 (332)
T ss_dssp --HHHHH--HTCCBSEEEECCCSEEECTTCCEEE--HHHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCHHHHHHHHHHH
T ss_pred --HHHHh--cCCCceEEEECCccccCCchHHHHH--HHHHHHHHHHHHHHhcCcCcEEEEEECCCCCCCHHHHHHHHHHH
Confidence 11110 14689999999642111100 0111 112234567888999999999777554332 455566666654
Q ss_pred C
Q 021161 184 F 184 (316)
Q Consensus 184 F 184 (316)
+
T Consensus 291 ~ 291 (332)
T 2igt_A 291 M 291 (332)
T ss_dssp T
T ss_pred H
Confidence 4
No 158
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.89 E-value=7e-09 Score=96.73 Aligned_cols=142 Identities=14% Similarity=0.109 Sum_probs=92.5
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC--------C-------CCCcEEEecCccC
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------P-------IEGVIQVQGDITN 104 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~--------~-------i~gV~~i~gDIt~ 104 (316)
..+.+|||||||+|+++..++++.+ ..+|++||+++.. + .++++++++|+.+
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~-------------~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~ 155 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDS-------------VEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAE 155 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTT-------------CSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHH
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCC-------------CCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHH
Confidence 3568999999999999999887542 4699999999731 0 2578999999865
Q ss_pred hhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHH-HHHHHHHHHHcccCCcEEEEEEccCC----CHHHHHHH
Q 021161 105 ARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQL-ILAGLTVVTHVLKEGGKFIAKIFRGK----DTSLLYCQ 179 (316)
Q Consensus 105 ~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L-~~aaL~~a~~vLkpGG~fV~Kif~~~----~~~~l~~~ 179 (316)
.- .. ..++||+|++|......+.. ..| ....+..+.++|+|||.|++...... ....+...
T Consensus 156 ~l------~~-~~~~fD~Ii~d~~~~~~~~~-------~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~ 221 (296)
T 1inl_A 156 YV------RK-FKNEFDVIIIDSTDPTAGQG-------GHLFTEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRR 221 (296)
T ss_dssp HG------GG-CSSCEEEEEEEC-----------------CCSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHH
T ss_pred HH------hh-CCCCceEEEEcCCCcccCch-------hhhhHHHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHH
Confidence 21 11 24689999999632101110 011 14567788999999999999653321 23456677
Q ss_pred HHhcCCceEEec-CCCCCCCCcceEEEEec
Q 021161 180 LKLFFPVVTFAK-PKSSRNSSIEAFAVCEN 208 (316)
Q Consensus 180 l~~~F~~V~~~K-P~sSR~~S~E~fvVc~g 208 (316)
++..|..|..+. +..+-+...-.|++|..
T Consensus 222 l~~~F~~v~~~~~~vp~~p~g~~~f~~as~ 251 (296)
T 1inl_A 222 ISKVFPITRVYLGFMTTYPSGMWSYTFASK 251 (296)
T ss_dssp HHHHCSEEEEEEEECTTSTTSEEEEEEEES
T ss_pred HHHHCCceEEEEeecCccCCCceEEEEecC
Confidence 888899888764 11222233456888864
No 159
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.88 E-value=3.9e-09 Score=91.76 Aligned_cols=97 Identities=16% Similarity=0.218 Sum_probs=73.2
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC------CCCCcEEEecCccChhhHHHHHh
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIR 113 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~------~i~gV~~i~gDIt~~~t~~~I~~ 113 (316)
.++.+|||+|||+|.++..+ + ..+|+++|+++.+ ..+++.++++|+.+.+
T Consensus 35 ~~~~~vLdiG~G~G~~~~~l----~-------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~------- 90 (211)
T 2gs9_A 35 PPGESLLEVGAGTGYWLRRL----P-------------YPQKVGVEPSEAMLAVGRRRAPEATWVRAWGEALP------- 90 (211)
T ss_dssp CCCSEEEEETCTTCHHHHHC----C-------------CSEEEEECCCHHHHHHHHHHCTTSEEECCCTTSCC-------
T ss_pred CCCCeEEEECCCCCHhHHhC----C-------------CCeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCC-------
Confidence 47889999999999998776 2 1389999999832 1368899999998753
Q ss_pred hcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCCC
Q 021161 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKD 172 (316)
Q Consensus 114 ~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~~ 172 (316)
+..++||+|+|..... .... ...++..+.++|||||.+++.++....
T Consensus 91 -~~~~~fD~v~~~~~l~-----~~~~------~~~~l~~~~~~L~pgG~l~i~~~~~~~ 137 (211)
T 2gs9_A 91 -FPGESFDVVLLFTTLE-----FVED------VERVLLEARRVLRPGGALVVGVLEALS 137 (211)
T ss_dssp -SCSSCEEEEEEESCTT-----TCSC------HHHHHHHHHHHEEEEEEEEEEEECTTS
T ss_pred -CCCCcEEEEEEcChhh-----hcCC------HHHHHHHHHHHcCCCCEEEEEecCCcC
Confidence 4457899999986432 1221 135678889999999999998876543
No 160
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.88 E-value=5.1e-09 Score=100.81 Aligned_cols=110 Identities=19% Similarity=0.167 Sum_probs=78.3
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCCcEEEecCccChhhHH
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTAE 109 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~gV~~i~gDIt~~~t~~ 109 (316)
++.+|||+|||+|+++..+++. . .+|+|+|+++.+ .+.+++++++|+.+.. .
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~-~--------------~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~--~ 271 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG-F--------------REVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLL--R 271 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH-E--------------EEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHH--H
T ss_pred CCCeEEEeeeccCHHHHHHHHh-C--------------CEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHH--H
Confidence 6789999999999999999987 3 589999999842 2456899999987642 1
Q ss_pred HHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCC
Q 021161 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK 171 (316)
Q Consensus 110 ~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~ 171 (316)
.+. -.+.+||+|++|.+. .+....+...........+..+.++|+|||.|++......
T Consensus 272 ~~~--~~~~~fD~Ii~dpP~--~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 329 (382)
T 1wxx_A 272 RLE--KEGERFDLVVLDPPA--FAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHH 329 (382)
T ss_dssp HHH--HTTCCEEEEEECCCC--SCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred HHH--hcCCCeeEEEECCCC--CCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 111 124689999999642 2221122222234446678889999999999999876543
No 161
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=98.88 E-value=6.1e-09 Score=88.18 Aligned_cols=99 Identities=18% Similarity=0.176 Sum_probs=68.6
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CC-CCcEEEecCccChhh
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i-~gV~~i~gDIt~~~t 107 (316)
.++.+|||+|||+|.++..++++ + ..+|+|+|+++.+ .+ .++.++++|+.+.
T Consensus 30 ~~~~~vLDlGcG~G~~~~~l~~~-~-------------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-- 93 (177)
T 2esr_A 30 FNGGRVLDLFAGSGGLAIEAVSR-G-------------MSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERA-- 93 (177)
T ss_dssp CCSCEEEEETCTTCHHHHHHHHT-T-------------CCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHH--
T ss_pred cCCCeEEEeCCCCCHHHHHHHHc-C-------------CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHh--
Confidence 46789999999999999999875 2 3699999999832 12 3588999998763
Q ss_pred HHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHH--HHcccCCcEEEEEEccCC
Q 021161 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVV--THVLKEGGKFIAKIFRGK 171 (316)
Q Consensus 108 ~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a--~~vLkpGG~fV~Kif~~~ 171 (316)
...+. .+||+|++|.... .. .....+... .++|+|||.|++.+....
T Consensus 94 ----~~~~~-~~fD~i~~~~~~~------~~------~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 94 ----IDCLT-GRFDLVFLDPPYA------KE------TIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp ----HHHBC-SCEEEEEECCSSH------HH------HHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred ----HHhhc-CCCCEEEECCCCC------cc------hHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 11233 5699999985320 00 112223333 489999999999775543
No 162
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.88 E-value=5.4e-09 Score=91.12 Aligned_cols=107 Identities=21% Similarity=0.235 Sum_probs=75.6
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----CCCCcEEEecCccChhhHHHHHhhc
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNARTAEVVIRHF 115 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----~i~gV~~i~gDIt~~~t~~~I~~~~ 115 (316)
.++.+|||+|||+|.++..++++ + .+|+++|+++.+ .-....++++|+.+... .+
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~--------------~~~~~~D~~~~~~~~~~~~~~~~~~~d~~~~~~------~~ 89 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-G--------------TRVSGIEAFPEAAEQAKEKLDHVVLGDIETMDM------PY 89 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-T--------------CEEEEEESSHHHHHHHHTTSSEEEESCTTTCCC------CS
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-C--------------CeEEEEeCCHHHHHHHHHhCCcEEEcchhhcCC------CC
Confidence 57889999999999999998865 2 689999998832 11224778899876311 24
Q ss_pred CCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCCCHHHHHH
Q 021161 116 DGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYC 178 (316)
Q Consensus 116 ~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~~~~~l~~ 178 (316)
..++||+|+|..... |..+. ..++..+.++|+|||.+++.+........+..
T Consensus 90 ~~~~fD~v~~~~~l~----~~~~~-------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~ 141 (230)
T 3cc8_A 90 EEEQFDCVIFGDVLE----HLFDP-------WAVIEKVKPYIKQNGVILASIPNVSHISVLAP 141 (230)
T ss_dssp CTTCEEEEEEESCGG----GSSCH-------HHHHHHTGGGEEEEEEEEEEEECTTSHHHHHH
T ss_pred CCCccCEEEECChhh----hcCCH-------HHHHHHHHHHcCCCCEEEEEeCCcchHHHHHH
Confidence 457899999975432 11121 35678889999999999998766555444433
No 163
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.88 E-value=1.1e-08 Score=90.35 Aligned_cols=96 Identities=17% Similarity=0.188 Sum_probs=69.2
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----------CCCCcEEEecCccChhhH
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTA 108 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----------~i~gV~~i~gDIt~~~t~ 108 (316)
+.++.+|||+|||+|.++..++++ .+|+++|+++.+ .-.+++++++|+.+..
T Consensus 31 ~~~~~~vLdiG~G~G~~~~~l~~~----------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-- 92 (243)
T 3d2l_A 31 VEPGKRIADIGCGTGTATLLLADH----------------YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELE-- 92 (243)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT----------------SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCC--
T ss_pred cCCCCeEEEecCCCCHHHHHHhhC----------------CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcC--
Confidence 456789999999999999887653 489999999832 1146899999998743
Q ss_pred HHHHhhcCCccccEEEeCC-CCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEE
Q 021161 109 EVVIRHFDGCKADLVVCDG-APDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (316)
Q Consensus 109 ~~I~~~~~~~~~DlVvsDg-apdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Ki 167 (316)
+. ++||+|+|.. ... |-.+. .-...++..+.++|+|||.|++.+
T Consensus 93 ------~~-~~fD~v~~~~~~~~----~~~~~----~~~~~~l~~~~~~L~pgG~l~~~~ 137 (243)
T 3d2l_A 93 ------LP-EPVDAITILCDSLN----YLQTE----ADVKQTFDSAARLLTDGGKLLFDV 137 (243)
T ss_dssp ------CS-SCEEEEEECTTGGG----GCCSH----HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ------CC-CCcCEEEEeCCchh----hcCCH----HHHHHHHHHHHHhcCCCeEEEEEc
Confidence 23 6899999964 211 11111 123456788899999999999844
No 164
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=98.88 E-value=3.3e-09 Score=88.59 Aligned_cols=100 Identities=14% Similarity=0.123 Sum_probs=69.0
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCCcEEEecCccChhhHH
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTAE 109 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~gV~~i~gDIt~~~t~~ 109 (316)
++.+|||+|||+|.++..++++. ..|+|+|+++.+ .+ +++++++|+.+.. .
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~---------------~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~--~ 102 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEG---------------WEAVLVEKDPEAVRLLKENVRRTGL-GARVVALPVEVFL--P 102 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTT---------------CEEEEECCCHHHHHHHHHHHHHHTC-CCEEECSCHHHHH--H
T ss_pred CCCeEEEeCCCcCHHHHHHHHCC---------------CeEEEEeCCHHHHHHHHHHHHHcCC-ceEEEeccHHHHH--H
Confidence 67899999999999999998864 349999999842 12 7899999987631 1
Q ss_pred HHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCC
Q 021161 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK 171 (316)
Q Consensus 110 ~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~ 171 (316)
... -.+++||+|++++... .+..+. ...+.. .++|+|||.|++.+....
T Consensus 103 ~~~--~~~~~~D~i~~~~~~~----~~~~~~------~~~~~~-~~~L~~gG~~~~~~~~~~ 151 (171)
T 1ws6_A 103 EAK--AQGERFTVAFMAPPYA----MDLAAL------FGELLA-SGLVEAGGLYVLQHPKDL 151 (171)
T ss_dssp HHH--HTTCCEEEEEECCCTT----SCTTHH------HHHHHH-HTCEEEEEEEEEEEETTS
T ss_pred hhh--ccCCceEEEEECCCCc----hhHHHH------HHHHHh-hcccCCCcEEEEEeCCcc
Confidence 111 1234799999997532 222221 111222 599999999999776543
No 165
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.87 E-value=2.2e-09 Score=92.87 Aligned_cols=100 Identities=17% Similarity=0.096 Sum_probs=72.1
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----------CCCCcEEEecCccChhhHH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTAE 109 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----------~i~gV~~i~gDIt~~~t~~ 109 (316)
.++.+|||+|||+|.++..+.... +.+|+|+|+++.+ .-.++.++++|+.+.+
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~~--------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~--- 84 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVED--------------GYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLP--- 84 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHHT--------------TCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCC---
T ss_pred CCCCEEEEECCCCCHHHHHHHHhC--------------CCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCC---
Confidence 567899999999999854444433 3699999999832 1246889999998753
Q ss_pred HHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccC
Q 021161 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG 170 (316)
Q Consensus 110 ~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~ 170 (316)
+..++||+|+|..... .+.. .-...++..+.++|||||.|++..+..
T Consensus 85 -----~~~~~fD~v~~~~~l~-----~~~~----~~~~~~l~~~~~~LkpgG~l~~~~~~~ 131 (209)
T 2p8j_A 85 -----FKDESMSFVYSYGTIF-----HMRK----NDVKEAIDEIKRVLKPGGLACINFLTT 131 (209)
T ss_dssp -----SCTTCEEEEEECSCGG-----GSCH----HHHHHHHHHHHHHEEEEEEEEEEEEET
T ss_pred -----CCCCceeEEEEcChHH-----hCCH----HHHHHHHHHHHHHcCCCcEEEEEEecc
Confidence 4457899999975321 1211 113466788899999999999987754
No 166
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.87 E-value=9.7e-09 Score=91.65 Aligned_cols=96 Identities=26% Similarity=0.278 Sum_probs=70.1
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----------CCCCcEEEecCccChhhHH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTAE 109 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----------~i~gV~~i~gDIt~~~t~~ 109 (316)
.++.+|||||||+|.++..++++. .+|+|+|+++.+ .-.++.++++|+++..
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~~---------------~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~--- 101 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAERG---------------YEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIA--- 101 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHTT---------------CEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCC---
T ss_pred cCCCEEEEeCCCCCHHHHHHHHCC---------------CeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcc---
Confidence 567899999999999999998752 589999999732 0126899999998753
Q ss_pred HHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEE
Q 021161 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (316)
Q Consensus 110 ~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Ki 167 (316)
+ .++||+|+|..... .. ... .-...++..+.++|+|||.|++-+
T Consensus 102 -----~-~~~fD~v~~~~~~~--~~--~~~----~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 102 -----F-KNEFDAVTMFFSTI--MY--FDE----EDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp -----C-CSCEEEEEECSSGG--GG--SCH----HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -----c-CCCccEEEEcCCch--hc--CCH----HHHHHHHHHHHHHcCCCeEEEEec
Confidence 2 25799999864211 11 111 123566788899999999999854
No 167
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.87 E-value=6.4e-09 Score=97.77 Aligned_cols=150 Identities=17% Similarity=0.163 Sum_probs=98.3
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC--------C--------CCCcEEEecCcc
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------P--------IEGVIQVQGDIT 103 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~--------~--------i~gV~~i~gDIt 103 (316)
.++.+|||||||+|+++..++++. +..+|++||+++.. + .++++++.+|+.
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~-------------~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~ 142 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHP-------------TVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDAR 142 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTST-------------TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHH
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcC-------------CCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHH
Confidence 456899999999999999988754 24699999999731 1 257899999987
Q ss_pred ChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHH-HHHHHHHHHHcccCCcEEEEEEcc-----CCCHHHHH
Q 021161 104 NARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQL-ILAGLTVVTHVLKEGGKFIAKIFR-----GKDTSLLY 177 (316)
Q Consensus 104 ~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L-~~aaL~~a~~vLkpGG~fV~Kif~-----~~~~~~l~ 177 (316)
+. +.. ..++||+|++|.... .+.....+ .| ....+..+.++|+|||.|++.... ......+.
T Consensus 143 ~~------l~~-~~~~fD~Ii~d~~~~-~~~~~~~~----~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~ 210 (314)
T 1uir_A 143 AY------LER-TEERYDVVIIDLTDP-VGEDNPAR----LLYTVEFYRLVKAHLNPGGVMGMQTGMILLTHHRVHPVVH 210 (314)
T ss_dssp HH------HHH-CCCCEEEEEEECCCC-BSTTCGGG----GGSSHHHHHHHHHTEEEEEEEEEEEEEECC---CHHHHHH
T ss_pred HH------HHh-cCCCccEEEECCCCc-ccccCcch----hccHHHHHHHHHHhcCCCcEEEEEccCccccCHHHHHHHH
Confidence 52 111 246899999996421 11001100 11 245678889999999999987532 23355677
Q ss_pred HHHHhcCCceEEec---CCCCCCCCcceEEEEecccCCCCCCC
Q 021161 178 CQLKLFFPVVTFAK---PKSSRNSSIEAFAVCENYFPPEGFNP 217 (316)
Q Consensus 178 ~~l~~~F~~V~~~K---P~sSR~~S~E~fvVc~gf~~p~~~~p 217 (316)
..++..|..|..+. |.. ...-.|++|..-..|..+.|
T Consensus 211 ~~l~~~F~~v~~~~~~vP~~---~g~~~~~~as~~~~p~~~~~ 250 (314)
T 1uir_A 211 RTVREAFRYVRSYKNHIPGF---FLNFGFLLASDAFDPAAFSE 250 (314)
T ss_dssp HHHHTTCSEEEEEEEEEGGG---TEEEEEEEEESSSCTTCCCT
T ss_pred HHHHHHCCceEEEEEecCCC---CCeEEEEEEECCCCcccCCH
Confidence 78888898887653 322 22335777765433444444
No 168
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=98.86 E-value=7.2e-09 Score=98.40 Aligned_cols=95 Identities=16% Similarity=0.199 Sum_probs=71.1
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----------CC-CCcEEEecCccChhhH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PI-EGVIQVQGDITNARTA 108 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----------~i-~gV~~i~gDIt~~~t~ 108 (316)
.++.+|||||||+|.++..++++. ..+|+|+|+++|. .+ ++++++++|+.+..
T Consensus 63 ~~~~~VLDiGcGtG~ls~~la~~g--------------~~~v~gvD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-- 126 (340)
T 2fyt_A 63 FKDKVVLDVGCGTGILSMFAAKAG--------------AKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVH-- 126 (340)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHTT--------------CSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSC--
T ss_pred cCCCEEEEeeccCcHHHHHHHHcC--------------CCEEEEEChHHHHHHHHHHHHHcCCCCcEEEEEeeHHHhc--
Confidence 567899999999999999988752 2589999999852 12 57899999998753
Q ss_pred HHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEE
Q 021161 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFI 164 (316)
Q Consensus 109 ~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV 164 (316)
++.++||+|+|+..+.. +.... ....++..+.++|||||.|+
T Consensus 127 ------~~~~~~D~Ivs~~~~~~--l~~~~------~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 127 ------LPVEKVDVIISEWMGYF--LLFES------MLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp ------CSCSCEEEEEECCCBTT--BTTTC------HHHHHHHHHHHHEEEEEEEE
T ss_pred ------CCCCcEEEEEEcCchhh--ccCHH------HHHHHHHHHHhhcCCCcEEE
Confidence 44578999999864221 21111 12356777889999999998
No 169
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.86 E-value=4.6e-09 Score=94.37 Aligned_cols=99 Identities=16% Similarity=0.162 Sum_probs=71.7
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCC-CcEEEecCccChhh
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITNART 107 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~-gV~~i~gDIt~~~t 107 (316)
.+..+|||+|||+|.++..+++.++ ++++|+++|+++.. .+. .|++++||+.+.
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~------------~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~-- 134 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIP------------DDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLA-- 134 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSC------------TTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHH--
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCC------------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH--
Confidence 4678999999999999999999874 35799999999841 232 488999998652
Q ss_pred HHHHHhh-cCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEE
Q 021161 108 AEVVIRH-FDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (316)
Q Consensus 108 ~~~I~~~-~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~K 166 (316)
+..+... +..++||+|++|+.. ..+ ...+..+.++|+|||.+++-
T Consensus 135 l~~l~~~~~~~~~fD~I~~d~~~--------~~~------~~~l~~~~~~L~pGG~lv~d 180 (237)
T 3c3y_A 135 LDNLLQGQESEGSYDFGFVDADK--------PNY------IKYHERLMKLVKVGGIVAYD 180 (237)
T ss_dssp HHHHHHSTTCTTCEEEEEECSCG--------GGH------HHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHhccCCCCCcCEEEECCch--------HHH------HHHHHHHHHhcCCCeEEEEe
Confidence 1111111 114689999999632 111 34567788999999999985
No 170
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.86 E-value=7.2e-09 Score=95.81 Aligned_cols=138 Identities=17% Similarity=0.173 Sum_probs=91.2
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC---------------------CCCCcEEE
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------------------PIEGVIQV 98 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~---------------------~i~gV~~i 98 (316)
.++.+|||||||+|+++..++++ + ..+|++||+++.. ..++++++
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~-~-------------~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~ 139 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH-D-------------VDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLT 139 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS-C-------------CSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC-C-------------CCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEE
Confidence 45689999999999999988765 3 3699999998731 12468899
Q ss_pred ecCccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHH-HHHHHHHHHHcccCCcEEEEEEccC----CCH
Q 021161 99 QGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQL-ILAGLTVVTHVLKEGGKFIAKIFRG----KDT 173 (316)
Q Consensus 99 ~gDIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L-~~aaL~~a~~vLkpGG~fV~Kif~~----~~~ 173 (316)
.+|+.+. + .. .++||+|++|.. +..+. . ..+ ....+..+.++|+|||.|++..-.. ...
T Consensus 140 ~~D~~~~-----l-~~--~~~fD~Ii~d~~-~~~~~---~----~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~ 203 (281)
T 1mjf_A 140 IGDGFEF-----I-KN--NRGFDVIIADST-DPVGP---A----KVLFSEEFYRYVYDALNNPGIYVTQAGSVYLFTDEL 203 (281)
T ss_dssp ESCHHHH-----H-HH--CCCEEEEEEECC-CCC------------TTSHHHHHHHHHHEEEEEEEEEEEEETTTSHHHH
T ss_pred ECchHHH-----h-cc--cCCeeEEEECCC-CCCCc---c----hhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHH
Confidence 9998642 1 12 468999999964 21111 0 111 1355778889999999999875322 123
Q ss_pred HHHHHHHHhcCCceEEec-CCCCCCCCcceEEEEec
Q 021161 174 SLLYCQLKLFFPVVTFAK-PKSSRNSSIEAFAVCEN 208 (316)
Q Consensus 174 ~~l~~~l~~~F~~V~~~K-P~sSR~~S~E~fvVc~g 208 (316)
..+...++..|..+..+. +..+. ...-.|++|..
T Consensus 204 ~~~~~~l~~~f~~v~~~~~~vP~~-~g~~~~~~as~ 238 (281)
T 1mjf_A 204 ISAYKEMKKVFDRVYYYSFPVIGY-ASPWAFLVGVK 238 (281)
T ss_dssp HHHHHHHHHHCSEEEEEEECCTTS-SSSEEEEEEEE
T ss_pred HHHHHHHHHHCCceEEEEEecCCC-CceEEEEEeeC
Confidence 456677777898887654 22222 33356777765
No 171
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.86 E-value=2.3e-08 Score=92.29 Aligned_cols=140 Identities=14% Similarity=0.131 Sum_probs=93.1
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-------------C--CCCcEEEecCccCh
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-------------P--IEGVIQVQGDITNA 105 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-------------~--i~gV~~i~gDIt~~ 105 (316)
++.+|||||||.|+.+..++++. +..+|++||+++.. . .++++++.+|..+.
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~-------------~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~ 141 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHP-------------SVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMH 141 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCT-------------TCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHH
T ss_pred CCCEEEEECCchHHHHHHHHhCC-------------CCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHH
Confidence 56899999999999998887653 24699999999731 1 25789999998742
Q ss_pred hhHHHHHhhcCCccccEEEeCCCCCCCCCC-CccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCC----CHHHHHHHH
Q 021161 106 RTAEVVIRHFDGCKADLVVCDGAPDVTGLH-DMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK----DTSLLYCQL 180 (316)
Q Consensus 106 ~t~~~I~~~~~~~~~DlVvsDgapdvtG~~-~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~----~~~~l~~~l 180 (316)
+ .. ..++||+|++|.. +..+.. .+. ....+..+.++|+|||.|++....+. ....+...+
T Consensus 142 -----l-~~-~~~~fD~Ii~d~~-~~~~~~~~l~-------~~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l 206 (275)
T 1iy9_A 142 -----I-AK-SENQYDVIMVDST-EPVGPAVNLF-------TKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDV 206 (275)
T ss_dssp -----H-HT-CCSCEEEEEESCS-SCCSCCCCCS-------TTHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHH
T ss_pred -----H-hh-CCCCeeEEEECCC-CCCCcchhhh-------HHHHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHH
Confidence 1 11 2468999999964 221110 000 12346778899999999999754322 234566778
Q ss_pred HhcCCceEEec-CCCCCCCCcceEEEEec
Q 021161 181 KLFFPVVTFAK-PKSSRNSSIEAFAVCEN 208 (316)
Q Consensus 181 ~~~F~~V~~~K-P~sSR~~S~E~fvVc~g 208 (316)
+..|..|..+. ...+-.+..-.|++|..
T Consensus 207 ~~~F~~v~~~~~~vp~~~~g~w~~~~ask 235 (275)
T 1iy9_A 207 KEIFPITKLYTANIPTYPSGLWTFTIGSK 235 (275)
T ss_dssp HTTCSEEEEEEECCTTSGGGCEEEEEEES
T ss_pred HHhCCCeEEEEEecCcccCcceEEEEeeC
Confidence 88899888764 22222222345778764
No 172
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.85 E-value=1.3e-08 Score=97.90 Aligned_cols=95 Identities=15% Similarity=0.124 Sum_probs=69.7
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----------CC-CCcEEEecCccChhhH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PI-EGVIQVQGDITNARTA 108 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----------~i-~gV~~i~gDIt~~~t~ 108 (316)
.++.+|||||||+|.++..++++. ..+|+|||+++|. .+ ..|+++++|+.+..
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la~~g--------------~~~V~gvD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-- 125 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSAQAG--------------ARKVYAVEATKMADHARALVKANNLDHIVEVIEGSVEDIS-- 125 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHHHTT--------------CSEEEEEESSTTHHHHHHHHHHTTCTTTEEEEESCGGGCC--
T ss_pred CCCCEEEEeccCcCHHHHHHHhcC--------------CCEEEEEccHHHHHHHHHHHHHcCCCCeEEEEECchhhcC--
Confidence 567899999999999999998862 2499999999652 12 24899999998753
Q ss_pred HHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEE
Q 021161 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (316)
Q Consensus 109 ~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~ 165 (316)
++ ++||+|+|+....... +..+ ....+..+.++|||||.|+.
T Consensus 126 ------~~-~~~D~Iv~~~~~~~l~-~e~~-------~~~~l~~~~~~LkpgG~li~ 167 (376)
T 3r0q_C 126 ------LP-EKVDVIISEWMGYFLL-RESM-------FDSVISARDRWLKPTGVMYP 167 (376)
T ss_dssp ------CS-SCEEEEEECCCBTTBT-TTCT-------HHHHHHHHHHHEEEEEEEES
T ss_pred ------cC-CcceEEEEcChhhccc-chHH-------HHHHHHHHHhhCCCCeEEEE
Confidence 33 6899999986432211 1111 23456777899999999974
No 173
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.85 E-value=2.8e-09 Score=96.19 Aligned_cols=107 Identities=11% Similarity=0.035 Sum_probs=72.9
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCC-----------------CCCCCcEEEecCc
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-----------------APIEGVIQVQGDI 102 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~-----------------~~i~gV~~i~gDI 102 (316)
.++.+|||||||+|.++..+++..+ +..|+|||+++. ..+.+|.++++|+
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p-------------~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~ 111 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFP-------------DTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNA 111 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGST-------------TSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCT
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCC-------------CCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcH
Confidence 5667999999999999999988753 579999999862 1256899999999
Q ss_pred cChhhHHHHHhhcCCccccEEEeCCCCCC-CCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEc
Q 021161 103 TNARTAEVVIRHFDGCKADLVVCDGAPDV-TGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (316)
Q Consensus 103 t~~~t~~~I~~~~~~~~~DlVvsDgapdv-tG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif 168 (316)
.+. +...+..+++|.|++...... .-.|.... -.....+..+.++|||||.|++.+.
T Consensus 112 ~~~-----l~~~~~~~~~D~v~~~~~dp~~k~~h~krr----~~~~~~l~~~~~~LkpGG~l~~~td 169 (235)
T 3ckk_A 112 MKH-----LPNFFYKGQLTKMFFLFPDPHFKRTKHKWR----IISPTLLAEYAYVLRVGGLVYTITD 169 (235)
T ss_dssp TTC-----HHHHCCTTCEEEEEEESCC---------------CCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred HHh-----hhhhCCCcCeeEEEEeCCCchhhhhhhhhh----hhhHHHHHHHHHHCCCCCEEEEEeC
Confidence 862 112356678999998642111 00000000 0013567888999999999998653
No 174
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.85 E-value=5.8e-09 Score=95.31 Aligned_cols=105 Identities=17% Similarity=0.186 Sum_probs=72.8
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC---------------CCCCcEEEecCccC
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------------PIEGVIQVQGDITN 104 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~---------------~i~gV~~i~gDIt~ 104 (316)
.++.+|||||||+|.|+..++++. .+|+|+|+++.+ ...++.+..+|+.+
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~~---------------~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~ 120 (293)
T 3thr_A 56 HGCHRVLDVACGTGVDSIMLVEEG---------------FSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLT 120 (293)
T ss_dssp TTCCEEEETTCTTSHHHHHHHHTT---------------CEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGG
T ss_pred cCCCEEEEecCCCCHHHHHHHHCC---------------CeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhh
Confidence 467899999999999999998752 599999999832 12467788999887
Q ss_pred hhhHHHHHhhcCCccccEEEeCC-CCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEc
Q 021161 105 ARTAEVVIRHFDGCKADLVVCDG-APDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (316)
Q Consensus 105 ~~t~~~I~~~~~~~~~DlVvsDg-apdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif 168 (316)
... +.+..++||+|+|.| ... |-.+.+...+....++..+.++|||||.|++.+.
T Consensus 121 ~~~-----~~~~~~~fD~V~~~g~~l~----~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 121 LDK-----DVPAGDGFDAVICLGNSFA----HLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp HHH-----HSCCTTCEEEEEECTTCGG----GSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred Ccc-----ccccCCCeEEEEEcChHHh----hcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 531 114567999999974 221 1111000001124668889999999999998664
No 175
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.85 E-value=2.7e-09 Score=101.17 Aligned_cols=102 Identities=19% Similarity=0.176 Sum_probs=76.8
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CC-CCcEEEecCccChh
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNAR 106 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i-~gV~~i~gDIt~~~ 106 (316)
+.++.+|||||||+|.++.. ++ + ..+|+|+|+++.+ .+ .+++++++|+.+.
T Consensus 193 ~~~~~~VLDlg~G~G~~~l~-a~--~-------------~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~- 255 (336)
T 2yx1_A 193 VSLNDVVVDMFAGVGPFSIA-CK--N-------------AKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREV- 255 (336)
T ss_dssp CCTTCEEEETTCTTSHHHHH-TT--T-------------SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGC-
T ss_pred cCCCCEEEEccCccCHHHHh-cc--C-------------CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHh-
Confidence 35789999999999999988 65 2 3699999999842 23 4689999999863
Q ss_pred hHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCCCHHHHHHHHHhc
Q 021161 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLF 183 (316)
Q Consensus 107 t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~~~~~l~~~l~~~ 183 (316)
+ .+||+|++|..... ...+..+.++|+|||.+++..+... ...+...++..
T Consensus 256 --------~--~~fD~Vi~dpP~~~---------------~~~l~~~~~~L~~gG~l~~~~~~~~-~~~~~~~l~~~ 306 (336)
T 2yx1_A 256 --------D--VKGNRVIMNLPKFA---------------HKFIDKALDIVEEGGVIHYYTIGKD-FDKAIKLFEKK 306 (336)
T ss_dssp --------C--CCEEEEEECCTTTG---------------GGGHHHHHHHEEEEEEEEEEEEESS-SHHHHHHHHHH
T ss_pred --------c--CCCcEEEECCcHhH---------------HHHHHHHHHHcCCCCEEEEEEeecC-chHHHHHHHHh
Confidence 1 68999999963321 1346677899999999998777665 55566666654
No 176
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.85 E-value=1.1e-09 Score=99.73 Aligned_cols=128 Identities=15% Similarity=0.123 Sum_probs=80.6
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------C--C--------------
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------P--I-------------- 92 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~--i-------------- 92 (316)
.++.+|||||||+|.++..++... ..+|+|+|+++.+ + +
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~~--------------~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~ 119 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACDS--------------FQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEG 119 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGGT--------------EEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTT
T ss_pred CCCceEEEeCCCccHHHHHHHHhh--------------hcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCC
Confidence 467899999999998776554332 1379999999721 0 0
Q ss_pred -------------CCcE-EEecCccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHccc
Q 021161 93 -------------EGVI-QVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLK 158 (316)
Q Consensus 93 -------------~gV~-~i~gDIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLk 158 (316)
.++. ++++|+++.... ......+||+|+|........ .+.+. ...++..+.++||
T Consensus 120 ~~~~~~~~~~~~~~~i~~~~~~D~~~~~~~----~~~~~~~fD~V~~~~~l~~i~-~~~~~------~~~~l~~i~r~LK 188 (263)
T 2a14_A 120 NSGRWEEKEEKLRAAVKRVLKCDVHLGNPL----APAVLPLADCVLTLLAMECAC-CSLDA------YRAALCNLASLLK 188 (263)
T ss_dssp CGGGHHHHHHHHHHHEEEEEECCTTSSSTT----TTCCCCCEEEEEEESCHHHHC-SSHHH------HHHHHHHHHTTEE
T ss_pred CCcchhhHHHHHHhhhheEEeccccCCCCC----CccccCCCCEeeehHHHHHhc-CCHHH------HHHHHHHHHHHcC
Confidence 0122 788999874210 011235899999986432100 01111 2467888999999
Q ss_pred CCcEEEEEEccC---------------CCHHHHHHHHHhc-CCceEEecC
Q 021161 159 EGGKFIAKIFRG---------------KDTSLLYCQLKLF-FPVVTFAKP 192 (316)
Q Consensus 159 pGG~fV~Kif~~---------------~~~~~l~~~l~~~-F~~V~~~KP 192 (316)
|||.|++..... .....+...|... |+.+.+..+
T Consensus 189 PGG~li~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~l~~aGF~i~~~~~~ 238 (263)
T 2a14_A 189 PGGHLVTTVTLRLPSYMVGKREFSCVALEKGEVEQAVLDAGFDIEQLLHS 238 (263)
T ss_dssp EEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred CCcEEEEEEeecCccceeCCeEeeccccCHHHHHHHHHHCCCEEEEEeec
Confidence 999999875321 1455677777665 776666543
No 177
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=98.85 E-value=5.1e-09 Score=88.84 Aligned_cols=103 Identities=14% Similarity=0.065 Sum_probs=69.7
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CC-CCcEEEecCccChhh
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i-~gV~~i~gDIt~~~t 107 (316)
.++.+|||+|||+|.++..++++. ..+|+|+|+++.+ .+ ++++++++|+.+...
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~~--------------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 108 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSRG--------------MDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALE 108 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHTT--------------CSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHH
T ss_pred cCCCCEEEeCCccCHHHHHHHHcC--------------CCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHH
Confidence 467899999999999999887742 3689999999842 12 368999999876321
Q ss_pred HHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccC
Q 021161 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG 170 (316)
Q Consensus 108 ~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~ 170 (316)
.+ .+..++||+|++|.... ....... ...+ .+.++|+|||.|++.+...
T Consensus 109 --~~--~~~~~~fD~i~~~~~~~---~~~~~~~------~~~l-~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 109 --QF--YEEKLQFDLVLLDPPYA---KQEIVSQ------LEKM-LERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp --HH--HHTTCCEEEEEECCCGG---GCCHHHH------HHHH-HHTTCEEEEEEEEEEEETT
T ss_pred --HH--HhcCCCCCEEEECCCCC---chhHHHH------HHHH-HHhcccCCCCEEEEEeCCc
Confidence 11 12246899999986421 1111111 1122 2378999999999876544
No 178
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.85 E-value=9.2e-09 Score=100.74 Aligned_cols=104 Identities=13% Similarity=0.151 Sum_probs=74.0
Q ss_pred hhhHHcCCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC------------------CC
Q 021161 31 QIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------------------PI 92 (316)
Q Consensus 31 qId~~f~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~------------------~i 92 (316)
++.+..+ ++++.+|||||||+|..+..++...+ ..+|+|||+++.+ .+
T Consensus 164 ~il~~l~-l~~gd~VLDLGCGtG~l~l~lA~~~g-------------~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl 229 (438)
T 3uwp_A 164 QMIDEIK-MTDDDLFVDLGSGVGQVVLQVAAATN-------------CKHHYGVEKADIPAKYAETMDREFRKWMKWYGK 229 (438)
T ss_dssp HHHHHHC-CCTTCEEEEESCTTSHHHHHHHHHCC-------------CSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTB
T ss_pred HHHHhcC-CCCCCEEEEeCCCCCHHHHHHHHHCC-------------CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 3444443 36889999999999999999988753 2479999999620 12
Q ss_pred --CCcEEEecCccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEE
Q 021161 93 --EGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (316)
Q Consensus 93 --~gV~~i~gDIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~K 166 (316)
.+|++++||+++.+... .+ ..||+|+++... + ... ...+|....++|||||.||+.
T Consensus 230 ~~~rVefi~GD~~~lp~~d----~~--~~aDVVf~Nn~~-----F--~pd-----l~~aL~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 230 KHAEYTLERGDFLSEEWRE----RI--ANTSVIFVNNFA-----F--GPE-----VDHQLKERFANMKEGGRIVSS 287 (438)
T ss_dssp CCCEEEEEECCTTSHHHHH----HH--HTCSEEEECCTT-----C--CHH-----HHHHHHHHHTTSCTTCEEEES
T ss_pred CCCCeEEEECcccCCcccc----cc--CCccEEEEcccc-----c--Cch-----HHHHHHHHHHcCCCCcEEEEe
Confidence 56899999999976321 12 369999997531 1 111 234566778999999999975
No 179
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.85 E-value=2e-08 Score=92.48 Aligned_cols=108 Identities=15% Similarity=0.161 Sum_probs=76.9
Q ss_pred CCCeEEEECCCC---CHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC---------CCCCcEEEecCccChhhH
Q 021161 41 GVKRVVDLCAAP---GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTA 108 (316)
Q Consensus 41 ~~~rVLDLcagP---G~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~---------~i~gV~~i~gDIt~~~t~ 108 (316)
+..+|||||||+ |.++..+.+.. ++.+|++||+++.+ ..++++++++|+++....
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~-------------p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~ 143 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVN-------------PDARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYI 143 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHC-------------TTCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhC-------------CCCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhh
Confidence 457999999999 99887776654 35799999999831 235799999999986432
Q ss_pred ---HHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccC
Q 021161 109 ---EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG 170 (316)
Q Consensus 109 ---~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~ 170 (316)
..+.+.++..++|+|++.+.. |.+... -...+|..+.++|+|||.|++..+..
T Consensus 144 ~~~~~~~~~~d~~~~d~v~~~~vl-----h~~~d~----~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 144 LNHPDVRRMIDFSRPAAIMLVGML-----HYLSPD----VVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp HHSHHHHHHCCTTSCCEEEETTTG-----GGSCTT----THHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred hccchhhccCCCCCCEEEEEechh-----hhCCcH----HHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 111233544589999998643 222110 02356888999999999999988765
No 180
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.85 E-value=7.5e-09 Score=99.94 Aligned_cols=122 Identities=18% Similarity=0.166 Sum_probs=81.7
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCC-CcEEEecCccChhh
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITNART 107 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~-gV~~i~gDIt~~~t 107 (316)
+++.+|||||||+|.++..+++. + ..+|+|+|+++.+ .+. +++++++|+.+...
T Consensus 216 ~~~~~VLDl~~G~G~~~~~la~~-g-------------~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~ 281 (396)
T 2as0_A 216 QPGDRVLDVFTYTGGFAIHAAIA-G-------------ADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEME 281 (396)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT-T-------------CSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHH
T ss_pred hCCCeEEEecCCCCHHHHHHHHC-C-------------CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHH
Confidence 47899999999999999999875 2 2589999999842 233 68999999876421
Q ss_pred HHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCC-CHHHHHHHHH
Q 021161 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK-DTSLLYCQLK 181 (316)
Q Consensus 108 ~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~-~~~~l~~~l~ 181 (316)
.+. ..+.+||+|++|.+. .+....+-..........+..+.++|+|||.+++..+... ....+...+.
T Consensus 282 --~~~--~~~~~fD~Vi~dpP~--~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~v~ 350 (396)
T 2as0_A 282 --KLQ--KKGEKFDIVVLDPPA--FVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQHVDLQMFKDMII 350 (396)
T ss_dssp --HHH--HTTCCEEEEEECCCC--SCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTTSCHHHHHHHHH
T ss_pred --HHH--hhCCCCCEEEECCCC--CCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCCCCHHHHHHHHH
Confidence 111 124689999999632 1111112111223345678889999999999998776543 3333444333
No 181
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.84 E-value=4.7e-09 Score=98.23 Aligned_cols=107 Identities=15% Similarity=0.078 Sum_probs=71.1
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCC------CcEEEecCcc
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE------GVIQVQGDIT 103 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~------gV~~i~gDIt 103 (316)
++.+|||||||+|+.+..+++.. ...|+|+|+++.+ ... ++.+.++|+.
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~--------------~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~ 113 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGE--------------IALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIR 113 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTT--------------CSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTT
T ss_pred CCCeEEEEecCCcHhHHHHHhcC--------------CCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcc
Confidence 57899999999998665554432 3689999999842 011 2567788886
Q ss_pred ChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEcc
Q 021161 104 NARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (316)
Q Consensus 104 ~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~ 169 (316)
.......+.+.+..++||+|+|..+... ..+..+ ...+|..+.++|||||.|++.+..
T Consensus 114 ~d~~~~~l~~~~~~~~FD~V~~~~~lhy--~~~~~~------~~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 114 SDTFVSSVREVFYFGKFNIIDWQFAIHY--SFHPRH------YATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp SSSHHHHHHTTCCSSCEEEEEEESCGGG--TCSTTT------HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cchhhhhhhccccCCCeeEEEECchHHH--hCCHHH------HHHHHHHHHHHcCCCCEEEEEeCC
Confidence 5443333444455679999999754211 011111 146788999999999999987653
No 182
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.84 E-value=6.8e-09 Score=97.21 Aligned_cols=92 Identities=26% Similarity=0.290 Sum_probs=70.4
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCCcEEEecCccChhh
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNART 107 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~gV~~i~gDIt~~~t 107 (316)
++++.+|||+|||+|.++..++++.. ..++|+++|+++.+ .+.+++++++|+.+..
T Consensus 73 ~~~~~~VLDiGcG~G~~~~~la~~~~------------~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~- 139 (317)
T 1dl5_A 73 LDKGMRVLEIGGGTGYNAAVMSRVVG------------EKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGV- 139 (317)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHC------------TTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC-
T ss_pred CCCcCEEEEecCCchHHHHHHHHhcC------------CCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhcc-
Confidence 36789999999999999999998864 24689999999832 2467899999998632
Q ss_pred HHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEE
Q 021161 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (316)
Q Consensus 108 ~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Ki 167 (316)
...++||+|+++++... .. ..+.++|||||.+++.+
T Consensus 140 -------~~~~~fD~Iv~~~~~~~-----~~------------~~~~~~LkpgG~lvi~~ 175 (317)
T 1dl5_A 140 -------PEFSPYDVIFVTVGVDE-----VP------------ETWFTQLKEGGRVIVPI 175 (317)
T ss_dssp -------GGGCCEEEEEECSBBSC-----CC------------HHHHHHEEEEEEEEEEB
T ss_pred -------ccCCCeEEEEEcCCHHH-----HH------------HHHHHhcCCCcEEEEEE
Confidence 12357999999975431 11 24567999999999964
No 183
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.84 E-value=6.2e-09 Score=96.83 Aligned_cols=92 Identities=17% Similarity=0.096 Sum_probs=71.0
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCC-CcEEEecCccChh
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITNAR 106 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~-gV~~i~gDIt~~~ 106 (316)
+++|.+|||+|||+|.++..++++. ..+|+|+|++|.+ .+. .|+++++|..+.
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~g--------------~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~- 187 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVYG--------------KAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDF- 187 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHHT--------------CCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTC-
T ss_pred cCCCCEEEEecCcCcHHHHHHHHhc--------------CCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHh-
Confidence 5789999999999999999998764 3689999999953 233 478999998864
Q ss_pred hHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEc
Q 021161 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (316)
Q Consensus 107 t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif 168 (316)
.....||.|+.|..+.. .+ .|..|.++||+||.+.+-.|
T Consensus 188 --------~~~~~~D~Vi~~~p~~~------~~---------~l~~a~~~lk~gG~ih~~~~ 226 (278)
T 3k6r_A 188 --------PGENIADRILMGYVVRT------HE---------FIPKALSIAKDGAIIHYHNT 226 (278)
T ss_dssp --------CCCSCEEEEEECCCSSG------GG---------GHHHHHHHEEEEEEEEEEEE
T ss_pred --------ccccCCCEEEECCCCcH------HH---------HHHHHHHHcCCCCEEEEEee
Confidence 23568999999865432 12 25567789999999876555
No 184
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.83 E-value=7e-09 Score=89.52 Aligned_cols=97 Identities=19% Similarity=0.106 Sum_probs=71.6
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC------C----CCCcEEEecCccChhhH
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------P----IEGVIQVQGDITNARTA 108 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~------~----i~gV~~i~gDIt~~~t~ 108 (316)
+.++ +|||+|||+|.++..++++ +.+|+++|+++.+ . -.++.++++|+.+..
T Consensus 28 ~~~~-~vLdiGcG~G~~~~~l~~~---------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-- 89 (202)
T 2kw5_A 28 IPQG-KILCLAEGEGRNACFLASL---------------GYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFD-- 89 (202)
T ss_dssp SCSS-EEEECCCSCTHHHHHHHTT---------------TCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBS--
T ss_pred CCCC-CEEEECCCCCHhHHHHHhC---------------CCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcC--
Confidence 3566 9999999999999888764 2589999999732 0 127889999998753
Q ss_pred HHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccC
Q 021161 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG 170 (316)
Q Consensus 109 ~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~ 170 (316)
+..++||+|+|... +. .. .....++..+.++|+|||.|++..+..
T Consensus 90 ------~~~~~fD~v~~~~~------~~-~~----~~~~~~l~~~~~~L~pgG~l~~~~~~~ 134 (202)
T 2kw5_A 90 ------IVADAWEGIVSIFC------HL-PS----SLRQQLYPKVYQGLKPGGVFILEGFAP 134 (202)
T ss_dssp ------CCTTTCSEEEEECC------CC-CH----HHHHHHHHHHHTTCCSSEEEEEEEECT
T ss_pred ------CCcCCccEEEEEhh------cC-CH----HHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 34578999998421 21 11 113466788899999999999987643
No 185
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.83 E-value=3.8e-09 Score=97.81 Aligned_cols=141 Identities=16% Similarity=0.146 Sum_probs=92.6
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC--------C-------CCCcEEEecCccC
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------P-------IEGVIQVQGDITN 104 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~--------~-------i~gV~~i~gDIt~ 104 (316)
.++.+|||||||+|+++..+++.. +..+|++||+++.. + .++++++.+|+.+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~-------------~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~ 143 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYK-------------SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASK 143 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCT-------------TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHH
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcC-------------CCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHH
Confidence 456899999999999999988653 24699999999731 1 3578999999875
Q ss_pred hhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHH-HHHHHHHHHcccCCcEEEEEEccC----CCHHHHHHH
Q 021161 105 ARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLI-LAGLTVVTHVLKEGGKFIAKIFRG----KDTSLLYCQ 179 (316)
Q Consensus 105 ~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~-~aaL~~a~~vLkpGG~fV~Kif~~----~~~~~l~~~ 179 (316)
. .... .++||+|++|.. +..+. .+ .|. ...+..+.++|+|||.|++..... .....+...
T Consensus 144 ~------l~~~-~~~fD~Ii~d~~-~~~~~---~~----~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~ 208 (283)
T 2i7c_A 144 F------LENV-TNTYDVIIVDSS-DPIGP---AE----TLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGY 208 (283)
T ss_dssp H------HHHC-CSCEEEEEEECC-CTTTG---GG----GGSSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHH
T ss_pred H------HHhC-CCCceEEEEcCC-CCCCc---ch----hhhHHHHHHHHHHhcCCCcEEEEECCCcccCHHHHHHHHHH
Confidence 3 1112 468999999963 22211 11 111 356788899999999999874321 123456677
Q ss_pred HHhcCCceEEecC-CCCCCCCcceEEEEec
Q 021161 180 LKLFFPVVTFAKP-KSSRNSSIEAFAVCEN 208 (316)
Q Consensus 180 l~~~F~~V~~~KP-~sSR~~S~E~fvVc~g 208 (316)
++..|..|..+.- ..+-.+..-.|++|..
T Consensus 209 l~~~F~~v~~~~~~vP~y~~g~~g~~~~s~ 238 (283)
T 2i7c_A 209 AKKLFKKVEYANISIPTYPCGCIGILCCSK 238 (283)
T ss_dssp HHTTCSEEEEEEEECTTSGGGEEEEEEEES
T ss_pred HHHHCCceEEEEEEcCCcCCCcEEEEEEeC
Confidence 8888988866431 1122111225777753
No 186
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.83 E-value=2.9e-08 Score=94.78 Aligned_cols=108 Identities=21% Similarity=0.327 Sum_probs=80.1
Q ss_pred hhHHhhhHHcCCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCC----CCCCCcEEEecCc
Q 021161 27 FKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM----APIEGVIQVQGDI 102 (316)
Q Consensus 27 ~KL~qId~~f~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~----~~i~gV~~i~gDI 102 (316)
....++.+.+.-+.++.+|||+|||+|.++..++++.+ ..+++++|+..+ ...++|+++.+|+
T Consensus 195 ~~~~~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~-------------~~~~~~~D~~~~~~~a~~~~~v~~~~~d~ 261 (372)
T 1fp1_D 195 TEMKRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYP-------------LIKGINFDLPQVIENAPPLSGIEHVGGDM 261 (372)
T ss_dssp HHHHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCT-------------TCEEEEEECHHHHTTCCCCTTEEEEECCT
T ss_pred HHHHHHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCC-------------CCeEEEeChHHHHHhhhhcCCCEEEeCCc
Confidence 33456667776457788999999999999999999873 478999999333 2357899999999
Q ss_pred cChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEE
Q 021161 103 TNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (316)
Q Consensus 103 t~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Ki 167 (316)
.+. ++ .+|+|++... +|++... -+..+|..+.++|+|||.|++..
T Consensus 262 ~~~---------~~--~~D~v~~~~~-----lh~~~d~----~~~~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 262 FAS---------VP--QGDAMILKAV-----CHNWSDE----KCIEFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp TTC---------CC--CEEEEEEESS-----GGGSCHH----HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccC---------CC--CCCEEEEecc-----cccCCHH----HHHHHHHHHHHhcCCCCEEEEEE
Confidence 862 33 2999998643 3444332 12466888999999999999864
No 187
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.82 E-value=6.6e-09 Score=93.47 Aligned_cols=106 Identities=14% Similarity=0.113 Sum_probs=72.8
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-------------------CCCCcEEEec
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-------------------PIEGVIQVQG 100 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-------------------~i~gV~~i~g 100 (316)
.++.+|||+|||+|.++..+++..+ ...|+|||+++.+ .+.++.++++
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~-------------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~ 114 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFP-------------EDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRG 114 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHST-------------TSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEEC
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCC-------------CCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEec
Confidence 3678999999999999999998763 4699999999731 3468999999
Q ss_pred CccChhhHHHHHhhcCCccccEEEeCCCCCC-CCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEE
Q 021161 101 DITNARTAEVVIRHFDGCKADLVVCDGAPDV-TGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (316)
Q Consensus 101 DIt~~~t~~~I~~~~~~~~~DlVvsDgapdv-tG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Ki 167 (316)
|+.+.- ...+....+|.|+....... ...+...... ....+..+.++|+|||.|++.+
T Consensus 115 D~~~~l-----~~~~~~~~~d~v~~~~p~p~~k~~~~~~r~~----~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 115 NAMKFL-----PNFFEKGQLSKMFFCFPDPHFKQRKHKARII----TNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp CTTSCG-----GGTSCTTCEEEEEEESCCCC------CSSCC----CHHHHHHHHHHEEEEEEEEEEE
T ss_pred cHHHHH-----HHhccccccCEEEEECCCcccccchhHHhhc----cHHHHHHHHHHcCCCCEEEEEe
Confidence 998721 12355678999986542211 0001100000 1345778899999999999954
No 188
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.82 E-value=6.7e-09 Score=95.61 Aligned_cols=109 Identities=12% Similarity=0.096 Sum_probs=67.6
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEE--EEEeCCCCC------------CCCCcEE--EecCcc
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLI--VAIDLQPMA------------PIEGVIQ--VQGDIT 103 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~I--vaVDl~~~~------------~i~gV~~--i~gDIt 103 (316)
.++.+|||+|||+|.++..+.+.+.. ..+...| +++|+++.+ .++++.+ .++|+.
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~---------~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~ 121 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQA---------QYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSS 121 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHH---------HSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHh---------hCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchh
Confidence 46789999999999988766544320 0023544 999999731 1345544 344443
Q ss_pred ChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccC
Q 021161 104 NARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG 170 (316)
Q Consensus 104 ~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~ 170 (316)
+.. ......+..++||+|+|.... |.++. ...+|..+.++|||||.|++..+..
T Consensus 122 ~~~--~~~~~~~~~~~fD~V~~~~~l-----~~~~d------~~~~l~~~~r~LkpgG~l~i~~~~~ 175 (292)
T 2aot_A 122 EYQ--SRMLEKKELQKWDFIHMIQML-----YYVKD------IPATLKFFHSLLGTNAKMLIIVVSG 175 (292)
T ss_dssp HHH--HHHHTTTCCCCEEEEEEESCG-----GGCSC------HHHHHHHHHHTEEEEEEEEEEEECT
T ss_pred hhh--hhhccccCCCceeEEEEeeee-----eecCC------HHHHHHHHHHHcCCCcEEEEEEecC
Confidence 211 001111446789999997532 22222 1467889999999999999975543
No 189
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.82 E-value=1.6e-08 Score=95.52 Aligned_cols=141 Identities=15% Similarity=0.136 Sum_probs=93.5
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC---------C------CCCcEEEecCccC
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------P------IEGVIQVQGDITN 104 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~---------~------i~gV~~i~gDIt~ 104 (316)
.++.+|||||||+|+++..++++. +..+|++||+++.+ . .++++++++|+.+
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~-------------~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~ 181 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYK-------------SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASK 181 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCT-------------TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHH
T ss_pred CCCCEEEEEcCCccHHHHHHHHcC-------------CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHH
Confidence 356899999999999999988653 24699999999731 1 2578999999875
Q ss_pred hhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHH-HHHHHHHHHcccCCcEEEEEEccCC----CHHHHHHH
Q 021161 105 ARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLI-LAGLTVVTHVLKEGGKFIAKIFRGK----DTSLLYCQ 179 (316)
Q Consensus 105 ~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~-~aaL~~a~~vLkpGG~fV~Kif~~~----~~~~l~~~ 179 (316)
. ... ..++||+|++|.. +..+.. . .+. ...+..+.++|+|||.|++....+. ....+...
T Consensus 182 ~------l~~-~~~~fDvIi~d~~-~p~~~~--~-----~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~ 246 (321)
T 2pt6_A 182 F------LEN-VTNTYDVIIVDSS-DPIGPA--E-----TLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGY 246 (321)
T ss_dssp H------HHH-CCSCEEEEEEECC-CSSSGG--G-----GGSSHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHH
T ss_pred H------Hhh-cCCCceEEEECCc-CCCCcc--h-----hhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHH
Confidence 2 111 2468999999963 221110 1 111 4567788999999999999764332 24456677
Q ss_pred HHhcCCceEEec-CCCCCCCCcceEEEEec
Q 021161 180 LKLFFPVVTFAK-PKSSRNSSIEAFAVCEN 208 (316)
Q Consensus 180 l~~~F~~V~~~K-P~sSR~~S~E~fvVc~g 208 (316)
++..|..|..+. +..+..+..=.|++|..
T Consensus 247 l~~~F~~v~~~~~~vp~~~~g~w~f~~as~ 276 (321)
T 2pt6_A 247 AKKLFKKVEYANISIPTYPCGCIGILCCSK 276 (321)
T ss_dssp HHTTCSEEEEEEEECTTSGGGEEEEEEEES
T ss_pred HHHHCCCeEEEEEEeccccCceEEEEEeeC
Confidence 888898887653 22222222234777764
No 190
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.81 E-value=5.4e-09 Score=108.59 Aligned_cols=108 Identities=17% Similarity=0.117 Sum_probs=73.5
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCC--CcEEEecCccChhh
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE--GVIQVQGDITNART 107 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~--gV~~i~gDIt~~~t 107 (316)
++.+|||||||+|+++..+++.. ..+|++||+++.+ .+. +++++++|+.+.
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~g--------------a~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~-- 602 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGG--------------ARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAW-- 602 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTT--------------CSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHH--
T ss_pred CCCcEEEeeechhHHHHHHHHCC--------------CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHH--
Confidence 67899999999999999988742 2579999999842 233 689999998763
Q ss_pred HHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEcc
Q 021161 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (316)
Q Consensus 108 ~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~ 169 (316)
+.. ..++||+|++|.+.-..+-...+.+.........+..+.++|+|||.|++.+-.
T Consensus 603 ----l~~-~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 603 ----LRE-ANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp ----HHH-CCCCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ----HHh-cCCCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 111 246899999997421111110000111233456678889999999999987644
No 191
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.81 E-value=1.1e-08 Score=90.80 Aligned_cols=95 Identities=15% Similarity=0.151 Sum_probs=71.6
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CC-CCcEEEecCccChhh
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i-~gV~~i~gDIt~~~t 107 (316)
.++.+|||+|||+|.++..+++.++ ..+|+++|+++.. .+ .+|.++++|+.+...
T Consensus 53 ~~~~~vLdiG~G~G~~~~~la~~~~-------------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 119 (233)
T 2gpy_A 53 AAPARILEIGTAIGYSAIRMAQALP-------------EATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGE 119 (233)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHCT-------------TCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHH
T ss_pred cCCCEEEEecCCCcHHHHHHHHHCC-------------CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHH
Confidence 4678999999999999999999863 4799999999731 23 358999999986311
Q ss_pred HHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEE
Q 021161 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (316)
Q Consensus 108 ~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~K 166 (316)
.....++||+|+++.... + ....+..+.++|+|||.+++.
T Consensus 120 -----~~~~~~~fD~I~~~~~~~-----~---------~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 120 -----KLELYPLFDVLFIDAAKG-----Q---------YRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp -----HHTTSCCEEEEEEEGGGS-----C---------HHHHHHHHGGGEEEEEEEEEE
T ss_pred -----hcccCCCccEEEECCCHH-----H---------HHHHHHHHHHHcCCCeEEEEE
Confidence 011136899999986421 1 235577889999999999985
No 192
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=98.80 E-value=9.6e-09 Score=89.89 Aligned_cols=96 Identities=9% Similarity=0.029 Sum_probs=66.8
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCCcEEEecCccChhhHH
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTAE 109 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~gV~~i~gDIt~~~t~~ 109 (316)
++.+|||||||+|.++..++++. ..+|+|||+++.+ .+.+++++++|+.+..
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~--------------~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~--- 116 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRY--------------AAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFL--- 116 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT--------------CSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHH---
T ss_pred CCCeEEEeCCCcCHHHHHHHhcC--------------CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHH---
Confidence 67899999999999999877653 2489999999832 2357899999987521
Q ss_pred HHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHH--HHcccCCcEEEEEEcc
Q 021161 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVV--THVLKEGGKFIAKIFR 169 (316)
Q Consensus 110 ~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a--~~vLkpGG~fV~Kif~ 169 (316)
. ...++||+|++|.+.. . ... ..++..+ .++|+|||.|++.+..
T Consensus 117 ---~-~~~~~fD~V~~~~p~~-~--~~~---------~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 117 ---A-QKGTPHNIVFVDPPFR-R--GLL---------EETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp ---S-SCCCCEEEEEECCSSS-T--TTH---------HHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred ---h-hcCCCCCEEEECCCCC-C--CcH---------HHHHHHHHhcCccCCCcEEEEEECC
Confidence 1 2346899999996421 1 111 1223333 3469999999986643
No 193
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.80 E-value=4.2e-09 Score=92.03 Aligned_cols=93 Identities=18% Similarity=0.066 Sum_probs=69.0
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CC-CCcEEEecCccChhh
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i-~gV~~i~gDIt~~~t 107 (316)
.++.+|||+|||+|.++..+++.++ .+++|+++|+++.+ .+ ..++++++|+.+.
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~------------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-- 120 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAIS------------ISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGI-- 120 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSC------------TTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHH--
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCC------------CCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHH--
Confidence 3668999999999999999998763 25799999999832 12 2488999998642
Q ss_pred HHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEE
Q 021161 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (316)
Q Consensus 108 ~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~K 166 (316)
...+. + ||+|++|+.. .+ ....+..+.++|||||.|++.
T Consensus 121 ----~~~~~-~-fD~v~~~~~~-----~~---------~~~~l~~~~~~LkpgG~lv~~ 159 (210)
T 3c3p_A 121 ----AAGQR-D-IDILFMDCDV-----FN---------GADVLERMNRCLAKNALLIAV 159 (210)
T ss_dssp ----HTTCC-S-EEEEEEETTT-----SC---------HHHHHHHHGGGEEEEEEEEEE
T ss_pred ----hccCC-C-CCEEEEcCCh-----hh---------hHHHHHHHHHhcCCCeEEEEE
Confidence 12233 4 9999999532 11 134577889999999999984
No 194
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.80 E-value=8.2e-09 Score=90.95 Aligned_cols=99 Identities=14% Similarity=0.110 Sum_probs=71.4
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CC-CCcEEEecCccChhh
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i-~gV~~i~gDIt~~~t 107 (316)
.++.+|||+|||+|.++..+++.++ ..++|+++|+++.. .+ .+++++++|+.+.
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~------------~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~-- 133 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALP------------ADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALET-- 133 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSC------------TTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHH--
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCC------------CCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHH--
Confidence 4678999999999999999998764 25799999999842 22 4689999998652
Q ss_pred HHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEE
Q 021161 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (316)
Q Consensus 108 ~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~K 166 (316)
...+...-..++||+|++|+.. .. ....+..+.++|+|||.+++-
T Consensus 134 ~~~~~~~~~~~~~D~v~~d~~~--------~~------~~~~l~~~~~~L~pgG~lv~~ 178 (229)
T 2avd_A 134 LDELLAAGEAGTFDVAVVDADK--------EN------CSAYYERCLQLLRPGGILAVL 178 (229)
T ss_dssp HHHHHHTTCTTCEEEEEECSCS--------TT------HHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHhcCCCCCccEEEECCCH--------HH------HHHHHHHHHHHcCCCeEEEEE
Confidence 1122111011589999998641 11 134577888999999999984
No 195
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.79 E-value=1.4e-08 Score=88.66 Aligned_cols=93 Identities=20% Similarity=0.221 Sum_probs=70.0
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCCcEEEecCccChhh
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNART 107 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~gV~~i~gDIt~~~t 107 (316)
+.++.+|||+|||+|.++..+++..+ +..+|+++|+++.. .++++.++++|+....
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~l~~~~~------------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~- 141 (215)
T 2yxe_A 75 LKPGMKVLEIGTGCGYHAAVTAEIVG------------EDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGY- 141 (215)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHC------------TTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCC-
T ss_pred CCCCCEEEEECCCccHHHHHHHHHhC------------CCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCC-
Confidence 35788999999999999999999873 24699999999731 2467899999985421
Q ss_pred HHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEc
Q 021161 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (316)
Q Consensus 108 ~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif 168 (316)
...++||+|+++.... ... ..+.++|||||.+++.+-
T Consensus 142 -------~~~~~fD~v~~~~~~~-----~~~------------~~~~~~L~pgG~lv~~~~ 178 (215)
T 2yxe_A 142 -------EPLAPYDRIYTTAAGP-----KIP------------EPLIRQLKDGGKLLMPVG 178 (215)
T ss_dssp -------GGGCCEEEEEESSBBS-----SCC------------HHHHHTEEEEEEEEEEES
T ss_pred -------CCCCCeeEEEECCchH-----HHH------------HHHHHHcCCCcEEEEEEC
Confidence 1135799999986432 222 256789999999999654
No 196
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.78 E-value=9e-09 Score=94.84 Aligned_cols=98 Identities=20% Similarity=0.219 Sum_probs=71.7
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC--------CC------CCcEEEecCccChh
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------PI------EGVIQVQGDITNAR 106 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~--------~i------~gV~~i~gDIt~~~ 106 (316)
++.+|||||||+|.++..++++. .+|+|+|+++.+ .- .+++++++|+.+..
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~~---------------~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~ 146 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDLG---------------WEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFA 146 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTTT---------------CCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCC
T ss_pred CCCcEEEEeccCCHHHHHHHHcC---------------CeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCC
Confidence 34599999999999999998752 589999999832 11 46899999999853
Q ss_pred hHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccC
Q 021161 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG 170 (316)
Q Consensus 107 t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~ 170 (316)
+ .++||+|+|... + ++..+. .....+|..+.++|||||.|++.++..
T Consensus 147 --------~-~~~fD~v~~~~~--~--~~~~~~----~~~~~~l~~~~~~L~pgG~l~~~~~~~ 193 (299)
T 3g2m_A 147 --------L-DKRFGTVVISSG--S--INELDE----ADRRGLYASVREHLEPGGKFLLSLAMS 193 (299)
T ss_dssp --------C-SCCEEEEEECHH--H--HTTSCH----HHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred --------c-CCCcCEEEECCc--c--cccCCH----HHHHHHHHHHHHHcCCCcEEEEEeecC
Confidence 2 478999997521 1 122222 123466888899999999999987653
No 197
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.78 E-value=8.8e-09 Score=92.15 Aligned_cols=126 Identities=13% Similarity=0.118 Sum_probs=82.0
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC--------CCCC-----------------
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------PIEG----------------- 94 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~--------~i~g----------------- 94 (316)
.++.+|||||||+|.++..+++.. ..+|+|+|+++.+ ...+
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~--------------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACES--------------FTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEG 120 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGT--------------EEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTT
T ss_pred cCCCEEEEECCCccHHHHHHhhcc--------------cCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccc
Confidence 356899999999999988877543 1489999999731 1122
Q ss_pred ---------------c-EEEecCccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHccc
Q 021161 95 ---------------V-IQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLK 158 (316)
Q Consensus 95 ---------------V-~~i~gDIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLk 158 (316)
+ .++++|+++.... .....++||+|+|......... .. .-...++..+.++||
T Consensus 121 ~~~~~~~~~~~l~~~v~~~~~~d~~~~~~~----~~~~~~~fD~v~~~~~l~~~~~-~~------~~~~~~l~~~~~~Lk 189 (265)
T 2i62_A 121 NRMKGPEKEEKLRRAIKQVLKCDVTQSQPL----GGVSLPPADCLLSTLCLDAACP-DL------PAYRTALRNLGSLLK 189 (265)
T ss_dssp TCSCHHHHHHHHHHHEEEEEECCTTSSSTT----TTCCCCCEEEEEEESCHHHHCS-SH------HHHHHHHHHHHTTEE
T ss_pred cccchHHHHHHhhhhheeEEEeeeccCCCC----CccccCCccEEEEhhhhhhhcC-Ch------HHHHHHHHHHHhhCC
Confidence 7 8899999875310 0112268999999753210000 11 113466888899999
Q ss_pred CCcEEEEEEccC---------------CCHHHHHHHHHhc-CCceEEe
Q 021161 159 EGGKFIAKIFRG---------------KDTSLLYCQLKLF-FPVVTFA 190 (316)
Q Consensus 159 pGG~fV~Kif~~---------------~~~~~l~~~l~~~-F~~V~~~ 190 (316)
|||.|++..... .+...+...++.. |+.+.+.
T Consensus 190 pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 237 (265)
T 2i62_A 190 PGGFLVMVDALKSSYYMIGEQKFSSLPLGWETVRDAVEEAGYTIEQFE 237 (265)
T ss_dssp EEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred CCcEEEEEecCCCceEEcCCccccccccCHHHHHHHHHHCCCEEEEEE
Confidence 999999865321 2344677777654 7666654
No 198
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.78 E-value=1.4e-08 Score=95.74 Aligned_cols=95 Identities=17% Similarity=0.216 Sum_probs=69.0
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----------CC-CCcEEEecCccChhhH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PI-EGVIQVQGDITNARTA 108 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----------~i-~gV~~i~gDIt~~~t~ 108 (316)
.++.+|||+|||+|.++..+++. + ..+|+|+|+++|. .+ .+|+++++|+.+..
T Consensus 37 ~~~~~VLDiGcGtG~ls~~la~~-g-------------~~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-- 100 (328)
T 1g6q_1 37 FKDKIVLDVGCGTGILSMFAAKH-G-------------AKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVH-- 100 (328)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHT-C-------------CSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSC--
T ss_pred cCCCEEEEecCccHHHHHHHHHC-C-------------CCEEEEEChHHHHHHHHHHHHHcCCCCCEEEEECchhhcc--
Confidence 46789999999999999988875 2 2589999999752 12 35899999998753
Q ss_pred HHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEE
Q 021161 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFI 164 (316)
Q Consensus 109 ~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV 164 (316)
++.++||+|+|+.... .+.... ....++..+.++|||||.++
T Consensus 101 ------~~~~~~D~Ivs~~~~~--~l~~~~------~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 101 ------LPFPKVDIIISEWMGY--FLLYES------MMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp ------CSSSCEEEEEECCCBT--TBSTTC------CHHHHHHHHHHHEEEEEEEE
T ss_pred ------CCCCcccEEEEeCchh--hcccHH------HHHHHHHHHHhhcCCCeEEE
Confidence 3446899999985321 121111 12345667789999999997
No 199
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.77 E-value=5.2e-09 Score=94.14 Aligned_cols=109 Identities=19% Similarity=0.232 Sum_probs=71.4
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC--------CCC---C---------------
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------PIE---G--------------- 94 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~--------~i~---g--------------- 94 (316)
++.+|||+|||+|.++..+++++.. +..+|+|+|+++.+ ... +
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~-----------~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRR-----------SLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERF 119 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGG-----------GEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhcc-----------CCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhc
Confidence 5679999999999999999987310 23689999999842 111 1
Q ss_pred --------------cE-------------EEecCccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHH
Q 021161 95 --------------VI-------------QVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLIL 147 (316)
Q Consensus 95 --------------V~-------------~i~gDIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~ 147 (316)
|+ +.++|+.+...... ...+.+||+|+|+...... ..+.+........
T Consensus 120 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~---~~~~~~fD~Iv~npp~~~~--~~~~~~~~~~~~~ 194 (250)
T 1o9g_A 120 GKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSA---VLAGSAPDVVLTDLPYGER--THWEGQVPGQPVA 194 (250)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHH---HHTTCCCSEEEEECCGGGS--SSSSSCCCHHHHH
T ss_pred ccccchhhhhhhhhhhhhccccccccccceeeccccccccccc---ccCCCCceEEEeCCCeecc--ccccccccccHHH
Confidence 56 88999987431100 0033589999999632111 1111000123345
Q ss_pred HHHHHHHHcccCCcEEEE
Q 021161 148 AGLTVVTHVLKEGGKFIA 165 (316)
Q Consensus 148 aaL~~a~~vLkpGG~fV~ 165 (316)
..+..+.++|+|||.|++
T Consensus 195 ~~l~~~~~~LkpgG~l~~ 212 (250)
T 1o9g_A 195 GLLRSLASALPAHAVIAV 212 (250)
T ss_dssp HHHHHHHHHSCTTCEEEE
T ss_pred HHHHHHHHhcCCCcEEEE
Confidence 667888999999999998
No 200
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.75 E-value=2.4e-08 Score=94.59 Aligned_cols=118 Identities=12% Similarity=0.042 Sum_probs=81.9
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----------CCCCcEEEecCccChhhHHH
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTAEV 110 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----------~i~gV~~i~gDIt~~~t~~~ 110 (316)
++.+|||||||+|.++..++++.+ ..+|+++|+++.+ .-..+.++.+|+.+.
T Consensus 196 ~~~~VLDlGcG~G~~~~~la~~~~-------------~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~----- 257 (343)
T 2pjd_A 196 TKGKVLDVGCGAGVLSVAFARHSP-------------KIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSE----- 257 (343)
T ss_dssp CCSBCCBTTCTTSHHHHHHHHHCT-------------TCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTT-----
T ss_pred CCCeEEEecCccCHHHHHHHHHCC-------------CCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEcccccc-----
Confidence 467999999999999999998753 4689999999842 011256788998753
Q ss_pred HHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCCCHHHHHHHHHhcCCceEEe
Q 021161 111 VIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFFPVVTFA 190 (316)
Q Consensus 111 I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~~~~~l~~~l~~~F~~V~~~ 190 (316)
..++||+|+|+.... .|.. .........+..+.++|||||.|++...+..... ..+...|..+...
T Consensus 258 -----~~~~fD~Iv~~~~~~-~g~~-----~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~---~~l~~~f~~~~~~ 323 (343)
T 2pjd_A 258 -----VKGRFDMIISNPPFH-DGMQ-----TSLDAAQTLIRGAVRHLNSGGELRIVANAFLPYP---DVLDETFGFHEVI 323 (343)
T ss_dssp -----CCSCEEEEEECCCCC-SSSH-----HHHHHHHHHHHHHGGGEEEEEEEEEEEETTSSHH---HHHHHHHSCCEEE
T ss_pred -----ccCCeeEEEECCCcc-cCcc-----CCHHHHHHHHHHHHHhCCCCcEEEEEEcCCCCcH---HHHHHhcCceEEE
Confidence 246899999987432 2221 1122345678899999999999999765544443 3344556555543
No 201
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.75 E-value=1.2e-08 Score=96.90 Aligned_cols=95 Identities=17% Similarity=0.242 Sum_probs=69.5
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----------CC-CCcEEEecCccChhhH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PI-EGVIQVQGDITNARTA 108 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----------~i-~gV~~i~gDIt~~~t~ 108 (316)
.++.+|||+|||+|.++..++++. ..+|+|||+++|. .+ .+|+++++|+.+..
T Consensus 49 ~~~~~VLDiGcGtG~ls~~la~~g--------------~~~V~~vD~s~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-- 112 (348)
T 2y1w_A 49 FKDKIVLDVGCGSGILSFFAAQAG--------------ARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVS-- 112 (348)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHTT--------------CSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCC--
T ss_pred CCcCEEEEcCCCccHHHHHHHhCC--------------CCEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcchhhCC--
Confidence 467899999999999999988752 3699999999853 13 46899999998753
Q ss_pred HHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEE
Q 021161 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (316)
Q Consensus 109 ~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~K 166 (316)
++ ++||+|+|++... +-..+. ....+..+.++|||||.+++.
T Consensus 113 ------~~-~~~D~Ivs~~~~~----~~~~~~-----~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 113 ------LP-EQVDIIISEPMGY----MLFNER-----MLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp ------CS-SCEEEEEECCCBT----TBTTTS-----HHHHHHHGGGGEEEEEEEESC
T ss_pred ------CC-CceeEEEEeCchh----cCChHH-----HHHHHHHHHhhcCCCeEEEEe
Confidence 22 5799999986422 111111 134456678999999999843
No 202
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.75 E-value=8.7e-09 Score=95.66 Aligned_cols=113 Identities=19% Similarity=0.144 Sum_probs=77.1
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC------------------CCCCcEEEecC
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------------------PIEGVIQVQGD 101 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~------------------~i~gV~~i~gD 101 (316)
.++.+|||||||+|.++..+++.. ..+|+++|+++.+ ...++.++++|
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~~--------------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D 98 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKGR--------------INKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITAD 98 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHTT--------------CSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECC
T ss_pred CCCCEEEEECCCCcHHHHHHHhcC--------------CCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEec
Confidence 467899999999999999998742 3699999999732 12368899999
Q ss_pred ccChhhHHHHHhhcC--CccccEEEeCCCCCCCCCCCc-cHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCCCHHHHHH
Q 021161 102 ITNARTAEVVIRHFD--GCKADLVVCDGAPDVTGLHDM-DEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYC 178 (316)
Q Consensus 102 It~~~t~~~I~~~~~--~~~~DlVvsDgapdvtG~~~~-de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~~~~~l~~ 178 (316)
+.+... ...+. .++||+|+|..+. |.. .. ..-...++..+.++|||||.|++.++.. ..+..
T Consensus 99 ~~~~~~----~~~~~~~~~~fD~V~~~~~l-----~~~~~~---~~~~~~~l~~~~~~LkpgG~li~~~~~~---~~l~~ 163 (313)
T 3bgv_A 99 SSKELL----IDKFRDPQMCFDICSCQFVC-----HYSFES---YEQADMMLRNACERLSPGGYFIGTTPNS---FELIR 163 (313)
T ss_dssp TTTSCS----TTTCSSTTCCEEEEEEETCG-----GGGGGS---HHHHHHHHHHHHTTEEEEEEEEEEEECH---HHHHH
T ss_pred ccccch----hhhcccCCCCEEEEEEecch-----hhccCC---HHHHHHHHHHHHHHhCCCcEEEEecCCh---HHHHH
Confidence 987531 01132 3489999997643 211 10 0112467888999999999999977643 44555
Q ss_pred HHH
Q 021161 179 QLK 181 (316)
Q Consensus 179 ~l~ 181 (316)
.+.
T Consensus 164 ~~~ 166 (313)
T 3bgv_A 164 RLE 166 (313)
T ss_dssp HHT
T ss_pred HHH
Confidence 444
No 203
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.74 E-value=9.4e-09 Score=99.33 Aligned_cols=111 Identities=18% Similarity=0.136 Sum_probs=75.0
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CC-C-CcEEEecCccChh
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-E-GVIQVQGDITNAR 106 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i-~-gV~~i~gDIt~~~ 106 (316)
.++.+|||||||+|+|+..+++.. ..+|+|||+++.+ .+ . +++++++|+.+..
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g--------------~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~ 284 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGG--------------CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLL 284 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTT--------------CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHH
T ss_pred hCCCeEEEeeccCCHHHHHHHHCC--------------CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHH
Confidence 478899999999999999998752 2589999999842 24 4 7889999987642
Q ss_pred hHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccC
Q 021161 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG 170 (316)
Q Consensus 107 t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~ 170 (316)
..+.. .+.+||+|++|.+.-.......... ...+...+..+.++|+|||.+++.....
T Consensus 285 --~~~~~--~~~~fD~Ii~dpP~~~~~~~~~~~~--~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 342 (396)
T 3c0k_A 285 --RTYRD--RGEKFDVIVMDPPKFVENKSQLMGA--CRGYKDINMLAIQLLNEGGILLTFSCSG 342 (396)
T ss_dssp --HHHHH--TTCCEEEEEECCSSTTTCSSSSSCC--CTHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred --HHHHh--cCCCCCEEEECCCCCCCChhHHHHH--HHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 11111 2468999999963211111111000 0112355777899999999999877654
No 204
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.74 E-value=1.7e-08 Score=96.02 Aligned_cols=121 Identities=18% Similarity=0.202 Sum_probs=82.2
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC--------C-------CCCcEEEecCccC
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------P-------IEGVIQVQGDITN 104 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~--------~-------i~gV~~i~gDIt~ 104 (316)
.+..+|||||||+|.++..++++. +..+|++||+++.+ + .++|+++++|+.+
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~-------------~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~ 185 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHA-------------SIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVA 185 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCT-------------TCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHH
T ss_pred CCCCEEEEECCCccHHHHHHHHcC-------------CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHH
Confidence 456899999999999999988753 24699999999831 1 2578999999865
Q ss_pred hhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEE---ccCC-CHHHHHHHH
Q 021161 105 ARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI---FRGK-DTSLLYCQL 180 (316)
Q Consensus 105 ~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Ki---f~~~-~~~~l~~~l 180 (316)
. +..+..++||+|++|.. +..+. .+.. .....+..+.++|+|||.|++.. +.+. ....+...+
T Consensus 186 ~------l~~~~~~~fDlIi~d~~-~p~~~--~~~l----~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l 252 (334)
T 1xj5_A 186 F------LKNAAEGSYDAVIVDSS-DPIGP--AKEL----FEKPFFQSVARALRPGGVVCTQAESLWLHMDIIEDIVSNC 252 (334)
T ss_dssp H------HHTSCTTCEEEEEECCC-CTTSG--GGGG----GSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHH
T ss_pred H------HHhccCCCccEEEECCC-CccCc--chhh----hHHHHHHHHHHhcCCCcEEEEecCCccccHHHHHHHHHHH
Confidence 2 12233468999999964 11111 1110 01456788899999999999963 2221 133455667
Q ss_pred HhcCCc
Q 021161 181 KLFFPV 186 (316)
Q Consensus 181 ~~~F~~ 186 (316)
+..|..
T Consensus 253 ~~~F~~ 258 (334)
T 1xj5_A 253 REIFKG 258 (334)
T ss_dssp HHHCSS
T ss_pred HHhCcc
Confidence 778884
No 205
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.74 E-value=8.4e-08 Score=86.09 Aligned_cols=133 Identities=12% Similarity=0.121 Sum_probs=82.3
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCC-CcEEEecCccChhhH
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITNARTA 108 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~-gV~~i~gDIt~~~t~ 108 (316)
++.+|||||||+|.++..++++.+ ..+|+|+|+++.+ .+. +++++++|+.+..
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~-------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-- 129 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLN-------------GWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLL-- 129 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHH-------------CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSS--
T ss_pred CCCEEEEeCCChhHHHHHHHHhCC-------------CCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhh--
Confidence 577999999999999999988763 3799999999832 233 3899999987520
Q ss_pred HHHHhhcC---CccccEEEeCCCCCCCCC--CCc----------cHHH------------HHHHHHHHHHHHHHcccCCc
Q 021161 109 EVVIRHFD---GCKADLVVCDGAPDVTGL--HDM----------DEFV------------QSQLILAGLTVVTHVLKEGG 161 (316)
Q Consensus 109 ~~I~~~~~---~~~~DlVvsDgapdvtG~--~~~----------de~~------------~~~L~~aaL~~a~~vLkpGG 161 (316)
.+.+. .++||+|+||.+....+. +.. ...+ ...++...+..+..+|+++|
T Consensus 130 ---~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~~~~~~~~~l~~~g 206 (254)
T 2h00_A 130 ---MDALKEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLR 206 (254)
T ss_dssp ---TTTSTTCCSCCBSEEEECCCCC-------------------------CTTTTHHHHTHHHHHHHHHHHHHHHGGGBS
T ss_pred ---hhhhhcccCCcccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHHHHHHHHhcccceE
Confidence 01133 258999999964322220 000 0000 01122333445567788999
Q ss_pred EEEEEEccCCCHHHHHHHHHhc-CCceEEec
Q 021161 162 KFIAKIFRGKDTSLLYCQLKLF-FPVVTFAK 191 (316)
Q Consensus 162 ~fV~Kif~~~~~~~l~~~l~~~-F~~V~~~K 191 (316)
.+...+-.......+...++.. |..|.+..
T Consensus 207 ~~~~~~~~~~~~~~~~~~l~~~Gf~~v~~~~ 237 (254)
T 2h00_A 207 WYSCMLGKKCSLAPLKEELRIQGVPKVTYTE 237 (254)
T ss_dssp CEEEEESSTTSHHHHHHHHHHTTCSEEEEEE
T ss_pred EEEECCCChhHHHHHHHHHHHcCCCceEEEE
Confidence 8877554444546666666654 88776643
No 206
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.74 E-value=7.3e-09 Score=93.57 Aligned_cols=96 Identities=21% Similarity=0.229 Sum_probs=69.8
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC------CCCCcEEEecCccChhhHHHHHh
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIR 113 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~------~i~gV~~i~gDIt~~~t~~~I~~ 113 (316)
.++.+|||+|||+|.++..++++ +.+|+++|+++.+ ...+ .++++|+.+.+
T Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~---------------~~~v~gvD~s~~~l~~a~~~~~~-~~~~~d~~~~~------- 109 (260)
T 2avn_A 53 KNPCRVLDLGGGTGKWSLFLQER---------------GFEVVLVDPSKEMLEVAREKGVK-NVVEAKAEDLP------- 109 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHHTT---------------TCEEEEEESCHHHHHHHHHHTCS-CEEECCTTSCC-------
T ss_pred CCCCeEEEeCCCcCHHHHHHHHc---------------CCeEEEEeCCHHHHHHHHhhcCC-CEEECcHHHCC-------
Confidence 47789999999999999998864 2589999999832 1222 27889998753
Q ss_pred hcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEcc
Q 021161 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (316)
Q Consensus 114 ~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~ 169 (316)
+..++||+|+|.... .|..+. ...+|..+.++|||||.|++.++.
T Consensus 110 -~~~~~fD~v~~~~~~----~~~~~~------~~~~l~~~~~~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 110 -FPSGAFEAVLALGDV----LSYVEN------KDKAFSEIRRVLVPDGLLIATVDN 154 (260)
T ss_dssp -SCTTCEEEEEECSSH----HHHCSC------HHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred -CCCCCEEEEEEcchh----hhcccc------HHHHHHHHHHHcCCCeEEEEEeCC
Confidence 445789999986421 010011 246688889999999999997654
No 207
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.73 E-value=3e-08 Score=92.90 Aligned_cols=142 Identities=16% Similarity=0.192 Sum_probs=91.1
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC--------C-------CCCcEEEecCccC
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------P-------IEGVIQVQGDITN 104 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~--------~-------i~gV~~i~gDIt~ 104 (316)
.++.+|||||||+|.++..++++. +..+|++||+++.. + .++++++.+|+.+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~-------------~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~ 160 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHP-------------SVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFE 160 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCT-------------TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHcC-------------CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHH
Confidence 456899999999999999888653 24699999999831 1 3578999999864
Q ss_pred hhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCC----CHHHHHHHH
Q 021161 105 ARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK----DTSLLYCQL 180 (316)
Q Consensus 105 ~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~----~~~~l~~~l 180 (316)
. +.. ..++||+|++|.. +..+. .+. ......+..+.++|+|||.|++...... ....+...+
T Consensus 161 ~------l~~-~~~~fD~Ii~d~~-~~~~~---~~~---l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l 226 (304)
T 2o07_A 161 F------MKQ-NQDAFDVIITDSS-DPMGP---AES---LFKESYYQLMKTALKEDGVLCCQGECQWLHLDLIKEMRQFC 226 (304)
T ss_dssp H------HHT-CSSCEEEEEEECC------------------CHHHHHHHHHEEEEEEEEEEEECTTTCHHHHHHHHHHH
T ss_pred H------Hhh-CCCCceEEEECCC-CCCCc---chh---hhHHHHHHHHHhccCCCeEEEEecCCcccchHHHHHHHHHH
Confidence 2 111 2468999999963 21110 000 0113457788999999999998763321 234566778
Q ss_pred HhcCCceEEec-CCCCCCCCcceEEEEec
Q 021161 181 KLFFPVVTFAK-PKSSRNSSIEAFAVCEN 208 (316)
Q Consensus 181 ~~~F~~V~~~K-P~sSR~~S~E~fvVc~g 208 (316)
+..|..+.... ...+..+..-.|++|..
T Consensus 227 ~~~f~~v~~~~~~vP~~~~g~~g~~~as~ 255 (304)
T 2o07_A 227 QSLFPVVAYAYCTIPTYPSGQIGFMLCSK 255 (304)
T ss_dssp HHHCSEEEEEEEECTTSGGGEEEEEEEES
T ss_pred HHhCCCceeEEEEeccccCcceEEEEEeC
Confidence 88899887652 11122212235777764
No 208
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.73 E-value=2.5e-08 Score=87.85 Aligned_cols=102 Identities=14% Similarity=0.211 Sum_probs=72.2
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------C-----CCCcEEEecCc
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------P-----IEGVIQVQGDI 102 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~-----i~gV~~i~gDI 102 (316)
++++.+|||+|||+|.++..+++..+. ...+.++|+++|+++.+ . ..+++++++|+
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~la~~~~~--------~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 149 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCMAIKMNV--------LENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNI 149 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHHHHHTTT--------TTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCG
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHhcc--------cCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECCh
Confidence 467899999999999999999987630 00124699999999831 1 35799999999
Q ss_pred cChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEcc
Q 021161 103 TNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (316)
Q Consensus 103 t~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~ 169 (316)
.+.... .. ...++||+|+++++.. .. +..+.++|+|||.+++-+..
T Consensus 150 ~~~~~~-~~---~~~~~fD~I~~~~~~~-----~~------------~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 150 YQVNEE-EK---KELGLFDAIHVGASAS-----EL------------PEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp GGCCHH-HH---HHHCCEEEEEECSBBS-----SC------------CHHHHHHEEEEEEEEEEEEE
T ss_pred Hhcccc-cC---ccCCCcCEEEECCchH-----HH------------HHHHHHhcCCCcEEEEEEcc
Confidence 874210 00 1135799999987532 11 24567899999999996643
No 209
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.73 E-value=1.5e-08 Score=90.60 Aligned_cols=98 Identities=14% Similarity=0.026 Sum_probs=69.3
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCC--C-------C------CCCCcEEEecCccC
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQP--M-------A------PIEGVIQVQGDITN 104 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~--~-------~------~i~gV~~i~gDIt~ 104 (316)
+++.+|||||||+|.++..++++. ++..|+|||+++ | + .++++.++++|+.+
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~-------------~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~ 89 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAIND-------------QNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAES 89 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTC-------------TTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTB
T ss_pred CCCCEEEEEeccCcHHHHHHHHhC-------------CCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHH
Confidence 578899999999999999998754 357999999994 3 1 24678999999987
Q ss_pred hhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHH---HHHHHHHHHHcccCCcEEEEE
Q 021161 105 ARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQL---ILAGLTVVTHVLKEGGKFIAK 166 (316)
Q Consensus 105 ~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L---~~aaL~~a~~vLkpGG~fV~K 166 (316)
.+. .+. ..+|.|.++... .. ..... ...++..+.++|||||.|++.
T Consensus 90 l~~------~~~-d~v~~i~~~~~~--------~~-~~~~~~~~~~~~l~~~~r~LkpGG~l~i~ 138 (225)
T 3p2e_A 90 LPF------ELK-NIADSISILFPW--------GT-LLEYVIKPNRDILSNVADLAKKEAHFEFV 138 (225)
T ss_dssp CCG------GGT-TCEEEEEEESCC--------HH-HHHHHHTTCHHHHHHHHTTEEEEEEEEEE
T ss_pred hhh------hcc-CeEEEEEEeCCC--------cH-HhhhhhcchHHHHHHHHHhcCCCcEEEEE
Confidence 531 121 457777765421 11 01010 135688899999999999983
No 210
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.72 E-value=1.5e-08 Score=89.69 Aligned_cols=99 Identities=18% Similarity=0.196 Sum_probs=71.4
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------C-----CCCcEEEecCc
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------P-----IEGVIQVQGDI 102 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~-----i~gV~~i~gDI 102 (316)
++++.+|||+|||+|.++..+++..+.. .....++|+++|+++.. . ..+++++++|+
T Consensus 82 ~~~~~~VLdiG~G~G~~~~~la~~~~~~-------~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 154 (227)
T 1r18_A 82 LKPGARILDVGSGSGYLTACFYRYIKAK-------GVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDG 154 (227)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHS-------CCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCG
T ss_pred CCCCCEEEEECCCccHHHHHHHHhcccc-------cCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCc
Confidence 4678999999999999999999876310 00012599999999832 1 35789999998
Q ss_pred cChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEcc
Q 021161 103 TNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (316)
Q Consensus 103 t~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~ 169 (316)
.+.. ...++||+|+++.+.. .. +..+.++|||||.+++.+..
T Consensus 155 ~~~~--------~~~~~fD~I~~~~~~~-----~~------------~~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 155 RKGY--------PPNAPYNAIHVGAAAP-----DT------------PTELINQLASGGRLIVPVGP 196 (227)
T ss_dssp GGCC--------GGGCSEEEEEECSCBS-----SC------------CHHHHHTEEEEEEEEEEESC
T ss_pred ccCC--------CcCCCccEEEECCchH-----HH------------HHHHHHHhcCCCEEEEEEec
Confidence 8621 1125799999987532 11 13567899999999997754
No 211
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.72 E-value=2.5e-08 Score=87.95 Aligned_cols=89 Identities=18% Similarity=0.196 Sum_probs=67.3
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC---------CCCCcEEEecCccChhhHHH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAEV 110 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~---------~i~gV~~i~gDIt~~~t~~~ 110 (316)
.++.+|||+|||+|.++..+++.. .+|+++|+++.+ ...++.++++|+.+..
T Consensus 69 ~~~~~vLdiG~G~G~~~~~l~~~~---------------~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~---- 129 (231)
T 1vbf_A 69 HKGQKVLEIGTGIGYYTALIAEIV---------------DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGY---- 129 (231)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS---------------SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCC----
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHc---------------CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCccccc----
Confidence 578899999999999999999864 589999999731 1127899999997621
Q ss_pred HHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEc
Q 021161 111 VIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (316)
Q Consensus 111 I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif 168 (316)
...++||+|+++.... .+. ..+.++|+|||.+++.+.
T Consensus 130 ----~~~~~fD~v~~~~~~~-----~~~------------~~~~~~L~pgG~l~~~~~ 166 (231)
T 1vbf_A 130 ----EEEKPYDRVVVWATAP-----TLL------------CKPYEQLKEGGIMILPIG 166 (231)
T ss_dssp ----GGGCCEEEEEESSBBS-----SCC------------HHHHHTEEEEEEEEEEEC
T ss_pred ----ccCCCccEEEECCcHH-----HHH------------HHHHHHcCCCcEEEEEEc
Confidence 1236899999986432 222 236789999999999653
No 212
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.72 E-value=3.3e-08 Score=93.13 Aligned_cols=111 Identities=21% Similarity=0.323 Sum_probs=80.4
Q ss_pred HHhhhHHcCCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----------CC-CCcEE
Q 021161 29 LLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PI-EGVIQ 97 (316)
Q Consensus 29 L~qId~~f~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----------~i-~gV~~ 97 (316)
+.++.+.+.+..++.+|||+|||+|.++..++++.+ ..+++++|+..+. .+ .+|++
T Consensus 167 ~~~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p-------------~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~ 233 (352)
T 3mcz_A 167 MVDVVSELGVFARARTVIDLAGGHGTYLAQVLRRHP-------------QLTGQIWDLPTTRDAARKTIHAHDLGGRVEF 233 (352)
T ss_dssp HHHHHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCT-------------TCEEEEEECGGGHHHHHHHHHHTTCGGGEEE
T ss_pred HHHHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCC-------------CCeEEEEECHHHHHHHHHHHHhcCCCCceEE
Confidence 345666666655488999999999999999998863 4799999994431 12 35899
Q ss_pred EecCccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEc
Q 021161 98 VQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (316)
Q Consensus 98 i~gDIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif 168 (316)
+.+|+.+... +..+.||+|++... +|+++.. -+..+|..+.++|+|||.|++-.+
T Consensus 234 ~~~d~~~~~~-------~~~~~~D~v~~~~v-----lh~~~~~----~~~~~l~~~~~~L~pgG~l~i~e~ 288 (352)
T 3mcz_A 234 FEKNLLDARN-------FEGGAADVVMLNDC-----LHYFDAR----EAREVIGHAAGLVKPGGALLILTM 288 (352)
T ss_dssp EECCTTCGGG-------GTTCCEEEEEEESC-----GGGSCHH----HHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EeCCcccCcc-------cCCCCccEEEEecc-----cccCCHH----HHHHHHHHHHHHcCCCCEEEEEEe
Confidence 9999987531 12356999999643 3444332 134668889999999999988643
No 213
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.71 E-value=2.3e-07 Score=86.30 Aligned_cols=109 Identities=19% Similarity=0.179 Sum_probs=78.0
Q ss_pred HHhhhHHcCC-cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----------CCC-CcE
Q 021161 29 LLQIDEEFNI-FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIE-GVI 96 (316)
Q Consensus 29 L~qId~~f~~-~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----------~i~-gV~ 96 (316)
..++.+.+.+ +.++.+|||+|||+|.++..++++.+ ..+++++|++.+. .+. +|+
T Consensus 152 ~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p-------------~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~ 218 (335)
T 2r3s_A 152 AQLIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNP-------------NAEIFGVDWASVLEVAKENARIQGVASRYH 218 (335)
T ss_dssp HHHHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCT-------------TCEEEEEECHHHHHHHHHHHHHHTCGGGEE
T ss_pred HHHHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCC-------------CCeEEEEecHHHHHHHHHHHHhcCCCcceE
Confidence 3455566665 36778999999999999999998863 4699999998431 122 589
Q ss_pred EEecCccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEc
Q 021161 97 QVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (316)
Q Consensus 97 ~i~gDIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif 168 (316)
++++|+.+.. +. ..||+|++... +|.++.. -....|..+.++|+|||.+++..+
T Consensus 219 ~~~~d~~~~~--------~~-~~~D~v~~~~~-----l~~~~~~----~~~~~l~~~~~~L~pgG~l~i~e~ 272 (335)
T 2r3s_A 219 TIAGSAFEVD--------YG-NDYDLVLLPNF-----LHHFDVA----TCEQLLRKIKTALAVEGKVIVFDF 272 (335)
T ss_dssp EEESCTTTSC--------CC-SCEEEEEEESC-----GGGSCHH----HHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEecccccCC--------CC-CCCcEEEEcch-----hccCCHH----HHHHHHHHHHHhCCCCcEEEEEee
Confidence 9999998742 33 34999999643 2333221 124567888999999999988654
No 214
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.71 E-value=3.3e-08 Score=95.66 Aligned_cols=93 Identities=23% Similarity=0.276 Sum_probs=67.0
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCC----------C-CCcEEEecCccChhhHH
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----------I-EGVIQVQGDITNARTAE 109 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~----------i-~gV~~i~gDIt~~~t~~ 109 (316)
++.+|||+|||+|.+|..+++.. ..+|+|||.++|+. + ..|+++++|+++..
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aG--------------A~~V~ave~s~~~~~a~~~~~~n~~~~~i~~i~~~~~~~~--- 145 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAG--------------ARRVYAVEASAIWQQAREVVRFNGLEDRVHVLPGPVETVE--- 145 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTT--------------CSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCC---
T ss_pred CCCEEEEeCCCccHHHHHHHHhC--------------CCEEEEEeChHHHHHHHHHHHHcCCCceEEEEeeeeeeec---
Confidence 57899999999999998777642 35899999998742 2 34899999998863
Q ss_pred HHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEE
Q 021161 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFI 164 (316)
Q Consensus 110 ~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV 164 (316)
++ ++||+|||...- .++.. |. ++...+....++|||||.++
T Consensus 146 -----lp-e~~DvivsE~~~--~~l~~--e~----~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 146 -----LP-EQVDAIVSEWMG--YGLLH--ES----MLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp -----CS-SCEEEEECCCCB--TTBTT--TC----SHHHHHHHHHHHEEEEEEEE
T ss_pred -----CC-ccccEEEeeccc--ccccc--cc----hhhhHHHHHHhhCCCCceEC
Confidence 33 689999997431 11211 11 12344566678999999987
No 215
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.71 E-value=1.2e-07 Score=90.76 Aligned_cols=105 Identities=24% Similarity=0.323 Sum_probs=77.1
Q ss_pred hhhHHcCCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCC----CCCCCcEEEecCccChh
Q 021161 31 QIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM----APIEGVIQVQGDITNAR 106 (316)
Q Consensus 31 qId~~f~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~----~~i~gV~~i~gDIt~~~ 106 (316)
++.+.+.-+.+..+|||+|||+|.++..++++.+ ..+++++|+..+ ...++|+++.+|+.+.
T Consensus 193 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p-------------~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~~- 258 (368)
T 3reo_A 193 KILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYP-------------SINAINFDLPHVIQDAPAFSGVEHLGGDMFDG- 258 (368)
T ss_dssp HHHTTCCTTTTCSEEEEETCTTSHHHHHHHHHCT-------------TCEEEEEECHHHHTTCCCCTTEEEEECCTTTC-
T ss_pred HHHHhcccccCCCEEEEeCCCcCHHHHHHHHhCC-------------CCEEEEEehHHHHHhhhhcCCCEEEecCCCCC-
Confidence 4455555356788999999999999999999874 578999999433 1346899999999862
Q ss_pred hHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEc
Q 021161 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (316)
Q Consensus 107 t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif 168 (316)
++. .|+|++... +|++... -+..+|..+.++|+|||.+++.-+
T Consensus 259 --------~p~--~D~v~~~~v-----lh~~~~~----~~~~~l~~~~~~L~pgG~l~i~e~ 301 (368)
T 3reo_A 259 --------VPK--GDAIFIKWI-----CHDWSDE----HCLKLLKNCYAALPDHGKVIVAEY 301 (368)
T ss_dssp --------CCC--CSEEEEESC-----GGGBCHH----HHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred --------CCC--CCEEEEech-----hhcCCHH----HHHHHHHHHHHHcCCCCEEEEEEe
Confidence 332 299998642 3544432 124568889999999999988644
No 216
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=98.70 E-value=1.7e-09 Score=96.26 Aligned_cols=90 Identities=20% Similarity=0.139 Sum_probs=65.0
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CC-CCcEEEecCccChhhH
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNARTA 108 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i-~gV~~i~gDIt~~~t~ 108 (316)
++.+|||+|||+|.++..++++. .+|+|+|+++.+ .+ .+++++++|+.+..
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~---------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-- 140 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTG---------------MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-- 140 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTT---------------CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG--
T ss_pred CCCEEEECccccCHHHHHHHHcC---------------CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc--
Confidence 78899999999999999999752 699999999842 13 46899999997642
Q ss_pred HHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEE
Q 021161 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (316)
Q Consensus 109 ~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~ 165 (316)
..++||+|+++.+.... .+.. ..+..+.++|+|||.+++
T Consensus 141 -------~~~~~D~v~~~~~~~~~--~~~~---------~~~~~~~~~L~pgG~~i~ 179 (241)
T 3gdh_A 141 -------SFLKADVVFLSPPWGGP--DYAT---------AETFDIRTMMSPDGFEIF 179 (241)
T ss_dssp -------GGCCCSEEEECCCCSSG--GGGG---------SSSBCTTTSCSSCHHHHH
T ss_pred -------ccCCCCEEEECCCcCCc--chhh---------hHHHHHHhhcCCcceeHH
Confidence 23689999999654321 1111 123345678889887554
No 217
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.70 E-value=3.4e-08 Score=93.15 Aligned_cols=141 Identities=18% Similarity=0.240 Sum_probs=89.8
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC--------C-------CCCcEEEecCccC
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------P-------IEGVIQVQGDITN 104 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~--------~-------i~gV~~i~gDIt~ 104 (316)
.+..+|||||||+|+.+..++++. +..+|++||+++.. + .++++++.+|+.+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~-------------~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~ 173 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHE-------------SVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFE 173 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCT-------------TCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHH
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcC-------------CCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHH
Confidence 356899999999999999988653 24799999999731 1 2468899999865
Q ss_pred hhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHH-HHHHHHHHHcccCCcEEEEEEccC----CCHHHHHHH
Q 021161 105 ARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLI-LAGLTVVTHVLKEGGKFIAKIFRG----KDTSLLYCQ 179 (316)
Q Consensus 105 ~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~-~aaL~~a~~vLkpGG~fV~Kif~~----~~~~~l~~~ 179 (316)
. + .. ..++||+|++|.. +..+. . ..|. ...+..+.++|+|||.|++..-.. .....+...
T Consensus 174 ~-----l-~~-~~~~fD~Ii~d~~-~~~~~---~----~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~ 238 (314)
T 2b2c_A 174 F-----L-KN-HKNEFDVIITDSS-DPVGP---A----ESLFGQSYYELLRDALKEDGILSSQGESVWLHLPLIAHLVAF 238 (314)
T ss_dssp H-----H-HH-CTTCEEEEEECCC---------------------HHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHH
T ss_pred H-----H-Hh-cCCCceEEEEcCC-CCCCc---c----hhhhHHHHHHHHHhhcCCCeEEEEECCCcccCHHHHHHHHHH
Confidence 2 1 11 3468999999963 21110 1 1122 466788899999999999965221 123456677
Q ss_pred HHhcCCceEEecC-CCCCCCCcc-eEEEEecc
Q 021161 180 LKLFFPVVTFAKP-KSSRNSSIE-AFAVCENY 209 (316)
Q Consensus 180 l~~~F~~V~~~KP-~sSR~~S~E-~fvVc~gf 209 (316)
++..|..+.++.- ..+.. +.. .|++|..-
T Consensus 239 l~~vF~~v~~~~~~iP~~~-~g~~g~~~ask~ 269 (314)
T 2b2c_A 239 NRKIFPAVTYAQSIVSTYP-SGSMGYLICAKN 269 (314)
T ss_dssp HHHHCSEEEEEEEECTTSG-GGEEEEEEEESS
T ss_pred HHHHCCcceEEEEEecCcC-CCceEEEEEeCC
Confidence 8888998876531 11111 112 48887643
No 218
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.70 E-value=1.7e-08 Score=90.10 Aligned_cols=97 Identities=20% Similarity=0.245 Sum_probs=70.7
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CC-CCcEEEecCccChhh
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i-~gV~~i~gDIt~~~t 107 (316)
.++.+|||+|||+|.++..+++.++ ++++|+++|+++.. .+ ..++++++|+.+.
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~------------~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~-- 136 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLP------------PDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALAT-- 136 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSC------------TTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHH--
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCC------------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH--
Confidence 4678999999999999999998764 25799999999832 12 3588899998642
Q ss_pred HHHHHhhcCC--ccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEE
Q 021161 108 AEVVIRHFDG--CKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (316)
Q Consensus 108 ~~~I~~~~~~--~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~K 166 (316)
+..+. ..+ ++||+|++|+.. ..+ ...+..+.++|+|||.+++-
T Consensus 137 l~~l~--~~~~~~~fD~V~~d~~~--------~~~------~~~l~~~~~~LkpgG~lv~~ 181 (232)
T 3cbg_A 137 LEQLT--QGKPLPEFDLIFIDADK--------RNY------PRYYEIGLNLLRRGGLMVID 181 (232)
T ss_dssp HHHHH--TSSSCCCEEEEEECSCG--------GGH------HHHHHHHHHTEEEEEEEEEE
T ss_pred HHHHH--hcCCCCCcCEEEECCCH--------HHH------HHHHHHHHHHcCCCeEEEEe
Confidence 11111 122 689999999641 111 34577888999999999985
No 219
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.69 E-value=2.3e-08 Score=89.31 Aligned_cols=100 Identities=22% Similarity=0.311 Sum_probs=72.1
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCC-CcEEEecCccChhh
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITNART 107 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~-gV~~i~gDIt~~~t 107 (316)
.++.+|||+|||+|.++..+++.++ ..++|+++|+++.. .+. .+.++++|+.+.
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~------------~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~-- 124 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALP------------EDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALET-- 124 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSC------------TTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHH--
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCC------------CCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHH--
Confidence 4678999999999999999999874 24799999999842 233 388999998752
Q ss_pred HHHHHh---------hcCC--ccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEE
Q 021161 108 AEVVIR---------HFDG--CKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (316)
Q Consensus 108 ~~~I~~---------~~~~--~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Ki 167 (316)
...+.. .|.. ++||+|++++.. ..+ ...+..+.++|+|||.|++-.
T Consensus 125 ~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~--------~~~------~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 125 LQVLIDSKSAPSWASDFAFGPSSIDLFFLDADK--------ENY------PNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp HHHHHHCSSCCGGGTTTCCSTTCEEEEEECSCG--------GGH------HHHHHHHHHHEEEEEEEEEEC
T ss_pred HHHHHhhcccccccccccCCCCCcCEEEEeCCH--------HHH------HHHHHHHHHHcCCCeEEEEEc
Confidence 111111 1222 689999998531 111 245778889999999999864
No 220
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.68 E-value=1.4e-07 Score=90.03 Aligned_cols=106 Identities=22% Similarity=0.244 Sum_probs=78.2
Q ss_pred HhhhHHcCCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCC----CCCCCcEEEecCccCh
Q 021161 30 LQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM----APIEGVIQVQGDITNA 105 (316)
Q Consensus 30 ~qId~~f~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~----~~i~gV~~i~gDIt~~ 105 (316)
.++.+.+.-+.+..+|||+|||+|.++..++++.+ ..+++++|+..+ ...++|+++.+|+.+.
T Consensus 190 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p-------------~~~~~~~D~~~~~~~a~~~~~v~~~~~D~~~~ 256 (364)
T 3p9c_A 190 KKLLELYHGFEGLGTLVDVGGGVGATVAAIAAHYP-------------TIKGVNFDLPHVISEAPQFPGVTHVGGDMFKE 256 (364)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCT-------------TCEEEEEECHHHHTTCCCCTTEEEEECCTTTC
T ss_pred HHHHHhcccccCCCEEEEeCCCCCHHHHHHHHHCC-------------CCeEEEecCHHHHHhhhhcCCeEEEeCCcCCC
Confidence 34555665456789999999999999999999874 578999999433 1346899999999872
Q ss_pred hhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEc
Q 021161 106 RTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (316)
Q Consensus 106 ~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif 168 (316)
++.. |+|++... +|++... -+..+|..+.++|||||.|++.-+
T Consensus 257 ---------~p~~--D~v~~~~v-----lh~~~d~----~~~~~L~~~~~~L~pgG~l~i~e~ 299 (364)
T 3p9c_A 257 ---------VPSG--DTILMKWI-----LHDWSDQ----HCATLLKNCYDALPAHGKVVLVQC 299 (364)
T ss_dssp ---------CCCC--SEEEEESC-----GGGSCHH----HHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred ---------CCCC--CEEEehHH-----hccCCHH----HHHHHHHHHHHHcCCCCEEEEEEe
Confidence 3322 99998642 4555432 134568889999999999988643
No 221
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.67 E-value=2.4e-07 Score=87.71 Aligned_cols=105 Identities=21% Similarity=0.267 Sum_probs=76.2
Q ss_pred HhhhHHcCCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCC-CcEE
Q 021161 30 LQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQ 97 (316)
Q Consensus 30 ~qId~~f~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~-gV~~ 97 (316)
..+.+.+. +.++.+|||+|||+|.++..++++.+ ..+++++|+ +.. .+. +|++
T Consensus 180 ~~l~~~~~-~~~~~~vLDvG~G~G~~~~~l~~~~p-------------~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~ 244 (359)
T 1x19_A 180 QLLLEEAK-LDGVKKMIDVGGGIGDISAAMLKHFP-------------ELDSTILNL-PGAIDLVNENAAEKGVADRMRG 244 (359)
T ss_dssp HHHHHHCC-CTTCCEEEEESCTTCHHHHHHHHHCT-------------TCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEE
T ss_pred HHHHHhcC-CCCCCEEEEECCcccHHHHHHHHHCC-------------CCeEEEEec-HHHHHHHHHHHHhcCCCCCEEE
Confidence 34455555 46778999999999999999999863 479999999 632 233 4999
Q ss_pred EecCccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEc
Q 021161 98 VQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (316)
Q Consensus 98 i~gDIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif 168 (316)
+.+|+.+.. ++ .+|+|++... +|++.. .....+|..+.++|+|||.|++..+
T Consensus 245 ~~~d~~~~~--------~~--~~D~v~~~~v-----lh~~~d----~~~~~~l~~~~~~L~pgG~l~i~e~ 296 (359)
T 1x19_A 245 IAVDIYKES--------YP--EADAVLFCRI-----LYSANE----QLSTIMCKKAFDAMRSGGRLLILDM 296 (359)
T ss_dssp EECCTTTSC--------CC--CCSEEEEESC-----GGGSCH----HHHHHHHHHHHTTCCTTCEEEEEEE
T ss_pred EeCccccCC--------CC--CCCEEEEech-----hccCCH----HHHHHHHHHHHHhcCCCCEEEEEec
Confidence 999998742 22 3499998643 333332 1235668889999999999977553
No 222
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.66 E-value=3.1e-07 Score=85.82 Aligned_cols=105 Identities=18% Similarity=0.203 Sum_probs=76.0
Q ss_pred HhhhHHcCCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCC-----------CCCcEEE
Q 021161 30 LQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-----------IEGVIQV 98 (316)
Q Consensus 30 ~qId~~f~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~-----------i~gV~~i 98 (316)
..+.+.+.+ .+ .+|||+|||+|.++..++++.+ ..+++++|+..+.. -.+|+++
T Consensus 158 ~~~~~~~~~-~~-~~vlDvG~G~G~~~~~l~~~~p-------------~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~ 222 (334)
T 2ip2_A 158 HEIPRLLDF-RG-RSFVDVGGGSGELTKAILQAEP-------------SARGVMLDREGSLGVARDNLSSLLAGERVSLV 222 (334)
T ss_dssp HHHHHHSCC-TT-CEEEEETCTTCHHHHHHHHHCT-------------TCEEEEEECTTCTHHHHHHTHHHHHTTSEEEE
T ss_pred HHHHHhCCC-CC-CEEEEeCCCchHHHHHHHHHCC-------------CCEEEEeCcHHHHHHHHHHHhhcCCCCcEEEe
Confidence 345555554 44 8999999999999999998863 46999999933321 1469999
Q ss_pred ecCccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEc
Q 021161 99 QGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (316)
Q Consensus 99 ~gDIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif 168 (316)
++|+.+. ++ +.||+|++... +|+++.. -...+|..+.++|+|||.+++..+
T Consensus 223 ~~d~~~~---------~~-~~~D~v~~~~v-----l~~~~~~----~~~~~l~~~~~~L~pgG~l~i~e~ 273 (334)
T 2ip2_A 223 GGDMLQE---------VP-SNGDIYLLSRI-----IGDLDEA----ASLRLLGNCREAMAGDGRVVVIER 273 (334)
T ss_dssp ESCTTTC---------CC-SSCSEEEEESC-----GGGCCHH----HHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred cCCCCCC---------CC-CCCCEEEEchh-----ccCCCHH----HHHHHHHHHHHhcCCCCEEEEEEe
Confidence 9999862 23 57999998642 3444332 124667888999999999998643
No 223
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.66 E-value=8.9e-08 Score=88.18 Aligned_cols=104 Identities=11% Similarity=0.054 Sum_probs=66.0
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC------CCCCcEEEecCccChhhHHHHH
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVI 112 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~------~i~gV~~i~gDIt~~~t~~~I~ 112 (316)
+.++.+|||||||+|.++..|+++. .+|+|||+++.+ ..... .+++|+.+.... +.
T Consensus 43 l~~g~~VLDlGcGtG~~a~~La~~g---------------~~V~gvD~S~~ml~~Ar~~~~~~-~v~~~~~~~~~~--~~ 104 (261)
T 3iv6_A 43 IVPGSTVAVIGASTRFLIEKALERG---------------ASVTVFDFSQRMCDDLAEALADR-CVTIDLLDITAE--IP 104 (261)
T ss_dssp CCTTCEEEEECTTCHHHHHHHHHTT---------------CEEEEEESCHHHHHHHHHHTSSS-CCEEEECCTTSC--CC
T ss_pred CCCcCEEEEEeCcchHHHHHHHhcC---------------CEEEEEECCHHHHHHHHHHHHhc-cceeeeeecccc--cc
Confidence 3678899999999999999998753 589999999832 11111 233444332110 00
Q ss_pred hhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCC
Q 021161 113 RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK 171 (316)
Q Consensus 113 ~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~ 171 (316)
..+ .++||+|+|+... +.+.. .-...++..+.++| |||.+++.+..+.
T Consensus 105 ~~~-~~~fD~Vv~~~~l-----~~~~~----~~~~~~l~~l~~lL-PGG~l~lS~~~g~ 152 (261)
T 3iv6_A 105 KEL-AGHFDFVLNDRLI-----NRFTT----EEARRACLGMLSLV-GSGTVRASVKLGF 152 (261)
T ss_dssp GGG-TTCCSEEEEESCG-----GGSCH----HHHHHHHHHHHHHH-TTSEEEEEEEBSC
T ss_pred ccc-CCCccEEEEhhhh-----HhCCH----HHHHHHHHHHHHhC-cCcEEEEEeccCc
Confidence 011 3589999998643 21111 11245677778899 9999998776553
No 224
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.65 E-value=9.6e-08 Score=90.31 Aligned_cols=104 Identities=17% Similarity=0.122 Sum_probs=76.6
Q ss_pred hhhHHcCCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC--------C-CCCcEEEecC
Q 021161 31 QIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------P-IEGVIQVQGD 101 (316)
Q Consensus 31 qId~~f~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~--------~-i~gV~~i~gD 101 (316)
++.+.+.+ .++.+|||+|||+|.++..++++.+ ..+++++|+.++. . ..+|+++++|
T Consensus 175 ~~~~~~~~-~~~~~vLDvG~G~G~~~~~l~~~~p-------------~~~~~~~D~~~~~~~~~~~~~~~~~~v~~~~~d 240 (348)
T 3lst_A 175 ILARAGDF-PATGTVADVGGGRGGFLLTVLREHP-------------GLQGVLLDRAEVVARHRLDAPDVAGRWKVVEGD 240 (348)
T ss_dssp HHHHHSCC-CSSEEEEEETCTTSHHHHHHHHHCT-------------TEEEEEEECHHHHTTCCCCCGGGTTSEEEEECC
T ss_pred HHHHhCCc-cCCceEEEECCccCHHHHHHHHHCC-------------CCEEEEecCHHHhhcccccccCCCCCeEEEecC
Confidence 45556653 5678999999999999999999874 4689999986431 1 2358999999
Q ss_pred ccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEc
Q 021161 102 ITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (316)
Q Consensus 102 It~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif 168 (316)
+.+. ++ +||+|++... +|+++.. -+..+|..+.++|||||.|++..+
T Consensus 241 ~~~~---------~p--~~D~v~~~~v-----lh~~~d~----~~~~~L~~~~~~LkpgG~l~i~e~ 287 (348)
T 3lst_A 241 FLRE---------VP--HADVHVLKRI-----LHNWGDE----DSVRILTNCRRVMPAHGRVLVIDA 287 (348)
T ss_dssp TTTC---------CC--CCSEEEEESC-----GGGSCHH----HHHHHHHHHHHTCCTTCEEEEEEC
T ss_pred CCCC---------CC--CCcEEEEehh-----ccCCCHH----HHHHHHHHHHHhcCCCCEEEEEEe
Confidence 9732 33 7999998643 3444432 124668889999999999998643
No 225
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.65 E-value=2.7e-07 Score=84.70 Aligned_cols=125 Identities=14% Similarity=0.031 Sum_probs=86.1
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC------C---------CCCcEEEecCccC
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------P---------IEGVIQVQGDITN 104 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~------~---------i~gV~~i~gDIt~ 104 (316)
..+.+|||+|||.|+.+..++++ + .+|++||+++.. . .++++++.+|..+
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~-~--------------~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~ 135 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY-D--------------THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDL 135 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS-S--------------CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGS
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC-C--------------CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHH
Confidence 35689999999999988777654 2 589999999731 1 2468888899875
Q ss_pred hhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCC-C---HHHHHHHH
Q 021161 105 ARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK-D---TSLLYCQL 180 (316)
Q Consensus 105 ~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~-~---~~~l~~~l 180 (316)
. + ++||+|++|.. + .. ..+..+.++|+|||.|++..-... + ...+...+
T Consensus 136 ~---------~--~~fD~Ii~d~~-d------p~---------~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l 188 (262)
T 2cmg_A 136 D---------I--KKYDLIFCLQE-P------DI---------HRIDGLKRMLKEDGVFISVAKHPLLEHVSMQNALKNM 188 (262)
T ss_dssp C---------C--CCEEEEEESSC-C------CH---------HHHHHHHTTEEEEEEEEEEEECTTTCHHHHHHHHHHH
T ss_pred H---------H--hhCCEEEECCC-C------hH---------HHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHH
Confidence 2 2 57999999952 1 11 156788999999999999753321 2 34455667
Q ss_pred HhcCCceEEecC-CCCCCCCcceEEEEec
Q 021161 181 KLFFPVVTFAKP-KSSRNSSIEAFAVCEN 208 (316)
Q Consensus 181 ~~~F~~V~~~KP-~sSR~~S~E~fvVc~g 208 (316)
+..|..+..+.- ..+ ...-.|++|..
T Consensus 189 ~~~F~~~~~~~~~vP~--~g~~~~~~as~ 215 (262)
T 2cmg_A 189 GGVFSVAMPFVAPLRI--LSNKGYIYASF 215 (262)
T ss_dssp HTTCSEEEEECCTTCT--TCCEEEEEEES
T ss_pred HHhCCceEEEEEccCC--CcccEEEEeeC
Confidence 778988876642 222 22334777764
No 226
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.63 E-value=1.6e-07 Score=81.38 Aligned_cols=107 Identities=13% Similarity=0.012 Sum_probs=68.3
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC--------CCC--CcEEEecCccChhhHH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------PIE--GVIQVQGDITNARTAE 109 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~--------~i~--gV~~i~gDIt~~~t~~ 109 (316)
.++.+|||+|||+|.++..++++. ..+|+|+|+++.+ ... +++++++|+.+.
T Consensus 48 ~~~~~vlD~g~G~G~~~~~l~~~~--------------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~---- 109 (207)
T 1wy7_A 48 IEGKVVADLGAGTGVLSYGALLLG--------------AKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEF---- 109 (207)
T ss_dssp STTCEEEEETCTTCHHHHHHHHTT--------------CSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGC----
T ss_pred CCcCEEEEeeCCCCHHHHHHHHcC--------------CCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHc----
Confidence 467899999999999999998752 2489999999732 111 689999999863
Q ss_pred HHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCCCHHHHHHHHHh
Q 021161 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKL 182 (316)
Q Consensus 110 ~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~~~~~l~~~l~~ 182 (316)
+ .+||+|++|.+...... ..+ ...+..+.++| ||.++..+-.......+...+..
T Consensus 110 ------~-~~~D~v~~~~p~~~~~~-~~~--------~~~l~~~~~~l--~~~~~~~~~~~~~~~~~~~~l~~ 164 (207)
T 1wy7_A 110 ------N-SRVDIVIMNPPFGSQRK-HAD--------RPFLLKAFEIS--DVVYSIHLAKPEVRRFIEKFSWE 164 (207)
T ss_dssp ------C-CCCSEEEECCCCSSSST-TTT--------HHHHHHHHHHC--SEEEEEEECCHHHHHHHHHHHHH
T ss_pred ------C-CCCCEEEEcCCCccccC-Cch--------HHHHHHHHHhc--CcEEEEEeCCcCCHHHHHHHHHH
Confidence 2 48999999975432211 111 23355566667 66555432122223334444443
No 227
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.63 E-value=2.5e-07 Score=87.70 Aligned_cols=103 Identities=17% Similarity=0.224 Sum_probs=74.4
Q ss_pred hhHHcCCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CC-CCcEEEe
Q 021161 32 IDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQ 99 (316)
Q Consensus 32 Id~~f~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i-~gV~~i~ 99 (316)
+.+.+. +.++.+|||+|||+|.++..++++.+ ..+++++|+ +.. .+ .+|++++
T Consensus 174 ~~~~~~-~~~~~~vlDvG~G~G~~~~~l~~~~~-------------~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~ 238 (374)
T 1qzz_A 174 PADAYD-WSAVRHVLDVGGGNGGMLAAIALRAP-------------HLRGTLVEL-AGPAERARRRFADAGLADRVTVAE 238 (374)
T ss_dssp HHHTSC-CTTCCEEEEETCTTSHHHHHHHHHCT-------------TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEE
T ss_pred HHHhCC-CCCCCEEEEECCCcCHHHHHHHHHCC-------------CCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEe
Confidence 334444 35678999999999999999998863 479999999 621 12 3799999
Q ss_pred cCccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEc
Q 021161 100 GDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (316)
Q Consensus 100 gDIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif 168 (316)
+|+.+. ++ ..||+|++... +|+++.. -...+|..+.++|+|||.+++..+
T Consensus 239 ~d~~~~---------~~-~~~D~v~~~~v-----l~~~~~~----~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 239 GDFFKP---------LP-VTADVVLLSFV-----LLNWSDE----DALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp CCTTSC---------CS-CCEEEEEEESC-----GGGSCHH----HHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCCCCc---------CC-CCCCEEEEecc-----ccCCCHH----HHHHHHHHHHHhcCCCcEEEEEec
Confidence 999762 22 24999999753 2333322 123567888999999999998655
No 228
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.62 E-value=6e-08 Score=86.32 Aligned_cols=91 Identities=15% Similarity=0.203 Sum_probs=67.7
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCCcEEEecCccChhhH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~gV~~i~gDIt~~~t~ 108 (316)
.++.+|||+|||+|.++..+++..+ .+|+++|+++.. .+.+++++++|+....
T Consensus 90 ~~~~~vLdiG~G~G~~~~~la~~~~--------------~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-- 153 (235)
T 1jg1_A 90 KPGMNILEVGTGSGWNAALISEIVK--------------TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGF-- 153 (235)
T ss_dssp CTTCCEEEECCTTSHHHHHHHHHHC--------------SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC--
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHhC--------------CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccCC--
Confidence 5778999999999999999998872 589999999731 2457889999983211
Q ss_pred HHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEcc
Q 021161 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (316)
Q Consensus 109 ~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~ 169 (316)
-...+||+|+++.... ... ..+.++|+|||.+++.+..
T Consensus 154 ------~~~~~fD~Ii~~~~~~-----~~~------------~~~~~~L~pgG~lvi~~~~ 191 (235)
T 1jg1_A 154 ------PPKAPYDVIIVTAGAP-----KIP------------EPLIEQLKIGGKLIIPVGS 191 (235)
T ss_dssp ------GGGCCEEEEEECSBBS-----SCC------------HHHHHTEEEEEEEEEEECS
T ss_pred ------CCCCCccEEEECCcHH-----HHH------------HHHHHhcCCCcEEEEEEec
Confidence 1124599999986432 222 2457899999999997653
No 229
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.62 E-value=2.5e-07 Score=88.69 Aligned_cols=96 Identities=18% Similarity=-0.028 Sum_probs=69.6
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCCcEEEecCccC-hhhH
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITN-ARTA 108 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~gV~~i~gDIt~-~~t~ 108 (316)
++.+||||| |+|.++..+++.. ...+|+++|+++.+ .+.+|+++++|+.+ .+.
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~-------------~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~- 236 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSG-------------LPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPD- 236 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHT-------------CCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCT-
T ss_pred CCCEEEEEC-CCCHHHHHHHHhC-------------CCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchh-
Confidence 578999999 9999999998764 24699999998732 23479999999987 320
Q ss_pred HHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEE-EEEEcc
Q 021161 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKF-IAKIFR 169 (316)
Q Consensus 109 ~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~f-V~Kif~ 169 (316)
.+ .++||+|++|...... . ....+..+.++|||||.+ ++.+..
T Consensus 237 -----~~-~~~fD~Vi~~~p~~~~-----------~-~~~~l~~~~~~LkpgG~~~~~~~~~ 280 (373)
T 2qm3_A 237 -----YA-LHKFDTFITDPPETLE-----------A-IRAFVGRGIATLKGPRCAGYFGITR 280 (373)
T ss_dssp -----TT-SSCBSEEEECCCSSHH-----------H-HHHHHHHHHHTBCSTTCEEEEEECT
T ss_pred -----hc-cCCccEEEECCCCchH-----------H-HHHHHHHHHHHcccCCeEEEEEEec
Confidence 01 2579999999632111 1 256788899999999954 554543
No 230
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.61 E-value=2.1e-08 Score=91.87 Aligned_cols=114 Identities=17% Similarity=0.206 Sum_probs=67.6
Q ss_pred HHhhhHHcCC-cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCC----------------
Q 021161 29 LLQIDEEFNI-FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP---------------- 91 (316)
Q Consensus 29 L~qId~~f~~-~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~---------------- 91 (316)
+..+.+.+.. ..++.+|||||||+|.++..++... ..+|+|+|+++.+-
T Consensus 58 ~~~l~~~l~~~~~~~~~vLDiGcG~G~~~~l~~~~~--------------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~ 123 (289)
T 2g72_A 58 LRCLAQTFATGEVSGRTLIDIGSGPTVYQLLSACSH--------------FEDITMTDFLEVNRQELGRWLQEEPGAFNW 123 (289)
T ss_dssp HHHHHHHHHTSCSCCSEEEEETCTTCCGGGTTGGGG--------------CSEEEEECSCHHHHHHHHHHHTTCTTCCCC
T ss_pred HHHHHHHhCCCCCCCCeEEEECCCcChHHHHhhccC--------------CCeEEEeCCCHHHHHHHHHHHhhCcccccc
Confidence 3344444422 1367899999999999543333221 35999999998320
Q ss_pred ---------CCC----------------cEEEecCccC-hhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHH
Q 021161 92 ---------IEG----------------VIQVQGDITN-ARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQL 145 (316)
Q Consensus 92 ---------i~g----------------V~~i~gDIt~-~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L 145 (316)
+.+ +.++++|+++ .+... ..+..++||+|+|........ .+. .-
T Consensus 124 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~---~~~~~~~fD~V~~~~~l~~~~-~~~------~~ 193 (289)
T 2g72_A 124 SMYSQHACLIEGKGECWQDKERQLRARVKRVLPIDVHQPQPLGA---GSPAPLPADALVSAFCLEAVS-PDL------AS 193 (289)
T ss_dssp HHHHHHHHHHHCSCCCHHHHHHHHHHHEEEEECCCTTSSSTTCS---SCSSCSSEEEEEEESCHHHHC-SSH------HH
T ss_pred hhhhhHHHHhcCcccchhhhHHHHHhhhceEEecccCCCCCccc---cccCCCCCCEEEehhhhhhhc-CCH------HH
Confidence 011 3455668876 22000 012345799999975321100 001 11
Q ss_pred HHHHHHHHHHcccCCcEEEEE
Q 021161 146 ILAGLTVVTHVLKEGGKFIAK 166 (316)
Q Consensus 146 ~~aaL~~a~~vLkpGG~fV~K 166 (316)
...+|..+.++|||||.|++.
T Consensus 194 ~~~~l~~~~r~LkpGG~l~~~ 214 (289)
T 2g72_A 194 FQRALDHITTLLRPGGHLLLI 214 (289)
T ss_dssp HHHHHHHHHTTEEEEEEEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEE
Confidence 356788999999999999985
No 231
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.60 E-value=2e-07 Score=87.23 Aligned_cols=104 Identities=20% Similarity=0.211 Sum_probs=75.9
Q ss_pred hhhHHcCCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCC-CC----------CC-CCcEEE
Q 021161 31 QIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQP-MA----------PI-EGVIQV 98 (316)
Q Consensus 31 qId~~f~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~-~~----------~i-~gV~~i 98 (316)
++.+.+. +.+..+|||+|||+|.++..++++.+ ..+++++|+ + +. .+ ++|++.
T Consensus 160 ~~~~~~~-~~~~~~vlDvG~G~G~~~~~l~~~~p-------------~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~ 224 (332)
T 3i53_A 160 GIAAKYD-WAALGHVVDVGGGSGGLLSALLTAHE-------------DLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVV 224 (332)
T ss_dssp TGGGSSC-CGGGSEEEEETCTTSHHHHHHHHHCT-------------TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEE
T ss_pred HHHHhCC-CCCCCEEEEeCCChhHHHHHHHHHCC-------------CCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEe
Confidence 4444454 35568999999999999999998874 578999999 5 21 12 569999
Q ss_pred ecCccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEc
Q 021161 99 QGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (316)
Q Consensus 99 ~gDIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif 168 (316)
.+|+.+. ++. .||+|++... +|+++... +..+|..+.++|+|||.+++..+
T Consensus 225 ~~d~~~~---------~p~-~~D~v~~~~v-----lh~~~~~~----~~~~l~~~~~~L~pgG~l~i~e~ 275 (332)
T 3i53_A 225 VGSFFDP---------LPA-GAGGYVLSAV-----LHDWDDLS----AVAILRRCAEAAGSGGVVLVIEA 275 (332)
T ss_dssp ECCTTSC---------CCC-SCSEEEEESC-----GGGSCHHH----HHHHHHHHHHHHTTTCEEEEEEC
T ss_pred cCCCCCC---------CCC-CCcEEEEehh-----hccCCHHH----HHHHHHHHHHhcCCCCEEEEEee
Confidence 9999742 333 7999999642 34444321 24567888999999999998644
No 232
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.59 E-value=7.1e-07 Score=82.07 Aligned_cols=113 Identities=19% Similarity=-0.014 Sum_probs=70.7
Q ss_pred hhhhHHhhhHHcCCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeC-CCCC-------------
Q 021161 25 SAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDL-QPMA------------- 90 (316)
Q Consensus 25 sa~KL~qId~~f~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl-~~~~------------- 90 (316)
+...|.+....+.-..++.+|||||||+|.++..+++.. ..+|+|+|+ ++.+
T Consensus 63 ~~~~l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~~--------------~~~v~~~D~s~~~~~~~a~~n~~~N~~ 128 (281)
T 3bzb_A 63 GARALADTLCWQPELIAGKTVCELGAGAGLVSIVAFLAG--------------ADQVVATDYPDPEILNSLESNIREHTA 128 (281)
T ss_dssp HHHHHHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHTT--------------CSEEEEEECSCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHhcchhcCCCeEEEecccccHHHHHHHHcC--------------CCEEEEEeCCCHHHHHHHHHHHHHhhh
Confidence 345555554443323567899999999999999888742 248999999 6521
Q ss_pred C---C-----CCcEEEecCccChhhHHHHHhhcCCccccEEEe-CCCCCCCCCCCccHHHHHHHHHHHHHHHHHccc---
Q 021161 91 P---I-----EGVIQVQGDITNARTAEVVIRHFDGCKADLVVC-DGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLK--- 158 (316)
Q Consensus 91 ~---i-----~gV~~i~gDIt~~~t~~~I~~~~~~~~~DlVvs-DgapdvtG~~~~de~~~~~L~~aaL~~a~~vLk--- 158 (316)
. + .++++...|..+.. ..+...+..++||+|++ |.. +.... ....+..+.++|+
T Consensus 129 ~~~~~~~~~~~~v~~~~~~~~~~~--~~~~~~~~~~~fD~Ii~~dvl------~~~~~------~~~ll~~l~~~Lk~~~ 194 (281)
T 3bzb_A 129 NSCSSETVKRASPKVVPYRWGDSP--DSLQRCTGLQRFQVVLLADLL------SFHQA------HDALLRSVKMLLALPA 194 (281)
T ss_dssp ----------CCCEEEECCTTSCT--HHHHHHHSCSSBSEEEEESCC------SCGGG------HHHHHHHHHHHBCCTT
T ss_pred hhcccccCCCCCeEEEEecCCCcc--HHHHhhccCCCCCEEEEeCcc------cChHH------HHHHHHHHHHHhcccC
Confidence 1 1 25667766655421 11222224578999998 421 11211 2345677888999
Q ss_pred C--CcEEEE
Q 021161 159 E--GGKFIA 165 (316)
Q Consensus 159 p--GG~fV~ 165 (316)
| ||.+++
T Consensus 195 p~~gG~l~v 203 (281)
T 3bzb_A 195 NDPTAVALV 203 (281)
T ss_dssp TCTTCEEEE
T ss_pred CCCCCEEEE
Confidence 9 998876
No 233
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.59 E-value=1.9e-07 Score=89.00 Aligned_cols=99 Identities=17% Similarity=0.158 Sum_probs=72.5
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----------CC-CCcEEEecCccChhhH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PI-EGVIQVQGDITNARTA 108 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----------~i-~gV~~i~gDIt~~~t~ 108 (316)
.+..+|||+|||+|.++..++++.+ ..+++++|+..+. .+ .+|+++.+|+.+...
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p-------------~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~- 243 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNK-------------EVEVTIVDLPQQLEMMRKQTAGLSGSERIHGHGANLLDRDV- 243 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHST-------------TCEEEEEECHHHHHHHHHHHTTCTTGGGEEEEECCCCSSSC-
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCC-------------CCEEEEEeCHHHHHHHHHHHHhcCcccceEEEEccccccCC-
Confidence 4678999999999999999999863 5799999993321 12 368999999987410
Q ss_pred HHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEE
Q 021161 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (316)
Q Consensus 109 ~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Ki 167 (316)
.++ +.||+|++... +|++... -+..+|..+.++|||||.|++..
T Consensus 244 -----~~p-~~~D~v~~~~v-----lh~~~~~----~~~~~l~~~~~~L~pgG~l~i~e 287 (363)
T 3dp7_A 244 -----PFP-TGFDAVWMSQF-----LDCFSEE----EVISILTRVAQSIGKDSKVYIME 287 (363)
T ss_dssp -----CCC-CCCSEEEEESC-----STTSCHH----HHHHHHHHHHHHCCTTCEEEEEE
T ss_pred -----CCC-CCcCEEEEech-----hhhCCHH----HHHHHHHHHHHhcCCCcEEEEEe
Confidence 023 57999998642 3444432 12456788899999999998854
No 234
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.58 E-value=1.6e-07 Score=84.77 Aligned_cols=110 Identities=13% Similarity=0.065 Sum_probs=79.4
Q ss_pred CCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCC-CcEEEecCccC
Q 021161 37 NIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITN 104 (316)
Q Consensus 37 ~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~-gV~~i~gDIt~ 104 (316)
.+++++.+|+|+|||+|.++..+++.. +..+|+|+|+++.+ .+. .|++.++|..+
T Consensus 11 ~~v~~g~~VlDIGtGsG~l~i~la~~~-------------~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~ 77 (225)
T 3kr9_A 11 SFVSQGAILLDVGSDHAYLPIELVERG-------------QIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLA 77 (225)
T ss_dssp TTSCTTEEEEEETCSTTHHHHHHHHTT-------------SEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGG
T ss_pred HhCCCCCEEEEeCCCcHHHHHHHHHhC-------------CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhh
Confidence 346788999999999999999999864 24689999999842 243 48899999865
Q ss_pred hhhHHHHHhhcCCc-cccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCCCHHHHHHHHHhc
Q 021161 105 ARTAEVVIRHFDGC-KADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLF 183 (316)
Q Consensus 105 ~~t~~~I~~~~~~~-~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~~~~~l~~~l~~~ 183 (316)
. +... +||+|+..|+ | ..++...+..+...|+++|+||+.-. .....+...|...
T Consensus 78 ~---------l~~~~~~D~IviaG~----G---------g~~i~~Il~~~~~~L~~~~~lVlq~~--~~~~~vr~~L~~~ 133 (225)
T 3kr9_A 78 A---------FEETDQVSVITIAGM----G---------GRLIARILEEGLGKLANVERLILQPN--NREDDLRIWLQDH 133 (225)
T ss_dssp G---------CCGGGCCCEEEEEEE----C---------HHHHHHHHHHTGGGCTTCCEEEEEES--SCHHHHHHHHHHT
T ss_pred h---------cccCcCCCEEEEcCC----C---------hHHHHHHHHHHHHHhCCCCEEEEECC--CCHHHHHHHHHHC
Confidence 3 3323 6998886442 1 12345667788899999999998654 3556666555543
No 235
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.57 E-value=1.3e-07 Score=87.70 Aligned_cols=99 Identities=20% Similarity=0.186 Sum_probs=67.6
Q ss_pred CCCeEEEECCCCCH----HHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC------CC------------------
Q 021161 41 GVKRVVDLCAAPGS----WSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PI------------------ 92 (316)
Q Consensus 41 ~~~rVLDLcagPG~----wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~------~i------------------ 92 (316)
+..+|+|+|||+|- .+..|++.++.. ..+.+|+|+|+++.+ .+
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~---------~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f 175 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMA---------PGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYF 175 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSC---------TTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHE
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccC---------CCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHh
Confidence 45799999999998 556667765410 013599999999731 10
Q ss_pred ------------------CCcEEEecCccChhhHHHHHhhcC-CccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHH
Q 021161 93 ------------------EGVIQVQGDITNARTAEVVIRHFD-GCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVV 153 (316)
Q Consensus 93 ------------------~gV~~i~gDIt~~~t~~~I~~~~~-~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a 153 (316)
..|.+.++|+.+.+ +. .++||+|+|.. +- +-.+. .....++...
T Consensus 176 ~~~~~~~~~~~~v~~~lr~~V~F~~~dl~~~~--------~~~~~~fDlI~crn---vl--iyf~~----~~~~~vl~~~ 238 (274)
T 1af7_A 176 MRGTGPHEGLVRVRQELANYVEFSSVNLLEKQ--------YNVPGPFDAIFCRN---VM--IYFDK----TTQEDILRRF 238 (274)
T ss_dssp EECCTTSCSEEEECHHHHTTEEEEECCTTCSS--------CCCCCCEEEEEECS---SG--GGSCH----HHHHHHHHHH
T ss_pred hccccCCCCceeechhhcccCeEEecccCCCC--------CCcCCCeeEEEECC---ch--HhCCH----HHHHHHHHHH
Confidence 14788899988742 22 35899999952 21 11232 2345678889
Q ss_pred HHcccCCcEEEE
Q 021161 154 THVLKEGGKFIA 165 (316)
Q Consensus 154 ~~vLkpGG~fV~ 165 (316)
.+.|+|||.|++
T Consensus 239 ~~~L~pgG~L~l 250 (274)
T 1af7_A 239 VPLLKPDGLLFA 250 (274)
T ss_dssp GGGEEEEEEEEE
T ss_pred HHHhCCCcEEEE
Confidence 999999999987
No 236
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.56 E-value=3.2e-07 Score=86.77 Aligned_cols=97 Identities=19% Similarity=0.270 Sum_probs=72.9
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCC----CCCCCcEEEecCccChhhHHHHHhh
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM----APIEGVIQVQGDITNARTAEVVIRH 114 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~----~~i~gV~~i~gDIt~~~t~~~I~~~ 114 (316)
+.++.+|||+|||+|.++..++++.+ ..+++++|+..+ ...++|+++++|+.+.
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p-------------~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~~--------- 243 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFP-------------KLKCIVFDRPQVVENLSGSNNLTYVGGDMFTS--------- 243 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCT-------------TCEEEEEECHHHHTTCCCBTTEEEEECCTTTC---------
T ss_pred cccCceEEEeCCCccHHHHHHHHHCC-------------CCeEEEeeCHHHHhhcccCCCcEEEeccccCC---------
Confidence 45778999999999999999998863 468999999322 1356799999999762
Q ss_pred cCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccC---CcEEEEEEc
Q 021161 115 FDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKE---GGKFIAKIF 168 (316)
Q Consensus 115 ~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkp---GG~fV~Kif 168 (316)
++ .||+|++... +|++... -+..+|..+.++||| ||.|++..+
T Consensus 244 ~p--~~D~v~~~~~-----lh~~~d~----~~~~~l~~~~~~L~p~~~gG~l~i~e~ 289 (352)
T 1fp2_A 244 IP--NADAVLLKYI-----LHNWTDK----DCLRILKKCKEAVTNDGKRGKVTIIDM 289 (352)
T ss_dssp CC--CCSEEEEESC-----GGGSCHH----HHHHHHHHHHHHHSGGGCCCEEEEEEC
T ss_pred CC--CccEEEeehh-----hccCCHH----HHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 23 3999998643 3444332 124668889999999 999988654
No 237
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.55 E-value=4.1e-07 Score=86.81 Aligned_cols=105 Identities=17% Similarity=0.205 Sum_probs=76.9
Q ss_pred HhhhHHcCCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCC-C----------C-CCCcEE
Q 021161 30 LQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-A----------P-IEGVIQ 97 (316)
Q Consensus 30 ~qId~~f~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~-~----------~-i~gV~~ 97 (316)
..+.+.+.+ .++.+|||+|||+|.++..++++.+ ..+++++|+ +. . . -.+|++
T Consensus 192 ~~l~~~~~~-~~~~~vlDvG~G~G~~~~~l~~~~p-------------~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~ 256 (369)
T 3gwz_A 192 GQVAAAYDF-SGAATAVDIGGGRGSLMAAVLDAFP-------------GLRGTLLER-PPVAEEARELLTGRGLADRCEI 256 (369)
T ss_dssp HHHHHHSCC-TTCSEEEEETCTTSHHHHHHHHHCT-------------TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEE
T ss_pred HHHHHhCCC-ccCcEEEEeCCCccHHHHHHHHHCC-------------CCeEEEEcC-HHHHHHHHHhhhhcCcCCceEE
Confidence 345555553 5678999999999999999999863 579999999 52 1 1 246999
Q ss_pred EecCccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEc
Q 021161 98 VQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (316)
Q Consensus 98 i~gDIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif 168 (316)
+.+|+.+. ++. .||+|++... +|+++... +...|..+.++|+|||.|++-.+
T Consensus 257 ~~~d~~~~---------~p~-~~D~v~~~~v-----lh~~~d~~----~~~~L~~~~~~L~pgG~l~i~e~ 308 (369)
T 3gwz_A 257 LPGDFFET---------IPD-GADVYLIKHV-----LHDWDDDD----VVRILRRIATAMKPDSRLLVIDN 308 (369)
T ss_dssp EECCTTTC---------CCS-SCSEEEEESC-----GGGSCHHH----HHHHHHHHHTTCCTTCEEEEEEE
T ss_pred eccCCCCC---------CCC-CceEEEhhhh-----hccCCHHH----HHHHHHHHHHHcCCCCEEEEEEe
Confidence 99999842 333 7999998643 24444321 23567889999999999998543
No 238
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.53 E-value=1.4e-07 Score=89.14 Aligned_cols=122 Identities=14% Similarity=0.040 Sum_probs=80.3
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCCcEEEecCccChhhH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~gV~~i~gDIt~~~t~ 108 (316)
.++.+|+|+|||+|+++..+++++... .+....|+|+|+++.+ .+ .+.+.++|....
T Consensus 129 ~~~~~VlDp~cGsG~~l~~~~~~~~~~--------~~~~~~v~GiDi~~~~~~~a~~n~~~~g~-~~~i~~~D~l~~--- 196 (344)
T 2f8l_A 129 KKNVSILDPACGTANLLTTVINQLELK--------GDVDVHASGVDVDDLLISLALVGADLQRQ-KMTLLHQDGLAN--- 196 (344)
T ss_dssp CSEEEEEETTCTTSHHHHHHHHHHHTT--------SSCEEEEEEEESCHHHHHHHHHHHHHHTC-CCEEEESCTTSC---
T ss_pred CCCCEEEeCCCCccHHHHHHHHHHHHh--------cCCCceEEEEECCHHHHHHHHHHHHhCCC-CceEEECCCCCc---
Confidence 356799999999999999999887410 0112689999999842 12 578889998763
Q ss_pred HHHHhhcCCccccEEEeCCCCCCCCCCCccHHH----------HHHHHHHHHHHHHHcccCCcEEEEEE----ccCCCHH
Q 021161 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFV----------QSQLILAGLTVVTHVLKEGGKFIAKI----FRGKDTS 174 (316)
Q Consensus 109 ~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~----------~~~L~~aaL~~a~~vLkpGG~fV~Ki----f~~~~~~ 174 (316)
....+||+|++|.+... ...++.. ........+..+.+.|+|||.+++-+ |.+....
T Consensus 197 ------~~~~~fD~Ii~NPPfg~---~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~~~~ 267 (344)
T 2f8l_A 197 ------LLVDPVDVVISDLPVGY---YPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFA 267 (344)
T ss_dssp ------CCCCCEEEEEEECCCSE---ESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGSTTHH
T ss_pred ------cccCCccEEEECCCCCC---cCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCCchHH
Confidence 22468999999975321 1111000 00011345778889999999999866 4565666
Q ss_pred HHHHHHHh
Q 021161 175 LLYCQLKL 182 (316)
Q Consensus 175 ~l~~~l~~ 182 (316)
.+...+..
T Consensus 268 ~ir~~l~~ 275 (344)
T 2f8l_A 268 KVDKFIKK 275 (344)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 66555443
No 239
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.53 E-value=2.2e-07 Score=89.42 Aligned_cols=132 Identities=18% Similarity=0.150 Sum_probs=83.4
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC--------C------C-----CCcEEEecC
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------P------I-----EGVIQVQGD 101 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~--------~------i-----~gV~~i~gD 101 (316)
++.+|||||+|.|+.+..++++. ..+|++||+++.. + + ++++++.+|
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~--------------~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~D 253 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLK--------------PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIED 253 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTC--------------CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESC
T ss_pred CCCEEEEEECChhHHHHHHHHCC--------------CCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECc
Confidence 56899999999999998887652 2689999999831 1 1 168899999
Q ss_pred ccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCCC--HHHHHH-
Q 021161 102 ITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKD--TSLLYC- 178 (316)
Q Consensus 102 It~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~~--~~~l~~- 178 (316)
.... ++... -.+++||+|++|..-...|. ...+..........+..+.++|+|||.|++..-...- ...++.
T Consensus 254 a~~~--L~~~~--~~~~~fDvII~D~~d~P~~~-~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~~~~e~~~~~~~ 328 (364)
T 2qfm_A 254 CIPV--LKRYA--KEGREFDYVINDLTAVPIST-SPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLYEE 328 (364)
T ss_dssp HHHH--HHHHH--HHTCCEEEEEEECCSSCCCC-C----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHHHHHHH
T ss_pred HHHH--HHhhh--ccCCCceEEEECCCCcccCc-CchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCcchHHHHHHHHH
Confidence 8763 11110 02468999999973201111 0111111223344455668999999999987544322 223333
Q ss_pred HHHhcCCceEEec
Q 021161 179 QLKLFFPVVTFAK 191 (316)
Q Consensus 179 ~l~~~F~~V~~~K 191 (316)
+++..|..|.+.|
T Consensus 329 ~l~~~F~~v~~~~ 341 (364)
T 2qfm_A 329 QLGRLYCPVEFSK 341 (364)
T ss_dssp HHTTSSSCEEEEE
T ss_pred HHHHhCCceEEee
Confidence 4788999998743
No 240
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.53 E-value=1.1e-07 Score=94.67 Aligned_cols=94 Identities=17% Similarity=0.256 Sum_probs=67.8
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----------CC-CCcEEEecCccChhhH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PI-EGVIQVQGDITNARTA 108 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----------~i-~gV~~i~gDIt~~~t~ 108 (316)
.++.+|||+|||+|.++..+++. + ..+|+|+|++++. .+ .+|+++++|+.+..
T Consensus 157 ~~~~~VLDiGcGtG~la~~la~~-~-------------~~~V~gvD~s~~l~~A~~~~~~~gl~~~v~~~~~d~~~~~-- 220 (480)
T 3b3j_A 157 FKDKIVLDVGCGSGILSFFAAQA-G-------------ARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVS-- 220 (480)
T ss_dssp TTTCEEEEESCSTTHHHHHHHHT-T-------------CSEEEEEECHHHHHHHHHHHHHTTCTTTEEEEESCTTTCC--
T ss_pred cCCCEEEEecCcccHHHHHHHHc-C-------------CCEEEEEEcHHHHHHHHHHHHHcCCCCcEEEEECchhhCc--
Confidence 36789999999999999988873 2 3699999999842 13 46899999998742
Q ss_pred HHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEE
Q 021161 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (316)
Q Consensus 109 ~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~ 165 (316)
+. ++||+|+|++.. .+..++. ....+..+.++|||||.|+.
T Consensus 221 ------~~-~~fD~Ivs~~~~----~~~~~e~-----~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 221 ------LP-EQVDIIISEPMG----YMLFNER-----MLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp ------CS-SCEEEEECCCCH----HHHTCHH-----HHHHHHHGGGGEEEEEEEES
T ss_pred ------cC-CCeEEEEEeCch----HhcCcHH-----HHHHHHHHHHhcCCCCEEEE
Confidence 22 589999997531 1111111 23345567899999999984
No 241
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.53 E-value=8.5e-07 Score=83.65 Aligned_cols=103 Identities=17% Similarity=0.299 Sum_probs=73.9
Q ss_pred hHHcCCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CC-CCcEEEec
Q 021161 33 DEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQG 100 (316)
Q Consensus 33 d~~f~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i-~gV~~i~g 100 (316)
.+.+. +.++.+|||+|||+|.++..++++.+ ..+++++|+ +.+ .+ .+|+++++
T Consensus 176 ~~~~~-~~~~~~vLDvG~G~G~~~~~l~~~~~-------------~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~ 240 (360)
T 1tw3_A 176 AAAYD-WTNVRHVLDVGGGKGGFAAAIARRAP-------------HVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEG 240 (360)
T ss_dssp HHHSC-CTTCSEEEEETCTTSHHHHHHHHHCT-------------TCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEEC
T ss_pred HHhCC-CccCcEEEEeCCcCcHHHHHHHHhCC-------------CCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeC
Confidence 34444 35678999999999999999998863 479999999 531 12 27999999
Q ss_pred CccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEcc
Q 021161 101 DITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (316)
Q Consensus 101 DIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~ 169 (316)
|+.+. ++ ..||+|++... +|++... -....+..+.++|+|||.|++..+.
T Consensus 241 d~~~~---------~~-~~~D~v~~~~v-----l~~~~~~----~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 241 DFFEP---------LP-RKADAIILSFV-----LLNWPDH----DAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp CTTSC---------CS-SCEEEEEEESC-----GGGSCHH----HHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCCCC---------CC-CCccEEEEccc-----ccCCCHH----HHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 99762 22 24999998653 2333322 1245678889999999999986543
No 242
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.51 E-value=2.6e-07 Score=83.60 Aligned_cols=111 Identities=13% Similarity=-0.028 Sum_probs=79.0
Q ss_pred CCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCC-CcEEEecCccC
Q 021161 37 NIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITN 104 (316)
Q Consensus 37 ~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~-gV~~i~gDIt~ 104 (316)
.+++++.+|+|+|||+|.++..+++.. +..+|+|+|+++.+ .+. .|++.+||..+
T Consensus 17 ~~v~~g~~VlDIGtGsG~l~i~la~~~-------------~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~ 83 (230)
T 3lec_A 17 NYVPKGARLLDVGSDHAYLPIFLLQMG-------------YCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLS 83 (230)
T ss_dssp TTSCTTEEEEEETCSTTHHHHHHHHTT-------------CEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGG
T ss_pred HhCCCCCEEEEECCchHHHHHHHHHhC-------------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhh
Confidence 456788999999999999999999864 24689999999842 233 48999999876
Q ss_pred hhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCCCHHHHHHHHHhc
Q 021161 105 ARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLF 183 (316)
Q Consensus 105 ~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~~~~~l~~~l~~~ 183 (316)
.. .++.+||+|+.-|. . ..++...|..+...|+++|.||+.-.. ....+...|...
T Consensus 84 ~~--------~~~~~~D~IviaGm------G-------g~lI~~IL~~~~~~l~~~~~lIlqp~~--~~~~lr~~L~~~ 139 (230)
T 3lec_A 84 AF--------EEADNIDTITICGM------G-------GRLIADILNNDIDKLQHVKTLVLQPNN--REDDLRKWLAAN 139 (230)
T ss_dssp GC--------CGGGCCCEEEEEEE------C-------HHHHHHHHHHTGGGGTTCCEEEEEESS--CHHHHHHHHHHT
T ss_pred cc--------ccccccCEEEEeCC------c-------hHHHHHHHHHHHHHhCcCCEEEEECCC--ChHHHHHHHHHC
Confidence 42 12237999875331 1 134455677778899999999986543 355666555543
No 243
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.50 E-value=1.2e-07 Score=92.10 Aligned_cols=94 Identities=19% Similarity=0.096 Sum_probs=69.6
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCC--cEEEecCccChh
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEG--VIQVQGDITNAR 106 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~g--V~~i~gDIt~~~ 106 (316)
+++.+|||||||+|+++..++++.+ ...+|++||+++.+ .+.+ ++++++|+.+.
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~------------ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~- 117 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETS------------CVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFF- 117 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCS------------CEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHH-
T ss_pred CCCCEEEECCCcccHHHHHHHHhCC------------CCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHH-
Confidence 4678999999999999999998763 12589999999842 2444 88899998652
Q ss_pred hHHHHHh-hcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEE
Q 021161 107 TAEVVIR-HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (316)
Q Consensus 107 t~~~I~~-~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Ki 167 (316)
+. .+ .++||+|++|. + |. . ...+..+.++|++||.+++..
T Consensus 118 -----l~~~~-~~~fD~V~lDP-~---g~--~---------~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 118 -----LRKEW-GFGFDYVDLDP-F---GT--P---------VPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp -----HHSCC-SSCEEEEEECC-S---SC--C---------HHHHHHHHHHEEEEEEEEEEE
T ss_pred -----HHHhh-CCCCcEEEECC-C---cC--H---------HHHHHHHHHHhCCCCEEEEEe
Confidence 22 23 35799999996 2 11 1 124567788899999888765
No 244
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.49 E-value=3.8e-07 Score=89.75 Aligned_cols=98 Identities=13% Similarity=0.046 Sum_probs=68.8
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC------------------C--CCCcEEE
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------------------P--IEGVIQV 98 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~------------------~--i~gV~~i 98 (316)
+.++.+|||||||+|.++..+++..+ ..+|+|||+++.+ . +.+|+++
T Consensus 240 l~~g~~VLDLGCGsG~la~~LA~~~g-------------~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i 306 (433)
T 1u2z_A 240 LKKGDTFMDLGSGVGNCVVQAALECG-------------CALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFS 306 (433)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHC-------------CSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEE
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHCC-------------CCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEE
Confidence 36789999999999999999998864 3589999999731 1 3578888
Q ss_pred ecCccC-hhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEE
Q 021161 99 QGDITN-ARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (316)
Q Consensus 99 ~gDIt~-~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~K 166 (316)
++|... ...... ...+||+|+++... +. +. ...+|..+.++|||||.||+-
T Consensus 307 ~gD~~~~~~~~~~-----~~~~FDvIvvn~~l-----~~--~d-----~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 307 LKKSFVDNNRVAE-----LIPQCDVILVNNFL-----FD--ED-----LNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp ESSCSTTCHHHHH-----HGGGCSEEEECCTT-----CC--HH-----HHHHHHHHHTTCCTTCEEEES
T ss_pred EcCcccccccccc-----ccCCCCEEEEeCcc-----cc--cc-----HHHHHHHHHHhCCCCeEEEEe
Confidence 886543 211110 12589999986422 11 11 124567888999999999984
No 245
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.49 E-value=5.7e-07 Score=77.60 Aligned_cols=105 Identities=15% Similarity=0.020 Sum_probs=67.4
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC------CCCCcEEEecCccChhhHHHHHh
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIR 113 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~------~i~gV~~i~gDIt~~~t~~~I~~ 113 (316)
.++.+|||+|||+|.++..+++. + ..+|+|+|+++.+ ...+++++++|+.+.
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~-~-------------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~~-------- 107 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLL-G-------------AESVTAFDIDPDAIETAKRNCGGVNFMVADVSEI-------- 107 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHT-T-------------BSEEEEEESCHHHHHHHHHHCTTSEEEECCGGGC--------
T ss_pred CCCCEEEEEeCCccHHHHHHHHc-C-------------CCEEEEEECCHHHHHHHHHhcCCCEEEECcHHHC--------
Confidence 46789999999999999999875 2 2479999999842 133899999999863
Q ss_pred hcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCCCHHHHHHHHHh
Q 021161 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKL 182 (316)
Q Consensus 114 ~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~~~~~l~~~l~~ 182 (316)
+ ++||+|++|++...... ......+..+.++| |+.+++ ........+...++.
T Consensus 108 --~-~~~D~v~~~~p~~~~~~---------~~~~~~l~~~~~~~--g~~~~~--~~~~~~~~~~~~~~~ 160 (200)
T 1ne2_A 108 --S-GKYDTWIMNPPFGSVVK---------HSDRAFIDKAFETS--MWIYSI--GNAKARDFLRREFSA 160 (200)
T ss_dssp --C-CCEEEEEECCCC----------------CHHHHHHHHHHE--EEEEEE--EEGGGHHHHHHHHHH
T ss_pred --C-CCeeEEEECCCchhccC---------chhHHHHHHHHHhc--CcEEEE--EcCchHHHHHHHHHH
Confidence 2 58999999975422110 01123456666777 553333 333334444444443
No 246
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.49 E-value=1.9e-07 Score=85.32 Aligned_cols=112 Identities=13% Similarity=0.021 Sum_probs=79.9
Q ss_pred CCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCC-CcEEEecCccC
Q 021161 37 NIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITN 104 (316)
Q Consensus 37 ~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~-gV~~i~gDIt~ 104 (316)
.++.++.+|+|+|||+|.++..+++.. +..+|+|+|+++.+ .+. .|++.++|..+
T Consensus 17 ~~v~~g~~VlDIGtGsG~l~i~la~~~-------------~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~ 83 (244)
T 3gnl_A 17 SYITKNERIADIGSDHAYLPCFAVKNQ-------------TASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLA 83 (244)
T ss_dssp TTCCSSEEEEEETCSTTHHHHHHHHTT-------------SEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGG
T ss_pred HhCCCCCEEEEECCccHHHHHHHHHhC-------------CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhh
Confidence 456788999999999999999999864 24689999999842 233 48899999876
Q ss_pred hhhHHHHHhhcCC-ccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCCCHHHHHHHHHhc
Q 021161 105 ARTAEVVIRHFDG-CKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLF 183 (316)
Q Consensus 105 ~~t~~~I~~~~~~-~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~~~~~l~~~l~~~ 183 (316)
. +.. .+||+|+.-|+ . ..++...|..+...|+++|+||+.-.. ....+...|...
T Consensus 84 ~---------~~~~~~~D~Iviagm------G-------g~lI~~IL~~~~~~L~~~~~lIlq~~~--~~~~lr~~L~~~ 139 (244)
T 3gnl_A 84 V---------IEKKDAIDTIVIAGM------G-------GTLIRTILEEGAAKLAGVTKLILQPNI--AAWQLREWSEQN 139 (244)
T ss_dssp G---------CCGGGCCCEEEEEEE------C-------HHHHHHHHHHTGGGGTTCCEEEEEESS--CHHHHHHHHHHH
T ss_pred c---------cCccccccEEEEeCC------c-------hHHHHHHHHHHHHHhCCCCEEEEEcCC--ChHHHHHHHHHC
Confidence 4 222 35999886431 1 134556677788999999999986543 455565555443
Q ss_pred -CC
Q 021161 184 -FP 185 (316)
Q Consensus 184 -F~ 185 (316)
|.
T Consensus 140 Gf~ 142 (244)
T 3gnl_A 140 NWL 142 (244)
T ss_dssp TEE
T ss_pred CCE
Confidence 53
No 247
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.48 E-value=7e-07 Score=82.94 Aligned_cols=111 Identities=13% Similarity=0.147 Sum_probs=68.8
Q ss_pred CCCeEEEECCCC--CHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCCcEEEecCccChhh
Q 021161 41 GVKRVVDLCAAP--GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNART 107 (316)
Q Consensus 41 ~~~rVLDLcagP--G~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~gV~~i~gDIt~~~t 107 (316)
+..+|||||||+ ++.+..++++.. ++.+|++||.++.+ +..+++++++|+++...
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~------------P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~ 145 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVA------------PESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPAS 145 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHC------------TTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHH
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHC------------CCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhh
Confidence 457999999997 445555555543 46899999999842 11248999999999742
Q ss_pred H---HHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCC
Q 021161 108 A---EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK 171 (316)
Q Consensus 108 ~---~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~ 171 (316)
. ......|+-.....|++++.... -.|+.. ...++....+.|+|||.|++..+...
T Consensus 146 ~l~~~~~~~~~D~~~p~av~~~avLH~----l~d~~~----p~~~l~~l~~~L~PGG~Lvls~~~~d 204 (277)
T 3giw_A 146 ILDAPELRDTLDLTRPVALTVIAIVHF----VLDEDD----AVGIVRRLLEPLPSGSYLAMSIGTAE 204 (277)
T ss_dssp HHTCHHHHTTCCTTSCCEEEEESCGGG----SCGGGC----HHHHHHHHHTTSCTTCEEEEEEECCT
T ss_pred hhcccccccccCcCCcchHHhhhhHhc----CCchhh----HHHHHHHHHHhCCCCcEEEEEeccCC
Confidence 1 00111222111225777764321 112110 13457788899999999999887654
No 248
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.47 E-value=2.1e-07 Score=97.81 Aligned_cols=99 Identities=17% Similarity=0.160 Sum_probs=72.6
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------------CCCCcEEEecCc
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------------PIEGVIQVQGDI 102 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------------~i~gV~~i~gDI 102 (316)
.++.+|||||||+|.++..|+++.+ +..+|+|||+++.+ .+++|+++++|+
T Consensus 720 ~~g~rVLDVGCGTG~lai~LAr~g~------------p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa 787 (950)
T 3htx_A 720 SSASTLVDFGCGSGSLLDSLLDYPT------------SLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSI 787 (950)
T ss_dssp SCCSEEEEETCSSSHHHHHHTSSCC------------CCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCT
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCC------------CCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECch
Confidence 3778999999999999999987642 24699999999831 235689999999
Q ss_pred cChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEc
Q 021161 103 TNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (316)
Q Consensus 103 t~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif 168 (316)
++.+ +..++||+|+|.... +.++.. ....++..+.++|||| .+++.+.
T Consensus 788 ~dLp--------~~d~sFDlVV~~eVL-----eHL~dp----~l~~~L~eI~RvLKPG-~LIISTP 835 (950)
T 3htx_A 788 LEFD--------SRLHDVDIGTCLEVI-----EHMEED----QACEFGEKVLSLFHPK-LLIVSTP 835 (950)
T ss_dssp TSCC--------TTSCSCCEEEEESCG-----GGSCHH----HHHHHHHHHHHTTCCS-EEEEEEC
T ss_pred HhCC--------cccCCeeEEEEeCch-----hhCChH----HHHHHHHHHHHHcCCC-EEEEEec
Confidence 9864 345789999997543 222221 1234678889999999 7766553
No 249
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.45 E-value=6.7e-07 Score=84.71 Aligned_cols=105 Identities=22% Similarity=0.261 Sum_probs=76.6
Q ss_pred hhhHHc-CCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----CCCCcEEEecCccCh
Q 021161 31 QIDEEF-NIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNA 105 (316)
Q Consensus 31 qId~~f-~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----~i~gV~~i~gDIt~~ 105 (316)
.+.+.+ .-+.++.+|||+|||+|.++..++++.+ ..+++++|+..+. ..++|+++.+|+.+
T Consensus 182 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p-------------~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~- 247 (358)
T 1zg3_A 182 LVLQENKRVFEGLESLVDVGGGTGGVTKLIHEIFP-------------HLKCTVFDQPQVVGNLTGNENLNFVGGDMFK- 247 (358)
T ss_dssp HHHHHTHHHHHTCSEEEEETCTTSHHHHHHHHHCT-------------TSEEEEEECHHHHSSCCCCSSEEEEECCTTT-
T ss_pred HHHHhcchhccCCCEEEEECCCcCHHHHHHHHHCC-------------CCeEEEeccHHHHhhcccCCCcEEEeCccCC-
Confidence 444555 1245778999999999999999999873 4689999994431 24679999999986
Q ss_pred hhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccC---CcEEEEEEc
Q 021161 106 RTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKE---GGKFIAKIF 168 (316)
Q Consensus 106 ~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkp---GG~fV~Kif 168 (316)
+ ++ .||+|++... +|++... -+..+|..+.++|+| ||.+++..+
T Consensus 248 ~--------~~--~~D~v~~~~v-----lh~~~d~----~~~~~l~~~~~~L~p~~~gG~l~i~e~ 294 (358)
T 1zg3_A 248 S--------IP--SADAVLLKWV-----LHDWNDE----QSLKILKNSKEAISHKGKDGKVIIIDI 294 (358)
T ss_dssp C--------CC--CCSEEEEESC-----GGGSCHH----HHHHHHHHHHHHTGGGGGGCEEEEEEC
T ss_pred C--------CC--CceEEEEccc-----ccCCCHH----HHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 2 23 4999998643 3444432 124668889999999 999988543
No 250
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.45 E-value=8.2e-08 Score=92.63 Aligned_cols=107 Identities=11% Similarity=-0.011 Sum_probs=70.0
Q ss_pred hhhHHcCCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----CCCCcEEEecCccChh
Q 021161 31 QIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNAR 106 (316)
Q Consensus 31 qId~~f~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----~i~gV~~i~gDIt~~~ 106 (316)
++.+.+. +.++.+|||+|||+|.++..++++. .+|+|+|+++.+ .-.++......+. ..
T Consensus 98 ~l~~~~~-~~~~~~VLDiGcG~G~~~~~l~~~g---------------~~v~gvD~s~~~~~~a~~~~~~~~~~~~~-~~ 160 (416)
T 4e2x_A 98 DFLATEL-TGPDPFIVEIGCNDGIMLRTIQEAG---------------VRHLGFEPSSGVAAKAREKGIRVRTDFFE-KA 160 (416)
T ss_dssp HHHHTTT-CSSSCEEEEETCTTTTTHHHHHHTT---------------CEEEEECCCHHHHHHHHTTTCCEECSCCS-HH
T ss_pred HHHHHhC-CCCCCEEEEecCCCCHHHHHHHHcC---------------CcEEEECCCHHHHHHHHHcCCCcceeeec-hh
Confidence 3444444 3578899999999999999998752 589999999731 1124443332222 12
Q ss_pred hHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEE
Q 021161 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (316)
Q Consensus 107 t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Ki 167 (316)
....+. +..++||+|+|....... .| ...++..+.++|||||.|++.+
T Consensus 161 ~~~~l~--~~~~~fD~I~~~~vl~h~----~d-------~~~~l~~~~r~LkpgG~l~i~~ 208 (416)
T 4e2x_A 161 TADDVR--RTEGPANVIYAANTLCHI----PY-------VQSVLEGVDALLAPDGVFVFED 208 (416)
T ss_dssp HHHHHH--HHHCCEEEEEEESCGGGC----TT-------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred hHhhcc--cCCCCEEEEEECChHHhc----CC-------HHHHHHHHHHHcCCCeEEEEEe
Confidence 221221 234689999998653221 12 2466888999999999999865
No 251
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.44 E-value=3.2e-07 Score=88.03 Aligned_cols=103 Identities=16% Similarity=0.082 Sum_probs=70.5
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CC-CCcEEEecCccChh
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNAR 106 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i-~gV~~i~gDIt~~~ 106 (316)
..++.+|||+|||+|.++..++.... .++|+|+|+++.+ .+ .+++++++|+.+..
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~-------------~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~ 281 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRY-------------SGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLS 281 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTC-------------CSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGG
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCC-------------CCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCC
Confidence 46789999999999999999987642 3589999999842 23 36799999999854
Q ss_pred hHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEE
Q 021161 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (316)
Q Consensus 107 t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Ki 167 (316)
+..++||+|+||.+.. .+.-+......+....+..+.++| ||.+++-+
T Consensus 282 --------~~~~~fD~Ii~npPyg---~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~ 329 (373)
T 3tm4_A 282 --------QYVDSVDFAISNLPYG---LKIGKKSMIPDLYMKFFNELAKVL--EKRGVFIT 329 (373)
T ss_dssp --------GTCSCEEEEEEECCCC---------CCHHHHHHHHHHHHHHHE--EEEEEEEE
T ss_pred --------cccCCcCEEEECCCCC---cccCcchhHHHHHHHHHHHHHHHc--CCeEEEEE
Confidence 3346899999997432 111111112234456677788888 66666544
No 252
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.44 E-value=3.6e-07 Score=88.30 Aligned_cols=92 Identities=13% Similarity=-0.004 Sum_probs=67.8
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC--------------------------CCCC
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------------------------PIEG 94 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~--------------------------~i~g 94 (316)
++.+|||||||+|.++..++++++ ..+|+++|+++.+ .+.+
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~-------------~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~ 113 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETP-------------AEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKT 113 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSS-------------CSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSE
T ss_pred CCCEEEECCCchhHHHHHHHHhCC-------------CCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCc
Confidence 578999999999999999999864 3689999999842 2234
Q ss_pred cEEEecCccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEE
Q 021161 95 VIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (316)
Q Consensus 95 V~~i~gDIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Ki 167 (316)
++++++|+.+.. ... .++||+|+.|. |. + . ...+..+.+.|++||.+++..
T Consensus 114 i~v~~~Da~~~~------~~~-~~~fD~I~lDP-~~-~----~---------~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 114 IVINHDDANRLM------AER-HRYFHFIDLDP-FG-S----P---------MEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp EEEEESCHHHHH------HHS-TTCEEEEEECC-SS-C----C---------HHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEcCcHHHHH------Hhc-cCCCCEEEeCC-CC-C----H---------HHHHHHHHHhcCCCCEEEEEe
Confidence 788899987531 222 35799999996 31 1 1 134567788999999887743
No 253
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.39 E-value=1.8e-07 Score=82.07 Aligned_cols=93 Identities=18% Similarity=0.243 Sum_probs=67.5
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----CCCCcEEEecCccChhhHHHHHhhcC
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNARTAEVVIRHFD 116 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----~i~gV~~i~gDIt~~~t~~~I~~~~~ 116 (316)
++.+|||+|||+|.++..+++ . +++|+++.+ .-.++.++++|+.+.. +.
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~~-----------------~--~~vD~s~~~~~~a~~~~~~~~~~d~~~~~--------~~ 99 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLKI-----------------K--IGVEPSERMAEIARKRGVFVLKGTAENLP--------LK 99 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHTC-----------------C--EEEESCHHHHHHHHHTTCEEEECBTTBCC--------SC
T ss_pred CCCcEEEeCCCCCHHHHHHHH-----------------H--hccCCCHHHHHHHHhcCCEEEEcccccCC--------CC
Confidence 378999999999998876631 1 899998732 1127899999998753 34
Q ss_pred CccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCC
Q 021161 117 GCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK 171 (316)
Q Consensus 117 ~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~ 171 (316)
.++||+|+|...... ... ...++..+.++|+|||.|++..+...
T Consensus 100 ~~~fD~v~~~~~l~~-----~~~------~~~~l~~~~~~L~pgG~l~i~~~~~~ 143 (219)
T 1vlm_A 100 DESFDFALMVTTICF-----VDD------PERALKEAYRILKKGGYLIVGIVDRE 143 (219)
T ss_dssp TTCEEEEEEESCGGG-----SSC------HHHHHHHHHHHEEEEEEEEEEEECSS
T ss_pred CCCeeEEEEcchHhh-----ccC------HHHHHHHHHHHcCCCcEEEEEEeCCc
Confidence 568999999864321 111 13567888999999999999776543
No 254
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.37 E-value=1.9e-07 Score=84.13 Aligned_cols=96 Identities=13% Similarity=0.139 Sum_probs=67.3
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-C--------CCCcEEEecCccChhhHHH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-P--------IEGVIQVQGDITNARTAEV 110 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-~--------i~gV~~i~gDIt~~~t~~~ 110 (316)
.++.+|||+|||+|.++..++++. .+|+|+|+++.+ . .++++++++|+.+..
T Consensus 28 ~~~~~VLDiG~G~G~~~~~l~~~~---------------~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~---- 88 (245)
T 1yub_A 28 KETDTVYEIGTGKGHLTTKLAKIS---------------KQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQ---- 88 (245)
T ss_dssp CSSEEEEECSCCCSSCSHHHHHHS---------------SEEEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTTT----
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhC---------------CeEEEEECCHHHHHHHHHHhccCCceEEEECChhhcC----
Confidence 577899999999999999999873 589999999842 1 246889999998753
Q ss_pred HHhhcC-CccccEEEeCCCCCCCCCCCccHHHHHHHHH------HHH----HHHHHcccCCcEEEE
Q 021161 111 VIRHFD-GCKADLVVCDGAPDVTGLHDMDEFVQSQLIL------AGL----TVVTHVLKEGGKFIA 165 (316)
Q Consensus 111 I~~~~~-~~~~DlVvsDgapdvtG~~~~de~~~~~L~~------aaL----~~a~~vLkpGG~fV~ 165 (316)
+. +++| .|++|.+...+ ..+..+++. ..+ ..+.++|+|||.|++
T Consensus 89 ----~~~~~~f-~vv~n~Py~~~------~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v 143 (245)
T 1yub_A 89 ----FPNKQRY-KIVGNIPYHLS------TQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGL 143 (245)
T ss_dssp ----CCCSSEE-EEEEECCSSSC------HHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHH
T ss_pred ----cccCCCc-EEEEeCCcccc------HHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhh
Confidence 22 3578 88998754322 111112211 123 568899999998765
No 255
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.35 E-value=7.7e-07 Score=85.20 Aligned_cols=90 Identities=13% Similarity=0.271 Sum_probs=64.6
Q ss_pred CCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCCcEEEecCccChhhHHH
Q 021161 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTAEV 110 (316)
Q Consensus 42 ~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~gV~~i~gDIt~~~t~~~ 110 (316)
+.+|||||||+|.++..+++.. .+|+|||+++.+ .+.+++++++|+.+..
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~~---------------~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~---- 274 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARNF---------------DRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFT---- 274 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGGS---------------SEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHH----
T ss_pred CCEEEEccCCCCHHHHHHHhcC---------------CEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHH----
Confidence 5789999999999999888642 589999999842 2567899999987531
Q ss_pred HHhhcCC--------------ccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEcc
Q 021161 111 VIRHFDG--------------CKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (316)
Q Consensus 111 I~~~~~~--------------~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~ 169 (316)
..+.. .+||+|++|.+ ..|+. ..+.++|+++|.+|.-.+.
T Consensus 275 --~~~~~~~~~~~l~~~~~~~~~fD~Vv~dPP--r~g~~---------------~~~~~~l~~~g~ivyvsc~ 328 (369)
T 3bt7_A 275 --QAMNGVREFNRLQGIDLKSYQCETIFVDPP--RSGLD---------------SETEKMVQAYPRILYISCN 328 (369)
T ss_dssp --HHHSSCCCCTTGGGSCGGGCCEEEEEECCC--TTCCC---------------HHHHHHHTTSSEEEEEESC
T ss_pred --HHHhhccccccccccccccCCCCEEEECcC--ccccH---------------HHHHHHHhCCCEEEEEECC
Confidence 11211 37999999963 23432 2345567799999875544
No 256
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.33 E-value=2.1e-06 Score=81.53 Aligned_cols=104 Identities=19% Similarity=0.172 Sum_probs=76.3
Q ss_pred hhhHHcCCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----------CCCCcEEEec
Q 021161 31 QIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQG 100 (316)
Q Consensus 31 qId~~f~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----------~i~gV~~i~g 100 (316)
.+.+.+. +.+..+|||+|||+|.++..++++.+ ..+++..|+..+. ..++|+++.|
T Consensus 170 ~~~~~~~-~~~~~~v~DvGgG~G~~~~~l~~~~p-------------~~~~~~~dlp~v~~~a~~~~~~~~~~rv~~~~g 235 (353)
T 4a6d_A 170 SVLTAFD-LSVFPLMCDLGGGAGALAKECMSLYP-------------GCKITVFDIPEVVWTAKQHFSFQEEEQIDFQEG 235 (353)
T ss_dssp HHHHSSC-GGGCSEEEEETCTTSHHHHHHHHHCS-------------SCEEEEEECHHHHHHHHHHSCC--CCSEEEEES
T ss_pred HHHHhcC-cccCCeEEeeCCCCCHHHHHHHHhCC-------------CceeEeccCHHHHHHHHHhhhhcccCceeeecC
Confidence 4445555 35678999999999999999999874 5788999985431 1357999999
Q ss_pred CccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEE
Q 021161 101 DITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (316)
Q Consensus 101 DIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Ki 167 (316)
|+.+.. + ..+|+|++-. -+|+++... +...|..+.+.|+|||++++--
T Consensus 236 D~~~~~--------~--~~~D~~~~~~-----vlh~~~d~~----~~~iL~~~~~al~pgg~lli~e 283 (353)
T 4a6d_A 236 DFFKDP--------L--PEADLYILAR-----VLHDWADGK----CSHLLERIYHTCKPGGGILVIE 283 (353)
T ss_dssp CTTTSC--------C--CCCSEEEEES-----SGGGSCHHH----HHHHHHHHHHHCCTTCEEEEEE
T ss_pred ccccCC--------C--CCceEEEeee-----ecccCCHHH----HHHHHHHHHhhCCCCCEEEEEE
Confidence 998642 2 3589999753 246665432 3455788899999999998754
No 257
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.33 E-value=1.8e-06 Score=84.55 Aligned_cols=89 Identities=15% Similarity=0.117 Sum_probs=64.8
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCCcEEEecCccChhh
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNART 107 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~gV~~i~gDIt~~~t 107 (316)
+.++.+|||||||+|.++..++++. .+|+|||+++.+ .+. ++++++|+.+..
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~~---------------~~V~gvD~s~~ai~~A~~n~~~ngl~-v~~~~~d~~~~~- 350 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKRG---------------FNVKGFDSNEFAIEMARRNVEINNVD-AEFEVASDREVS- 350 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHTT---------------CEEEEEESCHHHHHHHHHHHHHHTCC-EEEEECCTTTCC-
T ss_pred cCCCCEEEEeeccchHHHHHHHHcC---------------CEEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChHHcC-
Confidence 4678899999999999999998752 589999999842 244 899999998742
Q ss_pred HHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEE
Q 021161 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (316)
Q Consensus 108 ~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Ki 167 (316)
. .+||+|++|.+ ..|.. +. .+ .+...|+|||.+++.+
T Consensus 351 --------~-~~fD~Vv~dPP--r~g~~---~~--------~~-~~l~~l~p~givyvsc 387 (425)
T 2jjq_A 351 --------V-KGFDTVIVDPP--RAGLH---PR--------LV-KRLNREKPGVIVYVSC 387 (425)
T ss_dssp --------C-TTCSEEEECCC--TTCSC---HH--------HH-HHHHHHCCSEEEEEES
T ss_pred --------c-cCCCEEEEcCC--ccchH---HH--------HH-HHHHhcCCCcEEEEEC
Confidence 2 27999999963 33432 11 11 2223489999888854
No 258
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.28 E-value=8.9e-07 Score=82.49 Aligned_cols=64 Identities=14% Similarity=0.158 Sum_probs=48.0
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCCcEEEecCccChhhH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~gV~~i~gDIt~~~t~ 108 (316)
.++.+|||+|||+|.++..++++ ..+|+|||+++.+ .+++++++++|+.+..
T Consensus 41 ~~~~~VLDiG~G~G~lt~~La~~---------------~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~-- 103 (299)
T 2h1r_A 41 KSSDIVLEIGCGTGNLTVKLLPL---------------AKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTV-- 103 (299)
T ss_dssp CTTCEEEEECCTTSTTHHHHTTT---------------SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSC--
T ss_pred CCcCEEEEEcCcCcHHHHHHHhc---------------CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCC--
Confidence 57789999999999999998864 2589999999831 2467899999998743
Q ss_pred HHHHhhcCCccccEEEeCCC
Q 021161 109 EVVIRHFDGCKADLVVCDGA 128 (316)
Q Consensus 109 ~~I~~~~~~~~~DlVvsDga 128 (316)
..+||+|++|.+
T Consensus 104 --------~~~~D~Vv~n~p 115 (299)
T 2h1r_A 104 --------FPKFDVCTANIP 115 (299)
T ss_dssp --------CCCCSEEEEECC
T ss_pred --------cccCCEEEEcCC
Confidence 247999999964
No 259
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.27 E-value=2.3e-06 Score=79.06 Aligned_cols=65 Identities=20% Similarity=0.262 Sum_probs=52.2
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CC-CCcEEEecCccChhh
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i-~gV~~i~gDIt~~~t 107 (316)
.++.+|||+|||+|.++..++++. .+|+|||+++.+ .. ++++++++|+.+..
T Consensus 27 ~~~~~VLDiG~G~G~lt~~L~~~~---------------~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~- 90 (285)
T 1zq9_A 27 RPTDVVLEVGPGTGNMTVKLLEKA---------------KKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTD- 90 (285)
T ss_dssp CTTCEEEEECCTTSTTHHHHHHHS---------------SEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSC-
T ss_pred CCCCEEEEEcCcccHHHHHHHhhC---------------CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceeccc-
Confidence 577899999999999999999873 589999999731 12 46899999998743
Q ss_pred HHHHHhhcCCccccEEEeCCCC
Q 021161 108 AEVVIRHFDGCKADLVVCDGAP 129 (316)
Q Consensus 108 ~~~I~~~~~~~~~DlVvsDgap 129 (316)
+ ..||+|+++.+.
T Consensus 91 -------~--~~fD~vv~nlpy 103 (285)
T 1zq9_A 91 -------L--PFFDTCVANLPY 103 (285)
T ss_dssp -------C--CCCSEEEEECCG
T ss_pred -------c--hhhcEEEEecCc
Confidence 2 379999998754
No 260
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.22 E-value=2.7e-06 Score=83.40 Aligned_cols=119 Identities=14% Similarity=0.099 Sum_probs=71.3
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCC--CcEEEecCccChh
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE--GVIQVQGDITNAR 106 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~--gV~~i~gDIt~~~ 106 (316)
.++.+|+|.|||+|++...+++++............-....|+|+|+++.+ .+. .+.+.+||.....
T Consensus 170 ~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~~ 249 (445)
T 2okc_A 170 QMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEKE 249 (445)
T ss_dssp CTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTSC
T ss_pred CCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCCc
Confidence 457899999999999999998876311000000000012579999999831 222 4677889987642
Q ss_pred hHHHHHhhcCCccccEEEeCCCCCCCCCCCcc----HHH--HHHHHHHHHHHHHHcccCCcEEEEEE
Q 021161 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMD----EFV--QSQLILAGLTVVTHVLKEGGKFIAKI 167 (316)
Q Consensus 107 t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~d----e~~--~~~L~~aaL~~a~~vLkpGG~fV~Ki 167 (316)
...+||+|++|.+.......+.. .+. ........+..+.++|+|||.+++-+
T Consensus 250 ---------~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~ 307 (445)
T 2okc_A 250 ---------PSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVL 307 (445)
T ss_dssp ---------CSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ---------ccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEE
Confidence 12489999999754322111100 000 00011355677889999999998765
No 261
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.21 E-value=4.7e-07 Score=80.08 Aligned_cols=93 Identities=9% Similarity=-0.034 Sum_probs=63.1
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCC-CcEEEecCccChh
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITNAR 106 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~-gV~~i~gDIt~~~ 106 (316)
+.+..+|||||||+|.++..++... +.++|+|+|+++-+ ... ++.+ .|....
T Consensus 47 l~~~~~VLDlGCG~GplAl~l~~~~-------------p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~- 110 (200)
T 3fzg_A 47 IKHVSSILDFGCGFNPLALYQWNEN-------------EKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESD- 110 (200)
T ss_dssp SCCCSEEEEETCTTHHHHHHHHCSS-------------CCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHH-
T ss_pred cCCCCeEEEecCCCCHHHHHHHhcC-------------CCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--eccccc-
Confidence 5678899999999999998887654 35699999999832 122 2333 454321
Q ss_pred hHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEE
Q 021161 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (316)
Q Consensus 107 t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~K 166 (316)
...++||+|++-- .=+.+ +-...++....+.|+|||.||.-
T Consensus 111 --------~~~~~~DvVLa~k---------~LHlL--~~~~~al~~v~~~L~pggvfISf 151 (200)
T 3fzg_A 111 --------VYKGTYDVVFLLK---------MLPVL--KQQDVNILDFLQLFHTQNFVISF 151 (200)
T ss_dssp --------HTTSEEEEEEEET---------CHHHH--HHTTCCHHHHHHTCEEEEEEEEE
T ss_pred --------CCCCCcChhhHhh---------HHHhh--hhhHHHHHHHHHHhCCCCEEEEe
Confidence 3457899999742 11222 11123455788999999999964
No 262
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.20 E-value=4.1e-06 Score=75.58 Aligned_cols=65 Identities=11% Similarity=0.212 Sum_probs=50.4
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCC---------CCCCCcEEEecCccChhhHHH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM---------APIEGVIQVQGDITNARTAEV 110 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~---------~~i~gV~~i~gDIt~~~t~~~ 110 (316)
.++.+|||+|||+|.++..++++. .+|+|||+++. ...++++++++|+.+..
T Consensus 29 ~~~~~VLDiG~G~G~lt~~l~~~~---------------~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~---- 89 (244)
T 1qam_A 29 NEHDNIFEIGSGKGHFTLELVQRC---------------NFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFK---- 89 (244)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS---------------SEEEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGCC----
T ss_pred CCCCEEEEEeCCchHHHHHHHHcC---------------CeEEEEECCHHHHHHHHHhhccCCCeEEEEChHHhCC----
Confidence 567899999999999999999874 58999999973 12367999999998753
Q ss_pred HHhhcC-CccccEEEeCCC
Q 021161 111 VIRHFD-GCKADLVVCDGA 128 (316)
Q Consensus 111 I~~~~~-~~~~DlVvsDga 128 (316)
+. +..+ .|++|.+
T Consensus 90 ----~~~~~~~-~vv~nlP 103 (244)
T 1qam_A 90 ----FPKNQSY-KIFGNIP 103 (244)
T ss_dssp ----CCSSCCC-EEEEECC
T ss_pred ----cccCCCe-EEEEeCC
Confidence 22 2345 6888864
No 263
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.11 E-value=5.5e-06 Score=81.03 Aligned_cols=70 Identities=20% Similarity=0.271 Sum_probs=53.1
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCCcEEEecCccChhhH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~gV~~i~gDIt~~~t~ 108 (316)
.++.+|||||||+|.++..|+++. .+|+|+|+++.+ .+.+++++++|+.+.-.
T Consensus 285 ~~~~~VLDlgcG~G~~~~~la~~~---------------~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~- 348 (433)
T 1uwv_A 285 QPEDRVLDLFCGMGNFTLPLATQA---------------ASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVT- 348 (433)
T ss_dssp CTTCEEEEESCTTTTTHHHHHTTS---------------SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCS-
T ss_pred CCCCEEEECCCCCCHHHHHHHhhC---------------CEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhh-
Confidence 467899999999999999998752 689999999832 25679999999987310
Q ss_pred HHHHhhcCCccccEEEeCCC
Q 021161 109 EVVIRHFDGCKADLVVCDGA 128 (316)
Q Consensus 109 ~~I~~~~~~~~~DlVvsDga 128 (316)
. -.+..++||+|++|.+
T Consensus 349 -~--~~~~~~~fD~Vv~dPP 365 (433)
T 1uwv_A 349 -K--QPWAKNGFDKVLLDPA 365 (433)
T ss_dssp -S--SGGGTTCCSEEEECCC
T ss_pred -h--hhhhcCCCCEEEECCC
Confidence 0 0123457999999953
No 264
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.09 E-value=3.7e-06 Score=78.65 Aligned_cols=67 Identities=12% Similarity=0.153 Sum_probs=54.4
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC---------CCCCcEEEecCccChhhHHH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAEV 110 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~---------~i~gV~~i~gDIt~~~t~~~ 110 (316)
.++.+|||+|||+|.++..|+++. .+|+|||+++.. ..++++++++|+.+..
T Consensus 49 ~~~~~VLEIG~G~G~lT~~La~~~---------------~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~~---- 109 (295)
T 3gru_A 49 TKDDVVLEIGLGKGILTEELAKNA---------------KKVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVD---- 109 (295)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS---------------SEEEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTSC----
T ss_pred CCcCEEEEECCCchHHHHHHHhcC---------------CEEEEEECCHHHHHHHHHHhccCCCeEEEECchhhCC----
Confidence 577899999999999999999873 589999999842 1468999999998753
Q ss_pred HHhhcCCccccEEEeCCCC
Q 021161 111 VIRHFDGCKADLVVCDGAP 129 (316)
Q Consensus 111 I~~~~~~~~~DlVvsDgap 129 (316)
+...+||.|+++.+.
T Consensus 110 ----~~~~~fD~Iv~NlPy 124 (295)
T 3gru_A 110 ----LNKLDFNKVVANLPY 124 (295)
T ss_dssp ----GGGSCCSEEEEECCG
T ss_pred ----cccCCccEEEEeCcc
Confidence 233469999998643
No 265
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.08 E-value=1.2e-05 Score=81.03 Aligned_cols=121 Identities=17% Similarity=0.113 Sum_probs=72.2
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCC-----CCCCEEEEEeCCCCC-----------CCCC-----cEEE
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSRE-----GDLPLIVAIDLQPMA-----------PIEG-----VIQV 98 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~-----~~~~~IvaVDl~~~~-----------~i~g-----V~~i 98 (316)
.++.+|+|.|||+|++...+.+++.......+.... -....|+|+|+++.+ .+.+ +.+.
T Consensus 168 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~ 247 (541)
T 2ar0_A 168 QPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIR 247 (541)
T ss_dssp CTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEE
T ss_pred CCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeE
Confidence 457899999999999999998876421000000000 002479999999831 2333 6678
Q ss_pred ecCccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCC-ccHH--HHHHHHHHHHHHHHHcccCCcEEEEEE
Q 021161 99 QGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHD-MDEF--VQSQLILAGLTVVTHVLKEGGKFIAKI 167 (316)
Q Consensus 99 ~gDIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~-~de~--~~~~L~~aaL~~a~~vLkpGG~fV~Ki 167 (316)
++|...... ....+||+|++|.+.......+ ...+ .........+..+.++|+|||++++-+
T Consensus 248 ~gDtL~~~~-------~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~ 312 (541)
T 2ar0_A 248 LGNTLGSDG-------ENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVV 312 (541)
T ss_dssp ESCTTSHHH-------HTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eCCCccccc-------ccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEe
Confidence 899876431 2346899999997543221100 0000 000111345778889999999998755
No 266
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.04 E-value=6.7e-06 Score=77.04 Aligned_cols=72 Identities=18% Similarity=0.167 Sum_probs=55.4
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC---------CC-CCcEEEecCccChhhHH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PI-EGVIQVQGDITNARTAE 109 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~---------~i-~gV~~i~gDIt~~~t~~ 109 (316)
+++.+|||+|||+|+++..++++++ +++|+|+|+++.+ .. .+++++++|+.+...
T Consensus 25 ~~g~~vLD~g~G~G~~s~~la~~~~-------------~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~-- 89 (301)
T 1m6y_A 25 EDEKIILDCTVGEGGHSRAILEHCP-------------GCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADF-- 89 (301)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCT-------------TCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHH--
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHCC-------------CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHH--
Confidence 5788999999999999999999873 4799999999842 11 579999999887542
Q ss_pred HHHhhcCCccccEEEeCC
Q 021161 110 VVIRHFDGCKADLVVCDG 127 (316)
Q Consensus 110 ~I~~~~~~~~~DlVvsDg 127 (316)
.+...+..+||.|++|.
T Consensus 90 -~l~~~g~~~~D~Vl~D~ 106 (301)
T 1m6y_A 90 -LLKTLGIEKVDGILMDL 106 (301)
T ss_dssp -HHHHTTCSCEEEEEEEC
T ss_pred -HHHhcCCCCCCEEEEcC
Confidence 12222325799999985
No 267
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.00 E-value=1.3e-05 Score=81.09 Aligned_cols=68 Identities=28% Similarity=0.249 Sum_probs=52.0
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCCcEEEecCccChhhH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~gV~~i~gDIt~~~t~ 108 (316)
..+.||||+|||.|.+|..|+++. +.|+|||+++.+ +.-+|++.++|+.+.
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~g---------------a~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~--- 126 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASKG---------------ATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEV--- 126 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHTT---------------CEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHH---
T ss_pred CCCCeEEEECCCCcHHHHHHHhCC---------------CEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHH---
Confidence 456799999999999999999752 699999999841 123478888888653
Q ss_pred HHHHhhcCCccccEEEeCCC
Q 021161 109 EVVIRHFDGCKADLVVCDGA 128 (316)
Q Consensus 109 ~~I~~~~~~~~~DlVvsDga 128 (316)
...+..++||+|+|-..
T Consensus 127 ---~~~~~~~~fD~v~~~e~ 143 (569)
T 4azs_A 127 ---IAALEEGEFDLAIGLSV 143 (569)
T ss_dssp ---HHHCCTTSCSEEEEESC
T ss_pred ---hhhccCCCccEEEECcc
Confidence 23355678999999653
No 268
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=97.90 E-value=9.6e-06 Score=74.43 Aligned_cols=68 Identities=19% Similarity=0.193 Sum_probs=51.8
Q ss_pred CCC--CeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC---------------C----C-CCcEE
Q 021161 40 EGV--KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------------P----I-EGVIQ 97 (316)
Q Consensus 40 ~~~--~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~---------------~----i-~gV~~ 97 (316)
+++ .+|||+|||.|..+..++++. ++|++||+++.. . + .++++
T Consensus 85 ~~g~~~~VLDl~~G~G~dal~lA~~g---------------~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~ 149 (258)
T 2oyr_A 85 KGDYLPDVVDATAGLGRDAFVLASVG---------------CRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQL 149 (258)
T ss_dssp BTTBCCCEEETTCTTCHHHHHHHHHT---------------CCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEE
T ss_pred cCCCCCEEEEcCCcCCHHHHHHHHcC---------------CEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEE
Confidence 456 899999999999999999873 579999999831 1 2 35789
Q ss_pred EecCccChhhHHHHHhhcCCccccEEEeCCCC
Q 021161 98 VQGDITNARTAEVVIRHFDGCKADLVVCDGAP 129 (316)
Q Consensus 98 i~gDIt~~~t~~~I~~~~~~~~~DlVvsDgap 129 (316)
+++|..+. +..+. .+||+|++|.+.
T Consensus 150 ~~~D~~~~------L~~~~-~~fDvV~lDP~y 174 (258)
T 2oyr_A 150 IHASSLTA------LTDIT-PRPQVVYLDPMF 174 (258)
T ss_dssp EESCHHHH------STTCS-SCCSEEEECCCC
T ss_pred EECCHHHH------HHhCc-ccCCEEEEcCCC
Confidence 99998652 22233 369999999754
No 269
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.88 E-value=0.00013 Score=61.59 Aligned_cols=105 Identities=21% Similarity=0.176 Sum_probs=70.3
Q ss_pred hhhHHhhhHHcC--CcCCCCeEEEECCCCC-HHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCCCCCcEEEecCc
Q 021161 26 AFKLLQIDEEFN--IFEGVKRVVDLCAAPG-SWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDI 102 (316)
Q Consensus 26 a~KL~qId~~f~--~~~~~~rVLDLcagPG-~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~i~gV~~i~gDI 102 (316)
++||.+-..+|= -.+++.+|||+|||+| ..+..|++.. +..|+|+|+++.+- + ++++||
T Consensus 18 ~~~m~e~LaeYI~~~~~~~~rVlEVG~G~g~~vA~~La~~~--------------g~~V~atDInp~Av-~---~v~dDi 79 (153)
T 2k4m_A 18 GSHMWNDLAVYIIRCSGPGTRVVEVGAGRFLYVSDYIRKHS--------------KVDLVLTDIKPSHG-G---IVRDDI 79 (153)
T ss_dssp CCHHHHHHHHHHHHHSCSSSEEEEETCTTCCHHHHHHHHHS--------------CCEEEEECSSCSST-T---EECCCS
T ss_pred hhhHHHHHHHHHHhcCCCCCcEEEEccCCChHHHHHHHHhC--------------CCeEEEEECCcccc-c---eEEccC
Confidence 467755444331 1245679999999999 6999998754 36899999999862 2 889999
Q ss_pred cChhhHHHHHhhcCCccccEEEeC-CCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCCC
Q 021161 103 TNARTAEVVIRHFDGCKADLVVCD-GAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKD 172 (316)
Q Consensus 103 t~~~t~~~I~~~~~~~~~DlVvsD-gapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~~ 172 (316)
+++... . -+.||+|.+- ..++ |+...+.+|.++ |..++++.+.++.
T Consensus 80 F~P~~~-----~--Y~~~DLIYsirPP~E--------------l~~~i~~lA~~v---~adliI~pL~~E~ 126 (153)
T 2k4m_A 80 TSPRME-----I--YRGAALIYSIRPPAE--------------IHSSLMRVADAV---GARLIIKPLTGED 126 (153)
T ss_dssp SSCCHH-----H--HTTEEEEEEESCCTT--------------THHHHHHHHHHH---TCEEEEECBTTBC
T ss_pred CCCccc-----c--cCCcCEEEEcCCCHH--------------HHHHHHHHHHHc---CCCEEEEcCCCCc
Confidence 996421 1 1379999653 3221 223445555533 8889998877653
No 270
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=97.87 E-value=7.3e-06 Score=80.04 Aligned_cols=115 Identities=17% Similarity=0.087 Sum_probs=73.8
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-------------CCCCcEEEecCccCh
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-------------PIEGVIQVQGDITNA 105 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-------------~i~gV~~i~gDIt~~ 105 (316)
++++.+|||||||+|..+..+++. ..+|++||+++.+ .+.+++++++|+.+.
T Consensus 91 l~~g~~VLDLgcG~G~~al~LA~~---------------g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~ 155 (410)
T 3ll7_A 91 IREGTKVVDLTGGLGIDFIALMSK---------------ASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEY 155 (410)
T ss_dssp SCTTCEEEESSCSSSHHHHHHHTT---------------CSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGS
T ss_pred cCCCCEEEEeCCCchHHHHHHHhc---------------CCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHh
Confidence 445899999999999999988864 2699999999842 234588999999873
Q ss_pred hhHHHHHhhcCCccccEEEeCCCCCCC-C--CCCccHHHHHHHHHHHHHHHHH-cccCCcEEEEEEccCCCHHHHHHHH
Q 021161 106 RTAEVVIRHFDGCKADLVVCDGAPDVT-G--LHDMDEFVQSQLILAGLTVVTH-VLKEGGKFIAKIFRGKDTSLLYCQL 180 (316)
Q Consensus 106 ~t~~~I~~~~~~~~~DlVvsDgapdvt-G--~~~~de~~~~~L~~aaL~~a~~-vLkpGG~fV~Kif~~~~~~~l~~~l 180 (316)
- . .+...+||+|++|.+--.. | .++++.+. --+..... ++..+..+++|+-.+-+.......+
T Consensus 156 L--~----~~~~~~fDvV~lDPPrr~~~~grv~~led~~------P~l~~~~~~l~~~~~~~~vK~sP~ld~~~~~~~l 222 (410)
T 3ll7_A 156 L--P----LIKTFHPDYIYVDPARRSGADKRVYAIADCE------PDLIPLATELLPFCSSILAKLSPMIDLWDTLQSL 222 (410)
T ss_dssp H--H----HHHHHCCSEEEECCEEC-----CCCCGGGEE------SCHHHHHHHHGGGSSEEEEEECTTSCHHHHHHHC
T ss_pred h--h----hccCCCceEEEECCCCcCCCCceEEehhhcC------CCHHHHHHHHHhhCCcEEEEcCCCCChHHHHhhC
Confidence 1 1 1112579999999743221 1 12222110 01222233 4556778899997777777555444
No 271
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=97.83 E-value=4.1e-06 Score=76.63 Aligned_cols=69 Identities=20% Similarity=0.105 Sum_probs=51.8
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCC-------CC-----------CCCC-cEEEec
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQP-------MA-----------PIEG-VIQVQG 100 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~-------~~-----------~i~g-V~~i~g 100 (316)
.++.+|||+|||+|.++..++++. ++|+|+|+++ .+ .+.+ ++++++
T Consensus 82 ~~~~~VLDlgcG~G~~a~~lA~~g---------------~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~ 146 (258)
T 2r6z_A 82 TAHPTVWDATAGLGRDSFVLASLG---------------LTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFG 146 (258)
T ss_dssp GGCCCEEETTCTTCHHHHHHHHTT---------------CCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEES
T ss_pred CCcCeEEEeeCccCHHHHHHHHhC---------------CEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEEC
Confidence 456899999999999999999852 5899999999 21 1223 899999
Q ss_pred CccChhhHHHHHhhcCC--ccccEEEeCCCC
Q 021161 101 DITNARTAEVVIRHFDG--CKADLVVCDGAP 129 (316)
Q Consensus 101 DIt~~~t~~~I~~~~~~--~~~DlVvsDgap 129 (316)
|+.+.- ..+.. .+||+|++|.+.
T Consensus 147 d~~~~l------~~~~~~~~~fD~V~~dP~~ 171 (258)
T 2r6z_A 147 NAAEQM------PALVKTQGKPDIVYLDPMY 171 (258)
T ss_dssp CHHHHH------HHHHHHHCCCSEEEECCCC
T ss_pred CHHHHH------HhhhccCCCccEEEECCCC
Confidence 987631 11222 579999999753
No 272
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.82 E-value=5.9e-05 Score=79.14 Aligned_cols=110 Identities=15% Similarity=0.036 Sum_probs=69.6
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----------C----CCC---cEEEecCc
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------P----IEG---VIQVQGDI 102 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----------~----i~g---V~~i~gDI 102 (316)
.++.+|+|.|||+|++...++++++. .....|+|+|+++.+ . ..| ..+..+|+
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~e----------i~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~ 389 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNN----------VMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDV 389 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTT----------CCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCG
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcc----------cCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecch
Confidence 45789999999999999999987641 123689999999842 0 122 23344555
Q ss_pred cChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHH---H-----------------HHHHHHHHHHHHcccCCcE
Q 021161 103 TNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQ---S-----------------QLILAGLTVVTHVLKEGGK 162 (316)
Q Consensus 103 t~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~---~-----------------~L~~aaL~~a~~vLkpGG~ 162 (316)
.+.. .....+||+||+|.+... .+..+.... . .+....+..+.++|++||.
T Consensus 390 L~~~-------~~~~~kFDVVIgNPPYg~--~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGr 460 (878)
T 3s1s_A 390 CSLN-------PEDFANVSVVVMNPPYVS--GVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTV 460 (878)
T ss_dssp GGCC-------GGGGTTEEEEEECCBCCS--SCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCE
T ss_pred hccc-------ccccCCCCEEEECCCccc--cccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcE
Confidence 5421 112368999999964321 122221100 0 1234567888999999999
Q ss_pred EEEEEc
Q 021161 163 FIAKIF 168 (316)
Q Consensus 163 fV~Kif 168 (316)
+++-+-
T Consensus 461 LAfIlP 466 (878)
T 3s1s_A 461 ISAIMP 466 (878)
T ss_dssp EEEEEE
T ss_pred EEEEEC
Confidence 998553
No 273
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=97.81 E-value=1.4e-05 Score=73.05 Aligned_cols=68 Identities=10% Similarity=0.079 Sum_probs=51.7
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC---------CCCCcEEEecCccChhhHHH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAEV 110 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~---------~i~gV~~i~gDIt~~~t~~~ 110 (316)
.++.+|||+|||+|.++..|+++. .+|+|||+++.+ ..+++++++||+.+.+..
T Consensus 28 ~~~~~VLEIG~G~G~lt~~La~~~---------------~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~~~~~~~-- 90 (255)
T 3tqs_A 28 QKTDTLVEIGPGRGALTDYLLTEC---------------DNLALVEIDRDLVAFLQKKYNQQKNITIYQNDALQFDFS-- 90 (255)
T ss_dssp CTTCEEEEECCTTTTTHHHHTTTS---------------SEEEEEECCHHHHHHHHHHHTTCTTEEEEESCTTTCCGG--
T ss_pred CCcCEEEEEcccccHHHHHHHHhC---------------CEEEEEECCHHHHHHHHHHHhhCCCcEEEEcchHhCCHH--
Confidence 567899999999999999998753 589999999831 246899999999986421
Q ss_pred HHhhcCCccccEEEeCC
Q 021161 111 VIRHFDGCKADLVVCDG 127 (316)
Q Consensus 111 I~~~~~~~~~DlVvsDg 127 (316)
+.+.+.++| |++|.
T Consensus 91 --~~~~~~~~~-vv~Nl 104 (255)
T 3tqs_A 91 --SVKTDKPLR-VVGNL 104 (255)
T ss_dssp --GSCCSSCEE-EEEEC
T ss_pred --HhccCCCeE-EEecC
Confidence 112245788 88875
No 274
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=97.80 E-value=3.7e-05 Score=70.53 Aligned_cols=104 Identities=19% Similarity=0.236 Sum_probs=71.7
Q ss_pred ccccEEEeCCCCCCCCCCCccHHHHH----HHHHHHHHHHHHcccCCcEEEEEEccCC--CHHHHHHHHHhcCCceEEec
Q 021161 118 CKADLVVCDGAPDVTGLHDMDEFVQS----QLILAGLTVVTHVLKEGGKFIAKIFRGK--DTSLLYCQLKLFFPVVTFAK 191 (316)
Q Consensus 118 ~~~DlVvsDgapdvtG~~~~de~~~~----~L~~aaL~~a~~vLkpGG~fV~Kif~~~--~~~~l~~~l~~~F~~V~~~K 191 (316)
++||+|++|..-..- ..+|.|= ..+...-.-|.++|+|||++++|-+.-. ..+.+...+.+.|..++++|
T Consensus 210 grYDlVfvNv~TpyR----~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aYGyADR~SE~vV~alARkF~~~rv~~ 285 (324)
T 3trk_A 210 GRYDLVVINIHTPFR----IHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAYGYADRTSERVICVLGRKFRSSRALK 285 (324)
T ss_dssp CCEEEEEEECCCCCC----SSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEECCCCSHHHHHHHHHHHTTEEEEEEEC
T ss_pred CceeEEEEecCCccc----cchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEeecccccchHHHHHHHHhhheeeeeec
Confidence 689999999743221 3345441 1112234567899999999999988643 35668888888999999999
Q ss_pred CCCCCCCCcceEEEEecccCCC-CCCCccchhhhhh
Q 021161 192 PKSSRNSSIEAFAVCENYFPPE-GFNPKDLHRLLEK 226 (316)
Q Consensus 192 P~sSR~~S~E~fvVc~gf~~p~-~~~p~~~~~~~~~ 226 (316)
|...- ++.|.|+|-.+|.... .+.+.-++..+..
T Consensus 286 P~cv~-snTEv~~vF~~~Dng~r~~t~h~ln~~ls~ 320 (324)
T 3trk_A 286 PPCVT-SNTEMFFLFSNFDNGRRNFTTHVMNNQLNA 320 (324)
T ss_dssp CTTCC-BTTCEEEEEEEECCCCCCCCSHHHHHHHHH
T ss_pred Ccccc-ccceEEEEEEeccCCccccCHHHhhhhhhh
Confidence 97654 4899999999998732 2334334444433
No 275
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=97.75 E-value=0.00016 Score=69.78 Aligned_cols=80 Identities=11% Similarity=-0.006 Sum_probs=54.3
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCC----CC-----C----------------CCCCCCCEEEEEeCCCCC----
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKL----SP-----D----------------SREGDLPLIVAIDLQPMA---- 90 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~----~~-----~----------------~~~~~~~~IvaVDl~~~~---- 90 (316)
.++.+|||+|||+|.+...++......+.+ ++ . .+.....+|+|+|+++.+
T Consensus 194 ~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~A 273 (385)
T 3ldu_A 194 KAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIA 273 (385)
T ss_dssp CTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHH
Confidence 567899999999999999988764311000 00 0 001123689999999842
Q ss_pred -------CCC-CcEEEecCccChhhHHHHHhhcCCccccEEEeCCC
Q 021161 91 -------PIE-GVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGA 128 (316)
Q Consensus 91 -------~i~-gV~~i~gDIt~~~t~~~I~~~~~~~~~DlVvsDga 128 (316)
.+. .+++.++|+.+.. ...++|+|+||.+
T Consensus 274 r~Na~~~gl~~~i~~~~~D~~~l~---------~~~~~D~Iv~NPP 310 (385)
T 3ldu_A 274 RENAEIAGVDEYIEFNVGDATQFK---------SEDEFGFIITNPP 310 (385)
T ss_dssp HHHHHHHTCGGGEEEEECCGGGCC---------CSCBSCEEEECCC
T ss_pred HHHHHHcCCCCceEEEECChhhcC---------cCCCCcEEEECCC
Confidence 133 5789999998753 2358999999974
No 276
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=97.75 E-value=4.4e-05 Score=70.41 Aligned_cols=91 Identities=18% Similarity=0.023 Sum_probs=62.0
Q ss_pred HHHHhCCchhhhhh---------HHhhhHHcCCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEe
Q 021161 15 KAKEEGWRARSAFK---------LLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAID 85 (316)
Q Consensus 15 ~ak~~g~raRsa~K---------L~qId~~f~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVD 85 (316)
..++.|.++|..|- +..|.+..++ .++ +|||+|||+|.++..|+++. .+|+|||
T Consensus 13 ~~~~~~~~~~k~~GQnfL~d~~i~~~Iv~~~~~-~~~-~VLEIG~G~G~lt~~L~~~~---------------~~V~avE 75 (271)
T 3fut_A 13 LLERHGLFADKRFGQNFLVSEAHLRRIVEAARP-FTG-PVFEVGPGLGALTRALLEAG---------------AEVTAIE 75 (271)
T ss_dssp HHHHTTCCCSTTSSCCEECCHHHHHHHHHHHCC-CCS-CEEEECCTTSHHHHHHHHTT---------------CCEEEEE
T ss_pred HHHhcCCCccccCCccccCCHHHHHHHHHhcCC-CCC-eEEEEeCchHHHHHHHHHcC---------------CEEEEEE
Confidence 45556666554221 2233334443 456 99999999999999999863 5899999
Q ss_pred CCCCC--------CCCCcEEEecCccChhhHHHHHhhcCCccccEEEeCCCC
Q 021161 86 LQPMA--------PIEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAP 129 (316)
Q Consensus 86 l~~~~--------~i~gV~~i~gDIt~~~t~~~I~~~~~~~~~DlVvsDgap 129 (316)
+++.. .-.++++++||+.+.+.. ....+|.|++|...
T Consensus 76 id~~~~~~l~~~~~~~~v~vi~~D~l~~~~~-------~~~~~~~iv~NlPy 120 (271)
T 3fut_A 76 KDLRLRPVLEETLSGLPVRLVFQDALLYPWE-------EVPQGSLLVANLPY 120 (271)
T ss_dssp SCGGGHHHHHHHTTTSSEEEEESCGGGSCGG-------GSCTTEEEEEEECS
T ss_pred CCHHHHHHHHHhcCCCCEEEEECChhhCChh-------hccCccEEEecCcc
Confidence 99842 124799999999875421 11268999999744
No 277
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=97.73 E-value=1.2e-05 Score=82.51 Aligned_cols=96 Identities=24% Similarity=0.202 Sum_probs=65.8
Q ss_pred CCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCC----------C-CCcEEEecCccChhhHHH
Q 021161 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----------I-EGVIQVQGDITNARTAEV 110 (316)
Q Consensus 42 ~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~----------i-~gV~~i~gDIt~~~t~~~ 110 (316)
+..|+|+|||+|-.+....+.... .....+|+||+-++|+. . ..|++++||+++..
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~---------~~~~vkVyAVEknp~A~~a~~~v~~N~~~dkVtVI~gd~eev~---- 424 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQ---------ADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWV---- 424 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHH---------TTCEEEEEEEESCHHHHHHHHHHHHHTTGGGEEEEESCTTTCC----
T ss_pred CcEEEEECCCCcHHHHHHHHHHHh---------cCCCcEEEEEECCHHHHHHHHHHHhccCCCeEEEEeCcceecc----
Confidence 458999999999996655443320 01235899999999852 1 24899999999864
Q ss_pred HHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEE
Q 021161 111 VIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFI 164 (316)
Q Consensus 111 I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV 164 (316)
+ .+++|+|||--. |-.-..|.+ ...|...-+.|||||.++
T Consensus 425 ----L-PEKVDIIVSEwM----G~fLl~E~m-----levL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 425 ----A-PEKADIIVSELL----GSFADNELS-----PECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp ----C-SSCEEEEECCCC----BTTBGGGCH-----HHHHHHHGGGEEEEEEEE
T ss_pred ----C-CcccCEEEEEcC----cccccccCC-----HHHHHHHHHhcCCCcEEc
Confidence 3 379999999742 211122321 244667789999999987
No 278
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=97.72 E-value=7.9e-05 Score=75.15 Aligned_cols=111 Identities=14% Similarity=0.028 Sum_probs=73.3
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CC--CCcEEEecCccChh
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI--EGVIQVQGDITNAR 106 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i--~gV~~i~gDIt~~~ 106 (316)
.++.+|+|.|||+|++...+.+++.. .....|+|+|+++.+ .+ .++.+.+||.....
T Consensus 220 ~~~~~VlDPaCGSG~fLi~a~~~l~~----------~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d 289 (542)
T 3lkd_A 220 KQGFTLYDATMGSGSLLLNAKRYSRQ----------PQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDED 289 (542)
T ss_dssp CTTCEEEETTCTTSTTGGGHHHHCSC----------TTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSC
T ss_pred CCCCEEeecccchhHHHHHHHHHHHh----------ccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceeccc
Confidence 46789999999999999999888741 124689999999842 12 24567889977541
Q ss_pred hHHHHHhhcCCccccEEEeCCCCCCCCCCCccH----------HH----HHHHHHHHHHHHHHccc-CCcEEEEEE
Q 021161 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDE----------FV----QSQLILAGLTVVTHVLK-EGGKFIAKI 167 (316)
Q Consensus 107 t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de----------~~----~~~L~~aaL~~a~~vLk-pGG~fV~Ki 167 (316)
. ......+||+||+|.+... .+..+. +- ....-.+.+..+.+.|+ +||++++-+
T Consensus 290 ~-----p~~~~~~fD~IvaNPPf~~--~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~Vl 358 (542)
T 3lkd_A 290 W-----PTQEPTNFDGVLMNPPYSA--KWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVL 358 (542)
T ss_dssp S-----CCSSCCCBSEEEECCCTTC--CCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEE
T ss_pred c-----cccccccccEEEecCCcCC--ccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEe
Confidence 0 0123468999999975432 221110 10 00111346778889999 999998754
No 279
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=97.69 E-value=0.00022 Score=68.98 Aligned_cols=114 Identities=11% Similarity=-0.057 Sum_probs=67.7
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCC----CCC---------------------CCCCCCCEEEEEeCCCCC----
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKL----SPD---------------------SREGDLPLIVAIDLQPMA---- 90 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~----~~~---------------------~~~~~~~~IvaVDl~~~~---- 90 (316)
+++.+|||+|||+|.+...++........+ ++. .+.....+|+|+|+++.+
T Consensus 200 ~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~A 279 (393)
T 3k0b_A 200 HPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIA 279 (393)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHH
Confidence 467899999999999998887764310000 000 001234679999999842
Q ss_pred -------CCC-CcEEEecCccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcE
Q 021161 91 -------PIE-GVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGK 162 (316)
Q Consensus 91 -------~i~-gV~~i~gDIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~ 162 (316)
.+. .++++++|+.+.. ...+||+|+||.+. |.+..++. ...-+...+...++. -+||.
T Consensus 280 r~Na~~~gl~~~I~~~~~D~~~~~---------~~~~fD~Iv~NPPY---g~rl~~~~-~l~~ly~~lg~~lk~-~~g~~ 345 (393)
T 3k0b_A 280 KQNAVEAGLGDLITFRQLQVADFQ---------TEDEYGVVVANPPY---GERLEDEE-AVRQLYREMGIVYKR-MPTWS 345 (393)
T ss_dssp HHHHHHTTCTTCSEEEECCGGGCC---------CCCCSCEEEECCCC---CCSHHHHH-HHHHHHHHHHHHHHT-CTTCE
T ss_pred HHHHHHcCCCCceEEEECChHhCC---------CCCCCCEEEECCCC---ccccCCch-hHHHHHHHHHHHHhc-CCCCE
Confidence 233 4889999998753 13589999999643 33311111 111123334334444 35888
Q ss_pred EEEEE
Q 021161 163 FIAKI 167 (316)
Q Consensus 163 fV~Ki 167 (316)
+.+-+
T Consensus 346 ~~iit 350 (393)
T 3k0b_A 346 VYVLT 350 (393)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 87743
No 280
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.64 E-value=0.00028 Score=65.90 Aligned_cols=142 Identities=18% Similarity=0.174 Sum_probs=94.6
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----------------CCCCcEEEecCcc
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------------PIEGVIQVQGDIT 103 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----------------~i~gV~~i~gDIt 103 (316)
.+..+||=||.|-|+....+.+.. +..+|+.|||.+.. .-++++.+.+|..
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~-------------~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~ 148 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHK-------------NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGV 148 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCT-------------TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTT
T ss_pred CCCCeEEEECCCchHHHHHHHHcC-------------CcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHH
Confidence 356899999999999888877653 23589999999841 1367999999988
Q ss_pred ChhhHHHHHhhcCCccccEEEeCCCCCCCCCCC-ccHHHHHHHHHHHHHHHHHcccCCcEEEEEEcc----CCCHHHHHH
Q 021161 104 NARTAEVVIRHFDGCKADLVVCDGAPDVTGLHD-MDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR----GKDTSLLYC 178 (316)
Q Consensus 104 ~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~-~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~----~~~~~~l~~ 178 (316)
.. + + -..++||+|+.|.. |..|... +- ....+..+.+.|+|||.||+..-. ......++.
T Consensus 149 ~~-----l-~-~~~~~yDvIi~D~~-dp~~~~~~L~-------t~eFy~~~~~~L~p~Gv~v~q~~sp~~~~~~~~~~~~ 213 (294)
T 3o4f_A 149 NF-----V-N-QTSQTFDVIISDCT-DPIGPGESLF-------TSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHR 213 (294)
T ss_dssp TT-----T-S-CSSCCEEEEEESCC-CCCCTTCCSS-------CCHHHHHHHHTEEEEEEEEEEEEESSSCCHHHHHHHH
T ss_pred HH-----H-h-hccccCCEEEEeCC-CcCCCchhhc-------CHHHHHHHHHHhCCCCEEEEecCCcccChHHHHHHHH
Confidence 63 1 1 13468999999973 3222211 10 123467789999999999986422 223455667
Q ss_pred HHHhcCCceEEecCC-CCCCCCcceEEEEecc
Q 021161 179 QLKLFFPVVTFAKPK-SSRNSSIEAFAVCENY 209 (316)
Q Consensus 179 ~l~~~F~~V~~~KP~-sSR~~S~E~fvVc~gf 209 (316)
.++..|..|..+.-. .+-.+..=.|++|..-
T Consensus 214 ~l~~~F~~v~~~~~~vPty~~g~w~f~~as~~ 245 (294)
T 3o4f_A 214 KLSHYFSDVGFYQAAIPTYYGGIMTFAWATDN 245 (294)
T ss_dssp HHHHHCSEEEEEEECCTTSSSSCEEEEEEESC
T ss_pred HHHhhCCceeeeeeeeccCCCcceeheeEECC
Confidence 788889988776422 2223334467777653
No 281
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.62 E-value=2.1e-05 Score=81.37 Aligned_cols=111 Identities=15% Similarity=0.058 Sum_probs=64.6
Q ss_pred CCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCC----------C-CCcEEEecCccChhhHHH
Q 021161 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----------I-EGVIQVQGDITNARTAEV 110 (316)
Q Consensus 42 ~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~----------i-~gV~~i~gDIt~~~t~~~ 110 (316)
+..|+|+|||+|..+....+........+.....-...+|+|||-++++- . ..|++++||+++...-.
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~- 488 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIA- 488 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHH-
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhccccc-
Confidence 46899999999999864332210000000000000235999999998631 2 34999999999865210
Q ss_pred HHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEE
Q 021161 111 VIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFI 164 (316)
Q Consensus 111 I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV 164 (316)
..-..+++|+|||-.. ...|. .| + ....|..+.+.|||||.++
T Consensus 489 --~~~~~ekVDIIVSElm-Gsfl~---nE-L----~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 489 --KDRGFEQPDIIVSELL-GSFGD---NE-L----SPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp --HHTTCCCCSEEEECCC-BTTBG---GG-S----HHHHHHTTGGGSCTTCEEE
T ss_pred --ccCCCCcccEEEEecc-ccccc---hh-c----cHHHHHHHHHhCCCCcEEE
Confidence 0112478999999753 11111 12 1 2233445578999999877
No 282
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=97.60 E-value=4.6e-05 Score=64.11 Aligned_cols=92 Identities=13% Similarity=0.076 Sum_probs=55.5
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCCCCCcEEEecCccChhhHHHHHhhcCCc
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGC 118 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~i~gV~~i~gDIt~~~t~~~I~~~~~~~ 118 (316)
+++|.+|||||||... .-++..+-.. ++ .. . -.+++++++|+.+... ..+..+
T Consensus 10 ~~~g~~vL~~~~g~v~--vD~s~~ml~~------------a~----~~--~--~~~~~~~~~d~~~~~~-----~~~~~~ 62 (176)
T 2ld4_A 10 ISAGQFVAVVWDKSSP--VEALKGLVDK------------LQ----AL--T--GNEGRVSVENIKQLLQ-----SAHKES 62 (176)
T ss_dssp CCTTSEEEEEECTTSC--HHHHHHHHHH------------HH----HH--T--TTTSEEEEEEGGGGGG-----GCCCSS
T ss_pred CCCCCEEEEecCCcee--eeCCHHHHHH------------HH----Hh--c--ccCcEEEEechhcCcc-----ccCCCC
Confidence 4789999999999754 1122211000 00 00 0 0137888999987541 012567
Q ss_pred cccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEE
Q 021161 119 KADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (316)
Q Consensus 119 ~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Ki 167 (316)
+||+|+|....... ..+. ..++..+.++|||||.|++..
T Consensus 63 ~fD~V~~~~~l~~~---~~~~-------~~~l~~~~r~LkpgG~l~~~~ 101 (176)
T 2ld4_A 63 SFDIILSGLVPGST---TLHS-------AEILAEIARILRPGGCLFLKE 101 (176)
T ss_dssp CEEEEEECCSTTCC---CCCC-------HHHHHHHHHHEEEEEEEEEEE
T ss_pred CEeEEEECChhhhc---ccCH-------HHHHHHHHHHCCCCEEEEEEc
Confidence 89999996543211 0121 356889999999999999853
No 283
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=97.56 E-value=0.00048 Score=66.48 Aligned_cols=114 Identities=11% Similarity=-0.094 Sum_probs=67.4
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCC----CCC---------------------CCCCCCCEEEEEeCCCCC----
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKL----SPD---------------------SREGDLPLIVAIDLQPMA---- 90 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~----~~~---------------------~~~~~~~~IvaVDl~~~~---- 90 (316)
+++..++|.+||+|.+...++........+ ++. .+.....+|+|+|+++.+
T Consensus 193 ~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~A 272 (384)
T 3ldg_A 193 FPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIA 272 (384)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHH
Confidence 567899999999999998887654310000 000 001223679999999842
Q ss_pred -------CCC-CcEEEecCccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcE
Q 021161 91 -------PIE-GVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGK 162 (316)
Q Consensus 91 -------~i~-gV~~i~gDIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~ 162 (316)
.+. .++++++|+++.. . ..++|+|+||.+. ...+. ++....+| ...+-..++. .+||+
T Consensus 273 r~Na~~~gl~~~I~~~~~D~~~l~--------~-~~~fD~Iv~NPPY-G~rl~--~~~~l~~l-y~~lg~~lk~-~~g~~ 338 (384)
T 3ldg_A 273 RKNAREVGLEDVVKLKQMRLQDFK--------T-NKINGVLISNPPY-GERLL--DDKAVDIL-YNEMGETFAP-LKTWS 338 (384)
T ss_dssp HHHHHHTTCTTTEEEEECCGGGCC--------C-CCCSCEEEECCCC-TTTTS--CHHHHHHH-HHHHHHHHTT-CTTSE
T ss_pred HHHHHHcCCCCceEEEECChHHCC--------c-cCCcCEEEECCch-hhccC--CHHHHHHH-HHHHHHHHhh-CCCcE
Confidence 233 3889999998753 1 2489999999743 22222 22112222 2233333333 45888
Q ss_pred EEEEE
Q 021161 163 FIAKI 167 (316)
Q Consensus 163 fV~Ki 167 (316)
+.+-+
T Consensus 339 ~~iit 343 (384)
T 3ldg_A 339 QFILT 343 (384)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 87743
No 284
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.48 E-value=0.00023 Score=65.01 Aligned_cols=119 Identities=17% Similarity=0.173 Sum_probs=72.6
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHh------CCCCCCCCCCCCCCCCEEEEEeCCCCC-----------------------
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKL------YLPAKLSPDSREGDLPLIVAIDLQPMA----------------------- 90 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l------~~~~~~~~~~~~~~~~~IvaVDl~~~~----------------------- 90 (316)
++..+|||+|+|+|--+..+++.. ... ......+|++++..|+.
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~-------~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~ 131 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQ-------AQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQA 131 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTT-------SSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHH
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCC-------CCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHH
Confidence 355799999999999887776643 200 00012589999998831
Q ss_pred C------------C----CCcEEEecCccChhhHHHHHhhcCC---ccccEEEeCCC-CCCCCCCC-ccHHHHHHHHHHH
Q 021161 91 P------------I----EGVIQVQGDITNARTAEVVIRHFDG---CKADLVVCDGA-PDVTGLHD-MDEFVQSQLILAG 149 (316)
Q Consensus 91 ~------------i----~gV~~i~gDIt~~~t~~~I~~~~~~---~~~DlVvsDga-pdvtG~~~-~de~~~~~L~~aa 149 (316)
. . .+++.+.||+.+. +..+.+ ..||+|+.|+. |.. ++. +. ...
T Consensus 132 ~w~~~~~g~~r~~~~~~~~~l~l~~GDa~~~------l~~~~~~~~~~~D~iflD~fsp~~--~p~lw~--------~~~ 195 (257)
T 2qy6_A 132 QWPMPLPGCHRLLLDEGRVTLDLWFGDINEL------ISQLDDSLNQKVDAWFLDGFAPAK--NPDMWT--------QNL 195 (257)
T ss_dssp TCCCSCSEEEEEEEC--CEEEEEEESCHHHH------GGGSCGGGTTCEEEEEECSSCTTT--CGGGCC--------HHH
T ss_pred hccccccchhheeccCCceEEEEEECcHHHH------HhhcccccCCeEEEEEECCCCccc--ChhhcC--------HHH
Confidence 0 1 1355778887652 222322 27999999973 321 111 11 245
Q ss_pred HHHHHHcccCCcEEEEEEccCCCHHHHHHHHHhc-CC
Q 021161 150 LTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLF-FP 185 (316)
Q Consensus 150 L~~a~~vLkpGG~fV~Kif~~~~~~~l~~~l~~~-F~ 185 (316)
+..+.++|+|||+|+. |... ..+...|... |.
T Consensus 196 l~~l~~~L~pGG~l~t--ysaa--~~vrr~L~~aGF~ 228 (257)
T 2qy6_A 196 FNAMARLARPGGTLAT--FTSA--GFVRRGLQEAGFT 228 (257)
T ss_dssp HHHHHHHEEEEEEEEE--SCCB--HHHHHHHHHHTEE
T ss_pred HHHHHHHcCCCcEEEE--EeCC--HHHHHHHHHCCCE
Confidence 7788999999999995 5432 3444445443 64
No 285
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=97.41 E-value=0.00028 Score=70.72 Aligned_cols=108 Identities=19% Similarity=0.246 Sum_probs=77.5
Q ss_pred ccccEEEeCCCCCCCCCCCccHHHHHH----HHHHHHHHHHHcccCCcEEEEEEccCC--CHHHHHHHHHhcCCceEEec
Q 021161 118 CKADLVVCDGAPDVTGLHDMDEFVQSQ----LILAGLTVVTHVLKEGGKFIAKIFRGK--DTSLLYCQLKLFFPVVTFAK 191 (316)
Q Consensus 118 ~~~DlVvsDgapdvtG~~~~de~~~~~----L~~aaL~~a~~vLkpGG~fV~Kif~~~--~~~~l~~~l~~~F~~V~~~K 191 (316)
.+||+|+.|..-... ..+|.|=. .+...-.-|.++|+|||++|++.+.-. ..+.++..+.+.|..++++|
T Consensus 220 ~ryDlvfvn~~t~yr----~HHyqQCeDHa~~l~ml~~~al~~l~pGGt~v~~~YGyADr~sE~vv~alaRkF~~~rv~~ 295 (670)
T 4gua_A 220 ARYDLVFINIGTKYR----NHHFQQCEDHAATLKTLSRSALNCLNPGGTLVVKSYGYADRNSEDVVTALARKFVRVSAAR 295 (670)
T ss_dssp CCEEEEEECCCCCCC----SCHHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCSHHHHHHHHHHHHTEEEEEEEC
T ss_pred CcccEEEEecCCCcc----cchHHHHHHHHHHHHHHhHHHHhhcCCCceEEEEEeeccccchHHHHHHHHhheeeeeeeC
Confidence 589999999743222 34554411 122234667899999999999998643 34667888888999999999
Q ss_pred CCCCCCCCcceEEEEecccC--CCCCCCccchhhhhhcCCC
Q 021161 192 PKSSRNSSIEAFAVCENYFP--PEGFNPKDLHRLLEKVGSP 230 (316)
Q Consensus 192 P~sSR~~S~E~fvVc~gf~~--p~~~~p~~~~~~~~~~~~~ 230 (316)
|..+. ++.|.|++-.+|.. +..+.+.-++..+..++++
T Consensus 296 p~~~~-snTEv~~~f~~~Dn~r~r~~~~~~l~~~l~~iy~g 335 (670)
T 4gua_A 296 PDCVS-SNTEMYLIFRQLDNSRTRQFTPHHLNCVISSVYEG 335 (670)
T ss_dssp CTTCS-BTTCEEEEEEEECCCSSCCCCSHHHHHHHHHHHTT
T ss_pred CCccc-cCceEEEEEEecCCCcccccCHHHhhhHHHHhhhc
Confidence 97654 45899999999987 3556666667777665543
No 286
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.39 E-value=0.0005 Score=60.83 Aligned_cols=106 Identities=16% Similarity=0.164 Sum_probs=65.7
Q ss_pred hhhhhHHhhhHHcCCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCC-----------CCC
Q 021161 24 RSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-----------API 92 (316)
Q Consensus 24 Rsa~KL~qId~~f~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~-----------~~i 92 (316)
+..-++++. .+.+.++||++|| |. |..+..++ .+++|++||..+. +.+
T Consensus 18 ~~~~~~L~~-----~l~~a~~VLEiGt--Gy-STl~lA~~-------------~~g~VvtvE~d~~~~~~ar~~l~~~g~ 76 (202)
T 3cvo_A 18 PAEAEALRM-----AYEEAEVILEYGS--GG-STVVAAEL-------------PGKHVTSVESDRAWARMMKAWLAANPP 76 (202)
T ss_dssp HHHHHHHHH-----HHHHCSEEEEESC--SH-HHHHHHTS-------------TTCEEEEEESCHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHH-----HhhCCCEEEEECc--hH-HHHHHHHc-------------CCCEEEEEeCCHHHHHHHHHHHHHcCC
Confidence 444566654 2356789999998 44 54444333 1479999999983 122
Q ss_pred ---CCcEEEecCccCh------------hhHHHHH----hhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHH
Q 021161 93 ---EGVIQVQGDITNA------------RTAEVVI----RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVV 153 (316)
Q Consensus 93 ---~gV~~i~gDIt~~------------~t~~~I~----~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a 153 (316)
.+|+++.||+... .+...+. ..-..++||+|+.||..- . ..+..+
T Consensus 77 ~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k~-------~---------~~~~~~ 140 (202)
T 3cvo_A 77 AEGTEVNIVWTDIGPTGDWGHPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGRFR-------V---------GCALAT 140 (202)
T ss_dssp CTTCEEEEEECCCSSBCGGGCBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSSSH-------H---------HHHHHH
T ss_pred CCCCceEEEEeCchhhhcccccccchhhhhHHHHhhhhhccccCCCCCEEEEeCCCc-------h---------hHHHHH
Confidence 3578889997542 1122111 111236899999998431 1 123346
Q ss_pred HHcccCCcEEEEE
Q 021161 154 THVLKEGGKFIAK 166 (316)
Q Consensus 154 ~~vLkpGG~fV~K 166 (316)
...|+|||.+++-
T Consensus 141 l~~l~~GG~Iv~D 153 (202)
T 3cvo_A 141 AFSITRPVTLLFD 153 (202)
T ss_dssp HHHCSSCEEEEET
T ss_pred HHhcCCCeEEEEe
Confidence 6899999999763
No 287
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=97.38 E-value=0.00045 Score=71.63 Aligned_cols=117 Identities=10% Similarity=-0.103 Sum_probs=70.3
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCC-----CCCCCC------------------------CCCCCEEEEEeCCCCC
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAK-----LSPDSR------------------------EGDLPLIVAIDLQPMA 90 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~-----~~~~~~------------------------~~~~~~IvaVDl~~~~ 90 (316)
+++.+|||+|||+|.+...++......+. .++... .....+|+|+|+++.+
T Consensus 189 ~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~a 268 (703)
T 3v97_A 189 QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARV 268 (703)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHH
T ss_pred CCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHH
Confidence 46789999999999999888776421000 000000 0123689999999842
Q ss_pred -----------CCCC-cEEEecCccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHccc
Q 021161 91 -----------PIEG-VIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLK 158 (316)
Q Consensus 91 -----------~i~g-V~~i~gDIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLk 158 (316)
.+.+ +++.++|+.+... ....+++|+||||.+. |.+--++. ...-+...+...++.+.
T Consensus 269 v~~A~~N~~~agv~~~i~~~~~D~~~~~~------~~~~~~~d~Iv~NPPY---G~Rlg~~~-~l~~ly~~l~~~lk~~~ 338 (703)
T 3v97_A 269 IQRARTNARLAGIGELITFEVKDVAQLTN------PLPKGPYGTVLSNPPY---GERLDSEP-ALIALHSLLGRIMKNQF 338 (703)
T ss_dssp HHHHHHHHHHTTCGGGEEEEECCGGGCCC------SCTTCCCCEEEECCCC---CC---CCH-HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCCCceEEEECChhhCcc------ccccCCCCEEEeCCCc---cccccchh-HHHHHHHHHHHHHHhhC
Confidence 2333 7889999987421 1112379999999643 32211111 11223445666777778
Q ss_pred CCcEEEEE
Q 021161 159 EGGKFIAK 166 (316)
Q Consensus 159 pGG~fV~K 166 (316)
|||++.+-
T Consensus 339 ~g~~~~il 346 (703)
T 3v97_A 339 GGWNLSLF 346 (703)
T ss_dssp TTCEEEEE
T ss_pred CCCeEEEE
Confidence 99998763
No 288
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.37 E-value=0.00021 Score=72.08 Aligned_cols=116 Identities=15% Similarity=0.111 Sum_probs=66.1
Q ss_pred eEEEECCCCCHHHHHHHHHhCCCC--CCCCCCCCCCCCEEEEEeCCCCC--------CCCCc----EEEecCccChhhHH
Q 021161 44 RVVDLCAAPGSWSQVLSRKLYLPA--KLSPDSREGDLPLIVAIDLQPMA--------PIEGV----IQVQGDITNARTAE 109 (316)
Q Consensus 44 rVLDLcagPG~wSq~La~~l~~~~--~~~~~~~~~~~~~IvaVDl~~~~--------~i~gV----~~i~gDIt~~~t~~ 109 (316)
+|+|.|||+|++...+.+.+.... ......+......|+|+|+++.+ .+.|+ .+.+||.....
T Consensus 247 ~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~--- 323 (544)
T 3khk_A 247 RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDD--- 323 (544)
T ss_dssp EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSC---
T ss_pred eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcCc---
Confidence 999999999999988876542000 00000000003589999999842 12232 22677765432
Q ss_pred HHHhhcCCccccEEEeCCCCCCCCCCCccH--------H-----------HHHHHHHHHHHHHHHcccCCcEEEEEE
Q 021161 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDE--------F-----------VQSQLILAGLTVVTHVLKEGGKFIAKI 167 (316)
Q Consensus 110 ~I~~~~~~~~~DlVvsDgapdvtG~~~~de--------~-----------~~~~L~~aaL~~a~~vLkpGG~fV~Ki 167 (316)
.+...+||+||+|.+..... +..+. + .........+..+.+.|+|||++++-+
T Consensus 324 ----~~~~~~fD~Iv~NPPf~~~~-~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVl 395 (544)
T 3khk_A 324 ----QHPDLRADFVMTNPPFNMKD-WWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLL 395 (544)
T ss_dssp ----SCTTCCEEEEEECCCSSCCS-CCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ----ccccccccEEEECCCcCCcc-ccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEe
Confidence 13346899999997654321 10000 0 000011245777899999999988765
No 289
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=97.37 E-value=0.00017 Score=66.58 Aligned_cols=99 Identities=10% Similarity=-0.018 Sum_probs=65.9
Q ss_pred CcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC--------CC--CCcEEEecCccChhh
Q 021161 38 IFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------PI--EGVIQVQGDITNART 107 (316)
Q Consensus 38 ~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~--------~i--~gV~~i~gDIt~~~t 107 (316)
.+.+..+|||||||.|-++..+.... +..+|+|+|+++-+ .. .+..+...|....
T Consensus 129 ~i~~p~~VLDLGCG~GpLAl~~~~~~-------------p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~-- 193 (281)
T 3lcv_B 129 HLPRPNTLRDLACGLNPLAAPWMGLP-------------AETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLED-- 193 (281)
T ss_dssp GSCCCSEEEETTCTTGGGCCTTTTCC-------------TTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTS--
T ss_pred ccCCCceeeeeccCccHHHHHHHhhC-------------CCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeeccc--
Confidence 34557899999999999987776532 46899999999832 11 2356677787654
Q ss_pred HHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEc
Q 021161 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (316)
Q Consensus 108 ~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif 168 (316)
...+++|+|++.-.. +.+..|---+++ .....|++||.||.---
T Consensus 194 -------~p~~~~DvaL~lkti---------~~Le~q~kg~g~-~ll~aL~~~~vvVSfp~ 237 (281)
T 3lcv_B 194 -------RLDEPADVTLLLKTL---------PCLETQQRGSGW-EVIDIVNSPNIVVTFPT 237 (281)
T ss_dssp -------CCCSCCSEEEETTCH---------HHHHHHSTTHHH-HHHHHSSCSEEEEEEEC
T ss_pred -------CCCCCcchHHHHHHH---------HHhhhhhhHHHH-HHHHHhCCCCEEEeccc
Confidence 245789999986421 111111111334 67889999999996433
No 290
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.33 E-value=0.00071 Score=65.30 Aligned_cols=130 Identities=18% Similarity=0.145 Sum_probs=82.1
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC--------C-----------CCCcEEEecC
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------P-----------IEGVIQVQGD 101 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~--------~-----------i~gV~~i~gD 101 (316)
+..+||=||.|-|+....+.+. + ..+|+.|||.+.. + .++++.+.+|
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh-~-------------~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~D 270 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKL-K-------------PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIED 270 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT-C-------------CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESC
T ss_pred CCCeEEEECCCcHHHHHHHHhc-C-------------CceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHH
Confidence 4689999999999988887753 2 2589999999841 1 1347788888
Q ss_pred ccChhhHHHHHhhcCCccccEEEeCCCC-CCCCCCCccHHHHHHH-HHHHHHHHHHcccCCcEEEEEEccC---CCHHHH
Q 021161 102 ITNARTAEVVIRHFDGCKADLVVCDGAP-DVTGLHDMDEFVQSQL-ILAGLTVVTHVLKEGGKFIAKIFRG---KDTSLL 176 (316)
Q Consensus 102 It~~~t~~~I~~~~~~~~~DlVvsDgap-dvtG~~~~de~~~~~L-~~aaL~~a~~vLkpGG~fV~Kif~~---~~~~~l 176 (316)
.... +++..+ .+++||+|+.|..- ...+.... ....| ....+..+.++|+|||.||+..-.. .....+
T Consensus 271 a~~f--l~~~~~--~~~~yDvIIvDl~D~~~s~~p~g---~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~~~~~~~~~i 343 (381)
T 3c6k_A 271 CIPV--LKRYAK--EGREFDYVINDLTAVPISTSPEE---DSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLY 343 (381)
T ss_dssp HHHH--HHHHHH--HTCCEEEEEEECCSSCCCCC-------CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHHHHH
T ss_pred HHHH--HHhhhh--ccCceeEEEECCCCCcccCcccC---cchHHHHHHHHHHHHHhcCCCCEEEEecCCCcchhHHHHH
Confidence 7642 111111 24689999999631 11111100 01122 2456788899999999999853221 123446
Q ss_pred HHHHHhcCCceEEec
Q 021161 177 YCQLKLFFPVVTFAK 191 (316)
Q Consensus 177 ~~~l~~~F~~V~~~K 191 (316)
...++..|..|.+.+
T Consensus 344 ~~tl~~vF~~v~~~~ 358 (381)
T 3c6k_A 344 EEQLGRLYCPVEFSK 358 (381)
T ss_dssp HHHHTTSSSCEEEEE
T ss_pred HHHHHHhCCcceEee
Confidence 677888888887654
No 291
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.28 E-value=0.00082 Score=62.43 Aligned_cols=70 Identities=16% Similarity=0.200 Sum_probs=55.6
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----CC--CCcEEEecCccChhhHHHHH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----PI--EGVIQVQGDITNARTAEVVI 112 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----~i--~gV~~i~gDIt~~~t~~~I~ 112 (316)
+++..+||.+||.|+.|..++++ . ++|+|+|.++.+ .+ ++++++++|..+... ++
T Consensus 21 ~~gg~~VD~T~G~GGHS~~il~~-~--------------g~VigiD~Dp~Ai~~A~~L~~~rv~lv~~~f~~l~~---~L 82 (285)
T 1wg8_A 21 RPGGVYVDATLGGAGHARGILER-G--------------GRVIGLDQDPEAVARAKGLHLPGLTVVQGNFRHLKR---HL 82 (285)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHT-T--------------CEEEEEESCHHHHHHHHHTCCTTEEEEESCGGGHHH---HH
T ss_pred CCCCEEEEeCCCCcHHHHHHHHC-C--------------CEEEEEeCCHHHHHHHHhhccCCEEEEECCcchHHH---HH
Confidence 67889999999999999999986 2 699999999942 12 579999999987643 33
Q ss_pred hhcCCccccEEEeCC
Q 021161 113 RHFDGCKADLVVCDG 127 (316)
Q Consensus 113 ~~~~~~~~DlVvsDg 127 (316)
...+..++|.|++|.
T Consensus 83 ~~~g~~~vDgIL~DL 97 (285)
T 1wg8_A 83 AALGVERVDGILADL 97 (285)
T ss_dssp HHTTCSCEEEEEEEC
T ss_pred HHcCCCCcCEEEeCC
Confidence 344446899999984
No 292
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=97.22 E-value=0.00026 Score=64.22 Aligned_cols=68 Identities=19% Similarity=0.162 Sum_probs=49.6
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-------CCCCcEEEecCccChhhHHHHH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-------PIEGVIQVQGDITNARTAEVVI 112 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-------~i~gV~~i~gDIt~~~t~~~I~ 112 (316)
.++.+|||+|||+|.++..|+++. ..+|+|||+++.+ ...+++++++|+.+.+..
T Consensus 30 ~~~~~VLDiG~G~G~lt~~L~~~~--------------~~~v~avEid~~~~~~~~~~~~~~v~~i~~D~~~~~~~---- 91 (249)
T 3ftd_A 30 EEGNTVVEVGGGTGNLTKVLLQHP--------------LKKLYVIELDREMVENLKSIGDERLEVINEDASKFPFC---- 91 (249)
T ss_dssp CTTCEEEEEESCHHHHHHHHTTSC--------------CSEEEEECCCHHHHHHHTTSCCTTEEEECSCTTTCCGG----
T ss_pred CCcCEEEEEcCchHHHHHHHHHcC--------------CCeEEEEECCHHHHHHHHhccCCCeEEEEcchhhCChh----
Confidence 467899999999999999998652 3699999999821 234789999999886421
Q ss_pred hhcCCccccEEEeCCC
Q 021161 113 RHFDGCKADLVVCDGA 128 (316)
Q Consensus 113 ~~~~~~~~DlVvsDga 128 (316)
.+. .. ..|++|..
T Consensus 92 -~~~-~~-~~vv~NlP 104 (249)
T 3ftd_A 92 -SLG-KE-LKVVGNLP 104 (249)
T ss_dssp -GSC-SS-EEEEEECC
T ss_pred -Hcc-CC-cEEEEECc
Confidence 111 13 37888864
No 293
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=97.19 E-value=0.00091 Score=61.05 Aligned_cols=92 Identities=11% Similarity=0.020 Sum_probs=61.5
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC--------CC--CCcEEEecCccChhhHH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------PI--EGVIQVQGDITNARTAE 109 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~--------~i--~gV~~i~gDIt~~~t~~ 109 (316)
.+..+|||||||.|-++..+. + ..+++|+|+++-+ .. ..+.+..+|.....
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~---~-------------~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~--- 164 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER---G-------------IASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAP--- 164 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT---T-------------CSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSC---
T ss_pred CCCCeEEEecCCccHHHHHhc---c-------------CCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCC---
Confidence 467899999999999998776 3 4799999999832 11 33567788887643
Q ss_pred HHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEE
Q 021161 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (316)
Q Consensus 110 ~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~K 166 (316)
..+++|+|++.-.. |.++. + ...++....+.|+++|.||.-
T Consensus 165 ------~~~~~DvvLllk~l-----h~LE~----q-~~~~~~~ll~aL~~~~vvVsf 205 (253)
T 3frh_A 165 ------PAEAGDLALIFKLL-----PLLER----E-QAGSAMALLQSLNTPRMAVSF 205 (253)
T ss_dssp ------CCCBCSEEEEESCH-----HHHHH----H-STTHHHHHHHHCBCSEEEEEE
T ss_pred ------CCCCcchHHHHHHH-----HHhhh----h-chhhHHHHHHHhcCCCEEEEc
Confidence 34589999875311 11111 1 112233566799999988863
No 294
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=97.17 E-value=0.00028 Score=65.24 Aligned_cols=73 Identities=14% Similarity=0.023 Sum_probs=51.8
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC------C-CCCcEEEecCccChhhHHHHH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------P-IEGVIQVQGDITNARTAEVVI 112 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~------~-i~gV~~i~gDIt~~~t~~~I~ 112 (316)
.++.+|||+|||+|.++..|+++... .+++|+|||+++.+ . ..+++++++|+.+.+..
T Consensus 41 ~~~~~VLEIG~G~G~lt~~La~~~~~-----------~~~~V~avDid~~~l~~a~~~~~~~v~~i~~D~~~~~~~---- 105 (279)
T 3uzu_A 41 ERGERMVEIGPGLGALTGPVIARLAT-----------PGSPLHAVELDRDLIGRLEQRFGELLELHAGDALTFDFG---- 105 (279)
T ss_dssp CTTCEEEEECCTTSTTHHHHHHHHCB-----------TTBCEEEEECCHHHHHHHHHHHGGGEEEEESCGGGCCGG----
T ss_pred CCcCEEEEEccccHHHHHHHHHhCCC-----------cCCeEEEEECCHHHHHHHHHhcCCCcEEEECChhcCChh----
Confidence 57789999999999999999988630 02569999999832 1 35789999999986521
Q ss_pred hhcCCc--cccEEEeCC
Q 021161 113 RHFDGC--KADLVVCDG 127 (316)
Q Consensus 113 ~~~~~~--~~DlVvsDg 127 (316)
+.+... ..+.||+|.
T Consensus 106 ~~~~~~~~~~~~vv~Nl 122 (279)
T 3uzu_A 106 SIARPGDEPSLRIIGNL 122 (279)
T ss_dssp GGSCSSSSCCEEEEEEC
T ss_pred HhcccccCCceEEEEcc
Confidence 112111 345788775
No 295
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=97.17 E-value=0.00024 Score=64.62 Aligned_cols=72 Identities=11% Similarity=-0.017 Sum_probs=49.7
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC---------CCCCcEEEecCccChhhHHH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAEV 110 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~---------~i~gV~~i~gDIt~~~t~~~ 110 (316)
.++.+|||+|||+|..+. +. +.. ..+|+|||+++.+ ..+++++++||+.+.....
T Consensus 20 ~~~~~VLEIG~G~G~lt~-l~-~~~-------------~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~~~~~~- 83 (252)
T 1qyr_A 20 QKGQAMVEIGPGLAALTE-PV-GER-------------LDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGE- 83 (252)
T ss_dssp CTTCCEEEECCTTTTTHH-HH-HTT-------------CSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGGCCHHH-
T ss_pred CCcCEEEEECCCCcHHHH-hh-hCC-------------CCeEEEEECCHHHHHHHHHHhccCCceEEEECchhhCCHHH-
Confidence 577899999999999999 64 321 2349999999731 1247999999998864321
Q ss_pred HHhhcCCccccEEEeCCCC
Q 021161 111 VIRHFDGCKADLVVCDGAP 129 (316)
Q Consensus 111 I~~~~~~~~~DlVvsDgap 129 (316)
.... . ...|.|+++.+.
T Consensus 84 ~~~~-~-~~~~~vvsNlPY 100 (252)
T 1qyr_A 84 LAEK-M-GQPLRVFGNLPY 100 (252)
T ss_dssp HHHH-H-TSCEEEEEECCT
T ss_pred hhcc-c-CCceEEEECCCC
Confidence 1100 1 246899998754
No 296
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.04 E-value=0.0011 Score=63.19 Aligned_cols=73 Identities=19% Similarity=0.128 Sum_probs=56.6
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----C--CCCcEEEecCccChhhHHHHH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----P--IEGVIQVQGDITNARTAEVVI 112 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----~--i~gV~~i~gDIt~~~t~~~I~ 112 (316)
+++..+||.++|.|+.|..++++++ +.++|+|+|.++.+ . ..++++++++..+.. +++
T Consensus 56 ~pggiyVD~TlG~GGHS~~iL~~lg------------~~GrVig~D~Dp~Al~~A~rL~~~Rv~lv~~nF~~l~---~~L 120 (347)
T 3tka_A 56 RPDGIYIDGTFGRGGHSRLILSQLG------------EEGRLLAIDRDPQAIAVAKTIDDPRFSIIHGPFSALG---EYV 120 (347)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTTCC------------TTCEEEEEESCHHHHHHHTTCCCTTEEEEESCGGGHH---HHH
T ss_pred CCCCEEEEeCcCCCHHHHHHHHhCC------------CCCEEEEEECCHHHHHHHHhhcCCcEEEEeCCHHHHH---HHH
Confidence 6789999999999999999999875 46899999999842 1 246889999988754 233
Q ss_pred hhcCC-ccccEEEeCC
Q 021161 113 RHFDG-CKADLVVCDG 127 (316)
Q Consensus 113 ~~~~~-~~~DlVvsDg 127 (316)
...+- +++|.|+.|.
T Consensus 121 ~~~g~~~~vDgILfDL 136 (347)
T 3tka_A 121 AERDLIGKIDGILLDL 136 (347)
T ss_dssp HHTTCTTCEEEEEEEC
T ss_pred HhcCCCCcccEEEECC
Confidence 33222 3699999994
No 297
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=96.91 E-value=0.0019 Score=64.87 Aligned_cols=86 Identities=12% Similarity=-0.013 Sum_probs=51.0
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCCcEEEecCccChhhH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~gV~~i~gDIt~~~t~ 108 (316)
.++.+|+|-|||+|+|...+.+++..........+.-....+.|+|+.+.. .+....+..+|......
T Consensus 216 ~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~~~I~~~dtL~~~~- 294 (530)
T 3ufb_A 216 QLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEYPRIDPENSLRFPL- 294 (530)
T ss_dssp CTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSCCEEECSCTTCSCG-
T ss_pred CCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCccccccccccccCch-
Confidence 457799999999999998888776421000000000012469999999831 12333556777654321
Q ss_pred HHHHhhcCCccccEEEeCCCC
Q 021161 109 EVVIRHFDGCKADLVVCDGAP 129 (316)
Q Consensus 109 ~~I~~~~~~~~~DlVvsDgap 129 (316)
.......+||+||+|.+.
T Consensus 295 ---~~~~~~~~fD~Il~NPPf 312 (530)
T 3ufb_A 295 ---REMGDKDRVDVILTNPPF 312 (530)
T ss_dssp ---GGCCGGGCBSEEEECCCS
T ss_pred ---hhhcccccceEEEecCCC
Confidence 111223579999999765
No 298
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=96.88 E-value=0.0036 Score=60.11 Aligned_cols=105 Identities=19% Similarity=0.249 Sum_probs=67.2
Q ss_pred CeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC------CCCCcEEEecCccChhhHHHHHh-hc
Q 021161 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIR-HF 115 (316)
Q Consensus 43 ~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~------~i~gV~~i~gDIt~~~t~~~I~~-~~ 115 (316)
.+|+||+||.|+++.-+.+... -.|.|+|+.+.+ ..++..++++||++.... .+.. .+
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~--------------~~v~avE~d~~a~~t~~~N~~~~~~~~~DI~~~~~~-~~~~~~~ 67 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGF--------------DVKMAVEIDQHAINTHAINFPRSLHVQEDVSLLNAE-IIKGFFK 67 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTC--------------EEEEEECSCHHHHHHHHHHCTTSEEECCCGGGCCHH-HHHHHHC
T ss_pred CeEEEEccCcCHHHHHHHHCCC--------------cEEEEEeCCHHHHHHHHHhCCCCceEecChhhcCHH-HHHhhcc
Confidence 5899999999999998876531 256799999854 367788899999987532 2322 22
Q ss_pred CCccccEEEeCCCCCCCCC-----CCccHHHHHHHHHHHHHHHHHcccCCcEEEEEE
Q 021161 116 DGCKADLVVCDGAPDVTGL-----HDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (316)
Q Consensus 116 ~~~~~DlVvsDgapdvtG~-----~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Ki 167 (316)
....+|+|+.+.. |+|. ...+.. ...|....+.++ ..++|. .|++.-
T Consensus 68 ~~~~~D~i~ggpP--CQ~fS~ag~~~~~d~-r~~L~~~~~~~v-~~~~P~-~~v~EN 119 (376)
T 3g7u_A 68 NDMPIDGIIGGPP--CQGFSSIGKGNPDDS-RNQLYMHFYRLV-SELQPL-FFLAEN 119 (376)
T ss_dssp SCCCCCEEEECCC--CCTTC-------CHH-HHHHHHHHHHHH-HHHCCS-EEEEEE
T ss_pred cCCCeeEEEecCC--CCCcccccCCCCCCc-hHHHHHHHHHHH-HHhCCC-EEEEec
Confidence 4468999998643 4433 222222 234555555544 456885 455543
No 299
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=96.82 E-value=0.0085 Score=57.64 Aligned_cols=123 Identities=14% Similarity=0.038 Sum_probs=67.6
Q ss_pred CCeEEEECCCCCHHHHHHHHHhCCCC--CCCCCCCCCCCCEEEEEeCCCCC------CCC-----------------CcE
Q 021161 42 VKRVVDLCAAPGSWSQVLSRKLYLPA--KLSPDSREGDLPLIVAIDLQPMA------PIE-----------------GVI 96 (316)
Q Consensus 42 ~~rVLDLcagPG~wSq~La~~l~~~~--~~~~~~~~~~~~~IvaVDl~~~~------~i~-----------------gV~ 96 (316)
..+|+|||||+|..|..+...+-... .........+...|+..||-... .++ +-.
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 58999999999999988743321000 00000011245788898977642 011 112
Q ss_pred EEecCccChhhHHHHHhhcCCccccEEEeCCCCCCCC-----CC-------Ccc-------------HH-HHHH-HHHHH
Q 021161 97 QVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTG-----LH-------DMD-------------EF-VQSQ-LILAG 149 (316)
Q Consensus 97 ~i~gDIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG-----~~-------~~d-------------e~-~~~~-L~~aa 149 (316)
++.|.-.+.- ...|+.+++|+|+|..+...-. +. |.+ .| .|.+ =....
T Consensus 133 f~~gvpgSFy-----~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~f 207 (374)
T 3b5i_A 133 FVAGVPGSFY-----RRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEF 207 (374)
T ss_dssp EEEEEESCTT-----SCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhh-----cccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHH
Confidence 3333222211 1236678999999997643211 10 000 11 1111 12456
Q ss_pred HHHHHHcccCCcEEEEEEcc
Q 021161 150 LTVVTHVLKEGGKFIAKIFR 169 (316)
Q Consensus 150 L~~a~~vLkpGG~fV~Kif~ 169 (316)
|....+.|+|||.||+.+..
T Consensus 208 L~~ra~eL~pGG~mvl~~~g 227 (374)
T 3b5i_A 208 LRARAAEVKRGGAMFLVCLG 227 (374)
T ss_dssp HHHHHHHEEEEEEEEEEEEE
T ss_pred HHHHHHHhCCCCEEEEEEec
Confidence 88889999999999997764
No 300
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=96.82 E-value=0.0034 Score=58.13 Aligned_cols=100 Identities=15% Similarity=0.012 Sum_probs=68.6
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC------------------------------
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------------------------------ 90 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~------------------------------ 90 (316)
...+||++|++.|.-+..+++.+... ..++.+|+++|.....
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~--------g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~a 177 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAH--------DVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEV 177 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHT--------TCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHH
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhc--------CCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHH
Confidence 35699999999999998888766310 0125789999965311
Q ss_pred -------CC--CCcEEEecCccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCc
Q 021161 91 -------PI--EGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGG 161 (316)
Q Consensus 91 -------~i--~gV~~i~gDIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG 161 (316)
.+ .+|++++||+.+ |+ ..+..+++|+|..|+. .|. -....|..+...|+|||
T Consensus 178 r~n~~~~gl~~~~I~li~Gda~e--tL----~~~~~~~~d~vfIDaD----------~y~---~~~~~Le~~~p~L~pGG 238 (282)
T 2wk1_A 178 RRNFRNYDLLDEQVRFLPGWFKD--TL----PTAPIDTLAVLRMDGD----------LYE---STWDTLTNLYPKVSVGG 238 (282)
T ss_dssp HHHHHHTTCCSTTEEEEESCHHH--HS----TTCCCCCEEEEEECCC----------SHH---HHHHHHHHHGGGEEEEE
T ss_pred HHHHHHcCCCcCceEEEEeCHHH--HH----hhCCCCCEEEEEEcCC----------ccc---cHHHHHHHHHhhcCCCE
Confidence 12 568899999854 22 2344568999999972 111 12456788999999999
Q ss_pred EEEEEE
Q 021161 162 KFIAKI 167 (316)
Q Consensus 162 ~fV~Ki 167 (316)
.+|+=-
T Consensus 239 iIv~DD 244 (282)
T 2wk1_A 239 YVIVDD 244 (282)
T ss_dssp EEEESS
T ss_pred EEEEcC
Confidence 888743
No 301
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=96.70 E-value=0.0086 Score=57.82 Aligned_cols=123 Identities=16% Similarity=0.063 Sum_probs=68.5
Q ss_pred CCeEEEECCCCCHHHHHHHHHh----CCCCCCCCCCCCCCCCEEEEEeCCCCC--------C------------CCCcEE
Q 021161 42 VKRVVDLCAAPGSWSQVLSRKL----YLPAKLSPDSREGDLPLIVAIDLQPMA--------P------------IEGVIQ 97 (316)
Q Consensus 42 ~~rVLDLcagPG~wSq~La~~l----~~~~~~~~~~~~~~~~~IvaVDl~~~~--------~------------i~gV~~ 97 (316)
..+|+||||++|..|..+...+ ...-.........+...|+..||-... + ..+..+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 5799999999999999876652 110000000011244678888877421 0 013455
Q ss_pred EecCccChhhHHHHHhhcCCccccEEEeCCCCCCC-----CCCC-------c---------cHHH----HHHH---HHHH
Q 021161 98 VQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVT-----GLHD-------M---------DEFV----QSQL---ILAG 149 (316)
Q Consensus 98 i~gDIt~~~t~~~I~~~~~~~~~DlVvsDgapdvt-----G~~~-------~---------de~~----~~~L---~~aa 149 (316)
+.|...+-- -..|+.+++|+|+|..+..+. ++.+ . .+.+ +.|. ....
T Consensus 133 ~~gvpgSFy-----~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~F 207 (384)
T 2efj_A 133 IGAMPGSFY-----SRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTF 207 (384)
T ss_dssp EEECCSCTT-----SCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhh-----hccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 666544421 123667899999999764321 1111 0 0101 1111 1344
Q ss_pred HHHHHHcccCCcEEEEEEcc
Q 021161 150 LTVVTHVLKEGGKFIAKIFR 169 (316)
Q Consensus 150 L~~a~~vLkpGG~fV~Kif~ 169 (316)
|..-.+.|+|||.||+.+..
T Consensus 208 L~~Ra~eL~pGG~mvl~~~g 227 (384)
T 2efj_A 208 LRIHSEELISRGRMLLTFIC 227 (384)
T ss_dssp HHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHhccCCeEEEEEec
Confidence 77788999999999997654
No 302
>3iyl_W VP1; non-enveloped virus, membrane penetration protein, autocleav myristol group, icosahedral virus; HET: MYR; 3.30A {Grass carp reovirus} PDB: 3k1q_A
Probab=95.70 E-value=0.038 Score=59.45 Aligned_cols=175 Identities=19% Similarity=0.175 Sum_probs=106.2
Q ss_pred HHHHHHhCCch---hhhhhHHhhhH-Hc---------CCcCCCCeEEEECCCCCHHH----HHHHHHhCCCCCCCCCCCC
Q 021161 13 YRKAKEEGWRA---RSAFKLLQIDE-EF---------NIFEGVKRVVDLCAAPGSWS----QVLSRKLYLPAKLSPDSRE 75 (316)
Q Consensus 13 yr~ak~~g~ra---Rsa~KL~qId~-~f---------~~~~~~~rVLDLcagPG~wS----q~La~~l~~~~~~~~~~~~ 75 (316)
+|+++-..||. ||.+|=..... .+ .+++.|+.+.=|||.-+.=+ .++.....
T Consensus 471 ~~R~~Fs~~R~~~DRSllKD~a~l~f~ss~~dp~~~~~~l~~g~SmaYlGAS~tH~~~deP~II~~~~~----------- 539 (1299)
T 3iyl_W 471 ARRDLFRRLRAPADRSAIKDRAVFDFLASLVNPTTANPVLDTSFSMAYLGASSAHANADEPVILADIRS----------- 539 (1299)
T ss_dssp HHHHHHHHTBCC--CHHHHHHHHHHHHTTSCBCSSSSCBSCTTCCEEEECCC------CCCHHHHHHHH-----------
T ss_pred HHHHHHHHhhcccchhhhhhhHHHhhHHhhcCCcCCCccccCCceEEEecccCCCCCCCCCeehhHHhc-----------
Confidence 55666667775 88888543322 12 24577899999998655321 23333221
Q ss_pred CCCCEEEEEeCCCCCCCC------CcEEEecCccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHH
Q 021161 76 GDLPLIVAIDLQPMAPIE------GVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAG 149 (316)
Q Consensus 76 ~~~~~IvaVDl~~~~~i~------gV~~i~gDIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aa 149 (316)
++|=|| +.+ |..+.+|-|.+.. ..+..+.|.+|.||--=-..|--|++ ...++..+.
T Consensus 540 ---G~ipGV------p~Ps~I~QfGyDVt~G~I~D~~------~p~pTGtf~fVYSDVDQV~d~~~Dl~--As~r~~~~~ 602 (1299)
T 3iyl_W 540 ---GSIPGL------PIPRRIVQFGYDVVHGSLLDLS------RAVPTGTFGLVYADLDQVEDAGTDMP--AANRAAIAM 602 (1299)
T ss_dssp ---TCSTTS------CCCSCEEEESSSCSSSCCCCTT------SCCCCCCEEEEEECCCCC-----CCH--HHHHHHHHH
T ss_pred ---CCCCCC------CCCceeeeeeeeeccceEEeee------ccCCCCceEEEEecchhhccCCcchh--hhhHHHHHH
Confidence 121111 111 2233345444432 13667899999999522222222333 456677788
Q ss_pred HHHHHHcccCCcEEEEEE-ccCCC-HHHHHHHHHhcCCceEEecCCCCCCCCcceEEEEecccCCCCCCC
Q 021161 150 LTVVTHVLKEGGKFIAKI-FRGKD-TSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVCENYFPPEGFNP 217 (316)
Q Consensus 150 L~~a~~vLkpGG~fV~Ki-f~~~~-~~~l~~~l~~~F~~V~~~KP~sSR~~S~E~fvVc~gf~~p~~~~p 217 (316)
+..++.+..+||.+|+|+ |.... -..++.++..+|..+++.||--. .|.|.|+|..+-..-..+.|
T Consensus 603 l~~~l~~ts~GG~~v~KiNFPT~~vw~~if~~~~~~~~~~~i~KPli~--NnvEvf~v~~~r~~~~~l~~ 670 (1299)
T 3iyl_W 603 LGTALQMTTAGGVSVLKVNFPTRAFWTQVFNLYATHATTLHLVKPTIV--NSSEVFLVFGGRQSNGALRS 670 (1299)
T ss_dssp HHHHHHHEEEEEEEEEEESCCCTTHHHHHHHHTTTTCSCEEEEECCSS--SCCCEEEEESCCCTTCCCCC
T ss_pred HHHHHHhhcCCceEEEEEcCCchHHHHHHHHHhcchhheeeeecceee--cceEEEEEEeeecccCCCCC
Confidence 999999999999999998 44333 24566777778999999999864 46899999877775555555
No 303
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=95.57 E-value=0.021 Score=54.42 Aligned_cols=105 Identities=17% Similarity=0.172 Sum_probs=62.1
Q ss_pred cCCCCeEEEECCCC-CHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----CCCCcEEEecCccChhh-HHHHH
Q 021161 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNART-AEVVI 112 (316)
Q Consensus 39 ~~~~~rVLDLcagP-G~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----~i~gV~~i~gDIt~~~t-~~~I~ 112 (316)
++++.+||-+|||+ |.....+++.++ ..+|+++|.++.. .--|...+ |..+... .+.+.
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlak~~G-------------a~~Vi~~~~~~~~~~~a~~lGa~~i--~~~~~~~~~~~~~ 247 (398)
T 2dph_A 183 VKPGSHVYIAGAGPVGRCAAAGARLLG-------------AACVIVGDQNPERLKLLSDAGFETI--DLRNSAPLRDQID 247 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHT-------------CSEEEEEESCHHHHHHHHTTTCEEE--ETTSSSCHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-------------CCEEEEEcCCHHHHHHHHHcCCcEE--cCCCcchHHHHHH
Confidence 46889999999877 666666777664 1389999987632 11255433 3333332 34455
Q ss_pred hhcCCccccEEEeCCCCCCCCCCCc----cHHHHHHHHHHHHHHHHHcccCCcEEEE
Q 021161 113 RHFDGCKADLVVCDGAPDVTGLHDM----DEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (316)
Q Consensus 113 ~~~~~~~~DlVvsDgapdvtG~~~~----de~~~~~L~~aaL~~a~~vLkpGG~fV~ 165 (316)
+...+..+|+|+- ++|.... +++- .-....+..++++|++||++++
T Consensus 248 ~~~~g~g~Dvvid-----~~g~~~~~~~~~~~~--~~~~~~~~~~~~~l~~gG~iv~ 297 (398)
T 2dph_A 248 QILGKPEVDCGVD-----AVGFEAHGLGDEANT--ETPNGALNSLFDVVRAGGAIGI 297 (398)
T ss_dssp HHHSSSCEEEEEE-----CSCTTCBCSGGGTTS--BCTTHHHHHHHHHEEEEEEEEC
T ss_pred HHhCCCCCCEEEE-----CCCCccccccccccc--cccHHHHHHHHHHHhcCCEEEE
Confidence 5455557999984 3333210 0000 0000235678899999999985
No 304
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=95.53 E-value=0.022 Score=52.68 Aligned_cols=96 Identities=17% Similarity=0.261 Sum_probs=60.2
Q ss_pred CeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCC------CCCcEEEecCccChhhHHHHHhhcC
Q 021161 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP------IEGVIQVQGDITNARTAEVVIRHFD 116 (316)
Q Consensus 43 ~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~------i~gV~~i~gDIt~~~t~~~I~~~~~ 116 (316)
++||||.||.||++.-+.+... -.|.|+|+.+.+- .+ -..+.+||++... +.+
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~--------------~~v~a~e~d~~a~~ty~~N~~-~~~~~~DI~~i~~-----~~~- 59 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGF--------------RIICANEYDKSIWKTYESNHS-AKLIKGDISKISS-----DEF- 59 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTC--------------EEEEEEECCTTTHHHHHHHCC-SEEEESCGGGCCG-----GGS-
T ss_pred CeEEEeCcCccHHHHHHHHCCC--------------EEEEEEeCCHHHHHHHHHHCC-CCcccCChhhCCH-----hhC-
Confidence 5899999999999988865321 2466999999752 33 3678899998642 123
Q ss_pred CccccEEEeCCCCCCCCC------CCc-cHHHHHHHHHHHHHHHHHcccCCcEEEEE
Q 021161 117 GCKADLVVCDGAPDVTGL------HDM-DEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (316)
Q Consensus 117 ~~~~DlVvsDgapdvtG~------~~~-de~~~~~L~~aaL~~a~~vLkpGG~fV~K 166 (316)
..+|+|+. .|.|++. ... |+ ...|....+.+ ...++|. .|++.
T Consensus 60 -~~~D~l~g--gpPCQ~fS~ag~~~g~~d~--R~~L~~~~~r~-i~~~~Pk-~~~~E 109 (331)
T 3ubt_Y 60 -PKCDGIIG--GPPSQSWSEGGSLRGIDDP--RGKLFYEYIRI-LKQKKPI-FFLAE 109 (331)
T ss_dssp -CCCSEEEC--CCCGGGTEETTEECCTTCG--GGHHHHHHHHH-HHHHCCS-EEEEE
T ss_pred -CcccEEEe--cCCCCCcCCCCCccCCCCc--hhHHHHHHHHH-HhccCCe-EEEee
Confidence 36999884 3445443 111 22 23455555544 4567886 45554
No 305
>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}
Probab=95.47 E-value=0.31 Score=42.64 Aligned_cols=113 Identities=12% Similarity=0.164 Sum_probs=72.3
Q ss_pred CCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCCCCCcEEEecCccChhhHHHHHhhcCCcccc
Q 021161 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKAD 121 (316)
Q Consensus 42 ~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~i~gV~~i~gDIt~~~t~~~I~~~~~~~~~D 121 (316)
+++||=-|++ |++-..+++++.. ..+..|+.+|..+......+.++++|+++....+.+.+.+....+|
T Consensus 4 ~k~vlITGas-~gIG~~~a~~l~~----------~~g~~v~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~id 72 (244)
T 4e4y_A 4 MANYLVTGGS-KGIGKAVVELLLQ----------NKNHTVINIDIQQSFSAENLKFIKADLTKQQDITNVLDIIKNVSFD 72 (244)
T ss_dssp CEEEEEETTT-SHHHHHHHHHHTT----------STTEEEEEEESSCCCCCTTEEEEECCTTCHHHHHHHHHHTTTCCEE
T ss_pred CCeEEEeCCC-ChHHHHHHHHHHh----------cCCcEEEEeccccccccccceEEecCcCCHHHHHHHHHHHHhCCCC
Confidence 4566666654 7788888888752 1346888999887655677899999999998877777665556899
Q ss_pred EEEeCCCCCCC-CCCCccH--H---HHHHHH--HHHHHHHHHcccCCcEEEE
Q 021161 122 LVVCDGAPDVT-GLHDMDE--F---VQSQLI--LAGLTVVTHVLKEGGKFIA 165 (316)
Q Consensus 122 lVvsDgapdvt-G~~~~de--~---~~~~L~--~aaL~~a~~vLkpGG~fV~ 165 (316)
+||.+.+.... ...+.+. + +...+. ...++.+...++.+|++|.
T Consensus 73 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~ 124 (244)
T 4e4y_A 73 GIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVF 124 (244)
T ss_dssp EEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEE
T ss_pred EEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEE
Confidence 99999753221 2222222 1 111111 2223444556667788776
No 306
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=95.39 E-value=0.024 Score=54.18 Aligned_cols=120 Identities=15% Similarity=0.088 Sum_probs=69.8
Q ss_pred CCCCeEEEECCCCCHHHHHHHHH--------hCCCCCCCCCCCCCCCCEEEEEeCCCCC------CCC------CcEEEe
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRK--------LYLPAKLSPDSREGDLPLIVAIDLQPMA------PIE------GVIQVQ 99 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~--------l~~~~~~~~~~~~~~~~~IvaVDl~~~~------~i~------gV~~i~ 99 (316)
....+|+||||++|..|..+... .... +. +..+...|+..||-... .++ +..++.
T Consensus 50 ~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~----~~-~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~ 124 (359)
T 1m6e_X 50 TTRLAIADLGCSSGPNALFAVTELIKTVEELRKKM----GR-ENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFIN 124 (359)
T ss_dssp SSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSS----SC-SSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEE
T ss_pred CCceEEEecCCCCCcchHHHHHHHHHHHHHHHHhc----CC-CCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEE
Confidence 34578999999999877654322 1100 00 02245689999987742 233 345555
Q ss_pred cCccChhhHHHHHhhcCCccccEEEeCCCCCCC-----CCCC---------------ccHH-HHHH-HHHHHHHHHHHcc
Q 021161 100 GDITNARTAEVVIRHFDGCKADLVVCDGAPDVT-----GLHD---------------MDEF-VQSQ-LILAGLTVVTHVL 157 (316)
Q Consensus 100 gDIt~~~t~~~I~~~~~~~~~DlVvsDgapdvt-----G~~~---------------~de~-~~~~-L~~aaL~~a~~vL 157 (316)
|...+-- -..|+.+++|+|+|..+.... ++.+ ...| .|.+ =....|..-.+.|
T Consensus 125 gvpgSFy-----~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL 199 (359)
T 1m6e_X 125 GVPGSFY-----GRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEV 199 (359)
T ss_dssp EEESCSS-----SCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHB
T ss_pred ecchhhh-----hccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5444321 123677899999999763221 1111 0111 1222 1244578888999
Q ss_pred cCCcEEEEEEcc
Q 021161 158 KEGGKFIAKIFR 169 (316)
Q Consensus 158 kpGG~fV~Kif~ 169 (316)
+|||.||+.+..
T Consensus 200 ~pGG~mvl~~~g 211 (359)
T 1m6e_X 200 VPGGRMVLTILG 211 (359)
T ss_dssp CTTCEEEEEEEE
T ss_pred cCCceEEEEEec
Confidence 999999997653
No 307
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=95.36 E-value=0.043 Score=52.30 Aligned_cols=58 Identities=14% Similarity=0.043 Sum_probs=45.9
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCC--------CCCCCcEEEecCccChhhHHHH
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM--------APIEGVIQVQGDITNARTAEVV 111 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~--------~~i~gV~~i~gDIt~~~t~~~I 111 (316)
++..|||+|.|+|.+|+.|+++.. ..+|++|++.+- ...++++.+++|+.+..+...+
T Consensus 58 ~~~~VlEIGPG~G~LT~~Ll~~~~-------------~~~vvavE~D~~l~~~L~~~~~~~~l~ii~~D~l~~~~~~~l 123 (353)
T 1i4w_A 58 EELKVLDLYPGVGIQSAIFYNKYC-------------PRQYSLLEKRSSLYKFLNAKFEGSPLQILKRDPYDWSTYSNL 123 (353)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHC-------------CSEEEEECCCHHHHHHHHHHTTTSSCEEECSCTTCHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHhhCC-------------CCEEEEEecCHHHHHHHHHhccCCCEEEEECCccchhhHHHh
Confidence 368999999999999999998753 358999999872 1246899999999887644443
No 308
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=95.21 E-value=0.0091 Score=56.44 Aligned_cols=69 Identities=16% Similarity=0.201 Sum_probs=49.2
Q ss_pred CeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC------CCCCcEEEecCccChhhHHHHHhhcC
Q 021161 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIRHFD 116 (316)
Q Consensus 43 ~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~------~i~gV~~i~gDIt~~~t~~~I~~~~~ 116 (316)
.+|+||+||.|+++.-+.+... .--.|+++|+.+.+ ..++..++.+||++.... .+.
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~------------~~~~v~~~E~d~~a~~~~~~N~~~~~~~~~Di~~~~~~-~~~---- 65 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCI------------PAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLE-EFD---- 65 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTC------------SEEEEEEECCCHHHHHHHHHHCTTSCEECSCGGGCCHH-HHH----
T ss_pred CeEEEeCcCccHHHHHHHHCCC------------CceEEEEEeCCHHHHHHHHHhccccccccCCHHHccHh-HcC----
Confidence 5899999999999998877531 01268999999853 245666789999986421 121
Q ss_pred CccccEEEeCCC
Q 021161 117 GCKADLVVCDGA 128 (316)
Q Consensus 117 ~~~~DlVvsDga 128 (316)
...+|+|+.+.+
T Consensus 66 ~~~~D~l~~gpP 77 (343)
T 1g55_A 66 RLSFDMILMSPP 77 (343)
T ss_dssp HHCCSEEEECCC
T ss_pred cCCcCEEEEcCC
Confidence 126999998754
No 309
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=95.05 E-value=0.012 Score=55.52 Aligned_cols=68 Identities=13% Similarity=0.240 Sum_probs=48.0
Q ss_pred CeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC------CCCCcEEEecCccChhhHHHHHhhcC
Q 021161 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIRHFD 116 (316)
Q Consensus 43 ~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~------~i~gV~~i~gDIt~~~t~~~I~~~~~ 116 (316)
.+|+||+||.||++.-+.+... ..-.|.|+|+.+.+ ..++...+.+||++... ..+.
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~------------~~~~v~a~e~d~~a~~ty~~N~~~~~~~~~DI~~~~~-~~~~---- 66 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGL------------DGEIVAAVDINTVANSVYKHNFPETNLLNRNIQQLTP-QVIK---- 66 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTC------------SEEEEEEECCCHHHHHHHHHHCTTSCEECCCGGGCCH-HHHH----
T ss_pred CEEEEECcCccHHHHHHHHcCC------------CceEEEEEeCCHHHHHHHHHhCCCCceeccccccCCH-HHhc----
Confidence 4899999999999998876531 01247799999864 35666678999998653 2222
Q ss_pred CccccEEEeCC
Q 021161 117 GCKADLVVCDG 127 (316)
Q Consensus 117 ~~~~DlVvsDg 127 (316)
...+|+|+...
T Consensus 67 ~~~~D~l~ggp 77 (333)
T 4h0n_A 67 KWNVDTILMSP 77 (333)
T ss_dssp HTTCCEEEECC
T ss_pred cCCCCEEEecC
Confidence 13699999753
No 310
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=95.00 E-value=0.11 Score=48.49 Aligned_cols=97 Identities=18% Similarity=0.231 Sum_probs=61.1
Q ss_pred cCCCCeEEEECCCC-CHHHHHHHHHhCCCCCCCCCCCCCCCCE-EEEEeCCCCC-----CC-CCcEEEecCcc-ChhhHH
Q 021161 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPL-IVAIDLQPMA-----PI-EGVIQVQGDIT-NARTAE 109 (316)
Q Consensus 39 ~~~~~rVLDLcagP-G~wSq~La~~l~~~~~~~~~~~~~~~~~-IvaVDl~~~~-----~i-~gV~~i~gDIt-~~~t~~ 109 (316)
+++|.+||=+|+|+ |.....+++.++ ++ |+++|.++.. .+ +.+.....|-. .....+
T Consensus 177 ~~~g~~VlV~GaG~vG~~aiqlak~~G--------------a~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~ 242 (363)
T 3m6i_A 177 VRLGDPVLICGAGPIGLITMLCAKAAG--------------ACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAK 242 (363)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHTT--------------CCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC--------------CCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHH
Confidence 46888999999755 444445565553 44 9999987631 12 22323332322 234455
Q ss_pred HHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEE
Q 021161 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (316)
Q Consensus 110 ~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~K 166 (316)
.+.+...+..+|+|+- +.|. ...+..+.++|++||+++.-
T Consensus 243 ~v~~~t~g~g~Dvvid-----~~g~------------~~~~~~~~~~l~~~G~iv~~ 282 (363)
T 3m6i_A 243 KIVESFGGIEPAVALE-----CTGV------------ESSIAAAIWAVKFGGKVFVI 282 (363)
T ss_dssp HHHHHTSSCCCSEEEE-----CSCC------------HHHHHHHHHHSCTTCEEEEC
T ss_pred HHHHHhCCCCCCEEEE-----CCCC------------hHHHHHHHHHhcCCCEEEEE
Confidence 6666666778999994 3332 12466788999999999973
No 311
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=94.88 E-value=0.039 Score=50.67 Aligned_cols=69 Identities=17% Similarity=0.160 Sum_probs=42.9
Q ss_pred CCcEEEecCccChhhHHHHHhhcCCccccEEEeCCCCCCCCCC-C----c---cHHH-HHHHHHHHHHHHHHcccCCcEE
Q 021161 93 EGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLH-D----M---DEFV-QSQLILAGLTVVTHVLKEGGKF 163 (316)
Q Consensus 93 ~gV~~i~gDIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~-~----~---de~~-~~~L~~aaL~~a~~vLkpGG~f 163 (316)
..+.+++||.++ ++..+.+++||+|++|.+....... . . ..+. -...+...+..+.++|||||.|
T Consensus 20 ~~~~i~~gD~~~------~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l 93 (297)
T 2zig_A 20 GVHRLHVGDARE------VLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRL 93 (297)
T ss_dssp -CEEEEESCHHH------HHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEE
T ss_pred cCCEEEECcHHH------HHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEE
Confidence 457889999876 2344666899999999753211100 0 0 0111 1122345678899999999999
Q ss_pred EEEE
Q 021161 164 IAKI 167 (316)
Q Consensus 164 V~Ki 167 (316)
++-+
T Consensus 94 ~i~~ 97 (297)
T 2zig_A 94 VIVV 97 (297)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8865
No 312
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=94.87 E-value=0.036 Score=52.16 Aligned_cols=94 Identities=16% Similarity=0.133 Sum_probs=59.0
Q ss_pred cCCCCeEEEECCCC-CHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----CCCCcE-EEecCccChhhHHHHH
Q 021161 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVI-QVQGDITNARTAEVVI 112 (316)
Q Consensus 39 ~~~~~rVLDLcagP-G~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----~i~gV~-~i~gDIt~~~t~~~I~ 112 (316)
++++.+||-+|||+ |.....+++.++ ..+|+++|.++.. .--|.. .+ |..+....+.+.
T Consensus 188 ~~~g~~VlV~GaG~vG~~a~qlak~~G-------------a~~Vi~~~~~~~~~~~a~~lGa~~vi--~~~~~~~~~~~~ 252 (371)
T 1f8f_A 188 VTPASSFVTWGAGAVGLSALLAAKVCG-------------ASIIIAVDIVESRLELAKQLGATHVI--NSKTQDPVAAIK 252 (371)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHHT-------------CSEEEEEESCHHHHHHHHHHTCSEEE--ETTTSCHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-------------CCeEEEECCCHHHHHHHHHcCCCEEe--cCCccCHHHHHH
Confidence 46789999999876 556666666664 1279999987632 011322 22 222333344555
Q ss_pred hhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEE
Q 021161 113 RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (316)
Q Consensus 113 ~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~ 165 (316)
+...+ .+|+|+- ++|. ...+..+.++|++||+++.
T Consensus 253 ~~~~g-g~D~vid-----~~g~------------~~~~~~~~~~l~~~G~iv~ 287 (371)
T 1f8f_A 253 EITDG-GVNFALE-----STGS------------PEILKQGVDALGILGKIAV 287 (371)
T ss_dssp HHTTS-CEEEEEE-----CSCC------------HHHHHHHHHTEEEEEEEEE
T ss_pred HhcCC-CCcEEEE-----CCCC------------HHHHHHHHHHHhcCCEEEE
Confidence 54444 8999984 3332 1346778899999999987
No 313
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=94.76 E-value=0.049 Score=50.84 Aligned_cols=70 Identities=17% Similarity=0.175 Sum_probs=45.7
Q ss_pred CCcEEEecCccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCcc---HHHHHHHHHHHHHHHHHcccCCcEEEEEEc
Q 021161 93 EGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMD---EFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (316)
Q Consensus 93 ~gV~~i~gDIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~d---e~~~~~L~~aaL~~a~~vLkpGG~fV~Kif 168 (316)
..+.+++||..+ ++..++.+++|+|++|.+.......+.+ ...-...+...+..+.++|+|||.+++-+-
T Consensus 13 ~~~~ii~gD~~~------~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~ 85 (323)
T 1boo_A 13 SNGSMYIGDSLE------LLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFG 85 (323)
T ss_dssp SSEEEEESCHHH------HGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCceEEeCcHHH------HHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEEC
Confidence 356788999765 2345667899999999754332111111 111123456778888999999999998654
No 314
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=94.71 E-value=0.066 Score=50.10 Aligned_cols=93 Identities=19% Similarity=0.272 Sum_probs=58.1
Q ss_pred cCCCCeEEEECCCC-CHHHHHHHHHhCCCCCCCCCCCCCCCC-EEEEEeCCCCC----CCCCcE-EEecCcc---ChhhH
Q 021161 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLP-LIVAIDLQPMA----PIEGVI-QVQGDIT---NARTA 108 (316)
Q Consensus 39 ~~~~~rVLDLcagP-G~wSq~La~~l~~~~~~~~~~~~~~~~-~IvaVDl~~~~----~i~gV~-~i~gDIt---~~~t~ 108 (316)
++++.+||-+|+|+ |.....+++.++ . +|+++|.++.. .--|.. .+ |.. .....
T Consensus 169 ~~~g~~VlV~GaG~vG~~aiqlak~~G--------------a~~Vi~~~~~~~~~~~a~~lGa~~vi--~~~~~~~~~~~ 232 (356)
T 1pl8_A 169 VTLGHKVLVCGAGPIGMVTLLVAKAMG--------------AAQVVVTDLSATRLSKAKEIGADLVL--QISKESPQEIA 232 (356)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT--------------CSEEEEEESCHHHHHHHHHTTCSEEE--ECSSCCHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC--------------CCEEEEECCCHHHHHHHHHhCCCEEE--cCcccccchHH
Confidence 46889999999765 555555666553 4 89999987632 112332 22 222 23344
Q ss_pred HHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEE
Q 021161 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (316)
Q Consensus 109 ~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~ 165 (316)
+.+.+... ..+|+|+- ++|. ...+..+.++|++||+++.
T Consensus 233 ~~i~~~~~-~g~D~vid-----~~g~------------~~~~~~~~~~l~~~G~iv~ 271 (356)
T 1pl8_A 233 RKVEGQLG-CKPEVTIE-----CTGA------------EASIQAGIYATRSGGTLVL 271 (356)
T ss_dssp HHHHHHHT-SCCSEEEE-----CSCC------------HHHHHHHHHHSCTTCEEEE
T ss_pred HHHHHHhC-CCCCEEEE-----CCCC------------hHHHHHHHHHhcCCCEEEE
Confidence 45555444 57999994 3332 1235677899999999987
No 315
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=94.68 E-value=0.062 Score=45.61 Aligned_cols=96 Identities=20% Similarity=0.168 Sum_probs=58.3
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----CCCCcEEEecCccChhhHHHHHhh
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNARTAEVVIRH 114 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----~i~gV~~i~gDIt~~~t~~~I~~~ 114 (316)
++++++||-.|++ |+..+.+++.+.. .+.+|+++|.++.. .-.|... ..|.++....+.+.+.
T Consensus 36 ~~~g~~vlV~Ga~-ggiG~~~~~~~~~-----------~G~~V~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~~~~~ 102 (198)
T 1pqw_A 36 LSPGERVLIHSAT-GGVGMAAVSIAKM-----------IGARIYTTAGSDAKREMLSRLGVEY-VGDSRSVDFADEILEL 102 (198)
T ss_dssp CCTTCEEEETTTT-SHHHHHHHHHHHH-----------HTCEEEEEESSHHHHHHHHTTCCSE-EEETTCSTHHHHHHHH
T ss_pred CCCCCEEEEeeCC-ChHHHHHHHHHHH-----------cCCEEEEEeCCHHHHHHHHHcCCCE-EeeCCcHHHHHHHHHH
Confidence 4688999999853 3444444333210 13689999987631 0123322 1255555555556655
Q ss_pred cCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEE
Q 021161 115 FDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (316)
Q Consensus 115 ~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~ 165 (316)
..+..+|+|+... |. ..+..+.++|++||++|.
T Consensus 103 ~~~~~~D~vi~~~-----g~-------------~~~~~~~~~l~~~G~~v~ 135 (198)
T 1pqw_A 103 TDGYGVDVVLNSL-----AG-------------EAIQRGVQILAPGGRFIE 135 (198)
T ss_dssp TTTCCEEEEEECC-----CT-------------HHHHHHHHTEEEEEEEEE
T ss_pred hCCCCCeEEEECC-----ch-------------HHHHHHHHHhccCCEEEE
Confidence 5555799999653 21 124567899999999987
No 316
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=94.59 E-value=0.53 Score=42.78 Aligned_cols=78 Identities=14% Similarity=0.091 Sum_probs=50.5
Q ss_pred CCcEEEecCccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCCC
Q 021161 93 EGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKD 172 (316)
Q Consensus 93 ~gV~~i~gDIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~~ 172 (316)
.+|+++.|++. +|+..++...++.++|+|..|+ | .|.. ....++.+...|+|||.+|+--+....
T Consensus 158 ~~i~li~G~~~--dTL~~~l~~~~~~~~dlv~ID~--D--------~Y~~---t~~~le~~~p~l~~GGvIv~DD~~~~~ 222 (257)
T 3tos_A 158 QRSVLVEGDVR--ETVPRYLAENPQTVIALAYFDL--D--------LYEP---TKAVLEAIRPYLTKGSIVAFDELDNPK 222 (257)
T ss_dssp CSEEEEESCHH--HHHHHHHHHCTTCCEEEEEECC--C--------CHHH---HHHHHHHHGGGEEEEEEEEESSTTCTT
T ss_pred CcEEEEEecHH--HHHHHHHHhCCCCceEEEEEcC--c--------ccch---HHHHHHHHHHHhCCCcEEEEcCCCCCC
Confidence 45788899885 4666655555566899999997 2 1211 245677888999999999986553222
Q ss_pred HHHHHHHHHhcCC
Q 021161 173 TSLLYCQLKLFFP 185 (316)
Q Consensus 173 ~~~l~~~l~~~F~ 185 (316)
..-....+..++.
T Consensus 223 w~G~~~A~~ef~~ 235 (257)
T 3tos_A 223 WPGENIAMRKVLG 235 (257)
T ss_dssp CTHHHHHHHHHTC
T ss_pred ChHHHHHHHHHHh
Confidence 2234455566653
No 317
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=94.57 E-value=0.15 Score=43.24 Aligned_cols=100 Identities=18% Similarity=0.189 Sum_probs=69.3
Q ss_pred CeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCC----CCCcEEEecCccChhhHHHHHhhcCCc
Q 021161 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITNARTAEVVIRHFDGC 118 (316)
Q Consensus 43 ~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~----i~gV~~i~gDIt~~~t~~~I~~~~~~~ 118 (316)
.-|+|||-|.|--=.+|.+.++ +-.|+++|..--.. .+--.+++|||.+ |+......| +.
T Consensus 42 GpVlElGLGNGRTydHLRe~~P-------------~R~I~vfDR~~~~hp~~~P~~e~~ilGdi~~--tL~~~~~r~-g~ 105 (174)
T 3iht_A 42 GPVYELGLGNGRTYHHLRQHVQ-------------GREIYVFERAVASHPDSTPPEAQLILGDIRE--TLPATLERF-GA 105 (174)
T ss_dssp SCEEEECCTTCHHHHHHHHHCC-------------SSCEEEEESSCCCCGGGCCCGGGEEESCHHH--HHHHHHHHH-CS
T ss_pred CceEEecCCCChhHHHHHHhCC-------------CCcEEEEEeeeccCCCCCCchHheecccHHH--HHHHHHHhc-CC
Confidence 4799999999999999999884 57899999876431 2234689999976 555555556 57
Q ss_pred cccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEE
Q 021161 119 KADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (316)
Q Consensus 119 ~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~ 165 (316)
++-|+.+|.. +|..+.|..... ..--.+..+|.|||.+|.
T Consensus 106 ~a~LaHaD~G---~g~~~~d~a~a~----~lsplI~~~la~GGi~vS 145 (174)
T 3iht_A 106 TASLVHADLG---GHNREKNDRFAR----LISPLIEPHLAQGGLMVS 145 (174)
T ss_dssp CEEEEEECCC---CSCHHHHHHHHH----HHHHHHGGGEEEEEEEEE
T ss_pred ceEEEEeecC---CCCcchhHHHHH----hhhHHHHHHhcCCcEEEe
Confidence 8999999962 344333322111 112345679999998886
No 318
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=94.50 E-value=0.063 Score=50.10 Aligned_cols=94 Identities=15% Similarity=0.201 Sum_probs=57.0
Q ss_pred cCCCCeEEEECCCC-CHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----CCCCcE-EEecCccC-hhhHHHH
Q 021161 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVI-QVQGDITN-ARTAEVV 111 (316)
Q Consensus 39 ~~~~~rVLDLcagP-G~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----~i~gV~-~i~gDIt~-~~t~~~I 111 (316)
++++.+||-.|+|+ |.+...+++.++ .+|+++|.++.. .--|.. .+ |..+ .+..+++
T Consensus 166 ~~~g~~VlV~GaG~vG~~a~qla~~~G--------------a~Vi~~~~~~~~~~~~~~lGa~~~~--~~~~~~~~~~~i 229 (352)
T 1e3j_A 166 VQLGTTVLVIGAGPIGLVSVLAAKAYG--------------AFVVCTARSPRRLEVAKNCGADVTL--VVDPAKEEESSI 229 (352)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESCHHHHHHHHHTTCSEEE--ECCTTTSCHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC--------------CEEEEEcCCHHHHHHHHHhCCCEEE--cCcccccHHHHH
Confidence 46889999999754 444444555543 579999987632 111332 22 2222 3334455
Q ss_pred HhhcC---CccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEE
Q 021161 112 IRHFD---GCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (316)
Q Consensus 112 ~~~~~---~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~ 165 (316)
.+... +..+|+|+-. +|. ...+..+.++|++||+++.
T Consensus 230 ~~~~~~~~g~g~D~vid~-----~g~------------~~~~~~~~~~l~~~G~iv~ 269 (352)
T 1e3j_A 230 IERIRSAIGDLPNVTIDC-----SGN------------EKCITIGINITRTGGTLML 269 (352)
T ss_dssp HHHHHHHSSSCCSEEEEC-----SCC------------HHHHHHHHHHSCTTCEEEE
T ss_pred HHHhccccCCCCCEEEEC-----CCC------------HHHHHHHHHHHhcCCEEEE
Confidence 55443 4579999953 332 1235677899999999987
No 319
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=94.48 E-value=0.055 Score=50.21 Aligned_cols=148 Identities=15% Similarity=0.051 Sum_probs=83.6
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCE-EEEEeCCCCC------CCCCcEEEecCccChhhHHHHH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPL-IVAIDLQPMA------PIEGVIQVQGDITNARTAEVVI 112 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~-IvaVDl~~~~------~i~gV~~i~gDIt~~~t~~~I~ 112 (316)
+...+|+||+||.||++..+.+... ... |.++|+.+.+ ..++...+.+||++.... .+.
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~aG~-------------~~~~v~a~E~d~~a~~ty~~N~~~~~~~~~DI~~i~~~-~i~ 79 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDLGI-------------QVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVTQK-HIQ 79 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHTTB-------------CEEEEEEECCCHHHHHHHHHHTTTCEEEECCGGGCCHH-HHH
T ss_pred CCCCEEEEeCcCccHHHHHHHHCCC-------------ccceEEEEECCHHHHHHHHHhCCCCceeCCChHHccHH-Hhc
Confidence 3567999999999999988876421 233 6899999853 356667889999987532 232
Q ss_pred hhcCCccccEEEeCCCC---CCCC-CC-CccHHHHHHHHHHHHHHHHHcccCC-c-----EEEEEEccCCC---HHHHHH
Q 021161 113 RHFDGCKADLVVCDGAP---DVTG-LH-DMDEFVQSQLILAGLTVVTHVLKEG-G-----KFIAKIFRGKD---TSLLYC 178 (316)
Q Consensus 113 ~~~~~~~~DlVvsDgap---dvtG-~~-~~de~~~~~L~~aaL~~a~~vLkpG-G-----~fV~Kif~~~~---~~~l~~ 178 (316)
+ + ..+|+|+....+ ...| .+ ..+.. ...|....+.+ ...++|. | .|++.-..+-. -..+..
T Consensus 80 ~-~--~~~Dll~ggpPCQ~fS~ag~~r~g~~d~-r~~L~~~~~ri-i~~~~P~~~~~~P~~~l~ENV~gl~~~~~~~~~~ 154 (295)
T 2qrv_A 80 E-W--GPFDLVIGGSPCNDLSIVNPARKGLYEG-TGRLFFEFYRL-LHDARPKEGDDRPFFWLFENVVAMGVSDKRDISR 154 (295)
T ss_dssp H-T--CCCSEEEECCCCGGGBTTCTTCCTTTST-TTTHHHHHHHH-HHHHSCCTTCCCCCEEEEEEESSBCHHHHHHHHH
T ss_pred c-c--CCcCEEEecCCCccccccCccccccccc-cchhHHHHHHH-HHHhCcccccCCccEEEEEcCcchhhcCccHHHH
Confidence 2 1 469999976432 1222 11 11111 12454554444 3456776 3 67766444421 123444
Q ss_pred HHHhcCCceEEecCCCCCCCCcceEEEEeccc
Q 021161 179 QLKLFFPVVTFAKPKSSRNSSIEAFAVCENYF 210 (316)
Q Consensus 179 ~l~~~F~~V~~~KP~sSR~~S~E~fvVc~gf~ 210 (316)
.|+..+. |.-.+-. . +.+.+++++ -.+.
T Consensus 155 ~l~~~~~-vl~a~~~-~-PQ~R~R~~i-~~~~ 182 (295)
T 2qrv_A 155 FLESNPV-MIDAKEV-S-AAHRARYFW-GNLP 182 (295)
T ss_dssp HHTSCCC-CEEGGGT-S-SBCCEEEEE-ECCT
T ss_pred HHhcCcE-EeecceE-C-CccCcEEEE-EEec
Confidence 4543232 2222333 2 667788877 3443
No 320
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=94.44 E-value=0.12 Score=45.15 Aligned_cols=77 Identities=14% Similarity=0.138 Sum_probs=53.4
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCCCCCcEEEecCccChhhHHHHHh----hcC
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIR----HFD 116 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~i~gV~~i~gDIt~~~t~~~I~~----~~~ 116 (316)
.+++||=.| |.|+.-..+++++.. .+.+|+.+|.++......+..+++|+++...++.+.+ .+.
T Consensus 6 ~~k~vlVTG-as~gIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~ 73 (241)
T 1dhr_A 6 EARRVLVYG-GRGALGSRCVQAFRA-----------RNWWVASIDVVENEEASASVIVKMTDSFTEQADQVTAEVGKLLG 73 (241)
T ss_dssp CCCEEEEET-TTSHHHHHHHHHHHT-----------TTCEEEEEESSCCTTSSEEEECCCCSCHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHh-----------CCCEEEEEeCChhhccCCcEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 456777777 557788888888742 3578999998875433346678899999876555443 332
Q ss_pred CccccEEEeCCCC
Q 021161 117 GCKADLVVCDGAP 129 (316)
Q Consensus 117 ~~~~DlVvsDgap 129 (316)
.+.+|+||.+.+.
T Consensus 74 ~g~iD~lv~~Ag~ 86 (241)
T 1dhr_A 74 DQKVDAILCVAGG 86 (241)
T ss_dssp TCCEEEEEECCCC
T ss_pred CCCCCEEEEcccc
Confidence 2479999998753
No 321
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=94.37 E-value=0.063 Score=49.88 Aligned_cols=94 Identities=16% Similarity=0.149 Sum_probs=61.0
Q ss_pred cCCCCeEEEECCCC-CHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----CCCCcE-EEecCccChhhHHHHH
Q 021161 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVI-QVQGDITNARTAEVVI 112 (316)
Q Consensus 39 ~~~~~rVLDLcagP-G~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----~i~gV~-~i~gDIt~~~t~~~I~ 112 (316)
++++.+||=+|+|+ |.....+++..+ ..+|+++|.++.. .--|.. .+.. .+ ...+.+.
T Consensus 169 ~~~g~~vlv~GaG~vG~~a~qla~~~g-------------~~~Vi~~~~~~~~~~~~~~lGa~~~i~~--~~-~~~~~v~ 232 (345)
T 3jv7_A 169 LGPGSTAVVIGVGGLGHVGIQILRAVS-------------AARVIAVDLDDDRLALAREVGADAAVKS--GA-GAADAIR 232 (345)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHC-------------CCEEEEEESCHHHHHHHHHTTCSEEEEC--ST-THHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-------------CCEEEEEcCCHHHHHHHHHcCCCEEEcC--CC-cHHHHHH
Confidence 57899999999865 555555666653 3699999988732 111322 2221 12 3445566
Q ss_pred hhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEE
Q 021161 113 RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (316)
Q Consensus 113 ~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~ 165 (316)
+...+..+|+|+- ++|. ...+..+.++|++||+++.
T Consensus 233 ~~t~g~g~d~v~d-----~~G~------------~~~~~~~~~~l~~~G~iv~ 268 (345)
T 3jv7_A 233 ELTGGQGATAVFD-----FVGA------------QSTIDTAQQVVAVDGHISV 268 (345)
T ss_dssp HHHGGGCEEEEEE-----SSCC------------HHHHHHHHHHEEEEEEEEE
T ss_pred HHhCCCCCeEEEE-----CCCC------------HHHHHHHHHHHhcCCEEEE
Confidence 6556668999994 3432 1246778899999999987
No 322
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=94.28 E-value=0.02 Score=53.93 Aligned_cols=73 Identities=7% Similarity=0.064 Sum_probs=48.8
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCC-EE-EEEeCCCCC------CCCCcEEEecCccChhhHHHHH
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLP-LI-VAIDLQPMA------PIEGVIQVQGDITNARTAEVVI 112 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~-~I-vaVDl~~~~------~i~gV~~i~gDIt~~~t~~~I~ 112 (316)
...+|+||+||.||++..+.+... .. .| .|+|+.+.+ ..++. .+++||++... ..+.
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~-------------~~~~v~~a~e~d~~a~~ty~~N~~~~-~~~~DI~~~~~-~~i~ 73 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSI-------------NINATFIPFDINEIANKIYSKNFKEE-VQVKNLDSISI-KQIE 73 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSC-------------CCCEEEEEECCCHHHHHHHHHHHCCC-CBCCCTTTCCH-HHHH
T ss_pred CCCEEEEECCChhHHHHHHHHcCC-------------CceEEEEEEECCHHHHHHHHHHCCCC-cccCChhhcCH-HHhc
Confidence 456999999999999988876421 12 45 699999853 23333 67899998753 2232
Q ss_pred hhcCCccccEEEeCCCCCCCCC
Q 021161 113 RHFDGCKADLVVCDGAPDVTGL 134 (316)
Q Consensus 113 ~~~~~~~~DlVvsDgapdvtG~ 134 (316)
+ ..+|+|+... .|++.
T Consensus 74 ~----~~~Dil~ggp--PCQ~f 89 (327)
T 3qv2_A 74 S----LNCNTWFMSP--PCQPY 89 (327)
T ss_dssp H----TCCCEEEECC--CCTTC
T ss_pred c----CCCCEEEecC--CccCc
Confidence 2 2699999743 35544
No 323
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=94.24 E-value=0.054 Score=50.55 Aligned_cols=97 Identities=19% Similarity=0.156 Sum_probs=60.2
Q ss_pred cCCCCeEEEECCCC-CHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-C---CCCcEEEecCccChhhHHHHHh
Q 021161 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-P---IEGVIQVQGDITNARTAEVVIR 113 (316)
Q Consensus 39 ~~~~~rVLDLcagP-G~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-~---i~gV~~i~gDIt~~~t~~~I~~ 113 (316)
++++.+||=+|+|+ |.....+++..+ ..+|+++|.++.. . --|...+ -|..+....+.+.+
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~G-------------a~~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~v~~ 229 (352)
T 3fpc_A 164 IKLGDTVCVIGIGPVGLMSVAGANHLG-------------AGRIFAVGSRKHCCDIALEYGATDI-INYKNGDIVEQILK 229 (352)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTTT-------------CSSEEEECCCHHHHHHHHHHTCCEE-ECGGGSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-------------CcEEEEECCCHHHHHHHHHhCCceE-EcCCCcCHHHHHHH
Confidence 46889999999755 444444555442 1279999987642 1 1133211 13334445556666
Q ss_pred hcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEE
Q 021161 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (316)
Q Consensus 114 ~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~K 166 (316)
...+..+|+|+- ++|.. ..+..+.++|++||+++.-
T Consensus 230 ~t~g~g~D~v~d-----~~g~~------------~~~~~~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 230 ATDGKGVDKVVI-----AGGDV------------HTFAQAVKMIKPGSDIGNV 265 (352)
T ss_dssp HTTTCCEEEEEE-----CSSCT------------THHHHHHHHEEEEEEEEEC
T ss_pred HcCCCCCCEEEE-----CCCCh------------HHHHHHHHHHhcCCEEEEe
Confidence 666678999994 33321 2356788999999999873
No 324
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=94.13 E-value=0.063 Score=50.97 Aligned_cols=105 Identities=18% Similarity=0.141 Sum_probs=61.1
Q ss_pred cCCCCeEEEECCCC-CHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----CCCCcEEEecCccChh-hHHHHH
Q 021161 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNAR-TAEVVI 112 (316)
Q Consensus 39 ~~~~~rVLDLcagP-G~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----~i~gV~~i~gDIt~~~-t~~~I~ 112 (316)
++++.+||-+|||+ |.+...+++.++ ..+|+++|.++.. .--|...+ |.++.. ..+.+.
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlAk~~G-------------a~~Vi~~~~~~~~~~~a~~lGa~~i--~~~~~~~~~~~v~ 247 (398)
T 1kol_A 183 VGPGSTVYVAGAGPVGLAAAASARLLG-------------AAVVIVGDLNPARLAHAKAQGFEIA--DLSLDTPLHEQIA 247 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT-------------CSEEEEEESCHHHHHHHHHTTCEEE--ETTSSSCHHHHHH
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCC-------------CCeEEEEcCCHHHHHHHHHcCCcEE--ccCCcchHHHHHH
Confidence 46889999999766 555656666653 1379999988732 11255433 333222 244555
Q ss_pred hhcCCccccEEEeCCCCCCC-----CCCCccHHHHHHHHHHHHHHHHHcccCCcEEEE
Q 021161 113 RHFDGCKADLVVCDGAPDVT-----GLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (316)
Q Consensus 113 ~~~~~~~~DlVvsDgapdvt-----G~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~ 165 (316)
+...+..+|+|+--.....+ +.+..+. ...+..++++|++||++++
T Consensus 248 ~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~~G~iv~ 298 (398)
T 1kol_A 248 ALLGEPEVDCAVDAVGFEARGHGHEGAKHEAP-------ATVLNSLMQVTRVAGKIGI 298 (398)
T ss_dssp HHHSSSCEEEEEECCCTTCBCSSTTGGGSBCT-------THHHHHHHHHEEEEEEEEE
T ss_pred HHhCCCCCCEEEECCCCcccccccccccccch-------HHHHHHHHHHHhcCCEEEE
Confidence 55555679999853211100 0111111 1246678899999999986
No 325
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=94.02 E-value=0.31 Score=45.80 Aligned_cols=96 Identities=17% Similarity=0.143 Sum_probs=59.6
Q ss_pred cCCCCeEEEECCCC-CHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----CCCCcEEEecCcc--ChhhHHHH
Q 021161 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDIT--NARTAEVV 111 (316)
Q Consensus 39 ~~~~~rVLDLcagP-G~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----~i~gV~~i~gDIt--~~~t~~~I 111 (316)
++++.+||=+|||+ |.....+++.++ ..+|+++|.++.. .--|...+ -|.. +....+.+
T Consensus 191 ~~~g~~VlV~GaG~vG~~a~q~a~~~G-------------a~~Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~~~~~~~i 256 (378)
T 3uko_A 191 VEPGSNVAIFGLGTVGLAVAEGAKTAG-------------ASRIIGIDIDSKKYETAKKFGVNEF-VNPKDHDKPIQEVI 256 (378)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHHT-------------CSCEEEECSCTTHHHHHHTTTCCEE-ECGGGCSSCHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-------------CCeEEEEcCCHHHHHHHHHcCCcEE-EccccCchhHHHHH
Confidence 46789999999864 555555666653 1389999988742 11233221 1222 23334455
Q ss_pred HhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCC-cEEEEE
Q 021161 112 IRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEG-GKFIAK 166 (316)
Q Consensus 112 ~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpG-G~fV~K 166 (316)
.+...+ .+|+|+- ++|. ...+..+.++|++| |+++.-
T Consensus 257 ~~~~~g-g~D~vid-----~~g~------------~~~~~~~~~~l~~g~G~iv~~ 294 (378)
T 3uko_A 257 VDLTDG-GVDYSFE-----CIGN------------VSVMRAALECCHKGWGTSVIV 294 (378)
T ss_dssp HHHTTS-CBSEEEE-----CSCC------------HHHHHHHHHTBCTTTCEEEEC
T ss_pred HHhcCC-CCCEEEE-----CCCC------------HHHHHHHHHHhhccCCEEEEE
Confidence 555555 8999994 3442 13467788999997 999873
No 326
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=93.81 E-value=0.042 Score=54.51 Aligned_cols=75 Identities=16% Similarity=0.146 Sum_probs=49.1
Q ss_pred CCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC------CC---CCcEEEecCccChhh-----
Q 021161 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PI---EGVIQVQGDITNART----- 107 (316)
Q Consensus 42 ~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~------~i---~gV~~i~gDIt~~~t----- 107 (316)
..+|+||+||.||++.-+.+... -.|.|+|+.+.+ .. ++...+.+||++...
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG~--------------~~v~avE~d~~A~~ty~~N~~~~p~~~~~~~DI~~i~~~~~~~ 153 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIGG--------------QCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDITLSHQEG 153 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTTE--------------EEEEEECCCHHHHHHHHHHSCCCTTTCEEESCTHHHHCTTCTT
T ss_pred cceEEEecCCccHHHHHHHHCCC--------------EEEEEEeCCHHHHHHHHHhcccCCCcceeccchhhhhhccccc
Confidence 46999999999999988864311 247899999853 12 566778899987541
Q ss_pred ------HHHHHhhcCCccccEEEeCCCCCCCCC
Q 021161 108 ------AEVVIRHFDGCKADLVVCDGAPDVTGL 134 (316)
Q Consensus 108 ------~~~I~~~~~~~~~DlVvsDgapdvtG~ 134 (316)
.+.|...+ ..+|+|+.. |.|++.
T Consensus 154 ~~~~~~~~~i~~~~--~~~Dvl~gG--pPCQ~F 182 (482)
T 3me5_A 154 VSDEAAAEHIRQHI--PEHDVLLAG--FPCQPF 182 (482)
T ss_dssp SCHHHHHHHHHHHS--CCCSEEEEE--CCCCCC
T ss_pred cchhhHHhhhhhcC--CCCCEEEec--CCCcch
Confidence 11122222 368998864 335443
No 327
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=93.76 E-value=0.14 Score=47.83 Aligned_cols=123 Identities=20% Similarity=0.254 Sum_probs=70.6
Q ss_pred CCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCC------------------CC-----C--cE
Q 021161 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP------------------IE-----G--VI 96 (316)
Q Consensus 42 ~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~------------------i~-----g--V~ 96 (316)
.-+|+|+|-|+|--.....+..... ......+.++++..++.. .+ + ++
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~-------~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~ 169 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEV-------NPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLK 169 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHH-------CTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEE
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHh-------CCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEE
Confidence 3589999999997654433221100 001124678888765421 01 1 23
Q ss_pred EEecCccChhhHHHHHhhcCCccccEEEeCC-CCCCC-CCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCCCHH
Q 021161 97 QVQGDITNARTAEVVIRHFDGCKADLVVCDG-APDVT-GLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTS 174 (316)
Q Consensus 97 ~i~gDIt~~~t~~~I~~~~~~~~~DlVvsDg-apdvt-G~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~~~~ 174 (316)
...||+.. .+..+....||+|.-|| +|... .+|. ...+....++++|||+|+. |... .
T Consensus 170 l~~GDa~~------~l~~l~~~~~Da~flDgFsP~kNPeLWs----------~e~f~~l~~~~~pgg~laT--Ytaa--g 229 (308)
T 3vyw_A 170 VLLGDARK------RIKEVENFKADAVFHDAFSPYKNPELWT----------LDFLSLIKERIDEKGYWVS--YSSS--L 229 (308)
T ss_dssp EEESCHHH------HGGGCCSCCEEEEEECCSCTTTSGGGGS----------HHHHHHHHTTEEEEEEEEE--SCCC--H
T ss_pred EEechHHH------HHhhhcccceeEEEeCCCCcccCcccCC----------HHHHHHHHHHhCCCcEEEE--EeCc--H
Confidence 45677654 23345556899999998 45332 1222 2456778899999999985 5432 3
Q ss_pred HHHHHHHhc-CCceEEecC
Q 021161 175 LLYCQLKLF-FPVVTFAKP 192 (316)
Q Consensus 175 ~l~~~l~~~-F~~V~~~KP 192 (316)
.+...|... | .|.-.+.
T Consensus 230 ~VRR~L~~aGF-~V~k~~G 247 (308)
T 3vyw_A 230 SVRKSLLTLGF-KVGSSRE 247 (308)
T ss_dssp HHHHHHHHTTC-EEEEEEC
T ss_pred HHHHHHHHCCC-EEEecCC
Confidence 444445544 6 3555443
No 328
>1ej6_A Lambda2; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_U
Probab=93.54 E-value=0.11 Score=55.81 Aligned_cols=112 Identities=21% Similarity=0.240 Sum_probs=78.4
Q ss_pred EEecCccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEccCCCHH--
Q 021161 97 QVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTS-- 174 (316)
Q Consensus 97 ~i~gDIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~~~~~~-- 174 (316)
+.+|-|.+.. ..+.-+.|-+|.||----+.|..|+ ........+.|..++++.-+||.+|+|+--+ ...
T Consensus 554 V~~G~I~D~~------~p~pTGtf~fVYSDvDQV~dgg~Dl--~Aasr~~~~~l~~~l~~tt~GG~~VvKiNFP-T~~~W 624 (1289)
T 1ej6_A 554 VARGAIVDLA------RPFPSGDYQFVYSDVDQVVDGHDDL--SISSGLVESLLSSCMHATAPGGSFVVKINFP-TRPVW 624 (1289)
T ss_dssp CSSSBCCCTT------SCCSCCCEEEEEECCCCCCSSSTTH--HHHHHHHHHHHHHHHHHEEEEEEEEEEESSC-CHHHH
T ss_pred eccceeeeee------ccCCCcceEEEEechhhhhcCCCcc--hhhHHHHHHHHHHHHHhhccCceEEEEEcCC-ChHHH
Confidence 3455555532 2366789999999963323333333 3456777888999999999999999999322 222
Q ss_pred -HHHHHHHhcCCceEEecCCCCCCCCcceEEEEecccCCCCCCCcc
Q 021161 175 -LLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVCENYFPPEGFNPKD 219 (316)
Q Consensus 175 -~l~~~l~~~F~~V~~~KP~sSR~~S~E~fvVc~gf~~p~~~~p~~ 219 (316)
.|..+...+|...++.||-- ..|.|.|+||.|......+.|+.
T Consensus 625 ~~lf~~~~~~~~s~~lvKP~I--vNnvEvflv~~~r~~~g~l~~t~ 668 (1289)
T 1ej6_A 625 HYIEQKILPNITSYMLIKPFV--TNNVELFFVAFGVHQHSSLTWTS 668 (1289)
T ss_dssp HHHHHHTGGGEEEEEEEEEES--SSSCCEEEEEEEESCCCCCCBCH
T ss_pred HHHHHhhccccceeeeeccee--ecceEEEEEEEeeecCCCCCCch
Confidence 34444555678899999985 45789999999999767777643
No 329
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=93.39 E-value=0.45 Score=44.57 Aligned_cols=95 Identities=13% Similarity=0.051 Sum_probs=57.5
Q ss_pred cCCCCeEEEECCCC-CHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCC----CCCcEEEecCccC--hhhHHHH
Q 021161 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITN--ARTAEVV 111 (316)
Q Consensus 39 ~~~~~rVLDLcagP-G~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~----i~gV~~i~gDIt~--~~t~~~I 111 (316)
++++.+||=+|+|+ |.....+++.++ ..+|+++|.++... --|...+ -|..+ ....+.+
T Consensus 189 ~~~g~~VlV~GaG~vG~~aiqlak~~G-------------a~~Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~~~~~~~i 254 (373)
T 1p0f_A 189 VTPGSTCAVFGLGGVGFSAIVGCKAAG-------------ASRIIGVGTHKDKFPKAIELGATEC-LNPKDYDKPIYEVI 254 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHT-------------CSEEEEECSCGGGHHHHHHTTCSEE-ECGGGCSSCHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-------------CCeEEEECCCHHHHHHHHHcCCcEE-EecccccchHHHHH
Confidence 46889999999765 444555566553 12899999877421 1233211 12222 2234445
Q ss_pred HhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCC-cEEEE
Q 021161 112 IRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEG-GKFIA 165 (316)
Q Consensus 112 ~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpG-G~fV~ 165 (316)
.+...+ .+|+|+- ++|. ...+..+.++|++| |++|.
T Consensus 255 ~~~t~g-g~Dvvid-----~~g~------------~~~~~~~~~~l~~~~G~iv~ 291 (373)
T 1p0f_A 255 CEKTNG-GVDYAVE-----CAGR------------IETMMNALQSTYCGSGVTVV 291 (373)
T ss_dssp HHHTTS-CBSEEEE-----CSCC------------HHHHHHHHHTBCTTTCEEEE
T ss_pred HHHhCC-CCCEEEE-----CCCC------------HHHHHHHHHHHhcCCCEEEE
Confidence 544444 8999994 3432 12356788999999 99986
No 330
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=93.22 E-value=1.1 Score=40.76 Aligned_cols=74 Identities=23% Similarity=0.276 Sum_probs=54.5
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCC------CCCCCcEEEecCccChhhHHHHHhh
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM------APIEGVIQVQGDITNARTAEVVIRH 114 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~------~~i~gV~~i~gDIt~~~t~~~I~~~ 114 (316)
.+++||=.| |+|..-..+++.+.. .+.+|++++..+. ..+.++.++.+|+++...+..+.+.
T Consensus 19 ~~~~vlVTG-asG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~ 86 (330)
T 2pzm_A 19 SHMRILITG-GAGCLGSNLIEHWLP-----------QGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDS 86 (330)
T ss_dssp TCCEEEEET-TTSHHHHHHHHHHGG-----------GTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHH-----------CCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhh
Confidence 357888777 568888899888742 2468999998543 2246889999999998776655543
Q ss_pred cCCccccEEEeCCCC
Q 021161 115 FDGCKADLVVCDGAP 129 (316)
Q Consensus 115 ~~~~~~DlVvsDgap 129 (316)
+ .+|+|+...+.
T Consensus 87 ~---~~D~vih~A~~ 98 (330)
T 2pzm_A 87 F---KPTHVVHSAAA 98 (330)
T ss_dssp H---CCSEEEECCCC
T ss_pred c---CCCEEEECCcc
Confidence 2 69999998764
No 331
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=93.15 E-value=0.11 Score=48.93 Aligned_cols=96 Identities=17% Similarity=0.151 Sum_probs=58.4
Q ss_pred cCCCCeEEEECCCC-CHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----CCCCcEEEecCccChhhHHHHHh
Q 021161 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNARTAEVVIR 113 (316)
Q Consensus 39 ~~~~~rVLDLcagP-G~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----~i~gV~~i~gDIt~~~t~~~I~~ 113 (316)
++++.+||=+|+|+ |.++..+++.++ ..+|+++|.++.. .--|.... -|..+....+.+.+
T Consensus 180 ~~~g~~VlV~GaG~vG~~aiqlak~~G-------------a~~Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~~~~~i~~ 245 (370)
T 4ej6_A 180 IKAGSTVAILGGGVIGLLTVQLARLAG-------------ATTVILSTRQATKRRLAEEVGATAT-VDPSAGDVVEAIAG 245 (370)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT-------------CSEEEEECSCHHHHHHHHHHTCSEE-ECTTSSCHHHHHHS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-------------CCEEEEECCCHHHHHHHHHcCCCEE-ECCCCcCHHHHHHh
Confidence 47889999999855 445555566553 2389999988632 01133211 13334444445554
Q ss_pred ---hcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEE
Q 021161 114 ---HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (316)
Q Consensus 114 ---~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~K 166 (316)
... +.+|+|+- ++|. ...+..+.++|++||++++-
T Consensus 246 ~~~~~~-gg~Dvvid-----~~G~------------~~~~~~~~~~l~~~G~vv~~ 283 (370)
T 4ej6_A 246 PVGLVP-GGVDVVIE-----CAGV------------AETVKQSTRLAKAGGTVVIL 283 (370)
T ss_dssp TTSSST-TCEEEEEE-----CSCC------------HHHHHHHHHHEEEEEEEEEC
T ss_pred hhhccC-CCCCEEEE-----CCCC------------HHHHHHHHHHhccCCEEEEE
Confidence 333 38999994 3332 13467788999999999873
No 332
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=93.14 E-value=0.5 Score=44.28 Aligned_cols=94 Identities=14% Similarity=0.072 Sum_probs=56.6
Q ss_pred cCCCCeEEEECCCC-CHHHHHHHHHhCCCCCCCCCCCCCCCC-EEEEEeCCCCCC----CCCcEEEecCccC--hhhHHH
Q 021161 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLP-LIVAIDLQPMAP----IEGVIQVQGDITN--ARTAEV 110 (316)
Q Consensus 39 ~~~~~rVLDLcagP-G~wSq~La~~l~~~~~~~~~~~~~~~~-~IvaVDl~~~~~----i~gV~~i~gDIt~--~~t~~~ 110 (316)
++++.+||=+|+|+ |.....+++.++ + +|+++|.++... --|...+ -|..+ ....+.
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~G--------------a~~Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~~~~~~~ 257 (376)
T 1e3i_A 193 VTPGSTCAVFGLGCVGLSAIIGCKIAG--------------ASRIIAIDINGEKFPKAKALGATDC-LNPRELDKPVQDV 257 (376)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT--------------CSEEEEECSCGGGHHHHHHTTCSEE-ECGGGCSSCHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC--------------CCeEEEEcCCHHHHHHHHHhCCcEE-EccccccchHHHH
Confidence 46789999999754 444444555543 4 899999877431 1233211 13222 223344
Q ss_pred HHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCC-cEEEE
Q 021161 111 VIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEG-GKFIA 165 (316)
Q Consensus 111 I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpG-G~fV~ 165 (316)
+.+...+ .+|+|+- ++|. ...+..++++|++| |++|.
T Consensus 258 v~~~~~~-g~Dvvid-----~~G~------------~~~~~~~~~~l~~~~G~iv~ 295 (376)
T 1e3i_A 258 ITELTAG-GVDYSLD-----CAGT------------AQTLKAAVDCTVLGWGSCTV 295 (376)
T ss_dssp HHHHHTS-CBSEEEE-----SSCC------------HHHHHHHHHTBCTTTCEEEE
T ss_pred HHHHhCC-CccEEEE-----CCCC------------HHHHHHHHHHhhcCCCEEEE
Confidence 5444444 7999983 4442 12456788999999 99986
No 333
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=93.04 E-value=0.087 Score=48.31 Aligned_cols=35 Identities=20% Similarity=0.077 Sum_probs=29.6
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCC
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM 89 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~ 89 (316)
.++..|||++||+|..+.++++.. .+++|+|+++.
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~g---------------~~~~g~e~~~~ 268 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARWG---------------RRALGVELVPR 268 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTT---------------CEEEEEESCHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHcC---------------CeEEEEeCCHH
Confidence 578899999999999998876532 58999999984
No 334
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=92.97 E-value=0.27 Score=45.48 Aligned_cols=95 Identities=19% Similarity=0.160 Sum_probs=59.8
Q ss_pred cCCCCeEEEECCC--CCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCC----CCCcEEEecCccChhhHHHHH
Q 021161 39 FEGVKRVVDLCAA--PGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITNARTAEVVI 112 (316)
Q Consensus 39 ~~~~~rVLDLcag--PG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~----i~gV~~i~gDIt~~~t~~~I~ 112 (316)
++++.+||=.|+| -|.....+++..+ ++|+++|.++... --|...+ -|..+....+.+.
T Consensus 142 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~G--------------a~Vi~~~~~~~~~~~~~~lga~~~-~~~~~~~~~~~~~ 206 (340)
T 3gms_A 142 LQRNDVLLVNACGSAIGHLFAQLSQILN--------------FRLIAVTRNNKHTEELLRLGAAYV-IDTSTAPLYETVM 206 (340)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHT--------------CEEEEEESSSTTHHHHHHHTCSEE-EETTTSCHHHHHH
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHcC--------------CEEEEEeCCHHHHHHHHhCCCcEE-EeCCcccHHHHHH
Confidence 4788999999987 4555555666553 6999999887531 0122211 1344444555666
Q ss_pred hhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEE
Q 021161 113 RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (316)
Q Consensus 113 ~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~K 166 (316)
+...+..+|+|+.. .|.. .+..+..+|++||+++.-
T Consensus 207 ~~~~~~g~Dvvid~-----~g~~-------------~~~~~~~~l~~~G~iv~~ 242 (340)
T 3gms_A 207 ELTNGIGADAAIDS-----IGGP-------------DGNELAFSLRPNGHFLTI 242 (340)
T ss_dssp HHTTTSCEEEEEES-----SCHH-------------HHHHHHHTEEEEEEEEEC
T ss_pred HHhCCCCCcEEEEC-----CCCh-------------hHHHHHHHhcCCCEEEEE
Confidence 66666789999953 3321 112344799999999973
No 335
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=92.83 E-value=0.39 Score=42.54 Aligned_cols=76 Identities=13% Similarity=0.020 Sum_probs=53.0
Q ss_pred CCeEEEECCCC-CHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC---------CCCCcEEEecCccChhhHHHH
Q 021161 42 VKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAEVV 111 (316)
Q Consensus 42 ~~rVLDLcagP-G~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~---------~i~gV~~i~gDIt~~~t~~~I 111 (316)
+++||=.|++. |+.-..+++++.. .+.+|+.+|.++-. ...++.++++|+++...++.+
T Consensus 9 ~k~vlVTGas~~~gIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~ 77 (265)
T 1qsg_A 9 GKRILVTGVASKLSIAYGIAQAMHR-----------EGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTM 77 (265)
T ss_dssp TCEEEECCCCSTTSHHHHHHHHHHH-----------TTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHH
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHH-----------CCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHH
Confidence 46788888763 8888888888742 34789999987611 013456889999998776655
Q ss_pred HhhcC--CccccEEEeCCC
Q 021161 112 IRHFD--GCKADLVVCDGA 128 (316)
Q Consensus 112 ~~~~~--~~~~DlVvsDga 128 (316)
.+... -+++|+||.+.+
T Consensus 78 ~~~~~~~~g~iD~lv~~Ag 96 (265)
T 1qsg_A 78 FAELGKVWPKFDGFVHSIG 96 (265)
T ss_dssp HHHHHTTCSSEEEEEECCC
T ss_pred HHHHHHHcCCCCEEEECCC
Confidence 54321 147999999875
No 336
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=92.83 E-value=1.1 Score=38.05 Aligned_cols=71 Identities=13% Similarity=0.069 Sum_probs=52.2
Q ss_pred CeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC--CCCCcEEEecCccC-hhhHHHHHhhcCCcc
Q 021161 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--PIEGVIQVQGDITN-ARTAEVVIRHFDGCK 119 (316)
Q Consensus 43 ~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~--~i~gV~~i~gDIt~-~~t~~~I~~~~~~~~ 119 (316)
++||=.| |+|..-..+++++.. .+.+|++++.++.. ...+++++++|+++ .+.+ .+.+. .
T Consensus 1 M~ilItG-atG~iG~~l~~~L~~-----------~g~~V~~~~R~~~~~~~~~~~~~~~~D~~d~~~~~---~~~~~--~ 63 (219)
T 3dqp_A 1 MKIFIVG-STGRVGKSLLKSLST-----------TDYQIYAGARKVEQVPQYNNVKAVHFDVDWTPEEM---AKQLH--G 63 (219)
T ss_dssp CEEEEES-TTSHHHHHHHHHHTT-----------SSCEEEEEESSGGGSCCCTTEEEEECCTTSCHHHH---HTTTT--T
T ss_pred CeEEEEC-CCCHHHHHHHHHHHH-----------CCCEEEEEECCccchhhcCCceEEEecccCCHHHH---HHHHc--C
Confidence 3566566 679999999998852 34789999988742 34789999999999 6544 33443 5
Q ss_pred ccEEEeCCCCC
Q 021161 120 ADLVVCDGAPD 130 (316)
Q Consensus 120 ~DlVvsDgapd 130 (316)
+|.|+...+..
T Consensus 64 ~d~vi~~ag~~ 74 (219)
T 3dqp_A 64 MDAIINVSGSG 74 (219)
T ss_dssp CSEEEECCCCT
T ss_pred CCEEEECCcCC
Confidence 99999987643
No 337
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=92.78 E-value=0.17 Score=45.45 Aligned_cols=64 Identities=14% Similarity=0.095 Sum_probs=42.8
Q ss_pred cEEEecCccChhhHHHHHhhcCCccccEEEeCCCCCCCCCC------CccHHHHHHHHHHHHHHHHHcccCCcEEEEEE
Q 021161 95 VIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLH------DMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (316)
Q Consensus 95 V~~i~gDIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~------~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Ki 167 (316)
...++||..+ .++.+..+++|+|++|.+.. ++.. +.++| ...+...+..+.++|+|||.+++.+
T Consensus 5 ~~l~~gD~~~------~l~~l~~~~vdlI~~DPPY~-~~~~~~d~~~~~~~y--~~~~~~~l~~~~~~Lk~~g~i~v~~ 74 (260)
T 1g60_A 5 NKIHQMNCFD------FLDQVENKSVQLAVIDPPYN-LSKADWDSFDSHNEF--LAFTYRWIDKVLDKLDKDGSLYIFN 74 (260)
T ss_dssp SSEEECCHHH------HHHHSCTTCEEEEEECCCCS-SCSSGGGCCSSHHHH--HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CeEEechHHH------HHHhccccccCEEEECCCCC-CCcccccccCCHHHH--HHHHHHHHHHHHHHhcCCeEEEEEc
Confidence 4567888764 23446667999999997543 3321 12222 2345567788899999999998865
No 338
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=92.77 E-value=0.6 Score=43.68 Aligned_cols=94 Identities=15% Similarity=0.145 Sum_probs=56.2
Q ss_pred cCCCCeEEEECCCC-CHHHHHHHHHhCCCCCCCCCCCCCCCC-EEEEEeCCCCCC----CCCcEEEecCccC--hhhHHH
Q 021161 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLP-LIVAIDLQPMAP----IEGVIQVQGDITN--ARTAEV 110 (316)
Q Consensus 39 ~~~~~rVLDLcagP-G~wSq~La~~l~~~~~~~~~~~~~~~~-~IvaVDl~~~~~----i~gV~~i~gDIt~--~~t~~~ 110 (316)
++++.+||-+|+|+ |.....+++.++ + +|+++|.++... --|...+ -|..+ ....+.
T Consensus 190 ~~~g~~VlV~GaG~vG~~a~qla~~~G--------------a~~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~ 254 (374)
T 1cdo_A 190 VEPGSTCAVFGLGAVGLAAVMGCHSAG--------------AKRIIAVDLNPDKFEKAKVFGATDF-VNPNDHSEPISQV 254 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT--------------CSEEEEECSCGGGHHHHHHTTCCEE-ECGGGCSSCHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC--------------CCEEEEEcCCHHHHHHHHHhCCceE-EeccccchhHHHH
Confidence 46789999999754 444444555543 4 899999877421 1243211 13332 223334
Q ss_pred HHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCC-cEEEE
Q 021161 111 VIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEG-GKFIA 165 (316)
Q Consensus 111 I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpG-G~fV~ 165 (316)
+.+...+ .+|+|+- ++|. ...+..+.++|++| |++|.
T Consensus 255 ~~~~~~~-g~D~vid-----~~g~------------~~~~~~~~~~l~~~~G~iv~ 292 (374)
T 1cdo_A 255 LSKMTNG-GVDFSLE-----CVGN------------VGVMRNALESCLKGWGVSVL 292 (374)
T ss_dssp HHHHHTS-CBSEEEE-----CSCC------------HHHHHHHHHTBCTTTCEEEE
T ss_pred HHHHhCC-CCCEEEE-----CCCC------------HHHHHHHHHHhhcCCcEEEE
Confidence 4444443 7999994 3332 12356788999999 99987
No 339
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=92.77 E-value=0.13 Score=48.13 Aligned_cols=95 Identities=13% Similarity=0.023 Sum_probs=58.3
Q ss_pred cCCCCeEEEECCCC-CHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----CCCCcEEEecCccChhhHHHHHh
Q 021161 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNARTAEVVIR 113 (316)
Q Consensus 39 ~~~~~rVLDLcagP-G~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----~i~gV~~i~gDIt~~~t~~~I~~ 113 (316)
++++.+||=+|+|+ |.....+++.. +++|+++|.++.. .--|...+. |-......+.+.+
T Consensus 187 ~~~g~~VlV~G~G~vG~~a~qla~~~--------------Ga~Vi~~~~~~~~~~~~~~lGa~~vi-~~~~~~~~~~v~~ 251 (363)
T 3uog_A 187 LRAGDRVVVQGTGGVALFGLQIAKAT--------------GAEVIVTSSSREKLDRAFALGADHGI-NRLEEDWVERVYA 251 (363)
T ss_dssp CCTTCEEEEESSBHHHHHHHHHHHHT--------------TCEEEEEESCHHHHHHHHHHTCSEEE-ETTTSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc--------------CCEEEEEecCchhHHHHHHcCCCEEE-cCCcccHHHHHHH
Confidence 46889999999765 44444455554 3699999987632 001322111 2122334455666
Q ss_pred hcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEE
Q 021161 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (316)
Q Consensus 114 ~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~K 166 (316)
...+..+|+|+-. .|-. .+..+.++|++||+++.-
T Consensus 252 ~~~g~g~D~vid~-----~g~~-------------~~~~~~~~l~~~G~iv~~ 286 (363)
T 3uog_A 252 LTGDRGADHILEI-----AGGA-------------GLGQSLKAVAPDGRISVI 286 (363)
T ss_dssp HHTTCCEEEEEEE-----TTSS-------------CHHHHHHHEEEEEEEEEE
T ss_pred HhCCCCceEEEEC-----CChH-------------HHHHHHHHhhcCCEEEEE
Confidence 6666689999853 3311 145678899999999974
No 340
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=92.72 E-value=0.14 Score=47.84 Aligned_cols=89 Identities=12% Similarity=-0.024 Sum_probs=55.0
Q ss_pred CeEEEECCCCCHHHHHH-HHHh-CCCCCCCCCCCCCCCCE-EEEEeCCCC---C-C---CCCcEEEecCccChhhHHHHH
Q 021161 43 KRVVDLCAAPGSWSQVL-SRKL-YLPAKLSPDSREGDLPL-IVAIDLQPM---A-P---IEGVIQVQGDITNARTAEVVI 112 (316)
Q Consensus 43 ~rVLDLcagPG~wSq~L-a~~l-~~~~~~~~~~~~~~~~~-IvaVDl~~~---~-~---i~gV~~i~gDIt~~~t~~~I~ 112 (316)
.+||=+|+ |+..+.+ .+.. .. .+.+ |+++|.++. . . --|...+ |..+....+ +.
T Consensus 174 ~~VlV~Ga--G~vG~~a~iqla~k~-----------~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v--~~~~~~~~~-i~ 237 (357)
T 2b5w_A 174 SSAFVLGN--GSLGLLTLAMLKVDD-----------KGYENLYCLGRRDRPDPTIDIIEELDATYV--DSRQTPVED-VP 237 (357)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHCT-----------TCCCEEEEEECCCSSCHHHHHHHHTTCEEE--ETTTSCGGG-HH
T ss_pred CEEEEECC--CHHHHHHHHHHHHHH-----------cCCcEEEEEeCCcccHHHHHHHHHcCCccc--CCCccCHHH-HH
Confidence 99999997 5555544 4433 21 1355 999998875 2 1 1255544 544433333 44
Q ss_pred hhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEE
Q 021161 113 RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (316)
Q Consensus 113 ~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~K 166 (316)
+. .+ .+|+|+- ++|. ...+..+.++|++||+++.-
T Consensus 238 ~~-~g-g~Dvvid-----~~g~------------~~~~~~~~~~l~~~G~iv~~ 272 (357)
T 2b5w_A 238 DV-YE-QMDFIYE-----ATGF------------PKHAIQSVQALAPNGVGALL 272 (357)
T ss_dssp HH-SC-CEEEEEE-----CSCC------------HHHHHHHHHHEEEEEEEEEC
T ss_pred Hh-CC-CCCEEEE-----CCCC------------hHHHHHHHHHHhcCCEEEEE
Confidence 44 44 8999983 3442 12356788999999999873
No 341
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=92.66 E-value=0.17 Score=46.79 Aligned_cols=93 Identities=14% Similarity=0.089 Sum_probs=59.0
Q ss_pred cCCCCeEEEECCCC-CHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----CCCCcEEEecCccChhhHHHHHh
Q 021161 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNARTAEVVIR 113 (316)
Q Consensus 39 ~~~~~rVLDLcagP-G~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----~i~gV~~i~gDIt~~~t~~~I~~ 113 (316)
++++.+||-.|||+ |.....+++..+ .+|+++|.++.. .--|...+ -|..+....+.+.+
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~G--------------a~Vi~~~~~~~~~~~~~~lGa~~~-i~~~~~~~~~~~~~ 228 (340)
T 3s2e_A 164 TRPGQWVVISGIGGLGHVAVQYARAMG--------------LRVAAVDIDDAKLNLARRLGAEVA-VNARDTDPAAWLQK 228 (340)
T ss_dssp CCTTSEEEEECCSTTHHHHHHHHHHTT--------------CEEEEEESCHHHHHHHHHTTCSEE-EETTTSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCC--------------CeEEEEeCCHHHHHHHHHcCCCEE-EeCCCcCHHHHHHH
Confidence 46889999999876 777766777653 699999987632 11132211 13333334445554
Q ss_pred hcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEE
Q 021161 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (316)
Q Consensus 114 ~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~ 165 (316)
. .+ .+|+|+-. +|. -..+..+.++|++||+++.
T Consensus 229 ~-~g-~~d~vid~-----~g~------------~~~~~~~~~~l~~~G~iv~ 261 (340)
T 3s2e_A 229 E-IG-GAHGVLVT-----AVS------------PKAFSQAIGMVRRGGTIAL 261 (340)
T ss_dssp H-HS-SEEEEEES-----SCC------------HHHHHHHHHHEEEEEEEEE
T ss_pred h-CC-CCCEEEEe-----CCC------------HHHHHHHHHHhccCCEEEE
Confidence 2 23 79999854 221 1346778899999999987
No 342
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=92.60 E-value=0.65 Score=43.43 Aligned_cols=94 Identities=13% Similarity=0.067 Sum_probs=56.0
Q ss_pred cCCCCeEEEECCCC-CHHHHHHHHHhCCCCCCCCCCCCCCCC-EEEEEeCCCCCC----CCCcEEEecCccC--hhhHHH
Q 021161 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLP-LIVAIDLQPMAP----IEGVIQVQGDITN--ARTAEV 110 (316)
Q Consensus 39 ~~~~~rVLDLcagP-G~wSq~La~~l~~~~~~~~~~~~~~~~-~IvaVDl~~~~~----i~gV~~i~gDIt~--~~t~~~ 110 (316)
++++.+||=+|+|+ |.....+++.++ . +|+++|.++... --|...+ -|..+ ....+.
T Consensus 189 ~~~g~~VlV~GaG~vG~~a~qla~~~G--------------a~~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~ 253 (374)
T 2jhf_A 189 VTQGSTCAVFGLGGVGLSVIMGCKAAG--------------AARIIGVDINKDKFAKAKEVGATEC-VNPQDYKKPIQEV 253 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT--------------CSEEEEECSCGGGHHHHHHTTCSEE-ECGGGCSSCHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC--------------CCeEEEEcCCHHHHHHHHHhCCceE-ecccccchhHHHH
Confidence 46789999999754 444444555543 4 899999877421 1233211 13322 223334
Q ss_pred HHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCC-cEEEE
Q 021161 111 VIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEG-GKFIA 165 (316)
Q Consensus 111 I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpG-G~fV~ 165 (316)
+.+... +.+|+|+- ++|. ...+..+.++|++| |++|.
T Consensus 254 ~~~~~~-~g~D~vid-----~~g~------------~~~~~~~~~~l~~~~G~iv~ 291 (374)
T 2jhf_A 254 LTEMSN-GGVDFSFE-----VIGR------------LDTMVTALSCCQEAYGVSVI 291 (374)
T ss_dssp HHHHTT-SCBSEEEE-----CSCC------------HHHHHHHHHHBCTTTCEEEE
T ss_pred HHHHhC-CCCcEEEE-----CCCC------------HHHHHHHHHHhhcCCcEEEE
Confidence 444434 37999984 3332 12356788999999 99986
No 343
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=92.54 E-value=0.083 Score=49.58 Aligned_cols=98 Identities=17% Similarity=0.203 Sum_probs=58.1
Q ss_pred CCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC------CCCCcEEEecCccChhhHHHHHhhc
Q 021161 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIRHF 115 (316)
Q Consensus 42 ~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~------~i~gV~~i~gDIt~~~t~~~I~~~~ 115 (316)
+.+|+||+||.|+++.-+.+... -.|+++|+.+.+ ..+... .+||++... +.+
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~--------------~~v~~~e~d~~a~~t~~~N~~~~~--~~Di~~~~~-----~~~ 69 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGA--------------ECVYSNEWDKYAQEVYEMNFGEKP--EGDITQVNE-----KTI 69 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTC--------------EEEEEECCCHHHHHHHHHHHSCCC--BSCGGGSCG-----GGS
T ss_pred CCcEEEECCCcCHHHHHHHHCCC--------------eEEEEEeCCHHHHHHHHHHcCCCC--cCCHHHcCH-----hhC
Confidence 47999999999999988876421 357899999853 123322 789987542 122
Q ss_pred CCccccEEEeCCCCC---CCCCC-Cc-cHHHHHHHHHHHHHHHHHcccCCcEEEEE
Q 021161 116 DGCKADLVVCDGAPD---VTGLH-DM-DEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (316)
Q Consensus 116 ~~~~~DlVvsDgapd---vtG~~-~~-de~~~~~L~~aaL~~a~~vLkpGG~fV~K 166 (316)
..+|+|+.+.++. ..|.+ .. |+ ...|....+.++ ..++|- .|++.
T Consensus 70 --~~~D~l~~gpPCQ~fS~ag~~~g~~d~--r~~L~~~~~r~i-~~~~P~-~~~~E 119 (327)
T 2c7p_A 70 --PDHDILCAGFPCQAFSISGKQKGFEDS--RGTLFFDIARIV-REKKPK-VVFME 119 (327)
T ss_dssp --CCCSEEEEECCCTTTCTTSCCCGGGST--TSCHHHHHHHHH-HHHCCS-EEEEE
T ss_pred --CCCCEEEECCCCCCcchhcccCCCcch--hhHHHHHHHHHH-HhccCc-EEEEe
Confidence 3599999875321 12221 11 21 123444444443 456886 45554
No 344
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=92.39 E-value=0.16 Score=47.90 Aligned_cols=96 Identities=22% Similarity=0.235 Sum_probs=57.3
Q ss_pred cCCCCeEEEECCCC-CHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----CCCCcE-EEecCcc---ChhhHH
Q 021161 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVI-QVQGDIT---NARTAE 109 (316)
Q Consensus 39 ~~~~~rVLDLcagP-G~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----~i~gV~-~i~gDIt---~~~t~~ 109 (316)
++++.+||-+|+|+ |.....+++.++ ..+|+++|.++.. .--|.. ++ |.. +....+
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~G-------------a~~Vi~~~~~~~~~~~~~~lGa~~vi--~~~~~~~~~~~~ 257 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSLG-------------AENVIVIAGSPNRLKLAEEIGADLTL--NRRETSVEERRK 257 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTT-------------BSEEEEEESCHHHHHHHHHTTCSEEE--ETTTSCHHHHHH
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHcC-------------CceEEEEcCCHHHHHHHHHcCCcEEE--eccccCcchHHH
Confidence 56889999999543 333333444432 1489999987632 112332 22 222 333445
Q ss_pred HHHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEE
Q 021161 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (316)
Q Consensus 110 ~I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~K 166 (316)
.+.+...+..+|+|+- ++|.. ..+..+.++|++||++|.-
T Consensus 258 ~v~~~~~g~g~Dvvid-----~~g~~------------~~~~~~~~~l~~~G~iv~~ 297 (380)
T 1vj0_A 258 AIMDITHGRGADFILE-----ATGDS------------RALLEGSELLRRGGFYSVA 297 (380)
T ss_dssp HHHHHTTTSCEEEEEE-----CSSCT------------THHHHHHHHEEEEEEEEEC
T ss_pred HHHHHhCCCCCcEEEE-----CCCCH------------HHHHHHHHHHhcCCEEEEE
Confidence 5665555567999994 33321 1356778999999999873
No 345
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=92.28 E-value=0.64 Score=40.80 Aligned_cols=79 Identities=8% Similarity=-0.067 Sum_probs=55.6
Q ss_pred CCCCeEEEECCC-CCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC---------CCCCcEEEecCccChhhHH
Q 021161 40 EGVKRVVDLCAA-PGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAE 109 (316)
Q Consensus 40 ~~~~rVLDLcag-PG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~---------~i~gV~~i~gDIt~~~t~~ 109 (316)
..+++||=.|++ .|++-..+++++.. .+.+|+.++.+... ....+.++++|+++...++
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~ 80 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKR-----------EGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQID 80 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHH-----------TTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHH-----------cCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHH
Confidence 356889988885 47788888887742 34789999887421 1345788999999988766
Q ss_pred HHHhhcC--CccccEEEeCCCC
Q 021161 110 VVIRHFD--GCKADLVVCDGAP 129 (316)
Q Consensus 110 ~I~~~~~--~~~~DlVvsDgap 129 (316)
.+.+... .++.|+||.+.+.
T Consensus 81 ~~~~~~~~~~g~id~lv~nAg~ 102 (271)
T 3ek2_A 81 ALFASLKTHWDSLDGLVHSIGF 102 (271)
T ss_dssp HHHHHHHHHCSCEEEEEECCCC
T ss_pred HHHHHHHHHcCCCCEEEECCcc
Confidence 5544321 1479999998753
No 346
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=92.20 E-value=0.33 Score=43.34 Aligned_cols=77 Identities=10% Similarity=0.004 Sum_probs=54.6
Q ss_pred CCeEEEECCC-CCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC---------CCCCcEEEecCccChhhHHHH
Q 021161 42 VKRVVDLCAA-PGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAEVV 111 (316)
Q Consensus 42 ~~rVLDLcag-PG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~---------~i~gV~~i~gDIt~~~t~~~I 111 (316)
+++||=.|++ .|+.-..+++++.. .+.+|+.++.++.. ...++.++++|+++...+..+
T Consensus 6 ~k~vlVTGas~~~gIG~~~a~~l~~-----------~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~ 74 (275)
T 2pd4_A 6 GKKGLIVGVANNKSIAYGIAQSCFN-----------QGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSL 74 (275)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHT-----------TTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHH
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHH
Confidence 5688888886 48888999888742 35789999987631 023478899999998766655
Q ss_pred HhhcC--CccccEEEeCCCC
Q 021161 112 IRHFD--GCKADLVVCDGAP 129 (316)
Q Consensus 112 ~~~~~--~~~~DlVvsDgap 129 (316)
.+... -+++|+||.+.+.
T Consensus 75 ~~~~~~~~g~id~lv~nAg~ 94 (275)
T 2pd4_A 75 YNSVKKDLGSLDFIVHSVAF 94 (275)
T ss_dssp HHHHHHHTSCEEEEEECCCC
T ss_pred HHHHHHHcCCCCEEEECCcc
Confidence 44321 1479999998753
No 347
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=92.18 E-value=0.45 Score=42.26 Aligned_cols=76 Identities=16% Similarity=0.090 Sum_probs=54.3
Q ss_pred CCeEEEECC-CCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-------CC-CCcEEEecCccChhhHHHHH
Q 021161 42 VKRVVDLCA-APGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-------PI-EGVIQVQGDITNARTAEVVI 112 (316)
Q Consensus 42 ~~rVLDLca-gPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-------~i-~gV~~i~gDIt~~~t~~~I~ 112 (316)
+++||=.|+ |.|+.-..+++++.. .+.+|+.+|.++.. .+ ..+.++++|+++.+.++.+.
T Consensus 7 ~k~vlVTGa~~s~gIG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 75 (269)
T 2h7i_A 7 GKRILVSGIITDSSIAFHIARVAQE-----------QGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLA 75 (269)
T ss_dssp TCEEEECCCSSTTSHHHHHHHHHHH-----------TTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHH
T ss_pred CCEEEEECCCCCCchHHHHHHHHHH-----------CCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHH
Confidence 568888888 488899999888742 35789999987621 12 24778899999987666554
Q ss_pred hh----cC-CccccEEEeCCC
Q 021161 113 RH----FD-GCKADLVVCDGA 128 (316)
Q Consensus 113 ~~----~~-~~~~DlVvsDga 128 (316)
+. ++ ..++|+||.+.+
T Consensus 76 ~~~~~~~g~~~~iD~lv~nAg 96 (269)
T 2h7i_A 76 GRVTEAIGAGNKLDGVVHSIG 96 (269)
T ss_dssp HHHHHHHCTTCCEEEEEECCC
T ss_pred HHHHHHhCCCCCceEEEECCc
Confidence 43 32 127999999875
No 348
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=92.16 E-value=1.5 Score=40.21 Aligned_cols=75 Identities=12% Similarity=0.003 Sum_probs=53.0
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCC------------CC-----CCCcEEEecCcc
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM------------AP-----IEGVIQVQGDIT 103 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~------------~~-----i~gV~~i~gDIt 103 (316)
.+++||=.| |+|.....+++++.. ...+.+|+++|..+- .. -.++.++++|++
T Consensus 9 ~~~~vlVTG-atG~IG~~l~~~L~~---------~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~ 78 (362)
T 3sxp_A 9 ENQTILITG-GAGFVGSNLAFHFQE---------NHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADIN 78 (362)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHH---------HCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTT
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHh---------hCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCC
Confidence 356788777 679999999888741 002579999997543 11 235789999999
Q ss_pred ChhhHHHHHhhcCCccccEEEeCCCC
Q 021161 104 NARTAEVVIRHFDGCKADLVVCDGAP 129 (316)
Q Consensus 104 ~~~t~~~I~~~~~~~~~DlVvsDgap 129 (316)
+...+..+ ....+|+||..++.
T Consensus 79 d~~~~~~~----~~~~~D~vih~A~~ 100 (362)
T 3sxp_A 79 NPLDLRRL----EKLHFDYLFHQAAV 100 (362)
T ss_dssp CHHHHHHH----TTSCCSEEEECCCC
T ss_pred CHHHHHHh----hccCCCEEEECCcc
Confidence 98766554 23579999988763
No 349
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=92.14 E-value=0.69 Score=43.18 Aligned_cols=94 Identities=14% Similarity=0.066 Sum_probs=56.3
Q ss_pred cCCCCeEEEECCCC-CHHHHHHHHHhCCCCCCCCCCCCCCCC-EEEEEeCCCCCC----CCCcEEEecCccC--hhhHHH
Q 021161 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLP-LIVAIDLQPMAP----IEGVIQVQGDITN--ARTAEV 110 (316)
Q Consensus 39 ~~~~~rVLDLcagP-G~wSq~La~~l~~~~~~~~~~~~~~~~-~IvaVDl~~~~~----i~gV~~i~gDIt~--~~t~~~ 110 (316)
++++.+||=+|+|+ |.....+++.++ + +|+++|.++... --|...+ -|..+ ....+.
T Consensus 188 ~~~g~~VlV~GaG~vG~~avqla~~~G--------------a~~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~ 252 (373)
T 2fzw_A 188 LEPGSVCAVFGLGGVGLAVIMGCKVAG--------------ASRIIGVDINKDKFARAKEFGATEC-INPQDFSKPIQEV 252 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHT--------------CSEEEEECSCGGGHHHHHHHTCSEE-ECGGGCSSCHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC--------------CCeEEEEcCCHHHHHHHHHcCCceE-eccccccccHHHH
Confidence 46789999999754 444444555553 4 899999877431 0133211 12222 223344
Q ss_pred HHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCC-cEEEE
Q 021161 111 VIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEG-GKFIA 165 (316)
Q Consensus 111 I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpG-G~fV~ 165 (316)
+.+... +.+|+|+- ++|. ...+..+.++|++| |++|.
T Consensus 253 v~~~~~-~g~D~vid-----~~g~------------~~~~~~~~~~l~~~~G~iv~ 290 (373)
T 2fzw_A 253 LIEMTD-GGVDYSFE-----CIGN------------VKVMRAALEACHKGWGVSVV 290 (373)
T ss_dssp HHHHTT-SCBSEEEE-----CSCC------------HHHHHHHHHTBCTTTCEEEE
T ss_pred HHHHhC-CCCCEEEE-----CCCc------------HHHHHHHHHhhccCCcEEEE
Confidence 444444 37999984 3332 12356788999999 99986
No 350
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=92.14 E-value=0.88 Score=40.83 Aligned_cols=80 Identities=18% Similarity=0.143 Sum_probs=52.2
Q ss_pred HcCCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCCCCCcEEEecCccChhhHHHHHhh
Q 021161 35 EFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRH 114 (316)
Q Consensus 35 ~f~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~i~gV~~i~gDIt~~~t~~~I~~~ 114 (316)
.|+.+.+.++||=.| |+|.....+++++.. .+.+|++++..+.....++.++.+|+++...+..+.+.
T Consensus 5 ~~~~~~~~~~vlVTG-atG~iG~~l~~~L~~-----------~G~~V~~~~r~~~~~~l~~~~~~~Dl~d~~~~~~~~~~ 72 (321)
T 2pk3_A 5 HHHHHHGSMRALITG-VAGFVGKYLANHLTE-----------QNVEVFGTSRNNEAKLPNVEMISLDIMDSQRVKKVISD 72 (321)
T ss_dssp --------CEEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEEESCTTCCCTTEEEEECCTTCHHHHHHHHHH
T ss_pred ccccccCcceEEEEC-CCChHHHHHHHHHHH-----------CCCEEEEEecCCccccceeeEEECCCCCHHHHHHHHHh
Confidence 345556777888665 679999999888741 24689999987643111788999999998766655432
Q ss_pred cCCccccEEEeCCCC
Q 021161 115 FDGCKADLVVCDGAP 129 (316)
Q Consensus 115 ~~~~~~DlVvsDgap 129 (316)
.++|.|+...+.
T Consensus 73 ---~~~d~vih~A~~ 84 (321)
T 2pk3_A 73 ---IKPDYIFHLAAK 84 (321)
T ss_dssp ---HCCSEEEECCSC
T ss_pred ---cCCCEEEEcCcc
Confidence 469999998754
No 351
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=92.08 E-value=0.34 Score=44.66 Aligned_cols=96 Identities=11% Similarity=0.112 Sum_probs=62.5
Q ss_pred cCCCCeEEEECCCCCHHHH-HHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----CCCCc-EEEecCccChhhHHHHH
Q 021161 39 FEGVKRVVDLCAAPGSWSQ-VLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGV-IQVQGDITNARTAEVVI 112 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq-~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----~i~gV-~~i~gDIt~~~t~~~I~ 112 (316)
+++|.+||=+|+|+++-.. .++++.. ..+|+++|.++.. .--|. ..+ |..+.+..+++.
T Consensus 161 ~~~g~~VlV~GaG~~g~~a~~~a~~~~-------------g~~Vi~~~~~~~r~~~~~~~Ga~~~i--~~~~~~~~~~v~ 225 (348)
T 4eez_A 161 VKPGDWQVIFGAGGLGNLAIQYAKNVF-------------GAKVIAVDINQDKLNLAKKIGADVTI--NSGDVNPVDEIK 225 (348)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTS-------------CCEEEEEESCHHHHHHHHHTTCSEEE--EC-CCCHHHHHH
T ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhC-------------CCEEEEEECcHHHhhhhhhcCCeEEE--eCCCCCHHHHhh
Confidence 3788999999998865443 3444443 4799999988742 11122 122 334444566677
Q ss_pred hhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEE
Q 021161 113 RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (316)
Q Consensus 113 ~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~K 166 (316)
+...+..+|.|+-+.. . ..++..+..+|++||++++-
T Consensus 226 ~~t~g~g~d~~~~~~~-----~------------~~~~~~~~~~l~~~G~~v~~ 262 (348)
T 4eez_A 226 KITGGLGVQSAIVCAV-----A------------RIAFEQAVASLKPMGKMVAV 262 (348)
T ss_dssp HHTTSSCEEEEEECCS-----C------------HHHHHHHHHTEEEEEEEEEC
T ss_pred hhcCCCCceEEEEecc-----C------------cchhheeheeecCCceEEEE
Confidence 7777778888886531 1 13467788999999999874
No 352
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=92.08 E-value=0.43 Score=44.14 Aligned_cols=90 Identities=23% Similarity=0.210 Sum_probs=54.5
Q ss_pred CCCeEEEECCCC-CHHHHHHHHHhCCCCCCCCCCCCCCCC-EEEEEeCCCC-----CCCCCcEEEecCccChhhHHHHHh
Q 021161 41 GVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLP-LIVAIDLQPM-----APIEGVIQVQGDITNARTAEVVIR 113 (316)
Q Consensus 41 ~~~rVLDLcagP-G~wSq~La~~l~~~~~~~~~~~~~~~~-~IvaVDl~~~-----~~i~gV~~i~gDIt~~~t~~~I~~ 113 (316)
++.+||-+|+|+ |.....+++.++ . +|+++|.++. ..+ --..+ |..+....+.+.+
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~G--------------a~~Vi~~~~~~~~~~~~~~l-a~~v~--~~~~~~~~~~~~~ 226 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASG--------------AGPILVSDPNPYRLAFARPY-ADRLV--NPLEEDLLEVVRR 226 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTT--------------CCSEEEECSCHHHHGGGTTT-CSEEE--CTTTSCHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcC--------------CCEEEEECCCHHHHHHHHHh-HHhcc--CcCccCHHHHHHH
Confidence 789999999843 333434455443 5 8999998752 122 11122 3333333444544
Q ss_pred hcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEE
Q 021161 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (316)
Q Consensus 114 ~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~ 165 (316)
.. +..+|+|+- ++|. ...+..+.++|++||+++.
T Consensus 227 ~~-~~g~D~vid-----~~g~------------~~~~~~~~~~l~~~G~iv~ 260 (343)
T 2dq4_A 227 VT-GSGVEVLLE-----FSGN------------EAAIHQGLMALIPGGEARI 260 (343)
T ss_dssp HH-SSCEEEEEE-----CSCC------------HHHHHHHHHHEEEEEEEEE
T ss_pred hc-CCCCCEEEE-----CCCC------------HHHHHHHHHHHhcCCEEEE
Confidence 44 567999994 3332 1235677889999999987
No 353
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=92.04 E-value=1.2 Score=38.07 Aligned_cols=73 Identities=16% Similarity=0.139 Sum_probs=52.3
Q ss_pred CCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCCCCCcEEEecCccChhhHHHHHhhcC-Cccc
Q 021161 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFD-GCKA 120 (316)
Q Consensus 42 ~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~i~gV~~i~gDIt~~~t~~~I~~~~~-~~~~ 120 (316)
+++||=.|+ +|+....+++++.. .+.+|+++|..+. ...+.++++|+++...+..+.+... ...+
T Consensus 2 ~k~vlVtGa-sggiG~~la~~l~~-----------~G~~V~~~~r~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 67 (242)
T 1uay_A 2 ERSALVTGG-ASGLGRAAALALKA-----------RGYRVVVLDLRRE--GEDLIYVEGDVTREEDVRRAVARAQEEAPL 67 (242)
T ss_dssp CCEEEEETT-TSHHHHHHHHHHHH-----------HTCEEEEEESSCC--SSSSEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred CCEEEEeCC-CChHHHHHHHHHHH-----------CCCEEEEEccCcc--ccceEEEeCCCCCHHHHHHHHHHHHhhCCc
Confidence 356777774 57888888887641 2468999998875 5667899999999887666554320 1368
Q ss_pred cEEEeCCC
Q 021161 121 DLVVCDGA 128 (316)
Q Consensus 121 DlVvsDga 128 (316)
|.|+...+
T Consensus 68 d~li~~ag 75 (242)
T 1uay_A 68 FAVVSAAG 75 (242)
T ss_dssp EEEEECCC
T ss_pred eEEEEccc
Confidence 99998864
No 354
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=92.01 E-value=0.58 Score=41.60 Aligned_cols=112 Identities=15% Similarity=0.098 Sum_probs=66.9
Q ss_pred CCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----------------------CCCCcEEEe
Q 021161 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------------------PIEGVIQVQ 99 (316)
Q Consensus 42 ~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----------------------~i~gV~~i~ 99 (316)
+++||=-|++ |++-..+++++.. .+.+|+.+|...-. .-..+.+++
T Consensus 10 gk~vlVTGas-~gIG~~ia~~l~~-----------~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (287)
T 3pxx_A 10 DKVVLVTGGA-RGQGRSHAVKLAE-----------EGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAE 77 (287)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHH-----------TTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEE
T ss_pred CCEEEEeCCC-ChHHHHHHHHHHH-----------CCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEE
Confidence 5677777755 6678888877742 35789999987210 013578899
Q ss_pred cCccChhhHHHHHhhcC--CccccEEEeCCCCCCCCCC-CccH---HHHHHHH--HHHHHHHHHcccCCcEEEE
Q 021161 100 GDITNARTAEVVIRHFD--GCKADLVVCDGAPDVTGLH-DMDE---FVQSQLI--LAGLTVVTHVLKEGGKFIA 165 (316)
Q Consensus 100 gDIt~~~t~~~I~~~~~--~~~~DlVvsDgapdvtG~~-~~de---~~~~~L~--~aaL~~a~~vLkpGG~fV~ 165 (316)
+|+++...++.+.+... .+++|+||.+.+....+.. +.++ .++..+. ...++.+...|+.+|++|.
T Consensus 78 ~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~ 151 (287)
T 3pxx_A 78 VDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIIT 151 (287)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEE
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEE
Confidence 99999887655443221 1379999999754322221 1222 1222221 2334555666778898876
No 355
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=91.77 E-value=1.3 Score=40.31 Aligned_cols=70 Identities=19% Similarity=0.212 Sum_probs=51.9
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCCCCCcEEEecCccChhhHHHHHhhcCCccc
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKA 120 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~i~gV~~i~gDIt~~~t~~~I~~~~~~~~~ 120 (316)
++++||=.| |+|..-..+++.+.. .+.+|++++..+-. .++.++++|+++...+..++ . .+
T Consensus 18 ~~~~vlVtG-atG~iG~~l~~~L~~-----------~G~~V~~~~r~~~~--~~~~~~~~Dl~d~~~~~~~~---~--~~ 78 (347)
T 4id9_A 18 GSHMILVTG-SAGRVGRAVVAALRT-----------QGRTVRGFDLRPSG--TGGEEVVGSLEDGQALSDAI---M--GV 78 (347)
T ss_dssp ---CEEEET-TTSHHHHHHHHHHHH-----------TTCCEEEEESSCCS--SCCSEEESCTTCHHHHHHHH---T--TC
T ss_pred CCCEEEEEC-CCChHHHHHHHHHHh-----------CCCEEEEEeCCCCC--CCccEEecCcCCHHHHHHHH---h--CC
Confidence 457888777 678899999888741 24689999988754 68899999999987665543 2 69
Q ss_pred cEEEeCCCC
Q 021161 121 DLVVCDGAP 129 (316)
Q Consensus 121 DlVvsDgap 129 (316)
|.|+..+++
T Consensus 79 d~vih~A~~ 87 (347)
T 4id9_A 79 SAVLHLGAF 87 (347)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCcc
Confidence 999987654
No 356
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=91.77 E-value=1.1 Score=39.28 Aligned_cols=111 Identities=17% Similarity=0.206 Sum_probs=66.0
Q ss_pred CCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCCCCCcEEEecCccChhhHHHHHhhc--CCcc
Q 021161 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHF--DGCK 119 (316)
Q Consensus 42 ~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~i~gV~~i~gDIt~~~t~~~I~~~~--~~~~ 119 (316)
+++||=.|++ |+.-..+++++.. .+.+|+++|.++.... -..+..|+++...++.+.+.. ..++
T Consensus 22 ~k~vlITGas-~gIG~~la~~l~~-----------~G~~V~~~~r~~~~~~--~~~~~~d~~d~~~v~~~~~~~~~~~g~ 87 (251)
T 3orf_A 22 SKNILVLGGS-GALGAEVVKFFKS-----------KSWNTISIDFRENPNA--DHSFTIKDSGEEEIKSVIEKINSKSIK 87 (251)
T ss_dssp CCEEEEETTT-SHHHHHHHHHHHH-----------TTCEEEEEESSCCTTS--SEEEECSCSSHHHHHHHHHHHHTTTCC
T ss_pred CCEEEEECCC-CHHHHHHHHHHHH-----------CCCEEEEEeCCccccc--ccceEEEeCCHHHHHHHHHHHHHHcCC
Confidence 4677777765 6788888887742 3578999998875422 235677899987766655443 1247
Q ss_pred ccEEEeCCCCCCCC--CCCcc-----HHHHHHHH--HHHHHHHHHcccCCcEEEEE
Q 021161 120 ADLVVCDGAPDVTG--LHDMD-----EFVQSQLI--LAGLTVVTHVLKEGGKFIAK 166 (316)
Q Consensus 120 ~DlVvsDgapdvtG--~~~~d-----e~~~~~L~--~aaL~~a~~vLkpGG~fV~K 166 (316)
+|+||.+.+....+ ..+.+ ..+...+. ...+..+...++.+|++|.-
T Consensus 88 iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 143 (251)
T 3orf_A 88 VDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLT 143 (251)
T ss_dssp EEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEE
Confidence 99999987532211 11211 11111111 23345555667778888863
No 357
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=91.77 E-value=2 Score=39.04 Aligned_cols=74 Identities=20% Similarity=0.171 Sum_probs=53.3
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC------CCCCcEEEecCccChhhHHHHHhh
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIRH 114 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~------~i~gV~~i~gDIt~~~t~~~I~~~ 114 (316)
.+++||=.| |+|.....+++++.. .+.+|++++..+.. .+.++.++++|+++...+..+.+.
T Consensus 20 ~~~~vlVTG-atG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~ 87 (333)
T 2q1w_A 20 HMKKVFITG-ICGQIGSHIAELLLE-----------RGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGD 87 (333)
T ss_dssp -CCEEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeC-CccHHHHHHHHHHHH-----------CCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhc
Confidence 356888777 578899998887741 24689999986532 125889999999998766555432
Q ss_pred cCCccccEEEeCCCC
Q 021161 115 FDGCKADLVVCDGAP 129 (316)
Q Consensus 115 ~~~~~~DlVvsDgap 129 (316)
..+|+|+...+.
T Consensus 88 ---~~~D~vih~A~~ 99 (333)
T 2q1w_A 88 ---LQPDAVVHTAAS 99 (333)
T ss_dssp ---HCCSEEEECCCC
T ss_pred ---cCCcEEEECcee
Confidence 369999998764
No 358
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=91.67 E-value=1 Score=39.39 Aligned_cols=76 Identities=12% Similarity=-0.063 Sum_probs=52.7
Q ss_pred CCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCCCCCcEEEecCccChhhHHHHHhhcC--Ccc
Q 021161 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFD--GCK 119 (316)
Q Consensus 42 ~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~i~gV~~i~gDIt~~~t~~~I~~~~~--~~~ 119 (316)
+++||=.|+ .|+.-..+++++.. .+.+|++++.++...-.++..+++|+++.+.++.+.+... .+.
T Consensus 7 ~k~vlVTGa-s~giG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~ 74 (250)
T 2fwm_X 7 GKNVWVTGA-GKGIGYATALAFVE-----------AGAKVTGFDQAFTQEQYPFATEVMDVADAAQVAQVCQRLLAETER 74 (250)
T ss_dssp TCEEEEEST-TSHHHHHHHHHHHH-----------TTCEEEEEESCCCSSCCSSEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred CCEEEEeCC-CcHHHHHHHHHHHH-----------CCCEEEEEeCchhhhcCCceEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 567777775 57788888887742 3478999998764322358889999999876655543221 137
Q ss_pred ccEEEeCCCC
Q 021161 120 ADLVVCDGAP 129 (316)
Q Consensus 120 ~DlVvsDgap 129 (316)
+|+|+.+.+.
T Consensus 75 id~lv~~Ag~ 84 (250)
T 2fwm_X 75 LDALVNAAGI 84 (250)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCc
Confidence 9999998653
No 359
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=91.65 E-value=2 Score=37.73 Aligned_cols=115 Identities=14% Similarity=0.085 Sum_probs=68.4
Q ss_pred CCCeEEEECCCCC-HHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC---------CC--CCcEEEecCccChhhH
Q 021161 41 GVKRVVDLCAAPG-SWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PI--EGVIQVQGDITNARTA 108 (316)
Q Consensus 41 ~~~rVLDLcagPG-~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~---------~i--~gV~~i~gDIt~~~t~ 108 (316)
.+++||=.|++.| |.-..+++++.. .+.+|+.++.+... .. ..+.++++|+++...+
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v 74 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHE-----------AGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEI 74 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHH-----------TTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHH-----------CCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHH
Confidence 4578888888743 466677776631 34789999877521 11 2588999999998876
Q ss_pred HHHHhhcCC--ccccEEEeCCCCCC-----CCCCCcc--HHH---HHHH--HHHHHHHHHHcccCCcEEEEE
Q 021161 109 EVVIRHFDG--CKADLVVCDGAPDV-----TGLHDMD--EFV---QSQL--ILAGLTVVTHVLKEGGKFIAK 166 (316)
Q Consensus 109 ~~I~~~~~~--~~~DlVvsDgapdv-----tG~~~~d--e~~---~~~L--~~aaL~~a~~vLkpGG~fV~K 166 (316)
+.+.+.... +++|+|+.+.+... ....+.+ ++. ...+ ....+..+...++++|++|.-
T Consensus 75 ~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~i 146 (266)
T 3oig_A 75 ETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTL 146 (266)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEE
T ss_pred HHHHHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEE
Confidence 655443211 37999999865322 1122222 111 1111 123345556677888998864
No 360
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=91.62 E-value=1 Score=40.78 Aligned_cols=115 Identities=14% Similarity=0.102 Sum_probs=70.0
Q ss_pred CCCeEEEECCCC-CHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC---------CCCCcEEEecCccChhhHHH
Q 021161 41 GVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAEV 110 (316)
Q Consensus 41 ~~~rVLDLcagP-G~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~---------~i~gV~~i~gDIt~~~t~~~ 110 (316)
.+++||=.|++. ++.-..+++++.. .+.+|+.+|.++.. ...++.++++|+++...++.
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~ 97 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCA-----------QGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDN 97 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHH-----------TTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHH-----------CCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHH
Confidence 357888888864 4677778777641 35789999988631 12457889999999887665
Q ss_pred HHhhcC--CccccEEEeCCCCCC-----CCCCCcc--HH---HHHHHH--HHHHHHHHHcccCCcEEEEE
Q 021161 111 VIRHFD--GCKADLVVCDGAPDV-----TGLHDMD--EF---VQSQLI--LAGLTVVTHVLKEGGKFIAK 166 (316)
Q Consensus 111 I~~~~~--~~~~DlVvsDgapdv-----tG~~~~d--e~---~~~~L~--~aaL~~a~~vLkpGG~fV~K 166 (316)
+.+... -+++|++|.+.+... ....+.+ ++ +...+. ...+..+...++.+|++|.-
T Consensus 98 ~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~i 167 (296)
T 3k31_A 98 MFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTL 167 (296)
T ss_dssp HHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEE
T ss_pred HHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEE
Confidence 554321 137999999875321 1122222 11 111111 23344555667778988863
No 361
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=91.51 E-value=0.36 Score=41.92 Aligned_cols=75 Identities=16% Similarity=0.254 Sum_probs=51.2
Q ss_pred CCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCCCCCcEEEecCccChhhHHHHHh----hcCC
Q 021161 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIR----HFDG 117 (316)
Q Consensus 42 ~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~i~gV~~i~gDIt~~~t~~~I~~----~~~~ 117 (316)
+++||=.| |.|+.-..+++++.. .+.+|+.+|.++......+..+++|+++.+..+.+.+ .+..
T Consensus 3 ~k~vlITG-as~gIG~~~a~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 70 (236)
T 1ooe_A 3 SGKVIVYG-GKGALGSAILEFFKK-----------NGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQTASSLQG 70 (236)
T ss_dssp CEEEEEET-TTSHHHHHHHHHHHH-----------TTEEEEEEESSCCTTSSEEEECCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEEC-CCcHHHHHHHHHHHH-----------CCCEEEEEecCccccccccEEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 34566666 557788888887742 2468999998875433346678899999876554443 3322
Q ss_pred ccccEEEeCCC
Q 021161 118 CKADLVVCDGA 128 (316)
Q Consensus 118 ~~~DlVvsDga 128 (316)
+.+|+||.+.+
T Consensus 71 g~id~lv~~Ag 81 (236)
T 1ooe_A 71 SQVDGVFCVAG 81 (236)
T ss_dssp CCEEEEEECCC
T ss_pred CCCCEEEECCc
Confidence 47999999875
No 362
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=91.38 E-value=1.7 Score=38.70 Aligned_cols=77 Identities=12% Similarity=0.075 Sum_probs=53.2
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCCCCCcEEEecCccChhhHHHHHhhcC--Cc
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFD--GC 118 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~i~gV~~i~gDIt~~~t~~~I~~~~~--~~ 118 (316)
.+++||=.|+ .|++-..+++++.. .+.+|+.+|..+......+..+++|+++.+.++.+.+... .+
T Consensus 13 ~~k~vlVTGa-s~GIG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 80 (269)
T 3vtz_A 13 TDKVAIVTGG-SSGIGLAVVDALVR-----------YGAKVVSVSLDEKSDVNVSDHFKIDVTNEEEVKEAVEKTTKKYG 80 (269)
T ss_dssp TTCEEEESST-TSHHHHHHHHHHHH-----------TTCEEEEEESCC--CTTSSEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCC-CCHHHHHHHHHHHH-----------CCCEEEEEeCCchhccCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4677776665 56788888887742 3578999998876544567889999999886665544321 13
Q ss_pred cccEEEeCCCC
Q 021161 119 KADLVVCDGAP 129 (316)
Q Consensus 119 ~~DlVvsDgap 129 (316)
++|+||.+.+.
T Consensus 81 ~iD~lv~nAg~ 91 (269)
T 3vtz_A 81 RIDILVNNAGI 91 (269)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 79999998753
No 363
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=91.25 E-value=0.28 Score=42.91 Aligned_cols=114 Identities=11% Similarity=-0.004 Sum_probs=66.0
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC------C----CCCcEEEecCccChhhHHH
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------P----IEGVIQVQGDITNARTAEV 110 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~------~----i~gV~~i~gDIt~~~t~~~ 110 (316)
.+++||=.| |.|+.-..+++++.. ..+.+|+.++.++.. . -..+.++++|+++...++.
T Consensus 3 ~~k~vlITG-asggIG~~~a~~L~~----------~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~ 71 (276)
T 1wma_A 3 GIHVALVTG-GNKGIGLAIVRDLCR----------LFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRA 71 (276)
T ss_dssp CCCEEEESS-CSSHHHHHHHHHHHH----------HSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHH----------hcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHH
Confidence 345666555 678899998888741 024689999887521 0 1357889999999876665
Q ss_pred HHhhcC--CccccEEEeCCCCCCCCCCCcc--H----HHHHHHH--HHHHHHHHHcccCCcEEEE
Q 021161 111 VIRHFD--GCKADLVVCDGAPDVTGLHDMD--E----FVQSQLI--LAGLTVVTHVLKEGGKFIA 165 (316)
Q Consensus 111 I~~~~~--~~~~DlVvsDgapdvtG~~~~d--e----~~~~~L~--~aaL~~a~~vLkpGG~fV~ 165 (316)
+.+.+. .+.+|+||...+....+..... + .+...+. ...+..+...++++|++|.
T Consensus 72 ~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~ 136 (276)
T 1wma_A 72 LRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVN 136 (276)
T ss_dssp HHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEE
T ss_pred HHHHHHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEE
Confidence 544321 1369999998653322222111 1 1111111 2234445556666787775
No 364
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=91.24 E-value=0.23 Score=46.16 Aligned_cols=93 Identities=15% Similarity=0.105 Sum_probs=56.0
Q ss_pred CCCeEEEECCCC-CHHHHHHHHHhCCCCCCCCCCCCCCCC-EEEEEeCCCCC----CCCCcEEEecCccChhhHHHHHhh
Q 021161 41 GVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLP-LIVAIDLQPMA----PIEGVIQVQGDITNARTAEVVIRH 114 (316)
Q Consensus 41 ~~~rVLDLcagP-G~wSq~La~~l~~~~~~~~~~~~~~~~-~IvaVDl~~~~----~i~gV~~i~gDIt~~~t~~~I~~~ 114 (316)
++.+||-+|+|+ |.....+++.. +. +|+++|.++.. .--|...+ -|..+....+.+.+.
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~--------------Ga~~Vi~~~~~~~~~~~~~~~Ga~~~-~~~~~~~~~~~v~~~ 231 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKAS--------------GAYPVIVSEPSDFRRELAKKVGADYV-INPFEEDVVKEVMDI 231 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHT--------------TCCSEEEECSCHHHHHHHHHHTCSEE-ECTTTSCHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc--------------CCCEEEEECCCHHHHHHHHHhCCCEE-ECCCCcCHHHHHHHH
Confidence 789999999843 33333344443 25 89999987632 01133211 133334444556555
Q ss_pred cCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEE
Q 021161 115 FDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (316)
Q Consensus 115 ~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~ 165 (316)
..+..+|+|+.. +|. ...+..+.++|++||+++.
T Consensus 232 ~~g~g~D~vid~-----~g~------------~~~~~~~~~~l~~~G~iv~ 265 (348)
T 2d8a_A 232 TDGNGVDVFLEF-----SGA------------PKALEQGLQAVTPAGRVSL 265 (348)
T ss_dssp TTTSCEEEEEEC-----SCC------------HHHHHHHHHHEEEEEEEEE
T ss_pred cCCCCCCEEEEC-----CCC------------HHHHHHHHHHHhcCCEEEE
Confidence 555679999953 332 1235677889999999986
No 365
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=91.23 E-value=0.4 Score=45.61 Aligned_cols=102 Identities=17% Similarity=0.081 Sum_probs=58.0
Q ss_pred cCCCCeEEEECCCC-CHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----CCCCcEEEecCccChhhHHHHHh
Q 021161 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNARTAEVVIR 113 (316)
Q Consensus 39 ~~~~~rVLDLcagP-G~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----~i~gV~~i~gDIt~~~t~~~I~~ 113 (316)
+++|.+||=+|+|+ |.+...+++.++ ..+|+++|.++.. .--|...+ -|..+....+.+.+
T Consensus 211 ~~~g~~VlV~GaG~vG~~aiqlak~~G-------------a~~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~i~~ 276 (404)
T 3ip1_A 211 IRPGDNVVILGGGPIGLAAVAILKHAG-------------ASKVILSEPSEVRRNLAKELGADHV-IDPTKENFVEAVLD 276 (404)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT-------------CSEEEEECSCHHHHHHHHHHTCSEE-ECTTTSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-------------CCEEEEECCCHHHHHHHHHcCCCEE-EcCCCCCHHHHHHH
Confidence 46889999999754 444444555543 2389999988732 01132211 13334445556666
Q ss_pred hcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEE
Q 021161 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (316)
Q Consensus 114 ~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~K 166 (316)
...+..+|+|+- ++|.. . .....++....+.+++||++++-
T Consensus 277 ~t~g~g~D~vid-----~~g~~--~-----~~~~~~~~~l~~~~~~~G~iv~~ 317 (404)
T 3ip1_A 277 YTNGLGAKLFLE-----ATGVP--Q-----LVWPQIEEVIWRARGINATVAIV 317 (404)
T ss_dssp HTTTCCCSEEEE-----CSSCH--H-----HHHHHHHHHHHHCSCCCCEEEEC
T ss_pred HhCCCCCCEEEE-----CCCCc--H-----HHHHHHHHHHHhccCCCcEEEEe
Confidence 666678999994 34331 0 01112223334566999999973
No 366
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=91.19 E-value=0.16 Score=47.45 Aligned_cols=65 Identities=15% Similarity=0.125 Sum_probs=42.9
Q ss_pred cEEE-ecCccChhhHHHHHhhcCCccccEEEeCCCCCCCCCCC---ccHHHHHHHHHHHHHHHHHcccCCcEEEEEEc
Q 021161 95 VIQV-QGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHD---MDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (316)
Q Consensus 95 V~~i-~gDIt~~~t~~~I~~~~~~~~~DlVvsDgapdvtG~~~---~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif 168 (316)
...+ +||..+ +++.+.++++|+|++|.+-. ++..+ .+++. ..+...|..+.++|+|||.+++.+-
T Consensus 39 ~~l~i~gD~l~------~L~~l~~~svDlI~tDPPY~-~~~d~~~~~~~~~--~~~~~~l~~~~rvLk~~G~i~i~~~ 107 (319)
T 1eg2_A 39 RHVYDVCDCLD------TLAKLPDDSVQLIICDPPYN-IMLADWDDHMDYI--GWAKRWLAEAERVLSPTGSIAIFGG 107 (319)
T ss_dssp EEEEEECCHHH------HHHTSCTTCEEEEEECCCSB-CCGGGGGTCSSHH--HHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ceEEECCcHHH------HHHhCccCCcCEEEECCCCC-CCCCCccCHHHHH--HHHHHHHHHHHHHcCCCeEEEEEcC
Confidence 3456 899765 23456677999999997543 33111 22332 2345667788999999999998764
No 367
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=91.17 E-value=1.8 Score=36.07 Aligned_cols=64 Identities=17% Similarity=0.243 Sum_probs=49.3
Q ss_pred CeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCCCCCcEEEecCccChhhHHHHHhhcCCccccE
Q 021161 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKADL 122 (316)
Q Consensus 43 ~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~i~gV~~i~gDIt~~~t~~~I~~~~~~~~~Dl 122 (316)
++||=.|+ .|+.-..+++++. .+.+|++++..+. .+++|+++...++.+.+.+ +++|.
T Consensus 4 M~vlVtGa-sg~iG~~~~~~l~------------~g~~V~~~~r~~~-------~~~~D~~~~~~~~~~~~~~--~~~d~ 61 (202)
T 3d7l_A 4 MKILLIGA-SGTLGSAVKERLE------------KKAEVITAGRHSG-------DVTVDITNIDSIKKMYEQV--GKVDA 61 (202)
T ss_dssp CEEEEETT-TSHHHHHHHHHHT------------TTSEEEEEESSSS-------SEECCTTCHHHHHHHHHHH--CCEEE
T ss_pred cEEEEEcC-CcHHHHHHHHHHH------------CCCeEEEEecCcc-------ceeeecCCHHHHHHHHHHh--CCCCE
Confidence 47887775 6888999998874 2478999987754 4678999988777776655 47999
Q ss_pred EEeCCC
Q 021161 123 VVCDGA 128 (316)
Q Consensus 123 VvsDga 128 (316)
|+...+
T Consensus 62 vi~~ag 67 (202)
T 3d7l_A 62 IVSATG 67 (202)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 999865
No 368
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=91.14 E-value=0.38 Score=44.49 Aligned_cols=93 Identities=12% Similarity=0.056 Sum_probs=56.5
Q ss_pred cCCCCeEEEECCCC-CHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----CCCCcEEEecCccChhhHHHHHh
Q 021161 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNARTAEVVIR 113 (316)
Q Consensus 39 ~~~~~rVLDLcagP-G~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----~i~gV~~i~gDIt~~~t~~~I~~ 113 (316)
++++.+||-.|+|+ |.....+++.. +.+|+++|.++.. .--|...+ -|.++.+..+.+.+
T Consensus 162 ~~~g~~VlV~GaG~vG~~~~~~a~~~--------------Ga~Vi~~~~~~~~~~~~~~lGa~~~-~d~~~~~~~~~~~~ 226 (339)
T 1rjw_A 162 AKPGEWVAIYGIGGLGHVAVQYAKAM--------------GLNVVAVDIGDEKLELAKELGADLV-VNPLKEDAAKFMKE 226 (339)
T ss_dssp CCTTCEEEEECCSTTHHHHHHHHHHT--------------TCEEEEECSCHHHHHHHHHTTCSEE-ECTTTSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc--------------CCEEEEEeCCHHHHHHHHHCCCCEE-ecCCCccHHHHHHH
Confidence 46889999999954 33444444444 3699999987631 11233221 24444444444544
Q ss_pred hcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEE
Q 021161 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (316)
Q Consensus 114 ~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~ 165 (316)
.. ..+|+|+.. .|. ...+..+.++|++||+++.
T Consensus 227 ~~--~~~d~vid~-----~g~------------~~~~~~~~~~l~~~G~~v~ 259 (339)
T 1rjw_A 227 KV--GGVHAAVVT-----AVS------------KPAFQSAYNSIRRGGACVL 259 (339)
T ss_dssp HH--SSEEEEEES-----SCC------------HHHHHHHHHHEEEEEEEEE
T ss_pred Hh--CCCCEEEEC-----CCC------------HHHHHHHHHHhhcCCEEEE
Confidence 43 369999853 332 1235677889999999986
No 369
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=90.93 E-value=0.39 Score=44.43 Aligned_cols=94 Identities=17% Similarity=0.076 Sum_probs=58.1
Q ss_pred cCCCCeEEEECC--CCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----CCCCcEEEecCccChhhHHHHH
Q 021161 39 FEGVKRVVDLCA--APGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNARTAEVVI 112 (316)
Q Consensus 39 ~~~~~rVLDLca--gPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----~i~gV~~i~gDIt~~~t~~~I~ 112 (316)
++++.+||-.|+ |-|.....+++.. +.+|+++|.++.. .--|...+ -|.++....+.+.
T Consensus 164 ~~~g~~vlV~Gasg~iG~~~~~~a~~~--------------G~~Vi~~~~~~~~~~~~~~~ga~~~-~d~~~~~~~~~~~ 228 (343)
T 2eih_A 164 VRPGDDVLVMAAGSGVSVAAIQIAKLF--------------GARVIATAGSEDKLRRAKALGADET-VNYTHPDWPKEVR 228 (343)
T ss_dssp CCTTCEEEECSTTSTTHHHHHHHHHHT--------------TCEEEEEESSHHHHHHHHHHTCSEE-EETTSTTHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHC--------------CCEEEEEeCCHHHHHHHHhcCCCEE-EcCCcccHHHHHH
Confidence 467899999998 3444444455544 3689999987531 00132211 2555544445555
Q ss_pred hhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEE
Q 021161 113 RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (316)
Q Consensus 113 ~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~ 165 (316)
+...+..+|+|+... | .. .+..+.++|++||+++.
T Consensus 229 ~~~~~~~~d~vi~~~-----g-~~------------~~~~~~~~l~~~G~~v~ 263 (343)
T 2eih_A 229 RLTGGKGADKVVDHT-----G-AL------------YFEGVIKATANGGRIAI 263 (343)
T ss_dssp HHTTTTCEEEEEESS-----C-SS------------SHHHHHHHEEEEEEEEE
T ss_pred HHhCCCCceEEEECC-----C-HH------------HHHHHHHhhccCCEEEE
Confidence 555556899999653 3 11 14567789999999986
No 370
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=90.88 E-value=0.49 Score=42.44 Aligned_cols=78 Identities=13% Similarity=0.049 Sum_probs=54.2
Q ss_pred CCCeEEEECCCC-CHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC---------CCCCcEEEecCccChhhHHH
Q 021161 41 GVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAEV 110 (316)
Q Consensus 41 ~~~rVLDLcagP-G~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~---------~i~gV~~i~gDIt~~~t~~~ 110 (316)
.+++||=.|++. |+.-..+++++.. .+.+|+.++.++.. ...++.++++|+++...++.
T Consensus 20 ~~k~vlVTGas~~~gIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~ 88 (285)
T 2p91_A 20 EGKRALITGVANERSIAYGIAKSFHR-----------EGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKN 88 (285)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHH-----------TTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHH-----------cCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHH
Confidence 356888888864 8888888888742 34789999887620 12347789999999876655
Q ss_pred HHhhcC--CccccEEEeCCCC
Q 021161 111 VIRHFD--GCKADLVVCDGAP 129 (316)
Q Consensus 111 I~~~~~--~~~~DlVvsDgap 129 (316)
+.+.+. -+++|+||.+.+.
T Consensus 89 ~~~~~~~~~g~iD~lv~~Ag~ 109 (285)
T 2p91_A 89 LKKFLEENWGSLDIIVHSIAY 109 (285)
T ss_dssp HHHHHHHHTSCCCEEEECCCC
T ss_pred HHHHHHHHcCCCCEEEECCCC
Confidence 544321 1479999998753
No 371
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=90.80 E-value=2.1 Score=37.77 Aligned_cols=70 Identities=24% Similarity=0.310 Sum_probs=52.3
Q ss_pred CeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCC-CCCcEEEecCccChhhHHHHHhhcCCcccc
Q 021161 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-IEGVIQVQGDITNARTAEVVIRHFDGCKAD 121 (316)
Q Consensus 43 ~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~-i~gV~~i~gDIt~~~t~~~I~~~~~~~~~D 121 (316)
++||=.| |+|+.-..+++++.. .+.+|+++|.++... -.++.++++|+++...+..+.+ .+|
T Consensus 4 k~vlVTG-asg~IG~~la~~L~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----~~D 66 (267)
T 3rft_A 4 KRLLVTG-AAGQLGRVMRERLAP-----------MAEILRLADLSPLDPAGPNEECVQCDLADANAVNAMVA-----GCD 66 (267)
T ss_dssp EEEEEES-TTSHHHHHHHHHTGG-----------GEEEEEEEESSCCCCCCTTEEEEECCTTCHHHHHHHHT-----TCS
T ss_pred CEEEEEC-CCCHHHHHHHHHHHh-----------cCCEEEEEecCCccccCCCCEEEEcCCCCHHHHHHHHc-----CCC
Confidence 3455555 568899999998852 246899999988643 3578999999999887665543 689
Q ss_pred EEEeCCCC
Q 021161 122 LVVCDGAP 129 (316)
Q Consensus 122 lVvsDgap 129 (316)
+||..++.
T Consensus 67 ~vi~~Ag~ 74 (267)
T 3rft_A 67 GIVHLGGI 74 (267)
T ss_dssp EEEECCSC
T ss_pred EEEECCCC
Confidence 99998765
No 372
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=90.79 E-value=1.2 Score=40.28 Aligned_cols=111 Identities=14% Similarity=0.171 Sum_probs=67.6
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCCcEEEecCccChhhHH
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTAE 109 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~gV~~i~gDIt~~~t~~ 109 (316)
.+++||=.|++ |+.-..+++++.. .+.+|+.+|..... .-..+.++++|+++....+
T Consensus 46 ~gk~vlVTGas-~GIG~aia~~la~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~ 113 (291)
T 3ijr_A 46 KGKNVLITGGD-SGIGRAVSIAFAK-----------EGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCK 113 (291)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH-----------TTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHH-----------CCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHH
Confidence 35678877754 6678888887742 35789999887631 1135788999999987655
Q ss_pred HHHh----hcCCccccEEEeCCCCCC--CCCCCcc--HH---HHHHHH--HHHHHHHHHcccCCcEEEE
Q 021161 110 VVIR----HFDGCKADLVVCDGAPDV--TGLHDMD--EF---VQSQLI--LAGLTVVTHVLKEGGKFIA 165 (316)
Q Consensus 110 ~I~~----~~~~~~~DlVvsDgapdv--tG~~~~d--e~---~~~~L~--~aaL~~a~~vLkpGG~fV~ 165 (316)
.+.+ .+ +.+|+||.+.+... ..+.+.+ ++ +...+. ...++.+...++.+|++|.
T Consensus 114 ~~~~~~~~~~--g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~ 180 (291)
T 3ijr_A 114 DIVQETVRQL--GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIIN 180 (291)
T ss_dssp HHHHHHHHHH--SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEE
T ss_pred HHHHHHHHHc--CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEE
Confidence 5443 33 37999999864321 1122222 11 111111 2334555667788898776
No 373
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=90.60 E-value=0.99 Score=40.83 Aligned_cols=115 Identities=15% Similarity=0.095 Sum_probs=69.3
Q ss_pred CCCeEEEECCCCC-HHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC---------CCCCcEEEecCccChhhHHH
Q 021161 41 GVKRVVDLCAAPG-SWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAEV 110 (316)
Q Consensus 41 ~~~rVLDLcagPG-~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~---------~i~gV~~i~gDIt~~~t~~~ 110 (316)
.+++||=.|++.| |+-..+++++.. .+.+|+.++..+.. ....+.++++|+++.+.++.
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~ 98 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAARE-----------AGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDA 98 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHH-----------TTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHH-----------CCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHH
Confidence 4578898898754 567777776641 34789999887421 12467889999999887665
Q ss_pred HHhhcC--CccccEEEeCCCCCC-----CCCCCccH--H---HHHHHH--HHHHHHHHHcccCCcEEEEE
Q 021161 111 VIRHFD--GCKADLVVCDGAPDV-----TGLHDMDE--F---VQSQLI--LAGLTVVTHVLKEGGKFIAK 166 (316)
Q Consensus 111 I~~~~~--~~~~DlVvsDgapdv-----tG~~~~de--~---~~~~L~--~aaL~~a~~vLkpGG~fV~K 166 (316)
+.+... -+++|++|.+.+... ....+.+. + +...+. ...+..+...++.+|++|.-
T Consensus 99 ~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~i 168 (293)
T 3grk_A 99 VFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTL 168 (293)
T ss_dssp HHHHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEE
Confidence 554321 137999999865321 11222221 1 111111 23344555667778988863
No 374
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=90.59 E-value=1.5 Score=39.81 Aligned_cols=76 Identities=16% Similarity=0.138 Sum_probs=53.8
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCC----------CCCcEEEecCccChhhHHH
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----------IEGVIQVQGDITNARTAEV 110 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~----------i~gV~~i~gDIt~~~t~~~ 110 (316)
.+++||=.| |+|.....+++.+.. .+...+|+++|...... .+++.++++|+++...+..
T Consensus 23 ~~~~vlVtG-atG~iG~~l~~~L~~---------~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~ 92 (346)
T 4egb_A 23 NAMNILVTG-GAGFIGSNFVHYMLQ---------SYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEH 92 (346)
T ss_dssp -CEEEEEET-TTSHHHHHHHHHHHH---------HCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHH
T ss_pred CCCeEEEEC-CccHHHHHHHHHHHh---------hCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHH
Confidence 456888776 678888888887631 11247899999875321 2589999999999887666
Q ss_pred HHhhcCCccccEEEeCCCC
Q 021161 111 VIRHFDGCKADLVVCDGAP 129 (316)
Q Consensus 111 I~~~~~~~~~DlVvsDgap 129 (316)
+.+. ..+|+|+..++.
T Consensus 93 ~~~~---~~~d~Vih~A~~ 108 (346)
T 4egb_A 93 VIKE---RDVQVIVNFAAE 108 (346)
T ss_dssp HHHH---HTCCEEEECCCC
T ss_pred HHhh---cCCCEEEECCcc
Confidence 5442 359999988754
No 375
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=90.54 E-value=1.2 Score=40.08 Aligned_cols=75 Identities=11% Similarity=0.024 Sum_probs=52.7
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----------CCCCcEEEecCccChhhHH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTAE 109 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----------~i~gV~~i~gDIt~~~t~~ 109 (316)
.++++||=.| |+|.....+++.+.. .+.+|++++..+.. ...++.++++|+++...+.
T Consensus 12 ~~~~~vlVTG-atG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~ 79 (335)
T 1rpn_A 12 SMTRSALVTG-ITGQDGAYLAKLLLE-----------KGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQ 79 (335)
T ss_dssp ---CEEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHH
T ss_pred ccCCeEEEEC-CCChHHHHHHHHHHH-----------CCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHH
Confidence 4678898777 578899999887741 24689999987642 1246889999999987666
Q ss_pred HHHhhcCCccccEEEeCCCC
Q 021161 110 VVIRHFDGCKADLVVCDGAP 129 (316)
Q Consensus 110 ~I~~~~~~~~~DlVvsDgap 129 (316)
.+++. ..+|.|+..++.
T Consensus 80 ~~~~~---~~~d~Vih~A~~ 96 (335)
T 1rpn_A 80 RAVIK---AQPQEVYNLAAQ 96 (335)
T ss_dssp HHHHH---HCCSEEEECCSC
T ss_pred HHHHH---cCCCEEEECccc
Confidence 55432 258999987653
No 376
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=90.52 E-value=0.6 Score=43.21 Aligned_cols=94 Identities=19% Similarity=0.090 Sum_probs=55.8
Q ss_pred cCCCCeEEEECCC--CCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCC----CCCcEEEecCccC-hhhHHHH
Q 021161 39 FEGVKRVVDLCAA--PGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITN-ARTAEVV 111 (316)
Q Consensus 39 ~~~~~rVLDLcag--PG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~----i~gV~~i~gDIt~-~~t~~~I 111 (316)
++++.+||-.|++ -|.....+++.. +.+|+++|.++... --|.... .|.++ ....+.+
T Consensus 167 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~--------------Ga~V~~~~~~~~~~~~~~~~g~~~~-~d~~~~~~~~~~~ 231 (347)
T 2hcy_A 167 LMAGHWVAISGAAGGLGSLAVQYAKAM--------------GYRVLGIDGGEGKEELFRSIGGEVF-IDFTKEKDIVGAV 231 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT--------------TCEEEEEECSTTHHHHHHHTTCCEE-EETTTCSCHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHC--------------CCcEEEEcCCHHHHHHHHHcCCceE-EecCccHhHHHHH
Confidence 4688999999973 333333333333 36899999876421 1133221 25552 2333344
Q ss_pred HhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEE
Q 021161 112 IRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (316)
Q Consensus 112 ~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~ 165 (316)
.+...+ .+|+|+... |. ...+..+.++|++||+++.
T Consensus 232 ~~~~~~-~~D~vi~~~-----g~------------~~~~~~~~~~l~~~G~iv~ 267 (347)
T 2hcy_A 232 LKATDG-GAHGVINVS-----VS------------EAAIEASTRYVRANGTTVL 267 (347)
T ss_dssp HHHHTS-CEEEEEECS-----SC------------HHHHHHHTTSEEEEEEEEE
T ss_pred HHHhCC-CCCEEEECC-----Cc------------HHHHHHHHHHHhcCCEEEE
Confidence 444444 799999753 21 1245678899999999986
No 377
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=90.39 E-value=1.1 Score=38.38 Aligned_cols=101 Identities=13% Similarity=0.131 Sum_probs=63.7
Q ss_pred CCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCCCCCcEEEecCccChhhHHHHHhhcCCcccc
Q 021161 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKAD 121 (316)
Q Consensus 42 ~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~i~gV~~i~gDIt~~~t~~~I~~~~~~~~~D 121 (316)
++++|=-|+ .|+.-..+++++.. .+.+|+.++.++. +|+++.+..+.+.+.+ +++|
T Consensus 6 ~k~vlVTGa-s~gIG~~~a~~l~~-----------~G~~V~~~~r~~~----------~D~~~~~~v~~~~~~~--g~id 61 (223)
T 3uce_A 6 KTVYVVLGG-TSGIGAELAKQLES-----------EHTIVHVASRQTG----------LDISDEKSVYHYFETI--GAFD 61 (223)
T ss_dssp CEEEEEETT-TSHHHHHHHHHHCS-----------TTEEEEEESGGGT----------CCTTCHHHHHHHHHHH--CSEE
T ss_pred CCEEEEECC-CCHHHHHHHHHHHH-----------CCCEEEEecCCcc----------cCCCCHHHHHHHHHHh--CCCC
Confidence 445666665 47788889988852 3568888887654 7999998888777766 4799
Q ss_pred EEEeCCCCC--CCCCCCccH--H---HHHHHH--HHHHHHHHHcccCCcEEEEE
Q 021161 122 LVVCDGAPD--VTGLHDMDE--F---VQSQLI--LAGLTVVTHVLKEGGKFIAK 166 (316)
Q Consensus 122 lVvsDgapd--vtG~~~~de--~---~~~~L~--~aaL~~a~~vLkpGG~fV~K 166 (316)
+++.+.+.. .....+.+. + +...+. ...++.+...++++|++|.-
T Consensus 62 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~ 115 (223)
T 3uce_A 62 HLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLT 115 (223)
T ss_dssp EEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred EEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEe
Confidence 999987532 112222221 1 111111 23345556677778888763
No 378
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=90.24 E-value=0.31 Score=43.12 Aligned_cols=78 Identities=13% Similarity=0.052 Sum_probs=53.7
Q ss_pred CCCeEEEECCC-CCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC---------CCCCcEEEecCccChhhHHH
Q 021161 41 GVKRVVDLCAA-PGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAEV 110 (316)
Q Consensus 41 ~~~rVLDLcag-PG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~---------~i~gV~~i~gDIt~~~t~~~ 110 (316)
.+++||=.|++ .|+.-..+++++.. .+.+|+.++.++.. ...++.++++|+++...++.
T Consensus 7 ~~k~vlVTGas~~~gIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~ 75 (261)
T 2wyu_A 7 SGKKALVMGVTNQRSLGFAIAAKLKE-----------AGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDA 75 (261)
T ss_dssp TTCEEEEESCCSSSSHHHHHHHHHHH-----------HTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHH-----------CCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHH
Confidence 35688888986 38888888887741 24689999887520 12347889999999876655
Q ss_pred HHhhcC--CccccEEEeCCCC
Q 021161 111 VIRHFD--GCKADLVVCDGAP 129 (316)
Q Consensus 111 I~~~~~--~~~~DlVvsDgap 129 (316)
+.+... -+++|+||.+.+.
T Consensus 76 ~~~~~~~~~g~iD~lv~~Ag~ 96 (261)
T 2wyu_A 76 LFAGVKEAFGGLDYLVHAIAF 96 (261)
T ss_dssp HHHHHHHHHSSEEEEEECCCC
T ss_pred HHHHHHHHcCCCCEEEECCCC
Confidence 443221 1379999998753
No 379
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=89.77 E-value=1 Score=39.41 Aligned_cols=74 Identities=11% Similarity=0.102 Sum_probs=51.2
Q ss_pred CeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCC------CCCCCcEEEecCccChhhHHHHHhhcC
Q 021161 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM------APIEGVIQVQGDITNARTAEVVIRHFD 116 (316)
Q Consensus 43 ~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~------~~i~gV~~i~gDIt~~~t~~~I~~~~~ 116 (316)
++||=.|+ .|+.-..+++++.. .+.+|+.+|.++. ..++++.++++|+++....+.+.+...
T Consensus 3 k~vlVTGa-s~gIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 70 (247)
T 3dii_A 3 RGVIVTGG-GHGIGKQICLDFLE-----------AGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAM 70 (247)
T ss_dssp CEEEEEST-TSHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHH
T ss_pred CEEEEECC-CCHHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHhcccCCeEEeeCCCHHHHHHHHHHHH
Confidence 45666664 46778888887742 3578999998863 235678899999999876665543221
Q ss_pred --CccccEEEeCCC
Q 021161 117 --GCKADLVVCDGA 128 (316)
Q Consensus 117 --~~~~DlVvsDga 128 (316)
-+++|+|+.+.+
T Consensus 71 ~~~g~id~lv~nAg 84 (247)
T 3dii_A 71 EKLQRIDVLVNNAC 84 (247)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 137999999875
No 380
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=89.70 E-value=2 Score=38.09 Aligned_cols=75 Identities=12% Similarity=0.114 Sum_probs=52.1
Q ss_pred CCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCCCCCcEEEecCccChhhHHHHHhhcC--Ccc
Q 021161 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFD--GCK 119 (316)
Q Consensus 42 ~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~i~gV~~i~gDIt~~~t~~~I~~~~~--~~~ 119 (316)
+++||=.|+ .|+.-..+++++.. .+.+|+.++..+.. -.++.++++|+++...++.+.+... -+.
T Consensus 8 ~k~vlVTGa-s~gIG~~ia~~l~~-----------~G~~V~~~~r~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 74 (264)
T 2dtx_A 8 DKVVIVTGA-SMGIGRAIAERFVD-----------EGSKVIDLSIHDPG-EAKYDHIECDVTNPDQVKASIDHIFKEYGS 74 (264)
T ss_dssp TCEEEEESC-SSHHHHHHHHHHHH-----------TTCEEEEEESSCCC-SCSSEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCC-CCHHHHHHHHHHHH-----------CCCEEEEEecCccc-CCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 467777775 57788888887741 34689999987654 3467889999999876655443211 136
Q ss_pred ccEEEeCCCC
Q 021161 120 ADLVVCDGAP 129 (316)
Q Consensus 120 ~DlVvsDgap 129 (316)
+|+||.+.+.
T Consensus 75 iD~lv~~Ag~ 84 (264)
T 2dtx_A 75 ISVLVNNAGI 84 (264)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999998753
No 381
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=89.38 E-value=5.9 Score=34.77 Aligned_cols=74 Identities=12% Similarity=0.134 Sum_probs=51.8
Q ss_pred CCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCCCCCcEEEecCccChhhHHHHHhhc--CCcc
Q 021161 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHF--DGCK 119 (316)
Q Consensus 42 ~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~i~gV~~i~gDIt~~~t~~~I~~~~--~~~~ 119 (316)
+++||=.|+ .|+.-..+++++.. .+.+|+.++.++.. ...+..+++|+++.+.++.+.+.. .-++
T Consensus 21 ~k~vlVTGa-s~gIG~aia~~l~~-----------~G~~V~~~~r~~~~-~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~ 87 (253)
T 2nm0_A 21 SRSVLVTGG-NRGIGLAIARAFAD-----------AGDKVAITYRSGEP-PEGFLAVKCDITDTEQVEQAYKEIEETHGP 87 (253)
T ss_dssp CCEEEEETT-TSHHHHHHHHHHHH-----------TTCEEEEEESSSCC-CTTSEEEECCTTSHHHHHHHHHHHHHHTCS
T ss_pred CCEEEEeCC-CCHHHHHHHHHHHH-----------CCCEEEEEeCChHh-hccceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 467777775 57788888887641 34789999887643 455888999999987665544322 1146
Q ss_pred ccEEEeCCC
Q 021161 120 ADLVVCDGA 128 (316)
Q Consensus 120 ~DlVvsDga 128 (316)
+|+||.+.+
T Consensus 88 iD~lv~nAg 96 (253)
T 2nm0_A 88 VEVLIANAG 96 (253)
T ss_dssp CSEEEEECS
T ss_pred CCEEEECCC
Confidence 999999864
No 382
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=89.36 E-value=2.2 Score=38.49 Aligned_cols=74 Identities=9% Similarity=-0.048 Sum_probs=54.0
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCC-----------CCCcEEEecCccChhhHH
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-----------IEGVIQVQGDITNARTAE 109 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~-----------i~gV~~i~gDIt~~~t~~ 109 (316)
.+++||=.| |+|+.-..+++++.. .+.+|+++|..+... -.++.++++|+++...+.
T Consensus 4 ~~~~vlVTG-atG~iG~~l~~~L~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~ 71 (341)
T 3enk_A 4 TKGTILVTG-GAGYIGSHTAVELLA-----------HGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALA 71 (341)
T ss_dssp SSCEEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHH
T ss_pred CCcEEEEec-CCcHHHHHHHHHHHH-----------CCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHH
Confidence 346777666 678899999888742 246899999876431 247889999999988776
Q ss_pred HHHhhcCCccccEEEeCCCC
Q 021161 110 VVIRHFDGCKADLVVCDGAP 129 (316)
Q Consensus 110 ~I~~~~~~~~~DlVvsDgap 129 (316)
.+.+. ..+|+|+...+.
T Consensus 72 ~~~~~---~~~d~vih~A~~ 88 (341)
T 3enk_A 72 RIFDA---HPITAAIHFAAL 88 (341)
T ss_dssp HHHHH---SCCCEEEECCCC
T ss_pred HHHhc---cCCcEEEECccc
Confidence 66543 369999988654
No 383
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=89.34 E-value=2.1 Score=37.50 Aligned_cols=77 Identities=17% Similarity=0.158 Sum_probs=50.7
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCC------C-CCcEEEecCccChhhHHHHHh
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP------I-EGVIQVQGDITNARTAEVVIR 113 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~------i-~gV~~i~gDIt~~~t~~~I~~ 113 (316)
.+++||=-|++ |++-..+++++.. .+.+|+.+|.++... + ..+.++++|+++.+..+.+.+
T Consensus 6 ~~k~~lVTGas-~gIG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 73 (257)
T 3tpc_A 6 KSRVFIVTGAS-SGLGAAVTRMLAQ-----------EGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALA 73 (257)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHH-----------TTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHH-----------CCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHH
Confidence 34667777755 6778888887742 357899999886421 1 257889999999876665544
Q ss_pred hcC--CccccEEEeCCCC
Q 021161 114 HFD--GCKADLVVCDGAP 129 (316)
Q Consensus 114 ~~~--~~~~DlVvsDgap 129 (316)
... -+++|++|.+.+.
T Consensus 74 ~~~~~~g~id~lv~nAg~ 91 (257)
T 3tpc_A 74 FAKQEFGHVHGLVNCAGT 91 (257)
T ss_dssp HHHHHHSCCCEEEECCCC
T ss_pred HHHHHcCCCCEEEECCCC
Confidence 221 1379999998653
No 384
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=89.34 E-value=4.8 Score=36.66 Aligned_cols=72 Identities=17% Similarity=0.080 Sum_probs=48.0
Q ss_pred CeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-------C--------CCCcEEEecCccChhh
Q 021161 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-------P--------IEGVIQVQGDITNART 107 (316)
Q Consensus 43 ~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-------~--------i~gV~~i~gDIt~~~t 107 (316)
++||=.| |+|.....+++++.. .+.+|++++..+.. . ..++.++++|+++...
T Consensus 2 ~~vlVtG-atG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~ 69 (372)
T 1db3_A 2 KVALITG-VTGQDGSYLAEFLLE-----------KGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSN 69 (372)
T ss_dssp CEEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEECC---------------------CCEEECCCCSSCHHH
T ss_pred CEEEEEC-CCChHHHHHHHHHHH-----------CCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHH
Confidence 4566555 568899998887741 24689998876431 1 1468889999999876
Q ss_pred HHHHHhhcCCccccEEEeCCCC
Q 021161 108 AEVVIRHFDGCKADLVVCDGAP 129 (316)
Q Consensus 108 ~~~I~~~~~~~~~DlVvsDgap 129 (316)
+..+.+.. .+|.|+..++.
T Consensus 70 ~~~~~~~~---~~d~vih~A~~ 88 (372)
T 1db3_A 70 LTRILREV---QPDEVYNLGAM 88 (372)
T ss_dssp HHHHHHHH---CCSEEEECCCC
T ss_pred HHHHHHhc---CCCEEEECCcc
Confidence 66554432 58999998764
No 385
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=89.13 E-value=0.88 Score=42.09 Aligned_cols=92 Identities=18% Similarity=0.199 Sum_probs=56.9
Q ss_pred cCCCCeEEEECCC--CCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCC----CCCcE-EEecCccChhhHHHH
Q 021161 39 FEGVKRVVDLCAA--PGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVI-QVQGDITNARTAEVV 111 (316)
Q Consensus 39 ~~~~~rVLDLcag--PG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~----i~gV~-~i~gDIt~~~t~~~I 111 (316)
++++.+||=.||+ -|.....+++.. +.+|++++.++... --|.. .+ |.. ....+.+
T Consensus 157 ~~~g~~VlV~Gasg~iG~~~~~~a~~~--------------Ga~Vi~~~~~~~~~~~~~~~ga~~v~--~~~-~~~~~~v 219 (342)
T 4eye_A 157 LRAGETVLVLGAAGGIGTAAIQIAKGM--------------GAKVIAVVNRTAATEFVKSVGADIVL--PLE-EGWAKAV 219 (342)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT--------------TCEEEEEESSGGGHHHHHHHTCSEEE--ESS-TTHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHc--------------CCEEEEEeCCHHHHHHHHhcCCcEEe--cCc-hhHHHHH
Confidence 4688999988872 244444455544 36999999876421 01222 22 222 3345556
Q ss_pred HhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEE
Q 021161 112 IRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (316)
Q Consensus 112 ~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~ 165 (316)
.+...+..+|+|+.. .|.. .+..+..+|++||+++.
T Consensus 220 ~~~~~~~g~Dvvid~-----~g~~-------------~~~~~~~~l~~~G~iv~ 255 (342)
T 4eye_A 220 REATGGAGVDMVVDP-----IGGP-------------AFDDAVRTLASEGRLLV 255 (342)
T ss_dssp HHHTTTSCEEEEEES-----CC---------------CHHHHHHTEEEEEEEEE
T ss_pred HHHhCCCCceEEEEC-----Cchh-------------HHHHHHHhhcCCCEEEE
Confidence 666666689999953 3321 14567889999999997
No 386
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=89.08 E-value=1.3 Score=40.30 Aligned_cols=72 Identities=21% Similarity=0.193 Sum_probs=53.0
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCC---------C------CCcEEEecCccCh
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP---------I------EGVIQVQGDITNA 105 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~---------i------~gV~~i~gDIt~~ 105 (316)
.+++||=.| |+|....++++.+.. .+.+|++++..+... . .+++++++|+++.
T Consensus 24 ~~~~vlVtG-atG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~ 91 (351)
T 3ruf_A 24 SPKTWLITG-VAGFIGSNLLEKLLK-----------LNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDL 91 (351)
T ss_dssp SCCEEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCH
T ss_pred CCCeEEEEC-CCcHHHHHHHHHHHH-----------CCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCH
Confidence 457888776 678899999888741 246899999876431 1 6899999999998
Q ss_pred hhHHHHHhhcCCccccEEEeCCCC
Q 021161 106 RTAEVVIRHFDGCKADLVVCDGAP 129 (316)
Q Consensus 106 ~t~~~I~~~~~~~~~DlVvsDgap 129 (316)
..+..+ +. .+|.|+.-++.
T Consensus 92 ~~~~~~---~~--~~d~Vih~A~~ 110 (351)
T 3ruf_A 92 TTCEQV---MK--GVDHVLHQAAL 110 (351)
T ss_dssp HHHHHH---TT--TCSEEEECCCC
T ss_pred HHHHHH---hc--CCCEEEECCcc
Confidence 765543 33 69999987653
No 387
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=89.08 E-value=0.59 Score=43.23 Aligned_cols=92 Identities=15% Similarity=0.129 Sum_probs=54.0
Q ss_pred CCCeEEEECCCC-CHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-C---CCCcEEEecCccC-hhhHHHHHhh
Q 021161 41 GVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-P---IEGVIQVQGDITN-ARTAEVVIRH 114 (316)
Q Consensus 41 ~~~rVLDLcagP-G~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-~---i~gV~~i~gDIt~-~~t~~~I~~~ 114 (316)
++.+||-+|+|+ |.+...+++.+. ++.+|+++|.++.. . --|...+ -|..+ .....++
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~------------~Ga~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~--- 233 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALM------------KNITIVGISRSKKHRDFALELGADYV-SEMKDAESLINKL--- 233 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHC------------TTCEEEEECSCHHHHHHHHHHTCSEE-ECHHHHHHHHHHH---
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhc------------CCCEEEEEeCCHHHHHHHHHhCCCEE-eccccchHHHHHh---
Confidence 789999999864 555555666551 12689999987632 0 0132211 12222 2222222
Q ss_pred cCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEE
Q 021161 115 FDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (316)
Q Consensus 115 ~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~ 165 (316)
..+..+|+|+- ++|. ...+..+.++|++||+++.
T Consensus 234 ~~g~g~D~vid-----~~g~------------~~~~~~~~~~l~~~G~iv~ 267 (344)
T 2h6e_A 234 TDGLGASIAID-----LVGT------------EETTYNLGKLLAQEGAIIL 267 (344)
T ss_dssp HTTCCEEEEEE-----SSCC------------HHHHHHHHHHEEEEEEEEE
T ss_pred hcCCCccEEEE-----CCCC------------hHHHHHHHHHhhcCCEEEE
Confidence 23457999994 3332 1245677899999999987
No 388
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=89.02 E-value=0.99 Score=40.09 Aligned_cols=113 Identities=15% Similarity=0.071 Sum_probs=66.8
Q ss_pred CCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCCcEEEecCccChhhHHH
Q 021161 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTAEV 110 (316)
Q Consensus 42 ~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~gV~~i~gDIt~~~t~~~ 110 (316)
+++||=-|+ .|++-..+++++.. .+.+|+.++..... .-..+.++++|+++...++.
T Consensus 18 ~k~~lVTGa-s~gIG~aia~~l~~-----------~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 85 (270)
T 3is3_A 18 GKVALVTGS-GRGIGAAVAVHLGR-----------LGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVK 85 (270)
T ss_dssp TCEEEESCT-TSHHHHHHHHHHHH-----------TTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHH
T ss_pred CCEEEEECC-CchHHHHHHHHHHH-----------CCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHH
Confidence 466776665 57788888887742 35788888765421 01357889999999886655
Q ss_pred HHhhcC--CccccEEEeCCCCCCCC-CCCccH--H---HHHHHH--HHHHHHHHHcccCCcEEEEE
Q 021161 111 VIRHFD--GCKADLVVCDGAPDVTG-LHDMDE--F---VQSQLI--LAGLTVVTHVLKEGGKFIAK 166 (316)
Q Consensus 111 I~~~~~--~~~~DlVvsDgapdvtG-~~~~de--~---~~~~L~--~aaL~~a~~vLkpGG~fV~K 166 (316)
+.+... -++.|++|.+.+....+ +.+.+. + +...+. ...++.+...++.+|++|.-
T Consensus 86 ~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~i 151 (270)
T 3is3_A 86 LFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLT 151 (270)
T ss_dssp HHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEE
Confidence 443221 13699999986532221 222221 1 111111 23345556677789998863
No 389
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=88.88 E-value=0.74 Score=42.88 Aligned_cols=96 Identities=11% Similarity=0.020 Sum_probs=58.4
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----CCCCcEEEecCccChhhHHHHHhh
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNARTAEVVIRH 114 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----~i~gV~~i~gDIt~~~t~~~I~~~ 114 (316)
++++.+||-.|++ |+..+.+.+.... .+++|+++|.++.. .--|... ..|..+....+.+.+.
T Consensus 168 ~~~g~~vlV~Gas-ggiG~~~~~~a~~-----------~Ga~Vi~~~~~~~~~~~~~~~ga~~-~~d~~~~~~~~~~~~~ 234 (351)
T 1yb5_A 168 VKAGESVLVHGAS-GGVGLAACQIARA-----------YGLKILGTAGTEEGQKIVLQNGAHE-VFNHREVNYIDKIKKY 234 (351)
T ss_dssp CCTTCEEEEETCS-SHHHHHHHHHHHH-----------TTCEEEEEESSHHHHHHHHHTTCSE-EEETTSTTHHHHHHHH
T ss_pred CCCcCEEEEECCC-ChHHHHHHHHHHH-----------CCCEEEEEeCChhHHHHHHHcCCCE-EEeCCCchHHHHHHHH
Confidence 4678999999973 4444444333210 13689999987631 0113221 1245555555666666
Q ss_pred cCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEE
Q 021161 115 FDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (316)
Q Consensus 115 ~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~ 165 (316)
..+..+|+|+... |. ..+..+.++|++||+++.
T Consensus 235 ~~~~~~D~vi~~~-----G~-------------~~~~~~~~~l~~~G~iv~ 267 (351)
T 1yb5_A 235 VGEKGIDIIIEML-----AN-------------VNLSKDLSLLSHGGRVIV 267 (351)
T ss_dssp HCTTCEEEEEESC-----HH-------------HHHHHHHHHEEEEEEEEE
T ss_pred cCCCCcEEEEECC-----Ch-------------HHHHHHHHhccCCCEEEE
Confidence 6666899999642 21 124567889999999987
No 390
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=88.86 E-value=0.43 Score=38.34 Aligned_cols=96 Identities=15% Similarity=0.069 Sum_probs=62.5
Q ss_pred CeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----CCCCcEEEecCccChhhHHHHHhhcCCc
Q 021161 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNARTAEVVIRHFDGC 118 (316)
Q Consensus 43 ~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----~i~gV~~i~gDIt~~~t~~~I~~~~~~~ 118 (316)
.+|+=+|+ |.+.+.+++.+.. .+..|+++|.++.. .-.|+..+.||.++..++.. ..-.
T Consensus 8 ~~viIiG~--G~~G~~la~~L~~-----------~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~----a~i~ 70 (140)
T 3fwz_A 8 NHALLVGY--GRVGSLLGEKLLA-----------SDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQL----AHLE 70 (140)
T ss_dssp SCEEEECC--SHHHHHHHHHHHH-----------TTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHH----TTGG
T ss_pred CCEEEECc--CHHHHHHHHHHHH-----------CCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHh----cCcc
Confidence 46777776 7788888888741 24689999998842 12588899999999876543 3346
Q ss_pred cccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEEcc
Q 021161 119 KADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (316)
Q Consensus 119 ~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Kif~ 169 (316)
.+|+|++-... ++. . .. +....+.+.|+...+++...
T Consensus 71 ~ad~vi~~~~~--------~~~-n----~~-~~~~a~~~~~~~~iiar~~~ 107 (140)
T 3fwz_A 71 CAKWLILTIPN--------GYE-A----GE-IVASARAKNPDIEIIARAHY 107 (140)
T ss_dssp GCSEEEECCSC--------HHH-H----HH-HHHHHHHHCSSSEEEEEESS
T ss_pred cCCEEEEECCC--------hHH-H----HH-HHHHHHHHCCCCeEEEEECC
Confidence 79999974211 111 1 01 12234567788888887654
No 391
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=88.49 E-value=2.9 Score=36.91 Aligned_cols=113 Identities=13% Similarity=0.075 Sum_probs=66.9
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-------------CCCCcEEEecCccChhh
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-------------PIEGVIQVQGDITNART 107 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-------------~i~gV~~i~gDIt~~~t 107 (316)
.+++||=-|++ |++-..+++++.. .+.+|+.++..... .-..+.++++|+++.+.
T Consensus 10 ~~k~vlVTGas-~GIG~aia~~la~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~ 77 (262)
T 3ksu_A 10 KNKVIVIAGGI-KNLGALTAKTFAL-----------ESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEE 77 (262)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHTT-----------SSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHH-----------CCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHH
Confidence 35677777765 6688888888852 35789888765321 01247788999999887
Q ss_pred HHHHHhhcC--CccccEEEeCCCCCCC-CCCCcc--HH---HHHHHH--HHHHHHHHHcccCCcEEEE
Q 021161 108 AEVVIRHFD--GCKADLVVCDGAPDVT-GLHDMD--EF---VQSQLI--LAGLTVVTHVLKEGGKFIA 165 (316)
Q Consensus 108 ~~~I~~~~~--~~~~DlVvsDgapdvt-G~~~~d--e~---~~~~L~--~aaL~~a~~vLkpGG~fV~ 165 (316)
.+.+.+... -++.|++|.+.+.... ...+.+ ++ +...+. ...++.+...|+++|++|.
T Consensus 78 v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~ 145 (262)
T 3ksu_A 78 VAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIIT 145 (262)
T ss_dssp HHHHHHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEE
Confidence 665554321 1379999998653221 122222 11 111221 2234455556677888876
No 392
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=88.24 E-value=3 Score=37.43 Aligned_cols=73 Identities=16% Similarity=0.004 Sum_probs=52.2
Q ss_pred CCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCC----------CCCcEEEecCccChhhHHHH
Q 021161 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----------IEGVIQVQGDITNARTAEVV 111 (316)
Q Consensus 42 ~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~----------i~gV~~i~gDIt~~~t~~~I 111 (316)
+++||=.| |+|....++++++.. .+.+|++++..+... ..++.++++|+++...+..+
T Consensus 3 ~~~vlVtG-atG~iG~~l~~~L~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 70 (345)
T 2z1m_A 3 GKRALITG-IRGQDGAYLAKLLLE-----------KGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRT 70 (345)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHH
T ss_pred CCEEEEEC-CCChHHHHHHHHHHH-----------CCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHH
Confidence 46777666 568899999887741 246899999876421 13688999999998766555
Q ss_pred HhhcCCccccEEEeCCCC
Q 021161 112 IRHFDGCKADLVVCDGAP 129 (316)
Q Consensus 112 ~~~~~~~~~DlVvsDgap 129 (316)
.+.. .+|.|+...+.
T Consensus 71 ~~~~---~~d~vih~A~~ 85 (345)
T 2z1m_A 71 IEKV---QPDEVYNLAAQ 85 (345)
T ss_dssp HHHH---CCSEEEECCCC
T ss_pred HHhc---CCCEEEECCCC
Confidence 4332 58999998754
No 393
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=88.23 E-value=3.3 Score=35.37 Aligned_cols=76 Identities=14% Similarity=0.052 Sum_probs=52.1
Q ss_pred CCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCC--CEEEEEeCCCCCC-------CCCcEEEecCccChhhHHHHH
Q 021161 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDL--PLIVAIDLQPMAP-------IEGVIQVQGDITNARTAEVVI 112 (316)
Q Consensus 42 ~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~--~~IvaVDl~~~~~-------i~gV~~i~gDIt~~~t~~~I~ 112 (316)
+++||=.| |.|+....+++++.. .+ .+|++++.++... -.++.++++|+++...+..+.
T Consensus 3 ~k~vlItG-asggiG~~la~~l~~-----------~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~ 70 (250)
T 1yo6_A 3 PGSVVVTG-ANRGIGLGLVQQLVK-----------DKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFV 70 (250)
T ss_dssp CSEEEESS-CSSHHHHHHHHHHHT-----------CTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHH
T ss_pred CCEEEEec-CCchHHHHHHHHHHh-----------cCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHH
Confidence 35666555 568888899888742 24 6899999876321 236788999999987665554
Q ss_pred hh----cCCccccEEEeCCCC
Q 021161 113 RH----FDGCKADLVVCDGAP 129 (316)
Q Consensus 113 ~~----~~~~~~DlVvsDgap 129 (316)
+. ++...+|+|+...+.
T Consensus 71 ~~~~~~~g~~~id~li~~Ag~ 91 (250)
T 1yo6_A 71 SKVGEIVGSDGLSLLINNAGV 91 (250)
T ss_dssp HHHHHHHGGGCCCEEEECCCC
T ss_pred HHHHHhcCCCCCcEEEECCcc
Confidence 43 221279999998653
No 394
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=88.23 E-value=1.9 Score=38.39 Aligned_cols=112 Identities=13% Similarity=0.196 Sum_probs=67.9
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCCcEEEecCccChhhHH
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTAE 109 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~gV~~i~gDIt~~~t~~ 109 (316)
.+++||=.|++ |+.-..+++++.. .+.+|+.++..... .-..+.++++|+++.+.++
T Consensus 30 ~gk~~lVTGas-~GIG~aia~~la~-----------~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~ 97 (271)
T 3v2g_A 30 AGKTAFVTGGS-RGIGAAIAKRLAL-----------EGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIE 97 (271)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH-----------TTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHH-----------CCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHH
Confidence 45678877765 6677888877642 35788888766521 0235778999999987665
Q ss_pred HHHh----hcCCccccEEEeCCCCCCC-CCCCcc--H---HHHHHHH--HHHHHHHHHcccCCcEEEEE
Q 021161 110 VVIR----HFDGCKADLVVCDGAPDVT-GLHDMD--E---FVQSQLI--LAGLTVVTHVLKEGGKFIAK 166 (316)
Q Consensus 110 ~I~~----~~~~~~~DlVvsDgapdvt-G~~~~d--e---~~~~~L~--~aaL~~a~~vLkpGG~fV~K 166 (316)
.+.+ .+ +++|+||.+.+.... .+.+.+ + .+...+. ...++.+...|+.+|++|.-
T Consensus 98 ~~~~~~~~~~--g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~i 164 (271)
T 3v2g_A 98 QAIRETVEAL--GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITI 164 (271)
T ss_dssp HHHHHHHHHH--SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHHc--CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 5443 33 379999998653221 122222 1 1111111 23345566677889998863
No 395
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=88.20 E-value=3.7 Score=36.22 Aligned_cols=113 Identities=15% Similarity=0.067 Sum_probs=68.6
Q ss_pred CCCeEEEECCCCC-HHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC---------CC--CCcEEEecCccChhhH
Q 021161 41 GVKRVVDLCAAPG-SWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PI--EGVIQVQGDITNARTA 108 (316)
Q Consensus 41 ~~~rVLDLcagPG-~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~---------~i--~gV~~i~gDIt~~~t~ 108 (316)
.|+++|=-|++.+ |.-..+++++.. .+++|+.+|.++.. .. ..+..++.|+++.+..
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~-----------~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 73 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQ-----------LGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEV 73 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHH-----------TTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHH-----------CCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHH
Confidence 4678888888653 577777777641 35799999988632 12 3578899999998765
Q ss_pred HHHH----hhcCCccccEEEeCCCCCC-C---C-CCC--ccHHHH-HHH----HHHHHHHHHHcccCCcEEEEE
Q 021161 109 EVVI----RHFDGCKADLVVCDGAPDV-T---G-LHD--MDEFVQ-SQL----ILAGLTVVTHVLKEGGKFIAK 166 (316)
Q Consensus 109 ~~I~----~~~~~~~~DlVvsDgapdv-t---G-~~~--~de~~~-~~L----~~aaL~~a~~vLkpGG~fV~K 166 (316)
+.+. +.| ++.|.++.+.+... . + ..+ .+++.. ..+ .......+..+++.||++|.-
T Consensus 74 ~~~~~~~~~~~--G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVni 145 (256)
T 4fs3_A 74 INGFEQIGKDV--GNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVAT 145 (256)
T ss_dssp HHHHHHHHHHH--CCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEE
T ss_pred HHHHHHHHHHh--CCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEE
Confidence 5544 344 47999999864211 1 1 111 122221 111 122234456678889998864
No 396
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=88.11 E-value=0.53 Score=43.63 Aligned_cols=91 Identities=15% Similarity=0.093 Sum_probs=55.4
Q ss_pred cCCCCeEEEECC-CC-CHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----CCCCcEEEecCccChhhHHHHH
Q 021161 39 FEGVKRVVDLCA-AP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNARTAEVVI 112 (316)
Q Consensus 39 ~~~~~rVLDLca-gP-G~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----~i~gV~~i~gDIt~~~t~~~I~ 112 (316)
++++.+||=+|| |+ |.....+++.. +++|+++ .++.. .--|...+ | .+....+.+.
T Consensus 148 ~~~g~~VlV~Ga~g~iG~~~~q~a~~~--------------Ga~Vi~~-~~~~~~~~~~~lGa~~i--~-~~~~~~~~~~ 209 (343)
T 3gaz_A 148 VQDGQTVLIQGGGGGVGHVAIQIALAR--------------GARVFAT-ARGSDLEYVRDLGATPI--D-ASREPEDYAA 209 (343)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT--------------TCEEEEE-ECHHHHHHHHHHTSEEE--E-TTSCHHHHHH
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHC--------------CCEEEEE-eCHHHHHHHHHcCCCEe--c-cCCCHHHHHH
Confidence 468899999995 32 44444445544 3689988 54421 01244433 3 3333444555
Q ss_pred hhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEE
Q 021161 113 RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (316)
Q Consensus 113 ~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~ 165 (316)
+...+..+|+|+- +.|. ..+..+..+|++||++|.
T Consensus 210 ~~~~~~g~D~vid-----~~g~-------------~~~~~~~~~l~~~G~iv~ 244 (343)
T 3gaz_A 210 EHTAGQGFDLVYD-----TLGG-------------PVLDASFSAVKRFGHVVS 244 (343)
T ss_dssp HHHTTSCEEEEEE-----SSCT-------------HHHHHHHHHEEEEEEEEE
T ss_pred HHhcCCCceEEEE-----CCCc-------------HHHHHHHHHHhcCCeEEE
Confidence 5566678999985 3331 135667889999999987
No 397
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=88.08 E-value=0.64 Score=42.63 Aligned_cols=95 Identities=18% Similarity=0.045 Sum_probs=56.1
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----CCCCcEEEecCccC-hhhHHHHHh
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITN-ARTAEVVIR 113 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----~i~gV~~i~gDIt~-~~t~~~I~~ 113 (316)
++++.+||-.||+ |+.-+.+++.+.. .+.+|+++|.++.. .--|... ..|.++ ....+.+.+
T Consensus 143 ~~~g~~vlV~Ga~-ggiG~~~~~~~~~-----------~G~~V~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~~~~~ 209 (333)
T 1v3u_A 143 VKGGETVLVSAAA-GAVGSVVGQIAKL-----------KGCKVVGAAGSDEKIAYLKQIGFDA-AFNYKTVNSLEEALKK 209 (333)
T ss_dssp CCSSCEEEEESTT-BHHHHHHHHHHHH-----------TTCEEEEEESSHHHHHHHHHTTCSE-EEETTSCSCHHHHHHH
T ss_pred CCCCCEEEEecCC-CcHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHhcCCcE-EEecCCHHHHHHHHHH
Confidence 4678999999973 3444444443320 13689999987521 0113221 225555 333444444
Q ss_pred hcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEE
Q 021161 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (316)
Q Consensus 114 ~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~ 165 (316)
... +.+|+|+... |. ..+..+.++|++||++++
T Consensus 210 ~~~-~~~d~vi~~~-----g~-------------~~~~~~~~~l~~~G~~v~ 242 (333)
T 1v3u_A 210 ASP-DGYDCYFDNV-----GG-------------EFLNTVLSQMKDFGKIAI 242 (333)
T ss_dssp HCT-TCEEEEEESS-----CH-------------HHHHHHHTTEEEEEEEEE
T ss_pred HhC-CCCeEEEECC-----Ch-------------HHHHHHHHHHhcCCEEEE
Confidence 333 5799999653 21 125667899999999986
No 398
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=88.04 E-value=4.1 Score=36.58 Aligned_cols=73 Identities=16% Similarity=0.063 Sum_probs=50.5
Q ss_pred CCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCC-------CC---CCCcEEEecCccChhhHHHH
Q 021161 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-------AP---IEGVIQVQGDITNARTAEVV 111 (316)
Q Consensus 42 ~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~-------~~---i~gV~~i~gDIt~~~t~~~I 111 (316)
+++||=.| |+|.....+++++.. .+.+.+|+++|..+. .. ..++.++++|+++...+..+
T Consensus 3 ~m~vlVTG-atG~iG~~l~~~L~~---------~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 72 (336)
T 2hun_A 3 SMKLLVTG-GMGFIGSNFIRYILE---------KHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKEL 72 (336)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHH---------HCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHH
T ss_pred CCeEEEEC-CCchHHHHHHHHHHH---------hCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHH
Confidence 36777666 568888888887641 112368999987641 11 24788999999998766554
Q ss_pred HhhcCCccccEEEeCCCC
Q 021161 112 IRHFDGCKADLVVCDGAP 129 (316)
Q Consensus 112 ~~~~~~~~~DlVvsDgap 129 (316)
. ..+|.|+...+.
T Consensus 73 ~-----~~~d~vih~A~~ 85 (336)
T 2hun_A 73 V-----RKVDGVVHLAAE 85 (336)
T ss_dssp H-----HTCSEEEECCCC
T ss_pred h-----hCCCEEEECCCC
Confidence 3 469999998654
No 399
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=87.92 E-value=7.6 Score=34.59 Aligned_cols=74 Identities=12% Similarity=0.137 Sum_probs=56.7
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----CCCCcEEEecCccChhhHHHHHhhcC
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNARTAEVVIRHFD 116 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----~i~gV~~i~gDIt~~~t~~~I~~~~~ 116 (316)
.|+++|=-|++. |.-..+++++.. .+++|+.+|+++.. .-..+..++.|+++.+.++++.+.|+
T Consensus 10 ~GK~alVTGas~-GIG~aia~~la~-----------~Ga~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g 77 (242)
T 4b79_A 10 AGQQVLVTGGSS-GIGAAIAMQFAE-----------LGAEVVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFEALP 77 (242)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHH-----------TTCEEEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHHHCS
T ss_pred CCCEEEEeCCCC-HHHHHHHHHHHH-----------CCCEEEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHHhcC
Confidence 467788777665 567777777642 35799999998743 13468889999999999888888874
Q ss_pred CccccEEEeCCC
Q 021161 117 GCKADLVVCDGA 128 (316)
Q Consensus 117 ~~~~DlVvsDga 128 (316)
+.|++|.+..
T Consensus 78 --~iDiLVNNAG 87 (242)
T 4b79_A 78 --RLDVLVNNAG 87 (242)
T ss_dssp --CCSEEEECCC
T ss_pred --CCCEEEECCC
Confidence 7999999864
No 400
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=87.89 E-value=7.2 Score=34.70 Aligned_cols=75 Identities=13% Similarity=0.082 Sum_probs=55.7
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC------CC-CCcEEEecCccChhhHHHHHh
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PI-EGVIQVQGDITNARTAEVVIR 113 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~------~i-~gV~~i~gDIt~~~t~~~I~~ 113 (316)
.+++||=-|++ |+.-..+++++.. .+.+|+.++.++.. .+ .++.++++|+++...++.+.+
T Consensus 15 ~gk~vlVTGas-~gIG~~~a~~L~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~ 82 (291)
T 3rd5_A 15 AQRTVVITGAN-SGLGAVTARELAR-----------RGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFAD 82 (291)
T ss_dssp TTCEEEEECCS-SHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHH-----------CCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHH
Confidence 45677777755 7788888888742 34789999987631 22 357889999999998887777
Q ss_pred hcCCccccEEEeCCCC
Q 021161 114 HFDGCKADLVVCDGAP 129 (316)
Q Consensus 114 ~~~~~~~DlVvsDgap 129 (316)
.+ +.+|+||.+.+.
T Consensus 83 ~~--~~iD~lv~nAg~ 96 (291)
T 3rd5_A 83 GV--SGADVLINNAGI 96 (291)
T ss_dssp TC--CCEEEEEECCCC
T ss_pred hc--CCCCEEEECCcC
Confidence 66 479999999753
No 401
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=87.86 E-value=0.86 Score=42.15 Aligned_cols=86 Identities=13% Similarity=0.077 Sum_probs=53.3
Q ss_pred cCCCCeEEEECCCC-CHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCC----CCCcEEEecCccChhhHHHHHh
Q 021161 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITNARTAEVVIR 113 (316)
Q Consensus 39 ~~~~~rVLDLcagP-G~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~----i~gV~~i~gDIt~~~t~~~I~~ 113 (316)
+++|.+||=.|+|+ |.....+++..+ .+|+++|.++... --|...+. ++..
T Consensus 174 ~~~g~~VlV~GaG~vG~~a~qla~~~G--------------a~Vi~~~~~~~~~~~~~~lGa~~v~---~~~~------- 229 (348)
T 3two_A 174 VTKGTKVGVAGFGGLGSMAVKYAVAMG--------------AEVSVFARNEHKKQDALSMGVKHFY---TDPK------- 229 (348)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHTT--------------CEEEEECSSSTTHHHHHHTTCSEEE---SSGG-------
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCC--------------CeEEEEeCCHHHHHHHHhcCCCeec---CCHH-------
Confidence 47889999999765 555555565543 6899999887531 12332222 2221
Q ss_pred hcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEE
Q 021161 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (316)
Q Consensus 114 ~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~K 166 (316)
.+. +.+|+|+- +.|.. ..+..+.++|++||+++.-
T Consensus 230 ~~~-~~~D~vid-----~~g~~------------~~~~~~~~~l~~~G~iv~~ 264 (348)
T 3two_A 230 QCK-EELDFIIS-----TIPTH------------YDLKDYLKLLTYNGDLALV 264 (348)
T ss_dssp GCC-SCEEEEEE-----CCCSC------------CCHHHHHTTEEEEEEEEEC
T ss_pred HHh-cCCCEEEE-----CCCcH------------HHHHHHHHHHhcCCEEEEE
Confidence 122 27999984 33322 1245678999999999973
No 402
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=87.83 E-value=2.8 Score=37.32 Aligned_cols=77 Identities=13% Similarity=0.068 Sum_probs=51.6
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC--------------------------CCCC
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------------------------PIEG 94 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~--------------------------~i~g 94 (316)
.+++||=-|++ |++-..+++++.. .+.+|+.+|.++-. .-..
T Consensus 10 ~~k~~lVTGas-~gIG~aia~~la~-----------~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (286)
T 3uve_A 10 EGKVAFVTGAA-RGQGRSHAVRLAQ-----------EGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRR 77 (286)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHH-----------TTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCC
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHH-----------CCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCc
Confidence 35677777765 5677788877742 35789999987310 0135
Q ss_pred cEEEecCccChhhHHHHHhhcC--CccccEEEeCCCC
Q 021161 95 VIQVQGDITNARTAEVVIRHFD--GCKADLVVCDGAP 129 (316)
Q Consensus 95 V~~i~gDIt~~~t~~~I~~~~~--~~~~DlVvsDgap 129 (316)
+.++++|+++...++.+.+... .++.|++|.+.+.
T Consensus 78 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~ 114 (286)
T 3uve_A 78 IVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGI 114 (286)
T ss_dssp EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred eEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCcc
Confidence 7889999999887665544221 1379999999753
No 403
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=87.72 E-value=0.73 Score=42.51 Aligned_cols=111 Identities=11% Similarity=0.057 Sum_probs=67.4
Q ss_pred CCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC---------CCCCcEEEecCccChhhHHHHH
Q 021161 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAEVVI 112 (316)
Q Consensus 42 ~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~---------~i~gV~~i~gDIt~~~t~~~I~ 112 (316)
+..+|||-+|+|+++..+.++ ..+++.||+.+.+ ....+.++++|.... +.
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS~---------------~d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~-----L~ 151 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLRS---------------QDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSK-----LN 151 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSCT---------------TSEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHH-----HH
T ss_pred CCCceeEeCCcHHHHHHHcCC---------------CCeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHH-----HH
Confidence 567999999999988776542 2589999998831 224678888886542 22
Q ss_pred hhc-CCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEEE--ccCCCHHHHHHHHH
Q 021161 113 RHF-DGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI--FRGKDTSLLYCQLK 181 (316)
Q Consensus 113 ~~~-~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~Ki--f~~~~~~~l~~~l~ 181 (316)
... ...++|+|+.|.+... .+++.. +..++. ....+.++|++++=. ........+...|+
T Consensus 152 ~l~~~~~~fdLVfiDPPYe~-----k~~~~~---vl~~L~-~~~~r~~~Gi~v~WYPi~~~~~~~~~~~~l~ 214 (283)
T 2oo3_A 152 ALLPPPEKRGLIFIDPSYER-----KEEYKE---IPYAIK-NAYSKFSTGLYCVWYPVVNKAWTEQFLRKMR 214 (283)
T ss_dssp HHCSCTTSCEEEEECCCCCS-----TTHHHH---HHHHHH-HHHHHCTTSEEEEEEEESSHHHHHHHHHHHH
T ss_pred HhcCCCCCccEEEECCCCCC-----CcHHHH---HHHHHH-HhCccCCCeEEEEEEeccchHHHHHHHHHHH
Confidence 222 2357999999975421 122211 122222 245778999998732 12223455666664
No 404
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=87.65 E-value=10 Score=35.11 Aligned_cols=111 Identities=16% Similarity=0.129 Sum_probs=66.7
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----CCCCcEEEecCccChhhHHHHHhhcC
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNARTAEVVIRHFD 116 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----~i~gV~~i~gDIt~~~t~~~I~~~~~ 116 (316)
++..||=+|||||.+...|+++.+. -....+.+-+|-.+.. +.++|+.++.= .++..+..+.+.+.
T Consensus 60 ~~~~VVYVGSApG~HL~~L~~~fp~---------~f~~ikWvLiDPap~~~~l~~~~NV~li~~f-vde~dl~~l~~~~~ 129 (307)
T 3mag_A 60 DGATVVYIGSAPGTHIRYLRDHFYN---------LGVIIKWMLIDGRHHDPILNGLRDVTLVTRF-VDEEYLRSIKKQLH 129 (307)
T ss_dssp TTCEEEEESCCSCHHHHHHHHHHHH---------TTCCCEEEEEESSCCCGGGTTCTTEEEEECC-CCHHHHHHHHHHHT
T ss_pred CCcEEEEecccCccHHHHHHHhchh---------hCCCeEEEEEcCCcchhhhcCCCcEEEEecc-CCHHHHHHHHHhcc
Confidence 3679999999999999999987641 0134799999998864 56788888763 46655555554443
Q ss_pred CccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEE
Q 021161 117 GCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFI 164 (316)
Q Consensus 117 ~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV 164 (316)
..==+.|||...+-.|....++.++.. .++-+.....|+|--.++
T Consensus 130 -~~~iLLISDIRS~r~~~ep~t~~ll~D--y~lQ~~w~~~LkP~aS~L 174 (307)
T 3mag_A 130 -PSKIILISDVRSKRGGNEPSTADLLSN--YALQNVMISILNPVASSL 174 (307)
T ss_dssp -TSCEEEEECCCC------CCHHHHHHH--HHHHHHHHHHHCCSEEEE
T ss_pred -CCCEEEEEEecCCCCCCCccHHHHHHH--HHHHHHHHHHhhhHHHhc
Confidence 233466788654322222122222211 223344556888875544
No 405
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=87.64 E-value=3.8 Score=36.16 Aligned_cols=77 Identities=17% Similarity=0.085 Sum_probs=51.9
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----------------------CCCCcEEE
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------------------PIEGVIQV 98 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----------------------~i~gV~~i 98 (316)
.+++||=-|+ .|+.-..+++++.. .+.+|+.+|..... .-..+.++
T Consensus 12 ~gk~vlVTGa-s~gIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (278)
T 3sx2_A 12 TGKVAFITGA-ARGQGRAHAVRLAA-----------DGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVAR 79 (278)
T ss_dssp TTCEEEEEST-TSHHHHHHHHHHHH-----------TTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCCEEEEECC-CChHHHHHHHHHHH-----------CCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEE
Confidence 3567777775 56777888877742 35789999987310 01357889
Q ss_pred ecCccChhhHHHHHhhcC--CccccEEEeCCCC
Q 021161 99 QGDITNARTAEVVIRHFD--GCKADLVVCDGAP 129 (316)
Q Consensus 99 ~gDIt~~~t~~~I~~~~~--~~~~DlVvsDgap 129 (316)
++|+++...++.+.+... -+++|+||.+.+.
T Consensus 80 ~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~ 112 (278)
T 3sx2_A 80 QADVRDRESLSAALQAGLDELGRLDIVVANAGI 112 (278)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHCCCCEEEECCCC
T ss_pred eCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 999999887665544221 1379999999754
No 406
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=87.43 E-value=0.75 Score=42.21 Aligned_cols=93 Identities=19% Similarity=0.022 Sum_probs=57.3
Q ss_pred cCCCCeEEEECCC--CCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----CCCCcEEEecCccChhhHHHH
Q 021161 39 FEGVKRVVDLCAA--PGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----PIEGVIQVQGDITNARTAEVV 111 (316)
Q Consensus 39 ~~~~~rVLDLcag--PG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----~i~gV~~i~gDIt~~~t~~~I 111 (316)
++++.+||-.||+ -|.....+++.. +.+|+++|.++.. .--|...+ -|..+....+.+
T Consensus 147 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~--------------Ga~Vi~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~ 211 (336)
T 4b7c_A 147 PKNGETVVISGAAGAVGSVAGQIARLK--------------GCRVVGIAGGAEKCRFLVEELGFDGA-IDYKNEDLAAGL 211 (336)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT--------------TCEEEEEESSHHHHHHHHHTTCCSEE-EETTTSCHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHC--------------CCEEEEEeCCHHHHHHHHHHcCCCEE-EECCCHHHHHHH
Confidence 5788999998873 233333344443 3699999987631 11233211 244444555556
Q ss_pred HhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEE
Q 021161 112 IRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (316)
Q Consensus 112 ~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~ 165 (316)
.+.. ++.+|+|+.. .|. ..+..+.++|++||+++.
T Consensus 212 ~~~~-~~~~d~vi~~-----~g~-------------~~~~~~~~~l~~~G~iv~ 246 (336)
T 4b7c_A 212 KREC-PKGIDVFFDN-----VGG-------------EILDTVLTRIAFKARIVL 246 (336)
T ss_dssp HHHC-TTCEEEEEES-----SCH-------------HHHHHHHTTEEEEEEEEE
T ss_pred HHhc-CCCceEEEEC-----CCc-------------chHHHHHHHHhhCCEEEE
Confidence 5554 4579999864 331 135677899999999987
No 407
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=87.23 E-value=0.76 Score=40.60 Aligned_cols=113 Identities=12% Similarity=0.124 Sum_probs=67.2
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC--C----C-CCcEEEecCccChhhHHHHHh
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--P----I-EGVIQVQGDITNARTAEVVIR 113 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~--~----i-~gV~~i~gDIt~~~t~~~I~~ 113 (316)
.+++||=.|++ |+.-..+++++.. .+.+|+.+|.++.. . + ..+.++++|+++....+.+.+
T Consensus 7 ~gk~~lVTGas-~gIG~a~a~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 74 (255)
T 4eso_A 7 QGKKAIVIGGT-HGMGLATVRRLVE-----------GGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGA 74 (255)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHH
Confidence 35677777755 6678888887742 35789999987632 0 1 357889999999876665443
Q ss_pred hcC--CccccEEEeCCCCCC-CCCCCcc--HH---HHHHHH--HHHHHHHHHcccCCcEEEE
Q 021161 114 HFD--GCKADLVVCDGAPDV-TGLHDMD--EF---VQSQLI--LAGLTVVTHVLKEGGKFIA 165 (316)
Q Consensus 114 ~~~--~~~~DlVvsDgapdv-tG~~~~d--e~---~~~~L~--~aaL~~a~~vLkpGG~fV~ 165 (316)
... -+++|+++.+.+... ....+.+ ++ +...+. ...++.+...++.+|++|.
T Consensus 75 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~ 136 (255)
T 4eso_A 75 AAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVF 136 (255)
T ss_dssp HHHHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEE
T ss_pred HHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEE
Confidence 221 137999999865322 1122222 11 111111 2234455566677888876
No 408
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=87.05 E-value=5.4 Score=35.30 Aligned_cols=76 Identities=17% Similarity=0.142 Sum_probs=51.8
Q ss_pred CCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCC----CCCCCcEEEecCccChhhHHHHHhhcC-
Q 021161 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM----APIEGVIQVQGDITNARTAEVVIRHFD- 116 (316)
Q Consensus 42 ~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~----~~i~gV~~i~gDIt~~~t~~~I~~~~~- 116 (316)
+++||=-|++ |+.-..+++++.. .+.+|+.++.++. ....++.++++|+++...++.+.+...
T Consensus 16 ~k~vlVTGas-~gIG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 83 (266)
T 3p19_A 16 KKLVVITGAS-SGIGEAIARRFSE-----------EGHPLLLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAITRAEK 83 (266)
T ss_dssp CCEEEEESTT-SHHHHHHHHHHHH-----------TTCCEEEEESCHHHHHTTCCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCC-CHHHHHHHHHHHH-----------CCCEEEEEECCHHHHHHhhcCCceEEEecCCCHHHHHHHHHHHHH
Confidence 4567777754 6788888887742 3468999988752 123478889999999876655443221
Q ss_pred -CccccEEEeCCCC
Q 021161 117 -GCKADLVVCDGAP 129 (316)
Q Consensus 117 -~~~~DlVvsDgap 129 (316)
.+.+|+||.+.+.
T Consensus 84 ~~g~iD~lvnnAg~ 97 (266)
T 3p19_A 84 IYGPADAIVNNAGM 97 (266)
T ss_dssp HHCSEEEEEECCCC
T ss_pred HCCCCCEEEECCCc
Confidence 1379999998754
No 409
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=87.00 E-value=11 Score=33.59 Aligned_cols=77 Identities=9% Similarity=0.069 Sum_probs=52.5
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC--C---------------CCCcEEEecCcc
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--P---------------IEGVIQVQGDIT 103 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~--~---------------i~gV~~i~gDIt 103 (316)
.+++||=.|++ |++-..+++++.. .+.+|+.++.++.. . -..+.++++|++
T Consensus 8 ~~k~vlVTGas-~GIG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~ 75 (285)
T 3sc4_A 8 RGKTMFISGGS-RGIGLAIAKRVAA-----------DGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIR 75 (285)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHT-----------TTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTT
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHH-----------CCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCC
Confidence 35677777765 6688888888742 35789999988642 1 124788999999
Q ss_pred ChhhHHHHHhhcC--CccccEEEeCCCC
Q 021161 104 NARTAEVVIRHFD--GCKADLVVCDGAP 129 (316)
Q Consensus 104 ~~~t~~~I~~~~~--~~~~DlVvsDgap 129 (316)
+...++.+.+.+. -++.|++|.+.+.
T Consensus 76 ~~~~v~~~~~~~~~~~g~id~lvnnAg~ 103 (285)
T 3sc4_A 76 DGDAVAAAVAKTVEQFGGIDICVNNASA 103 (285)
T ss_dssp SHHHHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 9876655544321 1379999998653
No 410
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=86.89 E-value=0.42 Score=43.88 Aligned_cols=95 Identities=17% Similarity=0.134 Sum_probs=59.0
Q ss_pred cCCCCeEEEECC-C-CCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----CCCCcEEEecCccChhhHHHHH
Q 021161 39 FEGVKRVVDLCA-A-PGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNARTAEVVI 112 (316)
Q Consensus 39 ~~~~~rVLDLca-g-PG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----~i~gV~~i~gDIt~~~t~~~I~ 112 (316)
++++.+||=.|+ | -|.....+++..+ .+|+++|.++.. .--|... .-|..+....+.+.
T Consensus 138 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~G--------------a~Vi~~~~~~~~~~~~~~~Ga~~-~~~~~~~~~~~~~~ 202 (325)
T 3jyn_A 138 VKPGEIILFHAAAGGVGSLACQWAKALG--------------AKLIGTVSSPEKAAHAKALGAWE-TIDYSHEDVAKRVL 202 (325)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHT--------------CEEEEEESSHHHHHHHHHHTCSE-EEETTTSCHHHHHH
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCC--------------CEEEEEeCCHHHHHHHHHcCCCE-EEeCCCccHHHHHH
Confidence 478899998884 2 2444444455543 689999987632 0012211 11344445556666
Q ss_pred hhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEE
Q 021161 113 RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (316)
Q Consensus 113 ~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~K 166 (316)
+...+..+|+|+.. .|. + .+..+.++|++||+++.-
T Consensus 203 ~~~~~~g~Dvvid~-----~g~---~----------~~~~~~~~l~~~G~iv~~ 238 (325)
T 3jyn_A 203 ELTDGKKCPVVYDG-----VGQ---D----------TWLTSLDSVAPRGLVVSF 238 (325)
T ss_dssp HHTTTCCEEEEEES-----SCG---G----------GHHHHHTTEEEEEEEEEC
T ss_pred HHhCCCCceEEEEC-----CCh---H----------HHHHHHHHhcCCCEEEEE
Confidence 66666789999953 332 1 245678999999999974
No 411
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=86.81 E-value=1.8 Score=38.50 Aligned_cols=78 Identities=8% Similarity=-0.020 Sum_probs=53.3
Q ss_pred CCCeEEEECCCC-CHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC--------CCCCcEEEecCccChhhHHHH
Q 021161 41 GVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------PIEGVIQVQGDITNARTAEVV 111 (316)
Q Consensus 41 ~~~rVLDLcagP-G~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~--------~i~gV~~i~gDIt~~~t~~~I 111 (316)
.+++||=.|++. +|.-..+++++.. .+.+|+.++..... ...++.++++|+++...++.+
T Consensus 25 ~~k~vlVTGasg~~GIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~ 93 (280)
T 3nrc_A 25 AGKKILITGLLSNKSIAYGIAKAMHR-----------EGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDL 93 (280)
T ss_dssp TTCEEEECCCCSTTCHHHHHHHHHHH-----------TTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHH
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHH-----------cCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHH
Confidence 356788888653 4577777777641 34789999988721 234688999999998876655
Q ss_pred HhhcC--CccccEEEeCCCC
Q 021161 112 IRHFD--GCKADLVVCDGAP 129 (316)
Q Consensus 112 ~~~~~--~~~~DlVvsDgap 129 (316)
.+... .+++|+||.+.+.
T Consensus 94 ~~~~~~~~g~id~li~nAg~ 113 (280)
T 3nrc_A 94 FVELGKVWDGLDAIVHSIAF 113 (280)
T ss_dssp HHHHHHHCSSCCEEEECCCC
T ss_pred HHHHHHHcCCCCEEEECCcc
Confidence 54321 1479999998753
No 412
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=86.72 E-value=1.3 Score=41.49 Aligned_cols=90 Identities=18% Similarity=0.109 Sum_probs=53.3
Q ss_pred cCCCCeEEEECCCC-CHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCC----CCCcEEEecCccChhhHHHHHh
Q 021161 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITNARTAEVVIR 113 (316)
Q Consensus 39 ~~~~~rVLDLcagP-G~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~----i~gV~~i~gDIt~~~t~~~I~~ 113 (316)
++++.+||-+|+|+ |.+...+++.++ ++|+++|.++... --|...+ -|..+....+
T Consensus 192 ~~~g~~VlV~GaG~vG~~aiqlak~~G--------------a~Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~~~~---- 252 (369)
T 1uuf_A 192 AGPGKKVGVVGIGGLGHMGIKLAHAMG--------------AHVVAFTTSEAKREAAKALGADEV-VNSRNADEMA---- 252 (369)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESSGGGHHHHHHHTCSEE-EETTCHHHHH----
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCC--------------CEEEEEeCCHHHHHHHHHcCCcEE-eccccHHHHH----
Confidence 46889999999865 445555565543 6899999876421 0132211 1233322221
Q ss_pred hcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEE
Q 021161 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (316)
Q Consensus 114 ~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~ 165 (316)
.+. ..+|+|+- ++|... .+..+.++|++||+++.
T Consensus 253 ~~~-~g~Dvvid-----~~g~~~------------~~~~~~~~l~~~G~iv~ 286 (369)
T 1uuf_A 253 AHL-KSFDFILN-----TVAAPH------------NLDDFTTLLKRDGTMTL 286 (369)
T ss_dssp TTT-TCEEEEEE-----CCSSCC------------CHHHHHTTEEEEEEEEE
T ss_pred Hhh-cCCCEEEE-----CCCCHH------------HHHHHHHHhccCCEEEE
Confidence 222 47999984 333211 14567889999999986
No 413
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=86.61 E-value=3.5 Score=36.49 Aligned_cols=77 Identities=22% Similarity=0.088 Sum_probs=52.6
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCC-------CCCcEEEecCccChhhHHHHHh
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-------IEGVIQVQGDITNARTAEVVIR 113 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~-------i~gV~~i~gDIt~~~t~~~I~~ 113 (316)
.+++||=.|+ .|++-..+++++.. .+.+|+.+|.++... -.++.++++|+++....+.+.+
T Consensus 10 ~~k~vlVTGa-s~gIG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 77 (271)
T 3tzq_B 10 ENKVAIITGA-CGGIGLETSRVLAR-----------AGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALID 77 (271)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHH-----------TTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHH-----------CCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHH
Confidence 3567777775 46778888887742 357899999887431 1357889999999876655543
Q ss_pred hcC--CccccEEEeCCCC
Q 021161 114 HFD--GCKADLVVCDGAP 129 (316)
Q Consensus 114 ~~~--~~~~DlVvsDgap 129 (316)
... -+++|+|+.+.+.
T Consensus 78 ~~~~~~g~id~lv~nAg~ 95 (271)
T 3tzq_B 78 FTIDTFGRLDIVDNNAAH 95 (271)
T ss_dssp HHHHHHSCCCEEEECCCC
T ss_pred HHHHHcCCCCEEEECCCC
Confidence 221 1379999998753
No 414
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=86.58 E-value=0.96 Score=41.48 Aligned_cols=95 Identities=19% Similarity=0.072 Sum_probs=57.4
Q ss_pred cCCCCeEEEECC--CCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-C-C--CCcEEEecCccChhhHHHHH
Q 021161 39 FEGVKRVVDLCA--APGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-P-I--EGVIQVQGDITNARTAEVVI 112 (316)
Q Consensus 39 ~~~~~rVLDLca--gPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-~-i--~gV~~i~gDIt~~~t~~~I~ 112 (316)
++++.+||=.|+ |-|.....+++.. +.+|+++|.++.. . . -|... ..|.++....+.+.
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~--------------G~~Vi~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~i~ 207 (333)
T 1wly_A 143 VKPGDYVLIHAAAGGMGHIMVPWARHL--------------GATVIGTVSTEEKAETARKLGCHH-TINYSTQDFAEVVR 207 (333)
T ss_dssp CCTTCEEEETTTTSTTHHHHHHHHHHT--------------TCEEEEEESSHHHHHHHHHHTCSE-EEETTTSCHHHHHH
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHC--------------CCEEEEEeCCHHHHHHHHHcCCCE-EEECCCHHHHHHHH
Confidence 467899999886 2333333334433 3689999988631 0 0 12221 12555555555566
Q ss_pred hhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEE
Q 021161 113 RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (316)
Q Consensus 113 ~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~K 166 (316)
+...+..+|+|+... |.. .+..+..+|++||+++.-
T Consensus 208 ~~~~~~~~d~vi~~~-----g~~-------------~~~~~~~~l~~~G~iv~~ 243 (333)
T 1wly_A 208 EITGGKGVDVVYDSI-----GKD-------------TLQKSLDCLRPRGMCAAY 243 (333)
T ss_dssp HHHTTCCEEEEEECS-----CTT-------------THHHHHHTEEEEEEEEEC
T ss_pred HHhCCCCCeEEEECC-----cHH-------------HHHHHHHhhccCCEEEEE
Confidence 555556799999643 321 145678899999999873
No 415
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=86.54 E-value=1.8 Score=37.69 Aligned_cols=77 Identities=12% Similarity=0.020 Sum_probs=53.3
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCC-------CCCcEEEecCccChhhHHHHHh
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-------IEGVIQVQGDITNARTAEVVIR 113 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~-------i~gV~~i~gDIt~~~t~~~I~~ 113 (316)
.+++||=.|+ .|+.-..+++++.. .+.+|+.++..+... -..+.++++|+++...++.+.+
T Consensus 11 ~~k~vlVTGa-sggiG~~~a~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~ 78 (265)
T 2o23_A 11 KGLVAVITGG-ASGLGLATAERLVG-----------QGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALA 78 (265)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHH-----------TTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECC-CChHHHHHHHHHHH-----------CCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHH
Confidence 3567887776 57888888888742 347899999886421 1357889999999876655443
Q ss_pred hcC--CccccEEEeCCCC
Q 021161 114 HFD--GCKADLVVCDGAP 129 (316)
Q Consensus 114 ~~~--~~~~DlVvsDgap 129 (316)
... .+++|+||.+.+.
T Consensus 79 ~~~~~~g~id~li~~Ag~ 96 (265)
T 2o23_A 79 LAKGKFGRVDVAVNCAGI 96 (265)
T ss_dssp HHHHHHSCCCEEEECCCC
T ss_pred HHHHHCCCCCEEEECCcc
Confidence 221 1369999998653
No 416
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=86.47 E-value=1.6 Score=39.36 Aligned_cols=114 Identities=9% Similarity=0.077 Sum_probs=68.0
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC------------CCCCcEEEecCccChhhH
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------------PIEGVIQVQGDITNARTA 108 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~------------~i~gV~~i~gDIt~~~t~ 108 (316)
.+++||=.|+ .|++-..+++++.. .+.+|+.+|..... .-..+.++++|+++...+
T Consensus 48 ~~k~vlVTGa-s~GIG~aia~~la~-----------~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v 115 (294)
T 3r3s_A 48 KDRKALVTGG-DSGIGRAAAIAYAR-----------EGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFA 115 (294)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHH-----------TTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHH-----------CCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHH
Confidence 3567887775 57788888887742 35788888876321 013578889999998766
Q ss_pred HHHHhhcC--CccccEEEeCCCCCC--CCCCCccH--H---HHHHHH--HHHHHHHHHcccCCcEEEEE
Q 021161 109 EVVIRHFD--GCKADLVVCDGAPDV--TGLHDMDE--F---VQSQLI--LAGLTVVTHVLKEGGKFIAK 166 (316)
Q Consensus 109 ~~I~~~~~--~~~~DlVvsDgapdv--tG~~~~de--~---~~~~L~--~aaL~~a~~vLkpGG~fV~K 166 (316)
+.+.+... -+.+|+||.+.+... ..+.+.+. + +...+. ...++.+...++.+|++|.-
T Consensus 116 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~i 184 (294)
T 3r3s_A 116 RSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITT 184 (294)
T ss_dssp HHHHHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEE
T ss_pred HHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEE
Confidence 55443221 137999999875321 11222221 1 111111 23345556677888998863
No 417
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=86.42 E-value=1.2 Score=41.66 Aligned_cols=92 Identities=16% Similarity=0.128 Sum_probs=55.9
Q ss_pred CCCeEEEEC-CCC-CHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----CCCCcEEEecCccChhhHHHHHhh
Q 021161 41 GVKRVVDLC-AAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNARTAEVVIRH 114 (316)
Q Consensus 41 ~~~rVLDLc-agP-G~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----~i~gV~~i~gDIt~~~t~~~I~~~ 114 (316)
++.+||=.| +|+ |.+...+++.+. +.+|+++|.++.. .--|...+. |..+ ...+.+.+.
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~-------------g~~Vi~~~~~~~~~~~~~~lGad~vi-~~~~-~~~~~v~~~ 235 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRT-------------DLTVIATASRPETQEWVKSLGAHHVI-DHSK-PLAAEVAAL 235 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHC-------------CSEEEEECSSHHHHHHHHHTTCSEEE-CTTS-CHHHHHHTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhc-------------CCEEEEEeCCHHHHHHHHHcCCCEEE-eCCC-CHHHHHHHh
Confidence 678999888 443 555555666542 3699999987631 112332111 2222 233445443
Q ss_pred cCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEE
Q 021161 115 FDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (316)
Q Consensus 115 ~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~ 165 (316)
.++.+|+|+- ++|. ...+..+.++|++||+++.
T Consensus 236 -~~~g~Dvvid-----~~g~------------~~~~~~~~~~l~~~G~iv~ 268 (363)
T 4dvj_A 236 -GLGAPAFVFS-----TTHT------------DKHAAEIADLIAPQGRFCL 268 (363)
T ss_dssp -CSCCEEEEEE-----CSCH------------HHHHHHHHHHSCTTCEEEE
T ss_pred -cCCCceEEEE-----CCCc------------hhhHHHHHHHhcCCCEEEE
Confidence 5678999984 3331 1346778899999999997
No 418
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=86.33 E-value=4.5 Score=34.13 Aligned_cols=70 Identities=20% Similarity=0.130 Sum_probs=51.5
Q ss_pred CeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC--CC-CCcEEEecCccChhhHHHHHhhcCCcc
Q 021161 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--PI-EGVIQVQGDITNARTAEVVIRHFDGCK 119 (316)
Q Consensus 43 ~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~--~i-~gV~~i~gDIt~~~t~~~I~~~~~~~~ 119 (316)
++||=.| |+|.....+++.+.. .+.+|++++..+.. .+ .++.++++|+++.+.+..+. . .
T Consensus 5 ~~ilItG-atG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~---~--~ 67 (227)
T 3dhn_A 5 KKIVLIG-ASGFVGSALLNEALN-----------RGFEVTAVVRHPEKIKIENEHLKVKKADVSSLDEVCEVC---K--G 67 (227)
T ss_dssp CEEEEET-CCHHHHHHHHHHHHT-----------TTCEEEEECSCGGGCCCCCTTEEEECCCTTCHHHHHHHH---T--T
T ss_pred CEEEEEc-CCchHHHHHHHHHHH-----------CCCEEEEEEcCcccchhccCceEEEEecCCCHHHHHHHh---c--C
Confidence 5677665 568888898888742 24789999988642 22 68999999999987665543 3 4
Q ss_pred ccEEEeCCCC
Q 021161 120 ADLVVCDGAP 129 (316)
Q Consensus 120 ~DlVvsDgap 129 (316)
+|.|+...++
T Consensus 68 ~d~vi~~a~~ 77 (227)
T 3dhn_A 68 ADAVISAFNP 77 (227)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEEeCcC
Confidence 8999987654
No 419
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=86.26 E-value=3.5 Score=37.54 Aligned_cols=72 Identities=24% Similarity=0.162 Sum_probs=52.7
Q ss_pred CCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCC---------CCCcEEEecCccChhhHHHHH
Q 021161 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP---------IEGVIQVQGDITNARTAEVVI 112 (316)
Q Consensus 42 ~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~---------i~gV~~i~gDIt~~~t~~~I~ 112 (316)
+++||=.| |+|....++++.+.. .+.+|++++..+... ..++.++++|+++...+..+.
T Consensus 9 ~~~vlVtG-atG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~ 76 (357)
T 1rkx_A 9 GKRVFVTG-HTGFKGGWLSLWLQT-----------MGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESI 76 (357)
T ss_dssp TCEEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHH
T ss_pred CCEEEEEC-CCchHHHHHHHHHHh-----------CCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHH
Confidence 56788776 678899999888741 246899999876421 247899999999987665554
Q ss_pred hhcCCccccEEEeCCC
Q 021161 113 RHFDGCKADLVVCDGA 128 (316)
Q Consensus 113 ~~~~~~~~DlVvsDga 128 (316)
+.. .+|+|+..++
T Consensus 77 ~~~---~~d~vih~A~ 89 (357)
T 1rkx_A 77 REF---QPEIVFHMAA 89 (357)
T ss_dssp HHH---CCSEEEECCS
T ss_pred Hhc---CCCEEEECCC
Confidence 322 5899998765
No 420
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=86.19 E-value=1.4 Score=38.67 Aligned_cols=77 Identities=13% Similarity=0.079 Sum_probs=52.1
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC------C-CCCcEEEecCccChhhHHHHHh
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------P-IEGVIQVQGDITNARTAEVVIR 113 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~------~-i~gV~~i~gDIt~~~t~~~I~~ 113 (316)
.+++||=.| |.|+.-..+++++.. .+.+|+.+|.++.. . -..+.++++|+++....+.+.+
T Consensus 7 ~~k~vlVTG-as~gIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~ 74 (259)
T 4e6p_A 7 EGKSALITG-SARGIGRAFAEAYVR-----------EGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIA 74 (259)
T ss_dssp TTCEEEEET-CSSHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHH
Confidence 356777777 457788888887742 35789999987531 1 1357889999999876555443
Q ss_pred hc--CCccccEEEeCCCC
Q 021161 114 HF--DGCKADLVVCDGAP 129 (316)
Q Consensus 114 ~~--~~~~~DlVvsDgap 129 (316)
.. .-+.+|+||.+.+.
T Consensus 75 ~~~~~~g~id~lv~~Ag~ 92 (259)
T 4e6p_A 75 ATVEHAGGLDILVNNAAL 92 (259)
T ss_dssp HHHHHSSSCCEEEECCCC
T ss_pred HHHHHcCCCCEEEECCCc
Confidence 21 11379999999753
No 421
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=86.10 E-value=3.7 Score=35.45 Aligned_cols=75 Identities=12% Similarity=0.085 Sum_probs=54.2
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC------C-CCCcEEEecCccChhhHHHHH
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------P-IEGVIQVQGDITNARTAEVVI 112 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~------~-i~gV~~i~gDIt~~~t~~~I~ 112 (316)
..+++||=.|+ .|++-..+++++.. .+.+|+.++.++.. . -..+.++.+|+++...+..+.
T Consensus 12 ~~~k~vlVTGa-s~gIG~~~a~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 79 (249)
T 3f9i_A 12 LTGKTSLITGA-SSGIGSAIARLLHK-----------LGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLI 79 (249)
T ss_dssp CTTCEEEETTT-TSHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHH
T ss_pred CCCCEEEEECC-CChHHHHHHHHHHH-----------CCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHH
Confidence 35677776665 56778888877641 34789999987631 1 246788899999988877776
Q ss_pred hhcCCccccEEEeCCC
Q 021161 113 RHFDGCKADLVVCDGA 128 (316)
Q Consensus 113 ~~~~~~~~DlVvsDga 128 (316)
+.+ ..+|+|+.+.+
T Consensus 80 ~~~--~~id~li~~Ag 93 (249)
T 3f9i_A 80 SKT--SNLDILVCNAG 93 (249)
T ss_dssp HTC--SCCSEEEECCC
T ss_pred Hhc--CCCCEEEECCC
Confidence 655 47999999875
No 422
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=86.02 E-value=0.77 Score=42.18 Aligned_cols=93 Identities=17% Similarity=0.168 Sum_probs=57.3
Q ss_pred cCCCCeEEEECCCCCHHHHH---HHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----CCCCcEEEecCccChhhHHHH
Q 021161 39 FEGVKRVVDLCAAPGSWSQV---LSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNARTAEVV 111 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~---La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----~i~gV~~i~gDIt~~~t~~~I 111 (316)
++++.+||=.|++ |+..+. +++.. +.+|+++|.++.. .--|...+ -|..+.+..+.+
T Consensus 146 ~~~g~~vlV~Ga~-g~iG~~~~~~a~~~--------------Ga~Vi~~~~~~~~~~~~~~~ga~~~-~~~~~~~~~~~~ 209 (334)
T 3qwb_A 146 VKKGDYVLLFAAA-GGVGLILNQLLKMK--------------GAHTIAVASTDEKLKIAKEYGAEYL-INASKEDILRQV 209 (334)
T ss_dssp CCTTCEEEESSTT-BHHHHHHHHHHHHT--------------TCEEEEEESSHHHHHHHHHTTCSEE-EETTTSCHHHHH
T ss_pred CCCCCEEEEECCC-CHHHHHHHHHHHHC--------------CCEEEEEeCCHHHHHHHHHcCCcEE-EeCCCchHHHHH
Confidence 4788999999842 334433 34433 3699999987631 01132211 134444555566
Q ss_pred HhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEE
Q 021161 112 IRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (316)
Q Consensus 112 ~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~ 165 (316)
.+...+..+|+|+.. .|. + .+..+..+|++||++|.
T Consensus 210 ~~~~~~~g~D~vid~-----~g~---~----------~~~~~~~~l~~~G~iv~ 245 (334)
T 3qwb_A 210 LKFTNGKGVDASFDS-----VGK---D----------TFEISLAALKRKGVFVS 245 (334)
T ss_dssp HHHTTTSCEEEEEEC-----CGG---G----------GHHHHHHHEEEEEEEEE
T ss_pred HHHhCCCCceEEEEC-----CCh---H----------HHHHHHHHhccCCEEEE
Confidence 666666789999954 332 1 24567889999999987
No 423
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=86.02 E-value=2.4 Score=38.18 Aligned_cols=71 Identities=13% Similarity=-0.009 Sum_probs=49.8
Q ss_pred CCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCC--C--CCcEEEecCccChhhHHHHHhhcCC
Q 021161 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--I--EGVIQVQGDITNARTAEVVIRHFDG 117 (316)
Q Consensus 42 ~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~--i--~gV~~i~gDIt~~~t~~~I~~~~~~ 117 (316)
.++||=.| |+|.....+++.+.. .+.+|++++..+... + .+++++++|+++...+..+ +.
T Consensus 13 ~M~ilVtG-atG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~---~~- 76 (342)
T 2x4g_A 13 HVKYAVLG-ATGLLGHHAARAIRA-----------AGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERA---LR- 76 (342)
T ss_dssp CCEEEEES-TTSHHHHHHHHHHHH-----------TTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHH---TT-
T ss_pred CCEEEEEC-CCcHHHHHHHHHHHH-----------CCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHH---Hc-
Confidence 35788777 568899999887741 246899999876431 2 2789999999998765443 43
Q ss_pred ccccEEEeCCCC
Q 021161 118 CKADLVVCDGAP 129 (316)
Q Consensus 118 ~~~DlVvsDgap 129 (316)
.+|.|+...+.
T Consensus 77 -~~d~vih~a~~ 87 (342)
T 2x4g_A 77 -GLDGVIFSAGY 87 (342)
T ss_dssp -TCSEEEEC---
T ss_pred -CCCEEEECCcc
Confidence 49999988653
No 424
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=85.88 E-value=0.58 Score=42.81 Aligned_cols=96 Identities=13% Similarity=0.013 Sum_probs=57.6
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-C---CCCcEEEecCccChhhHHHHHhh
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-P---IEGVIQVQGDITNARTAEVVIRH 114 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-~---i~gV~~i~gDIt~~~t~~~I~~~ 114 (316)
++++.+||-.|++ |+..+.+.+.... .+.+|+++|.++.. . --|... ..|.++....+.+.+.
T Consensus 138 ~~~g~~vlV~Ga~-ggiG~~~~~~a~~-----------~G~~V~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~ 204 (327)
T 1qor_A 138 IKPDEQFLFHAAA-GGVGLIACQWAKA-----------LGAKLIGTVGTAQKAQSALKAGAWQ-VINYREEDLVERLKEI 204 (327)
T ss_dssp CCTTCEEEESSTT-BHHHHHHHHHHHH-----------HTCEEEEEESSHHHHHHHHHHTCSE-EEETTTSCHHHHHHHH
T ss_pred CCCCCEEEEECCC-CHHHHHHHHHHHH-----------cCCEEEEEeCCHHHHHHHHHcCCCE-EEECCCccHHHHHHHH
Confidence 4678999999853 4444444333210 13689999987531 0 013221 1255555555566665
Q ss_pred cCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEE
Q 021161 115 FDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (316)
Q Consensus 115 ~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~ 165 (316)
..+..+|+|+... |- ..+..+.++|++||+++.
T Consensus 205 ~~~~~~D~vi~~~-----g~-------------~~~~~~~~~l~~~G~iv~ 237 (327)
T 1qor_A 205 TGGKKVRVVYDSV-----GR-------------DTWERSLDCLQRRGLMVS 237 (327)
T ss_dssp TTTCCEEEEEECS-----CG-------------GGHHHHHHTEEEEEEEEE
T ss_pred hCCCCceEEEECC-----ch-------------HHHHHHHHHhcCCCEEEE
Confidence 5556799999653 31 124567889999999987
No 425
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=85.88 E-value=2.9 Score=36.95 Aligned_cols=76 Identities=12% Similarity=0.048 Sum_probs=52.2
Q ss_pred CCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCC-----CCCcEEEecCccChhhHHHHHhhcC
Q 021161 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-----IEGVIQVQGDITNARTAEVVIRHFD 116 (316)
Q Consensus 42 ~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~-----i~gV~~i~gDIt~~~t~~~I~~~~~ 116 (316)
+++||=.|+ .|+.-..+++++.. .+.+|+.+|..+... -.++.++++|+++...++.+.+...
T Consensus 27 ~k~vlVTGa-s~gIG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 94 (260)
T 3gem_A 27 SAPILITGA-SQRVGLHCALRLLE-----------HGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLK 94 (260)
T ss_dssp CCCEEESST-TSHHHHHHHHHHHH-----------TTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEECC-CCHHHHHHHHHHHH-----------CCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHH
Confidence 456776664 57788888887742 246899999877421 1268899999999886665544321
Q ss_pred --CccccEEEeCCCC
Q 021161 117 --GCKADLVVCDGAP 129 (316)
Q Consensus 117 --~~~~DlVvsDgap 129 (316)
.+++|+||.+.+.
T Consensus 95 ~~~g~iD~lv~nAg~ 109 (260)
T 3gem_A 95 TQTSSLRAVVHNASE 109 (260)
T ss_dssp HHCSCCSEEEECCCC
T ss_pred HhcCCCCEEEECCCc
Confidence 1479999999754
No 426
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=85.81 E-value=0.74 Score=49.53 Aligned_cols=109 Identities=14% Similarity=0.155 Sum_probs=62.6
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC------CCCCcEEEecCccChhhHH---HH
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAE---VV 111 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~------~i~gV~~i~gDIt~~~t~~---~I 111 (316)
...+++||.||.||++.-+.+... .-.|.|+|+.+.+ ..++...+.+||.+..... .|
T Consensus 539 ~~l~~iDLFaG~GGlslGl~~AG~-------------~~vv~avEid~~A~~ty~~N~p~~~~~~~DI~~l~~~~~~~di 605 (1002)
T 3swr_A 539 PKLRTLDVFSGCGGLSEGFHQAGI-------------SDTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLVMAGET 605 (1002)
T ss_dssp CCEEEEEESCTTSHHHHHHHHHTS-------------EEEEEEECSSHHHHHHHHHHCTTSEEECSCHHHHHHHHHHTCS
T ss_pred CCCeEEEeccCccHHHHHHHHCCC-------------CceEEEEECCHHHHHHHHHhCCCCccccccHHHHhhhccchhh
Confidence 346999999999999998866421 0147799999864 3577888888986532100 00
Q ss_pred Hh----hc-CCccccEEEeCCCCCCCCCCCcc---H----HHHHHHHHHHHHHHHHcccCCcEEEEE
Q 021161 112 IR----HF-DGCKADLVVCDGAPDVTGLHDMD---E----FVQSQLILAGLTVVTHVLKEGGKFIAK 166 (316)
Q Consensus 112 ~~----~~-~~~~~DlVvsDgapdvtG~~~~d---e----~~~~~L~~aaL~~a~~vLkpGG~fV~K 166 (316)
.+ .+ ..+.+|+|+.. |.|+|..... . .....|....+.++ ..++|- .|++.
T Consensus 606 ~~~~~~~lp~~~~vDll~GG--pPCQ~FS~ag~~~~~~~~d~R~~L~~~~~riv-~~~rPk-~~llE 668 (1002)
T 3swr_A 606 TNSRGQRLPQKGDVEMLCGG--PPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYC-DYYRPR-FFLLE 668 (1002)
T ss_dssp BCTTCCBCCCTTTCSEEEEC--CCCTTCCSSSCCCHHHHHHHTTSHHHHHHHHH-HHHCCS-EEEEE
T ss_pred hhhhhhhcccCCCeeEEEEc--CCCcchhhhCCCCCCcccchhhHHHHHHHHHH-HHhCCC-EEEEe
Confidence 00 11 12468999863 4455543211 0 01123555555444 456776 34443
No 427
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=85.80 E-value=0.83 Score=42.26 Aligned_cols=96 Identities=17% Similarity=0.193 Sum_probs=56.2
Q ss_pred cCCCCeEEEECCC--CCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-C-C--CCcEEEecCccChhhHHHHH
Q 021161 39 FEGVKRVVDLCAA--PGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-P-I--EGVIQVQGDITNARTAEVVI 112 (316)
Q Consensus 39 ~~~~~rVLDLcag--PG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-~-i--~gV~~i~gDIt~~~t~~~I~ 112 (316)
++++.+||-.|+| -|.....+++... +.+|+++|.++.. . . -|...+ .|.++....+.+.
T Consensus 168 ~~~g~~vlV~Gagg~iG~~~~~~a~~~~-------------Ga~Vi~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~ 233 (347)
T 1jvb_A 168 LDPTKTLLVVGAGGGLGTMAVQIAKAVS-------------GATIIGVDVREEAVEAAKRAGADYV-INASMQDPLAEIR 233 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHT-------------CCEEEEEESSHHHHHHHHHHTCSEE-EETTTSCHHHHHH
T ss_pred CCCCCEEEEECCCccHHHHHHHHHHHcC-------------CCeEEEEcCCHHHHHHHHHhCCCEE-ecCCCccHHHHHH
Confidence 4688999999986 3333333444441 3689999987632 0 0 122111 1344444444444
Q ss_pred hhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEE
Q 021161 113 RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (316)
Q Consensus 113 ~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~ 165 (316)
+....+.+|+|+... |. ...+..+.++|++||+++.
T Consensus 234 ~~~~~~~~d~vi~~~-----g~------------~~~~~~~~~~l~~~G~iv~ 269 (347)
T 1jvb_A 234 RITESKGVDAVIDLN-----NS------------EKTLSVYPKALAKQGKYVM 269 (347)
T ss_dssp HHTTTSCEEEEEESC-----CC------------HHHHTTGGGGEEEEEEEEE
T ss_pred HHhcCCCceEEEECC-----CC------------HHHHHHHHHHHhcCCEEEE
Confidence 443314799999643 21 1235677899999999987
No 428
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=85.77 E-value=3.4 Score=35.88 Aligned_cols=74 Identities=18% Similarity=0.159 Sum_probs=50.0
Q ss_pred CCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCE-EEEEeCCCCC----------CCCCcEEEecCccCh-hhHH
Q 021161 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPL-IVAIDLQPMA----------PIEGVIQVQGDITNA-RTAE 109 (316)
Q Consensus 42 ~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~-IvaVDl~~~~----------~i~gV~~i~gDIt~~-~t~~ 109 (316)
+++||=.|+ .|+.-..+++++.. .+.+ |+.++.++.. +-.++.++++|+++. ..++
T Consensus 5 ~k~vlVtGa-s~gIG~~~a~~l~~-----------~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~ 72 (254)
T 1sby_A 5 NKNVIFVAA-LGGIGLDTSRELVK-----------RNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESK 72 (254)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHH-----------TCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHH
T ss_pred CcEEEEECC-CChHHHHHHHHHHH-----------CCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHH
Confidence 567887776 68899999888742 2344 8888887521 012477889999987 5544
Q ss_pred HHHh----hcCCccccEEEeCCCC
Q 021161 110 VVIR----HFDGCKADLVVCDGAP 129 (316)
Q Consensus 110 ~I~~----~~~~~~~DlVvsDgap 129 (316)
.+.+ .+ +.+|+||.+.+.
T Consensus 73 ~~~~~~~~~~--g~id~lv~~Ag~ 94 (254)
T 1sby_A 73 KLLKKIFDQL--KTVDILINGAGI 94 (254)
T ss_dssp HHHHHHHHHH--SCCCEEEECCCC
T ss_pred HHHHHHHHhc--CCCCEEEECCcc
Confidence 4333 33 369999998753
No 429
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=85.74 E-value=2.4 Score=39.18 Aligned_cols=80 Identities=16% Similarity=0.082 Sum_probs=51.6
Q ss_pred HcCCcCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC------------------------
Q 021161 35 EFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------------------------ 90 (316)
Q Consensus 35 ~f~~~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~------------------------ 90 (316)
.|+.+..+.+||=.| |+|....++++++.. .+.+|+++|...-.
T Consensus 4 ~~~~~~~~~~vlVTG-~tGfIG~~l~~~L~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 71 (404)
T 1i24_A 4 SHHHHHHGSRVMVIG-GDGYCGWATALHLSK-----------KNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRW 71 (404)
T ss_dssp --------CEEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHH
T ss_pred ccccccCCCeEEEeC-CCcHHHHHHHHHHHh-----------CCCeEEEEEecCccccccccccccccccchhhhhhhhH
Confidence 356667889999666 669999999888741 24689999864210
Q ss_pred ---CCCCcEEEecCccChhhHHHHHhhcCCccccEEEeCCCC
Q 021161 91 ---PIEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAP 129 (316)
Q Consensus 91 ---~i~gV~~i~gDIt~~~t~~~I~~~~~~~~~DlVvsDgap 129 (316)
...++.++++|+++...+..+.+.. .+|+|+..++.
T Consensus 72 ~~~~~~~v~~~~~Dl~d~~~~~~~~~~~---~~D~Vih~A~~ 110 (404)
T 1i24_A 72 KALTGKSIELYVGDICDFEFLAESFKSF---EPDSVVHFGEQ 110 (404)
T ss_dssp HHHHCCCCEEEESCTTSHHHHHHHHHHH---CCSEEEECCSC
T ss_pred hhccCCceEEEECCCCCHHHHHHHHhcc---CCCEEEECCCC
Confidence 0247889999999987665554332 59999998754
No 430
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=85.67 E-value=0.64 Score=41.58 Aligned_cols=35 Identities=14% Similarity=0.117 Sum_probs=29.0
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCC
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM 89 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~ 89 (316)
.++..|||.+||+|..+.++.+. + .+++|+|+.+.
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~~-g--------------r~~ig~e~~~~ 245 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKKL-G--------------RNFIGCDMNAE 245 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHT-T--------------CEEEEEESCHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHc-C--------------CeEEEEeCCHH
Confidence 67899999999999988776653 2 58999999873
No 431
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=85.54 E-value=1.5 Score=38.73 Aligned_cols=73 Identities=12% Similarity=0.112 Sum_probs=49.8
Q ss_pred CCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------C--CCCcEEEecCccChhhH
Q 021161 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------P--IEGVIQVQGDITNARTA 108 (316)
Q Consensus 42 ~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~--i~gV~~i~gDIt~~~t~ 108 (316)
+++||=.| |.|+.-..+++++.. .+.+|+.++.++.. . -.++.++++|+++...+
T Consensus 6 ~k~vlVTG-as~gIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 73 (278)
T 1spx_A 6 EKVAIITG-SSNGIGRATAVLFAR-----------EGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQ 73 (278)
T ss_dssp TCEEEETT-TTSHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHH
T ss_pred CCEEEEeC-CCchHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHH
Confidence 45566555 557888888887741 34789999987521 1 12477889999998766
Q ss_pred HHHHh----hcCCccccEEEeCCC
Q 021161 109 EVVIR----HFDGCKADLVVCDGA 128 (316)
Q Consensus 109 ~~I~~----~~~~~~~DlVvsDga 128 (316)
+.+.+ .+ +.+|+||.+.+
T Consensus 74 ~~~~~~~~~~~--g~id~lv~~Ag 95 (278)
T 1spx_A 74 DEILSTTLGKF--GKLDILVNNAG 95 (278)
T ss_dssp HHHHHHHHHHH--SCCCEEEECCC
T ss_pred HHHHHHHHHHc--CCCCEEEECCC
Confidence 55443 33 36999999865
No 432
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=85.40 E-value=9.8 Score=33.57 Aligned_cols=77 Identities=10% Similarity=0.007 Sum_probs=52.2
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC--C---------------CCCcEEEecCcc
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--P---------------IEGVIQVQGDIT 103 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~--~---------------i~gV~~i~gDIt 103 (316)
.+++||=.|++ |++-..+++++.. .+.+|+.++.+... . -..+.++++|++
T Consensus 5 ~~k~~lVTGas-~GIG~aia~~la~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~ 72 (274)
T 3e03_A 5 SGKTLFITGAS-RGIGLAIALRAAR-----------DGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIR 72 (274)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH-----------TTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTT
T ss_pred CCcEEEEECCC-ChHHHHHHHHHHH-----------CCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCC
Confidence 45677777766 6778888877642 34689999887642 1 124678899999
Q ss_pred ChhhHHHHHhhcC--CccccEEEeCCCC
Q 021161 104 NARTAEVVIRHFD--GCKADLVVCDGAP 129 (316)
Q Consensus 104 ~~~t~~~I~~~~~--~~~~DlVvsDgap 129 (316)
+...++.+.+.+. .+++|++|.+.+.
T Consensus 73 ~~~~v~~~~~~~~~~~g~iD~lvnnAG~ 100 (274)
T 3e03_A 73 EEDQVRAAVAATVDTFGGIDILVNNASA 100 (274)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 9887665544321 1379999999753
No 433
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=85.33 E-value=14 Score=34.28 Aligned_cols=76 Identities=12% Similarity=0.015 Sum_probs=51.6
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC--C---------------CCCcEEEecCcc
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--P---------------IEGVIQVQGDIT 103 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~--~---------------i~gV~~i~gDIt 103 (316)
.+++||=-|++ |++-..+++++.. .+.+|+.++..+.. . -..+.++++|++
T Consensus 44 ~gk~vlVTGas-~GIG~aia~~La~-----------~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~ 111 (346)
T 3kvo_A 44 AGCTVFITGAS-RGIGKAIALKAAK-----------DGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVR 111 (346)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHT-----------TTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTT
T ss_pred CCCEEEEeCCC-hHHHHHHHHHHHH-----------CCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCC
Confidence 35677777755 6677888887742 35789999887642 1 124678899999
Q ss_pred ChhhHHHHHhhcCC--ccccEEEeCCC
Q 021161 104 NARTAEVVIRHFDG--CKADLVVCDGA 128 (316)
Q Consensus 104 ~~~t~~~I~~~~~~--~~~DlVvsDga 128 (316)
+...++.+.+.+.. +.+|+||.+.+
T Consensus 112 d~~~v~~~~~~~~~~~g~iDilVnnAG 138 (346)
T 3kvo_A 112 DEQQISAAVEKAIKKFGGIDILVNNAS 138 (346)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 98866655443211 37999999965
No 434
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=85.32 E-value=3.7 Score=36.11 Aligned_cols=113 Identities=14% Similarity=0.107 Sum_probs=64.1
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEE-eCCCCC----------CCCCcEEEecCccChhhHH
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAI-DLQPMA----------PIEGVIQVQGDITNARTAE 109 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaV-Dl~~~~----------~i~gV~~i~gDIt~~~t~~ 109 (316)
.+++||=-|+ .|++-..+++++.. .+.+|+.+ +..... .-..+.++++|+++.+.++
T Consensus 7 ~~k~vlVTGa-s~GIG~aia~~la~-----------~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~ 74 (259)
T 3edm_A 7 TNRTIVVAGA-GRDIGRACAIRFAQ-----------EGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVE 74 (259)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHH-----------TTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHH
T ss_pred CCCEEEEECC-CchHHHHHHHHHHH-----------CCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHH
Confidence 3567776775 46677788877741 34688887 433310 1235788999999987666
Q ss_pred HHHhhcC--CccccEEEeCCCCC--CCCCCCccHH-----HHHHHH--HHHHHHHHHcccCCcEEEE
Q 021161 110 VVIRHFD--GCKADLVVCDGAPD--VTGLHDMDEF-----VQSQLI--LAGLTVVTHVLKEGGKFIA 165 (316)
Q Consensus 110 ~I~~~~~--~~~~DlVvsDgapd--vtG~~~~de~-----~~~~L~--~aaL~~a~~vLkpGG~fV~ 165 (316)
.+.+... -++.|+|+.+.+.. ...+.+.+.. +...+. ...++.+...++++|++|.
T Consensus 75 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~ 141 (259)
T 3edm_A 75 AAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVT 141 (259)
T ss_dssp HHHHHHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEE
T ss_pred HHHHHHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEE
Confidence 5543321 13799999986422 1222233221 111111 2234455556667888876
No 435
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=85.31 E-value=3.6 Score=35.26 Aligned_cols=74 Identities=18% Similarity=0.098 Sum_probs=53.8
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC------CCCCcEEEecCccChhhHHHHHhh
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIRH 114 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~------~i~gV~~i~gDIt~~~t~~~I~~~ 114 (316)
.+++||=.|+ .|+.-..+++++.. .+.+|+++|..+.. .+.++.++++|+++...++.+.+.
T Consensus 6 ~~~~vlVTGa-sggiG~~~a~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 73 (244)
T 1cyd_A 6 SGLRALVTGA-GKGIGRDTVKALHA-----------SGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGG 73 (244)
T ss_dssp TTCEEEEEST-TSHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTT
T ss_pred CCCEEEEeCC-CchHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHH
Confidence 3567777765 67888888888741 34689999987521 135788889999998877766653
Q ss_pred cCCccccEEEeCCC
Q 021161 115 FDGCKADLVVCDGA 128 (316)
Q Consensus 115 ~~~~~~DlVvsDga 128 (316)
+ +++|+|+...+
T Consensus 74 ~--~~id~vi~~Ag 85 (244)
T 1cyd_A 74 I--GPVDLLVNNAA 85 (244)
T ss_dssp C--CCCSEEEECCC
T ss_pred c--CCCCEEEECCc
Confidence 3 47999999865
No 436
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=85.16 E-value=0.77 Score=42.86 Aligned_cols=89 Identities=10% Similarity=0.039 Sum_probs=54.2
Q ss_pred CCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCC---CC-C---CCCcEEEecCccChhhHHHHHhh
Q 021161 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQP---MA-P---IEGVIQVQGDITNARTAEVVIRH 114 (316)
Q Consensus 42 ~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~---~~-~---i~gV~~i~gDIt~~~t~~~I~~~ 114 (316)
+.+||=+|+ |+..+.+.+.... .+++|+++|.++ .. . --|...+ | .+ ...+.+.+
T Consensus 181 g~~VlV~Ga--G~vG~~~~q~a~~-----------~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v--~-~~-~~~~~~~~- 242 (366)
T 2cdc_A 181 CRKVLVVGT--GPIGVLFTLLFRT-----------YGLEVWMANRREPTEVEQTVIEETKTNYY--N-SS-NGYDKLKD- 242 (366)
T ss_dssp TCEEEEESC--HHHHHHHHHHHHH-----------HTCEEEEEESSCCCHHHHHHHHHHTCEEE--E-CT-TCSHHHHH-
T ss_pred CCEEEEECC--CHHHHHHHHHHHh-----------CCCEEEEEeCCccchHHHHHHHHhCCcee--c-hH-HHHHHHHH-
Confidence 899999998 6655554433210 135999999886 32 1 1244444 4 44 33344444
Q ss_pred cCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHH-HHHHHcccCCcEEEEE
Q 021161 115 FDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGL-TVVTHVLKEGGKFIAK 166 (316)
Q Consensus 115 ~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL-~~a~~vLkpGG~fV~K 166 (316)
.. ..+|+|+.. +|.. ..+ ..+.++|++||++|.-
T Consensus 243 ~~-~~~d~vid~-----~g~~------------~~~~~~~~~~l~~~G~iv~~ 277 (366)
T 2cdc_A 243 SV-GKFDVIIDA-----TGAD------------VNILGNVIPLLGRNGVLGLF 277 (366)
T ss_dssp HH-CCEEEEEEC-----CCCC------------THHHHHHGGGEEEEEEEEEC
T ss_pred hC-CCCCEEEEC-----CCCh------------HHHHHHHHHHHhcCCEEEEE
Confidence 33 579999954 3321 124 6678999999999873
No 437
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=85.12 E-value=1.1 Score=35.57 Aligned_cols=68 Identities=18% Similarity=0.049 Sum_probs=49.5
Q ss_pred CCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----CCCCcEEEecCccChhhHHHHHhhcCC
Q 021161 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNARTAEVVIRHFDG 117 (316)
Q Consensus 42 ~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----~i~gV~~i~gDIt~~~t~~~I~~~~~~ 117 (316)
.++|+=+|+ |.+.+.+++.+.. .+..|+++|.++.. .-.++.++.||+++..++.. ..-
T Consensus 6 ~~~v~I~G~--G~iG~~la~~L~~-----------~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~----~~~ 68 (141)
T 3llv_A 6 RYEYIVIGS--EAAGVGLVRELTA-----------AGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRS----LDL 68 (141)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHH-----------TTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHH----SCC
T ss_pred CCEEEEECC--CHHHHHHHHHHHH-----------CCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHh----CCc
Confidence 357888887 7799999888741 24689999998742 12478889999999876543 334
Q ss_pred ccccEEEeC
Q 021161 118 CKADLVVCD 126 (316)
Q Consensus 118 ~~~DlVvsD 126 (316)
..+|+|+.-
T Consensus 69 ~~~d~vi~~ 77 (141)
T 3llv_A 69 EGVSAVLIT 77 (141)
T ss_dssp TTCSEEEEC
T ss_pred ccCCEEEEe
Confidence 579999873
No 438
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=85.11 E-value=6.1 Score=35.48 Aligned_cols=76 Identities=18% Similarity=0.063 Sum_probs=51.1
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----------------------CCCCcEEE
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------------------PIEGVIQV 98 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----------------------~i~gV~~i 98 (316)
.+++||=-|++ |++-..+++++.. .+.+|+.+|.++.. .-..+.++
T Consensus 27 ~gk~~lVTGas-~GIG~aia~~la~-----------~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (299)
T 3t7c_A 27 EGKVAFITGAA-RGQGRSHAITLAR-----------EGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIAS 94 (299)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHH-----------TTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHH-----------CCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEE
Confidence 35677777765 5677788777642 35799999987310 01357889
Q ss_pred ecCccChhhHHHHHhhcC--CccccEEEeCCC
Q 021161 99 QGDITNARTAEVVIRHFD--GCKADLVVCDGA 128 (316)
Q Consensus 99 ~gDIt~~~t~~~I~~~~~--~~~~DlVvsDga 128 (316)
++|+++...++.+.+... -++.|+||.+.+
T Consensus 95 ~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg 126 (299)
T 3t7c_A 95 QVDVRDFDAMQAAVDDGVTQLGRLDIVLANAA 126 (299)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred ECCCCCHHHHHHHHHHHHHHhCCCCEEEECCC
Confidence 999999887665544221 137999999865
No 439
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=85.03 E-value=1 Score=43.32 Aligned_cols=39 Identities=15% Similarity=0.057 Sum_probs=31.6
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCC
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM 89 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~ 89 (316)
+++..|+|+||..|.+|..++.+... ..++|+|++.+|.
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~-----------~~~~V~afEP~p~ 263 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKG-----------KFERVWMIEPDRI 263 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTS-----------CCSEEEEECCCHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcC-----------CCCEEEEEcCCHH
Confidence 68899999999999999998844320 2379999999983
No 440
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=85.00 E-value=6.2 Score=36.34 Aligned_cols=74 Identities=20% Similarity=0.044 Sum_probs=51.8
Q ss_pred CCeEEEECCCCCHHHHHHHHHhC-CCCCCCCCCCCCCCCEEEEEeCCCCCC------------------------CCC--
Q 021161 42 VKRVVDLCAAPGSWSQVLSRKLY-LPAKLSPDSREGDLPLIVAIDLQPMAP------------------------IEG-- 94 (316)
Q Consensus 42 ~~rVLDLcagPG~wSq~La~~l~-~~~~~~~~~~~~~~~~IvaVDl~~~~~------------------------i~g-- 94 (316)
+++||=.| |+|..-.++++.+. . .+.+|+++|...... ..+
T Consensus 2 ~m~vlVTG-atG~iG~~l~~~L~~~-----------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (397)
T 1gy8_A 2 HMRVLVCG-GAGYIGSHFVRALLRD-----------TNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADR 69 (397)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHHH-----------CCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTC
T ss_pred CCEEEEEC-CCCHHHHHHHHHHHHh-----------CCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCc
Confidence 35777666 57888888887763 2 246899998764321 125
Q ss_pred -cEEEecCccChhhHHHHHhhcCCccccEEEeCCCC
Q 021161 95 -VIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAP 129 (316)
Q Consensus 95 -V~~i~gDIt~~~t~~~I~~~~~~~~~DlVvsDgap 129 (316)
+.++++|+++...+..+++.+ +.+|+|+..++.
T Consensus 70 ~~~~~~~Dl~d~~~~~~~~~~~--~~~d~vih~A~~ 103 (397)
T 1gy8_A 70 YAALEVGDVRNEDFLNGVFTRH--GPIDAVVHMCAF 103 (397)
T ss_dssp CCEEEESCTTCHHHHHHHHHHS--CCCCEEEECCCC
T ss_pred eEEEEECCCCCHHHHHHHHHhc--CCCCEEEECCCc
Confidence 889999999988766655432 249999998754
No 441
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=84.97 E-value=6.5 Score=33.68 Aligned_cols=76 Identities=13% Similarity=0.160 Sum_probs=50.6
Q ss_pred CCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----------C-CCCcEEEecCccChhhHHH
Q 021161 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------P-IEGVIQVQGDITNARTAEV 110 (316)
Q Consensus 42 ~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----------~-i~gV~~i~gDIt~~~t~~~ 110 (316)
+++||=.| |.|+.-..+++++.. .+.+|+.++.++.. . -..+.++++|+++...++.
T Consensus 2 ~k~vlItG-asggiG~~~a~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 69 (250)
T 2cfc_A 2 SRVAIVTG-ASSGNGLAIATRFLA-----------RGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNA 69 (250)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHH
T ss_pred CCEEEEeC-CCchHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHH
Confidence 35667666 458888888888742 24689999887521 0 1247889999999876655
Q ss_pred HHhhcC--CccccEEEeCCCC
Q 021161 111 VIRHFD--GCKADLVVCDGAP 129 (316)
Q Consensus 111 I~~~~~--~~~~DlVvsDgap 129 (316)
+.+... .+.+|+|+++.+.
T Consensus 70 ~~~~~~~~~~~id~li~~Ag~ 90 (250)
T 2cfc_A 70 AIAATMEQFGAIDVLVNNAGI 90 (250)
T ss_dssp HHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHhCCCCEEEECCCC
Confidence 443221 1369999998753
No 442
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=84.97 E-value=0.84 Score=42.51 Aligned_cols=89 Identities=17% Similarity=0.155 Sum_probs=52.0
Q ss_pred cCCCCeEEEECCCC-CHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCC----CCCcEEEecCccCh-hhHHHHH
Q 021161 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITNA-RTAEVVI 112 (316)
Q Consensus 39 ~~~~~rVLDLcagP-G~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~----i~gV~~i~gDIt~~-~t~~~I~ 112 (316)
++++.+||-+|+|+ |.....+++.++ .+|+++|.++... --|...+ -|..+. ...+
T Consensus 177 ~~~g~~VlV~GaG~vG~~~~qlak~~G--------------a~Vi~~~~~~~~~~~~~~lGa~~v-~~~~~~~~~~~--- 238 (360)
T 1piw_A 177 CGPGKKVGIVGLGGIGSMGTLISKAMG--------------AETYVISRSSRKREDAMKMGADHY-IATLEEGDWGE--- 238 (360)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHHT--------------CEEEEEESSSTTHHHHHHHTCSEE-EEGGGTSCHHH---
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCC--------------CEEEEEcCCHHHHHHHHHcCCCEE-EcCcCchHHHH---
Confidence 46889999999854 444444555553 6899999877531 0132211 122222 2222
Q ss_pred hhcCCccccEEEeCCCCCCCCC---CCccHHHHHHHHHHHHHHHHHcccCCcEEEE
Q 021161 113 RHFDGCKADLVVCDGAPDVTGL---HDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (316)
Q Consensus 113 ~~~~~~~~DlVvsDgapdvtG~---~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~ 165 (316)
.+. +.+|+|+-- +|. .. +..+.++|++||+++.
T Consensus 239 -~~~-~~~D~vid~-----~g~~~~~~-------------~~~~~~~l~~~G~iv~ 274 (360)
T 1piw_A 239 -KYF-DTFDLIVVC-----ASSLTDID-------------FNIMPKAMKVGGRIVS 274 (360)
T ss_dssp -HSC-SCEEEEEEC-----CSCSTTCC-------------TTTGGGGEEEEEEEEE
T ss_pred -Hhh-cCCCEEEEC-----CCCCcHHH-------------HHHHHHHhcCCCEEEE
Confidence 222 479999853 322 11 2346789999999986
No 443
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=84.92 E-value=2.7 Score=37.52 Aligned_cols=77 Identities=12% Similarity=0.079 Sum_probs=53.1
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCC----------CCCcEEEecCccChhhHHH
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----------IEGVIQVQGDITNARTAEV 110 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~----------i~gV~~i~gDIt~~~t~~~ 110 (316)
.+++||=.|++ |++-..+++++.. .+.+|+.+|.++... -..+.++++|+++...++.
T Consensus 31 ~gk~~lVTGas-~GIG~aia~~la~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~ 98 (276)
T 3r1i_A 31 SGKRALITGAS-TGIGKKVALAYAE-----------AGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRG 98 (276)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHH-----------TTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHH
Confidence 45677777755 6788888887742 357899999876321 1357889999999887665
Q ss_pred HHhhcC--CccccEEEeCCCC
Q 021161 111 VIRHFD--GCKADLVVCDGAP 129 (316)
Q Consensus 111 I~~~~~--~~~~DlVvsDgap 129 (316)
+.+.+. -+++|+||.+.+.
T Consensus 99 ~~~~~~~~~g~iD~lvnnAg~ 119 (276)
T 3r1i_A 99 MLDQMTGELGGIDIAVCNAGI 119 (276)
T ss_dssp HHHHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHHHcCCCCEEEECCCC
Confidence 544321 1379999998753
No 444
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=84.80 E-value=1 Score=46.67 Aligned_cols=55 Identities=18% Similarity=0.081 Sum_probs=38.4
Q ss_pred CCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCC-EEEEEeCCCCC------CCCCcEEEecCccCh
Q 021161 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLP-LIVAIDLQPMA------PIEGVIQVQGDITNA 105 (316)
Q Consensus 42 ~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~-~IvaVDl~~~~------~i~gV~~i~gDIt~~ 105 (316)
..+||||-||.||+|.-+.+..... +... .+.|+|+.+.+ ..++...+.+||.+.
T Consensus 212 ~ltvIDLFAG~GGls~Gfe~AG~~~---------~~~f~vv~AvE~d~~A~~Ty~~Nhp~~~~~~~di~~i 273 (784)
T 4ft4_B 212 TATLLDLYSGCGGMSTGLCLGAALS---------GLKLETRWAVDFNSFACQSLKYNHPQTEVRNEKADEF 273 (784)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHH---------TEEEEEEEEEESCHHHHHHHHHHCTTSEEEESCHHHH
T ss_pred CCeEEEeCcCccHHHHHHHHhCccc---------CCceeEEEEEeCCHHHHHHHHHHCCCCceecCcHHHh
Confidence 3689999999999999887653100 0012 46799999964 356777778887653
No 445
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=84.73 E-value=1 Score=41.29 Aligned_cols=76 Identities=12% Similarity=0.073 Sum_probs=52.3
Q ss_pred CCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC------CC----C--CcEEEecCccChhhHH
Q 021161 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PI----E--GVIQVQGDITNARTAE 109 (316)
Q Consensus 42 ~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~------~i----~--gV~~i~gDIt~~~t~~ 109 (316)
+++||=-|++ |++...+++.+.. .+.+|+.++.++.. .+ . .+.++++|+++.....
T Consensus 8 ~k~vlVTGas-~gIG~~la~~l~~-----------~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~ 75 (319)
T 3ioy_A 8 GRTAFVTGGA-NGVGIGLVRQLLN-----------QGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFK 75 (319)
T ss_dssp TCEEEEETTT-STHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHH
T ss_pred CCEEEEcCCc-hHHHHHHHHHHHH-----------CCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHH
Confidence 5677777765 6678888887741 34789999988631 01 1 5788999999988666
Q ss_pred HHHhhcC--CccccEEEeCCCC
Q 021161 110 VVIRHFD--GCKADLVVCDGAP 129 (316)
Q Consensus 110 ~I~~~~~--~~~~DlVvsDgap 129 (316)
.+.+... .+.+|+||.+.+.
T Consensus 76 ~~~~~~~~~~g~id~lv~nAg~ 97 (319)
T 3ioy_A 76 MAADEVEARFGPVSILCNNAGV 97 (319)
T ss_dssp HHHHHHHHHTCCEEEEEECCCC
T ss_pred HHHHHHHHhCCCCCEEEECCCc
Confidence 5544321 1479999999754
No 446
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=84.70 E-value=8.2 Score=35.62 Aligned_cols=72 Identities=15% Similarity=0.010 Sum_probs=52.8
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCC----CCCcEEEecCccChhhHHHHHhhcC
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITNARTAEVVIRHFD 116 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~----i~gV~~i~gDIt~~~t~~~I~~~~~ 116 (316)
..++||=.| |+|.....+++.+.. .+.+|++++..+... ..++.++++|+++...+..++ .
T Consensus 28 ~~~~vlVtG-atG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~---~ 92 (379)
T 2c5a_A 28 ENLKISITG-AGGFIASHIARRLKH-----------EGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVT---E 92 (379)
T ss_dssp SCCEEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHH---T
T ss_pred cCCeEEEEC-CccHHHHHHHHHHHH-----------CCCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHHh---C
Confidence 457888777 568899998887741 246899999876432 247899999999987655543 2
Q ss_pred CccccEEEeCCCC
Q 021161 117 GCKADLVVCDGAP 129 (316)
Q Consensus 117 ~~~~DlVvsDgap 129 (316)
.+|.|+...+.
T Consensus 93 --~~d~Vih~A~~ 103 (379)
T 2c5a_A 93 --GVDHVFNLAAD 103 (379)
T ss_dssp --TCSEEEECCCC
T ss_pred --CCCEEEECcee
Confidence 69999987654
No 447
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=84.70 E-value=0.88 Score=41.84 Aligned_cols=93 Identities=15% Similarity=0.031 Sum_probs=53.9
Q ss_pred cCCCCeEEEECC--CCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----C-CCCcEEEecCccCh-hhHHH
Q 021161 39 FEGVKRVVDLCA--APGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----P-IEGVIQVQGDITNA-RTAEV 110 (316)
Q Consensus 39 ~~~~~rVLDLca--gPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----~-i~gV~~i~gDIt~~-~t~~~ 110 (316)
++++.+||-.|| |-|.....+++.. +++|+++|.++.. . --|.... .|.++. ...+.
T Consensus 153 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~--------------G~~V~~~~~~~~~~~~~~~~~g~~~~-~d~~~~~~~~~~ 217 (345)
T 2j3h_A 153 PKEGETVYVSAASGAVGQLVGQLAKMM--------------GCYVVGSAGSKEKVDLLKTKFGFDDA-FNYKEESDLTAA 217 (345)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT--------------TCEEEEEESSHHHHHHHHHTSCCSEE-EETTSCSCSHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC--------------CCEEEEEeCCHHHHHHHHHHcCCceE-EecCCHHHHHHH
Confidence 467899999997 2233333334433 3689999987521 1 1233211 144432 22333
Q ss_pred HHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEE
Q 021161 111 VIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (316)
Q Consensus 111 I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~ 165 (316)
+.+.. +..+|+|+... |. ..+..+.++|++||++++
T Consensus 218 ~~~~~-~~~~d~vi~~~-----g~-------------~~~~~~~~~l~~~G~~v~ 253 (345)
T 2j3h_A 218 LKRCF-PNGIDIYFENV-----GG-------------KMLDAVLVNMNMHGRIAV 253 (345)
T ss_dssp HHHHC-TTCEEEEEESS-----CH-------------HHHHHHHTTEEEEEEEEE
T ss_pred HHHHh-CCCCcEEEECC-----CH-------------HHHHHHHHHHhcCCEEEE
Confidence 43333 35799999642 21 135677899999999986
No 448
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=84.65 E-value=1.8 Score=39.11 Aligned_cols=77 Identities=12% Similarity=-0.050 Sum_probs=52.8
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----------CCCCcEEEecCccChhhHHH
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTAEV 110 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----------~i~gV~~i~gDIt~~~t~~~ 110 (316)
.+++||=.|++ |++-..+++++.. .+.+|+.+|.++.. .-..+.++++|+++...+..
T Consensus 30 ~gk~vlVTGas-~gIG~~la~~l~~-----------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~ 97 (301)
T 3tjr_A 30 DGRAAVVTGGA-SGIGLATATEFAR-----------RGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVR 97 (301)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHH-----------CCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence 35677777766 6788888887742 34789999987631 11357889999999887665
Q ss_pred HHhhcC--CccccEEEeCCCC
Q 021161 111 VIRHFD--GCKADLVVCDGAP 129 (316)
Q Consensus 111 I~~~~~--~~~~DlVvsDgap 129 (316)
+.+... .+.+|+||.+.+.
T Consensus 98 ~~~~~~~~~g~id~lvnnAg~ 118 (301)
T 3tjr_A 98 LADEAFRLLGGVDVVFSNAGI 118 (301)
T ss_dssp HHHHHHHHHSSCSEEEECCCC
T ss_pred HHHHHHHhCCCCCEEEECCCc
Confidence 544321 1379999999753
No 449
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=84.64 E-value=4 Score=36.84 Aligned_cols=72 Identities=17% Similarity=0.025 Sum_probs=50.2
Q ss_pred CeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------------CCCCcEEEecCccCh
Q 021161 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------------PIEGVIQVQGDITNA 105 (316)
Q Consensus 43 ~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------------~i~gV~~i~gDIt~~ 105 (316)
++||=.| |+|.....+++.+.. .+.+|+++|...-. .-.++.++++|+++.
T Consensus 3 ~~vlVtG-atG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~ 70 (348)
T 1ek6_A 3 EKVLVTG-GAGYIGSHTVLELLE-----------AGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQ 70 (348)
T ss_dssp SEEEEET-TTSHHHHHHHHHHHH-----------TTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCH
T ss_pred CEEEEEC-CCCHHHHHHHHHHHH-----------CCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCH
Confidence 4666665 578888898887741 24689999875421 013688999999998
Q ss_pred hhHHHHHhhcCCccccEEEeCCCC
Q 021161 106 RTAEVVIRHFDGCKADLVVCDGAP 129 (316)
Q Consensus 106 ~t~~~I~~~~~~~~~DlVvsDgap 129 (316)
..+..+.+.+ .+|.|+...+.
T Consensus 71 ~~~~~~~~~~---~~d~vih~A~~ 91 (348)
T 1ek6_A 71 GALQRLFKKY---SFMAVIHFAGL 91 (348)
T ss_dssp HHHHHHHHHC---CEEEEEECCSC
T ss_pred HHHHHHHHhc---CCCEEEECCCC
Confidence 7766655432 69999987653
No 450
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=84.53 E-value=3.2 Score=36.40 Aligned_cols=76 Identities=14% Similarity=0.129 Sum_probs=50.7
Q ss_pred CCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC---------C---CCCcEEEecCccChhhHH
Q 021161 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------P---IEGVIQVQGDITNARTAE 109 (316)
Q Consensus 42 ~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~---------~---i~gV~~i~gDIt~~~t~~ 109 (316)
+++||=.|+ .|+.-..+++++.. .+.+|+.+|.++.. . -.++.++++|+++...++
T Consensus 7 ~k~vlVTGa-s~gIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~ 74 (267)
T 2gdz_A 7 GKVALVTGA-AQGIGRAFAEALLL-----------KGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLR 74 (267)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHH
T ss_pred CCEEEEECC-CCcHHHHHHHHHHH-----------CCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHH
Confidence 467777775 57788888887741 34789999887521 0 124788999999987665
Q ss_pred HHHhhcC--CccccEEEeCCCC
Q 021161 110 VVIRHFD--GCKADLVVCDGAP 129 (316)
Q Consensus 110 ~I~~~~~--~~~~DlVvsDgap 129 (316)
.+.+... -+++|+|+.+.+.
T Consensus 75 ~~~~~~~~~~g~id~lv~~Ag~ 96 (267)
T 2gdz_A 75 DTFRKVVDHFGRLDILVNNAGV 96 (267)
T ss_dssp HHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHcCCCCEEEECCCC
Confidence 5443211 1369999998653
No 451
>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}
Probab=84.50 E-value=4.7 Score=34.91 Aligned_cols=66 Identities=21% Similarity=0.185 Sum_probs=46.8
Q ss_pred eEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCCCCCcEEEecCccChhhHHHHHhhcCCccccEE
Q 021161 44 RVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKADLV 123 (316)
Q Consensus 44 rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~i~gV~~i~gDIt~~~t~~~I~~~~~~~~~DlV 123 (316)
+||=.| |+|.....+++.+. .+.+|++++..+... ++ +++|+++...+..+.+.. .+|.|
T Consensus 2 ~ilVtG-atG~iG~~l~~~L~------------~g~~V~~~~r~~~~~-~~---~~~Dl~~~~~~~~~~~~~---~~d~v 61 (273)
T 2ggs_A 2 RTLITG-ASGQLGIELSRLLS------------ERHEVIKVYNSSEIQ-GG---YKLDLTDFPRLEDFIIKK---RPDVI 61 (273)
T ss_dssp CEEEET-TTSHHHHHHHHHHT------------TTSCEEEEESSSCCT-TC---EECCTTSHHHHHHHHHHH---CCSEE
T ss_pred EEEEEC-CCChhHHHHHHHHh------------cCCeEEEecCCCcCC-CC---ceeccCCHHHHHHHHHhc---CCCEE
Confidence 455555 57899999999884 136899999876432 44 789999987665554322 59999
Q ss_pred EeCCCC
Q 021161 124 VCDGAP 129 (316)
Q Consensus 124 vsDgap 129 (316)
+...+.
T Consensus 62 i~~a~~ 67 (273)
T 2ggs_A 62 INAAAM 67 (273)
T ss_dssp EECCCC
T ss_pred EECCcc
Confidence 987653
No 452
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=84.48 E-value=2.6 Score=38.53 Aligned_cols=96 Identities=10% Similarity=0.022 Sum_probs=56.1
Q ss_pred cCCCCeEEEECCCCCHHHHH-HHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----CCCCc-EEEecCccChhhHHHHH
Q 021161 39 FEGVKRVVDLCAAPGSWSQV-LSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGV-IQVQGDITNARTAEVVI 112 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~-La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----~i~gV-~~i~gDIt~~~t~~~I~ 112 (316)
++++.+||=.|||+.+...+ +++.++ ...|+++|.++.. .--|. ..+ |..+....+.+.
T Consensus 158 ~~~g~~VlV~GaG~vG~~aiq~ak~~G-------------~~~vi~~~~~~~k~~~a~~lGa~~~i--~~~~~~~~~~~~ 222 (346)
T 4a2c_A 158 GCENKNVIIIGAGTIGLLAIQCAVALG-------------AKSVTAIDISSEKLALAKSFGAMQTF--NSSEMSAPQMQS 222 (346)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTT-------------CSEEEEEESCHHHHHHHHHTTCSEEE--ETTTSCHHHHHH
T ss_pred cCCCCEEEEECCCCcchHHHHHHHHcC-------------CcEEEEEechHHHHHHHHHcCCeEEE--eCCCCCHHHHHH
Confidence 36789999999877554433 445443 2467899988742 11232 222 222222222333
Q ss_pred hhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEE
Q 021161 113 RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (316)
Q Consensus 113 ~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~K 166 (316)
...++..+|+|+.. +|. ...+..+.++|++||++++-
T Consensus 223 ~~~~~~g~d~v~d~-----~G~------------~~~~~~~~~~l~~~G~~v~~ 259 (346)
T 4a2c_A 223 VLRELRFNQLILET-----AGV------------PQTVELAVEIAGPHAQLALV 259 (346)
T ss_dssp HHGGGCSSEEEEEC-----SCS------------HHHHHHHHHHCCTTCEEEEC
T ss_pred hhcccCCccccccc-----ccc------------cchhhhhhheecCCeEEEEE
Confidence 33344568888743 332 13466788999999999874
No 453
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=84.47 E-value=2.4 Score=37.58 Aligned_cols=77 Identities=16% Similarity=0.079 Sum_probs=51.6
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCCcEEEecCccCh-hhH
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNA-RTA 108 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~gV~~i~gDIt~~-~t~ 108 (316)
.+++||=-| |.|++-..+++++.. .+.+|+.++.++.. .-.++.++++|+++. ...
T Consensus 11 ~~k~vlITG-as~GIG~~~a~~L~~-----------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v 78 (311)
T 3o26_A 11 KRRCAVVTG-GNKGIGFEICKQLSS-----------NGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATM 78 (311)
T ss_dssp -CCEEEESS-CSSHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHH
T ss_pred CCcEEEEec-CCchHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHH
Confidence 345666555 457788888888742 35789999987631 123688999999997 655
Q ss_pred HHHHhhcCC--ccccEEEeCCCC
Q 021161 109 EVVIRHFDG--CKADLVVCDGAP 129 (316)
Q Consensus 109 ~~I~~~~~~--~~~DlVvsDgap 129 (316)
+.+.+.+.. +++|+||.+.+.
T Consensus 79 ~~~~~~~~~~~g~iD~lv~nAg~ 101 (311)
T 3o26_A 79 SSLADFIKTHFGKLDILVNNAGV 101 (311)
T ss_dssp HHHHHHHHHHHSSCCEEEECCCC
T ss_pred HHHHHHHHHhCCCCCEEEECCcc
Confidence 554443211 379999999754
No 454
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=84.44 E-value=6.2 Score=33.88 Aligned_cols=77 Identities=14% Similarity=0.039 Sum_probs=52.2
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----------CCCCcEEEecCccChhhHHH
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTAEV 110 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----------~i~gV~~i~gDIt~~~t~~~ 110 (316)
.+++||=.| |.|+.-..+++++.. .+.+|+++|.++.. .-.++.++++|+++...++.
T Consensus 10 ~~~~vlVtG-asggiG~~la~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 77 (255)
T 1fmc_A 10 DGKCAIITG-AGAGIGKEIAITFAT-----------AGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSA 77 (255)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHT-----------TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEEC-CccHHHHHHHHHHHH-----------CCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHH
Confidence 345666555 678899999888742 34789999987521 01357888999999876665
Q ss_pred HHhhcC--CccccEEEeCCCC
Q 021161 111 VIRHFD--GCKADLVVCDGAP 129 (316)
Q Consensus 111 I~~~~~--~~~~DlVvsDgap 129 (316)
+.+... .+.+|+|+...+.
T Consensus 78 ~~~~~~~~~~~~d~vi~~Ag~ 98 (255)
T 1fmc_A 78 LADFAISKLGKVDILVNNAGG 98 (255)
T ss_dssp HHHHHHHHHSSCCEEEECCCC
T ss_pred HHHHHHHhcCCCCEEEECCCC
Confidence 543211 1369999998653
No 455
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=84.41 E-value=6.8 Score=34.01 Aligned_cols=76 Identities=5% Similarity=-0.021 Sum_probs=53.3
Q ss_pred CCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCC---CEEEEEeCCCCCC---------CCCcEEEecCccChhhHH
Q 021161 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDL---PLIVAIDLQPMAP---------IEGVIQVQGDITNARTAE 109 (316)
Q Consensus 42 ~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~---~~IvaVDl~~~~~---------i~gV~~i~gDIt~~~t~~ 109 (316)
+++||=.| |.|+....+++++.. .+ .+|++++.++... ..++.++.+|+++.+.++
T Consensus 21 ~k~vlITG-asggIG~~la~~L~~-----------~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~ 88 (267)
T 1sny_A 21 MNSILITG-CNRGLGLGLVKALLN-----------LPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYD 88 (267)
T ss_dssp CSEEEESC-CSSHHHHHHHHHHHT-----------SSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHH
T ss_pred CCEEEEEC-CCCcHHHHHHHHHHh-----------cCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHH
Confidence 45677666 468899999988742 23 6899999886421 136888999999988766
Q ss_pred HHHhh----cCCccccEEEeCCCC
Q 021161 110 VVIRH----FDGCKADLVVCDGAP 129 (316)
Q Consensus 110 ~I~~~----~~~~~~DlVvsDgap 129 (316)
.+.+. ++...+|+||...+.
T Consensus 89 ~~~~~~~~~~g~~~id~li~~Ag~ 112 (267)
T 1sny_A 89 KLVADIEGVTKDQGLNVLFNNAGI 112 (267)
T ss_dssp HHHHHHHHHHGGGCCSEEEECCCC
T ss_pred HHHHHHHHhcCCCCccEEEECCCc
Confidence 55543 322269999998653
No 456
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=84.41 E-value=4.3 Score=37.26 Aligned_cols=72 Identities=15% Similarity=0.031 Sum_probs=49.8
Q ss_pred CeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----------------CCCCcEEEecCccChh
Q 021161 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------------PIEGVIQVQGDITNAR 106 (316)
Q Consensus 43 ~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----------------~i~gV~~i~gDIt~~~ 106 (316)
++||=.| |+|.....+++.+.. .+.+|++++..+.. ...++.++++|+++..
T Consensus 25 ~~vlVtG-atG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~ 92 (375)
T 1t2a_A 25 NVALITG-ITGQDGSYLAEFLLE-----------KGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDST 92 (375)
T ss_dssp CEEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHH
T ss_pred cEEEEEC-CCchHHHHHHHHHHH-----------CCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHH
Confidence 3677666 568888888887741 24689999887532 1246888999999987
Q ss_pred hHHHHHhhcCCccccEEEeCCCC
Q 021161 107 TAEVVIRHFDGCKADLVVCDGAP 129 (316)
Q Consensus 107 t~~~I~~~~~~~~~DlVvsDgap 129 (316)
.+..+++. ..+|.|+..++.
T Consensus 93 ~~~~~~~~---~~~d~vih~A~~ 112 (375)
T 1t2a_A 93 CLVKIINE---VKPTEIYNLGAQ 112 (375)
T ss_dssp HHHHHHHH---HCCSEEEECCSC
T ss_pred HHHHHHHh---cCCCEEEECCCc
Confidence 66655433 258999987654
No 457
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=84.00 E-value=1.4 Score=39.07 Aligned_cols=70 Identities=16% Similarity=0.200 Sum_probs=52.2
Q ss_pred CCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCCCCCcEEEecCccChhhHHHHHhhcCCcccc
Q 021161 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKAD 121 (316)
Q Consensus 42 ~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~i~gV~~i~gDIt~~~t~~~I~~~~~~~~~D 121 (316)
.++||=.| + |.....+++.+.. .+.+|++++..+....+++.++++|+++...+..+ +. +.+|
T Consensus 3 ~~~ilVtG-a-G~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~~~~Dl~d~~~~~~~---~~-~~~d 65 (286)
T 3gpi_A 3 LSKILIAG-C-GDLGLELARRLTA-----------QGHEVTGLRRSAQPMPAGVQTLIADVTRPDTLASI---VH-LRPE 65 (286)
T ss_dssp CCCEEEEC-C-SHHHHHHHHHHHH-----------TTCCEEEEECTTSCCCTTCCEEECCTTCGGGCTTG---GG-GCCS
T ss_pred CCcEEEEC-C-CHHHHHHHHHHHH-----------CCCEEEEEeCCccccccCCceEEccCCChHHHHHh---hc-CCCC
Confidence 36788888 5 9999999988741 24689999988755456899999999998754332 32 3599
Q ss_pred EEEeCCC
Q 021161 122 LVVCDGA 128 (316)
Q Consensus 122 lVvsDga 128 (316)
.|+.-++
T Consensus 66 ~vih~a~ 72 (286)
T 3gpi_A 66 ILVYCVA 72 (286)
T ss_dssp EEEECHH
T ss_pred EEEEeCC
Confidence 9998754
No 458
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=83.81 E-value=4.3 Score=36.90 Aligned_cols=72 Identities=19% Similarity=0.084 Sum_probs=52.2
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCC---------------CCCcEEEecCccCh
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP---------------IEGVIQVQGDITNA 105 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~---------------i~gV~~i~gDIt~~ 105 (316)
.+++||=.| |+|.....+++.+.. .+.+|++++..+... ..++.++++|+++.
T Consensus 26 ~~~~vlVtG-atG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~ 93 (352)
T 1sb8_A 26 QPKVWLITG-VAGFIGSNLLETLLK-----------LDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNL 93 (352)
T ss_dssp SCCEEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSH
T ss_pred cCCeEEEEC-CCcHHHHHHHHHHHH-----------CCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCH
Confidence 356888777 578899998887741 246899999865310 15789999999998
Q ss_pred hhHHHHHhhcCCccccEEEeCCCC
Q 021161 106 RTAEVVIRHFDGCKADLVVCDGAP 129 (316)
Q Consensus 106 ~t~~~I~~~~~~~~~DlVvsDgap 129 (316)
..+..+. . .+|.|+...+.
T Consensus 94 ~~~~~~~---~--~~d~vih~A~~ 112 (352)
T 1sb8_A 94 DDCNNAC---A--GVDYVLHQAAL 112 (352)
T ss_dssp HHHHHHH---T--TCSEEEECCSC
T ss_pred HHHHHHh---c--CCCEEEECCcc
Confidence 7655543 2 69999987654
No 459
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=83.80 E-value=4.8 Score=35.65 Aligned_cols=76 Identities=16% Similarity=0.094 Sum_probs=52.5
Q ss_pred CCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC------CCCCcEEEecCccChhhHHHHHhhc
Q 021161 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIRHF 115 (316)
Q Consensus 42 ~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~------~i~gV~~i~gDIt~~~t~~~I~~~~ 115 (316)
+++||=.|+ .|+.-..+++++.. .+.+|+.+|.++.. .+.++.++++|+++...++.+.+..
T Consensus 9 ~k~vlVTGa-s~gIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 76 (270)
T 1yde_A 9 GKVVVVTGG-GRGIGAGIVRAFVN-----------SGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSET 76 (270)
T ss_dssp TCEEEEETC-SSHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEECC-CcHHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHH
Confidence 467777775 57788888887742 34789999987531 2456888999999987665544321
Q ss_pred C--CccccEEEeCCCC
Q 021161 116 D--GCKADLVVCDGAP 129 (316)
Q Consensus 116 ~--~~~~DlVvsDgap 129 (316)
. -+++|+||.+.+.
T Consensus 77 ~~~~g~iD~lv~nAg~ 92 (270)
T 1yde_A 77 IRRFGRLDCVVNNAGH 92 (270)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 1 1369999998753
No 460
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=83.75 E-value=4.6 Score=35.50 Aligned_cols=77 Identities=9% Similarity=-0.032 Sum_probs=51.5
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC------------CCCCcEEEecCccChhhH
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------------PIEGVIQVQGDITNARTA 108 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~------------~i~gV~~i~gDIt~~~t~ 108 (316)
.+++||=-|++ |+.-..+++++.. .+.+|+.+|.++.. +-..+.++++|+++....
T Consensus 7 ~~k~~lVTGas-~GIG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v 74 (265)
T 3lf2_A 7 SEAVAVVTGGS-SGIGLATVELLLE-----------AGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQV 74 (265)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHH
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHH
Confidence 35677777755 6677888877642 35789999987631 112478899999998766
Q ss_pred HHHHhhcC--CccccEEEeCCCC
Q 021161 109 EVVIRHFD--GCKADLVVCDGAP 129 (316)
Q Consensus 109 ~~I~~~~~--~~~~DlVvsDgap 129 (316)
+.+.+... .++.|++|.+.+.
T Consensus 75 ~~~~~~~~~~~g~id~lvnnAg~ 97 (265)
T 3lf2_A 75 RAFAEACERTLGCASILVNNAGQ 97 (265)
T ss_dssp HHHHHHHHHHHCSCSEEEECCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCC
Confidence 55544321 1379999998653
No 461
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=83.66 E-value=1.3 Score=40.19 Aligned_cols=84 Identities=10% Similarity=0.092 Sum_probs=50.2
Q ss_pred cCCCCeEEEECCCC-CHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCC----CCCcEEEecCccChhhHHHHHh
Q 021161 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITNARTAEVVIR 113 (316)
Q Consensus 39 ~~~~~rVLDLcagP-G~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~----i~gV~~i~gDIt~~~t~~~I~~ 113 (316)
++++.+||=+|+|+ |.....+++..+ ++|++++ ++... --|...+.-| . +
T Consensus 140 ~~~g~~VlV~GaG~vG~~a~qlak~~G--------------a~Vi~~~-~~~~~~~~~~lGa~~v~~d---~---~---- 194 (315)
T 3goh_A 140 LTKQREVLIVGFGAVNNLLTQMLNNAG--------------YVVDLVS-ASLSQALAAKRGVRHLYRE---P---S---- 194 (315)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHHT--------------CEEEEEC-SSCCHHHHHHHTEEEEESS---G---G----
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC--------------CEEEEEE-ChhhHHHHHHcCCCEEEcC---H---H----
Confidence 47899999999944 444445566553 6999999 66431 1244332223 1 1
Q ss_pred hcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEE
Q 021161 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (316)
Q Consensus 114 ~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~K 166 (316)
.+ +..+|+|+- ++|... +..+.++|++||+++.-
T Consensus 195 ~v-~~g~Dvv~d-----~~g~~~-------------~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 195 QV-TQKYFAIFD-----AVNSQN-------------AAALVPSLKANGHIICI 228 (315)
T ss_dssp GC-CSCEEEEEC-----C--------------------TTGGGEEEEEEEEEE
T ss_pred Hh-CCCccEEEE-----CCCchh-------------HHHHHHHhcCCCEEEEE
Confidence 12 568999983 344321 23467899999999983
No 462
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=83.64 E-value=3 Score=36.22 Aligned_cols=77 Identities=18% Similarity=0.104 Sum_probs=52.3
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----------CCCCcEEEecCccChhhHHH
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTAEV 110 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----------~i~gV~~i~gDIt~~~t~~~ 110 (316)
.+++||=.|+ .|++-..+++++.. .+.+|+.+|.++.. .-..+.++++|+++...++.
T Consensus 8 ~~k~vlITGa-s~giG~~~a~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 75 (253)
T 3qiv_A 8 ENKVGIVTGS-GGGIGQAYAEALAR-----------EGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKA 75 (253)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHH
T ss_pred CCCEEEEECC-CChHHHHHHHHHHH-----------CCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHH
Confidence 3567777775 57788888887742 35789999987631 12357789999999876665
Q ss_pred HHhhcC--CccccEEEeCCCC
Q 021161 111 VIRHFD--GCKADLVVCDGAP 129 (316)
Q Consensus 111 I~~~~~--~~~~DlVvsDgap 129 (316)
+.+... .+.+|+|+.+.+.
T Consensus 76 ~~~~~~~~~g~id~li~~Ag~ 96 (253)
T 3qiv_A 76 MADRTLAEFGGIDYLVNNAAI 96 (253)
T ss_dssp HHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHcCCCCEEEECCCc
Confidence 544321 1379999998653
No 463
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=83.45 E-value=6.1 Score=34.92 Aligned_cols=77 Identities=12% Similarity=-0.005 Sum_probs=51.8
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----------------------CCCCcEEE
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------------------PIEGVIQV 98 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----------------------~i~gV~~i 98 (316)
.+++||=-|++ |++-..+++++.. .+.+|+.+|.++.. .-..+.++
T Consensus 9 ~~k~~lVTGas-~gIG~a~a~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (281)
T 3s55_A 9 EGKTALITGGA-RGMGRSHAVALAE-----------AGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISA 76 (281)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH-----------TTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHH-----------CCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEE
Confidence 35677777765 6778888887742 35789999986321 01357889
Q ss_pred ecCccChhhHHHHHhhcC--CccccEEEeCCCC
Q 021161 99 QGDITNARTAEVVIRHFD--GCKADLVVCDGAP 129 (316)
Q Consensus 99 ~gDIt~~~t~~~I~~~~~--~~~~DlVvsDgap 129 (316)
++|+++...++.+.+... -+++|++|.+.+.
T Consensus 77 ~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~ 109 (281)
T 3s55_A 77 KVDVKDRAALESFVAEAEDTLGGIDIAITNAGI 109 (281)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHTCCCEEEECCCC
T ss_pred eCCCCCHHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 999999876655543321 1379999998753
No 464
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=83.35 E-value=6.4 Score=34.03 Aligned_cols=74 Identities=12% Similarity=0.092 Sum_probs=53.2
Q ss_pred CCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCC-----CCCCCcEEEecCccChhhHHHHHhhcC
Q 021161 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-----APIEGVIQVQGDITNARTAEVVIRHFD 116 (316)
Q Consensus 42 ~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~-----~~i~gV~~i~gDIt~~~t~~~I~~~~~ 116 (316)
+++||=.| |.|+.-..+++++.. .+.+|+.+|.++. ..+.++.++++|+++...++++.+.+
T Consensus 6 ~k~vlVTG-as~gIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~- 72 (246)
T 2ag5_A 6 GKVIILTA-AAQGIGQAAALAFAR-----------EGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEV- 72 (246)
T ss_dssp TCEEEESS-TTSHHHHHHHHHHHH-----------TTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHC-
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHH-----------CCCEEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHHh-
Confidence 45666665 557788888887741 2468999988752 12347888999999998877776665
Q ss_pred CccccEEEeCCCC
Q 021161 117 GCKADLVVCDGAP 129 (316)
Q Consensus 117 ~~~~DlVvsDgap 129 (316)
+.+|+|+.+.+.
T Consensus 73 -~~id~lv~~Ag~ 84 (246)
T 2ag5_A 73 -ERLDVLFNVAGF 84 (246)
T ss_dssp -SCCSEEEECCCC
T ss_pred -CCCCEEEECCcc
Confidence 369999998653
No 465
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=83.19 E-value=11 Score=30.67 Aligned_cols=70 Identities=13% Similarity=0.028 Sum_probs=50.6
Q ss_pred CeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC--C--CCCcEEEecCccChhhHHHHHhhcCCc
Q 021161 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--P--IEGVIQVQGDITNARTAEVVIRHFDGC 118 (316)
Q Consensus 43 ~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~--~--i~gV~~i~gDIt~~~t~~~I~~~~~~~ 118 (316)
++||=.| |+|.....+++.+.. .+.+|++++..+.. . ..++.++++|+++.+.+..+ +.
T Consensus 4 ~~ilVtG-atG~iG~~l~~~l~~-----------~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~---~~-- 66 (206)
T 1hdo_A 4 KKIAIFG-ATGQTGLTTLAQAVQ-----------AGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKT---VA-- 66 (206)
T ss_dssp CEEEEES-TTSHHHHHHHHHHHH-----------TTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHH---HT--
T ss_pred CEEEEEc-CCcHHHHHHHHHHHH-----------CCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHH---Hc--
Confidence 5777776 568888888887741 24689999987642 1 35789999999998765544 33
Q ss_pred cccEEEeCCCC
Q 021161 119 KADLVVCDGAP 129 (316)
Q Consensus 119 ~~DlVvsDgap 129 (316)
.+|.|++..+.
T Consensus 67 ~~d~vi~~a~~ 77 (206)
T 1hdo_A 67 GQDAVIVLLGT 77 (206)
T ss_dssp TCSEEEECCCC
T ss_pred CCCEEEECccC
Confidence 48999988654
No 466
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=83.13 E-value=2.8 Score=39.25 Aligned_cols=103 Identities=12% Similarity=0.063 Sum_probs=66.1
Q ss_pred CCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC--------C--------------------
Q 021161 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------P-------------------- 91 (316)
Q Consensus 40 ~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~--------~-------------------- 91 (316)
.+...||.||||.......|.... ++.+++-||+-.+. .
T Consensus 96 ~~~~qVV~LGaGlDTr~~RL~~~~-------------~~~~~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~ 162 (334)
T 1rjd_A 96 NEKVQVVNLGCGSDLRMLPLLQMF-------------PHLAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAKSPF 162 (334)
T ss_dssp CSSEEEEEETCTTCCTHHHHHHHC-------------TTEEEEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTE
T ss_pred CCCcEEEEeCCCCccHHHHhcCcC-------------CCCEEEECCCHHHHHHHHHHhhhccchhhhccccccccccccc
Confidence 356799999999999888887653 24689999984421 0
Q ss_pred ---CCCcEEEecCccChhhHHHHHhhc-CCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEE
Q 021161 92 ---IEGVIQVQGDITNARTAEVVIRHF-DGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (316)
Q Consensus 92 ---i~gV~~i~gDIt~~~t~~~I~~~~-~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~ 165 (316)
-++.+.+-+|+++......++... ......++++-|.. .-+++.... +.+..+...+ |||.|++
T Consensus 163 ~~~~~~~~~v~~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL-----~YL~~~~~~----~ll~~ia~~~-~~~~~v~ 230 (334)
T 1rjd_A 163 LIDQGRYKLAACDLNDITETTRLLDVCTKREIPTIVISECLL-----CYMHNNESQ----LLINTIMSKF-SHGLWIS 230 (334)
T ss_dssp EEECSSEEEEECCTTCHHHHHHHHHTTCCTTSCEEEEEESCG-----GGSCHHHHH----HHHHHHHHHC-SSEEEEE
T ss_pred ccCCCceEEEecCCCCcHHHHHHHHhcCCCCCCEEEEEcchh-----hCCCHHHHH----HHHHHHHhhC-CCcEEEE
Confidence 146788899999976655544443 33567889987742 113333232 3344444444 7888864
No 467
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=83.10 E-value=3.2 Score=34.92 Aligned_cols=67 Identities=13% Similarity=0.010 Sum_probs=48.3
Q ss_pred eEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----CCCCcEEEecCccChhhHHHHHhhcCCcc
Q 021161 44 RVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNARTAEVVIRHFDGCK 119 (316)
Q Consensus 44 rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----~i~gV~~i~gDIt~~~t~~~I~~~~~~~~ 119 (316)
+||=.| |+|..-..+++.+.. .+.+|++++..+.. .-++++++++|+++... +.+ ..
T Consensus 2 kilVtG-atG~iG~~l~~~L~~-----------~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~-----~~~--~~ 62 (224)
T 3h2s_A 2 KIAVLG-ATGRAGSAIVAEARR-----------RGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTE-----ADL--DS 62 (224)
T ss_dssp EEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCH-----HHH--TT
T ss_pred EEEEEc-CCCHHHHHHHHHHHH-----------CCCEEEEEEecccccccccCCCceEEecccccccH-----hhc--cc
Confidence 566555 578888898888741 24689999987632 12589999999999875 223 35
Q ss_pred ccEEEeCCCC
Q 021161 120 ADLVVCDGAP 129 (316)
Q Consensus 120 ~DlVvsDgap 129 (316)
+|.|++..+.
T Consensus 63 ~d~vi~~ag~ 72 (224)
T 3h2s_A 63 VDAVVDALSV 72 (224)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCcc
Confidence 8999998754
No 468
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=83.05 E-value=0.97 Score=42.01 Aligned_cols=97 Identities=8% Similarity=0.000 Sum_probs=57.8
Q ss_pred cCCCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----CCCCcEEEecCccChhhHHHHHhh
Q 021161 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNARTAEVVIRH 114 (316)
Q Consensus 39 ~~~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----~i~gV~~i~gDIt~~~t~~~I~~~ 114 (316)
++++.+||-.|++ |+.-+.+.+.... .+.+|+++|.++.. .--|... ..|..+....+.+.+.
T Consensus 160 ~~~g~~vlV~Ga~-ggiG~~~~~~a~~-----------~Ga~Vi~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~ 226 (354)
T 2j8z_A 160 VQAGDYVLIHAGL-SGVGTAAIQLTRM-----------AGAIPLVTAGSQKKLQMAEKLGAAA-GFNYKKEDFSEATLKF 226 (354)
T ss_dssp CCTTCEEEESSTT-SHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHTCSE-EEETTTSCHHHHHHHH
T ss_pred CCCCCEEEEECCc-cHHHHHHHHHHHH-----------cCCEEEEEeCCHHHHHHHHHcCCcE-EEecCChHHHHHHHHH
Confidence 4678999988753 4455544443320 13689999987631 0012221 1244454555566665
Q ss_pred cCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEEE
Q 021161 115 FDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (316)
Q Consensus 115 ~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~K 166 (316)
..+..+|+|+... |.. .+..+.++|++||+++.-
T Consensus 227 ~~~~~~d~vi~~~-----G~~-------------~~~~~~~~l~~~G~iv~~ 260 (354)
T 2j8z_A 227 TKGAGVNLILDCI-----GGS-------------YWEKNVNCLALDGRWVLY 260 (354)
T ss_dssp TTTSCEEEEEESS-----CGG-------------GHHHHHHHEEEEEEEEEC
T ss_pred hcCCCceEEEECC-----Cch-------------HHHHHHHhccCCCEEEEE
Confidence 5556799999643 321 134567899999999873
No 469
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=82.91 E-value=1.7 Score=37.92 Aligned_cols=75 Identities=16% Similarity=0.087 Sum_probs=50.7
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeC-CCCC------C----CCCcEEEecCccChhhHH
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDL-QPMA------P----IEGVIQVQGDITNARTAE 109 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl-~~~~------~----i~gV~~i~gDIt~~~t~~ 109 (316)
.+++||=.| |.|+.-..+++++.. .+.+|++++. .+.. . -..+.++++|+++...+.
T Consensus 20 ~~k~vlItG-asggiG~~la~~l~~-----------~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~ 87 (274)
T 1ja9_A 20 AGKVALTTG-AGRGIGRGIAIELGR-----------RGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVV 87 (274)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHH-----------TTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHH
T ss_pred CCCEEEEeC-CCchHHHHHHHHHHH-----------CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence 356777555 568889999888742 2468999887 3211 0 135778999999987665
Q ss_pred HHHh----hcCCccccEEEeCCCC
Q 021161 110 VVIR----HFDGCKADLVVCDGAP 129 (316)
Q Consensus 110 ~I~~----~~~~~~~DlVvsDgap 129 (316)
.+.+ ++ +.+|+|+.+.+.
T Consensus 88 ~~~~~~~~~~--~~~d~vi~~Ag~ 109 (274)
T 1ja9_A 88 ALFDKAVSHF--GGLDFVMSNSGM 109 (274)
T ss_dssp HHHHHHHHHH--SCEEEEECCCCC
T ss_pred HHHHHHHHHc--CCCCEEEECCCC
Confidence 5443 33 369999988653
No 470
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=82.83 E-value=3.1 Score=37.02 Aligned_cols=74 Identities=12% Similarity=0.065 Sum_probs=50.1
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCCcEEEecCccChhhHH
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTAE 109 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~gV~~i~gDIt~~~t~~ 109 (316)
.+++||=.| |.|+.-..+++.+.. .+.+|++++.++.. .-..+.++++|+++...++
T Consensus 27 ~~k~vlITG-asggIG~~la~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~ 94 (286)
T 1xu9_A 27 QGKKVIVTG-ASKGIGREMAYHLAK-----------MGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAE 94 (286)
T ss_dssp TTCEEEESS-CSSHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHH-----------CCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHH
Confidence 356777666 557888888887741 24689999987531 0124788999999987665
Q ss_pred HHHhhcC--CccccEEEeC
Q 021161 110 VVIRHFD--GCKADLVVCD 126 (316)
Q Consensus 110 ~I~~~~~--~~~~DlVvsD 126 (316)
.+.+... .+.+|+||.+
T Consensus 95 ~~~~~~~~~~g~iD~li~n 113 (286)
T 1xu9_A 95 QFVAQAGKLMGGLDMLILN 113 (286)
T ss_dssp HHHHHHHHHHTSCSEEEEC
T ss_pred HHHHHHHHHcCCCCEEEEC
Confidence 5443221 1379999988
No 471
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=82.76 E-value=2.6 Score=37.31 Aligned_cols=75 Identities=15% Similarity=0.080 Sum_probs=51.2
Q ss_pred CCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC------CC-CCcEEEecCccChhhHHHHHhh
Q 021161 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PI-EGVIQVQGDITNARTAEVVIRH 114 (316)
Q Consensus 42 ~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~------~i-~gV~~i~gDIt~~~t~~~I~~~ 114 (316)
+++||=.|+ .|+.-..+++++.. .+.+|+.++.++.. .+ .++..+++|+++.+.++.+.+.
T Consensus 6 ~k~vlITGa-s~gIG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 73 (263)
T 2a4k_A 6 GKTILVTGA-ASGIGRAALDLFAR-----------EGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAE 73 (263)
T ss_dssp TCEEEEEST-TSHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEEEECC-CCHHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHH
Confidence 456776765 57788888887742 34689999887521 12 3578899999998766554432
Q ss_pred cC--CccccEEEeCCC
Q 021161 115 FD--GCKADLVVCDGA 128 (316)
Q Consensus 115 ~~--~~~~DlVvsDga 128 (316)
.. -+++|+||.+.+
T Consensus 74 ~~~~~g~iD~lvnnAg 89 (263)
T 2a4k_A 74 ALEEFGRLHGVAHFAG 89 (263)
T ss_dssp HHHHHSCCCEEEEGGG
T ss_pred HHHHcCCCcEEEECCC
Confidence 11 136999999864
No 472
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=82.70 E-value=4.2 Score=36.19 Aligned_cols=76 Identities=11% Similarity=-0.005 Sum_probs=52.4
Q ss_pred CCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC------C-----CCCcEEEecCccChhhHHH
Q 021161 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------P-----IEGVIQVQGDITNARTAEV 110 (316)
Q Consensus 42 ~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~------~-----i~gV~~i~gDIt~~~t~~~ 110 (316)
+++||=.|+ .|+.-..+++++.. .+.+|++++.++.. . -.++.++++|+++...+..
T Consensus 26 ~k~vlITGa-sggiG~~la~~L~~-----------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~ 93 (302)
T 1w6u_A 26 GKVAFITGG-GTGLGKGMTTLLSS-----------LGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQN 93 (302)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHH
T ss_pred CCEEEEECC-CchHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHH
Confidence 467777774 57888888888742 24689999987531 0 2358889999999876655
Q ss_pred HHhhc--CCccccEEEeCCCC
Q 021161 111 VIRHF--DGCKADLVVCDGAP 129 (316)
Q Consensus 111 I~~~~--~~~~~DlVvsDgap 129 (316)
+.+.. ..+++|+|+.+.+.
T Consensus 94 ~~~~~~~~~g~id~li~~Ag~ 114 (302)
T 1w6u_A 94 TVSELIKVAGHPNIVINNAAG 114 (302)
T ss_dssp HHHHHHHHTCSCSEEEECCCC
T ss_pred HHHHHHHHcCCCCEEEECCCC
Confidence 44322 11378999998753
No 473
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=82.61 E-value=15 Score=32.11 Aligned_cols=77 Identities=22% Similarity=0.090 Sum_probs=53.2
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCC-CCCcEEEecCccChhhHHHHHhhcC--C
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-IEGVIQVQGDITNARTAEVVIRHFD--G 117 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~-i~gV~~i~gDIt~~~t~~~I~~~~~--~ 117 (316)
.+++||=.| |.|+.-..+++++.. .+.+|+.+|.+.... -..+.++++|+++...++.+.+... -
T Consensus 27 ~~k~vlVTG-as~gIG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 94 (260)
T 3un1_A 27 QQKVVVITG-ASQGIGAGLVRAYRD-----------RNYRVVATSRSIKPSADPDIHTVAGDISKPETADRIVREGIERF 94 (260)
T ss_dssp TCCEEEESS-CSSHHHHHHHHHHHH-----------TTCEEEEEESSCCCCSSTTEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCCHHHHHHHHHHHH-----------CCCEEEEEeCChhhcccCceEEEEccCCCHHHHHHHHHHHHHHC
Confidence 345676666 557788888887742 357899999876432 3468899999999887665543221 1
Q ss_pred ccccEEEeCCCC
Q 021161 118 CKADLVVCDGAP 129 (316)
Q Consensus 118 ~~~DlVvsDgap 129 (316)
+++|+|+.+.+.
T Consensus 95 g~iD~lv~nAg~ 106 (260)
T 3un1_A 95 GRIDSLVNNAGV 106 (260)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 379999998653
No 474
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=82.50 E-value=2.6 Score=37.45 Aligned_cols=76 Identities=7% Similarity=-0.104 Sum_probs=52.2
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-----------CCCCcEEEecCccChhhHH
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTAE 109 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-----------~i~gV~~i~gDIt~~~t~~ 109 (316)
.+++||=.|+ .|+.-..+++++.. .+.+|+.+|.+... .-..+.++++|+++....+
T Consensus 26 ~~k~~lVTGa-s~GIG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~ 93 (277)
T 4fc7_A 26 RDKVAFITGG-GSGIGFRIAEIFMR-----------HGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVM 93 (277)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHT-----------TTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHH
T ss_pred CCCEEEEeCC-CchHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHH
Confidence 3567777775 57788888888742 35789999987531 0235788999999987655
Q ss_pred HHHhhcC--CccccEEEeCCC
Q 021161 110 VVIRHFD--GCKADLVVCDGA 128 (316)
Q Consensus 110 ~I~~~~~--~~~~DlVvsDga 128 (316)
.+.+... .+++|+||.+.+
T Consensus 94 ~~~~~~~~~~g~id~lv~nAg 114 (277)
T 4fc7_A 94 AAVDQALKEFGRIDILINCAA 114 (277)
T ss_dssp HHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHcCCCCEEEECCc
Confidence 5443221 137999999875
No 475
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=82.29 E-value=7.4 Score=33.94 Aligned_cols=77 Identities=19% Similarity=0.126 Sum_probs=51.7
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-------------CCCCcEEEecCccChhh
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-------------PIEGVIQVQGDITNART 107 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-------------~i~gV~~i~gDIt~~~t 107 (316)
.++++|=-|++ |+.-..+++++.. .+.+|+.++.++.. ....+.++++|+++...
T Consensus 6 ~~k~~lVTGas-~GIG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 73 (250)
T 3nyw_A 6 QKGLAIITGAS-QGIGAVIAAGLAT-----------DGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTK 73 (250)
T ss_dssp CCCEEEEESTT-SHHHHHHHHHHHH-----------HTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHH-----------CCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHH
Confidence 35677777765 6677777777641 24689999987631 11567889999999876
Q ss_pred HHHHHhhcC--CccccEEEeCCCC
Q 021161 108 AEVVIRHFD--GCKADLVVCDGAP 129 (316)
Q Consensus 108 ~~~I~~~~~--~~~~DlVvsDgap 129 (316)
.+.+.+... .+++|+||.+.+.
T Consensus 74 v~~~~~~~~~~~g~iD~lvnnAg~ 97 (250)
T 3nyw_A 74 ADTEIKDIHQKYGAVDILVNAAAM 97 (250)
T ss_dssp HHHHHHHHHHHHCCEEEEEECCCC
T ss_pred HHHHHHHHHHhcCCCCEEEECCCc
Confidence 655443221 1379999999754
No 476
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=82.19 E-value=4.2 Score=35.59 Aligned_cols=77 Identities=9% Similarity=-0.001 Sum_probs=52.9
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCC----------CCCcEEEecCccChhhHHH
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----------IEGVIQVQGDITNARTAEV 110 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~----------i~gV~~i~gDIt~~~t~~~ 110 (316)
.+++||=.|++ |++-..+++++.. .+.+|+.+|.++... -..+.++++|+++.+.++.
T Consensus 6 ~~k~vlVTGas-~GIG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 73 (252)
T 3h7a_A 6 RNATVAVIGAG-DYIGAEIAKKFAA-----------EGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTA 73 (252)
T ss_dssp CSCEEEEECCS-SHHHHHHHHHHHH-----------TTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHH
Confidence 35667767755 6678888887742 357899999876421 1357889999999887666
Q ss_pred HHhhcC-CccccEEEeCCCC
Q 021161 111 VIRHFD-GCKADLVVCDGAP 129 (316)
Q Consensus 111 I~~~~~-~~~~DlVvsDgap 129 (316)
+.+.+. .++.|++|.+.+.
T Consensus 74 ~~~~~~~~g~id~lv~nAg~ 93 (252)
T 3h7a_A 74 FLNAADAHAPLEVTIFNVGA 93 (252)
T ss_dssp HHHHHHHHSCEEEEEECCCC
T ss_pred HHHHHHhhCCceEEEECCCc
Confidence 554321 1479999998753
No 477
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=82.16 E-value=6.9 Score=33.45 Aligned_cols=75 Identities=19% Similarity=0.127 Sum_probs=53.5
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC------CCCCcEEEecCccChhhHHHHHhh
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIRH 114 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~------~i~gV~~i~gDIt~~~t~~~I~~~ 114 (316)
.+++||=.|+ .|+.-..+++++.. .+.+|+.++.++.. .++++.++++|+++...++.+.+.
T Consensus 6 ~~k~vlITGa-sggiG~~~a~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 73 (244)
T 3d3w_A 6 AGRRVLVTGA-GKGIGRGTVQALHA-----------TGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGS 73 (244)
T ss_dssp TTCEEEEEST-TSHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTT
T ss_pred CCcEEEEECC-CcHHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHH
Confidence 3567776665 57788888887741 24689999887521 145778889999998877766653
Q ss_pred cCCccccEEEeCCCC
Q 021161 115 FDGCKADLVVCDGAP 129 (316)
Q Consensus 115 ~~~~~~DlVvsDgap 129 (316)
+ +++|+|+.+.+.
T Consensus 74 ~--~~id~vi~~Ag~ 86 (244)
T 3d3w_A 74 V--GPVDLLVNNAAV 86 (244)
T ss_dssp C--CCCCEEEECCCC
T ss_pred c--CCCCEEEECCcc
Confidence 3 469999998653
No 478
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=82.15 E-value=8.7 Score=33.07 Aligned_cols=77 Identities=14% Similarity=0.104 Sum_probs=52.5
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----------CCCCcEEEecCccChhhHHH
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTAEV 110 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----------~i~gV~~i~gDIt~~~t~~~ 110 (316)
.+++||=.| |.|+....+++++.. .+.+|+.+|.++.. .-..+.++++|+++...++.
T Consensus 12 ~~k~vlItG-asggiG~~la~~l~~-----------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~ 79 (260)
T 3awd_A 12 DNRVAIVTG-GAQNIGLACVTALAE-----------AGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQN 79 (260)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEeC-CCchHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHH
Confidence 356777777 458888888888742 24689999987521 01358889999999876655
Q ss_pred HHhhcC--CccccEEEeCCCC
Q 021161 111 VIRHFD--GCKADLVVCDGAP 129 (316)
Q Consensus 111 I~~~~~--~~~~DlVvsDgap 129 (316)
+.+... .+.+|+|+...+.
T Consensus 80 ~~~~~~~~~~~id~vi~~Ag~ 100 (260)
T 3awd_A 80 AVRSVHEQEGRVDILVACAGI 100 (260)
T ss_dssp HHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHcCCCCEEEECCCC
Confidence 543221 1369999998653
No 479
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=81.98 E-value=5.4 Score=34.74 Aligned_cols=69 Identities=14% Similarity=0.122 Sum_probs=49.6
Q ss_pred eEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCC-CCCcEEEecCccChhhHHHHHhhcCCccccE
Q 021161 44 RVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-IEGVIQVQGDITNARTAEVVIRHFDGCKADL 122 (316)
Q Consensus 44 rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~-i~gV~~i~gDIt~~~t~~~I~~~~~~~~~Dl 122 (316)
+||=.| |+|.....+++++.. .+.+|++++..+... ..++.++++|+++...+..+. . .+|.
T Consensus 4 ~ilVtG-atG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~~~---~--~~d~ 66 (267)
T 3ay3_A 4 RLLVTG-AAGGVGSAIRPHLGT-----------LAHEVRLSDIVDLGAAEAHEEIVACDLADAQAVHDLV---K--DCDG 66 (267)
T ss_dssp EEEEES-TTSHHHHHHGGGGGG-----------TEEEEEECCSSCCCCCCTTEEECCCCTTCHHHHHHHH---T--TCSE
T ss_pred eEEEEC-CCCHHHHHHHHHHHh-----------CCCEEEEEeCCCccccCCCccEEEccCCCHHHHHHHH---c--CCCE
Confidence 566555 568899999888742 236899999877532 257889999999987655543 2 4899
Q ss_pred EEeCCCC
Q 021161 123 VVCDGAP 129 (316)
Q Consensus 123 VvsDgap 129 (316)
|+...+.
T Consensus 67 vi~~a~~ 73 (267)
T 3ay3_A 67 IIHLGGV 73 (267)
T ss_dssp EEECCSC
T ss_pred EEECCcC
Confidence 9998654
No 480
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=81.91 E-value=1.8 Score=38.51 Aligned_cols=76 Identities=11% Similarity=0.034 Sum_probs=51.3
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC---------CC----CCcEEEecCccChhh
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PI----EGVIQVQGDITNART 107 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~---------~i----~gV~~i~gDIt~~~t 107 (316)
.+++||=-|+ .|+.-..+++++.. .+.+|+.+|.++.. .. ..+.++++|+++...
T Consensus 10 ~~k~vlVTGa-s~gIG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~ 77 (281)
T 3svt_A 10 QDRTYLVTGG-GSGIGKGVAAGLVA-----------AGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDE 77 (281)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHH
Confidence 3567777775 56777788877641 35789999987531 01 157889999999876
Q ss_pred HHHHHhhcC--CccccEEEeCCC
Q 021161 108 AEVVIRHFD--GCKADLVVCDGA 128 (316)
Q Consensus 108 ~~~I~~~~~--~~~~DlVvsDga 128 (316)
.+.+.+... .++.|+||.+.+
T Consensus 78 v~~~~~~~~~~~g~id~lv~nAg 100 (281)
T 3svt_A 78 TARAVDAVTAWHGRLHGVVHCAG 100 (281)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCC
Confidence 655544321 136999999875
No 481
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=81.85 E-value=4.1 Score=36.18 Aligned_cols=111 Identities=14% Similarity=0.081 Sum_probs=65.3
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC---C--------CCCcEEEecCccChhhHH
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---P--------IEGVIQVQGDITNARTAE 109 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~---~--------i~gV~~i~gDIt~~~t~~ 109 (316)
.+++||=.| |.|+.-..+++++.. .+.+|+.++..... . -..+.++++|+++...+.
T Consensus 28 ~~k~vlVTG-as~gIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 95 (283)
T 1g0o_A 28 EGKVALVTG-AGRGIGREMAMELGR-----------RGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIV 95 (283)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHH-----------TTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHH-----------CCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHH
Confidence 345666666 467788888888742 35789998887531 0 125788899999987655
Q ss_pred HHHh----hcCCccccEEEeCCCCCCCC-CCCcc--HH---HHHHHH--HHHHHHHHHcccCCcEEEE
Q 021161 110 VVIR----HFDGCKADLVVCDGAPDVTG-LHDMD--EF---VQSQLI--LAGLTVVTHVLKEGGKFIA 165 (316)
Q Consensus 110 ~I~~----~~~~~~~DlVvsDgapdvtG-~~~~d--e~---~~~~L~--~aaL~~a~~vLkpGG~fV~ 165 (316)
.+.+ .+ +.+|+||.+.+....+ +.+.+ ++ +...+. ...++.+...|+.+|++|.
T Consensus 96 ~~~~~~~~~~--g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~ 161 (283)
T 1g0o_A 96 RMFEEAVKIF--GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLIL 161 (283)
T ss_dssp HHHHHHHHHH--SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEE
T ss_pred HHHHHHHHHc--CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEE
Confidence 5443 33 3699999987532221 11221 11 111111 2233444555667888886
No 482
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=81.65 E-value=9 Score=34.05 Aligned_cols=77 Identities=13% Similarity=0.132 Sum_probs=52.2
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC------C-CCCcEEEecCccChhhHHHHHh
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------P-IEGVIQVQGDITNARTAEVVIR 113 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~------~-i~gV~~i~gDIt~~~t~~~I~~ 113 (316)
.+++||=-|++ |++-..+++++.. .+.+|+.+|.++.. . -..+.++++|+++....+.+.+
T Consensus 26 ~~k~vlVTGas-~GIG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 93 (277)
T 4dqx_A 26 NQRVCIVTGGG-SGIGRATAELFAK-----------NGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVE 93 (277)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH-----------TTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHH
Confidence 35677777755 6778888877742 35789999987631 1 1357889999999877655544
Q ss_pred hcC--CccccEEEeCCCC
Q 021161 114 HFD--GCKADLVVCDGAP 129 (316)
Q Consensus 114 ~~~--~~~~DlVvsDgap 129 (316)
... .+++|+||.+.+.
T Consensus 94 ~~~~~~g~iD~lv~nAg~ 111 (277)
T 4dqx_A 94 KTTAKWGRVDVLVNNAGF 111 (277)
T ss_dssp HHHHHHSCCCEEEECCCC
T ss_pred HHHHHcCCCCEEEECCCc
Confidence 321 1379999999753
No 483
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=81.56 E-value=25 Score=31.58 Aligned_cols=73 Identities=12% Similarity=0.044 Sum_probs=51.3
Q ss_pred CeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCC-----CEEEEEeCCCCCC---CCCcEEEecCccChhhHHHHHhh
Q 021161 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDL-----PLIVAIDLQPMAP---IEGVIQVQGDITNARTAEVVIRH 114 (316)
Q Consensus 43 ~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~-----~~IvaVDl~~~~~---i~gV~~i~gDIt~~~t~~~I~~~ 114 (316)
++||=.| |+|....++.+.+.. .+ .+|++++..+... ..+++++++|+++...+..+++.
T Consensus 2 ~~vlVtG-atG~iG~~l~~~L~~-----------~g~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 69 (364)
T 2v6g_A 2 SVALIVG-VTGIIGNSLAEILPL-----------ADTPGGPWKVYGVARRTRPAWHEDNPINYVQCDISDPDDSQAKLSP 69 (364)
T ss_dssp EEEEEET-TTSHHHHHHHHHTTS-----------TTCTTCSEEEEEEESSCCCSCCCSSCCEEEECCTTSHHHHHHHHTT
T ss_pred CEEEEEC-CCcHHHHHHHHHHHh-----------CCCCCCceEEEEEeCCCCccccccCceEEEEeecCCHHHHHHHHhc
Confidence 4566565 579999999988852 23 5899999876532 35789999999998765554432
Q ss_pred cCCccccEEEeCCCC
Q 021161 115 FDGCKADLVVCDGAP 129 (316)
Q Consensus 115 ~~~~~~DlVvsDgap 129 (316)
. ..+|.|+.-++.
T Consensus 70 ~--~~~d~vih~a~~ 82 (364)
T 2v6g_A 70 L--TDVTHVFYVTWA 82 (364)
T ss_dssp C--TTCCEEEECCCC
T ss_pred C--CCCCEEEECCCC
Confidence 1 139999987653
No 484
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=81.53 E-value=4.8 Score=37.04 Aligned_cols=72 Identities=18% Similarity=-0.011 Sum_probs=50.5
Q ss_pred CeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC-------CC--------C-CcEEEecCccChh
Q 021161 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-------PI--------E-GVIQVQGDITNAR 106 (316)
Q Consensus 43 ~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~-------~i--------~-gV~~i~gDIt~~~ 106 (316)
++||=.| |+|.....+++++.. .+.+|++++..+.. .+ + ++.++.+|+++..
T Consensus 29 k~vlVtG-atG~IG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~ 96 (381)
T 1n7h_A 29 KIALITG-ITGQDGSYLTEFLLG-----------KGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDAS 96 (381)
T ss_dssp CEEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHH
T ss_pred CeEEEEc-CCchHHHHHHHHHHH-----------CCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHH
Confidence 4788777 568888898887741 24689999876532 11 2 7889999999987
Q ss_pred hHHHHHhhcCCccccEEEeCCCC
Q 021161 107 TAEVVIRHFDGCKADLVVCDGAP 129 (316)
Q Consensus 107 t~~~I~~~~~~~~~DlVvsDgap 129 (316)
.+..+++. ..+|.|+...+.
T Consensus 97 ~~~~~~~~---~~~d~Vih~A~~ 116 (381)
T 1n7h_A 97 SLRRWIDV---IKPDEVYNLAAQ 116 (381)
T ss_dssp HHHHHHHH---HCCSEEEECCSC
T ss_pred HHHHHHHh---cCCCEEEECCcc
Confidence 66555432 258999987653
No 485
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=81.51 E-value=3.4 Score=36.49 Aligned_cols=77 Identities=10% Similarity=-0.031 Sum_probs=52.6
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC--C--------CCCcEEEecCccChhhHHH
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--P--------IEGVIQVQGDITNARTAEV 110 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~--~--------i~gV~~i~gDIt~~~t~~~ 110 (316)
.+++||=.| |.|+....+++.+.. .+.+|+++|..+.. . -.++.++++|+++...+..
T Consensus 30 ~~k~vlITG-asggIG~~la~~L~~-----------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~ 97 (272)
T 1yb1_A 30 TGEIVLITG-AGHGIGRLTAYEFAK-----------LKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYS 97 (272)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEEC-CCchHHHHHHHHHHH-----------CCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHH
Confidence 356777777 457888888887742 24689999987531 0 1357889999999876655
Q ss_pred HHhhcC--CccccEEEeCCCC
Q 021161 111 VIRHFD--GCKADLVVCDGAP 129 (316)
Q Consensus 111 I~~~~~--~~~~DlVvsDgap 129 (316)
+.+.+. -+.+|+||.+.+.
T Consensus 98 ~~~~~~~~~g~iD~li~~Ag~ 118 (272)
T 1yb1_A 98 SAKKVKAEIGDVSILVNNAGV 118 (272)
T ss_dssp HHHHHHHHTCCCSEEEECCCC
T ss_pred HHHHHHHHCCCCcEEEECCCc
Confidence 543221 1369999998754
No 486
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=81.47 E-value=4.9 Score=37.11 Aligned_cols=72 Identities=17% Similarity=0.016 Sum_probs=51.6
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCC-CEEEEEeCCCCCC------CCCcEEEecCccChhhHHHHHh
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDL-PLIVAIDLQPMAP------IEGVIQVQGDITNARTAEVVIR 113 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~-~~IvaVDl~~~~~------i~gV~~i~gDIt~~~t~~~I~~ 113 (316)
.+++||=.| |+|.....+++.+.. .+ .+|++++..+... .+++.++++|+++...+..
T Consensus 31 ~~~~ilVtG-atG~iG~~l~~~L~~-----------~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~--- 95 (377)
T 2q1s_A 31 ANTNVMVVG-GAGFVGSNLVKRLLE-----------LGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLAS--- 95 (377)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHH-----------TTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHH---
T ss_pred CCCEEEEEC-CccHHHHHHHHHHHH-----------cCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHH---
Confidence 356888776 568888998887741 24 6899999876431 3578999999999765433
Q ss_pred hcCCccccEEEeCCCC
Q 021161 114 HFDGCKADLVVCDGAP 129 (316)
Q Consensus 114 ~~~~~~~DlVvsDgap 129 (316)
.+. .+|.|+...+.
T Consensus 96 ~~~--~~d~Vih~A~~ 109 (377)
T 2q1s_A 96 LQD--EYDYVFHLATY 109 (377)
T ss_dssp CCS--CCSEEEECCCC
T ss_pred Hhh--CCCEEEECCCc
Confidence 343 69999987653
No 487
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=81.45 E-value=2.2 Score=39.40 Aligned_cols=95 Identities=17% Similarity=0.022 Sum_probs=57.1
Q ss_pred cCCC--CeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCC-EEEEEeCCCCC-----CCCCcEEEecCccChhhHHH
Q 021161 39 FEGV--KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLP-LIVAIDLQPMA-----PIEGVIQVQGDITNARTAEV 110 (316)
Q Consensus 39 ~~~~--~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~-~IvaVDl~~~~-----~i~gV~~i~gDIt~~~t~~~ 110 (316)
++++ .+||=.|++ |+.-+.+.+.... .+. +|+++|.++.. .--|... ..|..+....+.
T Consensus 156 ~~~g~~~~vlI~Gas-ggiG~~~~~~a~~-----------~Ga~~Vi~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~ 222 (357)
T 2zb4_A 156 ITAGSNKTMVVSGAA-GACGSVAGQIGHF-----------LGCSRVVGICGTHEKCILLTSELGFDA-AINYKKDNVAEQ 222 (357)
T ss_dssp CCTTSCCEEEESSTT-BHHHHHHHHHHHH-----------TTCSEEEEEESCHHHHHHHHHTSCCSE-EEETTTSCHHHH
T ss_pred CCCCCccEEEEECCC-cHHHHHHHHHHHH-----------CCCCeEEEEeCCHHHHHHHHHHcCCce-EEecCchHHHHH
Confidence 4678 899999873 4444444433210 135 89999987521 1123321 125555444555
Q ss_pred HHhhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEE
Q 021161 111 VIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (316)
Q Consensus 111 I~~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~ 165 (316)
+.+...+ .+|+|+.. .|. ..+..+.++|++||++|.
T Consensus 223 ~~~~~~~-~~d~vi~~-----~G~-------------~~~~~~~~~l~~~G~iv~ 258 (357)
T 2zb4_A 223 LRESCPA-GVDVYFDN-----VGG-------------NISDTVISQMNENSHIIL 258 (357)
T ss_dssp HHHHCTT-CEEEEEES-----CCH-------------HHHHHHHHTEEEEEEEEE
T ss_pred HHHhcCC-CCCEEEEC-----CCH-------------HHHHHHHHHhccCcEEEE
Confidence 5555444 79999964 331 235677899999999986
No 488
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=81.03 E-value=4.5 Score=35.66 Aligned_cols=75 Identities=12% Similarity=0.107 Sum_probs=53.6
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC------------CCCCcEEEecCccChhhH
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------------PIEGVIQVQGDITNARTA 108 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~------------~i~gV~~i~gDIt~~~t~ 108 (316)
.+++||=-|+ .|++-..+++++.. .+.+|+.+|.++.. +-..+..+++|+++...+
T Consensus 9 ~~k~~lVTGa-s~gIG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~ 76 (267)
T 3t4x_A 9 KGKTALVTGS-TAGIGKAIATSLVA-----------EGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGC 76 (267)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHH-----------TTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHH
Confidence 3456776664 57788888887742 35789999987631 012367789999999888
Q ss_pred HHHHhhcCCccccEEEeCCCC
Q 021161 109 EVVIRHFDGCKADLVVCDGAP 129 (316)
Q Consensus 109 ~~I~~~~~~~~~DlVvsDgap 129 (316)
+.+.+.+ +++|++|.+.+.
T Consensus 77 ~~~~~~~--g~id~lv~nAg~ 95 (267)
T 3t4x_A 77 QDVIEKY--PKVDILINNLGI 95 (267)
T ss_dssp HHHHHHC--CCCSEEEECCCC
T ss_pred HHHHHhc--CCCCEEEECCCC
Confidence 8887766 379999998653
No 489
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=80.91 E-value=9.7 Score=34.14 Aligned_cols=71 Identities=17% Similarity=0.154 Sum_probs=48.5
Q ss_pred CCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC--C---------CCCcEEEecCccChhhHHH
Q 021161 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--P---------IEGVIQVQGDITNARTAEV 110 (316)
Q Consensus 42 ~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~--~---------i~gV~~i~gDIt~~~t~~~ 110 (316)
+++||=.| |+|....++++++-. .+.+|++++..+.. . ..++.++++|+++...+..
T Consensus 9 ~~~vlVTG-atGfIG~~l~~~Ll~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~ 76 (338)
T 2rh8_A 9 KKTACVVG-GTGFVASLLVKLLLQ-----------KGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEA 76 (338)
T ss_dssp CCEEEEEC-TTSHHHHHHHHHHHH-----------TTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHH
T ss_pred CCEEEEEC-CchHHHHHHHHHHHH-----------CCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHH
Confidence 46777665 789999999888741 24678877665431 0 1368889999998765544
Q ss_pred HHhhcCCccccEEEeCCCC
Q 021161 111 VIRHFDGCKADLVVCDGAP 129 (316)
Q Consensus 111 I~~~~~~~~~DlVvsDgap 129 (316)
++ . .+|.|+...++
T Consensus 77 ~~---~--~~D~Vih~A~~ 90 (338)
T 2rh8_A 77 PI---A--GCDFVFHVATP 90 (338)
T ss_dssp HH---T--TCSEEEEESSC
T ss_pred HH---c--CCCEEEEeCCc
Confidence 33 2 48999987654
No 490
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=80.91 E-value=4.8 Score=35.83 Aligned_cols=69 Identities=13% Similarity=0.136 Sum_probs=34.3
Q ss_pred CCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCCCCCcEEEecCccChhhHHHHHhhcCCcccc
Q 021161 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKAD 121 (316)
Q Consensus 42 ~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~i~gV~~i~gDIt~~~t~~~I~~~~~~~~~D 121 (316)
+++||=.| |+|.....+++.+.. .+.+|++++..+.. ++ ++++|+++...+..+++. ..+|
T Consensus 2 ~~~vlVtG-atG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~--~~--~~~~Dl~d~~~~~~~~~~---~~~d 62 (315)
T 2ydy_A 2 NRRVLVTG-ATGLLGRAVHKEFQQ-----------NNWHAVGCGFRRAR--PK--FEQVNLLDSNAVHHIIHD---FQPH 62 (315)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHT-----------TTCEEEEEC----------------------CHHHHHH---HCCS
T ss_pred CCeEEEEC-CCcHHHHHHHHHHHh-----------CCCeEEEEccCCCC--CC--eEEecCCCHHHHHHHHHh---hCCC
Confidence 35677666 568889999888741 24689999876533 23 678999987655544432 2589
Q ss_pred EEEeCCCC
Q 021161 122 LVVCDGAP 129 (316)
Q Consensus 122 lVvsDgap 129 (316)
.|+...+.
T Consensus 63 ~vih~A~~ 70 (315)
T 2ydy_A 63 VIVHCAAE 70 (315)
T ss_dssp EEEECC--
T ss_pred EEEECCcc
Confidence 99988654
No 491
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=80.82 E-value=2.9 Score=38.57 Aligned_cols=91 Identities=12% Similarity=0.053 Sum_probs=52.4
Q ss_pred CCCeEEEEC-CCC-CHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----CCCCcEEEecCccChhhHHHHHhh
Q 021161 41 GVKRVVDLC-AAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNARTAEVVIRH 114 (316)
Q Consensus 41 ~~~rVLDLc-agP-G~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----~i~gV~~i~gDIt~~~t~~~I~~~ 114 (316)
++.+||=.| +|+ |.+...+++.. +++|+++|.++.. .--|...+. |..+ ...+.+.+.
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~--------------Ga~Vi~~~~~~~~~~~~~~lGa~~vi-~~~~-~~~~~~~~~ 213 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAY--------------GLRVITTASRNETIEWTKKMGADIVL-NHKE-SLLNQFKTQ 213 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--------------TCEEEEECCSHHHHHHHHHHTCSEEE-CTTS-CHHHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHc--------------CCEEEEEeCCHHHHHHHHhcCCcEEE-ECCc-cHHHHHHHh
Confidence 788999884 333 33343444443 3699999986631 001222111 2222 233445444
Q ss_pred cCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEEE
Q 021161 115 FDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (316)
Q Consensus 115 ~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV~ 165 (316)
.+..+|+|+- ++|. ...+..+.++|++||++|.
T Consensus 214 -~~~g~Dvv~d-----~~g~------------~~~~~~~~~~l~~~G~iv~ 246 (346)
T 3fbg_A 214 -GIELVDYVFC-----TFNT------------DMYYDDMIQLVKPRGHIAT 246 (346)
T ss_dssp -TCCCEEEEEE-----SSCH------------HHHHHHHHHHEEEEEEEEE
T ss_pred -CCCCccEEEE-----CCCc------------hHHHHHHHHHhccCCEEEE
Confidence 5668999995 2331 1235678899999999986
No 492
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=80.80 E-value=15 Score=32.49 Aligned_cols=67 Identities=21% Similarity=0.081 Sum_probs=45.0
Q ss_pred eEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCCC----CCCcEEEecCccChhhHHHHHhhcCCcc
Q 021161 44 RVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITNARTAEVVIRHFDGCK 119 (316)
Q Consensus 44 rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~~----i~gV~~i~gDIt~~~t~~~I~~~~~~~~ 119 (316)
+||=.| |+|..-..+++++.. .+.+++++...... ..++.++++|+++ ..+..+. . .
T Consensus 3 ~vlVTG-atG~iG~~l~~~L~~------------~g~~v~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~---~--~ 63 (313)
T 3ehe_A 3 LIVVTG-GAGFIGSHVVDKLSE------------SNEIVVIDNLSSGNEEFVNEAARLVKADLAA-DDIKDYL---K--G 63 (313)
T ss_dssp CEEEET-TTSHHHHHHHHHHTT------------TSCEEEECCCSSCCGGGSCTTEEEECCCTTT-SCCHHHH---T--T
T ss_pred EEEEEC-CCchHHHHHHHHHHh------------CCCEEEEEcCCCCChhhcCCCcEEEECcCCh-HHHHHHh---c--C
Confidence 455455 789999999998852 23667766543221 3578899999998 5444333 2 6
Q ss_pred ccEEEeCCCC
Q 021161 120 ADLVVCDGAP 129 (316)
Q Consensus 120 ~DlVvsDgap 129 (316)
+|.|+...+.
T Consensus 64 ~d~vih~a~~ 73 (313)
T 3ehe_A 64 AEEVWHIAAN 73 (313)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 8999987653
No 493
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=80.72 E-value=1.1 Score=37.59 Aligned_cols=69 Identities=16% Similarity=0.096 Sum_probs=48.8
Q ss_pred CCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCC--EEEEEeCCCCCCCCCcEEEecCccChhhHHHHHhhcCCcc
Q 021161 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLP--LIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCK 119 (316)
Q Consensus 42 ~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~--~IvaVDl~~~~~i~gV~~i~gDIt~~~t~~~I~~~~~~~~ 119 (316)
+++||=.| |+|.....+++.+.. .+. +|++++..+....+++..+.+|+++.+.+. +.+
T Consensus 5 ~~~vlVtG-atG~iG~~l~~~l~~-----------~g~~~~V~~~~r~~~~~~~~~~~~~~D~~~~~~~~---~~~---- 65 (215)
T 2a35_A 5 PKRVLLAG-ATGLTGEHLLDRILS-----------EPTLAKVIAPARKALAEHPRLDNPVGPLAELLPQL---DGS---- 65 (215)
T ss_dssp CCEEEEEC-TTSHHHHHHHHHHHH-----------CTTCCEEECCBSSCCCCCTTEECCBSCHHHHGGGC---CSC----
T ss_pred CceEEEEC-CCcHHHHHHHHHHHh-----------CCCCCeEEEEeCCCcccCCCceEEeccccCHHHHH---Hhh----
Confidence 46788777 578888888887741 123 899998887654567888999999865422 122
Q ss_pred ccEEEeCCCC
Q 021161 120 ADLVVCDGAP 129 (316)
Q Consensus 120 ~DlVvsDgap 129 (316)
+|.|+...+.
T Consensus 66 ~d~vi~~a~~ 75 (215)
T 2a35_A 66 IDTAFCCLGT 75 (215)
T ss_dssp CSEEEECCCC
T ss_pred hcEEEECeee
Confidence 8999987653
No 494
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=80.64 E-value=5.1 Score=32.10 Aligned_cols=67 Identities=7% Similarity=-0.044 Sum_probs=46.3
Q ss_pred CeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCC------CC--CCCcEEEecCccChhhHHHHHhh
Q 021161 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM------AP--IEGVIQVQGDITNARTAEVVIRH 114 (316)
Q Consensus 43 ~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~------~~--i~gV~~i~gDIt~~~t~~~I~~~ 114 (316)
.+|+=+|+ |...+.+++.+.. .+..|+.+|..+. .. ..|+.++.||.++..++..
T Consensus 4 ~~vlI~G~--G~vG~~la~~L~~-----------~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~---- 66 (153)
T 1id1_A 4 DHFIVCGH--SILAINTILQLNQ-----------RGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKK---- 66 (153)
T ss_dssp SCEEEECC--SHHHHHHHHHHHH-----------TTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHH----
T ss_pred CcEEEECC--CHHHHHHHHHHHH-----------CCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHH----
Confidence 45665654 8888999888741 2467999998741 11 2478999999999876543
Q ss_pred cCCccccEEEeC
Q 021161 115 FDGCKADLVVCD 126 (316)
Q Consensus 115 ~~~~~~DlVvsD 126 (316)
..-..+|+|++-
T Consensus 67 a~i~~ad~vi~~ 78 (153)
T 1id1_A 67 AGIDRCRAILAL 78 (153)
T ss_dssp HTTTTCSEEEEC
T ss_pred cChhhCCEEEEe
Confidence 223579999974
No 495
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=80.55 E-value=5 Score=35.78 Aligned_cols=72 Identities=11% Similarity=0.181 Sum_probs=51.2
Q ss_pred CeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCC------CCCCCcEEEecCccChhhHHHHH----
Q 021161 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM------APIEGVIQVQGDITNARTAEVVI---- 112 (316)
Q Consensus 43 ~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~------~~i~gV~~i~gDIt~~~t~~~I~---- 112 (316)
++||=-|++ +|.-..+++++.. .+++|+.+|+++. ....++..+++|+++....+.+.
T Consensus 3 K~vlVTGas-~GIG~aia~~la~-----------~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~ 70 (247)
T 3ged_A 3 RGVIVTGGG-HGIGKQICLDFLE-----------AGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAM 70 (247)
T ss_dssp CEEEEESTT-SHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHH
T ss_pred CEEEEecCC-CHHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHH
Confidence 355555555 5577778877742 3579999999863 23567888999999988766544
Q ss_pred hhcCCccccEEEeCCC
Q 021161 113 RHFDGCKADLVVCDGA 128 (316)
Q Consensus 113 ~~~~~~~~DlVvsDga 128 (316)
+.| ++.|++|.+.+
T Consensus 71 ~~~--g~iDiLVNNAG 84 (247)
T 3ged_A 71 EKL--QRIDVLVNNAC 84 (247)
T ss_dssp HHH--SCCCEEEECCC
T ss_pred HHc--CCCCEEEECCC
Confidence 345 47999999864
No 496
>1vpt_A VP39; RNA CAP, poly(A) polymerase, methyltransferase; HET: SAM; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1vp3_A*
Probab=80.31 E-value=39 Score=31.70 Aligned_cols=110 Identities=16% Similarity=0.146 Sum_probs=66.2
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----CCCCcEEEecCccChhhHHHHHhhcC
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNARTAEVVIRHFD 116 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----~i~gV~~i~gDIt~~~t~~~I~~~~~ 116 (316)
+|..||=.|+|||.+..+|++.... -+...+.+.+|-.+.. .+++|+.++ +.++...++.+.+.+.
T Consensus 75 ~g~~VVYaGsAPG~HI~fL~~lF~~---------l~~~lkwvLiDp~~f~~~Le~~~ni~li~-~ffde~~i~~l~~~~~ 144 (348)
T 1vpt_A 75 DGATVVYIGSAPGTHIRYLRDHFYN---------LGVIIKWMLIDGRHHDPILNGLRDVTLVT-RFVDEEYLRSIKKQLH 144 (348)
T ss_dssp TTCEEEEESCSSCHHHHHHHHHHHH---------TTCCCEEEEEESSCCCGGGTTCTTEEEEE-CCCCHHHHHHHHHHHT
T ss_pred CCCeEEEeCcCCcchHHHHHHHhhh---------cCCceEEEEECCCchhhhhcCCCcEEeeh-hhcCHHHHHHHHHHhc
Confidence 3579999999999999999986531 0134799999998863 456777666 4666666666666665
Q ss_pred CccccEEEeCCCC-CCCCCCCccHHHHHHHHHHHHHHHHHcccCCcEEE
Q 021161 117 GCKADLVVCDGAP-DVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFI 164 (316)
Q Consensus 117 ~~~~DlVvsDgap-dvtG~~~~de~~~~~L~~aaL~~a~~vLkpGG~fV 164 (316)
+. -=+.|||... +..+ ...++.++.. .++-+....+|+|--.++
T Consensus 145 ~~-~vLfISDIRS~~~~~-Ep~~~dll~D--y~lQn~w~~iLkP~aSmL 189 (348)
T 1vpt_A 145 PS-KIILISDVASAAGGN-EPSTADLLSN--YALQNVMISILNPVASSL 189 (348)
T ss_dssp TS-CEEEEECCCC-------CCHHHHHHH--HHHHHHHHHHHCCSEEEE
T ss_pred CC-CEEEEEecccCCCCC-CccHHHHHHH--HHHHHHHHHHhhhHHHhc
Confidence 43 3356788632 1111 1111222111 223345567888875544
No 497
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=80.31 E-value=7.3 Score=33.28 Aligned_cols=76 Identities=16% Similarity=0.100 Sum_probs=48.7
Q ss_pred CCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEE-eCCCCC----------CCCCcEEEecCccChhhHHH
Q 021161 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAI-DLQPMA----------PIEGVIQVQGDITNARTAEV 110 (316)
Q Consensus 42 ~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaV-Dl~~~~----------~i~gV~~i~gDIt~~~t~~~ 110 (316)
+++||=.| |.|+.-..+++++.. .+.+|+.+ +..+.. .-..+.++++|+++...++.
T Consensus 5 ~~~vlItG-asggiG~~~a~~l~~-----------~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 72 (247)
T 2hq1_A 5 GKTAIVTG-SSRGLGKAIAWKLGN-----------MGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVEN 72 (247)
T ss_dssp TCEEEESS-CSSHHHHHHHHHHHH-----------TTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHH
T ss_pred CcEEEEEC-CCchHHHHHHHHHHH-----------CCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence 45666555 558888888888742 24688888 444321 01357889999999876665
Q ss_pred HHhhcC--CccccEEEeCCCC
Q 021161 111 VIRHFD--GCKADLVVCDGAP 129 (316)
Q Consensus 111 I~~~~~--~~~~DlVvsDgap 129 (316)
+.+... .+.+|+|+.+.+.
T Consensus 73 ~~~~~~~~~~~~d~vi~~Ag~ 93 (247)
T 2hq1_A 73 MVKTAMDAFGRIDILVNNAGI 93 (247)
T ss_dssp HHHHHHHHHSCCCEEEECC--
T ss_pred HHHHHHHhcCCCCEEEECCCC
Confidence 443221 1369999998653
No 498
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=80.20 E-value=7.2 Score=36.26 Aligned_cols=91 Identities=11% Similarity=0.088 Sum_probs=55.6
Q ss_pred CCCCeEEEECCC--CCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----CCCCcE-EEecCccChhhHHHHH
Q 021161 40 EGVKRVVDLCAA--PGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVI-QVQGDITNARTAEVVI 112 (316)
Q Consensus 40 ~~~~rVLDLcag--PG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----~i~gV~-~i~gDIt~~~t~~~I~ 112 (316)
+++.+||=+|++ -|.....+++..+ ++|+++. ++.. .--|.. ++ |..+....+.+.
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~G--------------a~Vi~~~-~~~~~~~~~~lGa~~vi--~~~~~~~~~~v~ 225 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSG--------------YIPIATC-SPHNFDLAKSRGAEEVF--DYRAPNLAQTIR 225 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTT--------------CEEEEEE-CGGGHHHHHHTTCSEEE--ETTSTTHHHHHH
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCC--------------CEEEEEe-CHHHHHHHHHcCCcEEE--ECCCchHHHHHH
Confidence 788999999983 4666656666553 6888885 4421 011332 22 333444455566
Q ss_pred hhcCCccccEEEeCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcc-cCCcEEEE
Q 021161 113 RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVL-KEGGKFIA 165 (316)
Q Consensus 113 ~~~~~~~~DlVvsDgapdvtG~~~~de~~~~~L~~aaL~~a~~vL-kpGG~fV~ 165 (316)
+..++ .+|+|+- ++|. ...+..+..+| ++||+++.
T Consensus 226 ~~t~g-~~d~v~d-----~~g~------------~~~~~~~~~~l~~~~G~iv~ 261 (371)
T 3gqv_A 226 TYTKN-NLRYALD-----CITN------------VESTTFCFAAIGRAGGHYVS 261 (371)
T ss_dssp HHTTT-CCCEEEE-----SSCS------------HHHHHHHHHHSCTTCEEEEE
T ss_pred HHccC-CccEEEE-----CCCc------------hHHHHHHHHHhhcCCCEEEE
Confidence 55554 4999983 4442 13356678888 69999986
No 499
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=80.11 E-value=5.6 Score=35.53 Aligned_cols=71 Identities=18% Similarity=0.142 Sum_probs=50.3
Q ss_pred eEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC---CC-CCcEEEecCccChhhHHHHHhhcCCcc
Q 021161 44 RVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---PI-EGVIQVQGDITNARTAEVVIRHFDGCK 119 (316)
Q Consensus 44 rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~---~i-~gV~~i~gDIt~~~t~~~I~~~~~~~~ 119 (316)
+||=.| |+|.....+++.+.. .+.+|++++..... .+ .++.++++|+++...+..+.+. ..
T Consensus 3 ~ilVtG-atG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~---~~ 67 (330)
T 2c20_A 3 SILICG-GAGYIGSHAVKKLVD-----------EGLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDVFTQ---EN 67 (330)
T ss_dssp EEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEEECCSSCCGGGSCTTSEEEECCTTCHHHHHHHHHH---SC
T ss_pred EEEEEC-CCcHHHHHHHHHHHh-----------CCCEEEEEeCCCcCchhhcCCCcEEEECCCCCHHHHHHHHhh---cC
Confidence 566555 579999999888741 24689999876532 12 2788999999998776655443 36
Q ss_pred ccEEEeCCCC
Q 021161 120 ADLVVCDGAP 129 (316)
Q Consensus 120 ~DlVvsDgap 129 (316)
+|.|+...+.
T Consensus 68 ~d~vih~a~~ 77 (330)
T 2c20_A 68 IEAVMHFAAD 77 (330)
T ss_dssp EEEEEECCCC
T ss_pred CCEEEECCcc
Confidence 9999987654
No 500
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=80.09 E-value=18 Score=32.10 Aligned_cols=77 Identities=13% Similarity=0.061 Sum_probs=51.9
Q ss_pred CCCeEEEECCCCCHHHHHHHHHhCCCCCCCCCCCCCCCCEEEEEeCCCCC----------CCCCcEEEecCccChhhHHH
Q 021161 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTAEV 110 (316)
Q Consensus 41 ~~~rVLDLcagPG~wSq~La~~l~~~~~~~~~~~~~~~~~IvaVDl~~~~----------~i~gV~~i~gDIt~~~t~~~ 110 (316)
.+++||=.|++ |++-..+++++.. .+.+|+.+|.++.. .-..+.++++|+++...++.
T Consensus 27 ~~k~~lVTGas-~GIG~aia~~la~-----------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~ 94 (283)
T 3v8b_A 27 PSPVALITGAG-SGIGRATALALAA-----------DGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRN 94 (283)
T ss_dssp CCCEEEEESCS-SHHHHHHHHHHHH-----------TTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHH
Confidence 35677777754 6678888887742 35789999987531 12357889999999876555
Q ss_pred HHhhcC--CccccEEEeCCCC
Q 021161 111 VIRHFD--GCKADLVVCDGAP 129 (316)
Q Consensus 111 I~~~~~--~~~~DlVvsDgap 129 (316)
+.+... .+++|+||.+.+.
T Consensus 95 ~~~~~~~~~g~iD~lVnnAg~ 115 (283)
T 3v8b_A 95 AVRDLVLKFGHLDIVVANAGI 115 (283)
T ss_dssp HHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHhCCCCEEEECCCC
Confidence 443221 1379999998653
Done!