Citrus Sinensis ID: 021161

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310------
MGKASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVCENYFPPEGFNPKDLHRLLEKVGSPWGGEDQDCSSGWLEGPNKVYIPFLACGDLNGYDSDRSYPLPKVADGTYQSLDPVQPPIAPPYKRALEMKKASSQGIREPEKHSLDS
ccccccccccHHHHHHHHHcccHHHHHHHHHHHHHccccccccEEEEcccccccHHHHHHHHcccccccccccccccccEEEEEEccccccccccEEEEcccccHHHHHHHHHHHccccccEEEcccccccccccccHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEcccHHHHHHHHHcccccEEEEccccccccccEEEEEccccccccccccccccHHHHHcccccccccccccccccccccEEEEcccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccccccccccccc
******D*RDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPA*******EGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVCENYFPPEGFNPKDLHRLLEKVGSPWGGEDQDCSSGWLEGPNKVYIPFLACGDLNGYDSDRSYPLPKVADGTYQSLDPVQPPIAPPYKRA*********************
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MGKASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVCENYFPPEGFNPKDLHRLLEKVGSPWGGEDQDCSSGWLEGPNKVYIPFLACGDLNGYDSDRSYPLPKVADGTYQSLDPVQPPIAPPYKRALEMKKASSQGIREPEKHSLDS

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop.probableP38238
Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase probableO36015
Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase Probable methyltransferase.probableQ54VA8

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
2.-.-.-Transferases.probable
2.1.-.-Transferring one-carbon groups.probable
2.1.1.-15-hydroxyprostaglandin-I dehydrogenase (NADP(+)).probable
2.1.1.16623S rRNA (uridine(2552)-2'-O)-methyltransferase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2NYU, chain A
Confidence level:very confident
Coverage over the Query: 20-211
View the alignment between query and template
View the model in PyMOL