Query 021163
Match_columns 316
No_of_seqs 187 out of 1691
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 13:40:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021163.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021163hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3nwy_A Uridylate kinase; allos 100.0 3E-42 1E-46 323.3 22.0 216 87-304 47-280 (281)
2 3ek6_A Uridylate kinase; UMPK 100.0 4.2E-42 1.4E-46 315.9 21.1 216 89-305 8-241 (243)
3 1ybd_A Uridylate kinase; alpha 100.0 1.8E-41 6.1E-46 309.2 24.5 216 89-305 6-239 (239)
4 2a1f_A Uridylate kinase; PYRH, 100.0 2.4E-41 8.2E-46 310.6 21.1 217 89-306 7-241 (247)
5 4a7w_A Uridylate kinase; trans 100.0 6.7E-41 2.3E-45 307.3 22.0 215 89-304 6-240 (240)
6 1z9d_A Uridylate kinase, UK, U 100.0 9.9E-41 3.4E-45 307.6 22.2 218 89-307 6-242 (252)
7 2va1_A Uridylate kinase; UMPK, 100.0 9E-41 3.1E-45 308.8 20.8 216 88-304 22-255 (256)
8 2jjx_A Uridylate kinase, UMP k 100.0 6.9E-39 2.4E-43 295.9 22.3 218 89-307 11-248 (255)
9 2j4j_A Uridylate kinase; trans 100.0 9.7E-38 3.3E-42 282.7 16.3 201 91-305 1-225 (226)
10 2brx_A Uridylate kinase; UMP k 100.0 6.2E-37 2.1E-41 281.2 16.8 207 85-305 14-244 (244)
11 2ij9_A Uridylate kinase; struc 100.0 7E-35 2.4E-39 262.5 16.4 198 91-304 1-219 (219)
12 2j5v_A Glutamate 5-kinase; pro 100.0 5.3E-34 1.8E-38 276.4 21.0 220 89-314 3-266 (367)
13 3ll9_A Isopentenyl phosphate k 100.0 6.7E-34 2.3E-38 264.8 15.6 212 90-304 2-266 (269)
14 3ll5_A Gamma-glutamyl kinase r 100.0 3.1E-33 1.1E-37 257.5 12.7 210 89-304 2-249 (249)
15 2ogx_A Molybdenum storage prot 100.0 8.5E-32 2.9E-36 251.5 22.0 205 92-307 41-273 (276)
16 2ako_A Glutamate 5-kinase; str 100.0 2.3E-32 8E-37 251.0 17.2 207 90-304 1-251 (251)
17 2ap9_A NAG kinase, acetylgluta 100.0 6.4E-32 2.2E-36 254.6 16.0 215 89-307 24-292 (299)
18 2rd5_A Acetylglutamate kinase- 100.0 7.9E-32 2.7E-36 254.0 15.9 213 89-305 35-298 (298)
19 2ogx_B Molybdenum storage prot 100.0 7.8E-31 2.7E-35 244.1 20.8 204 91-305 37-269 (270)
20 2v5h_A Acetylglutamate kinase; 100.0 2.5E-31 8.7E-36 253.3 14.2 216 88-307 47-312 (321)
21 3ab4_A Aspartokinase; aspartat 100.0 5.9E-30 2E-34 251.8 18.5 207 90-306 1-244 (421)
22 3l76_A Aspartokinase; alloster 100.0 4.3E-30 1.5E-34 263.0 16.7 209 90-308 1-247 (600)
23 2bty_A Acetylglutamate kinase; 100.0 5.8E-30 2E-34 239.1 14.2 210 89-306 20-280 (282)
24 3d40_A FOMA protein; fosfomyci 100.0 1.7E-30 5.8E-35 243.8 10.0 211 90-306 23-283 (286)
25 3k4o_A Isopentenyl phosphate k 100.0 3.4E-30 1.2E-34 239.6 11.0 203 91-306 7-265 (266)
26 2buf_A Acetylglutamate kinase; 100.0 4E-29 1.4E-33 235.8 16.9 212 89-307 25-298 (300)
27 2egx_A Putative acetylglutamat 100.0 3.9E-29 1.3E-33 232.3 15.9 207 92-304 1-269 (269)
28 1gs5_A Acetylglutamate kinase; 100.0 1.6E-29 5.6E-34 233.1 12.6 207 90-304 2-257 (258)
29 2cdq_A Aspartokinase; aspartat 100.0 5.5E-28 1.9E-32 243.1 19.0 163 136-307 136-325 (510)
30 2j0w_A Lysine-sensitive aspart 99.9 1.2E-27 4E-32 237.4 16.0 161 137-307 108-293 (449)
31 3l86_A Acetylglutamate kinase; 99.9 1.6E-27 5.4E-32 223.2 15.0 202 83-305 30-278 (279)
32 2e9y_A Carbamate kinase; trans 99.9 7.9E-28 2.7E-32 228.6 12.2 210 89-305 3-315 (316)
33 2we5_A Carbamate kinase 1; arg 99.9 2.9E-27 9.9E-32 224.0 15.2 210 90-304 2-309 (310)
34 3d2m_A Putative acetylglutamat 99.9 6.2E-27 2.1E-31 231.5 15.1 210 89-308 42-306 (456)
35 3tvi_A Aspartokinase; structur 99.9 1.6E-26 5.4E-31 229.0 16.0 155 139-307 108-280 (446)
36 1e19_A Carbamate kinase-like c 99.9 1.4E-26 4.9E-31 219.9 14.5 209 90-305 2-314 (314)
37 3zzh_A Acetylglutamate kinase; 99.9 3.3E-26 1.1E-30 216.8 13.6 209 89-307 47-303 (307)
38 3c1m_A Probable aspartokinase; 99.9 5.8E-25 2E-29 219.4 17.5 165 134-307 116-302 (473)
39 4ab7_A Protein Arg5,6, mitocho 99.9 9.1E-25 3.1E-29 217.0 13.7 208 90-306 48-302 (464)
40 3s6g_A N-acetylglutamate kinas 99.9 4.2E-25 1.4E-29 219.4 10.0 211 89-307 57-312 (460)
41 4axs_A Carbamate kinase; oxido 99.9 1E-23 3.5E-28 201.6 18.1 114 186-305 196-332 (332)
42 3kzf_A Carbamate kinase; argin 99.9 3.1E-23 1.1E-27 196.3 14.4 210 89-306 4-317 (317)
43 3s6k_A Acetylglutamate kinase; 99.9 1.9E-24 6.3E-29 215.1 0.9 211 89-307 60-315 (467)
44 1k1e_A Deoxy-D-mannose-octulos 61.8 7.4 0.00025 32.0 4.1 60 226-295 10-70 (180)
45 3ewi_A N-acylneuraminate cytid 61.7 11 0.00038 31.3 5.2 58 226-295 11-69 (168)
46 2p9j_A Hypothetical protein AQ 56.5 11 0.00037 30.0 4.2 60 226-295 11-71 (162)
47 3pgv_A Haloacid dehalogenase-l 38.0 49 0.0017 28.8 5.7 29 266-294 44-72 (285)
48 3f9r_A Phosphomannomutase; try 36.4 60 0.002 28.1 6.0 51 226-295 6-56 (246)
49 2r8e_A 3-deoxy-D-manno-octulos 35.7 38 0.0013 27.8 4.4 58 227-294 29-87 (188)
50 3kbq_A Protein TA0487; structu 35.7 1.1E+02 0.0038 25.7 7.3 68 151-223 24-91 (172)
51 3fzq_A Putative hydrolase; YP_ 34.5 77 0.0026 26.9 6.4 51 226-295 7-57 (274)
52 2pq0_A Hypothetical conserved 32.7 65 0.0022 27.4 5.6 27 267-293 27-53 (258)
53 1rkq_A Hypothetical protein YI 32.2 41 0.0014 29.5 4.2 51 226-295 7-57 (282)
54 4dw8_A Haloacid dehalogenase-l 29.5 84 0.0029 26.9 5.8 30 266-295 28-57 (279)
55 2fue_A PMM 1, PMMH-22, phospho 28.5 67 0.0023 27.7 5.0 52 224-295 13-64 (262)
56 3dnp_A Stress response protein 26.6 77 0.0026 27.3 5.0 30 266-295 29-58 (290)
57 2amy_A PMM 2, phosphomannomuta 26.5 77 0.0026 26.9 4.9 51 225-295 7-57 (246)
58 1u02_A Trehalose-6-phosphate p 26.0 58 0.002 27.8 4.0 29 266-295 29-57 (239)
59 3n1u_A Hydrolase, HAD superfam 25.8 1.4E+02 0.0048 24.5 6.3 28 268-295 54-81 (191)
60 1xvi_A MPGP, YEDP, putative ma 25.6 97 0.0033 26.9 5.5 30 266-295 32-61 (275)
61 3e8m_A Acylneuraminate cytidyl 24.7 79 0.0027 24.8 4.3 59 227-295 7-66 (164)
62 3mn1_A Probable YRBI family ph 23.8 84 0.0029 25.7 4.5 28 268-295 54-81 (189)
63 3mmz_A Putative HAD family hyd 23.5 1.4E+02 0.0049 24.0 5.8 60 226-295 14-74 (176)
64 3n07_A 3-deoxy-D-manno-octulos 22.9 1.2E+02 0.004 25.4 5.3 31 265-295 57-87 (195)
65 2b30_A Pvivax hypothetical pro 21.9 1E+02 0.0035 27.4 4.9 51 226-294 29-79 (301)
No 1
>3nwy_A Uridylate kinase; allosterically activated form, AAK fold, UMP kinase, transfe; HET: GTP UDP; 2.54A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3e-42 Score=323.27 Aligned_cols=216 Identities=53% Similarity=0.884 Sum_probs=188.2
Q ss_pred CCCCCeEEEEECccccccCCCCCCC------------------CCeEEEEChhHHHHHHHHcccCCCCccHHHHHHHHHH
Q 021163 87 SYKWQRVLLKVSGEALAGDHTQNID------------------PKVAIVVGGGNIFRGASAAGNSGLDRSSADYIGMLAT 148 (316)
Q Consensus 87 ~~~~k~iVIKiGGS~i~~~~~~~~~------------------~~vVIVhGGG~~a~G~~~l~~~gl~~~~~d~v~~la~ 148 (316)
..++|+||||+||+++++++ ..++ .++|||||||++++|+... ..+++....|+++++++
T Consensus 47 ~~~~krIViKlGGs~L~~~~-~~ld~~~i~~la~~I~~l~~~G~~vviV~GgG~i~~g~~~~-~~gl~~~~~d~~g~lat 124 (281)
T 3nwy_A 47 LSGYSRVLLKLGGEMFGGGQ-VGLDPDVVAQVARQIADVVRGGVQIAVVIGGGNFFRGAQLQ-QLGMERTRSDYMGMLGT 124 (281)
T ss_dssp CCCCSEEEEEECGGGGGTTS-SSCCHHHHHHHHHHHHHHHHTTCEEEEEECCTTC---CCTT-TTTCCHHHHHHHHHHHH
T ss_pred CCcCcEEEEEEchhhccCCC-CCCCHHHHHHHHHHHHHHHHCCCeEEEEECChhHhhhHHHH-hcCCCccchhHHHHHHH
Confidence 34789999999999999864 2222 3689999999999888533 25788888899999999
Q ss_pred HHHHHHHHHHHHhCCCCeEEEeccccccccchHHHHHHHHHHhCCCEEEEeCCCCCCCCCchHHHHHHHHhcCCcEEEEe
Q 021163 149 VMNAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKA 228 (316)
Q Consensus 149 ~lna~Lv~~~L~~~Gi~a~~l~~~~~~~~~~~~i~~~l~~lL~~g~IPVv~g~~g~~~~~sD~iAa~LA~~L~Ad~Liil 228 (316)
++|+.+++.+|+++|++++.|++++..++.++|++.+..++|++|.|||++++.|+++++||++|+++|.+|+||+|+++
T Consensus 125 ~~n~~~l~~~L~~~Gi~a~~~~~~~~~~~~~~~~~~~~l~lL~~g~IpVv~g~~g~~~~~~D~~Aa~lA~~l~Ad~Liil 204 (281)
T 3nwy_A 125 VMNSLALQDFLEKEGIVTRVQTAITMGQVAEPYLPLRAVRHLEKGRVVIFGAGMGLPYFSTDTTAAQRALEIGADVVLMA 204 (281)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEESSCCGGGSEECCHHHHHHHHHTTCEEEEESTTSSTTCCHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEecccccccccccchHHHHHHHHcCCeEEEECCCCCCCCCHHHHHHHHHHHcCCCEEEEe
Confidence 99999998999999999988999999888888877666689999999999998889999999999999999999999999
Q ss_pred cccCcccccCCCCCCCCceeccccHHHHhhCCCCCchHHHHHHHHhCCCcEEEEeCCCcchHHHHhcCCCcceEEe
Q 021163 229 TNVDGVYDDNPRRNPNARLLDTLTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQGERVGTLIG 304 (316)
Q Consensus 229 TDVdGVyt~dP~~~p~aklI~~It~~e~~~lG~~v~k~~Aa~~a~~~gI~v~I~ng~~p~~i~~~l~G~~~GT~I~ 304 (316)
|||||||++||+.+|++++|+++++.|+.+.|.+++|++|++.|.++|++++|+|+++|++|.++++|+.+||+|.
T Consensus 205 TDVdGVy~~dP~~~p~A~~i~~is~~e~~~~g~~v~k~~Aa~~a~~~Gi~v~I~~g~~p~~l~~~l~Ge~~GT~i~ 280 (281)
T 3nwy_A 205 KAVDGVFAEDPRVNPEAELLTAVSHREVLDRGLRVADATAFSLCMDNGMPILVFNLLTDGNIARAVRGEKIGTLVT 280 (281)
T ss_dssp ESSSSCBCC-----CCCCBCSEECHHHHHTTTCCSSCHHHHHHHHTTTCCEEEEETTSTTHHHHHHHTCCCSEEEC
T ss_pred eccCccccCCCCcCCCCeEcccccHHHHHHcCCCcHHHHHHHHHHHCCCeEEEecCCCchHHHHHHcCCCCceEEe
Confidence 9999999999999999999999999998877889999999999999999999999999999999999999999985
No 2
>3ek6_A Uridylate kinase; UMPK unique GTP B site, allosteric regulation, ATP-binding, nucleotid binding, pyrimidine biosynthesis, transferase; 2.34A {Xanthomonas campestris PV} SCOP: c.73.1.0 PDB: 3ek5_A
Probab=100.00 E-value=4.2e-42 Score=315.93 Aligned_cols=216 Identities=52% Similarity=0.921 Sum_probs=190.9
Q ss_pred CCCeEEEEECccccccCCCCCCC------------------CCeEEEEChhHHHHHHHHcccCCCCccHHHHHHHHHHHH
Q 021163 89 KWQRVLLKVSGEALAGDHTQNID------------------PKVAIVVGGGNIFRGASAAGNSGLDRSSADYIGMLATVM 150 (316)
Q Consensus 89 ~~k~iVIKiGGS~i~~~~~~~~~------------------~~vVIVhGGG~~a~G~~~l~~~gl~~~~~d~v~~la~~l 150 (316)
++|++|||+||+++++++...++ .++|||||||++++++. +.+.|++....|+++++++++
T Consensus 8 ~~~riViKlGGs~l~~~~~~~~~~~~i~~la~~i~~l~~~G~~vviV~gGG~~~~~~~-~~~~g~~~~~~d~~g~l~t~~ 86 (243)
T 3ek6_A 8 SYRRILLKLSGEALMGDGDYGIDPKVINRLAHEVIEAQQAGAQVALVIGGGNIFRGAG-LAASGMDRVTGDHMGMLATVI 86 (243)
T ss_dssp SCSEEEEEECGGGGTTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEECSTTTSCSTT-TSCSSSCHHHHHHHHHHHHHH
T ss_pred cCcEEEEEEchhhccCCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEECCCHHHHHHH-HHHcCCCCCCHHHHHHHHHHH
Confidence 57899999999999987532232 36799999999866653 334678877888899999999
Q ss_pred HHHHHHHHHHhCCCCeEEEeccccccccchHHHHHHHHHHhCCCEEEEeCCCCCCCCCchHHHHHHHHhcCCcEEEEecc
Q 021163 151 NAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATN 230 (316)
Q Consensus 151 na~Lv~~~L~~~Gi~a~~l~~~~~~~~~~~~i~~~l~~lL~~g~IPVv~g~~g~~~~~sD~iAa~LA~~L~Ad~LiilTD 230 (316)
|+.++.++|++.|+++..+++++...+.+++..+.+..+|++|.|||++|+.|.+++++|++|+++|.+|+||+|+++||
T Consensus 87 N~~~l~~al~~~G~~a~~~~~~~~~~v~~~~~~~~~~~lL~~g~IpVv~~~~g~~~~~~D~~Aa~lA~~l~Ad~li~lTd 166 (243)
T 3ek6_A 87 NALAMQDALEKLGAKVRVMSAIKINDVCEDFIRRRAIRHLEKGRIAIFAAGTGNPFFTTDSGAALRAIEIGADLLLKATK 166 (243)
T ss_dssp HHHHHHHHHHHTTCCEEEEESSCBTTTBEECCHHHHHHHHHTTCEEEEESTTSSTTCCHHHHHHHHHHHHTCSEEEEECS
T ss_pred HHHHHHHHHHHcCCCeEEechhhcCcccCcCCHHHHHHHHHCCcEEEEECCCCCCcCChHHHHHHHHHHcCCCEEEEEeC
Confidence 99988889999999999988887655544454456778999999999999888999999999999999999999999999
Q ss_pred cCcccccCCCCCCCCceeccccHHHHhhCCCCCchHHHHHHHHhCCCcEEEEeCCCcchHHHHhcCCCcceEEec
Q 021163 231 VDGVYDDNPRRNPNARLLDTLTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQGERVGTLIGG 305 (316)
Q Consensus 231 VdGVyt~dP~~~p~aklI~~It~~e~~~lG~~v~k~~Aa~~a~~~gI~v~I~ng~~p~~i~~~l~G~~~GT~I~~ 305 (316)
|||||++||+.+|++++|++++++|+.+.|.+++|++|++.|.++|++++|+|+++|++|.++++|+.+||+|.+
T Consensus 167 VdGvy~~dp~~~p~a~~i~~i~~~e~~~~g~~~~~~~a~~~a~~~gv~v~I~~g~~~~~l~~~l~g~~~GT~i~~ 241 (243)
T 3ek6_A 167 VDGVYDKDPKKHSDAVRYDSLTYDEVIMQGLEVMDTAAFALARDSDLPLRIFGMSEPGVLLRILHGAQIGTLVQG 241 (243)
T ss_dssp SSSCBSSCGGGCTTCCBCSEECHHHHHHHTCCSSCHHHHHHHHHTTCCEEEECCCSTTHHHHHHTTCCCSEEECC
T ss_pred CCccCCCCCCCCCCceecccccHHHHHhCCchhHHHHHHHHHHHCCCeEEEEcCCCccHHHHHHCCCCCceEEee
Confidence 999999999999999999999999987778889999999999999999999999999999999999999999986
No 3
>1ybd_A Uridylate kinase; alpha/beta/alpha fold, hexamer, structural genomics, structure initiative, PSI; 2.60A {Neisseria meningitidis} SCOP: c.73.1.3
Probab=100.00 E-value=1.8e-41 Score=309.23 Aligned_cols=216 Identities=55% Similarity=0.901 Sum_probs=190.4
Q ss_pred CCCeEEEEECccccccCCCCCC------------------CCCeEEEEChhHHHHHHHHcccCCCCccHHHHHHHHHHHH
Q 021163 89 KWQRVLLKVSGEALAGDHTQNI------------------DPKVAIVVGGGNIFRGASAAGNSGLDRSSADYIGMLATVM 150 (316)
Q Consensus 89 ~~k~iVIKiGGS~i~~~~~~~~------------------~~~vVIVhGGG~~a~G~~~l~~~gl~~~~~d~v~~la~~l 150 (316)
+++++|||+||++++++....+ ..++|||||||++++|+. +++++++....|+++++++++
T Consensus 6 ~~~~iViK~GGs~l~~~~~~~~~~~~~~~~~~~i~~l~~~g~~vviV~GgG~~~~g~~-~~~~~~~~~~~~~~~~~~~~~ 84 (239)
T 1ybd_A 6 KYKRVLLKLSGESLMGSDPFGINHDTIVQTVGEIAEVVKMGVQVGIVVGGGNIFRGVS-AQAGSMDRATADYMGMMATVM 84 (239)
T ss_dssp SCSEEEEEECGGGGGTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHHHHH-HHHTTSCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEchHHhCCCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEECCcHHHhchh-HHHcCCCCccHHHHHHHHHHH
Confidence 5789999999999997522111 136899999999999975 334568877778889999999
Q ss_pred HHHHHHHHHHhCCCCeEEEeccccccccchHHHHHHHHHHhCCCEEEEeCCCCCCCCCchHHHHHHHHhcCCcEEEEecc
Q 021163 151 NAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATN 230 (316)
Q Consensus 151 na~Lv~~~L~~~Gi~a~~l~~~~~~~~~~~~i~~~l~~lL~~g~IPVv~g~~g~~~~~sD~iAa~LA~~L~Ad~LiilTD 230 (316)
|..++.++|.++|+++.++++.+...+.+.|.+.+..++|+.|.|||++++.|.+++++|++|+++|.+|+||+|+||||
T Consensus 85 ~~~l~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~ipVv~g~~g~~~~~~D~~Aa~lA~~l~Ad~liilTd 164 (239)
T 1ybd_A 85 NALALKDAFETLGIKARVQSALSMQQIAETYARPKAIQYLEEGKVVIFAAGTGNPFFTTDTAAALRGAEMNCDVMLKATN 164 (239)
T ss_dssp HHHHHHHHHHHTTCCEEEEESSCBSSSCEECCHHHHHHHHHTTCEEEEESTTSSTTCCHHHHHHHHHHHTTCSEEEEECS
T ss_pred HHHHHHHHHHHcCCCeEEEeeecccccccchhHHHHHHHHhCCcEEEEECCccCCCCCcHHHHHHHHHhcCCCEEEEeeC
Confidence 99987789999999999899888766655555555557899999999999888899999999999999999999999999
Q ss_pred cCcccccCCCCCCCCceeccccHHHHhhCCCCCchHHHHHHHHhCCCcEEEEeCCCcchHHHHhcCCCcceEEec
Q 021163 231 VDGVYDDNPRRNPNARLLDTLTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQGERVGTLIGG 305 (316)
Q Consensus 231 VdGVyt~dP~~~p~aklI~~It~~e~~~lG~~v~k~~Aa~~a~~~gI~v~I~ng~~p~~i~~~l~G~~~GT~I~~ 305 (316)
|||||++||+.+|++++|++++++|+.++|.++||++|+++|.++|++++|+|+++|+.+.++++|+.+||+|.+
T Consensus 165 VdGvy~~dp~~~p~a~~i~~i~~~e~~~~g~~~m~~~a~~~a~~~gv~v~I~~~~~~~~l~~~l~g~~~GT~i~~ 239 (239)
T 1ybd_A 165 VDGVYTADPKKDPSATRYETITFDEALLKNLKVMDATAFALCRERKLNIVVFGIAKEGSLKRVITGEDEGTLVHC 239 (239)
T ss_dssp SSSCBSSCGGGCTTCCBCSEEEHHHHHHTTCCSSCHHHHHHHHHTTCCEEEECTTSTTHHHHHHHTCSCSEEEEC
T ss_pred CCccCCCCCCCCCCCeEccccCHHHHHHhcccccCHHHHHHHHHcCCcEEEEeCCChhHHHHHHcCCCCCeEEcC
Confidence 999999999999999999999999998888899999999999999999999999999999999999989999964
No 4
>2a1f_A Uridylate kinase; PYRH, structural genomics, PSI, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.10A {Haemophilus influenzae} SCOP: c.73.1.3 PDB: 2bne_A* 2bnf_A* 2v4y_A* 2bnd_A*
Probab=100.00 E-value=2.4e-41 Score=310.65 Aligned_cols=217 Identities=45% Similarity=0.805 Sum_probs=185.3
Q ss_pred CCCeEEEEECccccccCCCCCC------------------CCCeEEEEChhHHHHHHHHcccCCCCccHHHHHHHHHHHH
Q 021163 89 KWQRVLLKVSGEALAGDHTQNI------------------DPKVAIVVGGGNIFRGASAAGNSGLDRSSADYIGMLATVM 150 (316)
Q Consensus 89 ~~k~iVIKiGGS~i~~~~~~~~------------------~~~vVIVhGGG~~a~G~~~l~~~gl~~~~~d~v~~la~~l 150 (316)
+++++|||+||++++++....+ ..++|||||||++++++. +++++++.++.|.++++++++
T Consensus 7 ~~k~iViKlGGs~l~~~~~~~~~~~~i~~~a~~I~~l~~~G~~vVlVhGgG~~~~~~~-~~~~g~~~~~~d~~~~~~~~~ 85 (247)
T 2a1f_A 7 IYKRILLKLSGEALQGEDGLGIDPAILDRMAVEIKELVEMGVEVSVVLGGGNLFRGAK-LAKAGMNRVVGDHMGMLATVM 85 (247)
T ss_dssp SCSEEEEEECGGGGCCTTSSSCCHHHHHHHHHHHHHHHTTTCEEEEEECCTTTCCCHH-HHHTTCCHHHHHHHHHHHHHH
T ss_pred cccEEEEEEChhhhCCCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEECCChHhcchh-HHHcCCCCCcHHHHHHHHHHH
Confidence 5789999999999996421111 136899999999988875 344678888888899999999
Q ss_pred HHHHHHHHHHhCCCCeEEEeccccccccchHHHHHHHHHHhCCCEEEEeCCCCCCCCCchHHHHHHHHhcCCcEEEEecc
Q 021163 151 NAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATN 230 (316)
Q Consensus 151 na~Lv~~~L~~~Gi~a~~l~~~~~~~~~~~~i~~~l~~lL~~g~IPVv~g~~g~~~~~sD~iAa~LA~~L~Ad~LiilTD 230 (316)
|..++.++|.++|+++.++++.+...+.++|++.++.++|+.|.|||++|+.|.+++++|++|+++|.+|+||+|+||||
T Consensus 86 ~~~ll~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~ipVi~~~~g~~~~~~D~~Aa~lA~~l~Ad~liilTD 165 (247)
T 2a1f_A 86 NGLAMRDSLFRADVNAKLMSAFQLNGICDTYNWSEAIKMLREKRVVIFSAGTGNPFFTTDSTACLRGIEIEADVVLKATK 165 (247)
T ss_dssp HHHHHHHHHHHTTCCEEEEESSCCTTTSEECCHHHHHHHHHTTCEEEEESTTSCSSCCHHHHHHHHHHHTTCSEEEEEES
T ss_pred HHHHHHHHHHHcCCCeEEecccccccccchhhHHHHHHHHhCCCEEEEeCCcCCCCCCcHHHHHHHHHhCCCCEEEEEeC
Confidence 99987789999999999899888766655566666778999999999999888899999999999999999999999999
Q ss_pred cCcccccCCCCCCCCceeccccHHHHhhCCCCCchHHHHHHHHhCCCcEEEEeCCCcchHHHHhcCCCcceEEecC
Q 021163 231 VDGVYDDNPRRNPNARLLDTLTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQGERVGTLIGGT 306 (316)
Q Consensus 231 VdGVyt~dP~~~p~aklI~~It~~e~~~lG~~v~k~~Aa~~a~~~gI~v~I~ng~~p~~i~~~l~G~~~GT~I~~~ 306 (316)
|||||++||+.+|++++|++++++|+.++|.++||++|+++|.+.|++++|+|+++|+.+.++++|+.+||+|...
T Consensus 166 VdGvy~~dP~~~p~a~~i~~i~~~e~~~~g~~~m~~~aa~~a~~~gv~v~I~~~~~~~~l~~~l~g~~~GT~~~~~ 241 (247)
T 2a1f_A 166 VDGVYDCDPAKNPDAKLYKNLSYAEVIDKELKVMDLSAFTLARDHGMPIRVFNMGKPGALRQVVTGTEEGTTICEG 241 (247)
T ss_dssp SSSCBCC-------CCBCSEECHHHHHHTTCCSSCHHHHHHHHHHTCCEEEEETTSTTHHHHHHTCSCSSEEECCC
T ss_pred CCcccCCCCCCCCCCeEcccCCHHHHHHcCccccCHHHHHHHHHcCCcEEEEeCCCchHHHHHHcCCCCceEEeec
Confidence 9999999999999999999999999988888899999999999999999999999999999999999999999753
No 5
>4a7w_A Uridylate kinase; transferase; HET: GTP; 1.80A {Helicobacter pylori} PDB: 4a7x_A*
Probab=100.00 E-value=6.7e-41 Score=307.31 Aligned_cols=215 Identities=54% Similarity=0.885 Sum_probs=182.1
Q ss_pred CCCeEEEEECccccccCCCCCCC------------------CCeEEEEChhHHHHHHHHcccCC-CCccHHHHHHHHHHH
Q 021163 89 KWQRVLLKVSGEALAGDHTQNID------------------PKVAIVVGGGNIFRGASAAGNSG-LDRSSADYIGMLATV 149 (316)
Q Consensus 89 ~~k~iVIKiGGS~i~~~~~~~~~------------------~~vVIVhGGG~~a~G~~~l~~~g-l~~~~~d~v~~la~~ 149 (316)
++|++|||+||++++++....++ .++|||||||++++|+... ..| ++....+.+++++++
T Consensus 6 ~~k~iViKiGGs~l~~~~~~~~~~~~i~~~a~~I~~l~~~G~~vvlV~gGG~~~~g~~~~-~~G~~~~~~~~~~~~la~~ 84 (240)
T 4a7w_A 6 KNKRVLVKFSGEALAGDNQFGIDIHVLDHIAKEIKSLVENDIEVGIVIGGGNIIRGVSAA-QGGIIRRTSGDYMGMLATV 84 (240)
T ss_dssp CCCEEEEEECGGGGGTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEECCTTTC----------CCCHHHHHHHHHHHHH
T ss_pred CCCEEEEEECHHHcCCCCCCCCCHHHHHHHHHHHHHHHHCCCcEEEEECCcHHHhHhHHH-hcCCCCCCCHHHHHHHHHH
Confidence 57899999999999974322222 3679999999999887632 357 777777889999999
Q ss_pred HHHHHHHHHHHhCCCCeEEEeccccccccchHHHHHHHHHHhCCCEEEEeCCCCCCCCCchHHHHHHHHhcCCcEEEEec
Q 021163 150 MNAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKAT 229 (316)
Q Consensus 150 lna~Lv~~~L~~~Gi~a~~l~~~~~~~~~~~~i~~~l~~lL~~g~IPVv~g~~g~~~~~sD~iAa~LA~~L~Ad~LiilT 229 (316)
+|+.+++++|+++|++++++++.+.....+++..+.+.++|++|.|||++|+.|.+++++|++|+++|.+|+||+|++||
T Consensus 85 ~n~~l~~~~l~~~G~~av~lt~~d~~~~~~~~~~~~i~~lL~~g~ipVi~~~~g~~~~~~D~~Aa~lA~~l~Ad~li~lT 164 (240)
T 4a7w_A 85 INAVAMQEALEHIGLDTRVQSAIEIKEICESYIYRKAIRHLEKGRVVIFGAGTGNPFFTTDTAATLRAIEIGSDLIIKAT 164 (240)
T ss_dssp HHHHHHHHHHHHTTCCEEEEESSCCTTTSEECCHHHHHHHHHTTCEEEEESTTSCTTSCHHHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHHHHHHHHCCCCEEEecHHHcCcccCcCcHHHHHHHHHCCCEEEEeCCCCCCCCChHHHHHHHHHHcCCCEEEEcc
Confidence 99999988999999999999887765544444334567889999999999988889999999999999999999999999
Q ss_pred ccCcccccCCCCCCCCceeccccHHHHhhCCCCCchHHHHHHHHhCCCcEEEEeCCCcchHHHHhcCC-CcceEEe
Q 021163 230 NVDGVYDDNPRRNPNARLLDTLTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQGE-RVGTLIG 304 (316)
Q Consensus 230 DVdGVyt~dP~~~p~aklI~~It~~e~~~lG~~v~k~~Aa~~a~~~gI~v~I~ng~~p~~i~~~l~G~-~~GT~I~ 304 (316)
||||||++||+.+|++++|++++++|+.+.|.++||++|++.|.++|++++|+|+++|+++.+++.|+ .+||.|.
T Consensus 165 dVdGvy~~dp~~~p~a~~i~~i~~~e~~~~g~~~m~~~a~~~a~~~gv~v~I~~g~~~~~l~~~l~g~~g~GT~i~ 240 (240)
T 4a7w_A 165 KVDGIYDKDPNKFKDAKKLDTLSYNDALIGDIEVMDDTAISLAKDNKLPIVVCNMFKKGNLLQVIKHQQGVFSMVK 240 (240)
T ss_dssp SSSSEESSCTTTCTTCCEESEECHHHHHHSSCCSSCHHHHHHHHHTTCCEEEEESSSTTHHHHHHHHSCSSCEEEC
T ss_pred CCCceECCCCCCCCCCeEcceecHHHHHhcCccccHHHHHHHHHHCCCeEEEECCCCccHHHHHHCCCCCCceeeC
Confidence 99999999999999999999999999988888899999999999999999999999999999998876 5799983
No 6
>1z9d_A Uridylate kinase, UK, UMP kinase; structural genomics, protein structure initiative, NYSGXRC, PYRH, putative uridylate kinase, PSI; 2.80A {Streptococcus pyogenes} SCOP: c.73.1.3
Probab=100.00 E-value=9.9e-41 Score=307.57 Aligned_cols=218 Identities=52% Similarity=0.879 Sum_probs=191.0
Q ss_pred CCCeEEEEECccccccCCCCCC------------------CCCeEEEEChhHHHHHHHHcccCCCCccHHHHHHHHHHHH
Q 021163 89 KWQRVLLKVSGEALAGDHTQNI------------------DPKVAIVVGGGNIFRGASAAGNSGLDRSSADYIGMLATVM 150 (316)
Q Consensus 89 ~~k~iVIKiGGS~i~~~~~~~~------------------~~~vVIVhGGG~~a~G~~~l~~~gl~~~~~d~v~~la~~l 150 (316)
+++++|||+||++++++....+ ..++|||||||++++|+. ++++++++.+.+.++++++.+
T Consensus 6 ~~k~iViKlGGs~l~~~~~~~~~~~~~~~~a~~I~~l~~~G~~vVlVhGgG~~~~g~~-~~~lg~~~~~~~~~~~~~~~~ 84 (252)
T 1z9d_A 6 KYQRILIKLSGEALAGEKGVGIDIPTVQAIAKEIAEVHVSGVQIALVIGGGNLWRGEP-AADAGMDRVQADYTGMLGTVM 84 (252)
T ss_dssp SCSEEEEEECGGGGTCSSSSSCCHHHHHHHHHHHHHHHTTTCEEEEEECCTTTCCHHH-HHHHTCCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEchHHccCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEECCChHhccch-HHHcCCCCCchHHHHHHHHHH
Confidence 5789999999999997421111 136899999999988874 334578888888889999999
Q ss_pred HHHHHHHHHHhCCCCeEEEeccccccccchHHHHHHHHHHhCCCEEEEeCCCCCCCCCchHHHHHHHHhcCCcEEEEec-
Q 021163 151 NAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKAT- 229 (316)
Q Consensus 151 na~Lv~~~L~~~Gi~a~~l~~~~~~~~~~~~i~~~l~~lL~~g~IPVv~g~~g~~~~~sD~iAa~LA~~L~Ad~LiilT- 229 (316)
|..++.++|.++|+++.++++.+..++.++|++.++..+|+.|.|||++|+.|.+++++|++|+++|.+|+|++|+|||
T Consensus 85 ~~~ll~~al~~~G~~~~~~~~~~~~~~~~~~~~~~~~~lL~~g~IpVi~~~~g~~~~~~D~~Aa~lA~~l~Ad~LiilT~ 164 (252)
T 1z9d_A 85 NALVMADSLQHYGVDTRVQTAIPMQNVAEPYIRGRALRHLEKNRIVVFGAGIGSPYFSTDTTAALRAAEIEADAILMAKN 164 (252)
T ss_dssp HHHHHHHHHHTTTCCEEEEESSCBTTTBEECCHHHHHHHHHTTCEEEEESTTSCTTCCHHHHHHHHHHHTTCSEEEEEES
T ss_pred HHHHHHHHHHHcCCCeEEEeccccccccCcchHHHHHHHHhCCCEEEEeCCcCCCCCChHHHHHHHHHhcCCCEEEEecC
Confidence 9997788999999999989888776555556666667899999999999988889999999999999999999999999
Q ss_pred ccCcccccCCCCCCCCceeccccHHHHhhCCCCCchHHHHHHHHhCCCcEEEEeCCCcchHHHHhcCCCcceEEecCC
Q 021163 230 NVDGVYDDNPRRNPNARLLDTLTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQGERVGTLIGGTW 307 (316)
Q Consensus 230 DVdGVyt~dP~~~p~aklI~~It~~e~~~lG~~v~k~~Aa~~a~~~gI~v~I~ng~~p~~i~~~l~G~~~GT~I~~~~ 307 (316)
||||||++||+.+|++++|++|+++|+.+.|.+.||++|++.|.+.|++++|+|+++|+.|.++++|+.+||+|.++.
T Consensus 165 DVdGvy~~dP~~~~~a~~i~~i~~~e~~~~~~~~mk~~aa~~a~~~gv~v~I~~g~~~~~l~~~l~g~~~GT~i~~~~ 242 (252)
T 1z9d_A 165 GVDGVYNADPKKDANAVKFDELTHGEVIKRGLKIMDATASTLSMDNDIDLVVFNMNEAGNIQRVVFGEHIGTTVSNKV 242 (252)
T ss_dssp SCCSCBSSCTTTCTTCCBCSEEEHHHHHTTTCCCSCHHHHHHHHHTTCEEEEEETTSTTHHHHHHTTCCCSEEEECC-
T ss_pred CCCeeeCCCCCCCCCCeEeeEecHHHHHhccccccCHHHHHHHHHcCCeEEEEeCCCchHHHHHHcCCCCceEEecCC
Confidence 999999999999999999999999999888888899999999999999999999999999999999998999998754
No 7
>2va1_A Uridylate kinase; UMPK, transferase, pyrimidine biosynthesis, amino acid kinase family; 2.50A {Ureaplasma parvum}
Probab=100.00 E-value=9e-41 Score=308.82 Aligned_cols=216 Identities=38% Similarity=0.687 Sum_probs=183.3
Q ss_pred CCCCeEEEEECccccccCCCCCC-----------------CCCeEEEEChhHHHHHHHHcccCCCCccHHHHHHHHHHHH
Q 021163 88 YKWQRVLLKVSGEALAGDHTQNI-----------------DPKVAIVVGGGNIFRGASAAGNSGLDRSSADYIGMLATVM 150 (316)
Q Consensus 88 ~~~k~iVIKiGGS~i~~~~~~~~-----------------~~~vVIVhGGG~~a~G~~~l~~~gl~~~~~d~v~~la~~l 150 (316)
+++|++|||+||++++++....+ ..++|||||||++++++. +++++++..+.+.++++++.+
T Consensus 22 ~~~k~iVIKiGGs~l~~~~~~~~~~~~i~~~a~~i~~l~~g~~vVlVhGgG~~~~~~~-~~~~g~~~~~~~~~~~l~~~~ 100 (256)
T 2va1_A 22 MRKQRIVIKISGACLKQNDSSIIDFIKINDLAEQIEKISKKYIVSIVLGGGNIWRGSI-AKELDMDRNLADNMGMMATII 100 (256)
T ss_dssp -CCSEEEEEECGGGGCSSTTCSSCHHHHHHHHHHHHHHTTTSEEEEEECCTTTCCHHH-HHHTTCCHHHHHHHHHHHHHH
T ss_pred hhcCEEEEEechhhccCCCCCCCCHHHHHHHHHHHHHHhCCCEEEEEECCcHHhccch-HHHcCCCCCchhHHHHHHHHH
Confidence 46789999999999997631111 236899999999988875 444678887778889999999
Q ss_pred HHHHHHHHHHhCCCCeEEEeccccccccchHHHHHHHHHHhCCCEEEEeCCCCCCCCCchHHHHHHHHhcCCcEEEEecc
Q 021163 151 NAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATN 230 (316)
Q Consensus 151 na~Lv~~~L~~~Gi~a~~l~~~~~~~~~~~~i~~~l~~lL~~g~IPVv~g~~g~~~~~sD~iAa~LA~~L~Ad~LiilTD 230 (316)
|..++.++|.++|+++..+++++...+.++|++.++..+|+.|.|||++|++|.+++++|++|+++|.+|+||+|+++||
T Consensus 101 n~~l~~~~l~~~Gi~a~~~~~~t~~~~~~~~~~~~~~~lL~~g~IpVi~~~~g~~~~~~D~~Aa~lA~~l~Ad~LiilTD 180 (256)
T 2va1_A 101 NGLALENALNHLNVNTIVLSAIKCDKLVHESSANNIKKAIEKEQVMIFVAGTGFPYFTTDSCAAIRAAETESSIILMGKN 180 (256)
T ss_dssp HHHHHHHHHHTTTCCEEEEESSCCTTTCEECCHHHHHHHHHTTCEEEEESTTSSSSCCHHHHHHHHHHHHTCSEEEEEES
T ss_pred HHHHHHHHHHHcCCCeEEEeeeecccccchhhHHHHHHHHhCCcEEEEECCCCCCCCChhHHHHHHHHhCCCCEEEEeec
Confidence 99997789999999999899988877776777666678999999999999888999999999999999999999999999
Q ss_pred -cCcccccCCCCCCCCceeccccHHHHhhCCCCCchHHHHHHHHhCCCcEEEEeCCCcchHHHHhcCCCcceEEe
Q 021163 231 -VDGVYDDNPRRNPNARLLDTLTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQGERVGTLIG 304 (316)
Q Consensus 231 -VdGVyt~dP~~~p~aklI~~It~~e~~~lG~~v~k~~Aa~~a~~~gI~v~I~ng~~p~~i~~~l~G~~~GT~I~ 304 (316)
|||||++||+.+|++++|++|+++|+.+++.+.||++|++.|.++|++++|+|+++|+++.++++|+.+||+|.
T Consensus 181 ~VdGVy~~dP~~~p~a~~i~~is~~e~~~~~~~~mk~~aa~~a~~~gv~v~I~~g~~~~~l~~~l~g~~~GT~i~ 255 (256)
T 2va1_A 181 GVDGVYDSDPKINPNAQFYEHITFNMALTQNLKVMDATALALCQENNINLLVFNIDKPNAIVDVLEKKNKYTIVS 255 (256)
T ss_dssp SCCSBCSCC--------CBSEEEHHHHHHHTCCSSCHHHHHHHHHTTCEEEEEESSSTTHHHHHHTTCSCEEEEE
T ss_pred ccCeEEcCCCCCCCCCEEccEEcHHHHHHhccCCccHHHHHHHHHCCCeEEEEeCCCchHHHHHHcCCCCeEEEe
Confidence 99999999999999999999999999877777789999999999999999999999999999999988999996
No 8
>2jjx_A Uridylate kinase, UMP kinase; structural genomics, pyrimidine biosynthesis, ATP-binding, nucleotide-binding, OPPF, PYRH, cytoplasm; HET: ATP; 2.82A {Bacillus anthracis}
Probab=100.00 E-value=6.9e-39 Score=295.87 Aligned_cols=218 Identities=43% Similarity=0.750 Sum_probs=188.0
Q ss_pred CCCeEEEEECccccccCCCCCC------------------CCCeEEEEChhHHHHHHHHcccCCCCccHHHHHHHHHHHH
Q 021163 89 KWQRVLLKVSGEALAGDHTQNI------------------DPKVAIVVGGGNIFRGASAAGNSGLDRSSADYIGMLATVM 150 (316)
Q Consensus 89 ~~k~iVIKiGGS~i~~~~~~~~------------------~~~vVIVhGGG~~a~G~~~l~~~gl~~~~~d~v~~la~~l 150 (316)
+++++|||+||++++++....+ ..++|||||||++++++. ++++++++...+.++++++.+
T Consensus 11 ~~~~iViKiGGs~l~~~~~~~~~~~~i~~~a~~I~~l~~~G~~vViV~GgG~~~~~~~-~~~~g~~~~~~~~~~~~~~~~ 89 (255)
T 2jjx_A 11 PYKRVLIKLSGGALADQTGNSFNSKRLEHIANEILSIVDLGIEVSIVIGGGNIFRGHL-AEEWGIDRVEADNIGTLGTII 89 (255)
T ss_dssp BCSEEEEEECGGGTSCSSSCSCCHHHHHHHHHHHHHHHTTTCEEEEEECCTTTCCHHH-HHHTTCCHHHHHHHHHHHHHH
T ss_pred cCCEEEEEECHHHhCCCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEECchHHHhhhH-HHHcCCCCCChHHHhHHHHHH
Confidence 7899999999999997521111 136899999999987775 344578776667788899999
Q ss_pred HHHHHHHHHHh-CCCCeEEEeccccccccchHHHHHHHHHHhCCCEEEEeCCCCCCCCCchHHHHHHHHhcCCcEEEEec
Q 021163 151 NAIFLQATMES-IGIPTRVQTAFRMSEVAEPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKAT 229 (316)
Q Consensus 151 na~Lv~~~L~~-~Gi~a~~l~~~~~~~~~~~~i~~~l~~lL~~g~IPVv~g~~g~~~~~sD~iAa~LA~~L~Ad~LiilT 229 (316)
|+.++..+|.+ +|+++.++++.+...+.+++....+..+|+.|.|||++|+.|++++++|++|+++|.+|+||+|++||
T Consensus 90 ~~~ll~~~l~~~~Gi~a~~l~~~~~~~v~~~~~~~~~~~lL~~g~IpVi~gg~g~~~vttD~~Aa~lA~~l~Ad~liilT 169 (255)
T 2jjx_A 90 NSLMLRGVLTSKTNKEVRVMTSIPFNAVAEPYIRLRAVHHLDNGYIVIFGGGNGQPFVTTDYPSVQRAIEMNSDAILVAK 169 (255)
T ss_dssp HHHHHHHHHHHHCSSCEEEEESSCCCSSSEECCHHHHHHHHHTTCEEEEESTTSCSSCCSHHHHHHHHHHHTCSEEEEEE
T ss_pred HHHHHHHHHHhhcCCceEEecHHHcCcccCcccHHHHHHHHhCCcEEEEeCCCCCCccchHHHHHHHHHhcCCCEEEEEe
Confidence 99988889999 99999988887665444444434455889999999999866778899999999999999999999999
Q ss_pred -ccCcccccCCCCCCCCceeccccHHHHhhCCCCCchHHHHHHHHhCCCcEEEEeCCCcchHHHHhcCCCcceEEecCC
Q 021163 230 -NVDGVYDDNPRRNPNARLLDTLTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQGERVGTLIGGTW 307 (316)
Q Consensus 230 -DVdGVyt~dP~~~p~aklI~~It~~e~~~lG~~v~k~~Aa~~a~~~gI~v~I~ng~~p~~i~~~l~G~~~GT~I~~~~ 307 (316)
||||||++||+.+|++++|++|+++|+.++|.++|++.|++.|.+.|++++|+|+++|+++.++++|+..||+|.++.
T Consensus 170 ~DVdGVy~~dP~~~p~a~~i~~is~~e~~~~G~~~m~~~a~~~a~~~gi~v~I~~~~~~~~l~~~l~g~~~GT~I~~~~ 248 (255)
T 2jjx_A 170 QGVDGVFTSDPKHNKSAKMYRKLNYNDVVRQNIQVMDQAALLLARDYNLPAHVFNFDEPGVMRRICLGEHVGTLINDDA 248 (255)
T ss_dssp SSCCSCBSSCTTTCSSCCBCSEEEHHHHHHTTCCSSCHHHHHHHHHHTCCEEEEETTSTTHHHHHHBTCCCSEEEESSC
T ss_pred CCcCeeECCCCCCCCCCeEeeEecHHHHHHcCCccCHHHHHHHHHHcCCeEEEEeCCCchHHHHHhcCCCCceEEecCc
Confidence 999999999999999999999999999988989999999999999999999999999999999999988999998753
No 9
>2j4j_A Uridylate kinase; transferase, nucleoside monophosphate kinase, UMP kinase, aspartokinase fold, pyrimidine nucleotide synthesis; HET: U5P ACP 4TC; 2.1A {Sulfolobus solfataricus} PDB: 2j4k_A* 2j4l_A*
Probab=100.00 E-value=9.7e-38 Score=282.72 Aligned_cols=201 Identities=27% Similarity=0.430 Sum_probs=171.5
Q ss_pred CeEEEEECccccccCCCCC-------------CCCCeEEEEChhHHHHHH-HHcccCCCCccHHHHHHHHHHHHHHHHHH
Q 021163 91 QRVLLKVSGEALAGDHTQN-------------IDPKVAIVVGGGNIFRGA-SAAGNSGLDRSSADYIGMLATVMNAIFLQ 156 (316)
Q Consensus 91 k~iVIKiGGS~i~~~~~~~-------------~~~~vVIVhGGG~~a~G~-~~l~~~gl~~~~~d~v~~la~~lna~Lv~ 156 (316)
+++|||+||+++++++... ...++|||||||++++++ ..++++++++...|+++++++.+|+.|++
T Consensus 1 ~~iViK~GGs~l~~~~~~~~~~~~~~i~~l~~~g~~vvlV~ggG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~ 80 (226)
T 2j4j_A 1 MNIILKISGKFFDEDNVDNLIVLRQSIKELADNGFRVGIVTGGGSTARRYIKLAREIGIGEAYLDLLGIWASRLNAYLVM 80 (226)
T ss_dssp CEEEEEECTHHHHTCCHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEeccccccCCCHHHHHHHHHHHHHHHhCCCeEEEEECcchHhchhHHHHHHhCCCcccHHHHHHHHHHHHHHHHH
Confidence 4799999999998432111 134789999999999887 34555778888889999999999999998
Q ss_pred HHHHhCCCCeEEEeccccccccchHHHHHHHHHHhCCCEEEEeCCCCCCCCCchHHHHHHHHhcCCcEEEEecccCcccc
Q 021163 157 ATMESIGIPTRVQTAFRMSEVAEPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVDGVYD 236 (316)
Q Consensus 157 ~~L~~~Gi~a~~l~~~~~~~~~~~~i~~~l~~lL~~g~IPVv~g~~g~~~~~sD~iAa~LA~~L~Ad~LiilTDVdGVyt 236 (316)
.+|.++|++. . .. -.+.+..+|+.|.|||++| |.+++++|++|+++|.+|+|++|++||||||||+
T Consensus 81 ~~l~~~g~~~---~-----~~----~~~~i~~ll~~g~ipVi~g--g~~~~~~D~~Aa~lA~~l~Ad~liilTdVdGv~~ 146 (226)
T 2j4j_A 81 FSLQDLAYMH---V-----PQ----SLEEFIQDWSHGKVVVTGG--FQPGQSTAAVAALVAEASSSKTLVVATNVDGVYE 146 (226)
T ss_dssp HHHTTSBCSC---C-----CS----SHHHHHHHHTTSSBEEECC--CSTTSCHHHHHHHHHHHTTCSEEEEEESSSSCBS
T ss_pred HHHHHhCCCC---C-----cC----CHHHHHHHHHCCCEEEEcC--CCCCCCcHHHHHHHHHhcCCCEEEEeeccceeeC
Confidence 8999999965 1 11 1244677899999999999 6889999999999999999999999999999999
Q ss_pred cCCCCCCCCceeccccHHHHhhC--------CCC--CchHHHHHHHHhCCCcEEEEeCCCcchHHHHhcCCCcceEEec
Q 021163 237 DNPRRNPNARLLDTLTYQEVTSK--------DLS--VMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQGERVGTLIGG 305 (316)
Q Consensus 237 ~dP~~~p~aklI~~It~~e~~~l--------G~~--v~k~~Aa~~a~~~gI~v~I~ng~~p~~i~~~l~G~~~GT~I~~ 305 (316)
+||+.+|++++|++++++|+.++ |.| ++|++|+++|.++|++++|+|+++|+++.++++|+.+||+|.+
T Consensus 147 ~dP~~~~~a~~i~~i~~~e~~~l~~~~~~~~ggm~~~~k~~a~~~a~~~gi~v~I~~~~~~~~l~~~~~g~~~GT~i~~ 225 (226)
T 2j4j_A 147 KDPRIYADVKLIPHLTTQDLRKILEGSQSVQAGTYELLDPLAIKIVERSKIRVIVMNYRKLNRIIDILKGEEVSSIIEP 225 (226)
T ss_dssp SCTTTSSSCCBCSEEEHHHHHHHHC----------CCSCHHHHHHHHHTTCEEEEEEGGGGGGHHHHHTTCSSCEEEEC
T ss_pred CCCCCCCCCeEccccCHHHHHHHhhcCCCCcCCccccchHHHHHHHHHCCCeEEEEeCCChhHHHHHHcCCCCceEEee
Confidence 99999999999999999998764 335 8999999999999999999999999999999999989999975
No 10
>2brx_A Uridylate kinase; UMP kinase, amino acid kinase, phosphoryl group transfer, pyrimidine biosynthesis, transferase; 2.40A {Pyrococcus furiosus} SCOP: c.73.1.3 PDB: 2ji5_A* 2bmu_A* 2bri_A*
Probab=100.00 E-value=6.2e-37 Score=281.24 Aligned_cols=207 Identities=26% Similarity=0.411 Sum_probs=172.2
Q ss_pred CCCCCCCeEEEEECccccccCC--CCC----------C--CCCeEEEEChhHHHHHHH-HcccCCCCccHHHHHHHHHHH
Q 021163 85 KPSYKWQRVLLKVSGEALAGDH--TQN----------I--DPKVAIVVGGGNIFRGAS-AAGNSGLDRSSADYIGMLATV 149 (316)
Q Consensus 85 ~~~~~~k~iVIKiGGS~i~~~~--~~~----------~--~~~vVIVhGGG~~a~G~~-~l~~~gl~~~~~d~v~~la~~ 149 (316)
...++++++|||+||+++++++ ... + ..++|||||||++++++. .+++++++...++.++++++.
T Consensus 14 ~~~~~~k~iViKlGGs~l~~~~~~~~~i~~~~~~i~~l~~g~~vViV~GgG~~~~~~~~~~~~~gl~~~~~~~~~~~~~~ 93 (244)
T 2brx_A 14 VPRGSHMRIVFDIGGSVLVPENPDIDFIKEIAYQLTKVSEDHEVAVVVGGGKLARKYIEVAEKFNSSETFKDFIGIQITR 93 (244)
T ss_dssp -----CCEEEEEECHHHHCSSSCCHHHHHHHHHHHHHHHHHSEEEEEECCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHH
T ss_pred hhhhcccEEEEEechhhcCCCCCCHHHHHHHHHHHHHHhCCCeEEEEECccHHHhchHHHHHHcCCCcccHHHHHHHHHH
Confidence 4446788999999999998642 100 1 247899999999998863 455678888888999999999
Q ss_pred HHHHHHHHHHHhCCCCeEEEeccccccccchHHHHHHHHHHhCCCEEEEeCCCCCCCCCchHHHHHHHHhcCCcEEEEec
Q 021163 150 MNAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKAT 229 (316)
Q Consensus 150 lna~Lv~~~L~~~Gi~a~~l~~~~~~~~~~~~i~~~l~~lL~~g~IPVv~g~~g~~~~~sD~iAa~LA~~L~Ad~LiilT 229 (316)
+|+.|++.+|.++|++.. .+. .+.+.++|+.|.|||++| |.+++++|++|+++|.+|+||+|++||
T Consensus 94 ~~~~l~~~~l~~~g~~~~--------~~~----~~~i~~lL~~g~IpVi~g--g~~~~~~D~~Aa~lA~~l~Ad~liilT 159 (244)
T 2brx_A 94 ANAMLLIAALREKAYPVV--------VED----FWEAWKAVQLKKIPVMGG--THPGHTTDAVAALLAEFLKADLLVVIT 159 (244)
T ss_dssp HHHHHHHHHHGGGBCSSC--------BCS----HHHHHHHHHTTCBCEECC--CSTTCCHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHHHHcCCCCC--------cCC----HHHHHHHHhCCCEEEEcC--CCCCCCchHHHHHHHHHcCCCEEEEEe
Confidence 999999889999998651 111 134677899999999999 678899999999999999999999999
Q ss_pred ccCcccccCCCCCCCCceeccccHHHHhhC----CC-----CCchHHHHHHHHhCCCcEEEEeCCCcchHHHHhcCCCcc
Q 021163 230 NVDGVYDDNPRRNPNARLLDTLTYQEVTSK----DL-----SVMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQGERVG 300 (316)
Q Consensus 230 DVdGVyt~dP~~~p~aklI~~It~~e~~~l----G~-----~v~k~~Aa~~a~~~gI~v~I~ng~~p~~i~~~l~G~~~G 300 (316)
||||||++||+.+|++++|++|+++|+.++ |. +.+|+.|++.+.+.+++++|+|+++|+.+.++++|+.+|
T Consensus 160 DVdGVy~~dP~~~p~a~~i~~i~~~e~~~~~~~~g~~~g~m~~~~~~A~~~~~~~~~~v~I~ng~~~~~l~~~l~g~~~G 239 (244)
T 2brx_A 160 NVDGVYTADPKKDPTAKKIKKMKPEELLEIVGKGIEKAGSSSVIDPLAAKIIARSGIKTIVIGKEDAKDLFRVIKGDHNG 239 (244)
T ss_dssp SSSSCBSSCTTTCTTCCBCSEECHHHHHHHHHC--------CCSCHHHHHHHHHHTCCEEEECHHHHTCHHHHHTTCSSS
T ss_pred CCCccCCCCCCCCCCCeEeeEECHHHHHHHHhccCCCCCCCcchHHHHHHHHHHCCCeEEEEeCCChhHHHHHHcCCCCc
Confidence 999999999999999999999999998765 33 577999999999999999999999999999999998899
Q ss_pred eEEec
Q 021163 301 TLIGG 305 (316)
Q Consensus 301 T~I~~ 305 (316)
|+|.+
T Consensus 240 T~i~~ 244 (244)
T 2brx_A 240 TTIEP 244 (244)
T ss_dssp EEECC
T ss_pred eEecC
Confidence 99964
No 11
>2ij9_A Uridylate kinase; structural genomics, protein structure initiative, P nysgxrc; 2.90A {Archaeoglobus fulgidus} SCOP: c.73.1.3
Probab=100.00 E-value=7e-35 Score=262.55 Aligned_cols=198 Identities=34% Similarity=0.486 Sum_probs=164.4
Q ss_pred CeEEEEECccccccC-CC-CC-------C--CCCeEEEEChhHHHHHHH-HcccCCCCccHHHHHHHHHHHHHHHHHHHH
Q 021163 91 QRVLLKVSGEALAGD-HT-QN-------I--DPKVAIVVGGGNIFRGAS-AAGNSGLDRSSADYIGMLATVMNAIFLQAT 158 (316)
Q Consensus 91 k~iVIKiGGS~i~~~-~~-~~-------~--~~~vVIVhGGG~~a~G~~-~l~~~gl~~~~~d~v~~la~~lna~Lv~~~ 158 (316)
+++|||+||++++++ +. .. + ..++|||||||++++++. .++++++++..+++++++++.+|+.|++.+
T Consensus 1 ~~iViK~GGs~l~~~~~~~~~~~~~i~~l~~g~~vvlV~ggG~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~l~~~~ 80 (219)
T 2ij9_A 1 MKVVLSLGGSVLSNESEKIREFAKTIESVAQQNQVFVVVGGGKLAREYIKSARELGASETFCDYIGIAATRLNAMLLISA 80 (219)
T ss_dssp CEEEEEECSSTTTTCHHHHHHHHHHHHHHHHHSEEEEEECCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEeChhhhCChHHHHHHHHHHHHHHcCCCEEEEEECcchHhcchHHHHHHcCCCccchHHHHHHHHHHHHHHHHHH
Confidence 479999999999872 11 01 1 247899999999998852 345568888888999999999999999866
Q ss_pred HHhCCCCeEEEeccccccccchHHHHHHHHHHhCCCEEEEeCCCCCCCCCchHHHHHHHHhcCCcEEEEecccCcccccC
Q 021163 159 MESIGIPTRVQTAFRMSEVAEPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVDGVYDDN 238 (316)
Q Consensus 159 L~~~Gi~a~~l~~~~~~~~~~~~i~~~l~~lL~~g~IPVv~g~~g~~~~~sD~iAa~LA~~L~Ad~LiilTDVdGVyt~d 238 (316)
|+. ++. + +++-.+.+..+|+.|.|||++| |.+++++|++|+++|.+|+|++|++||||||||++|
T Consensus 81 ~~~-~~~---~---------~~~~~~~i~~ll~~g~ipVi~~--g~~~~~~D~~Aa~lA~~l~Ad~li~lTdVdGv~~~d 145 (219)
T 2ij9_A 81 IPS-AAK---K---------VPVDFMEAEELSKLYRVVVMGG--TFPGHTTDATAALLAEFIKADVFINATNVDGVYSAD 145 (219)
T ss_dssp CTT-BCS---S---------CCSSHHHHHHHHTTCSEEEECC--CSSSSCTHHHHHHHHHHTTCSEEEEEESSSSCBCSS
T ss_pred HHH-hcC---C---------CcCCHHHHHHHHHCCCEEEEeC--CCCCCCchHHHHHHHHHcCCCeEEEeeCCCceecCC
Confidence 643 321 1 1111134678999999999999 678899999999999999999999999999999999
Q ss_pred CCCCCCCceeccccHHHHhhC----CC-----CCchHHHHHHHHhCCCcEEEEeCCCcchHHHHhcCCCcceEEe
Q 021163 239 PRRNPNARLLDTLTYQEVTSK----DL-----SVMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQGERVGTLIG 304 (316)
Q Consensus 239 P~~~p~aklI~~It~~e~~~l----G~-----~v~k~~Aa~~a~~~gI~v~I~ng~~p~~i~~~l~G~~~GT~I~ 304 (316)
|+.+|++++|++++++|+.++ |. +..|+.|++.|.+.+++++|+|+ +|+.+.++++|+.+||+|.
T Consensus 146 P~~~~~a~~i~~i~~~e~~~~~~~~g~~~g~~~~~~~~a~~~~~~~~~~v~I~~g-~~~~l~~~~~g~~~GT~i~ 219 (219)
T 2ij9_A 146 PKSDTSAVKYDRLSPQQLVEIVSRSSAKAGTNVVIDLLAAKIIERSKIKTYVILG-TPENIMKAVKGEAVGTVIA 219 (219)
T ss_dssp CSSSSSCCBCSEECHHHHHHHTCC-----CCCCCSCHHHHHHHHHHTCCEEEEEC-CHHHHHHHHTTCCCSEEEC
T ss_pred CCCCCCCeEeeeeCHHHHHHHHhcCCCCCCCccchHHHHHHHHHHCCCeEEEEEC-CHhHHHHHHcCCCCCeEeC
Confidence 999999999999999998764 33 57799999999999999999999 9999999999998999984
No 12
>2j5v_A Glutamate 5-kinase; proline biosynthesis, gamma glutamyl kinase, amino-acid biosynthesis, transferase, feedback regulation, PUA domain; HET: RGP; 2.5A {Escherichia coli} PDB: 2j5t_A* 2w21_A
Probab=100.00 E-value=5.3e-34 Score=276.44 Aligned_cols=220 Identities=19% Similarity=0.291 Sum_probs=148.6
Q ss_pred CCCeEEEEECccccccCCCCCC------------------CCCeEEEEChhHHHHHHHHcccCCCCc--cHHHHHHHHHH
Q 021163 89 KWQRVLLKVSGEALAGDHTQNI------------------DPKVAIVVGGGNIFRGASAAGNSGLDR--SSADYIGMLAT 148 (316)
Q Consensus 89 ~~k~iVIKiGGS~i~~~~~~~~------------------~~~vVIVhGGG~~a~G~~~l~~~gl~~--~~~d~v~~la~ 148 (316)
++|++|||+||++++++.. .+ ..++||||||| .+.|+..++ ++. ..++..++++.
T Consensus 3 ~~k~iVIKiGGs~l~~~~~-~~~~~~l~~la~~Ia~l~~~G~~vVlV~gGg-i~~g~~~lg---~~~~~~~l~~~qa~aa 77 (367)
T 2j5v_A 3 DSQTLVVKLGTSVLTGGSR-RLNRAHIVELVRQCAQLHAAGHRIVIVTSGA-IAAGREHLG---YPELPATIASKQLLAA 77 (367)
T ss_dssp CCCEEEEEECHHHHTTTSS-SCCHHHHHHHHHHHHHHHHTTCEEEEEECCH-HHHHHHHHT---SCCCCSSHHHHHHHHH
T ss_pred CCCEEEEEECcHHhcCCCC-CcCHHHHHHHHHHHHHHHhCCCcEEEEEcCH-HHHHHHHcC---CCCCCCCHHHHHHHHH
Confidence 5689999999999998631 12 13679999988 556776664 433 23455666554
Q ss_pred HHH---HHHHHHHHHhCCCCeEEEeccccccccc--hHHHH--HHHHHHhCCCEEEEeCC-----CCCCCCCchHHHHHH
Q 021163 149 VMN---AIFLQATMESIGIPTRVQTAFRMSEVAE--PYIRR--RAVRHLEKGRVVIFAAG-----TGNPFFTTDTAAALR 216 (316)
Q Consensus 149 ~ln---a~Lv~~~L~~~Gi~a~~l~~~~~~~~~~--~~i~~--~l~~lL~~g~IPVv~g~-----~g~~~~~sD~iAa~L 216 (316)
..+ ..++..+|+++|+++. |...+..++.. +|+|. .+..+|+.|.|||++++ ++..+++||++|+++
T Consensus 78 vGq~~l~~~~~~~l~~~G~~~~-qvllt~~d~~~~~r~~n~~~~i~~LL~~g~IPIv~end~v~~~el~~gd~D~lAa~v 156 (367)
T 2j5v_A 78 VGQSRLIQLWEQLFSIYGIHVG-QMLLTRADMEDRERFLNARDTLRALLDNNVVPVINENDAVATAEIKVGDNDNLSALA 156 (367)
T ss_dssp HHHHHHHHHHHHHHHTTTCCEE-EEEECGGGGSSHHHHHHHHHHHHHHHHTTCEEEEEECTTSCCGGGCCCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCceE-EEEEecccccCceEEEhHHHHHHHHHHCCCEEEECCCCceecccccCCCHHHHHHHH
Confidence 433 3456778999999987 65665555554 35553 46789999999999965 345689999999999
Q ss_pred HHhcCCcEEEEecccCcccccCCCCCCCCceeccccH--HHHhhC--------C--CCCchHHHHHHHHhCCCcEEEEeC
Q 021163 217 CAEINAEVVLKATNVDGVYDDNPRRNPNARLLDTLTY--QEVTSK--------D--LSVMDMTAITLCQENNIPVVVFNL 284 (316)
Q Consensus 217 A~~L~Ad~LiilTDVdGVyt~dP~~~p~aklI~~It~--~e~~~l--------G--~~v~k~~Aa~~a~~~gI~v~I~ng 284 (316)
|.+++||+|+|||||||||++||+.+|++++|+++++ +|+.++ | .|.+|++|++.|.++|++++|+|+
T Consensus 157 A~~l~Ad~LiilTDVdGvy~~dP~~~p~a~~I~~i~~~~~e~~~l~~~~~s~~gtGgM~~Kl~Aa~~a~~~Gv~v~I~~g 236 (367)
T 2j5v_A 157 AILAGADKLLLLTDQKGLYTADPRSNPQAELIKDVYGIDDALRAIAGDSVSGLGTGGMSTKLQAADVACRAGIDTIIAAG 236 (367)
T ss_dssp HHHHTCSEEEEEECC------------------------------------------CHHHHHHHHHHHHTTCEEEEEET
T ss_pred HHhcCCCEEEEeecCCceECCCCCCCCCCeEeeeeCCCHHHHHHHhhccCCCcCcCccHHHHHHHHHHHHcCCCEEEEcC
Confidence 9999999999999999999999999999999999999 777654 2 245588999999999999999999
Q ss_pred CCcchHHHHhcCCCcceEEecCCCcccccc
Q 021163 285 NQPGNIAKAIQGERVGTLIGGTWNSTVSKT 314 (316)
Q Consensus 285 ~~p~~i~~~l~G~~~GT~I~~~~~~~~~~~ 314 (316)
++|+.|.++++|+..||+|.+..++..+|.
T Consensus 237 ~~~~~L~~~l~g~~~GT~i~~~~~~~~~rk 266 (367)
T 2j5v_A 237 SKPGVIGDVMEGISVGTLFHAQATPLENRK 266 (367)
T ss_dssp TSTTHHHHHHHTCCCSEEECCCSSCCCGGG
T ss_pred CCchHHHHHhcCCCCcEEEEcCccccchhh
Confidence 999999999999999999998777766653
No 13
>3ll9_A Isopentenyl phosphate kinase; mevalonate biosynthesis isoprenoid, transferase; HET: ADP; 2.15A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=100.00 E-value=6.7e-34 Score=264.83 Aligned_cols=212 Identities=25% Similarity=0.352 Sum_probs=161.4
Q ss_pred CCeEEEEECccccccCCC-CC-C----------------CCCeEEEEChhHHHHHHHHcccCCCCccH-------HHHHH
Q 021163 90 WQRVLLKVSGEALAGDHT-QN-I----------------DPKVAIVVGGGNIFRGASAAGNSGLDRSS-------ADYIG 144 (316)
Q Consensus 90 ~k~iVIKiGGS~i~~~~~-~~-~----------------~~~vVIVhGGG~~a~G~~~l~~~gl~~~~-------~d~v~ 144 (316)
.|++|||+||+++++++. .. + ..++|||||||++ ++.+++++++.... .++.+
T Consensus 2 ~k~iVIKlGG~~l~~~~~~~~~~~~~~l~~l~~~i~~l~~~~~vlVhGGG~~--~~~~~~~~gi~~~~~~~~g~~~~~~G 79 (269)
T 3ll9_A 2 SHMIILKLGGSVITRKDSEEPAIDRDNLERIASEIGNASPSSLMIVHGAGSF--GHPFAGEYRIGSEIENEEDLRRRRFG 79 (269)
T ss_dssp -CCEEEEECHHHHEECCSSSCEECHHHHHHHHHHHHHHCCSSEEEEECCGGG--THHHHHHHTTTSCCCSHHHHHHHHHH
T ss_pred CCEEEEEEChhheecCccccccccHHHHHHHHHHHHHhcCCCEEEEECCcHH--HHHHHHHcCCCcccccCcccccccch
Confidence 578999999999998753 12 2 2478999999999 55444444554321 12345
Q ss_pred HHHHH-----HHHHHHHHHHHhCCCCeEEEecccccccc--c-hHHH-HHHHHHHhCCCEEEEeCC-----C--C-CCCC
Q 021163 145 MLATV-----MNAIFLQATMESIGIPTRVQTAFRMSEVA--E-PYIR-RRAVRHLEKGRVVIFAAG-----T--G-NPFF 207 (316)
Q Consensus 145 ~la~~-----lna~Lv~~~L~~~Gi~a~~l~~~~~~~~~--~-~~i~-~~l~~lL~~g~IPVv~g~-----~--g-~~~~ 207 (316)
+..+. +|+.+. ++|+++|++++++++.+..... + .+++ ..+..+|++|+|||++++ . + ..++
T Consensus 80 ~rvT~~~~~~ln~~l~-~~L~~~G~~a~~l~g~~~~~~~~g~v~~v~~~~i~~lL~~g~ipVi~~~~~~~~~~~g~~~~~ 158 (269)
T 3ll9_A 80 FALTQNWVKKLNSHVC-DALLAEGIPAVSMQPSAFIRAHAGRISHADISLIRSYLEEGMVPVVYGDVVLDSDRRLKFSVI 158 (269)
T ss_dssp HHHHHHHHHHHHHHHH-HHHHHTTCCEEECCGGGTEEEETTEEEEECCHHHHHHHHTTCEEEEECEEEEBSCTTTSEEEE
T ss_pred hhHHHHHHHHHHHHHH-HHHHHCCCcEEEEcchHcCeEecCeeeeecHHHHHHHHHCCCEEEECCCEEecccccCcceec
Confidence 54444 888755 5999999999988877653221 1 1122 446789999999999983 2 2 2457
Q ss_pred CchHHHHHHHHhcCCcEEEEecccCcccccCCCCCCCCceeccccHHHHhhC----------CCCCchHHHHHHHHhCCC
Q 021163 208 TTDTAAALRCAEINAEVVLKATNVDGVYDDNPRRNPNARLLDTLTYQEVTSK----------DLSVMDMTAITLCQENNI 277 (316)
Q Consensus 208 ~sD~iAa~LA~~L~Ad~LiilTDVdGVyt~dP~~~p~aklI~~It~~e~~~l----------G~~v~k~~Aa~~a~~~gI 277 (316)
++|++|+++|.+|+|++|++||||||||++||+.+|++++|+++++.|+.++ |.|..|++|+..|.++|+
T Consensus 159 ~~D~~Aa~lA~~l~Ad~li~ltdv~Gv~~~dp~~~~~a~~i~~i~~~e~~~~l~~~~~~~~tgGM~~Kl~aa~~a~~~Gv 238 (269)
T 3ll9_A 159 SGDQLINHFSLRLMPERVILGTDVDGVYTRNPKKHPDARLLDVIGSLDDLESLDGTLNTDVTGGMVGKIRELLLLAEKGV 238 (269)
T ss_dssp CHHHHHHHHHHHHCCSEEEEEESSSSCBSSCTTTCTTCCBCSBCCC-------------------SHHHHHHHHHHHTTC
T ss_pred chHHHHHHHHHHcCCCeEEEecCCCEEEcCCCCcCCcceEccccCHHHHHHHhcccCCCcCcCCcHHHHHHHHHHHhCCC
Confidence 8999999999999999999999999999999999999999999999887542 447789999999999999
Q ss_pred cEEEEeCCCcchHHHHhcCCCc-ceEEe
Q 021163 278 PVVVFNLNQPGNIAKAIQGERV-GTLIG 304 (316)
Q Consensus 278 ~v~I~ng~~p~~i~~~l~G~~~-GT~I~ 304 (316)
+++|+|+++|+++.++++|+.+ ||+|.
T Consensus 239 ~v~I~~g~~~~~l~~~~~g~~~~GT~i~ 266 (269)
T 3ll9_A 239 ESEIINAAVPGNIERALLGEEVRGTRIT 266 (269)
T ss_dssp CEEEEESSSTTHHHHHHHTCCCSSEEC-
T ss_pred eEEEEeCCCchHHHHHHCCCCCCcEEEE
Confidence 9999999999999999999998 99997
No 14
>3ll5_A Gamma-glutamyl kinase related protein; alternate mevalonate pathway, isopentenyl phsophate kinase, beta-alpha sandwich fold; HET: MSE ADP IPE ATP IP8; 1.99A {Thermoplasma acidophilum} PDB: 3lkk_A*
Probab=100.00 E-value=3.1e-33 Score=257.52 Aligned_cols=210 Identities=20% Similarity=0.287 Sum_probs=160.7
Q ss_pred CCCeEEEEECccccccCCC-CCC--------------CCCeE-EEEChhHHHHHHHHcccCCCCccH--HHHHHHHH---
Q 021163 89 KWQRVLLKVSGEALAGDHT-QNI--------------DPKVA-IVVGGGNIFRGASAAGNSGLDRSS--ADYIGMLA--- 147 (316)
Q Consensus 89 ~~k~iVIKiGGS~i~~~~~-~~~--------------~~~vV-IVhGGG~~a~G~~~l~~~gl~~~~--~d~v~~la--- 147 (316)
++|++|||+||+++++++. ..+ ..++| ||||||+++ ..++++++++... .|..++..
T Consensus 2 ~~k~iViKiGG~~l~~~~~~~~l~~~~l~~l~~~i~~G~~vv~lVhGGG~~~--~~~~~~~gi~~~~~~~d~~gl~~t~~ 79 (249)
T 3ll5_A 2 PFTMMILKIGGSVITDKSAYRTARTYAIRSIVKVLSGIEDLVCVVHGGGSFG--HIKAMEFGLPGPKNPRSSIGYSIVHR 79 (249)
T ss_dssp --CCEEEEECHHHHBCTTSTTCBCHHHHHHHHHHHHTCTTEEEEEECCGGGT--HHHHHHHTCSEECCHHHHHHHHHHHH
T ss_pred CceEEEEEECccEEecCcccccchHHHHHHHHHHHhcCCceEEEEECccHHH--HHHHHHhCCCcCCCccccccHHHHHH
Confidence 3689999999999998642 112 24789 999999994 4444445676653 33333333
Q ss_pred --HHHHHHHHHHHHHhCCCCeEEEeccccccccchHHHHHHHHHHhCCCEEEEeCC----CC--CCCCCchHHHHHHHHh
Q 021163 148 --TVMNAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAVRHLEKGRVVIFAAG----TG--NPFFTTDTAAALRCAE 219 (316)
Q Consensus 148 --~~lna~Lv~~~L~~~Gi~a~~l~~~~~~~~~~~~i~~~l~~lL~~g~IPVv~g~----~g--~~~~~sD~iAa~LA~~ 219 (316)
..+|+.++ ++|+++|++++++++.+.....+. ....+..+|++|.|||++++ .+ ..++++|++|+++|.+
T Consensus 80 ~~~~ln~~~v-~~l~~~G~~a~~l~~~~~~~~g~v-~~~~i~~ll~~g~ipVi~~~~~~~~~~~~~~~~~D~~Aa~lA~~ 157 (249)
T 3ll5_A 80 DMENLDLMVI-DAMIEMGMRPISVPISALRYDGRF-DYTPLIRYIDAGFVPVSYGDVYIKDEHSYGIYSGDDIMADMAEL 157 (249)
T ss_dssp HHHHHHHHHH-HHHHHTTCCEEECCGGGSCBSSSB-CCHHHHHHHHTTCEEEEECEEEEEETTEEEEECHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HHHHHCCCcEEEEcHHHcccccEE-cHHHHHHHHHCCCEEEECCCEEEcCCCceeeecHHHHHHHHHHh
Confidence 37898888 689999999998877665433332 11346789999999999973 12 3468999999999999
Q ss_pred cCCcEEEEecccCcccccCCCCCCCCceeccccHHHHhh-------CCCCCchHHHHHHH-HhCCCcEEEEeCCCcchHH
Q 021163 220 INAEVVLKATNVDGVYDDNPRRNPNARLLDTLTYQEVTS-------KDLSVMDMTAITLC-QENNIPVVVFNLNQPGNIA 291 (316)
Q Consensus 220 L~Ad~LiilTDVdGVyt~dP~~~p~aklI~~It~~e~~~-------lG~~v~k~~Aa~~a-~~~gI~v~I~ng~~p~~i~ 291 (316)
|+|++|+++|||||||++||+.+|++++++++. +++.. .|.|..|++|+..+ .++|++++|+|+++|+++.
T Consensus 158 l~Ad~li~ltdvdGv~~~dp~~~~~a~~i~~i~-~~~~~~~~~~~~tGgM~~Kl~aA~~a~~~~Gv~v~I~~g~~~~~l~ 236 (249)
T 3ll5_A 158 LKPDVAVFLTDVDGIYSKDPKRNPDAVLLRDID-TNITFDRVQNDVTGGIGKKFESMVKMKSSVKNGVYLINGNHPERIG 236 (249)
T ss_dssp HCCSEEEEEESSSSCBSSCTTTCTTCCBCCEEC-CCC-------------HHHHHHHHHHHTTCTTCEEEEETTSGGGGG
T ss_pred cCCCEEEEEeCCCccCCCCCCCCCCcEEHHHHH-HHHhcccCCCeeECCHHHHHHHHHHHHHhcCCEEEEEeCCChhHHH
Confidence 999999999999999999999999999999995 22221 15577899999998 8999999999999999999
Q ss_pred HHhcCCCc-ceEEe
Q 021163 292 KAIQGERV-GTLIG 304 (316)
Q Consensus 292 ~~l~G~~~-GT~I~ 304 (316)
+ +.|+.+ ||+|.
T Consensus 237 ~-l~g~~~~GT~i~ 249 (249)
T 3ll5_A 237 D-IGKESFIGTVIR 249 (249)
T ss_dssp G-TTSTTCCSEEEC
T ss_pred H-hCCCCCCCEEeC
Confidence 9 999888 99983
No 15
>2ogx_A Molybdenum storage protein subunit alpha; open alpha/beta structure, metal binding protein; HET: ATP; 1.60A {Azotobacter vinelandii}
Probab=100.00 E-value=8.5e-32 Score=251.50 Aligned_cols=205 Identities=24% Similarity=0.303 Sum_probs=166.0
Q ss_pred eEEEEECccccccCCCC---C---------CCCCeEEEEChhHHHHHHHHcc-cCCCCccHHHHHHHHHHHHHHHHHHHH
Q 021163 92 RVLLKVSGEALAGDHTQ---N---------IDPKVAIVVGGGNIFRGASAAG-NSGLDRSSADYIGMLATVMNAIFLQAT 158 (316)
Q Consensus 92 ~iVIKiGGS~i~~~~~~---~---------~~~~vVIVhGGG~~a~G~~~l~-~~gl~~~~~d~v~~la~~lna~Lv~~~ 158 (316)
++|||+||+ +++++.. . ...++|||||||++++.+..++ ..+++...++.+++.++.+|..+++.+
T Consensus 41 ~iVIKiGGs-l~~~~~~~l~~l~~~I~~l~~G~~vVlV~GGg~~~~~~~~~~~~~gl~~~~l~~v~~~~~~~n~~l~~~l 119 (276)
T 2ogx_A 41 LQVVKIGGR-VMDRGADAILPLVEELRKLLPEHRLLILTGAGVRARHVFSVGLDLGLPVGSLAPLAASEAGQNGHILAAM 119 (276)
T ss_dssp EEEEEECHH-HHTTTHHHHHHHHHHHHHHTTTCEEEEEECCTHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEChh-hcCCCHHHHHHHHHHHHHHhCCCeEEEEECcHHHHHHHHhccCcCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999 8774200 0 1347899999999976653332 367777778888888889999999877
Q ss_pred HHhCCCCeEEEeccccccccchHHHHHHHHHHhCCCEEEEeCCC-----C-----CCCCCchHHHHHHHHhcCCcEEEEe
Q 021163 159 MESIGIPTRVQTAFRMSEVAEPYIRRRAVRHLEKGRVVIFAAGT-----G-----NPFFTTDTAAALRCAEINAEVVLKA 228 (316)
Q Consensus 159 L~~~Gi~a~~l~~~~~~~~~~~~i~~~l~~lL~~g~IPVv~g~~-----g-----~~~~~sD~iAa~LA~~L~Ad~Liil 228 (316)
+..+|++.+.. ....+.+..+|++|.|||++|+. + .+++++|++|+++|.+|+|++|++|
T Consensus 120 l~~~g~~~v~~----------~~~~~~i~~lL~~g~IpVi~~~~~~~~~e~~G~~~~~~~~D~~Aa~lA~~l~Ad~Liil 189 (276)
T 2ogx_A 120 LASEGVSYVEH----------PTVADQLAIHLSATRAVVGSAFPPYHHHEFPGSRIPPHRADTGAFLLADAFGAAGLTIV 189 (276)
T ss_dssp HGGGTCCBCCH----------HHHHHHHHHHHHHSSEEEEESSCTTGGGCCSSSSSCSSCHHHHHHHHHHHHTCSEEEEE
T ss_pred HHhcCCCcccc----------cChHHHHHHHHhCCCEEEEcCCcccccccccCCcCCCCChHHHHHHHHHHcCCCEEEEE
Confidence 76889975411 11123467899999999999952 1 2678999999999999999999999
Q ss_pred cccCcccccCCC--CCCCCceeccccHHHHhhC-CCCCchHHHHHHHH--hCCCcEEEEeCCCcchHHHHhcCCCcceEE
Q 021163 229 TNVDGVYDDNPR--RNPNARLLDTLTYQEVTSK-DLSVMDMTAITLCQ--ENNIPVVVFNLNQPGNIAKAIQGERVGTLI 303 (316)
Q Consensus 229 TDVdGVyt~dP~--~~p~aklI~~It~~e~~~l-G~~v~k~~Aa~~a~--~~gI~v~I~ng~~p~~i~~~l~G~~~GT~I 303 (316)
|||||||++||+ .+|++++|++|++.|+.++ |.++|++++...+. +.+++++|+|+++|+++.++++|+..||+|
T Consensus 190 TDVdGvy~~dP~~~~~~~a~~i~~i~~~e~~~~~g~ggM~~K~~~~~~~~~~~~~v~I~~g~~~~~l~~~l~g~~~GT~i 269 (276)
T 2ogx_A 190 ENVDGIYTADPNGPDRGQARFLPETSATDLAKSEGPLPVDRALLDVMATARHIERVQVVNGLVPGRLTAALRGEHVGTLI 269 (276)
T ss_dssp ESSSSEESSCTTSTTGGGCCEESEEEHHHHHTSCSCCSSCHHHHHHHHTCSSCCEEEEEETTSTTHHHHHHTTCCCSEEE
T ss_pred eCCCccCCCCCCccCCCCCeEcceeCHHHHHHHhCcCChHHHHHHHHHHhcCCCeEEEEECCCccHHHHHHcCCCCceEE
Confidence 999999999998 8899999999999999887 66777777766666 568899999999999999999998899999
Q ss_pred ecCC
Q 021163 304 GGTW 307 (316)
Q Consensus 304 ~~~~ 307 (316)
.++.
T Consensus 270 ~~~~ 273 (276)
T 2ogx_A 270 RTGV 273 (276)
T ss_dssp ECSC
T ss_pred ccCC
Confidence 8764
No 16
>2ako_A Glutamate 5-kinase; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: ADP; 2.20A {Campylobacter jejuni} SCOP: c.73.1.3
Probab=100.00 E-value=2.3e-32 Score=251.02 Aligned_cols=207 Identities=16% Similarity=0.206 Sum_probs=157.8
Q ss_pred CCeEEEEECccccccCCCCCCC-----------------CCeEEEEChhHHHHHHHHcccCCCCc-cHHHHHHHHHHHHH
Q 021163 90 WQRVLLKVSGEALAGDHTQNID-----------------PKVAIVVGGGNIFRGASAAGNSGLDR-SSADYIGMLATVMN 151 (316)
Q Consensus 90 ~k~iVIKiGGS~i~~~~~~~~~-----------------~~vVIVhGGG~~a~G~~~l~~~gl~~-~~~d~v~~la~~ln 151 (316)
+|++|||+||++++ ++. .++ .++|||||||.. .+...++ ++. +..+ .++++...|
T Consensus 1 ~k~iViKlGGs~l~-~~~-~~~~~~~~~~~~~i~~l~~~~~vVlVhgGg~~-~~~~~~g---~~~~~~~~-~~~l~~~~q 73 (251)
T 2ako_A 1 MKRIVVKVGSHVIS-EEN-TLSFERLKNLVAFLAKLMEKYEVILVTSAAIS-AGHTKLD---IDRKNLIN-KQVLAAIGQ 73 (251)
T ss_dssp -CEEEEEECHHHHB-CSS-SBCHHHHHHHHHHHHHHHHHSEEEEEECCHHH-HHHHHCC---CCSSSHHH-HHHHHHHHH
T ss_pred CCEEEEEeCcceeC-CCC-CCCHHHHHHHHHHHHHHHhCCCEEEEECCHHH-HHHHHhC---CccCCchH-HHHHHHHHH
Confidence 37899999999999 421 111 368999999833 4555554 333 3333 245555555
Q ss_pred HHH---HHHHHHhCCCCeEEEeccccccccc--hHHHH--HHHHHHhCCCEEEEeCCCC-----CCCCCchHHHHHHHHh
Q 021163 152 AIF---LQATMESIGIPTRVQTAFRMSEVAE--PYIRR--RAVRHLEKGRVVIFAAGTG-----NPFFTTDTAAALRCAE 219 (316)
Q Consensus 152 a~L---v~~~L~~~Gi~a~~l~~~~~~~~~~--~~i~~--~l~~lL~~g~IPVv~g~~g-----~~~~~sD~iAa~LA~~ 219 (316)
..+ +.++|.++|+++. +...+..++.. ++++. .+..+|+.|.|||+++++. .+++++|++|+++|.+
T Consensus 74 ~~l~~~~~~~l~~~G~~~~-~i~~~~~~~~~~~~~~~~~~~i~~ll~~g~ipVi~~~d~v~~~~~~~~~~D~~Aa~lA~~ 152 (251)
T 2ako_A 74 PFLISVYNELLAKFNKLGG-QILLTGKDFDSRKATKHAKNAIDMMINLGILPIINENDATAIEEIVFGDNDSLSAYATHF 152 (251)
T ss_dssp HHHHHHHHHHHGGGTCCEE-EEEECTGGGGCHHHHHHHHHHHHHHHHTTCEEEEEECTTTCCHHHHBTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcEE-EEEeccchhcCcceEehHHHHHHHHHHCCCEEEEeCCCceeecceeecCchHHHHHHHHh
Confidence 443 5678999999987 43333334432 34543 3567899999999996532 3478999999999999
Q ss_pred cCCcEEEEecccCcccccCCCCCCCCceeccccHH--HHhhC----------CCCCchHHHHHHHHhCCCcEEEEeCCCc
Q 021163 220 INAEVVLKATNVDGVYDDNPRRNPNARLLDTLTYQ--EVTSK----------DLSVMDMTAITLCQENNIPVVVFNLNQP 287 (316)
Q Consensus 220 L~Ad~LiilTDVdGVyt~dP~~~p~aklI~~It~~--e~~~l----------G~~v~k~~Aa~~a~~~gI~v~I~ng~~p 287 (316)
|+|++|++||||||||++||+.+|++++|+++++. |+.++ |.|++|++|+..|.++|++++|+|+++|
T Consensus 153 l~Ad~liilTdVdGVy~~dP~~~~~a~~i~~i~~~~~e~~~~~~~~~~~~~~ggm~~k~~aa~~a~~~gv~v~I~~g~~~ 232 (251)
T 2ako_A 153 FDADLLVILSDIDGFYDKNPSEFSDAKRLEKITHIKEEWLQATIKTGSEHGTGGIVTKLKAAKFLLEHNKKMFLASGFDL 232 (251)
T ss_dssp TTCSEEEEEESSCSCBSSCTTTCTTCCBCCEESCCCGGGC---------CBSCHHHHHHHHHHHHHHTTCEEEEEESSSC
T ss_pred cCCCEEEEEeCCCceeeCCCCCCCCCeEeeEeccchHHHHHHhcccCCCCccCchHHHHHHHHHHHHCCCeEEEEeCCCh
Confidence 99999999999999999999999999999999998 76653 2357799999999999999999999999
Q ss_pred chHHH--HhcCCCcceEEe
Q 021163 288 GNIAK--AIQGERVGTLIG 304 (316)
Q Consensus 288 ~~i~~--~l~G~~~GT~I~ 304 (316)
+++.+ +++|+..||+|.
T Consensus 233 ~~l~~~~~~~g~~~GT~i~ 251 (251)
T 2ako_A 233 SVAKTFLLEDKQIGGTLFE 251 (251)
T ss_dssp HHHHHHHHSCCCCSSEEEC
T ss_pred hhhhhhHHhcCCCCceEeC
Confidence 99999 999988999984
No 17
>2ap9_A NAG kinase, acetylglutamate kinase, AGK; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.80A {Mycobacterium tuberculosis} SCOP: c.73.1.2
Probab=99.97 E-value=6.4e-32 Score=254.58 Aligned_cols=215 Identities=17% Similarity=0.174 Sum_probs=164.9
Q ss_pred CCCeEEEEECccccccCCCC-C----------CCCCeEEEEChhHHHHHH-HHccc-----CCCCc---cHHHHHHHH-H
Q 021163 89 KWQRVLLKVSGEALAGDHTQ-N----------IDPKVAIVVGGGNIFRGA-SAAGN-----SGLDR---SSADYIGML-A 147 (316)
Q Consensus 89 ~~k~iVIKiGGS~i~~~~~~-~----------~~~~vVIVhGGG~~a~G~-~~l~~-----~gl~~---~~~d~v~~l-a 147 (316)
+.+++|||+||+++++++.. . ...++|||||||+++... ..++. .|++. ..++.+++. .
T Consensus 24 ~~k~iViKlGGs~l~~~~~~~~~~~~i~~l~~~G~~vViVhGgG~~i~~~~~~~~~~~~~~~g~R~t~~~~l~~~~~~~~ 103 (299)
T 2ap9_A 24 HGKVVVVKYGGNAMTDDTLRRAFAADMAFLRNCGIHPVVVHGGGPQITAMLRRLGIEGDFKGGFRVTTPEVLDVARMVLF 103 (299)
T ss_dssp TTCEEEEEECTHHHHSHHHHHHHHHHHHHHHTTTCEEEEEECCSHHHHHHHHHHTCCCCCSSSSCCBCHHHHHHHHHHHH
T ss_pred CCCeEEEEECchhhCCchHHHHHHHHHHHHHHCCCcEEEEECCcHHHHHHHHHcCCcccccCCcccCCHHHHHHHHHHHh
Confidence 56899999999999875311 1 134789999999997544 33331 12222 245666663 4
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEecccccccc-ch-------------------HHH-HHHHHHHhCCCEEEEeCC----C
Q 021163 148 TVMNAIFLQATMESIGIPTRVQTAFRMSEVA-EP-------------------YIR-RRAVRHLEKGRVVIFAAG----T 202 (316)
Q Consensus 148 ~~lna~Lv~~~L~~~Gi~a~~l~~~~~~~~~-~~-------------------~i~-~~l~~lL~~g~IPVv~g~----~ 202 (316)
+.+|..+ +++|+++|+++++++..+...+. ++ .++ +.+..+|+.|.|||++++ .
T Consensus 104 G~l~~~l-~~~L~~~g~~av~lt~~d~~~~~~~~~~~~~~~~~~d~g~~g~v~~v~~~~i~~lL~~g~IpVv~~v~~~~~ 182 (299)
T 2ap9_A 104 GQVGREL-VNLINAHGPYAVGITGEDAQLFTAVRRSVTVDGVATDIGLVGDVDQVNTAAMLDLVAAGRIPVVSTLAPDAD 182 (299)
T ss_dssp HTHHHHH-HHHHTTSSSCEEEEETTGGGCEEEEECCBCSSSCCBCCBSEEEEEEECHHHHHHHHHTTCEEEEESEEECTT
T ss_pred hHHHHHH-HHHHHhCCCCceEechhHCCEEEEEecccccccccCCCCcceeEEEecHHHHHHHHhCCCeEEECCeeECCC
Confidence 4678774 57999999999988776532211 00 012 446789999999999984 2
Q ss_pred CCCCC-CchHHHHHHHHhcCCcEEEEecccCcccccCCCCCCCCceeccccHHHHhhC-----CCCCchHHHHHHHHhCC
Q 021163 203 GNPFF-TTDTAAALRCAEINAEVVLKATNVDGVYDDNPRRNPNARLLDTLTYQEVTSK-----DLSVMDMTAITLCQENN 276 (316)
Q Consensus 203 g~~~~-~sD~iAa~LA~~L~Ad~LiilTDVdGVyt~dP~~~p~aklI~~It~~e~~~l-----G~~v~k~~Aa~~a~~~g 276 (316)
|..++ ++|++|+++|.+|+|++|+|||||||||++||+ ++++|++|+++|+.++ |.|..|++|+..|.++|
T Consensus 183 G~~~~l~~D~~Aa~lA~~l~Ad~liilTDVdGV~~~dP~---~~~~i~~is~~e~~~l~~~~~ggM~~Kl~aa~~a~~~g 259 (299)
T 2ap9_A 183 GVVHNINADTAAAAVAEALGAEKLLMLTDIDGLYTRWPD---RDSLVSEIDTGTLAQLLPTLELGMVPKVEACLRAVIGG 259 (299)
T ss_dssp CCEEEECHHHHHHHHHHHTTCSEEEEEESSSSEETTTTC---TTCEESEEEHHHHHHHGGGSCTTTHHHHHHHHHHHHHT
T ss_pred CCEEEECHHHHHHHHHHHcCCCEEEEEeCChhhhcCCCC---CCcChhhcCHHHHHHHHHhhcCchHHHHHHHHHHHHcC
Confidence 33444 999999999999999999999999999999997 4799999999998764 44566999999999999
Q ss_pred Cc-EEEEeCCCcchH-HHHhcCCCcceEEecCC
Q 021163 277 IP-VVVFNLNQPGNI-AKAIQGERVGTLIGGTW 307 (316)
Q Consensus 277 I~-v~I~ng~~p~~i-~~~l~G~~~GT~I~~~~ 307 (316)
++ ++|+|+++|+++ .++++|+.+||+|.++.
T Consensus 260 v~~v~I~~g~~p~~ll~~l~~~~~~GT~i~~~~ 292 (299)
T 2ap9_A 260 VPSAHIIDGRVTHCVLVELFTDAGTGTKVVRGE 292 (299)
T ss_dssp CSEEEEEETTSTTHHHHHHHSCCCCSEEEECCC
T ss_pred CCEEEEecCCCCcHHHHHHhcCCCCcEEEecCC
Confidence 98 999999999987 78999999999998754
No 18
>2rd5_A Acetylglutamate kinase-like protein; protein-protein complex, regulation of arginine biosynthesis nitrogen metabolism, kinase, transferase, transcription; HET: ARG ADP NLG ATP; 2.51A {Arabidopsis thaliana}
Probab=99.97 E-value=7.9e-32 Score=253.98 Aligned_cols=213 Identities=16% Similarity=0.280 Sum_probs=162.9
Q ss_pred CCCeEEEEECccccccCCCC-C----------CCCCeEEEEChhHHHHHH-HHccc-----CCC---CccHHHHHHHHH-
Q 021163 89 KWQRVLLKVSGEALAGDHTQ-N----------IDPKVAIVVGGGNIFRGA-SAAGN-----SGL---DRSSADYIGMLA- 147 (316)
Q Consensus 89 ~~k~iVIKiGGS~i~~~~~~-~----------~~~~vVIVhGGG~~a~G~-~~l~~-----~gl---~~~~~d~v~~la- 147 (316)
++|++|||+||+++++++.. . ...++|||||||+++... ..++. .|+ ++..++.+++++
T Consensus 35 ~~k~iVIKlGGs~l~~~~~~~~~~~~i~~l~~~G~~vViVhGgG~~i~~~~~~~~~~~~~~~g~R~t~~~~l~~~~~~~~ 114 (298)
T 2rd5_A 35 RGKTIVVKYGGAAMTSPELKSSVVSDLVLLACVGLRPILVHGGGPDINRYLKQLNIPAEFRDGLRVTDATTMEIVSMVLV 114 (298)
T ss_dssp TTCEEEEEECTHHHHCHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHHTTCCCCEETTEECBCHHHHHHHHHHHH
T ss_pred cCCEEEEEECchhhCChhHHHHHHHHHHHHHHCCCCEEEEECCcHHHHHHHHHcCCCccccCCcccCCHHHHHHHHHHHh
Confidence 57899999999999875321 1 134789999999997543 23321 111 223467776654
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEecccccc-----------cc---c-hHHH-HHHHHHHhCCCEEEEeCC----CCCCCC
Q 021163 148 TVMNAIFLQATMESIGIPTRVQTAFRMSE-----------VA---E-PYIR-RRAVRHLEKGRVVIFAAG----TGNPFF 207 (316)
Q Consensus 148 ~~lna~Lv~~~L~~~Gi~a~~l~~~~~~~-----------~~---~-~~i~-~~l~~lL~~g~IPVv~g~----~g~~~~ 207 (316)
+.+|..+. ..|+++|++++++++.+... +. . .+++ +.+..+|++|.|||+++. .|..++
T Consensus 115 G~~n~~l~-~~l~~~g~~a~~l~~~~~~~l~~~~~~~~~d~g~~g~v~~v~~~~i~~lL~~g~IpVi~~v~~~~~G~~~~ 193 (298)
T 2rd5_A 115 GKVNKNLV-SLINAAGATAVGLSGHDGRLLTARPVPNSAQLGFVGEVARVDPSVLRPLVDYGYIPVIASVAADDSGQAYN 193 (298)
T ss_dssp HTHHHHHH-HHHHHTTSCEEEEETTGGGCEEEEECTTHHHHBSEEEEEEECGGGHHHHHHTTCEEEEESEEECTTSCEEE
T ss_pred chHHHHHH-HHHHhCCCCccccChHHCCEEEEEeCCccccCCcceEEEEECHHHHHHHHhCCCEEEEcCeeECCCCCEEE
Confidence 57787554 69999999998877654321 11 0 1122 335679999999999984 234444
Q ss_pred -CchHHHHHHHHhcCCcEEEEecccCcccccCCCCCCCCceeccccHHHHhhC-------CCCCchHHHHHHHHhCCCc-
Q 021163 208 -TTDTAAALRCAEINAEVVLKATNVDGVYDDNPRRNPNARLLDTLTYQEVTSK-------DLSVMDMTAITLCQENNIP- 278 (316)
Q Consensus 208 -~sD~iAa~LA~~L~Ad~LiilTDVdGVyt~dP~~~p~aklI~~It~~e~~~l-------G~~v~k~~Aa~~a~~~gI~- 278 (316)
++|++|+++|.+|+||+|+|+|||||||++||+ | +++|++|+++|+.++ |.|..|++|+..|.++|++
T Consensus 194 i~~D~~Aa~lA~~l~Ad~LiilTdVdGVy~~dp~--~-a~~i~~is~~e~~~~~~~g~~~gGM~~Kl~aa~~a~~~gv~~ 270 (298)
T 2rd5_A 194 INADTVAGELAAALGAEKLILLTDVAGILENKED--P-SSLIKEIDIKGVKKMIEDGKVAGGMIPKVKCCIRSLAQGVKT 270 (298)
T ss_dssp ECHHHHHHHHHHHHTCSEEEEEESSSSEESSSSC--T-TSEECEEEHHHHHHHHHTTSSCTTHHHHHHHHHHHHHTTCSE
T ss_pred ECHHHHHHHHHHHcCCCEEEEEeCCcCeecCCCC--C-CCCcccCCHHHHHHHHHCCCCCCchHHHHHHHHHHHHcCCCe
Confidence 999999999999999999999999999999997 4 899999999998764 2356689999999999998
Q ss_pred EEEEeCCCcchH-HHHhcCCCcceEEec
Q 021163 279 VVVFNLNQPGNI-AKAIQGERVGTLIGG 305 (316)
Q Consensus 279 v~I~ng~~p~~i-~~~l~G~~~GT~I~~ 305 (316)
++|+|++.|+.| .++++|+..||+|.+
T Consensus 271 v~I~~g~~~~~ll~~l~~~~~~GT~i~~ 298 (298)
T 2rd5_A 271 ASIIDGRRQHSLLHEIMSDEGAGTMITG 298 (298)
T ss_dssp EEEEETTSTTHHHHHHHSSSCSEEEEEC
T ss_pred EEEecCCCCchHHHHHhcCCCCceEEeC
Confidence 999999999999 789999889999964
No 19
>2ogx_B Molybdenum storage protein subunit beta; open alpha/beta structure, metal binding protein; HET: ATP; 1.60A {Azotobacter vinelandii}
Probab=99.97 E-value=7.8e-31 Score=244.09 Aligned_cols=204 Identities=23% Similarity=0.362 Sum_probs=156.1
Q ss_pred CeEEEEECccccccCCCC---C-------C--CCCeEEEEChhHHHHHHHHcc-cCCCCccHHHHHHHHHHHHHHHHHHH
Q 021163 91 QRVLLKVSGEALAGDHTQ---N-------I--DPKVAIVVGGGNIFRGASAAG-NSGLDRSSADYIGMLATVMNAIFLQA 157 (316)
Q Consensus 91 k~iVIKiGGS~i~~~~~~---~-------~--~~~vVIVhGGG~~a~G~~~l~-~~gl~~~~~d~v~~la~~lna~Lv~~ 157 (316)
+++|||+||++++++... . + ..++|||||||.+++++..++ ..+++....+...+.+.-.+..++++
T Consensus 37 ~~iVIKlGGs~l~~~~~~~~~~la~~I~~l~~~~~vVlVhGGg~~~~~~~~~~~~~g~~~~~~~~~~~~a~G~~~l~~~~ 116 (270)
T 2ogx_B 37 DATVIKIGGQSVIDRGRAAVYPLVDEIVAARKNHKLLIGTGAGTRARHLYSIAAGLGLPAGVLAQLGSSVADQNAAMLGQ 116 (270)
T ss_dssp TEEEEEECTTTTGGGCHHHHHHHHHHHHHHTTTCEEEEEECCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEechHHhCCCCHHHHHHHHHHHHHHhcCCcEEEEECChHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHH
Confidence 599999999999974210 0 1 146899999999876654332 24666555555555444466666777
Q ss_pred HHHhCCCCeEEEeccccccccchHHHHHHHHHHhCCCEEEEeCCCC------------CCCCCchHHHHHHHHhcCCcEE
Q 021163 158 TMESIGIPTRVQTAFRMSEVAEPYIRRRAVRHLEKGRVVIFAAGTG------------NPFFTTDTAAALRCAEINAEVV 225 (316)
Q Consensus 158 ~L~~~Gi~a~~l~~~~~~~~~~~~i~~~l~~lL~~g~IPVv~g~~g------------~~~~~sD~iAa~LA~~L~Ad~L 225 (316)
.|.++|++.+ +..++. .+.++|++|.|||++|+.+ ++++++|++|+++|.+|+|++|
T Consensus 117 ~l~~~G~~~v-----t~~d~~------~i~~lL~~g~ipVi~g~~g~~~~~~~~~~g~~~~~~~D~~Aa~lA~~l~Ad~L 185 (270)
T 2ogx_B 117 LLAKHGIPVV-----GGAGLS------AVPLSLAEVNAVVFSGMPPYKLWMRPAAEGVIPPYRTDAGCFLLAEQFGCKQM 185 (270)
T ss_dssp HHGGGTCCBC-----CSSTTC------HHHHHCTTCCEEEEECSCTTGGGCCCCSSSSSCSSCHHHHHHHHHHHHTCSEE
T ss_pred HHHhcCCcee-----cHhhHH------HHHHHHhCCCEEEEeCCccccccccccccccCCCCCcHHHHHHHHHhcCCCEE
Confidence 7888999842 111221 3677899999999998622 3568999999999999999999
Q ss_pred EEecccCcccccCCCCCCCCceeccccHHHHhhCC--CCCchHHHHHHHHh--CCCcEEEEeCCCcchHHHHhcCCCcce
Q 021163 226 LKATNVDGVYDDNPRRNPNARLLDTLTYQEVTSKD--LSVMDMTAITLCQE--NNIPVVVFNLNQPGNIAKAIQGERVGT 301 (316)
Q Consensus 226 iilTDVdGVyt~dP~~~p~aklI~~It~~e~~~lG--~~v~k~~Aa~~a~~--~gI~v~I~ng~~p~~i~~~l~G~~~GT 301 (316)
++||||||||++||+.+|++++|++++++|+.++. ...++......+.. .+++++|+|+++|+++.++++|+.+||
T Consensus 186 i~lTDVdGvy~~dP~~~~~a~~i~~i~~~e~~~~~~~g~~~~ggm~~kl~aa~~~~~v~I~~g~~~~~l~~~l~g~~~GT 265 (270)
T 2ogx_B 186 IFVKDEDGLYTANPKTSKDATFIPRISVDEMKAKGLHDSILEFPVLDLLQSAQHVREVQVVNGLVPGNLTRALAGEHVGT 265 (270)
T ss_dssp EEEESSSSEESSCSSSCTTCCEESEEEHHHHHHTTCCCTTSCHHHHHHHHHCSSCCEEEEEETTSTTHHHHHHTTCCCSE
T ss_pred EEEeCCCcccCCCCCCCCCCeEcceeCHHHHHHHhcCCCcccHHHHHHHHHhhcCCcEEEEeCCCchHHHHHHcCCCCCe
Confidence 99999999999999999999999999999988762 22555544444333 577999999999999999999999999
Q ss_pred EEec
Q 021163 302 LIGG 305 (316)
Q Consensus 302 ~I~~ 305 (316)
+|.+
T Consensus 266 ~i~~ 269 (270)
T 2ogx_B 266 IITA 269 (270)
T ss_dssp EEEC
T ss_pred EecC
Confidence 9975
No 20
>2v5h_A Acetylglutamate kinase; amino-acid biosynthesis, transcription regulation, transfera cyanobacteria, transcription; HET: NLG; 2.75A {Synechococcus elongatus} PDB: 2jj4_A*
Probab=99.97 E-value=2.5e-31 Score=253.31 Aligned_cols=216 Identities=17% Similarity=0.252 Sum_probs=163.5
Q ss_pred CCCCeEEEEECccccccCCC-CC----------CCCCeEEEEChhHHHHHH-HHccc-----CCCC---ccHHHHHHHHH
Q 021163 88 YKWQRVLLKVSGEALAGDHT-QN----------IDPKVAIVVGGGNIFRGA-SAAGN-----SGLD---RSSADYIGMLA 147 (316)
Q Consensus 88 ~~~k~iVIKiGGS~i~~~~~-~~----------~~~~vVIVhGGG~~a~G~-~~l~~-----~gl~---~~~~d~v~~la 147 (316)
.+++++|||+||+++++++. .. ...++|||||||+++... ..++. .|++ +..++.+++++
T Consensus 47 ~~~k~iVIKlGGs~l~~~~~~~~l~~~i~~l~~~G~~vVlVhGgG~~i~~~~~~~g~~~~~~~g~Rvt~~~~l~~~~~~~ 126 (321)
T 2v5h_A 47 FAGRTVVVKYGGAAMKQEELKEAVMRDIVFLACVGMRPVVVHGGGPEINAWLGRVGIEPQFHNGLRVTDADTMEVVEMVL 126 (321)
T ss_dssp TTTCEEEEEECTHHHHSHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHHTTCCCCBSSSSBCBCHHHHHHHHHHH
T ss_pred hCCCeEEEEECchhhCCchHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCccccCCcccCCHHHHHHHHHHH
Confidence 46789999999999987531 11 134789999999997543 23321 1111 23467776643
Q ss_pred -HHHHHHHHHHHHHhCCCCeEEEeccccc----------cccc----hHHH-HHHHHHHhCCCEEEEeCC----CCCCCC
Q 021163 148 -TVMNAIFLQATMESIGIPTRVQTAFRMS----------EVAE----PYIR-RRAVRHLEKGRVVIFAAG----TGNPFF 207 (316)
Q Consensus 148 -~~lna~Lv~~~L~~~Gi~a~~l~~~~~~----------~~~~----~~i~-~~l~~lL~~g~IPVv~g~----~g~~~~ 207 (316)
+.+|..|. ..|+++|++++++++.+.. ++.. ..++ +.+..+|++|.|||+++. .|..++
T Consensus 127 ~G~in~~l~-~~L~~~g~~a~gl~~~~a~~l~a~~~~~~d~g~~g~v~~v~~~~i~~lL~~g~IpVi~~v~~~~~G~~~~ 205 (321)
T 2v5h_A 127 VGRVNKDIV-SRINTTGGRAVGFCGTDGRLVLARPHDQEGIGFVGEVNSVNSEVIEPLLERGYIPVISSVAADENGQSFN 205 (321)
T ss_dssp HHTHHHHHH-HHHHHHTCCEEEECTTGGGSEEEEECSSCSSBSBEEEEEECGGGTHHHHHTTCEEEEESEEECTTSCEEE
T ss_pred hChHHHHHH-HHHHhCCCCeeeeChhhccEEEeecCCCccccccceeEEecHHHHHHHHHCCCeEEEeCceECCCCCEEE
Confidence 57887655 5899999999887655321 2211 1122 335679999999999963 333455
Q ss_pred -CchHHHHHHHHhcCCcEEEEecccCcccccCCCCCCCCceeccccHHHHhhC-------CCCCchHHHHHHHHhCCCc-
Q 021163 208 -TTDTAAALRCAEINAEVVLKATNVDGVYDDNPRRNPNARLLDTLTYQEVTSK-------DLSVMDMTAITLCQENNIP- 278 (316)
Q Consensus 208 -~sD~iAa~LA~~L~Ad~LiilTDVdGVyt~dP~~~p~aklI~~It~~e~~~l-------G~~v~k~~Aa~~a~~~gI~- 278 (316)
++|++|+++|.+|+||+|+|+|||||||++||+ ++++|++|+++|+.++ |.|.+|++|+..|.++|++
T Consensus 206 i~~D~~Aa~lA~~l~Ad~LiilTDVdGVy~~dp~---~a~~i~~is~~e~~~l~~~g~~~gGM~~Kl~Aa~~a~~~gv~~ 282 (321)
T 2v5h_A 206 INADTVAGEIAAALNAEKLILLTDTRGILEDPKR---PESLIPRLNIPQSRELIAQGIVGGGMIPKVDCCIRSLAQGVRA 282 (321)
T ss_dssp CCHHHHHHHHHHHTTCSEEEEEESSSSCBSSTTC---TTCBCCEEEHHHHHHHHHTTSSCTTHHHHHHHHHHHHHTTCSE
T ss_pred eCHHHHHHHHHHHcCCCEEEEeeCCCceEcCCCC---CCeeeeEEcHHHHHHHHhCCCCcCcHHHHHHHHHHHHHcCCCE
Confidence 999999999999999999999999999999997 5899999999988764 2345589999999999998
Q ss_pred EEEEeCCCcchH-HHHhcCCCcceEEecCC
Q 021163 279 VVVFNLNQPGNI-AKAIQGERVGTLIGGTW 307 (316)
Q Consensus 279 v~I~ng~~p~~i-~~~l~G~~~GT~I~~~~ 307 (316)
++|+|++.|+.+ .++++|+..||+|.++.
T Consensus 283 v~I~~g~~~~~ll~~l~~~~~~GT~I~~~~ 312 (321)
T 2v5h_A 283 AHIIDGRIPHALLLEIFTDAGIGTMIVGSG 312 (321)
T ss_dssp EEEEETTSTTHHHHHHHCCCCSEEEEECC-
T ss_pred EEEEeCCCCchHHHHHhcCCCCceEEECCc
Confidence 999999999998 78999988999998754
No 21
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=99.97 E-value=5.9e-30 Score=251.81 Aligned_cols=207 Identities=23% Similarity=0.310 Sum_probs=156.4
Q ss_pred CCeEEEEECccccccCCCC-C----------CCCCeEEEEC-hhHHHHHHH-Hccc--CCCCccHHHHHHHHHHHHHHHH
Q 021163 90 WQRVLLKVSGEALAGDHTQ-N----------IDPKVAIVVG-GGNIFRGAS-AAGN--SGLDRSSADYIGMLATVMNAIF 154 (316)
Q Consensus 90 ~k~iVIKiGGS~i~~~~~~-~----------~~~~vVIVhG-GG~~a~G~~-~l~~--~gl~~~~~d~v~~la~~lna~L 154 (316)
++++|+|+||+++.+.+.. . ...++||||| +|.+.+... ..+. ...+....|.+.+.++.+|..+
T Consensus 1 m~~iViK~GGssl~~~~~i~~v~~~i~~l~~~g~~~vvV~sa~g~~~~~ll~~~~~~~~~~~~~~~d~~~a~Ge~~~~~l 80 (421)
T 3ab4_A 1 MALVVQKYGGSSLESAERIRNVAERIVATKKAGNDVVVVCSAMGDTTDELLELAAAVNPVPPAREMDMLLTAGERISNAL 80 (421)
T ss_dssp -CEEEEEECSGGGSSHHHHHHHHHHHHHHHHTTCEEEEEECCSTTHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEChhHhCCHHHHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhhhhccCCCHHHHHHHHHHHHHHHHHH
Confidence 3689999999999874311 1 1246788896 677755442 2211 2234455677777888999998
Q ss_pred HHHHHHhCCCCeEEEecccccccc-chH-------HH-HHHHHHHhCCCEEEEeCCC------CC----CCCCchHHHHH
Q 021163 155 LQATMESIGIPTRVQTAFRMSEVA-EPY-------IR-RRAVRHLEKGRVVIFAAGT------GN----PFFTTDTAAAL 215 (316)
Q Consensus 155 v~~~L~~~Gi~a~~l~~~~~~~~~-~~~-------i~-~~l~~lL~~g~IPVv~g~~------g~----~~~~sD~iAa~ 215 (316)
++++|+++|+++.++++.+...+. +++ ++ ..+..+|+.|.|||++|+. |. .++++|++|++
T Consensus 81 l~~~L~~~G~~a~~l~~~~~~~~t~~~~~~~~v~~~~~~~i~~~l~~g~ipVv~g~~g~~~~~g~~~tlgrg~sD~~Aa~ 160 (421)
T 3ab4_A 81 VAMAIESLGAEAQSFTGSQAGVLTTERHGNARIVDVTPGRVREALDEGKICIVAGFQGVNKETRDVTTLGRGGSDTTAVA 160 (421)
T ss_dssp HHHHHHHTTCCEEECCCC-----------------CCHHHHHHHHHTTCEEEC------------------CCHHHHHHH
T ss_pred HHHHHHHCCCCeEEEehhhceEEeccCCCCeeechhhHHHHHHHHhCCCEEEEeCCcCcCCCCCceEEeCCCCHHHHHHH
Confidence 989999999999887766542211 111 11 3466789999999998862 21 34589999999
Q ss_pred HHHhcCCcEEEEecccCcccccCCCCCCCCceeccccHHHHhhC---CCCCchHHHHHHHHhCCCcEEEEeCCCcchHHH
Q 021163 216 RCAEINAEVVLKATNVDGVYDDNPRRNPNARLLDTLTYQEVTSK---DLSVMDMTAITLCQENNIPVVVFNLNQPGNIAK 292 (316)
Q Consensus 216 LA~~L~Ad~LiilTDVdGVyt~dP~~~p~aklI~~It~~e~~~l---G~~v~k~~Aa~~a~~~gI~v~I~ng~~p~~i~~ 292 (316)
+|.+|+|+++++||||||||++||+.+|++++|++|+|+|+.++ |.+++|++|+++|.++|||++|.|+++|
T Consensus 161 lA~~l~Ad~l~i~TDVdGv~~~dPr~~~~a~~i~~is~~e~~el~~~Ga~v~~~~a~~~a~~~gi~v~I~n~~~~----- 235 (421)
T 3ab4_A 161 LAAALNADVCEIYSDVDGVYTADPRIVPNAQKLEKLSFEEMLELAAVGSKILVLRSVEYARAFNVPLRVRSSYSN----- 235 (421)
T ss_dssp HHHHHTCSEEEEEESCCSCBSSCTTTSTTCCBCSEECHHHHHHHHHTTCCSSCHHHHHHHHHTTCCEEEEESSSC-----
T ss_pred HHHHCCCCEEEEEECCCccCcCCCCCCCCCeEccccCHHHHHHHHhcCCcCchHHHHHHHHHcCCCEEEecCcCC-----
Confidence 99999999999999999999999999999999999999998875 8899999999999999999999999987
Q ss_pred HhcCCCcceEEecC
Q 021163 293 AIQGERVGTLIGGT 306 (316)
Q Consensus 293 ~l~G~~~GT~I~~~ 306 (316)
..||+|.++
T Consensus 236 -----~~GT~I~~~ 244 (421)
T 3ab4_A 236 -----DPGTLIAGS 244 (421)
T ss_dssp -----CCCEEECSC
T ss_pred -----CCCeEEEec
Confidence 479999875
No 22
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=99.97 E-value=4.3e-30 Score=262.98 Aligned_cols=209 Identities=22% Similarity=0.243 Sum_probs=165.9
Q ss_pred CCeEEEEECccccccCCCC-C----------CCCCeEEEECh-hHHHHHHHH-ccc--CCCCccHHHHHHHHHHHHHHHH
Q 021163 90 WQRVLLKVSGEALAGDHTQ-N----------IDPKVAIVVGG-GNIFRGASA-AGN--SGLDRSSADYIGMLATVMNAIF 154 (316)
Q Consensus 90 ~k~iVIKiGGS~i~~~~~~-~----------~~~~vVIVhGG-G~~a~G~~~-l~~--~gl~~~~~d~v~~la~~lna~L 154 (316)
++++|+|+||+.+.+.+.. . -..++|||||| |...+++.. .+. ...+....|.+...++.+|+.+
T Consensus 1 m~~iViK~GGssl~~~~~i~~va~~i~~~~~~g~~vvvV~sa~G~~t~~ll~~~~~~~~~~~~~~~d~l~s~Ge~~s~~l 80 (600)
T 3l76_A 1 MALIVQKFGGTSVGTVERIQAVAQRIKRTVQGGNSLVVVVSAMGKSTDVLVDLAQQISPNPCRREMDMLLSTGEQVSIAL 80 (600)
T ss_dssp -CEEEEEECSGGGSSHHHHHHHHHHHHHHHHTTCEEEEEECCSSTHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCcEEEEECCCcHHHHHHHHHHHhhccCCCHHHHHHHHHHhHHHHHHH
Confidence 3689999999999876421 1 12478999999 888777532 211 1223344566667788999999
Q ss_pred HHHHHHhCCCCeEEEeccccccccchH--------HH-HHHHHHHhCCCEEEEeCCC-----C------CCCCCchHHHH
Q 021163 155 LQATMESIGIPTRVQTAFRMSEVAEPY--------IR-RRAVRHLEKGRVVIFAAGT-----G------NPFFTTDTAAA 214 (316)
Q Consensus 155 v~~~L~~~Gi~a~~l~~~~~~~~~~~~--------i~-~~l~~lL~~g~IPVv~g~~-----g------~~~~~sD~iAa 214 (316)
++.+|+++|++++++++.+...+.+.+ ++ ..+..+|+.|.|||++|+. | ..+++||++|+
T Consensus 81 ~~~~l~~~G~~a~~l~~~~~~l~~~~~~~~~~~~~~~~~~i~~ll~~g~IpVv~Gf~g~~~~g~~~~~tlgrGgsD~~Aa 160 (600)
T 3l76_A 81 LSLALQEIDQPAISLTGAQVGIVTEAEHSRARILEIRPDRLEHHLREGKVVVVAGFQGISSVEHLEITTLGRGGSDTSAV 160 (600)
T ss_dssp HHHHHHHTTCCEEEEEGGGTEEEEC-------CCEEEECCHHHHHTTTCEEEEECEEEC----CEEEECCCTTHHHHHHH
T ss_pred HHHHHHhCCCCeEEechhHcceEEecCCCCceeccccHHHHHHHHhCCCEEEEECCeecCCCCCEEEecCCCCChHHHHH
Confidence 999999999999998877653322211 11 3367789999999998752 2 24677999999
Q ss_pred HHHHhcCCcEEEEecccCcccccCCCCCCCCceeccccHHHHhhC---CCCCchHHHHHHHHhCCCcEEEEeCCCcchHH
Q 021163 215 LRCAEINAEVVLKATNVDGVYDDNPRRNPNARLLDTLTYQEVTSK---DLSVMDMTAITLCQENNIPVVVFNLNQPGNIA 291 (316)
Q Consensus 215 ~LA~~L~Ad~LiilTDVdGVyt~dP~~~p~aklI~~It~~e~~~l---G~~v~k~~Aa~~a~~~gI~v~I~ng~~p~~i~ 291 (316)
++|.+|+|+++++||||||||++||+.+|++++|++++|+|+.++ |+++|+++|+++|.++|||++|+|++++
T Consensus 161 ~lA~~l~Ad~l~i~TDVdGv~~~dPr~~~~a~~i~~is~~e~~ela~~G~~vm~p~a~~~a~~~gipv~I~n~~~~---- 236 (600)
T 3l76_A 161 ALAAALKADFCEIYTDVPGILTTDPRLVPEAQLMAEITCDEMLELASLGAKVLHPRAVEIARNYGIPLVVRSSWSD---- 236 (600)
T ss_dssp HHHHHHTCSEEEEEESSSSCBSSCTTTCTTCCBCSEEEHHHHHHTGGGGTTTCCHHHHHHHHHHTCCEEEEETTCC----
T ss_pred HHHHHcCCCEEEEEECCCcCCCCCCCCCCCCeEeeEEcHHHHHHHHhCCCCccHHHHHHHHHHCCCeEEEEECCCC----
Confidence 999999999999999999999999999999999999999999885 8899999999999999999999999874
Q ss_pred HHhcCCCcceEEecCCC
Q 021163 292 KAIQGERVGTLIGGTWN 308 (316)
Q Consensus 292 ~~l~G~~~GT~I~~~~~ 308 (316)
..||+|.+...
T Consensus 237 ------~~GT~I~~~~~ 247 (600)
T 3l76_A 237 ------EPGTKVVAPPV 247 (600)
T ss_dssp ------SCCEEEECCCC
T ss_pred ------CCCeEEecCCc
Confidence 47999987543
No 23
>2bty_A Acetylglutamate kinase; N-acetyl-L-glutamate kinase, amino acid kinase, phosphoryl group transfer, arginine metabolism, transferase; HET: ARG NLG; 2.75A {Thermotoga maritima} SCOP: c.73.1.2
Probab=99.96 E-value=5.8e-30 Score=239.12 Aligned_cols=210 Identities=20% Similarity=0.238 Sum_probs=159.2
Q ss_pred CCCeEEEEECccccccCCCC-C----------CCCCeEEEEChhHHHHHH-HHccc-----CCCC---ccHHHHHHHHH-
Q 021163 89 KWQRVLLKVSGEALAGDHTQ-N----------IDPKVAIVVGGGNIFRGA-SAAGN-----SGLD---RSSADYIGMLA- 147 (316)
Q Consensus 89 ~~k~iVIKiGGS~i~~~~~~-~----------~~~~vVIVhGGG~~a~G~-~~l~~-----~gl~---~~~~d~v~~la- 147 (316)
+.+++|||+||+++++++.. . ...++|||||||+++... ..++. .+++ +..++.+++++
T Consensus 20 ~~~~iViKlGGs~l~~~~~~~~~~~~i~~l~~~G~~vVlVhGgG~~i~~~~~~~~~~~~~~~g~r~t~~~~l~~~~~~~~ 99 (282)
T 2bty_A 20 YGKTFVIKFGGSAMKQENAKKAFIQDIILLKYTGIKPIIVHGGGPAISQMMKDLGIEPVFKNGHRVTDEKTMEIVEMVLV 99 (282)
T ss_dssp TTCEEEEEECSHHHHSHHHHHHHHHHHHHHHHTTCEEEEEECCSHHHHHHHHHHTCCCCBSSSSBCBCHHHHHHHHHHHH
T ss_pred cCCeEEEEECchhhCChhHHHHHHHHHHHHHHCCCcEEEEECCcHHHHHHHHHcCCCccccCCcccCCHHHHHHHHHHHh
Confidence 46899999999999875311 1 134789999999998543 23321 1221 33466666643
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEeccccc-----------cccc----hHHH-HHHHHHHhCCCEEEEeCC----CCCCC-
Q 021163 148 TVMNAIFLQATMESIGIPTRVQTAFRMS-----------EVAE----PYIR-RRAVRHLEKGRVVIFAAG----TGNPF- 206 (316)
Q Consensus 148 ~~lna~Lv~~~L~~~Gi~a~~l~~~~~~-----------~~~~----~~i~-~~l~~lL~~g~IPVv~g~----~g~~~- 206 (316)
+.+|.. +++.|+++|++++++++.+.. ++.. .+++ ..+..+|++|.|||+++. .|..+
T Consensus 100 G~~~~~-l~~~l~~~g~~a~~l~~~~~~~l~~~~~~~~~d~g~~g~v~~~~~~~i~~ll~~g~IpVi~~v~~~~~G~~~~ 178 (282)
T 2bty_A 100 GKINKE-IVMNLNLHGGRAVGICGKDSKLIVAEKETKHGDIGYVGKVKKVNPEILHALIENDYIPVIAPVGIGEDGHSYN 178 (282)
T ss_dssp HTHHHH-HHHHHHTTTCCEEEEETTGGGSEEEEECCTTCCCBSBEEEEEECTHHHHHHHHTTCEEEEESEEECSSSCEEE
T ss_pred hHHHHH-HHHHHHhCCCCceecChhhCCEEEEecCCcccCCCcceEEEEecHHHHHHHHHCCCEEEECCCccCCCCCEEE
Confidence 466765 456999999999987765431 1110 1233 346789999999999984 23334
Q ss_pred CCchHHHHHHHHhcCCcEEEEecccCcccccCCCCCCCCceeccccHHHHhhC-------CCCCchHHHHHHHHhCCCc-
Q 021163 207 FTTDTAAALRCAEINAEVVLKATNVDGVYDDNPRRNPNARLLDTLTYQEVTSK-------DLSVMDMTAITLCQENNIP- 278 (316)
Q Consensus 207 ~~sD~iAa~LA~~L~Ad~LiilTDVdGVyt~dP~~~p~aklI~~It~~e~~~l-------G~~v~k~~Aa~~a~~~gI~- 278 (316)
.++|++|+++|.+|+||+|++||||||||++ | ++|++++++|+.++ |.|.+|++|+..|.++|++
T Consensus 179 ~~~D~~Aa~lA~~l~Ad~liilTDVdGvy~~-----~--~~i~~i~~~e~~~~~~~g~~~gGM~~K~~aa~~a~~~gv~~ 251 (282)
T 2bty_A 179 INADTAAAEIAKSLMAEKLILLTDVDGVLKD-----G--KLISTLTPDEAEELIRDGTVTGGMIPKVECAVSAVRGGVGA 251 (282)
T ss_dssp CCHHHHHHHHHHHHTCSEEEEEESSSSCEET-----T--EECCEECHHHHHHHHTTTCSCTTHHHHHHHHHHHHHTTCSC
T ss_pred ECHHHHHHHHHHHcCCCEEEEEeCCCCeecC-----c--hhhhhCCHHHHHHHHHcCCCCCcHHHHHHHHHHHHHhCCCe
Confidence 4999999999999999999999999999996 2 89999999998764 2366699999999999998
Q ss_pred EEEEeCCCcchH-HHHhcCCCcceEEecC
Q 021163 279 VVVFNLNQPGNI-AKAIQGERVGTLIGGT 306 (316)
Q Consensus 279 v~I~ng~~p~~i-~~~l~G~~~GT~I~~~ 306 (316)
++|+|++.|+.+ .++++|+..||+|.++
T Consensus 252 v~I~~g~~~~~ll~~~~~~~~~GT~i~~~ 280 (282)
T 2bty_A 252 VHIINGGLEHAILLEIFSRKGIGTMIKEL 280 (282)
T ss_dssp EEEEETTSTTHHHHHHSSSSCSSEEECCC
T ss_pred EEEecCCCCchHHHHHhcCCCCceEEEeC
Confidence 999999999998 7889998899999865
No 24
>3d40_A FOMA protein; fosfomycin, antibiotic resistance, kinase, phosphoryl transfer, transferase; 1.53A {Streptomyces wedmorensis} PDB: 3d41_A* 3qun_A* 3quo_A* 3qur_A* 3qvf_A* 3qvh_A*
Probab=99.96 E-value=1.7e-30 Score=243.83 Aligned_cols=211 Identities=14% Similarity=0.172 Sum_probs=145.5
Q ss_pred CCeEEEEECccccccCCC-CCC------------------CC-CeEEEEChhHHHHHHHHcccCCCCccHH-HHHHHHHH
Q 021163 90 WQRVLLKVSGEALAGDHT-QNI------------------DP-KVAIVVGGGNIFRGASAAGNSGLDRSSA-DYIGMLAT 148 (316)
Q Consensus 90 ~k~iVIKiGGS~i~~~~~-~~~------------------~~-~vVIVhGGG~~a~G~~~l~~~gl~~~~~-d~v~~la~ 148 (316)
.+++|||+||+++++++. ..+ .. ++|||||||++++.+ +++++++.... ....+--.
T Consensus 23 ~~~iVIKlGGs~l~~~~~~~~~~~~~l~~la~~Ia~l~~~G~~~vViVhGgG~~~~~~--l~~~~~~~~~~~~~~~vt~g 100 (286)
T 3d40_A 23 PDFLAIKVGGSLFSRKDEPGSLDDDAVTRFARNFARLAETYRGRMVLISGGGAFGHGA--IRDHDSTHAFSLAGLTEATF 100 (286)
T ss_dssp CSEEEEEECGGGTBCTTSTTCBCHHHHHHHHHHHHHHHHHTTTSEEEEECCCCC--------------CCTTHHHHHHHH
T ss_pred CCEEEEEeCchHhCCCcccccchHHHHHHHHHHHHHHHHcCCCeEEEEECCHHHHHHH--HHHcCCCcccchhcchhhHH
Confidence 458999999999998741 111 12 589999999996554 33334443322 11111113
Q ss_pred HHHHHHHHHHHHhCCCCeEEEeccccccc---cchHHHHHHHHHHhCCCEEEEeCC----CCC--CCCCchHHHHHHHHh
Q 021163 149 VMNAIFLQATMESIGIPTRVQTAFRMSEV---AEPYIRRRAVRHLEKGRVVIFAAG----TGN--PFFTTDTAAALRCAE 219 (316)
Q Consensus 149 ~lna~Lv~~~L~~~Gi~a~~l~~~~~~~~---~~~~i~~~l~~lL~~g~IPVv~g~----~g~--~~~~sD~iAa~LA~~ 219 (316)
.+|.. +..+|+++|+++..+.+.+.... ........+..+|++|.|||++|+ .+. +++++|++|+++|.+
T Consensus 101 ~l~~~-l~~~l~~~G~~a~~l~~~~~~~t~dg~~~~~~~~i~~lL~~g~IpVi~gd~~~~~~g~~~~~~~D~~Aa~lA~~ 179 (286)
T 3d40_A 101 EVKKR-WAEKLRGIGVDAFPLQLAAMCTLRNGIPQLRSEVLRDVLDHGALPVLAGDALFDEHGKLWAFSSDRVPEVLLPM 179 (286)
T ss_dssp HHHHH-HHHHHHHTTCCEEECCGGGTEEEETTEEEECCSHHHHHHHTTCEEEEECEEEEBTTSCEEEECGGGHHHHTTTT
T ss_pred HHHHH-HHHHHHHcCCcEEEEEeecCCcccCCeEEehHHHHHHHHHCcCEEEEcCCeEEcCCCCEEeeCHHHHHHHHHHh
Confidence 45544 45689999999986655332100 000001246779999999999983 122 568999999999999
Q ss_pred -cCCcEEEEecccCcccccCCCCCCCCceeccccHHHHhhC-------------CCCCchHHHHHHHHhCCCcEEEEeCC
Q 021163 220 -INAEVVLKATNVDGVYDDNPRRNPNARLLDTLTYQEVTSK-------------DLSVMDMTAITLCQENNIPVVVFNLN 285 (316)
Q Consensus 220 -L~Ad~LiilTDVdGVyt~dP~~~p~aklI~~It~~e~~~l-------------G~~v~k~~Aa~~a~~~gI~v~I~ng~ 285 (316)
|+|++|+|+|||||||++||+ ++++|++|++.|++++ |.|..|++|+..|.++|++++|+|++
T Consensus 180 ~l~Ad~LiilTDVdGVy~~dP~---~a~~i~~is~~e~~~l~~~~~~~~~~~~tggM~~Kl~Aa~~a~~~gv~v~I~~g~ 256 (286)
T 3d40_A 180 VEGRLRVVTLTDVDGIVTDGAG---GDTILPEVDARSPEQAYAALWGSSEWDATGAMHTKLDALVTCARRGAECFIMRGD 256 (286)
T ss_dssp CCSCEEEEEEESSSSCEECC------CEECCEEETTSCHHHHHHHHHSCC----CHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred hCCCCEEEEecCCCeeEcCCCC---CCcCCcccCHHHHHHHHHhhccccCCcccCcHHHHHHHHHHHHHCCCcEEEEeCC
Confidence 999999999999999999998 7999999998753221 33455899999999999999999999
Q ss_pred CcchHHHHhcC-----CCc-ceEEecC
Q 021163 286 QPGNIAKAIQG-----ERV-GTLIGGT 306 (316)
Q Consensus 286 ~p~~i~~~l~G-----~~~-GT~I~~~ 306 (316)
+|+++.+++++ +++ ||.|..+
T Consensus 257 ~p~~l~~l~t~~~~~~~~~~~t~i~~~ 283 (286)
T 3d40_A 257 PGSDLEFLTAPFSSWPAHVRSTRITTT 283 (286)
T ss_dssp TTCCCGGGGSCGGGSCTTCCCEEEEC-
T ss_pred CCCcHHHHhcCcccCcccccceeeeec
Confidence 99999999999 776 9999764
No 25
>3k4o_A Isopentenyl phosphate kinase; small molecule kinase, ATP-binding, transferase, methanocald jannaschii, isopentenyl monophosphate; 2.05A {Methanocaldococcus jannaschii} PDB: 3k4y_A* 3k52_A* 3k56_A*
Probab=99.96 E-value=3.4e-30 Score=239.64 Aligned_cols=203 Identities=23% Similarity=0.250 Sum_probs=149.2
Q ss_pred CeEEEEECccccccCCC-CCC----------------C--------CCeEEEEChhHHHHHHHHcccCCCCcc---HHHH
Q 021163 91 QRVLLKVSGEALAGDHT-QNI----------------D--------PKVAIVVGGGNIFRGASAAGNSGLDRS---SADY 142 (316)
Q Consensus 91 k~iVIKiGGS~i~~~~~-~~~----------------~--------~~vVIVhGGG~~a~G~~~l~~~gl~~~---~~d~ 142 (316)
.++|||+||+++++++. ..+ . .++|||||||+++.++ ++++|+++. ..+.
T Consensus 7 m~iVIKlGGs~l~~~~~~~~~~~~~l~~la~~i~~l~~~G~~~~~~~~vVlVhGGG~~~~~~--~~~lgi~~~~~~~~~~ 84 (266)
T 3k4o_A 7 MLTILKLGGSILSDKNVPYSIKWDNLERIAMEIKNALDYYKNQNKEIKLILVHGGGAFGHPV--AKKYLKIEDGKKIFIN 84 (266)
T ss_dssp CEEEEEECTTSSCCTTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEECCHHHHHHH--HGGGEEECSSSEEECC
T ss_pred eEEEEEEchHHeeCCCccCCcCHHHHHHHHHHHHHHHhccccccCCCCEEEEeCchHHHHHH--HHHcCCCcccCccccc
Confidence 36999999999998641 111 1 4689999999996553 444455544 1111
Q ss_pred --HHHHHH-----HHHHHHHHHHHHhCCCCeEEEeccccccccc-hHHH-HHHHHHHhCCCEEEEeCC----C--CCCCC
Q 021163 143 --IGMLAT-----VMNAIFLQATMESIGIPTRVQTAFRMSEVAE-PYIR-RRAVRHLEKGRVVIFAAG----T--GNPFF 207 (316)
Q Consensus 143 --v~~la~-----~lna~Lv~~~L~~~Gi~a~~l~~~~~~~~~~-~~i~-~~l~~lL~~g~IPVv~g~----~--g~~~~ 207 (316)
.++..+ .+|+.+ .++|+++|+++.++++.+...... .+++ ..+..+|++|+|||++++ . +.+++
T Consensus 85 ~~~G~r~T~~a~~~ln~~l-~~~l~~~G~~a~~l~~~d~~~~~~g~~v~~~~i~~lL~~g~ipVi~~~~~~~~~g~~~~~ 163 (266)
T 3k4o_A 85 MEKGFWEIQRAMRRFNNII-IDTLQSYDIPAVSIQPSSFVVFGDKLIFDTSAIKEMLKRNLVPVIHGDIVIDDKNGYRII 163 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHHHTTTCCEEEECGGGTCEESSSCBCCCHHHHHHHHTTCEEEEECEEEEESSSCEEEE
T ss_pred ccCceeHHHHHHHHHHHHH-HHHHHHCCCcEEEeeHHHcCcccCceEecHHHHHHHHHCCCEEEEeCCEEEcCCCCeeee
Confidence 333333 388875 469999999999888766532220 1222 446789999999999973 1 24578
Q ss_pred CchHHHHHHHHhcCCcEEEEecccCcccccCCCCCCCCceeccccHH---HHhhC----------CCCCchHHHHHHHHh
Q 021163 208 TTDTAAALRCAEINAEVVLKATNVDGVYDDNPRRNPNARLLDTLTYQ---EVTSK----------DLSVMDMTAITLCQE 274 (316)
Q Consensus 208 ~sD~iAa~LA~~L~Ad~LiilTDVdGVyt~dP~~~p~aklI~~It~~---e~~~l----------G~~v~k~~Aa~~a~~ 274 (316)
++|++|+++|.+|+|++|+++||||||| +||+. +++++.. ++.+. |.|..|++++..|.+
T Consensus 164 ~~D~~Aa~lA~~l~Ad~li~ltdvdGv~-~d~~~------i~~~~~~e~~~l~~~~~~~~~~~~tGGM~~Kv~aa~~a~~ 236 (266)
T 3k4o_A 164 SGDDIVPYLANELKADLILYATDVDGVL-IDNKP------IKRIDKNNIYKILNYLSGSNSIDVTGGMKYKIEMIRKNKC 236 (266)
T ss_dssp CHHHHHHHHHHHHTCSEEEEEESSSSSB-SSSSB------CSEECTTTHHHHHHHHHSTTCSCCSSHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHcCCCEEEEEecCCeEE-eCCee------cCcCCHHHHHHHHHHhccccCCcccCCHHHHHHHHHHHhc
Confidence 9999999999999999999999999999 78754 4444432 22211 335679999988877
Q ss_pred CCCcEEEEeCCCcchHHHHhcCCCcceEEecC
Q 021163 275 NNIPVVVFNLNQPGNIAKAIQGERVGTLIGGT 306 (316)
Q Consensus 275 ~gI~v~I~ng~~p~~i~~~l~G~~~GT~I~~~ 306 (316)
+++|+|+++|+.|.++++|+.+||+|.+.
T Consensus 237 ---~v~I~~g~~~~~l~~~l~g~~~GT~i~~~ 265 (266)
T 3k4o_A 237 ---RGFVFNGNKANNIYKALLGEVEGTEIDFS 265 (266)
T ss_dssp ---EEEEEETTSTTHHHHHHTTCCCSEEEECC
T ss_pred ---CEEEEeCCCccHHHHHhCCCCCceEEEeC
Confidence 99999999999999999999999999875
No 26
>2buf_A Acetylglutamate kinase; acetyglutamate kinase, ADP, arginine biosynthesis, FEED-BACK inhibition, hexamer, transferase; HET: NLG ADP; 2.95A {Pseudomonas aeruginosa} SCOP: c.73.1.2
Probab=99.96 E-value=4e-29 Score=235.84 Aligned_cols=212 Identities=15% Similarity=0.220 Sum_probs=158.9
Q ss_pred CCCeEEEEECccccccCCCC-C----------CCCCeEEEEChhHHHHHH-HHccc-----CCCC---ccHHHHHHHHH-
Q 021163 89 KWQRVLLKVSGEALAGDHTQ-N----------IDPKVAIVVGGGNIFRGA-SAAGN-----SGLD---RSSADYIGMLA- 147 (316)
Q Consensus 89 ~~k~iVIKiGGS~i~~~~~~-~----------~~~~vVIVhGGG~~a~G~-~~l~~-----~gl~---~~~~d~v~~la- 147 (316)
+++++|||+||+++++++.. . ...++|||||||+++... ..++. .|++ +..++.+++++
T Consensus 25 ~~k~iVIKlGGs~l~~~~~~~~~~~~i~~l~~~G~~vVlVhGgG~~i~~~~~~~g~~~~~~~g~rvt~~~~l~~~~~~~~ 104 (300)
T 2buf_A 25 VGKTLVIKYGGNAMESEELKAGFARDVVLMKAVGINPVVVHGGGPQIGDLLKRLSIESHFIDGMRVTDAATMDVVEMVLG 104 (300)
T ss_dssp TTCEEEEEECCTTTTSSHHHHHHHHHHHHHHHTTCEEEEEECCCHHHHHHHHHTTCCCCBSSSSBCBCHHHHHHHHHHHH
T ss_pred cCCeEEEEECchhhCCchHHHHHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHcCCCccccCCeecCCHHHHHHHHHHHH
Confidence 56899999999999986421 1 134789999999997533 23321 1221 23467666654
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEeccccc----------------------cccc----hHHH-HHHHHHHhCCCEEEEeC
Q 021163 148 TVMNAIFLQATMESIGIPTRVQTAFRMS----------------------EVAE----PYIR-RRAVRHLEKGRVVIFAA 200 (316)
Q Consensus 148 ~~lna~Lv~~~L~~~Gi~a~~l~~~~~~----------------------~~~~----~~i~-~~l~~lL~~g~IPVv~g 200 (316)
+.+|..+. +.|+++|++++.+++.+.. ++.. .+++ ..+..+|++|.|||+++
T Consensus 105 G~~~~~l~-~~l~~~g~~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~g~~g~v~~v~~~~i~~lL~~g~IpVi~~ 183 (300)
T 2buf_A 105 GQVNKDIV-NLINRHGGSAIGLTGKDAELIRAKKLTVTRQTPEMTKPEIIDIGHVGEVTGVNVGLLNMLVKGDFIPVIAP 183 (300)
T ss_dssp HTHHHHHH-HHHHHTTCCEEEEEETGGGCEEEEECCCCCC--------CCCCBSBEEEEEECHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHH-HHHHhCCCCEEEecCCCCCeeeeeeccccccchhhcccccccCCcceeEEEECHHHHHHHHHCCCEEEEcC
Confidence 46665544 6899999998877654321 1110 1233 33567999999999996
Q ss_pred C----CCCCCC-CchHHHHHHHHhcCCcEEEEecccCcccccCCCCCCCCceeccccHHHHhhC-------CCCCchHHH
Q 021163 201 G----TGNPFF-TTDTAAALRCAEINAEVVLKATNVDGVYDDNPRRNPNARLLDTLTYQEVTSK-------DLSVMDMTA 268 (316)
Q Consensus 201 ~----~g~~~~-~sD~iAa~LA~~L~Ad~LiilTDVdGVyt~dP~~~p~aklI~~It~~e~~~l-------G~~v~k~~A 268 (316)
. .|..++ ++|++|+++|.+|+|++|+++|||||||++ ++++|+++++.|+.++ |.|.+|++|
T Consensus 184 v~~~~~G~~~~i~~D~~Aa~lA~~l~Ad~li~lTdVdGv~~~------~a~~i~~i~~~e~~~~~~~~~~~ggM~~Kv~a 257 (300)
T 2buf_A 184 IGVGSNGESYNINADLVAGKVAEALKAEKLMLLTNIAGLMDK------QGQVLTGLSTEQVNELIADGTIYGGMLPKIRC 257 (300)
T ss_dssp EEECTTSCEEECCHHHHHHHHHHHHTCSEEEEEESSSCCBCT------TSCBCCEECHHHHHHHHHTTCSCTTHHHHHHH
T ss_pred ceeCCCCCEEEECHHHHHHHHHHHcCCCEEEEEeCCCCeECC------CCcChhhCCHHHHHHHHHcCCCCCccHHHHHH
Confidence 3 333444 999999999999999999999999999986 3799999999998764 234558899
Q ss_pred HHHHHhCCCc-EEEEeCCCcchH-HHHhcCCCcceEEecCC
Q 021163 269 ITLCQENNIP-VVVFNLNQPGNI-AKAIQGERVGTLIGGTW 307 (316)
Q Consensus 269 a~~a~~~gI~-v~I~ng~~p~~i-~~~l~G~~~GT~I~~~~ 307 (316)
+..|.++|++ ++|+|++.|+.+ .++++|+..||+|.++.
T Consensus 258 a~~a~~~gv~~v~I~~g~~~~~ll~~~~~~~~~GT~i~~~~ 298 (300)
T 2buf_A 258 ALEAVQGGVTSAHIIDGRVPNAVLLEIFTDSGVGTLISNRK 298 (300)
T ss_dssp HHHHHHTTCSEEEEEETTSTTHHHHHHSSTTCCSEEEECCC
T ss_pred HHHHHHhCCCEEEEeeCCCCchHHHHHhcCCCCceEEEeCC
Confidence 9999999998 999999999988 78899888999998754
No 27
>2egx_A Putative acetylglutamate kinase; struc genomics, NPPSFA, national project on protein structural AN functional analyses; 1.92A {Thermus thermophilus} PDB: 3u6u_A
Probab=99.96 E-value=3.9e-29 Score=232.27 Aligned_cols=207 Identities=16% Similarity=0.175 Sum_probs=146.0
Q ss_pred eEEEEECccccccCCCC--C------CCCCeEEEEChhHHHHHH-HHcccC--------CC--Ccc---HHHHHHHH-HH
Q 021163 92 RVLLKVSGEALAGDHTQ--N------IDPKVAIVVGGGNIFRGA-SAAGNS--------GL--DRS---SADYIGML-AT 148 (316)
Q Consensus 92 ~iVIKiGGS~i~~~~~~--~------~~~~vVIVhGGG~~a~G~-~~l~~~--------gl--~~~---~~d~v~~l-a~ 148 (316)
++|||+||++++..... . ...++|||||||+++... ..++.. |+ +.. ..+.+.+. .+
T Consensus 1 ~iViKlGGs~l~~~~~~~~~i~~l~~~G~~vViVhGgg~~~~~~~~~~~~~~~~~~~~~g~~~rvt~~~~l~~~~~~~~G 80 (269)
T 2egx_A 1 MIVVKVGGAEGINYEAVAKDAASLWKEGVKLLLVHGGSAETNKVAEALGHPPRFLTHPGGQVSRLTDRKTLEIFEMVYCG 80 (269)
T ss_dssp CEEEEECCSTTCCHHHHHHHHHHHHHHTCCEEEECCCHHHHHHHHHHTTCCCCC-------CCCCCCHHHHHHHHHHHHT
T ss_pred CEEEEECHHHHHHHHHHHHHHHHHHHCCCeEEEEECChHHHHHHHHHcCCccccccccCCccCcCCCHHHHHHHHHHHHh
Confidence 48999999999711100 0 124789999999987432 232211 11 111 12333332 23
Q ss_pred HHHHHHHHHHHHhCCCCeEEEecccccccc------------------------c-hHHH-HHHHHHHhCCCEEEEeCC-
Q 021163 149 VMNAIFLQATMESIGIPTRVQTAFRMSEVA------------------------E-PYIR-RRAVRHLEKGRVVIFAAG- 201 (316)
Q Consensus 149 ~lna~Lv~~~L~~~Gi~a~~l~~~~~~~~~------------------------~-~~i~-~~l~~lL~~g~IPVv~g~- 201 (316)
.+|.. +.++|+++|+++..+++.+...+. + .+++ +.+..+|++|.|||+++.
T Consensus 81 ~i~~~-l~~~l~~~G~~a~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~D~g~~g~i~~v~~~~i~~ll~~g~ipVi~~v~ 159 (269)
T 2egx_A 81 LVNKR-LVELLQKEGANAIGLSGLDGRLFVGRRKTAVKYVENGKVKVHRGDYTGTVEEVNKALLDLLLQAGYLPVLTPPA 159 (269)
T ss_dssp HHHHH-HHHHHHHTTCCEEEEETTGGGCEEECBC----------------CCEECCCEECHHHHHHHHHTTCEEEEECCE
T ss_pred HHHHH-HHHHHHHCCCCeEEeCCCCccceeeeecccccccccccccCCcCCCCCCceEECHHHHHHHHHCCCEEEEcCcE
Confidence 45544 456899999999987775532110 0 1233 346778999999999963
Q ss_pred ---CC-CCCCCchHHHHHHHHhcCCcEEEEecccCcccccCCCCCCCCceeccccHHHHh--hC-----CCCCchHHHHH
Q 021163 202 ---TG-NPFFTTDTAAALRCAEINAEVVLKATNVDGVYDDNPRRNPNARLLDTLTYQEVT--SK-----DLSVMDMTAIT 270 (316)
Q Consensus 202 ---~g-~~~~~sD~iAa~LA~~L~Ad~LiilTDVdGVyt~dP~~~p~aklI~~It~~e~~--~l-----G~~v~k~~Aa~ 270 (316)
.| ..++++|++|+++|.+|+|++|+++|||||||+ || .|++++|++++++|+. ++ |.|..|++|+.
T Consensus 160 ~~~~g~~~~~~~D~~Aa~lA~~l~Ad~li~lTdVdGv~~-dp--~~~a~~i~~i~~~e~~~~~l~~~~~ggm~~Kl~aa~ 236 (269)
T 2egx_A 160 LSYENEAINTDGDQIAALLATLYGAEALVYLSNVPGLLA-RY--PDEASLVREIPVERIEDPEYLALAQGRMKRKVMGAV 236 (269)
T ss_dssp EETTSCEEEECHHHHHHHHHHHHTCSEEEEEESSSSCBC---------CBCCEECHHHHHCHHHHTTSCHHHHHHHHHHH
T ss_pred ECCCCCEEEeCHHHHHHHHHHHcCCCEEEEEeCchhhhc-CC--CCCccccccCCHHHhhHHHhcCCCCCchHHHHHHHH
Confidence 22 246899999999999999999999999999999 89 3789999999999998 64 23556889999
Q ss_pred HHHhCCC-cEEEEeCCCcchHHHHhcCCCcceEEe
Q 021163 271 LCQENNI-PVVVFNLNQPGNIAKAIQGERVGTLIG 304 (316)
Q Consensus 271 ~a~~~gI-~v~I~ng~~p~~i~~~l~G~~~GT~I~ 304 (316)
.|.++|+ +++|+|+++|+++.++++| .||+|.
T Consensus 237 ~a~~~gv~~v~I~~g~~~~~l~~~l~g--~GT~i~ 269 (269)
T 2egx_A 237 EAVKGGVKRVVFADGRVENPIRRALSG--EGTVVR 269 (269)
T ss_dssp HHHHTTCSCEEEEESSSSSHHHHHHTT--CSEEEC
T ss_pred HHHHcCCCeEEEEeCCCchHHHHHhCC--CCeEEC
Confidence 9999999 8999999999999999987 899984
No 28
>1gs5_A Acetylglutamate kinase; carbamate kinase, amino acid kinase, arginine biosynthesis, phosphoryl group transfer, protein crystallography; HET: NLG ANP; 1.5A {Escherichia coli} SCOP: c.73.1.2 PDB: 1gsj_A* 1oh9_A* 1oha_A* 1ohb_A* 2wxb_A 2x2w_A* 3t7b_A*
Probab=99.96 E-value=1.6e-29 Score=233.09 Aligned_cols=207 Identities=20% Similarity=0.234 Sum_probs=156.0
Q ss_pred CCeEEEEECccccccCCCC-C----C-------CCCeEEEEChhHHHHHHH-Hcc-----cCCCCccHHHHH----HHHH
Q 021163 90 WQRVLLKVSGEALAGDHTQ-N----I-------DPKVAIVVGGGNIFRGAS-AAG-----NSGLDRSSADYI----GMLA 147 (316)
Q Consensus 90 ~k~iVIKiGGS~i~~~~~~-~----~-------~~~vVIVhGGG~~a~G~~-~l~-----~~gl~~~~~d~v----~~la 147 (316)
++++|||+||+++++++.. . + .+++|||||||++++... .++ .++++....+.+ ++++
T Consensus 2 m~~~ViK~GGs~l~~~~~~~~~~~~i~~l~~~g~~~vVvV~Ggg~~~~~ll~~~g~~~~~~~glr~t~~~~l~~~~~~l~ 81 (258)
T 1gs5_A 2 MNPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALA 81 (258)
T ss_dssp CCCEEEEECGGGGGCHHHHHHHHHHHHHHHTTCCSCEEEEECCHHHHHHHHHHHTCCCCEETTEECBCHHHHHHHHHHHH
T ss_pred CccEEEEEChhHhCChHHHHHHHHHHHHHHHcCCCeEEEEeCCcHHHHHHHHHcCCCcceeCCEeeCCHHHHHHHHHHHh
Confidence 3579999999999875311 1 1 235899999999987653 222 134433333333 4578
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEeccccccc------------cc-hHHH-HHHHHHHhCCCEEEEeCC----CCC-CCCC
Q 021163 148 TVMNAIFLQATMESIGIPTRVQTAFRMSEV------------AE-PYIR-RRAVRHLEKGRVVIFAAG----TGN-PFFT 208 (316)
Q Consensus 148 ~~lna~Lv~~~L~~~Gi~a~~l~~~~~~~~------------~~-~~i~-~~l~~lL~~g~IPVv~g~----~g~-~~~~ 208 (316)
+.+|+.+++ .|+++|+++..+++.+...+ .+ ..++ ..+..+|++|.|||++|+ .|. .+++
T Consensus 82 ~~~n~~l~~-~l~~~G~~a~~l~~~~~~~~~~~~~~~d~~~~g~~~~~~~~~i~~ll~~g~ipVi~~~g~~~~g~~~~~~ 160 (258)
T 1gs5_A 82 GTANKTLLA-WAKKHQIAAVGLFLGDGDSVKVTQLDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVN 160 (258)
T ss_dssp THHHHHHHH-HHHHTTCCEEEECTTGGGCEEEEECCGGGBSBEEEEECCCHHHHHHHHTTCEEEECSEEECTTSCEEECC
T ss_pred ccchHHHHH-HHHHCCCCeEEEeecCCCEEEEEEcCCCCCCcCceeEECHHHHHHHHHCCCEEEEeCCcCCCCCcEEEec
Confidence 899999986 77999999998887664211 10 0111 346789999999999986 232 3678
Q ss_pred chHHHHHHHHhcCCcEEEEecccCcccccCCCCCCCCceeccccHHHHhhC-------CCCCchHHHHHHHH-hCCCcEE
Q 021163 209 TDTAAALRCAEINAEVVLKATNVDGVYDDNPRRNPNARLLDTLTYQEVTSK-------DLSVMDMTAITLCQ-ENNIPVV 280 (316)
Q Consensus 209 sD~iAa~LA~~L~Ad~LiilTDVdGVyt~dP~~~p~aklI~~It~~e~~~l-------G~~v~k~~Aa~~a~-~~gI~v~ 280 (316)
+|++|+++|.+|+|+ +++||||||||++| +++|++++++|+.++ |.|..|+.++..+. +.+++++
T Consensus 161 ~D~~Aa~lA~~l~Ad-li~ltdV~Gv~~~d------~~~i~~i~~~e~~~l~~~~~~~gGm~~k~~~a~~~~~~~~~~v~ 233 (258)
T 1gs5_A 161 ADQAATALAATLGAD-LILLSDVSGILDGK------GQRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARTLGRPVD 233 (258)
T ss_dssp HHHHHHHHHHHHTCE-EEEEESSSSCBCTT------SCBCCEECHHHHHHHHHTTCSCTHHHHHHHHHHHHHHHHTSCEE
T ss_pred HHHHHHHHHHHhCCc-EEEEeCCCceECCC------CCCCcccCHHHHHHHHhcCCCCCcHHHHHHHHHHHHHhCCCEEE
Confidence 999999999999999 99999999999975 689999999998764 22455777776654 5689999
Q ss_pred EEeCCCcchHHHHhcCCCcceEEe
Q 021163 281 VFNLNQPGNIAKAIQGERVGTLIG 304 (316)
Q Consensus 281 I~ng~~p~~i~~~l~G~~~GT~I~ 304 (316)
|+|+++|+.+.++++|+..||+|.
T Consensus 234 I~~~~~~~~l~~~~~~~~~GT~i~ 257 (258)
T 1gs5_A 234 IASWRHAEQLPALFNGMPMGTRIL 257 (258)
T ss_dssp EEESSCGGGHHHHHTTCCSSEEEC
T ss_pred EecCCCchHHHHHhcCCCCcEEEe
Confidence 999999999999999998999996
No 29
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=99.96 E-value=5.5e-28 Score=243.06 Aligned_cols=163 Identities=21% Similarity=0.266 Sum_probs=137.5
Q ss_pred CccHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeccccccc-----cc------hH--HHHHHHH-HHhCCCEEEEeCC
Q 021163 136 DRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEV-----AE------PY--IRRRAVR-HLEKGRVVIFAAG 201 (316)
Q Consensus 136 ~~~~~d~v~~la~~lna~Lv~~~L~~~Gi~a~~l~~~~~~~~-----~~------~~--i~~~l~~-lL~~g~IPVv~g~ 201 (316)
+++..|.+.++|+++|+.+++.+|+++|+++.++++.+.+.+ .+ .+ ++..+.+ +++.|.|||++||
T Consensus 136 ~~r~~d~l~s~GE~~s~~ll~~~L~~~Gi~A~~l~~~~~~l~t~~~~~~~~i~~~~~~~~~~~l~~~Ll~~g~IpVv~Gf 215 (510)
T 2cdq_A 136 TLRTRDYLVSFGECLSTRIFAAYLNTIGVKARQYDAFEIGFITTDDFTNGDILEATYPAVAKRLYDDWMHDPAVPIVTGF 215 (510)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECGGGTTCEECSCSTTCCBCTTHHHHHHHHHHHHHHHSCCEEEEESS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEhhHeeEEEecCCCccchhhHHHHHHHHHHHHHHHhCCcEEEEeCc
Confidence 345568888899999999999999999999999888775221 11 11 2344543 6789999999985
Q ss_pred C---C-------CCCCCchHHHHHHHHhcCCcEEEEecccCcccccCCCCCCCCceeccccHHHHhhC---CCCCchHHH
Q 021163 202 T---G-------NPFFTTDTAAALRCAEINAEVVLKATNVDGVYDDNPRRNPNARLLDTLTYQEVTSK---DLSVMDMTA 268 (316)
Q Consensus 202 ~---g-------~~~~~sD~iAa~LA~~L~Ad~LiilTDVdGVyt~dP~~~p~aklI~~It~~e~~~l---G~~v~k~~A 268 (316)
. + ..++++|++|+++|.+|+|+++++||||||||++||+.+|++++|++|+|+|+.++ |+++||++|
T Consensus 216 ~g~~~~~g~ittlgrGgsD~tAa~lA~~l~Ad~l~i~TDVdGVytaDPr~v~~A~~I~~Is~~E~~ela~~Ga~vmh~~a 295 (510)
T 2cdq_A 216 LGKGWKTGAVTTLGRGGSDLTATTIGKALGLKEIQVWKDVDGVLTCDPTIYKRATPVPYLTFDEAAELAYFGAQVLHPQS 295 (510)
T ss_dssp EEEETTTCCEEECCTTHHHHHHHHHHHHHTCSEEEEEESSSSSBSSCTTTCTTCCBCCEEEHHHHHHHHHHHSSCCCHHH
T ss_pred cccCCCCCceEEeCCCChHHHHHHHHHHcCCCEEEEEeCCCCcCCCCCCCCCCCEEecEeCHHHHHHHHhcCcchhHHHH
Confidence 2 2 23567999999999999999999999999999999999999999999999998876 889999999
Q ss_pred HHHHHhCCCcEEEEeCCCcchHHHHhcCCCcceEEecCC
Q 021163 269 ITLCQENNIPVVVFNLNQPGNIAKAIQGERVGTLIGGTW 307 (316)
Q Consensus 269 a~~a~~~gI~v~I~ng~~p~~i~~~l~G~~~GT~I~~~~ 307 (316)
+++|.++|||++|.|+++|+ ..||+|.+..
T Consensus 296 ~~~a~~~gIpv~I~n~~~p~---------~~GT~I~~~~ 325 (510)
T 2cdq_A 296 MRPAREGEIPVRVKNSYNPK---------APGTIITKTR 325 (510)
T ss_dssp HHHHHHHTCCEEEEETTSTT---------SCCEEEESCC
T ss_pred HHHHHHCCCeEEEEccCcCC---------CCCeEEeccc
Confidence 99999999999999999985 5799998753
No 30
>2j0w_A Lysine-sensitive aspartokinase 3; feedback inhibition, allosteric regulation, ACT domain, transferase, amino acid biosynthesis; HET: ADP; 2.5A {Escherichia coli} SCOP: c.73.1.3 d.58.18.10 d.58.18.10 PDB: 2j0x_A*
Probab=99.95 E-value=1.2e-27 Score=237.44 Aligned_cols=161 Identities=20% Similarity=0.253 Sum_probs=132.7
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeccccc----ccc--chH---HH---H-HHHHHHhCCCEEEEeCCCC
Q 021163 137 RSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMS----EVA--EPY---IR---R-RAVRHLEKGRVVIFAAGTG 203 (316)
Q Consensus 137 ~~~~d~v~~la~~lna~Lv~~~L~~~Gi~a~~l~~~~~~----~~~--~~~---i~---~-~l~~lL~~g~IPVv~g~~g 203 (316)
++..|.+.++|+.+++.+++.+|+++|+++.++++.+.- ++. +.+ .. . .+..+++ +.|||++|+.+
T Consensus 108 ~~~~d~l~s~Ge~~s~~l~~~~L~~~Gi~a~~l~~~~~l~t~~~~~~~~~~~~~~~~~~~~~l~~l~~-~~IpVv~Gf~g 186 (449)
T 2j0w_A 108 PALTDELVSHGELMSTLLFVEILRERDVQAQWFDVRKVMRTNDRFGRAEPDIAALAELAALQLLPRLN-EGLVITQGFIG 186 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEECCGGGTCBBCSCTTSCCBCHHHHHHHHHHHTHHHHH-HSEEEEESSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEchHHheeecCCCCCccccHhHhHHHHHHHHHHHhc-CCEEEEeCCee
Confidence 345677888999999999999999999999988887651 111 111 11 1 1234454 44999998632
Q ss_pred ---------CCCCCchHHHHHHHHhcCCcEEEEecccCcccccCCCCCCCCceeccccHHHHhhC---CCCCchHHHHHH
Q 021163 204 ---------NPFFTTDTAAALRCAEINAEVVLKATNVDGVYDDNPRRNPNARLLDTLTYQEVTSK---DLSVMDMTAITL 271 (316)
Q Consensus 204 ---------~~~~~sD~iAa~LA~~L~Ad~LiilTDVdGVyt~dP~~~p~aklI~~It~~e~~~l---G~~v~k~~Aa~~ 271 (316)
..+++||++|+++|.+|+|+++++||||||||++||+.+|++++|++++|+|+.++ |.+++|++|+++
T Consensus 187 ~~~~g~~ttl~rGgsD~~Aa~lA~~l~Ad~l~i~TDVdGv~~~DPr~~~~a~~i~~is~~e~~ela~~G~kvlh~~a~~~ 266 (449)
T 2j0w_A 187 SENKGRTTTLGRGGSDYTAALLAEALHASRVDIWTDVPGIYTTDPRVVSAAKRIDEIAFAEAAEMATFGAKVLHPATLLP 266 (449)
T ss_dssp ECTTSCEEECCTTHHHHHHHHHHHHTTCSEEEEEESSSSEESSCTTTCTTCCEESEEEHHHHHHHHHTTCTTSCTTTHHH
T ss_pred eCCCCCEEEeCCCChHHHHHHHHHHCCCCEEEEccccCCcCcCCCCCCCCCEEccCccHHHHHHHHhcCCccchHHHHHH
Confidence 24677999999999999999999999999999999999999999999999998875 888999999999
Q ss_pred HHhCCCcEEEEeCCCcchHHHHhcCCCcceEEecCC
Q 021163 272 CQENNIPVVVFNLNQPGNIAKAIQGERVGTLIGGTW 307 (316)
Q Consensus 272 a~~~gI~v~I~ng~~p~~i~~~l~G~~~GT~I~~~~ 307 (316)
|.++|+|++|+|+++|+ ..||+|.+..
T Consensus 267 a~~~gi~v~I~~~~~p~---------~~GT~I~~~~ 293 (449)
T 2j0w_A 267 AVRSDIPVFVGSSKDPR---------AGGTLVCNKT 293 (449)
T ss_dssp HHHHTCCEEEEESSCTT---------SCCEEEESCC
T ss_pred HHHCCCeEEEEECCCCC---------CCeeEEeccc
Confidence 99999999999999886 5799998753
No 31
>3l86_A Acetylglutamate kinase; ARGB, amino-acid biosynthesis, arginine biosynthesi binding, nucleotide-binding, transferase; HET: ADP NLG; 2.06A {Streptococcus mutans}
Probab=99.95 E-value=1.6e-27 Score=223.15 Aligned_cols=202 Identities=21% Similarity=0.284 Sum_probs=144.7
Q ss_pred CCCCCCCCCeEEEEECccccccCCCCC---------CCCCeEEEEChhHHHHHH-HHccc-----CC--CC-ccHHHHHH
Q 021163 83 MSKPSYKWQRVLLKVSGEALAGDHTQN---------IDPKVAIVVGGGNIFRGA-SAAGN-----SG--LD-RSSADYIG 144 (316)
Q Consensus 83 ~~~~~~~~k~iVIKiGGS~i~~~~~~~---------~~~~vVIVhGGG~~a~G~-~~l~~-----~g--l~-~~~~d~v~ 144 (316)
+.++.++ |++|||+||+++++..... ...++|||||||+++... ..++. .| ++ +..++.++
T Consensus 30 ~~~~~m~-k~iVIKiGGs~l~~~~~~l~~dIa~L~~~G~~vVlVhgGg~~i~~~l~~lg~~~~~~~G~Rvtd~~~l~~v~ 108 (279)
T 3l86_A 30 MGRGSMK-DIIVIKIGGVASQQLSGDFLSQIKNWQDAGKQLVIVHGGGFAINKLMEENQVPVKKINGLRVTSKDDMVLVS 108 (279)
T ss_dssp -----CC-CEEEEEECTTGGGSCCHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHHTTCCCCEETTEECBCHHHHHHHH
T ss_pred cccccCC-ceEEEEEChHHHHhHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHHHcCCCCccCCCcccCcHHHHHHHH
Confidence 3344343 8999999999998742110 134789999999886543 34431 12 11 12345555
Q ss_pred H-HHHHHHHHHHHHHHHhCCCCeEEEecccccccc----c--hH--------HH-HHHHHHHhCCCEEEEeCC----CCC
Q 021163 145 M-LATVMNAIFLQATMESIGIPTRVQTAFRMSEVA----E--PY--------IR-RRAVRHLEKGRVVIFAAG----TGN 204 (316)
Q Consensus 145 ~-la~~lna~Lv~~~L~~~Gi~a~~l~~~~~~~~~----~--~~--------i~-~~l~~lL~~g~IPVv~g~----~g~ 204 (316)
+ +++.+|..+. +.|+++|++++.+++.+...+. + .| ++ +.+..+|++|+|||+++. .|.
T Consensus 109 ~~l~G~ln~~i~-~~L~~~G~~a~~l~g~dg~llta~~~~~~d~g~vG~i~~v~~~~i~~lL~~g~IPVi~~v~~~~~G~ 187 (279)
T 3l86_A 109 HALLDLVGKNLQ-EKLRQAGVSCQQLKSDIKHVVAADYLDKDTYGYVGDVTHINKRVIEEFLENRQIPILASLGYSKEGD 187 (279)
T ss_dssp HHHHHTTHHHHH-HHHHHTTCCEEECSGGGGGTEEEEESCHHHHBSBEEEEEECHHHHHHHHHTTCEEEEESEEECTTSC
T ss_pred HHHHHHHHHHHH-HHHHhCCCCEEEEecCcCCEEEeeccCccccCcccccchhhHHHHHHHHhCCcEEEECCcEECCCCC
Confidence 5 5667887765 5999999999977665532211 0 11 22 446789999999999983 233
Q ss_pred CC-CCchHHHHHHHHhcCCcEEEEecccCcccccCCCCCCCCceeccccHHHHhhC-------CCCCchHHHHHHHHhCC
Q 021163 205 PF-FTTDTAAALRCAEINAEVVLKATNVDGVYDDNPRRNPNARLLDTLTYQEVTSK-------DLSVMDMTAITLCQENN 276 (316)
Q Consensus 205 ~~-~~sD~iAa~LA~~L~Ad~LiilTDVdGVyt~dP~~~p~aklI~~It~~e~~~l-------G~~v~k~~Aa~~a~~~g 276 (316)
.+ .++|++|+++|.+|+||+|+|+|||||||+ ++++|++++++|++++ |.|..|++|+..|.+.|
T Consensus 188 ~~~i~~D~~Aa~lA~~L~Ad~LiilTDVdGV~~-------d~~~I~~i~~~e~~~l~~~~~~tGGM~~Kl~aa~~a~~~G 260 (279)
T 3l86_A 188 MLNINADYLATAVAVALAADKLILMTNVKGVLE-------NGAVLEKITSHQVQEKIDTAVITAGMIPKIESAAKTVAAG 260 (279)
T ss_dssp EEECCHHHHHHHHHHHTTCSEEEEECSSSSCEE-------TTEECCEEEGGGSHHHHHTTSSCTTHHHHHHHHHHHHHTT
T ss_pred EeecCHHHHHHHHHHHcCCCEEEEEeCCCcccc-------CCEehhhccHHHHHHHHhCCCCcCcHHHHHHHHHHHHHcC
Confidence 33 499999999999999999999999999995 3789999999887653 45677999999999999
Q ss_pred Cc-EEEEeCCCcchHHHHhcCCCcceEEec
Q 021163 277 IP-VVVFNLNQPGNIAKAIQGERVGTLIGG 305 (316)
Q Consensus 277 I~-v~I~ng~~p~~i~~~l~G~~~GT~I~~ 305 (316)
++ ++|+|++.. ||+|..
T Consensus 261 v~~v~I~~~~~~------------GT~i~~ 278 (279)
T 3l86_A 261 VGQVLIGDNLLT------------GTLITA 278 (279)
T ss_dssp CSEEEEESSSSC------------SEEEEC
T ss_pred CCEEEEeccCCC------------CeEEec
Confidence 98 999998652 999865
No 32
>2e9y_A Carbamate kinase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=99.95 E-value=7.9e-28 Score=228.63 Aligned_cols=210 Identities=17% Similarity=0.173 Sum_probs=150.0
Q ss_pred CCCeEEEEECccccccCCC--------CCC-------------CCCeEEEEChhHHHHHH-HHccc-CC-CCccHHHHHH
Q 021163 89 KWQRVLLKVSGEALAGDHT--------QNI-------------DPKVAIVVGGGNIFRGA-SAAGN-SG-LDRSSADYIG 144 (316)
Q Consensus 89 ~~k~iVIKiGGS~i~~~~~--------~~~-------------~~~vVIVhGGG~~a~G~-~~l~~-~g-l~~~~~d~v~ 144 (316)
+.+++|||+||+++++++. ..+ ..++|||||||.++..+ ..++. .. .++..++.++
T Consensus 3 ~~~~iVIKlGGs~l~~~~~~~~~~~~~~~~~~~a~~I~~l~~~G~~vVlVhGgg~~~~~~~~~~~~~~~~t~~~~l~~~~ 82 (316)
T 2e9y_A 3 SGRLAVIALGGNAIAGPGMDVSVESQTAAVKRASSIIADVLADGWRSVITHGNGPQVGYLSEAFEALPPERPRQPLYIAT 82 (316)
T ss_dssp -CCEEEEECCHHHHSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHTSCTTSCCCCHHHHH
T ss_pred CCCEEEEEEChHHhcCCCCCcchhhHHHHHHHHHHHHHHHHHCCCEEEEEcCCcHHHhHHHHHcCCCCCCCCHHHHHHHH
Confidence 4679999999999995432 011 23689999999998653 23321 01 1334456655
Q ss_pred H-----HHHHHHHHHHHHHHHhCCCCe--------EEEeccccc---------cc------------------cc-----
Q 021163 145 M-----LATVMNAIFLQATMESIGIPT--------RVQTAFRMS---------EV------------------AE----- 179 (316)
Q Consensus 145 ~-----la~~lna~Lv~~~L~~~Gi~a--------~~l~~~~~~---------~~------------------~~----- 179 (316)
+ ++..++. .+.+.|.++|+++ +.++..+.. .+ .+
T Consensus 83 ~~~~G~i~~~l~~-~l~~~l~~~g~~a~~~~v~~qv~l~~~d~~f~~~~k~~g~~~~~~~a~~~~~~~g~~~~~~~g~g~ 161 (316)
T 2e9y_A 83 AMTQAWIGLLLKH-SLEEELRRRGLNVLVPVVISRVLVDVSDPSFNNPSKPVGPIYGREEAEELSRRYGWVFKRDPRGGF 161 (316)
T ss_dssp HHHHHHHHHHHHH-HHHHHHHHTTCCCCCCEECCEEEECTTCGGGTSCCEEEEEEECHHHHHHHHHHHCCEEEECTTSSE
T ss_pred HHHHhHHHHHHHH-HHHHHHHhcCCCccccceeeEEEeccccccccccccccccccchhhhhhhhhhcceeeeccccccc
Confidence 4 2223454 4556888999996 333333210 00 00
Q ss_pred ------h----HHH-HHHHHHHhCCCEEEEeCCCCC--------------CCCCchHHHHHHHHhcCCcEEEEecccCcc
Q 021163 180 ------P----YIR-RRAVRHLEKGRVVIFAAGTGN--------------PFFTTDTAAALRCAEINAEVVLKATNVDGV 234 (316)
Q Consensus 180 ------~----~i~-~~l~~lL~~g~IPVv~g~~g~--------------~~~~sD~iAa~LA~~L~Ad~LiilTDVdGV 234 (316)
+ .++ ..+..+|++|.|||++|++|. .++++|++|+++|.+|+||+|+|+||||||
T Consensus 162 r~vv~sp~~i~~v~~~~i~~lL~~g~IpI~~g~~g~pv~~~~~g~~~g~~~~id~D~~Aa~lA~~l~Ad~LiilTdVdGV 241 (316)
T 2e9y_A 162 RRVVPSPRPVSIVDRDLIAEASAESPAVVALGGGGVPVVERPGGVLEPVEAVVDKDLASSLLATQLNADLLVILTDVPGV 241 (316)
T ss_dssp EEEECCCCEEEETTHHHHHHHHHHCSEEEECGGGCEEEEECTTSCEEECSCCCCHHHHHHHHHHHTTCSEEEEEESSSSC
T ss_pred eecccCCCcceeehHHHHHHHHHCCCEEEEECCCCCCeeECCCCCeecceeeeCHHHHHHHHHHHcCCCEEEEEeCchHh
Confidence 0 023 335679999999999864321 234999999999999999999999999999
Q ss_pred cccCCCCCCCCceeccccHHHHhhC--------CCCCchHHHHHHHHhCCC-cEEEEeCCCcchHHHHhcCCCcceEEec
Q 021163 235 YDDNPRRNPNARLLDTLTYQEVTSK--------DLSVMDMTAITLCQENNI-PVVVFNLNQPGNIAKAIQGERVGTLIGG 305 (316)
Q Consensus 235 yt~dP~~~p~aklI~~It~~e~~~l--------G~~v~k~~Aa~~a~~~gI-~v~I~ng~~p~~i~~~l~G~~~GT~I~~ 305 (316)
|+ ||+ +|++++|++|+++|+.++ |.|..|++|+..+.++|+ +++|++ ++++.++++| ..||+|.+
T Consensus 242 y~-dp~-~p~a~~i~~i~~~e~~~~~~~g~~~~GgM~~Kv~aa~~a~~~gv~~v~I~~---~~~l~~~l~g-~~GT~i~~ 315 (316)
T 2e9y_A 242 AV-NYG-REGERWLRRAAASELKKYLREGHFPPGSMGPKVEAAISFVERTGKPAVIGS---LEEARQVLSL-QAGTVVML 315 (316)
T ss_dssp EE-TTT-STTCEECSEEEHHHHHHHHHTTCSCTTTHHHHHHHHHHHHHHHCSCEEEEE---STTHHHHHTT-SSSEEEEC
T ss_pred hC-CCC-CCCCcCCcEEcHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCCCeEEECc---HHHHHHHHcC-CCCeEEec
Confidence 99 784 789999999999988764 346679999999999999 799987 5668899998 78999975
No 33
>2we5_A Carbamate kinase 1; arginine catabolism, arginine metabolism, ATP synthesys, open alpha/beta sheet, phosphotransferase, transferase; HET: ADP; 1.39A {Enterococcus faecalis} PDB: 1b7b_A 2we4_A*
Probab=99.95 E-value=2.9e-27 Score=224.04 Aligned_cols=210 Identities=15% Similarity=0.181 Sum_probs=147.9
Q ss_pred CCeEEEEECccccccCCC------CC-------------CCCCeEEEEChhHHHHHH-HHcc---cCCCCccHHHHHHH-
Q 021163 90 WQRVLLKVSGEALAGDHT------QN-------------IDPKVAIVVGGGNIFRGA-SAAG---NSGLDRSSADYIGM- 145 (316)
Q Consensus 90 ~k~iVIKiGGS~i~~~~~------~~-------------~~~~vVIVhGGG~~a~G~-~~l~---~~gl~~~~~d~v~~- 145 (316)
+|++|||+||+++++... .. ...++|||||||.++..+ ..++ ++..+...++.+.+
T Consensus 2 ~k~iVIKlGGs~l~~~~~~~~~~~~~~~~~a~~I~~l~~~G~~vVlVhGgg~~~~~~l~~~~~~~~~~~~~~~l~~~~a~ 81 (310)
T 2we5_A 2 GKKMVVALGGNAILSNDASAHAQQQALVQTSAYLVHLIKQGHRLIVSHGNGPQVGNLLLQQQAADSEKNPAMPLDTCVAM 81 (310)
T ss_dssp CCEEEEECCGGGGCCSSCSHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHTCSSSSCCCCHHHHHHH
T ss_pred CcEEEEEEChHHhcCCCCChHHHHHHHHHHHHHHHHHHHCCCeEEEEECCcHHHhHHHHHcCCCCCCCCCHHHHHHHHHH
Confidence 478999999999986100 00 123689999999998653 2332 12224445665543
Q ss_pred HHHHHHHHH---HHHHHHhCCCCe------------------------EEE--ecccc-----ccc---cc---hH----
Q 021163 146 LATVMNAIF---LQATMESIGIPT------------------------RVQ--TAFRM-----SEV---AE---PY---- 181 (316)
Q Consensus 146 la~~lna~L---v~~~L~~~Gi~a------------------------~~l--~~~~~-----~~~---~~---~~---- 181 (316)
..+.++..+ ++..|.+.|++. +++ +..+. ..+ .+ .|
T Consensus 82 ~~G~l~~~i~~al~~~l~~~g~~~~v~~~l~~~~v~~~d~~f~~~~~~vg~~~t~~da~~l~~~~~~~~~~~~~~~~~vv 161 (310)
T 2we5_A 82 TQGSIGYWLSNALNQELNKAGIKKQVATVLTQVVVDPADEAFKNPTKPIGPFLTEAEAKEAMQAGAIFKEDAGRGWRKVV 161 (310)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCEEEBCCEEEECTTCHHHHSCCEEEEEEECHHHHHHHHTTTCCEEECTTSCEEEEE
T ss_pred hhhHHHHHHHHHHHHHHHhcCCchhhHhhhhhhcccccchhhcccCceeEEeccHHHHHHHHhccccccccCCcceeecc
Confidence 233332222 345687888873 111 11110 001 00 01
Q ss_pred --------HH-HHHHHHHhCCCEEEEeCCCC-----------CCCCCchHHHHHHHHhcCCcEEEEecccCcccccCCCC
Q 021163 182 --------IR-RRAVRHLEKGRVVIFAAGTG-----------NPFFTTDTAAALRCAEINAEVVLKATNVDGVYDDNPRR 241 (316)
Q Consensus 182 --------i~-~~l~~lL~~g~IPVv~g~~g-----------~~~~~sD~iAa~LA~~L~Ad~LiilTDVdGVyt~dP~~ 241 (316)
++ ..+..+|++|+|||++|+.| ..++++|++|+++|.+|+||+|+++|||||||+ || .
T Consensus 162 ~sp~~i~~v~~~~i~~lL~~g~IpIi~Gg~Gipv~~~~~~g~~~~~~~D~~Aa~lA~~l~Ad~LiilTdVdGVy~-dp-~ 239 (310)
T 2we5_A 162 PSPKPIDIHEAETINTLIKNDIITISCGGGGIPVVGQELKGVEAVIDKDFASEKLAELVDADALVILTGVDYVCI-NY-G 239 (310)
T ss_dssp CCCCEEEETTHHHHHHHHHTTCEEECCGGGCEEEETTTTEECCCCCCHHHHHHHHHHHTTCSEEEEECSCSSCEE-ST-T
T ss_pred CCcccceeehHHHHHHHHHCCCEEEEECCCCCCCcCCCCCCcEeecCHHHHHHHHHHHcCCCEEEEEeCchHhhC-CC-C
Confidence 33 34677999999999995533 235789999999999999999999999999999 78 5
Q ss_pred CCCCceeccccHHHHhhC--------CCCCchHHHHHHHHhCCC--cEEEEeCCCcchHHHHhcCCCcceEEe
Q 021163 242 NPNARLLDTLTYQEVTSK--------DLSVMDMTAITLCQENNI--PVVVFNLNQPGNIAKAIQGERVGTLIG 304 (316)
Q Consensus 242 ~p~aklI~~It~~e~~~l--------G~~v~k~~Aa~~a~~~gI--~v~I~ng~~p~~i~~~l~G~~~GT~I~ 304 (316)
+|++++|++++++|+.++ |.|..|++|+..|.+.|+ +++|++ ++++.++++|+..||+|.
T Consensus 240 ~~~a~~i~~i~~~e~~~~~~~g~~~~GgM~~Kv~aa~~a~~~gv~~~v~I~~---~~~l~~~l~g~~~GT~i~ 309 (310)
T 2we5_A 240 KPDEKQLTNVTVAELEEYKQAGHFAPGSMLPKIEAAIQFVESQPNKQAIITS---LENLGSMSGDEIVGTVVT 309 (310)
T ss_dssp STTCEECCEEEHHHHHHHHHTTCSCTTTTHHHHHHHHHHHHHSTTCEEEEEC---SGGGGGCBTTBCCSEEEE
T ss_pred CCCCeECCEEcHHHHHHHhhCCCCCCCChHHHHHHHHHHHHcCCCceEEECc---HHHHHHHHcCCCCCeEEe
Confidence 889999999999988764 557789999999999999 899996 567888999988999996
No 34
>3d2m_A Putative acetylglutamate synthase; protein-COA-Glu ternary complex, transferase; HET: COA GLU; 2.21A {Neisseria gonorrhoeae} PDB: 2r8v_A* 3b8g_A* 2r98_A* 3d2p_A*
Probab=99.94 E-value=6.2e-27 Score=231.54 Aligned_cols=210 Identities=17% Similarity=0.178 Sum_probs=153.3
Q ss_pred CCCeEEEEECccccccCCCCC----------CCCCeEEEEChhHHHHHHHHcccCCCC-----------ccHHHHHHHHH
Q 021163 89 KWQRVLLKVSGEALAGDHTQN----------IDPKVAIVVGGGNIFRGASAAGNSGLD-----------RSSADYIGMLA 147 (316)
Q Consensus 89 ~~k~iVIKiGGS~i~~~~~~~----------~~~~vVIVhGGG~~a~G~~~l~~~gl~-----------~~~~d~v~~la 147 (316)
+.|++|||+||+++++++... ...++|||||||.++... +++.++. +..++.+++.+
T Consensus 42 ~~~~iViK~GG~~l~~~~~~~~~~~i~~l~~~g~~vvlVhggg~~~~~~--~~~~~~~~~~~~g~r~t~~~~l~~~~~~~ 119 (456)
T 3d2m_A 42 RGTTLVAGIDGRLLEGGTLNKLAADIGLLSQLGIRLVLIHGAYHFLDRL--AAAQGRTPHYCRGLRVTDETSLGQAQQFA 119 (456)
T ss_dssp TTCEEEEEECGGGGTSTHHHHHHHHHHHHHHTTCEEEEEECCHHHHHTT--TTTTTCCCCCGGGCCCBCHHHHHHHHHHH
T ss_pred cCCEEEEEEChHHhcCchHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHH--HHHCCCCCEeeCCeecCCHHHHHHHHHHH
Confidence 467899999999998764111 124789999999996432 2222332 23456666655
Q ss_pred HHHHHHHHHHHHHhCCCCe----EEEeccccc-------------ccc---c-hHHH-HHHHHHHhCCCEEEEeCC----
Q 021163 148 TVMNAIFLQATMESIGIPT----RVQTAFRMS-------------EVA---E-PYIR-RRAVRHLEKGRVVIFAAG---- 201 (316)
Q Consensus 148 ~~lna~Lv~~~L~~~Gi~a----~~l~~~~~~-------------~~~---~-~~i~-~~l~~lL~~g~IPVv~g~---- 201 (316)
+.+|..+. +.|. +|+++ +.+++.+.. ++. + .+++ ..+..+|++|.|||++++
T Consensus 120 G~~~~~l~-~~l~-~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~g~~g~v~~v~~~~i~~lL~~g~ipIi~~~~~~~ 197 (456)
T 3d2m_A 120 GTVRSRFE-AALC-GSVSGFARAPSVPLVSGNFLTARPIGVIDGTDMEYAGVIRKTDTAALRFQLDAGNIVWMPPLGHSY 197 (456)
T ss_dssp HHHHHHHH-HHHH-TC--------CCCEECCSCEEEEECCEETTEECBTBEEEEEECHHHHHHHHHTTCEEEECSEEECT
T ss_pred hHHHHHHH-HHHh-cccccCCCccceeeccCcEEEEEEcccccCcccCceeeEEEECHHHHHHHHHCCCeEEECCcccCC
Confidence 77887765 4787 88887 433332211 111 0 1233 346789999999999974
Q ss_pred CC-CCCCCchHHHHHHHHhcCCcEEEEecccCcccccCCCCCCCCceeccccHHHHhhC-----CCCCchHHHHHHHHhC
Q 021163 202 TG-NPFFTTDTAAALRCAEINAEVVLKATNVDGVYDDNPRRNPNARLLDTLTYQEVTSK-----DLSVMDMTAITLCQEN 275 (316)
Q Consensus 202 ~g-~~~~~sD~iAa~LA~~L~Ad~LiilTDVdGVyt~dP~~~p~aklI~~It~~e~~~l-----G~~v~k~~Aa~~a~~~ 275 (316)
.| ..++++|++|+++|.+|+||+|+|+|||||||++ ++++|++|+++|+.++ |.|..|++|+..|.+.
T Consensus 198 ~g~~~~~~~D~~Aa~lA~~l~Ad~li~lTdvdGv~~~------~~~~i~~i~~~e~~~~~~~g~ggm~~Kl~aa~~a~~~ 271 (456)
T 3d2m_A 198 GGKTFNLDMVQAAASVAVSLQAEKLVYLTLSDGISRP------DGTLAETLSAQEAQSLAEHAASETRRLISSAVAALEG 271 (456)
T ss_dssp TSCEEECCHHHHHHHHHHHHTCSEEEEEESSSSCBCT------TSCBCSEEEHHHHHHHHTTCCHHHHHHHHHHHHHHHT
T ss_pred CCCEEEECHHHHHHHHHHHcCCCEEEEEECCccccCC------CCCccccCCHHHHHHHHhccCCChHHHHHHHHHHHHh
Confidence 22 3457999999999999999999999999999986 5899999999988764 3467799999999999
Q ss_pred CCc-EEEEeCCCcchH-HHHhcCCCcceEEecCCC
Q 021163 276 NIP-VVVFNLNQPGNI-AKAIQGERVGTLIGGTWN 308 (316)
Q Consensus 276 gI~-v~I~ng~~p~~i-~~~l~G~~~GT~I~~~~~ 308 (316)
|++ ++|+|+++|+++ .++++++..||+|.++..
T Consensus 272 gv~~v~I~~~~~~~~ll~~l~~~~~~GT~i~~~~~ 306 (456)
T 3d2m_A 272 GVHRVQILNGAADGSLLQELFTRNGIGTSIAKEAF 306 (456)
T ss_dssp TCSEEEEEETTSTTHHHHHHHCSSCSSEEEECCCC
T ss_pred CCCEEEEecCcCCchHHHHHHhhcCCceeeecccc
Confidence 995 999999999998 577888889999987654
No 35
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=99.94 E-value=1.6e-26 Score=229.03 Aligned_cols=155 Identities=20% Similarity=0.260 Sum_probs=125.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccc------hHHHHHHHHHHhCCCEEEEeCCCC---------
Q 021163 139 SADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVAE------PYIRRRAVRHLEKGRVVIFAAGTG--------- 203 (316)
Q Consensus 139 ~~d~v~~la~~lna~Lv~~~L~~~Gi~a~~l~~~~~~~~~~------~~i~~~l~~lL~~g~IPVv~g~~g--------- 203 (316)
..|++.+.||++++.|++.+|. +.++++.+...+.+ .+..+.+..+|+.|.|||++||.|
T Consensus 108 ~~D~lls~GE~lS~~lla~~l~-----a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~v~Vv~Gf~g~~~~g~~~t 182 (446)
T 3tvi_A 108 SSDYAASRGEYLNGVILAKYLN-----AEFIDAAEVIFFDKSGCFDEKKSYEKIKEKVLSCNKAVIPGFYGSSFNGDVKT 182 (446)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHT-----CEECCGGGTCBBCC--CBCHHHHHHHHHHHTTTCSSEECCCSEEECTTSCEEE
T ss_pred cHHHHHHhHHHHHHHHHHHHhc-----ceeECHHHheeeCCCCceehHhhHHHHHHHHhcCCeEEeeCceecCCCCCeEE
Confidence 3577888999999999998864 45555544432221 122345678899999999998622
Q ss_pred CCCCCchHHHHHHHHhcCCcEEEEecccCcccccCCCCCCCCceeccccHHHHhhC---CCCCchHHHHHHHHhCCCcEE
Q 021163 204 NPFFTTDTAAALRCAEINAEVVLKATNVDGVYDDNPRRNPNARLLDTLTYQEVTSK---DLSVMDMTAITLCQENNIPVV 280 (316)
Q Consensus 204 ~~~~~sD~iAa~LA~~L~Ad~LiilTDVdGVyt~dP~~~p~aklI~~It~~e~~~l---G~~v~k~~Aa~~a~~~gI~v~ 280 (316)
..+++||++|+++|.+|+|+++++||||||||++||+.+|++++|++++|+|+.++ |++++|++|+++|.++|||++
T Consensus 183 l~rGgsD~~Aa~lA~~l~A~~~~i~TDVdGvyt~dP~~~~~a~~i~~is~~e~~ela~~Ga~vl~~~a~~~a~~~~ipi~ 262 (446)
T 3tvi_A 183 FSRGGSDVTGSIISAGVNADLYENWTDVSGFLMADPRIVENPKTISKISYKELRELSYMGATVLHEEAIFPVKDSGIPIN 262 (446)
T ss_dssp CSSSTTHHHHHHHHHHTTCSEEEEEESSSSCBSSCTTTSSSCCBCSEEEHHHHHHTTTC----CCSTTTHHHHHSSCCEE
T ss_pred EccCCchHHHHHHHHHcCCCEEEEEeCCCccCCCCCCcCCCCeEcceeCHHHHHHHHhCCCCcchHHHHHHHHHcCCeEE
Confidence 24678999999999999999999999999999999999999999999999999885 788999999999999999999
Q ss_pred EEeCCCcchHHHHhcCCCcceEEecCC
Q 021163 281 VFNLNQPGNIAKAIQGERVGTLIGGTW 307 (316)
Q Consensus 281 I~ng~~p~~i~~~l~G~~~GT~I~~~~ 307 (316)
|.|+++|+ ..||+|.+..
T Consensus 263 i~~~~~p~---------~~GT~i~~~~ 280 (446)
T 3tvi_A 263 IKNTNKPS---------DPGTLILSDT 280 (446)
T ss_dssp EEETTBTT---------SCCEEEECTT
T ss_pred EecCCCCC---------CCCEEEecCC
Confidence 99999886 5799998754
No 36
>1e19_A Carbamate kinase-like carbamoylphosphate synthetase; transferase, hyperthermophiles, ADP site, phosphoryl group transfer; HET: ADP; 1.5A {Pyrococcus furiosus} SCOP: c.73.1.1
Probab=99.94 E-value=1.4e-26 Score=219.87 Aligned_cols=209 Identities=18% Similarity=0.244 Sum_probs=143.6
Q ss_pred CCeEEEEECccccccCCC--------CC-------------CCCCeEEEEChhHHHHHHH-Hccc---C-CCCccHHHHH
Q 021163 90 WQRVLLKVSGEALAGDHT--------QN-------------IDPKVAIVVGGGNIFRGAS-AAGN---S-GLDRSSADYI 143 (316)
Q Consensus 90 ~k~iVIKiGGS~i~~~~~--------~~-------------~~~~vVIVhGGG~~a~G~~-~l~~---~-gl~~~~~d~v 143 (316)
.|++|||+||+++++++. .. ...++|||||||..+.... .++. + ..+....+.+
T Consensus 2 ~k~iViK~GGsal~~~~~~~~~~~~~~~~~~~a~~I~~l~~~G~~vVlVhGgg~~i~~~l~~~~~~~~~~~~~~~~l~~~ 81 (314)
T 1e19_A 2 GKRVVIALGGNALQQRGQKGSYEEMMDNVRKTARQIAEIIARGYEVVITHGNGPQVGSLLLHMDAGQATYGIPAQPMDVA 81 (314)
T ss_dssp CCEEEEECCGGGTCCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHH
T ss_pred CCEEEEEEChHHhcCCCCccchhhhHHHHHHHHHHHHHHHHCCCeEEEEeCChHHHhHHHHhccCccccCCCChhHHHHH
Confidence 479999999999995542 01 1236899999998864321 1110 0 1234445554
Q ss_pred HH-----HHHHHHHHHHHHHHHhCCCCe--------EEEecccc---------cc-------------c-----cc---h
Q 021163 144 GM-----LATVMNAIFLQATMESIGIPT--------RVQTAFRM---------SE-------------V-----AE---P 180 (316)
Q Consensus 144 ~~-----la~~lna~Lv~~~L~~~Gi~a--------~~l~~~~~---------~~-------------~-----~~---~ 180 (316)
.+ ++..++. ++...|.++|+++ +.++..+. +. . .+ .
T Consensus 82 ~a~~~G~i~~~l~~-~l~~~l~~~gi~a~~~~~~~qv~l~~~d~~f~~~~k~~g~~~t~~~a~~~~~~~g~~~~g~~~~~ 160 (314)
T 1e19_A 82 GAMSQGWIGYMIQQ-ALKNELRKRGMEKKVVTIITQTIVDKNDPAFQNPTKPVGPFYDEETAKRLAREKGWIVKEDSGRG 160 (314)
T ss_dssp HHHHHHHHHHHHHH-HHHHHHHHTTCCCCEEEBCCEEEECTTCGGGTSCCEEEEEEECHHHHHHHHHHHCCEEEECTTSC
T ss_pred HHHHhhHHHHHHHH-HHHHHHHHcCCchhhhhhheeeeecccchhhccccccccceecHHHhhhhhhhcCcccccccccc
Confidence 43 2223433 3456889999986 22332221 00 0 00 0
Q ss_pred ------------HHH-HHHHHHHhCCCEEEEeCCCC-------------CCCCCchHHHHHHHHhcCCcEEEEecccCcc
Q 021163 181 ------------YIR-RRAVRHLEKGRVVIFAAGTG-------------NPFFTTDTAAALRCAEINAEVVLKATNVDGV 234 (316)
Q Consensus 181 ------------~i~-~~l~~lL~~g~IPVv~g~~g-------------~~~~~sD~iAa~LA~~L~Ad~LiilTDVdGV 234 (316)
.++ ..+..+|++|+|||++|+.| ..++++|++|+++|.+|+||+|+++||||||
T Consensus 161 ~~~~v~s~~~i~~v~~~~i~~lL~~g~IpV~~Gg~giPi~~~~d~~~g~~~~~d~D~~Aa~lA~~l~Ad~li~lTdVdGv 240 (314)
T 1e19_A 161 WRRVVPSPDPKGHVEAETIKKLVERGVIVIASGGGGVPVILEDGEIKGVEAVIDKDLAGEKLAEEVNADIFMILTDVNGA 240 (314)
T ss_dssp EEEEECCCCEEEETTHHHHHHHHHTTCEEECSGGGCEEEEEETTEEEECCCCCCHHHHHHHHHHHTTCSEEEEEESSSSC
T ss_pred ccccccCcccceeehHHHHHHHHHCCCEEEEeCCCccCeEECCCCcceeEEeccHHHHHHHHHHHcCCCEEEEeccCCEE
Confidence 022 33678999999988875322 1358899999999999999999999999999
Q ss_pred cccCCCCCCCCceeccccHHHHhhC--------CCCCchHHHHHH-HHhCCCcEEEEeCCCcchHHHHhcCCCcceEEec
Q 021163 235 YDDNPRRNPNARLLDTLTYQEVTSK--------DLSVMDMTAITL-CQENNIPVVVFNLNQPGNIAKAIQGERVGTLIGG 305 (316)
Q Consensus 235 yt~dP~~~p~aklI~~It~~e~~~l--------G~~v~k~~Aa~~-a~~~gI~v~I~ng~~p~~i~~~l~G~~~GT~I~~ 305 (316)
|++|| +|++++|++++++|+.++ |.|..|++|+.. +.+.+++++|++. +.+.++++|+ .||+|.+
T Consensus 241 y~~~p--~~~a~~i~~i~~~e~~~~~~~g~~~~GgM~~Kv~aa~~~~~~~~~~v~I~~~---~~l~~~~~g~-~GT~i~~ 314 (314)
T 1e19_A 241 ALYYG--TEKEQWLREVKVEELRKYYEEGHFKAGSMGPKVLAAIRFIEWGGERAIIAHL---EKAVEALEGK-TGTQVLP 314 (314)
T ss_dssp EETTT--STTCEECCEEEHHHHHHHHHTTCSCTTTHHHHHHHHHHHHHHTCSEEEEEEG---GGHHHHHTTS-SSEEEEC
T ss_pred ECCCC--CCCCeECCEECHHHHHHHHhCCCcCCCChHHHHHHHHHHHHhCCCeEEEecH---HHHHHHHcCC-CCeEEcC
Confidence 99998 588999999999988764 345668888866 5557789999984 5688899884 8999964
No 37
>3zzh_A Acetylglutamate kinase; transferase, arginine biosynthesis; HET: ARG NLG; 2.10A {Saccharomyces cerevisiae} PDB: 3zzg_A 3zzf_A*
Probab=99.93 E-value=3.3e-26 Score=216.85 Aligned_cols=209 Identities=14% Similarity=0.205 Sum_probs=152.7
Q ss_pred CCCeEEEEECccccccCCCCC----------CCCCeEEEEChhHHHHHHH-Hccc-----CCCC---ccHHHHHHHHHHH
Q 021163 89 KWQRVLLKVSGEALAGDHTQN----------IDPKVAIVVGGGNIFRGAS-AAGN-----SGLD---RSSADYIGMLATV 149 (316)
Q Consensus 89 ~~k~iVIKiGGS~i~~~~~~~----------~~~~vVIVhGGG~~a~G~~-~l~~-----~gl~---~~~~d~v~~la~~ 149 (316)
..+.+|||+||++++++- .. ...++|||||||++++.+- .++. .|++ +..++.+.+....
T Consensus 47 ~~~~iViK~GGsv~~~~~-~~~~~dI~~l~~~G~~~VvVHGgG~~i~~~l~~~gi~~~~~~G~RvTd~~~l~vv~m~~~~ 125 (307)
T 3zzh_A 47 QQQFAVIKVGGAIISDNL-HELASCLAFLYHVGLYPIVLHGTGPQVNGRLEAQGIEPDYIDGIRITDEHTMAVVRKCFLE 125 (307)
T ss_dssp CSCCEEEEECHHHHHHSH-HHHHHHHHHHHHBTCCEEEEECCHHHHHHHHHHTTCCCCEETTEECBCHHHHHHHHHHHHH
T ss_pred CCCEEEEEEChHHhhchH-HHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHcCCCccccCCeecCCHHHHHHHHHHHHH
Confidence 457899999999987642 11 2357899999999987752 3321 2222 2345777775557
Q ss_pred HHHHHHHHHHHhCCCCeEEEecc--ccc-----cc---cc-hHHH-HHHHHHHhCCCEEEEeCC----CC-CCCCCchHH
Q 021163 150 MNAIFLQATMESIGIPTRVQTAF--RMS-----EV---AE-PYIR-RRAVRHLEKGRVVIFAAG----TG-NPFFTTDTA 212 (316)
Q Consensus 150 lna~Lv~~~L~~~Gi~a~~l~~~--~~~-----~~---~~-~~i~-~~l~~lL~~g~IPVv~g~----~g-~~~~~sD~i 212 (316)
+|..|+ ++|+++|++++++++- +.. ++ .+ ..++ +.+..+|++|.|||++++ .| ..++++|++
T Consensus 126 vn~~lv-~~L~~~G~~Av~l~gg~~~a~~~~~~d~g~~G~i~~v~~~~i~~lL~~g~IpVi~~~g~~~~G~~~~i~~D~~ 204 (307)
T 3zzh_A 126 QNLKLV-TALEQLGVRARPITSGVFTADYLDKDKYKLVGNIKSVTKEPIEASIKAGALPILTSLAETASGQMLNVNADVA 204 (307)
T ss_dssp HHHHHH-HHHHHTTCCEEEECSSSEEEEESCHHHHBSBEEEEEECCHHHHHHHHHTCEEEECCCEECTTCBEEBCCHHHH
T ss_pred HHHHHH-HHHHhCCCCeeEEcCCcEEEEecCccccCccccccccCHHHHHHHHHCCCEEEEeCCeECCCCcEEecCHHHH
Confidence 898887 4899999999988751 111 00 00 0122 446789999999999985 22 235799999
Q ss_pred HHHHHHhcCCcEEEEecccCcccccCCCCCCCCceeccccHHH-HhhC-------CCCCchHHHHHHHHhC---CCcEEE
Q 021163 213 AALRCAEINAEVVLKATNVDGVYDDNPRRNPNARLLDTLTYQE-VTSK-------DLSVMDMTAITLCQEN---NIPVVV 281 (316)
Q Consensus 213 Aa~LA~~L~Ad~LiilTDVdGVyt~dP~~~p~aklI~~It~~e-~~~l-------G~~v~k~~Aa~~a~~~---gI~v~I 281 (316)
|+++|.+|+|++|+|+|||||||++ |++++|+++++.| +.++ |.|..|++|++.|.+. +.+++|
T Consensus 205 A~~lA~~L~Ad~Li~lTdV~GV~~~-----~~~~~i~~i~~~e~~~~l~~~~~~tGGM~~Kl~aa~~a~~~v~~g~~v~I 279 (307)
T 3zzh_A 205 AGELARVFEPLKIVYLNEKGGIING-----STGEKISMINLDEEYDDLMKQSWVKYGTKLKIREIKELLDYLPRSSSVAI 279 (307)
T ss_dssp HHHHHHHHCCSEEEEECSSCSCEET-----TTTEECCEEEHHHHHHHHHTSTTSCHHHHHHHHHHHHHHHHSCTTCCEEE
T ss_pred HHHHHHhCCCCEEEEEeCCcceecC-----CCCcCCcccCHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHhccCeEEEE
Confidence 9999999999999999999999986 4689999999865 4332 3456798876666554 888999
Q ss_pred EeCCCcchH-HHHhcCCCcceEEecCC
Q 021163 282 FNLNQPGNI-AKAIQGERVGTLIGGTW 307 (316)
Q Consensus 282 ~ng~~p~~i-~~~l~G~~~GT~I~~~~ 307 (316)
++ ++.+ .+++.++.+||+|.+..
T Consensus 280 ~~---~~~ll~elft~~g~GT~I~~~~ 303 (307)
T 3zzh_A 280 IN---VQDLQKELFTDSGAGTMIRRGY 303 (307)
T ss_dssp EC---GGGHHHHHHSCCCCSEEEECCC
T ss_pred eC---ccHHHHHHhcCCCCcEEEecCC
Confidence 97 6776 56788889999998754
No 38
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=99.92 E-value=5.8e-25 Score=219.36 Aligned_cols=165 Identities=25% Similarity=0.326 Sum_probs=140.4
Q ss_pred CCCccHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecccccccc-------ch---HHHHHHHHHHhCCCEEEEeCCCC
Q 021163 134 GLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVA-------EP---YIRRRAVRHLEKGRVVIFAAGTG 203 (316)
Q Consensus 134 gl~~~~~d~v~~la~~lna~Lv~~~L~~~Gi~a~~l~~~~~~~~~-------~~---~i~~~l~~lL~~g~IPVv~g~~g 203 (316)
.+++...|++.++|+++|+.+++.+|+++|+++.++++.+.+.+. +. .....+..+|+.|+|||++|+.|
T Consensus 116 ~~~~~~~d~~~~~ge~~s~~l~~~~L~~~G~~a~~l~~~~~~i~t~~~~~~~~~~~~~~~~~i~~ll~~g~ipVv~G~~g 195 (473)
T 3c1m_A 116 ELTPKSRDYILSFGERLSSPILSGAIRDLGEKSIALEGGEAGIITDNNFGSARVKRLEVKERLLPLLKEGIIPVVTGFIG 195 (473)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECHHHHTEEECSCTTSCCEEEECHHHHHHHHHHTTCEEEEESSEE
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEchheeEEEccCCCCccccHhhhHHHHHHHHhCCcEEEEeCCcc
Confidence 345666899999999999999999999999999998887652111 11 12244667899999999998522
Q ss_pred ---------CCCCCchHHHHHHHHhcCCcEEEEecccCcccccCCCCCCCCceeccccHHHHhhC---CCCCchHHHHHH
Q 021163 204 ---------NPFFTTDTAAALRCAEINAEVVLKATNVDGVYDDNPRRNPNARLLDTLTYQEVTSK---DLSVMDMTAITL 271 (316)
Q Consensus 204 ---------~~~~~sD~iAa~LA~~L~Ad~LiilTDVdGVyt~dP~~~p~aklI~~It~~e~~~l---G~~v~k~~Aa~~ 271 (316)
..++++|++|+++|.+|+|+++++||||||||++||+.+|++++|++++++|+.++ |.++|+++|+++
T Consensus 196 ~~~~g~~~~l~rg~sD~~Aa~lA~~l~Ad~l~i~TDVdGv~~~dP~~~~~a~~i~~is~~e~~~l~~~g~~~m~~~a~~~ 275 (473)
T 3c1m_A 196 TTEEGYITTLGRGGSDYSAALIGYGLDADIIEIWTDVSGVYTTDPRLVPTARRIPKLSYIEAMELAYFGAKVLHPRTIEP 275 (473)
T ss_dssp EETTSCEEECCTTTHHHHHHHHHHHTTCSEEEEEESSSSCBSSCTTTCTTCCBCSEEEHHHHHHHHHTTCTTSCGGGHHH
T ss_pred cCCCCCEEEeCCCChHHHHHHHHHHcCCCEEEEeeCCCcceeCCCCCCCCCeEecccCHHHHHHHHhcCCcchHHHHHHH
Confidence 24679999999999999999999999999999999999999999999999998874 788999999999
Q ss_pred HHhCCCcEEEEeCCCcchHHHHhcCCCcceEEecCC
Q 021163 272 CQENNIPVVVFNLNQPGNIAKAIQGERVGTLIGGTW 307 (316)
Q Consensus 272 a~~~gI~v~I~ng~~p~~i~~~l~G~~~GT~I~~~~ 307 (316)
|.++|++++|+|+++|+ ..||+|.+..
T Consensus 276 a~~~gi~v~I~~~~~~~---------~~GT~i~~~~ 302 (473)
T 3c1m_A 276 AMEKGIPILVKNTFEPE---------SEGTLITNDM 302 (473)
T ss_dssp HHHHTCCEEEEETTSTT---------SCCEEEESCC
T ss_pred HHHcCCEEEEEecCCCC---------CceEEEeccc
Confidence 99999999999999986 5799998754
No 39
>4ab7_A Protein Arg5,6, mitochondrial; transferase, arginine biosynthesis, amino acid kinase domain GCN5-related acetyltransferase, GNAT; HET: NLG; 3.25A {Saccharomyces cerevisiae} PDB: 3zzi_A*
Probab=99.92 E-value=9.1e-25 Score=216.95 Aligned_cols=208 Identities=14% Similarity=0.199 Sum_probs=151.4
Q ss_pred CCeEEEEECccccccCCCC---------CCCCCeEEEEChhHHHHHH-HHccc-----CCCC---ccHHHHHHHHHHHHH
Q 021163 90 WQRVLLKVSGEALAGDHTQ---------NIDPKVAIVVGGGNIFRGA-SAAGN-----SGLD---RSSADYIGMLATVMN 151 (316)
Q Consensus 90 ~k~iVIKiGGS~i~~~~~~---------~~~~~vVIVhGGG~~a~G~-~~l~~-----~gl~---~~~~d~v~~la~~ln 151 (316)
.+++|||+||++++++-.. .+..++|||||||++++.+ ..++. .|++ ...++.+++....+|
T Consensus 48 ~~~iVIK~GGsv~~~~l~~la~dI~~l~~~G~~~VvVHGgG~~i~~~l~~~gi~~~f~~G~RvTd~~tl~vv~mv~~~vn 127 (464)
T 4ab7_A 48 QQFAVIKVGGAIISDNLHELASCLAFLYHVGLYPIVLHGTGPQVNGRLEAQGIEPDYIDGIRITDEHTMAVVRKCFLEQN 127 (464)
T ss_dssp -CCEEEEECHHHHHHCHHHHHHHHHHHHHTTCCCEEEECCCHHHHHHHHHTTCCCCEETTEECBCHHHHHHHHHHHHHHH
T ss_pred CceEEEEECHHHhhchHHHHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHcCCCccccCCeecCCHHHHHHHHHHHHHHH
Confidence 6789999999998764210 0234789999999998775 23331 2322 224567777656789
Q ss_pred HHHHHHHHHhCCCCeEEEecc--ccc-----ccc---c-hHHH-HHHHHHHhCCCEEEEeCC----CC-CCCCCchHHHH
Q 021163 152 AIFLQATMESIGIPTRVQTAF--RMS-----EVA---E-PYIR-RRAVRHLEKGRVVIFAAG----TG-NPFFTTDTAAA 214 (316)
Q Consensus 152 a~Lv~~~L~~~Gi~a~~l~~~--~~~-----~~~---~-~~i~-~~l~~lL~~g~IPVv~g~----~g-~~~~~sD~iAa 214 (316)
..|++ +|+++|++++++++- ... ++. + ..++ ..+..+|+.|.|||++|. .| ..++++|++|+
T Consensus 128 ~~lv~-~L~~~G~~Avglsgg~~~a~~~~~~d~g~vG~I~~v~~~~I~~lL~~G~IPVi~~~g~~~~G~~~ni~~D~~Aa 206 (464)
T 4ab7_A 128 LKLVT-ALEQLGVRARPITSGVFTADYLDKDKYKLVGNIKSVTKEPIEASIKAGALPILTSLAETASGQMLNVNADVAAG 206 (464)
T ss_dssp HHHHH-HHHHTTCCEEEECSSSEEEEESCTTTTBSBEEEEEECCHHHHHHHHTTCEEEEESEEECTTCBEEECCHHHHHH
T ss_pred HHHHH-HHHhCCCCeEEECCCcEEEEecCccccCCcCcccccCHHHHHHHHHCCcEEEEcCCcCCCCCCEEEecHHHHHH
Confidence 88774 899999999988751 111 111 1 0122 446789999999999984 23 23578999999
Q ss_pred HHHHhcCCcEEEEecccCcccccCCCCCCCCceeccccHHH-HhhC-------CCCCchHHHHHHHHhC---CCcEEEEe
Q 021163 215 LRCAEINAEVVLKATNVDGVYDDNPRRNPNARLLDTLTYQE-VTSK-------DLSVMDMTAITLCQEN---NIPVVVFN 283 (316)
Q Consensus 215 ~LA~~L~Ad~LiilTDVdGVyt~dP~~~p~aklI~~It~~e-~~~l-------G~~v~k~~Aa~~a~~~---gI~v~I~n 283 (316)
++|.+|+|++|+++|||||||++ |++++|++|++.| ++++ |.|.+|++|++.|.+. |.+++|++
T Consensus 207 ~lA~~L~Ad~Li~lTdV~GV~~~-----~~~~lI~~it~~e~~~~li~~~~~tgGM~pKl~aa~aa~~~v~~g~~v~I~~ 281 (464)
T 4ab7_A 207 ELARVFEPLKIVYLNEKGGIING-----STGEKISMINLDEEYDDLMKQSWVKYGTKLKIREIKELLDYLPRSSSVAIIN 281 (464)
T ss_dssp HHHHHHCCSEEEEEESSCSEECT-----TTCCEECEEEHHHHHHHHHTCSSCCHHHHHHHHHHHHHHTTSCTTCEEEEEE
T ss_pred HHHHHcCCCEEEEEecccccccC-----CCCcCCcccCHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHhcccCcEEEEec
Confidence 99999999999999999999986 3689999999875 3332 2366788888777764 77899998
Q ss_pred CCCcchH-HHHhcCCCcceEEecC
Q 021163 284 LNQPGNI-AKAIQGERVGTLIGGT 306 (316)
Q Consensus 284 g~~p~~i-~~~l~G~~~GT~I~~~ 306 (316)
++.+ .+++.++.+||.|.+.
T Consensus 282 ---~~~ll~eLft~~g~GT~I~~~ 302 (464)
T 4ab7_A 282 ---VQDLQKELFTDSGAGTMIRRG 302 (464)
T ss_dssp ---STTHHHHTTSSSTTSEEEECC
T ss_pred ---ChHHHHHHhcCCCCceEEecC
Confidence 4555 4677888899999987
No 40
>3s6g_A N-acetylglutamate kinase / N-acetylglutamate SYNT; synthase, transferase; HET: COA; 2.67A {Maricaulis maris} PDB: 3s7y_A 3s6h_A*
Probab=99.91 E-value=4.2e-25 Score=219.42 Aligned_cols=211 Identities=18% Similarity=0.224 Sum_probs=156.8
Q ss_pred CCCeEEEEECccccccCCCCC----------CCCCeEEEEChhHHHHHHH-Hccc-----CCCC---ccHHHHHHHHHHH
Q 021163 89 KWQRVLLKVSGEALAGDHTQN----------IDPKVAIVVGGGNIFRGAS-AAGN-----SGLD---RSSADYIGMLATV 149 (316)
Q Consensus 89 ~~k~iVIKiGGS~i~~~~~~~----------~~~~vVIVhGGG~~a~G~~-~l~~-----~gl~---~~~~d~v~~la~~ 149 (316)
..+++|||+||++++++- .. ...++|||||||++++..- .++. .|++ ...++.+.+....
T Consensus 57 ~~~~iViK~GGsv~~~~l-~~~a~dI~~l~~~G~~~VvVHGgG~~i~~~l~~~gi~~~f~~G~RvTd~~~l~vv~~~lg~ 135 (460)
T 3s6g_A 57 QERFAVIKVGGAVIQDDL-PGLASALAFLQTVGLTPVVVHGGGPQLDAALEAADIPTERVDGLRVTRDEAMPIIRDTLTQ 135 (460)
T ss_dssp GGGSEEEEECHHHHHHCH-HHHHHHHHHHHHHTCCCEEEECCHHHHHHHHHHHSCCCCCCSSSCCBCTTTHHHHHHHHHH
T ss_pred CCCEEEEEEChHHhhhHH-HHHHHHHHHHHHCCCcEEEEECCChHHHHHHHHcCCCccccCCccCCCHHHHHHHHHHHHH
Confidence 357899999999887641 11 2347899999999987652 3331 2332 2346666664458
Q ss_pred HHHHHHHHHHHhCCCCeEEEec--cccc-----ccc---c-hHHH-HHHHHHHhCCCEEEEeCC----CCC-CCCCchHH
Q 021163 150 MNAIFLQATMESIGIPTRVQTA--FRMS-----EVA---E-PYIR-RRAVRHLEKGRVVIFAAG----TGN-PFFTTDTA 212 (316)
Q Consensus 150 lna~Lv~~~L~~~Gi~a~~l~~--~~~~-----~~~---~-~~i~-~~l~~lL~~g~IPVv~g~----~g~-~~~~sD~i 212 (316)
+|..|++ +|+++|++++++++ +... +.. + ..++ +.+..+|++|.|||+++. .|. .++++|++
T Consensus 136 vn~~lv~-aL~~~G~~Av~lsg~~~~a~~~~~~d~g~~G~I~~v~~~~i~~lL~~g~IpVi~p~g~~~~G~~~~i~~D~~ 214 (460)
T 3s6g_A 136 ANLALVD-AIRDAGGRAAAVPRGVFEADIVDADKLGRVGEPRHIHLDLVGSAARAGQAAILACLGETPDGTLVNINADVA 214 (460)
T ss_dssp HHHHHHH-HHHHTTCCEEEECSSSEEEEESCTTTTBSEEEEEEECCHHHHHHHHTTCEEEEECEEECTTCCEEEECHHHH
T ss_pred HHHHHHH-HHHhCCCCceEEecCeEEEEEecCcccCccCcceEEcHHHHHHHHHCCcEEEEECceECCCCcEEecCHHHH
Confidence 9999886 89999999998876 2111 110 0 0122 446789999999999964 222 35689999
Q ss_pred HHHHHHhcCCcEEEEecccCcccccCCCCCCCCceeccccHH-HHhhC-------CCCCchHHHHHHHHhCCCcEEEEeC
Q 021163 213 AALRCAEINAEVVLKATNVDGVYDDNPRRNPNARLLDTLTYQ-EVTSK-------DLSVMDMTAITLCQENNIPVVVFNL 284 (316)
Q Consensus 213 Aa~LA~~L~Ad~LiilTDVdGVyt~dP~~~p~aklI~~It~~-e~~~l-------G~~v~k~~Aa~~a~~~gI~v~I~ng 284 (316)
|+++|.+|+|++|+++|||||||++ ++++|++|+.. |+.++ |.|..|++|+..|.+.+.+++|+++
T Consensus 215 Aa~lA~~L~Ad~LiilTdv~Gv~~~------~~~lI~~i~~~~e~~~l~~~~~~tGGM~~Kl~aa~~a~~gv~~v~iv~g 288 (460)
T 3s6g_A 215 VRALVHALQPYKVVFLTGTGGLLDE------DGDILSSINLATDFGDLMQADWVNGGMRLKLEEIKRLLDDLPLSSSVSI 288 (460)
T ss_dssp HHHHHHHHCCSEEEEECSSCSCBCT------TSSBCCEEEHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHTSCTTCEEEE
T ss_pred HHHHHHHcCCCEEEEEeCCccccCC------CCeecceeCcHHHHHHHHhcCCCCCcHHHHHHHHHHHHhCCCcEEEEEe
Confidence 9999999999999999999999984 47899999985 55543 3467799999998884446899999
Q ss_pred CCcchHH-HHhcCCCcceEEecCC
Q 021163 285 NQPGNIA-KAIQGERVGTLIGGTW 307 (316)
Q Consensus 285 ~~p~~i~-~~l~G~~~GT~I~~~~ 307 (316)
+.|+.+. +++.++.+||.|.+..
T Consensus 289 ~~~~~Ll~eLft~~g~GT~i~~~e 312 (460)
T 3s6g_A 289 TRPSELARELFTHAGSGTLIRRGE 312 (460)
T ss_dssp ECGGGHHHHHHSSCCSSEEEECCC
T ss_pred CCCcHHHHHHhcCCCCceEEEcCC
Confidence 9999986 6788889999999873
No 41
>4axs_A Carbamate kinase; oxidoreductase; 2.50A {Mycoplasma penetrans}
Probab=99.91 E-value=1e-23 Score=201.62 Aligned_cols=114 Identities=22% Similarity=0.299 Sum_probs=94.1
Q ss_pred HHHHHhCCCEEEEeCCCC-------------CCCCCchHHHHHHHHhcCCcEEEEecccCcccccCCCCCCCCceecccc
Q 021163 186 AVRHLEKGRVVIFAAGTG-------------NPFFTTDTAAALRCAEINAEVVLKATNVDGVYDDNPRRNPNARLLDTLT 252 (316)
Q Consensus 186 l~~lL~~g~IPVv~g~~g-------------~~~~~sD~iAa~LA~~L~Ad~LiilTDVdGVyt~dP~~~p~aklI~~It 252 (316)
+..++++|+|||..++.+ ..++++|++|+.||.+++||+|+|+|||||||+++|+ |++++|++++
T Consensus 196 I~~L~~~g~Ivi~~ggggipv~~~~~~~~G~~~vid~D~~Aa~lA~~l~Ad~LiiLTdV~gv~~~~~~--~~~~~i~~it 273 (332)
T 4axs_A 196 IKQNVNNGCVCIVGGGGGIPTIIQDNQYIGVDGVIDKDFALAKIADAVNADIFVVLTAVDYVYVDFNK--PTQKALKTVD 273 (332)
T ss_dssp HHHHHHTTCEEECCGGGCEEEEESSSCEEECSSCCCHHHHHHHHHHHTTCSEEEEECSCSSCEESTTS--TTCEECSSCB
T ss_pred HHHhhcCCeEEEecccCCCCccccCCcccCceeeechHHHHHHHHHHhCCceEEEEecCCceEcCCCC--cchhhcccCC
Confidence 567889999988765311 2468999999999999999999999999999998874 7789999999
Q ss_pred HHHHhhC--------CCCCchHHHHHHHHhCCC--cEEEEeCCCcchHHHHhcCCCcceEEec
Q 021163 253 YQEVTSK--------DLSVMDMTAITLCQENNI--PVVVFNLNQPGNIAKAIQGERVGTLIGG 305 (316)
Q Consensus 253 ~~e~~~l--------G~~v~k~~Aa~~a~~~gI--~v~I~ng~~p~~i~~~l~G~~~GT~I~~ 305 (316)
.+|+.++ |.|.+|++||..+.+.|. .++|.+ ++.+.++++|+ .||+|.+
T Consensus 274 ~~e~~~~~~~g~~~~GgM~pKv~Aa~~~v~~g~g~~~iI~~---~~~~~~~l~g~-~GT~IvA 332 (332)
T 4axs_A 274 VKALNNFINQDQFAKGSMLPKIKAAMGFVNGHPNRSAIIAD---LSKVEDALKGL-SGTKIIA 332 (332)
T ss_dssp HHHHHHHHHTTCSCTTTTHHHHHHHHHHHTTCTTCEEEEEC---STTHHHHTTTS-SSEEEBC
T ss_pred HHHHHHHHHCCCcCcCCcHHHHHHHHHHHHhCCCcEEEECC---HHHHHHHHCCC-CCcEEeC
Confidence 9988753 457889999999998765 466654 56688999996 7999964
No 42
>3kzf_A Carbamate kinase; arginine dihydrolase pathway, giardia LAMB target, transferase; 3.00A {Giardia lamblia atcc 50803}
Probab=99.90 E-value=3.1e-23 Score=196.32 Aligned_cols=210 Identities=17% Similarity=0.228 Sum_probs=144.2
Q ss_pred CCCeEEEEECccccccCCC-CCC--------------------CCCeEEEEChhHHH----HHHHHcccCCCCccHHH--
Q 021163 89 KWQRVLLKVSGEALAGDHT-QNI--------------------DPKVAIVVGGGNIF----RGASAAGNSGLDRSSAD-- 141 (316)
Q Consensus 89 ~~k~iVIKiGGS~i~~~~~-~~~--------------------~~~vVIVhGGG~~a----~G~~~l~~~gl~~~~~d-- 141 (316)
+.|++||++||.+|..... ..+ ..++||+||.|+.. .+..... ...+...+|
T Consensus 4 ~~~~ivvalgGnal~~~g~~~~~~~q~~~v~~~a~~i~~~~~~g~~vvi~hGnGPQVG~i~~~~~~~~-~~~~~~pld~~ 82 (317)
T 3kzf_A 4 AGKTVVIALGGNAMLQAKEKGDYDTQRKNVEIAASEIYKIHKAGYKVVLTSGNGPQVGAIKLQNQAAA-GVSPEMPLHVC 82 (317)
T ss_dssp CCCEEEEECCSTTTC--CCCCCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHSTT-SSSCCCCHHHH
T ss_pred CCCEEEEEcChhhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHHhcc-ccCCCCCcccc
Confidence 5679999999999965321 111 24789999997665 2322121 112333344
Q ss_pred ---HHHHHHHHHHHHHHHHHHHhCCCCeEEEeccccc--------------------------ccc-ch-----------
Q 021163 142 ---YIGMLATVMNAIFLQATMESIGIPTRVQTAFRMS--------------------------EVA-EP----------- 180 (316)
Q Consensus 142 ---~v~~la~~lna~Lv~~~L~~~Gi~a~~l~~~~~~--------------------------~~~-~~----------- 180 (316)
..++++..++.. +...|...|++....+.++.- ... ++
T Consensus 83 ~A~sqG~igy~l~~a-l~~~l~~~g~~~~v~t~itq~~Vd~~Dpaf~~PtKpiG~~y~~~ea~~~~~~~~~~~~~ed~gr 161 (317)
T 3kzf_A 83 GAMSQGFIGYMMSQA-MDNVFCANNEPANCVTCVTQTLVDPKDQAFTNPTKPVGRFYTEQEAKDLMAANPGKILREDAGR 161 (317)
T ss_dssp HHHHHHHHHHHHHHH-HHHHHHHTTCCCCEEEBCCEEEECTTCGGGTSCCEECC--------------------------
T ss_pred CchhhHHHHHHHHHH-HHHHHHhcCCCCceeEEEEEEEECCCCccccCCCCCcCCCCCHHHHHHHHHhccCCeEeecCCC
Confidence 446677767433 445788888865433333210 000 00
Q ss_pred -------------HHH-HHHHHHHhCCCEEEEeCCCC-------------CCCCCchHHHHHHHHhcCCcEEEEecccCc
Q 021163 181 -------------YIR-RRAVRHLEKGRVVIFAAGTG-------------NPFFTTDTAAALRCAEINAEVVLKATNVDG 233 (316)
Q Consensus 181 -------------~i~-~~l~~lL~~g~IPVv~g~~g-------------~~~~~sD~iAa~LA~~L~Ad~LiilTDVdG 233 (316)
.++ ..+..+|++|.|||+.|+.| ..++++|++|+++|.+|+||+|+|+|||||
T Consensus 162 g~RrvV~sP~P~~iVe~~~I~~LL~~G~IvI~aGGgGiPv~~~~~~~~G~~~~id~D~~Aa~lA~~L~AD~LIiLTDVdG 241 (317)
T 3kzf_A 162 GWRVVVPSPRPLEIVEYGVIKTLIDNNVLVICTNGGGIPCKRENKVISGVDAVIDKDLATSLLAKTLNSDYLMILTDVLN 241 (317)
T ss_dssp CCCCEECCCCEEEETTHHHHHHHHHTTCEEECCGGGCEEEEECSSCEEECSCCCCHHHHHHHHHHHHTCSCEEECCSSSS
T ss_pred CeeeecCCCCCcceECHHHHHHHHHCCCEEEEeCCCCCCcccCCCcccceEEeccHHHHHHHHHHHhCCCEEEEecCCCe
Confidence 022 33567899999966664322 236789999999999999999999999999
Q ss_pred ccccCCCCCCCCceeccccHHHHhhC--------CCCCchHHHHHHHHhC-CCcEEEEeCCCcchHHHHhcCCCcceEEe
Q 021163 234 VYDDNPRRNPNARLLDTLTYQEVTSK--------DLSVMDMTAITLCQEN-NIPVVVFNLNQPGNIAKAIQGERVGTLIG 304 (316)
Q Consensus 234 Vyt~dP~~~p~aklI~~It~~e~~~l--------G~~v~k~~Aa~~a~~~-gI~v~I~ng~~p~~i~~~l~G~~~GT~I~ 304 (316)
||+ ||+ +|++++|++++++|++++ |.|..|++|+..+.+. +.+++|+|+ +.+.++++|+ .||+|.
T Consensus 242 Vy~-dp~-~p~a~~I~~it~~e~~~li~~g~~~~GGM~pKl~AA~~av~~gg~~v~I~s~---~~l~~~l~G~-~GT~I~ 315 (317)
T 3kzf_A 242 ACI-NYK-KPDERKLEEIKLSEILALEKDGHFAAGSMGPKVRAAIEFTQATGKMSIITSL---STAVDALNGK-CGTRII 315 (317)
T ss_dssp CEE-SSS-CSSCEECCEEEHHHHHHHHTTTSCC--CCHHHHHHHHHHHHHHCCCEEECCG---GGHHHHHTTS-SSEEEE
T ss_pred eeC-CCC-CCCCeECcCcCHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCCCeEEEcch---HHHHHHHCCC-CCeEEe
Confidence 999 898 689999999999988753 4567799999988765 567999985 5677899998 899998
Q ss_pred cC
Q 021163 305 GT 306 (316)
Q Consensus 305 ~~ 306 (316)
++
T Consensus 316 ~d 317 (317)
T 3kzf_A 316 KD 317 (317)
T ss_dssp CC
T ss_pred cC
Confidence 64
No 43
>3s6k_A Acetylglutamate kinase; synthase, transferase; 2.80A {Xanthomonas campestris PV}
Probab=99.88 E-value=1.9e-24 Score=215.07 Aligned_cols=211 Identities=18% Similarity=0.224 Sum_probs=154.3
Q ss_pred CCCeEEEEECccccccCCCCC----------CCCCeEEEEChhHHHHHHH-Hccc-----CCCC---ccHHHHHHHHHHH
Q 021163 89 KWQRVLLKVSGEALAGDHTQN----------IDPKVAIVVGGGNIFRGAS-AAGN-----SGLD---RSSADYIGMLATV 149 (316)
Q Consensus 89 ~~k~iVIKiGGS~i~~~~~~~----------~~~~vVIVhGGG~~a~G~~-~l~~-----~gl~---~~~~d~v~~la~~ 149 (316)
..+++|||+||+++.++- .. +..++|||||||++++..- .++. .|++ +..++.+.+..+.
T Consensus 60 ~~~~iViK~GG~v~~~~l-~~va~dI~~l~~~G~~~VvVHGgg~~i~~~l~~~gi~~~f~~G~RvTd~~~l~vv~~~~g~ 138 (467)
T 3s6k_A 60 AKRFAVVKVGGAVLRDDL-EALTSSLSFLQEVGLTPIVLHGAGPQLDAELSAAGIEKQTVNGLRVTSPHALAIVRKVFQA 138 (467)
T ss_dssp STTSCCCCCCHHHHTTCC-HHHHHHHHHHHTTSCCCCCCCCCCHHHHHHHHTTSCCCCCCSSSCCBCHHHHHHHHHHHHH
T ss_pred CCcEEEEEEChHHhhhHH-HHHHHHHHHHHHCCCcEEEEECCChHHHHHHHHcCCCccccCCccCCCHHHHHHHHHHHHH
Confidence 357899999999776541 11 2347899999999977652 2221 2332 2235666664458
Q ss_pred HHHHHHHHHHHhCCCCeEEEec--cccc-----ccc---c-hHHH-HHHHHHHhCCCEEEEeCC--C--C-CCCCCchHH
Q 021163 150 MNAIFLQATMESIGIPTRVQTA--FRMS-----EVA---E-PYIR-RRAVRHLEKGRVVIFAAG--T--G-NPFFTTDTA 212 (316)
Q Consensus 150 lna~Lv~~~L~~~Gi~a~~l~~--~~~~-----~~~---~-~~i~-~~l~~lL~~g~IPVv~g~--~--g-~~~~~sD~i 212 (316)
+|..|++ +|+++|++++++++ +... +.. + ..++ +.+..+|+.|.|||+++. . | ..++++|++
T Consensus 139 vn~~Lv~-aL~~~G~~Av~lsg~~~~a~~~~~~d~g~~G~I~~v~~~~i~~lL~~g~IpVi~pvg~~~~G~~~~i~~D~~ 217 (467)
T 3s6k_A 139 SNLKLVE-ALQQNGARATSITGGVFEAEYLNRDTYGLVGEVKAVNLAPIEASLQAGSIPVITSLGETPSGQILNVNADFA 217 (467)
T ss_dssp HHHHHHH-HHHHHTCCBCCCCSSSBCCCBSCSSSSBSBBCCCCBCCHHHHTHHHHTCBCCCCSCCCCSSSCCCBCCHHHH
T ss_pred HHHHHHH-HHHhCCCCceEEcCccEEEEeccCcccCccceEEEEcHHHHHHHHHCCCEEEEECceECCCCcEEecCHHHH
Confidence 9999886 89999999998765 2111 111 1 0122 346779999999999953 2 2 346789999
Q ss_pred HHHHHHhcCCcEEEEecccCcccccCCCCCCCCceeccccHH-HHhhC-------CCCCchHHHHHHHHhCCCcEEEEeC
Q 021163 213 AALRCAEINAEVVLKATNVDGVYDDNPRRNPNARLLDTLTYQ-EVTSK-------DLSVMDMTAITLCQENNIPVVVFNL 284 (316)
Q Consensus 213 Aa~LA~~L~Ad~LiilTDVdGVyt~dP~~~p~aklI~~It~~-e~~~l-------G~~v~k~~Aa~~a~~~gI~v~I~ng 284 (316)
|+.+|.+|+|++|+++|||||||++ ++++|++|+.. |+.++ |.|..|++|+..|.+.+.+++++++
T Consensus 218 Aa~lA~~L~Ad~LiilTdv~Gv~~~------~~~lI~~i~~~~e~~~l~~~~~~tGGM~~Kl~aa~~a~~gv~~~~iv~g 291 (467)
T 3s6k_A 218 ANELVQELQPYKIIFLTGTGGLLDA------EGKLIDSINLSTEYDHLMQQPWINGGMRVKIEQIKDLLDRLPLESSVSI 291 (467)
T ss_dssp HHHHHHHHCCSSCCCCCSSCSCCCS------SCCCCCCCCTTTTTHHHHTSSSCCSHHHHHHHHHHHHHTTSCSSCCBCC
T ss_pred HHHHHHhcCCCEEEEEecccceeCC------CCCCccccChHHHHHHHHhcCCCCCchHHHHHHHHHHHhCCCcEEEEEe
Confidence 9999999999999999999999985 36889999874 44332 4567799999998885446899999
Q ss_pred CCcchHH-HHhcCCCcceEEecCC
Q 021163 285 NQPGNIA-KAIQGERVGTLIGGTW 307 (316)
Q Consensus 285 ~~p~~i~-~~l~G~~~GT~I~~~~ 307 (316)
..|+.+. +++.++.+||.|.+..
T Consensus 292 ~~~~~Ll~eLft~~g~GT~i~~~e 315 (467)
T 3s6k_A 292 TRPADLAKELFTHKGSGTLVRRGE 315 (467)
T ss_dssp CCTTTHHHHHHSSCTTSCCBCCCC
T ss_pred CCchHHHHHHhcCCCcceEEeCCC
Confidence 9999986 5778888999998763
No 44
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=61.79 E-value=7.4 Score=32.03 Aligned_cols=60 Identities=22% Similarity=0.350 Sum_probs=34.3
Q ss_pred EEecccCcccccCC-CCCCCCceeccccHHHHhhCCCCCchHHHHHHHHhCCCcEEEEeCCCcchHHHHhc
Q 021163 226 LKATNVDGVYDDNP-RRNPNARLLDTLTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQ 295 (316)
Q Consensus 226 iilTDVdGVyt~dP-~~~p~aklI~~It~~e~~~lG~~v~k~~Aa~~a~~~gI~v~I~ng~~p~~i~~~l~ 295 (316)
.++.|+||.+..+- ...++.+.+.++... ..++++.+.+.|+++.|+.++....+..+++
T Consensus 10 ~i~~DlDGTL~~~~~~~~~~~~~~~~~~~~----------~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~ 70 (180)
T 1k1e_A 10 FVITDVDGVLTDGQLHYDANGEAIKSFHVR----------DGLGIKMLMDADIQVAVLSGRDSPILRRRIA 70 (180)
T ss_dssp EEEEECTTTTSCSEEEEETTEEEEEEEEHH----------HHHHHHHHHHTTCEEEEEESCCCHHHHHHHH
T ss_pred EEEEeCCCCcCCCCeeeccCcceeeeeccc----------hHHHHHHHHHCCCeEEEEeCCCcHHHHHHHH
Confidence 46789999886421 111123344444432 2346666677788877777776655555443
No 45
>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}
Probab=61.71 E-value=11 Score=31.27 Aligned_cols=58 Identities=16% Similarity=0.247 Sum_probs=35.1
Q ss_pred EEecccCcccccCCCC-CCCCceeccccHHHHhhCCCCCchHHHHHHHHhCCCcEEEEeCCCcchHHHHhc
Q 021163 226 LKATNVDGVYDDNPRR-NPNARLLDTLTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQ 295 (316)
Q Consensus 226 iilTDVdGVyt~dP~~-~p~aklI~~It~~e~~~lG~~v~k~~Aa~~a~~~gI~v~I~ng~~p~~i~~~l~ 295 (316)
.+++|+||++++.-.. .++.+.+..++.. +..+++.+.+.|+++.|+.+. .....+++
T Consensus 11 liv~D~DGtL~d~~~~~~~~g~~~~~f~~~----------D~~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~ 69 (168)
T 3ewi_A 11 LLVCNIDGCLTNGHIYVSGDQKEIISYDVK----------DAIGISLLKKSGIEVRLISER--ACSKQTLS 69 (168)
T ss_dssp EEEEECCCCCSCSCCBCCSSCCCEEEEEHH----------HHHHHHHHHHTTCEEEEECSS--CCCHHHHH
T ss_pred EEEEeCccceECCcEEEcCCCCEEEEEecC----------cHHHHHHHHHCCCEEEEEeCc--HHHHHHHH
Confidence 5788999999853211 1233334444332 344677777888888888776 34444554
No 46
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=56.50 E-value=11 Score=29.99 Aligned_cols=60 Identities=18% Similarity=0.272 Sum_probs=30.3
Q ss_pred EEecccCcccccCCC-CCCCCceeccccHHHHhhCCCCCchHHHHHHHHhCCCcEEEEeCCCcchHHHHhc
Q 021163 226 LKATNVDGVYDDNPR-RNPNARLLDTLTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQ 295 (316)
Q Consensus 226 iilTDVdGVyt~dP~-~~p~aklI~~It~~e~~~lG~~v~k~~Aa~~a~~~gI~v~I~ng~~p~~i~~~l~ 295 (316)
.++.|.||.+..... ..+..+.++.+... ..++++.+.+.|+++.|++++....+..+++
T Consensus 11 ~v~~DlDGTL~~~~~~~~~~~~~~~~~~~~----------~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~ 71 (162)
T 2p9j_A 11 LLIMDIDGVLTDGKLYYTEHGETIKVFNVL----------DGIGIKLLQKMGITLAVISGRDSAPLITRLK 71 (162)
T ss_dssp EEEECCTTTTSCSEEEEETTEEEEEEEEHH----------HHHHHHHHHTTTCEEEEEESCCCHHHHHHHH
T ss_pred EEEEecCcceECCceeecCCCceeeeeccc----------HHHHHHHHHHCCCEEEEEeCCCcHHHHHHHH
Confidence 468899998764211 11122333333322 1344555555666666666655554444443
No 47
>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}
Probab=37.97 E-value=49 Score=28.85 Aligned_cols=29 Identities=10% Similarity=0.045 Sum_probs=22.4
Q ss_pred HHHHHHHHhCCCcEEEEeCCCcchHHHHh
Q 021163 266 MTAITLCQENNIPVVVFNLNQPGNIAKAI 294 (316)
Q Consensus 266 ~~Aa~~a~~~gI~v~I~ng~~p~~i~~~l 294 (316)
.+|++.+.+.|+.+.|+.|+.+..+..++
T Consensus 44 ~~al~~l~~~G~~v~iaTGR~~~~~~~~~ 72 (285)
T 3pgv_A 44 KETLKLLTARGINFVFATGRHYIDVGQIR 72 (285)
T ss_dssp HHHHHHHHTTTCEEEEECSSCGGGGHHHH
T ss_pred HHHHHHHHHCCCEEEEEcCCCHHHHHHHH
Confidence 34666777889999999998887776655
No 48
>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*
Probab=36.41 E-value=60 Score=28.12 Aligned_cols=51 Identities=14% Similarity=0.025 Sum_probs=36.3
Q ss_pred EEecccCcccccCCCCCCCCceeccccHHHHhhCCCCCchHHHHHHHHhCCCcEEEEeCCCcchHHHHhc
Q 021163 226 LKATNVDGVYDDNPRRNPNARLLDTLTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQ 295 (316)
Q Consensus 226 iilTDVdGVyt~dP~~~p~aklI~~It~~e~~~lG~~v~k~~Aa~~a~~~gI~v~I~ng~~p~~i~~~l~ 295 (316)
++++|.||-+..+ + + +++.. -.++++.+.+.|+++.|+.|+.+..+.+.+.
T Consensus 6 li~~DlDGTLl~~-----~-~---~i~~~----------~~~~l~~l~~~g~~~~iaTGR~~~~~~~~l~ 56 (246)
T 3f9r_A 6 LLLFDVDGTLTPP-----R-L---CQTDE----------MRALIKRARGAGFCVGTVGGSDFAKQVEQLG 56 (246)
T ss_dssp EEEECSBTTTBST-----T-S---CCCHH----------HHHHHHHHHHTTCEEEEECSSCHHHHHHHHC
T ss_pred EEEEeCcCCcCCC-----C-C---ccCHH----------HHHHHHHHHHCCCEEEEECCCCHHHHHHHhh
Confidence 5789999966432 1 1 23322 2346778888999999999999888877665
No 49
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=35.74 E-value=38 Score=27.82 Aligned_cols=58 Identities=19% Similarity=0.211 Sum_probs=28.8
Q ss_pred EecccCcccccCC-CCCCCCceeccccHHHHhhCCCCCchHHHHHHHHhCCCcEEEEeCCCcchHHHHh
Q 021163 227 KATNVDGVYDDNP-RRNPNARLLDTLTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAI 294 (316)
Q Consensus 227 ilTDVdGVyt~dP-~~~p~aklI~~It~~e~~~lG~~v~k~~Aa~~a~~~gI~v~I~ng~~p~~i~~~l 294 (316)
++.|.||++...- ...++...+..+... +..+++.+.+.|+++.|++++....+..++
T Consensus 29 vifD~DGTL~~~~~~~~~~~~~~~~~~~~----------d~~~l~~L~~~g~~v~ivT~~~~~~~~~~l 87 (188)
T 2r8e_A 29 LILDVDGVLSDGLIYMGNNGEELKAFNVR----------DGYGIRCALTSDIEVAIITGRKAKLVEDRC 87 (188)
T ss_dssp EEECCCCCCBCSEEEEETTSCEEEEEEHH----------HHHHHHHHHTTTCEEEEECSSCCHHHHHHH
T ss_pred EEEeCCCCcCCCCEEecCCCcEEEEeecc----------cHHHHHHHHHCCCeEEEEeCCChHHHHHHH
Confidence 4679999887411 011122233333222 222455555666776666665554444444
No 50
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=35.71 E-value=1.1e+02 Score=25.65 Aligned_cols=68 Identities=18% Similarity=0.057 Sum_probs=43.6
Q ss_pred HHHHHHHHHHhCCCCeEEEeccccccccchHHHHHHHHHHhCCCEEEEeCCCCCCCCCchHHHHHHHHhcCCc
Q 021163 151 NAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAE 223 (316)
Q Consensus 151 na~Lv~~~L~~~Gi~a~~l~~~~~~~~~~~~i~~~l~~lL~~g~IPVv~g~~g~~~~~sD~iAa~LA~~L~Ad 223 (316)
|...+++.|.+.|+.+....... |- ...+.+.+.++++...+.|+.|+. ....-|.+...+|..++.+
T Consensus 24 N~~~l~~~L~~~G~~v~~~~iv~--Dd-~~~I~~~l~~a~~~~DlVittGG~--g~~~~D~T~ea~a~~~~~~ 91 (172)
T 3kbq_A 24 NAAFIGNFLTYHGYQVRRGFVVM--DD-LDEIGWAFRVALEVSDLVVSSGGL--GPTFDDMTVEGFAKCIGQD 91 (172)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEEC--SC-HHHHHHHHHHHHHHCSEEEEESCC--SSSTTCCHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHCCCEEEEEEEeC--CC-HHHHHHHHHHHHhcCCEEEEcCCC--cCCcccchHHHHHHHcCCC
Confidence 44456678888999876432221 11 112334455666667788888763 3456799999999999966
No 51
>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0
Probab=34.50 E-value=77 Score=26.86 Aligned_cols=51 Identities=27% Similarity=0.399 Sum_probs=33.7
Q ss_pred EEecccCcccccCCCCCCCCceeccccHHHHhhCCCCCchHHHHHHHHhCCCcEEEEeCCCcchHHHHhc
Q 021163 226 LKATNVDGVYDDNPRRNPNARLLDTLTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQ 295 (316)
Q Consensus 226 iilTDVdGVyt~dP~~~p~aklI~~It~~e~~~lG~~v~k~~Aa~~a~~~gI~v~I~ng~~p~~i~~~l~ 295 (316)
.+++|.||-+-++ + + .++.. -.++++.+.+.|+.+.++.|+.+..+..++.
T Consensus 7 li~fDlDGTLl~~-----~-~---~i~~~----------~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~ 57 (274)
T 3fzq_A 7 LLILDIDGTLRDE-----V-Y---GIPES----------AKHAIRLCQKNHCSVVICTGRSMGTIQDDVL 57 (274)
T ss_dssp EEEECSBTTTBBT-----T-T---BCCHH----------HHHHHHHHHHTTCEEEEECSSCTTTSCHHHH
T ss_pred EEEEECCCCCCCC-----C-C---cCCHH----------HHHHHHHHHHCCCEEEEEeCCChHHHHHHHH
Confidence 4688999965432 1 1 23222 2356667788899999999998877666553
No 52
>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A
Probab=32.68 E-value=65 Score=27.38 Aligned_cols=27 Identities=11% Similarity=0.106 Sum_probs=19.5
Q ss_pred HHHHHHHhCCCcEEEEeCCCcchHHHH
Q 021163 267 TAITLCQENNIPVVVFNLNQPGNIAKA 293 (316)
Q Consensus 267 ~Aa~~a~~~gI~v~I~ng~~p~~i~~~ 293 (316)
++++.+.+.|+++.++.|+....+..+
T Consensus 27 ~al~~l~~~G~~~~~aTGR~~~~~~~~ 53 (258)
T 2pq0_A 27 EAVRRLKQSGVYVAIATGRAPFMFEHV 53 (258)
T ss_dssp HHHHHHHHTTCEEEEECSSCGGGSHHH
T ss_pred HHHHHHHHCCCEEEEECCCChHHHHHH
Confidence 456667778888888888877665544
No 53
>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10
Probab=32.17 E-value=41 Score=29.48 Aligned_cols=51 Identities=18% Similarity=0.189 Sum_probs=35.0
Q ss_pred EEecccCcccccCCCCCCCCceeccccHHHHhhCCCCCchHHHHHHHHhCCCcEEEEeCCCcchHHHHhc
Q 021163 226 LKATNVDGVYDDNPRRNPNARLLDTLTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQ 295 (316)
Q Consensus 226 iilTDVdGVyt~dP~~~p~aklI~~It~~e~~~lG~~v~k~~Aa~~a~~~gI~v~I~ng~~p~~i~~~l~ 295 (316)
++++|.||-+-.+ + + +++.+ -.++++.+.+.|+.++|+.|+....+..++.
T Consensus 7 li~~DlDGTLl~~-----~-~---~i~~~----------~~~aL~~l~~~Gi~vviaTGR~~~~~~~~~~ 57 (282)
T 1rkq_A 7 LIAIDMDGTLLLP-----D-H---TISPA----------VKNAIAAARARGVNVVLTTGRPYAGVHNYLK 57 (282)
T ss_dssp EEEECCCCCCSCT-----T-S---CCCHH----------HHHHHHHHHHTTCEEEEECSSCGGGTHHHHH
T ss_pred EEEEeCCCCCCCC-----C-C---cCCHH----------HHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH
Confidence 5789999966432 1 1 23332 2356777788999999999998887766543
No 54
>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A
Probab=29.51 E-value=84 Score=26.89 Aligned_cols=30 Identities=17% Similarity=0.093 Sum_probs=23.2
Q ss_pred HHHHHHHHhCCCcEEEEeCCCcchHHHHhc
Q 021163 266 MTAITLCQENNIPVVVFNLNQPGNIAKAIQ 295 (316)
Q Consensus 266 ~~Aa~~a~~~gI~v~I~ng~~p~~i~~~l~ 295 (316)
.++++.+.+.|+.+.++.|+....+..++.
T Consensus 28 ~~al~~l~~~G~~~~iaTGR~~~~~~~~~~ 57 (279)
T 4dw8_A 28 RETLIRIQEQGIRLVLASGRPTYGIVPLAN 57 (279)
T ss_dssp HHHHHHHHHTTCEEEEECSSCHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEcCCChHHHHHHHH
Confidence 456677788899999999998877766553
No 55
>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*
Probab=28.50 E-value=67 Score=27.75 Aligned_cols=52 Identities=15% Similarity=0.151 Sum_probs=33.9
Q ss_pred EEEEecccCcccccCCCCCCCCceeccccHHHHhhCCCCCchHHHHHHHHhCCCcEEEEeCCCcchHHHHhc
Q 021163 224 VVLKATNVDGVYDDNPRRNPNARLLDTLTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQ 295 (316)
Q Consensus 224 ~LiilTDVdGVyt~dP~~~p~aklI~~It~~e~~~lG~~v~k~~Aa~~a~~~gI~v~I~ng~~p~~i~~~l~ 295 (316)
.-++++|.||=+-.+ + + +|+.. -.+|++.+.+. +.++|+.|+....+.+.+.
T Consensus 13 ~kli~~DlDGTLl~~-----~-~---~is~~----------~~~al~~l~~~-i~v~iaTGR~~~~~~~~l~ 64 (262)
T 2fue_A 13 RVLCLFDVDGTLTPA-----R-Q---KIDPE----------VAAFLQKLRSR-VQIGVVGGSDYCKIAEQLG 64 (262)
T ss_dssp CEEEEEESBTTTBST-----T-S---CCCHH----------HHHHHHHHTTT-SEEEEECSSCHHHHHHHHS
T ss_pred eEEEEEeCccCCCCC-----C-C---cCCHH----------HHHHHHHHHhC-CEEEEEcCCCHHHHHHHHh
Confidence 356789999944321 1 1 23332 23566666777 9999999998877766654
No 56
>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0
Probab=26.64 E-value=77 Score=27.32 Aligned_cols=30 Identities=17% Similarity=0.138 Sum_probs=22.3
Q ss_pred HHHHHHHHhCCCcEEEEeCCCcchHHHHhc
Q 021163 266 MTAITLCQENNIPVVVFNLNQPGNIAKAIQ 295 (316)
Q Consensus 266 ~~Aa~~a~~~gI~v~I~ng~~p~~i~~~l~ 295 (316)
.++++.+.+.|+.+.++.|+.+..+..++.
T Consensus 29 ~~al~~l~~~G~~~~iaTGR~~~~~~~~~~ 58 (290)
T 3dnp_A 29 KDAIEYVKKKGIYVTLVTNRHFRSAQKIAK 58 (290)
T ss_dssp HHHHHHHHHTTCEEEEBCSSCHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEECCCChHHHHHHHH
Confidence 346667778899999999988877765553
No 57
>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A
Probab=26.54 E-value=77 Score=26.91 Aligned_cols=51 Identities=14% Similarity=0.144 Sum_probs=33.7
Q ss_pred EEEecccCcccccCCCCCCCCceeccccHHHHhhCCCCCchHHHHHHHHhCCCcEEEEeCCCcchHHHHhc
Q 021163 225 VLKATNVDGVYDDNPRRNPNARLLDTLTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQ 295 (316)
Q Consensus 225 LiilTDVdGVyt~dP~~~p~aklI~~It~~e~~~lG~~v~k~~Aa~~a~~~gI~v~I~ng~~p~~i~~~l~ 295 (316)
-++++|.||=+-.+ + + +|+.. -.+|++.+.+. +.+.|+.||....+.+.+.
T Consensus 7 kli~~DlDGTLl~~-----~-~---~i~~~----------~~~al~~l~~~-i~v~iaTGR~~~~~~~~l~ 57 (246)
T 2amy_A 7 ALCLFDVDGTLTAP-----R-Q---KITKE----------MDDFLQKLRQK-IKIGVVGGSDFEKVQEQLG 57 (246)
T ss_dssp EEEEEESBTTTBCT-----T-S---CCCHH----------HHHHHHHHTTT-SEEEEECSSCHHHHHHHHC
T ss_pred eEEEEECCCCcCCC-----C-c---ccCHH----------HHHHHHHHHhC-CeEEEEcCCCHHHHHHHhc
Confidence 46789999955322 1 1 23332 23566677777 9999999998877766664
No 58
>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15
Probab=25.98 E-value=58 Score=27.83 Aligned_cols=29 Identities=14% Similarity=0.222 Sum_probs=23.1
Q ss_pred HHHHHHHHhCCCcEEEEeCCCcchHHHHhc
Q 021163 266 MTAITLCQENNIPVVVFNLNQPGNIAKAIQ 295 (316)
Q Consensus 266 ~~Aa~~a~~~gI~v~I~ng~~p~~i~~~l~ 295 (316)
.++++.+.+.| .++|+.|+.+..+..++.
T Consensus 29 ~~al~~l~~~g-~v~iaTGR~~~~~~~~~~ 57 (239)
T 1u02_A 29 LSLISDLKERF-DTYIVTGRSPEEISRFLP 57 (239)
T ss_dssp HHHHHHHHHHS-EEEEECSSCHHHHHHHSC
T ss_pred HHHHHHHhcCC-CEEEEeCCCHHHHHHHhc
Confidence 45666777889 999999999888877664
No 59
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=25.76 E-value=1.4e+02 Score=24.47 Aligned_cols=28 Identities=14% Similarity=0.268 Sum_probs=17.4
Q ss_pred HHHHHHhCCCcEEEEeCCCcchHHHHhc
Q 021163 268 AITLCQENNIPVVVFNLNQPGNIAKAIQ 295 (316)
Q Consensus 268 Aa~~a~~~gI~v~I~ng~~p~~i~~~l~ 295 (316)
+++.+.+.|+++.|+.+.....+...++
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~ 81 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRME 81 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHH
Confidence 5666667777777777665555544443
No 60
>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10
Probab=25.59 E-value=97 Score=26.94 Aligned_cols=30 Identities=17% Similarity=0.259 Sum_probs=23.9
Q ss_pred HHHHHHHHhCCCcEEEEeCCCcchHHHHhc
Q 021163 266 MTAITLCQENNIPVVVFNLNQPGNIAKAIQ 295 (316)
Q Consensus 266 ~~Aa~~a~~~gI~v~I~ng~~p~~i~~~l~ 295 (316)
.++++.+.+.|+++.|+.|+....+..++.
T Consensus 32 ~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~ 61 (275)
T 1xvi_A 32 APWLTRLREANVPVILCSSKTSAEMLYLQK 61 (275)
T ss_dssp HHHHHHHHHTTCCEEEECSSCHHHHHHHHH
T ss_pred HHHHHHHHHCCCeEEEEcCCCHHHHHHHHH
Confidence 466777788999999999998887766553
No 61
>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*
Probab=24.71 E-value=79 Score=24.77 Aligned_cols=59 Identities=17% Similarity=0.273 Sum_probs=29.2
Q ss_pred EecccCcccccCC-CCCCCCceeccccHHHHhhCCCCCchHHHHHHHHhCCCcEEEEeCCCcchHHHHhc
Q 021163 227 KATNVDGVYDDNP-RRNPNARLLDTLTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQ 295 (316)
Q Consensus 227 ilTDVdGVyt~dP-~~~p~aklI~~It~~e~~~lG~~v~k~~Aa~~a~~~gI~v~I~ng~~p~~i~~~l~ 295 (316)
++.|.||.+.+.- ...+..+.+.++.. .+..+++.+.+.|+++.|+.+........+++
T Consensus 7 vifD~DGTL~~~~~~~~~~~~~~~~~~~----------~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~ 66 (164)
T 3e8m_A 7 ILTDIDGVWTDGGMFYDQTGNEWKKFNT----------SDSAGIFWAHNKGIPVGILTGEKTEIVRRRAE 66 (164)
T ss_dssp EEECSTTTTSSSEEEECSSSCEEEEEEG----------GGHHHHHHHHHTTCCEEEECSSCCHHHHHHHH
T ss_pred EEEcCCCceEcCcEEEcCCCcEEEEecC----------ChHHHHHHHHHCCCEEEEEeCCChHHHHHHHH
Confidence 5679999886421 00111222222211 12235555666677766666655555444443
No 62
>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A
Probab=23.78 E-value=84 Score=25.73 Aligned_cols=28 Identities=4% Similarity=0.177 Sum_probs=20.5
Q ss_pred HHHHHHhCCCcEEEEeCCCcchHHHHhc
Q 021163 268 AITLCQENNIPVVVFNLNQPGNIAKAIQ 295 (316)
Q Consensus 268 Aa~~a~~~gI~v~I~ng~~p~~i~~~l~ 295 (316)
+++.+.+.|+++.|+.+.....+..+++
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~ 81 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAK 81 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHH
Confidence 6777778888888888776666665554
No 63
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=23.52 E-value=1.4e+02 Score=23.97 Aligned_cols=60 Identities=13% Similarity=0.182 Sum_probs=30.6
Q ss_pred EEecccCcccccCCCCC-CCCceeccccHHHHhhCCCCCchHHHHHHHHhCCCcEEEEeCCCcchHHHHhc
Q 021163 226 LKATNVDGVYDDNPRRN-PNARLLDTLTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQ 295 (316)
Q Consensus 226 iilTDVdGVyt~dP~~~-p~aklI~~It~~e~~~lG~~v~k~~Aa~~a~~~gI~v~I~ng~~p~~i~~~l~ 295 (316)
.++.|.||.+.++.-.. ...+.+..+... +..+++.+.+.|+++.|+.+.....+..+++
T Consensus 14 ~vifD~DGTL~d~~~~~~~~~~~~~~~~~~----------~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~ 74 (176)
T 3mmz_A 14 AVVLDFDGTQTDDRVLIDSDGREFVSVHRG----------DGLGIAALRKSGLTMLILSTEQNPVVAARAR 74 (176)
T ss_dssp EEEECCTTTTSCSCCEECTTCCEEEEEEHH----------HHHHHHHHHHTTCEEEEEESSCCHHHHHHHH
T ss_pred EEEEeCCCCcCcCCEeecCCccHhHhcccc----------cHHHHHHHHHCCCeEEEEECcChHHHHHHHH
Confidence 35779999887522110 011223333222 1225556666777777776665555554443
No 64
>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}
Probab=22.86 E-value=1.2e+02 Score=25.35 Aligned_cols=31 Identities=6% Similarity=0.141 Sum_probs=20.4
Q ss_pred hHHHHHHHHhCCCcEEEEeCCCcchHHHHhc
Q 021163 265 DMTAITLCQENNIPVVVFNLNQPGNIAKAIQ 295 (316)
Q Consensus 265 k~~Aa~~a~~~gI~v~I~ng~~p~~i~~~l~ 295 (316)
+..+++.+.+.|+++.|+.+.....+..+++
T Consensus 57 d~~~l~~L~~~G~~~~ivT~~~~~~~~~~l~ 87 (195)
T 3n07_A 57 DGYGVKALMNAGIEIAIITGRRSQIVENRMK 87 (195)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCCHHHHHHHH
T ss_pred cHHHHHHHHHCCCEEEEEECcCHHHHHHHHH
Confidence 4455667777788877777766655555554
No 65
>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10
Probab=21.89 E-value=1e+02 Score=27.37 Aligned_cols=51 Identities=18% Similarity=0.148 Sum_probs=33.9
Q ss_pred EEecccCcccccCCCCCCCCceeccccHHHHhhCCCCCchHHHHHHHHhCCCcEEEEeCCCcchHHHHh
Q 021163 226 LKATNVDGVYDDNPRRNPNARLLDTLTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAI 294 (316)
Q Consensus 226 iilTDVdGVyt~dP~~~p~aklI~~It~~e~~~lG~~v~k~~Aa~~a~~~gI~v~I~ng~~p~~i~~~l 294 (316)
++++|.||-+-.+. + + +++.. -.++++.+.+.|+.++|+.|+....+..++
T Consensus 29 li~~DlDGTLl~~~----~-~---~is~~----------~~~al~~l~~~Gi~v~iaTGR~~~~~~~~~ 79 (301)
T 2b30_A 29 LLLIDFDGTLFVDK----D-I---KVPSE----------NIDAIKEAIEKGYMVSICTGRSKVGILSAF 79 (301)
T ss_dssp EEEEETBTTTBCCT----T-T---CSCHH----------HHHHHHHHHHHTCEEEEECSSCHHHHHHHH
T ss_pred EEEEECCCCCcCCC----C-C---ccCHH----------HHHHHHHHHHCCCEEEEEcCCCHHHHHHHh
Confidence 57899999665320 1 1 23322 235666777889999999999887776555
Done!