BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021167
(316 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359476106|ref|XP_002282454.2| PREDICTED: tRNA (cytosine-5-)-methyltransferase-like [Vitis
vinifera]
Length = 393
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 235/315 (74%), Positives = 261/315 (82%), Gaps = 4/315 (1%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
Y AHAWLLSPPCQPYTRQGLQK S DARAFSFLKILELI HT+ PP MLFVENVVGFETS
Sbjct: 77 YRAHAWLLSPPCQPYTRQGLQKHSGDARAFSFLKILELIQHTLHPPLMLFVENVVGFETS 136
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSP 121
DTH KMIEIL+ + ++TQEFILSP+QFGVPYSRPRYFCLAKRKPLSF QL NNQLL +P
Sbjct: 137 DTHEKMIEILSKTGFVTQEFILSPIQFGVPYSRPRYFCLAKRKPLSFENQLFNNQLLSTP 196
Query: 122 SPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVD 181
SPL G++D ++I +HDQ + WDKLL+SC+PVERFLEF N+ + + TE+ +L T + + D
Sbjct: 197 SPLFGHEDDSLIDEHDQSEKIWDKLLQSCEPVERFLEFKNTINPLETESSYLDTLSVSTD 256
Query: 182 DFGAAEETVEVDR--CVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGT 239
G E E DR S D F VPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGT
Sbjct: 257 ASGELENN-ERDRSDSNSWDQFSVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGT 315
Query: 240 GSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSL 299
GSLLAT Q K K KAS L+EQ LRYFTPREVANLHSFP DF FP H++LRQRYALLGNSL
Sbjct: 316 GSLLATGQSK-KDKASLLEEQCLRYFTPREVANLHSFPEDFHFPQHVNLRQRYALLGNSL 374
Query: 300 SIAVVAPLLQYLFAQ 314
S+AVVAPLL YLF Q
Sbjct: 375 SVAVVAPLLTYLFTQ 389
>gi|224092438|ref|XP_002309610.1| DNA methyltransferase [Populus trichocarpa]
gi|222855586|gb|EEE93133.1| DNA methyltransferase [Populus trichocarpa]
Length = 350
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 226/313 (72%), Positives = 251/313 (80%), Gaps = 27/313 (8%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
YGAH WLLSPPCQPYTRQGLQKQS DARAFSFLKILELIPHT +PP+MLFVENVVGFETS
Sbjct: 65 YGAHTWLLSPPCQPYTRQGLQKQSGDARAFSFLKILELIPHTKQPPNMLFVENVVGFETS 124
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSP 121
DT AKMIEILA+S+Y+TQEFILSPLQFGVPYSRPRYFCLAKRKPLSF ++ NN+LL SP
Sbjct: 125 DTRAKMIEILASSEYITQEFILSPLQFGVPYSRPRYFCLAKRKPLSFHHEVCNNKLLWSP 184
Query: 122 SPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVD 181
SPL +++ V DQP +WD L+ SC+PVERFLEF +S ++V TG D
Sbjct: 185 SPLFEHNENNVTDGWDQPPVNWDTLIHSCEPVERFLEFKSSSNRV--------TGGTGTD 236
Query: 182 DFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGS 241
++VPLSLIERW SAMDIVYPDSKRCCCFTKSYYRYVKGTGS
Sbjct: 237 -------------------YIVPLSLIERWESAMDIVYPDSKRCCCFTKSYYRYVKGTGS 277
Query: 242 LLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSI 301
LLAT+QP KGK SSLK+Q LRYFTPREVANLHSFP DFQFP +SLRQ YALLGNSLS+
Sbjct: 278 LLATIQPNIKGKESSLKKQGLRYFTPREVANLHSFPDDFQFPEAISLRQCYALLGNSLSV 337
Query: 302 AVVAPLLQYLFAQ 314
AVVAPLL+YLF+Q
Sbjct: 338 AVVAPLLRYLFSQ 350
>gi|296081999|emb|CBI21004.3| unnamed protein product [Vitis vinifera]
Length = 366
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 226/313 (72%), Positives = 249/313 (79%), Gaps = 27/313 (8%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
Y AHAWLLSPPCQPYTRQGLQK S DARAFSFLKILELI HT+ PP MLFVENVVGFETS
Sbjct: 77 YRAHAWLLSPPCQPYTRQGLQKHSGDARAFSFLKILELIQHTLHPPLMLFVENVVGFETS 136
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSP 121
DTH KMIEIL+ + ++TQEFILSP+QFGVPYSRPRYFCLAKRKPLSF QL NNQLL +P
Sbjct: 137 DTHEKMIEILSKTGFVTQEFILSPIQFGVPYSRPRYFCLAKRKPLSFENQLFNNQLLSTP 196
Query: 122 SPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVD 181
SPL G++D ++I +HDQ + WDKLL+SC+PVERFLEF N+ + + T+
Sbjct: 197 SPLFGHEDDSLIDEHDQSEKIWDKLLQSCEPVERFLEFKNTINPLETDN----------- 245
Query: 182 DFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGS 241
S D F VPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGS
Sbjct: 246 ---------------SWDQFSVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGS 290
Query: 242 LLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSI 301
LLAT Q K K KAS L+EQ LRYFTPREVANLHSFP DF FP H++LRQRYALLGNSLS+
Sbjct: 291 LLATGQSK-KDKASLLEEQCLRYFTPREVANLHSFPEDFHFPQHVNLRQRYALLGNSLSV 349
Query: 302 AVVAPLLQYLFAQ 314
AVVAPLL YLF Q
Sbjct: 350 AVVAPLLTYLFTQ 362
>gi|297812763|ref|XP_002874265.1| DNA methyltransferase-2 [Arabidopsis lyrata subsp. lyrata]
gi|297320102|gb|EFH50524.1| DNA methyltransferase-2 [Arabidopsis lyrata subsp. lyrata]
Length = 383
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 220/312 (70%), Positives = 250/312 (80%), Gaps = 9/312 (2%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
Y A AWLLSPPCQPYTRQGLQKQS DARAFSFL+ILELIPHT KPP +LFVENVVGFETS
Sbjct: 78 YNADAWLLSPPCQPYTRQGLQKQSGDARAFSFLRILELIPHTSKPPQILFVENVVGFETS 137
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSP 121
DTH +MI+ L +Y+TQEFILSPLQFGVPYSRPRYFCLAKRKPL F+ Q NN+LL SP
Sbjct: 138 DTHMEMIDTLTKLNYVTQEFILSPLQFGVPYSRPRYFCLAKRKPLPFKSQHSNNKLLWSP 197
Query: 122 SPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTE-TGFLSTGTAAV 180
SPL G DD + K Q ++ DKLL+ C+PVE+FLE S V+ E + + +
Sbjct: 198 SPLYGCDDQVEVGKC-QAEEGLDKLLQFCEPVEKFLE---SAAHVDGEPSSVDDSENGSK 253
Query: 181 DDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTG 240
D +G +++V S+ +LVP+SLIERWG+AMDIVYPDSKRCCCFTKSYYRYVKGTG
Sbjct: 254 DCYGQEDDSVP----DSVHQYLVPVSLIERWGNAMDIVYPDSKRCCCFTKSYYRYVKGTG 309
Query: 241 SLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLS 300
SLLATVQPK KGK S LKEQ LRYFTPREVAN HSFP DF FP H+SLRQRYA+LGNSLS
Sbjct: 310 SLLATVQPKIKGKESCLKEQRLRYFTPREVANFHSFPEDFVFPKHISLRQRYAMLGNSLS 369
Query: 301 IAVVAPLLQYLF 312
+AVVAPLL+YLF
Sbjct: 370 VAVVAPLLRYLF 381
>gi|18420929|ref|NP_568474.1| DNA methyltransferase-2 [Arabidopsis thaliana]
gi|332006070|gb|AED93453.1| DNA methyltransferase-2 [Arabidopsis thaliana]
Length = 383
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 220/311 (70%), Positives = 240/311 (77%), Gaps = 7/311 (2%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
Y A AWLLSPPCQPYTRQGLQK S DARAFSFL+ILELIPHT KPP MLFVENVVGFETS
Sbjct: 78 YNADAWLLSPPCQPYTRQGLQKHSGDARAFSFLRILELIPHTTKPPQMLFVENVVGFETS 137
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSP 121
DTH +MI L DY+TQEFILSPLQFGVPYSRPRYFCLAKRKPL F+ Q NN+LL SP
Sbjct: 138 DTHMEMIGTLTKLDYVTQEFILSPLQFGVPYSRPRYFCLAKRKPLPFKSQHSNNKLLWSP 197
Query: 122 SPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVD 181
PL G DD K Q ++ DKLLE C PVE+FLE + V+ E +
Sbjct: 198 DPLYGRDDQVEFGKC-QAEEGLDKLLEFCKPVEKFLELAA---HVDGEPSSVDDSENGSK 253
Query: 182 DFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGS 241
D E D S+ +LVP+SLIERWG+AMDIVYPDSKRCCCFTKSYYRYVKGTGS
Sbjct: 254 DCCGQEGDSVPD---SVHQYLVPVSLIERWGNAMDIVYPDSKRCCCFTKSYYRYVKGTGS 310
Query: 242 LLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSI 301
LLATVQPK KGK S LKEQ LRYFTPREVAN HSFP DF+FP H+SLRQRYA+LGNSLS+
Sbjct: 311 LLATVQPKIKGKESCLKEQRLRYFTPREVANFHSFPEDFEFPKHISLRQRYAMLGNSLSV 370
Query: 302 AVVAPLLQYLF 312
AVVAPLL+YLF
Sbjct: 371 AVVAPLLRYLF 381
>gi|255548992|ref|XP_002515552.1| DNA (cytosine-5)-methyltransferase, putative [Ricinus communis]
gi|223545496|gb|EEF47001.1| DNA (cytosine-5)-methyltransferase, putative [Ricinus communis]
Length = 404
Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust.
Identities = 213/309 (68%), Positives = 245/309 (79%), Gaps = 12/309 (3%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
Y AHAWLLSPPCQPYTRQGLQK S DARAFSFLKILELIPHT +PPHMLFVENVVGFETS
Sbjct: 76 YAAHAWLLSPPCQPYTRQGLQKHSGDARAFSFLKILELIPHTKQPPHMLFVENVVGFETS 135
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSP 121
DT M+EILANS ++TQEFILSPLQFG+PYSRPRYFCLAKRKPL F+ + +N+QL+ S
Sbjct: 136 DTRTNMVEILANSGFVTQEFILSPLQFGIPYSRPRYFCLAKRKPLLFQHKYINHQLVWSL 195
Query: 122 SPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVD 181
PL G+D+ TV ++DQ +SWDKLL+SC+PV FLEF NS + V+ ET F+ A +
Sbjct: 196 GPLFGHDEGTVADRYDQSPESWDKLLQSCEPVVSFLEFKNSSNGVDAETDFV----AITN 251
Query: 182 DFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGS 241
D G E T E + ++D ++VP +LIERWGSAMDIVYPDS RCCCFTKSYYRYVKGTGS
Sbjct: 252 DSGDLENTGEGN-LTTMDQYIVPSNLIERWGSAMDIVYPDSNRCCCFTKSYYRYVKGTGS 310
Query: 242 LLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSI 301
LLATVQPK KGK SSL E+ LRYFTPREVANLHSFP DF FP H+SLRQR LSI
Sbjct: 311 LLATVQPKEKGKTSSLHEKGLRYFTPREVANLHSFPKDFHFPEHISLRQR-------LSI 363
Query: 302 AVVAPLLQY 310
+ V + +
Sbjct: 364 SFVGSMCMF 372
>gi|21553420|gb|AAM62513.1| DNA methyltransferase PMT1-like protein [Arabidopsis thaliana]
Length = 383
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 219/311 (70%), Positives = 240/311 (77%), Gaps = 7/311 (2%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
Y A AWLLSPPCQPYTRQGLQK S DARA SFL+ILELIPHT KPP MLFVENVVGFETS
Sbjct: 78 YNADAWLLSPPCQPYTRQGLQKHSGDARASSFLRILELIPHTTKPPQMLFVENVVGFETS 137
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSP 121
DTH +MI L DY+TQEFILSPLQFGVPYSRPRYFCLAKRKPL F+ Q NN+LL SP
Sbjct: 138 DTHMEMIGTLTKLDYVTQEFILSPLQFGVPYSRPRYFCLAKRKPLPFKSQHSNNKLLWSP 197
Query: 122 SPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVD 181
PL G DD K Q ++ DKLLE C+PVE+FLE + V+ E +
Sbjct: 198 DPLYGRDDQVEFGKC-QAEEGLDKLLEFCEPVEKFLELAA---HVDGEPSSVDDSENGSK 253
Query: 182 DFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGS 241
D E D S+ +LVP+SLIERWG+AMDIVYPDSKRCCCFTKSYYRYVKGTGS
Sbjct: 254 DCCGQEGDSVPD---SVHQYLVPVSLIERWGNAMDIVYPDSKRCCCFTKSYYRYVKGTGS 310
Query: 242 LLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSI 301
LLATVQPK KGK S LKEQ LRYFTPREVAN HSFP DF+FP H+SLRQRYA+LGNSLS+
Sbjct: 311 LLATVQPKIKGKESCLKEQRLRYFTPREVANFHSFPEDFEFPKHISLRQRYAMLGNSLSV 370
Query: 302 AVVAPLLQYLF 312
AVVAPLL+YLF
Sbjct: 371 AVVAPLLRYLF 381
>gi|449441930|ref|XP_004138735.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase-like [Cucumis
sativus]
gi|449514978|ref|XP_004164528.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase-like [Cucumis
sativus]
Length = 385
Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/314 (67%), Positives = 242/314 (77%), Gaps = 7/314 (2%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
Y AH WLLSPPCQPYTRQGLQKQS DARAFSFLKILEL+ +PP MLF+ENVVGFETS
Sbjct: 76 YQAHVWLLSPPCQPYTRQGLQKQSGDARAFSFLKILELMVEASRPPVMLFMENVVGFETS 135
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSP 121
DTH KMIEIL + + TQEFILSP+QFGVPYSRPRYFCLAKRKPL F +L NNQLL SP
Sbjct: 136 DTHTKMIEILEKTGFSTQEFILSPMQFGVPYSRPRYFCLAKRKPLFFEKELYNNQLLWSP 195
Query: 122 SPLLGND-DMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAV 180
+PLL +D ++ I H S DKLL SC+P+ RFL+ SN + + + + A
Sbjct: 196 NPLLDSDANLESIETHGSQATS-DKLLLSCEPICRFLDHSNHQELSFYDASSIQSEVALE 254
Query: 181 DDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTG 240
+ A E+ +E + +LVP SLI+RWGSAMDIVYPDS+RCCCFTKSYYRYVKGTG
Sbjct: 255 KNKDADEQVIE-----PFNQYLVPSSLIDRWGSAMDIVYPDSRRCCCFTKSYYRYVKGTG 309
Query: 241 SLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLS 300
SLLA + + GKA SLKEQ LRYFTPREVANLHSFP DFQFP H+ LRQRYALLGNSLS
Sbjct: 310 SLLAPFETEGMGKAHSLKEQKLRYFTPREVANLHSFPEDFQFPQHIGLRQRYALLGNSLS 369
Query: 301 IAVVAPLLQYLFAQ 314
IAVVAPLL+YLF +
Sbjct: 370 IAVVAPLLRYLFTE 383
>gi|357445897|ref|XP_003593226.1| tRNA (cytosine-5-)-methyltransferase [Medicago truncatula]
gi|355482274|gb|AES63477.1| tRNA (cytosine-5-)-methyltransferase [Medicago truncatula]
Length = 378
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 207/314 (65%), Positives = 242/314 (77%), Gaps = 4/314 (1%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
YGA AWLLSPPCQPYTRQGLQK + DARAFSFL+ILELIP ++PP MLFVENVVGFETS
Sbjct: 69 YGADAWLLSPPCQPYTRQGLQKDTGDARAFSFLQILELIPFLLQPPSMLFVENVVGFETS 128
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSP 121
DTHAK+IEIL ++++TQEFILSPLQFG+PYSRPRYFCLAKRKP SF LN QL++SP
Sbjct: 129 DTHAKLIEILEKTNFITQEFILSPLQFGIPYSRPRYFCLAKRKPSSFLNGCLNRQLIQSP 188
Query: 122 SPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVD 181
PL + + T + D + LL+SC P+E+FL N N E+ ++ T+ +
Sbjct: 189 RPLFEHFN-TAPKEDDLSLEDSQNLLQSCQPIEKFLVLKNPNSDTNVESA--ASTTSLSN 245
Query: 182 DFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGS 241
D T ++D + V SL+ERWGSAMD+VYPDSKRCCCFTKSYYRYVKGTGS
Sbjct: 246 DTSRTSGTDNDHEYDTLDKYYVHPSLLERWGSAMDVVYPDSKRCCCFTKSYYRYVKGTGS 305
Query: 242 LLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSI 301
LLATVQP + K +SLKEQ LRYFTPREVANLHSFP DF+FP H+SL+QRYALLGNSLSI
Sbjct: 306 LLATVQPVKRDK-TSLKEQCLRYFTPREVANLHSFPEDFEFPEHISLKQRYALLGNSLSI 364
Query: 302 AVVAPLLQYLFAQA 315
AVVA LLQYLF +A
Sbjct: 365 AVVASLLQYLFTEA 378
>gi|363814463|ref|NP_001242866.1| uncharacterized protein LOC100792567 [Glycine max]
gi|255640237|gb|ACU20409.1| unknown [Glycine max]
Length = 385
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 209/313 (66%), Positives = 241/313 (76%), Gaps = 3/313 (0%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
YGA AWLLSPPCQPYTRQGLQK + DARAFSFL+ILEL+P ++PP MLFVENVVGFETS
Sbjct: 75 YGADAWLLSPPCQPYTRQGLQKDTGDARAFSFLQILELMPFLLRPPSMLFVENVVGFETS 134
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSP 121
DT+AK+IEIL ++++TQEFIL+PLQFG+PYSRPRYFCLAKRKP SF + LN+QL++SP
Sbjct: 135 DTYAKLIEILEKTNFITQEFILTPLQFGIPYSRPRYFCLAKRKPSSFVNECLNSQLIQSP 194
Query: 122 SPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVD 181
PL + D T + D + LL+SC P+E FLE N + E+ L T + D
Sbjct: 195 PPLFEHFD-TAADEDDSSKEDRQNLLQSCQPIENFLELKNPSSDIAVESVALRTDLSN-D 252
Query: 182 DFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGS 241
+ D S+D + V SLIERWGSAMD+VYPDSKRCCCFTKSYYRYVKGTGS
Sbjct: 253 APRTLGKNNGHDEYESLDQYFVHPSLIERWGSAMDVVYPDSKRCCCFTKSYYRYVKGTGS 312
Query: 242 LLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSI 301
LLATVQP + K +SLKEQ LRYFTPREVANLHSFP F FP H+SLRQRYALLGNSLSI
Sbjct: 313 LLATVQPVKRDK-TSLKEQCLRYFTPREVANLHSFPEGFVFPEHISLRQRYALLGNSLSI 371
Query: 302 AVVAPLLQYLFAQ 314
AVVAPLLQYLF Q
Sbjct: 372 AVVAPLLQYLFTQ 384
>gi|356528743|ref|XP_003532958.1| PREDICTED: LOW QUALITY PROTEIN: tRNA
(cytosine-5-)-methyltransferase-like [Glycine max]
Length = 348
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/321 (62%), Positives = 240/321 (74%), Gaps = 12/321 (3%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
YGA AWLLSPPCQPYTRQGLQK + DARAFSFL+ILEL+P ++PP MLFVENVVGFETS
Sbjct: 31 YGADAWLLSPPCQPYTRQGLQKDTGDARAFSFLQILELMPFLLRPPSMLFVENVVGFETS 90
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSP 121
DTHAK+IEIL ++++TQEFIL+PLQFG+PYSRPRYFCLAKRKP SF + LNN L++S
Sbjct: 91 DTHAKLIEILEKTNFITQEFILTPLQFGIPYSRPRYFCLAKRKPSSFVNECLNNLLIQSS 150
Query: 122 SPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVD 181
PL G+ D TV + + LL+SC P+E+F+E N + + E+ L T + +
Sbjct: 151 PPLFGHFD-TVADDDNSSKEDRQNLLQSCQPIEKFIELKNLSNDIAVESEALRTDLS--N 207
Query: 182 DFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGS 241
D S+D + + SLI+RWGSAMD+VYPDSKRCCCFTKSYYRYVKGTGS
Sbjct: 208 DAPRTLGENNGHEYESLDQYYIHPSLIDRWGSAMDVVYPDSKRCCCFTKSYYRYVKGTGS 267
Query: 242 LLAT--------VQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYA 293
LLA VQP + K +SLKEQ LRYFTPREVANLHS P +F+FP H+SL+QRYA
Sbjct: 268 LLAKLSRXEFYLVQPVKRDK-TSLKEQCLRYFTPREVANLHSSPEEFEFPEHISLKQRYA 326
Query: 294 LLGNSLSIAVVAPLLQYLFAQ 314
LLGNSLSIAVVAPLL YLF +
Sbjct: 327 LLGNSLSIAVVAPLLLYLFTE 347
>gi|194706928|gb|ACF87548.1| unknown [Zea mays]
gi|413950581|gb|AFW83230.1| hypothetical protein ZEAMMB73_174249 [Zea mays]
gi|413950582|gb|AFW83231.1| hypothetical protein ZEAMMB73_174249 [Zea mays]
Length = 334
Score = 361 bits (927), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 188/319 (58%), Positives = 228/319 (71%), Gaps = 36/319 (11%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
Y AHAWLLSPPCQPYTRQGLQK S+DARAFSF+KIL L+ PP MLFVENVVGFE S
Sbjct: 47 YKAHAWLLSPPCQPYTRQGLQKHSADARAFSFIKILNLMQDMSYPPQMLFVENVVGFEVS 106
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSP 121
DTH +++E+L++ ++ TQEFILSPLQFGVPYSRPRYFCLAKR+P+ FR +NN+LL++P
Sbjct: 107 DTHDQLLEVLSSLNFNTQEFILSPLQFGVPYSRPRYFCLAKREPVRFRHAFVNNKLLQTP 166
Query: 122 SPLLGNDDMTVITKHDQPDDSWDKLLES-CDPVERFLEFSNSGDQVNTETGFLSTGTAAV 180
L +T+ + D ++ LE C P++ FL G
Sbjct: 167 MCL----SLTLSSTSQGSDHQTEEELEPVCKPIKDFLVKEADG----------------- 205
Query: 181 DDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTG 240
G +ETV D ++VP++LIERWG+AMDIVYP+ KRCCCFTKSYYRYVKGTG
Sbjct: 206 ---GTPDETVLQD-------YMVPVNLIERWGNAMDIVYPEFKRCCCFTKSYYRYVKGTG 255
Query: 241 SLLATVQ----PKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLG 296
SLLAT + P+ K + SSLKE LR+FTPREVAN HSFP +F FP H+SLRQ+YA+LG
Sbjct: 256 SLLATSKNLNVPEEKLQISSLKELGLRFFTPREVANFHSFPSNFCFPDHISLRQQYAMLG 315
Query: 297 NSLSIAVVAPLLQYLFAQA 315
NSLSIAVV PLL YLFA+A
Sbjct: 316 NSLSIAVVGPLLHYLFAEA 334
>gi|162461489|ref|NP_001105173.1| DNA methyl transferase4 [Zea mays]
gi|13936240|gb|AAK40306.1| DNA methyltransferase ZMET4 [Zea mays]
gi|194697288|gb|ACF82728.1| unknown [Zea mays]
gi|413950584|gb|AFW83233.1| DNA methyltransferase ZMET4 isoform 1 [Zea mays]
gi|413950585|gb|AFW83234.1| DNA methyltransferase ZMET4 isoform 2 [Zea mays]
Length = 357
Score = 360 bits (924), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 188/319 (58%), Positives = 228/319 (71%), Gaps = 36/319 (11%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
Y AHAWLLSPPCQPYTRQGLQK S+DARAFSF+KIL L+ PP MLFVENVVGFE S
Sbjct: 70 YKAHAWLLSPPCQPYTRQGLQKHSADARAFSFIKILNLMQDMSYPPQMLFVENVVGFEVS 129
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSP 121
DTH +++E+L++ ++ TQEFILSPLQFGVPYSRPRYFCLAKR+P+ FR +NN+LL++P
Sbjct: 130 DTHDQLLEVLSSLNFNTQEFILSPLQFGVPYSRPRYFCLAKREPVRFRHAFVNNKLLQTP 189
Query: 122 SPLLGNDDMTVITKHDQPDDSWDKLLES-CDPVERFLEFSNSGDQVNTETGFLSTGTAAV 180
L +T+ + D ++ LE C P++ FL
Sbjct: 190 MCL----SLTLSSTSQGSDHQTEEELEPVCKPIKDFL--------------------VKE 225
Query: 181 DDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTG 240
D G +ETV D ++VP++LIERWG+AMDIVYP+ KRCCCFTKSYYRYVKGTG
Sbjct: 226 ADGGTPDETVLQD-------YMVPVNLIERWGNAMDIVYPEFKRCCCFTKSYYRYVKGTG 278
Query: 241 SLLATVQ----PKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLG 296
SLLAT + P+ K + SSLKE LR+FTPREVAN HSFP +F FP H+SLRQ+YA+LG
Sbjct: 279 SLLATSKNLNVPEEKLQISSLKELGLRFFTPREVANFHSFPSNFCFPDHISLRQQYAMLG 338
Query: 297 NSLSIAVVAPLLQYLFAQA 315
NSLSIAVV PLL YLFA+A
Sbjct: 339 NSLSIAVVGPLLHYLFAEA 357
>gi|353259789|gb|AEQ76841.1| DNA methyltransferase [Triticum aestivum]
Length = 373
Score = 360 bits (923), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 188/323 (58%), Positives = 228/323 (70%), Gaps = 28/323 (8%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
Y AHAWLLSPPCQPYTRQGLQK+S+DARAFSF+KIL L+ + PP MLFVENVVGFE S
Sbjct: 70 YKAHAWLLSPPCQPYTRQGLQKRSADARAFSFIKILNLMQNMSFPPQMLFVENVVGFEVS 129
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSP 121
DTH +++ +L+ + TQEFILSPLQFGVPYSRPRYFCLAK++ + F +N++LLR+P
Sbjct: 130 DTHDQLLAVLSTLSFNTQEFILSPLQFGVPYSRPRYFCLAKQESMCFPNPSVNDKLLRTP 189
Query: 122 SPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVD 181
+ L N T + D + D L C+P+ FLE + GD+ +A +
Sbjct: 190 TCLTLNTTRT----QNSYDQNEDDLEVVCNPIRNFLEAQSIGDK---------ESSAIIS 236
Query: 182 DFGAAEETVEVDRCVSID----HFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVK 237
F E D C I+ + VPLSLIERWG+AMDIVYP+SKRCCCFTKSYYRYVK
Sbjct: 237 GFK------EADGCTPIETASHDYTVPLSLIERWGNAMDIVYPESKRCCCFTKSYYRYVK 290
Query: 238 GTGSLLATVQ-----PKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRY 292
GTGS+L T + PK + SSL E LR+FTPREVANLHSFP F+FP +SLRQ+Y
Sbjct: 291 GTGSVLVTSKSLKPVPKENLEMSSLSELGLRFFTPREVANLHSFPPSFRFPDQISLRQQY 350
Query: 293 ALLGNSLSIAVVAPLLQYLFAQA 315
A+LGNSLSIAVVAPLL YLFA+
Sbjct: 351 AMLGNSLSIAVVAPLLCYLFAET 373
>gi|357135492|ref|XP_003569343.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase-like isoform
2 [Brachypodium distachyon]
Length = 374
Score = 357 bits (915), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 190/320 (59%), Positives = 231/320 (72%), Gaps = 23/320 (7%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
Y AHAWLLSPPCQPYTRQGLQK S+DARAFSF+KIL L+ + PP +LFVENVVGFE S
Sbjct: 70 YKAHAWLLSPPCQPYTRQGLQKHSADARAFSFIKILNLMSNMRFPPQVLFVENVVGFEVS 129
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSP 121
DTH +++E+L+ ++ TQEFILSPLQFGVPYSRPRYFCLAK++ + F+ N +LL +P
Sbjct: 130 DTHDQLLEVLSILNFNTQEFILSPLQFGVPYSRPRYFCLAKQESMCFQNASANKKLLWTP 189
Query: 122 SPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFS--NSGDQVNTETGFLSTGTAA 179
+ L N T + D + D+L +C ++ FLE N GDQ +G +S A
Sbjct: 190 TCLKFNS-----TTQNSYDQNEDELEIACRSIKDFLETQSINIGDQ--DCSGTISAFKEA 242
Query: 180 VDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGT 239
D ETV D ++VPL+LIERWG+AMDIVYP+SKRCCCFTKSYYRYVKGT
Sbjct: 243 --DGCTPSETVSQD-------YIVPLNLIERWGNAMDIVYPESKRCCCFTKSYYRYVKGT 293
Query: 240 GSLLATVQ-----PKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYAL 294
GSLLAT + PK + SSL E LR+FTPREVANLHSFP F FP H+SLRQ+YA+
Sbjct: 294 GSLLATSKNLKPIPKENLEISSLNELRLRFFTPREVANLHSFPSSFCFPDHISLRQQYAM 353
Query: 295 LGNSLSIAVVAPLLQYLFAQ 314
LGNSLS+AVVAPLL YLF++
Sbjct: 354 LGNSLSVAVVAPLLHYLFSE 373
>gi|357135490|ref|XP_003569342.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase-like isoform
1 [Brachypodium distachyon]
Length = 359
Score = 350 bits (898), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 182/318 (57%), Positives = 224/318 (70%), Gaps = 34/318 (10%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
Y AHAWLLSPPCQPYTRQGLQK S+DARAFSF+KIL L+ + PP +LFVENVVGFE S
Sbjct: 70 YKAHAWLLSPPCQPYTRQGLQKHSADARAFSFIKILNLMSNMRFPPQVLFVENVVGFEVS 129
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSP 121
DTH +++E+L+ ++ TQEFILSPLQFGVPYSRPRYFCLAK++ + F+ N +LL +P
Sbjct: 130 DTHDQLLEVLSILNFNTQEFILSPLQFGVPYSRPRYFCLAKQESMCFQNASANKKLLWTP 189
Query: 122 SPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVD 181
+ L N T + D + D+L +C ++ FLE Q+ G + T + D
Sbjct: 190 TCLKFNS-----TTQNSYDQNEDELEIACRSIKDFLE-----TQIKEADGCTPSETVSQD 239
Query: 182 DFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGS 241
++VPL+LIERWG+AMDIVYP+SKRCCCFTKSYYRYVKGTGS
Sbjct: 240 -------------------YIVPLNLIERWGNAMDIVYPESKRCCCFTKSYYRYVKGTGS 280
Query: 242 LLATVQ-----PKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLG 296
LLAT + PK + SSL E LR+FTPREVANLHSFP F FP H+SLRQ+YA+LG
Sbjct: 281 LLATSKNLKPIPKENLEISSLNELRLRFFTPREVANLHSFPSSFCFPDHISLRQQYAMLG 340
Query: 297 NSLSIAVVAPLLQYLFAQ 314
NSLS+AVVAPLL YLF++
Sbjct: 341 NSLSVAVVAPLLHYLFSE 358
>gi|413950580|gb|AFW83229.1| hypothetical protein ZEAMMB73_174249 [Zea mays]
Length = 310
Score = 321 bits (823), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 168/295 (56%), Positives = 206/295 (69%), Gaps = 36/295 (12%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
Y AHAWLLSPPCQPYTRQGLQK S+DARAFSF+KIL L+ PP MLFVENVVGFE S
Sbjct: 47 YKAHAWLLSPPCQPYTRQGLQKHSADARAFSFIKILNLMQDMSYPPQMLFVENVVGFEVS 106
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSP 121
DTH +++E+L++ ++ TQEFILSPLQFGVPYSRPRYFCLAKR+P+ FR +NN+LL++P
Sbjct: 107 DTHDQLLEVLSSLNFNTQEFILSPLQFGVPYSRPRYFCLAKREPVRFRHAFVNNKLLQTP 166
Query: 122 SPLLGNDDMTVITKHDQPDDSWDKLLES-CDPVERFLEFSNSGDQVNTETGFLSTGTAAV 180
L +T+ + D ++ LE C P++ FL G
Sbjct: 167 MCL----SLTLSSTSQGSDHQTEEELEPVCKPIKDFLVKEADG----------------- 205
Query: 181 DDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTG 240
G +ETV D ++VP++LIERWG+AMDIVYP+ KRCCCFTKSYYRYVKGTG
Sbjct: 206 ---GTPDETVLQD-------YMVPVNLIERWGNAMDIVYPEFKRCCCFTKSYYRYVKGTG 255
Query: 241 SLLATVQ----PKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQR 291
SLLAT + P+ K + SSLKE LR+FTPREVAN HSFP +F FP H+SLRQ+
Sbjct: 256 SLLATSKNLNVPEEKLQISSLKELGLRFFTPREVANFHSFPSNFCFPDHISLRQQ 310
>gi|147856667|emb|CAN80315.1| hypothetical protein VITISV_020760 [Vitis vinifera]
Length = 1148
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 149/219 (68%), Positives = 173/219 (78%), Gaps = 3/219 (1%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
Y AHAWLLSPPCQPYTRQGLQK S DARAFSFLKILELI HT+ PP +LFVENVVGFETS
Sbjct: 927 YRAHAWLLSPPCQPYTRQGLQKHSGDARAFSFLKILELIQHTLHPPLILFVENVVGFETS 986
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSP 121
DTH KMIEIL+ + ++TQEFILSP+QFGVPYSRPRYFCLAKRKP SF QL NNQLL +P
Sbjct: 987 DTHEKMIEILSKTGFVTQEFILSPIQFGVPYSRPRYFCLAKRKPSSFENQLFNNQLLSTP 1046
Query: 122 SPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVD 181
SPL G++D ++I +HDQ + WDKLL+SC+PV RFLEF N+ + + TE+ +L T + + D
Sbjct: 1047 SPLFGHEDDSLIDEHDQSEKIWDKLLQSCEPVXRFLEFKNTINPLETESSYLETLSVSTD 1106
Query: 182 DFGAAEETVEVDR--CVSIDHFLVPLSLIERWGSAMDIV 218
G E E DR S D F VPLSLIERWGSAM I+
Sbjct: 1107 ASGELENN-ERDRSDSNSWDQFSVPLSLIERWGSAMGIL 1144
>gi|222618843|gb|EEE54975.1| hypothetical protein OsJ_02581 [Oryza sativa Japonica Group]
Length = 353
Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 169/323 (52%), Positives = 208/323 (64%), Gaps = 48/323 (14%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
Y A AWLLSPPCQPYTRQGLQK S+DARAFSF+KIL L+ + PP MLFVENVVGFE S
Sbjct: 70 YKAQAWLLSPPCQPYTRQGLQKHSADARAFSFIKILNLMKNMCFPPQMLFVENVVGFEVS 129
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSP 121
DTH ++IE+L++ ++ TQEFILSPLQFG+PYSRPRYFCLAKR+P+SF+ N++LLR+P
Sbjct: 130 DTHDQLIEVLSDLNFNTQEFILSPLQFGIPYSRPRYFCLAKREPVSFQNPSDNSKLLRTP 189
Query: 122 SPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVD 181
+ L V H++ + D+L C P+ FLE +S A D
Sbjct: 190 TFL-----TLVRAGHNRCNPDEDELELVCKPISDFLE-------------TISLNVADQD 231
Query: 182 DFGAAEETVEVDRC----VSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVK 237
G + D C + ++VPL+LIER YYRYVK
Sbjct: 232 SSGTISDINGSDGCTPSGIISQDYVVPLNLIER---------------------YYRYVK 270
Query: 238 GTGSLLATVQ-----PKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRY 292
GTGSLLAT K + SSLKE LR+FTPREVANLHSFP F FP+H+SLRQ+Y
Sbjct: 271 GTGSLLATSNNLKRISKEDLEISSLKELGLRFFTPREVANLHSFPSSFHFPNHISLRQQY 330
Query: 293 ALLGNSLSIAVVAPLLQYLFAQA 315
A+LGNSLS+AVV PLL+YLFA+
Sbjct: 331 AMLGNSLSVAVVGPLLRYLFAET 353
>gi|218188646|gb|EEC71073.1| hypothetical protein OsI_02832 [Oryza sativa Indica Group]
Length = 353
Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 171/324 (52%), Positives = 209/324 (64%), Gaps = 50/324 (15%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
Y A AWLLSPPCQPYTRQGLQK S+DARAFSF+KIL L+ + PP MLFVENVVGFE S
Sbjct: 70 YKAQAWLLSPPCQPYTRQGLQKHSADARAFSFIKILNLMKNMCFPPQMLFVENVVGFEVS 129
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSP 121
DTH ++IE+L++ ++ TQEFILSPLQFG+PYSRPRYFCLAKR+P+SF+ N++LLR+P
Sbjct: 130 DTHDQLIEVLSDLNFNTQEFILSPLQFGIPYSRPRYFCLAKREPVSFQNPSDNSKLLRTP 189
Query: 122 SPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVD 181
+ L V H++ + D+L C P+ FLE S A D
Sbjct: 190 TFL-----TLVRAGHNRCNPDEDELELVCKPISDFLETR-------------SLNVADQD 231
Query: 182 DFGAAEETVEVDRC-----VSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYV 236
G + D C +S D ++VPL+LIER YYRYV
Sbjct: 232 SSGTISDINGSDGCTPSGIISQD-YVVPLNLIER---------------------YYRYV 269
Query: 237 KGTGSLLATVQ-----PKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQR 291
KGTGSLLAT K + SSLKE LR+FTPREVANLHSFP F FP+H+SLRQ+
Sbjct: 270 KGTGSLLATSNNLKRISKEDLEISSLKELGLRFFTPREVANLHSFPSSFHFPNHISLRQQ 329
Query: 292 YALLGNSLSIAVVAPLLQYLFAQA 315
YA+LGNSLS+AVV PLL+YLFA+
Sbjct: 330 YAMLGNSLSVAVVGPLLRYLFAET 353
>gi|168036438|ref|XP_001770714.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678075|gb|EDQ64538.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 364
Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 155/319 (48%), Positives = 200/319 (62%), Gaps = 37/319 (11%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
Y A W++SPPCQPYTRQGL+K + DARAFSFL++LE++P PP+ + VENVVGFE S
Sbjct: 71 YKADTWIMSPPCQPYTRQGLRKDAGDARAFSFLQMLEMLPQMKFPPNYILVENVVGFEDS 130
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSP 121
TH +I++ + ++TQEFILSPLQ G+PYSRPRYFCLAK+KP SF NN LL
Sbjct: 131 ITHGHLIDMFEDLGFMTQEFILSPLQLGIPYSRPRYFCLAKKKPKSFVQPAYNNSLLCEL 190
Query: 122 SPLLGNDDMTVITKHDQPDDSWDKLLES---CDPVERFLEFSNSGDQVNTETGFLSTGTA 178
PL + K ++P +++ C PV F+E E S
Sbjct: 191 GPL-------PLLKMNEP------IIDPGVYCRPVSDFME----------EEPCTSDNLG 227
Query: 179 AVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKG 238
D + E+ + +P S++ERWG D+V DSKRCCCFTKSY Y KG
Sbjct: 228 KCFDMNMCADKWEL--------YKLPSSVLERWGDCFDMVTKDSKRCCCFTKSYGSYAKG 279
Query: 239 TGSLLAT---VQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALL 295
TGS+L+T + ++ + SL LRYFTPREVANLHSFP +F FP +SL+QRYALL
Sbjct: 280 TGSVLSTKKALMTQDLPEGVSLNSLGLRYFTPREVANLHSFPPEFSFPSQVSLKQRYALL 339
Query: 296 GNSLSIAVVAPLLQYLFAQ 314
GNSLS+AVV LL+YLF++
Sbjct: 340 GNSLSVAVVGVLLRYLFSE 358
>gi|302782830|ref|XP_002973188.1| hypothetical protein SELMODRAFT_98974 [Selaginella moellendorffii]
gi|300158941|gb|EFJ25562.1| hypothetical protein SELMODRAFT_98974 [Selaginella moellendorffii]
Length = 334
Score = 284 bits (727), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 156/317 (49%), Positives = 187/317 (58%), Gaps = 55/317 (17%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
Y A AWLLSPPCQPYTRQGLQK S+DARA SFLK+L+ I PP +F+ENVVGFETS
Sbjct: 67 YEADAWLLSPPCQPYTRQGLQKDSADARASSFLKLLDTISSLSIPPTHVFIENVVGFETS 126
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSP 121
T +++I++L ++ + QE I++PLQFG+PYSRPRYFCLAKR+P F LN QL+ P
Sbjct: 127 HTRSQLIKVLEDTGFRIQECIINPLQFGIPYSRPRYFCLAKREPFQFSRSDLNGQLVSCP 186
Query: 122 SPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVD 181
N D V TK V +LE N+ D
Sbjct: 187 FDFSTNRDFHVETK----------------TVGEYLE--NASD----------------- 211
Query: 182 DFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGS 241
+ ++VP + I RWG A DIV PDS RCCCFTKSY RY KGTGS
Sbjct: 212 ---------------CTEDYMVPSTTIARWGEAYDIVTPDSGRCCCFTKSYARYAKGTGS 256
Query: 242 LLAT-----VQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLG 296
+L T P + L+ LRYFTPREVAN HSFP F FP HLS++QRYALLG
Sbjct: 257 ILVTNPSFYKDPAELSDLTWLQSAGLRYFTPREVANFHSFPKGFDFPDHLSIKQRYALLG 316
Query: 297 NSLSIAVVAPLLQYLFA 313
NSL+I VV LL YLF+
Sbjct: 317 NSLNIKVVGYLLNYLFS 333
>gi|302789792|ref|XP_002976664.1| hypothetical protein SELMODRAFT_105635 [Selaginella moellendorffii]
gi|300155702|gb|EFJ22333.1| hypothetical protein SELMODRAFT_105635 [Selaginella moellendorffii]
Length = 334
Score = 283 bits (724), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 155/313 (49%), Positives = 187/313 (59%), Gaps = 51/313 (16%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
Y A AWLLSPPCQPYTRQGLQK S+DARA SFLK+L+ I PP +F+ENVVGFETS
Sbjct: 71 YEADAWLLSPPCQPYTRQGLQKDSADARASSFLKLLDTISSLSIPPAHVFIENVVGFETS 130
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSP 121
T +++I++L ++ + QE I++PLQFG+PYSRPRYFCLAKR+P F LN QL+ P
Sbjct: 131 HTRSQLIKVLEDTGFRIQECIINPLQFGIPYSRPRYFCLAKREPFQFSRSDLNGQLVSCP 190
Query: 122 SPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVD 181
N D V TK V +LE N D
Sbjct: 191 FDFSTNRDFHVETK----------------TVGEYLE--NPSD----------------- 215
Query: 182 DFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGS 241
++ ++VP + I RWG A DIV PDS RCCCFTKSY RY KGTGS
Sbjct: 216 ---------------CMEDYMVPSTTIARWGEAYDIVTPDSGRCCCFTKSYARYAKGTGS 260
Query: 242 LLA-TVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLS 300
+L + P + L+ LRYFTPREVAN HSFP F FP HLS++QRYALLGNSL+
Sbjct: 261 ILYFSKDPAELSDLAWLQSAGLRYFTPREVANFHSFPKGFDFPDHLSIKQRYALLGNSLN 320
Query: 301 IAVVAPLLQYLFA 313
I VV LL YLF+
Sbjct: 321 IKVVGYLLNYLFS 333
>gi|294463393|gb|ADE77228.1| unknown [Picea sitchensis]
Length = 380
Score = 246 bits (628), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 145/298 (48%), Positives = 181/298 (60%), Gaps = 54/298 (18%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
+ A+AWLLSPPCQPYTRQGLQK + DARA+SF+KILELIP T+ PP MLFVENVVGFE+S
Sbjct: 75 FRANAWLLSPPCQPYTRQGLQKDAEDARAYSFMKILELIPLTLFPPTMLFVENVVGFESS 134
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSP 121
TH +M+E+L ++TQEFILSPLQF VPYSRPRYFCLAK+ L F N +L+
Sbjct: 135 ITHKRMMEVLEKIGFITQEFILSPLQFYVPYSRPRYFCLAKKAALPFPRPEFNGKLVTHI 194
Query: 122 SPLLG--NDDMTVITKHDQPDDSWDKLLE---SCDPVERFLE------------------ 158
PL+ +D++ +T Q ++ + L+ SC P++ FL+
Sbjct: 195 GPLISGEDDNLLNVTFECQMENVNEVELDTNSSCRPIKDFLQADILRSDRFGCTEMNSST 254
Query: 159 -----FSNSGDQVNTETGFLSTGTAAVD---------DF-GAAE-ETVEV---------- 192
+N + +E G +D DF G A+ + VEV
Sbjct: 255 TSHEILANKEARDESEDHHAKRGCCRIDGKEVLVCSRDFAGQADCDNVEVITENRSNIPF 314
Query: 193 ---DRCVS--IDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLAT 245
DRC + + F VP SLIERWG AMDIV+PDSKRCCCFTKSY RYVKGTGSLLAT
Sbjct: 315 ESKDRCRNSEWEQFRVPASLIERWGDAMDIVFPDSKRCCCFTKSYGRYVKGTGSLLAT 372
>gi|384251331|gb|EIE24809.1| S-adenosyl-L-methionine-dependent methyltransferase [Coccomyxa
subellipsoidea C-169]
Length = 414
Score = 238 bits (606), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 145/359 (40%), Positives = 192/359 (53%), Gaps = 63/359 (17%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
+ A WL++PPCQP+TR+GLQ+ +D R+ SFLK++ ++P PP + VENVVGFE S
Sbjct: 70 FNAQLWLMAPPCQPFTRRGLQQDVADPRSASFLKLISILPSLRHPPQYVIVENVVGFEAS 129
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK----------------- 104
++ L+ + QEF+LSPLQ G+PYSRPRY+ LA+++
Sbjct: 130 SMRKQLAAGLSAAGLDMQEFLLSPLQLGIPYSRPRYYALARQRTPSGACPFPTAPLPDAQ 189
Query: 105 -------------------PLSFRCQ-LLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWD 144
P S C NN + LG D +T +S
Sbjct: 190 PFCCPANSLLPHASKSVPPPASAECSSTQNNGNCSAGESSLGGD----LTPQSATQNSRA 245
Query: 145 KLLESCDPVERFL-EFSNSGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSI----- 198
++ ++ P+ FL E + D N+ L G+ A D A E+ E D VS
Sbjct: 246 EVSKALLPIAAFLVERPSPVDGANS----LQAGSNASDAGDGALES-EADGPVSNAATEE 300
Query: 199 -----DHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQPKNKGK 253
D F VP ++IE+WG +DIV P S+RC CFTK+Y RY KG+GS LAT
Sbjct: 301 SEAPEDFFWVPDNVIEQWGEVLDIVVPSSQRCNCFTKTYTRYTKGSGSQLATR------S 354
Query: 254 ASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 312
L+ LRYFTPRE+ANLHSFP F FP H++LRQRYALLGNSLS VVA LL+YL
Sbjct: 355 LDLLRAMRLRYFTPREIANLHSFPAGFSFPAHVTLRQRYALLGNSLSALVVADLLRYLL 413
>gi|388521015|gb|AFK48569.1| unknown [Lotus japonicus]
Length = 230
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 102/156 (65%), Positives = 123/156 (78%), Gaps = 1/156 (0%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
YG AWLLSPPCQPYTRQGLQK + DARAFSFL+ILEL+P +PP MLFVENVVGFETS
Sbjct: 68 YGTDAWLLSPPCQPYTRQGLQKDTGDARAFSFLQILELMPSLSRPPSMLFVENVVGFETS 127
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSP 121
DTHAK+IEIL ++++TQEFILSPLQFG+PYSRPRYFCLAKRKP SF +L N+QL++SP
Sbjct: 128 DTHAKLIEILEKTNFVTQEFILSPLQFGIPYSRPRYFCLAKRKPSSFVNELFNSQLIQSP 187
Query: 122 SPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFL 157
PL + T++ + + KLL+SC + FL
Sbjct: 188 RPLFEHFG-TLVNEDSSLQEDRHKLLQSCQLLRNFL 222
>gi|303285424|ref|XP_003062002.1| DNA methyltransferase [Micromonas pusilla CCMP1545]
gi|226456413|gb|EEH53714.1| DNA methyltransferase [Micromonas pusilla CCMP1545]
Length = 338
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 125/325 (38%), Positives = 165/325 (50%), Gaps = 80/325 (24%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
+ A WLLSPPCQP+TRQG ++ D RA SFL++L+++P P L VENVVGFE S
Sbjct: 77 HAASLWLLSPPCQPFTRQGAKRDVDDGRAESFLRLLDVVPTLANAPSHLLVENVVGFERS 136
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSP 121
+T ++ L Y T+E +LSP QFGVPYSRPRYFCLAKR
Sbjct: 137 ETRDALLATLRAMGYTTRERMLSPRQFGVPYSRPRYFCLAKR------------------ 178
Query: 122 SPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVD 181
+PL DD+ +H D+ D+
Sbjct: 179 APLRWVDDVFSGIEHGDDDEGADE------------------------------------ 202
Query: 182 DFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGS 241
GA T VP + + + ++ D+V D ++C CFTKSY +YVKGTGS
Sbjct: 203 --GADVWTTHA----------VPRADVVKALASADVVTRDDRKCNCFTKSYGKYVKGTGS 250
Query: 242 LLATVQPKN--------KGKASSLKEQ------HLRYFTPREVANLHSFPGDFQFPHHLS 287
++ V+ G+ + + LRYFT REVAN+HSFP +F FP H++
Sbjct: 251 FISDVRVVKGEWDGRIRNGQGADVSADDGGGSVRLRYFTEREVANVHSFPPEFTFPSHVT 310
Query: 288 LRQRYALLGNSLSIAVVAPLLQYLF 312
QRYALLGNSLS+A VAPL+ YL
Sbjct: 311 RAQRYALLGNSLSVACVAPLIDYLL 335
>gi|308805380|ref|XP_003080002.1| putative DNA methyltransferase (ISS) [Ostreococcus tauri]
gi|116058461|emb|CAL53650.1| putative DNA methyltransferase (ISS) [Ostreococcus tauri]
Length = 394
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 131/316 (41%), Positives = 169/316 (53%), Gaps = 46/316 (14%)
Query: 3 GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPH--TVKPPHMLFVENVVGFET 60
GA AWL+SPPCQP+TRQG + D RA SF +++E K P +FVENVVGFET
Sbjct: 83 GAEAWLMSPPCQPFTRQGKRLDVEDGRADSFARLVEETTKLSVEKRPRYVFVENVVGFET 142
Query: 61 SDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRS 120
S +IE L ++ QEFIL+P FGVPYSRPRYF L R +FR + N + R+
Sbjct: 143 SKMRELLIEKLREMEFHVQEFILTPTMFGVPYSRPRYF-LCARTTHAFRDAVDN--IRRA 199
Query: 121 PSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAV 180
P P + I K+D+ D+ + P+ RFL+ NS + E
Sbjct: 200 PPPCELSHKRHWIPKYDETMDADVDVA----PLSRFLDSENS--DIWRENALRQ------ 247
Query: 181 DDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTG 240
DD I+R +DIV C CFTKSY++YVKGTG
Sbjct: 248 DD-------------------------IDRAKGCIDIVSSSDTTCNCFTKSYFKYVKGTG 282
Query: 241 SLLATV---QPKNKGKASSLKEQ-HLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLG 296
S++A + G+ ++ LRYFT EV LHS P DF++P LS RQRY LLG
Sbjct: 283 SVVANRLVDKSTWDGRTGEGEDDVRLRYFTVDEVMRLHSIPSDFEWPEELSKRQRYTLLG 342
Query: 297 NSLSIAVVAPLLQYLF 312
NS+S+A VAPLL+YLF
Sbjct: 343 NSMSVACVAPLLEYLF 358
>gi|145348185|ref|XP_001418536.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578765|gb|ABO96829.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 371
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 128/319 (40%), Positives = 168/319 (52%), Gaps = 50/319 (15%)
Query: 4 AHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKIL-ELIPHTVKP-PHMLFVENVVGFETS 61
A AW +SPPCQP+TR GL+ D RA SF++++ E++ P +FVENVVGFETS
Sbjct: 95 AEAWAMSPPCQPFTRAGLKLDVDDGRAESFMRLVDEMVKMDASARPKYVFVENVVGFETS 154
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSP 121
+ + L+ S + QEFIL+P FGVPYSRPRYF LA R +F + +++ RSP
Sbjct: 155 RMRDALRDALSASAFHAQEFILTPTMFGVPYSRPRYFMLA-RSTRAFEDGV--DEIRRSP 211
Query: 122 SPLLGNDDMTVITKHDQPD-DSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAV 180
P + I PD D P+ RFL+ A
Sbjct: 212 PPSKLSHRREWI-----PDFDDVRDADVVVAPLSRFLD-------------------RAT 247
Query: 181 DDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTG 240
DD A + D ++R ++DIV + C CFTKSYY+YVKGTG
Sbjct: 248 DDIWRANAVKQDD--------------VDRAKGSIDIVTAEDTTCNCFTKSYYKYVKGTG 293
Query: 241 SLLATVQPKNKGK-----ASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALL 295
S++A Q +K + LRYFT EVA LHS P DF +P +L+ RQ+Y LL
Sbjct: 294 SVVAN-QSVDKATWDGRMGDGASDVRLRYFTVDEVARLHSLPNDFAWPSNLTTRQKYTLL 352
Query: 296 GNSLSIAVVAPLLQYLFAQ 314
GNS+S+A VAPLL YLFA
Sbjct: 353 GNSMSVACVAPLLDYLFAD 371
>gi|255081819|ref|XP_002508128.1| DNA methyltransferase [Micromonas sp. RCC299]
gi|226523404|gb|ACO69386.1| DNA methyltransferase [Micromonas sp. RCC299]
Length = 404
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 124/324 (38%), Positives = 166/324 (51%), Gaps = 52/324 (16%)
Query: 4 AHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKIL-ELIPHTVKPPHMLFVENVVGFETSD 62
A WLLSPPCQP+TRQG +K D R+ SFL++L +++P PP + VENVVGFETSD
Sbjct: 96 AGLWLLSPPCQPFTRQGHRKDKDDGRSQSFLRLLRDVVPQLRSPPTHVLVENVVGFETSD 155
Query: 63 THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPS 122
T A I + Y T+EF+L+P FGVPYSRPRYF LAK +R + PS
Sbjct: 156 TRADAIAVFRRLGYDTREFMLTPRMFGVPYSRPRYFLLAKN---GYRA---GRRASYQPS 209
Query: 123 PLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDD 182
P + G +V L+ T +
Sbjct: 210 -------------------------SRATPRRSLTRGTGLGGEVGATVRRLNR-TPPITP 243
Query: 183 FGAA---EETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGT 239
+G+ E + +V R ++ V + L A+D+V S +C CFTKSY +YVKGT
Sbjct: 244 YGSRDVNEGSADVFREYAVAERDVKIGL-----GAVDVVCRTSYKCNCFTKSYGKYVKGT 298
Query: 240 GSLL-----------ATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSL 288
GS++ TV + + LRYFT E+A +HSFP DF FP ++
Sbjct: 299 GSMVTDKLVDKDSWDGTVASGGAHEGAEGGGVRLRYFTEGEIARMHSFPSDFSFPAGVTR 358
Query: 289 RQRYALLGNSLSIAVVAPLLQYLF 312
+QRYALLGNSLS+A VAPL+ +L
Sbjct: 359 QQRYALLGNSLSVACVAPLIDHLL 382
>gi|390357256|ref|XP_001200726.2| PREDICTED: tRNA (cytosine-5-)-methyltransferase-like
[Strongylocentrotus purpuratus]
Length = 404
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/363 (32%), Positives = 193/363 (53%), Gaps = 54/363 (14%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
+ A +++SPPCQP+TR GL+ +DAR +F I+ + K P L VENV GF+TS
Sbjct: 45 FDADMFVMSPPCQPFTRVGLKGDKNDARTNAFFNIMRNLAEMAKKPTYLLVENVKGFDTS 104
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR----CQLLNNQL 117
+T ++E L +Y+ QEF+LSP+ G+P R RYF LAK++PL F+ QL+ +
Sbjct: 105 ETRNFLVETLQKCNYVFQEFLLSPMNIGIPNQRVRYFMLAKQRPLQFKEEHGTQLVQH-- 162
Query: 118 LRSPSPLLGND---------DMTVITKHDQPD----DSWDKLLESCDPV----ERFLEFS 160
R PL+ N+ D ++++ +Q + +S ++ + + E+ +E
Sbjct: 163 -RVNMPLMPNEIKETSRLVCDNSMVSSQEQTNMELTESRERTGQDESSMVSLNEQSIERK 221
Query: 161 NSGDQVNTETGFLSTGTAAVDDFGAA-----EETVEVD--RCV-----------SIDHFL 202
+N + + + + +D ++ +ET E D R + S+ +L
Sbjct: 222 TDEQHLNEKERTDNVKSGSCEDMVSSSEQNEQETGEDDERRKIGDYLQADLSEESMAEYL 281
Query: 203 VPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLAT------------VQPKN 250
+P ++ ++ + MDIV + + CFTK+Y YV+GTGS+L T +
Sbjct: 282 IPDRILLKYVNVMDIVTVEDTKTRCFTKAYAYYVEGTGSVLRTDLSADMSSAFSSGSCSD 341
Query: 251 KGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQY 310
+ LK LRYF+PREVANLH FP DF FP + +Q+Y LLGNSL++ ++A L+ Y
Sbjct: 342 DERLERLKALRLRYFSPREVANLHHFPQDFGFPECSTKKQKYRLLGNSLNVTLLAQLISY 401
Query: 311 LFA 313
+ A
Sbjct: 402 MVA 404
>gi|384497196|gb|EIE87687.1| hypothetical protein RO3G_12398 [Rhizopus delemar RA 99-880]
Length = 285
Score = 190 bits (483), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 114/322 (35%), Positives = 166/322 (51%), Gaps = 57/322 (17%)
Query: 9 LSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMI 68
+SPPCQPYTR GLQ+ S DARA SFL +L+++ P L VENV GFE SD+ ++
Sbjct: 1 MSPPCQPYTRLGLQQGSEDARAKSFLHLLKVLKEMKNKPKYLLVENVKGFEESDSREMLV 60
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGND 128
+L S+Y QEF+L+PLQ G+P SR RY+ LAK KP F + NN + P ++
Sbjct: 61 NVLQESNYSFQEFLLTPLQLGIPNSRMRYYLLAKLKPSEFAVPVTNNIIKYIPL----SE 116
Query: 129 DMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAEE 188
M+ ++ ++ D+ +P+ +LE + +D+
Sbjct: 117 KMSEAFIDNRGEEQVDE--NVVEPISNYLE-------------------SDIDE------ 149
Query: 189 TVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLL----- 243
D +L+ + + DIV S+R CCFTK YY Y +GTGS+L
Sbjct: 150 ----------DSYLLTDKTLVKNVQVFDIVKKSSRRSCCFTKGYYHYAQGTGSILQMNEE 199
Query: 244 ----ATVQPKNKGKASSLKEQ-------HLRYFTPREVANLHSFPGDFQFPHHLSLRQRY 292
+Q K K ++Q LRYFTPREV+NL FP F FP S++Q+Y
Sbjct: 200 LDTATVIQEAEKYKGVDEEKQLQLLRSLKLRYFTPREVSNLMGFPQHFSFPETSSVKQKY 259
Query: 293 ALLGNSLSIAVVAPLLQYLFAQ 314
LGNS+++ +V+ L+ YL +
Sbjct: 260 RTLGNSINVKLVSQLMCYLLKE 281
>gi|432964261|ref|XP_004086901.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase-like [Oryzias
latipes]
Length = 410
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 117/320 (36%), Positives = 163/320 (50%), Gaps = 25/320 (7%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
++SPPCQP+TR GLQ SD R SFL IL L+P +PP + +ENV GFETS ++
Sbjct: 74 MMSPPCQPFTRIGLQGDVSDPRTKSFLHILHLLPRLHRPPRFILLENVKGFETSAARDRL 133
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGN 127
I L Y+ QE + SP G+P SR RYF +A+R + + P
Sbjct: 134 INTLTECGYVFQEIMASPTSVGIPNSRLRYFLIARRSAENMNIHTGSKVWDVCAQP--AE 191
Query: 128 DDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVD-DFGAA 186
DD+ +++K P E ++ TE T + D
Sbjct: 192 DDLALVSK---------AACSGTTPPEEKASHGLVLYKLETEMQLQRKTTQNSNPDVKQI 242
Query: 187 EETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLL--- 243
++ +E V+++ +L+P + R+ +DIV P S+R CFTK Y RYV+GTGS+L
Sbjct: 243 QDFLEAGSQVNVEEYLLPPKTLLRYSLLLDIVQPTSRRSVCFTKGYGRYVEGTGSVLQGC 302
Query: 244 --ATVQP--------KNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYA 293
VQ + + L LRYFTPREVANL FP F FP H+S QRY
Sbjct: 303 MDTEVQSVFTDLELLSEEDRLQRLMSLRLRYFTPREVANLMCFPPCFSFPEHISTIQRYR 362
Query: 294 LLGNSLSIAVVAPLLQYLFA 313
+LGNSL++ +VA L+Q LF+
Sbjct: 363 VLGNSLNVLLVAKLVQLLFS 382
>gi|242058009|ref|XP_002458150.1| hypothetical protein SORBIDRAFT_03g027700 [Sorghum bicolor]
gi|241930125|gb|EES03270.1| hypothetical protein SORBIDRAFT_03g027700 [Sorghum bicolor]
Length = 233
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/157 (60%), Positives = 117/157 (74%), Gaps = 7/157 (4%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
Y AHAWLLSPPCQPYTRQGLQK S+DARAFSF+KIL L+ PP MLFVENVVGFE S
Sbjct: 70 YKAHAWLLSPPCQPYTRQGLQKHSADARAFSFIKILNLMQDMSYPPQMLFVENVVGFEVS 129
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSP 121
DTH +++E+L++ ++ TQEFILSPLQFGVPYSRPRYFCLAKR+P+ FR +NN+LL++P
Sbjct: 130 DTHDQLLEVLSSLNFNTQEFILSPLQFGVPYSRPRYFCLAKREPMRFRNASVNNKLLQTP 189
Query: 122 SPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLE 158
L MT+ + D ++ LE PV +E
Sbjct: 190 MCL----SMTLNSTSQGSDHQTEEELE---PVLNLIE 219
>gi|260796005|ref|XP_002592995.1| hypothetical protein BRAFLDRAFT_275730 [Branchiostoma floridae]
gi|229278219|gb|EEN49006.1| hypothetical protein BRAFLDRAFT_275730 [Branchiostoma floridae]
Length = 386
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 121/329 (36%), Positives = 178/329 (54%), Gaps = 38/329 (11%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
+ A +++SPPCQP+TR GL+ ++D R SFL IL+++ +PP+ + +ENV GFETS
Sbjct: 75 WNADVFMMSPPCQPFTRVGLKGDTADPRTKSFLYILDILRRMAEPPNHILLENVKGFETS 134
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSP 121
+T ++ L Y QEF+LSP QFG+P SR RYF LAKRKPL+F + + P
Sbjct: 135 ETRGNLVTTLDECGYCYQEFLLSPNQFGIPNSRLRYFLLAKRKPLTFVFEHQTEIMKEMP 194
Query: 122 -SPLLG----NDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTG 176
+ L+G N D + +Q S +K C P F D + +T
Sbjct: 195 VNSLIGQAPANQDASSSEVPNQ-STSQNKQEIPC-PYSIF-------DPEDRDTTNCREI 245
Query: 177 TAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYV 236
+ ++ EE + L+ L++R+ +DIV P S+R CCFTK+Y YV
Sbjct: 246 SEFLEPHSKEEE----------ESLLLQDKLLDRYWKVLDIVTPSSRRSCCFTKAYGHYV 295
Query: 237 KGTGSLL-----------ATVQPKNKGKASSLKEQH---LRYFTPREVANLHSFPGDFQF 282
+GTGS+L T K++ ++ L H +R+F+PREVA+LH P +F F
Sbjct: 296 EGTGSVLFSQTDIDAKDIFTKVSKSEDQSERLDLLHQLKMRFFSPREVASLHCLPPEFTF 355
Query: 283 PHHLSLRQRYALLGNSLSIAVVAPLLQYL 311
P + +QRY +LGNSL+ VVA L + L
Sbjct: 356 PQATTTKQRYRVLGNSLNAHVVAELFKLL 384
>gi|242253856|ref|NP_001156357.1| tRNA (cytosine-5-)-methyltransferase [Sus scrofa]
gi|226222432|gb|ACO38647.1| DNA methyltransferase 2 [Sus scrofa]
Length = 408
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 124/335 (37%), Positives = 177/335 (52%), Gaps = 46/335 (13%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
L+SPPCQP+TR GLQ +D R SFL IL+++P K P + +ENV GFE S T +
Sbjct: 74 LMSPPCQPFTRIGLQGDVTDPRTNSFLYILDILPRLQKLPKYILLENVKGFEVSSTRDLL 133
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGN 127
I+ + N + QEF+LSP G+P SR RYF +AK + F Q L+ P
Sbjct: 134 IQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPFPFQAPGQVLMEFPQ----- 188
Query: 128 DDMTVITKHDQPD--DSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDF-- 183
+ ++H Q D+ K+ E +ER + +S E TA D
Sbjct: 189 ----MESEHPQKHAIDAQSKIEEK--KIERNICLDSSAQCSGKEAILFKLETAGEIDRKH 242
Query: 184 ------------GAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKS 231
G E+ ++++ +FL P SL+ R+ +DIV P S+R CFTK
Sbjct: 243 QQDSDLSVQMLKGFLEDDIDMN-----SYFLPPKSLL-RYALLLDIVKPTSRRSMCFTKG 296
Query: 232 YYRYVKGTGSLLAT---VQPKN----------KGKASSLKEQHLRYFTPREVANLHSFPG 278
Y RY++GTGS+L T VQ +N + K L LR+FTP+E+ANL FP
Sbjct: 297 YGRYIEGTGSVLQTSEDVQIENIYKSLTSLSPEEKIMKLLMLKLRFFTPKEIANLLGFPP 356
Query: 279 DFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFA 313
+F FP ++++QRY LLGNSL++ VVA L++ L+A
Sbjct: 357 EFGFPEKITVKQRYRLLGNSLNVHVVAKLIKILYA 391
>gi|338721479|ref|XP_001916681.2| PREDICTED: LOW QUALITY PROTEIN: tRNA
(cytosine(38)-C(5))-methyltransferase-like [Equus
caballus]
Length = 392
Score = 186 bits (473), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 127/328 (38%), Positives = 182/328 (55%), Gaps = 34/328 (10%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
L+SPPCQP+TR GLQ +D R SFL IL ++P K P + +ENV GFE S T +
Sbjct: 75 LMSPPCQPFTRIGLQGDVTDPRTNSFLYILNILPRLQKLPKYILLENVKGFEVSSTRDLL 134
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRCQ---LLNNQLLRSPS 122
I+ + N + QEF+LSP G+P SR RYF +AK +PL F+ L+ + S
Sbjct: 135 IQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPGQVLMEFPKIESEH 194
Query: 123 PLLGNDDMT--VITKHDQPD---DSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGT 177
P D + K +P+ DS D +LE P+ LE + D+ + + LS
Sbjct: 195 PEKHAIDAENQIEGKKIEPNIWSDSSDHVLEK-QPILFKLETAEEIDRKHQQDSDLS--V 251
Query: 178 AAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVK 237
+ DF E+ V+V++ +FL P SL+ R+ +DIV P +R CFTK Y Y++
Sbjct: 252 QMLKDF--LEDNVDVNQ-----YFLPPKSLL-RYALLLDIVKPTCRRSMCFTKGYGSYIE 303
Query: 238 GTGSLLATVQPKN----KGKASSLKEQH---------LRYFTPREVANLHSFPGDFQFPH 284
GTGS+L T + ++L ++ LRYFTPRE+ANL FP DF FP
Sbjct: 304 GTGSVLQTAEDVQIEYIYNSLTNLSQEEKLTKLLMLKLRYFTPREIANLLGFPPDFGFPE 363
Query: 285 HLSLRQRYALLGNSLSIAVVAPLLQYLF 312
++++QRY LLGNSL++ VVA L++ L+
Sbjct: 364 KITVKQRYRLLGNSLNVHVVAKLIKILY 391
>gi|410211590|gb|JAA03014.1| tRNA aspartic acid methyltransferase 1 [Pan troglodytes]
gi|410259146|gb|JAA17539.1| tRNA aspartic acid methyltransferase 1 [Pan troglodytes]
Length = 391
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 121/327 (37%), Positives = 182/327 (55%), Gaps = 32/327 (9%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
L+SPPCQP+TR G Q +D+R SFL IL+++P K P + +ENV GFE S T +
Sbjct: 74 LMSPPCQPFTRIGRQGDMTDSRTNSFLYILDILPRLQKLPKYILLENVKGFEVSSTRDLL 133
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRC---QLLNNQLLRS-- 120
I+ + N + QEF+LSP G+P SR RYF +AK +PL F+ L+ + S
Sbjct: 134 IQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPGQVLMEFPKIESVH 193
Query: 121 PSPLLGNDDMTVITKHDQPDDSWDKLLESC--DPVERFLEFSNSGDQVNTETGFLSTGTA 178
P + + + K+ +P+ S+D ++ D + LE + + N E LS
Sbjct: 194 PQKYAMDVENKIQEKNVEPNISFDGSIQCSGKDAILFKLETAEEIHRKNQEDSDLS--VK 251
Query: 179 AVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKG 238
+ DF ++ ++ +L+P + R+ +DIV P +R CFTK Y Y++G
Sbjct: 252 MLKDF--------LEDDTDVNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSYIEG 303
Query: 239 TGSLLAT---VQPKNKGKA---SSLKEQ-------HLRYFTPREVANLHSFPGDFQFPHH 285
TGS+L T VQ +N K+ S +EQ LRYFTP+E+ANL FP +F FP
Sbjct: 304 TGSVLQTAEDVQVENIYKSLTNLSQEEQITKLLILKLRYFTPKEIANLLGFPPEFGFPEK 363
Query: 286 LSLRQRYALLGNSLSIAVVAPLLQYLF 312
++++QRY LLGNSL++ VVA L++ L+
Sbjct: 364 ITVKQRYRLLGNSLNVHVVAKLIKILY 390
>gi|73948982|ref|XP_848593.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase isoform 2
[Canis lupus familiaris]
Length = 391
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 126/333 (37%), Positives = 177/333 (53%), Gaps = 38/333 (11%)
Query: 5 HAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTH 64
+ L+SPPCQP+TR GLQ +D R S L IL ++P K P + +ENV GFE S T
Sbjct: 71 NMILMSPPCQPFTRIGLQGDVTDPRTNSLLYILNILPRLQKLPKYVLLENVKGFEVSSTR 130
Query: 65 AKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRCQLLNNQLLRSPS 122
+I+ L N + QEF+LSP FG+P SR RYF +AK +PL F Q L+ P
Sbjct: 131 DLLIQTLENCGFQYQEFLLSPTSFGIPNSRLRYFLIAKLQSEPLPF--QAPGQVLMEFPK 188
Query: 123 PLLGNDDMTVI-------TKHDQPDDSWDKLLESCDPVERF---LEFSNSGDQVNTETGF 172
N + I K +P+ +DK C E LE D+ + +
Sbjct: 189 TESENPEKNTIDAENKIERKKIEPNICFDK-GRQCSGKETILFKLETIQELDRKHHQDND 247
Query: 173 LSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSY 232
LS + DF E+ V++++ +FL P SL+ R+ +DIV P +R CFTK Y
Sbjct: 248 LS--VQMLKDF--LEDDVDMNQ-----YFLPPKSLL-RYALLLDIVKPTCRRSTCFTKGY 297
Query: 233 YRYVKGTGSLLATVQP-------------KNKGKASSLKEQHLRYFTPREVANLHSFPGD 279
YV+GTGS+L T + + K + L LRYFTP+E+ANL FP +
Sbjct: 298 GSYVEGTGSVLQTTEDVQIEDIYKSLTNLSQEEKITKLLMLKLRYFTPKEIANLLGFPSE 357
Query: 280 FQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 312
F FP ++++QRY LLGNSL++ VVA L++ L+
Sbjct: 358 FGFPEKITVKQRYRLLGNSLNVHVVAKLIKILY 390
>gi|2895945|gb|AAC39764.1| putative DNA cytosine methyltransferase DNMT2 [Homo sapiens]
Length = 391
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 121/327 (37%), Positives = 182/327 (55%), Gaps = 32/327 (9%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
L+SPPCQP+TR G Q +D+R SFL IL+++P K P + +ENV GFE S T +
Sbjct: 74 LMSPPCQPFTRIGRQGDMTDSRTNSFLHILDILPRLQKLPKYILLENVKGFEVSSTRDLL 133
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRC---QLLNNQLLRS-- 120
I+ + N + QEFILSP G+P SR RYF +AK +PL F+ L+ + S
Sbjct: 134 IQTIENCGFQYQEFILSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPGQVLMEFPKIESVH 193
Query: 121 PSPLLGNDDMTVITKHDQPDDSWDKLLESC--DPVERFLEFSNSGDQVNTETGFLSTGTA 178
P + + + K+ +P+ S+D ++ D + LE + + N + LS
Sbjct: 194 PQKYAMDVENKIQEKNVEPNISFDGSIQCSGKDAILFKLETAEEIHRKNQQDSDLS--VK 251
Query: 179 AVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKG 238
+ DF ++ ++ +L+P + R+ +DIV P +R CFTK Y Y++G
Sbjct: 252 MLKDF--------LEDDTDVNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSYIEG 303
Query: 239 TGSLLAT---VQPKNKGKA---SSLKEQ-------HLRYFTPREVANLHSFPGDFQFPHH 285
TGS+L T VQ +N K+ S +EQ LRYFTP+E+ANL FP +F FP
Sbjct: 304 TGSVLQTAEDVQVENIYKSLTNLSQEEQITKLLILKLRYFTPKEIANLLGFPPEFGFPEK 363
Query: 286 LSLRQRYALLGNSLSIAVVAPLLQYLF 312
++++QRY LLGNSL++ VVA L++ L+
Sbjct: 364 ITVKQRYRLLGNSLNVHVVAKLIKILY 390
>gi|440909178|gb|ELR59115.1| tRNA (cytosine-5-)-methyltransferase [Bos grunniens mutus]
Length = 391
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 124/340 (36%), Positives = 175/340 (51%), Gaps = 54/340 (15%)
Query: 5 HAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTH 64
+ L+SPPCQP+TR GLQ +D R SFL IL+++P K P + +ENV GFE S T
Sbjct: 71 NMILMSPPCQPFTRIGLQGDVTDPRTNSFLYILDILPRLQKLPKYILLENVKGFEMSSTR 130
Query: 65 AKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPL 124
+I+ + N + QEF+LSP G+P SR RYF +AK +P F Q L+ P
Sbjct: 131 DLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQPEPFPFQAPGQVLMEFPK-- 188
Query: 125 LGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFG 184
T+ + P E+ E +G ++ ++ +G A+
Sbjct: 189 ---------TESEHPPKYAIN-------AEKKTEEKKTGPKICFDSSTQCSGKEAI--LF 230
Query: 185 AAEETVEVDRCVSIDH--------------------FLVPLSLIERWGSAMDIVYPDSKR 224
E E+DR D FL P SL+ R+ +DIV P SKR
Sbjct: 231 KLETAGEIDRKHQQDSDLSVQMLKDFLEDDIDKHSFFLPPKSLL-RYALLLDIVKPTSKR 289
Query: 225 CCCFTKSYYRYVKGTGSLLAT---VQPKNKGKA-SSLKEQ---------HLRYFTPREVA 271
CFTK Y RY++GTGS+L T VQ +N K+ +SL ++ LR+FTP+E+A
Sbjct: 290 SMCFTKGYGRYIEGTGSVLQTTEDVQIENIYKSLTSLSQEEKIMRLSMLQLRFFTPKEIA 349
Query: 272 NLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYL 311
NL FP +F FP +++QRY LLGNSL++ VVA L++ L
Sbjct: 350 NLLGFPPEFGFPEMTTVKQRYRLLGNSLNVHVVAKLIKIL 389
>gi|332217175|ref|XP_003257732.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase [Nomascus
leucogenys]
Length = 393
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 118/327 (36%), Positives = 183/327 (55%), Gaps = 32/327 (9%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
L+SPPCQP+TR G Q +D+R SFL IL+++P K P + +ENV GFE S T +
Sbjct: 74 LMSPPCQPFTRIGRQGDMTDSRTNSFLYILDILPRLQKLPKYILLENVKGFEVSSTRDLL 133
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRC---QLLNNQLLRS-- 120
I+ + N + QEF+LSP G+P SR RYF +AK +PL F+ L+ + S
Sbjct: 134 IQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPGQVLMEFPKIESVH 193
Query: 121 PSPLLGNDDMTVITKHDQPDDSWDKLLESC--DPVERFLEFSNSGDQVNTETGFLSTGTA 178
P + + + K+ +P+ S+D ++ D + LE + + N + LS
Sbjct: 194 PQKYAMDVENKIQEKNIEPNISFDSSMQCSGKDAILFKLETAEEIHRKNQQDSDLS--VK 251
Query: 179 AVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKG 238
+ DF ++ ++ +L+P + R+ +DIV P +R CFTK Y Y++G
Sbjct: 252 MLKDF--------LEDDTDMNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSYIEG 303
Query: 239 TGSLLAT---VQPKNKGKA-SSLKEQH---------LRYFTPREVANLHSFPGDFQFPHH 285
TGS+L T VQ +N K+ ++L ++ LRYFTP+E+ANL FP +F FP
Sbjct: 304 TGSVLQTAEDVQVENVYKSLTNLSQEQQITKLLMLKLRYFTPKEIANLLGFPPEFGFPEK 363
Query: 286 LSLRQRYALLGNSLSIAVVAPLLQYLF 312
++++QRY LLGNSL++ VVA L++ L+
Sbjct: 364 ITVKQRYRLLGNSLNVHVVAKLIKILY 390
>gi|4758184|ref|NP_004403.1| tRNA (cytosine(38)-C(5))-methyltransferase [Homo sapiens]
gi|17374834|sp|O14717.1|TRDMT_HUMAN RecName: Full=tRNA (cytosine(38)-C(5))-methyltransferase; AltName:
Full=DNA (cytosine-5)-methyltransferase-like protein 2;
Short=Dnmt2; AltName: Full=DNA methyltransferase homolog
HsaIIP; Short=DNA MTase homolog HsaIIP; Short=M.HsaIIP;
AltName: Full=PuMet
gi|2627431|gb|AAC51939.1| putative DNA methyltransferase [Homo sapiens]
gi|2894544|emb|CAA11272.1| DNA methyltransferase [Homo sapiens]
gi|47496579|emb|CAG29312.1| DNMT2 [Homo sapiens]
gi|119606623|gb|EAW86217.1| hCG23994, isoform CRA_a [Homo sapiens]
gi|158256270|dbj|BAF84106.1| unnamed protein product [Homo sapiens]
gi|167887559|gb|ACA05983.1| tRNA aspartic acid methyltransferase 1 variant 3 [Homo sapiens]
gi|167887563|gb|ACA05987.1| tRNA aspartic acid methyltransferase 1 variant 4 [Homo sapiens]
Length = 391
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 120/327 (36%), Positives = 182/327 (55%), Gaps = 32/327 (9%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
L+SPPCQP+TR G Q +D+R SFL IL+++P K P + +ENV GFE S T +
Sbjct: 74 LMSPPCQPFTRIGRQGDMTDSRTNSFLHILDILPRLQKLPKYILLENVKGFEVSSTRDLL 133
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRC---QLLNNQLLRS-- 120
I+ + N + QEF+LSP G+P SR RYF +AK +PL F+ L+ + S
Sbjct: 134 IQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPGQVLMEFPKIESVH 193
Query: 121 PSPLLGNDDMTVITKHDQPDDSWDKLLESC--DPVERFLEFSNSGDQVNTETGFLSTGTA 178
P + + + K+ +P+ S+D ++ D + LE + + N + LS
Sbjct: 194 PQKYAMDVENKIQEKNVEPNISFDGSIQCSGKDAILFKLETAEEIHRKNQQDSDLS--VK 251
Query: 179 AVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKG 238
+ DF ++ ++ +L+P + R+ +DIV P +R CFTK Y Y++G
Sbjct: 252 MLKDF--------LEDDTDVNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSYIEG 303
Query: 239 TGSLLAT---VQPKNKGKA---SSLKEQ-------HLRYFTPREVANLHSFPGDFQFPHH 285
TGS+L T VQ +N K+ S +EQ LRYFTP+E+ANL FP +F FP
Sbjct: 304 TGSVLQTAEDVQVENIYKSLTNLSQEEQITKLLILKLRYFTPKEIANLLGFPPEFGFPEK 363
Query: 286 LSLRQRYALLGNSLSIAVVAPLLQYLF 312
++++QRY LLGNSL++ VVA L++ L+
Sbjct: 364 ITVKQRYRLLGNSLNVHVVAKLIKILY 390
>gi|332833684|ref|XP_001151840.2| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase isoform 4
[Pan troglodytes]
gi|397522331|ref|XP_003831225.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase [Pan
paniscus]
gi|29126973|gb|AAH47733.1| TRNA aspartic acid methyltransferase 1 [Homo sapiens]
gi|410293242|gb|JAA25221.1| tRNA aspartic acid methyltransferase 1 [Pan troglodytes]
gi|410348740|gb|JAA40974.1| tRNA aspartic acid methyltransferase 1 [Pan troglodytes]
Length = 391
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 120/327 (36%), Positives = 182/327 (55%), Gaps = 32/327 (9%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
L+SPPCQP+TR G Q +D+R SFL IL+++P K P + +ENV GFE S T +
Sbjct: 74 LMSPPCQPFTRIGRQGDMTDSRTNSFLYILDILPRLQKLPKYILLENVKGFEVSSTRDLL 133
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRC---QLLNNQLLRS-- 120
I+ + N + QEF+LSP G+P SR RYF +AK +PL F+ L+ + S
Sbjct: 134 IQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPGQVLMEFPKIESVH 193
Query: 121 PSPLLGNDDMTVITKHDQPDDSWDKLLESC--DPVERFLEFSNSGDQVNTETGFLSTGTA 178
P + + + K+ +P+ S+D ++ D + LE + + N + LS
Sbjct: 194 PQKYAMDVENKIQEKNVEPNISFDGSIQCSGKDAILFKLETAEEIHRKNQQDSDLS--VK 251
Query: 179 AVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKG 238
+ DF ++ ++ +L+P + R+ +DIV P +R CFTK Y Y++G
Sbjct: 252 MLKDF--------LEDDTDVNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSYIEG 303
Query: 239 TGSLLAT---VQPKNKGKA---SSLKEQ-------HLRYFTPREVANLHSFPGDFQFPHH 285
TGS+L T VQ +N K+ S +EQ LRYFTP+E+ANL FP +F FP
Sbjct: 304 TGSVLQTAEDVQVENIYKSLTNLSQEEQITKLLILKLRYFTPKEIANLLGFPPEFGFPEK 363
Query: 286 LSLRQRYALLGNSLSIAVVAPLLQYLF 312
++++QRY LLGNSL++ VVA L++ L+
Sbjct: 364 ITVKQRYRLLGNSLNVHVVAKLIKILY 390
>gi|49523271|gb|AAH75465.1| MGC89267 protein [Xenopus (Silurana) tropicalis]
Length = 379
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 122/331 (36%), Positives = 171/331 (51%), Gaps = 39/331 (11%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
L+SPPCQP+TR GLQ SD R SFL +L+++P K P + +ENV GFETS+ +
Sbjct: 59 LMSPPCQPFTRIGLQGDISDPRTKSFLYVLDVLPRLKKQPAYILLENVKGFETSEAREAL 118
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGN 127
I L Y QEF+LSP G+P SR RYF +AK + F + L PS G+
Sbjct: 119 IRTLEKGGYAYQEFLLSPTCLGIPNSRLRYFLIAKLQKEPFAFPTTSKILEEFPSQCPGS 178
Query: 128 DDMTVITKHDQPDDSWDKLLES-------CDPVERFL-EFSNSGDQVNTETGFLSTGTAA 179
+ ++ + P ++ S CDP + L + + + +T +
Sbjct: 179 KRIFHCSESN-PQAGVEQKYSSCPLSGTDCDPEKTVLYKLETAVELQRKQTQDNDSSVRM 237
Query: 180 VDDF--GAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVK 237
+ DF G EE + +FL P SL+ R+ +DIV P +R CFTK Y YV+
Sbjct: 238 LQDFLEGNVEEMSQ--------YFLPPKSLL-RYALILDIVKPTCRRSTCFTKGYGHYVE 288
Query: 238 GTGSLLAT----------------VQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQ 281
GTGS+L T + + K SSLK +RYFTPRE+ANLH FP F
Sbjct: 289 GTGSVLQTATDVEIDTVYKSLDLLTEEEKLAKLSSLK---MRYFTPREIANLHGFPATFG 345
Query: 282 FPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 312
FP ++ +QRY LLGNSL++ +V+ L+ L
Sbjct: 346 FPEEVTKKQRYRLLGNSLNVHIVSCLISTLL 376
>gi|32441269|ref|NP_861528.1| tRNA (cytosine-5-)-methyltransferase [Bos taurus]
gi|75046080|sp|Q7YS61.1|TRDMT_BOVIN RecName: Full=tRNA (cytosine-5-)-methyltransferase; AltName:
Full=DNA (cytosine-5)-methyltransferase-like protein 2;
Short=Dnmt2
gi|31074159|gb|AAP20550.1| DNA cytosine-5 methyltransferase 2 [Bos taurus]
gi|296481442|tpg|DAA23557.1| TPA: tRNA (cytosine-5-)-methyltransferase [Bos taurus]
Length = 391
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 123/340 (36%), Positives = 175/340 (51%), Gaps = 54/340 (15%)
Query: 5 HAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTH 64
+ L+SPPCQP+TR GLQ +D R SFL IL+++P K P + +ENV GFE S T
Sbjct: 71 NMILMSPPCQPFTRIGLQGDVTDPRTNSFLHILDILPRLQKLPKYILLENVKGFEMSSTR 130
Query: 65 AKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPL 124
+I+ + N + QEF+LSP G+P SR RYF +AK +P F Q L+ P
Sbjct: 131 DLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQPEPFPFQAPGQVLMEFPK-- 188
Query: 125 LGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFG 184
T+ + P E+ E +G ++ ++ +G A+
Sbjct: 189 ---------TESEHPPKYAIN-------AEKKTEEKKTGPKICFDSSTQCSGKEAI--LF 230
Query: 185 AAEETVEVDRCVSIDH--------------------FLVPLSLIERWGSAMDIVYPDSKR 224
E E+DR D FL P SL+ R+ +DIV P S+R
Sbjct: 231 KLETAGEIDRKHQQDSDLSVRMLKDFLEDDIDKHSFFLPPKSLL-RYALLLDIVKPTSRR 289
Query: 225 CCCFTKSYYRYVKGTGSLLAT---VQPKNKGKA-SSLKEQ---------HLRYFTPREVA 271
CFTK Y RY++GTGS+L T VQ +N K+ +SL ++ LR+FTP+E+A
Sbjct: 290 SMCFTKGYGRYIEGTGSVLQTTEDVQIENIYKSLTSLSQEEKIMRLSMLQLRFFTPKEIA 349
Query: 272 NLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYL 311
NL FP +F FP +++QRY LLGNSL++ VVA L++ L
Sbjct: 350 NLLGFPPEFGFPEMTTVKQRYRLLGNSLNVHVVAKLIKIL 389
>gi|426240827|ref|XP_004014295.1| PREDICTED: tRNA (cytosine-5-)-methyltransferase-like [Ovis aries]
Length = 386
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 117/322 (36%), Positives = 166/322 (51%), Gaps = 23/322 (7%)
Query: 5 HAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTH 64
+ L+SPPCQP+TR GLQ +D R SFL IL+++P K P + VENV GFE S
Sbjct: 71 NMILMSPPCQPFTRIGLQGDVTDPRTNSFLYILDILPRLQKLPKYILVENVKGFEVSSAR 130
Query: 65 AKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPL 124
+I+ + N + QEF+LSP G+P SR RYF +AK +P F Q L+ P
Sbjct: 131 DLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQPEPFPFQAPGQVLMEFPKTE 190
Query: 125 LGNDDMTVIT--KHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDD 182
+ I K +P+ +D + + +G+ + D
Sbjct: 191 SEHSPQYAINAEKKTEPNICFDSSTQCSGKEAILFKLETAGEIDRKRQQDSDLSVRILKD 250
Query: 183 FGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSL 242
F E+ ++ FL P SL+ R+ +DIV P S+R CFTK Y RY++GTGS+
Sbjct: 251 F--LEDNIDKH-----SFFLPPKSLL-RYALLLDIVKPTSRRSMCFTKGYGRYIEGTGSV 302
Query: 243 LAT---VQPKN----------KGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLR 289
L VQ +N + K L LR+FTP+E+ANL FP +F FP +++
Sbjct: 303 LQMTEDVQIENIYKSLTSLSPEEKIMRLSMLQLRFFTPKEIANLLGFPPEFGFPEMTTVK 362
Query: 290 QRYALLGNSLSIAVVAPLLQYL 311
QRY LLGNSL++ VVA L++ L
Sbjct: 363 QRYRLLGNSLNVHVVAKLIKIL 384
>gi|403278153|ref|XP_003930688.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase [Saimiri
boliviensis boliviensis]
Length = 391
Score = 184 bits (466), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 118/327 (36%), Positives = 180/327 (55%), Gaps = 32/327 (9%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
L+SPPCQP+TR G Q +D+R SFL IL+++P + P + +ENV GFE S T +
Sbjct: 74 LMSPPCQPFTRIGRQGDMTDSRTNSFLYILDILPRLQRLPKYILLENVKGFEVSSTRDLL 133
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRC---QLLNNQLLRSPS 122
+ + N + QEF+LSP G+P SR RYF +AK +PL F+ L+ + S
Sbjct: 134 LRTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPGQVLMEFPKIESAH 193
Query: 123 PLLGNDDM--TVITKHDQPDDSWDKLLESC--DPVERFLEFSNSGDQVNTETGFLSTGTA 178
P D+ + K+ +P+ S+D ++ D + LE + + N + LS
Sbjct: 194 PQKYALDVEYKIQGKNTEPNVSFDSSIQCSGKDAILFKLETAEEIHRKNQQDSDLS--VQ 251
Query: 179 AVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKG 238
+ DF ++ + ++ +L+P + R+ +DIV P +R CFTK Y YV+G
Sbjct: 252 MLKDF--------LEDDIDMNQYLLPPKSLLRYALLLDIVQPTCRRSMCFTKGYGSYVEG 303
Query: 239 TGSLLAT---VQPKN----------KGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHH 285
TGS+L T VQ +N + K + L LRYFTP+E+ANL FP +F FP
Sbjct: 304 TGSVLQTAEDVQIENIYKSLTNLSQEEKITKLLMLKLRYFTPKEIANLLGFPPEFGFPEK 363
Query: 286 LSLRQRYALLGNSLSIAVVAPLLQYLF 312
++++QRY LLGNSL++ VVA L++ L+
Sbjct: 364 ITVKQRYRLLGNSLNVHVVAKLIKILY 390
>gi|348041390|ref|NP_001004959.2| tRNA (cytosine(38)-C(5))-methyltransferase [Xenopus (Silurana)
tropicalis]
Length = 395
Score = 184 bits (466), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 121/331 (36%), Positives = 169/331 (51%), Gaps = 39/331 (11%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
L+SPPCQP+TR GLQ SD R SFL +L+++P K P + +ENV GFETS+ +
Sbjct: 75 LMSPPCQPFTRIGLQGDISDPRTKSFLYVLDVLPRLKKQPAYILLENVKGFETSEAREAL 134
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGN 127
I L Y QEF+LSP G+P SR RYF +AK + F + L PS G+
Sbjct: 135 IRTLEKGGYAYQEFLLSPTCLGIPNSRLRYFLIAKLQKEPFAFPTTSKILEEFPSQCPGS 194
Query: 128 DDMTVITKHDQPDDSWDKLLES-------CDPVERFL-EFSNSGDQVNTETGFLSTGTAA 179
+ + P ++ S CDP + L + + + +T +
Sbjct: 195 KRI-IHCSESNPQARVEQKYSSCPLSGTDCDPEKTVLYKLETAVELQRKQTQDNDSSVRM 253
Query: 180 VDDF--GAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVK 237
+ DF G EE + +FL P SL+ R+ +DIV P +R CFTK Y YV+
Sbjct: 254 LQDFLEGNVEEMSQ--------YFLPPKSLL-RYALILDIVKPTCRRSTCFTKGYGHYVE 304
Query: 238 GTGSLLAT----------------VQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQ 281
GTGS+L T + + K SSLK +RYFTPRE++NLH FP F
Sbjct: 305 GTGSVLQTATDVEIDTVYKSLDLLTEEEKLAKLSSLK---MRYFTPREISNLHGFPATFG 361
Query: 282 FPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 312
FP ++ +QRY LLGNSL++ +V+ L+ L
Sbjct: 362 FPEEVTKKQRYRLLGNSLNVHIVSCLISTLL 392
>gi|296206220|ref|XP_002750112.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase isoform 1
[Callithrix jacchus]
Length = 391
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 119/327 (36%), Positives = 179/327 (54%), Gaps = 32/327 (9%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
L+SPPCQP+TR G Q +D+R SFL IL+++P + P + +ENV GFE S T +
Sbjct: 74 LMSPPCQPFTRIGRQGDMTDSRTNSFLYILDILPRLQRLPKYILLENVKGFEVSSTRDLL 133
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRC---QLLNNQLLRSPS 122
++ + N + QEF+LSP G+P SR RYF +AK +PL F+ L+ + S
Sbjct: 134 LQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPGQVLMEFPKIESAH 193
Query: 123 PLLGNDDM--TVITKHDQPDDSWDKLLESC--DPVERFLEFSNSGDQVNTETGFLSTGTA 178
P D+ + K+ P+ S+D + D + LE + + N + LS
Sbjct: 194 PQKYAMDVENKIQGKNTDPNISFDSSIHCSGKDAILFKLETAEEIHRKNQQDSDLS--VQ 251
Query: 179 AVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKG 238
+ DF ++ V ++ +L+P + R+ +DIV P +R CFTK Y Y++G
Sbjct: 252 MLKDF--------LEDDVDMNQYLLPPKSLLRYALLLDIVQPTCRRSMCFTKGYGSYIEG 303
Query: 239 TGSLLAT---VQPKN----------KGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHH 285
TGS+L T VQ +N + K + L LRYFTP+EVANL FP +F FP
Sbjct: 304 TGSVLQTAEDVQIENIYKSLTNLSQEEKITKLLMLKLRYFTPKEVANLLGFPPEFGFPEK 363
Query: 286 LSLRQRYALLGNSLSIAVVAPLLQYLF 312
++++QRY LLGNSL++ VVA L++ L+
Sbjct: 364 ITVKQRYRLLGNSLNVHVVAKLIKILY 390
>gi|224044835|ref|XP_002192893.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase [Taeniopygia
guttata]
Length = 399
Score = 183 bits (465), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 129/344 (37%), Positives = 179/344 (52%), Gaps = 58/344 (16%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
LLSPPCQP+TR GLQ SD R+ SFL IL+++P K P L +ENV GFE+S ++
Sbjct: 74 LLSPPCQPFTRTGLQGDVSDPRSKSFLYILDILPRLQKLPKYLLLENVKGFESSSARNEL 133
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRC--QLLNNQLLRSPSP 123
++ LA + QEF+LSP G+P SR RYF +AK ++P SF+ Q+L + P
Sbjct: 134 LQTLATCGFKYQEFLLSPTCLGIPNSRLRYFLIAKLQQEPFSFQAPGQILTRFPDQDPEG 193
Query: 124 LL--------GNDDMTVITKHDQ------PDDSWDKL--------LESCDPVERFLEFSN 161
+L G ++ T+ PD S L LE+ + +ER
Sbjct: 194 VLKEKVADKVGETSSSLSTEEKNLDPNIGPDSSSKSLPKGPFLFKLETVEEMER------ 247
Query: 162 SGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPD 221
+Q N + + DF EE E+ + +FL P SL+ R+ +DIV P
Sbjct: 248 KHNQDN------DSSIQMLKDF-LEEENEEMSQ-----YFLPPKSLL-RYALLLDIVKPT 294
Query: 222 SKRCCCFTKSYYRYVKGTGSLLATV-------------QPKNKGKASSLKEQHLRYFTPR 268
+R CFTK Y YV+GTGS+L T + + K L LRYFTPR
Sbjct: 295 CRRSTCFTKGYGHYVEGTGSVLQTAVDVQLESVFKHIDELPEEEKLIKLSTLKLRYFTPR 354
Query: 269 EVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 312
E+ANLH FP +F FP ++++Q Y LLGNSL++ VVA L+ L
Sbjct: 355 EIANLHGFPLEFGFPEKVTVKQCYRLLGNSLNVHVVAKLISILL 398
>gi|410963252|ref|XP_003988179.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase [Felis catus]
Length = 391
Score = 183 bits (465), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 126/335 (37%), Positives = 182/335 (54%), Gaps = 42/335 (12%)
Query: 5 HAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTH 64
+ L+SPPCQP+TR GLQ +D R S L IL+++P K P + +ENV GFE S T
Sbjct: 71 NMILMSPPCQPFTRIGLQGDVTDPRTNSLLHILDILPRLQKLPKYILLENVKGFEVSSTR 130
Query: 65 AKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRC--QLLNN-QLLR 119
+I+ + N + QEF+LSP G+P SR RYF +AK +PL F+ Q+L L
Sbjct: 131 DLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPGQVLKEFPKLE 190
Query: 120 SPSPLLGNDDMTVIT------KHDQPDDSWDKLLESCDPVERFL---EFSNSGDQVNTET 170
S P + T++ K +P+ +D C E L E D+ + +
Sbjct: 191 SEHP----EKNTIVAENKIERKKIEPNICFDNG-RQCSGKEAILFKLETIEEIDRKHQQD 245
Query: 171 GFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTK 230
LS + DF E+ ++ ++ +FL P SL+ R+ +DIV P +R CFTK
Sbjct: 246 SDLSV--QMLKDF--LEDDIDTNQ-----YFLPPKSLL-RYALLLDIVKPTCRRSTCFTK 295
Query: 231 SYYRYVKGTGSLLAT---VQPKN----------KGKASSLKEQHLRYFTPREVANLHSFP 277
Y Y++GTGS+L T VQ +N + K + L LRYFTP+E+ANL FP
Sbjct: 296 GYGSYIEGTGSVLQTSEDVQIENVYKSLTNLSQEEKITKLSMLKLRYFTPKEIANLLGFP 355
Query: 278 GDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 312
DF FP ++++QRY LLGNSL++ VVA L++ L+
Sbjct: 356 PDFGFPEKITVKQRYRLLGNSLNVHVVAELIKILY 390
>gi|402913885|ref|XP_003919381.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase [Papio
anubis]
Length = 391
Score = 183 bits (465), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 121/326 (37%), Positives = 180/326 (55%), Gaps = 32/326 (9%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
L+SPPCQP+TR G Q +D+R SFL IL+++P K P + +ENV GFE S T
Sbjct: 74 LMSPPCQPFTRIGRQGDMTDSRTNSFLHILDILPRLQKLPKYILLENVKGFEVSSTRDLF 133
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRC---QLLNNQLLRSPS 122
I+ + N + QEF+LSP G+P SR RYF +AK +PL F+ L+ + S
Sbjct: 134 IQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPGQVLMQFPKIESVH 193
Query: 123 PLLGNDDM--TVITKHDQPDDSWDKLLESC--DPVERFLEFSNSGDQVNTETGFLSTGTA 178
P D+ + K+ +P+ S+D + D + LE + + N + LS
Sbjct: 194 PQKDTMDVENKIQEKNIEPNISFDSSTQCSGKDAILFKLETAEEIHRKNQQDSDLS--VK 251
Query: 179 AVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKG 238
+ DF ++ ++ +L+P + R+ +DIV P +R CFTK Y Y++G
Sbjct: 252 MLKDF--------LEDDTDMNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSYIEG 303
Query: 239 TGSLLAT---VQPKNKGKA---SSLKEQ-------HLRYFTPREVANLHSFPGDFQFPHH 285
TGS+L T VQ +N K+ S +EQ LRYFTP+E+ANL FP +F FP +
Sbjct: 304 TGSVLQTAEDVQIENIYKSLTKLSQEEQITKLLMLKLRYFTPKEIANLLGFPPEFGFPEN 363
Query: 286 LSLRQRYALLGNSLSIAVVAPLLQYL 311
++++QRY LLGNSL++ VVA L++ L
Sbjct: 364 ITVKQRYRLLGNSLNVHVVAKLIKIL 389
>gi|198430517|ref|XP_002128135.1| PREDICTED: similar to DNA methyltransferase 2 [Ciona intestinalis]
Length = 343
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/315 (37%), Positives = 174/315 (55%), Gaps = 50/315 (15%)
Query: 3 GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD 62
G + ++SPPCQP+TR GLQK +D R SF+ +++++P PP + +ENV GFE S
Sbjct: 71 GFNTLMMSPPCQPFTRVGLQKDINDPRTRSFIYLMKVLPQLSNPPTYILMENVKGFENSK 130
Query: 63 THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPS 122
H +++L +Y T +F+L+P QFGVP SR RY+ LAKRKPL F ++ +P+
Sbjct: 131 AHDMFLQVLEQLEYSTAQFLLTPKQFGVPNSRLRYYLLAKRKPLQFPDEV------NTPN 184
Query: 123 PLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDD 182
++ ++ + L+ C SN+G + N E + T +++
Sbjct: 185 EVI---------------ETMPQALQKCLN-------SNAGKEQN-EKHTIKTLENYLEE 221
Query: 183 FGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSL 242
AE T++ +H L +L+ R+ MDIV P + CFTKSY Y +GTGS+
Sbjct: 222 ---AESTLK-------EHALTEKTLL-RYLQVMDIVTPRHQSSTCFTKSYGYYAEGTGSV 270
Query: 243 LATVQPKNKG---KASSLKEQHLRYFTPREVANLHSFPGD-FQFPHHLSLRQRYALLGNS 298
L N G K S+ +LRYFT REVAN+ FP D F FP + + +Q+Y LLGNS
Sbjct: 271 L------NMGGEIKMSNPLHNNLRYFTAREVANIMCFPKDKFHFPENFTRKQKYKLLGNS 324
Query: 299 LSIAVVAPLLQYLFA 313
L++ VV+ LL+ L
Sbjct: 325 LNVYVVSCLLKLLIT 339
>gi|431917686|gb|ELK16951.1| tRNA (cytosine-5-)-methyltransferase [Pteropus alecto]
Length = 391
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 120/326 (36%), Positives = 177/326 (54%), Gaps = 32/326 (9%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
L+SPPCQP+TR GLQ +D R SF+ IL+++P K P + +ENV GFE S T +
Sbjct: 74 LMSPPCQPFTRIGLQGDVTDPRTNSFIYILDILPRLQKLPKFILLENVKGFEISSTRDLL 133
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRCQLLNNQLLRSPS--- 122
I+ + + + QEF+LSP G+P SR RYF +AK +PL F Q L+ P
Sbjct: 134 IQTIESCGFQYQEFLLSPTSLGIPNSRLRYFLVAKLQSEPLPF--QAPGQVLMEFPKIEC 191
Query: 123 ----PLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTA 178
+ + T+ K +P+ S+D + + +G+
Sbjct: 192 EHTQKRAVDAENTIEGKKIEPNVSFDSSKQCSGKEAILFKLETAGEIERKHQQDSDLSVQ 251
Query: 179 AVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKG 238
+ DF +E D +S +FL P L+ R+ +DIV P +R CFTK Y RY++G
Sbjct: 252 MLKDF------LEDDADMS-QYFLPPKPLL-RYALLLDIVKPTCRRSMCFTKGYGRYIEG 303
Query: 239 TGSLLAT---VQPKNKGKA-SSLKEQH---------LRYFTPREVANLHSFPGDFQFPHH 285
TGS+L T VQ +N K+ +SL ++ LRYFTP+E+ANLH FP +F FP
Sbjct: 304 TGSVLQTAEDVQIENIYKSLTSLSQEEKIKKLLMLKLRYFTPKEIANLHGFPPEFGFPET 363
Query: 286 LSLRQRYALLGNSLSIAVVAPLLQYL 311
++++QRY LLGNSL++ +VA L++ L
Sbjct: 364 VTMKQRYRLLGNSLNVHIVAKLIKIL 389
>gi|355782667|gb|EHH64588.1| tRNA (cytosine-5-)-methyltransferase [Macaca fascicularis]
Length = 391
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/326 (37%), Positives = 179/326 (54%), Gaps = 32/326 (9%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
L+SPPCQP+TR G Q +D+R SFL IL ++P K P + +ENV GFE S T +
Sbjct: 74 LMSPPCQPFTRIGRQGDMTDSRTNSFLYILNILPRLQKLPKYILLENVKGFEVSSTRDLL 133
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRC---QLLNNQLLRSPS 122
I+ + N + QEF+LSP G+P SR RYF +AK +PL F+ L+ + S
Sbjct: 134 IQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPGQVLMQFPKIESVH 193
Query: 123 PLLGNDDM--TVITKHDQPDDSWDKLLESC--DPVERFLEFSNSGDQVNTETGFLSTGTA 178
P D+ + K+ +P+ S+D + D + LE + + N + LS
Sbjct: 194 PQKYTVDVENKIQEKNIEPNISFDSSTQGSGKDAILFKLETAEEIHRKNQQDSDLS--VK 251
Query: 179 AVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKG 238
+ DF ++ ++ +L+P + R+ +DIV P +R CFTK Y Y++G
Sbjct: 252 MLKDF--------LEDDTDMNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSYIEG 303
Query: 239 TGSLLAT---VQPKNKGKA---SSLKEQ-------HLRYFTPREVANLHSFPGDFQFPHH 285
TGS+L T VQ +N K+ S +EQ LRYFTP+E+ANL FP +F FP
Sbjct: 304 TGSVLQTAEDVQIENIYKSLTKLSQEEQITKLLMLKLRYFTPKEIANLLGFPPEFGFPEK 363
Query: 286 LSLRQRYALLGNSLSIAVVAPLLQYL 311
++++QRY LLGNSL++ VVA L++ L
Sbjct: 364 ITVKQRYRLLGNSLNVHVVAKLIKIL 389
>gi|301766512|ref|XP_002918675.1| PREDICTED: tRNA (cytosine-5-)-methyltransferase-like [Ailuropoda
melanoleuca]
Length = 391
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 119/329 (36%), Positives = 177/329 (53%), Gaps = 30/329 (9%)
Query: 5 HAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTH 64
+ L+SPPCQP+TR GLQ +D R S L IL+++P K P + +ENV GFE S
Sbjct: 71 NTILMSPPCQPFTRIGLQGDVTDPRTNSLLYILDILPRLQKLPKYILLENVKGFEVSSAR 130
Query: 65 AKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRC---QLLNNQLLR 119
+I+ L N + QEF+LSP G+P SR RYF +AK +PL F+ L+ +
Sbjct: 131 DLLIQTLENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQVPGQVLMEFPKIE 190
Query: 120 SPSPLLGNDD--MTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLST-G 176
S P D + + +P+ +DK C E L + ++++ + S
Sbjct: 191 SEHPERNTIDGENKIEREKIEPNICFDK-SRQCSGKEAILFKLETVEEIDRKLHQDSDLS 249
Query: 177 TAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYV 236
+ DF E+ V+V++ +FL P SL+ R+ +DIV P +R CFTK Y Y+
Sbjct: 250 VQMLKDF--LEDDVDVNQ-----YFLPPKSLL-RYALLLDIVKPTCRRSTCFTKGYGSYI 301
Query: 237 KGTGSLLATVQP-------------KNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFP 283
+GTGS+L T + + K + L LRYFTP+E+ANL FP +F FP
Sbjct: 302 EGTGSVLQTTEDVQIEDIYKSLTNLSQEEKIAKLLMLKLRYFTPKEIANLLGFPSEFGFP 361
Query: 284 HHLSLRQRYALLGNSLSIAVVAPLLQYLF 312
++++QRY LLGNSL++ VVA L++ L+
Sbjct: 362 EKITVKQRYRLLGNSLNVRVVAKLIKILY 390
>gi|355562318|gb|EHH18912.1| tRNA (cytosine-5-)-methyltransferase [Macaca mulatta]
Length = 391
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/326 (37%), Positives = 179/326 (54%), Gaps = 32/326 (9%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
L+SPPCQP+TR G Q +D+R SFL IL ++P K P + +ENV GFE S T +
Sbjct: 74 LMSPPCQPFTRIGRQGDMTDSRTNSFLYILNILPRLQKLPKYILLENVKGFEVSSTRDLL 133
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRC---QLLNNQLLRSPS 122
I+ + N + QEF+LSP G+P SR RYF +AK +PL F+ L+ + S
Sbjct: 134 IQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPGQVLMQFPKIESVY 193
Query: 123 PLLGNDDM--TVITKHDQPDDSWDKLLESC--DPVERFLEFSNSGDQVNTETGFLSTGTA 178
P D+ + K+ +P+ S+D + D + LE + + N + LS
Sbjct: 194 PQKYTMDVENKIQEKNIEPNISFDSSTQRSGKDAILFKLETAEEIHRKNQQDSDLS--VK 251
Query: 179 AVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKG 238
+ DF ++ ++ +L+P + R+ +DIV P +R CFTK Y Y++G
Sbjct: 252 MLKDF--------LEDDTDMNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSYIEG 303
Query: 239 TGSLLAT---VQPKNKGKA---SSLKEQ-------HLRYFTPREVANLHSFPGDFQFPHH 285
TGS+L T VQ +N K+ S +EQ LRYFTP+E+ANL FP +F FP
Sbjct: 304 TGSVLQTAEDVQIENIYKSLTKLSQEEQITKLLMLKLRYFTPKEIANLLGFPPEFGFPEK 363
Query: 286 LSLRQRYALLGNSLSIAVVAPLLQYL 311
++++QRY LLGNSL++ VVA L++ L
Sbjct: 364 ITVKQRYRLLGNSLNVHVVAKLIKIL 389
>gi|281338132|gb|EFB13716.1| hypothetical protein PANDA_007177 [Ailuropoda melanoleuca]
Length = 372
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 119/329 (36%), Positives = 177/329 (53%), Gaps = 30/329 (9%)
Query: 5 HAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTH 64
+ L+SPPCQP+TR GLQ +D R S L IL+++P K P + +ENV GFE S
Sbjct: 52 NTILMSPPCQPFTRIGLQGDVTDPRTNSLLYILDILPRLQKLPKYILLENVKGFEVSSAR 111
Query: 65 AKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRC---QLLNNQLLR 119
+I+ L N + QEF+LSP G+P SR RYF +AK +PL F+ L+ +
Sbjct: 112 DLLIQTLENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQVPGQVLMEFPKIE 171
Query: 120 SPSPLLGNDD--MTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLST-G 176
S P D + + +P+ +DK C E L + ++++ + S
Sbjct: 172 SEHPERNTIDGENKIEREKIEPNICFDK-SRQCSGKEAILFKLETVEEIDRKLHQDSDLS 230
Query: 177 TAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYV 236
+ DF E+ V+V++ +FL P SL+ R+ +DIV P +R CFTK Y Y+
Sbjct: 231 VQMLKDF--LEDDVDVNQ-----YFLPPKSLL-RYALLLDIVKPTCRRSTCFTKGYGSYI 282
Query: 237 KGTGSLLATVQP-------------KNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFP 283
+GTGS+L T + + K + L LRYFTP+E+ANL FP +F FP
Sbjct: 283 EGTGSVLQTTEDVQIEDIYKSLTNLSQEEKIAKLLMLKLRYFTPKEIANLLGFPSEFGFP 342
Query: 284 HHLSLRQRYALLGNSLSIAVVAPLLQYLF 312
++++QRY LLGNSL++ VVA L++ L+
Sbjct: 343 EKITVKQRYRLLGNSLNVRVVAKLIKILY 371
>gi|380790109|gb|AFE66930.1| tRNA (cytosine(38)-C(5))-methyltransferase [Macaca mulatta]
Length = 391
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 121/326 (37%), Positives = 179/326 (54%), Gaps = 32/326 (9%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
L+SPPCQP+TR G Q +D+R SFL IL ++P K P + +ENV GFE S T +
Sbjct: 74 LMSPPCQPFTRIGRQGDMTDSRTNSFLYILNILPRLQKLPKYILLENVKGFEVSSTRDLL 133
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRC---QLLNNQLLRSPS 122
I+ + N + QEF+LSP G+P SR RYF +AK +PL F+ L+ + S
Sbjct: 134 IQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPGQVLMQFPKIESVY 193
Query: 123 PLLGNDDM--TVITKHDQPDDSWDKLLESC--DPVERFLEFSNSGDQVNTETGFLSTGTA 178
P D+ + K+ +P+ S+D + D + LE + + N + LS
Sbjct: 194 PQKYTMDVENKIQEKNIEPNISFDSSTQHSGKDAILFKLETAEEIHRKNQQDSDLS--VK 251
Query: 179 AVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKG 238
+ DF ++ ++ +L+P + R+ +DIV P +R CFTK Y Y++G
Sbjct: 252 MLKDF--------LEDDTDMNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSYIEG 303
Query: 239 TGSLLAT---VQPKNKGKA---SSLKEQ-------HLRYFTPREVANLHSFPGDFQFPHH 285
TGS+L T VQ +N K+ S +EQ LRYFTP+E+ANL FP +F FP
Sbjct: 304 TGSVLQTAEDVQIENIYKSLTKLSQEEQITKLLMLKLRYFTPKEIANLLGFPPEFGFPEK 363
Query: 286 LSLRQRYALLGNSLSIAVVAPLLQYL 311
++++QRY LLGNSL++ VVA L++ L
Sbjct: 364 ITVKQRYRLLGNSLNVHVVAKLIKIL 389
>gi|42766604|gb|AAS45432.1| At5g25480 [Arabidopsis thaliana]
Length = 176
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 84/99 (84%), Positives = 87/99 (87%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
Y A AWLLSPPCQPYTRQGLQK S DARAFSFL+ILELIPHT KPP MLFVENVVGFETS
Sbjct: 78 YNADAWLLSPPCQPYTRQGLQKHSGDARAFSFLRILELIPHTTKPPQMLFVENVVGFETS 137
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCL 100
DTH +MI L DY+TQEFILSPLQFGVPYSRPRYFCL
Sbjct: 138 DTHMEMIGTLTKLDYVTQEFILSPLQFGVPYSRPRYFCL 176
>gi|395827473|ref|XP_003786926.1| PREDICTED: LOW QUALITY PROTEIN: tRNA
(cytosine(38)-C(5))-methyltransferase [Otolemur
garnettii]
Length = 399
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 121/331 (36%), Positives = 178/331 (53%), Gaps = 38/331 (11%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
L+SPPCQP+TR GLQ +D R SFL L+++P K P + +ENV GFE S T +
Sbjct: 74 LMSPPCQPFTRIGLQGDMTDPRTNSFLYFLDILPRLRKLPKYILLENVKGFEVSSTRDLL 133
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRCQLLNNQLLRS----- 120
I+ + N + QEF+LSP G+P SR RYF +AK +PL F+ Q+L
Sbjct: 134 IQTMENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQNP---GQVLMEFPKIE 190
Query: 121 ---PSPLLGNDDMTVITKHDQPDDSWDKLLESC--DPVERFLEFSNSGDQVNTETGFLST 175
P + + + K +P D + D V LE + ++ + + LS
Sbjct: 191 CEYPQKCSIDAENKIEEKKIEPSICCDSSTQCSGRDAVLYKLETAEEIERKHQQDNDLSV 250
Query: 176 GTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRY 235
G EE +++++ +FL P SL+ R+ +DIV P +R CFTK Y Y
Sbjct: 251 QMLK----GFLEEDIDMNQ-----YFLPPQSLL-RYALLLDIVRPTCRRSTCFTKGYGSY 300
Query: 236 VKGTGSLLAT---VQPKN----------KGKASSLKEQHLRYFTPREVANLHSFPGDFQF 282
++GTGS+L T VQ +N + K + L LRYFTP+E+AN+ FP +F F
Sbjct: 301 IEGTGSVLQTAEDVQIENIYKSLPDLSQEEKITKLLMLKLRYFTPKEIANILGFPPEFGF 360
Query: 283 PHHLSLRQRYALLGNSLSIAVVAPLLQYLFA 313
P ++++QRY LLGNSL++ VVA L++ L+A
Sbjct: 361 PEEITVKQRYRLLGNSLNVHVVAKLIKILYA 391
>gi|326921696|ref|XP_003207092.1| PREDICTED: tRNA (cytosine-5-)-methyltransferase-like [Meleagris
gallopavo]
Length = 398
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 129/337 (38%), Positives = 174/337 (51%), Gaps = 43/337 (12%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
L+SPPCQP+TR GLQ SD R SFL IL+++P K P L +ENV GFE+S ++
Sbjct: 74 LMSPPCQPFTRIGLQGDVSDPRTKSFLYILDILPRLQKLPKYLLLENVKGFESSSARNEL 133
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGN 127
+ L + QEF+LSP G+P SR RYF +AK F + L R P +
Sbjct: 134 LRTLETCGFEYQEFLLSPTCLGIPNSRLRYFLIAKLHQEPFFFHVPGQILTRFP-----D 188
Query: 128 DDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAE 187
++ ++K D+ D+ S E+ L SN G +++ G L A + AE
Sbjct: 189 QNLEELSK----DEVVDEASSSLPSGEKSL-VSNIGSDCSSKNGPLPK-EAFLFKLETAE 242
Query: 188 ETVEV---DRCVSI---------------DHFLVPLSLIERWGSAMDIVYPDSKRCCCFT 229
E V D SI +FL P SL+ R+ +DIV P +R CFT
Sbjct: 243 EMVRKHSQDNDPSIQMLQDFLEDENEEMSQYFLAPKSLV-RYAFLLDIVKPTCRRSTCFT 301
Query: 230 KSYYRYVKGTGSLLAT---VQPKN----------KGKASSLKEQHLRYFTPREVANLHSF 276
K Y YV+GTGS+L T VQ ++ + K L LRYFTPRE+ANLH F
Sbjct: 302 KGYGHYVEGTGSVLQTAVDVQLESVFKHIENLTEEEKLMKLSTLKLRYFTPREIANLHGF 361
Query: 277 PGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFA 313
P +F FP +S++Q Y LLGNSL++ VVA L+ L
Sbjct: 362 PPEFGFPDKVSIKQCYRLLGNSLNVHVVAKLISILLG 398
>gi|72255517|ref|NP_001026813.1| tRNA (cytosine(38)-C(5))-methyltransferase [Rattus norvegicus]
gi|115311703|sp|Q4G073.1|TRDMT_RAT RecName: Full=tRNA (cytosine(38)-C(5))-methyltransferase; AltName:
Full=DNA (cytosine-5)-methyltransferase-like protein 2;
Short=Dnmt2
gi|71051331|gb|AAH98700.1| TRNA aspartic acid methyltransferase 1 [Rattus norvegicus]
gi|149021112|gb|EDL78719.1| DNA methyltransferase 2 [Rattus norvegicus]
Length = 391
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 121/339 (35%), Positives = 167/339 (49%), Gaps = 52/339 (15%)
Query: 5 HAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTH 64
+ L+SPPCQP+TR GLQ SD R SFL IL+++P K P + +ENV GFE S T
Sbjct: 71 NMILMSPPCQPFTRIGLQGDMSDRRTNSFLYILDILPRLQKLPKYILLENVKGFEVSSTR 130
Query: 65 AKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRC--QLLN---NQL 117
+I+ + + QEF+LSP G+P SR RYF +AK +PL F+ Q+L N
Sbjct: 131 GLLIQTMEACGFQYQEFLLSPSSLGIPNSRLRYFLIAKLQSEPLCFQAPGQILMEFPNSG 190
Query: 118 LRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFL------------EFSNSGDQ 165
P ++ + + +PD D C + L +S
Sbjct: 191 TVQPQEYAVVEEGKLRVRTREPDVCLDSSSTQCSGQDSILFKHETAADIDRKRQQDSDLS 250
Query: 166 VNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRC 225
V GFL G A +L+P + R+ +DIV P S+R
Sbjct: 251 VQMLKGFLEDGDTA--------------------QYLLPAKSLLRYALLLDIVKPTSRRS 290
Query: 226 CCFTKSYYRYVKGTGSLLAT---VQPKN----------KGKASSLKEQHLRYFTPREVAN 272
CFTK Y Y++GTGS+L T VQ +N + K + L LRYFTP+E+AN
Sbjct: 291 MCFTKGYGSYIEGTGSVLQTAEDVQIENIYKSLPDLPPEEKIAKLSMLKLRYFTPKEIAN 350
Query: 273 LHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYL 311
L FP +F FP +++QRY LLGNSL++ VV+ LL L
Sbjct: 351 LLGFPPEFGFPEKTTVKQRYRLLGNSLNVHVVSKLLTVL 389
>gi|145207311|gb|AAI14323.2| TRNA aspartic acid methyltransferase 1 [Danio rerio]
Length = 381
Score = 180 bits (457), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 118/327 (36%), Positives = 173/327 (52%), Gaps = 42/327 (12%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
L+SPPCQP+TR GLQ +D R SFL IL+L+P K P + +ENV GFE+S +
Sbjct: 77 LMSPPCQPFTRIGLQGDVADPRTKSFLYILDLLPRLSKRPRFILLENVKGFESSAARDAL 136
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGN 127
++ L DY QEF++SP G+P SR RYF +AKR P +F ++ +++
Sbjct: 137 LQTLRECDYSFQEFLISPTSLGIPNSRLRYFLIAKRAPETFSFP-VSTEIIEGFPMSEST 195
Query: 128 DDMTVITKHDQPDDSWDKL-------LESCDPVERFLEFSNSGDQVNTETGFLSTGTAAV 180
D ++V +D P S + LE+ + +ER + NS + V FL
Sbjct: 196 DGLSV--PYDHPTSSASEREKTIMFKLETEEDLERKRK-QNSQESVRRLLDFLQ------ 246
Query: 181 DDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTG 240
EE +E+ +L+P + R+ MDIV P S+R CFTK Y YV+GTG
Sbjct: 247 ----EEEEDMEL--------YLLPPKTLLRYALVMDIVQPSSRRSVCFTKGYGHYVEGTG 294
Query: 241 SLLATV-------------QPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLS 287
S+L + Q + K L LRYFTPRE++ L FP F FP H+S
Sbjct: 295 SVLQSCMDVDLETVFKNLDQLSEEDKLKQLLRLKLRYFTPREISRLMGFPDHFTFPKHIS 354
Query: 288 LRQRYALLGNSLSIAVVAPLLQYLFAQ 314
+Q+Y +LGNSL++ VV+ L++ + ++
Sbjct: 355 FKQQYRVLGNSLNVHVVSHLIRLMLSK 381
>gi|67514595|ref|NP_001020002.1| tRNA (cytosine-5-)-methyltransferase [Gallus gallus]
gi|66766328|dbj|BAD99025.1| DNA methyltransferase 2 [Gallus gallus]
Length = 398
Score = 180 bits (456), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 126/340 (37%), Positives = 172/340 (50%), Gaps = 49/340 (14%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
L+SPPCQP+TR GLQ SD R SFL IL+++P K P L +ENV GFE+S ++
Sbjct: 74 LMSPPCQPFTRIGLQGDVSDPRTKSFLYILDILPRLQKCPKYLLLENVKGFESSSARNEL 133
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGN 127
+ L + QEF+LSP G+P SR RYF +AK F + L R P +
Sbjct: 134 LRTLETCGFKYQEFLLSPTCLGIPNSRLRYFLIAKLHQEPFFFHVPGQILTRLP-----D 188
Query: 128 DDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAE 187
++ ++K D DK E+ L+ SN+ +++ G L G A + AE
Sbjct: 189 QNLEELSK----DKVVDKTGSXFPSGEKSLD-SNTSPDCSSKKGPLPKG-AFLFKLETAE 242
Query: 188 ETVEVDR------------------CVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFT 229
+ V R +FL P SL+ R+ +DIV P +R CFT
Sbjct: 243 QMVRKHRQDNDPSIQMLEDFLEEENEEMSQYFLAPKSLV-RYAFLLDIVKPTCRRSTCFT 301
Query: 230 KSYYRYVKGTGSLLAT----------------VQPKNKGKASSLKEQHLRYFTPREVANL 273
K Y YV+GTGS+L T + + K S+LK LRYFTPRE+ANL
Sbjct: 302 KGYGHYVEGTGSVLQTAVDVELESVFKHIENLTEEEKLMKLSTLK---LRYFTPREIANL 358
Query: 274 HSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFA 313
H FP +F FP +S++Q Y LLGNSL++ VVA L+ L
Sbjct: 359 HGFPPEFGFPDKVSIKQCYRLLGNSLNVRVVAKLISILLG 398
>gi|349501042|ref|NP_001079673.2| tRNA (cytosine(38)-C(5))-methyltransferase [Xenopus laevis]
Length = 396
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/323 (37%), Positives = 168/323 (52%), Gaps = 36/323 (11%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
L+SPPCQP+TR GLQ SD RA SFL +L+++P K P + +ENV GFE+S+ +
Sbjct: 73 LMSPPCQPFTRIGLQGDISDPRAKSFLYVLDILPRLKKLPAYILLENVKGFESSEAREAL 132
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPS--PLL 125
I L Y+ QEF+LSP G+P SR RYF +AK + F + N L PS +
Sbjct: 133 IGTLQKCGYVYQEFLLSPTCLGIPNSRLRYFLIAKLQTEPFAFPISNTILEEFPSQHSID 192
Query: 126 GNDDMTVITKHDQPDDSWDKLLESC-------DPVERFLEFSNSGDQVNTETGFLSTGTA 178
+ + P D+ SC P + FL + ++ + G + +
Sbjct: 193 PGRRRVIHCSENNPQAGADQKNPSCPFSGTDHGPEKTFLYKLETAQELERKQGQDNDASV 252
Query: 179 -AVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVK 237
+ DF E +VE +FL P SL+ R+ +DIV P +R CFTK Y YV+
Sbjct: 253 RMLQDF--LETSVEEMS----QYFLPPKSLL-RYALILDIVRPTCRRSTCFTKGYGHYVE 305
Query: 238 GTGSLLATV----------------QPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQ 281
GTGS+L T + + K SSLK +RYFTPRE+ANLH FP F
Sbjct: 306 GTGSVLQTATDVEIDSVYNSLELLNEEEKLAKLSSLK---MRYFTPREIANLHGFPETFG 362
Query: 282 FPHHLSLRQRYALLGNSLSIAVV 304
FP ++ +QRY LLGNSL++ +V
Sbjct: 363 FPEEVTTKQRYRLLGNSLNVHIV 385
>gi|126341517|ref|XP_001377353.1| PREDICTED: tRNA (cytosine-5-)-methyltransferase-like [Monodelphis
domestica]
Length = 384
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/345 (35%), Positives = 181/345 (52%), Gaps = 58/345 (16%)
Query: 5 HAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTH 64
+ L+SPPCQP+TR GLQ +D R SFL IL ++P K P + +ENV GFE S T
Sbjct: 62 NMILMSPPCQPFTRIGLQGDVTDPRTKSFLHILHVLPKLQKLPTYILLENVKGFEVSSTR 121
Query: 65 AKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRCQLLNNQLL---- 118
++ L N + QEF+LSP+ G+P SR RYF +AK +PL F Q+L L+
Sbjct: 122 DLFVQTLENCGFKYQEFLLSPISLGIPNSRLRYFLIAKLQSEPLPF--QVLGQVLVEIPT 179
Query: 119 -------RSPSPL-LGNDDMTVITKHDQPD---------DSWDKLLESCDPVERFLEFSN 161
+ P+ L LG ++ T+ + P +++ LE+ + +ER L+ +
Sbjct: 180 ADSANSQKQPATLDLGENNEGRKTEPNPPQAGDTQCSGKETFLFKLETAEEIERKLQ-QD 238
Query: 162 SGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPD 221
S V FL DD ++ +FL P +L+ R+ +DIV P
Sbjct: 239 SDLSVQMLKDFLE------DDSDMSQ------------YFLPPKALL-RYALLLDIVQPT 279
Query: 222 SKRCCCFTKSYYRYVKGTGSLLATVQP-------------KNKGKASSLKEQHLRYFTPR 268
+R CFTK Y Y++GTGS+L T + + K + L + LRYFTPR
Sbjct: 280 CRRSTCFTKGYGSYIEGTGSVLQTAEDIQIEDAYASLDTLSEEEKLTRLSQLKLRYFTPR 339
Query: 269 EVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFA 313
E+ANL FP +F+FP ++++Q Y LLGNSL++ +V+ L++ L
Sbjct: 340 EIANLLGFPPEFEFPEKITVKQCYRLLGNSLNVHIVSKLIRILLG 384
>gi|111185513|gb|AAH46854.2| MGC53207 protein [Xenopus laevis]
Length = 382
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/323 (37%), Positives = 168/323 (52%), Gaps = 36/323 (11%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
L+SPPCQP+TR GLQ SD RA SFL +L+++P K P + +ENV GFE+S+ +
Sbjct: 59 LMSPPCQPFTRIGLQGDISDPRAKSFLYVLDILPRLKKLPAYILLENVKGFESSEAREAL 118
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPS--PLL 125
I L Y+ QEF+LSP G+P SR RYF +AK + F + N L PS +
Sbjct: 119 IGTLQKCGYVYQEFLLSPTCLGIPNSRLRYFLIAKLQTEPFAFPISNTILEEFPSQHSID 178
Query: 126 GNDDMTVITKHDQPDDSWDKLLESC-------DPVERFLEFSNSGDQVNTETGFLSTGTA 178
+ + P D+ SC P + FL + ++ + G + +
Sbjct: 179 PGRRRVIHCSENNPQAGADQKNPSCPFSGTDHGPEKTFLYKLETAQELERKQGQDNDASV 238
Query: 179 -AVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVK 237
+ DF E +VE +FL P SL+ R+ +DIV P +R CFTK Y YV+
Sbjct: 239 RMLQDF--LETSVEEMS----QYFLPPKSLL-RYALILDIVRPTCRRSTCFTKGYGHYVE 291
Query: 238 GTGSLLATV----------------QPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQ 281
GTGS+L T + + K SSLK +RYFTPRE+ANLH FP F
Sbjct: 292 GTGSVLQTATDVEIDSVYNSLELLNEEEKLAKLSSLK---MRYFTPREIANLHGFPETFG 348
Query: 282 FPHHLSLRQRYALLGNSLSIAVV 304
FP ++ +QRY LLGNSL++ +V
Sbjct: 349 FPEEVTTKQRYRLLGNSLNVHIV 371
>gi|13096616|pdb|1G55|A Chain A, Structure Of Human Dnmt2, An Enigmatic Dna
Methyltransferase Homologue
Length = 343
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/320 (36%), Positives = 166/320 (51%), Gaps = 65/320 (20%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
L+SPPCQP+TR G Q +D+R SFL IL+++P K P + +ENV GFE S T +
Sbjct: 73 LMSPPCQPFTRIGRQGDMTDSRTNSFLHILDILPRLQKLPKYILLENVKGFEVSSTRDLL 132
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRCQLLNNQLLRSPSPLL 125
I+ + N + QEF+LSP G+P SR RYF +AK +PL F+ +P +L
Sbjct: 133 IQTIENXGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQ----------APGQVL 182
Query: 126 GNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGA 185
I + +Q D S ++ FLE DD
Sbjct: 183 MEFPKIEIHRKNQQDSDL-----SVKMLKDFLE----------------------DD--- 212
Query: 186 AEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLAT 245
++ +L+P + R+ +DIV P +R CFTK Y Y++GTGS+L T
Sbjct: 213 ----------TDVNQYLLPPKSLLRYALLLDIVQPTXRRSVCFTKGYGSYIEGTGSVLQT 262
Query: 246 ---VQPKNKGKAS---SLKEQ-------HLRYFTPREVANLHSFPGDFQFPHHLSLRQRY 292
VQ +N K+ S +EQ LRYFTP+E+ANL FP +F FP ++++QRY
Sbjct: 263 AEDVQVENIYKSLTNLSQEEQITKLLILKLRYFTPKEIANLLGFPPEFGFPEKITVKQRY 322
Query: 293 ALLGNSLSIAVVAPLLQYLF 312
LLGNSL++ VVA L++ L+
Sbjct: 323 RLLGNSLNVHVVAKLIKILY 342
>gi|307169339|gb|EFN62060.1| tRNA (cytosine-5-)-methyltransferase [Camponotus floridanus]
Length = 362
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 119/329 (36%), Positives = 171/329 (51%), Gaps = 56/329 (17%)
Query: 3 GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD 62
G A L+SPPCQP+TR GL+K + D RA S L IL LIP +K + +ENV GFE S+
Sbjct: 66 GLDAILMSPPCQPFTRLGLKKDALDNRACSLLHILNLIPE-LKSLRYILLENVKGFEVSE 124
Query: 63 THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF--RCQLLNNQLLRS 120
K + + + Y+ +E ILSP QFG+P SR RY+ LAKRK L F + LL N L
Sbjct: 125 MRDKFLNCIESCGYVYRELILSPCQFGIPNSRNRYYLLAKRKNLKFCFKQPLLKNSL--- 181
Query: 121 PSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAV 180
PS LL P S +L + ++NT++G + +
Sbjct: 182 PSALL-----------KLPPKSMHAIL------------AEKNGKINTKSGGM---CYTL 215
Query: 181 DDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTG 240
D+ E VE + +L+P L+++ +DI S CCFTK Y YV+GTG
Sbjct: 216 DNI---LENVEESK------YLLPSKLLQKRAQVLDIRTSKSNGSCCFTKGYGHYVEGTG 266
Query: 241 SLLA-----TVQPKNKGKASS----------LKEQHLRYFTPREVANLHSFPGDFQFPHH 285
S+ T++ K A+ L + LR+F+P+EV L FP DF FP H
Sbjct: 267 SVYCPFADETIKLKYSKAANEENNLDQQIQLLSDLKLRFFSPKEVCRLMCFPEDFNFPKH 326
Query: 286 LSLRQRYALLGNSLSIAVVAPLLQYLFAQ 314
++ +Q+Y LLGNS+++ VV+ L+ L+ +
Sbjct: 327 ITDKQKYRLLGNSINVHVVSRLIFLLYTE 355
>gi|89941477|ref|NP_001018153.1| tRNA (cytosine-5-)-methyltransferase [Danio rerio]
gi|62433271|dbj|BAD95483.1| DNA methyltransferase [Danio rerio]
Length = 381
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/327 (36%), Positives = 172/327 (52%), Gaps = 42/327 (12%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
L+SPPCQP+TR GLQ +D R SFL IL+L+P K P + +ENV GFE+S +
Sbjct: 77 LMSPPCQPFTRIGLQGDVADPRTKSFLYILDLLPRLSKRPRFILLENVKGFESSAARDAL 136
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGN 127
++ L DY QEF++SP G+P SR RYF +AKR P +F ++ +++
Sbjct: 137 LQTLRECDYSFQEFLISPTSLGIPNSRLRYFLIAKRAPETFSFP-VSTEIIEGFPMSEST 195
Query: 128 DDMTVITKHDQPDDSWDKL-------LESCDPVERFLEFSNSGDQVNTETGFLSTGTAAV 180
D ++V +D P S + LE+ + +ER + NS + V FL
Sbjct: 196 DGLSV--PYDHPTSSASEREKTIMFKLETEEDLERKRK-QNSQESVRRLLDFLQ------ 246
Query: 181 DDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTG 240
EE +E +L+P + R+ MDIV P S+R CFTK Y YV+GTG
Sbjct: 247 ----EEEEDME--------PYLLPPKTLLRYALVMDIVQPSSRRSVCFTKGYGHYVEGTG 294
Query: 241 SLLATV-------------QPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLS 287
S+L + Q + K L LRYFTPRE++ L FP F FP H+S
Sbjct: 295 SVLQSCMDVDLETVFKNLDQLSEEDKLKQLLRLKLRYFTPREISRLMGFPDHFTFPKHIS 354
Query: 288 LRQRYALLGNSLSIAVVAPLLQYLFAQ 314
+Q+Y +LGNSL++ VV+ L++ + ++
Sbjct: 355 FKQQYRVLGNSLNVHVVSHLIRLMLSK 381
>gi|345487046|ref|XP_001602026.2| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase-like, partial
[Nasonia vitripennis]
Length = 347
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/321 (36%), Positives = 172/321 (53%), Gaps = 53/321 (16%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
L+SPPCQP+TR GL+K S D R S L IL++IPH ++ + +ENV GFE+S ++
Sbjct: 56 LMSPPCQPFTRIGLKKDSDDNRCLSLLHILQIIPH-IESLDYILLENVKGFESSQARNEV 114
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGN 127
I L S + +E ILSP QFG+P SR RY+ +AKRK L F
Sbjct: 115 ILCLEKSGFNYKELILSPCQFGIPNSRHRYYLIAKRKGLKFIF----------------- 157
Query: 128 DDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGT-AAVDDFGAA 186
DD ++IT P+ + L P R+ L GT +++ G
Sbjct: 158 DDASLIT--SIPEKVLELL-----PKNRYTSVP------------LEDGTHSSIKSKGKC 198
Query: 187 EETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLA-- 244
+ + +++FL+P ++ + GS +DI P+S CCFTK+Y YV+GTGS+ +
Sbjct: 199 FKLKYILESNVVENFLIPGKILLKRGSLLDIRTPESSGSCCFTKAYSHYVEGTGSVFSPS 258
Query: 245 ---TVQPK----NKG------KASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQR 291
++ K NK K +L LRYFTP+EV+ L FP +F+FP+ LS +Q+
Sbjct: 259 PDFEIKKKFEEINKSSETPEDKMQALLGLKLRYFTPKEVSRLMCFPENFEFPNDLSNKQK 318
Query: 292 YALLGNSLSIAVVAPLLQYLF 312
Y LLGNS+++ VV+ L+ L+
Sbjct: 319 YRLLGNSINVHVVSQLIYLLY 339
>gi|348553999|ref|XP_003462813.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase-like [Cavia
porcellus]
Length = 391
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 118/332 (35%), Positives = 176/332 (53%), Gaps = 38/332 (11%)
Query: 5 HAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTH 64
+ L+SPPCQP+TR GLQ +D R SFL +L+++P K P + +ENV GFE S T
Sbjct: 71 NMILMSPPCQPFTRIGLQGDMTDRRTNSFLHVLDILPRLQKLPRYILLENVKGFEVSSTR 130
Query: 65 AKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRCQ---LLNNQLLR 119
+IE + N + QEF+LSP G+P SR RYF +AK +PL F+ L++ +
Sbjct: 131 DLLIETIENCGFRYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPGQVLMDFPKIE 190
Query: 120 S--PSPLLGNDDMTVITKHDQPDDSWDKLLESC--DPVERFLEFSNSGDQVNTETGFLST 175
S P + + K +P+ +D+ + D + LE + D+ + + L+
Sbjct: 191 SEHPQKYAIDAENRNNVKKIEPNTCFDRNPQCSGKDTILFKLETAEEIDRKHQQNNDLT- 249
Query: 176 GTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRY 235
+ DF E V ++ +++P + R+ +DIV P +R CFTK Y Y
Sbjct: 250 -VQMLKDFLEDE--------VDMNLYILPPKSLLRYALLLDIVKPTCRRSTCFTKGYGSY 300
Query: 236 VKGTGSLLATV----------------QPKNKGKASSLKEQHLRYFTPREVANLHSFPGD 279
V+GTGS+L T Q + K S LK LRYFTP+E+ANL FP +
Sbjct: 301 VEGTGSVLQTAEDVQIEAIYKSLTNLPQEEQIAKLSMLK---LRYFTPKEIANLLGFPPE 357
Query: 280 FQFPHHLSLRQRYALLGNSLSIAVVAPLLQYL 311
F FP ++++Q Y LLGNSL++ VVA L++ L
Sbjct: 358 FGFPKKITMKQCYRLLGNSLNVHVVAKLIKIL 389
>gi|354482485|ref|XP_003503428.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase-like
[Cricetulus griseus]
gi|344245952|gb|EGW02056.1| tRNA (cytosine-5-)-methyltransferase [Cricetulus griseus]
Length = 391
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 123/331 (37%), Positives = 178/331 (53%), Gaps = 36/331 (10%)
Query: 5 HAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTH 64
+ L+SPPCQP+TR GLQ +D R SFL IL+++P K P + +ENV GFE S T
Sbjct: 71 NMILMSPPCQPFTRIGLQGDMTDPRTNSFLYILDILPRLQKLPKYILLENVKGFEVSSTR 130
Query: 65 AKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRC--QLLNN----Q 116
+I+ + + QEF+LSP G+P SR RYF +AK +PL F+ Q+L
Sbjct: 131 GLLIQTIEACGFQHQEFLLSPSSLGIPNSRLRYFLIAKLQSEPLPFQAPDQILMEFPKIA 190
Query: 117 LLRSPSPLLGNDDMTVITKHDQPD---DSWDKLLESCDPVERFLEFSNSGDQVNTETGFL 173
+++ S + ++ T+ K +P DS D + LE + D+ + + L
Sbjct: 191 TIQTQSYAVVAEN-TLRVKRPEPSTCFDSSSTQYSRKDSILFKLETAEEIDRKHQQDNDL 249
Query: 174 STGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYY 233
S + DF E+T + +P L+ R+ +DIV P S+R CFTK Y
Sbjct: 250 S--VQMLKDFLEDEDT---------SQYFLPPKLLLRYALLLDIVKPTSRRSMCFTKGYG 298
Query: 234 RYVKGTGSLLAT---VQPKN----------KGKASSLKEQHLRYFTPREVANLHSFPGDF 280
Y++GTGS+L T VQ +N + K + L LRYFTPRE+ANL FP +F
Sbjct: 299 SYIEGTGSVLQTAEDVQIENVFKSLNDLPPEEKIAKLSTLKLRYFTPREIANLQGFPPEF 358
Query: 281 QFPHHLSLRQRYALLGNSLSIAVVAPLLQYL 311
FP ++++QRY LLGNSL++ VVA L+ L
Sbjct: 359 GFPEKITVKQRYRLLGNSLNVHVVAKLITIL 389
>gi|432099759|gb|ELK28794.1| tRNA (cytosine(38)-C(5))-methyltransferase [Myotis davidii]
Length = 502
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 119/338 (35%), Positives = 180/338 (53%), Gaps = 42/338 (12%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
L+SPPCQP+TR GLQ +D R SFL IL+++P P + +ENV GFE S +
Sbjct: 175 LMSPPCQPFTRIGLQGDVTDPRTNSFLYILDILPRLQTLPKYILLENVKGFEVSSARDLL 234
Query: 68 IEILANSDYLTQEFILSP----------LQFGVPYSRPRYFCLAK--RKPLSFRCQ---L 112
I+ + N + QEF+LSP Q G+P SR RYF +AK +PL F+ L
Sbjct: 235 IKTIENCGFQYQEFLLSPTSVVDRDLFYFQLGIPNSRLRYFLIAKLQSEPLPFQAPGQVL 294
Query: 113 LNNQLLRSPSPLLGNDDMT--VITKHDQPDDSWD--KLLESCDPVERFLEFSNSGDQVNT 168
+ + S P D + K +P+ +D + +P+ LE + ++ +
Sbjct: 295 MEFPKMESEHPQQHAIDAVNKIEGKKIEPNICFDSSRQCSGKEPILFKLETAEEIERKHQ 354
Query: 169 ETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCF 228
+ LS + DF E+ ++ ++ +FL P SL+ R+ +DIV P +R CF
Sbjct: 355 QDSDLS--VQMLKDF--LEDDIDTNQ-----YFLPPKSLL-RYALLLDIVTPTCRRSMCF 404
Query: 229 TKSYYRYVKGTGSLLATVQP-------------KNKGKASSLKEQHLRYFTPREVANLHS 275
TK Y RY++GTGS+L T + + K + L LRYFTP+E+ANL
Sbjct: 405 TKGYGRYIEGTGSVLQTAEDVQIEDIYKSLTDLSQEEKITKLLMLKLRYFTPKEIANLLG 464
Query: 276 FPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFA 313
FP +F FP +++++QRY LLGNSL++ VVA L++ L+
Sbjct: 465 FPPEFGFPENITVKQRYRLLGNSLNVHVVAKLIKVLYG 502
>gi|340381658|ref|XP_003389338.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase-like
[Amphimedon queenslandica]
Length = 373
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/325 (35%), Positives = 158/325 (48%), Gaps = 63/325 (19%)
Query: 4 AHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDT 63
A+ + LSPPCQP+TRQG + D R SF ++ ++ KPP + +ENV GFE S T
Sbjct: 98 ANLFTLSPPCQPFTRQGKNEDDIDYRTDSFFHLMGILSAMQKPPQYIMMENVKGFELSRT 157
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSP 123
+ +L Y QE+++SP QFG+P SR RY+ LA+ P +F+ +P
Sbjct: 158 RGHFVHVLKELGYTFQEYLISPKQFGIPNSRLRYYLLARLSPRNFKA-----------AP 206
Query: 124 LLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDF 183
L D K+ P D L+ CD ++ +DD
Sbjct: 207 L---QDTVEHLKYYIPTSFHDIHLK-CDI------------------------SSYLDDL 238
Query: 184 GAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLL 243
E+D + FLVP ++E++ +DIV S CCFT+ YY Y GTGS+L
Sbjct: 239 S------EID----VQQFLVPDRILEKYAQGLDIVSAKSHSSCCFTRGYYHYAVGTGSVL 288
Query: 244 A--------------TVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLR 289
Q N SLKE LRYFTP+EVA L SFP FP +S +
Sbjct: 289 HHDCSVDLALAYQCYAEQKNNCDGIKSLKELKLRYFTPQEVAKLMSFPASHTFPTSVSNK 348
Query: 290 QRYALLGNSLSIAVVAPLLQYLFAQ 314
Q Y LLGNS+++ VVA LL YL +Q
Sbjct: 349 QCYKLLGNSVNVFVVATLLCYLCSQ 373
>gi|26341152|dbj|BAC34238.1| unnamed protein product [Mus musculus]
Length = 415
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/342 (35%), Positives = 172/342 (50%), Gaps = 58/342 (16%)
Query: 5 HAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTH 64
+ L+SPPCQP+TR GLQ +D R SFL IL+++P K P + +ENV GFE S T
Sbjct: 71 NMILMSPPCQPFTRIGLQGDMTDPRTTSFLYILDILPRLQKLPKYILLENVKGFEVSSTR 130
Query: 65 AKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPL 124
+I+ + + QEF+LSP G+P SR RYF +AK + F Q L+ P +
Sbjct: 131 GLLIQTIEACGFQYQEFLLSPSSLGIPNSRLRYFLIAKLQSEPFPFQAPGQILMEFPKIV 190
Query: 125 LGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFG 184
+ + QP V+R +G ++ E+ ST ++ D
Sbjct: 191 TVEPQKYAVVEESQPR------------VQR------TGPRICAESS--STQSSGKDTIL 230
Query: 185 AAEETVE-------VDRCVSI------------DHFLVPLSLIERWGSAMDIVYPDSKRC 225
ETVE D +S+ D +L+P L+ R+ +DIV P S+R
Sbjct: 231 FKLETVEERDRKHQQDSDLSVQMLKDFLEDGDTDEYLLPPKLLLRYALLLDIVKPTSRRS 290
Query: 226 CCFTKSYYRYVKGTGSLLATVQ---------------PKNK-GKASSLKEQHLRYFTPRE 269
CFTK Y Y++GTGS+L + P+ K K S LK LRYFTP+E
Sbjct: 291 MCFTKGYGSYIEGTGSVLQATEDAQIENIYKSLPDLPPEEKIAKLSMLK---LRYFTPKE 347
Query: 270 VANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYL 311
+ANL FP +F FP +++QRY LLGNSL++ VVA LL L
Sbjct: 348 IANLQGFPPEFGFPEKTTVKQRYRLLGNSLNVHVVAKLLTVL 389
>gi|161016803|ref|NP_034197.3| tRNA (cytosine(38)-C(5))-methyltransferase [Mus musculus]
gi|20141317|sp|O55055.2|TRDMT_MOUSE RecName: Full=tRNA (cytosine(38)-C(5))-methyltransferase; AltName:
Full=DNA (cytosine-5)-methyltransferase-like protein 2;
Short=Dnmt2; AltName: Full=DNA methyltransferase homolog
MmuIIP; Short=DNA MTase homolog MmuIIP; Short=M.MmuIIP;
AltName: Full=Met-2
gi|2627433|gb|AAC53529.1| putative DNA methyltransferase [Mus musculus]
gi|56971714|gb|AAH87892.1| TRNA aspartic acid methyltransferase 1 [Mus musculus]
gi|148676105|gb|EDL08052.1| DNA methyltransferase 2 [Mus musculus]
Length = 415
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/342 (35%), Positives = 172/342 (50%), Gaps = 58/342 (16%)
Query: 5 HAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTH 64
+ L+SPPCQP+TR GLQ +D R SFL IL+++P K P + +ENV GFE S T
Sbjct: 71 NMILMSPPCQPFTRIGLQGDMTDPRTTSFLYILDILPRLQKLPKYILLENVKGFEVSSTR 130
Query: 65 AKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPL 124
+I+ + + QEF+LSP G+P SR RYF +AK + F Q L+ P +
Sbjct: 131 GLLIQTIEACGFQYQEFLLSPSSLGIPNSRLRYFLIAKLQSEPFPFQAPGQILMEFPKIV 190
Query: 125 LGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFG 184
+ + QP V+R +G ++ E+ ST ++ D
Sbjct: 191 TVEPQKYAVVEESQPR------------VQR------TGPRICAESS--STQSSGKDTIL 230
Query: 185 AAEETVE-------VDRCVSI------------DHFLVPLSLIERWGSAMDIVYPDSKRC 225
ETVE D +S+ D +L+P L+ R+ +DIV P S+R
Sbjct: 231 FKLETVEERDRKHQQDSDLSVQMLKDFLEDGDTDEYLLPPKLLLRYALLLDIVKPTSRRS 290
Query: 226 CCFTKSYYRYVKGTGSLLATVQ---------------PKNK-GKASSLKEQHLRYFTPRE 269
CFTK Y Y++GTGS+L + P+ K K S LK LRYFTP+E
Sbjct: 291 MCFTKGYGSYIEGTGSVLQAAEDAQIENIYKSLPDLPPEEKIAKLSMLK---LRYFTPKE 347
Query: 270 VANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYL 311
+ANL FP +F FP +++QRY LLGNSL++ VVA LL L
Sbjct: 348 IANLQGFPPEFGFPEKTTVKQRYRLLGNSLNVHVVAKLLTVL 389
>gi|449275603|gb|EMC84405.1| tRNA (cytosine-5-)-methyltransferase, partial [Columba livia]
Length = 376
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/335 (37%), Positives = 166/335 (49%), Gaps = 40/335 (11%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
L+SPPCQP+TR GLQ SD R SFL IL+++P K P L +ENV GFE S ++
Sbjct: 53 LMSPPCQPFTRIGLQGDVSDPRTKSFLYILDILPRLQKLPKYLLLENVKGFECSSARNEL 112
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLL-- 125
+ L + QEF+LSP G+P SR RYF +AK F Q L R P L
Sbjct: 113 LRTLETCGFKYQEFLLSPTCLGIPNSRLRYFLIAKLHQEPFPFQAPGQILPRFPDQDLED 172
Query: 126 -------GNDDMTVITKHDQ------PDDSWDKLLESCDPVERFL-EFSNSGDQVNTETG 171
G D ++ ++ PD S K L P FL + + T
Sbjct: 173 LFENKAAGKDSSSLSSEEKNLDPNIGPDCSSKKSL----PKGTFLFKLETVEEMERKHTQ 228
Query: 172 FLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKS 231
+ + DF EE E+ + +FL P SL+ R+ +DIV P +R CFTK
Sbjct: 229 DNDSSIQMLKDF-LEEENEEMSQ-----YFLPPKSLL-RYAFLLDIVKPTCRRSTCFTKG 281
Query: 232 YYRYVKGTGSLLATV-------------QPKNKGKASSLKEQHLRYFTPREVANLHSFPG 278
Y YV+GTGS+L T + + K L LRYFTPRE+ANLH FP
Sbjct: 282 YGHYVEGTGSVLQTAVDVQLESVFKCIEELPEEEKLMKLSTLKLRYFTPREIANLHGFPL 341
Query: 279 DFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFA 313
+F FP ++++Q Y LLGNSL++ VVA L+ L
Sbjct: 342 EFGFPDKVTIKQCYRLLGNSLNVHVVAKLISILLG 376
>gi|327274474|ref|XP_003222002.1| PREDICTED: LOW QUALITY PROTEIN: tRNA
(cytosine-5-)-methyltransferase-like [Anolis
carolinensis]
Length = 391
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/346 (35%), Positives = 173/346 (50%), Gaps = 64/346 (18%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
L+SPPCQP+TR G Q+ SD R SFL IL+++P K P L +ENV GFETS ++
Sbjct: 70 LMSPPCQPFTRIGQQRDVSDPRTRSFLYILDILPRLAKLPKYLLLENVKGFETSSARDEL 129
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRCQLLNNQLLRSPSPLL 125
I L ++ QEF+LSP G+P +R RYF +A+ +P F P +L
Sbjct: 130 IRTLEKCGFIYQEFLLSPTCLGIPNARLRYFLIARLQTEPFPFHV----------PGKIL 179
Query: 126 GNDDMTVITKHDQPDDSWDK----LLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVD 181
T DQ D + L+E+ P+ S S D + G ++
Sbjct: 180 -----TDFPNQDQVDSERSRCSTGLMEAGSPLPTRETVSGSDD---------NDGHSSKR 225
Query: 182 DFGAAEETVE-VDRCVSIDH--------------------FLVPLSLIERWGSAMDIVYP 220
DF ET E ++R D+ +L+P + R+ +DIV P
Sbjct: 226 DFLFKLETEEELERKQQQDNDPSLQMLRNFLQGDGEDLSQYLLPPKSLLRYALLLDIVTP 285
Query: 221 DSKRCCCFTKSYYRYVKGTGSLLAT---VQPKNKGKA-SSLKEQHL---------RYFTP 267
+R CFTK Y Y++GTGS+L T +Q ++ K+ SL E+ RYFTP
Sbjct: 286 SCRRSTCFTKGYGHYIEGTGSVLQTEEDIQLESVFKSFESLSEEEKLMKLSLLKLRYFTP 345
Query: 268 REVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFA 313
RE+ANLH FP +F FP ++ +Q+Y LLGNSL+I VVA L+ L
Sbjct: 346 REIANLHGFPPEFGFPDKVTTKQQYRLLGNSLNIQVVAKLISLLVG 391
>gi|348536610|ref|XP_003455789.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase-like
[Oreochromis niloticus]
Length = 382
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/335 (37%), Positives = 170/335 (50%), Gaps = 55/335 (16%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
L+SPPCQP+TR GLQ +D R SFL IL+L+P + P + +ENV GFETS A++
Sbjct: 74 LMSPPCQPFTRIGLQGDVTDPRTKSFLYILDLLPRLQRLPRFILLENVKGFETSSARARL 133
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPS----- 122
++ L Y QE ++SP+ G+P SR RYF +AK + LN Q +PS
Sbjct: 134 VKTLTECGYTFQEIMISPISVGIPNSRLRYFLIAK-----ISTEDLNTQ---APSKILDF 185
Query: 123 -PLLGNDDMT--------VITKHDQPDDSWDKL--LESCDPVERFLEFSNSGDQVNTETG 171
P L D + QP++ D L LE+ +R + NS V
Sbjct: 186 FPHLAESDSSEHPTFLSPACQGASQPEEGTDVLFKLETTAEAQRKIR-QNSNLSVKQIKE 244
Query: 172 FLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKS 231
FL E +EV+ ++ +L+P + R+G +DIV P +R CFTK
Sbjct: 245 FL-------------EPQMEVN----MEPYLLPPKTLLRYGLVLDIVQPTCRRSVCFTKG 287
Query: 232 YYRYVKGTGSLLATV-------------QPKNKGKASSLKEQHLRYFTPREVANLHSFPG 278
Y RYV+GTGS+L Q + K L + LRYF+PREVANL FP
Sbjct: 288 YGRYVQGTGSVLQCCMETKIESVFMGLDQCSEEEKLQRLLKLKLRYFSPREVANLMGFPQ 347
Query: 279 DFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFA 313
+ FP + Q+Y LLGNSL++ VVA LLQ L +
Sbjct: 348 NLIFPEKIPTIQQYRLLGNSLNVVVVAKLLQLLVS 382
>gi|351705087|gb|EHB08006.1| tRNA (cytosine-5-)-methyltransferase [Heterocephalus glaber]
Length = 400
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 127/342 (37%), Positives = 183/342 (53%), Gaps = 47/342 (13%)
Query: 5 HAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTH 64
+ L+SPPCQP+TR GLQ +D R SFL IL+++P K P + +ENV GFE S T
Sbjct: 71 NMILMSPPCQPFTRIGLQGDMTDRRTNSFLHILDILPRLQKLPKYILLENVKGFEVSSTR 130
Query: 65 AKMIEILANSDYLTQEFILS--------PLQF-GVPYSRPRYFCLAK--RKPLSFRCQ-- 111
+IE + N + QEF+LS PLQ G+P SR RYF +AK +PL F+
Sbjct: 131 DLLIETIENCGFQYQEFLLSPPSVAALLPLQLNGIPNSRLRYFLIAKLQSEPLPFQAPGQ 190
Query: 112 -LLNNQLLRSPSPLLGNDDMTVIT--KHDQPDDSWDKLLESC--DPVERFLEFSNSGDQV 166
L++ + S P D+ + K +P +DK + D + LE + D+
Sbjct: 191 VLMDFPKIESEHPQKHAVDVENRSNIKKIEPITHFDKSPQCSGKDTILFKLETAEEIDRK 250
Query: 167 NTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCC 226
+ + +S + DF E+ +E D+ +FL P SL+ R+ +DIV P +R
Sbjct: 251 HQQDSDVS--VQMLKDF--LEDDIETDQ-----YFLPPKSLL-RYALLLDIVKPTCRRSV 300
Query: 227 CFTKSYYRYVKGTGSLLATV----------------QPKNKGKASSLKEQHLRYFTPREV 270
CFTK Y Y++GTGS+L T Q + K S LK LRYFTP+E+
Sbjct: 301 CFTKGYGSYIEGTGSVLQTAEDVQIETVYKSLNNLPQEEQITKLSVLK---LRYFTPKEI 357
Query: 271 ANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 312
ANL FP +F FP ++++Q Y LLGNSL++ VVA L++ L+
Sbjct: 358 ANLLGFPPEFGFPKKITMKQCYRLLGNSLNVHVVAKLIKILY 399
>gi|241832196|ref|XP_002414890.1| DNA (cytosine-5)-methyltransferase, putative [Ixodes scapularis]
gi|215509102|gb|EEC18555.1| DNA (cytosine-5)-methyltransferase, putative [Ixodes scapularis]
Length = 361
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 116/328 (35%), Positives = 158/328 (48%), Gaps = 75/328 (22%)
Query: 9 LSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMI 68
+SPPCQP+TRQGLQ S D R+ SFL +L ++P PP + +ENV GFETS T +
Sbjct: 88 MSPPCQPFTRQGLQLDSQDPRSASFLSLLRVLPTLKHPPTYILLENVKGFETSSTCDAFL 147
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR-----CQLLNNQLLRSPSP 123
++L + Y ++L+P QFGVP SR R++CLAK PL F C NQ P P
Sbjct: 148 DVLRDGGYHAHRYLLTPTQFGVPNSRLRFYCLAKLNPLRFSDCPTACDAECNQ---EPPP 204
Query: 124 LLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDF 183
+T+ D+P + +D FLE ++
Sbjct: 205 --------NVTRCDRPRELYD-----------FLEQTDED-------------------- 225
Query: 184 GAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLL 243
S +L+P ++ R+ +DI S CCFTK Y YV+GTGS+L
Sbjct: 226 -------------SCSDYLLPDRVLSRFAYILDIADATSTNTCCFTKGYGHYVEGTGSVL 272
Query: 244 AT------------VQPKNKGK---ASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSL 288
VQP+ + L+ LRYFTP EVA L FP DF+FP L
Sbjct: 273 LQASRDLMHEVYRHVQPRTAVQDDVLELLRTLRLRYFTPVEVARLMCFPDDFRFPPELKA 332
Query: 289 RQRYALLGNSLSIAVVAPLLQYLFAQAG 316
R RY LLGNS+++ VV L+++L G
Sbjct: 333 RHRYQLLGNSVNVCVVGSLVRHLLDDVG 360
>gi|330802352|ref|XP_003289182.1| hypothetical protein DICPUDRAFT_153508 [Dictyostelium purpureum]
gi|325080758|gb|EGC34300.1| hypothetical protein DICPUDRAFT_153508 [Dictyostelium purpureum]
Length = 378
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 168/318 (52%), Gaps = 25/318 (7%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
+ ++AWL+SPPCQP+TR GLQK D R SF +L++I PP + +ENV GFE S
Sbjct: 81 FKSNAWLMSPPCQPFTRSGLQKDDLDNRTNSFFHLLDVIGKLKSPPKYILIENVFGFEKS 140
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSP 121
+T +++++L Y QEF L+P QF +P R RYFC+AK + F Q +
Sbjct: 141 NTRTELVKVLKQLHYSFQEFHLTPQQFDLPNQRLRYFCIAKLNSI-FNFQEI-------- 191
Query: 122 SPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVD 181
+ T+I K D+ ++ + + + ++ +N G+ + +
Sbjct: 192 -------EETIIDKKDENVNNINNENNENNNNNDNNDNNDKYKILNYIPGYNHSTLEDCE 244
Query: 182 DFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGS 241
+T + D + H VP L+ G DI +SK C CFTKSY ++V+GTGS
Sbjct: 245 PLSNYLDTDKTDDEIYQQH-KVPEKLLLSKGMLFDIKQKESKTCNCFTKSYGKFVEGTGS 303
Query: 242 LLATVQPKNKGKA-----SSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLG 296
+ +Q N+ KA SL LRYFTP+E+ LH FP +F+F L Q Y L+G
Sbjct: 304 I---IQIDNEFKADETNPKSLIPMKLRYFTPKEITRLHGFPEEFKFSPQLKTIQCYRLIG 360
Query: 297 NSLSIAVVAPLLQYLFAQ 314
NSL++ +++ L++ L ++
Sbjct: 361 NSLNVKIISELVKLLVSK 378
>gi|443726123|gb|ELU13416.1| hypothetical protein CAPTEDRAFT_108989 [Capitella teleta]
Length = 360
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 107/326 (32%), Positives = 162/326 (49%), Gaps = 62/326 (19%)
Query: 9 LSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMI 68
+SPPCQP+TR G Q+ D R SFL +L++I + +FVENV GF+ S+ H ++
Sbjct: 76 MSPPCQPFTRVGKQRDIDDPRTKSFLHLLKVISTLERSVKYIFVENVKGFDGSEAHRMLL 135
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGND 128
E L +DY+ QEF++SPLQ G+P SR RY+ +AK+KPL F+ + + P+
Sbjct: 136 ETLQAADYVMQEFLISPLQCGIPNSRLRYYLMAKKKPLKFQFDTTSQIMTELPACAASYL 195
Query: 129 DMTVITKHDQPDDS-------WDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVD 181
+ +PD + +D+ C P+ +L+ S D
Sbjct: 196 NHC----QSKPDSTASSSVPLYDRCAAMCRPLSSYLQEDMSHD----------------- 234
Query: 182 DFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGS 241
L+P + R+ MDIV P S CCFTK Y +++G GS
Sbjct: 235 --------------------LLPEKFVHRFW-VMDIVKPSSTNSCCFTKRYGHHIEGAGS 273
Query: 242 LLAT-------VQPKNKGKA------SSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSL 288
+L T + K K +++K+ LR+F+PRE+ANL FP F FP + S
Sbjct: 274 VLQTNTDCEIDLTEYKKTKVYTAETEAAVKQLGLRFFSPREIANLMHFPAHFSFPANFST 333
Query: 289 RQRYALLGNSLSIAVVAPLLQYLFAQ 314
Q Y +LGNSL++ VVA L++ + +
Sbjct: 334 VQTYRVLGNSLNVHVVAVLMKLMLIE 359
>gi|2895947|gb|AAC40130.1| putative DNA cytosine methyltransferase DNMT2 [Mus musculus]
Length = 415
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 122/342 (35%), Positives = 171/342 (50%), Gaps = 58/342 (16%)
Query: 5 HAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTH 64
+ L+SPPCQP+TR GLQ +D R SFL IL+++P K P + +ENV GFE S T
Sbjct: 71 NMILMSPPCQPFTRIGLQGDMTDPRTTSFLYILDILPRLQKLPKYILLENVKGFEVSSTR 130
Query: 65 AKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPL 124
+I+ + + QEF+LSP G+P SR RY +AK + F Q L+ P +
Sbjct: 131 GLLIQTIEACGFQYQEFLLSPSSLGIPNSRLRYSLIAKLQSEPFPFQAPGQILMEFPKIV 190
Query: 125 LGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFG 184
+ + QP V+R +G ++ E+ ST ++ D
Sbjct: 191 TVEPQKYAVVEESQPR------------VQR------TGPRICAESS--STQSSGKDTIL 230
Query: 185 AAEETVE-------VDRCVSI------------DHFLVPLSLIERWGSAMDIVYPDSKRC 225
ETVE D +S+ D +L+P L+ R+ +DIV P S+R
Sbjct: 231 FKLETVEERDRKHQQDSDLSVQMLKDFLEDGDTDEYLLPPKLLLRYALLLDIVKPTSRRS 290
Query: 226 CCFTKSYYRYVKGTGSLLATVQ---------------PKNK-GKASSLKEQHLRYFTPRE 269
CFTK Y Y++GTGS+L + P+ K K S LK LRYFTP+E
Sbjct: 291 MCFTKGYGSYIEGTGSVLQAAEDAQIENIYKSLPDLPPEEKIAKLSMLK---LRYFTPKE 347
Query: 270 VANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYL 311
+ANL FP +F FP +++QRY LLGNSL++ VVA LL L
Sbjct: 348 IANLQGFPPEFGFPEKTTVKQRYRLLGNSLNVHVVAKLLTVL 389
>gi|26325124|dbj|BAC26316.1| unnamed protein product [Mus musculus]
Length = 415
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 122/339 (35%), Positives = 170/339 (50%), Gaps = 58/339 (17%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
L+SPPCQP+TR GLQ +D R SFL IL+++P K P + +ENV GFE S T +
Sbjct: 74 LMSPPCQPFTRIGLQGDMTDPRTTSFLYILDILPRLQKLPKYILLENVKGFEVSSTRGLL 133
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGN 127
I+ + + QEF+LSP G+P SR RYF +AK + F Q L+ P +
Sbjct: 134 IQTIEACGFQYQEFLLSPSSLGIPNSRLRYFLIAKLQSEPFPFQAPGQILMEFPKIVTVE 193
Query: 128 DDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAE 187
+ + QP V+R +G ++ E+ ST ++ D
Sbjct: 194 PQKYAVVEESQPR------------VQR------TGPRICAESS--STQSSGKDTILFKL 233
Query: 188 ETVE-------VDRCVSI------------DHFLVPLSLIERWGSAMDIVYPDSKRCCCF 228
ETVE D +S+ D +L+P L+ R+ +DIV S+R CF
Sbjct: 234 ETVEERDRKHQQDSDLSVQMLKDFLEDGDTDEYLLPPKLLLRYALLLDIVKHTSRRSMCF 293
Query: 229 TKSYYRYVKGTGSLLATVQ---------------PKNK-GKASSLKEQHLRYFTPREVAN 272
TK Y Y++GTGS+L + P+ K K S LK LRYFTP+E+AN
Sbjct: 294 TKGYGSYIEGTGSVLQAAEDAQIENIYKSLPDLPPEEKIAKLSMLK---LRYFTPKEIAN 350
Query: 273 LHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYL 311
L FP +F FP +++QRY LLGNSL++ VVA LL L
Sbjct: 351 LQGFPPEFGFPEKTTVKQRYRLLGNSLNVHVVAKLLTVL 389
>gi|449662352|ref|XP_002166687.2| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase-like [Hydra
magnipapillata]
Length = 388
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 104/329 (31%), Positives = 171/329 (51%), Gaps = 28/329 (8%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
+ A W +SPPCQPYTR G Q+ S D RA SF K++ ++ PP +F+ENV GFE S
Sbjct: 69 FNADVWTMSPPCQPYTRLGKQEASCDPRAKSFKKLMNILMKMTSPPSFIFLENVKGFEVS 128
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK-RKPLSFRCQLLNNQLLRS 120
D+ + IL + Y TQ F+LSP+ FG+P SR RY+ +A+ +K +F+ +
Sbjct: 129 DSCEDFLMILNSKGYYTQSFLLSPIDFGIPNSRLRYYLIARYQKKFNFK---------TT 179
Query: 121 PSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAV 180
P+ N ++ D + L S + + ++ + + N+ + +++ +
Sbjct: 180 QKPICLNGNLCECEGLDM--ECACTALASVVQLYKPMKIKDILNVDNSVSSEINSSSFCE 237
Query: 181 DDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTG 240
D + ++ R I + S++ R+ S DIV DS + CCFT Y R+++GTG
Sbjct: 238 PDLKKMLDLLQ-KRSFPIKFTKISHSILLRYYSLFDIVDSDSNKSCCFTSGYSRFIEGTG 296
Query: 241 SL---------------LATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHH 285
SL L+ + N+ L+ LR+F+P E+A L FP F FP
Sbjct: 297 SLFSCLPQSDRNLILNKLSITENDNESNIDLLESLQLRFFSPEEIAALLCFPICFSFPDK 356
Query: 286 LSLRQRYALLGNSLSIAVVAPLLQYLFAQ 314
++ +Q+Y LLGNS+++ VVA +++Y +
Sbjct: 357 ITEKQKYKLLGNSVNVLVVANVMRYFLFE 385
>gi|344277973|ref|XP_003410771.1| PREDICTED: LOW QUALITY PROTEIN: tRNA
(cytosine(38)-C(5))-methyltransferase-like [Loxodonta
africana]
Length = 441
Score = 170 bits (430), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 119/333 (35%), Positives = 180/333 (54%), Gaps = 38/333 (11%)
Query: 5 HAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTH 64
+ L+SPPCQP+TR GLQ +D R SFL IL+++P K P + +ENV GFE S T
Sbjct: 122 NMILMSPPCQPFTRIGLQGDKADPRTSSFLYILDILPRLKKLPKYILLENVKGFEVSSTR 181
Query: 65 AKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPL 124
+I+ + N + QEF+LSP G Y R R+ L+K S LL P
Sbjct: 182 DMLIQTIENCGFQHQEFLLSPNSVGTIYLRFRHRLLSKESFDSLYIFTXFQILLEFPK-- 239
Query: 125 LGNDD---------MTVITKHDQPDDSWDKLLESCDPVERFL---EFSNSGDQVNTETGF 172
+G+++ K +P+ D + C E L E + D+ + +
Sbjct: 240 IGSENPQKHAIDAEKKTEEKKIEPNICLDGSTQ-CSGKETILFKLETAKEIDRKHQQNSD 298
Query: 173 LSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSY 232
LS + DF E +++++ +FL P L++R+ +DIV P +R CFTK Y
Sbjct: 299 LSV--QMLKDF--LEHDIDINQ-----YFLSP-KLLQRYAFILDIVKPTCRRSTCFTKGY 348
Query: 233 YRYVKGTGSLLAT---VQPKNKGKA-SSLKEQH---------LRYFTPREVANLHSFPGD 279
R+++GTGS+L T VQ ++ K+ S+L E+ LRYFTP+E+ANL FP +
Sbjct: 349 GRFIEGTGSVLQTAEDVQIESIYKSLSNLSEEEKITKLLMLKLRYFTPKEIANLLGFPPE 408
Query: 280 FQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 312
F FP +++++QRY LLGNSL++ +VA L++ LF
Sbjct: 409 FGFPENVTVKQRYCLLGNSLNVHIVAKLIKILF 441
>gi|281212492|gb|EFA86652.1| DNA cytosine-5--methyltransferase [Polysphondylium pallidum PN500]
Length = 420
Score = 170 bits (430), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 102/318 (32%), Positives = 163/318 (51%), Gaps = 46/318 (14%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
+ A+ WL+SPPCQP+TR GLQK D R SF+ +LE + +PP + +ENV GFE S
Sbjct: 108 FRANTWLMSPPCQPFTRVGLQKDLQDNRTNSFVHLLEQLAALAEPPTYILIENVYGFEKS 167
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSP 121
+ ++E Y QEF L+P QFG+P R RYFC+AK+ L+ +N +
Sbjct: 168 NARDLLLETFNQLQYQFQEFHLTPTQFGLPNQRLRYFCIAKKVLLNNDSNNNSNSNIDIK 227
Query: 122 SPLLGNDDMTVIT-----KHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTG 176
+ ++ D+ ++ +H + +++ + +E++L+ + NT+ +
Sbjct: 228 TKIVTKDNAIILKTIPSYQHTENNET--------NTIEQYLD-----ESYNTDEHYYK-- 272
Query: 177 TAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYV 236
+ +P L+ G DI + K CFTK+Y ++V
Sbjct: 273 ------------------------YKIPEKLLLSKGMLFDIKTINDKTTNCFTKAYSKFV 308
Query: 237 KGTGSLLA--TVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYAL 294
+GTGS+L T + +SL LRYF+P+E+ H FP FQFP +++ Q Y L
Sbjct: 309 EGTGSVLQLDTNYKADINVPNSLIPMKLRYFSPKEITRFHFFPEQFQFPPSVTVAQGYRL 368
Query: 295 LGNSLSIAVVAPLLQYLF 312
+GNSL+ +V+ LL+YLF
Sbjct: 369 IGNSLNCKIVSELLKYLF 386
>gi|66806465|ref|XP_636955.1| DNA -methyltransferase [Dictyostelium discoideum AX4]
gi|74852778|sp|Q54JH6.1|CMT1_DICDI RecName: Full=DNA (cytosine-5)-methyltransferase
gi|60465358|gb|EAL63449.1| DNA -methyltransferase [Dictyostelium discoideum AX4]
Length = 379
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 166/329 (50%), Gaps = 51/329 (15%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFE-- 59
+ A+AWL+SPPCQP+TR GLQK D R SF +L+++ PP + +ENV GF
Sbjct: 67 FKANAWLMSPPCQPFTRLGLQKDDQDNRTNSFFHLLDVLTKIKDPPTYILIENVFGFAKK 126
Query: 60 -TSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK-PLSFRC-QLLNNQ 116
+S+T +++ L +Y QEF LSP QFG+ R RYFC+AKR L+F+ Q +N+
Sbjct: 127 GSSNTRDHLLDTLIKMNYSFQEFHLSPQQFGLANQRLRYFCIAKRNGKLNFKKEQDKHNE 186
Query: 117 LLRSPSPLLGNDDMTVITKHDQ-------PDDSWDKLLESCDPVERFLEFSNSGDQVNTE 169
+ +++ K+D P + LE CD + + + + D++
Sbjct: 187 KVDENKLNNNSNNNNEQNKYDNLKILDHIPGYDFHTTLEECDEISNYFDKDLTDDEL--- 243
Query: 170 TGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFT 229
+ + VP +L+ G DI DSK C T
Sbjct: 244 ----------------------------YEKYKVPHNLLLSKGMLFDIKQKDSKTSNCVT 275
Query: 230 KSYYRYVKGTGSLLATVQPKNKGKA-----SSLKEQHLRYFTPREVANLHSFPGDFQFPH 284
KSY ++++GTGS+ +Q N KA SL LRYF+P+E+ LH FP +F+F
Sbjct: 276 KSYGKFIEGTGSI---IQMDNNFKADINDNKSLIPLKLRYFSPKEITRLHGFPEEFKFSP 332
Query: 285 HLSLRQRYALLGNSLSIAVVAPLLQYLFA 313
L+ Q Y L+GNSL++ +V+ LL+ L +
Sbjct: 333 KLTTIQCYRLIGNSLNVKIVSELLKVLVS 361
>gi|391328705|ref|XP_003738825.1| PREDICTED: tRNA (cytosine-5-)-methyltransferase-like [Metaseiulus
occidentalis]
Length = 457
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 162/319 (50%), Gaps = 69/319 (21%)
Query: 9 LSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMI 68
+SPPCQP+TRQG Q D R SFL +L+++P P M+F+ENV GFE+S +
Sbjct: 83 MSPPCQPFTRQGKQLGERDPRTQSFLHLLKVLPQLESRPKMIFLENVRGFESSPVCHGFL 142
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL-----SFRCQLLNNQLLRSPSP 123
+ L N ++ + LSP QFG+P SR RY+CLA R+ L + +++++ PS
Sbjct: 143 QFLENCGFVYAQCSLSPTQFGIPNSRLRYYCLAIRQDLVQTAYKHMFSVDPSKIIQDPSF 202
Query: 124 LLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDF 183
L ++ +T VE FL
Sbjct: 203 FLSESEVPPMTT-----------------VEHFL-------------------------- 219
Query: 184 GAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLL 243
R D L+ +++E+ +DIV P S CCFTK+Y RY+KGTGS++
Sbjct: 220 ----------RGAENDELLLDEAVLEKNCMVLDIVLPSSTNSCCFTKNYGRYMKGTGSVI 269
Query: 244 ATVQPK----------NKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYA 293
A + PK ++ + +++K+ LR F+P EV++L FP F+FP SL++RY
Sbjct: 270 AEL-PKARIDEAYSAPDETRLAAIKDLKLRLFSPEEVSSLMCFPSSFRFPETTSLKERYH 328
Query: 294 LLGNSLSIAVVAPLLQYLF 312
LLGNS+++ +V+ LLQ++
Sbjct: 329 LLGNSVNVYIVSKLLQFML 347
>gi|413950583|gb|AFW83232.1| hypothetical protein ZEAMMB73_174249 [Zea mays]
Length = 172
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 75/101 (74%), Positives = 87/101 (86%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
Y AHAWLLSPPCQPYTRQGLQK S+DARAFSF+KIL L+ PP MLFVENVVGFE S
Sbjct: 70 YKAHAWLLSPPCQPYTRQGLQKHSADARAFSFIKILNLMQDMSYPPQMLFVENVVGFEVS 129
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK 102
DTH +++E+L++ ++ TQEFILSPLQFGVPYSRPRYFCL +
Sbjct: 130 DTHDQLLEVLSSLNFNTQEFILSPLQFGVPYSRPRYFCLVR 170
>gi|195350999|ref|XP_002042024.1| GM26726 [Drosophila sechellia]
gi|194123848|gb|EDW45891.1| GM26726 [Drosophila sechellia]
Length = 330
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 112/334 (33%), Positives = 154/334 (46%), Gaps = 86/334 (25%)
Query: 4 AHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDT 63
A+ L+SPPCQP+TRQGLQ+ + D R+ + + LIP ++L +ENV GFE+S
Sbjct: 55 ANMLLMSPPCQPHTRQGLQRDTEDKRSDALTHLCGLIPECQNLQYIL-MENVKGFESSQA 113
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSP 123
+ IE L S + +EFIL+P QF VP +R RY+C+A++
Sbjct: 114 RNQFIESLERSGFHWREFILTPTQFNVPNTRYRYYCIARK-------------------- 153
Query: 124 LLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTET-GFLSTGTAAVDD 182
G D F +GDQ+ E G ++ A
Sbjct: 154 --GAD------------------------------FPFAGDQIWEEMPGAIAQNQALSQI 181
Query: 183 FGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGS- 241
EE V D FLVP ++ + MDI++P R CFTK Y Y +GTGS
Sbjct: 182 AEIVEENVSAD-------FLVPDDVLTKRVLVMDIIHPAQSRSMCFTKGYTHYTEGTGSA 234
Query: 242 --------------LLATVQPKNKGKASS----------LKEQHLRYFTPREVANLHSFP 277
L+ + NK S L + LRYFTPREVA L SFP
Sbjct: 235 YTPLSEDESHRIFELVKEIDTSNKDAPKSENILQQRLDLLHQVKLRYFTPREVARLMSFP 294
Query: 278 GDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYL 311
DF+FP + RQ+Y LLGNS+++ VV L++ L
Sbjct: 295 EDFEFPPETTNRQKYRLLGNSINVKVVGELIKLL 328
>gi|383865745|ref|XP_003708333.1| PREDICTED: tRNA (cytosine-5-)-methyltransferase-like [Megachile
rotundata]
Length = 359
Score = 163 bits (413), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 106/322 (32%), Positives = 162/322 (50%), Gaps = 52/322 (16%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
L+SPPCQPYTR GLQK D R+ S +LELI H +K + +ENV GFE S+ +
Sbjct: 71 LMSPPCQPYTRVGLQKDILDNRSSSLFHVLELI-HQIKSLKYILLENVKGFEKSEMRNAV 129
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGN 127
++ + + + +E I+SP QFG+P +R RY+ LAKR L F N ++ + L
Sbjct: 130 LKCMNDCRFHYKEIIISPCQFGIPNTRYRYYLLAKRNDLKF----CFNHIISNFH--LPE 183
Query: 128 DDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAE 187
D + ++ P + L E C +E SN + L V+D
Sbjct: 184 DILKLL-----PKSKHNLLAEKC-----CMESSNMDKKCYKLENILEN----VED----- 224
Query: 188 ETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLA--- 244
+++P L+++ MDI +S CCFTK+Y RYV+GTGS+
Sbjct: 225 -----------SEYMIPKKLLQKRAWLMDIRTSESTGSCCFTKAYGRYVEGTGSVYCPYS 273
Query: 245 ------------TVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRY 292
++ A +L++ LRYFTP+EV L FP +F FP ++ +Q+Y
Sbjct: 274 DELIKETFLKAREYNCQSPEAAETLEKLKLRYFTPKEVCRLMCFPEEFMFPKSITCKQKY 333
Query: 293 ALLGNSLSIAVVAPLLQYLFAQ 314
LLGNS+++ VV+ L+ L+ +
Sbjct: 334 RLLGNSINVHVVSRLIYLLYTE 355
>gi|328869161|gb|EGG17539.1| DNA (cytosine-5-)-methyltransferase [Dictyostelium fasciculatum]
Length = 373
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 158/314 (50%), Gaps = 59/314 (18%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
Y A+ WL+SPPCQP+ R GL+K D R SF+ +L L+ PP + +ENV GFE S
Sbjct: 84 YKANTWLMSPPCQPFCRVGLEKGLEDNRTNSFVNLLTLLGKLESPPTYILIENVFGFEKS 143
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSP 121
D +IE Y QEF LSP QFG+P R RYFC+AK LS + + +L+
Sbjct: 144 DARELLIETFMRLKYQYQEFHLSPTQFGLPNQRLRYFCIAK---LSDKPTIRKINILKE- 199
Query: 122 SPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVD 181
P + + I+++ L++ +P E + +
Sbjct: 200 IPTFKTIEPSAISQY----------LDTTNPEETY------------------------E 225
Query: 182 DFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGS 241
F +ET L+ + G DI K CFT+SY ++V+GTGS
Sbjct: 226 KFKIPQET-----------------LLSKRGMLFDIKTMGEKTTNCFTRSYSKFVEGTGS 268
Query: 242 LL---ATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNS 298
+L +++P + +SL LRYFTP+E+ LH FP +F+F L+ +Q + L+GNS
Sbjct: 269 VLQLNESLKP-DASDPNSLLPLRLRYFTPKEITRLHGFPEEFKFHPSLTSQQCFRLIGNS 327
Query: 299 LSIAVVAPLLQYLF 312
L++ +V+ L++YL+
Sbjct: 328 LNVKIVSELIKYLY 341
>gi|195578681|ref|XP_002079192.1| GD23816 [Drosophila simulans]
gi|194191201|gb|EDX04777.1| GD23816 [Drosophila simulans]
Length = 345
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/333 (33%), Positives = 153/333 (45%), Gaps = 84/333 (25%)
Query: 4 AHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDT 63
A+ L+SPPCQP+TRQGLQ+ + D R+ + + LIP ++L +ENV GFE+S
Sbjct: 69 ANMLLMSPPCQPHTRQGLQRDTEDKRSDALTHLCGLIPECQNLQYIL-MENVKGFESSQA 127
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSP 123
+ IE L S + +EFIL+P QF VP +R RY+C+A RK F P
Sbjct: 128 RNQFIESLERSGFHWREFILTPTQFNVPNTRYRYYCIA-RKGADF--------------P 172
Query: 124 LLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDF 183
G D W+++ G ++ A
Sbjct: 173 FAG-------------DKIWEEM-----------------------PGAIAQNQALSQIA 196
Query: 184 GAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGS-- 241
EE V D FLVP ++ + MDI++P R CFTK Y Y +GTGS
Sbjct: 197 EIVEENVSAD-------FLVPDDVLTKRVLVMDIIHPAQSRSMCFTKGYTHYTEGTGSAY 249
Query: 242 -------------LLATVQPKNKGKASS----------LKEQHLRYFTPREVANLHSFPG 278
L+ + NK S L + LRYFTPREVA L SFP
Sbjct: 250 TPLSEDESHRIFELVKEIDTSNKDAPKSEKILQQRLDLLHQVKLRYFTPREVARLMSFPE 309
Query: 279 DFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYL 311
DF+FP + RQ+Y LLGNS+++ VV L++ L
Sbjct: 310 DFEFPPETTNRQKYRLLGNSINVKVVGELIKLL 342
>gi|195472313|ref|XP_002088445.1| GE18570 [Drosophila yakuba]
gi|194174546|gb|EDW88157.1| GE18570 [Drosophila yakuba]
Length = 331
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/333 (34%), Positives = 155/333 (46%), Gaps = 84/333 (25%)
Query: 4 AHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDT 63
A+ L+SPPCQP+TRQGLQK + D R+ + I LIP ++L +ENV GFE S
Sbjct: 55 ANMLLMSPPCQPHTRQGLQKDTEDKRSDALTHICGLIPECQNLQYIL-MENVKGFEISQA 113
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSP 123
+ IE L S++ +EFIL+P QF VP +R RY+C+A RK F P
Sbjct: 114 RNQFIEALERSEFHWREFILTPTQFNVPNTRYRYYCIA-RKGADF--------------P 158
Query: 124 LLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDF 183
G+ K+ E+ + G A +
Sbjct: 159 FAGS-----------------KIWEA-----------------------MPGGIAQNQNL 178
Query: 184 GAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGS-- 241
E VE + VS D FLVP ++ + MDI++P R CFTK Y Y +GTGS
Sbjct: 179 SQISEIVEEN--VSSD-FLVPDDVLTKRVLVMDIIHPAQSRSMCFTKGYTHYTEGTGSAY 235
Query: 242 -------------LLATVQPKNKGKASS----------LKEQHLRYFTPREVANLHSFPG 278
L+ + N S L + LRYFTPREVA L SFP
Sbjct: 236 TPLSEEESHRIFELVKEIDTNNHDDVKSEKILEQRLDLLHQVKLRYFTPREVARLMSFPE 295
Query: 279 DFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYL 311
DF+FP + RQ+Y LLGNS+++ VV L++ L
Sbjct: 296 DFEFPPETTNRQKYRLLGNSINVKVVGELIKLL 328
>gi|426201930|gb|EKV51853.1| hypothetical protein AGABI2DRAFT_198459 [Agaricus bisporus var.
bisporus H97]
Length = 371
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/349 (33%), Positives = 166/349 (47%), Gaps = 80/349 (22%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQ-KQSSDARAFSFLKILE-LIPHTVKP---PHMLFVENVV 56
+ A WLLSP CQPYT K ++D RA SFL +++ ++P K P L VENV
Sbjct: 67 FNADFWLLSPACQPYTVLNPNAKGATDPRARSFLYLVQDILPQLAKMNALPSRLLVENVA 126
Query: 57 GFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQ 116
GFETS T ++ + + Y T E +L+PLQFGVP SR RY+ LAK+ PL F
Sbjct: 127 GFETSFTRQTLVSAMRSLGYRTLELLLTPLQFGVPNSRLRYYFLAKKDPLRFAHT----- 181
Query: 117 LLRSPSPLLGNDDMTVITKH------DQPDDSWDKLLESCDPVERFLEFSNSGDQVNTET 170
G +D+ I +H D DD +D D ER + +
Sbjct: 182 ---------GKEDIDRIWRHIPGQGEDWIDDRFD------DSKER------NRVHIPRLN 220
Query: 171 GFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTK 230
+L T AE + D++ +P ++ +WGS D++YP S R CCFT+
Sbjct: 221 SYLDT---------PAE---------TADYYTIPDKVLFKWGSLFDVIYPSSCRSCCFTR 262
Query: 231 SYYRYVKGTGSLL---------------ATVQPKNKGKASSLKEQHLRYFTPREVANLHS 275
Y + V+G GS+L A +P N L LRYF+P E+ L
Sbjct: 263 GYTQLVRGAGSILQMNEDLDTTTVFDEFAVARPDNPDAVRILDPLRLRYFSPEELLRLFG 322
Query: 276 F--------PGDFQFPHH--LSLRQRYALLGNSLSIAVVAPLLQYLFAQ 314
F P F++P + LR +Y L+GNS+++ VV L++YLF +
Sbjct: 323 FNPRIDSLEPAYFKWPDTKVVRLRSQYRLIGNSVNVTVVQALIEYLFIE 371
>gi|328782909|ref|XP_393991.3| PREDICTED: tRNA (cytosine-5-)-methyltransferase [Apis mellifera]
Length = 360
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/325 (34%), Positives = 162/325 (49%), Gaps = 58/325 (17%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
L+SPPCQPYTR GLQK D R+ S L +L LIP +K + +ENV GFE S+ +
Sbjct: 72 LMSPPCQPYTRIGLQKDMLDNRSSSLLHVLSLIPQ-IKTLKYILLENVKGFEKSEMRNAV 130
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRC---QLLNNQLLRSPSPL 124
++ + S + +E ILSP QFG+P +R RY+ LAK+ L F C +LN +L S +
Sbjct: 131 LKCINTSGFNYKELILSPCQFGIPNTRYRYYLLAKKNNLEF-CFDQSVLNFELSDSILKI 189
Query: 125 LGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFG 184
L ++TK +S K ++C +E LE
Sbjct: 190 LPKSKYNLLTKKSCTQNS--KTDKNCYTLENILEH------------------------- 222
Query: 185 AAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLA 244
V +L+P L+E+ MDI S CCFTK+Y YV+GTGS+
Sbjct: 223 -----------VEGSQYLIPKKLLEKRVWLMDIRTSQSNGSCCFTKAYSHYVEGTGSVYC 271
Query: 245 TVQPKNKGKASS---------------LKEQHLRYFTPREVANLHSFPGDFQFPHHLSLR 289
K +A S L++ LRYFTPRE+ L FP +F FP +++ +
Sbjct: 272 PYSEKTIKEAFSEANKYERQSLEVSKILEKLMLRYFTPREICRLMCFPEEFIFPEYITDK 331
Query: 290 QRYALLGNSLSIAVVAPLLQYLFAQ 314
Q+Y LLGNS+++ VV+ L+ L+ +
Sbjct: 332 QKYRLLGNSINVYVVSRLIFLLYTE 356
>gi|426364086|ref|XP_004049153.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase [Gorilla
gorilla gorilla]
Length = 374
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/327 (34%), Positives = 170/327 (51%), Gaps = 49/327 (14%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
L+SPPCQP+TR G Q +D+R SFL IL+++P K P + +ENV GFE S T
Sbjct: 74 LMSPPCQPFTRIGRQGDMTDSRTNSFLYILDILPRLQKLPKYILLENVKGFEVSSTS--- 130
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRC---QLLNNQLLRS-- 120
I+ N G+P SR RYF +AK +PL F+ L+ + S
Sbjct: 131 IDFTNN--------------LGIPNSRLRYFLIAKLQSEPLPFQAPGQVLMEFPKIESVH 176
Query: 121 PSPLLGNDDMTVITKHDQPDDSWDKLLESC--DPVERFLEFSNSGDQVNTETGFLSTGTA 178
P + + + K+ +P+ S+D ++ D + LE + + N + LS
Sbjct: 177 PQKYAMDVENKIQEKNIEPNISFDGSIQCSGKDAILFKLETAEEIHRKNQQDSDLSV--K 234
Query: 179 AVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKG 238
+ DF ++ ++ +L+P + R+ +DIV P +R CFTK Y Y++G
Sbjct: 235 MLKDF--------LEDDTDMNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSYIEG 286
Query: 239 TGSLLAT---VQPKNKGKA----------SSLKEQHLRYFTPREVANLHSFPGDFQFPHH 285
TGS+L T VQ +N K+ + L LRYFTP+E+ANL FP +F FP
Sbjct: 287 TGSVLQTAEDVQVENIYKSLTNLSQEEQITKLSMLKLRYFTPKEIANLLGFPPEFGFPKK 346
Query: 286 LSLRQRYALLGNSLSIAVVAPLLQYLF 312
++++QRY LLGNSL++ VVA L++ L+
Sbjct: 347 ITVKQRYRLLGNSLNVHVVAKLIKILY 373
>gi|322796386|gb|EFZ18927.1| hypothetical protein SINV_80475 [Solenopsis invicta]
Length = 354
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 101/316 (31%), Positives = 156/316 (49%), Gaps = 58/316 (18%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
L+SPPCQP+TR GL+K + D R+ S L IL LI +K + +ENV GFE S K+
Sbjct: 79 LMSPPCQPFTRLGLRKDTLDNRSCSLLHILNLIS-DLKDLKYILLENVKGFEVSQMRDKL 137
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF---RCQLLNNQLLRSPSPL 124
++ + + Y+ +EFILSP QFG+P SR RY+ LAK+ L F + L N+ L L
Sbjct: 138 VDCIESCGYIYREFILSPCQFGIPNSRHRYYLLAKKNNLKFCFEQSSLENDLLPELFELL 197
Query: 125 LGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFG 184
+ + + K + + +++L + D + +E S
Sbjct: 198 PKSKHLALAEKKGKINPKFNRLCYTLDNILENIEESK----------------------- 234
Query: 185 AAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSL-- 242
+LVP ++++ +DI +S CCFTK Y Y +GTGS+
Sbjct: 235 ----------------YLVPSKVLQKRAWVLDIRTSESNGSCCFTKGYGHYAEGTGSVYC 278
Query: 243 -------------LATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLR 289
+ + + + + L + LR+F+P+EV L FP DF FP H++ +
Sbjct: 279 PFTDEIIRLKYNEVGSHENDSDKQLQILSDLKLRFFSPKEVCRLMCFPEDFHFPEHITDK 338
Query: 290 QRYALLGNSLSIAVVA 305
Q+Y LLGNSL+I VV+
Sbjct: 339 QKYRLLGNSLNIHVVS 354
>gi|256078707|ref|XP_002575636.1| DNA (cytosine-5)-methyltransferase [Schistosoma mansoni]
gi|339776689|gb|AEK05284.1| DNA-methyltransferase 2 isoform 1 [Schistosoma mansoni]
Length = 368
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 106/337 (31%), Positives = 171/337 (50%), Gaps = 61/337 (18%)
Query: 3 GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD 62
A+ W L PPCQP+TR G + +D R+ SF +L+LI ++ P + +ENV GFE S+
Sbjct: 66 NANVWSLCPPCQPFTRLGKRMCEADNRSSSFFHVLDLI--SILKPAGIILENVKGFEHSE 123
Query: 63 THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQL----L 118
++IE+L + DY ++F+LSPLQFG+P R R++ LA+ + S+ + L
Sbjct: 124 PWRRLIEVLNSCDYEYRQFLLSPLQFGIPNCRLRFYLLARLRSSSWNSNFKMGKSESIDL 183
Query: 119 RSP--SPLLGNDDMT----VITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGF 172
R P +P+L T VI+ + DD++ + ++ C P+ FL + + E F
Sbjct: 184 RPPIDAPMLPGCQCTSCSGVISHIEHTDDNFTEYIQFCRPISEFLLVPSDSSK---ELYF 240
Query: 173 LSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSY 232
L ++C ++R+ +DIV K+ CFTK Y
Sbjct: 241 LD------------------EKC------------LQRYFRVLDIVRSCDKKTRCFTKGY 270
Query: 233 YRYVKGTGSLLAT-VQPKNKGKASSLKEQH---------------LRYFTPREVANLHSF 276
+ ++GTGS+ T ++ + K ++ E + LR+F REVAN+ F
Sbjct: 271 SKRLEGTGSVFQTSMENETSEKITNFYEANKEDEQAVLQYAKLLKLRFFHSREVANMMCF 330
Query: 277 PGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFA 313
P F FP H++ +QR LLGNS++I VV+ L+ + F
Sbjct: 331 PKSFDFPEHITEKQRLRLLGNSVNILVVSHLIYWAFG 367
>gi|393247766|gb|EJD55273.1| S-adenosyl-L-methionine-dependent methyltransferase [Auricularia
delicata TFB-10046 SS5]
Length = 344
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 116/328 (35%), Positives = 168/328 (51%), Gaps = 69/328 (21%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQ-KQSSDARAFSFLKIL-ELIPHTVKP---PHMLFVENVV 56
Y A +LLSPPCQPYT K +D RA SF ++ ++P K P +FVENV
Sbjct: 68 YNASVFLLSPPCQPYTVLSPDAKGDADPRASSFHHLMFSVLPDLAKQCSLPRFVFVENVA 127
Query: 57 GFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQ 116
GF+ S TH ++ E+LA+ +Y T+EF+LSPLQFG+P SR R++ LAK PL F
Sbjct: 128 GFKDSVTHRQLHEMLASLNYSTREFLLSPLQFGIPNSRKRFYLLAKLGPLEFAL------ 181
Query: 117 LLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTG 176
PS V + P D+ + L S + + RFL DQ TET
Sbjct: 182 ---PPS---------VFVEWTDPRDTNEPL--SSESLARFL------DQGTTET------ 215
Query: 177 TAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYV 236
+ C+ VP ++ +W DIV P ++R CCFT+ Y
Sbjct: 216 ----------------NECI------VPDKVLLKWAHEFDIVLPSAQRTCCFTRGYTHLA 253
Query: 237 KGTGSLL---ATVQPKNKGKASS-LKEQHLRYFTPREVANLHSF--PGD----FQFPHHL 286
+G+GS+L A ++ + +A + L+ LRYFTP E+ + F P + F +P ++
Sbjct: 254 QGSGSVLQENADLEARLTDEAVAILRPLRLRYFTPTELLRIFCFLPPSESQIPFSWPANI 313
Query: 287 SLRQRYALLGNSLSIAVVAPLLQYLFAQ 314
S + +Y LLGNS+++ VV LL YLF +
Sbjct: 314 SRKTKYKLLGNSVNVLVVRHLLDYLFTE 341
>gi|380021060|ref|XP_003694392.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase-like [Apis
florea]
Length = 359
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 111/319 (34%), Positives = 159/319 (49%), Gaps = 58/319 (18%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
L+SPPCQPYTR GL+K D R+ S L +L LIP +K + +ENV GFE S+ +
Sbjct: 71 LMSPPCQPYTRIGLRKDILDNRSSSLLHVLSLIPQ-IKTLKYILLENVKGFEKSEMRNAV 129
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRC---QLLNNQLLRSPSPL 124
++ + S + +E ILSP QFG+P +R RY+ LAK+K L F C +LN +L S +
Sbjct: 130 LKCINTSGFNYKELILSPCQFGIPNTRYRYYLLAKKKNLEF-CFDQSVLNFELSDSILKI 188
Query: 125 LGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFG 184
L ++ + DS K ++C +E LE
Sbjct: 189 LPKSKYNLLAEKSYNQDS--KTDKNCYTLENILEH------------------------- 221
Query: 185 AAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLA 244
V +L+P L+E+ MDI S CCFTK+Y YV+GTGS+
Sbjct: 222 -----------VEGSQYLIPKKLLEKRVWLMDIRTSQSNGSCCFTKAYSHYVEGTGSVYC 270
Query: 245 TVQPKNKGKASS---------------LKEQHLRYFTPREVANLHSFPGDFQFPHHLSLR 289
K +A S L++ LRYFTPRE+ L FP +F FP +++ +
Sbjct: 271 PYSEKTIKEAFSEANKYERQSLEVSKILEKLMLRYFTPREICRLMCFPEEFTFPEYITDK 330
Query: 290 QRYALLGNSLSIAVVAPLL 308
Q+Y LLGNS++I VV+ L+
Sbjct: 331 QKYRLLGNSINIYVVSRLI 349
>gi|21428368|gb|AAM49844.1| GM14972p [Drosophila melanogaster]
Length = 331
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 109/333 (32%), Positives = 154/333 (46%), Gaps = 84/333 (25%)
Query: 4 AHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDT 63
A+ L+SPPCQP+TRQGLQ+ + D R+ + + LIP + ++L +ENV GFE+S
Sbjct: 55 ANMLLMSPPCQPHTRQGLQRDTEDKRSDALTHLCGLIPECQELEYIL-MENVKGFESSQA 113
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSP 123
+ IE L S + +EFIL+P QF VP +R RY+C+A RK F P
Sbjct: 114 RNQFIESLERSGFHWREFILTPTQFNVPNTRYRYYCIA-RKGSDF--------------P 158
Query: 124 LLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDF 183
G W+++ G ++ A
Sbjct: 159 FAGGK-------------IWEEM-----------------------PGAIAQNQALSQIA 182
Query: 184 GAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGS-- 241
EE V D FLVP ++ + MDI++P R CFTK Y Y +GTGS
Sbjct: 183 EIVEENVSPD-------FLVPDDVLTKRVLVMDIIHPAQSRSMCFTKGYTHYTEGTGSAY 235
Query: 242 -------------LLATVQPKNKGKASS----------LKEQHLRYFTPREVANLHSFPG 278
L+ + N+ + S L + LRYFTPREVA L SFP
Sbjct: 236 TPLSEDESHRIFELVKEIDTSNQDASKSEKILQQRLDLLHQVRLRYFTPREVARLMSFPE 295
Query: 279 DFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYL 311
+F+FP + RQ+Y LLGNS+++ VV L++ L
Sbjct: 296 NFEFPPETTNRQKYRLLGNSINVKVVGELIKLL 328
>gi|340725061|ref|XP_003400893.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase-like [Bombus
terrestris]
Length = 354
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 115/325 (35%), Positives = 166/325 (51%), Gaps = 63/325 (19%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
L+SPPCQPYTR GLQ+ SD R+ S L +L LIP H+L +ENV GFE S+ +
Sbjct: 71 LMSPPCQPYTRVGLQRDISDNRSSSLLHVLSLIPQLRTLKHIL-LENVKGFENSEMRNAV 129
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF---RCQLLNNQLLRSPSPL 124
++ + S + +E ILSP QFG+P +R RY+ LAKRK F C +LN L +
Sbjct: 130 LKCMNMSGFNYKELILSPCQFGIPNTRYRYYLLAKRKDSEFCFDHC-ILNFNLPEAVLKA 188
Query: 125 LGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFG 184
L ++ + + D ++C +E LE
Sbjct: 189 LPGSKHNLLLEGAKTD-------KNCYKLENILE-------------------------- 215
Query: 185 AAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLA 244
VD+ +L+P L+++ DI S CCFTK+Y Y +GTGS+ +
Sbjct: 216 ------NVDK----SQYLIPRKLLQKRAWLFDIRTSQSDGSCCFTKAYSHYAEGTGSVYS 265
Query: 245 -----TVQ----PKNK-GKAS-----SLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLR 289
T+Q NK GK S L++ LRYFTPREV+ L FP +F+FP H++ +
Sbjct: 266 PYTEETIQQIFLEANKYGKQSLEASEVLQKLMLRYFTPREVSRLMCFPEEFKFPEHITCK 325
Query: 290 QRYALLGNSLSIAVVAPLLQYLFAQ 314
QRY LLGNS+++ VV+ L+ L+ +
Sbjct: 326 QRYRLLGNSINVYVVSRLIFLLYTE 350
>gi|328772423|gb|EGF82461.1| hypothetical protein BATDEDRAFT_3612, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 344
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 161/325 (49%), Gaps = 61/325 (18%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
Y ++ WLLSPPCQP+T+ G D R+ + L+I+E++ H PP +FVENV FETS
Sbjct: 67 YDSNCWLLSPPCQPFTQGGKSLDHQDNRSLALLRIIEILQHIAIPPRFVFVENVPNFETS 126
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSP 121
+ +++++ L +Y +E+++SP+Q G+ R RY+ AK LRS
Sbjct: 127 ECRSRLVQALDQCNYDVKEYLISPIQIGISNDRRRYYLAAK---------------LRS- 170
Query: 122 SPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVD 181
S G ++ SC L+ S+ ++++E S+G A
Sbjct: 171 SISTGKSNL------------------SC------LQTSHMITRLDSE----SSGIAL-- 200
Query: 182 DFGAAEETVEVDRCVSIDHFLVPLS-LIERWGSAMDIVYPDSKRCCCFTKSY-YRYVKGT 239
A T C I FLVP +++R D+V P RC CFTK+Y ++ G+
Sbjct: 201 PIPPAISTYLEQHC-DISEFLVPEQYILKRKTFRFDLVKPTDTRCSCFTKAYGSHHIIGS 259
Query: 240 GSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGD------------FQFPHHLS 287
GS L T + ++ R+FTPRE+A LH FP D F+FP +
Sbjct: 260 GSFLQTANLDVSSRVFAIVASRPRFFTPREIARLHGFPIDGVLNGSIGMLHTFEFPDSVP 319
Query: 288 LRQRYALLGNSLSIAVVAPLLQYLF 312
Q+Y LLGNSLS+ VVA LL+ LF
Sbjct: 320 RSQQYKLLGNSLSVDVVAYLLKLLF 344
>gi|213403582|ref|XP_002172563.1| tRNA (cytosine-5-)-methyltransferase [Schizosaccharomyces japonicus
yFS275]
gi|212000610|gb|EEB06270.1| tRNA (cytosine-5-)-methyltransferase [Schizosaccharomyces japonicus
yFS275]
Length = 326
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 100/309 (32%), Positives = 149/309 (48%), Gaps = 63/309 (20%)
Query: 7 WLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAK 66
W LSP CQPYTR G Q+ +D RA +FL +LE++P P +F+ENV GFETS T K
Sbjct: 76 WTLSPSCQPYTRLGKQQGHADPRAAAFLHVLEILPTCSYKPKFIFIENVFGFETSWTAEK 135
Query: 67 MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLG 126
E+L S Y+ E +LSP Q G+P SR R++ LA+
Sbjct: 136 CREVLKASGYVFHEVLLSPFQIGIPNSRLRWYGLAR------------------------ 171
Query: 127 NDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAA 186
K D+ ++SW+ L D E +N
Sbjct: 172 -------LKRDEIENSWNPKLSFPDKAETIRPINNY------------------------ 200
Query: 187 EETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATV 246
+D+ V+++ VP+ +++++G +DIV P CCFT+ Y V+G+GS+L
Sbjct: 201 -----LDKEVNMEKHSVPVDILQKYGHQLDIVKPSDTHSCCFTRGYTHLVQGSGSVLQMS 255
Query: 247 QPKNKGKA--SSLKEQHLRYFTPREVANLHSFPGDFQF-PHHLSLRQRYALLGNSLSIAV 303
++ KA + + LRYFT RE+A + FP +F + S + Y LLGNS++I V
Sbjct: 256 DHEDIKKAFLENRYDLCLRYFTVREIARIMGFPEEFTWQASGASDKAMYRLLGNSINIHV 315
Query: 304 VAPLLQYLF 312
V+ L + L
Sbjct: 316 VSALQKELL 324
>gi|328768493|gb|EGF78539.1| hypothetical protein BATDEDRAFT_13083 [Batrachochytrium
dendrobatidis JAM81]
Length = 350
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 161/325 (49%), Gaps = 61/325 (18%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
Y ++ WLLSPPCQP+T+ G D R+ + L+I+E++ H PP +FVENV FETS
Sbjct: 68 YDSNCWLLSPPCQPFTQGGKSLDHQDNRSLALLRIIEILQHIAIPPRFVFVENVPNFETS 127
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSP 121
+ +++++ L +Y +E+++SP+Q G+ R RY+ AK LRS
Sbjct: 128 ECRSRLVQTLDQCNYDVKEYLISPIQIGISNDRRRYYLAAK---------------LRS- 171
Query: 122 SPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVD 181
S G ++ SC L+ S+ ++++E S+G A
Sbjct: 172 SISTGKSNL------------------SC------LQTSHMITRLDSE----SSGIAL-- 201
Query: 182 DFGAAEETVEVDRCVSIDHFLVPLS-LIERWGSAMDIVYPDSKRCCCFTKSY-YRYVKGT 239
A T C I FLVP +++R D+V P RC CFTK+Y ++ G+
Sbjct: 202 PIPPAISTYLEQHC-DIPEFLVPEQYILKRKTFRFDLVKPTDTRCSCFTKAYGSHHIIGS 260
Query: 240 GSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGD------------FQFPHHLS 287
GS L T + ++ R+FTPRE+A LH FP D F+FP +
Sbjct: 261 GSFLQTANLDVSSRVFAIVASRPRFFTPREIARLHGFPIDGVLNGSIGMLHTFEFPDSVP 320
Query: 288 LRQRYALLGNSLSIAVVAPLLQYLF 312
Q+Y LLGNSLS+ VVA LL+ LF
Sbjct: 321 RSQQYKLLGNSLSVDVVAHLLKLLF 345
>gi|144952808|gb|ABP04058.1| DNA methyltransferase 2 [Macrobrachium rosenbergii]
Length = 396
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 106/320 (33%), Positives = 169/320 (52%), Gaps = 21/320 (6%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
++SPPCQP+TRQGL++ D R S L ++ L+ PP M+ +ENV GFE S ++
Sbjct: 79 MMSPPCQPFTRQGLKRDVEDTRTSSLLHLISLLEKLSHPPKMILLENVAGFEKSLAREQL 138
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGN 127
+E+L + +Y+ QEF+LSP +FG+P SR RY+ LAK++ F C ++N++ + L
Sbjct: 139 MEMLRSKNYVWQEFLLSPTEFGIPNSRLRYYLLAKQQLYPF-CLDVSNEIKEELTACLCI 197
Query: 128 DDMTVITKHDQPDDSWDKLLESC-DPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAA 186
I PD ++ +C PV L+ N + D +
Sbjct: 198 RRERDIQAPVLPDAR--EICANCGKPVINSLQNLLRDFHGNINNELHQPRKSYSDLSLSL 255
Query: 187 EETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSL---- 242
+E D ++++ +L+ ++ ++ +DIV +SKR CCFTK Y YV+GTGS+
Sbjct: 256 SSFMESD--INVEPYLLKDKVLSKYCMILDIVDRESKRSCCFTKGYGHYVEGTGSVIKGN 313
Query: 243 -----------LATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQR 291
L+ ++ + + LK+ RYFT E+ L FP F FP L+++Q+
Sbjct: 314 SDLDVDEVYNKLSRLELGDPKRLDLLKQLKFRYFTASEILRLMCFPKWFSFPPSLTMKQK 373
Query: 292 YALLGNSLSIAVVAPLLQYL 311
Y +LGNS++I VV LL L
Sbjct: 374 YRVLGNSINILVVTSLLLIL 393
>gi|428178936|gb|EKX47809.1| hypothetical protein GUITHDRAFT_137189 [Guillardia theta CCMP2712]
Length = 380
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 166/351 (47%), Gaps = 87/351 (24%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
+ A WL+SPPCQPYT G QK D RA + L + +++ +PP+ + +ENV F+ S
Sbjct: 78 FNADTWLMSPPCQPYTSMGKQKDDQDPRARALLHLCQVVQDMQRPPNFILLENVNNFQHS 137
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSP 121
++H + ++ L + ++ EF+LSP QFG+P R RY+ LA+R S
Sbjct: 138 NSHDRWLQALGSIGFMVHEFLLSPTQFGIPNERIRYYALARRIGKS-------------- 183
Query: 122 SPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVD 181
SW+ D + + L + + V + A +D
Sbjct: 184 --------------------SWNP-----DDIGKLLRYIPGREDVVCAAEEVEEVAAYLD 218
Query: 182 DFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAM-----DIVYPDSKRCCCFTKSYYRYV 236
E+ +VD + ++V + + +W + DIV P+S+RC CFTKSY +Y+
Sbjct: 219 ------ESSQVD----LTPYMVADNDLMKWKHGLQGYVFDIVTPESRRCSCFTKSYSKYI 268
Query: 237 KGTGSLLATVQPKNKGK-----------------------------ASSLKEQHLRYFTP 267
+GTGSLL+T +G+ ++++ LRYFT
Sbjct: 269 RGTGSLLSTNFYDEEGRLKKMNFIVLPHSGSSRCIFDVEDPWSIQDLNAMRGLKLRYFTE 328
Query: 268 REVANLHSFPGD-FQFPHHL---SLRQRYALLGNSLSIAVVAPLLQYLFAQ 314
EV+ L FP + F+FP + R Y +LGNSL++ VVA LL+YLF +
Sbjct: 329 TEVSRLMGFPEERFKFPQEMLYPKSRLGYRMLGNSLNVEVVASLLEYLFKE 379
>gi|440789532|gb|ELR10839.1| C5 cytosine-specific DNA methylase superfamily protein
[Acanthamoeba castellanii str. Neff]
Length = 366
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/336 (33%), Positives = 150/336 (44%), Gaps = 78/336 (23%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
+ A WL+SPP + SF +L L+ +PP L +ENV GFE S
Sbjct: 73 HAADIWLMSPPSR-----------------SFAHLLGLLARLDRPPSYLLLENVYGFERS 115
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVP---------------YSRPRYFCLAKRKPL 106
++ +++ LA Y QEF+LSP QFG+P +R RYF LAKR P
Sbjct: 116 ESRTQLVAALAQGGYRHQEFLLSPTQFGIPNQARRAPPPPPPLCTTTRLRYFLLAKRAPH 175
Query: 107 SFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQV 166
SF +PL T+ DP+ RF+
Sbjct: 176 SFAW-----------APLAVASSSTI------------------DPL-RFVPACAEQAAT 205
Query: 167 NTETGFLS-TGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRC 225
+ A + DF +E D +S+ VP +L+ + G DIV + R
Sbjct: 206 AADPAQPEPAAVAPLSDF------LEPDDSLSVHAHRVPDALVWKKGLLFDIVGKEDMRS 259
Query: 226 CCFTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQH---------LRYFTPREVANLHSF 276
CCFTK+Y R+V+G GS+L T P G A E LRYFTPREVA LH F
Sbjct: 260 CCFTKAYARFVEGAGSVLRTGPPLVDGWADGATEDDIGGALLALGLRYFTPREVARLHGF 319
Query: 277 PGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 312
P F FP RQ+Y LGNSL++ VVA LL+YL
Sbjct: 320 PDSFGFPEGTGERQKYQQLGNSLNVLVVARLLRYLL 355
>gi|6110464|gb|AAF03835.1|AF185647_1 DNA (5-cytosine) methyltransferase homolog [Drosophila
melanogaster]
Length = 345
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/333 (32%), Positives = 153/333 (45%), Gaps = 84/333 (25%)
Query: 4 AHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDT 63
A+ L+SPPCQP+TRQGLQ+ + D R+ + + LIP + ++L +ENV GFE+S
Sbjct: 69 ANMLLMSPPCQPHTRQGLQRDTEDKRSDALTHLCGLIPECQELEYIL-MENVKGFESSQA 127
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSP 123
+ IE L + +EFIL+P QF VP +R RY+C+A RK F P
Sbjct: 128 RNQFIESLERPGFHWREFILTPTQFNVPNTRYRYYCIA-RKGSDF--------------P 172
Query: 124 LLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDF 183
G W+++ G ++ A
Sbjct: 173 FAGGK-------------IWEEM-----------------------PGAIAQNQALSQIA 196
Query: 184 GAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGS-- 241
EE V D FLVP ++ + MDI++P R CFTK Y Y +GTGS
Sbjct: 197 EIVEENVSPD-------FLVPDDVLTKRVLVMDIIHPAQSRSMCFTKGYTHYTEGTGSAY 249
Query: 242 -------------LLATVQPKNKGKASS----------LKEQHLRYFTPREVANLHSFPG 278
L+ + N+ + S L + LRYFTPREVA L SFP
Sbjct: 250 TPLSEDESHRIFELVKEIDTSNQDASKSEKIVQQRLDLLHQVRLRYFTPREVARLMSFPE 309
Query: 279 DFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYL 311
+F+FP + RQ+Y LLGNS+++ VV L++ L
Sbjct: 310 NFEFPPETTNRQKYRLLGNSINVKVVGELIKLL 342
>gi|321476287|gb|EFX87248.1| hypothetical protein DAPPUDRAFT_187425 [Daphnia pulex]
Length = 341
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/317 (32%), Positives = 152/317 (47%), Gaps = 62/317 (19%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
++SPPCQP+TR GL+ D+R SFL +L+++PH ++ + +ENVVGFETS+
Sbjct: 76 MMSPPCQPFTRVGLKLDVEDSRCSSFLHLLDILPH-LETVSFILMENVVGFETSEMRNAF 134
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR-KPLSFRCQLLNNQLLRSPSPLLG 126
+ L N D+ +EFILSP +P SR RY+ +AK+ SF + N+ + P+ L
Sbjct: 135 TKALKNCDFHFREFILSPESIKIPNSRSRYYLVAKKCTDFSFGSE--NDIMTSFPNSRLC 192
Query: 127 NDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAA 186
+ +M V K + DP V D
Sbjct: 193 DIEMPVQEK-------------TLDPY-------------------------LVKDMSDE 214
Query: 187 EETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLAT- 245
E + +L+ + ++ +D+ CCFTK+Y Y +GTGS+L
Sbjct: 215 E----------LARYLLTDKTLFKYWRILDVRQTSDTSSCCFTKAYTHYAEGTGSVLQHD 264
Query: 246 ---------VQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLG 296
+ K + LK LRYFTPREV NL FP +F FP + SL+ RY LLG
Sbjct: 265 PNEPFHQKFAEFKEDEDIAHLKPLKLRYFTPREVGNLMGFPAEFTFPENTSLKTRYRLLG 324
Query: 297 NSLSIAVVAPLLQYLFA 313
NSL++ VV+ LL+ L
Sbjct: 325 NSLNVLVVSNLLRILLG 341
>gi|350398300|ref|XP_003485152.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase-like [Bombus
impatiens]
Length = 354
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 114/325 (35%), Positives = 164/325 (50%), Gaps = 63/325 (19%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
L+SPPCQPYTR GLQ+ SD R+ S L +L LIP H+L +ENV GFE S+ +
Sbjct: 71 LMSPPCQPYTRVGLQRDISDNRSSSLLHVLSLIPQLRTLKHIL-LENVKGFEKSEMRNAV 129
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF---RCQLLNNQLLRSPSPL 124
++ + S + +E ILSP QFG+P +R RY+ LAKRK F C +LN L +
Sbjct: 130 LKCMNMSGFNYKELILSPCQFGIPNTRYRYYLLAKRKDSEFCFDHC-ILNFNLPEAVLKA 188
Query: 125 LGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFG 184
L ++ + + D + C +E LE N E
Sbjct: 189 LPRSKHNLLLEGAKTD-------KKCYKLENILE--------NVEKS------------- 220
Query: 185 AAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLA 244
+L+P L+++ DI S CCFTK+Y Y +GTGS+ +
Sbjct: 221 ---------------QYLIPRKLLQKRAWLFDIRTSQSDGSCCFTKAYSHYAEGTGSVYS 265
Query: 245 -----TVQ----PKNK-GKAS-----SLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLR 289
T+Q NK GK S L++ LRYFTP+EV+ L FP +F+FP H++ +
Sbjct: 266 PYTEETIQQIFLEANKYGKQSLEASEVLQKLMLRYFTPKEVSRLMCFPEEFKFPEHITCK 325
Query: 290 QRYALLGNSLSIAVVAPLLQYLFAQ 314
QRY LLGNS+++ VV+ L+ L+ +
Sbjct: 326 QRYRLLGNSINVYVVSRLIFLLYTE 350
>gi|409083019|gb|EKM83376.1| hypothetical protein AGABI1DRAFT_123710 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 378
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 114/352 (32%), Positives = 164/352 (46%), Gaps = 79/352 (22%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQ-KQSSDARAFSFLKILE-LIPHTVKP---PHMLFVENVV 56
+ A WLLSP CQPYT K ++D RA SFL +++ ++P K P L VENV
Sbjct: 67 FNADLWLLSPACQPYTVLNPNAKGATDPRARSFLYLVQDILPQLAKMNALPSRLLVENVA 126
Query: 57 GFE-------TSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 109
GFE TS T ++ + + Y T E +L+PLQFGVP SR RY+ LAK+ PL F
Sbjct: 127 GFESPPSLGKTSFTRQTLVSAMRSLGYRTLELLLTPLQFGVPNSRLRYYFLAKKDPLRFA 186
Query: 110 CQLLNNQLLRSPSPLLGNDDMTVITKH--DQPDDSWDKLLESCDPVERFLEFSNSGDQVN 167
G +D+ I +H Q +D D + R +
Sbjct: 187 HT--------------GKEDIDRIWRHIPGQGEDWIDDRFDDSKERNRV--------HIP 224
Query: 168 TETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCC 227
T +L T AE + D++ +P ++ +WGS D++YP S R CC
Sbjct: 225 TLNSYLDT---------PAE---------TADYYPIPDKVLFKWGSLFDVIYPSSCRSCC 266
Query: 228 FTKSYYRYVKGTGSLL---------------ATVQPKNKGKASSLKEQHLRYFTPREVAN 272
FT+ Y + V+G GS+L A +P N L LRYF+P E+
Sbjct: 267 FTRGYTQLVRGAGSILQMNEDLDTTTVFDEFAVARPDNPDAVRILDPLRLRYFSPEELLR 326
Query: 273 LHSF--------PGDFQFPHH--LSLRQRYALLGNSLSIAVVAPLLQYLFAQ 314
L F P F++P + LR +Y L+GNS+++ VV L++YLF +
Sbjct: 327 LFGFNPRIDSLEPAYFKWPDTKVVRLRSQYRLIGNSVNVTVVQALIEYLFIE 378
>gi|119606624|gb|EAW86218.1| hCG23994, isoform CRA_b [Homo sapiens]
gi|167887560|gb|ACA05984.1| tRNA aspartic acid methyltransferase 1 variant 2 [Homo sapiens]
Length = 367
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 112/327 (34%), Positives = 169/327 (51%), Gaps = 56/327 (17%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
L+SPPCQP+TR LQK P + +ENV GFE S T +
Sbjct: 74 LMSPPCQPFTR--LQKL----------------------PKYILLENVKGFEVSSTRDLL 109
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRC---QLLNNQLLRS-- 120
I+ + N + QEF+LSP G+P SR RYF +AK +PL F+ L+ + S
Sbjct: 110 IQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPGQVLMEFPKIESVH 169
Query: 121 PSPLLGNDDMTVITKHDQPDDSWDKLLESC--DPVERFLEFSNSGDQVNTETGFLSTGTA 178
P + + + K+ +P+ S+D ++ D + LE + + N + LS
Sbjct: 170 PQKYAMDVENKIQEKNVEPNISFDGSIQCSGKDAILFKLETAEEIHRKNQQDSDLSV--K 227
Query: 179 AVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKG 238
+ DF ++ ++ +L+P + R+ +DIV P +R CFTK Y Y++G
Sbjct: 228 MLKDF--------LEDDTDVNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSYIEG 279
Query: 239 TGSLLAT---VQPKNKGKAS---SLKEQ-------HLRYFTPREVANLHSFPGDFQFPHH 285
TGS+L T VQ +N K+ S +EQ LRYFTP+E+ANL FP +F FP
Sbjct: 280 TGSVLQTAEDVQVENIYKSLTNLSQEEQITKLLILKLRYFTPKEIANLLGFPPEFGFPEK 339
Query: 286 LSLRQRYALLGNSLSIAVVAPLLQYLF 312
++++QRY LLGNSL++ VVA L++ L+
Sbjct: 340 ITVKQRYRLLGNSLNVHVVAKLIKILY 366
>gi|297720201|ref|NP_001172462.1| Os01g0612000 [Oryza sativa Japonica Group]
gi|255673459|dbj|BAH91192.1| Os01g0612000, partial [Oryza sativa Japonica Group]
Length = 148
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/105 (71%), Positives = 85/105 (80%), Gaps = 5/105 (4%)
Query: 216 DIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQ-----PKNKGKASSLKEQHLRYFTPREV 270
DIV P+SKRCCCFTKSYYRYVKGTGSLLAT K + SSLKE LR+FTPREV
Sbjct: 44 DIVCPESKRCCCFTKSYYRYVKGTGSLLATSNNLKRISKEDLEISSLKELGLRFFTPREV 103
Query: 271 ANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQA 315
ANLHSFP F FP+H+SLRQ+YA+LGNSLS+AVV PLL+YLFA+
Sbjct: 104 ANLHSFPSSFHFPNHISLRQQYAMLGNSLSVAVVGPLLRYLFAET 148
>gi|313244000|emb|CBY14873.1| unnamed protein product [Oikopleura dioica]
Length = 552
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/340 (31%), Positives = 165/340 (48%), Gaps = 63/340 (18%)
Query: 3 GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKP--PHMLFVENVVGFET 60
G + +SPPCQP+TR G QK D R L I+E I T K P + +ENV FE
Sbjct: 220 GYNTLAMSPPCQPFTRNGKQKDKEDPRTKPLLSIIEKIKTTKKKFLPRYIIMENVKFFEK 279
Query: 61 SDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR----------------- 103
S+T + L + +++ ++F++SP G P R RYF +AKR
Sbjct: 280 SETCKDFLAALDSRNFIYRQFLISPTDLGTPNQRSRYFLIAKRGKHMKFHFDPYVINWKK 339
Query: 104 -----KPLSFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWD----KLLESCDPVE 154
+P + + +L ++ ++ + D+M V +HD PD + K+ E +E
Sbjct: 340 KSAAKEPKNKKQKLDAREIPKANVKMY--DNMDVFVRHDGPDANSQILGLKIKEKIHSLE 397
Query: 155 RFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSA 214
R+++ + ++V E L+ L R+ +
Sbjct: 398 RYIQDLDFKEEVWNEIYVLTD------------------------------QLKRRFLNV 427
Query: 215 MDIVYPDSKRCCCFTKSYYRYVKGTGSL---LATVQPKNKGKASSLKEQHLRYFTPREVA 271
+DIV S R CFTK+Y +Y +GTGS+ + V+P ++ K ++ LRYFT EVA
Sbjct: 428 LDIVRTSSSRSICFTKAYGKYAQGTGSMIDMMEKVEPSDRTKDREPEDFELRYFTEMEVA 487
Query: 272 NLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYL 311
L FP DF FP L+ RQRYALLGNSL++ VVA L++ +
Sbjct: 488 GLMGFPKDFSFPPDLTTRQRYALLGNSLNVDVVAVLIKLM 527
>gi|61554791|gb|AAX46615.1| DNA methyltransferase 2 isoform a [Bos taurus]
Length = 377
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/306 (34%), Positives = 152/306 (49%), Gaps = 54/306 (17%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
L+SPPCQP+TR GLQ +D R SFL IL+++P K P + +ENV GFE S T +
Sbjct: 74 LMSPPCQPFTRIGLQGDVTDPRTNSFLHILDILPRLQKLPKYILLENVKGFEMSSTRDLL 133
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGN 127
I+ + N + QEF+LSP G+P SR RYF +AK +P F Q L+ P
Sbjct: 134 IQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQPEPFPFQAPGQVLMEFPK----- 188
Query: 128 DDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAE 187
T+ + P + E+ E +G ++ ++ +G A+ E
Sbjct: 189 ------TESEHPP-------KYAINAEKKTEEKKTGPKICFDSSTQCSGKEAI--LFKLE 233
Query: 188 ETVEVDRCVSIDH--------------------FLVPLSLIERWGSAMDIVYPDSKRCCC 227
E+DR D FL P SL+ R+ +DIV P S+R C
Sbjct: 234 TAGEIDRKHQQDSDLSVRMLKDFLEDDIDKHSFFLPPKSLL-RYALLLDIVKPTSRRSMC 292
Query: 228 FTKSYYRYVKGTGSLLAT---VQPKNKGKA-SSLKEQ---------HLRYFTPREVANLH 274
FTK Y RY++GTGS+L T VQ +N K+ +SL ++ LR+FTP+E+ANL
Sbjct: 293 FTKGYGRYIEGTGSVLQTTEDVQIENIYKSLTSLSQEEKIMRLSMLQLRFFTPKEIANLL 352
Query: 275 SFPGDF 280
FP +F
Sbjct: 353 GFPPEF 358
>gi|390603836|gb|EIN13227.1| S-adenosyl-L-methionine-dependent methyltransferase [Punctularia
strigosozonata HHB-11173 SS5]
Length = 346
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 111/352 (31%), Positives = 162/352 (46%), Gaps = 78/352 (22%)
Query: 5 HAWLLSPPCQPYT-RQGLQKQSSDARAFSFL----KILELIPHTVKPPHMLFVENVVGFE 59
H WLLSP CQPYT K + D RA SFL ++L + P L VENV GFE
Sbjct: 24 HLWLLSPACQPYTVLNPSAKGAQDPRAQSFLHLVTRVLPQLAERNDHPRCLLVENVAGFE 83
Query: 60 TSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLR 119
+S T +++ L N Y T+E +L+PLQFGVP SR RY+ LAK + S Q+ ++ +
Sbjct: 84 SSSTRTTLVDTLRNLGYETRELLLTPLQFGVPNSRLRYYLLAKLRTTSPPPQITDHSAVL 143
Query: 120 SPSPLLGND--DMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGT 177
P LG D D I +++ P L P E G +V+ +L+T
Sbjct: 144 RHIPGLGEDWVDPRSIDQNNGP-------LGEAQPAE--------GSKVHALCRYLNTD- 187
Query: 178 AAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVK 237
++ +P ++++WG DIV P S R CCFT+ Y + V+
Sbjct: 188 -------------------GMEACTIPDRVLQKWGRLFDIVLPSSTRSCCFTRGYTQLVE 228
Query: 238 GTGSLLAT-------------VQPKNKGKASS---LKEQHLRYFTPREVANLHSF----- 276
GS+L + + G + L LRYF P E+ L F
Sbjct: 229 SAGSILQMNETLDTTAIFDEFLSAQENGDPDAVRILNSLRLRYFHPDELLRLFGFRRPVP 288
Query: 277 ---------------PGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFA 313
DF++P LS++ +Y L+GNS++I VV+ L++YLF+
Sbjct: 289 MMEGEKNNGSAGVEDAEDFRWPVDLSMKTKYRLIGNSINIVVVSELIRYLFS 340
>gi|336363407|gb|EGN91799.1| hypothetical protein SERLA73DRAFT_118184 [Serpula lacrymans var.
lacrymans S7.3]
gi|336378383|gb|EGO19541.1| hypothetical protein SERLADRAFT_453499 [Serpula lacrymans var.
lacrymans S7.9]
Length = 368
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 108/342 (31%), Positives = 158/342 (46%), Gaps = 69/342 (20%)
Query: 2 YGAHAWLLSPPCQPYTRQG-LQKQSSDARAFSFLKILE-LIPHTVKP---PHMLFVENVV 56
Y A WLLSP CQPYT +K +SD RA SFL ++E ++P + P + +ENV
Sbjct: 67 YRADIWLLSPSCQPYTVLNPSRKGASDPRAASFLHLIEDVLPELARQYSRPRYILIENVA 126
Query: 57 GFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQ 116
GFE S T ++ L Y E +L+PLQFG+P SR RY+ LA+ P
Sbjct: 127 GFEMSSTRQTLLSTLKEIGYFVVELLLTPLQFGIPNSRLRYYLLARLIPFE--------- 177
Query: 117 LLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTG 176
S L + D I +H + CD + +NT
Sbjct: 178 -----SVSLQDSDCGDIWRHIPG--------QGCDWTD--------PRSINT-------- 208
Query: 177 TAAVDDFGAAE--ETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYR 234
A DDF E E ++ + V+I + V ++++WG DIV P S+R CCFT+ Y R
Sbjct: 209 --AGDDFPVQELREYLDAENDVNIHSYKVTDRVLQKWGHLFDIVLPSSRRTCCFTRGYTR 266
Query: 235 YVKGTGSLLATVQPKN----------------KGKASSLKEQHLRYFTPREVANLHSF-- 276
V+ +GS+L N +G L + LRYFTP E+ L F
Sbjct: 267 LVERSGSILQANDDLNTTAVFDEFRLKHSQGIEGAVRILDQLGLRYFTPDELLRLFHFES 326
Query: 277 ----PGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQ 314
+P +++L+ +Y L+GNS+++ VV L+ YL +
Sbjct: 327 RHYPSNSLIWPDNITLKTKYKLIGNSVNVEVVTRLIDYLLEK 368
>gi|328710652|ref|XP_001949338.2| PREDICTED: tRNA (cytosine-5-)-methyltransferase-like [Acyrthosiphon
pisum]
Length = 328
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 160/320 (50%), Gaps = 67/320 (20%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILE-LIPHTVKPPHMLFVENVVGFET 60
Y L+SPPCQP+TR GL K +D R L I+E +IP + ++L VENV GFE+
Sbjct: 66 YHPDILLMSPPCQPFTRNGLVKDINDERTKPLLHIIENIIPKSESLKYIL-VENVKGFES 124
Query: 61 SDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRS 120
S K++ L+ S + +EF+LSP+ FG+ SR RY+ LAK+KPL F L N+
Sbjct: 125 SLARDKLVNALSQSGFTFKEFLLSPVHFGICNSRLRYYLLAKKKPLDFAISLPND----- 179
Query: 121 PSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAV 180
+IT ++ WD L C V++ V
Sbjct: 180 -----------IIT-----ENYWDDKL--CSRVQQ------------------------V 197
Query: 181 DDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTG 240
D + +T ++ +L+ + + G A+DIV SKR CCFT+SY Y+ GTG
Sbjct: 198 SDVLSESDT-------ELEEYLINDKQLLKGGKALDIVTKHSKRSCCFTRSYSSYLCGTG 250
Query: 241 SLLATVQPKNKGKASS--------LKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRY 292
S+ +++ +N + S LK LR+FTP EVA FP FP +S ++ Y
Sbjct: 251 SVYSSLCEENIKEIISNNDDNLEVLKSLKLRFFTPAEVAKFMCFPVS-DFP--VSKKKAY 307
Query: 293 ALLGNSLSIAVVAPLLQYLF 312
LLGNS+++ VV+ LL L
Sbjct: 308 QLLGNSINVYVVSRLLCLLL 327
>gi|395323231|gb|EJF55715.1| S-adenosyl-L-methionine-dependent methyltransferase [Dichomitus
squalens LYAD-421 SS1]
Length = 358
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 103/327 (31%), Positives = 151/327 (46%), Gaps = 56/327 (17%)
Query: 4 AHAWLLSPPCQPYT-RQGLQKQSSDARAFSFLKILE-LIPHTV---KPPHMLFVENVVGF 58
A WLLSP CQPYT L K + D RA SF++++E ++P V K P + VENV GF
Sbjct: 69 ATLWLLSPSCQPYTVLNPLAKGAEDPRAKSFIRLMEEVLPELVQMGKHPQYMLVENVAGF 128
Query: 59 ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLL 118
ETS T +++ L Y T E +L+PLQFG+P SR RY+ LAK PL+F
Sbjct: 129 ETSSTRIRLLATLRAVKYSTVELLLTPLQFGIPNSRLRYYLLAKASPLAF---------- 178
Query: 119 RSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTA 178
+D D W + + D + T +
Sbjct: 179 --------------ANANDSADRIWRHIP------------GHGSDWTDPRTQSEEESSE 212
Query: 179 AVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKG 238
E ++ D +P ++E+WG DIV P KR CCFT+ Y + +
Sbjct: 213 VE--VAEVREYLDEDTGADPPSHAIPQRVLEKWGRLFDIVRPSDKRTCCFTRGYTKLAER 270
Query: 239 TGSLLATVQPKNKGKASS----LKEQHLRYFTPREVANLHSF--PGD-------FQFPHH 285
GS+L + ++ + L+ LRYF+P E+ L +F P F +P
Sbjct: 271 AGSVLQMNEDLDRAGDDAAVRLLEPLKLRYFSPTELLRLFAFLPPNSDGQGRRRFVWPED 330
Query: 286 LSLRQRYALLGNSLSIAVVAPLLQYLF 312
+S + +Y L+GNS+++ VV L+ YLF
Sbjct: 331 ISTKTKYRLIGNSVNVRVVTELINYLF 357
>gi|291402254|ref|XP_002717405.1| PREDICTED: tRNA aspartic acid methyltransferase 1 [Oryctolagus
cuniculus]
Length = 367
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/329 (34%), Positives = 170/329 (51%), Gaps = 56/329 (17%)
Query: 5 HAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTH 64
+ L+SPPCQP+TR LQK P + +ENV GFE S T
Sbjct: 71 NMILMSPPCQPFTR--LQKL----------------------PKYILLENVKGFEVSSTR 106
Query: 65 AKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK--PLSFRCQ---LLNNQLLR 119
+I+ + N + QEF+LSP G+P +R RYF +AKR+ PL F+ L+ ++
Sbjct: 107 DLLIQTMENCGFQYQEFLLSPTSLGIPNARLRYFLVAKRQSEPLPFQAPGQVLMEFPKIQ 166
Query: 120 SPSPLLGNDDMTVIT--KHDQPDDSWDKLLESC--DPVERFLEFSNSGDQVNTETGFLST 175
S P D + K QP+ +D + D V LE + ++ + +S
Sbjct: 167 SEYPQKYAIDTKQKSEEKEIQPNICFDGSTQCSGKDTVLFKLETAEEIERKRQQDNDISV 226
Query: 176 GTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRY 235
+ DF E+ +++++ +FL P SL+ R+ +DIV P +R CFTK Y Y
Sbjct: 227 --QMLKDF--LEDDIDMNQ-----YFLPPKSLL-RYALLLDIVRPTCRRSTCFTKGYGSY 276
Query: 236 VKGTGSLLAT---VQPKN----------KGKASSLKEQHLRYFTPREVANLHSFPGDFQF 282
++GTGS+L T VQ +N + K ++L LRYFTPRE+ANL FP +F F
Sbjct: 277 IEGTGSVLQTTEDVQIENIYKSLPNLPQEEKITALSMLKLRYFTPREIANLLGFPPEFGF 336
Query: 283 PHHLSLRQRYALLGNSLSIAVVAPLLQYL 311
P ++L+Q Y LLGNSL++ VV+ L++ L
Sbjct: 337 PEKITLKQCYRLLGNSLNVHVVSKLIKML 365
>gi|403411631|emb|CCL98331.1| predicted protein [Fibroporia radiculosa]
Length = 339
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/348 (31%), Positives = 167/348 (47%), Gaps = 73/348 (20%)
Query: 2 YGAHAWLLSPPCQPYT-RQGLQKQSSDARAFSFLKILE-LIPHTVKP---PHMLFVENVV 56
Y A WLLSP CQPYT L K ++D RA SF+ ++E ++P V+ P + VENV
Sbjct: 10 YRAELWLLSPSCQPYTVLNPLAKGAADPRAKSFIHLIEDVLPEMVRDSTHPKYMLVENVA 69
Query: 57 GFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQ 116
GFE S T ++++ L + Y E +L+PLQFG+P SR RY+ LAK +P+ F + +
Sbjct: 70 GFERSSTRLRLLKTLDSLGYGVLELLLTPLQFGIPNSRLRYYLLAKAQPMPFPGTIASGL 129
Query: 117 LLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTG 176
L P G D W DP R N + + E
Sbjct: 130 RLWRHIPGHGQD--------------W------IDP--RMYIDHNDNEMIADE------- 160
Query: 177 TAAVDDFGAAEETVEVDRCVSIDHFL----VPLSLIERWGSAMDIVYPDSKRCCCFTKSY 232
+ D+ +D V H +P +++WG DI+ P ++R CCFT+ Y
Sbjct: 161 ---IRDY--------LDEDVPERHSTHPNAIPDQTLQKWGRLFDIILPSARRSCCFTRGY 209
Query: 233 YRYVKGTGSLLAT-------------VQPKNKGKASSLK---EQHLRYFTPREVANL-HS 275
R + +GS+L ++ + G+ ++++ LRYF+P E+ + H
Sbjct: 210 VRMAERSGSVLQMNEELDTTSTFDRFLEAQKSGREAAVRVLDPLRLRYFSPTELLRIFHF 269
Query: 276 FPG-------DFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQAG 316
P FQ+P LS++ +Y L+GNS+++ VVA L++YLF G
Sbjct: 270 LPTAKTEAQESFQWPADLSVKTQYRLIGNSVNVQVVAELIRYLFEVEG 317
>gi|328774327|gb|EGF84364.1| hypothetical protein BATDEDRAFT_29368 [Batrachochytrium
dendrobatidis JAM81]
Length = 349
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 156/329 (47%), Gaps = 70/329 (21%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
+ A +LLSPPCQPY+R+G +K +D+RA SF+++L+ I + P + VENV GFETS
Sbjct: 72 FQADMFLLSPPCQPYSRKGSRKGINDSRADSFVQLLDSIKKMQQKPKWMLVENVYGFETS 131
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSP 121
DT + E L +Y Q F L+P FG+PYSRPR F LAK + + +C+
Sbjct: 132 DTFTILKEKLV-GEYDIQSFELNPWHFGIPYSRPRIFILAKLR-VCNQCK---------- 179
Query: 122 SPLLGNDDMTVITKHDQPDDSWDKLLESC-DPVERFLEFSNSGDQVNTETGFLSTGTAAV 180
D + T Q D E C D + L GFL +
Sbjct: 180 ------QDYRLDTDSHQGDH------EKCRDTTPQIL------------AGFLDNPNS-- 213
Query: 181 DDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTG 240
+D E D + HF D+V P+S R CCFTK+Y Y +G G
Sbjct: 214 EDTNPYMLVTEQDLWAAARHF--------------DVVGPESTRSCCFTKAYGSYARGGG 259
Query: 241 SLLAT-----VQPKNKGKAS-----------SLKEQHLRYFTPREVANLHSFPGD-FQFP 283
S+ T ++ +GK+ L E LRYF+ E+ LH FP + +FP
Sbjct: 260 SVRVTKKKPSMEAAREGKSKWWDELSKTRPCPLVELKLRYFSSSEMGRLHGFPKEQLKFP 319
Query: 284 HHLSLRQRYALLGNSLSIAVVAPLLQYLF 312
+ QR+ L+GNSL + +V L++Y+
Sbjct: 320 ESTTQIQRFKLIGNSLHVDIVRMLIEYMM 348
>gi|221039820|dbj|BAH11673.1| unnamed protein product [Homo sapiens]
Length = 306
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/295 (35%), Positives = 156/295 (52%), Gaps = 32/295 (10%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
L+SPPCQP+TR G Q +D+R SFL IL+++P K P + +ENV GFE S T +
Sbjct: 3 LMSPPCQPFTRIGRQGDMTDSRTNSFLYILDILPRLQKLPKYILLENVKGFEVSSTRDLL 62
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRCQ---LLNNQLLRS-- 120
I+ + N + QEF+LSP G+P SR RYF +AK +PL F+ L+ + S
Sbjct: 63 IQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPGQVLMEFPKIESVH 122
Query: 121 PSPLLGNDDMTVITKHDQPDDSWDKLLESC--DPVERFLEFSNSGDQVNTETGFLSTGTA 178
P + + + K+ +P+ S D ++ D + LE + + N + LS
Sbjct: 123 PQKYAMDVENKIQEKNVEPNISLDGSIQCSGKDAILFKLETAEEIHRKNQQDSDLS--VK 180
Query: 179 AVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKG 238
+ DF ++ ++ +L+P + R+ +DIV P +R CFTK Y Y++G
Sbjct: 181 MLKDF--------LEDDTDVNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSYIEG 232
Query: 239 TGSLLAT---VQPKNKGKA---SSLKEQ-------HLRYFTPREVANLHSFPGDF 280
TGS+L T VQ +N K+ S +EQ LRYFTP+E+ANL FP +F
Sbjct: 233 TGSVLQTAEDVQVENIYKSLTNLSQEEQITKLLILKLRYFTPKEIANLLGFPPEF 287
>gi|392596911|gb|EIW86233.1| S-adenosyl-L-methionine-dependent methyltransferase [Coniophora
puteana RWD-64-598 SS2]
Length = 401
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 166/353 (47%), Gaps = 65/353 (18%)
Query: 3 GAHAWLLSPPCQPYT--RQGLQKQSSDARAFSFLKILELIPHTV----KPPHMLFVENVV 56
GA W +SP CQPYT + + D RA SFL +++ + T+ K P L VENV
Sbjct: 67 GADIWFMSPSCQPYTVLNPNRARGALDPRAQSFLHVIDDVLPTLCEEGKQPRYLLVENVA 126
Query: 57 GFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQ 116
GF+ S T +++ L Y T EF+L+P+QFG+P SR RY+ LAK PL F
Sbjct: 127 GFQDSTTRTHLLDTLVRLGYTTSEFLLTPMQFGIPNSRLRYYLLAKASPLKFAGL----- 181
Query: 117 LLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTG 176
P+P L + +D+ ++ S P GD +
Sbjct: 182 ----PAPNLAR----------KRNDAGVEVEASSSPAV-LTYIPGQGDPWIDD----RLS 222
Query: 177 TAAVDD-------FGAAEETVEVDRCVSIDH--FLVPLSLIERWGSAMDIVYPDSKRCCC 227
AAVDD E +D+ ++ + +P ++ +WG DIV P ++R CC
Sbjct: 223 PAAVDDPKVSDSQLPGGELASYLDKLTDNEYETYKIPDKVLSKWGRLFDIVLPSARRTCC 282
Query: 228 FTKSYYRYVKGTGSLLATVQP-------------KNKGKASS---LKEQHLRYFTPREVA 271
FT+ Y + V+ GS+L + + G +S+ L+ LRYFTP E+
Sbjct: 283 FTRGYTQLVERAGSILQMNEEMDTTETFDRFLALQRAGDSSTLDVLRPLRLRYFTPTELL 342
Query: 272 NLHSFPG----------DFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQ 314
L G +F++P ++SL+ +Y L+GNS+++ VV L+ Y++ +
Sbjct: 343 RLFRIIGPRSNDNGEDQEFKWPENISLKTKYRLIGNSVNVEVVRRLIDYMYLE 395
>gi|19112479|ref|NP_595687.1| DNA methyltransferase [Schizosaccharomyces pombe 972h-]
gi|730347|sp|P40999.1|PMT1M_SCHPO RecName: Full=tRNA (cytosine(38)-C(5))-methyltransferase; AltName:
Full=DNA (cytosine-5)-methyltransferase-like protein 2;
Short=Dnmt2; AltName: Full=M.SpomI; AltName:
Full=SpIM.SpoI
gi|563911|emb|CAA57824.1| methyltransferase [Schizosaccharomyces pombe]
gi|5689984|emb|CAB52029.1| DNA methyltransferase homolog [Schizosaccharomyces pombe]
Length = 330
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 145/309 (46%), Gaps = 61/309 (19%)
Query: 7 WLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAK 66
W +SP CQP+TR G +K D R+ +FL IL ++PH P + +ENV GFE S +
Sbjct: 75 WTMSPSCQPFTRIGNRKDILDPRSQAFLNILNVLPHVNNLPEYILIENVQGFEESKAAEE 134
Query: 67 MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLG 126
++L N Y E ILSP QF +P SR R++ LA+ L+F+ +
Sbjct: 135 CRKVLRNCGYNLIEGILSPNQFNIPNSRSRWYGLAR---LNFKGE--------------- 176
Query: 127 NDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAA 186
W S D V +F E + +V +L
Sbjct: 177 ----------------W-----SIDDVFQFSEVAQKEGEVKRIRDYL------------- 202
Query: 187 EETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATV 246
E++R S ++V S++ +WG DIV PDS CCCFT+ Y V+G GS+L
Sbjct: 203 ----EIERDWS--SYMVLESVLNKWGHQFDIVKPDSSSCCCFTRGYTHLVQGAGSILQMS 256
Query: 247 QPKNKGKASSLKEQ--HLRYFTPREVANLHSFPGDFQFPH-HLSLRQRYALLGNSLSIAV 303
+N + LRYFT REVA L FP ++ +++ + Y LLGNS+++ V
Sbjct: 257 DHENTHEQFERNRMALQLRYFTAREVARLMGFPESLEWSKSNVTEKCMYRLLGNSINVKV 316
Query: 304 VAPLLQYLF 312
V+ L+ L
Sbjct: 317 VSYLISLLL 325
>gi|358254165|dbj|GAA54195.1| DNA (cytosine-5-)-methyltransferase, partial [Clonorchis sinensis]
Length = 320
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/344 (31%), Positives = 159/344 (46%), Gaps = 68/344 (19%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
+ A W +SPPCQP+TR G QK D R+ SF +L LI P + +ENV GFE +
Sbjct: 5 FNADMWSMSPPCQPFTRLGNQKHEEDNRSASFFYVLGLI--AAIRPKFILLENVKGFEHT 62
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLL-------- 113
+ + +++L Y Q+F+L+PLQFGVP R RY+ +A S L
Sbjct: 63 EPWCQFLKVLQTCGYRYQQFLLTPLQFGVPNCRLRYYLVASSSSDSACSGLFASHVHDSD 122
Query: 114 --NNQLLRSPS--PLLGNDDMTVITKH----DQPDDSWDKLLESCDPVERFLEFSNSGDQ 165
N L P+ P L + V H +PD+++D L C P+ +L + Q
Sbjct: 123 HANTIHLIPPADLPPLPGCECAVCLGHVSHITKPDENFDDYLPYCRPISDYL----AQQQ 178
Query: 166 VNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRC 225
+++ FL D C ++R+ +DIV P ++
Sbjct: 179 QHSKLDFLD------------------DNC------------LKRYFHVLDIVRPCDRKS 208
Query: 226 CCFTKSYYRYVKGTGSLLA----------------TVQPKNKGKASSLKEQHLRYFTPRE 269
CFTK Y + ++GTGS+L T + + S K LR+F RE
Sbjct: 209 RCFTKGYQKRIEGTGSVLQTATDTLTSEEINAQWITARSDPETLMSLAKRLQLRFFHSRE 268
Query: 270 VANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFA 313
VANL FP + FP ++ +QR LLGNS+++ VVA L+ + F
Sbjct: 269 VANLLCFPQTYNFPEDVTEKQRIRLLGNSVNVLVVAHLIHWAFG 312
>gi|355725970|gb|AES08721.1| tRNA aspartic acid methyltransferase 1 [Mustela putorius furo]
Length = 366
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 116/333 (34%), Positives = 167/333 (50%), Gaps = 64/333 (19%)
Query: 5 HAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTH 64
+ L+SPPCQP+TR LQK P + +ENV GFE S T
Sbjct: 71 NMILMSPPCQPFTR--LQKL----------------------PKYILLENVKGFEVSSTR 106
Query: 65 AKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRC--QLLNN-QLLR 119
+I+ L N + QEF+LSP G+P SR RYF +AK +PL F+ Q+L +
Sbjct: 107 DLLIQTLENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPGQVLTEFPKIE 166
Query: 120 SPSP----LLGNDDMTVITKHDQPDDSWDKLLESCDPVERFL---EFSNSGDQVNTETGF 172
S P + + M K +P+ DK C E L E D+ + +
Sbjct: 167 SEHPERNRIEAENKME--RKKIEPNICSDKS-RPCSGKETILFKLETLEEIDRKHHQDSD 223
Query: 173 LSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSY 232
LS + DF E+ V++++ +FL P SL+ R+ DIV P +R CFTK Y
Sbjct: 224 LSV--QMLKDF--LEDDVDMNQ-----YFLPPKSLL-RYALLFDIVKPTCRRSTCFTKGY 273
Query: 233 YRYVKGTGSLLATVQ--------------PKNKGKASSLKEQHLRYFTPREVANLHSFPG 278
Y++GTGS+L T + P+ + K + L LRYFTP+E+A+L FP
Sbjct: 274 GSYIEGTGSVLQTTEDVQIEDIYKSLTNLPQEE-KITKLLMLKLRYFTPKEIASLLGFPS 332
Query: 279 DFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYL 311
+F FP ++++QRY LLGNSL++ VVA L++ L
Sbjct: 333 EFGFPEKITVKQRYRLLGNSLNVHVVAKLIKIL 365
>gi|219129968|ref|XP_002185148.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403327|gb|EEC43280.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 376
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 103/326 (31%), Positives = 161/326 (49%), Gaps = 47/326 (14%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQK----QSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 57
Y A W++SPPCQP+TRQ + + +R+F L L L + P ++F+ENVVG
Sbjct: 79 YRADIWMMSPPCQPHTRQHSNQDQELEDPRSRSFLHLCDLLLELPSENLPKLIFLENVVG 138
Query: 58 FETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQL 117
FE+S + K IL + Y+ + F L+P Q GVP RPRYFCLA R + Q
Sbjct: 139 FESSQSCRKWNTILQSRQYIIKHFHLNPTQVGVPNDRPRYFCLAVRSTEIHDSNDNDLQF 198
Query: 118 LRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGT 177
+ + D+ IT PD + L +S +V++ FL
Sbjct: 199 HVHAKTKMADSDLRPIT----PDTNLPNL--------NIKGLRDSTVKVSSVAEFLDK-- 244
Query: 178 AAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGS-AMDIVYPDSKRCCCFTKSYYRYV 236
D ++T +P S+++R + DIV P+S R CFT SY ++V
Sbjct: 245 ----DLTEHQKT----------SLRIPQSILQRNAAWCFDIVTPESLRSACFTSSYGKFV 290
Query: 237 KGTGSLLATVQPKNKGKASSLKE--------------QHLRYFTPREVANLHSFPGDFQF 282
KGTGS+L T +++ + ++ ++ +HLRYF+ E+A + FP F F
Sbjct: 291 KGTGSVLYTGPYRDRIRLTNPEDRKFDDAWDQGLDLPKHLRYFSGSELARIFGFPSTFSF 350
Query: 283 PHHLSLRQRYALLGNSLSIAVVAPLL 308
P ++ +Q++ L+GNSL++ V A L+
Sbjct: 351 PETITRKQQWKLIGNSLNVRVAAKLV 376
>gi|409050914|gb|EKM60390.1| hypothetical protein PHACADRAFT_167754 [Phanerochaete carnosa
HHB-10118-sp]
Length = 360
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 108/325 (33%), Positives = 150/325 (46%), Gaps = 61/325 (18%)
Query: 4 AHAWLLSPPCQPYT-RQGLQKQSSDARAFSFLKILE-LIPHTV---KPPHMLFVENVVGF 58
A WLLSP CQPYT L K D RA SF +++ ++P V + P + VENV GF
Sbjct: 80 ADLWLLSPSCQPYTVLNPLAKGPEDPRAKSFAHLIQGVLPELVDMGQQPRYILVENVAGF 139
Query: 59 ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLL 118
E S T E L Y E +L+PLQFG P SR RY+ LAK +PL+FR +L
Sbjct: 140 EASSTR----EQLDARGYNCLELLLTPLQFGTPNSRLRYYLLAKWRPLAFRNAGTPGRLA 195
Query: 119 RSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTA 178
R P G D + D P
Sbjct: 196 RH-IPGQGEDWSDPRSTSDAP--------------------------------------V 216
Query: 179 AVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKG 238
D A E ++ D + + F +P ++E+WG DIV P KR CCFT+ Y + +
Sbjct: 217 LFGDLKALHEYLDPDD--TNEEFKIPDRVLEKWGRLFDIVLPSGKRTCCFTRGYTKLAER 274
Query: 239 TGSLLATVQPKNK-GKASSLK---EQHLRYFTPREVANLHSF-------PGDFQFPHHLS 287
GS+L + +K G A +++ LRYF+P+E+ L F G F +P S
Sbjct: 275 AGSVLQLNEDLDKRGNADTVRLLDPLRLRYFSPQELLRLFCFDPPSSLGAGSFIWPEKTS 334
Query: 288 LRQRYALLGNSLSIAVVAPLLQYLF 312
+ +Y L+GNS+++ VV L+ YLF
Sbjct: 335 TKTKYKLIGNSVNVEVVCRLINYLF 359
>gi|393218987|gb|EJD04475.1| S-adenosyl-L-methionine-dependent methyltransferase [Fomitiporia
mediterranea MF3/22]
Length = 348
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 147/337 (43%), Gaps = 91/337 (27%)
Query: 3 GAHAWLLSPPCQPYTRQG-LQKQSSDARAFSFLKILE-LIPHTVKP---PHMLFVENVVG 57
A WLLSP CQPYT K S D RA SFL +++ +IP + P + VENV G
Sbjct: 69 NAPLWLLSPSCQPYTVLNPSAKGSQDPRAKSFLHLVQQVIPELARIDQCPKWILVENVAG 128
Query: 58 FETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQL 117
FE S T ++E L +Y T E +L+PLQFG+P SR RY+ LAK+ P SF
Sbjct: 129 FEASSTRKILLETLHACNYTTVELLLTPLQFGIPNSRLRYYLLAKQLPSSF--------- 179
Query: 118 LRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGT 177
+D P+D C+ + + D ET
Sbjct: 180 -----------------ANDTPED--------CETTQLRAYLDRAADSAEDETSS----- 209
Query: 178 AAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVK 237
VP ++ RWG DIV P S+R CCFT+ Y + V+
Sbjct: 210 -------------------------VPDRVLLRWGRLFDIVLPSSRRSCCFTRGYTQLVE 244
Query: 238 GTGSLLATVQ---------PKNKGKASSLKEQ-HLRYFTPREVANLHSFPGD-------- 279
GS+L + P N+ ++ E LRYFTP E+ L F
Sbjct: 245 RAGSILQMNEYLDVSPQFSPANRRILLNILEPLRLRYFTPSELLRLFHFESSTDAGIRGN 304
Query: 280 ----FQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 312
F +P ++S + +Y LLGNS+++ VV L+ YLF
Sbjct: 305 KTRAFVWPENVSRKSQYRLLGNSVNVEVVRRLVNYLF 341
>gi|112818953|gb|ABI23560.1| DNA methyltransferase 2 [Artemia franciscana]
Length = 379
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/318 (31%), Positives = 154/318 (48%), Gaps = 42/318 (13%)
Query: 3 GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD 62
+A +SPPCQP+TR G + +D R +F +L+L+P + ++L +ENV GFE+S
Sbjct: 70 NVNAIFMSPPCQPFTRLGKKLDVNDDRCNAFHHVLKLLPRSPNIQYLL-IENVYGFESSK 128
Query: 63 THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPS 122
M+EIL + + T EF+LSP FGVP SR RY+ LA++ C+
Sbjct: 129 MRDTMLEILQSCGFYTIEFLLSPTDFGVPNSRLRYYLLARKNKKFTFCK----------- 177
Query: 123 PLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFL---STGTAA 179
D T I K K L + SN +VNT L + G AA
Sbjct: 178 -----HDHTSIVKEFPYCTCRVKSLNDQASI-----CSNCQREVNTNISSLVQQNAGNAA 227
Query: 180 VDDF-GAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKG 238
+ + +D+ I+ + VP ++ R+G+ +D+ CCFTK Y V+G
Sbjct: 228 QNSLVNPGKLHSYLDKETDIEQYAVPDKILLRYGNILDLRTFQDSSSCCFTKGYTHLVEG 287
Query: 239 TGSLL-----ATVQPKNK-----------GKASSLKEQHLRYFTPREVANLHSFPGDFQF 282
+GS+L T++ K SL++ +RYFTP+EV + FP ++ +
Sbjct: 288 SGSVLVCSRSVTIEEAYKVYNEFKDTDSEAALKSLRKLKIRYFTPKEVERIMCFPDNYTW 347
Query: 283 PHHLSLRQRYALLGNSLS 300
P +S + +Y LLGNS++
Sbjct: 348 PKDISDKTKYKLLGNSVN 365
>gi|328769954|gb|EGF79997.1| hypothetical protein BATDEDRAFT_35320 [Batrachochytrium
dendrobatidis JAM81]
Length = 621
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/327 (30%), Positives = 148/327 (45%), Gaps = 71/327 (21%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
Y A+ WL+SPPCQPYTR G Q DARA FL +L+ + PP +F+ENV FE S
Sbjct: 68 YDANCWLMSPPCQPYTRTGKQLDDKDARAQGFLFLLDTLSQMASPPMYIFIENVANFEQS 127
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSP 121
T K+I+IL+ DY+ QE++L+P+QFG+P RPRY+ A+++
Sbjct: 128 RTRQKLIDILSKLDYIYQEWLLNPVQFGIPNDRPRYYLTARKQ----------------- 170
Query: 122 SPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVD 181
D T+ QP+ + +L S F+ GT V
Sbjct: 171 ------DRTTLPDSLLQPNLFYGRLSRSWMFEPPFV-----------------VGTLTVG 207
Query: 182 DFGAAEETVEVDRCVSIDHFLVPLSLIERWGS--AMDIVYPDSKRCCCFTKSYYRYVKGT 239
+F ++ D + F +P L+ GS + I P R CFTK+Y + +
Sbjct: 208 EF------LQNDILCNDPVFKIPERLLRSRGSFDPLVIAKPSHTRTSCFTKAYGHHGVAS 261
Query: 240 GSLLATV-----QPKNKGKASSLKEQHLRYFTPREVANLHSFPGD--------------- 279
G+ L T + ++ + LR FT E+A LH FP D
Sbjct: 262 GAFLQTRGFDQDESVLLNTHEAVDKLGLRLFTSIEIARLHGFPIDLKAPQSPHINLSGTH 321
Query: 280 ---FQFPHHLSLRQRYALLGNSLSIAV 303
F FP +S RQ++ +LGNS+ + V
Sbjct: 322 LHLFSFPKDISTRQQWRVLGNSMCVIV 348
>gi|170063953|ref|XP_001867327.1| DNA (cytosine-5)-methyltransferase [Culex quinquefasciatus]
gi|167881402|gb|EDS44785.1| DNA (cytosine-5)-methyltransferase [Culex quinquefasciatus]
Length = 345
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 100/325 (30%), Positives = 149/325 (45%), Gaps = 77/325 (23%)
Query: 3 GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFV--ENVVGFET 60
GA+ L+SPPCQP+TR G K D RA F+ + +L+ K P + FV ENV GFE
Sbjct: 81 GANVILMSPPCQPFTRNGHFKDVEDRRADPFVHLCDLLD---KIPQVRFVLLENVKGFER 137
Query: 61 SDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRS 120
S + L + + +EFILSP +GVP +R RY+C+AKR P
Sbjct: 138 SQACEQYKVRLTAAGFFFREFILSPHNYGVPNTRHRYYCVAKRTPFE------------- 184
Query: 121 PSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAV 180
G ++ H++ S + E +P + GD +N
Sbjct: 185 -----GPTQEIIVKPHNKHVKSLKSIGEIVEP--------DDGDHLN------------- 218
Query: 181 DDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTG 240
+L+ L+ + + MD+ PDS+ CFTK+Y Y +GTG
Sbjct: 219 -------------------RYLLKPDLLRKRLAIMDVCTPDSRNSMCFTKAYTHYAEGTG 259
Query: 241 SLLATVQPKN-------KGKASSLKEQ-------HLRYFTPREVANLHSFPGDFQFPHHL 286
S+ + + ++ G A +EQ +RYFTP+EVA L SFP F FP
Sbjct: 260 SVYSPLAREDFDRIYAQIGLAEDAEEQDRLRASLKVRYFTPKEVARLMSFPEGFGFPKGT 319
Query: 287 SLRQRYALLGNSLSIAVVAPLLQYL 311
+ +Q Y +LGNS+++ VV+ L +
Sbjct: 320 TDKQCYRVLGNSINVLVVSSLFDEM 344
>gi|299755231|ref|XP_001828513.2| DNA methyltransferase ZMET4 [Coprinopsis cinerea okayama7#130]
gi|298411129|gb|EAU93300.2| DNA methyltransferase ZMET4 [Coprinopsis cinerea okayama7#130]
Length = 330
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 107/336 (31%), Positives = 162/336 (48%), Gaps = 57/336 (16%)
Query: 7 WLLSPPCQPYTRQGLQKQSS-DARAFSFLKILELIPHTVKP----PHMLFVENVVGFETS 61
WLLSP CQPYT Q + D RA S+L +L + ++ P + VENV GFE S
Sbjct: 23 WLLSPACQPYTVLNPNAQGAEDPRAQSYLHLLRNVLPGLEERGCLPGYVLVENVAGFEGS 82
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSP 121
T +E+L Y QE +L+PLQFG+P SR RY+ LA+R R L ++
Sbjct: 83 TTRQLQLEVLKELGYHIQELLLTPLQFGIPNSRLRYYMLARRGKDFSRPGLGSSS---GD 139
Query: 122 SPLLGNDDMTVITKHDQPDDSWDKLLESC--DPVERFLEFSNSGDQVNTETGFLSTGTAA 179
P + ++V+ DQ D+ ++L P E E V G+L
Sbjct: 140 GPRGEEEGVSVL---DQGDEEEYRVLRHIPGQPAEWREE------DVEELRGYL------ 184
Query: 180 VDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGT 239
D+ + EE+ E F V ++ +WG DIV P +R CCFT+ Y V+ +
Sbjct: 185 -DEETSLEESNE---------FAVSDKVLSKWGRLFDIVLPSGRRSCCFTRGYTHLVERS 234
Query: 240 GSLLAT-------------VQPKNKGKASSLKEQH---LRYFTPREVANLHSFPGD---- 279
GS+L +Q +G A ++K + LRYF+P E+ + +F G
Sbjct: 235 GSILQMAEDLDTTQTFDKFLQETREGNADAVKILYPLRLRYFSPSELLRIFAFEGKGGDG 294
Query: 280 --FQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFA 313
F +P +S + +Y L+GNS+++ VV L++YL +
Sbjct: 295 QGFVWPTGVSTKSKYKLIGNSVNVRVVEELIRYLLS 330
>gi|308805851|ref|XP_003080237.1| putative DNA methyltransferase (ISS) [Ostreococcus tauri]
gi|116058697|emb|CAL54404.1| putative DNA methyltransferase (ISS) [Ostreococcus tauri]
Length = 382
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 148/329 (44%), Gaps = 66/329 (20%)
Query: 5 HAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTH 64
+A SPPCQPYTR+GL S D RA SF +++ IP+ PP +FVENV GFE+SDT
Sbjct: 102 YALTASPPCQPYTRRGLGLASEDPRAKSFHAVIDAIPNLSNPPRWVFVENVRGFESSDTR 161
Query: 65 AKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPL 124
+++ L+ DY +EFI+ P GVP +R RY+ +A R P F
Sbjct: 162 RALLDALSERDYDIREFIVDPTALGVPNTRERYYLIATRSPGGF---------------- 205
Query: 125 LGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFG 184
+P +W + G ++ F+ + +
Sbjct: 206 ------------SEPTPTWLR-----------------GRAIDAAGQFVGEASTSQSTTS 236
Query: 185 AAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLA 244
+ + + C + D ++ +I ++ +D+V P SKRC FT Y V G GS+L
Sbjct: 237 TLADYIRTE-CDNEDELVLGSEMIRKYWRVLDVVTPTSKRCSTFTSGYADTVFG-GSVLL 294
Query: 245 TVQPKNKG-----------KASSLKEQ-------HLRYFTPREVANLHSFPGDFQFPHHL 286
+ +G S + E+ +LR+F E+ LH DF F +
Sbjct: 295 RSRGVQRGLDELLELDADSGVSRINERDVEHFIDNLRWFHVDEIKALHGVRDDFTF-NAC 353
Query: 287 SLRQRYALLGNSLSIAVVAPLLQYLFAQA 315
S ++ LLGNS+S+ VV +L +LF+
Sbjct: 354 SRKKAIFLLGNSISVHVVREVLLHLFSAG 382
>gi|56385094|gb|AAV85978.1| 5' cytosine DNA methyl transferase-like protein [Pristionchus
pacificus]
Length = 313
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/313 (30%), Positives = 145/313 (46%), Gaps = 78/313 (24%)
Query: 3 GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD 62
GA W +SPPCQP+T +G +K D R SF K+L + P +F+ENV F ++
Sbjct: 75 GAELWTMSPPCQPFTLKGNRKGDDDPRCDSFKKLLHCLNKMSNRPRWIFIENVSAFHSTS 134
Query: 63 THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPS 122
H+ +IE L Y +E++LSP+Q G+P SRPRY+ LA L+ P
Sbjct: 135 MHSTLIETLNTIGYRIEEYMLSPVQLGIPNSRPRYYLLA--------------SLMEGP- 179
Query: 123 PLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQV--NTETGFLSTGTAAV 180
+ N+ ++ L + D VE E S + + N +T +LS+
Sbjct: 180 --VHNEYVS-------------HLYQYIDGVEE-CEMSTVREYLSDNVDTAYLSSDKVDA 223
Query: 181 DDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTG 240
++ LS++E P S CFTKSY +++ G G
Sbjct: 224 NN----------------------LSIVE----------PSSISSSCFTKSYTQFLVGCG 251
Query: 241 SLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLS 300
S L T +R F+PREVA+L SFP F +PH ++ +Q Y LGNS++
Sbjct: 252 SYLRTCSG-------------IRPFSPREVASLMSFPNSFSWPHQITQKQVYRALGNSVN 298
Query: 301 IAVVAPLLQYLFA 313
+ VV+ LL+ L
Sbjct: 299 VLVVSKLLERLLT 311
>gi|339776691|gb|AEK05285.1| DNA-methyltransferase 2 isoform 2 [Schistosoma mansoni]
Length = 360
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 163/337 (48%), Gaps = 69/337 (20%)
Query: 3 GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD 62
A+ W L PPCQP+TR G + +D R+ SF +L+LI ++ P + +ENV GFE S+
Sbjct: 66 NANVWSLCPPCQPFTRLGKRMCEADNRSSSFFHVLDLI--SILKPAGIILENVKGFEHSE 123
Query: 63 THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQL----L 118
++IE+L + DY +FG+P R R++ LA+ + S+ + L
Sbjct: 124 PWRRLIEVLNSCDY--------EYRFGIPNCRLRFYLLARLRSSSWNSNFKMGKSESIDL 175
Query: 119 RSP--SPLLGNDDMT----VITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGF 172
R P +P+L T VI+ + DD++ + ++ C P+ FL + + E F
Sbjct: 176 RPPIDAPMLPGCQCTSCSGVISHIEHTDDNFTEYIQFCRPISEFLLVPSDSSK---ELYF 232
Query: 173 LSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSY 232
L ++C ++R+ +DIV K+ CFTK Y
Sbjct: 233 LD------------------EKC------------LQRYFRVLDIVRSCDKKTRCFTKGY 262
Query: 233 YRYVKGTGSLLAT-VQPKNKGKASSLKEQH---------------LRYFTPREVANLHSF 276
+ ++GTGS+ T ++ + K ++ E + LR+F REVAN+ F
Sbjct: 263 SKRLEGTGSVFQTSMENETSEKITNFYEANKEDEQAVLQYAKLLKLRFFHSREVANMMCF 322
Query: 277 PGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFA 313
P F FP H++ +QR LLGNS++I VV+ L+ + F
Sbjct: 323 PKSFDFPEHITEKQRLRLLGNSVNILVVSHLIYWAFG 359
>gi|357620806|gb|EHJ72855.1| DNA cytosine-5 methyltransferase [Danaus plexippus]
Length = 318
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/325 (30%), Positives = 150/325 (46%), Gaps = 76/325 (23%)
Query: 3 GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD 62
+ L+SPPCQP+TR G +D R SF +++L ++L +ENV GFE S
Sbjct: 54 NVNTILMSPPCQPFTRNGKFLDENDPRTNSFTYLIDLFDELDNIEYIL-MENVKGFECST 112
Query: 63 THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPS 122
I L +++ QEF+L P GVP SR RY+C+A++ L + S
Sbjct: 113 VRNLFINKLKKCNFVYQEFLLCPTSVGVPNSRLRYYCIARKNTLDW-------------S 159
Query: 123 PLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDD 182
+ ++ +T +TK + + +LE+ P E++L +N
Sbjct: 160 FIRTDEIITKLTKDYGEPHTLEAILETNVP-EKYLLTNN--------------------- 197
Query: 183 FGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSL 242
FL + +DI Y SKR CCFTKSY YV+GTGS+
Sbjct: 198 ------------------FL-------KRAYLLDICYKHSKRSCCFTKSYTHYVEGTGSV 232
Query: 243 LATVQP-------KNKGKASSLKEQH--------LRYFTPREVANLHSFPGDFQFPHHLS 287
P K+ + KE++ LR+FTP+EV L FP ++FP +
Sbjct: 233 YTDSTPDEVENCIKDAKQYEVGKEEYVDRFQQLKLRFFTPKEVLALMMFPKSYKFPERTT 292
Query: 288 LRQRYALLGNSLSIAVVAPLLQYLF 312
+Q Y LLGNS+++ V++ LL+ LF
Sbjct: 293 TKQCYRLLGNSVNVKVISELLKILF 317
>gi|444302579|gb|AGD99088.1| DNA methyltransferase 2, partial [Quercus suber]
Length = 78
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 67/78 (85%), Positives = 71/78 (91%)
Query: 232 YYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQR 291
YYRYVKGTGSLLATVQPK KGK+S LKEQ LR+FTPREVANLHSFP DF FP +SLRQR
Sbjct: 1 YYRYVKGTGSLLATVQPKKKGKSSPLKEQCLRFFTPREVANLHSFPEDFHFPQQISLRQR 60
Query: 292 YALLGNSLSIAVVAPLLQ 309
YALLGNSLSIAVVAPLL+
Sbjct: 61 YALLGNSLSIAVVAPLLR 78
>gi|302673748|ref|XP_003026560.1| hypothetical protein SCHCODRAFT_62152 [Schizophyllum commune H4-8]
gi|300100243|gb|EFI91657.1| hypothetical protein SCHCODRAFT_62152 [Schizophyllum commune H4-8]
Length = 345
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/320 (30%), Positives = 148/320 (46%), Gaps = 78/320 (24%)
Query: 7 WLLSPPCQPYTRQGLQ-KQSSDARAFSFLKILELI-PHTVK---PPHMLFVENVVGFETS 61
WLLSP CQPYT K + D RA SFL +++++ P + P L VENV GFE S
Sbjct: 91 WLLSPACQPYTVLNPNGKGAQDPRAQSFLHLVQVVLPDLAREGAAPRYLLVENVAGFEQS 150
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSP 121
T + IL + Y EF+L+PLQFG+P SR RY+ LA+ R P
Sbjct: 151 TTRQLTLSILQSMGYHCAEFLLTPLQFGIPNSRLRYYLLAR----------------RDP 194
Query: 122 SPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVD 181
P + + +S V R++ SG ++
Sbjct: 195 FPSISS--------------------KSAASVLRYIPGHGSGPWIDPPA----------- 223
Query: 182 DFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGS 241
+ +P ++ +WG DIVYP +R CCFT+ Y + V+ GS
Sbjct: 224 ------------------KYTIPDKVLVKWGWLFDIVYPSDRRTCCFTRGYTKLVERAGS 265
Query: 242 LLATVQPKNKGKASS---LKEQHLRYFTPREVANLHSF--PG---DFQFPHHLSLRQRYA 293
+L + + + L+ LRYFTP+E+ L F PG +++P+++S + +Y
Sbjct: 266 ILQMNEDMDTNPTQALQILRPLRLRYFTPQELLCLFGFNDPGLQVAYKWPYNISEKTKYR 325
Query: 294 LLGNSLSIAVVAPLLQYLFA 313
L+GNS++I VV L+ YL +
Sbjct: 326 LIGNSVNIHVVTNLVNYLVS 345
>gi|198475758|ref|XP_001357145.2| Mt2 [Drosophila pseudoobscura pseudoobscura]
gi|198137946|gb|EAL34212.2| Mt2 [Drosophila pseudoobscura pseudoobscura]
Length = 347
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/318 (31%), Positives = 148/318 (46%), Gaps = 47/318 (14%)
Query: 3 GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD 62
GA L+SPPCQP+TRQGLQ+ + D R+ + + LIP ++L +ENV GFE S
Sbjct: 67 GATMLLMSPPCQPHTRQGLQRDTEDKRSDALTHLCTLIPQCETLQYIL-MENVKGFECSQ 125
Query: 63 THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR-KPLSFRCQLLNNQLLRSP 121
+ +E L + + +EFIL+P QF VP +R RY+C+A++ K +F + ++ SP
Sbjct: 126 ARNQFVEALEKAGFYWREFILTPTQFNVPNTRYRYYCIARKTKDFAFAGGKIWEEMPESP 185
Query: 122 SPLLGNDDMTVITKHD------QPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLST 175
S ++ I + + PDD K + D + N F
Sbjct: 186 STEQSVSQISAILEDNVSCEYLVPDDVLTKRVLVMDIIH---------PTQNRSMCFTKG 236
Query: 176 GTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRY 235
T + G+A PLS E S R K
Sbjct: 237 YTHYTEGTGSA---------------FTPLSKEE------------SHRIFELVKEIDNN 269
Query: 236 VKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALL 295
+ T S V+ + + L++ LRYFTPREVA L SFP +F FP + RQ+Y LL
Sbjct: 270 NQDTSSSSEDVRQR---RLDLLRQIKLRYFTPREVARLMSFPEEFAFPPETTNRQKYRLL 326
Query: 296 GNSLSIAVVAPLLQYLFA 313
GNS+++ VV L++ L A
Sbjct: 327 GNSINVKVVGELIKLLIA 344
>gi|194386588|dbj|BAG61104.1| unnamed protein product [Homo sapiens]
Length = 310
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 101/315 (32%), Positives = 160/315 (50%), Gaps = 54/315 (17%)
Query: 20 GLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEILANSDYLTQ 79
G Q +D+R SFL IL+++P + +I+ + N + Q
Sbjct: 27 GRQGDMTDSRTNSFLHILDILPRDL----------------------LIQTIENCGFQYQ 64
Query: 80 EFILSPLQFGVPYSRPRYFCLAK--RKPLSFRC---QLLNNQLLRS--PSPLLGNDDMTV 132
EF+LSP G+P SR RYF +AK +PL F+ L+ + S P + + +
Sbjct: 65 EFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPGQVLMEFPKIESVHPQKYAMDVENKI 124
Query: 133 ITKHDQPDDSWDKLLESC--DPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAEETV 190
K+ +P+ S+D ++ D + LE + + N + LS + DF
Sbjct: 125 QEKNVEPNISFDGSIQCSGKDAILFKLETAEEIHRKNQQDSDLSV--KMLKDF------- 175
Query: 191 EVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLAT---VQ 247
++ ++ +L+P + R+ +DIV P +R CFTK Y Y++GTGS+L T VQ
Sbjct: 176 -LEDDTDVNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSYIEGTGSVLQTAEDVQ 234
Query: 248 PKNKGKAS---SLKEQ-------HLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGN 297
+N K+ S +EQ LRYFTP+E+ANL FP +F FP ++++QRY LLGN
Sbjct: 235 VENIYKSLTNLSQEEQITKLLVLKLRYFTPKEIANLLGFPPEFGFPEKITVKQRYRLLGN 294
Query: 298 SLSIAVVAPLLQYLF 312
SL++ VVA L++ L+
Sbjct: 295 SLNVHVVAKLIKILY 309
>gi|195160038|ref|XP_002020883.1| GL16217 [Drosophila persimilis]
gi|194117833|gb|EDW39876.1| GL16217 [Drosophila persimilis]
Length = 347
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 100/318 (31%), Positives = 148/318 (46%), Gaps = 47/318 (14%)
Query: 3 GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD 62
GA L+SPPCQP+TRQGLQ+ + D R+ + + LIP ++L +ENV GFE S
Sbjct: 67 GATMLLMSPPCQPHTRQGLQRDTEDKRSDALTHLCTLIPQCETLQYIL-MENVKGFECSQ 125
Query: 63 THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR-KPLSFRCQLLNNQLLRSP 121
+ +E L + + +EFIL+P QF VP +R RY+C+A++ + +F + ++ SP
Sbjct: 126 ARNQFVEALEKAGFYWREFILTPTQFNVPNTRYRYYCIARKTEDFAFAGGKIWEEMPESP 185
Query: 122 SPLLGNDDMTVITKHD------QPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLST 175
S ++ I + + PDD K + D + N F
Sbjct: 186 STEQSVSQISAILEDNVSCEYLVPDDVLTKRVLVMDIIH---------PTQNRSMCFTKG 236
Query: 176 GTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRY 235
T + G+A PLS E S R K
Sbjct: 237 YTHYTEGTGSA---------------FTPLSKEE------------SHRIFELVKEMDNN 269
Query: 236 VKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALL 295
+ T S V+ + + L++ LRYFTPREVA L SFP +F FP + RQ+Y LL
Sbjct: 270 NQDTSSSSEDVRQR---RLDLLRQIKLRYFTPREVARLMSFPEEFAFPPETTNRQKYRLL 326
Query: 296 GNSLSIAVVAPLLQYLFA 313
GNS+++ VV L++ L A
Sbjct: 327 GNSINVKVVGELIKLLIA 344
>gi|414145788|pdb|4H0N|A Chain A, Crystal Structure Of Spodoptera Frugiperda Dnmt2
E260a/e261a/k263a Mutant
gi|414145789|pdb|4H0N|B Chain B, Crystal Structure Of Spodoptera Frugiperda Dnmt2
E260a/e261a/k263a Mutant
gi|414145790|pdb|4H0N|C Chain C, Crystal Structure Of Spodoptera Frugiperda Dnmt2
E260a/e261a/k263a Mutant
gi|414145791|pdb|4H0N|D Chain D, Crystal Structure Of Spodoptera Frugiperda Dnmt2
E260a/e261a/k263a Mutant
Length = 333
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 142/329 (43%), Gaps = 82/329 (24%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
+ L+SPPCQP+TR G +D R SFL ++ ++ ++L +ENV GFE S
Sbjct: 68 WNVDTILMSPPCQPFTRNGKYLDDNDPRTNSFLYLIGILDQLDNVDYIL-MENVKGFENS 126
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSP 121
I+ L +++ QEF+L P GVP SR L + C N L
Sbjct: 127 TVRNLFIDKLKECNFIYQEFLLCPSTVGVPNSR-----------LRYYCTARRNNL---- 171
Query: 122 SPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVD 181
+W P +R E T
Sbjct: 172 --------------------TW--------PFKRRDEII----------------TRLPK 187
Query: 182 DFG---AAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKG 238
DFG + E +E D + FLVP ++ R DI Y SKR CCFTK+Y Y G
Sbjct: 188 DFGVPHSLESIIEED---VDEKFLVPEKML-RCAKVFDICYKTSKRSCCFTKAYTHYADG 243
Query: 239 TGSLL-------------ATVQPKNKGK--ASSLKEQHLRYFTPREVANLHSFPGDFQFP 283
TGS+ A Q + G+ KE LRYFTP+EV + FP + P
Sbjct: 244 TGSIFTDKPREVVQKCYAAAAQNEIGGEKFVELFKELKLRYFTPKEVLMIMCFPKSYNLP 303
Query: 284 HHLSLRQRYALLGNSLSIAVVAPLLQYLF 312
++S++Q Y LLGNS+++ V++ LL+ LF
Sbjct: 304 TNISMKQCYRLLGNSVNVKVISELLKILF 332
>gi|406868804|gb|AFS64716.1| DNA methyltransferase-2 [Spodoptera frugiperda]
Length = 332
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 145/330 (43%), Gaps = 84/330 (25%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
+ L+SPPCQP+TR G +D R SFL ++ ++ ++L +ENV GFE S
Sbjct: 67 WNVDTILMSPPCQPFTRNGKYLDDNDPRTNSFLYLIGILDQLDNVDYIL-MENVKGFENS 125
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSP 121
I+ L +++ QEF+L P GVP SR L + C N L
Sbjct: 126 TVRNLFIDKLKECNFIYQEFLLCPSTVGVPNSR-----------LRYYCTARRNNL---- 170
Query: 122 SPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVD 181
+W P +R E T
Sbjct: 171 --------------------TW--------PFKRRDEII----------------TRLPK 186
Query: 182 DFG---AAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKG 238
DFG + E +E D + FLVP ++ R DI Y SKR CCFTK+Y Y G
Sbjct: 187 DFGVPHSLESIIEED---VDEKFLVPEKML-RCAKVFDICYKTSKRSCCFTKAYTHYADG 242
Query: 239 TGSLLATVQPKN-------KGKASSL---------KEQHLRYFTPREVANLHSFPGDFQF 282
TGS+ T +P+ + K + + KE LRYFTP+EV + FP +
Sbjct: 243 TGSIF-TDKPREVVQKCYEEAKQNEIGGEKFVELFKELKLRYFTPKEVLMIMCFPKSYNL 301
Query: 283 PHHLSLRQRYALLGNSLSIAVVAPLLQYLF 312
P ++S++Q Y LLGNS+++ V++ LL+ LF
Sbjct: 302 PTNISMKQCYRLLGNSVNVKVISELLKILF 331
>gi|145348417|ref|XP_001418645.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578875|gb|ABO96938.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 398
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 140/324 (43%), Gaps = 69/324 (21%)
Query: 9 LSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMI 68
+SPPCQPYTR+G S D RA SF +++ + P +FVENVVGFE+SDT ++
Sbjct: 121 VSPPCQPYTRRGKGLASEDPRARSFHAVIDQLRAIEHVPRRIFVENVVGFESSDTRRALL 180
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLG-- 126
L + Y +EFI+SP+ G+PYSR RY+ +A + FR +P+ L G
Sbjct: 181 NALGSRRYDVREFIVSPMALGIPYSRSRYYLIATLREGGFRAP--------TPAWLAGRE 232
Query: 127 -NDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGA 185
NDD +V+T Q S L
Sbjct: 233 LNDDGSVVTSDAQSSPSSSATL-------------------------------------- 254
Query: 186 AEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLA- 244
E + D +D L P I+++ +D+V+ S+RC FT Y V G +L
Sbjct: 255 -SEYIVADADGRVDLLLSP-DTIKKYRRMLDVVHAKSRRCSTFTSGYGSTVFGGSVVLRG 312
Query: 245 ---------TVQPKNKGKASSLKEQ-------HLRYFTPREVANLHSFPGDFQFPHHLSL 288
V + + E+ LR+F E+ LH DF F S
Sbjct: 313 GNDELVSMLEVDVNETSGVARISERDIERFVGELRWFAVEEIKRLHGVRRDFTF-DACST 371
Query: 289 RQRYALLGNSLSIAVVAPLLQYLF 312
++ LLGNS+S+ VV +L++L
Sbjct: 372 KKAIFLLGNSISVDVVREVLRHLI 395
>gi|345309099|ref|XP_001520279.2| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase-like, partial
[Ornithorhynchus anatinus]
Length = 264
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 125/258 (48%), Gaps = 26/258 (10%)
Query: 6 AWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHA 65
L+SPPCQP+TR GL+ ++D R SFL +L ++P KPP + +ENV GFE S T
Sbjct: 14 VMLMSPPCQPFTRTGLRGDAADGRTNSFLYLLRILPRLRKPPRYILLENVKGFEGSATRD 73
Query: 66 KMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLL 125
+++ + + QEF+LSP G+P SR RYF +AK + F Q+ L P P
Sbjct: 74 LLVQTIEKCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSSPFPFQVRGQILTEFPEPGS 133
Query: 126 GNDDMTVIT------KHDQP--DDSWDKLLESCDPVER--------FLEFSNSGDQVNTE 169
GN + + +P +++ + S D R LE + +
Sbjct: 134 GNSPRREVAVAGGSERAAEPGKEENTEPRCRSADGTPRPGREAVLFKLETAEEMQRKRQR 193
Query: 170 TGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFT 229
G LS G EE R +FL P L+ R+G +D+V P +R CFT
Sbjct: 194 DGDLSVEMLR----GFLEEDSGPSR-----YFLPPKPLL-RYGLLLDVVKPTCRRSTCFT 243
Query: 230 KSYYRYVKGTGSLLATVQ 247
K Y YV+GTGS+L T +
Sbjct: 244 KGYGSYVEGTGSVLQTAE 261
>gi|347971242|ref|XP_312975.5| AGAP004101-PA [Anopheles gambiae str. PEST]
gi|333468578|gb|EAA08679.5| AGAP004101-PA [Anopheles gambiae str. PEST]
Length = 339
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/323 (32%), Positives = 141/323 (43%), Gaps = 81/323 (25%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFV--ENVVGFETSDTHA 65
L+SPPCQP+TR G +D R+ FL I EL+ K P + F+ ENV GFE S
Sbjct: 79 LMSPPCQPFTRNGKFNDINDRRSDPFLHICELLD---KMPLVEFILMENVKGFENSQACE 135
Query: 66 KMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLL 125
L + + Q++ILSP QFGVP +R RY+C
Sbjct: 136 MYKARLREAGFHYQQYILSPHQFGVPNTRHRYYC-------------------------- 169
Query: 126 GNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSG-DQVNTETG-FLSTGTAAVDDF 183
I K D W E + S +G T G + T A+ +
Sbjct: 170 -------IAKRHGADFKWKS--------EEIITTSQAGYGAKQTLVGTIVDTQQDALGQY 214
Query: 184 GAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGS-- 241
G T+ + H +PL MD+ P+S CFTK+Y Y +GTGS
Sbjct: 215 GLKSATL-------LKH--LPL---------MDVCTPESTNSMCFTKAYTHYAEGTGSVY 256
Query: 242 -------------LLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSL 288
L + K S L+E +RYFTP+EVA L SFP F FP ++
Sbjct: 257 CPLSRQEFDKTYALAMGAEEDEDRKLSVLRELRVRYFTPKEVARLMSFPEHFSFPDTVTN 316
Query: 289 RQRYALLGNSLSIAVVAPLLQYL 311
+QRY +LGNS+++ VV+ LL L
Sbjct: 317 KQRYRVLGNSINVFVVSVLLHEL 339
>gi|157112484|ref|XP_001657555.1| DNA (cytosine-5)-methyltransferase [Aedes aegypti]
gi|108878059|gb|EAT42284.1| AAEL006166-PA [Aedes aegypti]
Length = 344
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 139/324 (42%), Gaps = 76/324 (23%)
Query: 3 GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD 62
G + L+SPPCQP++R G K D RA F+ + +L+ + + +ENV GFE S
Sbjct: 80 GVNVILMSPPCQPFSRNGNFKDVDDRRADPFVHLCDLL-DKIPTVQFILLENVKGFERSQ 138
Query: 63 THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPS 122
L+ + + +E+ILSP FGVP +R RY+C
Sbjct: 139 ACELYKTRLSAAGFRFKEYILSPHDFGVPNTRHRYYC----------------------- 175
Query: 123 PLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAA-VD 181
V + EF N D++ ++ GTA +
Sbjct: 176 ------------------------------VAKRTEFRNPSDEIVSKPTLQHVGTAKRIC 205
Query: 182 DFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGS 241
D E ++ +L+ L+ + + MDI PDS CFTK+Y Y +GTGS
Sbjct: 206 DLVEPESE-------KLNRYLLKDDLLRKRLAIMDICTPDSTNSMCFTKAYTHYAEGTGS 258
Query: 242 LLATVQ--------------PKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLS 287
+ + + + K L+ +RYFTP EVA L FP DF+FP +
Sbjct: 259 VYSPLMRSEFDAIYKQIETTDDDDEKLKLLRSLRVRYFTPAEVAKLMCFPDDFEFPKQTT 318
Query: 288 LRQRYALLGNSLSIAVVAPLLQYL 311
+Q Y +LGNS+++ VV+ L +
Sbjct: 319 DKQCYRVLGNSINVLVVSSLFDEM 342
>gi|119606625|gb|EAW86219.1| hCG23994, isoform CRA_c [Homo sapiens]
gi|167887562|gb|ACA05986.1| tRNA aspartic acid methyltransferase 1 variant 1 [Homo sapiens]
Length = 345
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/272 (33%), Positives = 145/272 (53%), Gaps = 32/272 (11%)
Query: 63 THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRCQ---LLNNQL 117
T +I+ + N + QEF+LSP G+P SR RYF +AK +PL F+ L+
Sbjct: 83 TRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPGQVLMEFPK 142
Query: 118 LRS--PSPLLGNDDMTVITKHDQPDDSWDKLLESC--DPVERFLEFSNSGDQVNTETGFL 173
+ S P + + + K+ +P+ S+D ++ D + LE + + N + L
Sbjct: 143 IESVHPQKYAMDVENKIQEKNVEPNISFDGSIQCSGKDAILFKLETAEEIHRKNQQDSDL 202
Query: 174 STGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYY 233
S + DF ++ ++ +L+P + R+ +DIV P +R CFTK Y
Sbjct: 203 SV--KMLKDF--------LEDDTDVNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYG 252
Query: 234 RYVKGTGSLLAT---VQPKNKGKAS---SLKEQ-------HLRYFTPREVANLHSFPGDF 280
Y++GTGS+L T VQ +N K+ S +EQ LRYFTP+E+ANL FP +F
Sbjct: 253 SYIEGTGSVLQTAEDVQVENIYKSLTNLSQEEQITKLLILKLRYFTPKEIANLLGFPPEF 312
Query: 281 QFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 312
FP ++++QRY LLGNSL++ VVA L++ L+
Sbjct: 313 GFPEKITVKQRYRLLGNSLNVHVVAKLIKILY 344
>gi|326428358|gb|EGD73928.1| hypothetical protein PTSG_05624 [Salpingoeca sp. ATCC 50818]
Length = 512
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 87/241 (36%), Positives = 116/241 (48%), Gaps = 24/241 (9%)
Query: 4 AHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDT 63
A +L+SPPCQP+TR G Q+ D R+ S IL+LI PP + VENV GFE+S+
Sbjct: 85 ADMYLMSPPCQPFTRTGKQQGIEDKRSTSLRFILDLITTMKTPPRYILVENVKGFESSNA 144
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSP 123
+I L + DY QEFILSP QFG+P SR RYF +A R PL PSP
Sbjct: 145 RQPLISALQSRDYSFQEFILSPDQFGIPNSRLRYFLVAVRAPLQL------------PSP 192
Query: 124 LLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFS-NSGDQVNTETGFLSTGTAAVDD 182
G + T D + + + FL + V + AV
Sbjct: 193 PTGTVLYHIPTLGGAFADGYSPQIAA----HSFLPPAPQQVPGVPPVRPWTLRPVRAVGA 248
Query: 183 FGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSL 242
+ +A+E I LVP+ ++ R G DIV S R CFTK+Y Y +GTGS+
Sbjct: 249 YLSADEG-------EIAANLVPMKVVLRHGQLFDIVDATSHRTMCFTKAYSHYAEGTGSV 301
Query: 243 L 243
+
Sbjct: 302 V 302
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%)
Query: 254 ASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFA 313
+ +L LR+FTPRE+ +H F + P ++ +Q +GN L++ VVA L++++ A
Sbjct: 448 SEALGALRLRWFTPREMLTIHGFADTYTVPADVTAKQMRRCIGNGLNVVVVAELIKFMLA 507
>gi|255072031|ref|XP_002499690.1| DNA methyltransferase [Micromonas sp. RCC299]
gi|226514952|gb|ACO60948.1| DNA methyltransferase [Micromonas sp. RCC299]
Length = 401
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 71/106 (66%)
Query: 3 GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD 62
GA W LSPPCQPYTR+G + D RA SF +ILE +P PP + VENVVGFE+S+
Sbjct: 136 GADVWTLSPPCQPYTRKGKRLHGEDPRAGSFARILEALPKLRAPPERILVENVVGFESSE 195
Query: 63 THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 108
T ++ L + Y+ +E+ SP+ GVP +R RY+ LAKRKPLSF
Sbjct: 196 TRRALVAALDEAGYVWREYHASPVDIGVPCTRTRYYALAKRKPLSF 241
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 66/136 (48%), Gaps = 16/136 (11%)
Query: 192 VDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLA------- 244
++R V V +ER+ +D+V P RC FT Y + V G GS+LA
Sbjct: 265 LERPVHDADLAVEAGTVERYWRWLDVVSPSCVRCSTFTSGYGKTVYG-GSVLASDAFVAE 323
Query: 245 -------TVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFP-HHLSLRQRYALLG 296
T + + G +RYF+PRE+ANLH ++ P L+ RQ + +G
Sbjct: 324 HCDVDAGTGRARLVGPFKGEWAGEMRYFSPREMANLHGLDAGWRLPSRELTRRQLWFTVG 383
Query: 297 NSLSIAVVAPLLQYLF 312
NS+S+ VVA L++ L
Sbjct: 384 NSISVDVVAALMRQLM 399
>gi|392572088|gb|EIW65260.1| S-adenosyl-L-methionine-dependent methyltransferase [Trametes
versicolor FP-101664 SS1]
Length = 368
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 153/338 (45%), Gaps = 68/338 (20%)
Query: 4 AHAWLLSPPCQPYTRQG-LQKQSSDARAFSFLKILE-LIPHTV---KPPHMLFVENVVGF 58
A WLLSP CQPYT L K + D RA SF++++E ++P V K P L VENV GF
Sbjct: 69 ADLWLLSPSCQPYTVLNPLAKGAEDPRAKSFIRLMESVLPELVRLRKHPQKLLVENVAGF 128
Query: 59 ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLL 118
E+S T +++ L Y T E +L+PLQFG+P SR RY+ LAK P F
Sbjct: 129 ESSSTRERLVANLRTLGYTTLELLLTPLQFGIPNSRLRYYLLAKFSPSEF---------- 178
Query: 119 RSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTA 178
+ +Q D W + D V+T T +G
Sbjct: 179 --------------VGASEQEDRVWRHIP------------GRGTDWVDTRT---LSGEE 209
Query: 179 AVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKG 238
A ++ + V +P ++E+WG DIV P ++R CCFT+ Y + V+
Sbjct: 210 APGAVTEVRNYLDEESSVEPHPHAIPEKVLEKWGRLFDIVLPSARRTCCFTRGYTKLVER 269
Query: 239 TGSLLAT-------------VQPKNKGKASSL---KEQHLRYFTPREVANLHSF------ 276
GS+L + + G +++ + LRY +P E+ L F
Sbjct: 270 AGSVLQMNEDLDTTRTFDTFLDAQRAGDDNAVRLLRPLRLRYLSPTELLRLFEFLPPPST 329
Query: 277 --PGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 312
F +P ++ + +Y LLGNS+++ VV L+ YLF
Sbjct: 330 DSASFFAWPDQITTKTKYKLLGNSVNVRVVTQLINYLF 367
>gi|39995337|ref|NP_951288.1| DNA methyltransferase [Geobacter sulfurreducens PCA]
gi|39982099|gb|AAR33561.1| DNA methyltransferase, putative [Geobacter sulfurreducens PCA]
Length = 305
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 135/311 (43%), Gaps = 78/311 (25%)
Query: 3 GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKP--PHMLFVENVVGFET 60
G W LSPPCQPY +G+++ +D RA S + IL L P L +ENV GF
Sbjct: 64 GVDLWWLSPPCQPYCERGVRRDLADPRARSLVHILNLAARMSDEALPRHLALENVAGFVG 123
Query: 61 SDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRS 120
S+ H ++ E+L++ Y QE +L P + G+P RPRY+ A R+ L+ ++L S
Sbjct: 124 SEAHGRLTEVLSSRGYRLQERLLCPTELGIPSRRPRYYLAASRESLA------PAEVL-S 176
Query: 121 PSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAV 180
P P QP + LL + N + L A V
Sbjct: 177 PLP-------------RQPLAEYLDLLPA-----------------NGQPAELLLSPAIV 206
Query: 181 DDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTG 240
+ FGA F + +D PD+ CFT Y R + +G
Sbjct: 207 ERFGAG--------------FRI-----------LDPADPDAY-TTCFTSGYGRSLTASG 240
Query: 241 SLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLS 300
+ L +R F+P E+A L FP F+FP + LR+R+ L+GNSLS
Sbjct: 241 AYLRC-------------SDGVRRFSPEEIARLLHFPPSFRFPEEVPLRKRWQLVGNSLS 287
Query: 301 IAVVAPLLQYL 311
+A V +L+ L
Sbjct: 288 VAAVREVLRAL 298
>gi|112983066|ref|NP_001036934.1| DNA cytosine-5 methyltransferase [Bombyx mori]
gi|54888741|dbj|BAD67190.1| DNA cytosine-5 methyltransferase [Bombyx mori]
Length = 336
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 141/315 (44%), Gaps = 51/315 (16%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
Y L+SPPCQP+TR G +D R SFL ++++ + + +ENV GFE S
Sbjct: 71 YKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDK-LNTLQYILMENVKGFECS 129
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSP 121
+E L ++ QEF+LSP+ GVP SR RY+C+AKR ++ + + + P
Sbjct: 130 TVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRNN-TWNFKRKDELITCLP 188
Query: 122 SPLLGNDDMTVITKHDQPDDSW--DKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAA 179
+ I +++ PDD DK+L A
Sbjct: 189 KTFAKPHCLKDIIENNVPDDYLVPDKMLRK----------------------------AN 220
Query: 180 VDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGT 239
+ D A+ + H+ +E GS FT++ Y V+
Sbjct: 221 IFDICYADSNRSCCFTKAYTHY------VEGTGSV-------------FTETSYDIVQKY 261
Query: 240 GSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSL 299
L + + +LK+ LR+FT +E+ L SFP ++ FP ++ +Q Y LLGNS+
Sbjct: 262 LKLANYFEVGSDEFLQTLKKLKLRFFTSKEILQLMSFPSEYSFPKTVTRKQCYRLLGNSV 321
Query: 300 SIAVVAPLLQYLFAQ 314
++ V++ LLQ LF +
Sbjct: 322 NVKVISELLQILFDE 336
>gi|353231993|emb|CCD79348.1| putative dna (cytosine-5)-methyltransferase [Schistosoma mansoni]
Length = 293
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 127/253 (50%), Gaps = 45/253 (17%)
Query: 3 GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD 62
A+ W L PPCQP+TR G + +D R+ SF +L+LI ++ P + +ENV GFE S+
Sbjct: 66 NANVWSLCPPCQPFTRLGKRMCEADNRSSSFFHVLDLI--SILKPAGIILENVKGFEHSE 123
Query: 63 THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQL----L 118
++IE+L + DY ++F+LSPLQFG+P R R++ LA+ + S+ + L
Sbjct: 124 PWRRLIEVLNSCDYEYRQFLLSPLQFGIPNCRLRFYLLARLRSSSWNSNFKMGKSESIDL 183
Query: 119 RSP--SPLLGNDDMT----VITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGF 172
R P +P+L T VI+ + DD++ + ++ C P+ FL + + E F
Sbjct: 184 RPPIDAPMLPGCQCTSCSGVISHIEHTDDNFTEYIQFCRPISEFLLVPSDSSK---ELYF 240
Query: 173 LSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSY 232
L ++C ++R+ +DIV K+ CFTK Y
Sbjct: 241 LD------------------EKC------------LQRYFRVLDIVRSCDKKTRCFTKGY 270
Query: 233 YRYVKGTGSLLAT 245
+ ++GTGS+ T
Sbjct: 271 SKRLEGTGSVFQT 283
>gi|353234718|emb|CCA66740.1| hypothetical protein PIIN_00421 [Piriformospora indica DSM 11827]
Length = 241
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 125/284 (44%), Gaps = 78/284 (27%)
Query: 47 PHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 106
P + VENV GFETS T + +L Y T EF+L+P Q+G+P SR RY+ +A+ P
Sbjct: 15 PTYILVENVAGFETSTTRTSINRLLHELGYHTTEFLLTPRQYGIPNSRLRYYLMARLIPF 74
Query: 107 SFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQV 166
+ SP LG + C P GD
Sbjct: 75 TV-------------SPDLG--------------------ILRCLP----------GDN- 90
Query: 167 NTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCC 226
T ++ + + D T DR ++ RWG DIVYP S C
Sbjct: 91 ---THYIPSTISDYLDKNIDPHTAISDRVLA------------RWGRLFDIVYPSSTNSC 135
Query: 227 CFTKSYYRYVKGTGSLL-------------ATVQPKNKGKASSLKEQH---LRYFTPREV 270
CFT+ Y V+G+GS+L + KG+A +++ H LRYF+P E+
Sbjct: 136 CFTRGYSHLVEGSGSILQLNDALETSSVFDVYFSQQEKGEADAVQTLHQLQLRYFSPEEL 195
Query: 271 ANLH--SFPG-DFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYL 311
L S P F +P H+S + +Y L+GNS+++AVV L+ +L
Sbjct: 196 LRLFHLSTPSRKFLWPEHVSRKTKYRLIGNSVNVAVVGRLITFL 239
>gi|302843860|ref|XP_002953471.1| hypothetical protein VOLCADRAFT_63767 [Volvox carteri f.
nagariensis]
gi|300261230|gb|EFJ45444.1| hypothetical protein VOLCADRAFT_63767 [Volvox carteri f.
nagariensis]
Length = 302
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 71/110 (64%), Gaps = 4/110 (3%)
Query: 3 GAHAWLLSPPCQPYT--RQGLQKQSSDARAFSFLKILE--LIPHTVKPPHMLFVENVVGF 58
A WLL+PPCQPYT ++ ++D RA S L ++ ++P +PP L +ENV GF
Sbjct: 11 AADLWLLTPPCQPYTTTSNARRRDTADPRAASLLHLMSPAVLPAMQRPPTRLMMENVPGF 70
Query: 59 ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 108
SD+H M+ L + Y QEFI+SP Q GVPYSRPRYF LA R+PLSF
Sbjct: 71 VGSDSHKMMVAALGTAGYELQEFIVSPHQLGVPYSRPRYFALAVRRPLSF 120
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Query: 201 FLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQPKNKGKA-SSLKE 259
+ V + + R+ +D+V P S C CFTK Y + GS+LA+ G+A +
Sbjct: 184 YAVSAAQLARFWRVLDVVTPSSTYCNCFTKHYTDNLLAAGSVLASEDFAEPGEAHAEAVV 243
Query: 260 QHLRYFTPREVANLHSFPGDFQFPHH---LSLRQRYALLGNSLSIAVVAPLLQYLF 312
LR+F+P EVA +H D+ L RQ+YALLGN LS+ V + LL YL
Sbjct: 244 LGLRFFSPDEVAAIHGVRADWAARARAAGLQPRQQYALLGNGLSVDVASYLLTYLL 299
>gi|47207937|emb|CAF91437.1| unnamed protein product [Tetraodon nigroviridis]
Length = 405
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/145 (43%), Positives = 82/145 (56%), Gaps = 19/145 (13%)
Query: 180 VDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGT 239
+ DF +E + +D+ HFL P L+ R+ +DIV P +R CFTK Y +YV+GT
Sbjct: 267 IQDFLEPQENLNLDQ-----HFLPPKILL-RYAQLLDIVRPTCRRSICFTKGYGKYVEGT 320
Query: 240 GSLLATV-------------QPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHL 286
GS+L Q + + L E LRYFTPREVANL FP F FP +
Sbjct: 321 GSVLQCCMDTSVEHVFPRLDQCSEEERVQKLLELKLRYFTPREVANLMGFPPTFSFPESV 380
Query: 287 SLRQRYALLGNSLSIAVVAPLLQYL 311
S +Q+Y LLGNSL++ VVA LLQ L
Sbjct: 381 STKQQYRLLGNSLNVVVVAKLLQLL 405
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 61/95 (64%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
L+SPPCQP+TR GLQ+ +D+R SFL +++L+P K P + +ENV GFE S +
Sbjct: 71 LMSPPCQPFTRIGLQRDVADSRTRSFLHVVDLLPRLSKAPVFILLENVKGFEKSAAREYL 130
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK 102
+ L Y QE ++SP FG+P SR RY+ LAK
Sbjct: 131 LRTLRECGYAVQEMLVSPTHFGIPNSRLRYYLLAK 165
>gi|401409426|ref|XP_003884161.1| putative DNA methyltransferase 2 [Neospora caninum Liverpool]
gi|325118579|emb|CBZ54130.1| putative DNA methyltransferase 2 [Neospora caninum Liverpool]
Length = 794
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 65/100 (65%)
Query: 4 AHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDT 63
A WLLSPPCQPYTR G ++ D RA L +L+ + PP +LF+ENV GFE S T
Sbjct: 206 ADVWLLSPPCQPYTRGGKREDLHDPRARGLLNLLDCLERLADPPKLLFLENVRGFEESQT 265
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 103
A+++++L Y +EF+LSP Q G P +R RY+CLA R
Sbjct: 266 RARLLKVLRQRAYQVEEFLLSPTQLGFPNTRVRYYCLATR 305
>gi|339773547|gb|AEK05180.1| DNA methyltransferase 2 [Schistocerca gregaria]
Length = 199
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 78/129 (60%), Gaps = 2/129 (1%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
L+SPPCQP+TR GLQK ++D R FL L L+P + +ENV GFE S+
Sbjct: 61 LMSPPCQPFTRNGLQKDTADNRTSPFLHFLRLLPELTGNLKYILLENVKGFEKSEARDMF 120
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGN 127
+ IL ++++ QEF+LSP QF +P SR RY+ +AK++PL+F + L+ + +L
Sbjct: 121 VNILQEANFIFQEFLLSPFQFHIPNSRTRYYLIAKKRPLNFSFSI--KPLVDDITQILDG 178
Query: 128 DDMTVITKH 136
+D T+ H
Sbjct: 179 NDSTLYKTH 187
>gi|303277675|ref|XP_003058131.1| DNA methyltransferase [Micromonas pusilla CCMP1545]
gi|226460788|gb|EEH58082.1| DNA methyltransferase [Micromonas pusilla CCMP1545]
Length = 416
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 65/102 (63%), Gaps = 1/102 (0%)
Query: 4 AHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDT 63
A W LSPPCQPYTR+G Q+ D RA +F +LE+ P P + VENVVGFETS+T
Sbjct: 134 AELWTLSPPCQPYTRKGKQRHGDDPRATAFAHLLEIFPTLRARPDRVLVENVVGFETSET 193
Query: 64 HAKMIEILANSDYLTQEFI-LSPLQFGVPYSRPRYFCLAKRK 104
+I L + Y +EF+ SP GVP +RPRY+ LAK++
Sbjct: 194 RDALIRALETTGYAWREFVGASPADVGVPNARPRYYALAKKR 235
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 73/139 (52%), Gaps = 16/139 (11%)
Query: 192 VDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLAT------ 245
+D + D VP + E++ +D+V P S R CFT Y + V G GS+LA+
Sbjct: 277 LDERAASDDLTVPSRVTEKYWKWLDVVAPSSTRSECFTAGYGKTVYG-GSVLASDAFLSA 335
Query: 246 -----VQPKNKGK---ASSLKEQHLRYFTPREVANLHSFPGDFQFPHH-LSLRQRYALLG 296
V G+ AS LRYF+PRE+A+LH DF P L+ RQ Y LG
Sbjct: 336 RERDFVDAGGSGRVRLASPPPPGALRYFSPREIASLHGLGDDFALPSEVLTRRQLYFALG 395
Query: 297 NSLSIAVVAPLLQYLFAQA 315
NS+S+ VV+ L+++LF A
Sbjct: 396 NSISVDVVSSLMRHLFDDA 414
>gi|326427797|gb|EGD73367.1| methyltransferase [Salpingoeca sp. ATCC 50818]
Length = 519
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 65/97 (67%)
Query: 7 WLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAK 66
WL+SPPCQPYTR G Q D RA SFL ++E++ PP +LF+ENV FE S+T +
Sbjct: 87 WLMSPPCQPYTRIGKQLDVEDPRAASFLHMIEMLSKMESPPQLLFLENVKNFEHSETRRR 146
Query: 67 MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 103
++ +L +Y QEF++SP Q G+P +R RY+ LA R
Sbjct: 147 LLHVLHQRNYSVQEFLVSPTQLGIPNTRLRYYLLASR 183
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 263 RYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 312
R F E+ LH FP F+ P ++ +Q L+GNS+++ VVA LLQYL
Sbjct: 455 RLFAVSEMLRLHGFPEAFEMPAGITQKQGRGLVGNSVNVEVVAHLLQYLL 504
>gi|405958955|gb|EKC25033.1| tRNA (cytosine-5-)-methyltransferase [Crassostrea gigas]
Length = 373
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 67/101 (66%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
++SPPCQP+TR G + + D R SF+ +L L+P P + VENV GFE S+T K+
Sbjct: 71 VMSPPCQPFTRVGKKLDAEDIRTKSFIHLLSLLPRLNNCPKYILVENVKGFEDSETCLKL 130
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 108
E L ++ QEF+L+PLQFG+P SR RY+ +AKR PL F
Sbjct: 131 RETLMKCNFTYQEFLLTPLQFGIPNSRLRYYLIAKRSPLKF 171
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 64/120 (53%), Gaps = 19/120 (15%)
Query: 214 AMDIVYPDSKRCCCFTKSYYRYVKGTGSLLA--------------TVQPKNKGKASS--- 256
MDIV+P ++ CFTK Y +++G GS+ T++ KN+ + S
Sbjct: 247 VMDIVFPCLQKTTCFTKRYGHFMEGAGSIFQMSHSISVTSELKDRTLELKNRDQWSDEDY 306
Query: 257 --LKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQ 314
L LRYFTPRE+AN FP + FP LS Q Y LGNSL++ VV+ L+Q + +
Sbjct: 307 QVLSRLRLRYFTPREIANFLCFPATYNFPQDLSKIQLYRTLGNSLNVRVVSKLIQLMVKE 366
>gi|167515786|ref|XP_001742234.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778858|gb|EDQ92472.1| predicted protein [Monosiga brevicollis MX1]
Length = 356
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 65/101 (64%)
Query: 3 GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD 62
A WL+SPPCQPY+RQG Q+ DAR+ SF +L+ + PP ++ VENVVGFE+S
Sbjct: 28 AADLWLMSPPCQPYSRQGHQRGLEDARSDSFRYLLDALTQMKNPPSVILVENVVGFESSQ 87
Query: 63 THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 103
+++ L Y QEF LSP QFGVP SR RYF LA R
Sbjct: 88 GREELVATLNTLQYRFQEFWLSPDQFGVPNSRLRYFLLAIR 128
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 54/106 (50%), Gaps = 13/106 (12%)
Query: 216 DIVYPDSKRCCCFTKSYYRYVKGTGSLLATV-------------QPKNKGKASSLKEQHL 262
DIV P+ +R CFTK Y V+GTGS+ P +++ L
Sbjct: 249 DIVRPEERRSLCFTKGYSHKVEGTGSVFQVCICVAIPMAFEQLDVPSPGAGWPAVEALEL 308
Query: 263 RYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLL 308
RYFTP+E+ LH FP DF P ++ RQ +GNSL + +VA LL
Sbjct: 309 RYFTPQEMLRLHGFPTDFVIPSSVTDRQARKAIGNSLCVTIVAHLL 354
>gi|298714740|emb|CBJ25639.1| Cytosine-C5 specific DNA methyltransferase [Ectocarpus siliculosus]
Length = 412
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 65/101 (64%)
Query: 4 AHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDT 63
A WLLSPPCQP+ R G + D R+ SFL +L L+ PP LF+ENV GFE S
Sbjct: 121 ADIWLLSPPCQPFCRVGNKMDEQDNRSVSFLHLLSLLKTIRTPPSFLFLENVQGFEGSHA 180
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
H +++E L + ++++LSP Q G+P SR RY+CLA+R+
Sbjct: 181 HLRLLETLIARGFDVEQYLLSPNQLGIPNSRLRYYCLARRR 221
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 55/109 (50%), Gaps = 12/109 (11%)
Query: 216 DIVYPDSKRCCCFTKSYYRYVKGTGSL-LATVQPKNKGKASSL-----------KEQHLR 263
D+V S FTK Y ++ G + L T + + L + + +R
Sbjct: 281 DVVTLQSTETTTFTKGYRKHAGRAGPVVLLTDDGERRVSGEKLGRFPSGLDLGPEGKEVR 340
Query: 264 YFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 312
+F+ E+ LH FP F FP L+ RQR AL+GNS+++ VVA LL+++
Sbjct: 341 WFSDGEMLRLHGFPEAFDFPTALTPRQRCALVGNSVNVEVVALLLEFML 389
>gi|209875617|ref|XP_002139251.1| DNA (cytosine-5)-methyltransferase domain-containing protein
[Cryptosporidium muris RN66]
gi|209554857|gb|EEA04902.1| DNA (cytosine-5)-methyltransferase domain-containing protein
[Cryptosporidium muris RN66]
Length = 422
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 154/346 (44%), Gaps = 38/346 (10%)
Query: 4 AHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELI--PHTVKPPHMLFVENVVGFETS 61
A+ WLL P CQP+TR G ++ S D R LKI++L+ P + F+ENVV FE S
Sbjct: 74 ANIWLLGP-CQPFTRGGAKRDSDDNRCKPLLKIIDLMYKIDVSNMPSIWFIENVVNFEQS 132
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR-KPLSFRCQ--------- 111
TH MI++ + DY +F+LSP +P +R RY+C+A R L C+
Sbjct: 133 RTHKFMIDMFNDLDYTYIQFLLSPTLLNIPNTRVRYYCMAFRCSNLVLSCKYSILSRYEN 192
Query: 112 LLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEF------SNSGDQ 165
+ + +LR+ + +I Q ++D+LL +F GD
Sbjct: 193 FIASNILRNNCKGTKKLEYKLIINDPQNKSTYDELLCHLPYSSKFCYKLLHSHPKKIGDI 252
Query: 166 VNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWG----------SAM 215
+ T L + A ++ +SI + S IE G +
Sbjct: 253 IYTAKSSLFSEVANKVIERNNSFRFDIVNELSIVSTTITRSYIESAGRGEPLFMKSSNVD 312
Query: 216 DIVYPDSKRCCCFTKSYYRYVKGTGSLL-ATVQPKNKGKASSLKEQHLRYFTPREVANLH 274
+ Y + C S Y+ + T L + Q N+ L + ++R+ P E+ +L
Sbjct: 313 NTKYINEYLSCDEPSSVYKQIFDTSKLCPSRFQCINE---IDLSKCNIRFLQPSEILSLM 369
Query: 275 SFPGD-----FQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQA 315
FP + +++ L+Q+Y+L+GNS+SI +V+ L+ Y+ A
Sbjct: 370 GFPSNWLSAIYKYDSLEFLKQQYSLIGNSISIHIVSILMYYMIDLA 415
>gi|237834203|ref|XP_002366399.1| DNA methyltransferase 2, putative [Toxoplasma gondii ME49]
gi|211964063|gb|EEA99258.1| DNA methyltransferase 2, putative [Toxoplasma gondii ME49]
Length = 834
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 61/98 (62%)
Query: 3 GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD 62
A WLLSPPCQPYTR G ++ D RA L +L+ + PP +LF+ENV GFE S
Sbjct: 282 AADVWLLSPPCQPYTRGGKREDLHDPRARGLLHLLDCLERLKTPPKLLFLENVRGFEESQ 341
Query: 63 THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCL 100
T +++ +L Y +EF+LSP Q G P +R RY+CL
Sbjct: 342 TRQRLLSVLKKKAYTVEEFLLSPTQLGCPNTRVRYYCL 379
>gi|221486626|gb|EEE24887.1| DNA methyltransferase 2, putative [Toxoplasma gondii GT1]
Length = 830
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 61/98 (62%)
Query: 3 GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD 62
A WLLSPPCQPYTR G ++ D RA L +L+ + PP +LF+ENV GFE S
Sbjct: 282 AADVWLLSPPCQPYTRGGKREDLHDPRARGLLHLLDCLERLKTPPKLLFLENVRGFEESQ 341
Query: 63 THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCL 100
T +++ +L Y +EF+LSP Q G P +R RY+CL
Sbjct: 342 TRQRLLSVLKKKAYTVEEFLLSPTQLGCPNTRVRYYCL 379
>gi|307210936|gb|EFN87251.1| tRNA (cytosine-5-)-methyltransferase [Harpegnathos saltator]
Length = 238
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 67/103 (65%), Gaps = 1/103 (0%)
Query: 6 AWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHA 65
A L+SPPCQP+TR GLQ+ D+RA S L +L LIP +K + +ENV GFE S
Sbjct: 69 AILMSPPCQPFTRLGLQRDILDSRACSLLHVLSLIPK-LKNLKYILLENVQGFEVSQMRN 127
Query: 66 KMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 108
K+++ L Y +E +LSP QFG+P SR RY+ LAKRK L F
Sbjct: 128 KLVDCLEECGYAYRELMLSPSQFGIPNSRRRYYLLAKRKDLKF 170
>gi|389750852|gb|EIM91925.1| S-adenosyl-L-methionine-dependent methyltransferase [Stereum
hirsutum FP-91666 SS1]
Length = 452
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 115/239 (48%), Gaps = 26/239 (10%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQ-KQSSDARAFSFLKILE-LIP---HTVKPPHMLFVENVV 56
Y A WLLSP CQPYT Q K + D RA SFL I+ L+P + P + +ENV
Sbjct: 70 YAADLWLLSPSCQPYTVLNPQAKGADDPRAESFLWIVRTLLPGLKEKGREPGWVLIENVA 129
Query: 57 GFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQ 116
GFETS T +IE++ + Y T E +L+PLQFG+P SR RY+ LA++ P N
Sbjct: 130 GFETSSTRQILIEVMKSLGYHTIELLLTPLQFGIPNSRLRYYMLARKTP-------FNIP 182
Query: 117 LLRSPSPLLGNDDMTVITKHDQ-----PDDSWDKLLESCDPVERFLEFSNSGDQVNTETG 171
L S P + + D+ P +D + DP L+ + + V+
Sbjct: 183 LPPSSRPSDPTSNECALPPEDRVWRHIPGRGYDWV----DP-RNGLDVESVENNVDEIRR 237
Query: 172 FLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTK 230
+L + E+ E + +V ++ +WG D+V P+++R CCFT+
Sbjct: 238 YLDRSKESRWKKVVGEDGKE----RWMHPHMVSDRVLGKWGRLFDVVLPEARRTCCFTR 292
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 13/66 (19%)
Query: 261 HLRYFTPREVANLHSFP-------------GDFQFPHHLSLRQRYALLGNSLSIAVVAPL 307
LRYF+P E+ L F F +P +S + +Y L+GNS+++ VV+ L
Sbjct: 387 QLRYFSPSELLRLFCFERVANDTEEKTEEEKGFVWPEGISTKSKYRLIGNSVNVLVVSRL 446
Query: 308 LQYLFA 313
+ +LFA
Sbjct: 447 IDFLFA 452
>gi|290997570|ref|XP_002681354.1| predicted protein [Naegleria gruberi]
gi|284094978|gb|EFC48610.1| predicted protein [Naegleria gruberi]
Length = 435
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 150/341 (43%), Gaps = 54/341 (15%)
Query: 7 WLLSPPCQPYTRQGLQKQSSDARAFSFLKIL-ELIPHTVKPPHMLFVENVVGFETSDTHA 65
W +SPPCQP+T G +K S D R+ SFL ++ +L P + P +FVENV FE S T
Sbjct: 109 WTMSPPCQPFTLNGNRKDSEDDRSKSFLFLMADLFPQVL--PDYIFVENVKNFEISKTRQ 166
Query: 66 KMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLL 125
++ L N Y +E+++ P Q G+P R RY+ + KR + PL
Sbjct: 167 HLVNQLENFGYKYEEYLICPTQLGLPNQRVRYYLIGKR-------------VANITPPLE 213
Query: 126 GNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVD--DF 183
+++ I H D +L +P+ ++F +S + L G +D D
Sbjct: 214 KTEELREIPLH-LITDPPKTILRDQEPLRPKIDFESSYGK----EKILQLGAKLIDLYDL 268
Query: 184 GAAEETVEVDRCVSIDH-FLVPLSLIERWGSAMDIVYPD----------SKRCCCFTKSY 232
+ T ++ D +L ++ + G D+++ D C C TKSY
Sbjct: 269 NSILLTPGEEKKYQTDMIYLNEKNITKIKGYRYDLIFKDPYGKKNLTPIKSECSCITKSY 328
Query: 233 --YRYVKGTGSLLATVQPKNKGKASSLKEQH-----------------LRYFTPREVANL 273
++++GTG ++ + S + + LR+ P EV+ L
Sbjct: 329 GQVQFLRGTGPIVLILDENQMLDIDSNETIYKKIDFENPVETMMPLGKLRFLHPIEVSRL 388
Query: 274 HSF-PGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFA 313
+F P L+++Q Y L+GNS++ +A ++ LF+
Sbjct: 389 MTFVPWIMNNTGKLTVKQLYKLMGNSVNPITLANIIYLLFS 429
>gi|339237069|ref|XP_003380089.1| putative type II DNA modification methyltransferase [Trichinella
spiralis]
gi|316977147|gb|EFV60295.1| putative type II DNA modification methyltransferase [Trichinella
spiralis]
Length = 298
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 113/274 (41%), Gaps = 65/274 (23%)
Query: 7 WLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAK 66
W+LSPPCQP+ G ++ +D+RA F+ I+E++ P + +ENV GF S
Sbjct: 69 WMLSPPCQPFMLSGNRRDVNDSRAEPFVHIIEVLTKMQSFPKYILLENVPGFINSVACTN 128
Query: 67 MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLG 126
+ E L Y ++ FIL P FG+P R R + +A+ + +
Sbjct: 129 LTETLEMKGYNSKIFILDPYDFGIPNHRKRAYLIAEHESV-------------------- 168
Query: 127 NDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAA 186
DD+ + +Q L +C V + + +F
Sbjct: 169 -DDLVAVDACEQ--------LSNCPKV---------------------VCSKPISEFLCT 198
Query: 187 EETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATV 246
+ E+ + +LVP L+ MDIV D CFTK Y RYVKGTGS+L
Sbjct: 199 LQETELQK------YLVPERLLIH-KDCMDIVCRDDTSSNCFTKGYGRYVKGTGSILRCK 251
Query: 247 QPKNKGKASSLKEQHLRYFTPREVANLHSFPGDF 280
K LR+FTP E+ L FP F
Sbjct: 252 MQDGTEK--------LRFFTPSEIQRLMGFPETF 277
>gi|156358701|ref|XP_001624654.1| predicted protein [Nematostella vectensis]
gi|156211447|gb|EDO32554.1| predicted protein [Nematostella vectensis]
Length = 226
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/107 (50%), Positives = 65/107 (60%), Gaps = 6/107 (5%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
++SPPCQPYT GLQ S D RA SFL IL L+ PP +ENV GFETSDT +
Sbjct: 77 VMSPPCQPYTWVGLQGASKDPRALSFLHILSLLKRLQHPPKYWLIENVKGFETSDTRFYI 136
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLN 114
+ NS FI+S QFG+P SR RY+ LAKR PL+F + N
Sbjct: 137 LLAFCNS------FIVSSPQFGIPNSRLRYYLLAKRHPLTFSTAMGN 177
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 30/44 (68%)
Query: 199 DHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSL 242
+ FL+P ++ R+ +DIV S+R CCFTK+Y Y +GTGS+
Sbjct: 183 EQFLLPTKVLSRFSLVLDIVTAKSRRSCCFTKAYGHYAEGTGSV 226
>gi|195996059|ref|XP_002107898.1| hypothetical protein TRIADDRAFT_49657 [Trichoplax adhaerens]
gi|190588674|gb|EDV28696.1| hypothetical protein TRIADDRAFT_49657 [Trichoplax adhaerens]
Length = 254
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 63/98 (64%), Gaps = 8/98 (8%)
Query: 216 DIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHS 275
++V PDS+R CCFTKSY+ Y +GTGS+L P + LRYFTPREVAN+H
Sbjct: 165 NVVKPDSQRSCCFTKSYFHYAEGTGSVLQITNP--------ILHLKLRYFTPREVANIHC 216
Query: 276 FPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFA 313
FP F FP + + +Q Y LLGNSL++ V + LL+ L
Sbjct: 217 FPVHFNFPENATKKQCYRLLGNSLNVHVASELLKLLIT 254
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 52/90 (57%), Gaps = 14/90 (15%)
Query: 7 WLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAK 66
+ +SPPCQP+TR G + +DAR SFL +++L+ PP + +ENV GFETS
Sbjct: 78 YTMSPPCQPFTRLGKKADVNDARTSSFLHVIDLLIKMENPPKYILLENVKGFETSAAR-- 135
Query: 67 MIEILANSDYLTQEFILSPLQFGVPYSRPR 96
EF+L+PLQFG+P SR R
Sbjct: 136 ------------NEFLLTPLQFGIPNSRLR 153
>gi|270012712|gb|EFA09160.1| DNA methyltransferase 2 [Tribolium castaneum]
Length = 329
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 3 GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD 62
G + L+SPPCQP+TR GLQ+ +D R SF+ +L ++P +K +L +ENV GFE S
Sbjct: 66 GVNTILMSPPCQPFTRNGLQEDINDERTKSFIHVLAILPD-LKVTRIL-IENVKGFERSK 123
Query: 63 THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 108
+IE L + QEFIL+P Q G+P +R RY+CLAK+ P F
Sbjct: 124 MRDLLIETLEKCGFNYQEFILTPTQIGIPNTRHRYYCLAKKPPNVF 169
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 72/119 (60%), Gaps = 14/119 (11%)
Query: 207 LIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSL---LATVQPK--------NKGKAS 255
++ + DI Y S+ CCFTK+Y RYVKGTGS+ L + P+ G ++
Sbjct: 210 VLTNYLETTDIRYSTSRNTCCFTKAYGRYVKGTGSVYSDLPEITPEIFNQLSDHEPGSSA 269
Query: 256 SLKEQH---LRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYL 311
LK H +R+FTPREV L SFP DF FP + S +Q+Y LLGNS+++ VVA L++ L
Sbjct: 270 YLKLAHGLKMRFFTPREVGRLMSFPEDFTFPENTSDKQKYMLLGNSINVRVVAELIKLL 328
>gi|91089179|ref|XP_974235.1| PREDICTED: similar to DNA cytosine-5 methyltransferase [Tribolium
castaneum]
Length = 579
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 3 GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD 62
G + L+SPPCQP+TR GLQ+ +D R SF+ +L ++P +K +L +ENV GFE S
Sbjct: 316 GVNTILMSPPCQPFTRNGLQEDINDERTKSFIHVLAILPD-LKVTRIL-IENVKGFERSK 373
Query: 63 THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 108
+IE L + QEFIL+P Q G+P +R RY+CLAK+ P F
Sbjct: 374 MRDLLIETLEKCGFNYQEFILTPTQIGIPNTRHRYYCLAKKPPNVF 419
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 69/110 (62%), Gaps = 14/110 (12%)
Query: 216 DIVYPDSKRCCCFTKSYYRYVKGTGSL---LATVQPK--------NKGKASSLKEQH--- 261
DI Y S+ CCFTK+Y RYVKGTGS+ L + P+ G ++ LK H
Sbjct: 469 DIRYSTSRNTCCFTKAYGRYVKGTGSVYSDLPEITPEIFNQLSDHEPGSSAYLKLAHGLK 528
Query: 262 LRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYL 311
+R+FTPREV L SFP DF FP + S +Q+Y LLGNS+++ VVA L++ L
Sbjct: 529 MRFFTPREVGRLMSFPEDFTFPENTSDKQKYMLLGNSINVRVVAELIKLL 578
>gi|159490457|ref|XP_001703193.1| DNA methyltransferase [Chlamydomonas reinhardtii]
gi|158270733|gb|EDO96569.1| DNA methyltransferase [Chlamydomonas reinhardtii]
Length = 539
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 61/100 (61%), Gaps = 2/100 (2%)
Query: 4 AHAWLLSPPCQPYTR--QGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
A WLL+PPCQPYT +K ++D RA S L + ++P +PP L +ENV GF S
Sbjct: 101 ADVWLLTPPCQPYTTTTNARRKDTADPRAASLLHLASVLPSMRRPPSRLLLENVPGFAGS 160
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
+ + LA Y QEF++SP Q GVPYSRPRYF LA
Sbjct: 161 HSRRVLAAALAGCGYGLQEFLVSPHQLGVPYSRPRYFALA 200
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Query: 262 LRYFTPREVANLHSFPGDFQFPHHLSLR----QRYALLGNSLSIAVVAPLLQYLF 312
LR+FTP EVA LH P + + Q+YALLGN LS+ V A LLQYLF
Sbjct: 470 LRFFTPEEVAALHGLPQGWAARAAAAGVGAARQQYALLGNGLSVDVAAHLLQYLF 524
>gi|332029105|gb|EGI69118.1| tRNA (cytosine-5-)-methyltransferase [Acromyrmex echinatior]
Length = 309
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 70/117 (59%), Gaps = 7/117 (5%)
Query: 7 WLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAK 66
+SPPCQP+TR GL+K + D R+ S IL L+P +K + +ENV GFE S +
Sbjct: 54 MFMSPPCQPFTRLGLKKDAFDNRSCSLKHILNLLPE-LKNLKYILLENVKGFEVSQMRDE 112
Query: 67 MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF------RCQLLNNQL 117
++E + + Y+ +E ILSP QFG+P SR RY+ LAKR L F C LNN L
Sbjct: 113 LVECIKSCGYVYRELILSPCQFGMPNSRYRYYLLAKRNNLKFCFKQSSLCYTLNNIL 169
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 70/129 (54%), Gaps = 15/129 (11%)
Query: 201 FLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSL---------------LAT 245
+LVP L+++ +DI +S CCFTK Y Y +GTGS+ +
Sbjct: 177 YLVPSKLLQKRARILDIRTSESNGSCCFTKGYSYYAEGTGSVYCPFTDEIIKSKYNEITN 236
Query: 246 VQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVA 305
+ + + L + LR+F+P+E+ L FP DF FP H++ RQ+Y LLGNS++I VV+
Sbjct: 237 YENDSNKQMQILSDLKLRFFSPKEICRLMCFPEDFHFPEHITDRQKYRLLGNSINIHVVS 296
Query: 306 PLLQYLFAQ 314
L+ L +
Sbjct: 297 RLILLLCTE 305
>gi|194861352|ref|XP_001969765.1| GG23765 [Drosophila erecta]
gi|190661632|gb|EDV58824.1| GG23765 [Drosophila erecta]
Length = 331
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 66/100 (66%), Gaps = 1/100 (1%)
Query: 4 AHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDT 63
A+ L+SPPCQPYTRQGLQ+ + D R+ + + LIP ++L +ENV GFE+S
Sbjct: 55 ANVLLMSPPCQPYTRQGLQRDTEDKRSDALTHLCGLIPECQNLQYIL-MENVKGFESSQA 113
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 103
+ IE L S + +EFIL+P QF VP +R RY+C+A++
Sbjct: 114 RNQFIEALERSGFHWREFILTPTQFNVPNTRYRYYCIARK 153
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 74/145 (51%), Gaps = 26/145 (17%)
Query: 192 VDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGS---------- 241
V+ VS D FLVP ++ + MDI++P R CFTK Y Y +GTGS
Sbjct: 185 VEENVSSD-FLVPDDVLTKRVLVMDIIHPAQSRSMCFTKGYTHYTEGTGSAYTPLAEEES 243
Query: 242 -----LLATVQPKNKGKASS----------LKEQHLRYFTPREVANLHSFPGDFQFPHHL 286
L+ + + S L + LRYFTPREVA L SFP DF+F
Sbjct: 244 HRIFELVKEIDTNYQDAVKSEKILQQRLDLLHQVKLRYFTPREVARLMSFPEDFEFSPET 303
Query: 287 SLRQRYALLGNSLSIAVVAPLLQYL 311
+ RQ+Y LLGNS+++ VV L++ L
Sbjct: 304 TNRQKYRLLGNSINVKVVGELIKLL 328
>gi|295646363|gb|ADG23067.1| DNA (cytosine-5)-methyltransferase 2 [Gadus morhua]
Length = 139
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 60/95 (63%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
L+SPPCQP+TR GLQ +SD R SFL IL+L+P P + +ENV GFETS +
Sbjct: 44 LMSPPCQPFTRIGLQGDTSDPRTKSFLYILDLLPRLAVLPRFILLENVKGFETSSARDSL 103
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK 102
+ L + Y QE ++SP G+P SR RYF +AK
Sbjct: 104 LNTLRDCGYTFQEILVSPTSLGIPNSRLRYFLIAK 138
>gi|444706037|gb|ELW47400.1| tRNA (cytosine(38)-C(5))-methyltransferase [Tupaia chinensis]
Length = 208
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 79/133 (59%), Gaps = 13/133 (9%)
Query: 192 VDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQP--- 248
++ + ++ + +P L+ R+ +DIV P +R CFTK Y Y++GTGS+L T +
Sbjct: 74 LEENIDMNPYFLPPKLLLRYALLLDIVKPTCRRSTCFTKGYGSYIEGTGSVLQTAEDVQI 133
Query: 249 ----------KNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNS 298
+ K + L LRYFTP+E+ANL FP +F FP ++++QRY LLGNS
Sbjct: 134 EDIYKSLTNLSQEEKITQLLMLKLRYFTPKEIANLLGFPPEFGFPEKITVKQRYRLLGNS 193
Query: 299 LSIAVVAPLLQYL 311
L++ VVA L++ L
Sbjct: 194 LNVHVVAKLIKIL 206
>gi|407040168|gb|EKE39997.1| DNA (cytosine-5)-methyltransferase, putative [Entamoeba nuttalli
P19]
Length = 330
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 71/117 (60%), Gaps = 3/117 (2%)
Query: 199 DHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQPK--NKGKASS 256
+ + +P LI + G DIV D KR CCFTKSY + V+GTGS+ ++P KA
Sbjct: 209 ESYYIPSDLILKKGMLFDIVGKDDKRTCCFTKSYTKIVEGTGSIYCPIEPHFIPVKKAED 268
Query: 257 LKEQHLRYFTPREVANLHSFPGDFQFP-HHLSLRQRYALLGNSLSIAVVAPLLQYLF 312
L ++LRYFTP E+ +H F +F L+ +Q+Y LGNS+S V+A L++YLF
Sbjct: 269 LLNKNLRYFTPNEIKKIHGFSSNFTTQIDGLTDKQQYQCLGNSVSCFVIAQLMEYLF 325
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 3/113 (2%)
Query: 3 GAHAWLLSPPCQPYTRQGLQKQS--SDARAFSFLKIL-ELIPHTVKPPHMLFVENVVGFE 59
+ W +SPPCQPY + K +D RA S L + +++P+ P +F+ENV F+
Sbjct: 79 NCNTWFMSPPCQPYNNSIMSKHKDINDPRAKSVLHLYRDILPYLTNKPTHIFIENVPLFK 138
Query: 60 TSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQL 112
S ++ IL + Y ++ I SP+ G+P SR RY+ +A+ P QL
Sbjct: 139 ESLVFKEIYNILIKNQYYIKDIICSPIDIGIPNSRTRYYVMARLTPFKNDIQL 191
>gi|195387886|ref|XP_002052623.1| GJ17650 [Drosophila virilis]
gi|194149080|gb|EDW64778.1| GJ17650 [Drosophila virilis]
Length = 332
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 65/101 (64%), Gaps = 1/101 (0%)
Query: 3 GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD 62
GA+ L+SPPCQP+TRQGLQ+ D R+ + + LIP ++L +ENV GFE S
Sbjct: 54 GANMLLMSPPCQPHTRQGLQRDVDDKRSCALSHLCSLIPQCETLEYVL-MENVKGFEGSQ 112
Query: 63 THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 103
+ IE L + Y +EFIL+P QF VP +R RY+C+A++
Sbjct: 113 ARKQFIEALEKAGYHWREFILTPTQFNVPNTRHRYYCIARK 153
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 67/134 (50%), Gaps = 24/134 (17%)
Query: 202 LVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLL------------------ 243
LVP ++ + MDI++P R CFTK Y Y +GTGS
Sbjct: 196 LVPDDVLTKRVLVMDIIHPSQSRSMCFTKGYTHYTEGTGSAFTPLSEAESHSIFEAVKEI 255
Query: 244 ------ATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGN 297
+ + L+E LRYFTPREVA L SFP DF+FP + RQRY LLGN
Sbjct: 256 DMDPNSTNCEAAQHRRLELLREVKLRYFTPREVARLMSFPEDFEFPAETTNRQRYRLLGN 315
Query: 298 SLSIAVVAPLLQYL 311
S+++ VV LL+ L
Sbjct: 316 SINVCVVGELLKLL 329
>gi|183230936|ref|XP_655267.2| DNA (cytosine-5)-methyltransferase [Entamoeba histolytica
HM-1:IMSS]
gi|45505012|gb|AAS66974.1| 5-cytosine DNA methyltransferase [Entamoeba histolytica]
gi|169802689|gb|EAL49892.2| DNA (cytosine-5)-methyltransferase, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449702632|gb|EMD43233.1| DNA (cytosine5)-methyltransferase, putative [Entamoeba histolytica
KU27]
Length = 322
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 71/117 (60%), Gaps = 3/117 (2%)
Query: 199 DHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQPK--NKGKASS 256
+ + +P LI + G DIV D KR CCFTKSY + V+GTGS+ ++P KA
Sbjct: 201 ESYSIPSDLILKKGMLFDIVGKDDKRTCCFTKSYTKIVEGTGSIYCPIEPHFIPVKKAED 260
Query: 257 LKEQHLRYFTPREVANLHSFPGDFQFP-HHLSLRQRYALLGNSLSIAVVAPLLQYLF 312
L ++LRYFTP E+ +H F +F L+ +Q+Y LGNS+S V+A L++YLF
Sbjct: 261 LLNKNLRYFTPNEIKKIHGFSSNFTTQIDGLTDKQQYQCLGNSVSCFVIAQLMEYLF 317
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Query: 3 GAHAWLLSPPCQPYTRQGLQKQS--SDARAFSFLKIL-ELIPHTVKPPHMLFVENVVGFE 59
+ W +SPPCQPY + K +D RA S L + +++P+ + P +F+ENV F+
Sbjct: 71 NCNTWFMSPPCQPYNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPKHIFIENVPLFK 130
Query: 60 TSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQL 112
S ++ IL + Y ++ I SP+ G+P SR RY+ +A+ P QL
Sbjct: 131 ESLVFKEIYNILIKNQYYIKDIICSPIDIGIPNSRTRYYVMARLTPFKNEIQL 183
>gi|383875353|pdb|3QV2|A Chain A, Structure Analysis Of Entamoeba Histolytica
Methyltransferase Ehmeth
Length = 327
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 71/117 (60%), Gaps = 3/117 (2%)
Query: 199 DHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQPK--NKGKASS 256
+ + +P LI + G DIV D KR CCFTKSY + V+GTGS+ ++P KA
Sbjct: 206 ESYSIPSDLILKKGMLFDIVGKDDKRTCCFTKSYTKIVEGTGSIYCPIEPHFIPVKKAED 265
Query: 257 LKEQHLRYFTPREVANLHSFPGDFQFP-HHLSLRQRYALLGNSLSIAVVAPLLQYLF 312
L ++LRYFTP E+ +H F +F L+ +Q+Y LGNS+S V+A L++YLF
Sbjct: 266 LLNKNLRYFTPNEIKKIHGFSSNFTTQIDGLTDKQQYQCLGNSVSCFVIAQLMEYLF 322
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Query: 3 GAHAWLLSPPCQPYTRQGLQKQS--SDARAFSFLKIL-ELIPHTVKPPHMLFVENVVGFE 59
+ W +SPPCQPY + K +D RA S L + +++P+ + P +F+ENV F+
Sbjct: 76 NCNTWFMSPPCQPYNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPKHIFIENVPLFK 135
Query: 60 TSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQL 112
S ++ IL + Y ++ I SP+ G+P SR RY+ +A+ P QL
Sbjct: 136 ESLVFKEIYNILIKNQYYIKDIICSPIDIGIPNSRTRYYVMARLTPFKNEIQL 188
>gi|17137742|ref|NP_477475.1| methyltransferase 2, isoform A [Drosophila melanogaster]
gi|7297918|gb|AAF53163.1| methyltransferase 2, isoform A [Drosophila melanogaster]
Length = 345
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 77/145 (53%), Gaps = 26/145 (17%)
Query: 192 VDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGS---------- 241
V+ VS D FLVP ++ + MDI++P R CFTK Y Y +GTGS
Sbjct: 199 VEENVSPD-FLVPDDVLTKRVLVMDIIHPAQSRSMCFTKGYTHYTEGTGSAYTPLSEDES 257
Query: 242 -----LLATVQPKNKGKASS----------LKEQHLRYFTPREVANLHSFPGDFQFPHHL 286
L+ + N+ + S L + LRYFTPREVA L SFP +F+FP
Sbjct: 258 HRIFELVKEIDTSNQDASKSEKILQQRLDLLHQVRLRYFTPREVARLMSFPENFEFPPET 317
Query: 287 SLRQRYALLGNSLSIAVVAPLLQYL 311
+ RQ+Y LLGNS+++ VV L++ L
Sbjct: 318 TNRQKYRLLGNSINVKVVGELIKLL 342
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 67/100 (67%), Gaps = 1/100 (1%)
Query: 4 AHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDT 63
A+ L+SPPCQP+TRQGLQ+ + D R+ + + LIP + ++L +ENV GFE+S
Sbjct: 69 ANMLLMSPPCQPHTRQGLQRDTEDKRSDALTHLCGLIPECQELEYIL-MENVKGFESSQA 127
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 103
+ IE L S + +EFIL+P QF VP +R RY+C+A++
Sbjct: 128 RNQFIESLERSGFHWREFILTPTQFNVPNTRYRYYCIARK 167
>gi|170084905|ref|XP_001873676.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651228|gb|EDR15468.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 330
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/105 (50%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 7 WLLSPPCQPYTRQGLQ-KQSSDARAFSFLKILE-LIPH---TVKPPHMLFVENVVGFETS 61
WLLSP CQPYT + K +SD RA SFL +++ ++P T + P L VENV GFETS
Sbjct: 71 WLLSPACQPYTILNPKAKDASDPRAQSFLHLIQNVLPELGSTNQHPQRLLVENVAGFETS 130
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 106
T ++ IL + Y T E +L+PLQFG+P SR RY+ LAK+ PL
Sbjct: 131 TTRQILVSILHSLGYSTLELLLTPLQFGIPNSRLRYYLLAKKAPL 175
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 72/135 (53%), Gaps = 17/135 (12%)
Query: 192 VDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLAT-----V 246
+DR FLVP ++++WG DIV P S+R CCFT+ Y + V+ +GS+L V
Sbjct: 197 LDRGYDPQEFLVPDKILKKWGRLFDIVLPSSRRTCCFTRGYTQLVERSGSVLQNNEILDV 256
Query: 247 QPKNKGKASSLKEQHLRYFTPREVANLHSFPG---------DFQFPHHLSLRQRYALLGN 297
QP+ L LRYF+P E+ + F F +P +S + +Y L+GN
Sbjct: 257 QPE---AVKILHPLGLRYFSPEELLRIFDFNSCDPRADLEPAFHWPDDISTKTKYRLIGN 313
Query: 298 SLSIAVVAPLLQYLF 312
S++I V+ L+ YLF
Sbjct: 314 SVNIRVIQELIDYLF 328
>gi|116007318|ref|NP_001036355.1| methyltransferase 2, isoform C [Drosophila melanogaster]
gi|113194978|gb|ABI31309.1| methyltransferase 2, isoform C [Drosophila melanogaster]
Length = 345
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 77/145 (53%), Gaps = 26/145 (17%)
Query: 192 VDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGS---------- 241
V+ VS D FLVP ++ + MDI++P R CFTK Y Y +GTGS
Sbjct: 199 VEENVSPD-FLVPDDVLTKRVLVMDIIHPAQSRSMCFTKGYTHYTEGTGSAYTPLSEDES 257
Query: 242 -----LLATVQPKNKGKASS----------LKEQHLRYFTPREVANLHSFPGDFQFPHHL 286
L+ + N+ + S L + LRYFTPREVA L SFP +F+FP
Sbjct: 258 HRIFELVKEIDTSNQDASKSEKILQQRLDLLHQVRLRYFTPREVARLMSFPENFEFPPET 317
Query: 287 SLRQRYALLGNSLSIAVVAPLLQYL 311
+ RQ+Y LLGNS+++ VV L++ L
Sbjct: 318 TNRQKYRLLGNSINVKVVGELIKLL 342
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 67/100 (67%), Gaps = 1/100 (1%)
Query: 4 AHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDT 63
A+ L+SPPCQP+TRQGLQ+ + D R+ + + LIP + ++L +ENV GFE+S
Sbjct: 69 ANMLLMSPPCQPHTRQGLQRDTEDKRSDALTHLCGLIPECQELEYIL-MENVKGFESSQA 127
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 103
+ IE L S + +EFIL+P QF VP +R RY+C+A++
Sbjct: 128 RNQFIESLERSGFHWREFILTPTQFNVPNTRYRYYCIARK 167
>gi|195443002|ref|XP_002069228.1| GK21086 [Drosophila willistoni]
gi|194165313|gb|EDW80214.1| GK21086 [Drosophila willistoni]
Length = 221
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 91/159 (57%), Gaps = 10/159 (6%)
Query: 3 GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIP--HTVKPPHMLFVENVVGFET 60
A+ L+SPPCQP+TRQGLQ+ + D R+ + ++ L+P T+K + +ENV GFE
Sbjct: 55 NANMLLMSPPCQPHTRQGLQRDTEDKRSSALNQLCSLLPKCETIK---YILMENVKGFEC 111
Query: 61 SDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR-KPLSFRCQLLNNQLL- 118
S + IE L + + +EFIL+P QF VP +R RY+CLA++ K F + Q+
Sbjct: 112 SQARQQFIEALQQAKFYWREFILTPTQFQVPNTRYRYYCLARKDKDFDFPSGKIWEQMPG 171
Query: 119 RSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFL 157
++P P ++M I+ +P S + L D ++R L
Sbjct: 172 QAPHP---TNEMDTISSLLEPSISTSEFLVPDDVLKRVL 207
>gi|194765989|ref|XP_001965107.1| GF21561 [Drosophila ananassae]
gi|190617717|gb|EDV33241.1| GF21561 [Drosophila ananassae]
Length = 334
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 65/101 (64%), Gaps = 1/101 (0%)
Query: 3 GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD 62
A+ L+SPPCQP+TRQGLQK + D R+ + + LIP K + +ENV GFE S
Sbjct: 68 NANMILMSPPCQPHTRQGLQKDTEDRRSDALTHLCALIPE-CKTLQYILMENVKGFECSQ 126
Query: 63 THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 103
+ ++ L +++ +EFIL+P QF VP +R RY+C+A++
Sbjct: 127 ARNQFVDALEKAEFYWREFILTPTQFNVPNTRHRYYCIARK 167
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 73/138 (52%), Gaps = 17/138 (12%)
Query: 188 ETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQ 247
E VE D +FLVP ++ + MDI++P R CFTK Y Y +GTGS +
Sbjct: 197 EIVEED---VASNFLVPDDVLTKRVLVMDIIHPTQSRSMCFTKGYTHYTEGTGSAYTPLS 253
Query: 248 PKN--------------KGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYA 293
+ + + L + LRYFTPREVA L SFP +F FP + RQ+Y
Sbjct: 254 EEESHRLFKLLEDTEDAEARLKLLHQIKLRYFTPREVARLMSFPEEFTFPGETTNRQKYR 313
Query: 294 LLGNSLSIAVVAPLLQYL 311
LLGNS+++ VV L++ L
Sbjct: 314 LLGNSINVKVVGELIKLL 331
>gi|428177515|gb|EKX46394.1| hypothetical protein GUITHDRAFT_107597 [Guillardia theta CCMP2712]
Length = 355
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 135/324 (41%), Gaps = 56/324 (17%)
Query: 1 MYGAHAWLLSPPCQPY--TRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF 58
+ G W +SPPCQPY T+ Q+ D R+ I++L+ PP + +ENV GF
Sbjct: 69 LEGFDLWTMSPPCQPYSTTKAANQRDDLDPRSQGLHHIIKLLLDVKNPPKWILLENVKGF 128
Query: 59 ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLL 118
S K + + +++ S+R LLN +
Sbjct: 129 HGSKMQNKFLGAI------------------------------EQRGFSWRQFLLNPIQV 158
Query: 119 RSPSPLLGNDDMTVITKHDQ--PDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTG 176
P+ L D + T D D + + E+ D + +N E+
Sbjct: 159 GIPNNRLRYDMLLRATCDDWHYKGDLFTDVPETSD---------QRAEAMNGESSKEERS 209
Query: 177 TAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIER-WGSAMDIVYPDSKRCCCFTKSYYR- 234
+ +F +E + D + P S++E+ W + V CFT SY +
Sbjct: 210 VRRLREF--LDEELGPD---DPQELVTPASILEKPWARGLSYVGQHDTTTFCFTGSYGKV 264
Query: 235 YVKGTGSLLATVQPKNKGKASSLKEQ------HLRYFTPREVANLHSFPGDFQFPHHLSL 288
Y K +GS+L + + KE +R F+PRE+ NL FP F+FP L+L
Sbjct: 265 YHKSSGSMLYMHADHALAEVALDKEDMTRHIGRIRLFSPREILNLMGFPKGFKFPEGLTL 324
Query: 289 RQRYALLGNSLSIAVVAPLLQYLF 312
R +Y L+GNS+++ VVA L ++L
Sbjct: 325 RHKYKLVGNSINVTVVALLFKFLI 348
>gi|167539782|ref|XP_001741349.1| DNA (cytosine-5)-methyltransferase [Entamoeba dispar SAW760]
gi|165894050|gb|EDR22134.1| DNA (cytosine-5)-methyltransferase, putative [Entamoeba dispar
SAW760]
Length = 322
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 72/118 (61%), Gaps = 3/118 (2%)
Query: 199 DHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQPK--NKGKASS 256
+ + +P LI + G DIV D KR CCFTKSY + V+GTGS+ ++ KA +
Sbjct: 201 ESYYIPSDLILKKGMLFDIVGKDDKRTCCFTKSYTKIVEGTGSIYCPIESHFIPVKKAEN 260
Query: 257 LKEQHLRYFTPREVANLHSFPGDFQFP-HHLSLRQRYALLGNSLSIAVVAPLLQYLFA 313
L ++LRYFTP E+ +H F +F ++ +Q+Y LGNS+S V+A L++YLF+
Sbjct: 261 LLNKNLRYFTPNEIKKIHGFSSEFTTQVDGITDKQQYQCLGNSVSCFVIAQLMEYLFS 318
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 3/113 (2%)
Query: 3 GAHAWLLSPPCQPYTRQGLQKQS--SDARAFSFLKIL-ELIPHTVKPPHMLFVENVVGFE 59
+ W +SPPCQPY + K +D RA S L + +++P + P +F+ENV F+
Sbjct: 71 NCNTWFMSPPCQPYNTSIMSKHKDINDPRAKSVLHLYRDILPFLINKPTHIFIENVPLFK 130
Query: 60 TSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQL 112
S ++ IL + Y ++ I SP+ G+P SR RY+ +A+ P QL
Sbjct: 131 ESLVFKEIYNILIKNQYYIKDIICSPIDIGIPNSRTRYYVMARLTPFKNEIQL 183
>gi|409910784|ref|YP_006889249.1| DNA methyltransferase [Geobacter sulfurreducens KN400]
gi|298504342|gb|ADI83065.1| DNA methyltransferase, putative [Geobacter sulfurreducens KN400]
Length = 305
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 62/107 (57%), Gaps = 2/107 (1%)
Query: 3 GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKP--PHMLFVENVVGFET 60
G W LSPPCQPY +G+++ +D RA S + IL+L P L +ENV GF
Sbjct: 64 GVDLWWLSPPCQPYCERGVRRDLADPRARSLVHILDLAARMSDEALPRHLALENVAGFVG 123
Query: 61 SDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 107
S+ H ++ E+LA Y QE +L P + G+P RPRY+ A R+ L+
Sbjct: 124 SEAHGRLTEVLALRGYRLQERLLCPTELGIPSRRPRYYLAASRQALA 170
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 62/114 (54%), Gaps = 15/114 (13%)
Query: 200 HFLVPLSLIERWGSAMDIVYP-DSKR-CCCFTKSYYRYVKGTGSLLATVQPKNKGKASSL 257
L+ S++ER+G+ I+ P DS CFT Y R + +G+ L N G
Sbjct: 198 ELLLSPSIVERFGAGFRILDPADSDAYTTCFTSGYGRSLTASGAYLRC----NDG----- 248
Query: 258 KEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYL 311
+R F+P E+A L FP F+FP + LR+R+ L+GNSLS+A V +L+ L
Sbjct: 249 ----VRRFSPEEIARLLHFPPSFRFPEEVPLRKRWQLVGNSLSVAAVREVLRAL 298
>gi|126649199|ref|XP_001388272.1| DNA methyltransferase PMT1 - like protein [Cryptosporidium parvum
Iowa II]
gi|126117194|gb|EAZ51294.1| DNA methyltransferase PMT1 - like protein [Cryptosporidium parvum
Iowa II]
Length = 303
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 133/298 (44%), Gaps = 38/298 (12%)
Query: 45 KPPHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
K P FVENV FETS+TH +MI++L+ ++ T EF+LSP GVP +R RY+C++ RK
Sbjct: 9 KLPKAWFVENVANFETSNTHKEMIKMLSKLNFCTFEFMLSPTLIGVPNTRVRYYCVSVRK 68
Query: 105 PLSFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSN--- 161
+ + LN + + V+ H S +K E P + LE+SN
Sbjct: 69 DSANLIKQLNELKISIYQKNCQSIASNVLLSH-----SIEKNTEDFKPEKIPLEYSNLLC 123
Query: 162 -SGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGS-AMDIVY 219
+ N + ++ D ++ + + F ++I+ S DIV
Sbjct: 124 SLPYEYNQIIQMIDNIPNSISDVVMKSNDIDYESFNLLKQF--AKNIIKNNPSFKFDIVN 181
Query: 220 PDSKRCCCFTKSYYRYVKGTGSLLATVQPKNKGKASSL---------------------- 257
+SK FTKSY KG G L ++ S+
Sbjct: 182 INSKASTTFTKSYIE-TKGRGGPLFDFSENHEKIEKSIIDYYDTYSHIFNTRILEHQRFQ 240
Query: 258 ---KEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 312
+LR F P+E+ + FP ++ ++ L+++Y+L+GNS+SI +V LL ++
Sbjct: 241 TARDNDNLRCFHPKEMLLIMGFPNNWFEGVNIDLKKQYSLIGNSISIHIVTILLHFML 298
>gi|373487375|ref|ZP_09578043.1| DNA-cytosine methyltransferase [Holophaga foetida DSM 6591]
gi|372009457|gb|EHP10077.1| DNA-cytosine methyltransferase [Holophaga foetida DSM 6591]
Length = 289
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Query: 4 AHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDT 63
A WL+SPPCQP+ R G + D R+ +FL +++L+ + PP L +ENV+GF SD
Sbjct: 64 ADTWLMSPPCQPFCRMGNHRGLEDLRSKAFLHLMDLL--RLIPPEHLVLENVIGFLGSDA 121
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 107
H + E L S +E+ L P QFG+P RPR + +A R P++
Sbjct: 122 HELLAERLRASGMHWREYQLCPTQFGIPNLRPRVYLVASRHPIA 165
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 46/93 (49%), Gaps = 13/93 (13%)
Query: 212 GSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVA 271
G + +V P+S+ CF Y + G+G L T Q +R F+P EVA
Sbjct: 200 GPGLALVNPESRTSACFIGGYGKRFVGSGPFLRT-------------PQGIRRFSPEEVA 246
Query: 272 NLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVV 304
L P +F+FP +S +RY LLGN LSI V
Sbjct: 247 RLLGLPREFRFPDSISRTKRYKLLGNGLSIPVA 279
>gi|195035415|ref|XP_001989173.1| GH11576 [Drosophila grimshawi]
gi|193905173|gb|EDW04040.1| GH11576 [Drosophila grimshawi]
Length = 327
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
Query: 3 GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD 62
A+ L+SPPCQP+TRQGLQ+ D R+ + + L+P ++L +ENV GFE S
Sbjct: 54 NANVLLMSPPCQPHTRQGLQRDVDDKRSCALSHLCCLLPFCETLDYVL-MENVKGFEASQ 112
Query: 63 THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 103
+ IE L + + +EFIL+P QF VP +R RY+C+A++
Sbjct: 113 ARQQFIEALEKAGFHWREFILTPTQFSVPNTRYRYYCIARK 153
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 70/135 (51%), Gaps = 25/135 (18%)
Query: 199 DHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQPKNKGKASSLK 258
D LVP ++ + MDI++P R CFTK Y Y +GTGS P ++ +A S+
Sbjct: 194 DETLVPDDVLSKRVLVMDIIHPSQSRSMCFTKGYTHYTEGTGSAFT---PLSEEQAHSIF 250
Query: 259 E----------------------QHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLG 296
E LRYFTPREVA L SFP F+FP + RQ+Y LLG
Sbjct: 251 EAVKQIDTGSDEAQRRRLELLRQLKLRYFTPREVARLMSFPEYFEFPAETTNRQKYRLLG 310
Query: 297 NSLSIAVVAPLLQYL 311
NS+++ VV LL+ L
Sbjct: 311 NSINVRVVGELLKLL 325
>gi|195114574|ref|XP_002001842.1| GI17066 [Drosophila mojavensis]
gi|193912417|gb|EDW11284.1| GI17066 [Drosophila mojavensis]
Length = 331
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Query: 3 GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD 62
A+ L+SPPCQP+TRQGLQ+ D R+ + + LIP ++L +ENV GFE S
Sbjct: 54 NANMLLMSPPCQPHTRQGLQRDVEDKRSCALAHLCLLIPQCDTLEYVL-MENVKGFEVSQ 112
Query: 63 THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 103
+ IE L + + +E IL+P QF VP +R RY+C+A++
Sbjct: 113 ARQQFIEALDKAGFHWRELILTPTQFKVPNTRHRYYCIARK 153
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 71/137 (51%), Gaps = 24/137 (17%)
Query: 199 DHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLA-------------- 244
D FLVP ++ + MDI++P R CFTK Y Y +GTGS+
Sbjct: 193 DDFLVPDDVLSKRVLVMDIIHPSQSRSMCFTKGYTHYTEGTGSVFTPLSEAQSHSIFEAV 252
Query: 245 ---TVQPKNKGKASS-------LKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYAL 294
+ P +K + L+ LRYFTPREVA L SFP +F+FP RQ+Y L
Sbjct: 253 KQIDMDPNSKDSEEAQQRRLELLRRVKLRYFTPREVARLMSFPEEFEFPPETKNRQKYRL 312
Query: 295 LGNSLSIAVVAPLLQYL 311
LGNS+++ VV LL+ L
Sbjct: 313 LGNSINVCVVGELLKLL 329
>gi|412986361|emb|CCO14787.1| tRNA (cytosine-5-)-methyltransferase [Bathycoccus prasinos]
Length = 443
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 63/118 (53%), Gaps = 14/118 (11%)
Query: 3 GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIP------------HTVKPPHML 50
G LSPPCQPYTR+G + DAR+ + +I+++ T P +
Sbjct: 150 GCEILTLSPPCQPYTRKGKNRGEKDARSTALARIIDIFEDAGEEKEESVGTRTTALPKRI 209
Query: 51 FVENVVGFETSDTHAKMIEILANSDYLTQEFI-LSP-LQFGVPYSRPRYFCLAKRKPL 106
+ENVVGFE + IE L ++Y +EF+ LSP GVP RPRY+ LA+RK L
Sbjct: 210 LLENVVGFELGTERERFIEALKKNEYHVKEFVGLSPETMLGVPVKRPRYYLLARRKEL 267
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 260 QHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 312
+ +RYF+P E+ LH DF FP LS+RQ+Y L+GN +S+ VVA LL+YLF
Sbjct: 390 KSVRYFSPTELCRLHGIKDDFVFPPSLSMRQQYKLIGNGISVHVVAKLLEYLF 442
>gi|50841408|gb|AAT84068.1| 5-cytosine DNA methyltransferase [Entamoeba invadens]
gi|440292743|gb|ELP85927.1| methyltransferase, putative [Entamoeba invadens IP1]
Length = 324
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 80/145 (55%), Gaps = 12/145 (8%)
Query: 172 FLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKS 231
F+ +V F E TV+V+ F V L+ + G DIV S+R CCFTKS
Sbjct: 186 FVKYENVSVSTF--LENTVDVN-------FEVKKELLLKKGMLFDIVGVKSQRTCCFTKS 236
Query: 232 YYRYVKGTGSLLA--TVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFP-HHLSL 288
Y + V+GTGS+LA ++ KA L HLRYFTP E+ +H FP F +S
Sbjct: 237 YTKIVEGTGSILAPQVDTFESVKKAEDLLNLHLRYFTPTEIKRIHGFPETFTTNVAGVSE 296
Query: 289 RQRYALLGNSLSIAVVAPLLQYLFA 313
+ +Y LGNS+S V++ L+++LF+
Sbjct: 297 KGQYQCLGNSVSCYVISQLMEHLFS 321
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 3/113 (2%)
Query: 4 AHAWLLSPPCQPYTRQGLQKQSS--DARAFSFLKIL-ELIPHTVKPPHMLFVENVVGFET 60
A+ W +SPPCQPY + K D RA S L + +++ + P +F+ENV F+
Sbjct: 75 ANVWFMSPPCQPYNNSIMSKHKDIDDPRAKSVLHLYRDVLKNMENKPEHIFIENVPLFKE 134
Query: 61 SDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLL 113
S ++ +L +Y Q+ ++SP Q G+P SR RY+ +A++ C +
Sbjct: 135 SLVFKDIMCVLNELEYHIQDIVISPHQIGIPNSRTRYYVMARKTKFETPCTFV 187
>gi|237835125|ref|XP_002366860.1| DNA methyltransferase, putative [Toxoplasma gondii ME49]
gi|211964524|gb|EEA99719.1| DNA methyltransferase, putative [Toxoplasma gondii ME49]
Length = 1172
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 69/109 (63%), Gaps = 8/109 (7%)
Query: 2 YGA-HA--WLLSPPCQPYTRQGLQKQSSDARAFSFLKILEL---IPHTVKPPHMLFVENV 55
YGA HA WL+SPPCQP+TR GLQK ++D R SFL +L++ +PH +P ++L +ENV
Sbjct: 441 YGAFHADIWLVSPPCQPFTRIGLQKGNADRRNVSFLYLLDVLCQLPHAQRPKYIL-LENV 499
Query: 56 VGFETSDTHAKMIEILAN-SDYLTQEFILSPLQFGVPYSRPRYFCLAKR 103
V FE SDT ++ L Y F L+PL FG+P R R F AK+
Sbjct: 500 VRFEVSDTFDCLVHALECVCGYEVNVFHLNPLHFGIPNCRSRCFVTAKK 548
Score = 40.4 bits (93), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 10/74 (13%)
Query: 248 PKNKGKASSLK-----EQHLRYFTPREVANLHSFPGDFQFPHHLSLR----QRYALLGNS 298
PK + K L E +R+F+P E+ LH FP F FP R QR ++GNS
Sbjct: 1094 PKKRNKGWELHDILPPETLVRFFSPNEMLALHGFPPSFSFPEADEPRAWPAQRR-MVGNS 1152
Query: 299 LSIAVVAPLLQYLF 312
L++ +V L+ +L
Sbjct: 1153 LNVHLVGMLIDFLV 1166
>gi|418066940|ref|ZP_12704295.1| C-5 cytosine-specific DNA methylase [Geobacter metallireducens
RCH3]
gi|373559652|gb|EHP85941.1| C-5 cytosine-specific DNA methylase [Geobacter metallireducens
RCH3]
Length = 330
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 59/104 (56%), Gaps = 4/104 (3%)
Query: 3 GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILEL---IPHTVKPPHMLFVENVVGFE 59
G W LSPPCQPY +G ++ +D RA S + ILEL IP + P H L +ENV GF
Sbjct: 89 GVDLWWLSPPCQPYCERGARRDLADPRARSLVHILELLERIPDDLLPRH-LALENVAGFV 147
Query: 60 TSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 103
S+ H + E+L + + +E L P + G P RPRY+ A R
Sbjct: 148 GSEGHGLLTEVLTSRGFQVRERFLCPTELGAPMRRPRYYLAASR 191
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 15/112 (13%)
Query: 200 HFLVPLSLIERWGSAMDIVYPDSKRCC--CFTKSYYRYVKGTGSLLATVQPKNKGKASSL 257
L+ ++ R+G A+ I+ C CFT Y R + GS L
Sbjct: 223 ELLLSPDVVARFGGALPILDSGDGSACATCFTAGYGRSITSAGSYLQCAS---------- 272
Query: 258 KEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQ 309
+R+F+P E+ +FP F+FP + LR+R+ L+GNSLS+A V +L+
Sbjct: 273 ---GVRHFSPEEIVRFMAFPEGFRFPDEVPLRKRWHLIGNSLSVAAVREVLR 321
>gi|404495112|ref|YP_006719218.1| DNA methyltransferase [Geobacter metallireducens GS-15]
gi|403377942|gb|ABB30500.2| DNA methyltransferase, putative [Geobacter metallireducens GS-15]
Length = 311
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 59/104 (56%), Gaps = 4/104 (3%)
Query: 3 GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILEL---IPHTVKPPHMLFVENVVGFE 59
G W LSPPCQPY +G ++ +D RA S + ILEL IP + P H L +ENV GF
Sbjct: 70 GVDLWWLSPPCQPYCERGARRDLADPRARSLVHILELLERIPDDLLPRH-LALENVAGFV 128
Query: 60 TSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 103
S+ H + E+L + + +E L P + G P RPRY+ A R
Sbjct: 129 GSEGHGLLTEVLTSRGFQVRERFLCPTELGAPMRRPRYYLAASR 172
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 15/112 (13%)
Query: 200 HFLVPLSLIERWGSAMDIVYPDSKRCC--CFTKSYYRYVKGTGSLLATVQPKNKGKASSL 257
L+ ++ R+G A+ I+ C CFT Y R + GS L
Sbjct: 204 ELLLSPDVVARFGGALPILDSGDGSACATCFTAGYGRSITSAGSYLQCAS---------- 253
Query: 258 KEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQ 309
+R+F+P E+ +FP F+FP + LR+R+ L+GNSLS+A V +L+
Sbjct: 254 ---GVRHFSPEEIVRFMAFPEGFRFPDEVPLRKRWHLIGNSLSVAAVREVLR 302
>gi|223999981|ref|XP_002289663.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974871|gb|EED93200.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 533
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 99/425 (23%), Positives = 167/425 (39%), Gaps = 150/425 (35%)
Query: 2 YGAHAWLLSPPCQPYTRQ--GLQKQSSDARAFSFLKILELIPHTVKP--PHMLFVENVVG 57
+ A W +SPPCQP+TRQ K+ D R+ SFL + ++ + P ++ +ENVVG
Sbjct: 132 HSAIVWCMSPPCQPHTRQHSNQHKELEDPRSKSFLHLCHVLSVMEEDSLPCLILLENVVG 191
Query: 58 FETS------------------DTHAKMIE----------------ILANSDYLTQEFIL 83
FE S D H + +LA +Y F L
Sbjct: 192 FERSWMSACATADASSGDSNEADQHQPSTQQSQESEPSGSFQMWRKVLAQREYQVGHFHL 251
Query: 84 SPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGNDDMTV---ITKHDQPD 140
P F +P +RPRY+C+A FR L +L++S GND++ + + KH+
Sbjct: 252 DPTHFRLPNNRPRYYCVA------FRRGSLQARLMKS-----GNDNIRMGFNVKKHNL-- 298
Query: 141 DSWDKLLESC--DPV---ERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRC 195
+ES +PV E+ ++ + + FL D + ++++++
Sbjct: 299 ----FTIESLSNEPVIHTEKSIQEYHVVPTIPNIKSFLDA------DISSKKQSLQIPEK 348
Query: 196 VSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLL---------ATV 246
V + W D+V P R CFT SY ++++GTGS+L + V
Sbjct: 349 VRMSS--------SAW--CFDLVTPYHLRSSCFTHSYGKFIRGTGSILYYGQLRLGDSAV 398
Query: 247 QPKNKGKASSLKEQH-----------------------------------------LRYF 265
++ + S++ +H +RY
Sbjct: 399 GDESNSQWSTVDLKHDNKNEDENDTTIPTIDKFQLALPEERSFEEDWSAAIDWDTSIRYL 458
Query: 266 TPREVANLHSFP------GD---------------FQFPHHLSLRQRYALLGNSLSIAVV 304
+ E+A L FP G+ F FP +++Q++ LLGNSL++ V
Sbjct: 459 SGTEIARLMGFPVSEPAVGEESNKSSSTDGAKMRMFSFPQSCAMKQQWKLLGNSLNVRVA 518
Query: 305 APLLQ 309
A + +
Sbjct: 519 ATVTE 523
>gi|401405250|ref|XP_003882075.1| putative DNA methyltransferase [Neospora caninum Liverpool]
gi|325116489|emb|CBZ52043.1| putative DNA methyltransferase [Neospora caninum Liverpool]
Length = 1250
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 65/107 (60%), Gaps = 5/107 (4%)
Query: 1 MYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILEL---IPHTVKPPHMLFVENVVG 57
+ A WL+SPPCQP+TR GLQK ++D R SFL +L++ +PH +P ++L ENVV
Sbjct: 427 AFEADLWLVSPPCQPFTRIGLQKGNADRRNASFLYLLDVLCQLPHAQRPKYLLL-ENVVR 485
Query: 58 FETSDTHAKMIEILAN-SDYLTQEFILSPLQFGVPYSRPRYFCLAKR 103
FE SDT ++ L Y F L+PL FG+P R R F AK+
Sbjct: 486 FEVSDTFDCLLHALECVCGYQVDVFHLNPLHFGIPNCRSRCFVTAKK 532
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 259 EQHLRYFTPREVANLHSFPGDFQFPHHLSLR---QRYALLGNSLSIAVVAPLLQYLF 312
E +R+F+P+E+ LH FP F FP R + ++GNSL++ +V L+ +L
Sbjct: 1188 ETAVRFFSPQEILALHGFPPSFAFPDADEPRAWPSQRRMVGNSLNVHLVGMLIDFLV 1244
>gi|158284395|ref|XP_306830.2| Anopheles gambiae str. PEST AGAP012836-PA [Anopheles gambiae str.
PEST]
gi|157021124|gb|EAA45924.2| AGAP012836-PA [Anopheles gambiae str. PEST]
Length = 238
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 75/140 (53%), Gaps = 7/140 (5%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFV--ENVVGFETSDTHA 65
L+SPPCQP+TR G +D R+ FL I EL+ K P + F+ ENV GFE S
Sbjct: 85 LMSPPCQPFTRNGKFNDINDRRSDPFLHICELLD---KMPLVKFILMENVKGFENSQACE 141
Query: 66 KMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLL 125
L + + Q++ILSP QFGVP +R RY+C+AKR F+ + + ++ +P
Sbjct: 142 MYKARLREAGFHYQQYILSPHQFGVPNTRHRYYCIAKRHGADFKWK--SEDIITTPQSGC 199
Query: 126 GNDDMTVITKHDQPDDSWDK 145
G V T D D+ ++
Sbjct: 200 GAKQTLVGTIVDTQQDALEQ 219
>gi|312385012|gb|EFR29606.1| hypothetical protein AND_01274 [Anopheles darlingi]
Length = 348
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
L+SPPCQP+TR G D R+ FL I EL+ H + + +ENV GFE S A
Sbjct: 83 LMSPPCQPFTRNGKFNDIHDRRSDPFLHICELL-HEIPTVEFILMENVKGFEGSQACALY 141
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
L + + QE++LSP QFG+P +R RY+CLA
Sbjct: 142 KARLKEAGFEYQEYVLSPHQFGIPNTRHRYYCLA 175
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 192 VDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLL 243
VD + + +L+ + + + MD+ P+S CFTK+Y Y +GTGS+
Sbjct: 210 VDPSENDEKYLLKEATLRKHLPIMDVCTPESNNSMCFTKAYTHYAEGTGSVF 261
>gi|395539996|ref|XP_003771948.1| PREDICTED: tRNA (cytosine-5-)-methyltransferase-like [Sarcophilus
harrisii]
Length = 305
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 59/96 (61%), Gaps = 13/96 (13%)
Query: 231 SYYRYVKGTGSLLAT---VQPKN----------KGKASSLKEQHLRYFTPREVANLHSFP 277
+Y YV+GTGS+L T +Q +N + K L LRYFTPRE+ANLH FP
Sbjct: 210 NYGTYVEGTGSVLQTAEDIQIENVYTSLETLSEEEKLMKLSMLKLRYFTPREIANLHGFP 269
Query: 278 GDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFA 313
+F FP L+++Q Y LLGNSL++ VV+ L++ L
Sbjct: 270 PEFGFPEKLTMKQCYRLLGNSLNVHVVSKLIRTLLG 305
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 48/78 (61%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
L+SPPCQP+TR GLQ +D R SFL IL ++P K P + +ENV GFE S
Sbjct: 121 LMSPPCQPFTRIGLQGDVTDPRTKSFLHILRILPRLQKLPKYILLENVKGFEVSSARDLF 180
Query: 68 IEILANSDYLTQEFILSP 85
++ L N + QEF+LSP
Sbjct: 181 VQTLENCGFKYQEFLLSP 198
>gi|242024278|ref|XP_002432555.1| Modification methylase HaeIII, putative [Pediculus humanus
corporis]
gi|212518015|gb|EEB19817.1| Modification methylase HaeIII, putative [Pediculus humanus
corporis]
Length = 267
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 63/94 (67%), Gaps = 5/94 (5%)
Query: 3 GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIP--HTVKPPHMLFVENVVGFET 60
G L+SPPCQP+TR GL++ + D R+ S L +L L+P H+V + + +ENV GFE
Sbjct: 64 GIDMILMSPPCQPHTRNGLKRDNLDERSHSLLYLLTLLPKLHSV---NYILLENVKGFEI 120
Query: 61 SDTHAKMIEILANSDYLTQEFILSPLQFGVPYSR 94
S ++++IL +S Y QEF+L+P QFG+P SR
Sbjct: 121 SRIRDELVDILISSGYTYQEFLLTPTQFGIPNSR 154
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 36/50 (72%)
Query: 264 YFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFA 313
YFTP+E++ L FP FP++ + +Q+Y LLGNS+++ VV+ L++ L +
Sbjct: 218 YFTPKEISKLMCFPDSLIFPNYFTKKQKYRLLGNSVNVHVVSILIKLLVS 267
>gi|324516189|gb|ADY46452.1| tRNA (cytosine-5-)-methyltransferase [Ascaris suum]
Length = 193
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 51/85 (60%)
Query: 4 AHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDT 63
A W +SPPCQP+T++G+Q+ D R + ++I + +PP +F+ENV GFETS
Sbjct: 78 ADLWTMSPPCQPFTKKGMQRDVDDRRCDALMRICTALERMHEPPRFIFLENVCGFETSTA 137
Query: 64 HAKMIEILANSDYLTQEFILSPLQF 88
H+ +E+LA Y Q L LQ+
Sbjct: 138 HSIFVEVLAKLHYHMQVRNLYYLQW 162
>gi|428671680|gb|EKX72598.1| hypothetical protein BEWA_050660 [Babesia equi]
Length = 526
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 126/326 (38%), Gaps = 90/326 (27%)
Query: 27 DARAFSFLKILELIPHT--VKPPHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFILS 84
D R L+I LI T K P +F+EN+ F S + I L Y F LS
Sbjct: 238 DGRRAPILRITRLILSTDPEKLPLYIFLENIKEFYHSVDYRIFIAALRIRGYKVLSFKLS 297
Query: 85 PLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWD 144
LQFG P R R + AK + LR PL +IT + P+ ++
Sbjct: 298 TLQFGFPNERTRLYITAKLDGFP--------EYLRHYGPL------DLIT--ELPNSFYE 341
Query: 145 KLLESCDPVER--FLEFSNSGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFL 202
+ + + + LEF N E D SI F
Sbjct: 342 RYGVRKEALVKAPILEFLNE----------------------------ENDAHDSI--FN 371
Query: 203 VPLSLIE-RWGSAMDIVYPD-----SKRCCCFTKSYYRYVKGTGSLLATVQPK------- 249
+P S++ R + DIVY D CFTK+Y R++ GTGS+ P
Sbjct: 372 IPESILACRKSLSFDIVYKDPTYKGRSYTMCFTKNYGRFINGTGSVWCFGGPDPESYKDD 431
Query: 250 NKGKASSLKEQHLRYFTPREVANLHSFPGDFQ---------------------------F 282
N+ + ++ +RYF+P+EVA L F D Q F
Sbjct: 432 NRLENLAVYSNSIRYFSPKEVARLMGFRVDEQKFAFVPFLTSLDCACTNGDKDGYTSLKF 491
Query: 283 PHHLSLRQRYALLGNSLSIAVVAPLL 308
P +LS +Q Y LLGNSL+ VVA L
Sbjct: 492 PRNLSNKQLYGLLGNSLNPQVVATLF 517
>gi|397623507|gb|EJK67022.1| hypothetical protein THAOC_11993 [Thalassiosira oceanica]
Length = 502
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 16/116 (13%)
Query: 2 YGAHAWLLSPPCQPYTRQ--GLQKQSSDARAFSFLKILELIPHTVKP--PHMLFVENVVG 57
Y A W LSPPCQP+TRQ ++ D R+ SFL + +L+ + P++L +ENVVG
Sbjct: 154 YDATVWCLSPPCQPHTRQHSNQHRERDDPRSSSFLHLCDLLIEMDEDMLPNLLLLENVVG 213
Query: 58 FETSDTHAK------------MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
FE + A ++L + Y T F L P G+P +RPR++ +A
Sbjct: 214 FEQNWAVADDCGRDDMGSFTLWRKVLCDRQYETAHFHLDPTDVGIPNNRPRHYTVA 269
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 74/154 (48%), Gaps = 39/154 (25%)
Query: 196 VSIDHFLVPLSLIERWGS-AMDIVYPDSKRCCCFTKSYYRYVKGTGSLLAT--------- 245
S++ +P + E G+ DIV P+ +R CFT SY ++++GTGS+L T
Sbjct: 341 ASLEQLRIPKKIRESSGAWCFDIVTPEQRRSSCFTHSYGKFIRGTGSILYTGPVAANDCE 400
Query: 246 ------------VQPKNKGKASSLK-----EQHLRYFTPREVANLHSFPGD--------- 279
PK++ S E+ +RY + E+A L FP D
Sbjct: 401 GDALPRAELFELADPKDRAYDESWSKRINWEEDMRYLSGTEIARLFGFPVDCASDGPTAM 460
Query: 280 --FQFPHHLSLRQRYALLGNSLSIAVVAPLLQYL 311
F+FP +++Q++ LLGNS+++ +VA + Y+
Sbjct: 461 RSFEFPSTCTMKQQWKLLGNSINV-IVASTVAYV 493
>gi|67595546|ref|XP_666006.1| DNA methyltransferase PMT1 - like protein [Cryptosporidium hominis
TU502]
gi|54656899|gb|EAL35775.1| DNA methyltransferase PMT1 - like protein [Cryptosporidium hominis]
Length = 205
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 43/60 (71%)
Query: 45 KPPHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
K P FVENV FETS+TH +MI++L+ ++ T EF+LSP GVP +R RY+C++ RK
Sbjct: 9 KLPKAWFVENVANFETSNTHKEMIKMLSKLNFCTFEFMLSPTLIGVPNTRVRYYCVSVRK 68
>gi|221044562|dbj|BAH13958.1| unnamed protein product [Homo sapiens]
Length = 254
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 57/96 (59%), Gaps = 13/96 (13%)
Query: 198 IDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLAT---VQPKNKGKA 254
++ +L+P + R+ +DIV P +R CFTK Y Y++GTGS+L T VQ +N K+
Sbjct: 140 VNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSYIEGTGSVLQTAEDVQVENIYKS 199
Query: 255 ---SSLKEQ-------HLRYFTPREVANLHSFPGDF 280
S +EQ LRYFTP+E+ANL FP +F
Sbjct: 200 LTNLSQEEQITKLLILKLRYFTPKEIANLLGFPPEF 235
>gi|14573295|gb|AAK68034.1| DNA methyltransferase 2b [Homo sapiens]
Length = 137
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 54/104 (51%), Gaps = 26/104 (25%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
L+SPPCQP+TR LQK P + +ENV GFE S T +
Sbjct: 56 LMSPPCQPFTR--LQKL----------------------PKYILLENVKGFEVSSTRDLL 91
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFR 109
I+ + N + QEF+LSP G+P SR RYF +AK +PL F+
Sbjct: 92 IQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQ 135
>gi|443477276|ref|ZP_21067135.1| DNA-cytosine methyltransferase [Pseudanabaena biceps PCC 7429]
gi|443017642|gb|ELS32040.1| DNA-cytosine methyltransferase [Pseudanabaena biceps PCC 7429]
Length = 328
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 68/137 (49%), Gaps = 10/137 (7%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQP++ GL+K D R F I ++I P ++F+ENV GF+ D T A +
Sbjct: 95 PCQPFSHAGLKKGFDDTRGTLFFDIAKII--EFHRPEVVFLENVKGFKNHDKGNTFAVVK 152
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLA-KRKPLSFRCQLLNNQLLRSPSPLLGN 127
L N Y +L+ FGVP +R R + +A + ++F + NNQ +R + L N
Sbjct: 153 RTLNNLGYKVFAEVLNAKNFGVPQNRERIYIIAFQNHDINFEFPIGNNQGIRLGNILEAN 212
Query: 128 DDMTVITKHDQPDDSWD 144
D +K+ D W+
Sbjct: 213 VD----SKYTISDKLWE 225
>gi|119484300|ref|ZP_01618917.1| modification methylase NlaIV [Lyngbya sp. PCC 8106]
gi|119457774|gb|EAW38897.1| modification methylase NlaIV [Lyngbya sp. PCC 8106]
Length = 449
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 140/371 (37%), Gaps = 81/371 (21%)
Query: 5 HAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDT 63
H LL+ PCQ ++ G ++ + R F +I+ LI P +L +ENV G T D
Sbjct: 66 HDVLLAGFPCQSFSYAGKKQGFGEIRGTLFFEIMRLI--DTNQPKVLILENVRGLTTHD- 122
Query: 64 HAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFC---------------LAKRK 104
H K + + Y +FIL+ + FG+P +R R + L +
Sbjct: 123 HGKTFATIKHEIQLRGYSFYQFILNSVNFGLPQNRVRVYMIGVLNASPQFNLISDLGPKD 182
Query: 105 PLSFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGD 164
S+ LN L+ P + + + PD S+D C P EFS + +
Sbjct: 183 SHSYNAVQLNLFSLQHFPPKVKD------ILEENPDSSFD-----CSP-----EFSQALN 226
Query: 165 QVNTETGFLSTGTAAVDDFGAAE----ETVEVDRCVSIDHFLVPLSLIER----WGSAMD 216
+V G +D G E +C + L+ L + ER +G D
Sbjct: 227 KVVQGDLNKLHGVRLIDYRGGNSIHSWELGLRGKCSEDEIKLMNLLITERRKKKFGKHQD 286
Query: 217 ------------IVYPD---------SKRCCCFTKSYYRYVKGTGS-----------LLA 244
+P SKR Y+ V G S +
Sbjct: 287 GKQLTREQIASFFEHPKLTHLLESLVSKRYLKVINGQYKPVSGNFSFEVYKFLDPEKVSV 346
Query: 245 TVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVV 304
T+ + + + +R TPRE A L FP DFQ H +L + + LGNS+SI V+
Sbjct: 347 TLVASDANRIGVYHQNRVRRITPREAARLQGFPDDFQL--HPNLTKAFYQLGNSVSINVI 404
Query: 305 APLLQYLFAQA 315
+ Q + AQ
Sbjct: 405 TAITQDVIAQV 415
>gi|260909972|ref|ZP_05916659.1| modification methylase EcoRII [Prevotella sp. oral taxon 472 str.
F0295]
gi|260635922|gb|EEX53925.1| modification methylase EcoRII [Prevotella sp. oral taxon 472 str.
F0295]
Length = 370
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVK---PPHMLFVENVVGFETSDTHAKMI 68
PCQP++ GL++ D R F I ++ V+ PP +LF+ENV G + D +
Sbjct: 89 PCQPFSVAGLKRGFDDTRGTLFFNIANIVREKVRAGHPPRVLFLENVRGLKNHDKGKTLN 148
Query: 69 EILANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRKPL 106
ILA D L + +L+ FGVP +R R F +A + L
Sbjct: 149 VILATLDELGYNYSHEVLNAKYFGVPQNRERLFIIAWNREL 189
>gi|68075627|ref|XP_679733.1| modification methylase-like protein [Plasmodium berghei strain
ANKA]
gi|56500547|emb|CAH94597.1| modification methylase-like protein, putative [Plasmodium berghei]
Length = 689
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 27 DARAFSFLKILELIPH--TVKPPHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFILS 84
D R +SF + L+ + P +F+ENV FE+S + I + N +Y Q ++LS
Sbjct: 256 DKRVYSFFHVCNLLKNMNVNNLPKYIFIENVKNFESSFSFLYFINSIKN-NYNFQTYLLS 314
Query: 85 PLQFGVPYSRPRYFCLAKRK 104
PLQFG+P R R++C+ KRK
Sbjct: 315 PLQFGIPNERLRFYCICKRK 334
>gi|365875704|ref|ZP_09415230.1| DNA-cytosine methyltransferase [Elizabethkingia anophelis Ag1]
gi|442587430|ref|ZP_21006247.1| DNA-cytosine methyltransferase [Elizabethkingia anophelis R26]
gi|365756549|gb|EHM98462.1| DNA-cytosine methyltransferase [Elizabethkingia anophelis Ag1]
gi|442562871|gb|ELR80089.1| DNA-cytosine methyltransferase [Elizabethkingia anophelis R26]
Length = 436
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 56/102 (54%), Gaps = 7/102 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQP++ GL++ + R F ILE++ +T P M +ENV G ++ D K ++++
Sbjct: 173 PCQPFSYAGLKQGFDETRGTLFFDILEILKNTT--PKMFLLENVKGLKSHDG-GKTLKVI 229
Query: 72 ANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 109
NS Y + IL+ FG+P R R++C+ R ++F
Sbjct: 230 ENSLTELGYTIKWEILNSYDFGLPQYRERWYCVGFRDKVNFE 271
>gi|393781071|ref|ZP_10369272.1| DNA (cytosine-5-)-methyltransferase [Bacteroides salyersiae
CL02T12C01]
gi|392677406|gb|EIY70823.1| DNA (cytosine-5-)-methyltransferase [Bacteroides salyersiae
CL02T12C01]
Length = 371
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVK---PPHMLFVENVVGFETSDTHAKMI 68
PCQP++ GL++ D R F I +I + PP +LF+ENV G +T D +
Sbjct: 89 PCQPFSVAGLKRGFEDTRGTLFFSIANIIREKINAGNPPRVLFLENVRGLKTHDKGNTLK 148
Query: 69 EILANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRKPL 106
ILA + L + +L+ FGVP +R R F +A K L
Sbjct: 149 VILATLEELGYAYSFDVLNAKYFGVPQNRERLFIIAWYKKL 189
>gi|221052431|ref|XP_002257791.1| modification methylase-like protein [Plasmodium knowlesi strain H]
gi|193807622|emb|CAQ38127.1| modification methylase-like protein, putative [Plasmodium knowlesi
strain H]
Length = 749
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 109/256 (42%), Gaps = 52/256 (20%)
Query: 27 DARAFSFLKILELIPHTVKP--PHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFILS 84
D R+ SF+ I L+ + + P +F+ENV FE S + I + +Y Q ++LS
Sbjct: 287 DERSRSFIHICNLLKNVKEENLPKYIFIENVRNFELSTSFFYFINSVK-ENYNFQTYLLS 345
Query: 85 PLQFGVPYSRPRYFCLAKRK------------PLSFRCQLLNNQLLRSPSPLLGNDDMTV 132
PLQ+G+P R R++C+ +RK + L +N L+ + + ++
Sbjct: 346 PLQYGIPNERLRFYCICRRKHKLADLTSGESFTSGWTTSLYSNSLMPAKCIMPAFENNAN 405
Query: 133 ITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAEETVEV 192
+ L D E++ N+ +++N L+ GT ++++ + T+E
Sbjct: 406 FRPSQRYSFYTPSLATFLDHNEKYEITCNTNEEIN-----LTNGT--LEEYQVSNSTLE- 457
Query: 193 DRCVSIDHFLVPLSLIERWGSA-------------------------MDIVYPDSKRCCC 227
+C S F + I R G+ D++ ++ C
Sbjct: 458 -KCSS---FCFDMIDINRNGNVCCFEGGRYYVEKSETIKDLPNEKNLKDLINSNNLHSMC 513
Query: 228 FTKSYYRYVKGTGSLL 243
FT +Y RY+ G+GS+L
Sbjct: 514 FTSNYGRYINGSGSVL 529
>gi|124512074|ref|XP_001349170.1| modification methylase-like protein, putative [Plasmodium
falciparum 3D7]
gi|23498938|emb|CAD51016.1| modification methylase-like protein, putative [Plasmodium
falciparum 3D7]
Length = 706
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 27 DARAFSFLKILELIPHT--VKPPHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFILS 84
D R SF+ I L+ P +F+ENV FE S + + + N +Y Q ++LS
Sbjct: 254 DERTKSFIHICTLLTKVDFKNLPEYIFIENVKNFELSSSFIYFLYCIKN-NYSFQTYLLS 312
Query: 85 PLQFGVPYSRPRYFCLAKRKPLSFR 109
PLQFG+P R R++C+ K+K F+
Sbjct: 313 PLQFGIPNERLRFYCICKKKNYDFK 337
>gi|228469904|ref|ZP_04054843.1| cytosine-specific methyltransferase NlaX [Porphyromonas uenonis
60-3]
gi|228308539|gb|EEK17327.1| cytosine-specific methyltransferase NlaX [Porphyromonas uenonis
60-3]
Length = 395
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVK---PPHMLFVENVVGFETSDTHAKMI 68
PCQP++ GL++ D R F I ++ ++ PP +LF+ENV G T D +
Sbjct: 111 PCQPFSVAGLRRGFEDTRGTLFFNIANIVKSKIEEGNPPKVLFLENVRGLRTHDKGNTLR 170
Query: 69 EILANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRKPL 106
IL + L + +L+ FGVP +R R F +A K L
Sbjct: 171 VILNTLEELGYRYSYEVLNAKYFGVPQNRERLFIVAWSKDL 211
>gi|254445875|ref|ZP_05059351.1| DNA-cytosine methyltransferase superfamily [Verrucomicrobiae
bacterium DG1235]
gi|198260183|gb|EDY84491.1| DNA-cytosine methyltransferase superfamily [Verrucomicrobiae
bacterium DG1235]
Length = 321
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF---ETSDTHAKMI 68
PCQP++ G Q DAR F +++ L+ + K P ++F+ENV + + T + +
Sbjct: 75 PCQPFSVSGKQLGFEDARGTLFFEVMRLV--SAKRPKVVFLENVANYVRHQGGKTLKRTV 132
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 107
+L + Y T+ +L+ +GVP +R R + + RK L
Sbjct: 133 GMLEEAGYATKWAVLNASDYGVPQARKRLYIVGIRKDLG 171
>gi|345515584|ref|ZP_08795085.1| DNA (cytosine-5-)-methyltransferase [Bacteroides dorei 5_1_36/D4]
gi|423309031|ref|ZP_17287021.1| DNA (cytosine-5-)-methyltransferase [Bacteroides uniformis
CL03T12C37]
gi|229436216|gb|EEO46293.1| DNA (cytosine-5-)-methyltransferase [Bacteroides dorei 5_1_36/D4]
gi|392685770|gb|EIY79081.1| DNA (cytosine-5-)-methyltransferase [Bacteroides uniformis
CL03T12C37]
Length = 374
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVK---PPHMLFVENVVGFETSDTHAKMI 68
PCQP++ GL++ D R F I ++ + PP +LF+ENV G +T +
Sbjct: 89 PCQPFSIAGLRRGFEDTRGTLFFNIANIVKQKIDSGIPPKVLFLENVKGLKTHMKGETLK 148
Query: 69 EILANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRKPL 106
ILA D L + +L+ FGVP +R R F +A K +
Sbjct: 149 TILATLDELGYAYNYDVLNAKYFGVPQNRERLFIVAWYKDI 189
>gi|189096062|pdb|2UYH|A Chain A, Hhai Dna Methyltransferase S87q-Q237s Mutant Complex With
13mer Gcgc-Gmgc Oligonucleotide And Sah
Length = 327
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 113/309 (36%), Gaps = 73/309 (23%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ QG QK D+R F I ++ K P ++F+ENV F + D + +E++
Sbjct: 80 PCQAFSIQGKQKGFEDSRGTLFFDIARIVRE--KKPKVVFMENVKNFASHD-NGNTLEVV 136
Query: 72 ANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGN 127
N+ DY +L+ L +G+P R R + + R LN Q + P P N
Sbjct: 137 KNTMNELDYSFHAKVLNALDYGIPQKRERIYMICFRND-------LNIQNFQFPKPFELN 189
Query: 128 DDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAE 187
T + PD + L+ ++R D V T T
Sbjct: 190 ---TFVKDLLLPDSEVEHLV-----IDR-------KDLVMTNQEIEQTTPKT-------- 226
Query: 188 ETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQ 247
V L ++ + GS I S R T S Y G G T
Sbjct: 227 ---------------VRLGIVGKGGSGERIY---STRGIAITLSAY----GGGIFAKT-- 262
Query: 248 PKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPL 307
L R PRE A + +P ++ H S Q Y GNS VV +
Sbjct: 263 ------GGYLVNGKTRKLHPRECARVMGYPDSYKV--HPSTSQAYKQFGNS----VVINV 310
Query: 308 LQYLFAQAG 316
LQY+ G
Sbjct: 311 LQYIAYNIG 319
>gi|389581931|dbj|GAB64652.1| DNA (cytosine-5)-methyltransferase-like protein 2, partial
[Plasmodium cynomolgi strain B]
Length = 769
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 102/244 (41%), Gaps = 28/244 (11%)
Query: 27 DARAFSFLKILELIPHTVKP--PHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFILS 84
D R+ SF+ I L+ + P +F+ENV FE S + I + +Y Q ++LS
Sbjct: 287 DERSRSFIHICNLLKKVKEENLPKYIFIENVRNFELSTSFFYFINSVK-ENYNFQTYLLS 345
Query: 85 PLQFGVPYSRPRYFCLAKRKP-----LSFRC-------QLLNNQLLRSPSPLLGNDDMTV 132
PLQ+G+P R R++C+ +RK S+ C L +N L+ + + ++
Sbjct: 346 PLQYGIPNERLRFYCICRRKHNLVDLTSWECFPSGGTTPLYSNSLMPAKCIIPAFENNPN 405
Query: 133 ITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAE----E 188
+ L D E++ + ++N G L A +
Sbjct: 406 FRPSPKYSFYTPSLATFLDHNEKYPITCYTKGEINLTNGTLEEHEVANSTLTTCSSFCFD 465
Query: 189 TVEVDRCVSIDHFLVPLSLIER---------WGSAMDIVYPDSKRCCCFTKSYYRYVKGT 239
++++R ++ F +E+ G D++ + CFT +Y RY+ G+
Sbjct: 466 MIDINRNGNVCCFDGGRYYVEKSEAIKDLPNQGYLKDLINSNKLHSMCFTSNYGRYINGS 525
Query: 240 GSLL 243
GS+L
Sbjct: 526 GSVL 529
>gi|416389979|ref|ZP_11685428.1| putative modification methylase [Crocosphaera watsonii WH 0003]
gi|357264134|gb|EHJ13060.1| putative modification methylase [Crocosphaera watsonii WH 0003]
Length = 338
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 6/108 (5%)
Query: 5 HAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFET 60
H LL+ PCQP++ G + D R F I ++ + P+ +ENV VG
Sbjct: 87 HNLLLAGFPCQPFSICGKLQGFEDTRGTLFFDIARILDY--HKPYAFILENVKQLVGHNK 144
Query: 61 SDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 108
T ++EIL++ Y T+ +L+ L FG+P R R F + R PL+F
Sbjct: 145 GKTLNTILEILSDLGYYTEYKVLNALDFGLPQKRERIFIIGLRDPLNF 192
>gi|309807025|ref|ZP_07701007.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LactinV
03V1-b]
gi|308166645|gb|EFO68842.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LactinV
03V1-b]
Length = 336
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 111/305 (36%), Gaps = 70/305 (22%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQP++ G Q D+R F + ++ K P ++F+ENV F T D K I ++
Sbjct: 80 PCQPFSISGKQYGFEDSRGTLFFDVARIVKE--KRPKVVFLENVKNFATHDG-GKTIRVV 136
Query: 72 ANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGN 127
N+ Y Q +L+P+ +G+P R R + + R + +L P P N
Sbjct: 137 KNTMLELGYSFQFRVLNPINYGIPQKRERVYMVCFRNDIE-------RELFVFPQPFKLN 189
Query: 128 DDMTVITKHDQPDDS-WDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAA 186
+ PD+ D ++ D V D+VN ST
Sbjct: 190 ---RFVEDFLLPDNEVRDLIVNRTDLV--------LNDKVNINYNSPST----------- 227
Query: 187 EETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATV 246
+ + + + G I P + T S Y G G T
Sbjct: 228 ----------------IRVGTVGKGGQGERIYSP---KGIAITLSAY----GGGVFAKT- 263
Query: 247 QPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAP 306
L R PRE A + FP F+ H ++ Q Y LGNS+ + V+
Sbjct: 264 -------GGYLINGQTRRLHPRECARIMGFPDSFKL--HPNMNQAYKQLGNSVVVDVLQL 314
Query: 307 LLQYL 311
+ Q +
Sbjct: 315 ITQQI 319
>gi|83285959|ref|XP_729952.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23489206|gb|EAA21517.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 830
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 27 DARAFSFLKILELIPH--TVKPPHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFILS 84
D R +SF + L+ + P +F+ENV FE S + I + +Y Q ++LS
Sbjct: 396 DKRTYSFFHVCNLLKNMNVNSLPKYIFIENVKNFELSFSFLYFINSIK-DNYNFQTYLLS 454
Query: 85 PLQFGVPYSRPRYFCLAKRKP 105
PLQFG+P R R++C+ K+K
Sbjct: 455 PLQFGIPNERLRFYCICKKKS 475
>gi|309803758|ref|ZP_07697844.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LactinV
11V1-d]
gi|308164167|gb|EFO66428.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LactinV
11V1-d]
Length = 336
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 111/305 (36%), Gaps = 70/305 (22%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQP++ G Q D+R F + ++ K P ++F+ENV F T D K I ++
Sbjct: 80 PCQPFSISGKQYGFEDSRGTLFFDVARIVKE--KRPKVVFLENVKNFATHDG-GKTISVV 136
Query: 72 ANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGN 127
N+ Y Q +L+P+ +G+P R R + + R + +L P P N
Sbjct: 137 KNTMLELGYSFQFRVLNPINYGIPQKRERVYMVCFRNDIE-------RELFVFPQPFKLN 189
Query: 128 DDMTVITKHDQPDDS-WDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAA 186
+ PD+ D ++ D V D+VN ST
Sbjct: 190 ---RFVEDFLLPDNEVRDLIVNRTDLV--------LNDKVNINYNSPST----------- 227
Query: 187 EETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATV 246
+ + + + G I P + T S Y G G T
Sbjct: 228 ----------------IRVGTVGKGGQGERIYSP---KGIAITLSAY----GGGVFAKT- 263
Query: 247 QPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAP 306
L R PRE A + FP F+ H ++ Q Y LGNS+ + V+
Sbjct: 264 -------GGYLINGQTRRLHPRECARIMGFPDSFKL--HPNMNQAYKQLGNSVVVDVLQL 314
Query: 307 LLQYL 311
+ Q +
Sbjct: 315 ITQQI 319
>gi|406928102|gb|EKD63977.1| hypothetical protein ACD_51C00115G0004 [uncultured bacterium]
Length = 323
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFET---SDTHAKMI 68
PCQP++ GL+K D+R F + +I H P ++F+ENV GF+ +T +
Sbjct: 85 PCQPFSNAGLKKGFEDSRGTLFFDVSRIIKH--HKPKVVFLENVKGFKNHNKGNTFHIVK 142
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 109
E L N Y +L+ +GVP +R R + L + F+
Sbjct: 143 ETLENLGYKVYAEVLNAKDYGVPQNRERIYILGFLDDVDFK 183
>gi|423284632|ref|ZP_17263515.1| DNA (cytosine-5-)-methyltransferase [Bacteroides fragilis HMW 615]
gi|404579823|gb|EKA84536.1| DNA (cytosine-5-)-methyltransferase [Bacteroides fragilis HMW 615]
Length = 343
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 130/311 (41%), Gaps = 61/311 (19%)
Query: 12 PCQPYTRQGLQKQSSD-ARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKM 67
PCQP++ G ++ +D R F + ++ + KPP M+F+ENV G ++ D T +
Sbjct: 73 PCQPFSYAGEKQGFNDEVRGTLFFDVCRILEYH-KPP-MVFLENVKGLKSHDNGKTLQTV 130
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRC--QLLNNQLLRSPSPLL 125
++ L Y ILS L +G+P R R++C+A R + F + + +LR +
Sbjct: 131 LDTLKKLGYYPHWTILSSLDYGLPQKRERWYCVAFRTEVDFEWPKPVKGHPVLRDIIDMN 190
Query: 126 GNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGA 185
+ I K + D D + P +R ++ NS + NT+ G V F
Sbjct: 191 DRNPSLAIPKFEL--DRIDYHFANAKPGDR-IQHDNSKYKPNTK-----KGKYGVFSFQK 242
Query: 186 AEETVEVDRCVSIDHFLVP--LSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLL 243
A+ ++ H P + E + S +D +++
Sbjct: 243 ADGSLRF-------HVGDPAKTQIQEAFYSCLDTY--------------------ASTII 275
Query: 244 ATVQPK---NKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLS 300
A PK + K S L+ + L+ FP DF FP +S Q Y LGNS+S
Sbjct: 276 ANRTPKLWDIRRKLSVLESKRLQ-----------GFPDDFVFP--VSDAQAYKQLGNSVS 322
Query: 301 IAVVAPLLQYL 311
+ ++ ++ +
Sbjct: 323 VPIIVTIMNNM 333
>gi|445418183|ref|ZP_21434814.1| putative DNA (cytosine-5-)-methyltransferase [Acinetobacter sp.
WC-743]
gi|444760872|gb|ELW85301.1| putative DNA (cytosine-5-)-methyltransferase [Acinetobacter sp.
WC-743]
Length = 293
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQP+++ G +K D R F IL+++ K P F+ENV G D T + +
Sbjct: 84 PCQPFSQAGHKKGFEDVRGTLFFNILKIL--EAKQPKAYFLENVRGLLKHDDGRTFSIIK 141
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
E L N Y Q F++ +G+P RPR F +
Sbjct: 142 EKLENLGYTFQSFVVKSSDYGLPQHRPRLFMIG 174
>gi|416241717|ref|ZP_11632930.1| DNA-cytosine methyltransferase [Moraxella catarrhalis BC7]
gi|326571776|gb|EGE21785.1| DNA-cytosine methyltransferase [Moraxella catarrhalis BC7]
Length = 458
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 126/334 (37%), Gaps = 83/334 (24%)
Query: 4 AHAWLLSP-PCQPYTRQGLQKQSSD-ARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
+H LL+ PCQP++ G + D R F +L ++ + K P +ENV GF++
Sbjct: 179 SHDLLLAGFPCQPFSYSGKTEGFEDKTRGTLFFDVLRILEN--KQPKFALLENVKGFKSH 236
Query: 62 DTHAKM---IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLL 118
D M ++ L + Y T IL+ +GVP R R++C+A RK +N
Sbjct: 237 DKGKTMDIALKALDEAGYNTYWTILNSYDYGVPQFRERWYCVAIRKD-------SDNGRF 289
Query: 119 RSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTA 178
P N D T + D+ DK L + +F
Sbjct: 290 EFPK----NRDRTTKLRDIIESDNNDKSL----ILSKF---------------------- 319
Query: 179 AVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKG 238
E+DR I++ + ER + P +K+ + Y+K
Sbjct: 320 ------------EIDR---INYHFANCHINERVEHDNSMYAPYTKKG---KHGVFSYLKA 361
Query: 239 TGSLLATVQPKNKGKASSLKEQHLRYFTPREVAN-------------------LHSFPGD 279
G+L V K + L ++P +AN L F D
Sbjct: 362 DGALRFHVGDFAKTQIQEAFYASLDTYSPTIIANRVPKLWDIQRKLSVREALRLQGFNDD 421
Query: 280 FQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFA 313
F+F +S Q Y LGNS+++ V+ +L LFA
Sbjct: 422 FKFD--VSNAQAYKQLGNSVTVPVIQAILASLFA 453
>gi|425439307|ref|ZP_18819635.1| Cytosine-specific methyltransferase [Microcystis aeruginosa PCC
9717]
gi|389720490|emb|CCH95818.1| Cytosine-specific methyltransferase [Microcystis aeruginosa PCC
9717]
Length = 346
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQP++R G QK D+R + +IL + K P ++F+ENV V ++
Sbjct: 87 PCQPFSRAGQQKGWQDSRGLAIQEILRICHE--KKPKVIFLENVSNIVRLNQGQILKDIL 144
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 109
L +YL ++ F +P SRPR+F LA RK L +
Sbjct: 145 IQLKEINYLAFYAVIDSKYFQIPQSRPRFFLLAFRKDLGIK 185
>gi|159025987|emb|CAO87894.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 329
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 5/101 (4%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQP++R G QK D+R + +IL + K P ++F+ENV + + +IL
Sbjct: 70 PCQPFSRAGQQKGWQDSRGLAIQEILRICHE--KKPKVIFLENVSNIMRLNQGQILKDIL 127
Query: 72 ---ANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 109
+YL ++ F +P SRPR+F LA RK L +
Sbjct: 128 IQLKEINYLAFYAVIDSKYFQIPQSRPRFFLLAFRKDLGIK 168
>gi|390440209|ref|ZP_10228555.1| Cytosine-specific methyltransferase [Microcystis sp. T1-4]
gi|389836353|emb|CCI32681.1| Cytosine-specific methyltransferase [Microcystis sp. T1-4]
Length = 346
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQP++R G QK D+R + +IL + K P ++F+ENV V ++
Sbjct: 87 PCQPFSRAGQQKGWQDSRGLAIQEILRICHE--KKPKVIFLENVSNIVRLNQGQILKDIL 144
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 109
L +YL ++ F +P SRPR+F LA RK L +
Sbjct: 145 IQLKEINYLAFYAVIDSKYFQIPQSRPRFFLLAFRKDLGIK 185
>gi|425450655|ref|ZP_18830479.1| Cytosine-specific methyltransferase [Microcystis aeruginosa PCC
7941]
gi|389768406|emb|CCI06475.1| Cytosine-specific methyltransferase [Microcystis aeruginosa PCC
7941]
Length = 346
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQP++R G QK D+R + +IL + K P ++F+ENV V ++
Sbjct: 87 PCQPFSRAGQQKGWQDSRGLAIQEILRICHE--KKPKVIFLENVSNIVRLNQGQILKDIL 144
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 109
L +YL ++ F +P SRPR+F LA RK L +
Sbjct: 145 IQLKEINYLAFYAVIDSKYFQIPQSRPRFFLLAFRKDLGIK 185
>gi|443658652|ref|ZP_21132195.1| modification methylase HhaI [Microcystis aeruginosa DIANCHI905]
gi|159029905|emb|CAO90959.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443332886|gb|ELS47470.1| modification methylase HhaI [Microcystis aeruginosa DIANCHI905]
Length = 346
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 5/101 (4%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQP++R G QK D+R + +IL + K P ++F+ENV + + +IL
Sbjct: 87 PCQPFSRAGQQKGWQDSRGLAIQEILRICHE--KKPKVIFLENVSNIMRLNQGQILKDIL 144
Query: 72 ---ANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 109
+YL ++ F +P SRPR+F LA RK L +
Sbjct: 145 IQLKEINYLAFYAVIDSKYFQIPQSRPRFFLLAFRKDLGIK 185
>gi|425454475|ref|ZP_18834214.1| Cytosine-specific methyltransferase [Microcystis aeruginosa PCC
9807]
gi|389804864|emb|CCI15801.1| Cytosine-specific methyltransferase [Microcystis aeruginosa PCC
9807]
Length = 346
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 5/101 (4%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQP++R G QK D+R + +IL + K P ++F+ENV + + +IL
Sbjct: 87 PCQPFSRAGQQKGWQDSRGLAIQEILRICHE--KKPKVIFLENVSNILRLNQGQILKDIL 144
Query: 72 ---ANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 109
+YL ++ F +P SRPR+F LA RK L +
Sbjct: 145 IQLKGINYLAFYAVIDSKYFQIPQSRPRFFLLAFRKDLGIK 185
>gi|425460405|ref|ZP_18839886.1| Cytosine-specific methyltransferase [Microcystis aeruginosa PCC
9808]
gi|440755344|ref|ZP_20934546.1| modification methylase HhaI [Microcystis aeruginosa TAIHU98]
gi|389826918|emb|CCI22234.1| Cytosine-specific methyltransferase [Microcystis aeruginosa PCC
9808]
gi|440175550|gb|ELP54919.1| modification methylase HhaI [Microcystis aeruginosa TAIHU98]
Length = 346
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 5/101 (4%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQP++R G QK D+R + +IL + K P ++F+ENV + + +IL
Sbjct: 87 PCQPFSRAGQQKGWQDSRGLAIQEILRICHE--KKPKVIFLENVSNILRLNKGQILKDIL 144
Query: 72 ---ANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 109
+YL ++ F +P SRPR+F LA RK L +
Sbjct: 145 IQLKEINYLAFYAVIDSKYFQIPQSRPRFFLLAFRKDLGIK 185
>gi|156095147|ref|XP_001613609.1| DNA (cytosine-5)-methyltransferase-like protein 2 [Plasmodium vivax
Sal-1]
gi|148802483|gb|EDL43882.1| DNA (cytosine-5)-methyltransferase-like protein 2, putative
[Plasmodium vivax]
Length = 807
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 27 DARAFSFLKILELIPHTVKP--PHMLFVENVVGFETSDTHAKMIEILANSDYLTQEFILS 84
D R+ SF I L+ + P +F+ENV FE S + I + +Y Q ++LS
Sbjct: 305 DERSRSFFHICNLLKKVKEENLPKYIFIENVRNFELSSSFLYFINSVK-KNYNFQTYLLS 363
Query: 85 PLQFGVPYSRPRYFCLAKRKPLS 107
PLQ+G+P R R++C+ +RK S
Sbjct: 364 PLQYGIPNERLRFYCICRRKDKS 386
>gi|428776054|ref|YP_007167841.1| DNA-cytosine methyltransferase [Halothece sp. PCC 7418]
gi|428690333|gb|AFZ43627.1| DNA-cytosine methyltransferase [Halothece sp. PCC 7418]
Length = 333
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQP++ GL+K DAR F I ++I P ++F+ENV F T D T +
Sbjct: 92 PCQPFSNAGLKKGFEDARGTLFFDIAKII--EAHQPEIIFLENVKNFRTHDQGNTFKVVK 149
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
EI+ Y + + FGVP +R R + +A
Sbjct: 150 EIMEKLGYQVYAQVFNAKHFGVPQNRERIYIVA 182
>gi|418028740|ref|ZP_12667292.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
gi|354691423|gb|EHE91351.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
Length = 334
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQP++ G QK D R F I +I + P +L +ENV T D T KM
Sbjct: 79 PCQPFSMMGKQKGFDDERGTLFFTIQRIIELHEQQPKILVLENVKNLLTHDHGRTFKKMK 138
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
IL + Y+ +L+ +G+P +R R F +A
Sbjct: 139 SILEDLGYIVHAKVLNTSDYGLPQNRRRVFVVA 171
>gi|166366204|ref|YP_001658477.1| DNA cytosine methylase [Microcystis aeruginosa NIES-843]
gi|166088577|dbj|BAG03285.1| DNA cytosine methylase [Microcystis aeruginosa NIES-843]
Length = 346
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQP++R G QK D+R + +I+ + K P ++F+ENV V ++
Sbjct: 87 PCQPFSRAGQQKGWQDSRGLAIQEIIRICHE--KKPKVIFLENVSNIVRLNQGQILKDIL 144
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 109
L +YL ++ F +P SRPR+F LA RK L +
Sbjct: 145 IQLKEINYLAFYAVIDSKYFQIPQSRPRFFLLAFRKDLGIK 185
>gi|167648711|ref|YP_001686374.1| DNA-cytosine methyltransferase [Caulobacter sp. K31]
gi|167351141|gb|ABZ73876.1| DNA-cytosine methyltransferase [Caulobacter sp. K31]
Length = 375
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 71/164 (43%), Gaps = 33/164 (20%)
Query: 6 AWLLSPPCQPYT----RQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
AW S PCQ ++ R GLQ S A F F K++E + + P + VENVVG TS
Sbjct: 74 AWA-SSPCQDFSLAGARAGLQGGRSSA-FFGFWKLMEALNAEGRGPDTVVVENVVGLLTS 131
Query: 62 DTHAKMIEI---LANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS-------FRCQ 111
A + LA+ Y + +F VP SRPR F +A R P+ F+ +
Sbjct: 132 HGGADFTALCRALADQGYRFGALEIDAARF-VPQSRPRVFVVATRLPVGDLAGPSPFQTR 190
Query: 112 LLNNQLLRSPSPLLG-------------NDDMTVITKHDQPDDS 142
+ R P L G N D+T + +PDD+
Sbjct: 191 AVREAHARLPPDLQGLWTWWGVDAPPARNTDLTALL---EPDDA 231
>gi|422303759|ref|ZP_16391110.1| Cytosine-specific methyltransferase [Microcystis aeruginosa PCC
9806]
gi|389791274|emb|CCI12941.1| Cytosine-specific methyltransferase [Microcystis aeruginosa PCC
9806]
Length = 346
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQP++R G QK D+R + +IL + K P ++F+ENV V ++
Sbjct: 87 PCQPFSRAGQQKGWQDSRGLAIQEILRICHE--KKPKVIFLENVSNIVRLNKGQILKDIL 144
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 109
L +YL ++ F +P SRPR+F LA RK L +
Sbjct: 145 IQLKEINYLAFYAVIDSKYFQMPQSRPRFFLLAFRKDLGIK 185
>gi|172038109|ref|YP_001804610.1| putative modification methylase [Cyanothece sp. ATCC 51142]
gi|354556456|ref|ZP_08975751.1| DNA-cytosine methyltransferase [Cyanothece sp. ATCC 51472]
gi|171699563|gb|ACB52544.1| putative modification methylase [Cyanothece sp. ATCC 51142]
gi|353551668|gb|EHC21069.1| DNA-cytosine methyltransferase [Cyanothece sp. ATCC 51472]
Length = 344
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 6/108 (5%)
Query: 5 HAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFET 60
H LL+ PCQP++ G + D R F +I ++ + P+ +ENV VG
Sbjct: 87 HDLLLAGFPCQPFSICGKLEGFEDTRGTLFFEIARILDY--HKPYAFILENVKQLVGHNK 144
Query: 61 SDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 108
T +++IL++ Y T +L+ L FG+P R R F + R PL+F
Sbjct: 145 GKTLKTILKILSDLGYYTDYKVLNALNFGLPQKRERVFIVGFRDPLAF 192
>gi|399073745|ref|ZP_10750652.1| DNA-methyltransferase Dcm [Caulobacter sp. AP07]
gi|398041261|gb|EJL34333.1| DNA-methyltransferase Dcm [Caulobacter sp. AP07]
Length = 380
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 121/321 (37%), Gaps = 53/321 (16%)
Query: 6 AWLLSPPCQPYT----RQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
AW S PCQ ++ R GLQ S A F F K++E + + P + VENV G TS
Sbjct: 79 AWA-SSPCQDFSLAGARAGLQGGRSSA-FFGFWKLMEALSAEGRGPDTVVVENVTGLLTS 136
Query: 62 DTHAKMIEI---LANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS-------FRCQ 111
A + LA+ Y + +F P SRPR F +A R+P+ F+ +
Sbjct: 137 HGGADFTALCRALADQGYRFGALEIDAARF-TPQSRPRVFVVATRRPVDGLTGPSPFQTR 195
Query: 112 LLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETG 171
+ R P+ L G + D P L +P DQV T
Sbjct: 196 AVREAHARLPADLQG---LWTWWGVDAPPARNTDLAALLEP----------DDQVAWRT- 241
Query: 172 FLSTGTAAVDDFGAAEETVEVD-RCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTK 230
T + D A V+ R S + + R G V D C T
Sbjct: 242 --DAATQTLLDLMAPAHRAAVEARLASGQRAVGAVFRRMRGGQQRAEVRFDGLAGCLRTP 299
Query: 231 SYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQ 290
GS T+ + G+A S R TPRE A L P ++ P R
Sbjct: 300 R-------GGSSRQTLLVIDGGQARS------RLITPREGARLMGLPDTYRLP-----RS 341
Query: 291 RYALLGNSLSIAVVAPLLQYL 311
+ A L + + V AP++++L
Sbjct: 342 QTAGL-HVIGDGVAAPVVRWL 361
>gi|347533695|ref|YP_004841703.1| hypothetical protein LSA_1p00140 [Lactobacillus sanfranciscensis
TMW 1.1304]
gi|345505091|gb|AEN99771.1| hypothetical protein LSA_1p00140 [Lactobacillus sanfranciscensis
TMW 1.1304]
Length = 438
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 129/321 (40%), Gaps = 78/321 (24%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFET--SDTHAKMIE 69
PCQP++ G + + D R +L+++ +I K P ++ +ENV G + + +K+I+
Sbjct: 154 PCQPFSNAGNRLGTDDDRGNLYLELIRII--NAKNPKVVLMENVRGLLSIKNKDGSKLID 211
Query: 70 IL------ANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSP 123
+ A S Y +L +GVP +R R + RK L F+ + P P
Sbjct: 212 TIVYLLEHAASGYTVTYKLLRASDYGVPQNRYRVMIVGIRKDLGFKFEF--------PKP 263
Query: 124 L-LGNDDMTVITKHDQP------DDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTG 176
+ + D+TV + P D+ WD +S + V E
Sbjct: 264 IKVDPKDLTVEHAINIPEGTPNQDEVWDLSPQSQEIVNNIPE------------------ 305
Query: 177 TAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYV 236
G + + V D+ L ER + + + KR Y R+
Sbjct: 306 -------GKSWKAVPYDK------------LPER----LKKIRNNMKRYHS-PNMYRRFA 341
Query: 237 KG--TGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYAL 294
+ G++ A P++ G + R ++ RE+A + SFP D+ F S+ +Y +
Sbjct: 342 RNEINGTITAAATPEHSGIVHPTEN---RRYSVREIARIQSFPDDYVFVGD-SVSSKYKV 397
Query: 295 LGNSLSIAVVAPLLQYLFAQA 315
+GN+ V P L ++ A
Sbjct: 398 IGNA-----VPPKLAHVVGDA 413
>gi|309804726|ref|ZP_07698791.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LactinV
09V1-c]
gi|312871535|ref|ZP_07731628.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF
3008A-a]
gi|325913106|ref|ZP_08175476.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners UPII 60-B]
gi|308166118|gb|EFO68336.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LactinV
09V1-c]
gi|311092930|gb|EFQ51281.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF
3008A-a]
gi|325477527|gb|EGC80669.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners UPII 60-B]
Length = 336
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 111/305 (36%), Gaps = 70/305 (22%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQP++ G Q D+R F + ++ K P ++F+ENV F T D K I ++
Sbjct: 80 PCQPFSISGKQYGFEDSRGTLFFDVARIVKE--KRPKVVFLENVKNFATHDG-GKTISVV 136
Query: 72 ANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGN 127
N+ Y Q +L+P+ +G+P R R + + R + +L P P N
Sbjct: 137 KNTMLELGYSFQFRVLNPINYGIPQKRERVYMVCFRNDIE-------RELFVFPQPFKLN 189
Query: 128 DDMTVITKHDQPDDS-WDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAA 186
+ PD+ D ++ D V D+VN ST
Sbjct: 190 ---RFVEDFLLPDNEVRDLIVNRTDLV--------LNDKVNINYNSPST----------- 227
Query: 187 EETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATV 246
+ + + + G I P + T S Y G G T
Sbjct: 228 ----------------IRVGTVGKGGQGERIYSP---KGIAITLSAY----GGGVFAKT- 263
Query: 247 QPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAP 306
L R PRE A + FP F+ + ++ Q Y LGNS+ + V+
Sbjct: 264 -------GGYLINGQTRRLHPRECARIMGFPDSFKL--NPNMNQAYKQLGNSVVVDVLQL 314
Query: 307 LLQYL 311
+ Q +
Sbjct: 315 ITQQI 319
>gi|420201801|ref|ZP_14707397.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
NIHLM018]
gi|394270279|gb|EJE14798.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
NIHLM018]
Length = 396
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 105/304 (34%), Gaps = 73/304 (24%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQ ++ GL+K D R F I ++ K P +ENV + D T + +I
Sbjct: 156 PCQAFSLAGLKKGFDDTRGTLFFDIARVLNE--KRPKAFLLENVKNLRSHDKGKTFSIII 213
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGND 128
L +Y +L FG P +R R + + K + + N+ R P+P
Sbjct: 214 NTLNELNYEVHTAVLKSTDFGCPQNRERIYIVGFDKNI-----IKNSADFRFPTPC---- 264
Query: 129 DMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAEE 188
WDK L + + D+ T + L G A +
Sbjct: 265 -------------KWDKTLSNI--------LQKNVDEKYTISDKLWLGHQRRKKEHAKKG 303
Query: 189 TVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQP 248
G + SK + YY+ GS + QP
Sbjct: 304 N----------------------GFGYSLFNEKSKYTNTLSARYYK----DGSEILIEQP 337
Query: 249 KNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLL 308
Q+ R TPRE A L FP +F P +S Q Y GNS+S+ V+ +
Sbjct: 338 ----------NQNPRKITPREAARLQGFPENFIIP--VSDTQAYKQFGNSVSVPVIKSIA 385
Query: 309 QYLF 312
+ +
Sbjct: 386 KNIL 389
>gi|359403347|ref|ZP_09196253.1| cytosine-specific DNA modification methyltransferase [Spiroplasma
melliferum KC3]
gi|438120350|ref|ZP_20871945.1| DNA-methyltransferase [Spiroplasma melliferum IPMB4A]
gi|358832410|gb|EHK51684.1| cytosine-specific DNA modification methyltransferase [Spiroplasma
melliferum KC3]
gi|434155144|gb|ELL44119.1| DNA-methyltransferase [Spiroplasma melliferum IPMB4A]
Length = 404
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQP+++ G QK +D R F +I+ ++ K P L +ENV V + +T+ +
Sbjct: 73 PCQPFSKGGFQKGFNDTRGALFFEIVRIL--QAKKPIFLLLENVSNLVSHDNGNTYRVIT 130
Query: 69 EILANSDYL--TQEFILSPLQFGVPYSRPRYFCLAKRKPLS 107
E L Y+ ++ +L+P G+P R R + RK LS
Sbjct: 131 EELTRLGYIFPSKPLVLTPTDIGIPMHRKRIYIPGIRKDLS 171
>gi|1171048|sp|P25263.2|MTC1_HERAU RecName: Full=Modification methylase HgiCI; Short=M.HgiCI; AltName:
Full=Cytosine-specific methyltransferase HgiCI
gi|515372|emb|CAA38933.1| methyltransferase [Herpetosiphon aurantiacus]
Length = 420
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 133/346 (38%), Gaps = 47/346 (13%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQP++ G QK D R F +I E I +P L +ENV G T D IL
Sbjct: 74 PCQPFSYAGKQKGFGDTRGTLFFEI-ERILKAYRPKGFL-LENVRGLTTHDKGRTFKTIL 131
Query: 72 ANSDYLTQE--FILSPLQFGVPYSRPRYFC--LAKRKPL-----------SFRCQLLNNQ 116
L IL+ F VP +R R + L + +P S + + L+NQ
Sbjct: 132 QKLHELNYGVYLILNSSNFQVPQNRLRVYIVGLDQSQPELTITSHIGATDSHKFKQLSNQ 191
Query: 117 --LLRSPSPLLGNDDMTV--ITKHDQPDDSWDKLLESCD-PVE----RFLEFSNSGDQVN 167
L + +L D + + K++ D +KLL P++ R +++ N +
Sbjct: 192 ASLFDTNKIMLVRDILEDHPLDKYNCSTDFVNKLLAFIGHPIKLNGKRLIDYRNGNSIHS 251
Query: 168 TETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCC 227
E G T+ F A + L+ IE+ + + DS
Sbjct: 252 WELGIKGECTSDEIQFMNALIANRRKKHFGAHQDGKKLT-IEQIKTFFEHDDLDSIMQSL 310
Query: 228 FTKSYYRYVKGT------------------GSLLATVQPKNKGKASSLKEQHLRYFTPRE 269
TK Y + V G S+ T+ + K + + +R TPRE
Sbjct: 311 ITKGYLQEVNGRFNPVAGNMSFEVFKFLDPDSVSITLVSSDAHKIGVVHQNRIRRITPRE 370
Query: 270 VANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQA 315
A L FP FQF SL Y GNS+S+ VV ++ LF A
Sbjct: 371 CARLQGFPDSFQFHPKDSL--AYRQFGNSVSVPVVKAVILDLFKSA 414
>gi|380694454|ref|ZP_09859313.1| DNA-cytosine methyltransferase [Bacteroides faecis MAJ27]
Length = 343
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 130/311 (41%), Gaps = 61/311 (19%)
Query: 12 PCQPYTRQGLQKQSSD-ARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKM 67
PCQP++ G ++ +D R F + ++ + KPP M+F+ENV G ++ D T +
Sbjct: 73 PCQPFSYAGEKQGFNDEVRGTLFFDVCRILEYH-KPP-MVFLENVKGLKSHDKGKTLQTV 130
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRC--QLLNNQLLRSPSPLL 125
++ L Y ILS L +G+P R R++C+A R + F + + +LR +
Sbjct: 131 LDTLKKLGYYPHWTILSSLDYGLPQKRERWYCVAFRTDVDFEWPKPIKGHPVLRDIIEMN 190
Query: 126 GNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGA 185
+ I+K + D D + P +R ++ NS + NT+ G V F
Sbjct: 191 DRNPSLAISKFEL--DRIDYHFANAKPGDR-IQHDNSKYKPNTK-----KGKYGVFSFQK 242
Query: 186 AEETVEVDRCVSIDHFLVP--LSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLL 243
+ ++ H P + E + S +D +++
Sbjct: 243 TDGSLRF-------HVGDPAKTQIQEAFYSCLDTY--------------------ASTII 275
Query: 244 ATVQPK---NKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLS 300
A PK + K S L+ + ++ F P DF FP +S Q Y LGNS+S
Sbjct: 276 ANRTPKLWDIRRKLSVLESKRIQGF-----------PDDFVFP--VSDAQAYKQLGNSVS 322
Query: 301 IAVVAPLLQYL 311
+ ++ ++ +
Sbjct: 323 VPIIVKIMNNM 333
>gi|153870185|ref|ZP_01999636.1| C-5 cytosine-specific DNA methylase [Beggiatoa sp. PS]
gi|152073352|gb|EDN70367.1| C-5 cytosine-specific DNA methylase [Beggiatoa sp. PS]
Length = 235
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 66/154 (42%), Gaps = 16/154 (10%)
Query: 5 HAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD- 62
H LL PCQ ++ G QK SD R F I E++ +K P+ +ENV + D
Sbjct: 64 HNILLGGFPCQAFSICGNQKGFSDTRGTLFFNIEEIL--RIKKPYAFMLENVKNLRSHDK 121
Query: 63 --THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRS 120
T ++E L N Y IL+ L FG+P R R + ++ ++F
Sbjct: 122 GRTFKILLEHLENLGYSVHHTILNSLDFGIPQKRERTIIVGFQENIAFSF---------- 171
Query: 121 PSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVE 154
P PL D+T I + D + LL S E
Sbjct: 172 PKPLGIKPDLTKILEKDSEVEKNILLLMSLKKRE 205
>gi|387773675|ref|ZP_10128965.1| modification methylase HhaI [Haemophilus parahaemolyticus HK385]
gi|127455|sp|P05102.1|MTH1_HAEPH RecName: Full=Modification methylase HhaI; Short=M.HhaI; AltName:
Full=Cytosine-specific methyltransferase HhaI
gi|1065144|pdb|1MHT|A Chain A, Covalent Ternary Structure Of Hhai Methyltransferase, Dna
And S-Adenosyl-L-Homocysteine
gi|1942412|pdb|3MHT|A Chain A, Ternary Structure Of Hhai Methyltransferase With
Unmodified Dna And Adohcy
gi|1942415|pdb|4MHT|A Chain A, Ternary Structure Of Hhai Methyltransferase With Native
Dna And Adohcy
gi|2392799|pdb|5MHT|A Chain A, Ternary Structure Of Hhai Methyltransferase With
Hemimethylated Dna And Adohcy
gi|3660437|pdb|6MHT|A Chain A, Ternary Structure Of Hhai Methyltransferase With Adohcy
And Dna Containing 4'-Thio-2'deoxycytidine At The Target
gi|4139672|pdb|7MHT|A Chain A, Cytosine-Specific Methyltransferase HhaiDNA COMPLEX
gi|4139675|pdb|8MHT|A Chain A, Cytosine-Specific Methyltransferase HhaiDNA COMPLEX
gi|4139680|pdb|9MHT|A Chain A, Cytosine-specific Methyltransferase Hhai/dna Complex
gi|4558252|pdb|10MH|A Chain A, Ternary Structure Of Hhai Methyltransferase With Adohcy
And Hemimethylated Dna Containing
5,6-Dihydro-5-Azacytosine At The Target
gi|4699814|pdb|2HMY|B Chain B, Binary Complex Of Hhai Methyltransferase With Adomet
Formed In The Presence Of A Short Nonpsecific Dna
Oligonucleotide
gi|24158912|pdb|1M0E|A Chain A, Zebularine: A Novel Dna Methylation Inhibitor That Forms A
Covalent Complex With Dna Methyltransferase
gi|52695513|pdb|1SKM|A Chain A, Hhai Methyltransferase In Complex With Dna Containing An
Abasic South Carbocyclic Sugar At Its Target Site
gi|85544385|pdb|2C7O|A Chain A, Hhai Dna Methyltransferase Complex With 13mer
Oligonucleotide Containing 2-Aminopurine Adjacent To The
Target Base (Pcgc:gmgc) And Sah
gi|85544388|pdb|2C7P|A Chain A, Hhai Dna Methyltransferase Complex With Oligonucleotide
Containing 2-Aminopurine Opposite To The Target Base (
Gcgc:gmpc) And Sah
gi|85544391|pdb|2C7Q|A Chain A, Hhai Dna Methyltransferase Complex With Oligonucleotide
Containing 2-Aminopurine Outside The Recognition
Sequence (Paired With G) And Sah
gi|116667789|pdb|2HR1|A Chain A, Ternary Structure Of Wt M.hhai C5-cytosine Dna
Methyltransferase With Unmodified Dna And Adohcy
gi|157831356|pdb|1HMY|A Chain A, Crystal Structure Of The Hhai Dna Methyltransferase
Complexed With S- Adenosyl-L-Methionine
gi|290560089|pdb|3EEO|A Chain A, M. Hhai Co-Crystallized With Synthetic Dsdna Containing A
Propane Diol In Place Of The Deoxycytidine Residue
Targeted For Methylation.
gi|148949|gb|AAA24989.1| DNA methylase [Haemophilus haemolyticus]
gi|386904416|gb|EIJ69210.1| modification methylase HhaI [Haemophilus parahaemolyticus HK385]
Length = 327
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 111/309 (35%), Gaps = 73/309 (23%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G QK D+R F I ++ K P ++F+ENV F + D + +E++
Sbjct: 80 PCQAFSISGKQKGFEDSRGTLFFDIARIVRE--KKPKVVFMENVKNFASHD-NGNTLEVV 136
Query: 72 ANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGN 127
N+ DY +L+ L +G+P R R + + R LN Q + P P N
Sbjct: 137 KNTMNELDYSFHAKVLNALDYGIPQKRERIYMICFRND-------LNIQNFQFPKPFELN 189
Query: 128 DDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAE 187
T + PD + L+ ++R D V T T
Sbjct: 190 ---TFVKDLLLPDSEVEHLV-----IDR-------KDLVMTNQEIEQTTPKT-------- 226
Query: 188 ETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQ 247
V L ++ + G I S R T S Y G G T
Sbjct: 227 ---------------VRLGIVGKGGQGERIY---STRGIAITLSAY----GGGIFAKT-- 262
Query: 248 PKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPL 307
L R PRE A + +P ++ H S Q Y GNS VV +
Sbjct: 263 ------GGYLVNGKTRKLHPRECARVMGYPDSYKV--HPSTSQAYKQFGNS----VVINV 310
Query: 308 LQYLFAQAG 316
LQY+ G
Sbjct: 311 LQYIAYNIG 319
>gi|374598198|ref|ZP_09671200.1| DNA-cytosine methyltransferase [Myroides odoratus DSM 2801]
gi|423326546|ref|ZP_17304362.1| DNA (cytosine-5-)-methyltransferase [Myroides odoratimimus CIP
103059]
gi|373909668|gb|EHQ41517.1| DNA-cytosine methyltransferase [Myroides odoratus DSM 2801]
gi|404603010|gb|EKB02690.1| DNA (cytosine-5-)-methyltransferase [Myroides odoratimimus CIP
103059]
Length = 423
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 128/334 (38%), Gaps = 65/334 (19%)
Query: 7 WLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---T 63
++ SPPCQ ++ G +K D R F E I KP + +F ENV G + D T
Sbjct: 119 YMTSPPCQAFSLAGKRKGEEDKRGVLFYNSHEFIQKN-KPRYFIF-ENVKGLLSDDGGKT 176
Query: 64 HAKMIEILANSD---------------YLTQEFILSPLQFGVPYSRPRYFCLAKR----K 104
+ I+ L Y +L+ +GVP +R R F + R
Sbjct: 177 FQRWIDFLGGKSVNGNPVIFPHEESVPYHIYYKVLNAKNYGVPQNRERIFIVGIRDDQDN 236
Query: 105 PLSFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGD 164
SF ++ +L + +L D +K S ++ F+ +
Sbjct: 237 NFSFPVEI---ELKKRLKDIL-------------ETDVDEKYFLSDKLIDFFISHTEKHK 280
Query: 165 QVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLS-------LIERWGSAMDI 217
Q F ++ + VD D+++ S + E +++
Sbjct: 281 QKGNGFSFKPKDIESIGQAVTTKAGTRVD-----DNYIYVKSANSKGYEIAEEEEDSINF 335
Query: 218 VYPDSKRCCCFTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFP 277
+P+S+ R KG L T N+G S+L +R TPRE L FP
Sbjct: 336 EHPNSETRRG------RVGKGVAQTLTT--SCNQGIYSNL---MIRKLTPRECFRLMDFP 384
Query: 278 GDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYL 311
F++ ++S Q Y GNS+ +AV+A ++Q L
Sbjct: 385 DSFKW--NVSDSQAYKQAGNSIVVAVLAAIIQKL 416
>gi|67922277|ref|ZP_00515790.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501]
gi|67855853|gb|EAM51099.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501]
Length = 226
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 6/108 (5%)
Query: 5 HAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFET 60
H LL+ PCQ ++ G + D R F I ++ + P+ +ENV VG
Sbjct: 87 HNLLLAGFPCQTFSICGKLQGFEDTRGTLFFDIARVLDY--HKPYAFILENVKQLVGHNK 144
Query: 61 SDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 108
T ++EIL++ Y T+ +L+ L FG+P R R F + R PL+F
Sbjct: 145 GKTLNTILEILSDLGYYTEYKVLNALDFGLPQKRERIFIIGLRDPLNF 192
>gi|312872570|ref|ZP_07732638.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF
2062A-h1]
gi|311091932|gb|EFQ50308.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF
2062A-h1]
Length = 336
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQP++ G Q D+R F + ++ K P ++F+ENV F T D K I ++
Sbjct: 80 PCQPFSISGKQYGFEDSRGTLFFDVARIVKE--KRPKVVFLENVKNFATHDG-GKTISVV 136
Query: 72 ANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 106
N+ Y Q +L+P+ +G+P R R + + R +
Sbjct: 137 KNTMLELGYSFQFRVLNPINYGIPQKRERVYMVCFRNDI 175
>gi|259500984|ref|ZP_05743886.1| modification methylase EcoRII [Lactobacillus iners DSM 13335]
gi|302190566|ref|ZP_07266820.1| DNA-cytosine methyltransferase [Lactobacillus iners AB-1]
gi|259167678|gb|EEW52173.1| modification methylase EcoRII [Lactobacillus iners DSM 13335]
Length = 336
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQP++ G Q D+R F + ++ K P ++F+ENV F T D K I ++
Sbjct: 80 PCQPFSISGKQYGFEDSRGTLFFDVARIVKE--KRPKVVFLENVKNFATHDG-GKTIRVV 136
Query: 72 ANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 106
N+ Y Q +L+P+ +G+P R R + + R +
Sbjct: 137 KNTMLELGYSFQFRVLNPINYGIPQKRERVYMVCFRNDI 175
>gi|50513617|pdb|1SVU|A Chain A, Structure Of The Q237w Mutant Of Hhai Dna
Methyltransferase: An Insight Into Protein-Protein
Interactions
gi|50513618|pdb|1SVU|B Chain B, Structure Of The Q237w Mutant Of Hhai Dna
Methyltransferase: An Insight Into Protein-Protein
Interactions
Length = 327
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 7/102 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G QK D+R F I ++ K P ++F+ENV F + D + +E++
Sbjct: 80 PCQAFSISGKQKGFEDSRGTLFFDIARIVRE--KKPKVVFMENVKNFASHD-NGNTLEVV 136
Query: 72 ANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 109
N+ DY +L+ L +G+P R R + + R L+ +
Sbjct: 137 KNTMNELDYSFHAKVLNALDYGIPQKRERIYMICFRNDLNIQ 178
>gi|315653956|ref|ZP_07906872.1| modification methylase EcoRII [Lactobacillus iners ATCC 55195]
gi|315488652|gb|EFU78298.1| modification methylase EcoRII [Lactobacillus iners ATCC 55195]
Length = 336
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQP++ G Q D+R F + ++ K P ++F+ENV F T D K I ++
Sbjct: 80 PCQPFSISGKQYGFEDSRGTLFFDVARIVKE--KRPKVVFLENVKNFATHDG-GKTIRVV 136
Query: 72 ANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 107
N+ Y Q +L+P+ +G+P R R + + R +
Sbjct: 137 KNTMLELGYSFQFRVLNPINYGIPQKRERVYMVCFRNDIK 176
>gi|12084381|pdb|1FJX|A Chain A, Structure Of Ternary Complex Of Hhai Methyltransferase
Mutant (T250g) In Complex With Dna And Adohcy
gi|85544394|pdb|2C7R|A Chain A, Hhai Dna Methyltransferase (T250g Mutant) Complex With
Oligonucleotide Containing 2-Aminopurine As A Target
Base (Gpgc:gmgc) And Sah
Length = 327
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 7/102 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G QK D+R F I ++ K P ++F+ENV F + D + +E++
Sbjct: 80 PCQAFSISGKQKGFEDSRGTLFFDIARIVRE--KKPKVVFMENVKNFASHD-NGNTLEVV 136
Query: 72 ANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 109
N+ DY +L+ L +G+P R R + + R L+ +
Sbjct: 137 KNTMNELDYSFHAKVLNALDYGIPQKRERIYMICFRNDLNIQ 178
>gi|325912401|ref|ZP_08174796.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners UPII
143-D]
gi|325475743|gb|EGC78914.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners UPII
143-D]
Length = 336
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQP++ G Q D+R F + ++ K P ++F+ENV F T D K I ++
Sbjct: 80 PCQPFSISGKQYGFEDSRGTLFFDVARIVKE--KRPKVVFLENVKNFATHDG-GKTISVV 136
Query: 72 ANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 106
N+ Y Q +L+P+ +G+P R R + + R +
Sbjct: 137 KNTMLELGYSFQFRVLNPINYGIPQKRERVYMVCFRNDI 175
>gi|312874943|ref|ZP_07734962.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF
2053A-b]
gi|311089688|gb|EFQ48113.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF
2053A-b]
Length = 336
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQP++ G Q D+R F + ++ K P ++F+ENV F T D K I ++
Sbjct: 80 PCQPFSISGKQYGFEDSRGTLFFDVARIVKE--KRPKVVFLENVKNFATHDG-GKTIRVV 136
Query: 72 ANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 107
N+ Y Q +L+P+ +G+P R R + + R +
Sbjct: 137 KNTMLELGYSFQFRVLNPINYGIPQKRERVYMVCFRNDIK 176
>gi|312874304|ref|ZP_07734336.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF
2052A-d]
gi|311090177|gb|EFQ48589.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF
2052A-d]
Length = 336
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQP++ G Q D+R F + ++ K P ++F+ENV F T D K I ++
Sbjct: 80 PCQPFSISGKQYGFEDSRGTLFFDVARIVKE--KRPKVVFLENVKNFATHDG-GKTIRVV 136
Query: 72 ANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 106
N+ Y Q +L+P+ +G+P R R + + R +
Sbjct: 137 KNTMLELGYSFQFRVLNPINYGIPQKRERVYMVCFRNDI 175
>gi|309809622|ref|ZP_07703479.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners SPIN
2503V10-D]
gi|308170103|gb|EFO72139.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners SPIN
2503V10-D]
Length = 336
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQP++ G Q D+R F + ++ K P ++F+ENV F T D K I ++
Sbjct: 80 PCQPFSISGKQYGFEDSRGTLFFDVARIVKE--KRPKVVFLENVKNFATHDG-GKTISVV 136
Query: 72 ANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 106
N+ Y Q +L+P+ +G+P R R + + R +
Sbjct: 137 KNTMLELGYSFQFRVLNPINYGIPQKRERVYMVCFRNDI 175
>gi|402300660|ref|ZP_10820134.1| DNA-cytosine methyltransferase [Bacillus alcalophilus ATCC 27647]
gi|401724193|gb|EJS97577.1| DNA-cytosine methyltransferase [Bacillus alcalophilus ATCC 27647]
Length = 349
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQP++ G ++ D R F + ++ H P ++F+ENV F T D T +
Sbjct: 82 PCQPFSISGKRQGFEDTRGTLFFDVARIVKH--HQPKLVFMENVRNFATHDQGNTLNTVR 139
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 106
E L Y +L+ QFG+P +R R + +A RK L
Sbjct: 140 ETLEQIGYKFWHQVLNASQFGLPQNRERIYMVAIRKDL 177
>gi|319407456|emb|CBI81106.1| Cytosine-specific methyltransferase NlaX [Bartonella sp. 1-1C]
Length = 307
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 5 HAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFET 60
H LL+ PCQP+++ GL+K +DAR F I ++ H + P +ENV G +
Sbjct: 67 HDILLAGFPCQPFSQAGLKKGFADARGTLFFDINRILSH--RKPRAFLLENVKQLKGHDK 124
Query: 61 SDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
T ++++E L S Y IL FGVP +R R + +
Sbjct: 125 GRTLSRIVEHLQLSGYKVFYDILKARDFGVPQNRERIYIVG 165
Score = 37.4 bits (85), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 263 RYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPL 307
R TPRE A L FP +Q P +S Q Y GNS+S+ V+ +
Sbjct: 257 RKLTPREAARLQGFPESYQIP--VSDAQAYRQFGNSVSVPVIKAI 299
>gi|427713414|ref|YP_007062038.1| DNA-methyltransferase Dcm [Synechococcus sp. PCC 6312]
gi|427377543|gb|AFY61495.1| DNA-methyltransferase Dcm [Synechococcus sp. PCC 6312]
Length = 323
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 5/100 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQP++ G K D+R F +I ++ K P +ENV VG T +++
Sbjct: 76 PCQPFSICGDLKGFEDSRGTLFFEIARILRE--KRPVAFVLENVKQLVGHNHGKTLRRIL 133
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 108
+IL Y +L+ L FG+P+ R R F + R+P +F
Sbjct: 134 DILHEIGYFADYKVLNGLDFGIPHKRERIFIVGFREPYNF 173
>gi|329920363|ref|ZP_08277095.1| modification methylase HhaI [Lactobacillus iners SPIN 1401G]
gi|328936039|gb|EGG32492.1| modification methylase HhaI [Lactobacillus iners SPIN 1401G]
Length = 336
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQP++ G Q D+R F + ++ K P ++F+ENV F T D K I ++
Sbjct: 80 PCQPFSISGKQYGFEDSRGTLFFDVARIVKE--KRPKVVFLENVKNFATHDG-GKTISVV 136
Query: 72 ANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 106
N+ Y Q +L+P+ +G+P R R + + R +
Sbjct: 137 KNTMLELGYSFQFRVLNPINYGIPQKRERVYMVCFRNDV 175
>gi|349611852|ref|ZP_08891082.1| modification methylase HhaI [Lactobacillus sp. 7_1_47FAA]
gi|348608317|gb|EGY58302.1| modification methylase HhaI [Lactobacillus sp. 7_1_47FAA]
Length = 336
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQP++ G Q D+R F + ++ K P ++F+ENV F T D K I ++
Sbjct: 80 PCQPFSISGKQYGFEDSRGTLFFDVARIVKE--KRPKVVFLENVKNFATHDG-GKTISVV 136
Query: 72 ANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 106
N+ Y Q +L+P+ +G+P R R + + R +
Sbjct: 137 KNTMLELGYSFQFRVLNPINYGIPQKRERVYMVCFRNDV 175
>gi|451980761|ref|ZP_21929147.1| Cytosine-specific methyltransferase (modular protein) [Nitrospina
gracilis 3/211]
gi|451762097|emb|CCQ90386.1| Cytosine-specific methyltransferase (modular protein) [Nitrospina
gracilis 3/211]
Length = 463
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 131/307 (42%), Gaps = 57/307 (18%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMI--E 69
PCQP++ G +K D R + LE++ +KP ++F ENV G + T K++ E
Sbjct: 159 PCQPFSNAGSRKGIKDKRGTLYQTALEVV-EELKPRAVVF-ENVRGLLSFKTEKKLLIEE 216
Query: 70 ILANSDYLTQEFILSPL---QFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLG 126
I + D+L + + S + + VP R R F + + N P+P+
Sbjct: 217 ICEHLDFLGYDVLFSLVDASKHHVPQKRLRVFMVGIERAKK-------NGRFSFPAPVER 269
Query: 127 NDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAA 186
ND + KH +L+ C + N + + + G+ + G +
Sbjct: 270 ND---LTLKHT--------ILDICQNTQ------NQQELIQLNPQAIHIGSMVPE--GGS 310
Query: 187 EETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATV 246
+++ ++ L ER D + + R F + ++R + G++ A
Sbjct: 311 WKSIPYEK------------LPERLKKIADNM--EKYRWPNFYRRFHRN-EVAGTITAAF 355
Query: 247 QPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAP 306
+P+N G L++ R F+ RE+A + SFP F+F +++ +Y +GN+ V P
Sbjct: 356 KPENAGVWHPLEQ---RVFSVREIARIQSFPDWFRFEGR-NIKSKYQQIGNA-----VPP 406
Query: 307 LLQYLFA 313
L Y A
Sbjct: 407 RLAYELA 413
>gi|383124600|ref|ZP_09945263.1| DNA (cytosine-5-)-methyltransferase [Bacteroides sp. 1_1_6]
gi|251841245|gb|EES69326.1| DNA (cytosine-5-)-methyltransferase [Bacteroides sp. 1_1_6]
Length = 448
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 6/95 (6%)
Query: 12 PCQPYTRQGLQKQSSDA--RAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHA--KM 67
PCQP+++ G Q+ +D R F KI+E++ P +F+ENV +T D H +
Sbjct: 73 PCQPFSKAGKQEGFNDQQDRGNLFYKIMEIL--EFHKPEYVFLENVSNLKTHDNHNTYHV 130
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK 102
I +S Y Q+ I+SP FGVP R R + + +
Sbjct: 131 IYEKLSSLYDVQDAIISPHYFGVPQHRNRIYIVGR 165
>gi|150026305|ref|YP_001297131.1| Type II modification methyltransferase HpaII [Flavobacterium
psychrophilum JIP02/86]
gi|149772846|emb|CAL44330.1| Type II modification methyltransferase HpaII [Flavobacterium
psychrophilum JIP02/86]
Length = 425
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 111/299 (37%), Gaps = 64/299 (21%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G + D R F + E+I P +F+ENV G + D K +E +
Sbjct: 165 PCQAFSIAGKRGGFDDTRGTLFFDVAEIIKK--HKPKAIFLENVKGLRSHD-KGKTLETI 221
Query: 72 AN------SDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLL 125
N Y+ + +++ FGVP +R R + + R Q LN P PL
Sbjct: 222 LNVLRNDLGYYVPEPQVVNAKNFGVPQNRERIYIVGFR-------QDLNISSFEYPEPLE 274
Query: 126 GNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGA 185
N + + P P + +L +N + S G FG
Sbjct: 275 NNPTFESVKEKLVP------------PTKYYLSTQYVQTLINHKARHASKGNG----FGY 318
Query: 186 AEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLAT 245
A + D+ + ++ G ++V R +T + ++KGT
Sbjct: 319 A---------IIPDNGIANAIVVGGMGRERNLVL--DHRITDYTPT--THIKGT------ 359
Query: 246 VQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVV 304
+ + +R TPRE A L FP D+ P ++ Y GNS+++ +
Sbjct: 360 -----------VNREGIRKMTPREWARLQGFPDDYIIP--VADASAYKQFGNSVAVPAI 405
>gi|309808410|ref|ZP_07702309.1| putative modification methylase HhaI [Lactobacillus iners LactinV
01V1-a]
gi|308168238|gb|EFO70357.1| putative modification methylase HhaI [Lactobacillus iners LactinV
01V1-a]
Length = 198
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQP++ G Q D+R F + ++ K P ++F+ENV F T D K I ++
Sbjct: 80 PCQPFSISGKQYGFEDSRGTLFFDVARIVKE--KRPKVVFLENVKNFATHDG-GKTISVV 136
Query: 72 ANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 107
N+ Y Q +L+P+ +G+P R R + + R +
Sbjct: 137 KNTMLELGYSFQFSVLNPINYGIPQKRERVYMVCFRNDIE 176
>gi|161761159|pdb|2ZCJ|A Chain A, Ternary Structure Of The Glu119gln M.Hhai, C5-Cytosine Dna
Methyltransferase, With Unmodified Dna And Adohcy
Length = 327
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 111/309 (35%), Gaps = 73/309 (23%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G QK D+R F I ++ K P ++F++NV F + D + +E++
Sbjct: 80 PCQAFSISGKQKGFEDSRGTLFFDIARIVRE--KKPKVVFMQNVKNFASHD-NGNTLEVV 136
Query: 72 ANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGN 127
N+ DY +L+ L +G+P R R + + R LN Q + P P N
Sbjct: 137 KNTMNELDYSFHAKVLNALDYGIPQKRERIYMICFRND-------LNIQNFQFPKPFELN 189
Query: 128 DDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAE 187
T + PD + L+ ++R D V T T
Sbjct: 190 ---TFVKDLLLPDSEVEHLV-----IDR-------KDLVMTNQEIEQTTPKT-------- 226
Query: 188 ETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQ 247
V L ++ + G I S R T S Y G G T
Sbjct: 227 ---------------VRLGIVGKGGQGERIY---STRGIAITLSAY----GGGIFAKT-- 262
Query: 248 PKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPL 307
L R PRE A + +P ++ H S Q Y GNS VV +
Sbjct: 263 ------GGYLVNGKTRKLHPRECARVMGYPDSYKV--HPSTSQAYKQFGNS----VVINV 310
Query: 308 LQYLFAQAG 316
LQY+ G
Sbjct: 311 LQYIAYNIG 319
>gi|150026187|ref|YP_001297013.1| type II modification methyltransferase [Flavobacterium
psychrophilum JIP02/86]
gi|149772728|emb|CAL44211.1| Probable type II modification methyltransferase [Flavobacterium
psychrophilum JIP02/86]
Length = 335
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 7/102 (6%)
Query: 5 HAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFET 60
H LL+ PCQP+++ GL+K SD R F I ++ K P +ENV G +
Sbjct: 71 HDILLAGFPCQPFSQAGLKKGFSDTRGTLFFDIERIL--IAKKPQAFLLENVKQLKGHDK 128
Query: 61 SDTHAKMIEILANSDYLTQEF-ILSPLQFGVPYSRPRYFCLA 101
T A +IE L N Y ++ +L +FG+P +R R + +
Sbjct: 129 GKTLATIIEHLKNIGYENVQYEVLKAKEFGLPQNRERIYIVG 170
>gi|419808401|ref|ZP_14333305.1| Type II restriction modification system C5-cytosine and N4-cytosine
or N6-adenine DNAmethyltransferase [Mycoplasma
agalactiae 14628]
gi|390605804|gb|EIN15177.1| Type II restriction modification system C5-cytosine and N4-cytosine
or N6-adenine DNAmethyltransferase [Mycoplasma
agalactiae 14628]
Length = 593
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 11/100 (11%)
Query: 11 PPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS------DTH 64
PPCQ ++ +G +K D R F FL+ L+++ P + +ENV T+ D
Sbjct: 81 PPCQGFSNKGKKKGLDDPRNFLFLEYLDIVEKV--SPELFIIENVKTMLTAVKGYFIDQI 138
Query: 65 AKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
K IE++ Y +L+ FG+P SRPR +A ++
Sbjct: 139 VKKIELMG---YKISYGVLNAKDFGIPQSRPRAIIIAHKE 175
>gi|325860528|ref|ZP_08173633.1| modification methylase HaeIII [Prevotella denticola CRIS 18C-A]
gi|325481968|gb|EGC84996.1| modification methylase HaeIII [Prevotella denticola CRIS 18C-A]
Length = 403
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 133/322 (41%), Gaps = 39/322 (12%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFL-----KILELIPHTVKPPHMLFVENVVGFETSDTHAK 66
PCQP++ G +K D L +IL+ K P ENV G +S +
Sbjct: 91 PCQPFSNAGNRKGIHDDNGRGTLFEECERILKSKIQIGKRPKAFVFENVRGILSSKMPSG 150
Query: 67 MI---EI---LANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL-SFRCQLLNNQLLR 119
+ EI + N Y ++ +GVP SR R + + L +F + N ++
Sbjct: 151 VTVPQEIKNRMENMGYNVAIHLVCAKDYGVPQSRYRVLIIGTERNLPTFDFAEMANIVVD 210
Query: 120 S--PSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVE--RFLEFSNSGDQVNTETGFLST 175
PS GN + ++ +L++ + V + E++ + + G T
Sbjct: 211 HSIPSFCHGNYENLLV----------GSVLQNLNGVSGSEYWEYTAATQYMVDMIGPCKT 260
Query: 176 GTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRY 235
G + F E+ + + + E+ +Y + ++ K Y R+
Sbjct: 261 GKEYLSFFAKPFHITEIPQISTKGKSWKDIPY-EKLPPRFKRIYDNPQKYHA-PKFYRRF 318
Query: 236 VKG--TGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYA 293
G G++ A+ QP+N G ++ R +T RE+A + SFP ++ F + L+ RY
Sbjct: 319 ALGEINGTITASAQPENCGITHPIEN---RRYTVREIARIQSFPDNYHF-DSIPLQSRYK 374
Query: 294 LLGNSLSIAVVAPLLQYLFAQA 315
++GN+ V P+L ++ A A
Sbjct: 375 VIGNA-----VPPVLGWVIASA 391
>gi|428780232|ref|YP_007172018.1| DNA-methyltransferase Dcm [Dactylococcopsis salina PCC 8305]
gi|428694511|gb|AFZ50661.1| DNA-methyltransferase Dcm [Dactylococcopsis salina PCC 8305]
Length = 324
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 6/109 (5%)
Query: 5 HAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFET 60
H LL+ PCQP++ G D R +F I ++ + P L +ENV VG +
Sbjct: 75 HDLLLAGFPCQPFSICGKLNGFEDIRGTAFFDIARILDY--HQPEALVLENVKQLVGHQK 132
Query: 61 SDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 109
T ++E+L N Y + +L+ L FG+P R R F + R+ + F+
Sbjct: 133 GKTLQIILEVLRNLGYYVEYKVLNALDFGLPQKRERVFIVGCRQSVRFQ 181
>gi|227485931|ref|ZP_03916247.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus lactolyticus ATCC
51172]
gi|227235976|gb|EEI85991.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus lactolyticus ATCC
51172]
Length = 318
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF---ETSDTHAKMI 68
PCQP++ G + DAR F ++ ++ K P +ENV G + +T +I
Sbjct: 70 PCQPFSIAGKRMGFEDARGTLFFEVARIL--KAKRPKAFILENVAGLVSHDNGNTLGTII 127
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
IL DY +L+ +G+P +R R++C+ K
Sbjct: 128 NILNELDYKVVWKLLNAKNYGIPQNRNRWYCVGVDK 163
>gi|365837695|ref|ZP_09379055.1| DNA (cytosine-5-)-methyltransferase [Hafnia alvei ATCC 51873]
gi|364561408|gb|EHM39312.1| DNA (cytosine-5-)-methyltransferase [Hafnia alvei ATCC 51873]
Length = 346
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 12/102 (11%)
Query: 12 PCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVKPPHMLFVENVVGFETSDTHA--- 65
PCQP++RQ QK++ D R + F + +E P + VENV G + D +
Sbjct: 83 PCQPFSRQNNQKKTDDPRLNLLWEFGRFVETCQ-----PDFVLVENVPGIQKLDVSSGPL 137
Query: 66 -KMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 106
IE++ ++ Y + ++ + +GVP R R+ LA +K +
Sbjct: 138 LSFIELIKSNKYHSNHGVIPAIWYGVPQKRERFVLLASKKSI 179
>gi|378776967|ref|YP_005185404.1| hypothetical protein lp12_1037 [Legionella pneumophila subsp.
pneumophila ATCC 43290]
gi|364507781|gb|AEW51305.1| hypothetical protein lp12_1037 [Legionella pneumophila subsp.
pneumophila ATCC 43290]
Length = 341
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Query: 5 HAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD- 62
H LL PCQ ++ G QK SD R F I +++ VK P +ENV T D
Sbjct: 87 HDILLGGFPCQAFSIIGRQKGFSDTRGTLFFNIEQIL--KVKRPRAFLLENVKQLSTHDG 144
Query: 63 --THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
T +IE L N Y IL+ L FGVP R R + +
Sbjct: 145 GRTFQIIIETLRNLGYTVYSTILNSLDFGVPQKRERTYIVG 185
>gi|54297036|ref|YP_123405.1| hypothetical protein lpp1078 [Legionella pneumophila str. Paris]
gi|53750821|emb|CAH12229.1| hypothetical protein lpp1078 [Legionella pneumophila str. Paris]
Length = 320
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Query: 5 HAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD- 62
H LL PCQ ++ G QK SD R F I +++ VK P +ENV T D
Sbjct: 66 HDILLGGFPCQAFSIIGRQKGFSDTRGTLFFNIEQIL--KVKRPRAFLLENVKQLSTHDG 123
Query: 63 --THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
T +IE L N Y IL+ L FGVP R R + +
Sbjct: 124 GRTFQIIIETLRNLGYTVYSTILNSLDFGVPQKRERTYIVG 164
>gi|225862882|ref|YP_002748260.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus 03BB102]
gi|225789623|gb|ACO29840.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus 03BB102]
Length = 360
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 66/139 (47%), Gaps = 11/139 (7%)
Query: 10 SPPCQPYTRQG-LQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDT---HA 65
PPCQ ++ QK+ D R F + + + V P ++ +ENV G T D
Sbjct: 78 GPPCQGFSSANRWQKEIEDPRNKLFYEYIRFV--EVLKPKVVLIENVRGILTRDNGYAKN 135
Query: 66 KMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLL 125
K+ EIL S Y +L ++GVP R R F LA R+ + Q+ +L++ P L+
Sbjct: 136 KIYEILQRSGYNVDSAVLDASEYGVPQKRLRAFFLATRQDIP---QITFEKLVKQPKVLV 192
Query: 126 GN--DDMTVITKHDQPDDS 142
+++ V+ K Q ++
Sbjct: 193 KEAIEELYVLEKKAQKGET 211
>gi|197302809|ref|ZP_03167861.1| hypothetical protein RUMLAC_01538 [Ruminococcus lactaris ATCC
29176]
gi|197298046|gb|EDY32594.1| modification methylase HhaI [Ruminococcus lactaris ATCC 29176]
Length = 333
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G Q+ D+R F + ++ K P ++F+ENV F T D H K +E++
Sbjct: 80 PCQAFSISGKQRGFEDSRGTLFFDVARIVK--AKKPKVVFMENVKNFATHD-HGKTLEVV 136
Query: 72 ANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 108
+ Y + +L+ + +G+P R R + + R L
Sbjct: 137 KRTMETLGYTFYQKVLNAVDYGIPQKRERIYMVCFRNDLGI 177
>gi|418695778|ref|ZP_13256791.1| putative modification methylase HhaI [Leptospira kirschneri str.
H1]
gi|421109759|ref|ZP_15570270.1| putative modification methylase HhaI [Leptospira kirschneri str.
H2]
gi|409956522|gb|EKO15450.1| putative modification methylase HhaI [Leptospira kirschneri str.
H1]
gi|410005119|gb|EKO58919.1| putative modification methylase HhaI [Leptospira kirschneri str.
H2]
Length = 338
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 5/100 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQP++ G K D R F +I ++ K P +ENV V T K+I
Sbjct: 81 PCQPFSIIGKGKGFEDTRGTLFFEIARIL--DAKRPKAFILENVKQLVSHNEGKTFKKII 138
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 108
E L + Y + +L+ L +G+P R R F + KP+ F
Sbjct: 139 ETLNSLGYSIEYKVLNALHYGLPQKRERVFIVGFHKPMQF 178
>gi|253827583|ref|ZP_04870468.1| putative methylase [Helicobacter canadensis MIT 98-5491]
gi|313141791|ref|ZP_07803984.1| cytosine-specific DNA methyltransferase [Helicobacter canadensis
MIT 98-5491]
gi|253510989|gb|EES89648.1| putative methylase [Helicobacter canadensis MIT 98-5491]
gi|313130822|gb|EFR48439.1| cytosine-specific DNA methyltransferase [Helicobacter canadensis
MIT 98-5491]
Length = 589
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDT---HAK 66
PPCQ ++ +G +D R F FL+ LEL+ P + +ENV + +
Sbjct: 78 GPPCQGFSLKGKNLGLADERNFLFLEYLELVEKV--NPEIFIIENVKNLYNAVNGYFREE 135
Query: 67 MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA-KRKPLSF 108
+I+ + N Y+ IL+ +GVP +R R F +A K + LSF
Sbjct: 136 IIKKIKNMGYVVNCKILNAKHYGVPQNRERVFFIAHKERLLSF 178
>gi|325912423|ref|ZP_08174818.1| modification methylase HhaI [Lactobacillus iners UPII 143-D]
gi|325475765|gb|EGC78936.1| modification methylase HhaI [Lactobacillus iners UPII 143-D]
Length = 314
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 123/313 (39%), Gaps = 81/313 (25%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G Q+ D+R F + ++ K P ++F+ENV F T D K + ++
Sbjct: 59 PCQAFSISGKQQGFEDSRGTLFFDVARIVKE--KRPIVVFLENVKTFATHDG-GKTLNVV 115
Query: 72 ANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGN 127
N+ Y Q +L+P+ +GVP R R + L R +N ++ P P
Sbjct: 116 INTMNELGYSFQYSVLNPVDYGVPQKRERIYMLCFRND-------INREVFTFPRPF--- 165
Query: 128 DDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAE 187
+K +E +F S +VN + VD
Sbjct: 166 --------------KLNKFVE---------DFLISDYEVN---------SLIVD-----R 188
Query: 188 ETVEVDRCVSIDH---FLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLA 244
E + ++ + I++ + + + + G I P + T S Y G + A
Sbjct: 189 EDLRLNEKIDINYNSISTIRVGTVGKGGQGERIYSP---KGIAITLSAY------GGVFA 239
Query: 245 TVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQF-PHHLSLRQRYALLGNSLSIAV 303
K G + K + L PRE A + FP F+ P++ Q Y LGNS V
Sbjct: 240 ----KTGGYLINGKTRRLH---PRECARIMGFPDSFKLNPNN---NQAYKQLGNS----V 285
Query: 304 VAPLLQYLFAQAG 316
V +LQ++ Q G
Sbjct: 286 VIDVLQFITKQIG 298
>gi|86151502|ref|ZP_01069717.1| type II DNA-methyltransferase [Campylobacter jejuni subsp. jejuni
260.94]
gi|85841849|gb|EAQ59096.1| type II DNA-methyltransferase [Campylobacter jejuni subsp. jejuni
260.94]
Length = 187
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 5/104 (4%)
Query: 3 GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD 62
G + + PPCQ ++ +G D R F F + LE++ + P + +ENV T +
Sbjct: 72 GINMIIGGPPCQGFSSKGKNLGLQDERNFLFKEYLEIVK--IIKPDIFIIENVKNLITCE 129
Query: 63 THAKMIEI---LANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 103
+ EI + DY + +L+ L FGVP +R R F +A +
Sbjct: 130 NSYFLNEIKKEIKKLDYKLEFKVLNALDFGVPQNRQRAFLIASK 173
>gi|144900416|emb|CAM77280.1| modification methylase MthTI [Magnetospirillum gryphiswaldense
MSR-1]
Length = 356
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 55/113 (48%), Gaps = 8/113 (7%)
Query: 2 YGAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF-- 58
YG+ +L PCQP+++ G Q DAR + E I KPP + ENV F
Sbjct: 78 YGSPTIMLGGFPCQPFSKAGNQLGGQDARGQMGVVFAEKI-MAAKPPAFI-CENVAPFLT 135
Query: 59 --ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 109
E +D + M+ + ++ Y+ +L+ +GVP SR R F + R+ L R
Sbjct: 136 KPEFADVYGAMLAVWGDA-YVVTPTLLNACHYGVPQSRERAFIIGYRRDLGIR 187
>gi|325298663|ref|YP_004258580.1| DNA-cytosine methyltransferase [Bacteroides salanitronis DSM 18170]
gi|324318216|gb|ADY36107.1| DNA-cytosine methyltransferase [Bacteroides salanitronis DSM 18170]
Length = 463
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 109/298 (36%), Gaps = 56/298 (18%)
Query: 6 AWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHA 65
++ PPCQ ++ G Q +D R FL + LI K P +ENV G SD H
Sbjct: 65 GFIGGPPCQSWSEGGKQLGLNDERGKLFLDYVRLIKE--KQPKFFVIENVKGI-ISDKHL 121
Query: 66 K----MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSP 121
+ + IL Y+ +L+ F +P R R F + K L+ C P
Sbjct: 122 QTFLSFLSILEKVGYIVSYALLNAADFRIPQDRYRVFVVGFLKDLN--CN------FHFP 173
Query: 122 SPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVD 181
P L N +T+ K + + V RF GD VN G
Sbjct: 174 HP-LQNAHITL-----------QKAIGDINEVPRFYA---DGDTVNQTYGRWLNHDVFTG 218
Query: 182 DFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGS 241
F A + + + W + +K C ++
Sbjct: 219 PFDAK---------------FMSRNRVRAWNEVSFTIQAQAKNCPLHPQA---------P 254
Query: 242 LLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSL 299
+ + P + A E R F+ RE A + SFP F+F ++ +++ Y ++GN++
Sbjct: 255 TMKYISPHKRIFAVGY-EHLYRRFSIRECARIQSFPDSFRFFYN-DIQEGYKMVGNAV 310
>gi|189339547|pdb|2UZ4|A Chain A, Hhai Dna Methyltransferase R165n Mutant Complex With 13mer
Gcgc-Gmgc Oligonucleotide And Sah
Length = 327
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 110/309 (35%), Gaps = 73/309 (23%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G QK D+R F I ++ K P ++F+ENV F + D + +E++
Sbjct: 80 PCQAFSISGKQKGFEDSRGTLFFDIARIVRE--KKPKVVFMENVKNFASHD-NGNTLEVV 136
Query: 72 ANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGN 127
N+ DY +L+ L +G+P R + + R LN Q + P P N
Sbjct: 137 KNTMNELDYSFHAKVLNALDYGIPQKRENIYMICFRND-------LNIQNFQFPKPFELN 189
Query: 128 DDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAE 187
T + PD + L+ ++R D V T T
Sbjct: 190 ---TFVKDLLLPDSEVEHLV-----IDR-------KDLVMTNQEIEQTTPKT-------- 226
Query: 188 ETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQ 247
V L ++ + G I S R T S Y G G T
Sbjct: 227 ---------------VRLGIVGKGGQGERIY---STRGIAITLSAY----GGGIFAKT-- 262
Query: 248 PKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPL 307
L R PRE A + +P ++ H S Q Y GNS VV +
Sbjct: 263 ------GGYLVNGKTRKLHPRECARVMGYPDSYKV--HPSTSQAYKQFGNS----VVINV 310
Query: 308 LQYLFAQAG 316
LQY+ G
Sbjct: 311 LQYIAYNIG 319
>gi|189096047|pdb|2UYC|A Chain A, Hhai Dna Methyltransferase R163n Mutant Complex With 13mer
Gcgc-Gmgc Oligonucleotide And Sah
Length = 327
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 110/309 (35%), Gaps = 73/309 (23%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G QK D+R F I ++ K P ++F+ENV F + D + +E++
Sbjct: 80 PCQAFSISGKQKGFEDSRGTLFFDIARIVRE--KKPKVVFMENVKNFASHD-NGNTLEVV 136
Query: 72 ANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGN 127
N+ DY +L+ L +G+P R + + R LN Q + P P N
Sbjct: 137 KNTMNELDYSFHAKVLNALDYGIPQKNERIYMICFRND-------LNIQNFQFPKPFELN 189
Query: 128 DDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAE 187
T + PD + L+ ++R D V T T
Sbjct: 190 ---TFVKDLLLPDSEVEHLV-----IDR-------KDLVMTNQEIEQTTPKT-------- 226
Query: 188 ETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQ 247
V L ++ + G I S R T S Y G G T
Sbjct: 227 ---------------VRLGIVGKGGQGERIY---STRGIAITLSAY----GGGIFAKT-- 262
Query: 248 PKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPL 307
L R PRE A + +P ++ H S Q Y GNS VV +
Sbjct: 263 ------GGYLVNGKTRKLHPRECARVMGYPDSYKV--HPSTSQAYKQFGNS----VVINV 310
Query: 308 LQYLFAQAG 316
LQY+ G
Sbjct: 311 LQYIAYNIG 319
>gi|160877870|pdb|2Z6U|A Chain A, Ternary Structure Of The Glu119ala M.Hhai, C5-Cytosine Dna
Methyltransferase, With Unmodified Dna And Adohcy
Length = 327
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 110/309 (35%), Gaps = 73/309 (23%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G QK D+R F I ++ K P ++F+ NV F + D + +E++
Sbjct: 80 PCQAFSISGKQKGFEDSRGTLFFDIARIVRE--KKPKVVFMANVKNFASHD-NGNTLEVV 136
Query: 72 ANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGN 127
N+ DY +L+ L +G+P R R + + R LN Q + P P N
Sbjct: 137 KNTMNELDYSFHAKVLNALDYGIPQKRERIYMICFRND-------LNIQNFQFPKPFELN 189
Query: 128 DDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAE 187
T + PD + L+ ++R D V T T
Sbjct: 190 ---TFVKDLLLPDSEVEHLV-----IDR-------KDLVMTNQEIEQTTPKT-------- 226
Query: 188 ETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQ 247
V L ++ + G I S R T S Y G G T
Sbjct: 227 ---------------VRLGIVGKGGQGERIY---STRGIAITLSAY----GGGIFAKT-- 262
Query: 248 PKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPL 307
L R PRE A + +P ++ H S Q Y GNS VV +
Sbjct: 263 ------GGYLVNGKTRKLHPRECARVMGYPDSYKV--HPSTSQAYKQFGNS----VVINV 310
Query: 308 LQYLFAQAG 316
LQY+ G
Sbjct: 311 LQYIAYNIG 319
>gi|428308044|ref|YP_007144869.1| DNA-cytosine methyltransferase [Crinalium epipsammum PCC 9333]
gi|428249579|gb|AFZ15359.1| DNA-cytosine methyltransferase [Crinalium epipsammum PCC 9333]
Length = 395
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 127/317 (40%), Gaps = 52/317 (16%)
Query: 10 SPPCQPYTRQGL--QKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
SPPCQ ++ +G +K ++ + F +E++ P + ENV GF+TS
Sbjct: 72 SPPCQGFSNEGYKNEKDPRNSLVWKFFDFIEILT-----PKVWIFENVPGFKTSYKGIYF 126
Query: 68 IEILANSD----YLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSP 123
++ + Y FIL+ +GVP R R+F + +K R + +++L
Sbjct: 127 KQLQQRLELMPAYQWNYFILNSSDYGVPQKRSRFFAIGAKKFQPQRPEATHSKL----GE 182
Query: 124 LLGNDDMTVITKHDQPDDSWDKL--LESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVD 181
+LG D + W+ + L E+ F + G+ +
Sbjct: 183 VLGTDKAISL---------WESISDLPKIGIGEKKGIFEYDKPAECEYQKWARLGSNIIK 233
Query: 182 DFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIV---YPDSKRCCCFTKSYYRYVKG 238
+ + + V + VP+ GS M++ Y ++K C Y R VK
Sbjct: 234 NHTSQNHSQRVLEKIK----SVPM------GSGMEVFVNKYQENKVVYC--GGYRRAVKD 281
Query: 239 TGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNS 298
S A +G S E+H R+ +PRE A + SFP F F + + Y + N+
Sbjct: 282 EPSYTAYW---TRGMTSIHPEEH-RFLSPRECARIQSFPDSFIF--QGTTIENYTQICNA 335
Query: 299 LSIAVVAPLLQYLFAQA 315
V PL+ FA++
Sbjct: 336 -----VPPLVARSFARS 347
>gi|149373126|ref|ZP_01892014.1| DcmB [unidentified eubacterium SCB49]
gi|149354274|gb|EDM42843.1| DcmB [unidentified eubacterium SCB49]
Length = 349
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 110/323 (34%), Gaps = 83/323 (25%)
Query: 10 SPPCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAK 66
PPCQ ++ G + D R + F++ILE K P ENV G S H +
Sbjct: 69 GPPCQSWSEAGAARGIKDKRGQLFYDFIRILE-----AKQPKFFLAENVSGMLIS-KHTE 122
Query: 67 MIEIL------ANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRS 120
+E + A Y +L+ + VP R R F + RK L+F+ Q +
Sbjct: 123 ALEGIKELFRNAGIGYELSFQMLNASDYNVPQDRKRVFFIGIRKDLNFKYQFPTETFPKI 182
Query: 121 PSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAV 180
P +D L E P LE++N+
Sbjct: 183 PL-----------------EDVISDLQEGVLPA---LEYNNTNG---------------- 206
Query: 181 DDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTG 240
D CV +H E + ++ R + + Y G
Sbjct: 207 ------------DNCVVPNH--------EYMIGSFSTIFMSRNRVRSWDEQ--SYTIQAG 244
Query: 241 SLLATVQP---------KNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQR 291
A + P KNK KE R + RE A + +FP DF F H+ +
Sbjct: 245 GRHAPIHPQAPKMKFIEKNKRIFVPGKEHLYRRLSVRECARIQTFPNDFIF-HYKKVAAG 303
Query: 292 YALLGNSLSIAVVAPLLQYLFAQ 314
Y ++GN++ + + L + Q
Sbjct: 304 YKMIGNAVPVNLAKFLANSIMEQ 326
>gi|339321014|ref|YP_004683536.1| cytosine-specific DNA methylase [Mycoplasma bovis Hubei-1]
gi|392430096|ref|YP_006471141.1| DNA-methyltransferase [Mycoplasma bovis HB0801]
gi|338227139|gb|AEI90201.1| cytosine-specific DNA methylase [Mycoplasma bovis Hubei-1]
gi|392051505|gb|AFM51880.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma bovis HB0801]
Length = 479
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF---ETSDTHAKMI 68
PCQ +++ G Q +DAR F I ++ H P +ENV F ++ +T A +
Sbjct: 74 PCQAFSKAGKQAGINDARGTLFYDIARILEH--HKPKFFILENVRNFVSHDSGNTWAIVK 131
Query: 69 EILANSDY-LTQE-FILSPLQFGVPYSRPRYFCLAKRKP 105
IL + Y LT +LSP QFGVP R R + L + P
Sbjct: 132 NILRSLGYRLTYSPLVLSPHQFGVPQFRERVYILGQYDP 170
>gi|390438968|ref|ZP_10227394.1| Modification methylase NgoBI [Microcystis sp. T1-4]
gi|389837617|emb|CCI31518.1| Modification methylase NgoBI [Microcystis sp. T1-4]
Length = 340
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 57/132 (43%), Gaps = 15/132 (11%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV---GFETSDTHAKMI 68
PCQP++ G K D R F +I ++ VK P +ENV G + T ++
Sbjct: 84 PCQPFSICGDLKGFEDTRGTLFFEIARILK--VKQPAAFILENVKQLQGHQQGKTLQVIL 141
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGND 128
+ L + DY T +L+ L FG+P R R F + R+ F P P L
Sbjct: 142 DTLQDLDYYTDYRVLNALNFGLPQKRERIFIVGFRESRRFIW----------PKPALSRT 191
Query: 129 DMTVITKHDQPD 140
+T I + + D
Sbjct: 192 SLTEILEENVSD 203
>gi|307152213|ref|YP_003887597.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822]
gi|306982441|gb|ADN14322.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822]
Length = 317
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 5/107 (4%)
Query: 5 HAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETS 61
H L PCQP++ G+ K D R F +I ++ + K P +ENV G +
Sbjct: 80 HLLLAGFPCQPFSICGVLKGFEDTRGTLFFEIARILEY--KKPLAFVLENVKQLFGHQQG 137
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 108
T +I+IL Y IL+ L FG+P R R F + +P+ F
Sbjct: 138 KTLKVIIDILEKLGYNVTYKILNALDFGLPQKRERIFIVGCLEPIPF 184
>gi|119488852|ref|ZP_01621814.1| NgoIM [Lyngbya sp. PCC 8106]
gi|119455013|gb|EAW36155.1| NgoIM [Lyngbya sp. PCC 8106]
Length = 385
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 12/99 (12%)
Query: 12 PCQPYT----RQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDT--HA 65
PCQP++ +QG++ Q R F +I+E+I K P +ENV T + H
Sbjct: 71 PCQPFSPAGKKQGIRDQ---VRGTLFERIVEIIKD--KQPQYFLLENVKRILTMEQGYHF 125
Query: 66 KMI-EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 103
++I LA DYL + +++PL FG+P +R R F L +
Sbjct: 126 RVILNALATLDYLIEWRLINPLHFGIPQNRDRVFILGTK 164
>gi|158431504|pdb|2Z6Q|A Chain A, Ternary Structure Of Arg165ala M.Hhai C5-Cytosine Dna
Methyltransferase With Unmodified Dna And Adohcy
Length = 327
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 110/309 (35%), Gaps = 73/309 (23%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G QK D+R F I ++ K P ++F+ENV F + D + +E++
Sbjct: 80 PCQAFSISGKQKGFEDSRGTLFFDIARIVRE--KKPKVVFMENVKNFASHD-NGNTLEVV 136
Query: 72 ANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGN 127
N+ DY +L+ L +G+P R + + R LN Q + P P N
Sbjct: 137 KNTMNELDYSFHAKVLNALDYGIPQKREAIYMICFRND-------LNIQNFQFPKPFELN 189
Query: 128 DDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAE 187
T + PD + L+ ++R D V T T
Sbjct: 190 ---TFVKDLLLPDSEVEHLV-----IDR-------KDLVMTNQEIEQTTPKT-------- 226
Query: 188 ETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQ 247
V L ++ + G I S R T S Y G G T
Sbjct: 227 ---------------VRLGIVGKGGQGERIY---STRGIAITLSAY----GGGIFAKT-- 262
Query: 248 PKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPL 307
L R PRE A + +P ++ H S Q Y GNS VV +
Sbjct: 263 ------GGYLVNGKTRKLHPRECARVMGYPDSYKV--HPSTSQAYKQFGNS----VVINV 310
Query: 308 LQYLFAQAG 316
LQY+ G
Sbjct: 311 LQYIAYNIG 319
>gi|430377337|ref|ZP_19431470.1| DNA (cytosine-5-)-methyltransferase [Moraxella macacae 0408225]
gi|429540474|gb|ELA08503.1| DNA (cytosine-5-)-methyltransferase [Moraxella macacae 0408225]
Length = 615
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 9/103 (8%)
Query: 12 PCQPYTRQGLQKQSSDA----RAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTH 64
PCQP+++ GL+K D R F I++++ K P +ENV V + T+
Sbjct: 76 PCQPFSQAGLKKGFQDGADSERGNLFFCIVDILE--AKKPKAFILENVRHLVNHDDGKTY 133
Query: 65 AKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 107
A ++ +L + Y+ Q +L + VP RPR F + +K +S
Sbjct: 134 ATILTLLDKAGYVVQHQVLKASDYNVPQHRPRVFLVGFKKDIS 176
>gi|390955024|ref|YP_006418782.1| DNA-methyltransferase Dcm [Aequorivita sublithincola DSM 14238]
gi|390421010|gb|AFL81767.1| DNA-methyltransferase Dcm [Aequorivita sublithincola DSM 14238]
Length = 326
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 5/100 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQP++ G K +D R F I +I K P +ENV VG + T ++
Sbjct: 80 PCQPFSIIGQMKGLNDTRGTLFFDIARII--EAKRPKAFILENVKQLVGHDQGKTLKVIV 137
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 108
+ L + Y Q +L+ L +G+P R R + R+P+ F
Sbjct: 138 QSLKDLGYHVQYSVLNALDYGLPQKRERVVIVGHREPIMF 177
>gi|423135701|ref|ZP_17123347.1| DNA (cytosine-5-)-methyltransferase [Myroides odoratimimus CIP
101113]
gi|371640805|gb|EHO06401.1| DNA (cytosine-5-)-methyltransferase [Myroides odoratimimus CIP
101113]
Length = 321
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD--THAKMIE 69
PCQP++ G +K D R F +IL+ + + P ++F+ENV +T D T K+IE
Sbjct: 74 PCQPFSVAGYRKGFDDHRGNHFFRILDFV--DIIRPKVVFLENVKNLKTHDKGTTFKVIE 131
Query: 70 -ILANSDYLTQEFILSPLQFG-VPYSRPRYFCLAKRKPL 106
L +Y Q +L+ +G +P++R R F +A K +
Sbjct: 132 NALRERNYSFQSAVLNTKDYGNIPHNRERIFIVAFDKDI 170
>gi|374307360|ref|YP_005053791.1| modification methylase EcoRII [Filifactor alocis ATCC 35896]
gi|291165856|gb|EFE27903.1| modification methylase EcoRII [Filifactor alocis ATCC 35896]
Length = 375
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 128/333 (38%), Gaps = 78/333 (23%)
Query: 12 PCQPYTRQGLQKQ-SSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDT------- 63
PCQ ++R GL++ +++ F I E+I T P +F+ENV D
Sbjct: 75 PCQTFSRAGLEEGFNNEQNGVVFNHIAEIIQRT--RPRAIFLENVDNLVRHDKGNTFRVI 132
Query: 64 --------HAKMIEILANSD----YLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQ 111
+ K+I + N Y ++FI + FG+P +RPR + +A
Sbjct: 133 IHTLEELLNYKVIGVTYNDIGELIYNGKDFIRNSRNFGIPQNRPRTYIMAF--------- 183
Query: 112 LLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLE-SCDPVERFLEFSNSGDQVNTET 170
N+ L LLG ++ K+ + + LLE +P ++ S NT
Sbjct: 184 ---NRQLYGADTLLGIGNLLPTEKNRYLYEDLNSLLEFRAEP-----KYYMSSGYFNTLV 235
Query: 171 GFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAM--DIVYPDSKRCCCF 228
+ FG V I+H V +++ GS +++Y +
Sbjct: 236 RHRERERKKGNGFG-----YRVVNEPGIEH-PVANTIMATGGSGKERNLIYDPQE----- 284
Query: 229 TKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPG---------- 278
G T+ PK ++L + +R TPRE L F
Sbjct: 285 -----------GIAGMTIPPKR----TALNNRGIRVMTPREWGKLQGFINYAFLDEEGVD 329
Query: 279 DFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYL 311
F FP +S+ Q+Y GNS++I V+ + +++
Sbjct: 330 HFSFPSEVSVAQQYKQFGNSVTIPVIETMAEFM 362
>gi|342903643|ref|ZP_08725451.1| modification methylase NgoPII [Haemophilus haemolyticus M21621]
gi|341954894|gb|EGT81363.1| modification methylase NgoPII [Haemophilus haemolyticus M21621]
Length = 336
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/298 (20%), Positives = 108/298 (36%), Gaps = 59/298 (19%)
Query: 10 SPPCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
PPCQ ++ G + +DAR F +++IL+ K P ENV G +D
Sbjct: 70 GPPCQSWSEAGALRGINDARGQLFFDYIRILK-----SKQPKFFLAENVSGMLANRHNDA 124
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSP 123
++++ Y +++ +G+ R R F + RK L + P
Sbjct: 125 VQNLLKMFDECGYDVTLTMVNAKDYGIAQERKRVFYIGFRKDLGINFEF--------PIG 176
Query: 124 LLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDF 183
+D+ + K D WD + +ER L+ + +N F+
Sbjct: 177 STSSDEKKITLK----DIIWDLKDTAVPALERNLKNPAA---INNNEYFIG--------- 220
Query: 184 GAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLL 243
S + + ++ W V ++C ++ GT
Sbjct: 221 -------------SFSPIFMSRNRVKAWHEQAFTVQASGRQCQLHPQAPKMEKHGTNDYR 267
Query: 244 ATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSI 301
+ KE+ R T REVA + FP DF+F + +L Y ++GN++ +
Sbjct: 268 FVIG----------KEKLYRRMTVREVARIQGFPDDFKFIYK-NLNDAYKMIGNAVPV 314
>gi|390953503|ref|YP_006417261.1| DNA-methyltransferase Dcm [Aequorivita sublithincola DSM 14238]
gi|390419489|gb|AFL80246.1| DNA-methyltransferase Dcm [Aequorivita sublithincola DSM 14238]
Length = 436
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 9/104 (8%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G + D R F + E+I K P +F+ENV G D K + I+
Sbjct: 174 PCQAFSIAGRRGGFEDTRGTLFFDVAEIIKK--KQPEAIFLENVKGLRNHD-KGKTLAII 230
Query: 72 AN------SDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 109
N + Y+ + I++ +FGVP +R R F + RK L +
Sbjct: 231 LNVLREDLNYYVPEPKIMNAKEFGVPQNRERIFIVGFRKDLGIK 274
>gi|328947436|ref|YP_004364773.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489]
gi|328447760|gb|AEB13476.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489]
Length = 439
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 12 PCQPYTRQGLQKQSSD-ARAFSFLKILELIPHTVKPPHMLFVENVVGF---ETSDTHAKM 67
PCQP++ G +K D R F +I E++ V P +F+ENV G + +T A +
Sbjct: 166 PCQPFSYSGQKKGFEDKTRGTLFFEICEIL--KVHRPKFIFLENVKGLISHKNGETIATI 223
Query: 68 IEILANS-DYLTQEFILSPLQFGVPYSRPRYFCLA 101
IL + Y E ILS L F +P R R++C+
Sbjct: 224 RTILKDELGYDIHEVILSSLDFELPQKRERWYCVG 258
>gi|118138268|pdb|2I9K|A Chain A, Engineered Extrahelical Base Destabilization Enhances
Sequence Discrimination Of Dna Methyltransferase M.Hhai
Length = 327
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 110/309 (35%), Gaps = 73/309 (23%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G QK D+R F I ++ K P ++F+ENV + D + +E++
Sbjct: 80 PCQAFSISGKQKGFEDSRGTLFFDIARIVRE--KKPKVVFMENVKNAASHD-NGNTLEVV 136
Query: 72 ANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGN 127
N+ DY +L+ L +G+P R R + + R LN Q + P P N
Sbjct: 137 KNTMNELDYSFHAKVLNALDYGIPQKRERIYMICFRND-------LNIQNFQFPKPFELN 189
Query: 128 DDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAE 187
T + PD + L+ ++R D V T T
Sbjct: 190 ---TFVKDLLLPDSEVEHLV-----IDR-------KDLVMTNQEIEQTTPKT-------- 226
Query: 188 ETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQ 247
V L ++ + G I S R T S Y G G T
Sbjct: 227 ---------------VRLGIVGKGGQGERIY---STRGIAITLSAY----GGGIFAKT-- 262
Query: 248 PKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPL 307
L R PRE A + +P ++ H S Q Y GNS VV +
Sbjct: 263 ------GGYLVNGKTRKLHPRECARVMGYPDSYKV--HPSTSQAYKQFGNS----VVINV 310
Query: 308 LQYLFAQAG 316
LQY+ G
Sbjct: 311 LQYIAYNIG 319
>gi|167761084|ref|ZP_02433211.1| hypothetical protein CLOSCI_03482 [Clostridium scindens ATCC 35704]
gi|167661318|gb|EDS05448.1| modification methylase HpaII [Clostridium scindens ATCC 35704]
Length = 405
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 133/340 (39%), Gaps = 66/340 (19%)
Query: 12 PCQPYTRQGLQKQSSD-ARAFSFLKILELIPHTVKPPHML-FVENVVGFETSDTHAKMIE 69
PCQ +++ G Q+ D R F +I+ ++ H P +L V N+V + +T +
Sbjct: 91 PCQAFSKAGKQEGMEDETRGTLFFEIVRILKHHHTPYIVLENVRNLVSHDHGNTWKVIRA 150
Query: 70 ILANSDYLTQE--FILSPLQFGVPYSRPRYFCLAKRKP--LSFRCQLLNNQLLRSPSPLL 125
L Y E ILSP FGVP R R L K +P + ++ + L++ +
Sbjct: 151 NLRKQGYRLMEKPLILSPHHFGVPQLRERVVILGKYEPNRVDEPLDIVFHDLIKKEQNSI 210
Query: 126 GN-------DDMTVITKHDQPD-DSWDKLLESCD------PV-ERFLEFSNSGDQ----- 165
+ D I++H++ ++WD+ D P+ F + + +
Sbjct: 211 YDVVKDHPVDKKYAISEHEEKVLNAWDEFYHGIDMKVIGFPIWSEFFRYEKAPAEFPAWK 270
Query: 166 ---VNTETGFLSTGTAAVD----------DFGAAEETVEVDRCVSIDHFLVPLSLIERWG 212
VN + +D DF + +E +ID V +I+
Sbjct: 271 QEFVNKNIRLYQSNQKFIDQWLKKYNDLKDFTPTQRKMEWQAGTNIDS--VWEGVIQLRP 328
Query: 213 SAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVAN 272
S + I P CF +L+A VQ G+ + R T E A
Sbjct: 329 SGVRIKVP-----TCFP-----------ALVAIVQIPIIGR-------YKRRLTVEESAA 365
Query: 273 LHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 312
L SFP +F + + +Q Y GNS+++ V+A + LF
Sbjct: 366 LQSFPA--KFISNANDQQAYKQYGNSVNVTVIAECAKRLF 403
>gi|386748708|ref|YP_006221916.1| DNA (cytosine-5-)-methyltransferase [Helicobacter cetorum MIT
99-5656]
gi|384554950|gb|AFI06706.1| DNA (cytosine-5-)-methyltransferase [Helicobacter cetorum MIT
99-5656]
Length = 317
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 6/106 (5%)
Query: 3 GAHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGF 58
G H L+ PCQP++ G K D R F I E+I P M+ +ENV +
Sbjct: 59 GKHDILIGGFPCQPFSTLGALKGFDDKRGTLFFTICEIIEK--HKPKMVVLENVKNLINH 116
Query: 59 ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
+T +++ L +Y IL+ L FG+P R R F +A +K
Sbjct: 117 NKGETFKRILFELDRLNYQVNYEILNTLDFGLPQQRNRVFIVALKK 162
>gi|413915569|emb|CCM44165.1| DNA-cytosine methyltransferase [Staphylococcus xylosus]
Length = 359
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 122/322 (37%), Gaps = 68/322 (21%)
Query: 10 SPPCQPYTRQG-LQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDT---HA 65
PPCQ ++ K D R F + L + + P +ENV G T D
Sbjct: 75 GPPCQGFSSANRYLKDEDDPRNKLFYEYLRFV--NIIRPKAFIIENVPGILTRDNGYAKE 132
Query: 66 KMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLL 125
K++E+ + DY + +LS +GVP R R F + RK L+ + N P+
Sbjct: 133 KILELTESYDYNVEVKVLSSENYGVPEIRKRAFFVGIRKDLNLKFNFAN------LKPIF 186
Query: 126 GNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGA 185
N T HD D LE SG NT + + +
Sbjct: 187 EN-----TTVHDAIKD---------------LEVLESGQLYNT---LFGVELSPIQKYYF 223
Query: 186 AEETVEVDR---CVSIDHFLVPLSLIERWGSAMDIVYP--DSKRCCCFTKSYYRYVKGTG 240
E +++++ V + + + + + G+ D+ D+KR + +Y R
Sbjct: 224 DENSLQIENHNISVHNEKVVERIKHVPQGGNWRDVPEELWDTKRNNRHSSAYRR------ 277
Query: 241 SLLATVQPKNKGKASSLKEQHLRYFTP--------REVANLHSFPGDFQFPHHLSLRQRY 292
L +P + ++ H+ YF P RE A + SF F F + + Q+Y
Sbjct: 278 --LDYSKP-----SITIDTGHMNYFHPVFHRVPSVRESARIQSFNDSFVF--YGTKTQQY 328
Query: 293 ALLGNSLSIAVVAPLLQYLFAQ 314
+GN+ V P+L AQ
Sbjct: 329 KQVGNA-----VPPILAQALAQ 345
>gi|336420488|ref|ZP_08600652.1| hypothetical protein HMPREF0993_00029 [Lachnospiraceae bacterium
5_1_57FAA]
gi|336009847|gb|EGN39836.1| hypothetical protein HMPREF0993_00029 [Lachnospiraceae bacterium
5_1_57FAA]
Length = 387
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 133/340 (39%), Gaps = 66/340 (19%)
Query: 12 PCQPYTRQGLQKQSSD-ARAFSFLKILELIPHTVKPPHML-FVENVVGFETSDTHAKMIE 69
PCQ +++ G Q+ D R F +I+ ++ H P +L V N+V + +T +
Sbjct: 73 PCQAFSKAGKQEGMEDETRGTLFFEIVRILKHHHTPYIVLENVRNLVSHDHGNTWKVIRA 132
Query: 70 ILANSDYLTQE--FILSPLQFGVPYSRPRYFCLAKRKP--LSFRCQLLNNQLLRSPSPLL 125
L Y E ILSP FGVP R R L K +P + ++ + L++ +
Sbjct: 133 NLRKQGYRLMEKPLILSPHHFGVPQLRERVVILGKYEPNRVDEPLDIVFHDLIKKEQNSI 192
Query: 126 GN-------DDMTVITKHDQPD-DSWDKLLESCD------PV-ERFLEFSNSGDQ----- 165
+ D I++H++ ++WD+ D P+ F + + +
Sbjct: 193 YDVVKDHPVDKKYAISEHEEKVLNAWDEFYHGIDMKVIGFPIWSEFFRYEKAPAEFPAWK 252
Query: 166 ---VNTETGFLSTGTAAVD----------DFGAAEETVEVDRCVSIDHFLVPLSLIERWG 212
VN + +D DF + +E +ID V +I+
Sbjct: 253 QEFVNKNIRLYQSNQKFIDQWLKKYNDLKDFTPTQRKMEWQAGTNIDS--VWEGVIQLRP 310
Query: 213 SAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVAN 272
S + I P CF +L+A VQ G+ + R T E A
Sbjct: 311 SGVRIKVP-----TCFP-----------ALVAIVQIPIIGR-------YKRRLTVEESAA 347
Query: 273 LHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 312
L SFP +F + + +Q Y GNS+++ V+A + LF
Sbjct: 348 LQSFPA--KFISNANDQQAYKQYGNSVNVTVIAECAKRLF 385
>gi|425434415|ref|ZP_18814884.1| Modification methylase NgoBI [Microcystis aeruginosa PCC 9432]
gi|389676067|emb|CCH94831.1| Modification methylase NgoBI [Microcystis aeruginosa PCC 9432]
Length = 331
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 15/132 (11%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV---GFETSDTHAKMI 68
PCQP++ G K D R F +I+ ++ K P +ENV G + T ++
Sbjct: 84 PCQPFSICGNLKGFEDTRGTLFFEIVRILK--AKQPAAFILENVKQLQGHQQGKTLQVIL 141
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGND 128
+ L + DY T +L+ L FG+P R R F + R+ F P P L
Sbjct: 142 DTLQDLDYYTDYRVLNALNFGLPQKRERIFIVGFRETRGFIW----------PKPALSRT 191
Query: 129 DMTVITKHDQPD 140
+T I + + D
Sbjct: 192 TLTEILEENVSD 203
>gi|434381477|ref|YP_006703260.1| cytosine-specific DNA-methyltransferase [Brachyspira pilosicoli
WesB]
gi|404430126|emb|CCG56172.1| cytosine-specific DNA-methyltransferase [Brachyspira pilosicoli
WesB]
Length = 417
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQP+++ G +K++ DAR L +E I KP + +ENV F S +
Sbjct: 69 PCQPFSKAGERKETEDARGL-LLNYVEKIILNHKPSFFI-LENVERFGKSKLKKDFTNKV 126
Query: 72 ANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 103
S Y Q I+SP Q G+P RPR F + ++
Sbjct: 127 E-SLYNIQYVIVSPDQLGIPQHRPRIFIIGQK 157
>gi|319956919|ref|YP_004168182.1| DNA-cytosine methyltransferase [Nitratifractor salsuginis DSM
16511]
gi|319419323|gb|ADV46433.1| DNA-cytosine methyltransferase [Nitratifractor salsuginis DSM
16511]
Length = 394
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 125/357 (35%), Gaps = 74/357 (20%)
Query: 2 YGAHAWLL--SPPCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVKPPHMLFVENVV 56
Y H LL PCQ ++ G++K +D R + F ++++ +P LF ENV
Sbjct: 61 YQGHIDLLVGGSPCQSFSVAGIRKGVNDPRGALIYQFYRVVD----EARPKVFLF-ENVK 115
Query: 57 GFETSD---THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA------------ 101
GF + D T + Y +L+ +G+P +R RYF +
Sbjct: 116 GFRSIDKGQTREEFERAFRLLGYTVHSAVLNTKHYGLPQNRERYFLVGFKSKTAGERFRF 175
Query: 102 -KRKPLSF-RCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDD--SWDKLLESCDPVERFL 157
K+ PL +L N++ D D D +WDK L D ++
Sbjct: 176 PKKVPLKLILSDVLENKV---DEKYYLTDKALEYMNRDTGDGRTNWDKGLH-YDTAKKI- 230
Query: 158 EFSNSGDQVNTETGF---------LSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLS-L 207
S N G + T++ +H + P +
Sbjct: 231 ---GSAVPANMHKGLPYAVLLQRPRGKNAGGLKALDGVCPTLDSSYFEHNNHIVEPGEPM 287
Query: 208 IERW-----GSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHL 262
IERW GS +D + P K ++ + + K H+
Sbjct: 288 IERWANSKIGSVLDTIAPTIKANSMYSDI-------------------RNRPRIHKNGHI 328
Query: 263 RYFTPREVANLHSFPG---DFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQAG 316
R TP+E L FP D +S QRY GNS+S+ V+ L + + G
Sbjct: 329 RKITPKECWRLQGFPDWAHDSAKDAGVSDTQRYKQAGNSMSVPVIEALFRSIAIATG 385
>gi|299536257|ref|ZP_07049570.1| DNA-methyltransferase MKpn2kI [Lysinibacillus fusiformis ZC1]
gi|298728243|gb|EFI68805.1| DNA-methyltransferase MKpn2kI [Lysinibacillus fusiformis ZC1]
Length = 403
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 48/107 (44%), Gaps = 6/107 (5%)
Query: 5 HAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD- 62
H LL+ PCQ +++ GL++ D R F + +I K P +ENV D
Sbjct: 132 HNILLAGFPCQAFSQAGLKQGFEDTRGTLFFDVARIIAE--KRPDAFLLENVKNLRNHDK 189
Query: 63 --THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 107
T K+ E L DY + +L FGVP +R R F + K +
Sbjct: 190 GRTFTKIKETLEGLDYTFEAKVLRAADFGVPQNRERVFMVGFNKRIG 236
>gi|404379848|ref|ZP_10984897.1| DNA (cytosine-5-)-methyltransferase [Simonsiella muelleri ATCC
29453]
gi|404294517|gb|EFG32046.2| DNA (cytosine-5-)-methyltransferase [Simonsiella muelleri ATCC
29453]
Length = 339
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 5/99 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQ ++ GL+K +D R F + + + P +LF+ENV GF+ D T A +
Sbjct: 96 PCQAFSVAGLRKGFADTRGTLFFDVARIAEY--HKPKILFLENVKGFKNHDKGNTFATVK 153
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 107
L Y +L+ FGVP +R R + +A R +
Sbjct: 154 LTLEQLGYRVYADVLNAKNFGVPQNRERIYIVAIRNDFN 192
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 263 RYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 312
R TPRE + L FP DF P +S Q Y GNS+++ V+ L Q ++
Sbjct: 283 RKLTPREASLLQGFPSDFVIP--VSDVQAYKQFGNSVAVPVIKALAQEIY 330
>gi|430377053|ref|ZP_19431186.1| hypothetical protein MOMA_06646 [Moraxella macacae 0408225]
gi|429540190|gb|ELA08219.1| hypothetical protein MOMA_06646 [Moraxella macacae 0408225]
Length = 335
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 5/97 (5%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---TH 64
L PCQ ++ GL+K D R F + + H P ++F+ENV GF+ D T
Sbjct: 87 LAGFPCQAFSVAGLRKGFEDTRGTLFFDVARIAKH--HRPKLIFLENVKGFKNHDKGNTF 144
Query: 65 AKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
+ L + Y IL+ FG+P +R R + +A
Sbjct: 145 KVVKRTLEDLGYRVYADILNAKNFGIPQNRERIYIIA 181
>gi|288906872|emb|CBJ21706.1| type II DNA modification methyltransferase [Streptococcus mitis B6]
Length = 380
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 124/325 (38%), Gaps = 45/325 (13%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G ++ D R F +I ++ P LF+ENV G D A I+
Sbjct: 75 PCQAFSIAGNRRGFEDTRGTLFFEIARFA--SILRPKYLFLENVRGLLNHDGGATFETII 132
Query: 72 ANSDYLTQEF---ILSPLQFGVPYSRPRYFCLA------KRK--PLSFRCQLLNNQLLRS 120
D L + +L+ FGVP +R R F + RK PLS Q +++Q +
Sbjct: 133 RTLDELGYDVEWQVLNSKNFGVPQNRERVFIIGHLRGTSGRKVFPLSGENQSISSQSVMK 192
Query: 121 PSPL--LGNDDMTVITKHD-------QPDDSWDKLLESCDPVERFLEFSNSGDQVNT--E 169
+ GN + + D K+ + +++F + +Q E
Sbjct: 193 IGNVNPSGNGMNGEVYQADGLAPTLTTNKGEGQKIAIKSNAIKQFGVLQPNFNQCGVVYE 252
Query: 170 TGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFT 229
T ++ A G E + V S + + G ++++ +P+SK
Sbjct: 253 TDGIAPTIRAYQG-GGLEPKIRVKEATSKGYAEAEV------GDSVNLSHPNSKTRRGRV 305
Query: 230 KSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLR 289
TG ++P + +R TPRE L FP D+ F +
Sbjct: 306 GKQVANTLLTGESQGVIEP----------DFRIRKLTPRECWRLQGFP-DWAFDKAQEVN 354
Query: 290 ---QRYALLGNSLSIAVVAPLLQYL 311
Q Y GNS+++ V+A + + L
Sbjct: 355 SNSQLYKQAGNSVTVNVIAAIAKEL 379
>gi|422304470|ref|ZP_16391815.1| Modification methylase NgoBI [Microcystis aeruginosa PCC 9806]
gi|389790376|emb|CCI13741.1| Modification methylase NgoBI [Microcystis aeruginosa PCC 9806]
Length = 324
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 15/132 (11%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV---GFETSDTHAKMI 68
PCQP++ G K D R F +I ++ K P +ENV G + T ++
Sbjct: 84 PCQPFSICGDLKGFEDTRGTLFFEIARILK--AKQPAAFILENVKQLQGHQQGKTLQVIL 141
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGND 128
+ L + DY T +L+ L FG+P R R F + R+ F P P L
Sbjct: 142 DTLQDLDYYTDYRVLNALNFGLPQKRERIFIVGFREARGFIW----------PKPALSRT 191
Query: 129 DMTVITKHDQPD 140
+T I + + D
Sbjct: 192 SLTEILEENVSD 203
>gi|149369548|ref|ZP_01889400.1| C-5 cytosine-specific DNA-methylase [unidentified eubacterium
SCB49]
gi|149356975|gb|EDM45530.1| C-5 cytosine-specific DNA-methylase [unidentified eubacterium
SCB49]
Length = 421
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQ ++ G + D R F + E+I K P +F+ENV G D T A ++
Sbjct: 167 PCQAFSIAGKRGGFEDTRGTLFFDVAEIIKR--KKPKAIFLENVKGLRNHDKGKTLATIL 224
Query: 69 EILAN--SDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 107
+L + Y+ + IL+ +FGVP +R R F + RK L
Sbjct: 225 NVLREDLNYYVPEPQILNAKKFGVPQNRERIFIVGFRKDLG 265
>gi|440683449|ref|YP_007158244.1| DNA-cytosine methyltransferase [Anabaena cylindrica PCC 7122]
gi|428680568|gb|AFZ59334.1| DNA-cytosine methyltransferase [Anabaena cylindrica PCC 7122]
Length = 449
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 138/330 (41%), Gaps = 58/330 (17%)
Query: 10 SPPCQPYTRQG--LQKQSSDARAFSFLK-ILELIPHTVKPPHMLFVENVVGFETSDTHAK 66
PPCQ ++ G L ++ F +++ +LEL P + +ENV G
Sbjct: 107 GPPCQGFSLIGKRLLDDPRNSLVFHYIRLVLEL------QPKFVVLENVKGMTVGKHREF 160
Query: 67 MIEIL---ANSDY-LTQEF-ILSPLQFGVPYSRPRYFCLAKRKPLSF------------R 109
++E++ A +Y + Q++ +L+ +GVP +R R F LA R+ L +
Sbjct: 161 ILEVISAFAAINYKVYQDYQVLNAANYGVPQNRERLFLLACRQDLDLPNYPQPITTYIKK 220
Query: 110 CQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTE 169
+ +NNQLL +PS D+ +I + + + D +L R+++ N +
Sbjct: 221 KKAINNQLLLTPSVKKALQDLPIIENYPELYEQ-DWILADFGKSSRYVQRLNGFNSKFNN 279
Query: 170 TGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAM-DIVYPDSKRCCCF 228
+ + + EV I+R+ + + P S+ F
Sbjct: 280 YSYKRIYDPKILTSSLRTKHTEVS--------------IQRFAETLPGKIEPISR----F 321
Query: 229 TKSYYRYVKGTGSLLATVQPKNKGKASSLKEQH---LRYFTPREVANLHSFPGDFQFPHH 285
K Y KG + L NKG +S + H R T RE A LHS+P F+F H
Sbjct: 322 YKLDY---KGICNTLRAGTASNKGAFTSPRPIHPFIPRCITVREAARLHSYPDWFRF--H 376
Query: 286 LSLRQRYALLGNS----LSIAVVAPLLQYL 311
++ + +GNS L+ A+ + +++ L
Sbjct: 377 VTKWHGFRQIGNSVPPLLAKAIASEIIKAL 406
>gi|415747050|ref|ZP_11475794.1| DNA (cytosine-5) methyltransferase [Campylobacter jejuni subsp.
jejuni 327]
gi|315931535|gb|EFV10502.1| DNA (cytosine-5) methyltransferase [Campylobacter jejuni subsp.
jejuni 327]
Length = 284
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 10/125 (8%)
Query: 5 HAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD- 62
H LL+ PCQ ++ G +K +D R F + ++ P ++F+ENV GF+ D
Sbjct: 71 HNILLAGFPCQAFSIAGHRKGFNDIRGTLFFDVARIVKK--HKPEIVFLENVKGFKNHDK 128
Query: 63 --THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA----KRKPLSFRCQLLNNQ 116
T + + L + Y +L+ FG+P +R R + +A K K +SF L N
Sbjct: 129 GKTFSVVKNTLEDMGYDVFSEVLNARNFGIPQNRERIYIVAFLKNKFKNISFNFNELKNI 188
Query: 117 LLRSP 121
++S
Sbjct: 189 EIKSK 193
>gi|159795737|pdb|2Z6A|A Chain A, S-Adenosyl-L-Methionine-Dependent Methyl Transfer:
Observable Precatalytic Intermediates During Dna
Cytosine Methylation
Length = 327
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 110/309 (35%), Gaps = 73/309 (23%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
P Q ++ G QK D+R F I ++ K P ++F+ENV F + D + +E++
Sbjct: 80 PAQAFSISGKQKGFEDSRGTLFFDIARIVRE--KKPKVVFMENVKNFASHD-NGNTLEVV 136
Query: 72 ANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGN 127
N+ DY +L+ L +G+P R R + + R LN Q + P P N
Sbjct: 137 KNTMNELDYSFHAKVLNALDYGIPQKRERIYMICFRND-------LNIQNFQFPKPFELN 189
Query: 128 DDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAE 187
T + PD + L+ ++R D V T T
Sbjct: 190 ---TFVKDLLLPDSEVEHLV-----IDR-------KDLVMTNQEIEQTTPKT-------- 226
Query: 188 ETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQ 247
V L ++ + G I S R T S Y G G T
Sbjct: 227 ---------------VRLGIVGKGGQGERIY---STRGIAITLSAY----GGGIFAKT-- 262
Query: 248 PKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPL 307
L R PRE A + +P ++ H S Q Y GNS VV +
Sbjct: 263 ------GGYLVNGKTRKLHPRECARVMGYPDSYKV--HPSTSQAYKQFGNS----VVINV 310
Query: 308 LQYLFAQAG 316
LQY+ G
Sbjct: 311 LQYIAYNIG 319
>gi|260913722|ref|ZP_05920198.1| modification methylase NgoPII [Pasteurella dagmatis ATCC 43325]
gi|260632261|gb|EEX50436.1| modification methylase NgoPII [Pasteurella dagmatis ATCC 43325]
Length = 329
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 111/307 (36%), Gaps = 77/307 (25%)
Query: 10 SPPCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
PPCQ ++ G + +DAR F +++IL+ K P ENV G S+
Sbjct: 70 GPPCQSWSEAGSLRGINDARGQLFFDYIRILK-----SKQPKFFLAENVSGMLANRHSEA 124
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSP 123
++++ + Y +++ +GV R R F + RK LS Q P
Sbjct: 125 VQNILKMFEDCGYDVTLTMVNAKDYGVAQERKRVFYIGFRKDLSISFQF--------PIG 176
Query: 124 LLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDF 183
ND+ + K D WD L E+ P + ++ VN F TG
Sbjct: 177 STVNDEDKITLK----DIIWD-LQETAVPA--LAQNKSNPQAVNNNEYF--TG------- 220
Query: 184 GAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCC---------FTKSYYR 234
S + + ++ W V ++C + + YR
Sbjct: 221 -------------SFSPIFMSRNRVKSWNEQGFTVQASGRQCQLHPQAPKMEKYGINDYR 267
Query: 235 YVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYAL 294
+V G KE R T REVA + FP DF+F + + Y +
Sbjct: 268 FVVG-------------------KENLYRRMTIREVARVQGFPDDFKFIYQ-NTNDAYKM 307
Query: 295 LGNSLSI 301
+GN++ +
Sbjct: 308 IGNAVPV 314
>gi|419652936|ref|ZP_14183979.1| hypothetical protein cje146_08282 [Campylobacter jejuni subsp.
jejuni 2008-894]
gi|380627593|gb|EIB45971.1| hypothetical protein cje146_08282 [Campylobacter jejuni subsp.
jejuni 2008-894]
Length = 256
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 10/125 (8%)
Query: 5 HAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD- 62
H LL+ PCQ ++ G +K +D R F + ++ P ++F+ENV GF+ D
Sbjct: 71 HNILLAGFPCQAFSIAGHRKGFNDIRGTLFFDVARIVKKH--KPEIVFLENVKGFKNHDK 128
Query: 63 --THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA----KRKPLSFRCQLLNNQ 116
T + + L + Y +L+ FG+P +R R + +A K K +SF L N
Sbjct: 129 GKTFSVVKNTLEDMGYDVFSEVLNARNFGIPQNRERIYIVAFLKNKFKNISFNFNELKNI 188
Query: 117 LLRSP 121
++S
Sbjct: 189 EIKSK 193
>gi|260591129|ref|ZP_05856587.1| modification methylase AluI [Prevotella veroralis F0319]
gi|260536994|gb|EEX19611.1| modification methylase AluI [Prevotella veroralis F0319]
Length = 452
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 12 PCQPYTRQGLQKQSSDA--RAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHA--KM 67
PCQP+++ G Q+ D R F KI+E++ + P +F+ENV ++ D K+
Sbjct: 79 PCQPFSQAGKQQGFGDEKDRGNLFYKIMEILEY--HKPEFVFLENVPNLKSHDNKNTYKV 136
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
I +S Y + I+SP FG+P+ R R + + + K
Sbjct: 137 IHSQLSSLYEVADDIISPHYFGIPHHRNRMYIVGRLK 173
>gi|254413051|ref|ZP_05026823.1| C-5 cytosine-specific DNA methylase superfamily [Coleofasciculus
chthonoplastes PCC 7420]
gi|196180215|gb|EDX75207.1| C-5 cytosine-specific DNA methylase superfamily [Coleofasciculus
chthonoplastes PCC 7420]
Length = 353
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 5/103 (4%)
Query: 3 GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG--FET 60
GA + PPCQP++ G Q+ D+R F L+ + + +P LF ENV G F
Sbjct: 83 GADVIIGGPPCQPFSVGGHQRGLKDSRD-GFPIFLDAV-KSYRPQLALF-ENVRGMLFRN 139
Query: 61 SDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 103
+++ L +Y+ + IL+ +GVP R R FC+A R
Sbjct: 140 KTYFEEIVSALRELNYIVEWEILNAADYGVPQRRERLFCVAHR 182
>gi|154497795|ref|ZP_02036173.1| hypothetical protein BACCAP_01773 [Bacteroides capillosus ATCC
29799]
gi|150273293|gb|EDN00438.1| DNA (cytosine-5-)-methyltransferase [Pseudoflavonifractor
capillosus ATCC 29799]
Length = 222
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF---ETSDTHAKMI 68
PCQ ++ G +K DAR F +I L + P L +ENV G ++ T A ++
Sbjct: 69 PCQAFSLAGRRKGFDDARGTLFFEIARLA--EARRPAYLLLENVPGLLNHDSGRTFAAIL 126
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRC 110
L++ Y + +L+ FGVP SR R F + P RC
Sbjct: 127 ATLSDLGYCVEWSVLNSKHFGVPQSRKRVFLICYLDP---RC 165
>gi|345808802|gb|AEO17041.1| type II modification DNA-cytosine methyltransferase [Bacillus sp.
N16-5]
Length = 372
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 59/145 (40%), Gaps = 19/145 (13%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAK----- 66
PCQ ++ G +K S R + ++ ++ H M ENV G T+ +
Sbjct: 105 PCQDFSLAGKRKGLSSERGRLYEHMIRVVKHC--NAKMFVAENVDGIRTNKANKTVDASA 162
Query: 67 ---MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLL--RSP 121
++E S Y+ Q +L+ FGVP +R R RK + N + +S
Sbjct: 163 LDTILENFEKSGYIVQYKVLNAADFGVPQTRKRVIIFGVRKDIY-------NAIYYPKSS 215
Query: 122 SPLLGNDDMTVITKHDQPDDSWDKL 146
LG +T D DD WDK+
Sbjct: 216 HSELGGFGQPWVTSKDALDDIWDKI 240
>gi|399926077|ref|ZP_10783435.1| DNA-cytosine methyltransferase, partial [Myroides injenensis
M09-0166]
Length = 444
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 12 PCQPYTRQGLQKQSSDA--RAFSFLKILELIPHTVKPPHMLFVENVVGFETSD--THAKM 67
PCQP+++ G Q+ +D R F KI+E++ H P +F+ENV ++ D +
Sbjct: 74 PCQPFSQAGSQQGFNDEKDRGNLFYKIMEILQH--HKPEFVFLENVPNLKSHDDGNTYTV 131
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
I+ + Y Q+ I+SP FG+P R R + + + K
Sbjct: 132 IKNELETLYEVQDDIISPHYFGIPQHRTRIYIVGRLK 168
>gi|440753140|ref|ZP_20932343.1| modification methylase HhaI [Microcystis aeruginosa TAIHU98]
gi|440177633|gb|ELP56906.1| modification methylase HhaI [Microcystis aeruginosa TAIHU98]
Length = 331
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 15/132 (11%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV---GFETSDTHAKMI 68
PCQP++ G K D R F +I ++ K P +ENV G + T ++
Sbjct: 84 PCQPFSICGNLKGFEDTRGTLFFEIARILK--AKQPAAFILENVKQLQGHQQGKTLQVIL 141
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGND 128
+ L + DY T +L+ L FG+P R R F + R+ F P P L
Sbjct: 142 DTLQDLDYYTDYRVLNALNFGLPQKRERIFIVGFRETRGFIW----------PKPALSRT 191
Query: 129 DMTVITKHDQPD 140
+T I + + D
Sbjct: 192 SLTEILEENVSD 203
>gi|157414453|ref|YP_001481709.1| hypothetical protein C8J_0133 [Campylobacter jejuni subsp. jejuni
81116]
gi|283955585|ref|ZP_06373079.1| hypothetical protein C1336_000030018 [Campylobacter jejuni subsp.
jejuni 1336]
gi|157385417|gb|ABV51732.1| hypothetical protein C8J_0133 [Campylobacter jejuni subsp. jejuni
81116]
gi|283792928|gb|EFC31703.1| hypothetical protein C1336_000030018 [Campylobacter jejuni subsp.
jejuni 1336]
Length = 321
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 12/125 (9%)
Query: 5 HAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDT 63
H LL+ PCQ ++ G +K +D R F + ++ P ++F+ENV GF+ D
Sbjct: 71 HNILLAGFPCQAFSIAGHRKGFNDIRGTLFFDVARIVKK--HKPEIVFLENVKGFKNHDK 128
Query: 64 HAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLA----KRKPLSFRCQLLNN 115
K ++ N+ Y +L+ FG+P +R R + +A K K +SF L N
Sbjct: 129 -GKTFSVVKNTLEDMGYDVFSEVLNARNFGIPQNRERIYIVAFLKNKFKNISFNFNELKN 187
Query: 116 QLLRS 120
++S
Sbjct: 188 IEIKS 192
>gi|119026301|ref|YP_910146.1| DNA-methyltransferase MKpn2kI [Bifidobacterium adolescentis ATCC
15703]
gi|118765885|dbj|BAF40064.1| DNA-methyltransferase MKpn2kI [Bifidobacterium adolescentis ATCC
15703]
Length = 383
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQ +++ GL+K DAR F +I ++ K P +ENV VG + +T +
Sbjct: 142 PCQAFSQAGLKKGFEDARGTMFFEIARILKE--KRPKAFLLENVKNLVGHDHGNTFRTIK 199
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
IL Y +L+ FGVP +R R + +
Sbjct: 200 SILEGLGYAVNAKVLAAKDFGVPQNRERIYIVG 232
>gi|373117713|ref|ZP_09531857.1| DNA (cytosine-5-)-methyltransferase [Lachnospiraceae bacterium
7_1_58FAA]
gi|371668110|gb|EHO33221.1| DNA (cytosine-5-)-methyltransferase [Lachnospiraceae bacterium
7_1_58FAA]
Length = 379
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 121/330 (36%), Gaps = 58/330 (17%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQ ++ G +K DAR F +I L + P L +ENV G D T A ++
Sbjct: 69 PCQAFSLAGRRKGFDDARGTLFFEIARLA--ETRRPSYLLLENVPGLLNHDGGRTFAAIL 126
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGND 128
L++ Y + +L+ FGVP SR R F + P RC ++L P+ GN
Sbjct: 127 SALSDLGYHVEWAVLNSKHFGVPQSRRRVFLICYLDP---RCA---GKIL----PVFGNG 176
Query: 129 DMTVI--TKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAA 186
+I Q +D +C V T L VD
Sbjct: 177 AKALIQLIGGAQGHRVYDPEGVACTQTAGGGGLG-----VKTGLYLLPPDAPFVDLCAGH 231
Query: 187 EETVEVDRCVSIDHFLVPLS----------LIERW----------GSAMDIVYPDSKRCC 226
+ + RC++ + LS LI+ G ++D+ YP S
Sbjct: 232 PKRTQQSRCITARYGQTTLSNHKAERSGALLIKEATRKGYQEAAPGDSVDLGYPGS---- 287
Query: 227 CFTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHL 286
R G A+VQ + + +R PRE L F D Q L
Sbjct: 288 --ATRAGRVGVGVAHDAASVQGIVE------RGGRIRRLMPRECLRLQGFD-DEQIDKIL 338
Query: 287 SLR---QRYALLGNSLSIAVVAPLLQYLFA 313
++ Q Y GNS+++ V+ + + + A
Sbjct: 339 AINSDAQAYKQAGNSVTVTVIEAIGRRIRA 368
>gi|384897195|ref|YP_005772623.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Lithuania75]
gi|317012300|gb|ADU82908.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Lithuania75]
Length = 348
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 127/318 (39%), Gaps = 57/318 (17%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGFETSDTHAK 66
L PPCQ Y+ G +K A F +L++L+L+ P + ENVVG S +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFVFENVVGL-MSMQKGQ 124
Query: 67 MIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPS 122
+ + + N+ Y+ + IL+ L +GVP R R + K SF+ Q SP
Sbjct: 125 LFQQICNAFKERGYILEHAILNALDYGVPQIRERVILVGTLK--SFK------QKFHSPK 176
Query: 123 PLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDD 182
P I H D+ L P++ +GD + G+L +
Sbjct: 177 P---------IKTHFSLKDA----LGDLPPIQS----GENGDAL----GYLKNADNVFLE 215
Query: 183 FGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYY--RYVKGTG 240
F + + + L+ + + G + D + P+S R KS Y Y K
Sbjct: 216 FVRNSKELSEHSSPKNNEKLIKIMQTLKDGQSKDDL-PESLR----PKSGYINTYAKMWW 270
Query: 241 SLLATVQPKNKGKASSLKEQH---LRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGN 297
A +N SS + H R + RE A L SFP D++F S ++ +GN
Sbjct: 271 EKPAPTITRNFSTPSSSRCIHPRDSRALSIREGARLQSFPDDYKFCGSASAKRLQ--IGN 328
Query: 298 SLSIAVVAPLLQYLFAQA 315
+ V PLL AQA
Sbjct: 329 A-----VPPLLSVALAQA 341
>gi|399925718|ref|ZP_10783076.1| DNA-cytosine methyltransferase [Myroides injenensis M09-0166]
Length = 329
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 8/95 (8%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQP++ G +K D R F +ILE + T++P ++F+ENV +T D +++
Sbjct: 79 PCQPFSVAGYRKGFDDHRGNHFFRILEFVD-TIRPK-VVFLENVKNLKTHD-KGNTFKVI 135
Query: 72 ANS----DYLTQEFILSPLQFG-VPYSRPRYFCLA 101
NS +Y Q +L+ +G +P++R R F +A
Sbjct: 136 ENSLRERNYSFQAQVLNTKSYGNIPHNRERIFMVA 170
>gi|331091354|ref|ZP_08340194.1| hypothetical protein HMPREF9477_00837 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330404515|gb|EGG84059.1| hypothetical protein HMPREF9477_00837 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 391
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 134/344 (38%), Gaps = 72/344 (20%)
Query: 12 PCQPYTRQGLQKQSSD-ARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEI 70
PCQ +++ G QK D R F +I+ ++ + P + +ENV TS H +
Sbjct: 73 PCQAFSKAGYQKGFEDETRGTLFFEIVRILKYHRTP--YIILENVRNL-TSHDHGNTWRV 129
Query: 71 LANS----DYLTQE--FILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPL 124
+ ++ Y+ E I+SP Q GVP R R L L Q LN +L P
Sbjct: 130 IKSALHELGYIITEEPIIISPHQLGVPQFRERVVILGIHSSLGI--QNLNIEL-----PD 182
Query: 125 LGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAV---- 180
DD+ +T +LE+ D E++ S+ + F+ V
Sbjct: 183 KSKDDINFLTS---------GILETTDVDEKYYISSHEEKVLICWDEFIKGIKEKVIGFP 233
Query: 181 ---DDFGAAEET------------VEVDRCVSIDHFLVPLSLIERWGSAMDIVYPD---- 221
D+FG + ++ +R + ++ S E+W + D +
Sbjct: 234 IWFDEFGKTYDYTDLGYADWKVKFIQKNRQLYENNKEFIDSWREKWNNLEDFTMTEKKFE 293
Query: 222 ---SKRCCCFTKSYYRYVKGTG----------SLLATVQPKNKGKASSLKEQHLRYFTPR 268
K C ++ ++ + +G +L+A VQ G R TPR
Sbjct: 294 WQCGKDCSSVWEALIQF-RPSGVRVKRPSVFPALVAMVQIPVIGSVR-------RRLTPR 345
Query: 269 EVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 312
E A L SFP F + + RQ Y GN++++ V+ + + LF
Sbjct: 346 EAARLQSFPD--TFICNPNDRQAYKQFGNAVNVRVIQYMGEQLF 387
>gi|443654424|ref|ZP_21131346.1| cytosine-specific methyltransferase [Microcystis aeruginosa
DIANCHI905]
gi|159026805|emb|CAO86650.1| ngoBIM [Microcystis aeruginosa PCC 7806]
gi|443333816|gb|ELS48356.1| cytosine-specific methyltransferase [Microcystis aeruginosa
DIANCHI905]
Length = 331
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 15/132 (11%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV---GFETSDTHAKMI 68
PCQP++ G K D R F +I ++ K P +ENV G + T ++
Sbjct: 84 PCQPFSICGDLKGFEDTRGTLFFEIARIL--KAKQPAAFILENVKQLQGHQQGKTLEVIL 141
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGND 128
+ L + DY T +L+ L FG+P R R F + R+ F P P L
Sbjct: 142 DTLQDLDYYTDYRVLNALNFGLPQKRERIFIVGFREARGFIW----------PKPALSRT 191
Query: 129 DMTVITKHDQPD 140
+T I + + D
Sbjct: 192 SLTEILEENVSD 203
>gi|416250697|ref|ZP_11637377.1| DcmB [Moraxella catarrhalis CO72]
gi|326574028|gb|EGE23977.1| DcmB [Moraxella catarrhalis CO72]
Length = 337
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/297 (19%), Positives = 101/297 (34%), Gaps = 57/297 (19%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF---ETSDTHAK 66
PPCQ ++ G + +DAR F + ++ + K P ENV G SD
Sbjct: 70 GPPCQSWSEAGALRGINDARGQLFYDYIRILKN--KQPKFFLAENVSGMLANRHSDAVKS 127
Query: 67 MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLG 126
++ + + Y +++ +GV R R F + RK L+ P
Sbjct: 128 ILNMFDDCGYDVTVNMVNAKNYGVAQERKRVFYIGFRKDLAINFNF--------PIGSTA 179
Query: 127 NDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAA 186
DD + K D WD T AA+D
Sbjct: 180 EDDNKITLK----DVIWD---------------------------LQQTAVAALDKNQTN 208
Query: 187 EETVEVDR--CVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLA 244
+ + + S + + ++ W V ++C ++ GT
Sbjct: 209 PKAINNNEYFIGSFSPIYMSRNRVKAWHEQGFTVQASGRQCQLHPQAPKMQKHGTNDFRF 268
Query: 245 TVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSI 301
+ KE R T REVA + FP DF+F + ++ Y ++GN++ +
Sbjct: 269 AIG----------KEHLYRRMTVREVARIQGFPDDFKFIYQ-NVNDGYKMIGNAVPV 314
>gi|193216537|ref|YP_001999779.1| cytosine-specific methyltransferase, related to HhaI [Mycoplasma
arthritidis 158L3-1]
gi|193001860|gb|ACF07075.1| cytosine-specific methyltransferase, related to HhaI [Mycoplasma
arthritidis 158L3-1]
Length = 327
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 55/104 (52%), Gaps = 11/104 (10%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G Q+ D+R F + ++ K P ++F+ENV F + D + ++++
Sbjct: 80 PCQAFSISGKQRGFQDSRGTLFFDVARIV--RAKKPKVVFMENVKNFASHD-NGNTLKVV 136
Query: 72 ANS------DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 109
N+ D+ ++ +L+ L FGVP R R + + R+ L+ +
Sbjct: 137 RNTMIDLGYDFYSE--VLNSLNFGVPQKRERIYMVCFRRDLNIK 178
>gi|410643136|ref|ZP_11353638.1| DNA (cytosine-5-)-methyltransferase [Glaciecola chathamensis S18K6]
gi|410137314|dbj|GAC11825.1| DNA (cytosine-5-)-methyltransferase [Glaciecola chathamensis S18K6]
Length = 356
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTH---AK 66
PPCQ ++++G + +D R F FLK +E + V P +ENV G T++ +
Sbjct: 77 GPPCQGFSQKGKRIGLNDERNFLFLKYIECV--EVINPIAFVIENVPGLLTNEGGFFLNE 134
Query: 67 MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 103
+IE L Y E +L+ +GVP +R R F + R
Sbjct: 135 IIEKLQGLGYSLFERVLNASDYGVPQNRKRAFIVGLR 171
>gi|425443062|ref|ZP_18823294.1| Modification methylase NgoBI [Microcystis aeruginosa PCC 9717]
gi|389715722|emb|CCH99951.1| Modification methylase NgoBI [Microcystis aeruginosa PCC 9717]
Length = 331
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 15/132 (11%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV---GFETSDTHAKMI 68
PCQP++ G K D R F +I ++ K P +ENV G + T ++
Sbjct: 84 PCQPFSICGDLKGFEDTRGTLFFEIARILK--AKQPAAFILENVKQLQGHQQGKTLEVIL 141
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGND 128
+ L + DY T +L+ L FG+P R R F + R+ F P P L
Sbjct: 142 DTLQDLDYYTDYRVLNALNFGLPQKRERIFIVGFREARGFIW----------PKPALSRT 191
Query: 129 DMTVITKHDQPD 140
+T I + + D
Sbjct: 192 TLTEILEENVSD 203
>gi|399116811|emb|CCG19620.1| modification methylase HhaI [Taylorella asinigenitalis 14/45]
Length = 324
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 5/99 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G + D+R F ++ ++ K P ++F+ENV F T D + +
Sbjct: 80 PCQAFSISGKRLGFEDSRGTLFFDVIRIVKD--KKPKVVFLENVSYFGTHDQGRTLRVVH 137
Query: 72 ANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRKPLS 107
N L +F +L+P FG+P +RPR + +A R+ +
Sbjct: 138 YNFYKLGYKFYSKVLNPCDFGIPQNRPRLYMIALREDIK 176
>gi|166367724|ref|YP_001659997.1| modification methylase NgoBI [Microcystis aeruginosa NIES-843]
gi|425464491|ref|ZP_18843804.1| Modification methylase NgoBI [Microcystis aeruginosa PCC 9809]
gi|166090097|dbj|BAG04805.1| modification methylase NgoBI [Microcystis aeruginosa NIES-843]
gi|389833509|emb|CCI21930.1| Modification methylase NgoBI [Microcystis aeruginosa PCC 9809]
Length = 330
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 15/132 (11%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV---GFETSDTHAKMI 68
PCQP++ G K D R F +I ++ K P +ENV G + T ++
Sbjct: 84 PCQPFSICGDLKGFEDTRGTLFFEIARILK--AKQPAAFILENVKQLQGHQQGKTLEVIL 141
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGND 128
+ L + DY T +L+ L FG+P R R F + R+ F P P L
Sbjct: 142 DTLQDLDYYTDYRVLNALNFGLPQKRERIFIVGFREARGFIW----------PKPALSRT 191
Query: 129 DMTVITKHDQPD 140
+T I + + D
Sbjct: 192 TLTEILEENVSD 203
>gi|425468721|ref|ZP_18847714.1| Modification methylase NgoBI [Microcystis aeruginosa PCC 9701]
gi|389884620|emb|CCI35097.1| Modification methylase NgoBI [Microcystis aeruginosa PCC 9701]
Length = 331
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 15/132 (11%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV---GFETSDTHAKMI 68
PCQP++ G K D R F +I ++ K P +ENV G + T ++
Sbjct: 84 PCQPFSICGDLKGFEDTRGTLFFEIARILK--AKQPAAFILENVKQLQGHQQGKTLQVIL 141
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGND 128
+ L + DY T +L+ L FG+P R R F + R+ F P P L
Sbjct: 142 DTLQDLDYYTDYRVLNALHFGLPQKRERIFIVGFREARRFIW----------PKPALSRT 191
Query: 129 DMTVITKHDQPD 140
+T I + + D
Sbjct: 192 SLTEILEENVSD 203
>gi|410625897|ref|ZP_11336667.1| DNA (cytosine-5-)-methyltransferase [Glaciecola mesophila KMM 241]
gi|410154517|dbj|GAC23436.1| DNA (cytosine-5-)-methyltransferase [Glaciecola mesophila KMM 241]
Length = 430
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 12/103 (11%)
Query: 12 PCQPYTR----QGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
PCQP++ +G + ++ F L+ILE K P +ENV GF++ + M
Sbjct: 164 PCQPFSYSGRCEGFEDKTRGTLFFDVLRILE-----KKRPKFALLENVKGFKSHNKGETM 218
Query: 68 ---IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 107
++ L + Y IL+ +GVP R R++C+A RK L
Sbjct: 219 FIALKALEEAGYEPYWTILNSYDYGVPQYRERWYCVAIRKDLG 261
>gi|425460097|ref|ZP_18839579.1| Modification methylase NgoBI [Microcystis aeruginosa PCC 9808]
gi|389827241|emb|CCI21624.1| Modification methylase NgoBI [Microcystis aeruginosa PCC 9808]
Length = 331
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 15/132 (11%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV---GFETSDTHAKMI 68
PCQP++ G K D R F +I ++ K P +ENV G + T ++
Sbjct: 84 PCQPFSICGDLKGFEDTRGTLFFEIARILK--AKQPAAFILENVKQLQGHQQGKTLQVIL 141
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGND 128
+ L + DY T +L+ L FG+P R R F + R+ F P P L
Sbjct: 142 DTLQDLDYYTDYRVLNALNFGLPQKRERIFIVGFREARRFIW----------PKPALSRT 191
Query: 129 DMTVITKHDQPD 140
+T I + + D
Sbjct: 192 SLTEILEENVSD 203
>gi|448260666|ref|YP_007348760.1| cytosine-specific methyltransferase [Klebsiella phage KP27]
gi|370343475|gb|AEX26604.1| cytosine-specific methyltransferase [Klebsiella phage KP27]
Length = 303
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 6/108 (5%)
Query: 5 HAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD- 62
H LL+ PCQ +++ GL++ D R +IL +I K P +LF ENV T D
Sbjct: 64 HDILLAGFPCQAFSKAGLKQGMLDPRGTIIFEILRII--RAKKPSVLFFENVPQLLTHDK 121
Query: 63 --THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 108
T + +L + Y +++ FG+P R R F + R P+ F
Sbjct: 122 GNTFKTIYRLLQDEGYDIHYQVMNTKDFGLPQRRERVFIVCFRDPVFF 169
>gi|257060181|ref|YP_003138069.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802]
gi|256590347|gb|ACV01234.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802]
Length = 336
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 5/100 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQP++ G + D R F I ++ K P+ +ENV G + T ++
Sbjct: 95 PCQPFSICGKLQGFEDTRGTVFFDIARILKE--KKPYAFILENVKQLKGHQQGKTLKIIL 152
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 108
+IL + Y +L+ L F +P+ R R F + R PL F
Sbjct: 153 DILEDLGYYCDYKVLNALDFALPHKRERIFIVGFRDPLQF 192
>gi|134296266|ref|YP_001120001.1| DNA-cytosine methyltransferase [Burkholderia vietnamiensis G4]
gi|134139423|gb|ABO55166.1| DNA-cytosine methyltransferase [Burkholderia vietnamiensis G4]
Length = 384
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 125/314 (39%), Gaps = 42/314 (13%)
Query: 12 PCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVKPPHMLFVENVVGFETS---DTHA 65
PCQ + G Q AR+ + +L+ L+ IP +PP +L ENVVG ++ + +
Sbjct: 85 PCQDLSLAGKQAGIHAARSGLVWQWLRALDEIPE--RPP-VLVAENVVGLVSAHGGEGYL 141
Query: 66 KMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLL 125
++ L YL L ++ +P SRPR F +A R+ L +L+N+ + L
Sbjct: 142 QLHAALRERGYLVGAMKLDAARW-LPQSRPRIFVVAYRESLPLPAELVNDGPGWAHDTAL 200
Query: 126 GNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGA 185
++ + D W +P R ++ DQ + + + A+
Sbjct: 201 RRVRESLESASPAGSDGW-VWWALPEPPARAARLASVLDQ-SAKWSAVDAPPKALALIAP 258
Query: 186 AEETVEVD--RCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLL 243
A E+ D R + + P R G + + D C T KG S
Sbjct: 259 AHESQLRDEARQATSGVAVAPGYRRTRPGGQVVELRFDGLAGCLRTP------KGGSSRQ 312
Query: 244 ATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGN------ 297
VQ + G+A R+ TPRE A L P +RYAL G+
Sbjct: 313 LLVQSTDGGEAP----LQCRWLTPREAARLMGAP------------ERYALAGSATDAYA 356
Query: 298 SLSIAVVAPLLQYL 311
++ AV AP+ ++L
Sbjct: 357 AMGDAVAAPVARWL 370
>gi|152994008|ref|YP_001359729.1| cytosine-specific methyltransferase [Sulfurovum sp. NBC37-1]
gi|151425869|dbj|BAF73372.1| cytosine-specific methyltransferase [Sulfurovum sp. NBC37-1]
Length = 362
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 129/329 (39%), Gaps = 51/329 (15%)
Query: 5 HAWLL--SPPCQPYTRQGLQKQSSDA-RAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
H +LL PPCQ ++ + ++ D + F + + +KP +F ENVVGF++
Sbjct: 68 HPFLLFGGPPCQGFSVANTKTRNLDNPNNWMFREYCRFV-EDLKPDWFVF-ENVVGFKSF 125
Query: 62 DTHAKMIEI---LANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLL 118
D +E+ L + Y T +L+ FGVP R R+F + RK + + L
Sbjct: 126 DKGRFAVEVEKELKSLGYKTNSSVLNAADFGVPQYRNRFFIIGHRKEKG-GIKFDFDSLE 184
Query: 119 RSPSPLLGN--DDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTG 176
+ P +G D+ + D+ ++ K ++ P + + T
Sbjct: 185 KKPKVTVGEALKDLPSLKNGDKIKEAAYKRVKQVHPYVKLIR---------------RTS 229
Query: 177 TAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYV 236
A+ + V+R +I E W +A KR T S ++
Sbjct: 230 KKALQNHVTHSRPHIVERYEAIKQG-------ENWEAA-------KKRGLLETYSSTKHT 275
Query: 237 -KGTGSLLATVQP----KNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQR 291
G L +P N K+ + R + RE A L SFP DF F LS +Q+
Sbjct: 276 HSGIYKRLKEDEPAVTIANYRKSMLIHPHEHRGLSLREAARLQSFPDDFIFKGPLSFQQQ 335
Query: 292 YALLGNS----LSIAVVAPLLQYLFAQAG 316
+GN+ LS + ++Q A G
Sbjct: 336 Q--VGNAVPPLLSKVIFEKIIQLSSANVG 362
>gi|294661528|ref|YP_003579981.1| hypothetical protein KP-KP15_gp115 [Klebsiella phage KP15]
gi|292660689|gb|ADE34937.1| hypothetical protein [Klebsiella phage KP15]
Length = 308
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 6/108 (5%)
Query: 5 HAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD- 62
H LL+ PCQ +++ GL++ D R +IL +I K P +LF ENV T D
Sbjct: 64 HDILLAGFPCQAFSKAGLKQGMLDPRGTIIFEILRII--RAKKPSVLFFENVPQLLTHDK 121
Query: 63 --THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 108
T + +L + Y +++ FG+P R R F + R P+ F
Sbjct: 122 GNTFKTIYRLLQDEGYDIHYQVMNTKDFGLPQRRERVFIVCFRDPVFF 169
>gi|328543334|ref|YP_004303443.1| DNA methylase [Polymorphum gilvum SL003B-26A1]
gi|326415695|gb|ADZ72758.1| DNA methylase, C-5 cytosine-specific family [Polymorphum gilvum
SL003B-26A1]
Length = 418
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 122/320 (38%), Gaps = 32/320 (10%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIE 69
PPCQ ++ + + D RA F L L+ P L +ENV G + D + E
Sbjct: 98 GPPCQSFSHNNHHRSAVDERARLFEHYLTLV--GALNPKTLVMENVPGILSIDGGRVVDE 155
Query: 70 ILANSDYLTQEFI---LSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPS-PLL 125
ILA+ L + + LS +FG P R R F +A R + +LL N SP+
Sbjct: 156 ILASLKELGFDAVVGRLSAEEFGTPQLRRRVFIVASR--IGAASELLPNPTHWSPALAKW 213
Query: 126 GNDDMTVITKHDQPDDSWDKL-----LESCDPVERFLEFSNSGDQVNTETGFLSTGTAAV 180
G +P W + +E+ V+ +++S +
Sbjct: 214 GGPKERPAGATKRPVTVWQAIGDLPEIENGGGVQ-IAPWASSHPTTTYQREMRRAAPQLY 272
Query: 181 DDFGAAEETVEVDRCVSI----DHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYV 236
+ A +V +DR V + + VP L+ + M R TK Y R
Sbjct: 273 NHVCHALASVNLDRIVHVPEGGNWRNVPRDLLP---AGM-----KRARLQDHTKRYGRLS 324
Query: 237 KG--TGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYAL 294
+G ++L P ++ R + RE A L FP F+F +L + Y
Sbjct: 325 RGGFASTILTKCDPHWGAYVHPTQD---RTISVREAARLQGFPDSFRFAGD-NLSKHYTQ 380
Query: 295 LGNSLSIAVVAPLLQYLFAQ 314
+GN++ I V + + A
Sbjct: 381 VGNAVPIQVAQAIGSAVLAH 400
>gi|395802256|ref|ZP_10481509.1| DNA-cytosine methyltransferase [Flavobacterium sp. F52]
gi|395435497|gb|EJG01438.1| DNA-cytosine methyltransferase [Flavobacterium sp. F52]
Length = 328
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEI- 70
PCQP++ G +K D+R F KIL+ I P ++F+ENV + D M I
Sbjct: 74 PCQPFSLAGHRKGFKDSRGNHFFKILDFIDEM--RPKVVFLENVKNLKGHDKGNTMKVIQ 131
Query: 71 --LANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 101
+ +Y IL+ FG +P++R R F +A
Sbjct: 132 REIKKRNYTFDSAILNTKDFGNIPHNRERIFMIA 165
>gi|365852668|ref|ZP_09393036.1| putative modification methylase HaeIII, partial [Lactobacillus
parafarraginis F0439]
gi|363714400|gb|EHL97912.1| putative modification methylase HaeIII, partial [Lactobacillus
parafarraginis F0439]
Length = 363
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%), Gaps = 11/107 (10%)
Query: 12 PCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVKPPHMLFVENVVGFETSD---THA 65
PCQ ++ G + D R + + KILE + P M VENV G T D T
Sbjct: 110 PCQSFSYAGKKMGLDDTRGTLFYHYAKILEQVK-----PKMFLVENVKGLTTHDHGRTLK 164
Query: 66 KMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQL 112
MI++ N Y T +L+ FGV R R + R L+ Q
Sbjct: 165 TMIKVFENMGYKTIYKVLNAWDFGVAEKRERMILIGIRNDLNITYQF 211
>gi|417090983|ref|ZP_11956207.1| putative DNA methylase [Streptococcus suis R61]
gi|353533349|gb|EHC03007.1| putative DNA methylase [Streptococcus suis R61]
Length = 382
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 125/335 (37%), Gaps = 63/335 (18%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G + D R F I ++ P LF+ENV G D IL
Sbjct: 75 PCQAFSIAGKRAGFEDTRGTLFFDIARFA--SILRPKYLFLENVTGLLNHDNGNTFETIL 132
Query: 72 ANSD---YLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGND 128
D Y + + + FGVP +R R F + + S R P GND
Sbjct: 133 GALDELGYDAEWQVFNSKNFGVPQNRERVFIIGHLRGASGRAIF----------PFGGND 182
Query: 129 DMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTET--GFLSTGTAAVDDFGAA 186
T I DS + + R + S SGD V+ ++ L + T D A
Sbjct: 183 --TAI-------DSKQSKINKVGNI-RKMGRSQSGDVVSVDSLAPTLCSTTTQKDPLKVA 232
Query: 187 --------EETVEVDRCVSIDHF-LVPLSLIERWG------SAMDIVYPDSKRCCCF--- 228
EE + R D + L+ ++ G + + P+ + C
Sbjct: 233 IPVLTPDREEKRQNGRRFKTDSEPMFTLTAQDKHGVLVNDIKVVGTIEPNFNQSGCVYDP 292
Query: 229 --TKSYYRYVKGTGSLLATVQPKNKGKASSLKEQ-------HLRYFTPREVANLHSFPGD 279
R ++G G ++PK + ++ +EQ +R TPRE L FP D
Sbjct: 293 EGIAPTIRTMQGGG-----LEPKIAVREATAEEQGVVTPNFRIRKLTPRECWRLQGFP-D 346
Query: 280 FQFPHHLSLR---QRYALLGNSLSIAVVAPLLQYL 311
+ F ++ Q Y GNS+++ V+ + + L
Sbjct: 347 WAFDKAQAVNSNSQLYKQAGNSVTVNVIEAIARRL 381
>gi|386750888|ref|YP_006224108.1| type II DNA modification methyltransferase [Helicobacter pylori
Shi417]
gi|384557146|gb|AFH97614.1| type II DNA modification methyltransferase [Helicobacter pylori
Shi417]
Length = 348
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 118/312 (37%), Gaps = 45/312 (14%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L++L+L+ P M ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLVK-----PKMFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSP 123
++ DY+ + IL+ L +GVP R R + K SF+ Q P P
Sbjct: 126 FKQICNAFKERDYILEHAILNALDYGVPQIRERVILVGALK--SFK------QKFHFPKP 177
Query: 124 LLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDF 183
I H D+ L P++ +GD + G+L +F
Sbjct: 178 ---------IKTHFSLKDA----LGDLPPIQS----GENGDAL----GYLKNADNVFLEF 216
Query: 184 GAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLL 243
+ + + L+ + + G + D + + + +T +Y + +
Sbjct: 217 VRNSKELSEHSSPKNNEKLIKIMQTLKDGQSKDDLPKNLRPKSGYTNTYAKMWWEKPAPT 276
Query: 244 ATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAV 303
T + + + R + RE A L SFP +++F S ++ +GN+
Sbjct: 277 ITRNFSTPSSSRCIHPRDSRALSVREGARLQSFPDNYKFCGSTSAKR--LQIGNA----- 329
Query: 304 VAPLLQYLFAQA 315
V PLL A A
Sbjct: 330 VPPLLSVALAHA 341
>gi|421713201|ref|ZP_16152532.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R32b]
gi|407216567|gb|EKE86404.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R32b]
Length = 351
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 11/102 (10%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGFETSDTHAK 66
L PPCQ Y+ G +K A F +L++L+L+ P + ENVVG S +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLVK-----PKIFVFENVVGL-MSMQKGQ 124
Query: 67 MIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
+ + + N+ DY+ + IL+ L +GVP R R F + K
Sbjct: 125 LFQQICNAFKERDYILEHAILNALDYGVPQIRERVFLVGALK 166
>gi|392597870|gb|EIW87192.1| S-adenosyl-L-methionine-dependent methyltransferase [Coniophora
puteana RWD-64-598 SS2]
Length = 1113
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 20/113 (17%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAK----- 66
PCQP++R + ++++D++ + L +L + + +KP +++F ENV GF + A+
Sbjct: 703 PCQPHSRMNMYQRTTDSKTYLMLNLLSWVDY-IKPKYIMF-ENVRGFLSFRLRARQKNRH 760
Query: 67 -------------MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 106
+I L DY + +L +G P R R+F + R+ L
Sbjct: 761 TITGGIEMGGLKFLIRALTEMDYQCRFAVLQAAHYGTPQGRVRFFLVGARRGL 813
>gi|67924690|ref|ZP_00518097.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501]
gi|67853467|gb|EAM48819.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501]
Length = 420
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 5/99 (5%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---TH 64
L PCQP++ G + D R F ++ E I KP L +ENV G T D T
Sbjct: 70 LAGSPCQPFSYAGKHQGFGDTRGTLFFEV-ERILDKYKPDGFL-LENVRGLVTHDKGRTL 127
Query: 65 AKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 103
+I L + DY + F+L+ F VP +R R + + K+
Sbjct: 128 KTIINKLNDLDYSVEYFLLNSSNFNVPQNRVRIYIVGKK 166
>gi|260886138|ref|ZP_05736578.2| modification methylase EcoRII [Prevotella tannerae ATCC 51259]
gi|260850757|gb|EEX70626.1| modification methylase EcoRII [Prevotella tannerae ATCC 51259]
Length = 427
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQP++ G QK +D R F + +++ K P ++F+ENV + D T ++
Sbjct: 175 PCQPFSISGKQKGFADTRGTLFFDVCQILER--KHPSVVFLENVKHLQYHDGGRTLEVIL 232
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK-RKPLSF 108
E L Y T+ IL+ FGVP +R R + ++P F
Sbjct: 233 EKLKELGYHTEWKILNAADFGVPQNRERIIIIGSLKQPFVF 273
>gi|363890146|ref|ZP_09317490.1| hypothetical protein HMPREF9628_01932 [Eubacteriaceae bacterium
CM5]
gi|361965982|gb|EHL18935.1| hypothetical protein HMPREF9628_01932 [Eubacteriaceae bacterium
CM5]
Length = 320
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 6/120 (5%)
Query: 12 PCQPYTRQGLQK---QSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMI 68
PCQ ++R GL+K + S R+ + + +I + P ++ ENV G + A
Sbjct: 79 PCQDFSRSGLKKGGEKGSGTRSSLLFETIRIIEEMKEKPKVVLWENVKGVLDKNMRASFF 138
Query: 69 EILANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLL 125
L + L E IL+ + FG+P +R R F ++ F + L N RS L
Sbjct: 139 HYLKEMERLGYESKYKILNAMDFGIPQNRKRIFVVSILGQNDFDFETLKNAETRSIDDFL 198
>gi|423135700|ref|ZP_17123346.1| DNA (cytosine-5-)-methyltransferase [Myroides odoratimimus CIP
101113]
gi|371640804|gb|EHO06400.1| DNA (cytosine-5-)-methyltransferase [Myroides odoratimimus CIP
101113]
Length = 318
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHA--KMIE 69
PCQP++ G +K D R F +IL+ + + P ++F+ENV +T D K+IE
Sbjct: 74 PCQPFSIAGYRKGFDDHRGNHFFRILDFVD--IIRPKVVFLENVKNLKTHDKGITFKVIE 131
Query: 70 -ILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 101
L +Y Q +L+ +G +P++R R F +A
Sbjct: 132 NALRERNYSFQSAVLNTKDYGNIPHNRERIFIVA 165
>gi|157961098|ref|YP_001501132.1| DNA-cytosine methyltransferase [Shewanella pealeana ATCC 700345]
gi|157846098|gb|ABV86597.1| DNA-cytosine methyltransferase [Shewanella pealeana ATCC 700345]
Length = 406
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 16/114 (14%)
Query: 10 SPPCQPYTRQGLQKQS-----SDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD-- 62
PPCQP+++ G + +D RA + L+++ V P +L +ENV G SD
Sbjct: 76 GPPCQPFSKSGYWAKGDTDRLTDPRAETLTAYLDIV--KVALPQVLLLENVKGIAYSDKD 133
Query: 63 -------THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 109
T I N+ Y+ + ++ +GVP R R F +A R +F+
Sbjct: 134 EGLQLLITELNNINSEMNTSYMPEVITVNASSYGVPQHRERVFIVANRDGGTFK 187
>gi|423068782|ref|ZP_17057570.1| hypothetical protein HMPREF9682_00791 [Streptococcus intermedius
F0395]
gi|355366082|gb|EHG13801.1| hypothetical protein HMPREF9682_00791 [Streptococcus intermedius
F0395]
Length = 427
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 52/123 (42%), Gaps = 15/123 (12%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF---ETSDTHAKMI 68
PCQ ++ G ++ D R F +I ++ P LF+ENV G DT +I
Sbjct: 75 PCQAFSIAGNRRGFEDTRGTLFFEIARFA--SILRPKYLFLENVKGLLNHNRGDTFETII 132
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGND 128
L Y + +L+ FGVP +R R F + L + R+ PL GND
Sbjct: 133 RTLDELGYDVEWQVLNSKNFGVPQNRERVFIIGH----------LRGRSARAIFPLGGND 182
Query: 129 DMT 131
T
Sbjct: 183 KTT 185
>gi|52788777|gb|AAU87368.1| MnlI m5C-methyltransferase [Moraxella nonliquefaciens]
Length = 351
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 6/107 (5%)
Query: 6 AWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHA 65
A L PPCQ ++ +G + +D+R F F + LE++ P + +ENV
Sbjct: 72 AVLGGPPCQGFSLKGKKLGMNDSRNFLFQEYLEIVRQV--NPDFIVMENVKALTNKTNEY 129
Query: 66 KMIEILA---NSDYLTQEFILSPLQFGVPYSRPRYFCLA-KRKPLSF 108
+ +IL + Y +L+ +GVP SR R F +A K +P F
Sbjct: 130 FLTQILTGLKSMGYFVNYQVLNAKDYGVPQSRERIFIIATKNQPFDF 176
>gi|302347057|ref|YP_003815355.1| putative modification methylase HhaI [Prevotella melaninogenica
ATCC 25845]
gi|302150379|gb|ADK96640.1| putative modification methylase HhaI [Prevotella melaninogenica
ATCC 25845]
Length = 453
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 12 PCQPYTRQGLQKQSSD--ARAFSFLKILELIPHTVKPPHMLF--VENVVGFETSDTHAKM 67
PCQP+++ G ++ +D R F I++++ + KP +++ V N+ G + +T +
Sbjct: 76 PCQPFSQAGNRQGFNDEKGRGTLFDYIIDIVAYH-KPKYIILENVSNLKGHDNGNTWRII 134
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNN 115
E L +Y + ILSP +FG+P R R + + RK L LL+N
Sbjct: 135 QEKLDEQEYSVKAEILSPHEFGIPQHRKRIYIVCIRKDLG----LLDN 178
>gi|146298415|ref|YP_001193006.1| DNA-cytosine methyltransferase [Flavobacterium johnsoniae UW101]
gi|146152833|gb|ABQ03687.1| DNA-cytosine methyltransferase [Flavobacterium johnsoniae UW101]
Length = 329
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQP++ G +K D+R F KIL+ + P+++F+ENV + D I+++
Sbjct: 72 PCQPFSVAGYRKGFEDSRGNHFFKILDFVDEM--RPNVIFLENVKNLKGHDK-GNTIKVI 128
Query: 72 ANS----DYLTQEFILSPLQFG-VPYSRPRYFCLA 101
N Y +L+ FG +P++R R F +A
Sbjct: 129 ENEIRKRGYTFDSAVLNTKDFGNIPHNRERIFIVA 163
>gi|269123998|ref|YP_003306575.1| DNA-cytosine methyltransferase [Streptobacillus moniliformis DSM
12112]
gi|268315324|gb|ACZ01698.1| DNA-cytosine methyltransferase [Streptobacillus moniliformis DSM
12112]
Length = 438
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 129/348 (37%), Gaps = 69/348 (19%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQP++ G + +D R F +I ++ + K P+ +ENV G D + K +E +
Sbjct: 92 PCQPFSSAGNRLGFNDTRGTLFFEIERILKN--KKPYGFLLENVEGLINHD-NGKTLETI 148
Query: 72 ANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL-----------SFR------C 110
NS Y +L ++FG+ SR R + + + L SFR C
Sbjct: 149 LNSLNSLGYKVNYKVLDSIEFGLAQSRKRIYIVGTKDKLISLENFDKKYSSFRDIQEKNC 208
Query: 111 QLLNNQLLR------SPSPLLGNDDMTVITKHDQPDD--SWDKLL--ESCDPVERFLEFS 160
+ LN R +P L G ++ K D+ SWD L E D + L
Sbjct: 209 ETLNTDFTRKLLLNYNPCDLYGK---SIKDKRGGSDNIHSWDIGLKGEVTDKQKELL--- 262
Query: 161 NSGDQVNTETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMD---- 216
G + + +D T++ I F SL E +
Sbjct: 263 --GALLKERRKKVWAAEIGIDWMDGMPLTLK-----QISTFFNDKSLKEMLNDLVQKKYL 315
Query: 217 -IVYPD----SKRCCCFTKSY-YRYVKGTGS-----------LLATVQPKNKGKASSLKE 259
+ YP +KR TK Y V G S + T+ + K +
Sbjct: 316 VLEYPKKLVGNKREYDITKEKGYNIVTGKLSFEFSKILNPDGVAPTLVATDVEKLGVIDN 375
Query: 260 QHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPL 307
+ +R T RE L FP D+ L R+ LLGN++ I V+ +
Sbjct: 376 KGIRKLTIREGLRLFGFPEDYSL-DFLKYRESLDLLGNTVCIPVIKSI 422
>gi|23428398|gb|AAL15430.1| DNA methyltransferase A [Moraxella nonliquefaciens]
Length = 351
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 6/107 (5%)
Query: 6 AWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHA 65
A L PPCQ ++ +G + +D+R F F + LE++ P + +ENV
Sbjct: 72 AVLGGPPCQGFSLKGKKLGMNDSRNFLFQEYLEIVRQV--NPDFIVMENVKALTNKTNEY 129
Query: 66 KMIEILA---NSDYLTQEFILSPLQFGVPYSRPRYFCLA-KRKPLSF 108
+ +IL + Y +L+ +GVP SR R F +A K +P F
Sbjct: 130 FLTQILTGLKSMGYFVNYQVLNAKDYGVPQSRERIFIIATKNQPFDF 176
>gi|255279955|ref|ZP_05344510.1| modification methylase EcoRII [Bryantella formatexigens DSM 14469]
gi|255269728|gb|EET62933.1| DNA (cytosine-5-)-methyltransferase [Marvinbryantia formatexigens
DSM 14469]
Length = 311
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 48/102 (47%), Gaps = 9/102 (8%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVK---PPHMLFVENVVGFETSDTHAKMI 68
PCQP++ G QK D R F +I E+I +K P + +ENV +T D
Sbjct: 70 PCQPFSMMGQQKGFEDTRGTLFFRIAEIIADKIKKGRKPAAIVLENVRTLKTHDKGNTFR 129
Query: 69 EILAN-SDYLTQEF---ILSPLQFGVPYSRPRYF--CLAKRK 104
EI D L E IL+ FGVP +R R + C + +K
Sbjct: 130 EIRRILQDELGYEVFCDILNSADFGVPQTRNRTYLVCFSNQK 171
>gi|431797343|ref|YP_007224247.1| DNA-methyltransferase Dcm [Echinicola vietnamensis DSM 17526]
gi|430788108|gb|AGA78237.1| DNA-methyltransferase Dcm [Echinicola vietnamensis DSM 17526]
Length = 452
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Query: 12 PCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGFET---SDTHAKM 67
PCQP+++ G QK D R S F KI+E++ + P +ENV E +T A +
Sbjct: 77 PCQPFSKAGSQKGLEDERNGSLFDKIVEILDY--HKPKYFILENVRNLENHKKGETWAYI 134
Query: 68 IEILANS-DYLTQEFILSPLQFGVPYSRPRYFCLA 101
L N +Y + + SP FG+P R R+F +
Sbjct: 135 QNRLENELNYSIDKHVFSPHHFGIPQHRERFFIVG 169
>gi|428299006|ref|YP_007137312.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 6303]
gi|428235550|gb|AFZ01340.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 6303]
Length = 438
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 119/316 (37%), Gaps = 55/316 (17%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIE 69
PPCQ ++ G QK D R LK + L+ P M +ENV E K
Sbjct: 87 GPPCQGFSVAGKQKLDDD-RNQLVLKFINLVIEL--NPSMFVMENVPAIEWK----KFAG 139
Query: 70 ILANS------DYLTQEFILSPLQFGVPYSRPRYFCLAKR-----KPLSFRCQLLNNQLL 118
I N+ Y+ +++L+ +GVP R R + + PL ++ +
Sbjct: 140 ITGNAIALIEEQYILSKWLLTASDYGVPQKRQRAIWIGSKFGEVIPPLESDKKVTVGDAI 199
Query: 119 RSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTA 178
D++ I + Q D +W+ L E E++ D++ T T
Sbjct: 200 S---------DLSYIPINSQTD-TWE-LGEKG-------EYAEYLDKIFTSTLRRRLRAG 241
Query: 179 AVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSY-YRYVK 237
+ D +++++ + H +A Y D+K + ++ YR V
Sbjct: 242 RLSDHPCVSKSLDISGFQATVH-----------TAATQQKYTDTKPGEKESTTWAYRLVS 290
Query: 238 GTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGN 297
S N+ A + +H R T RE A LHSFP F F S + +GN
Sbjct: 291 DGFSPTLRAGSGNRTAARPIHYEHARVITVREAARLHSFPDWFDF--GTSKLAAHKAIGN 348
Query: 298 SLSIAVVAPLLQYLFA 313
S V PLL Y A
Sbjct: 349 S-----VPPLLAYAIA 359
>gi|305665822|ref|YP_003862109.1| DNA (cytosine-5-)-methyltransferase [Maribacter sp. HTCC2170]
gi|88710593|gb|EAR02825.1| DNA (cytosine-5-)-methyltransferase [Maribacter sp. HTCC2170]
Length = 408
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 134/337 (39%), Gaps = 49/337 (14%)
Query: 12 PCQPYTRQGLQKQSSD---ARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDT----- 63
PCQ Y+ + S + + I +++ PP LF+ENV S +
Sbjct: 80 PCQDYSVATTLQNSRGLIGKKGVLWWSIHKILSEKKNPPKYLFLENVDRLLKSPSTQRGR 139
Query: 64 -HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPS 122
A M++ L Y + +++ +G+P R R F +A K + + +L ++ S
Sbjct: 140 DFAIMLKSLGELGYAVEWRVINAADYGMPQRRRRIFFIAYHKSTA-----IYKKLKKADS 194
Query: 123 PLLGNDDMTV---------ITKHDQ--PDDSWDKLLESCDPVERFLEFSNSGDQVNTETG 171
ND T+ + H + + + ++ E+ + E+ F+NSG V+ G
Sbjct: 195 SQWLNDIGTISEAFPVHHILENHKRFSIEGNLVEISETFNQGEKLSPFANSGVFVD---G 251
Query: 172 FLSTGTAAVDDFGAAEETVEVDRCVSID-HFLVPLSLIERWGSAMDIVYPDSKRCCCFTK 230
T A + G +V + + F +P + +W SK+ K
Sbjct: 252 RAHTAKAFANYEGGKTVLNDVLQNGEVTPEFFIPAEDVPKWE-----YLKGSKKEVRTAK 306
Query: 231 SYYRYVKGTGSLL---------ATVQPKNKGKASSL------KEQHLRYFTPREVANLHS 275
+ ++Y G+++ T+ GK+ S + LR TP E+ L+
Sbjct: 307 TGFQYNYSEGAMVFPDALDNASRTIITGEGGKSPSRFKHVVQSSKGLRRLTPVELERLNM 366
Query: 276 FPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 312
FP D ++ +R +GN+L + VV + + LF
Sbjct: 367 FPDDHTKLEGVTDAKRAFFMGNALVVGVVEKIGKKLF 403
>gi|420398545|ref|ZP_14897758.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1962]
gi|393015219|gb|EJB16390.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1962]
Length = 352
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 9/101 (8%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L++L+L+ P M ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLVK-----PKMFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
++ DY+ + IL+ L +GVP R R + K
Sbjct: 126 FKQICNAFKERDYILEHAILNALDYGVPQIRERVILVGALK 166
>gi|308185227|ref|YP_003929360.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori SJM180]
gi|308061147|gb|ADO03043.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori SJM180]
Length = 317
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIP-HTVKPPHMLFVENVVGFETSDTHAKMIEI 70
PCQP++ G + D R F I E+I H K + V+N++ ++ +++
Sbjct: 69 PCQPFSTLGSLQGFEDKRGTLFFTICEIIKKHRPKIVVLENVKNLINHNKGESFKRILFE 128
Query: 71 LANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
L DY IL+ L FG+P R R F +A RK
Sbjct: 129 LNELDYQVNYDILNTLDFGIPQQRNRVFIVALRK 162
>gi|428770450|ref|YP_007162240.1| DNA-cytosine methyltransferase [Cyanobacterium aponinum PCC 10605]
gi|428684729|gb|AFZ54196.1| DNA-cytosine methyltransferase [Cyanobacterium aponinum PCC 10605]
Length = 350
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 5/120 (4%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEI- 70
PCQP++ G +K +D R F +I ++I + P ++ +ENV F+ D +I +
Sbjct: 71 PCQPFSIAGEKKGFNDIRGTLFFEIAKIIEY--HQPKVIVLENVKHFKNHDNGKTLITVL 128
Query: 71 --LANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGND 128
L N Y T +L+ FGVP +R R + + + F L + + +L N+
Sbjct: 129 NTLNNLGYTTSWTLLNAKDFGVPQNRERTIIIGCLEQIQFDFDKLETKPQKKLKDILENE 188
>gi|423246650|ref|ZP_17227703.1| DNA (cytosine-5-)-methyltransferase [Bacteroides dorei CL02T12C06]
gi|392635002|gb|EIY28909.1| DNA (cytosine-5-)-methyltransferase [Bacteroides dorei CL02T12C06]
Length = 248
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 12 PCQPYTRQGLQKQSSDA--RAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHA--KM 67
PCQP+++ G Q+ D R F KI E++ K P +F+ENV ++ D K+
Sbjct: 73 PCQPFSQAGKQQGFDDQKRRGNLFYKIWEIL--ECKKPEFVFLENVPNLKSHDNKNTYKV 130
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
I + Y Q+ I+SP FG+P R R + + + K
Sbjct: 131 IYSTLSQLYDIQDDIISPHYFGIPQHRTRIYIVGRLK 167
>gi|420489566|ref|ZP_14988158.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-11]
gi|420523507|ref|ZP_15021925.1| modification methylase HpaII [Helicobacter pylori Hp P-11b]
gi|393104987|gb|EJC05538.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-11]
gi|393125856|gb|EJC26308.1| modification methylase HpaII [Helicobacter pylori Hp P-11b]
Length = 317
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIP-HTVKPPHMLFVENVVGFETSDTHAKMIEI 70
PCQP++ G + D R F I E+I H K + V+N++ ++ +++
Sbjct: 69 PCQPFSTLGSLQGFEDKRGTLFFTICEIIKKHRPKIVVLENVKNLINHNKGESFKRILFE 128
Query: 71 LANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
L DY IL+ L FG+P R R F +A RK
Sbjct: 129 LNELDYQVNYDILNTLDFGIPQQRNRVFIVALRK 162
>gi|317480905|ref|ZP_07939986.1| C-5 cytosine-specific DNA methylase [Bacteroides sp. 4_1_36]
gi|316902990|gb|EFV24863.1| C-5 cytosine-specific DNA methylase [Bacteroides sp. 4_1_36]
Length = 441
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 12 PCQPYTRQGLQKQSSDA-RAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKM 67
PCQP+++ G QK D R F KI +++ K P +F+ENV ++ D T+ +
Sbjct: 73 PCQPFSQAGKQKGFGDENRGNLFYKIWDIL--QCKKPEFVFLENVPNLKSHDEGNTYRVI 130
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
E L+ Y Q+ I+SP FG+P R R + + + K
Sbjct: 131 HETLSRL-YDIQDDIISPHYFGIPQHRTRIYIVGRLK 166
>gi|313674544|ref|YP_004052540.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126]
gi|312941242|gb|ADR20432.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126]
Length = 420
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQ ++ G + D R F + E+I K P +F+ENV G D T A ++
Sbjct: 168 PCQAFSIAGRRGGFEDTRGTLFFDVAEIIRR--KKPKAIFLENVKGLRGHDKGKTLATIL 225
Query: 69 EILAN--SDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRC 110
+L N Y+ + I++ +GVP R R F + RK L
Sbjct: 226 NVLRNELGYYVPEPEIINAKDYGVPQKRERIFIVGFRKDLKIET 269
>gi|348590515|ref|YP_004874977.1| DNA-cytosine methyltransferase [Taylorella asinigenitalis MCE3]
gi|347974419|gb|AEP36954.1| DNA-cytosine methyltransferase [Taylorella asinigenitalis MCE3]
gi|399116677|emb|CCG19485.1| cytosine-specific methyltransferase [Taylorella asinigenitalis
14/45]
Length = 333
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 6/110 (5%)
Query: 4 AHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFE 59
AH +LL+ PCQ ++ G + DAR F + +I P ++F ENV V +
Sbjct: 66 AHDFLLAGFPCQAFSAAGRKMGFDDARGTLFFDVARIIK--FHKPKVVFAENVKNLVNHD 123
Query: 60 TSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 109
T ++ +L Y +L+ FGVP +R R + +A R+ L R
Sbjct: 124 KGTTFKIILNVLKELGYEVFFQVLNSKNFGVPQNRERIYIVAFRENLGIR 173
>gi|317473510|ref|ZP_07932802.1| C-5 cytosine-specific DNA methylase [Anaerostipes sp. 3_2_56FAA]
gi|316899021|gb|EFV21043.1| C-5 cytosine-specific DNA methylase [Anaerostipes sp. 3_2_56FAA]
Length = 385
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Query: 11 PPCQPYTRQGLQKQSSDAR-AFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIE 69
PPCQ ++ G + +SS A S+ KI+E I P +ENV + S K
Sbjct: 73 PPCQDFSHAGKRVESSRASLTESYAKIIENIK-----PQYFVMENVDRAQKSKAFEKAEN 127
Query: 70 ILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
I N+ Y + +L + GVP R R+FC+
Sbjct: 128 IFKNAGYGLTKIVLDASKCGVPQKRKRFFCIG 159
>gi|423232099|ref|ZP_17218501.1| DNA (cytosine-5-)-methyltransferase [Bacteroides dorei CL02T00C15]
gi|392625163|gb|EIY19234.1| DNA (cytosine-5-)-methyltransferase [Bacteroides dorei CL02T00C15]
Length = 248
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 12 PCQPYTRQGLQKQSSDA--RAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHA--KM 67
PCQP+++ G Q+ D R F KI E++ K P +F+ENV ++ D K+
Sbjct: 73 PCQPFSQAGKQQGFDDQKRRGNLFYKIWEIL--ECKKPEFVFLENVPNLKSHDNKNTYKV 130
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
I + Y Q+ I+SP FG+P R R + + + K
Sbjct: 131 IYSTLSQLYDIQDDIISPHYFGIPQHRTRIYIVGRLK 167
>gi|282899236|ref|ZP_06307209.1| C-5 cytosine-specific DNA methylase [Cylindrospermopsis raciborskii
CS-505]
gi|281195872|gb|EFA70796.1| C-5 cytosine-specific DNA methylase [Cylindrospermopsis raciborskii
CS-505]
Length = 422
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQP++ G Q+ D R F +I L+ T P +ENV G T D H + +
Sbjct: 74 PCQPFSYAGKQQGFGDTRGTLFFEIERLL--TSYQPEAFLLENVRGLTTHD-HGRTFNTI 130
Query: 72 ANS----DYLTQEFILSPLQFGVPYSRPRYFCLA 101
NS Y +L+ FGVP +R R + L
Sbjct: 131 INSLEKLGYGIHYLLLNSSNFGVPQNRVRIYILG 164
>gi|218441855|ref|YP_002380184.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7424]
gi|218174583|gb|ACK73316.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7424]
Length = 342
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 10 SPPCQPYTRQGLQKQSSDAR-AFS-FLKILELIPHTVKPPHMLFVENVVG--FETSDTHA 65
SPPCQP++ G QK +D R F FL +E P + +ENV G +
Sbjct: 95 SPPCQPFSVSGKQKGLADIRDGFPIFLSAVERYK-----PELWIIENVRGLFYRNKWYLE 149
Query: 66 KMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNN 115
++I N DYL + +L+ + P +R R F + R +F C+L N+
Sbjct: 150 EIITQFRNLDYLVEVKLLNASWYETPQNRERVFIIGHRGKFTFPCRLSNS 199
>gi|116748761|ref|YP_845448.1| DNA-cytosine methyltransferase [Syntrophobacter fumaroxidans MPOB]
gi|116697825|gb|ABK17013.1| DNA-cytosine methyltransferase [Syntrophobacter fumaroxidans MPOB]
Length = 429
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 74/178 (41%), Gaps = 30/178 (16%)
Query: 10 SPPCQPYT--------RQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
PPCQP++ RQGL+ D RA L+++ V P ++ +ENV G +
Sbjct: 100 GPPCQPFSKSAYWTGGRQGLR----DPRASGLRAYLDVV--EVALPKVILLENVRGLAPN 153
Query: 62 DTHAKMIEILAN----------SDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQ 111
+++LA+ S Y Q F L+ + +GVP SR R F LA +F+
Sbjct: 154 GNRDGGLKLLADGIRDINRRLGSAYKLQVFHLNAVNYGVPQSRERVFLLASIDGTTFQIP 213
Query: 112 LLNNQLLRSPSP------LLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSG 163
+ + P +G+ D +P W LL+S + +L + G
Sbjct: 214 PVTHGCGDRLEPRVTAWDAIGDLDSPEWPSELEPAGKWAGLLKSIPEGKNYLWHTKRG 271
>gi|384887473|ref|YP_005761984.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori 52]
gi|261839303|gb|ACX99068.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori 52]
Length = 348
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 118/312 (37%), Gaps = 45/312 (14%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L++L+L+ P M ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKMFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSP 123
++ Y+ + IL+ L +GVP R R + K SF+ Q P P
Sbjct: 126 FKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALK--SFK------QKFHFPKP 177
Query: 124 LLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDF 183
I H D+ L P++ +GD + G+L +F
Sbjct: 178 ---------IKTHFSLKDA----LGDLPPIQS----GENGDAL----GYLKNADNVFLEF 216
Query: 184 GAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLL 243
+ + + L+ + + G + D + + + +T +Y + +
Sbjct: 217 VRNSKELSEHSSPKNNEKLIKIMQTLKDGQSKDDLPKNLRPKSGYTNTYAKMWWEKPAPT 276
Query: 244 ATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAV 303
T + + + R + RE A L SFP +++F + S + +GN+
Sbjct: 277 ITRNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKF--YGSSSAKRLQIGNA----- 329
Query: 304 VAPLLQYLFAQA 315
V PLL AQA
Sbjct: 330 VPPLLSVALAQA 341
>gi|220929948|ref|YP_002506857.1| DNA-cytosine methyltransferase [Clostridium cellulolyticum H10]
gi|220000276|gb|ACL76877.1| DNA-cytosine methyltransferase [Clostridium cellulolyticum H10]
Length = 338
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 50/99 (50%), Gaps = 5/99 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G Q+ D+R F + ++ K P ++F+ENV F + D + +
Sbjct: 80 PCQAFSISGKQRGFEDSRGTLFFDVARIV--KAKKPKIVFMENVKNFVSHDDGKTLCIVK 137
Query: 72 ANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRKPLS 107
A + L +F +L+ + +G+P +R R + + R L+
Sbjct: 138 ATMEELGYKFNQKVLNAVNYGIPQNRERIYMVCFRNDLN 176
>gi|425450148|ref|ZP_18829980.1| Modification methylase NgoBI [Microcystis aeruginosa PCC 7941]
gi|389769132|emb|CCI05932.1| Modification methylase NgoBI [Microcystis aeruginosa PCC 7941]
Length = 331
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 55/132 (41%), Gaps = 15/132 (11%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV---GFETSDTHAKMI 68
PCQP++ G K D R F +I ++ K P +ENV G + T ++
Sbjct: 84 PCQPFSICGNLKGFEDTRGTLFFEIARILK--AKQPAAFILENVKQLQGHQQGKTLQVIL 141
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGND 128
+ L + DY +L+ L FG+P R R F + R+ F P P L
Sbjct: 142 DTLQDLDYYIDYRVLNALNFGLPQKRERIFIVGFREARGFIW----------PKPALSRQ 191
Query: 129 DMTVITKHDQPD 140
+T I + + D
Sbjct: 192 SLTEILEENVSD 203
>gi|420477123|ref|ZP_14975783.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-23]
gi|393093971|gb|EJB94584.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-23]
Length = 352
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 9/101 (8%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L+IL+L+ P + ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRILDLVK-----PKIFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
++ DY+ + IL+ L +GVP R R + K
Sbjct: 126 FQRICNAFKERDYILEHAILNALDYGVPQIRERVILVGALK 166
>gi|420417787|ref|ZP_14916882.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4044]
gi|393030968|gb|EJB32041.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4044]
Length = 317
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIP-HTVKPPHMLFVENVVGFETSDTHAKMIEI 70
PCQP++ G + D R F I E+I H K + V+N++ ++ +++
Sbjct: 69 PCQPFSTLGSLQGFEDKRGTLFFTICEIIKKHRPKIVVLENVKNLINHNKRESFKRILFE 128
Query: 71 LANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
L DY IL+ L FG+P R R F +A RK
Sbjct: 129 LNELDYQVNYDILNTLDFGIPQQRNRVFIVALRK 162
>gi|319893523|ref|YP_004150398.1| DNA-cytosine methyltransferase [Staphylococcus pseudintermedius
HKU10-03]
gi|317163219|gb|ADV06762.1| DNA-cytosine methyltransferase [Staphylococcus pseudintermedius
HKU10-03]
Length = 394
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQ +++ GL++ D R F I +I K P +ENV ++ D T++ +
Sbjct: 155 PCQAFSQAGLKRGFEDTRGTLFFDIARIIKE--KRPKAFLLENVKNLKSHDKGKTYSTIE 212
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLA--KRKPLSFR 109
+ L + DY +L FGVP +R R + + KR+ +R
Sbjct: 213 KTLIDLDYAVYPLLLKAKDFGVPQNRERIYIVGFDKRRIKKWR 255
>gi|427738987|ref|YP_007058531.1| DNA-methyltransferase Dcm [Rivularia sp. PCC 7116]
gi|427374028|gb|AFY57984.1| DNA-methyltransferase Dcm [Rivularia sp. PCC 7116]
Length = 429
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 131/324 (40%), Gaps = 51/324 (15%)
Query: 12 PCQPYTRQGLQKQSSDAR---AFSFLK-ILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
PCQ ++ G ++ D R F FL+ ILEL +P + +F ENV G + +
Sbjct: 81 PCQGFSMMG-KRALDDPRNSLVFHFLRLILEL-----QPKYFVF-ENVPGLTVGEHRIFL 133
Query: 68 IEILA----NSDYLTQEF-ILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPS 122
++A N + + +L+ +GVP R R F R+ L+ L + P
Sbjct: 134 STVIAEFEKNGYRVEANYQVLNAANYGVPQDRARLFIFGCRQGLN---------LPKYPQ 184
Query: 123 PL----LGNDDMTVITKHDQPDDS--WDKLLESCD--PVERFLEFSNSGDQVNTETGFLS 174
PL + ++ D P WD + CD VE + E D V + G S
Sbjct: 185 PLTAPKISKKSKYIVNNPDLPATPTVWDAI---CDLPEVENYSELIER-DWVIAKYGEPS 240
Query: 175 TGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYR 234
++ + + E+ +R D+F + S + + ++ S++
Sbjct: 241 NYSSQLRGISSIEKNYSYERL--FDNFFLTCSTRTKHNLQSISRFKQTEPGKTEPVSHFH 298
Query: 235 YVKGTG--SLLATVQPKNKGKASSLKEQHL---RYFTPREVANLHSFPGDFQFPHHLSLR 289
+ G L P+N+G +S + H R T RE A LHS+P F+F HL+
Sbjct: 299 KLAANGISKTLRAGTPRNRGAFTSPRPIHPVTPRCITVREAARLHSYPDWFRF--HLTKW 356
Query: 290 QRYALLGNSLSIAVVAPLLQYLFA 313
+ +GNS V PLL A
Sbjct: 357 HGFRQIGNS-----VPPLLAKAIA 375
>gi|294949213|ref|XP_002786099.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239900227|gb|EER17895.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 125
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 25/36 (69%)
Query: 4 AHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILEL 39
A W LSPPCQPYTRQG Q+ S D RA + +I ++
Sbjct: 73 ADMWTLSPPCQPYTRQGKQQDSEDCRATALGRITQV 108
>gi|34451616|gb|AAQ72364.1| methylase fusion protein [Geobacillus stearothermophilus]
Length = 1007
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 4/101 (3%)
Query: 11 PPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLF--VENVVGFETSDTHAKMI 68
PPCQ ++ GL + + D R F + +E++ VKP ++F VE ++ F++ + ++
Sbjct: 849 PPCQGFSMAGL-RLTDDPRNQLFKEFIEIVSR-VKPKVIVFENVEGILSFQSGKVYRAIL 906
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 109
E+ + Y T+ L + VP R R F + R + +
Sbjct: 907 EMFSEIGYFTEGRTLMSSDYAVPQKRKRVFIICTRDDMDVK 947
>gi|420461842|ref|ZP_14960629.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-3]
gi|393080005|gb|EJB80734.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-3]
Length = 325
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 9/101 (8%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L+IL+L+ P + ENVVG +
Sbjct: 44 LGGPPCQSYSTLGKRKMDEKANLFKEYLRILDLVK-----PKIFVFENVVGLMSMQKGQL 98
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
++ DY+ + IL+ L +GVP R R + K
Sbjct: 99 FQRICNAFKERDYILEHAILNALDYGVPQIRERVILVGALK 139
>gi|406659161|ref|ZP_11067299.1| modification methylase SsoII [Streptococcus iniae 9117]
gi|405577270|gb|EKB51418.1| modification methylase SsoII [Streptococcus iniae 9117]
Length = 406
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQ ++ G +K D R F ++L +I VK P +F+ENV VG + +T +
Sbjct: 86 PCQAFSIAGYRKGFEDERGDLFFELLRMIK--VKKPRAIFIENVKNMVGHDHGNTFKVIR 143
Query: 69 EILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 101
E L ++Y + +L+ +G +P +R R + +
Sbjct: 144 EALTENNYFIKWKVLNGKDYGNIPQNRERIYIVG 177
>gi|420437308|ref|ZP_14936292.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-28]
gi|393053622|gb|EJB54566.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-28]
Length = 348
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L++L+L+ P + ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
++ Y+ + IL+ L +GVP +R R F + K
Sbjct: 126 FKQICNAFKERGYILEHAILNALDYGVPQTRERVFLVGALK 166
>gi|420406668|ref|ZP_14905838.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6311]
gi|393023505|gb|EJB24619.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6311]
Length = 351
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L++L+L+ P M ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKMFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
++ Y+ + IL+ L +GVP R R F +
Sbjct: 126 FKQICNAFKERGYILEHAILNALDYGVPQIRERVFLVG 163
>gi|397635655|gb|EJK71953.1| hypothetical protein THAOC_06560, partial [Thalassiosira oceanica]
Length = 170
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 37/113 (32%)
Query: 215 MDIVYPDSKRCCCFTKSYYRYVKGTGSLLAT---------------------VQPKNKGK 253
DIV P+ +R CFT SY ++++GTGS+L T PK++
Sbjct: 6 FDIVTPEQRRSSCFTHSYGKFIRGTGSILYTGPVAANDCEGDALPRAELFELADPKDRAY 65
Query: 254 ASSLK-----EQHLRYFTPREVANLHSFPGD-----------FQFPHHLSLRQ 290
S E+ +RY + E+A L FP D F+FP +++Q
Sbjct: 66 DESWSKRINWEEDMRYLSGTEIARLFGFPVDCASDGPTAMRSFEFPSTCTMKQ 118
>gi|317497297|ref|ZP_07955620.1| DNA-cytosine methyltransferase [Lachnospiraceae bacterium
5_1_63FAA]
gi|316895366|gb|EFV17525.1| DNA-cytosine methyltransferase [Lachnospiraceae bacterium
5_1_63FAA]
Length = 385
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 7/102 (6%)
Query: 5 HAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFET 60
H LL+ PCQP+++ GL K DAR F + +I K P +ENV G +
Sbjct: 132 HDILLAGFPCQPFSQAGLHKGFEDARGTLFFDVARII--RAKRPKAFMLENVKQLKGHDK 189
Query: 61 SDTHAKMIEILANSDYLTQE-FILSPLQFGVPYSRPRYFCLA 101
+T ++ IL DY + IL+ FG+P +R R +
Sbjct: 190 GNTIKVILSILNELDYYVPDPQILNAYHFGIPQNRERIIIVG 231
>gi|420404923|ref|ZP_14904103.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6271]
gi|393024793|gb|EJB25903.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6271]
Length = 351
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L++L+L+ P M ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKMFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
++ Y+ + IL+ L +GVP R R F +
Sbjct: 126 FKQICNAFKERGYILEHAILNALDYGVPQIRERVFLVG 163
>gi|420402021|ref|ZP_14901212.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6081]
gi|393017840|gb|EJB18992.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6081]
Length = 188
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 9/101 (8%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L++L+L+ P M ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKMFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
++ Y+ + IL+ L +GVP R R F + K
Sbjct: 126 FKQICNAFKERGYILEHAILNALDYGVPQIRERVFLVGVLK 166
>gi|440682814|ref|YP_007157609.1| DNA-cytosine methyltransferase [Anabaena cylindrica PCC 7122]
gi|428679933|gb|AFZ58699.1| DNA-cytosine methyltransferase [Anabaena cylindrica PCC 7122]
Length = 390
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 66/142 (46%), Gaps = 17/142 (11%)
Query: 12 PCQPYTRQGLQKQSSDA-RAFSFLKILELIPHTVKPPHMLFVENVVGFETSDT--HAKMI 68
PCQP++ G + D+ R F +I+E+I K P +ENV T + H ++I
Sbjct: 76 PCQPFSPAGKKLGVRDSVRGSLFERIVEIINE--KQPKHFLLENVKRLLTMENGYHFRVI 133
Query: 69 -EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGN 127
L+ DY + I+SP+ FG+P +R R F + F + +++L S L
Sbjct: 134 LNALSELDYFIEWRIISPISFGIPQNRDRIFIFGTK----FNSTDITSEVLEKTSIFLTQ 189
Query: 128 DDM-------TVITKHDQPDDS 142
D+ +I K+ P D+
Sbjct: 190 PDLIDLENIEILIEKNMMPIDA 211
>gi|312281368|ref|YP_004022731.1| DNA-cytosine methyltransferase [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312181897|gb|ADQ42066.1| DNA-cytosine methyltransferase [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 319
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQP++ G Q+ +D R F +I+ ++ K P ++F+ENV V T ++
Sbjct: 74 PCQPFSIAGYQRGLNDPRGRLFYEIVRIVHD--KKPKIIFLENVKNLVSHNNGITFKNIL 131
Query: 69 EILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 101
L N Y + +L+ L++G VP +R R + +
Sbjct: 132 NALENEGYYLKYAVLNSLEYGNVPQNRERVYIVG 165
>gi|420497419|ref|ZP_14995979.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-25]
gi|420527743|ref|ZP_15026137.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-25c]
gi|420530274|ref|ZP_15028658.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-25d]
gi|393113698|gb|EJC14216.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-25]
gi|393134869|gb|EJC35278.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-25c]
gi|393135477|gb|EJC35873.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-25d]
Length = 160
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGFETSDTHAK 66
L PPCQ Y+ G +K A F +L+IL+L+ P + ENVVG S +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRILDLV-----KPKIFVFENVVGL-ISMQKGQ 124
Query: 67 MIEILANS----DYLTQEFILSPLQFGVPYSRPRYF 98
+ + + N+ Y+ + IL+ L +GVP R R F
Sbjct: 125 LFQRICNAFKERGYILEHAILNALDYGVPQVRERVF 160
>gi|49476998|ref|YP_035184.1| modification methylase HpaII (cytosine-specific methyltransferase
HpaII) [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|49328554|gb|AAT59200.1| modification methylase HpaII (Cytosine-specific methyltransferase
HpaII) [Bacillus thuringiensis serovar konkukian str.
97-27]
Length = 373
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 117/326 (35%), Gaps = 71/326 (21%)
Query: 12 PCQPYTRQGLQKQSSD-ARAFSFLKILELIPHTVKPPHMLFVENVVGF---ETSDTHAKM 67
PCQ ++ G ++ D R F + ++I T P +ENV G + +T +
Sbjct: 75 PCQAFSTAGKKEGFRDKTRGTLFFDVADIIERT--RPKAFLLENVEGLIRHKKGETFKTI 132
Query: 68 IEILA--------------NSD--YLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQ 111
+E L N + Y + F+L+ FGVP +RPR + +
Sbjct: 133 LETLVIELDYKVIGVEKGENGELIYDPRSFLLNSRNFGVPQNRPRIYIVG---------- 182
Query: 112 LLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETG 171
N +L R D + + P K + D V LE N G++ G
Sbjct: 183 -FNQRLYR--------DKIESMPLFTLPKSRSRKKI--YDSVRDVLE-DNVGEKYYLSEG 230
Query: 172 FLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKS 231
+L T + G + + +V L IE S + S +
Sbjct: 231 YLETLKKHKEAQGK--------KGNGFGYSIVNLPEIENPVSNALLATGGSGKERNLIYD 282
Query: 232 YYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPG----------DFQ 281
Y + G L+ K K S L + +R TP E L F G F
Sbjct: 283 YNPDI--VGKLV-------KSKKSPLNSEGVRIMTPNEWGKLQGFVGYAFKSASGEDTFS 333
Query: 282 FPHHLSLRQRYALLGNSLSIAVVAPL 307
FP +S QRY GNS++I V+ +
Sbjct: 334 FPEKMSDAQRYKQFGNSVTIPVIEEI 359
>gi|422794573|ref|ZP_16847248.1| DNA-cytosine methyltransferase, partial [Escherichia coli TA007]
gi|323968854|gb|EGB64190.1| DNA-cytosine methyltransferase [Escherichia coli TA007]
Length = 272
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 10/116 (8%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PC +++ GL+K +D R F I +I K PH +ENV +G + T + +
Sbjct: 141 PCVAFSQAGLKKGFNDTRGTLFFDIARIIKE--KKPHAFLLENVKNLLGHDKGRTFSIIK 198
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPL 124
L +Y I + FGVP +R R + + K ++ N++ P+PL
Sbjct: 199 NTLEELNYTVYYNIFAAKDFGVPQNRERIYIVGFNKE-----KVRNHEHFTFPTPL 249
>gi|387782130|ref|YP_005792843.1| type II m5C methylase [Helicobacter pylori 51]
gi|261837889|gb|ACX97655.1| type II m5C methylase [Helicobacter pylori 51]
Length = 348
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 120/313 (38%), Gaps = 47/313 (15%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L++L+L+ P M ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKMFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSP 123
++ Y+ + IL+ L +GVP R R + K SF+ Q P P
Sbjct: 126 FKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGTLK--SFK------QKFHFPKP 177
Query: 124 LLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDF 183
I H D+ L P++ +GD + G+L +F
Sbjct: 178 ---------IKAHFSLKDA----LGDLPPIQS----GENGDAL----GYLKNADNVFLEF 216
Query: 184 GAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKR-CCCFTKSYYRYVKGTGSL 242
+ + + L+ + + G + D + P+S R +T +Y + +
Sbjct: 217 VRNSKELSEHSSPKNNEKLIKIMQTLKDGQSKDDL-PESLRPKSGYTNTYAKMWWEKPAP 275
Query: 243 LATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIA 302
T + + + R + RE A L SFP +++F + S + +GN+
Sbjct: 276 TITRNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKF--YGSSSAKRLQIGNA---- 329
Query: 303 VVAPLLQYLFAQA 315
V PLL AQA
Sbjct: 330 -VPPLLSVALAQA 341
>gi|210617281|ref|ZP_03291507.1| hypothetical protein CLONEX_03729 [Clostridium nexile DSM 1787]
gi|210149385|gb|EEA80394.1| hypothetical protein CLONEX_03729 [Clostridium nexile DSM 1787]
Length = 455
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 8/102 (7%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQ ++ G ++ +DAR F +I L+ K P+ +ENV G + D T ++
Sbjct: 104 PCQAFSIAGKREGFADARGTLFFEIARLLK--AKRPNYFILENVPGLLSHDKGRTFCTIL 161
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRC 110
L+ Y + +L+ FGVP +R R + + L FRC
Sbjct: 162 STLSQLGYHVEWKVLNSKDFGVPQARKRVYIVGY---LDFRC 200
>gi|395784978|ref|ZP_10464712.1| DNA (cytosine-5-)-methyltransferase [Bartonella tamiae Th239]
gi|395425490|gb|EJF91651.1| DNA (cytosine-5-)-methyltransferase [Bartonella tamiae Th239]
Length = 395
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 64/160 (40%), Gaps = 12/160 (7%)
Query: 11 PPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF---ETSDTHAKM 67
PPCQ ++ G ++ D R + L +I T P ENV GF +++ ++
Sbjct: 136 PPCQSWSEAGARRGIDDPRGKLIFEYLRVIKRT--KPIFFVAENVHGFIHSRNTESFKRI 193
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCL----AKRKPLSFRCQLLNNQLLRSPSP 123
I++ N Y +L +GVP R R F + A K F L N LR
Sbjct: 194 IKLFENEGYAVSWKLLKASDYGVPQDRNRVFIVGYHHALNKTFKFPEILRNKPTLRDAIG 253
Query: 124 LLGNDDMTVITK---HDQPDDSWDKLLESCDPVERFLEFS 160
L N + K H+ D + + S + V + E S
Sbjct: 254 DLANLKIGATKKVKNHELLDSGYSPIFMSRNRVRSWEEQS 293
>gi|420414314|ref|ZP_14913434.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4099]
gi|420419419|ref|ZP_14918509.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4076]
gi|393026648|gb|EJB27745.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4099]
gi|393031325|gb|EJB32397.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4076]
Length = 317
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQP++ G + D R F I E+I P ++ +ENV + ++ +++
Sbjct: 69 PCQPFSTLGSLQGFEDKRGTLFFTICEIIKKY--RPKIVVLENVKNLINHNKGESFKRIL 126
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
L DY IL+ L FG+P R R F +A RK
Sbjct: 127 FELNELDYQVNYDILNTLDFGIPQQRNRVFIVALRK 162
>gi|386586337|ref|YP_006082739.1| modification methylase HaeIII [Streptococcus suis D12]
gi|353738483|gb|AER19491.1| modification methylase HaeIII [Streptococcus suis D12]
gi|451939649|gb|AGF89780.1| C-5 cytosine-specific DNA methylase [Streptococcus phage phiD12]
Length = 355
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 13/109 (11%)
Query: 11 PPCQPYTRQGLQKQSSDARAF---SFLKILELIPHTVKPPHMLFVENVVGFETSDT---H 64
PPCQ Y+++G +K D R F F+K++EL+ P+ +ENV T++
Sbjct: 77 PPCQGYSQKGSRKTIHDERNFLFKYFVKVVELV-----SPNYFVMENVPNLLTAEKGFFK 131
Query: 65 AKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK--RKPLSFRCQ 111
++I + Y I+ +FGVP R R L K +K ++FR +
Sbjct: 132 QELITLFEELGYSLSMEIVDASKFGVPQRRRRAIILGKKGKKSVTFRLE 180
>gi|428299407|ref|YP_007137713.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 6303]
gi|428235951|gb|AFZ01741.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 6303]
Length = 458
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 113/321 (35%), Gaps = 63/321 (19%)
Query: 6 AWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHA 65
A + PPCQ ++ G QK D R+ LK + L+ P M +ENV E
Sbjct: 91 AVIGGPPCQGFSVAGKQKLDDD-RSQLVLKFINLVIEL--NPSMFVMENVPAIEWK---- 143
Query: 66 KMIEILANS------DYLTQEFILSPLQFGVPYSRPRYFCLAKR-----KPLSFRCQLLN 114
K I N+ Y+ +++L+ FGVP R R + R P +
Sbjct: 144 KFAGITGNAIALIEEHYILSKWLLTASDFGVPQKRQRAIWVGSRFGEVAAPTENEVRFSI 203
Query: 115 NQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLE--FSNSGDQVNTETGF 172
R S D++ + D D+W+ L ++L+ F N +G
Sbjct: 204 GDANRKVSVFDAIADLSHLPI-DSQTDTWE--LNQKGEYAQYLDKIFPELSKSSNLISGC 260
Query: 173 LSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSY 232
L+T A +++G + P K +
Sbjct: 261 LATAHTAATQ--------------------------KKYGDTV----PGEKEPTTWA--- 287
Query: 233 YRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRY 292
YR V S N+ A + +H R T RE A LHSFP F F S +
Sbjct: 288 YRLVSDGFSPTLRAGSGNRTAARPIHYEHARVITVREAARLHSFPDWFDF--GASKLAAH 345
Query: 293 ALLGNSLSIAVVAPLLQYLFA 313
+GNS V PLL Y A
Sbjct: 346 KAIGNS-----VPPLLAYAIA 361
>gi|300905017|ref|ZP_07122835.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 84-1]
gi|301305818|ref|ZP_07211903.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 124-1]
gi|415865124|ref|ZP_11538058.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 85-1]
gi|424757713|ref|ZP_18185448.1| putative DNA methylase [Escherichia coli O111:H11 str. CFSAN001630]
gi|300403166|gb|EFJ86704.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 84-1]
gi|300838908|gb|EFK66668.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 124-1]
gi|315254408|gb|EFU34376.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 85-1]
gi|421949161|gb|EKU06151.1| putative DNA methylase [Escherichia coli O111:H11 str. CFSAN001630]
Length = 354
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFE----TSDTHAKM 67
PCQPY++Q K++ D R + + H + P +FVENV G + T
Sbjct: 90 PCQPYSKQNSNKKNDDPRLDLLKEFSRFVEHYM--PDFIFVENVPGMQKFNKNEGTFMMF 147
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 103
+E+L++ Y ++ +GVP +R R +A +
Sbjct: 148 LEMLSSKGYSVDYKVMPAAWYGVPQTRERLVLIASK 183
>gi|268610192|ref|ZP_06143919.1| cytosine-specific DNA methylase [Ruminococcus flavefaciens FD-1]
Length = 475
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 10/113 (8%)
Query: 12 PCQPYTRQGLQKQSSD-ARAFSFLKILELIPHTVKPPHMLFV--ENVVGFETSDTHAKMI 68
PCQP+++ G QK D R F KI++++ P + F+ ENV + +I
Sbjct: 130 PCQPFSKAGAQKGFKDETRGNLFYKIMDILDGH---PEVKFIILENVRNLADKTENWDII 186
Query: 69 --EILANSDYLTQE-FILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLL 118
E+ + Y+T+ ILSP FG+P R R + L R+ + + Q+L N +
Sbjct: 187 TTELTKRNFYITETPIILSPSDFGIPQIRERVYILGIRRDIRNQ-QILTNGFI 238
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 258 KEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQA 315
+++H RY TPRE ANL SF F+F ++ +Y LGNS+++ ++ L + LF A
Sbjct: 410 QKEHFRYITPREAANLQSFHASFKFQGTDAI--KYRQLGNSVNVRILKILGESLFNLA 465
>gi|419881089|ref|ZP_14402439.1| putative DNA methylase [Escherichia coli O111:H11 str. CVM9545]
gi|421776835|ref|ZP_16213437.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli AD30]
gi|432850040|ref|ZP_20081021.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE144]
gi|388366340|gb|EIL30076.1| putative DNA methylase [Escherichia coli O111:H11 str. CVM9545]
gi|408458217|gb|EKJ82006.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli AD30]
gi|431400932|gb|ELG84290.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE144]
Length = 346
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFE----TSDTHAKM 67
PCQPY++Q K++ D R + + H + P +FVENV G + T
Sbjct: 82 PCQPYSKQNSNKKNDDPRLDLLKEFSRFVEHYM--PDFIFVENVPGMQKFNKNEGTFMMF 139
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 103
+E+L++ Y ++ +GVP +R R +A +
Sbjct: 140 LEMLSSKGYSVDYKVMPAAWYGVPQTRERLVLIASK 175
>gi|373119248|ref|ZP_09533354.1| DNA (cytosine-5-)-methyltransferase [Lachnospiraceae bacterium
7_1_58FAA]
gi|371664217|gb|EHO29395.1| DNA (cytosine-5-)-methyltransferase [Lachnospiraceae bacterium
7_1_58FAA]
Length = 385
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 57/134 (42%), Gaps = 15/134 (11%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQ ++ G +K DAR F +I L + P L +ENV G T D T + ++
Sbjct: 69 PCQAFSNAGRRKGFEDARGTLFFEIARLA--QARRPAYLLLENVPGLLTHDQGRTFSAIL 126
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGND 128
L + Y + +L+ F VP R R F + P RC ++L P+ G D
Sbjct: 127 ATLNDLGYRVEWMVLNSADFRVPQVRKRVFIVGYLDP---RCA---GKIL----PVFGTD 176
Query: 129 DMTVITKHDQPDDS 142
+I P S
Sbjct: 177 GKALIQVLGGPQGS 190
>gi|385226718|ref|YP_005786642.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori SNT49]
gi|344331631|gb|AEN16661.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori SNT49]
Length = 351
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 120/313 (38%), Gaps = 47/313 (15%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L++L+L+ P + ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSP 123
++ Y+ + IL+ L +GVP R R + K SF+ Q R P P
Sbjct: 126 FKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALK--SFK------QKFRFPKP 177
Query: 124 LLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDF 183
I H D+ L P++ +GD + G+L +F
Sbjct: 178 ---------IKTHFSLKDALGDL----PPIQS----GENGDAL----GYLKNADNVFLEF 216
Query: 184 GAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKR-CCCFTKSYYRYVKGTGSL 242
+ + + L+ + + G + D + P+S R +T +Y + +
Sbjct: 217 VRNSKELSEHSSPKNNEKLIKIMQTLKDGQSKDDL-PESLRPKSGYTNTYAKMWWEKPAP 275
Query: 243 LATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIA 302
T + + + R + RE A L SFP D++F S ++ +GN+
Sbjct: 276 TITRNFSTPSSSRCIHPRDSRALSIREGARLQSFPDDYKFCGSSSAKR--LQIGNA---- 329
Query: 303 VVAPLLQYLFAQA 315
V PLL A A
Sbjct: 330 -VPPLLSMALAHA 341
>gi|328947038|ref|YP_004364375.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489]
gi|328447362|gb|AEB13078.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489]
Length = 466
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 12 PCQPYTRQGLQKQSSDA--RAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIE 69
PCQP+++ G Q+ +D R F KI++++ K P + +ENV +T D
Sbjct: 96 PCQPFSKAGKQQGFNDEKDRGNLFWKIMDILKD--KTPEYILLENVQNLQTHDNGNTWEV 153
Query: 70 ILANSD--YLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
I N + Y + I+SP FG+P R R + + + K
Sbjct: 154 IRTNLEKLYDVKCDIISPHNFGIPQHRKRIYIVGRLK 190
>gi|365843420|ref|ZP_09384343.1| DNA (cytosine-5-)-methyltransferase [Flavonifractor plautii ATCC
29863]
gi|364571597|gb|EHM49177.1| DNA (cytosine-5-)-methyltransferase [Flavonifractor plautii ATCC
29863]
Length = 385
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 57/134 (42%), Gaps = 15/134 (11%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQ ++ G +K DAR F +I L + P L +ENV G T D T + ++
Sbjct: 69 PCQAFSNAGRRKGFEDARGTLFFEIARLA--QARRPAYLLLENVPGLLTHDQGRTFSAIL 126
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGND 128
L + Y + +L+ F VP R R F + P RC ++L P+ G D
Sbjct: 127 ATLNDLGYRVEWMVLNSADFRVPQVRKRVFIVGYLDP---RCA---GKIL----PVFGTD 176
Query: 129 DMTVITKHDQPDDS 142
+I P S
Sbjct: 177 GKALIQVLGGPQGS 190
>gi|422794570|ref|ZP_16847245.1| DNA-cytosine methyltransferase, partial [Escherichia coli TA007]
gi|323968851|gb|EGB64187.1| DNA-cytosine methyltransferase [Escherichia coli TA007]
Length = 282
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 10/116 (8%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PC +++ GL+K +D R F I +I K PH +ENV +G + T + +
Sbjct: 44 PCVAFSQAGLKKGFNDTRGTLFFDIARIIKE--KKPHAFLLENVKNLLGHDKGRTFSIIK 101
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPL 124
L +Y I + FGVP +R R + + K ++ N++ P+PL
Sbjct: 102 NTLEELNYTVYYNIFAAKDFGVPQNRERIYIVGFNKE-----KVRNHEHFTFPTPL 152
>gi|117620606|ref|YP_855619.1| modification methylase DdeI [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117562013|gb|ABK38961.1| modification methylase DdeI [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 440
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 31/166 (18%)
Query: 10 SPPCQPYTRQGLQKQSSDAR---AFSFLKILELIPHTVKPPHMLFVENVVGFET------ 60
PPCQ ++ G ++ D R A ++ ++ L+ P +L +ENV GF T
Sbjct: 97 GPPCQGFSLAG-KRDPDDPRNKLAEQYIDVVRLVK-----PKLLLLENVRGFNTKFTKGR 150
Query: 61 ---SDTHAKMI-EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK-------RKPL--- 106
S+ ++K++ E L Y +++ +GVP RPR+ +AK P
Sbjct: 151 GEGSEPYSKIVKEKLEELGYGVSYKVITSSDWGVPQRRPRFILIAKFGVPSDLFNPFEDI 210
Query: 107 -SFRCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCD 151
+FR LN + L S SP+ D + + D + KL+E+ D
Sbjct: 211 DAFRLNFLNMKGLNSNSPVSAKDAIYDLEIFDSKNKK-KKLIENTD 255
>gi|32470131|ref|NP_863573.1| DNA-methyltransferase MKpn2kI [Klebsiella pneumoniae]
gi|386622391|ref|YP_006147220.1| type II DNA-methyltransferase [Escherichia coli O7:K1 str. CE10]
gi|462656|sp|P34879.1|MTS2_SHISO RecName: Full=Modification methylase SsoII; Short=M.SsoII; AltName:
Full=Cytosine-specific methyltransferase SsoII
gi|11559818|gb|AAG38101.1|AF300473_2 DNA-methyltransferase MKpn2kI [Klebsiella pneumoniae]
gi|294244|gb|AAA98279.1| C5-cytosine methylase [Plasmid P4]
gi|349741575|gb|AEQ15936.1| type II DNA-methyltransferase [Escherichia coli O7:K1 str. CE10]
Length = 379
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 10/116 (8%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PC +++ GL+K +D R F I +I K PH +ENV +G + T + +
Sbjct: 141 PCVAFSQAGLKKGFNDTRGTLFFDIARIIKE--KKPHAFLLENVKNLLGHDKGRTFSIIK 198
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPL 124
L +Y I + FGVP +R R + + K ++ N++ P+PL
Sbjct: 199 NTLEELNYTVYYNIFAAKDFGVPQNRERIYIVGFNKE-----KVRNHEHFTFPTPL 249
>gi|428211804|ref|YP_007084948.1| DNA-methyltransferase Dcm [Oscillatoria acuminata PCC 6304]
gi|428000185|gb|AFY81028.1| DNA-methyltransferase Dcm [Oscillatoria acuminata PCC 6304]
Length = 390
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 14/133 (10%)
Query: 12 PCQPYTRQGLQKQSSDA-RAFSFLKILELIPHTVKPPHMLFVENVVGFETSDT--HAKMI 68
PCQP++ G ++ D R F +I+E++ K P F+ENV T ++ H ++I
Sbjct: 77 PCQPFSSAGKKQGIRDCLRGTLFERIIEILDK--KQPPYFFLENVKRMLTMESGYHFRVI 134
Query: 69 -EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR--KPLSFRCQLLNNQLLRSPSPLL 125
+ L+ DY + +++ L FG+P +R R F R P S+ +LL + S LL
Sbjct: 135 LDALSALDYFIEWRVINTLSFGLPQNRDRIFIFGTRINSPQSYL------ELLENHSVLL 188
Query: 126 GNDDMTVITKHDQ 138
D+ I Q
Sbjct: 189 TQADVEAIQVDSQ 201
>gi|1657420|gb|AAC45971.1| DNA cytosine methyltransferase M.SenPI [Salmonella enterica subsp.
enterica serovar Enteritidis]
Length = 379
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 10/116 (8%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PC +++ GL+K +D R F I +I K PH +ENV +G + T + +
Sbjct: 141 PCVAFSQAGLKKGFNDTRGTLFFDIARIIKE--KKPHAFLLENVKNLLGHDKGRTFSIIK 198
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPL 124
L +Y I + FGVP +R R + + K ++ N++ P+PL
Sbjct: 199 NTLEELNYTVYYNIFAAKDFGVPQNRERIYIVGFNKE-----KVRNHEHFTFPTPL 249
>gi|225019628|ref|ZP_03708820.1| hypothetical protein CLOSTMETH_03581 [Clostridium methylpentosum
DSM 5476]
gi|224947595|gb|EEG28804.1| hypothetical protein CLOSTMETH_03581 [Clostridium methylpentosum
DSM 5476]
Length = 390
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 5/116 (4%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIE 69
PPCQ ++ G + ++ A S I ++P + + +ENV + S+T+A
Sbjct: 73 GPPCQDFSHAGKRIEAGRA---SLTGAYAQIISEIRPRYFV-MENVDRAQKSNTYASARN 128
Query: 70 ILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK-RKPLSFRCQLLNNQLLRSPSPL 124
I + Y E IL GVP R R+FC+ + F + NNQ+ + + L
Sbjct: 129 IFVKAGYGLTEIILDASHCGVPQKRKRFFCIGSLGQKDGFLLEYFNNQVSKHETTL 184
>gi|1871451|dbj|BAA11167.1| C5-cytosine methylase [Salmonella enterica subsp. enterica serovar
Typhi]
gi|3421011|emb|CAA76526.1| M.Ecl18kI (DNA-methyltransferase) [Enterobacter cloacae]
gi|360047424|gb|AEV93420.1| type II DNA-methyltransferase StyD4I [Salmonella enterica subsp.
enterica serovar Typhi]
Length = 379
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 10/116 (8%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PC +++ GL+K +D R F I +I K PH +ENV +G + T + +
Sbjct: 141 PCVAFSQAGLKKGFNDTRGTLFFDIARIIKE--KKPHAFLLENVKNLLGHDKGRTFSIIK 198
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPL 124
L +Y I + FGVP +R R + + K ++ N++ P+PL
Sbjct: 199 NTLEELNYTVYYNIFAAKDFGVPQNRERIYIVGFNKE-----KVRNHEHFTFPTPL 249
>gi|169794286|ref|YP_001712079.1| cytosine-specific methyltransferase [Acinetobacter baumannii AYE]
gi|213159140|ref|YP_002321138.1| DNA cytosine methyltransferase [Acinetobacter baumannii AB0057]
gi|215481844|ref|YP_002324026.1| Modification methylase HgiDII(Cytosine-specificmethyltransferase
HgiDII) [Acinetobacter baumannii AB307-0294]
gi|332850048|ref|ZP_08432435.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
6013150]
gi|332871527|ref|ZP_08440021.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
6013113]
gi|417575262|ref|ZP_12226115.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii Canada
BC-5]
gi|421623462|ref|ZP_16064347.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
OIFC074]
gi|421641908|ref|ZP_16082439.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
IS-235]
gi|421647936|ref|ZP_16088347.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
IS-251]
gi|421657072|ref|ZP_16097353.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
Naval-83]
gi|421698463|ref|ZP_16138005.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii IS-58]
gi|421795872|ref|ZP_16231947.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
Naval-21]
gi|421799550|ref|ZP_16235541.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii Canada
BC1]
gi|169147213|emb|CAM85072.1| putative cytosine-specific methyltransferase [Acinetobacter
baumannii AYE]
gi|213058300|gb|ACJ43202.1| DNA cytosine methyltransferase [Acinetobacter baumannii AB0057]
gi|213986404|gb|ACJ56703.1| Modification methylase HgiDII(Cytosine-specificmethyltransferase
HgiDII) [Acinetobacter baumannii AB307-0294]
gi|332730897|gb|EGJ62203.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
6013150]
gi|332731381|gb|EGJ62673.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
6013113]
gi|400205995|gb|EJO36975.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii Canada
BC-5]
gi|404572763|gb|EKA77805.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii IS-58]
gi|408514660|gb|EKK16266.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
IS-235]
gi|408516130|gb|EKK17709.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
IS-251]
gi|408693248|gb|EKL38858.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
OIFC074]
gi|408714638|gb|EKL59778.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
Naval-83]
gi|410401023|gb|EKP53185.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
Naval-21]
gi|410409572|gb|EKP61500.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii Canada
BC1]
Length = 355
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 7/97 (7%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDT-----HAK 66
PCQP++ Q K D R + L +KP ++L VENV G + D + +
Sbjct: 81 PCQPFSTQNKSKSEDDIRR-TLLDETHRFISKLKPEYIL-VENVPGLQKIDKEKDGPYKR 138
Query: 67 MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 103
I L + Y EFI ++GVP R R+ LA +
Sbjct: 139 FITFLESKKYKITEFIAKSEEYGVPQKRKRFVLLASK 175
>gi|322514130|ref|ZP_08067198.1| modification methylase NgoPII [Actinobacillus ureae ATCC 25976]
gi|322120016|gb|EFX92002.1| modification methylase NgoPII [Actinobacillus ureae ATCC 25976]
Length = 356
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 110/299 (36%), Gaps = 61/299 (20%)
Query: 10 SPPCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
PPCQ ++ G + DAR F +++IL+ K P ENV G S+
Sbjct: 70 GPPCQSWSEAGALRGIDDARGQLFFDYIRILK-----SKQPKFFLAENVSGMLANRHSEA 124
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSP 123
++++ Y +++ +GV R R F + RK L + P
Sbjct: 125 VQNLLKMFDECGYDVTLTMVNAKDYGVAQERKRVFYIGYRKDLGIDFEF--------PVG 176
Query: 124 LLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQ-VNTETGFLSTGTAAVDD 182
+DD + K D WD L ++ P LE + + Q VN F TG
Sbjct: 177 STIDDDKKISLK----DIIWD-LKDTAVPA---LERNQTNPQAVNNNEYF--TG------ 220
Query: 183 FGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSL 242
S + + ++ W V ++C ++ GT
Sbjct: 221 --------------SFSPIFMSRNRVKAWHEQGFTVQASGRQCQLHPQAPKMEKHGT--- 263
Query: 243 LATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSI 301
N + + KE R T REVA + FP DF+F + + Y ++GN++ +
Sbjct: 264 -------NDYRFVAGKENLYRRMTIREVARIQGFPDDFKFIYK-NTNDAYKMIGNAVPV 314
>gi|417844498|ref|ZP_12490540.1| modification methylase EcoRII [Haemophilus haemolyticus M21639]
gi|341956695|gb|EGT83114.1| modification methylase EcoRII [Haemophilus haemolyticus M21639]
Length = 306
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 5 HAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFET 60
H LL+ PCQP+++ GL+K SD R F I ++ K P +ENV G +
Sbjct: 66 HDILLAGFPCQPFSQAGLKKGFSDTRGTLFFDIERILLE--KKPKAFLLENVKQLKGHDK 123
Query: 61 SDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
+T ++E L + Y +L FG+P +R R + +
Sbjct: 124 GNTLKVILEHLEKAGYKVFYDVLRAKDFGIPQNRERIYIVG 164
>gi|260890220|ref|ZP_05901483.1| modification methylase EcoRII [Leptotrichia hofstadii F0254]
gi|260859840|gb|EEX74340.1| modification methylase EcoRII [Leptotrichia hofstadii F0254]
Length = 293
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 6/101 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQ ++ G +K D R F ++ +I K P ++F+ENV T D T +
Sbjct: 43 PCQAFSIAGYRKGFEDERGEIFFQLARIIKD--KKPRVIFIENVKNLATHDNGNTFKVIK 100
Query: 69 EILANSDYLTQEFILSPLQFG-VPYSRPRYFCLAKRKPLSF 108
E L + Y ++ IL+ ++G VP +R R + + RK +
Sbjct: 101 ETLESYGYQLKKLILNASEYGNVPQNRERIYIIGFRKKEDY 141
>gi|425434431|ref|ZP_18814900.1| Modification methylase NgoBI [Microcystis aeruginosa PCC 9432]
gi|389676083|emb|CCH94847.1| Modification methylase NgoBI [Microcystis aeruginosa PCC 9432]
Length = 340
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 55/132 (41%), Gaps = 15/132 (11%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV---GFETSDTHAKMI 68
PCQP++ G K D R F +I ++ K P +ENV G + T ++
Sbjct: 84 PCQPFSICGNLKGFEDTRGTLFFEIARILK--AKQPASFILENVKQLQGHQQGKTLEVIL 141
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGND 128
+ L + Y T +L+ L FG+P R R F + R+ F P P L
Sbjct: 142 DTLQDLGYYTDYRVLNALNFGLPQKRERIFIVGFREARGFIW----------PKPALSRT 191
Query: 129 DMTVITKHDQPD 140
+T I + + D
Sbjct: 192 SLTEILEENVSD 203
>gi|425446969|ref|ZP_18826964.1| Modification methylase NgoBI [Microcystis aeruginosa PCC 9443]
gi|389732590|emb|CCI03507.1| Modification methylase NgoBI [Microcystis aeruginosa PCC 9443]
Length = 331
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 54/132 (40%), Gaps = 15/132 (11%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV---GFETSDTHAKMI 68
PCQP++ G K D R F +I ++ K P +ENV G + T ++
Sbjct: 84 PCQPFSICGDLKGFDDTRGTLFFEIARILK--AKQPAAFILENVKQLQGHQQGKTLEVIL 141
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGND 128
L + DY +L+ L FG+P R R F + R+ F P P L
Sbjct: 142 NTLQDLDYYIDYRVLNALNFGLPQKRERIFIVGFRESRGFIW----------PKPALSRT 191
Query: 129 DMTVITKHDQPD 140
+T I + + D
Sbjct: 192 SLTEILEENVSD 203
>gi|308184264|ref|YP_003928397.1| type II DNA modification enzyme [Helicobacter pylori SJM180]
gi|308060184|gb|ADO02080.1| type II DNA modification enzyme [Helicobacter pylori SJM180]
Length = 188
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 9/101 (8%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L++L+L+ P + ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
++ L Y+ + IL+ L +G P R R F + K
Sbjct: 126 FQRICNALKERGYILEHAILNALDYGAPQVRERVFLVGALK 166
>gi|421719923|ref|ZP_16159207.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R046Wa]
gi|407221246|gb|EKE91051.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R046Wa]
Length = 160
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 11/96 (11%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAF-SFLKILELIPHTVKPPHMLFVENVVGFETSDTHAK 66
L PPCQ Y+ G +K +A F +L++L+L VKP +F ENVVG S +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEEANLFKEYLRLLDL----VKPKIFVF-ENVVGL-MSMQKGQ 124
Query: 67 MIEILANS----DYLTQEFILSPLQFGVPYSRPRYF 98
+ + + N+ Y+ + IL+ L +GVP R R F
Sbjct: 125 LFKQICNAFKERGYILEHAILNALDYGVPQIRERVF 160
>gi|407005812|gb|EKE21848.1| hypothetical protein ACD_7C00113G0001, partial [uncultured
bacterium]
Length = 237
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 45/99 (45%), Gaps = 12/99 (12%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD------THA 65
PCQP+++ G +K D R F I E+I K P F+ENV D T
Sbjct: 28 PCQPFSQSGFKKGFKDDRGNLFFHIAEIIKQ--KKPKAFFLENVRHLLNHDDGKTFATIK 85
Query: 66 KMIEI-LANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 103
K IE L S Y I+ +FGVP RPR F + R
Sbjct: 86 KTIEKDLGYSFYYK---IVKASEFGVPQHRPRLFMVGFR 121
>gi|339009559|ref|ZP_08642131.1| modification methylase SPRI [Brevibacillus laterosporus LMG 15441]
gi|338774037|gb|EGP33568.1| modification methylase SPRI [Brevibacillus laterosporus LMG 15441]
Length = 307
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 5/101 (4%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF---ETSDTHAKMI 68
PCQ ++ G + +D R F +I+ ++ P LF+ENV G DT ++
Sbjct: 24 PCQAFSVAGKRAGFNDTRGTLFFEIMRFA--SILRPRYLFLENVEGLLNHNNGDTFETIL 81
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 109
L Y + +L+ FGVP +R R F + + S R
Sbjct: 82 RTLDEVGYDAEWNVLNSKNFGVPQNRARVFIIGHLRGASTR 122
>gi|319778406|ref|YP_004129319.1| DNA (cytosine-5-)-methyltransferase, partial [Taylorella
equigenitalis MCE9]
gi|317108430|gb|ADU91176.1| DNA (cytosine-5-)-methyltransferase [Taylorella equigenitalis MCE9]
Length = 160
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 6/101 (5%)
Query: 5 HAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFET 60
H +LL+ PC ++ G Q DAR F ++ +I + P ++F ENV V +
Sbjct: 61 HDFLLAGFPCHAFSAAGRQMGFDDARGTLFFEVARIINY--HKPQVVFAENVKNLVNHDK 118
Query: 61 SDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
T ++ L N Y +L+ FGVP +R R + +A
Sbjct: 119 GKTFKVIVSALKNLGYQVFHQVLNSKNFGVPQNRKRIYIVA 159
>gi|301597599|ref|ZP_07242607.1| DNA-cytosine methyltransferase [Acinetobacter baumannii AB059]
Length = 309
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 7/97 (7%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDT-----HAK 66
PCQP++ Q K D R + L +KP ++L VENV G + D + +
Sbjct: 35 PCQPFSTQNKSKSEDDIRR-TLLDETHRFISKLKPEYIL-VENVPGLQKIDKEKDGPYKR 92
Query: 67 MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 103
I L + Y EFI ++GVP R R+ LA +
Sbjct: 93 FITFLESKKYKITEFIAKSEEYGVPQKRKRFVLLASK 129
>gi|420448488|ref|ZP_14947368.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-44]
gi|393065842|gb|EJB66670.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-44]
Length = 222
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L+IL+L+ P + ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRILDLV-----KPKIFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
++ Y+ + IL+ L +GVP R R + K
Sbjct: 126 FQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGTHK 166
>gi|428212857|ref|YP_007086001.1| DNA-methyltransferase Dcm [Oscillatoria acuminata PCC 6304]
gi|428001238|gb|AFY82081.1| DNA-methyltransferase Dcm [Oscillatoria acuminata PCC 6304]
Length = 350
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 3 GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG--FET 60
GA + PPCQP++ G Q+ D+R + I + H P + ENV G F
Sbjct: 88 GASVIIGGPPCQPFSVGGNQQGVKDSRDGFPIFINAVERHQ---PAIAIFENVPGMRFRN 144
Query: 61 SDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 103
++I L DY + IL+ +GVP R R FC+A +
Sbjct: 145 KAYFEEIISSLKALDYGVEWEILTASDYGVPQRRQRLFCIAHK 187
>gi|67920370|ref|ZP_00513890.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501]
gi|67857854|gb|EAM53093.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501]
Length = 339
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 5/110 (4%)
Query: 1 MYGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG--F 58
+ GA + PPCQP++ G QK D+R F + I VKP LF ENV G +
Sbjct: 76 LSGASVIIGGPPCQPFSVGGKQKGLRDSRD-GFPIFINAIKQ-VKPDIWLF-ENVRGLLY 132
Query: 59 ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 108
+ K+ + L + Y+ + +L+ + FGVP +R R + R F
Sbjct: 133 KNKWYFDKITQSLQDLGYIIEWKLLNSVDFGVPQNRERLMVVGHRGKFQF 182
>gi|301513566|ref|ZP_07238803.1| DNA-cytosine methyltransferase [Acinetobacter baumannii AB058]
Length = 303
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 7/97 (7%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDT-----HAK 66
PCQP++ Q K D R + L +KP ++L VENV G + D + +
Sbjct: 29 PCQPFSTQNKSKSEDDIRR-TLLDETHRFISKLKPEYIL-VENVPGLQKIDKEKDGPYKR 86
Query: 67 MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 103
I L + Y EFI ++GVP R R+ LA +
Sbjct: 87 FITFLESKKYKITEFIAKSEEYGVPQKRKRFVLLASK 123
>gi|217033040|ref|ZP_03438509.1| hypothetical protein HPB128_193g7 [Helicobacter pylori B128]
gi|298736593|ref|YP_003729119.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8]
gi|216945239|gb|EEC23921.1| hypothetical protein HPB128_193g7 [Helicobacter pylori B128]
gi|298355783|emb|CBI66655.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8]
Length = 351
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 9/101 (8%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L++L+L+ P + ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLVK-----PKIFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
++ DY+ + IL+ L +GVP R R + K
Sbjct: 126 FKQICNAFKERDYILEHAILNALDYGVPQIRERVILVGALK 166
>gi|420427151|ref|ZP_14926196.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-9]
gi|393042084|gb|EJB43095.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-9]
Length = 335
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 126/318 (39%), Gaps = 57/318 (17%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGFETSDTHAK 66
L PPCQ Y+ G +K A F +L++L+L+ P + ENVVG S +
Sbjct: 58 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLVK-----PKIFVFENVVGL-MSMQKGQ 111
Query: 67 MIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPS 122
+ + + N+ DY+ + IL+ L +GVP R R + K SF+ Q P
Sbjct: 112 LFQQICNAFKERDYILEHAILNALDYGVPQIRERVILVGALK--SFK------QKFYFPK 163
Query: 123 PLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDD 182
P I H D+ L P++ +GD + G+L +
Sbjct: 164 P---------IKTHFSLKDA----LGDLPPIQS----GENGDAL----GYLKNADNVFLE 202
Query: 183 FGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYY--RYVKGTG 240
F + + + L+ + + G D + P+S R KS Y Y K
Sbjct: 203 FVRNSKELSEHSSPKNNEKLIKIMQTLKDGQNKDDL-PESLR----PKSGYINTYAKMWW 257
Query: 241 SLLATVQPKNKGKASSLKEQH---LRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGN 297
A +N SS + H R + RE A L SFP +++F + S + +GN
Sbjct: 258 EKPAPTITRNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKF--YGSASAKRLQIGN 315
Query: 298 SLSIAVVAPLLQYLFAQA 315
+ V PLL AQA
Sbjct: 316 A-----VPPLLSVALAQA 328
>gi|384899203|ref|YP_005774583.1| Type II DNA modification enzyme [Helicobacter pylori F30]
gi|317179147|dbj|BAJ56935.1| Type II DNA modification enzyme [Helicobacter pylori F30]
Length = 351
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 120/312 (38%), Gaps = 44/312 (14%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L++L+L+ P M ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKMFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSP 123
++ Y+ + IL+ L +GVP R R + K SF+ Q P P
Sbjct: 126 FKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALK--SFK------QKFHFPKP 177
Query: 124 LLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDF 183
I H D+ L P++ +GD + G+L +F
Sbjct: 178 ---------IKTHFSLKDA----LGDLPPIQS----GENGDAL----GYLKNADNVFLEF 216
Query: 184 GAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLL 243
+ + + L+ + + G + D + + + +T +Y + +
Sbjct: 217 VRNSKELSEHSSPKNNEKLIKIMQTLKDGQSKDDLPKNLRPKSGYTNTYAKMWWEKPAPT 276
Query: 244 ATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNS----L 299
T + + + R + RE A L SFP +++F S ++ +GN+ L
Sbjct: 277 ITRNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFCGSSSAKR--LQIGNAVPPLL 334
Query: 300 SIAVVAPLLQYL 311
S+A+V + +L
Sbjct: 335 SVALVHAVFDFL 346
>gi|315637499|ref|ZP_07892709.1| modification methylase EcoRII [Arcobacter butzleri JV22]
gi|315478217|gb|EFU68940.1| modification methylase EcoRII [Arcobacter butzleri JV22]
Length = 326
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQ ++ G +K D R F + ++ P ++F+ENV GF+ D T +
Sbjct: 91 PCQAFSIAGHRKGFEDIRGTLFFDVARIVDK--HKPQVVFLENVKGFKNHDKGNTFNTIK 148
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
L N Y +L+ FGVP +R R + +A
Sbjct: 149 STLENMGYRVFAEVLNAKDFGVPQNRERIYIIA 181
>gi|282879499|ref|ZP_06288233.1| DNA (cytosine-5-)-methyltransferase [Prevotella timonensis CRIS
5C-B1]
gi|281306646|gb|EFA98672.1| DNA (cytosine-5-)-methyltransferase [Prevotella timonensis CRIS
5C-B1]
Length = 438
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 43/102 (42%), Gaps = 5/102 (4%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAK 66
PCQ ++ G + DAR F + +I T P + ENV G D T
Sbjct: 134 GAPCQAFSMVGKRLGFEDARGTLFYEFARVIKET--QPKVFIFENVKGLINHDKGRTWMV 191
Query: 67 MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 108
M I A+ Y +L+ +G+P R R FC+ P+ F
Sbjct: 192 MHSIFADLGYQVNYRVLNSKDYGIPQHRERIFCIGFHTPVKF 233
>gi|408370532|ref|ZP_11168308.1| DNA-cytosine methyltransferase [Galbibacter sp. ck-I2-15]
gi|407744015|gb|EKF55586.1| DNA-cytosine methyltransferase [Galbibacter sp. ck-I2-15]
Length = 363
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 108/298 (36%), Gaps = 59/298 (19%)
Query: 10 SPPCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAK 66
PPCQ ++ G + D R F F++IL K P ENV G H
Sbjct: 69 GPPCQSWSEAGSLRGIQDKRGQLFFDFIRIL-----ADKQPKFFLAENVSGMLLERNHKA 123
Query: 67 MIEILA---NSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSP 123
+ I A Y +L+ +GVP R R F + RK L + + P P
Sbjct: 124 LENIKALFNECGYNLSFTMLNASDYGVPQDRKRVFFVGYRKDLGIKFKF--------PEP 175
Query: 124 LLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDF 183
+T+ ++ L E+ P + ++N GDQ + G
Sbjct: 176 TTSKKKITL-------ENKISDLKETAIPALQG-NYTN-GDQCSVPNHEYLIG------- 219
Query: 184 GAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLL 243
G + + +R S D S + G ++P + + TG +
Sbjct: 220 GFSSMYMSRNRVRSWDE----TSFTIQAGGRHAPIHPQAPKMVL-----------TGPDV 264
Query: 244 ATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSI 301
P KE R + RE A + +FP DF F H+ ++ Y ++GN++ +
Sbjct: 265 RIFAPG--------KEHLYRRLSVRECARIQTFPDDFIF-HYKAVAAGYKMIGNAVPV 313
>gi|281420730|ref|ZP_06251729.1| DNA (cytosine-5-)-methyltransferase [Prevotella copri DSM 18205]
gi|281405022|gb|EFB35702.1| DNA (cytosine-5-)-methyltransferase [Prevotella copri DSM 18205]
Length = 432
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 5/103 (4%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAK 66
PCQ ++ G + DAR F + ++ T P + ENV G + D T
Sbjct: 129 GAPCQAFSMVGHRLGFEDARGTLFYEFARVVKET--EPKVFLFENVRGLLSHDKGRTWHV 186
Query: 67 MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 109
+ +I Y + +L+ +G+P R R FCL +KP F+
Sbjct: 187 IHDIFEELGYDVKFRVLNSCDYGIPQHRERVFCLGFKKPTDFK 229
>gi|386752472|ref|YP_006225691.1| type II DNA modification methyltransferase [Helicobacter pylori
Shi169]
gi|384558730|gb|AFH99197.1| type II DNA modification methyltransferase [Helicobacter pylori
Shi169]
Length = 348
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 117/312 (37%), Gaps = 45/312 (14%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L++L+L+ P M ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKMFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSP 123
++ Y+ + IL+ L +GVP R R + K SF+ Q P P
Sbjct: 126 FKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALK--SFK------QKFHFPKP 177
Query: 124 LLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDF 183
I H D+ L P++ +GD + G+L +F
Sbjct: 178 ---------IKTHFSLKDA----LGDLPPIQS----GENGDAL----GYLKNADNVFLEF 216
Query: 184 GAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLL 243
+ + + L+ + + G + D + + + +T +Y + +
Sbjct: 217 VRNSKELSEHSSPKNNEKLIKIMQTLKDGQSKDDLPKNLRPKSGYTNTYAKMWWEKPAPT 276
Query: 244 ATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAV 303
T + + + R + RE A L SFP +++F S ++ +GN+
Sbjct: 277 ITRNFSTPSSSRCIHPRDSRALSVREGARLQSFPDNYKFCGSTSAKR--LQIGNA----- 329
Query: 304 VAPLLQYLFAQA 315
V PLL A A
Sbjct: 330 VPPLLSVALAHA 341
>gi|434398887|ref|YP_007132891.1| DNA-cytosine methyltransferase [Stanieria cyanosphaera PCC 7437]
gi|428269984|gb|AFZ35925.1| DNA-cytosine methyltransferase [Stanieria cyanosphaera PCC 7437]
Length = 359
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 121/309 (39%), Gaps = 55/309 (17%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF---ETSDTHAK 66
PPCQ ++ G Q+ D+R FL+ + ++ K P ENV G + +
Sbjct: 78 GPPCQSWSEAGSQRGIQDSRGQLFLEYIRILED--KQPLFFLAENVSGMLHKQHGLALQQ 135
Query: 67 MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLG 126
+I + +L +L+ + + VP R R + R L+ + N L+++
Sbjct: 136 IINAFEEAGFLVNYSLLNAVDYNVPQDRKRIIFVGFRADLNLKFDF--NWLVKNYQIHQL 193
Query: 127 NDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAA 186
N+ I WD L ES P + + ++ N +T L A+ DF +
Sbjct: 194 NNLKKAI---------WD-LRESALPAQ-------AKNKTNRDTCILPNHEYAIGDFSSI 236
Query: 187 EETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATV 246
+ +R S D P I+ G I +P + + K + + ++
Sbjct: 237 --YMSRNRVRSWDE---PSFTIQASGRHAPI-HPQANKMINIGKDKFIFDPN------SI 284
Query: 247 QPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAP 306
P R + RE A + +FP +F F +++L Y ++GN++ +
Sbjct: 285 YP-------------YRRLSLRECARIQTFPDNFLF-DYINLNAGYKIVGNAVPVN---- 326
Query: 307 LLQYLFAQA 315
L Y A+A
Sbjct: 327 -LGYALAEA 334
>gi|288559284|ref|YP_003422770.1| DNA-cytosine methyltransferase [Methanobrevibacter ruminantium M1]
gi|288541994|gb|ADC45878.1| DNA-cytosine methyltransferase [Methanobrevibacter ruminantium M1]
Length = 339
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 51/117 (43%), Gaps = 12/117 (10%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQP++ G +K D R F +I ++ K P M +ENV G D T +
Sbjct: 98 PCQPFSIGGYRKGFCDTRGTLFFEIERIL--KAKKPQMFLLENVKGLTNHDKGKTFKVIK 155
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK-------PLSFRCQLLNNQLL 118
E L N Y +L+ +GVP +R R F + + PL F + N LL
Sbjct: 156 ESLWNLGYSIFYQVLNSKDYGVPQNRERIFIVGFKDNVNTFKFPLPFENKANINDLL 212
>gi|336431797|ref|ZP_08611639.1| hypothetical protein HMPREF0991_00758 [Lachnospiraceae bacterium
2_1_58FAA]
gi|336019816|gb|EGN49538.1| hypothetical protein HMPREF0991_00758 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 437
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 137/347 (39%), Gaps = 55/347 (15%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G ++ DAR F +I L+ +PP++L +ENV G + + A IL
Sbjct: 90 PCQAFSVAGKRQGFEDARGTLFFEIARLVK-ARRPPYLL-LENVPGLLSHNKGATFNTIL 147
Query: 72 AN---SDYLTQEFILSPLQFGVPYSRPRYF--------CLAKRKPLSFRCQLLNNQLLRS 120
Y + +L+ FGVP SR R + C K P + + Q++
Sbjct: 148 YTLYELGYHVEWQVLNSKDFGVPQSRKRVYLIGYLDERCAGKILPFTGANKKALVQIVPG 207
Query: 121 --PSPLLGNDDMT-VITKHDQPDDSWDKLLESCDPV----ERFLEFSNSGDQV------- 166
S + D ++ IT L + P+ ++ + + GD +
Sbjct: 208 CQGSRVYSKDGLSCTITSTAGGMGGKTGLYDVGVPIKENTKKGYKMAYEGDSIDLGYAGM 267
Query: 167 NTETGFLSTGTAAVDDFGAAEETV------------EVDRCVSI-DHFLVPLSLIERWGS 213
NT G + A G+ + TV EV RC++ + L L ER G+
Sbjct: 268 NTRRGRVGHQVAHTLTTGSTQGTVHFVDLDSRLRVTEVARCITTRQNSLSDKHLGERSGA 327
Query: 214 AMD-----IVYPDSKRCCCFTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPR 268
+ ++ P+ K + R++K + T+ ++ + E +R TPR
Sbjct: 328 LEEEGPRAVLTPERKN----VRQQGRWMKAPEEEMFTLTAQD--RHGVCYEGRIRRLTPR 381
Query: 269 EVANLHSFPGDFQFPHHLSLR---QRYALLGNSLSIAVVAPLLQYLF 312
E L + + Q L L Q Y GN +++ V+ + + LF
Sbjct: 382 ECLRLQGYY-EEQIDKILELNSDAQAYKQAGNGVTVNVIEAIGRRLF 427
>gi|317504402|ref|ZP_07962385.1| modification methylase Sau3AI [Prevotella salivae DSM 15606]
gi|315664482|gb|EFV04166.1| modification methylase Sau3AI [Prevotella salivae DSM 15606]
Length = 579
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 67/336 (19%), Positives = 132/336 (39%), Gaps = 46/336 (13%)
Query: 12 PCQPYTRQGLQKQSSDARA------FSFLKILELIPHTVKPPHMLFVENVVGFETSDTH- 64
PCQ Y+ S + +IL+ + PH LF ENV +S
Sbjct: 86 PCQDYSVASTLSHSGGIEGKKGVLWWQIYRILQ--EKGEQRPHYLFFENVDRLLSSPAKQ 143
Query: 65 -----AKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA-------KRKPLSFRCQL 112
A ++ LAN Y + I++ ++G+P R R + + ++K F+ +
Sbjct: 144 RGRDFAIILASLANLGYTIEWRIINAAEYGMPQRRRRIYIIGYYKGSTIEKKIEDFKNWI 203
Query: 113 LNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGF 172
L + ++ PL + K + + ++ ++ + ++ F N+G N +
Sbjct: 204 LFDGVMAKAFPLEQKNKSGSSFK---IEGTIKEVSDNFNVKQKNSPFGNTGIMTNRQVYT 260
Query: 173 LSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSY 232
+ T T + VD + D+F +P+S I RW +K+ +K
Sbjct: 261 IDT-TPVYNGTHMTLGGNIVDESLVPDNFFIPISDIARWEYE-----KGAKKIERTSKEG 314
Query: 233 YRYVKGTGSLL--------ATVQPKNKGKASSLKEQHL--------RYFTPREVANLHSF 276
Y+Y+ G + + +G S + +H+ R P E+ L+ F
Sbjct: 315 YKYIFSEGGMSFPDVLDRPSRTIITGEGGTSPSRFKHVIRTPSGRYRRLIPLELERLNMF 374
Query: 277 PGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 312
P + + ++ +R L+GN+L ++ + Q L+
Sbjct: 375 PDNHTYHPDVNDGRRAFLMGNALVCGIIQRMGQSLY 410
>gi|308229518|gb|ADO24171.1| M.AciI [Arthrobacter citreus]
Length = 703
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 7/111 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQP++ G + D R F + +I K P +ENV G + D H ++ +
Sbjct: 453 PCQPFSIAGKRLGFEDTRGTLFFDVARIIKD--KRPKAFILENVAGIVSHD-HGNTLDTI 509
Query: 72 ANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLL 118
+N +Y + +++ +GVP +R R++C+ L +N++
Sbjct: 510 SNILEDLNYTFEWKLMNAKDYGVPQNRNRWYCVGINNDLGVVSTSMNSEFF 560
>gi|255066464|ref|ZP_05318319.1| modification methylase EcoRII [Neisseria sicca ATCC 29256]
gi|298369378|ref|ZP_06980696.1| modification methylase EcoRII [Neisseria sp. oral taxon 014 str.
F0314]
gi|255049344|gb|EET44808.1| modification methylase EcoRII [Neisseria sicca ATCC 29256]
gi|298283381|gb|EFI24868.1| modification methylase EcoRII [Neisseria sp. oral taxon 014 str.
F0314]
Length = 357
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQP+++ GL+K +D R F I E+I K P +ENV G + D T +
Sbjct: 118 PCQPFSQAGLKKGFTDTRGTMFFHIEEIIRQ--KHPKAFLLENVKGLKGHDKGRTFQTIY 175
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 103
+ L Y +++ F +P +R R + + R
Sbjct: 176 DSLTALGYTVNAKVMAAKDFNLPQNRERIYIVGFR 210
>gi|207092664|ref|ZP_03240451.1| type II DNA modification enzyme [Helicobacter pylori
HPKX_438_AG0C1]
gi|207108938|ref|ZP_03243100.1| type II DNA modification enzyme [Helicobacter pylori
HPKX_438_CA4C1]
Length = 160
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 11/96 (11%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAF-SFLKILELIPHTVKPPHMLFVENVVGFETSDTHAK 66
L PPCQ Y+ G +K A F +L++L+L VKP +F ENVVG S +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDL----VKPKIFVF-ENVVGL-MSMQKGQ 124
Query: 67 MIEILANS----DYLTQEFILSPLQFGVPYSRPRYF 98
+ + + N+ Y+ + IL+ L +GVP R R F
Sbjct: 125 LFQQICNAFKERGYILEHAILNALDYGVPQIRERVF 160
>gi|444375329|ref|ZP_21174624.1| type II DNA modification methyltransferase [Helicobacter pylori
A45]
gi|443620177|gb|ELT80628.1| type II DNA modification methyltransferase [Helicobacter pylori
A45]
Length = 160
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGFETSDTHAK 66
L PPCQ Y+ G +K A F +L++L+L+ P M ENVVG S +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKMFVFENVVGL-MSMQKGQ 124
Query: 67 MIEILANS----DYLTQEFILSPLQFGVPYSRPRYF 98
+ + + N+ Y+ + IL+ L +GVP R + F
Sbjct: 125 LFKQICNAFKERGYILEHAILNALDYGVPQIREKVF 160
>gi|427400236|ref|ZP_18891474.1| DNA (cytosine-5-)-methyltransferase [Massilia timonae CCUG 45783]
gi|425720976|gb|EKU83891.1| DNA (cytosine-5-)-methyltransferase [Massilia timonae CCUG 45783]
Length = 328
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 16/100 (16%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKP-----PHMLFVENVVGFETSDTH 64
PPCQP++ G QK + D R +++P V+ P ++ +ENV G +S
Sbjct: 73 GPPCQPFSVAGNQKAADDIR--------DMLPEFVRAVAEIRPKLVLMENVAGLASSRHE 124
Query: 65 AKMIEILANSDYLTQEF---ILSPLQFGVPYSRPRYFCLA 101
+ E LA L E +L+ QFGVP R R +
Sbjct: 125 TYLNEKLAIISELGYEVEFKVLNSAQFGVPQERNRVIVIG 164
>gi|80159730|ref|YP_398474.1| putative DNA methylase [Clostridium phage c-st]
gi|416355462|ref|ZP_11681841.1| prophage LambdaSa04, methyltransferase C-5 [Clostridium botulinum C
str. Stockholm]
gi|78675320|dbj|BAE47742.1| putative DNA methylase [Clostridium phage c-st]
gi|338195202|gb|EGO87516.1| prophage LambdaSa04, methyltransferase C-5 [Clostridium botulinum C
str. Stockholm]
Length = 370
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 13/108 (12%)
Query: 4 AHAWLLSPPCQPY------TRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG 57
A W PC+ TR GL+ + S FL + +L+ + P +LF+ENV G
Sbjct: 64 ADIWCFGFPCKNMSTANVTTRTGLKGEQSGL----FLIMCDLLNKMKRKPQILFIENVQG 119
Query: 58 FETSDTHAKMIEILANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAK 102
F T + + +E L L + I S +Q+ VP +R R + + K
Sbjct: 120 FSTINGGSDFLEALVRLHKLGYDIKYEISSAMQYDVPQNRIRTYLICK 167
>gi|386754006|ref|YP_006227224.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Shi112]
gi|384560264|gb|AFI00731.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Shi112]
Length = 188
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L++L+L+ P M ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKMFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
++ Y+ + IL+ L +GVP R R + K
Sbjct: 126 FKRICNAFKERGYILEHAILNALDYGVPQIRERVILVGALK 166
>gi|385216117|ref|YP_005776074.1| Type II DNA modification enzyme [Helicobacter pylori F32]
gi|317180646|dbj|BAJ58432.1| Type II DNA modification enzyme [Helicobacter pylori F32]
Length = 348
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 117/312 (37%), Gaps = 45/312 (14%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L++L+L+ P M ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKMFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSP 123
++ Y+ + IL+ L +GVP R R + K SF+ Q P P
Sbjct: 126 FKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALK--SFK------QKFHFPKP 177
Query: 124 LLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDF 183
I H D+ L P++ +GD + G+L +F
Sbjct: 178 ---------IKTHFSLKDA----LGDLPPIQS----GENGDAL----GYLKNADNVFLEF 216
Query: 184 GAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLL 243
+ + + L+ + + G + D + + + +T +Y + +
Sbjct: 217 VRNSKELSEHSSPKNNEKLIKIMQTLKDGQSKDDLPKNLRPKSGYTNTYAKMWWEKPAPT 276
Query: 244 ATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAV 303
T + + + R + RE A L SFP +++F S ++ +GN+
Sbjct: 277 ITRNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFCGSASAKRLQ--IGNA----- 329
Query: 304 VAPLLQYLFAQA 315
V PLL A A
Sbjct: 330 VPPLLSVALAHA 341
>gi|227485932|ref|ZP_03916248.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus lactolyticus ATCC
51172]
gi|227235977|gb|EEI85992.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus lactolyticus ATCC
51172]
Length = 358
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 5 HAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFET 60
H LL+ PCQ ++ G +K D R F + ++ K P + +ENV + ++
Sbjct: 68 HDLLLAGFPCQSFSIAGKRKGFEDTRGTLFYDVARILNE--KKPKLFLLENVKNLISHDS 125
Query: 61 SDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPR-YFC 99
S T +M++IL + +Y I++ ++ GVP +R R Y C
Sbjct: 126 SRTIKQMLKILNDLNYTVDFTIINSVESGVPQNRERTYIC 165
>gi|428781246|ref|YP_007173032.1| DNA-methyltransferase Dcm [Dactylococcopsis salina PCC 8305]
gi|428695525|gb|AFZ51675.1| DNA-methyltransferase Dcm [Dactylococcopsis salina PCC 8305]
Length = 433
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 123/329 (37%), Gaps = 58/329 (17%)
Query: 10 SPPCQPYTRQGLQ--KQSSDARAFSFLK-ILELIPHTVKPPHMLFVENVVGFETSDTH-- 64
PPCQ ++ G + ++ F FL+ +LEL P +ENV G +
Sbjct: 86 GPPCQGFSLIGKRVLDDERNSLVFHFLRLVLEL------KPKYFVMENVAGMGIGKSQQL 139
Query: 65 -AKMIEILANSDYLTQ--EFILSPLQFGVPYSRPRYFCLAKR-------------KPLSF 108
++I+ + Y Q +L+ FGVP +R R F L R KP
Sbjct: 140 LEELIKKFQENGYQVQLPYQVLNASNFGVPQNRKRLFLLGCRQDQTLPNYPKPMTKPPEA 199
Query: 109 RCQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNT 168
+ LLN L SP+ +D + D P+ +E + E + D V
Sbjct: 200 KVMLLNCYLPNSPT----VEDAII----DLPE------------IENYPELLHQ-DTVKA 238
Query: 169 ETGFLSTGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCF 228
+ G S + + G ++ R + L S +
Sbjct: 239 DFGQPSFYSRQLRQNGKTDDDFSYPRYYNSSLLTASLRTKHTEKSIFRFKATPPGKTEPV 298
Query: 229 TKSYYRYVKGTGSLLATVQPKNKGKASS---LKEQHLRYFTPREVANLHSFPGDFQFPHH 285
++ Y + +G + L P N+G +S + H R T RE A LHS+P F+F H
Sbjct: 299 SRFYKLHPQGISNTLRAGTPSNRGAYTSPRPIHPYHPRCITVREAARLHSYPDWFRF--H 356
Query: 286 LSLRQRYALLGNSLSIAVVAPLLQYLFAQ 314
++ + +GNS V P L AQ
Sbjct: 357 VTKWHGFRQIGNS-----VPPFLAKAVAQ 380
>gi|20068992|gb|AAM09644.1|AF458984_2 m6 adenine and m5 cytosine DNA methyltransferase [Acinetobacter
lwoffii]
Length = 952
Score = 47.8 bits (112), Expect = 0.007, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 11 PPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDT---HAKM 67
PPCQ +++ G ++ D R FL+ +E I +V P ++ +ENV GF T D + +
Sbjct: 801 PPCQGFSQAG-KRIIDDPRNQLFLEFIESI--SVINPKVVVMENVQGFLTLDKGNFYDQT 857
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 106
E+L Y+ + +L+ + +GVP R R L K L
Sbjct: 858 KELLEELGYVCEGRLLNTVHYGVPQKRKRVIILGVHKNL 896
>gi|188527268|ref|YP_001909955.1| type II DNA modification methyltransferase [Helicobacter pylori
Shi470]
gi|188143508|gb|ACD47925.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Shi470]
Length = 348
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 118/312 (37%), Gaps = 45/312 (14%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L++L+L+ P M ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKMFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSP 123
++ Y+ + IL+ L +GVP R R + K SF+ Q P P
Sbjct: 126 FKQICNAFKERGYVLEHAILNALDYGVPQIRERVILVGVLK--SFK------QKFHFPKP 177
Query: 124 LLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDF 183
I H D+ L P++ +GD + G+L +F
Sbjct: 178 ---------IKTHFSLKDA----LGDLPPIQS----GENGDAL----GYLKNADNVFLEF 216
Query: 184 GAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLL 243
+ + + L+ + + + G + D + + + +T +Y + +
Sbjct: 217 VRNSKELSEHSSPKNNEKLIKIMQMLKDGQSKDDLPKNLRPKSGYTNTYAKMWWEKPAPT 276
Query: 244 ATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAV 303
T + + + R + RE A L SFP +++F S ++ +GN+
Sbjct: 277 ITRNFSTPSSSRCIHPRDSRALSVREGARLQSFPDNYKFCGSTSAKR--LQIGNA----- 329
Query: 304 VAPLLQYLFAQA 315
V PLL A A
Sbjct: 330 VPPLLSVALAHA 341
>gi|434398940|ref|YP_007132944.1| DNA-cytosine methyltransferase [Stanieria cyanosphaera PCC 7437]
gi|428270037|gb|AFZ35978.1| DNA-cytosine methyltransferase [Stanieria cyanosphaera PCC 7437]
Length = 446
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 10/133 (7%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQP++ G ++ D R F +I +++ K P +ENV G D T ++
Sbjct: 80 PCQPFSSAGTRQGFLDTRGTLFFEIEKIL--QAKQPFGFLLENVEGLVKHDRGRTLGTIL 137
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPR-YFCLAKRKPLSF----RCQLLNNQLLRSPSP 123
L DY +L+ FG+P R R Y K+ P+S + Q+L + P
Sbjct: 138 NKLEQLDYHVTWKVLNAKNFGIPQDRKRIYIAGNKKHPISLEFSNQKQVLLKNIFEIGKP 197
Query: 124 LLGNDDMTVITKH 136
+L D + + H
Sbjct: 198 VLTTDLIQRLLSH 210
>gi|386730222|ref|YP_006196605.1| Type II restriction-modification system methylation subunit
[Staphylococcus aureus subsp. aureus 71193]
gi|387603777|ref|YP_005735298.1| modification methylase EcoRII (Cytosine-specificmethyltransferase
EcoRII) (M.EcoRII) [Staphylococcus aureus subsp. aureus
ST398]
gi|404479805|ref|YP_006711235.1| DNA Methyltransferase [Staphylococcus aureus 08BA02176]
gi|418311836|ref|ZP_12923354.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus aureus subsp.
aureus 21331]
gi|418979015|ref|ZP_13526814.1| Type II restriction-modification system methylation subunit
[Staphylococcus aureus subsp. aureus DR10]
gi|283471715|emb|CAQ50926.1| modification methylase EcoRII (Cytosine-specificmethyltransferase
EcoRII) (M.EcoRII) [Staphylococcus aureus subsp. aureus
ST398]
gi|365233356|gb|EHM74312.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus aureus subsp.
aureus 21331]
gi|379993286|gb|EIA14733.1| Type II restriction-modification system methylation subunit
[Staphylococcus aureus subsp. aureus DR10]
gi|384231515|gb|AFH70762.1| Type II restriction-modification system methylation subunit
[Staphylococcus aureus subsp. aureus 71193]
gi|404441294|gb|AFR74487.1| DNA Methyltransferase [Staphylococcus aureus 08BA02176]
Length = 397
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 51/117 (43%), Gaps = 12/117 (10%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ +++ GL+K +D R F I ++ K P +ENV + D K +I+
Sbjct: 155 PCQAFSQAGLKKGFNDTRGTLFFDIARIL--KAKRPKCFLLENVKNLRSHD-KGKTFDII 211
Query: 72 ANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPL 124
N+ DY IL FG P +R R + + K Q+ N + P PL
Sbjct: 212 MNTLLELDYDVSSSILRARDFGCPQNRERIYIVGFDKQ-----QIKNAENFSFPEPL 263
>gi|408789603|ref|ZP_11201258.1| DNA-cytosine methyltransferase [Lactobacillus florum 2F]
gi|408521209|gb|EKK21195.1| DNA-cytosine methyltransferase [Lactobacillus florum 2F]
Length = 414
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 6/109 (5%)
Query: 4 AHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD- 62
A L PCQP++ G +K D R F + L +I P ++F+ENV T D
Sbjct: 72 ADVLLAGFPCQPFSVAGFRKGFDDNRGDLFFETLRIIKSL--QPRVVFLENVKNLVTHDH 129
Query: 63 --THAKMIEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLAKRKPLSF 108
T + E + ++ Y + +L+ ++G VP +R R + + + ++F
Sbjct: 130 GNTFKVIREFMVHTGYYIKWKVLNSKEYGNVPQNRERIYVVGFKDKVAF 178
>gi|410864690|ref|YP_006979301.1| Modification methylase NaeI [Propionibacterium acidipropionici ATCC
4875]
gi|410821331|gb|AFV87946.1| Modification methylase NaeI [Propionibacterium acidipropionici ATCC
4875]
Length = 329
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 13/112 (11%)
Query: 2 YGAHAW-----LLSP--PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVEN 54
Y AH W LL+ PC P++ G Q + D R F + L L+ T+ P + +EN
Sbjct: 58 YSAHEWRGRIDLLAGGVPCPPFSIAGKQLGADDERDL-FPQALRLVEETL--PDAVMLEN 114
Query: 55 VVGFET---SDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 103
V G + S ++I+ LA+ Y T+ +++ + GVP RPR+ + R
Sbjct: 115 VKGLSSAKFSGYREQVIKRLADLGYETEWQVINASEHGVPQLRPRFILVGLR 166
>gi|386826504|ref|ZP_10113611.1| DNA-methyltransferase Dcm [Beggiatoa alba B18LD]
gi|386427388|gb|EIJ41216.1| DNA-methyltransferase Dcm [Beggiatoa alba B18LD]
Length = 319
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQP++ G +D R F I ++ K P +ENV T D T A ++
Sbjct: 70 PCQPFSIAGKGLGFADTRGTLFFNIETIL--ATKRPRAFLLENVKRLTTHDNGKTFAIIL 127
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 109
E L +Y +L+ L FG+P R R + + +PL+F+
Sbjct: 128 EKLQQLNYSVFYQVLNSLDFGLPQKRERIYIVGFSQPLNFQ 168
>gi|371496135|ref|YP_004957283.1| unnamed protein product [Planktothrix phage PaV-LD]
gi|325587502|gb|ADZ31517.1| site-specific DNA methylase [Planktothrix phage PaV-LD]
Length = 346
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 113/315 (35%), Gaps = 67/315 (21%)
Query: 9 LSPPCQPYT--RQGLQKQSSDARA----FSFLKILELIPHTVKPPHMLFVENVVGFETSD 62
+SPPCQ Y+ R+G D A ++ IL P + +ENV G+ S
Sbjct: 69 MSPPCQQYSNARRGDIPDHKDKDAGLYCCDYIAILS--------PRWVVLENVPGYAKSP 120
Query: 63 THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPS 122
T ++ L + Y IL +GVP +R R A + P
Sbjct: 121 TFEAILRSLIDCGYRYHWLILDAADYGVPQNRKRLIMWAVKN--------------SEPL 166
Query: 123 PLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDD 182
P +P W + + P E ++ + E G+L A+ D
Sbjct: 167 PYF---------PESKPRKGWYQAISDLIPEMSDCELADWQIKRLNELGYLP--EKALID 215
Query: 183 FGAAEETVEVDRCVSIDHFLV---------PLSLIERWGSAMDIVYPDSKRCCCFTKSYY 233
G R + F + P+ LI R G+ + + P + C T
Sbjct: 216 IGKQLIRQATVRESNDPSFTIVGGHVNSHSPILLIPRAGACIKNILPTPQNKPCPT---- 271
Query: 234 RYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYA 293
+ A ++ A ++ ++ + + A L +FP D++ P SL Q+
Sbjct: 272 --------IRAMASGRHTHWADIMEGSQVKRISQKATARLQTFPDDYKLPEAKSLSQQ-- 321
Query: 294 LLGNSLSIAVVAPLL 308
++GN+ V PLL
Sbjct: 322 IIGNA-----VPPLL 331
>gi|384895833|ref|YP_005769822.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori 35A]
gi|315586449|gb|ADU40830.1| possible DNA (cytosine-5-)-methyltransferase [Helicobacter pylori
35A]
Length = 351
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 120/312 (38%), Gaps = 44/312 (14%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L++L+L+ P M ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKMFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSP 123
++ Y+ + IL+ L +GVP R R + K SF+ Q P P
Sbjct: 126 FKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGVLK--SFK------QKFHFPKP 177
Query: 124 LLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDF 183
I H D+ L P++ +GD + G+L +F
Sbjct: 178 ---------IKTHFSLKDA----LGDLPPIQS----GENGDAL----GYLKNADNVFLEF 216
Query: 184 GAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLL 243
+ + + L+ + + G + D + + + +T +Y + +
Sbjct: 217 VRNSKELSEHSSPKNNEKLIKIMQTLKDGQSKDDLPKNLRPKSGYTNTYAKMWWEKPAPT 276
Query: 244 ATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNS----L 299
T + + + R + RE A L SFP +++F S ++ +GN+ L
Sbjct: 277 ITRNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFCGSSSTKR--LQIGNAVPPLL 334
Query: 300 SIAVVAPLLQYL 311
S+A+V + +L
Sbjct: 335 SVALVHAVFDFL 346
>gi|384890848|ref|YP_005764981.1| DNA cytosine methyltransferase [Helicobacter pylori 908]
gi|307637157|gb|ADN79607.1| DNA cytosine methyltransferase [Helicobacter pylori 908]
Length = 165
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGFETSDTHAK 66
L PPCQ Y+ G +K A F +L+IL+L VKP +F ENVVG S +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRILDL----VKPKIFVF-ENVVGL-ISMQKGQ 124
Query: 67 MIEILANS----DYLTQEFILSPLQFGVPYSRPR 96
+ + + N+ Y+ + IL+ L +GVP R R
Sbjct: 125 LFQRICNAFKERGYILEHAILNALDYGVPQVRER 158
>gi|167746073|ref|ZP_02418200.1| hypothetical protein ANACAC_00768 [Anaerostipes caccae DSM 14662]
gi|373121714|ref|ZP_09535581.1| DNA (cytosine-5-)-methyltransferase [Erysipelotrichaceae bacterium
21_3]
gi|167654588|gb|EDR98717.1| DNA (cytosine-5-)-methyltransferase [Anaerostipes caccae DSM 14662]
gi|371664693|gb|EHO29862.1| DNA (cytosine-5-)-methyltransferase [Erysipelotrichaceae bacterium
21_3]
Length = 312
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTV---KPPHMLFVENVVGFETSD---THA 65
PCQP++ G +K D R F +I E++ + + + P + +ENV T + T
Sbjct: 70 PCQPFSMMGAEKGFEDTRGTLFFRIAEILKYKIDQGRKPRTVILENVRSLRTHNKGKTFK 129
Query: 66 KMIEILANS-DYLTQEFILSPLQFGVPYSRPRYF--CLA 101
+ +L N +Y + +L+ +G+P +R R + C A
Sbjct: 130 TIKRVLENELNYKVFDQVLNTADYGIPQTRNRTYIVCFA 168
>gi|423467247|ref|ZP_17444015.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus BAG6O-1]
gi|423625948|ref|ZP_17601726.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus VD148]
gi|401253295|gb|EJR59537.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus VD148]
gi|402414481|gb|EJV46813.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus BAG6O-1]
Length = 350
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 22/148 (14%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIP-----HTVKPPHMLF--VENVVGFETSDTH 64
PCQ ++ G +K D R F +IL++I + KP ++ V+N+ G + +T
Sbjct: 75 PCQAFSIAGYRKGFEDERGNMFFQILDVIDAQEKMYGTKPKAIMLENVKNLKGHDKGNTF 134
Query: 65 AKMIEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLAKRKPLSFRCQLLNNQLLRS--- 120
+ E L Y + +L+ +++G VP +R R + + L N+L
Sbjct: 135 KVIKECLEEKGYTIKAKVLNSMEYGNVPQNRERIYIVG----------FLENELTEKFDF 184
Query: 121 PSPL-LGNDDMTVITKHDQPDDSWDKLL 147
P+P+ L N TVI ++ +D K+
Sbjct: 185 PAPIPLTNTLNTVINRNSSINDEKYKVF 212
>gi|227486883|ref|ZP_03917199.1| DNA restriction-modification system, DNA methylase [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227541955|ref|ZP_03972004.1| DNA restriction-modification system DNA methylase [Corynebacterium
glucuronolyticum ATCC 51866]
gi|227092957|gb|EEI28269.1| DNA restriction-modification system, DNA methylase [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227182398|gb|EEI63370.1| DNA restriction-modification system DNA methylase [Corynebacterium
glucuronolyticum ATCC 51866]
Length = 332
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 46/99 (46%), Gaps = 6/99 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS---DTHAKMI 68
PC P++ G Q+ D R F + L+LI P + +ENV G D AK+I
Sbjct: 79 PCPPFSIAGKQRGPEDERDL-FPRALDLIDQI--KPRAVLLENVKGLGQKRFDDYRAKII 135
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 107
E L Y ++ +GVP RPR+ +A RK S
Sbjct: 136 ERLNQMGYDVFWELIQSADYGVPQLRPRFILVALRKEYS 174
>gi|429742796|ref|ZP_19276407.1| DNA (cytosine-5-)-methyltransferase [Neisseria sp. oral taxon 020
str. F0370]
gi|429167658|gb|EKY09557.1| DNA (cytosine-5-)-methyltransferase [Neisseria sp. oral taxon 020
str. F0370]
Length = 357
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQP+++ GL+K +D R F I E+I K P +ENV G + D T +
Sbjct: 118 PCQPFSQAGLKKGFTDTRGTMFFHIEEIIRQ--KRPKAFLLENVKGLKGHDKGRTFKTIY 175
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
+ L+ Y +++ F +P +R R + +
Sbjct: 176 DSLSALGYTVSAKVMAAKDFNLPQNRERIYIVG 208
>gi|342732478|ref|YP_004771317.1| cytosine-specific methyltransferase [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|384455872|ref|YP_005668467.1| DNA-cytosine methyltransferase [Candidatus Arthromitus sp.
SFB-mouse-Yit]
gi|417960381|ref|ZP_12602994.1| Cytosine-specific methyltransferase [Candidatus Arthromitus sp.
SFB-1]
gi|417965740|ref|ZP_12607224.1| Cytosine-specific methyltransferase [Candidatus Arthromitus sp.
SFB-4]
gi|417968993|ref|ZP_12609958.1| Cytosine-specific methyltransferase [Candidatus Arthromitus sp.
SFB-co]
gi|418016119|ref|ZP_12655684.1| DNA (cytosine-5-)-methyltransferase [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|418372731|ref|ZP_12964823.1| Cytosine-specific methyltransferase [Candidatus Arthromitus sp.
SFB-mouse-SU]
gi|342329933|dbj|BAK56575.1| cytosine-specific methyltransferase [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|345506454|gb|EGX28748.1| DNA (cytosine-5-)-methyltransferase [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|346984215|dbj|BAK79891.1| DNA-cytosine methyltransferase [Candidatus Arthromitus sp.
SFB-mouse-Yit]
gi|380331171|gb|EIA22260.1| Cytosine-specific methyltransferase [Candidatus Arthromitus sp.
SFB-1]
gi|380335896|gb|EIA25988.1| Cytosine-specific methyltransferase [Candidatus Arthromitus sp.
SFB-4]
gi|380338564|gb|EIA27441.1| Cytosine-specific methyltransferase [Candidatus Arthromitus sp.
SFB-co]
gi|380342400|gb|EIA30845.1| Cytosine-specific methyltransferase [Candidatus Arthromitus sp.
SFB-mouse-SU]
Length = 297
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQP+++ G + D R F + ++I K P +F+ENV G D + + ++
Sbjct: 88 PCQPFSQAGYKLGFEDIRGTLFFNVADII--RAKKPKAVFLENVRGLLKHD-NGRTFNVI 144
Query: 72 ANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 107
N+ Y I+ FG+P RPR + + R +
Sbjct: 145 ENTLRELCYTVNYKIIKASDFGLPQHRPRIYIICMRSDIK 184
>gi|254779148|ref|YP_003057253.1| type II cytosine specific DNA methyltransferase [Helicobacter
pylori B38]
gi|254001059|emb|CAX29005.1| M. Hpy99XI, type II cytosine specific DNA methyltransferase
[Helicobacter pylori B38]
Length = 348
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 117/313 (37%), Gaps = 47/313 (15%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L++L+L+ P + ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSP 123
++ Y+ + IL+ L +GVP R R + K Q P P
Sbjct: 126 FQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGVLKRFK--------QKFHFPKP 177
Query: 124 LLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDF 183
I H D+ L P++ +GD + G+L +F
Sbjct: 178 ---------IKTHFSLKDA----LGDLPPIQS----GENGDAL----GYLKNADNVFLEF 216
Query: 184 GAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKR-CCCFTKSYYRYVKGTGSL 242
+ + + L+ + + G + D + P+S R +T +Y + +
Sbjct: 217 VRNSKELSEHSSPKNNEKLIKIMQTLKDGQSKDDL-PESLRPKSGYTNTYAKMWWEKPAP 275
Query: 243 LATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIA 302
T + + + R + RE A L SFP D++F S ++ +GN+
Sbjct: 276 TITRNFSTPSSSRCIHPRDSRALSIREGARLQSFPDDYKFCGSASAKR--LQIGNA---- 329
Query: 303 VVAPLLQYLFAQA 315
V PLL AQA
Sbjct: 330 -VPPLLSVALAQA 341
>gi|420453298|ref|ZP_14952137.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-8]
gi|393070906|gb|EJB71695.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-8]
Length = 269
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L+IL+L+ P + ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRILDLV-----KPKIFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
++ Y+ + IL+ L +GVP R R + K
Sbjct: 126 FQRICNAFKERGYILEHAILNALDYGVPQIRERVILVGTLK 166
>gi|308182632|ref|YP_003926759.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori PeCan4]
gi|308064817|gb|ADO06709.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori PeCan4]
Length = 351
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L++L+L+ P M ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKMFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
++ Y+ + IL+ L +GVP R R + K
Sbjct: 126 FKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALK 166
>gi|337292881|emb|CCB90882.1| Modification methylase HpaII [Waddlia chondrophila 2032/99]
Length = 313
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 55/120 (45%), Gaps = 18/120 (15%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF------ETSDTHA 65
PCQP+++ G +K +AR F +I +I + K P F+ENV +T DT
Sbjct: 99 PCQPFSQAGFKKGFDEARGTLFFEIANIIKN--KNPKSFFLENVRHLFAHDNGKTFDTIK 156
Query: 66 K-MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPL 124
K ++E L S Y I+ +G+P RPR F + FR L N P P+
Sbjct: 157 KILVEDLNYSLYYQ---IVKASDYGLPTHRPRLFMVG------FRDDLKENIDFSFPDPI 207
>gi|283783021|ref|YP_003373775.1| DNA (cytosine-5-)-methyltransferase [Gardnerella vaginalis 409-05]
gi|283441534|gb|ADB14000.1| DNA (cytosine-5-)-methyltransferase [Gardnerella vaginalis 409-05]
Length = 357
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSF---LKILELIPHTVKPPHMLFVENVVGFETSDTHA- 65
PPCQ ++++G +K D R F F +K++EL+ P +ENV T++
Sbjct: 76 GPPCQGFSQKGQRKTIYDKRNFLFEYYVKVVELV-----KPKYFVMENVPNLLTAEKGYF 130
Query: 66 -KMIEILANS-DYLTQEFILSPLQFGVPYSRPRYFCLAK 102
IE L N+ Y Q +L+ FGVP +R R + K
Sbjct: 131 FNEIETLFNAMGYFLQHGVLNAADFGVPQNRKRAVIIGK 169
>gi|416406066|ref|ZP_11688038.1| Type II modification methyltransferase HpaII [Crocosphaera watsonii
WH 0003]
gi|357261153|gb|EHJ10455.1| Type II modification methyltransferase HpaII [Crocosphaera watsonii
WH 0003]
Length = 420
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 5/95 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQP++ G + D R F ++ E I KP L +ENV G T D T +I
Sbjct: 74 PCQPFSYAGKHQGFGDTRGTLFFEV-ERILDKYKPDGFL-LENVRGLVTHDKGRTLKTII 131
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 103
L + DY + +L+ F VP +R R + + K+
Sbjct: 132 NKLNDLDYSVEYLLLNSSNFNVPQNRVRIYIVGKK 166
>gi|385231371|ref|YP_005791290.1| DNA-cytosine methyltransferase [Helicobacter pylori 2018]
gi|325995748|gb|ADZ51153.1| DNA-cytosine methyltransferase [Helicobacter pylori 2018]
Length = 160
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGFETSDTHAK 66
L PPCQ Y+ G +K A F +L+IL+L VKP +F ENVVG S +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRILDL----VKPKIFVF-ENVVGL-ISMQKGQ 124
Query: 67 MIEILANS----DYLTQEFILSPLQFGVPYSRPR 96
+ + + N+ Y+ + IL+ L +GVP R R
Sbjct: 125 LFQRICNAFKERGYILEHAILNALDYGVPQVRER 158
>gi|313892290|ref|ZP_07825883.1| modification methylase HpaII [Dialister microaerophilus UPII 345-E]
gi|313119428|gb|EFR42627.1| modification methylase HpaII [Dialister microaerophilus UPII 345-E]
Length = 329
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 6/107 (5%)
Query: 5 HAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD- 62
H LL+ PCQ ++ G +K DAR F + ++ + P ++F ENV D
Sbjct: 67 HNILLAGFPCQAFSLAGQKKGFEDARGTLFFSVAKIAEY--HKPEVIFCENVKNLLNHDK 124
Query: 63 --THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 107
T + IL + Y IL+ FGVP +R R + +A R +S
Sbjct: 125 GRTFKVIKNILVDLGYTVFYKILNSKNFGVPQNRERIYIVAFRNDIS 171
>gi|124024750|ref|YP_001013866.1| site-specific DNA methylase [Prochlorococcus marinus str. NATL1A]
gi|123959818|gb|ABM74601.1| Site-specific DNA methylase [Prochlorococcus marinus str. NATL1A]
Length = 305
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQ +++ GL+K D R F I ++ P +ENV G ++ T ++
Sbjct: 73 PCQAFSQAGLKKGFQDTRGTLFFDIARIL--KFHKPKAFLLENVKHLKGHDSGKTFKTIM 130
Query: 69 EILANSDYLTQEF-ILSPLQFGVPYSRPRYFCLA 101
+L + Y T E+ +L+ FGVP +R R F
Sbjct: 131 NVLRDIGYQTIEYKVLNAKDFGVPQNRERIFIFG 164
>gi|427420225|ref|ZP_18910408.1| DNA-methyltransferase Dcm [Leptolyngbya sp. PCC 7375]
gi|425762938|gb|EKV03791.1| DNA-methyltransferase Dcm [Leptolyngbya sp. PCC 7375]
Length = 338
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFET---SDTHAKMI 68
PC P++ G QK ++D R F L LI T P + +ENV GF ++ +I
Sbjct: 81 PCPPFSIAGQQKGANDERDL-FPDALRLIKQTQ--PKAVILENVRGFSGARFTEYRKYLI 137
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
L + TQ +L +GVP RPR+ +A
Sbjct: 138 RELGQLGFTTQWQVLKASDYGVPQLRPRFILVA 170
>gi|385223522|ref|YP_005783448.1| Type II DNA modification enzyme [Helicobacter pylori 2017]
gi|325997344|gb|ADZ49552.1| Type II DNA modification enzyme [Helicobacter pylori 2017]
Length = 159
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGFETSDTHAK 66
L PPCQ Y+ G +K A F +L+IL+L VKP +F ENVVG S +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRILDL----VKPKIFVF-ENVVGL-ISMQKGQ 124
Query: 67 MIEILANS----DYLTQEFILSPLQFGVPYSRPR 96
+ + + N+ Y+ + IL+ L +GVP R R
Sbjct: 125 LFQRICNAFKERGYILEHAILNALDYGVPQVRER 158
>gi|331677320|ref|ZP_08377999.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli H591]
gi|331075055|gb|EGI46371.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli H591]
Length = 415
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 64/143 (44%), Gaps = 12/143 (8%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQ ++ G Q +D R F ++ +I P + +ENV G + D T + ++
Sbjct: 74 PCQAFSYAGKQLGFADTRGTLFFEVERIIKKN--KPKLCLLENVRGLTSHDKGRTFSTIL 131
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK-RKPLSFRC-QLLNNQLLRSPSPLLG 126
+ L N Y + +L+ FGVP +R R + +A K ++ L + + P G
Sbjct: 132 KSLHNLGYHVEYRLLNTSNFGVPQNRVRIYIIASLEKEVTLTIPNDLGAKDTHNYKPSKG 191
Query: 127 NDDMTVITK-----HDQPDDSWD 144
D +K D PD+S+D
Sbjct: 192 GHDFYTESKVSDILEDSPDESYD 214
>gi|218902126|ref|YP_002449960.1| cytosine-specific methyltransferase [Bacillus cereus AH820]
gi|218538919|gb|ACK91317.1| cytosine-specific methyltransferase NlaX [Bacillus cereus AH820]
Length = 350
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 22/143 (15%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIP-----HTVKPPHMLF--VENVVGFETSDTH 64
PCQ ++ G +K D R F +IL++I + KP ++ V+N+ G + +T
Sbjct: 75 PCQAFSIAGYRKGFEDERGNMFFQILDVIDAQEKMYGTKPKAIMLENVKNLKGHDKGNTF 134
Query: 65 AKMIEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLAKRKPLSFRCQLLNNQLLRS--- 120
+ E L Y ++ +L+ +++G VP +R R + + L N+L
Sbjct: 135 RVIKECLEEKGYTIKDKVLNSMEYGNVPQNRERIYIVG----------FLENELTAKFDF 184
Query: 121 PSPL-LGNDDMTVITKHDQPDDS 142
P+P+ L N TVI ++ +D
Sbjct: 185 PAPIPLTNTLNTVINRNSSINDE 207
>gi|336402481|ref|ZP_08583217.1| hypothetical protein HMPREF0127_00530 [Bacteroides sp. 1_1_30]
gi|335948648|gb|EGN10351.1| hypothetical protein HMPREF0127_00530 [Bacteroides sp. 1_1_30]
Length = 371
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 56/121 (46%), Gaps = 4/121 (3%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTH--AKMIE 69
PCQ Y+ K S+ E + + P +FVENV G + + + E
Sbjct: 106 PCQYYSNIKTDKSKSEKTRLLLQDFQEFVDYY--RPGYIFVENVPGLDHNPQSPLGQFKE 163
Query: 70 ILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGNDD 129
L+ ++Y+ E +++ +GVP +R RY +A R R + N + +R+ +GN +
Sbjct: 164 YLSENNYVYDERVVNAKYYGVPQNRRRYVLIATRVVPEIRLPIENKKNIRTVREAIGNYN 223
Query: 130 M 130
+
Sbjct: 224 I 224
>gi|225375779|ref|ZP_03753000.1| hypothetical protein ROSEINA2194_01411 [Roseburia inulinivorans DSM
16841]
gi|225212376|gb|EEG94730.1| hypothetical protein ROSEINA2194_01411 [Roseburia inulinivorans DSM
16841]
Length = 431
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQ ++ G ++ +DAR F +I L+ K P +ENV G + D T ++
Sbjct: 78 PCQAFSIAGKREGFADARGTLFFEIARLLK--AKRPQYFILENVPGLLSHDKGRTFCTIL 135
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRC 110
L+ Y + +L+ FGVP +R R + + FRC
Sbjct: 136 STLSQLGYHVEWKVLNSKDFGVPQARKRVYIVGY---FDFRC 174
>gi|262280408|ref|ZP_06058192.1| DNA cytosine methyltransferase [Acinetobacter calcoaceticus
RUH2202]
gi|262258186|gb|EEY76920.1| DNA cytosine methyltransferase [Acinetobacter calcoaceticus
RUH2202]
Length = 354
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 7/97 (7%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDT-----HAK 66
PCQP++ Q K D R + I P +F+ENV G + D + +
Sbjct: 81 PCQPFSSQNKAKSEDDIRRTLLDETHRFINEL--QPDYIFIENVPGLQNIDKDKEGPYKR 138
Query: 67 MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 103
I+ L +Y EFI ++GVP R R+ LA +
Sbjct: 139 FIQFLNMQNYKFIEFIAKSEEYGVPQRRKRFVLLASK 175
>gi|418962312|ref|ZP_13514179.1| DNA (cytosine-5-)-methyltransferase [Streptococcus anginosus subsp.
whileyi CCUG 39159]
gi|383345960|gb|EID24044.1| DNA (cytosine-5-)-methyltransferase [Streptococcus anginosus subsp.
whileyi CCUG 39159]
Length = 325
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 52/123 (42%), Gaps = 6/123 (4%)
Query: 12 PCQPYTRQGLQK---QSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMI 68
PCQ ++R GL+K + S R+ + + +I P ++ ENV G + A
Sbjct: 84 PCQDFSRSGLKKGGTKGSGTRSSLLFETIRIIEEMKIRPKIVLWENVKGVLDKNMRASFF 143
Query: 69 EILANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLL 125
L + L E IL+ ++FG+P R R F ++ SF L R S L
Sbjct: 144 HYLKEMERLGYENKYEILNAIEFGIPQKRERIFVVSILGNNSFDFAKLEKTQTRDISEFL 203
Query: 126 GND 128
D
Sbjct: 204 EKD 206
>gi|385229774|ref|YP_005789690.1| type II DNA modification methyltransferase [Helicobacter pylori
Puno135]
gi|344336212|gb|AEN18173.1| type II DNA modification methyltransferase [Helicobacter pylori
Puno135]
Length = 351
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L++L+L+ P M ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKMFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
++ Y+ + IL+ L +GVP R R + K
Sbjct: 126 FKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALK 166
>gi|313667524|ref|YP_004047808.1| cytosine-specific methyltransferase [Neisseria lactamica 020-06]
gi|422111278|ref|ZP_16380944.1| DNA cytosine methyltransferase M.NlaX [Neisseria lactamica
Y92-1009]
gi|309378245|emb|CBX23130.1| DNA cytosine methyltransferase M.NlaX [Neisseria lactamica
Y92-1009]
gi|313004986|emb|CBN86414.1| cytosine-specific methyltransferase [Neisseria lactamica 020-06]
Length = 313
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 6/101 (5%)
Query: 5 HAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDT 63
H LL+ PCQP+++ GL+K +D R F I ++ K P +ENV + D
Sbjct: 65 HDILLAGFPCQPFSQAGLKKGFADTRGTLFFDIERIL--LAKKPQAFLLENVKQLKGHDK 122
Query: 64 HAKMIEILAN---SDYLTQEFILSPLQFGVPYSRPRYFCLA 101
+ ILA+ + Y +L FG+P +R R + +
Sbjct: 123 GRTLQVILAHLQQAGYKVYTEVLKARDFGIPQNRERIYLVG 163
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 263 RYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFA 313
R TPRE A L FP FQ P +S Q Y GNS+ + V+ + + + A
Sbjct: 255 RKITPREAARLQGFPDSFQIP--VSDAQAYRQFGNSVCVPVIRAIAEQMKA 303
>gi|261400948|ref|ZP_05987073.1| modification methylase EcoRII [Neisseria lactamica ATCC 23970]
gi|269209191|gb|EEZ75646.1| modification methylase EcoRII [Neisseria lactamica ATCC 23970]
Length = 313
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 6/101 (5%)
Query: 5 HAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDT 63
H LL+ PCQP+++ GL+K +D R F I ++ K P +ENV + D
Sbjct: 65 HDILLAGFPCQPFSQAGLKKGFADTRGTLFFDIERIL--LAKKPQAFLLENVKQLKGHDK 122
Query: 64 HAKMIEILAN---SDYLTQEFILSPLQFGVPYSRPRYFCLA 101
+ ILA+ + Y +L FG+P +R R + +
Sbjct: 123 GRTLQVILAHLQQAGYKVYTEVLKARDFGIPQNRERIYLVG 163
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 263 RYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFA 313
R TPRE A L FP FQ P +S Q Y GNS+ + V+ + + + A
Sbjct: 255 RKITPREAARLQGFPDSFQIP--VSDAQAYRQFGNSVCVPVIRAIAEQMKA 303
>gi|420413430|ref|ZP_14912554.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4099]
gi|393029417|gb|EJB30498.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4099]
Length = 351
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGFETSDTHAK 66
L PPCQ Y+ G +K A F +L++L+L+ P M ENVVG S +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKMFVFENVVGL-MSMQKGQ 124
Query: 67 MIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
+ + + N+ Y+ + IL+ L +GVP R R + K
Sbjct: 125 LFQQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALK 166
>gi|298253558|ref|ZP_06977348.1| site-specific DNA methylase [Gardnerella vaginalis 5-1]
gi|297532325|gb|EFH71213.1| site-specific DNA methylase [Gardnerella vaginalis 5-1]
Length = 317
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSF---LKILELIPHTVKPPHMLFVENVVGFETSDTHA- 65
PPCQ ++++G +K D R F F +K++EL+ P +ENV T++
Sbjct: 36 GPPCQGFSQKGQRKTIYDKRNFLFEYYVKVVELV-----KPKYFVMENVPNLLTAEKGYF 90
Query: 66 -KMIEILANS-DYLTQEFILSPLQFGVPYSRPRYFCLAK 102
IE L N+ Y Q +L+ FGVP +R R + K
Sbjct: 91 FNEIETLFNAMGYFLQHGVLNAADFGVPQNRKRAVIIGK 129
>gi|296126993|ref|YP_003634245.1| DNA-cytosine methyltransferase [Brachyspira murdochii DSM 12563]
gi|296018809|gb|ADG72046.1| DNA-cytosine methyltransferase [Brachyspira murdochii DSM 12563]
Length = 324
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Query: 4 AHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPH-TVKPPHMLFVENVVGFETS 61
AH L + PCQ ++ G QK D R F I ++ H K M V+N+V +
Sbjct: 71 AHDILCAGFPCQAFSISGKQKGFEDKRGNLFFDIARILKHQKTKVVFMENVKNLVRHDNG 130
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 109
T +I+I+ Y +L+ +G+P R R + + RK L+ +
Sbjct: 131 RTLNTIIKIMNELGYDFYYKVLNASDYGIPQKRERIYIVCFRKDLNIK 178
>gi|420455009|ref|ZP_14953839.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-14]
gi|393073359|gb|EJB74133.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-14]
Length = 348
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGFETSDTHAK 66
L PPCQ Y+ G +K A F +L++L+L+ P M ENVVG S +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKMFVFENVVGL-MSMQKGQ 124
Query: 67 MIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
+ + + N+ Y+ + IL+ L +GVP R R + K
Sbjct: 125 LFQQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALK 166
>gi|381179820|ref|ZP_09888667.1| DNA-cytosine methyltransferase [Treponema saccharophilum DSM 2985]
gi|380768298|gb|EIC02290.1| DNA-cytosine methyltransferase [Treponema saccharophilum DSM 2985]
Length = 361
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 107/314 (34%), Gaps = 50/314 (15%)
Query: 12 PCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMI 68
PCQP++ G Q SD R F KIL++ + + +ENV T D
Sbjct: 82 PCQPFSMMGEQLGFSDTRGTMFFEIEKILKIKKEQGEQIPFVVLENVRNLYTHDKGNTFK 141
Query: 69 EILANSDYLTQEF---ILSPLQFGVPYSRPRY--FCLAKRKPLSFRCQLLNNQLLRSPSP 123
I A+ + L F I + F + R R F K P F N + +
Sbjct: 142 TIKAHLENLGYHFFSSIFNTENFALAQKRNRIIIFATTKNIPNGFDFSAENIKQVFDAHI 201
Query: 124 LLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDF 183
D+M I K D +LE P + FL + LS GTA
Sbjct: 202 ----DEMKSIYKQQTTLD----VLEKEVPAKYFL-------SEKIKPTILSNGTAGFKSN 246
Query: 184 GAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLL 243
C ++ R C ++ +
Sbjct: 247 SKINLLTARPLCATMHKM---------------------HRACQDNYFSQEFISSENPIA 285
Query: 244 ATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDF-QFPHHLSLRQR--YALLGNSLS 300
Q K + ++ H+R TP E NL FP +F + PH L + Y GN++S
Sbjct: 286 YLKQKYTKEEEAT---HHIRKLTPEEAFNLQGFPKEFCKKPHELKMSDGALYKQAGNAVS 342
Query: 301 IAVVAPLLQYLFAQ 314
+ V+ ++ YLF
Sbjct: 343 VNVIYAIMYYLFVN 356
>gi|385228214|ref|YP_005788147.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Puno120]
gi|344334652|gb|AEN15096.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Puno120]
Length = 351
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L++L+L+ P M ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKMFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
++ Y+ + IL+ L +GVP R R + K
Sbjct: 126 FKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALK 166
>gi|325270632|ref|ZP_08137230.1| DNA (cytosine-5-)-methyltransferase [Prevotella multiformis DSM
16608]
gi|324987027|gb|EGC19012.1| DNA (cytosine-5-)-methyltransferase [Prevotella multiformis DSM
16608]
Length = 283
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 11/88 (12%)
Query: 230 KSYYRYVKG--TGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLS 287
K Y R+ G G++ A+ QP+N G ++ R +T RE+A + SFP ++ F +
Sbjct: 193 KFYRRFALGEINGTITASAQPENCGITHPIEN---RRYTVREIARIQSFPDNYHF-DSIP 248
Query: 288 LRQRYALLGNSLSIAVVAPLLQYLFAQA 315
L+ RY ++GN+ V P+L ++ A A
Sbjct: 249 LQSRYKVIGNA-----VPPVLGWVIASA 271
>gi|289423000|ref|ZP_06424820.1| modification methylase ScrFIB [Peptostreptococcus anaerobius 653-L]
gi|289156574|gb|EFD05219.1| modification methylase ScrFIB [Peptostreptococcus anaerobius 653-L]
Length = 329
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 52/123 (42%), Gaps = 6/123 (4%)
Query: 12 PCQPYTRQGLQK---QSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMI 68
PCQ ++R GL+K + S R+ + + +I P ++ ENV G + A
Sbjct: 88 PCQDFSRSGLKKGGTKGSGTRSSLLFETIRIIEEMKIRPKIVLWENVKGVLDKNMRASFF 147
Query: 69 EILANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLL 125
L + L E IL+ ++FG+P R R F ++ SF L R S L
Sbjct: 148 HYLKEMERLGYENKYEILNAIEFGIPQKRERIFVVSILGNNSFDFAKLEKTQTRDISEFL 207
Query: 126 GND 128
D
Sbjct: 208 EKD 210
>gi|229126345|ref|ZP_04255362.1| Cytosine-specific methyltransferase [Bacillus cereus BDRD-Cer4]
gi|228657116|gb|EEL12937.1| Cytosine-specific methyltransferase [Bacillus cereus BDRD-Cer4]
Length = 363
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 123/314 (39%), Gaps = 77/314 (24%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDT------HA 65
PCQP++ G +K D R F + + +I K P ++ ENV G T+
Sbjct: 76 PCQPFSSAGNRKGVMDERGTLFEECIRVI--KAKKPLVVLFENVRGILTTKNLDGSLLLD 133
Query: 66 KMIEILANSD--YLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSP 123
++ IL D Y + +L +GVP R R +A RK L + P P
Sbjct: 134 SIVSILDELDPGYNVEYKLLKASDYGVPQQRYRVIFVAFRKDLDVNYKF--------PLP 185
Query: 124 LLGNDDMTVITKH------DQP--DDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLST 175
+ D ++ H + P D+ W + P Q N ++
Sbjct: 186 TYDSSDPSLTVGHAINIPLNTPNQDEVW-----TLSP------------QSNKLIPYIKE 228
Query: 176 GTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRY 235
G + +I + ++P ER D + R F + + R
Sbjct: 229 GGS----------------WKNIPYEILP----ERLKKIRDDI--KRYRAPNFYRRFARN 266
Query: 236 -VKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYAL 294
+ GT + AT P+N G L++ R ++ RE+A + SFP DF F S++ +Y +
Sbjct: 267 EINGTITAAAT--PENCGIIHPLED---RRYSVREIARIQSFPDDFIFVGE-SIQAKYRV 320
Query: 295 LGNSLSIAVVAPLL 308
+GN+ V PLL
Sbjct: 321 IGNA-----VPPLL 329
>gi|420456726|ref|ZP_14955547.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-16]
gi|393075357|gb|EJB76112.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-16]
Length = 351
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGFETSDTHAK 66
L PPCQ Y+ G +K A F +L++L+L+ P M ENVVG S +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKMFVFENVVGL-MSMQKGQ 124
Query: 67 MIEILANS----DYLTQEFILSPLQFGVPYSRPR 96
+ + + N+ Y+ + IL+ L +GVP R R
Sbjct: 125 LFQQICNAFKERGYILEHAILNALDYGVPQIRER 158
>gi|119511510|ref|ZP_01630619.1| type II DNA modification enzyme (methyltransferase) [Nodularia
spumigena CCY9414]
gi|119463821|gb|EAW44749.1| type II DNA modification enzyme (methyltransferase) [Nodularia
spumigena CCY9414]
Length = 371
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 3 GAHAWLLSPPCQPYTRQGLQKQSSDAR-AF-SFLKILELIPHTVKPPHMLFVENVVG--F 58
GA + PPCQP++ G Q D+R F +F+ +E P + ENV G F
Sbjct: 83 GAAVIIGGPPCQPFSVSGHQLGLKDSRDGFPTFISAVERYR-----PQIALFENVRGMLF 137
Query: 59 ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 103
+++ L Y+ + IL+ +GVP R R FC+A +
Sbjct: 138 RNKKYFEEIVLALQEIGYIVEWEILNAAHYGVPQKRERLFCVAHK 182
>gi|336063775|ref|YP_004558634.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pasteurianus
ATCC 43144]
gi|334281975|dbj|BAK29548.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pasteurianus
ATCC 43144]
Length = 394
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 17/107 (15%)
Query: 10 SPPCQPYTRQGLQKQSSDAR---AFSFLKILELIPHTVKPPHMLFVENVVGF-------- 58
PPCQ ++ G +++++D R S++ ++LI P MLF ENV GF
Sbjct: 86 GPPCQGFSMAG-KRKNNDVRNQLMHSYVNFVKLIQ-----PEMLFFENVQGFTVDFKIND 139
Query: 59 ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKP 105
+ + + ++E L + Y+ ++ FGVP +R R+ A + P
Sbjct: 140 KIKNYSSILVENLESLGYIVNFQMIKMSDFGVPQNRKRFILFASKNP 186
>gi|408410143|ref|ZP_11181386.1| Cytosine-specific methyltransferase [Lactobacillus sp. 66c]
gi|407875697|emb|CCK83192.1| Cytosine-specific methyltransferase [Lactobacillus sp. 66c]
Length = 405
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQ ++ G +K D R F ++L++I K P ++FVENV T D T +
Sbjct: 82 PCQAFSIAGYRKGFEDERGDLFFELLKMI--KAKKPRVVFVENVKNLVTHDHGNTFKVIR 139
Query: 69 EILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 101
E LA + Y + +L+ +G VP +R R + +
Sbjct: 140 EALAENGYFIKWKVLNSKDYGNVPQNRERIYMVG 173
>gi|30019096|ref|NP_830727.1| Type II restriction-modification system methylation subunit
[Bacillus cereus ATCC 14579]
gi|29894639|gb|AAP07928.1| Type II restriction-modification system methylation subunit
[Bacillus cereus ATCC 14579]
Length = 373
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 122/314 (38%), Gaps = 77/314 (24%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDT------HA 65
PCQP++ G +K D R F + + +I K P ++ ENV G T+
Sbjct: 86 PCQPFSSAGNRKGVMDERGTLFEECIRVI--KAKKPLVVLFENVRGILTTKNLDGSLLLD 143
Query: 66 KMIEILANSD--YLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSP 123
++ IL D Y + +L +GVP R R +A RK L + P P
Sbjct: 144 SIVSILDELDPGYNVEYKLLKASDYGVPQQRYRVIFVAFRKDLDVNYKF--------PLP 195
Query: 124 LLGNDDMTVITKH------DQP--DDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLST 175
+ D ++ H + P D+ W + P Q N ++
Sbjct: 196 TYDSSDPSLTVGHAINIPLNTPNQDEVW-----TLSP------------QSNKLIPYIKE 238
Query: 176 GTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRY 235
G + +I + ++P ER D + R F + + R
Sbjct: 239 GGS----------------WKNIPYEILP----ERLKKIRDDI--KRYRAPNFYRRFARN 276
Query: 236 -VKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYAL 294
+ GT + A P+N G L++ R ++ RE+A + SFP DF F S++ +Y +
Sbjct: 277 EINGT--ITAAATPENCGIIHPLED---RRYSVREIARIQSFPDDFIFVGE-SIQAKYRV 330
Query: 295 LGNSLSIAVVAPLL 308
+GN+ V PLL
Sbjct: 331 IGNA-----VPPLL 339
>gi|420412053|ref|ZP_14911182.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4228]
gi|420416683|ref|ZP_14915792.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4044]
gi|393027711|gb|EJB28799.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4228]
gi|393037112|gb|EJB38150.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4044]
Length = 351
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L+IL+L+ P + ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRILDLV-----KPKIFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
++ Y+ + IL+ L +GVP R R + K
Sbjct: 126 FQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGALK 166
>gi|386755513|ref|YP_006228730.1| type II DNA modification (methyltransferase) [Helicobacter pylori
PeCan18]
gi|384561771|gb|AFI02237.1| type II DNA modification (methyltransferase) [Helicobacter pylori
PeCan18]
Length = 351
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L+IL+L+ P + ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRILDLV-----KPKIFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
++ Y+ + IL+ L +GVP R R + K
Sbjct: 126 FQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGALK 166
>gi|50914506|ref|YP_060478.1| Type II restriction-modification system methylation subunit
[Streptococcus pyogenes MGAS10394]
gi|40218542|gb|AAR83196.1| type II modification methylase [Streptococcus pyogenes]
gi|50261587|gb|AAT72355.1| methylase [Streptococcus pyogenes]
gi|50903580|gb|AAT87295.1| Type II restriction-modification system methylation subunit
[Streptococcus pyogenes MGAS10394]
gi|114386439|gb|ABI74454.1| DNA methyltransferase [Streptococcus pyogenes]
Length = 408
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 58/143 (40%), Gaps = 18/143 (12%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQ +++ G + D R F + +I K P +ENV +T D T+ +I
Sbjct: 170 PCQAFSQAGKRLGFEDTRGTLFFDVARIIK--AKRPKAFLLENVKNLKTHDKGKTYKIII 227
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNN-QLLRSPSPL--- 124
L N Y T + FGVP +R R + + F +NN R P P
Sbjct: 228 STLENLGYSTSTVLFKARDFGVPQNRERIYIVG------FDKTCVNNFSEFRFPEPFHLE 281
Query: 125 --LGNDDMT-VITKHDQPDDSWD 144
LGN T V K+ D W+
Sbjct: 282 TKLGNILQTDVDEKYTISDKLWE 304
>gi|421718028|ref|ZP_16157329.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R038b]
gi|407222820|gb|EKE92618.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R038b]
Length = 168
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAF-SFLKILELIPHTVKPPHMLFVENVVGFETSDTHAK 66
L PPCQ Y+ G +K A F +L+IL+L+ P + ENVVG S +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRILDLV-----KPKIFVFENVVGL-MSMQKGQ 124
Query: 67 MIEILANS----DYLTQEFILSPLQFGVPYSRPR 96
+ + + N+ Y+ + IL+ L +GVP R R
Sbjct: 125 LFQRICNAFKERGYILEHAILNALDYGVPQIRER 158
>gi|420519255|ref|ZP_15017699.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp H-5b]
gi|393128347|gb|EJC28791.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp H-5b]
Length = 351
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L+IL+L+ P + ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRILDLV-----KPKIFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
++ Y+ + IL+ L +GVP R R + K
Sbjct: 126 FQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGALK 166
>gi|341819908|emb|CCC56122.1| DNA (cytosine-5-)-methyltransferase [Weissella thailandensis
fsh4-2]
Length = 357
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 16/127 (12%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIE 69
PPCQ ++ +G + D R F FL+ LE++ P + +ENV T+ + E
Sbjct: 79 GPPCQGFSNKGKKLGLDDPRNFLFLEYLEMVNRL--QPEVFVIENVKAMLTAVNGYFIKE 136
Query: 70 ILANSD---YLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLG 126
I+ + Y ILS +GVP +R R +A + ++ ++ P P +G
Sbjct: 137 IVDRINALGYKVNYSILSASNYGVPQNRQRAIIIAAK-----------DKKIKMPVPTVG 185
Query: 127 NDDMTVI 133
++ T +
Sbjct: 186 INNKTTV 192
>gi|428778955|ref|YP_007170741.1| DNA-methyltransferase Dcm [Dactylococcopsis salina PCC 8305]
gi|428693234|gb|AFZ49384.1| DNA-methyltransferase Dcm [Dactylococcopsis salina PCC 8305]
Length = 333
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 7/102 (6%)
Query: 12 PCQPYTRQGLQKQSSD-ARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKM 67
PCQP++ G +K D R F ILE+I K P ++F+ENV + D T+ M
Sbjct: 91 PCQPFSIAGYRKGLKDQGRGDLFFTILEIIRR--KKPAVIFLENVKNLLSHDQGKTYNYM 148
Query: 68 IEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLAKRKPLSF 108
+++ Y E +L+ + +G +P +R R + L + +++
Sbjct: 149 KTLISEEGYYVTEKVLNTMTYGNLPQNRERLYILGFKSKIAY 190
Score = 44.3 bits (103), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%)
Query: 259 EQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQ 314
E+ +R TP E L FP +F FP LS +Y +GN++S++VV + Q + Q
Sbjct: 275 EKGIRKLTPLECLRLQGFPKEFTFPETLSRGNQYKQVGNAVSVSVVKSIAQQIKLQ 330
>gi|113478034|ref|YP_724095.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101]
gi|110169082|gb|ABG53622.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101]
Length = 413
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 12 PCQPYTRQGLQKQSSDA-RAFSFLKILELIPHTVKPPHMLFVENVVGFETSDT--HAKMI 68
PCQP+++ G + D R F +I+E+I K P +ENV T + H ++I
Sbjct: 99 PCQPFSQAGKKMGIRDRLRGTLFERIIEII--QAKKPKYFLLENVKRILTMEKGYHFRII 156
Query: 69 -EILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
LA+ DY + I++P+ F +P +R R F
Sbjct: 157 LNALASLDYFIEWRIINPINFSIPQNRDRIFIFG 190
>gi|15611502|ref|NP_223153.1| type II DNA modification (methyltransferase [Helicobacter pylori
J99]
gi|4154963|gb|AAD06007.1| TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE) [Helicobacter
pylori J99]
Length = 351
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L+IL+L+ P + ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRILDLV-----KPKIFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
++ Y+ + IL+ L +GVP R R + K
Sbjct: 126 FQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGALK 166
>gi|78777762|ref|YP_394077.1| DNA (cytosine-5-)-methyltransferase [Sulfurimonas denitrificans DSM
1251]
gi|78498302|gb|ABB44842.1| DNA (cytosine-5-)-methyltransferase [Sulfurimonas denitrificans DSM
1251]
Length = 328
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 5/97 (5%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTH 64
L PCQ ++ G +K D R F ++ + + P ++F+ENV VG + T
Sbjct: 87 LAGFPCQAFSVAGHRKGFEDTRGTLFFDVMRIAAY--HKPKVIFLENVKGLVGHDKGKTF 144
Query: 65 AKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
++E L Y + IL+ +GVP +R R + +
Sbjct: 145 KVILETLKELGYYVEYQILNAKDYGVPQNRERIYIVG 181
>gi|419418098|ref|ZP_13958451.1| type II DNA modification enzyme [Helicobacter pylori NCTC 11637 =
CCUG 17874]
gi|384374751|gb|EIE30122.1| type II DNA modification enzyme [Helicobacter pylori NCTC 11637 =
CCUG 17874]
Length = 348
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L++L+L+ P M ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKMFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
++ Y+ + IL+ L +GVP R R + K
Sbjct: 126 FKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALK 166
>gi|254475144|ref|ZP_05088530.1| DNA-cytosine methyltransferase [Ruegeria sp. R11]
gi|214029387|gb|EEB70222.1| DNA-cytosine methyltransferase [Ruegeria sp. R11]
Length = 324
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 6/99 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS---DTHAKMI 68
PC P++ G Q D R F +E++ T P + +ENV GF + D K+
Sbjct: 74 PCPPFSVAGKQLGEKDERNL-FDDAIEIVAATR--PRAVMIENVRGFLDAVFHDYREKLK 130
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 107
+ LA Y T +L+ +GVP RPR +A RK S
Sbjct: 131 KQLAKLGYETDWRLLNASDYGVPQLRPRVAIVALRKEFS 169
>gi|384210135|ref|YP_005595855.1| DNA-cytosine methyltransferase [Brachyspira intermedia PWS/A]
gi|343387785|gb|AEM23275.1| DNA-cytosine methyltransferase [Brachyspira intermedia PWS/A]
Length = 323
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 60/136 (44%), Gaps = 11/136 (8%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQP++ G +K D R F I +I + P + +ENV E D T +I
Sbjct: 69 PCQPFSVAGYRKGFEDVRGTLFFDIARIIKY--HRPKAVLLENVKNLENHDNGNTLKTII 126
Query: 69 EILANSDYLTQEFILSPLQF-GVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGN 127
+L + +Y IL+ ++ +P +R R F +A K +LN + P P+
Sbjct: 127 NVLQDLNYYVCYKILNSAEYSNIPQNRERIFIVAFNKD-----TVLNYSYFKFPEPVELT 181
Query: 128 DDMTVITKHDQPDDSW 143
+ + ++ DD +
Sbjct: 182 NTIHDFIDQEKQDDVF 197
>gi|384894068|ref|YP_005768117.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Sat464]
gi|308063322|gb|ADO05209.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Sat464]
Length = 348
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 117/312 (37%), Gaps = 45/312 (14%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L++L+L+ P M ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKMFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSP 123
++ Y+ + IL+ L +GVP R R + K SF+ Q P P
Sbjct: 126 FKQICNAFKERGYVLEHAILNALDYGVPQIRERVILVGVLK--SFK------QKFHFPKP 177
Query: 124 LLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDF 183
I H D+ L P++ +GD + G+L +F
Sbjct: 178 ---------IKTHFSLKDA----LGDLPPIQS----GENGDAL----GYLKNADNVFLEF 216
Query: 184 GAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLL 243
+ + + L+ + + G + D + + + +T +Y + +
Sbjct: 217 VRNSKELSEHSSPKNNEKLIKIMQTLKDGQSKDDLPKNLRPKSGYTNTYAKMWWEKPAPT 276
Query: 244 ATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAV 303
T + + + R + RE A L SFP +++F S ++ +GN+
Sbjct: 277 ITRNFSTPSSSRCIHPRDSRALSVREGARLQSFPDNYKFCGSTSAKR--LQIGNA----- 329
Query: 304 VAPLLQYLFAQA 315
V PLL A A
Sbjct: 330 VPPLLSVALAHA 341
>gi|385249008|ref|YP_005777227.1| Type II DNA modification enzyme [Helicobacter pylori F57]
gi|317181803|dbj|BAJ59587.1| Type II DNA modification enzyme [Helicobacter pylori F57]
Length = 351
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 117/312 (37%), Gaps = 45/312 (14%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L++L+L+ P M ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKMFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSP 123
++ Y+ + IL+ L +GVP R R + K SF+ Q P P
Sbjct: 126 FKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGVLK--SFK------QKFHFPKP 177
Query: 124 LLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDF 183
I H D+ L P++ +GD + G+L +F
Sbjct: 178 ---------IKTHFSLKDA----LGDLPPIQS----GENGDAL----GYLKNADNVFLEF 216
Query: 184 GAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLL 243
+ + + L+ + + G + D + + + +T +Y + +
Sbjct: 217 VRNSKELSEHSSPKNNEKLIKIMQTLKDGQSKDDLPKNLRPKSGYTNTYAKMWWEKPAPT 276
Query: 244 ATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAV 303
T + + + R + RE A L SFP +++F S ++ +GN+
Sbjct: 277 ITRNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFCGSASAKR--LQIGNA----- 329
Query: 304 VAPLLQYLFAQA 315
V PLL A A
Sbjct: 330 VPPLLSAALAHA 341
>gi|254467362|ref|ZP_05080773.1| DNA-cytosine methyltransferase [Rhodobacterales bacterium Y4I]
gi|206688270|gb|EDZ48752.1| DNA-cytosine methyltransferase [Rhodobacterales bacterium Y4I]
Length = 319
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 6/99 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS---DTHAKMI 68
PC P++ G Q D R F +E++ T P + +ENV GF + D K+
Sbjct: 74 PCPPFSVAGKQLGEKDERNL-FDDAIEIVDATR--PRAVMIENVRGFLDAVFHDYREKLK 130
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 107
+ L+ Y T +L+ FGVP RPR +A RK S
Sbjct: 131 KQLSKLGYETDWRLLNASDFGVPQLRPRVAIVALRKEFS 169
>gi|397904752|ref|ZP_10505647.1| DNA-cytosine methyltransferase( EC:2.1.1.37 ) [Caloramator
australicus RC3]
gi|397162204|emb|CCJ32981.1| DNA-cytosine methyltransferase [Caloramator australicus RC3]
Length = 338
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G Q+ D+R F I ++ K P ++F+ENV F + D + +
Sbjct: 80 PCQAFSISGKQRGFEDSRGTLFFDIARIV--KAKKPKIVFMENVKNFASHDNGKTLSVVK 137
Query: 72 ANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRKPLSFR 109
+ + L F +L+ +G+P R R + + R L+ +
Sbjct: 138 SIMEELGYTFYYKVLNAADYGIPQKRERIYMVCFRNDLAIK 178
>gi|420443465|ref|ZP_14942393.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-41]
gi|393060972|gb|EJB61841.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-41]
Length = 165
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 12/101 (11%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGFETSDTHAK 66
L PPCQ Y+ G +K A F +L+IL+L VKP +F ENVVG S +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRILDL----VKPKIFVF-ENVVGL-MSMQKGQ 124
Query: 67 MIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKR 103
+ + + N+ Y+ + IL+ L +GVP R R L++R
Sbjct: 125 LFQRICNAFKERGYILEHAILNTLDYGVPQIRERVI-LSRR 164
>gi|430375877|ref|ZP_19430280.1| DNA-cytosine methyltransferase [Moraxella macacae 0408225]
gi|429541108|gb|ELA09136.1| DNA-cytosine methyltransferase [Moraxella macacae 0408225]
Length = 349
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
Query: 5 HAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF---ETS 61
H PCQ ++ G Q+ D R F +I ++ H P ++ +ENV F
Sbjct: 67 HILCAGFPCQAFSISGKQQGFDDVRGTLFFEIARIVKH--HQPKLILLENVKNFIKHNNQ 124
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 106
+T +++IL +Y +L+ FG+P +R R + + RK +
Sbjct: 125 NTLKTVLKILDELNYQVFYQVLNASDFGLPQNRERVYFVCFRKDI 169
>gi|420463458|ref|ZP_14962236.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-4]
gi|393080986|gb|EJB81711.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-4]
Length = 160
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAF-SFLKILELIPHTVKPPHMLFVENVVGFETSDTHAK 66
L PPCQ Y+ G +K A F +L+IL+L VKP +F ENVVG S +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRILDL----VKPKIFVF-ENVVGL-MSMQKGQ 124
Query: 67 MIEILANS----DYLTQEFILSPLQFGVPYSRPR 96
+ + + N+ Y+ + IL+ L +GVP R R
Sbjct: 125 LFQQICNAFKERGYILEHAILNALDYGVPQIRER 158
>gi|420423359|ref|ZP_14922432.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-4]
gi|393042639|gb|EJB43648.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-4]
Length = 351
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L+IL+L+ P + ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRILDLV-----KPKIFVFENVVGLISMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
++ Y+ + IL+ L +GVP R R + K
Sbjct: 126 FQRICNAFKERGYILEHAILNALDYGVPQIRERVILVGALK 166
>gi|186686332|ref|YP_001869528.1| DNA-cytosine methyltransferase [Nostoc punctiforme PCC 73102]
gi|186468784|gb|ACC84585.1| DNA-cytosine methyltransferase [Nostoc punctiforme PCC 73102]
Length = 331
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIE 69
PPCQ ++ G + ++ S + E++ + P +ENV F S+ + ++ +
Sbjct: 85 GPPCQDFSSAGKRDENLGRGDLSIV-FSEIVTSVL--PQWFLIENVDLFRKSNKYKEVKQ 141
Query: 70 ILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK 102
I N+ Y E IL GVP R R+FC +
Sbjct: 142 IFKNTGYGLSEIILDASLCGVPQKRKRFFCFGE 174
>gi|156936516|ref|YP_001440431.1| hypothetical protein ESA_pESA2p06562 [Cronobacter sakazakii ATCC
BAA-894]
gi|156534770|gb|ABU79595.1| hypothetical protein ESA_pESA2p06562 [Cronobacter sakazakii ATCC
BAA-894]
Length = 415
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 122/320 (38%), Gaps = 42/320 (13%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAK 66
PPCQ ++ ++ + D+R F + L + P + +ENV V FE T
Sbjct: 92 GPPCQGFSINAPKRSTEDSRNHLFREYLRFVSEF--QPRAVLIENVPGMVSFEGGATLDA 149
Query: 67 MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSP----- 121
++E L N Y IL +G+P +R R L R L+ +L L ++P
Sbjct: 150 ILESLKNLGYEADVRILYAPHYGIPQTRWRTIILGCRDGLN-PTELFPEPLRQAPVRVNF 208
Query: 122 SPLLGNDDMT------VITKHDQPDDSWDKLLESCDPV--ERFLEFSNSGDQVNTETGFL 173
+ G ++ + H D+ L C+ E+ + +S D N +
Sbjct: 209 TSQFGGKNLVNLPISLELPSHVTVRDAIGDLPSLCNGEIGEQVKSYRHSAD--NQYQKLM 266
Query: 174 STGTAAVDDFGAAE-ETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSY 232
G+ V AA + ++R I W + D + P R +
Sbjct: 267 RIGSDGVTCHEAARLSKINLERMAHIPQG-------GNWTNIPDELLPRGMRMARRSDHT 319
Query: 233 YRYVK----GTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSL 288
RY + G S + T + G + + R FT RE A L SFP + F S
Sbjct: 320 KRYGRVHPDGLASTILTKCDPHWG--AYFHYEQDRTFTVREAARLQSFPDTYTFCG--SR 375
Query: 289 RQRYALLGNSLSIAVVAPLL 308
++Y +GN+ V PLL
Sbjct: 376 VEQYEQVGNA-----VPPLL 390
>gi|420395561|ref|ZP_14894788.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1124]
gi|393013997|gb|EJB15171.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1124]
Length = 352
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 9/93 (9%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L++L+L+ P M ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKMFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPR 96
++ Y+ + IL+ L +GVP R R
Sbjct: 126 FKQICNAFKERGYILEHAILNALDYGVPQIRER 158
>gi|416020937|ref|ZP_11566837.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. glycinea
str. B076]
gi|320321292|gb|EFW77421.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. glycinea
str. B076]
Length = 410
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 122/331 (36%), Gaps = 50/331 (15%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG---FETSDTHAK 66
PPCQ ++ ++ + D+R F + L + T P + +ENV G FE T
Sbjct: 87 GPPCQGFSINAPKRSTEDSRNHLFREYLRFV--TEFQPRAVLIENVPGMVSFEGGATLDA 144
Query: 67 MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR----------KPL-------SFR 109
++E L + Y IL +GVP +R R L R +PL +F
Sbjct: 145 ILESLKDLGYDADVRILYAPHYGVPQTRWRTIILGSRCGVDPTALFPEPLHHAPVRVNFT 204
Query: 110 CQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPV--ERFLEFSNSGDQVN 167
Q L+ P L +TV D+ L C+ E+ ++ + D N
Sbjct: 205 SQFAGKNLVNLPRSLELPSHVTV-------KDAIGDLPALCNGEIGEQVKDYRHPAD--N 255
Query: 168 TETGFLSTGTAAVDDFGAAE-ETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCC 226
+ G+ V A + ++R I W D + P R
Sbjct: 256 PYQQLMRAGSIGVTCHEAGRLSKINLERMTHIPPG-------GNWTDIPDALLPSGMRMA 308
Query: 227 CFTKSYYRYVK-GTGSLLATVQPK-NKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPH 284
+ RY + L +T+ K + + + R FT RE A + SFP + F
Sbjct: 309 RRSDHTKRYGRVNPEGLASTILTKCDPHWGAYFHYEQDRAFTVREAARIQSFPDTYVFCG 368
Query: 285 HLSLRQRYALLGNSLSIAVVAPLLQYLFAQA 315
S ++Y +GN+ V PLL QA
Sbjct: 369 --SRVEQYEQVGNA-----VPPLLGAAVGQA 392
>gi|420502448|ref|ZP_15000989.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-41]
gi|393153728|gb|EJC54021.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-41]
Length = 351
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L+IL+L+ P + ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRILDLV-----KPKIFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
++ Y+ + IL+ L +GVP R R + K
Sbjct: 126 FQRICNAFKERGYILEHAILNALDYGVPQIRERVILVGALK 166
>gi|257061088|ref|YP_003138976.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802]
gi|256591254|gb|ACV02141.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802]
Length = 331
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 5/95 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQP++ G +K +D R F I ++I K P + +ENV + + T +I
Sbjct: 74 PCQPFSICGKKKGFNDTRGTLFFYICQII--AAKQPQAVILENVKHLIHHQQGKTLETII 131
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 103
L + +YL +L+ FGVP R R +A R
Sbjct: 132 YALEDLEYLVDYQLLNAKDFGVPQHRERIVIIATR 166
>gi|420530985|ref|ZP_15029360.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-28b]
gi|393139011|gb|EJC39392.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-28b]
Length = 351
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L+IL+L+ P + ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRILDLV-----KPKIFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
++ Y+ + IL+ L +GVP R R + K
Sbjct: 126 FQRICNAFKERGYILEHAILNALDYGVPQIRERVILVGALK 166
>gi|420438503|ref|ZP_14937477.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-29]
gi|393056103|gb|EJB57015.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-29]
Length = 351
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L+IL+L+ P + ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRILDLV-----KPKIFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
++ Y+ + IL+ L +GVP R R + K
Sbjct: 126 FQRICNAFKERGYILEHAILNALDYGVPQIRERVILVGALK 166
>gi|258652183|ref|YP_003201339.1| DNA-cytosine methyltransferase [Nakamurella multipartita DSM 44233]
gi|258555408|gb|ACV78350.1| DNA-cytosine methyltransferase [Nakamurella multipartita DSM 44233]
Length = 467
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 57/132 (43%), Gaps = 13/132 (9%)
Query: 12 PCQPYTRQGLQKQSSDA-RAFSFLKILELIPHTVKPPHMLF--VENVVGFETSDTHAKMI 68
PCQP+++ G Q D + F K+++++ T KP H L V N++ T ++
Sbjct: 81 PCQPFSKAGEQLGFKDTTQGHLFFKVIQIL-QTKKPRHFLLENVPNILKHSGGGTLQTIL 139
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGND 128
L Y LSP +FG+P R R + + R L + R P +
Sbjct: 140 AELEAIGYSVGVRRLSPHEFGIPQIRDRAYFVGSRDGL---------EQFRWPETEKSST 190
Query: 129 DMTVITKHDQPD 140
D+ + KHD D
Sbjct: 191 DIKSVLKHDLVD 202
>gi|428771327|ref|YP_007163117.1| DNA-cytosine methyltransferase [Cyanobacterium aponinum PCC 10605]
gi|428685606|gb|AFZ55073.1| DNA-cytosine methyltransferase [Cyanobacterium aponinum PCC 10605]
Length = 344
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 7/102 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G Q +D R F I+ + + P +L +ENV F D K ++++
Sbjct: 75 PCQAFSISGKQLGFNDTRGTLFFDIVRIAQY--HQPSLLILENVKNFARHD-EGKTLKVV 131
Query: 72 ANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 109
NS Y +L+ FGVP R R + L RK L+ +
Sbjct: 132 ENSLNEIGYDVFYKVLNASNFGVPQKRERIYILGFRKDLNVK 173
>gi|420399961|ref|ZP_14899165.1| cytosine-specific methyltransferase [Helicobacter pylori CPY3281]
gi|393019502|gb|EJB20645.1| cytosine-specific methyltransferase [Helicobacter pylori CPY3281]
Length = 351
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L++L+L+ P M ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLQLLDLV-----KPKMFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
++ Y+ + IL+ L +GVP R R + K
Sbjct: 126 FKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALK 166
>gi|420440236|ref|ZP_14939193.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-30]
gi|393056884|gb|EJB57793.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-30]
Length = 351
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L+IL+L+ P + ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRILDLV-----KPKIFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
++ Y+ + IL+ L +GVP R R + K
Sbjct: 126 FQRICNAFKERGYILEHAILNTLDYGVPQIRERVILVGALK 166
>gi|420410013|ref|ZP_14909156.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4200]
gi|393028326|gb|EJB29412.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4200]
Length = 351
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 9/98 (9%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L+IL+L+ P + ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRILDLV-----KPKIFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
++ Y+ + IL+ L +GVP R R +
Sbjct: 126 FQRICNAFKERGYILEHAILNALDYGVPQVRERVILVG 163
>gi|434390025|ref|YP_007125731.1| site-specific DNA methylase [Cylindrospermum stagnale PCC 7417]
gi|428262603|gb|AFZ28551.1| site-specific DNA methylase [Cylindrospermum stagnale PCC 7417]
Length = 419
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 115/325 (35%), Gaps = 82/325 (25%)
Query: 5 HAWLLSPPCQPYTRQGLQKQSSDARAF--SFLK-ILELIPHTVKPPHMLFVENVVGFETS 61
HA PPCQ ++ GLQ + + F++ +LEL P +ENV G E
Sbjct: 84 HAVFGGPPCQGFSVAGLQNVEDERNSLVGEFVRLVLELNPLAA------IMENVPGIENQ 137
Query: 62 D--THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLR 119
++ + Y ++ L+ +GVP +R R F +A R + +R
Sbjct: 138 KFGCITANLQAVLEEHYFLSKWNLNASDYGVPQARKRVFFVASRFGEIIPPKHQPQHTVR 197
Query: 120 ------SPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLE--FSNSGDQVNTETG 171
SP PLL + T+ PD W K ++LE F N N ETG
Sbjct: 198 DAIADLSPVPLLPKQN----TQEWHPD--WVK-----GEYAKYLEKIFPNLSIVTNIETG 246
Query: 172 FLSTGTAA------VDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRC 225
F +T ++ A E + + D F V L R GS
Sbjct: 247 FAATTHTPEVIQQFINTPPGAREAKSKSKKLQWDGFCVTL----RAGSG----------- 291
Query: 226 CCFTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHH 285
N+ L + R + RE A LHS+P F F
Sbjct: 292 ------------------------NRTALRPLHPEQPRVISVREAARLHSYPDWFNFSEA 327
Query: 286 LSLRQRYALLGNSLSIAVVAPLLQY 310
+ QR +GNS V PLL Y
Sbjct: 328 ILHAQRE--IGNS-----VPPLLAY 345
>gi|420459983|ref|ZP_14958782.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-27]
gi|393077085|gb|EJB77834.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-27]
Length = 348
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L++L L+ P + ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLYLVK-----PKIFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
++ DY+ + IL+ L +GVP R R + K
Sbjct: 126 FKQICNAFKERDYILEHAILNALDYGVPQIRERVILVGTLK 166
>gi|372210504|ref|ZP_09498306.1| DNA-cytosine methyltransferase [Flavobacteriaceae bacterium S85]
Length = 421
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQ ++ G + D R F + E+I K P +F+ENV G D T A ++
Sbjct: 167 PCQAFSIAGRRGGFEDTRGTLFFDVAEIIKK--KQPKAIFLENVKGLRNHDKGKTLATIL 224
Query: 69 EILAN--SDYLTQEFILSPLQFGVPYSRPRYFCLA 101
+L Y+ + I++ +FGVP +R R F +
Sbjct: 225 NVLREDLGYYVPEPQIINAKEFGVPQNRERIFIVG 259
>gi|374374531|ref|ZP_09632190.1| DNA-cytosine methyltransferase [Niabella soli DSM 19437]
gi|373233973|gb|EHP53767.1| DNA-cytosine methyltransferase [Niabella soli DSM 19437]
Length = 450
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Query: 12 PCQPYTRQGLQKQSSD-ARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAK---M 67
PCQP+++ G QK D R F +I++++ H + P +ENV D A M
Sbjct: 72 PCQPFSKAGKQKGREDEERGTLFDEIVKILAH--RKPKFFILENVPFIRQHDNEATWNYM 129
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
L Y + + SP FG+P R R F +
Sbjct: 130 HSELTKLGYEVEHEVYSPQDFGIPQHRKRIFIVG 163
>gi|420487096|ref|ZP_14985704.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-8]
gi|420520981|ref|ZP_15019412.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-8b]
gi|393104649|gb|EJC05206.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-8]
gi|393127568|gb|EJC28013.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-8b]
Length = 351
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 9/98 (9%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L+IL+L+ P + ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRILDLV-----KPKIFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
++ Y+ + IL+ L +GVP R R +
Sbjct: 126 FQRICNAFKERGYILEHAILNALDYGVPQVRERVILVG 163
>gi|420504023|ref|ZP_15002553.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-62]
gi|393155412|gb|EJC55689.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-62]
Length = 203
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L+IL+L+ P + ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRILDLV-----KPKIFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
++ Y+ + IL+ L +GVP R R + K
Sbjct: 126 FQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGAHK 166
>gi|420418415|ref|ZP_14917507.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4076]
gi|393033241|gb|EJB34304.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4076]
Length = 189
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGFETSDTHAK 66
L PPCQ Y+ G +K A F +L++L+L+ P M ENVVG S +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKMFVFENVVGL-MSMQKGQ 124
Query: 67 MIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
+ + + N+ Y+ + IL+ L +GVP R R + K
Sbjct: 125 LFQQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALK 166
>gi|127471|sp|P24581.1|MTNX_NEILA RecName: Full=Cytosine-specific methyltransferase NlaX;
Short=M.NlaX
gi|45004|emb|CAA38357.1| cytosine-specific methyltransferase of NlaIII [Neisseria lactamica]
Length = 313
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQP+++ GL+K +D R F I ++ K P +ENV + D + IL
Sbjct: 73 PCQPFSQAGLKKGFADTRGTLFFDIERIL--LAKKPQAFLLENVKQLKGHDKGRTLQVIL 130
Query: 72 AN---SDYLTQEFILSPLQFGVPYSRPRYFCLA 101
A+ + Y +L FG+P +R R + +
Sbjct: 131 AHLQQAGYKVYTEVLKARDFGIPQNRERIYLVG 163
>gi|428219888|ref|YP_007083360.1| DNA-cytosine methyltransferase [Pseudanabaena sp. PCC 7367]
gi|427992231|gb|AFY71924.1| DNA-cytosine methyltransferase [Pseudanabaena sp. PCC 7367]
Length = 413
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIE 69
PPCQ ++ G Q+ D+R + L+ I P M+ +ENV T ++ +
Sbjct: 79 GPPCQSFSYAGNQRGLDDSRGQLVYETLKTIEQV--QPKMVLIENVKHLSTINSGKVLKA 136
Query: 70 ILA---NSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
IL + Y TQ IL+ +GV +R R LA RK
Sbjct: 137 ILGRLHSLRYRTQWQILNANDYGVAQNRQRLIILATRK 174
>gi|313683546|ref|YP_004061284.1| DNA-cytosine methyltransferase [Sulfuricurvum kujiense DSM 16994]
gi|313156406|gb|ADR35084.1| DNA-cytosine methyltransferase [Sulfuricurvum kujiense DSM 16994]
Length = 332
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS---DTHAKMI 68
PC P+++ G Q D R F L++I T P + +ENV G S D K+
Sbjct: 83 PCPPFSKAGKQLGQDDERDL-FPTALKIIKKTS--PKAIMLENVPGLLESKFDDYRKKID 139
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
+ L + YLT +++ FGVP RPR + RK
Sbjct: 140 DELRSMGYLTTWQLINAKDFGVPQLRPRVILVGLRK 175
>gi|422811163|ref|ZP_16859573.1| cytosine-specific methyltransferase [Listeria monocytogenes FSL
J1-208]
gi|378750796|gb|EHY61388.1| cytosine-specific methyltransferase [Listeria monocytogenes FSL
J1-208]
Length = 412
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 122/339 (35%), Gaps = 50/339 (14%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G ++ D R F +I+ TV P LF+ENV G + D IL
Sbjct: 85 PCQAFSIAGKRRGFEDTRGTLFFEIMRWA--TVLEPETLFLENVPGLLSHDEGITFETIL 142
Query: 72 ANSD---YLTQEFILSPLQFGVPYSRPRYFCLA------KRKPLSF-RCQLLNNQLLRSP 121
D Y + L+ FGVP SR R F + +RK RC N
Sbjct: 143 RKMDEAGYDAEWDCLNACHFGVPQSRERIFLVGHSRKGRRRKVFPIERCNEQANLERIKK 202
Query: 122 SPLLGNDDMTVITKHDQPDDSWDKLLESCDPV---------ERFLEFSNSGDQVNTETGF 172
+ N + +K ++ K +C P+ + F G+ T T
Sbjct: 203 INRINNHSQVLFSKSEEAFSFVQKT--TCIPILSPEREEKRQNGRRFKTQGEPAFTITAQ 260
Query: 173 LSTGTAAVDDF-GAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKS 231
G + G E + +R S L+ ++ G ++ K
Sbjct: 261 DRHGIIVSGELEGTGRE--QSNRVYSEKGLAPTLTTMQGGGQEPKVLLVRE----ATKKG 314
Query: 232 YYRYVKGTGSLLATVQPKN-KGKASS---------------LKEQHLRYFTPREVANLHS 275
Y VK G L+ + + +G+ + ++E +R TP E L
Sbjct: 315 YAEAVKYDGINLSMPESETRRGRVAKQMTSTLDTGCQQGVVVEEMRIRKLTPLECWRLQG 374
Query: 276 FPGDFQFPHHLSLR---QRYALLGNSLSIAVVAPLLQYL 311
FP D+ F + Q Y GNS+++ V+ + + L
Sbjct: 375 FP-DWAFAAAAKVNSNSQLYKQAGNSVAVPVIVAIAENL 412
>gi|70734372|ref|YP_260119.1| DNA (cytosine-5-)-methyltransferase [Pseudomonas protegens Pf-5]
gi|68348671|gb|AAY96277.1| DNA (cytosine-5-)-methyltransferase [Pseudomonas protegens Pf-5]
Length = 394
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 56/122 (45%), Gaps = 14/122 (11%)
Query: 3 GAHAWLLSPPCQPYT--RQGLQKQSSDARAFS-------FLKILELIPHTVKPPHMLFVE 53
G AW S PCQ + GL SS A+ F+ FL +++ + + P +L +E
Sbjct: 67 GDLAWA-SFPCQDLSVAGNGLGIGSSSAKDFTRSGALWPFLDLIDTLRQEERQPPLLVLE 125
Query: 54 NVVGF---ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRC 110
NVVG E A + E L Y I+ F +P SRPR F +A ++ + C
Sbjct: 126 NVVGLLTLEGGRDFAAICERLGEIGYRYGAVIIDAKHF-LPQSRPRVFIIAVQRNIDIPC 184
Query: 111 QL 112
+L
Sbjct: 185 KL 186
>gi|210632067|ref|ZP_03297189.1| hypothetical protein COLSTE_01082 [Collinsella stercoris DSM 13279]
gi|210159724|gb|EEA90695.1| DNA (cytosine-5-)-methyltransferase [Collinsella stercoris DSM
13279]
Length = 392
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 6 AWLLSPPCQPYTRQGLQKQSSDAR-AFSFLKILELIPHTVKPPHMLFVENVVGFETSDTH 64
A + PPCQ ++ G + ++ A S+ I++ I P +ENV ++S +
Sbjct: 70 AIIGGPPCQDFSHAGKRIEAGRAGLTESYANIIQQIR-----PRCFVMENVARAQSSHAY 124
Query: 65 AKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
A EI + Y E +L+ GVP SR R+FC+
Sbjct: 125 AVAREIFKTAGYGLTEQVLTASFCGVPQSRKRFFCIG 161
>gi|10954474|ref|NP_039765.1| TIM [Methanothermobacter thermautotrophicus]
gi|266583|sp|P29567.1|MTHT_METTF RecName: Full=Modification methylase MthTI; Short=M.MthTI; AltName:
Full=Cytosine-specific methyltransferase MthTI
gi|44641|emb|CAA48436.1| TIM [Methanothermobacter thermautotrophicus]
gi|149743|gb|AAA73370.1| TIM [Methanothermobacter thermautotrophicus]
Length = 330
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 7/111 (6%)
Query: 6 AWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHA 65
++ PPCQ ++ G + D R +F ++L+ K P ENV G S TH
Sbjct: 66 GFIGGPPCQSWSLAGSMCGADDPRGKTFYAYVDLVKE--KDPLFFLAENVPGI-VSRTHL 122
Query: 66 KMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQL 112
+ L NS Y + +L+ +GVP R R F + R+ L+ + +
Sbjct: 123 PEFKRLVNSFIDIGYNVEYKVLNAKDYGVPQDRKRVFIVGYREDLNLKFEF 173
>gi|171920707|ref|ZP_02931926.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 13
str. ATCC 33698]
gi|185179015|ref|ZP_02964765.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 5
str. ATCC 27817]
gi|188024024|ref|ZP_02996783.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 7
str. ATCC 27819]
gi|188518336|ref|ZP_03003849.1| cytosine-specific methyltransferase NlaX [Ureaplasma urealyticum
serovar 11 str. ATCC 33695]
gi|188524309|ref|ZP_03004347.1| cytosine-specific methyltransferase [Ureaplasma urealyticum serovar
12 str. ATCC 33696]
gi|198273488|ref|ZP_03206024.1| cytosine-specific methyltransferase [Ureaplasma urealyticum serovar
4 str. ATCC 27816]
gi|225550923|ref|ZP_03771872.1| DNA (cytosine-5-)-methyltransferase [Ureaplasma urealyticum serovar
2 str. ATCC 27814]
gi|225551062|ref|ZP_03772008.1| DNA (cytosine-5-)-methyltransferase [Ureaplasma urealyticum serovar
8 str. ATCC 27618]
gi|171903447|gb|EDT49736.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 13
str. ATCC 33698]
gi|184209104|gb|EDU06147.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 5
str. ATCC 27817]
gi|188019052|gb|EDU57092.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 7
str. ATCC 27819]
gi|188997975|gb|EDU67072.1| cytosine-specific methyltransferase NlaX [Ureaplasma urealyticum
serovar 11 str. ATCC 33695]
gi|195660089|gb|EDX53469.1| cytosine-specific methyltransferase [Ureaplasma urealyticum serovar
12 str. ATCC 33696]
gi|198250008|gb|EDY74788.1| cytosine-specific methyltransferase [Ureaplasma urealyticum serovar
4 str. ATCC 27816]
gi|225378877|gb|EEH01242.1| DNA (cytosine-5-)-methyltransferase [Ureaplasma urealyticum serovar
8 str. ATCC 27618]
gi|225380077|gb|EEH02439.1| DNA (cytosine-5-)-methyltransferase [Ureaplasma urealyticum serovar
2 str. ATCC 27814]
Length = 319
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G QK +D R F +I+ +I VK P + +ENV ET D + +++
Sbjct: 74 PCQAFSIAGYQKGFNDERGNLFFEIVRII--KVKKPRAILLENVKNLETHD-NGNTFKVI 130
Query: 72 ANS----DYLTQEFILSPLQFG-VPYSRPRYFCLA 101
N Y +L+ + +G VP +R R + +
Sbjct: 131 KNELEKLGYHVHHKVLNTMDYGNVPQNRERIYIVG 165
>gi|317500279|ref|ZP_07958506.1| cytosine-specific methyltransferase [Lachnospiraceae bacterium
8_1_57FAA]
gi|331087487|ref|ZP_08336423.1| hypothetical protein HMPREF1025_00006 [Lachnospiraceae bacterium
3_1_46FAA]
gi|316898322|gb|EFV20366.1| cytosine-specific methyltransferase [Lachnospiraceae bacterium
8_1_57FAA]
gi|330410467|gb|EGG89898.1| hypothetical protein HMPREF1025_00006 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 410
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 41/98 (41%), Gaps = 5/98 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQ ++ G + DAR F + P M ENV G T D T+A +
Sbjct: 155 PCQAFSYAGKRLGLEDARGTLFYHYATFLQKL--QPKMFLFENVRGLLTHDKGRTYATIT 212
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 106
I + Y Q+ +L+ FGVP R R + R L
Sbjct: 213 NIFEQAGYTIQKKVLNAWDFGVPQKRERLITVGIRNDL 250
>gi|308229532|gb|ADO24181.1| M.ApaI [Acetobacter pasteurianus subsp. pasteurianus]
Length = 349
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
Query: 10 SPPCQPYTRQGLQKQSSDARAF--SFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
PPCQP++ GL++ ++DAR F+++L+ + P ENV G T + +
Sbjct: 70 GPPCQPFSTGGLRRGTADARNMFPEFMRVLKEV-----RPAAFLAENVPGLATRNRVQYL 124
Query: 68 IEILANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRK 104
E+L + L ++S +GVP R R + +K
Sbjct: 125 AELLNEFEALGFNVSWNVVSAADYGVPQKRRRLIIVGMKK 164
>gi|195867949|ref|ZP_03079946.1| cytosine-specific methyltransferase [Ureaplasma urealyticum serovar
9 str. ATCC 33175]
gi|195660345|gb|EDX53605.1| cytosine-specific methyltransferase [Ureaplasma urealyticum serovar
9 str. ATCC 33175]
Length = 319
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G QK +D R F +I+ +I VK P + +ENV ET D + +++
Sbjct: 74 PCQAFSIAGYQKGFNDERGNLFFEIVRII--KVKKPRAILLENVKNLETHD-NGNTFKVI 130
Query: 72 ANS----DYLTQEFILSPLQFG-VPYSRPRYFCLA 101
N Y +L+ + +G VP +R R + +
Sbjct: 131 KNELEKLGYHVHHKVLNTMDYGNVPQNRERIYIVG 165
>gi|209554428|ref|YP_002284952.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 10
str. ATCC 33699]
gi|209541929|gb|ACI60158.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 10
str. ATCC 33699]
Length = 319
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G QK +D R F +I+ +I VK P + +ENV ET D + +++
Sbjct: 74 PCQAFSIAGYQKGFNDERGNLFFEIVRII--KVKKPRAILLENVKNLETHD-NGNTFKVI 130
Query: 72 ANS----DYLTQEFILSPLQFG-VPYSRPRYFCLA 101
N Y +L+ + +G VP +R R + +
Sbjct: 131 KNELEKLGYHVHHKVLNTMDYGNVPQNRERIYIVG 165
>gi|419642666|ref|ZP_14174450.1| type II DNA modification enzyme [Campylobacter jejuni subsp. jejuni
ATCC 33560]
gi|380624230|gb|EIB42892.1| type II DNA modification enzyme [Campylobacter jejuni subsp. jejuni
ATCC 33560]
Length = 320
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 12/103 (11%)
Query: 12 PCQPYT----RQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---TH 64
PCQ ++ R+GL + F IL+ +K P+ +ENV G D T
Sbjct: 72 PCQSFSIVGKREGLDNKEKGQVIFYLADILK-----IKQPNFFILENVKGLLNHDKGQTF 126
Query: 65 AKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 107
K++E+L + DY +L+ L F + SR R + + +K L+
Sbjct: 127 QKILELLKSLDYEVSTKLLNSLDFSLAQSRERVYFIGIKKSLN 169
>gi|315917403|ref|ZP_07913643.1| type II restriction-modification system methylation subunit
[Fusobacterium gonidiaformans ATCC 25563]
gi|313691278|gb|EFS28113.1| type II restriction-modification system methylation subunit
[Fusobacterium gonidiaformans ATCC 25563]
Length = 320
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 51/123 (41%), Gaps = 6/123 (4%)
Query: 12 PCQPYTRQGLQK---QSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMI 68
PCQ ++R GL+K + S R+ + + +I P ++ ENV G + A
Sbjct: 77 PCQDFSRSGLKKGGEKGSGTRSSLLFETIRIIEEMKIRPKIVLWENVKGVLDKNMRASFF 136
Query: 69 EILANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLL 125
L + L E IL+ + FG+P R R F ++ SF L R S +
Sbjct: 137 HYLKEMERLGYENKYEILNAMDFGIPQKRERIFVVSILGNNSFDFAKLEKTQTRDISEFI 196
Query: 126 GND 128
D
Sbjct: 197 EKD 199
>gi|304373674|ref|YP_003858419.1| putative DNA-methyltransferase, type II restriction-modification
system [Enterobacteria phage RB16]
gi|299829630|gb|ADJ55423.1| putative DNA-methyltransferase, type II restriction-modification
system [Enterobacteria phage RB16]
Length = 302
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 5 HAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD- 62
H LL+ PCQ +++ GL+ DAR F +IL +I K P +LF ENV T D
Sbjct: 64 HDILLAGFPCQAFSKAGLKLGFDDARGTVFFEILRII--RAKKPRVLFFENVPELLTHDK 121
Query: 63 --THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCL 100
T + +L Y L+ FG+P R R F +
Sbjct: 122 GKTFKTIYGLLEAEGYNVFYQRLNTKDFGLPQRRERVFIV 161
>gi|404378161|ref|ZP_10983259.1| modification methylase NgoPII [Simonsiella muelleri ATCC 29453]
gi|294484031|gb|EFG31714.1| modification methylase NgoPII [Simonsiella muelleri ATCC 29453]
Length = 331
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 117/318 (36%), Gaps = 68/318 (21%)
Query: 10 SPPCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
PPCQ ++ G + DAR F +++IL+ K P ENV G S
Sbjct: 70 GPPCQSWSEAGALRGIDDARGQLFFDYIRILK-----SKQPKFFLAENVSGMLANRHSQA 124
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSP 123
++++ Y +++ +GV R R F + RK L+ + Q
Sbjct: 125 VQNLLKMFDECGYDVSLTLVNAKNYGVAQERKRVFYIGFRKDLNIKFQFPQGSTADDKHK 184
Query: 124 LLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTE--TGFLSTGTAAVD 181
L D M + K P + ++N N E TG ST + +
Sbjct: 185 LTLKDVMADLQKTAVPASEKN--------------YANPQAINNNEYFTGSFSTIFMSRN 230
Query: 182 DFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGS 241
A E F V S G + +P + + + ++ +R+V G
Sbjct: 231 RVKAWNE----------QGFTVQAS-----GRQCQL-HPQAPKMVKYGENDFRFVTG--- 271
Query: 242 LLATVQPKNKGKASSLKEQHL-RYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLS 300
++HL R T REVA L FP +F+ + + Y ++GN++
Sbjct: 272 -----------------QEHLYRRMTVREVARLQGFPDNFKLIYQ-KIDDGYKMIGNAVP 313
Query: 301 IAV---VAPLLQYLFAQA 315
+ + +A ++ +F A
Sbjct: 314 VQLAYEIAVAIKQVFQAA 331
>gi|406980256|gb|EKE01884.1| hypothetical protein ACD_21C00028G0001 [uncultured bacterium]
Length = 319
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS---DTHAKMI 68
PC P+++ G Q + D R F + L L+ P + +ENV G S + AK+I
Sbjct: 73 PCPPFSKAGKQLGNQDERDL-FPEALRLVSEC--KPQAVMLENVRGLLDSVFDEYRAKII 129
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 107
L Y+ + +L+ FGVP RPR +A +K ++
Sbjct: 130 ADLKKLGYIAEWRLLNASDFGVPQLRPRVIFVALKKSVA 168
>gi|429768797|ref|ZP_19300930.1| DNA (cytosine-5-)-methyltransferase [Brevundimonas diminuta 470-4]
gi|429188558|gb|EKY29437.1| DNA (cytosine-5-)-methyltransferase [Brevundimonas diminuta 470-4]
Length = 386
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 57/134 (42%), Gaps = 18/134 (13%)
Query: 10 SPPCQPYT----RQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTH- 64
S PCQ + R GL+ Q S A + F K+++ + + P ++ +ENVVG TS
Sbjct: 86 SSPCQDVSLAGARGGLKAQRSGA-FWGFWKLMQGLDAQGRAPRLIVLENVVGLLTSGEGQ 144
Query: 65 --AKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK---------PLSFRCQLL 113
A + + + Y L + +P SRPR F +A R L F L
Sbjct: 145 DFAAVCGAMVEAGYTVGALELD-AELWLPQSRPRLFIIAMRGVEGPRLKGPALPFHSPRL 203
Query: 114 NNQLLRSPSPLLGN 127
R P+PL N
Sbjct: 204 TAAWARLPAPLKAN 217
>gi|157737722|ref|YP_001490405.1| DNA (cytosine-5-)-methyltransferase [Arcobacter butzleri RM4018]
gi|157699576|gb|ABV67736.1| DNA (Cytosine-5-)-methyltransferase [Arcobacter butzleri RM4018]
Length = 326
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 5/97 (5%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---TH 64
L PCQ ++ G +K D R F + ++ P ++F+ENV GF+ D T
Sbjct: 87 LAGFPCQAFSIAGHRKGFDDIRGTLFFDVARIV--NKHKPQVVFLENVKGFKNHDKGNTF 144
Query: 65 AKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
+ L + Y +L+ FGVP +R R + +A
Sbjct: 145 NTVKSTLEDMGYRVFAEVLNARNFGVPQNRERIYIIA 181
>gi|331091845|ref|ZP_08340677.1| hypothetical protein HMPREF9477_01320 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330402744|gb|EGG82311.1| hypothetical protein HMPREF9477_01320 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 410
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 41/98 (41%), Gaps = 5/98 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQ ++ G + DAR F + P M ENV G T D T+A +
Sbjct: 155 PCQAFSYAGKRLGLEDARGTLFYHYATFLQKL--QPKMFLFENVRGLLTHDKGRTYATIT 212
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 106
I + Y Q+ +L+ FGVP R R + R L
Sbjct: 213 NIFEQAGYTIQKKVLNAWDFGVPQKRERLITVGIRNDL 250
>gi|327403407|ref|YP_004344245.1| DNA-cytosine methyltransferase [Fluviicola taffensis DSM 16823]
gi|327318915|gb|AEA43407.1| DNA-cytosine methyltransferase [Fluviicola taffensis DSM 16823]
Length = 422
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 7/101 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G + D R F + E+I K P F+ENV G D + IL
Sbjct: 167 PCQAFSIAGKRGGFEDTRGTLFFDVAEIIKQ--KQPKAFFLENVKGLFNHDKGKTLKTIL 224
Query: 72 A--NSD---YLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 107
D Y+ +++ FGVP +R R F + RK L+
Sbjct: 225 NVLREDLGYYVPDPKVMNAKNFGVPQNRERIFIVGFRKDLN 265
>gi|422878164|ref|ZP_16924630.1| DNA (cytosine-5-)-methyltransferase [Streptococcus sanguinis
SK1059]
gi|332367371|gb|EGJ45104.1| DNA (cytosine-5-)-methyltransferase [Streptococcus sanguinis
SK1059]
Length = 329
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 19/120 (15%)
Query: 10 SPPCQPYTRQGLQKQSSDAR---AFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAK 66
PPCQ ++ G ++Q+ D R S+++I++L+ P MLF ENV GF K
Sbjct: 100 GPPCQGFSMAG-KRQNDDVRNQLMHSYVEIIKLVQ-----PKMLFFENVQGFTVDFKDHK 153
Query: 67 --------MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS--FRCQLLNNQ 116
+I L Y I++ FG+P +R R+ A + F +L NN+
Sbjct: 154 DKKNYSNILISELKRLGYQLDYKIITMSDFGIPQNRKRFILFASKNETYEIFFEELFNNR 213
>gi|425432238|ref|ZP_18812810.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori GAM100Ai]
gi|410715217|gb|EKQ72642.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori GAM100Ai]
Length = 213
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L++L+L+ P + ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFIFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
++ Y+ + IL+ L +GVP R R + K
Sbjct: 126 FQRICNAFKERGYILEHAILNALDYGVPQIRERVILVGALK 166
>gi|390942511|ref|YP_006406272.1| DNA-methyltransferase Dcm [Belliella baltica DSM 15883]
gi|390415939|gb|AFL83517.1| DNA-methyltransferase Dcm [Belliella baltica DSM 15883]
Length = 425
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 7/103 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQ ++ G + D R F + E+I K P F+ENV G D T + ++
Sbjct: 170 PCQAFSIAGKRGGFEDTRGTLFYDVAEIIKR--KKPKAFFLENVKGLVNHDRGRTLSTIL 227
Query: 69 EILAN--SDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 109
+L N Y+ +++ FGVP +R R F + R L +
Sbjct: 228 NVLRNDLGYYVPDPKVINAKDFGVPQNRERIFIVGFRSDLGIK 270
>gi|383749898|ref|YP_005425001.1| type II DNA modification (methyltransferase) [Helicobacter pylori
ELS37]
gi|380874644|gb|AFF20425.1| type II DNA modification (methyltransferase) [Helicobacter pylori
ELS37]
Length = 167
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 9/95 (9%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L++L+L+ P + ENVVG +
Sbjct: 78 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFVFENVVGLMSMQKGQL 132
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYF 98
++ Y+ + IL+ L +G P R R F
Sbjct: 133 FQRICNAFKERGYILEHAILNALDYGAPQVRGRVF 167
>gi|399992138|ref|YP_006572378.1| modification methylase NaeI [Phaeobacter gallaeciensis DSM 17395 =
CIP 105210]
gi|400753815|ref|YP_006562183.1| modification methylase NaeI [Phaeobacter gallaeciensis 2.10]
gi|398652968|gb|AFO86938.1| modification methylase NaeI [Phaeobacter gallaeciensis 2.10]
gi|398656693|gb|AFO90659.1| modification methylase NaeI [Phaeobacter gallaeciensis DSM 17395 =
CIP 105210]
Length = 324
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 46/99 (46%), Gaps = 6/99 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS---DTHAKMI 68
PC P++ G Q D R F +E++ T P + +ENV GF + D K+
Sbjct: 74 PCPPFSVAGKQLGEKDERNL-FDDAIEIVAATR--PRAVMIENVRGFLDAVFHDYREKLK 130
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 107
LA Y T +L+ +GVP RPR +A RK S
Sbjct: 131 TQLAKLGYETDWRLLNASDYGVPQLRPRVAIVALRKEFS 169
>gi|406660433|ref|ZP_11068565.1| Modification methylase HpaII [Cecembia lonarensis LW9]
gi|405555818|gb|EKB50824.1| Modification methylase HpaII [Cecembia lonarensis LW9]
Length = 418
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 7/101 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQ ++ G + D R F + E+I K P F+ENV G D T A ++
Sbjct: 165 PCQAFSIAGRRGGFEDTRGTLFFDVAEIIRR--KKPKAFFLENVKGLVNHDRGRTLATIL 222
Query: 69 EILAN--SDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 107
+L ++ + +++ FGVP +R R F + RK L
Sbjct: 223 NVLREDLGYFVPEPKVINAKDFGVPQNRERIFIVGFRKDLG 263
>gi|420473869|ref|ZP_14972547.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-19]
gi|393090997|gb|EJB91630.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-19]
Length = 351
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L++L+L+ P + ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFIFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
++ Y+ + IL+ L +GVP R R + K
Sbjct: 126 FQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGALK 166
>gi|84686808|ref|ZP_01014695.1| DNA methylase, C-5 cytosine-specific family protein [Maritimibacter
alkaliphilus HTCC2654]
gi|84665239|gb|EAQ11718.1| DNA methylase, C-5 cytosine-specific family protein
[Rhodobacterales bacterium HTCC2654]
Length = 336
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 125/312 (40%), Gaps = 22/312 (7%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG---FETSDTHAK 66
PPCQ ++ ++ + D R FL+ L + P + +ENV G FE T
Sbjct: 14 GPPCQGFSINAPKRSADDDRNSLFLEFLRFVDEF--EPKAVLIENVPGLVSFEGGGTLQA 71
Query: 67 MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR----KPLSFRCQLLNNQLLRS-- 120
++ L + Y IL FGVP +R R + R PL + + N LR
Sbjct: 72 ILLALGHHGYSADVKILYAPHFGVPQTRWRTVIIGIRGDQADPLRAFPEPVRNAPLRVNF 131
Query: 121 PSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAV 180
S G + + + T + P S+ + ++ D + ++ N +G + A+
Sbjct: 132 TSNFEGKNIVALPTNLELP--SFVSVRDAIDDLPALANGEIGKERKNYRSGPQNDFQVAM 189
Query: 181 DDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDI---VYPDSKRCCCFTKSYYRYVK 237
+ E R I+ + +S I G+ DI + P R + RY +
Sbjct: 190 RNGSDGVLNHEAPRLGEIN--IKRMSFIPPGGNWTDIPEDLLPRGMRRARRSDHTKRYGR 247
Query: 238 -GTGSLLATVQPK-NKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALL 295
L +T+ K + + + R FT RE A + +FP ++F S ++Y +
Sbjct: 248 VAPDGLASTILTKCDPHWGAYFHYEQDRCFTVREAARIQTFPDSYRFVG--SRVEQYEQV 305
Query: 296 GNSLSIAVVAPL 307
GN++ + A +
Sbjct: 306 GNAVPSLLAAAI 317
>gi|420478963|ref|ZP_14977615.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-34]
gi|393096518|gb|EJB97116.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-34]
Length = 351
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L++L+L+ P + ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFIFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
++ Y+ + IL+ L +GVP R R + K
Sbjct: 126 FQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGALK 166
>gi|421167196|ref|ZP_15625399.1| modification methylase DdeI [Pseudomonas aeruginosa ATCC 700888]
gi|404535453|gb|EKA45147.1| modification methylase DdeI [Pseudomonas aeruginosa ATCC 700888]
Length = 486
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 19/119 (15%)
Query: 5 HAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDT- 63
H PPCQ ++ G ++ SD R F K +E++ ++P L +ENV G + +
Sbjct: 133 HVLAGGPPCQGFSFAG-KRNESDPRNKLFEKYVEMV-QAIRP-SALVLENVPGMKVAHAT 189
Query: 64 ---------------HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 107
+ K++E L Y Q I+ +FGVP RPR + RK L+
Sbjct: 190 KKWKQLGISIKPQSYYDKLVESLDRIGYHVQGNIVDSSRFGVPQKRPRLIVIGLRKDLA 248
>gi|374599926|ref|ZP_09672928.1| DNA-cytosine methyltransferase [Myroides odoratus DSM 2801]
gi|423325087|ref|ZP_17302928.1| DNA (cytosine-5-)-methyltransferase [Myroides odoratimimus CIP
103059]
gi|373911396|gb|EHQ43245.1| DNA-cytosine methyltransferase [Myroides odoratus DSM 2801]
gi|404607096|gb|EKB06630.1| DNA (cytosine-5-)-methyltransferase [Myroides odoratimimus CIP
103059]
Length = 414
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 70/332 (21%), Positives = 123/332 (37%), Gaps = 48/332 (14%)
Query: 12 PCQPYTRQGLQKQSSD---ARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTH---- 64
PCQ Y+ K S + + I ++ P L ENV S ++
Sbjct: 87 PCQDYSVATTLKNSKGILGKKGVLWWSINRILTEKENKPRYLIFENVDRLLKSPSNQRGR 146
Query: 65 --AKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR---------KPLSFRCQLL 113
A M++ L + Y + +++ +G+P R R F + + +
Sbjct: 147 DFAVMLKCLNDLGYAVEWRVINAADYGMPQKRRRVFFIGYHITSEVYQTIDASDLQAWCI 206
Query: 114 NNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFL 173
N+ ++ + P+ G D V KH +DS + + E + EF N+G +N +
Sbjct: 207 NDGIIANAFPV-GTD--VVNEKHIAFNDSLNNISEEFGKGRKISEFENAGIMINGQIY-- 261
Query: 174 STGTAAVDDFGAAEETVEVDRCVSIDH----FLVPLSLIERWGSAMDIVYPDSKRCCCFT 229
TA V V D ++++ + +P I++W K F
Sbjct: 262 ---TAKVKPQYEGNRQVLKDILENVENVPQEYFIPDEDIDKWNYLKGAKKEIRKSSTGFE 318
Query: 230 KSYYRYVKGTGSLL--------ATVQPKNKGKASSL------KEQHLRYFTPREVANLHS 275
Y Y +G G + T+ GK+ S E+ LR P E+ L+
Sbjct: 319 ---YNYAEG-GMIFPDNIEDASRTIITGEGGKSPSRFKHVVKTEKGLRRLMPVELERLNM 374
Query: 276 FPGDFQFPHHLSLRQRYALLGNSLSIAVVAPL 307
FP + ++ +R L+GN+L +V L
Sbjct: 375 FPDNHTQQIGVTDTKRAFLMGNALVTGIVTKL 406
>gi|421716580|ref|ZP_16155890.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R037c]
gi|407220104|gb|EKE89913.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R037c]
Length = 168
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGFETSDTHAK 66
L PPCQ Y+ G +K A F +L++L+L VKP +F ENVVG S +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDL----VKPKIFVF-ENVVGL-MSMQKGQ 124
Query: 67 MIEILANS----DYLTQEFILSPLQFGVPYSRPR 96
+ + + N+ Y+ + IL+ L +GVP R R
Sbjct: 125 LFQQICNAFKERGYILEHAILNALDYGVPQIRER 158
>gi|326798326|ref|YP_004316145.1| DNA-cytosine methyltransferase [Sphingobacterium sp. 21]
gi|326549090|gb|ADZ77475.1| DNA-cytosine methyltransferase [Sphingobacterium sp. 21]
Length = 409
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 7/101 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQ ++ G + D R F + E+I P F+ENV G D T ++
Sbjct: 155 PCQAFSIAGKRGGFEDTRGTLFFDVAEIIKR--HQPKAFFLENVKGLRNHDKGRTLTTIL 212
Query: 69 EILAN--SDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 107
+L N + ++ I++ FGVP +R R F + RK L
Sbjct: 213 NVLRNDLNYFVPDPEIVNAKNFGVPQNRERIFIVGYRKDLG 253
>gi|420425058|ref|ZP_14924122.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-5]
gi|393043645|gb|EJB44649.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-5]
Length = 298
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L++L+L+ P + ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
++ Y+ + IL+ L +GVP R R + K
Sbjct: 126 FQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGALK 166
>gi|197106819|ref|YP_002132196.1| DNA-cytosine methyltransferase [Phenylobacterium zucineum HLK1]
gi|196480239|gb|ACG79767.1| DNA-cytosine methyltransferase [Phenylobacterium zucineum HLK1]
Length = 375
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 10/107 (9%)
Query: 6 AWLLSPPCQPYT----RQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
AW S PCQ ++ R GL+ S A F F K++ + + P ++ +ENVVG TS
Sbjct: 73 AWA-SSPCQDFSLAGARAGLEGGRSSA-FFGFWKLIRELGGEGRAPSLVVIENVVGLLTS 130
Query: 62 DTHAKMIEI---LANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKP 105
A + LA Y+ + +P SRPR F +A + P
Sbjct: 131 RGGADFAALGRALAAEGYVFGALEIDAAHL-LPQSRPRVFVVASKVP 176
>gi|307149806|ref|YP_003890849.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822]
gi|306986606|gb|ADN18484.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822]
Length = 645
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIE 69
SPPCQ ++ Q+ +D L I T+KP + +ENVV + S + + E
Sbjct: 93 SPPCQKFSLSNPQRGETDNDLELALTTRRAI-ETLKP-QVFTLENVVPYAKSLSFQTIKE 150
Query: 70 ILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
L Y +E IL FGVP R R+F +A
Sbjct: 151 TLEKLGYQYRELILDAADFGVPQCRKRFFLVA 182
>gi|420480501|ref|ZP_14979145.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-1]
gi|420510945|ref|ZP_15009434.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-1b]
gi|393098414|gb|EJB99006.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-1]
gi|393121453|gb|EJC21936.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-1b]
Length = 351
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L++L+L+ P + ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFIFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
++ Y+ + IL+ L +GVP R R + K
Sbjct: 126 FKQICNAFKERGYILEHAILNALDYGVPQMRERVILVGALK 166
>gi|386745963|ref|YP_006219180.1| type II DNA modification (methyltransferase) [Helicobacter pylori
HUP-B14]
gi|384552212|gb|AFI07160.1| type II DNA modification (methyltransferase) [Helicobacter pylori
HUP-B14]
Length = 351
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L++L+L+ P + ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
++ Y+ + IL+ L +GVP R R + K
Sbjct: 126 FQRICNAFKERGYILEHAILNALDYGVPQMRERVILVGALK 166
>gi|420483743|ref|ZP_14982373.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-3]
gi|420514098|ref|ZP_15012571.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-3b]
gi|393102968|gb|EJC03532.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-3]
gi|393158561|gb|EJC58821.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-3b]
Length = 203
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L+IL+L+ P + ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRILDLV-----KPKIFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
++ Y+ + IL+ L +GVP R R + K
Sbjct: 126 FQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGALK 166
>gi|420441830|ref|ZP_14940775.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-36]
gi|393059959|gb|EJB60834.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-36]
Length = 352
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L++L+L+ P + ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
++ Y+ + IL+ L +GVP R R + K
Sbjct: 126 FQRICNAFKERGYILEHAILNALDYGVPQIRERVILVGIHK 166
>gi|327399867|ref|YP_004346898.1| cytosine-specific methyltransferase [Lactobacillus amylovorus GRL
1112]
gi|327182537|gb|AEA32972.1| cytosine-specific methyltransferase [Lactobacillus amylovorus GRL
1112]
Length = 401
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQ ++ G +K D R F ++L +I K P ++F+ENV V + +T +
Sbjct: 81 PCQAFSIAGYRKGFEDDRGDLFFELLRMI--NAKRPRVIFIENVKNLVSHDHGNTFKVIR 138
Query: 69 EILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 101
E L +DY + +L+ +G +P +R R + +
Sbjct: 139 EALVENDYYIKWKVLNGKDYGNIPQNRERIYVVG 172
>gi|421489648|ref|ZP_15937025.1| putative modification methylase BanI [Streptococcus anginosus
SK1138]
gi|400374715|gb|EJP27631.1| putative modification methylase BanI [Streptococcus anginosus
SK1138]
Length = 418
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 5/101 (4%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G ++ D R F +I ++ P LF+ENV G D IL
Sbjct: 78 PCQAFSIAGARRGFEDTRGTLFFEIARFA--SILKPRYLFLENVKGLLNHDKGNTFEVIL 135
Query: 72 ANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRKPLSFR 109
+ D L + +L+ FGVP +R R F + + S R
Sbjct: 136 SALDELGYDVEWQVLNSKNFGVPQNRERVFIIGHLRGGSGR 176
>gi|420430157|ref|ZP_14929187.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-20]
gi|393048776|gb|EJB49743.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-20]
Length = 351
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 9/93 (9%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L++L+L+ P + ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFIFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPR 96
++ Y+ + IL+ L +GVP R R
Sbjct: 126 FQRICNAFKERGYILEHAILNALDYGVPQVRER 158
>gi|420470231|ref|ZP_14968941.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-11]
gi|393086356|gb|EJB87033.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-11]
Length = 348
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGFETSDTHAK 66
L PPCQ Y+ G +K A F +L++L+L+ P + ENVVG S +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFIFENVVGL-MSMQKGQ 124
Query: 67 MIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
+ + + N+ Y+ + IL+ L +GVP R R + K
Sbjct: 125 LFQQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALK 166
>gi|386748677|ref|YP_006221885.1| type II DNA modification (methyltransferase) [Helicobacter cetorum
MIT 99-5656]
gi|384554919|gb|AFI06675.1| type II DNA modification (methyltransferase) [Helicobacter cetorum
MIT 99-5656]
Length = 349
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G ++ A F +L++L+L+ P + ENVVG +
Sbjct: 72 LGGPPCQSYSTLGKRQMDEKANLFKEYLRVLDLV-----KPKIFIFENVVGLMSMQKGQL 126
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
K+ + Y+ + IL+ L +GVP R R +
Sbjct: 127 FKKICSAFKDRGYILEYTILNALDYGVPQIRERVILVG 164
>gi|420420451|ref|ZP_14919537.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4161]
gi|393036142|gb|EJB37182.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4161]
Length = 165
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 9/93 (9%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAF-SFLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L++L+L VKP +F ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDL----VKPKIFIF-ENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPR 96
++ L Y+ + IL+ L +G P R R
Sbjct: 126 FQQICNALKERGYILEHAILNALDYGAPQVRER 158
>gi|296126560|ref|YP_003633812.1| DNA-cytosine methyltransferase [Brachyspira murdochii DSM 12563]
gi|296018376|gb|ADG71613.1| DNA-cytosine methyltransferase [Brachyspira murdochii DSM 12563]
Length = 311
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 57/136 (41%), Gaps = 11/136 (8%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQP++ G +K D R F I +I + P + +ENV E D T +I
Sbjct: 69 PCQPFSVAGYRKGFDDTRGTLFFDIARIIKY--HKPKAILLENVKNLENHDNGNTLKTII 126
Query: 69 EILANSDYLTQEFILSPLQF-GVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGN 127
L N +Y +L+ ++ +P +R R F A K C N + P P+
Sbjct: 127 NTLRNLNYYVSYKVLNSAEYSNIPQNRERIFIAAFSKEKV--CSYSN---FKFPEPVELT 181
Query: 128 DDMTVITKHDQPDDSW 143
+ H++ DD +
Sbjct: 182 KTIHDFIDHEKQDDIY 197
>gi|427730822|ref|YP_007077059.1| DNA-methyltransferase Dcm [Nostoc sp. PCC 7524]
gi|427366741|gb|AFY49462.1| DNA-methyltransferase Dcm [Nostoc sp. PCC 7524]
Length = 455
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 6/106 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEI- 70
PCQP++ G + D R + ++ L+ + +P +F ENV G + + I
Sbjct: 98 PCQPWSVAGCLRGFDDPRGKLWFDVIRLVNQS-QPKSFIF-ENVSGLASPKNRENLELIL 155
Query: 71 --LANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLN 114
L N Y + IL+ FG+P +R R F + RK + +CQ N
Sbjct: 156 HELENIGYCVKWKILNAYDFGLPQNRDRVFIVGIRKDIE-KCQEYN 200
>gi|420499030|ref|ZP_14997587.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-26]
gi|393153009|gb|EJC53305.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-26]
Length = 160
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAF-SFLKILELIPHTVKPPHMLFVENVVGFETSDTHAK 66
L PPCQ Y+ G +K A F +L++L+L+ P + ENVVG S +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFVFENVVGL-MSMQKGQ 124
Query: 67 MIEILANS----DYLTQEFILSPLQFGVPYSRPR 96
+ + + N+ Y+ + IL+ L +GVP R R
Sbjct: 125 LFQQICNAFKERGYILEHAILNALDYGVPQIRER 158
>gi|420465164|ref|ZP_14963931.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-6]
gi|393082651|gb|EJB83367.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-6]
Length = 351
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L++L+L+ P + ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
++ Y+ + IL+ L +GVP R R + K
Sbjct: 126 FQRICNAFKERGYILEHAILNALDYGVPQIRERVILVGALK 166
>gi|420488940|ref|ZP_14987537.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-11]
gi|393107690|gb|EJC08230.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-11]
Length = 351
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L++L+L+ P + ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
++ Y+ + IL+ L +GVP R R + K
Sbjct: 126 FQRICNAFKERGYILEHAILNALDYGVPQIRERVILVGIHK 166
>gi|462657|sp|P34877.1|MTSA_LACLC RecName: Full=Modification methylase ScrFIA; Short=M.ScrFI-A;
Short=M.ScrFIA; AltName: Full=Cytosine-specific
methyltransferase ScrFIA
gi|149493|gb|AAA25220.1| SCRFI methylase [Lactococcus lactis]
gi|2327034|gb|AAB66696.1| 5-methyl-cytosine methyltransferase [Lactococcus lactis subsp.
cremoris]
Length = 389
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 18/143 (12%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQ +++ G + D R F +I +I K P +ENV +T D T ++
Sbjct: 148 PCQAFSQAGKKLGFDDTRGTLFFEIARIIKE--KRPKAFLLENVKNLKTHDKGRTFKTIL 205
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLA-KRKPLSFRCQLLNNQLLRSPSPL--- 124
L DY + FG+P +R R + + RK +S N + P+PL
Sbjct: 206 NTLEELDYEVHTALFKARDFGLPQNRERIYIVGFDRKSIS------NYSDFQMPTPLQEK 259
Query: 125 --LGNDDMTVI-TKHDQPDDSWD 144
+GN +V+ K+ D WD
Sbjct: 260 TRVGNILESVVDDKYTISDKLWD 282
>gi|126660265|ref|ZP_01731380.1| putative DNA modification methylase (N.MgoV) [Cyanothece sp.
CCY0110]
gi|126618440|gb|EAZ89194.1| putative DNA modification methylase (N.MgoV) [Cyanothece sp.
CCY0110]
Length = 458
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 7/97 (7%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQP++ G K +D R + ++ L+ P ENV G T K+ E L
Sbjct: 101 PCQPWSVAGKLKGFNDPRGQLWFNVIRLVKDY--QPKAFIFENVKGLTTGKNKDKL-EYL 157
Query: 72 ANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
N +Y+ +++ FGVP +R R F + RK
Sbjct: 158 VNQFEQVNYVVSWKVINSYDFGVPQNRERVFIVGIRK 194
>gi|414073385|ref|YP_006998602.1| Modification methylase ScrFIA [Lactococcus lactis subsp. cremoris
UC509.9]
gi|413973305|gb|AFW90769.1| Modification methylase ScrFIA [Lactococcus lactis subsp. cremoris
UC509.9]
Length = 375
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 18/143 (12%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQ +++ G + D R F +I +I K P +ENV +T D T ++
Sbjct: 134 PCQAFSQAGKKLGFDDTRGTLFFEIARIIKE--KRPKAFLLENVKNLKTHDKGRTFKTIL 191
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLA-KRKPLSFRCQLLNNQLLRSPSPL--- 124
L DY + FG+P +R R + + RK +S N + P+PL
Sbjct: 192 NTLEELDYEVHTALFKARDFGLPQNRERIYIVGFDRKSIS------NYSDFQMPTPLQEK 245
Query: 125 --LGNDDMTVI-TKHDQPDDSWD 144
+GN +V+ K+ D WD
Sbjct: 246 TRVGNILESVVDDKYTISDKLWD 268
>gi|420475342|ref|ZP_14974013.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-21]
gi|393093449|gb|EJB94066.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-21]
Length = 352
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 9/98 (9%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L++L+L+ P + ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFIFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
++ Y+ + IL+ L +GVP R R +
Sbjct: 126 FQRICNAFKERGYILEHAILNALDYGVPQVRERVILVG 163
>gi|420468527|ref|ZP_14967269.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-10]
gi|393088208|gb|EJB88860.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-10]
Length = 352
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 9/93 (9%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L++L+L+ P + ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFIFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPR 96
++ Y+ + IL+ L +GVP R R
Sbjct: 126 FQRICNAFKERGYILEHAILNALDYGVPQVRER 158
>gi|420494407|ref|ZP_14992976.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-16]
gi|393111208|gb|EJC11732.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-16]
Length = 351
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGFETSDTHAK 66
L PPCQ Y+ G +K A F +L++L+L+ P + ENVVG S +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFVFENVVGL-MSMQKGQ 124
Query: 67 MIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
+ + + N+ Y+ + IL+ L +GVP R R + K
Sbjct: 125 LFQQICNAFKERGYILEHAILNALDYGVPQVRERVILVGALK 166
>gi|420485505|ref|ZP_14984123.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-4]
gi|420515995|ref|ZP_15014458.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-4c]
gi|420517700|ref|ZP_15016154.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-4d]
gi|393103640|gb|EJC04203.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-4]
gi|393123199|gb|EJC23668.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-4d]
gi|393124294|gb|EJC24762.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-4c]
Length = 351
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L++L+L+ P + ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
++ Y+ + IL+ L +GVP R R + K
Sbjct: 126 FQRICNAFKERGYILEHAILNALDYGVPQIRERVILVGALK 166
>gi|420446856|ref|ZP_14945751.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-43]
gi|393064566|gb|EJB65401.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-43]
Length = 165
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGFETSDTHAK 66
L PPCQ Y+ G +K A F +L++L+L+ P + ENVVG S +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFVFENVVGL-MSMQKGQ 124
Query: 67 MIEILANS----DYLTQEFILSPLQFGVPYSRPR 96
+ + + N+ Y+ + IL+ L +GVP R R
Sbjct: 125 LFKQICNAFKERGYILEHAILNALDYGVPQIRER 158
>gi|420404369|ref|ZP_14903552.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6261]
gi|393018248|gb|EJB19399.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6261]
Length = 434
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQP++ G ++ D R F +I+ + K P +ENV G T D T + M+
Sbjct: 103 PCQPFSNAGKRRGLDDTRGTLFFEIMRFL--LAKKPRGFLLENVPGLLTHDKGKTFSIML 160
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
L Y +L+ FGV +R R + +
Sbjct: 161 SHLKECGYFVNYKLLNAKDFGVAQNRERLYIVG 193
>gi|385225390|ref|YP_005785315.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori 83]
gi|332673536|gb|AEE70353.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori 83]
Length = 434
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQP++ G ++ D R F +I+ + K P +ENV G T D T + M+
Sbjct: 103 PCQPFSNAGKRRGLDDTRGTLFFEIMRFL--LAKKPRGFLLENVPGLLTHDKGKTFSIML 160
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
L Y +L+ FGV +R R + +
Sbjct: 161 SHLKECGYFVNYKLLNAKDFGVAQNRERLYIVG 193
>gi|407012062|gb|EKE26517.1| hypothetical protein ACD_4C00255G0001 [uncultured bacterium (gcode
4)]
Length = 316
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 6/101 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFET---SDTHAKMI 68
PCQ ++ G QK D R F I+ ++ H K P ++F+ENV + +T M+
Sbjct: 79 PCQSFSIAGYQKWFEDKRWTLFFDIIRIL-HEKKTP-IIFLENVKNLASHAEGETLRIML 136
Query: 69 EILANSDYLTQEFILSPLQFG-VPYSRPRYFCLAKRKPLSF 108
E+L Y +++ +++G VP +R R + + R F
Sbjct: 137 EMLKEEGYYIHHKVMNSMEYGNVPQNRERIYIVWFRDKKKF 177
>gi|420490495|ref|ZP_14989081.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-13]
gi|420524322|ref|ZP_15022732.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-13b]
gi|393109838|gb|EJC10369.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-13]
gi|393133481|gb|EJC33898.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-13b]
Length = 351
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L++L+L+ P + ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
++ Y+ + IL+ L +GVP R R + K
Sbjct: 126 FQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGALK 166
>gi|420432040|ref|ZP_14931059.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-16]
gi|393049633|gb|EJB50599.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-16]
Length = 351
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L++L+L+ P + ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
++ Y+ + IL+ L +GVP R R + K
Sbjct: 126 FQRICNAFKERGYILEHAILNALDYGVPQIRERVILVGALK 166
>gi|414159048|ref|ZP_11415340.1| DNA (cytosine-5-)-methyltransferase [Streptococcus sp. F0441]
gi|410869031|gb|EKS16995.1| DNA (cytosine-5-)-methyltransferase [Streptococcus sp. F0441]
Length = 315
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G ++ D R F +I ++ P LF+ENV G D IL
Sbjct: 75 PCQAFSIAGARRGFEDTRGTLFFEIARFA--SILKPKYLFLENVKGLLNHDKGNTFETIL 132
Query: 72 ANSDYLTQEF---ILSPLQFGVPYSRPRYFCLA 101
+ D L + +L+ FGVP +R R F +
Sbjct: 133 SALDELGYDVEWQVLNSKNFGVPQNRERVFIIG 165
>gi|357390490|ref|YP_004905331.1| putative DNA methyltransferase [Kitasatospora setae KM-6054]
gi|311896967|dbj|BAJ29375.1| putative DNA methyltransferase [Kitasatospora setae KM-6054]
Length = 676
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 21/109 (19%)
Query: 10 SPPCQPYTRQGLQK----------QSSDARA---FSFLKILELIPHTVKPPHMLFVENVV 56
PPCQP++R G K D R S+L+I+E++ P + +ENV
Sbjct: 130 GPPCQPFSRAGRSKIRDLVENHGRNPVDLRKELWRSYLRIIEVVK-----PRAVLMENVP 184
Query: 57 GFETSDTH--AKMIE-ILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK 102
SD + IE L N+ Y TQ ++ ++GVP R R LA+
Sbjct: 185 DMGLSDDFRVVRFIEQRLENAGYATQVRLVDAWRYGVPQHRKRLILLAR 233
>gi|302873674|ref|YP_003842307.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B]
gi|307686602|ref|ZP_07629048.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B]
gi|302576531|gb|ADL50543.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B]
Length = 448
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 4 AHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIP---HTVKPPHMLF--VENVVGF 58
A W PCQ + G Q+ R+ + +I++LI KP ++L V+N++
Sbjct: 67 ADIWCFGFPCQDISVAGKQRGIRGKRSGIYFRIIDLIKGKEEKAKPTYLLIENVKNLLSI 126
Query: 59 ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
A ++ L + Y + +L+ FGVP +R R F +A
Sbjct: 127 NNGFDFATVLLELDQAGYDARWQVLNSKDFGVPQNRERVFIIA 169
>gi|420458340|ref|ZP_14957150.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-26]
gi|393075861|gb|EJB76615.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-26]
Length = 351
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGFETSDTHAK 66
L PPCQ Y+ G +K A F +L++L+L+ P + ENVVG S +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFVFENVVGL-MSMQKGQ 124
Query: 67 MIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
+ + + N+ Y+ + IL+ L +GVP R R + K
Sbjct: 125 LFQQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALK 166
>gi|423241279|ref|ZP_17222392.1| DNA (cytosine-5-)-methyltransferase [Bacteroides dorei CL03T12C01]
gi|392642211|gb|EIY35982.1| DNA (cytosine-5-)-methyltransferase [Bacteroides dorei CL03T12C01]
Length = 380
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 14/116 (12%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKP--PHMLFVENVVGFETSDTHAKM 67
PPCQ +T G K + R K+ ++ + ++ P +ENVVG ++
Sbjct: 100 GPPCQDFTMNGNGKGFNGERG----KMTQVFYNRIRKMKPSFFVMENVVGLLMRKEQKRI 155
Query: 68 IE-ILANS---DYLTQEFILSPLQFGVPYSRPRYFCLAKRK----PLSFRCQLLNN 115
++ +L NS DY IL+ L +GVP R R F + RK PL R ++N
Sbjct: 156 LDTLLLNSICDDYYIDRQILNALYYGVPQYRKRVFIIGIRKDCFTPLVTRTPSIDN 211
>gi|420413687|ref|ZP_14912810.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4099]
gi|420418627|ref|ZP_14917719.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4076]
gi|393028216|gb|EJB29303.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4099]
gi|393033453|gb|EJB34516.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4076]
Length = 434
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQP++ G ++ D R F +I+ + K P +ENV G T D T + M+
Sbjct: 103 PCQPFSNAGKRRGLDDTRGTLFFEIMRFL--LAKKPRGFLLENVPGLLTHDKGKTFSIML 160
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
L Y +L+ FGV +R R + +
Sbjct: 161 SHLKECGYFVNYKLLNAKDFGVAQNRERLYIVG 193
>gi|420449975|ref|ZP_14948841.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-45]
gi|393069292|gb|EJB70090.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-45]
Length = 348
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGFETSDTHAK 66
L PPCQ Y+ G +K A F +L++L+L+ P + ENVVG S +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFVFENVVGL-MSMQKGQ 124
Query: 67 MIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
+ + + N+ Y+ + IL+ L +GVP R R + K
Sbjct: 125 LFQQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALK 166
>gi|385249206|ref|YP_005777425.1| cytosine specific DNA methyltransferase (BSP6IM) [Helicobacter
pylori F57]
gi|387908011|ref|YP_006338345.1| DNA-cytosine methyltransferase [Helicobacter pylori XZ274]
gi|317182001|dbj|BAJ59785.1| cytosine specific DNA methyltransferase (BSP6IM) [Helicobacter
pylori F57]
gi|387572946|gb|AFJ81654.1| DNA-cytosine methyltransferase [Helicobacter pylori XZ274]
Length = 434
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQP++ G ++ D R F +I+ + K P +ENV G T D T + M+
Sbjct: 103 PCQPFSNAGKRRGLDDTRGTLFFEIMRFL--LAKKPRGFLLENVPGLLTHDKGKTFSIML 160
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
L Y +L+ FGV +R R + +
Sbjct: 161 SHLKECGYFVNYKLLNAKDFGVAQNRERLYIVG 193
>gi|212710423|ref|ZP_03318551.1| hypothetical protein PROVALCAL_01485 [Providencia alcalifaciens DSM
30120]
gi|212686843|gb|EEB46371.1| hypothetical protein PROVALCAL_01485 [Providencia alcalifaciens DSM
30120]
Length = 330
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 11/104 (10%)
Query: 10 SPPCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVKPPHMLFVENVVGFETS---DT 63
PPCQ ++ G Q+ +D R F F++ILE K P ENV G E + D
Sbjct: 71 GPPCQSWSEAGAQRGINDKRGQLFFDFIRILE-----AKKPKFFLAENVSGMEHARHKDA 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 107
+ ++ ++ Y +L+ + +GV R R + R L+
Sbjct: 126 LDNIKKMFKDAGYDLYYKMLNAVDYGVAQDRKRVIFVGFRSDLN 169
>gi|421711470|ref|ZP_16150813.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R030b]
gi|407212619|gb|EKE82481.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R030b]
Length = 351
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L++L+L+ P + ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
++ Y+ + IL+ L +GVP R R + K
Sbjct: 126 FQRICNAFKERGYILEHAILNALDYGVPQIRERVILVGALK 166
>gi|148555377|ref|YP_001262959.1| DNA-cytosine methyltransferase [Sphingomonas wittichii RW1]
gi|148500567|gb|ABQ68821.1| DNA-cytosine methyltransferase [Sphingomonas wittichii RW1]
Length = 412
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 64/154 (41%), Gaps = 33/154 (21%)
Query: 10 SPPCQPYTRQGL-----QKQSSDARA---FSFLKILELIPHTVKPPHMLFVENVVGFETS 61
PPCQP+++ G K+ SD RA ++L++LE KP L +ENV G
Sbjct: 84 GPPCQPFSKSGYWASGDAKRLSDRRADTLGAYLRVLE----EAKPKSFL-LENVYGLAYR 138
Query: 62 DTHAKMIEIL---------ANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQL 112
+ IL A + Y +L+ FGVP R R F +A R+ +F+
Sbjct: 139 GKDEGLNRILSGIEEINRRAGTSYKPSWQVLNAASFGVPQLRERVFIVASREGKNFKF-- 196
Query: 113 LNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKL 146
P P G D TV+ + WD L
Sbjct: 197 --------PQPTHGPKD-TVLDGQEPFRTCWDAL 221
>gi|385218742|ref|YP_005780217.1| type II DNA modification (methyltransferase) [Helicobacter pylori
Gambia94/24]
gi|317013900|gb|ADU81336.1| type II DNA modification (methyltransferase) [Helicobacter pylori
Gambia94/24]
Length = 351
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L++L+L+ P + ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
++ Y+ + IL+ L +GVP R R + K
Sbjct: 126 FQRICNAFKERGYILEHAILNALDYGVPQIRERVILVGALK 166
>gi|338210458|ref|YP_004654507.1| DNA-cytosine methyltransferase [Runella slithyformis DSM 19594]
gi|336304273|gb|AEI47375.1| DNA-cytosine methyltransferase [Runella slithyformis DSM 19594]
Length = 348
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 7/101 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G + D R F + ++I K P +F+ENV G D + IL
Sbjct: 95 PCQAFSIAGRRGGFEDTRGTLFFDVADIIRR--KKPKAIFLENVKGLINHDKGQTLKTIL 152
Query: 72 AN-----SDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 107
A ++ + +++ FGVP +R R F + R+ L
Sbjct: 153 ATLREDLGYFVPEPRVMNAKDFGVPQNRERIFIVGFREDLG 193
>gi|209523295|ref|ZP_03271851.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
gi|209496446|gb|EDZ96745.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
Length = 387
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF---ETSDTHAK 66
PPCQ ++ G + D R F FL+ L + +KP +++ +ENV G + +T
Sbjct: 82 GPPCQGFSTIG-SNNNLDKRNFLFLEFLRFVEQ-LKPDYII-IENVTGLLSRKNENTLTS 138
Query: 67 MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 103
++ L N Y +LS +GVP R R L R
Sbjct: 139 ILTCLQNIGYTVDVRVLSAHHYGVPEKRRRTIFLGNR 175
>gi|420466783|ref|ZP_14965540.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-9]
gi|393085181|gb|EJB85869.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-9]
Length = 351
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGFETSDTHAK 66
L PPCQ Y+ G +K A F +L++L+L+ P + ENVVG S +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFVFENVVGL-MSMQKGQ 124
Query: 67 MIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
+ + + N+ Y+ + IL+ L +GVP R R + K
Sbjct: 125 LFQQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALK 166
>gi|172039424|ref|YP_001805925.1| putative site-specific DNA-methyltransferase [Cyanothece sp. ATCC
51142]
gi|354552311|ref|ZP_08971619.1| DNA-cytosine methyltransferase [Cyanothece sp. ATCC 51472]
gi|171700878|gb|ACB53859.1| putative site-specific DNA-methyltransferase [Cyanothece sp. ATCC
51142]
gi|353555633|gb|EHC25021.1| DNA-cytosine methyltransferase [Cyanothece sp. ATCC 51472]
Length = 729
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQP++ G ++ D R F I E+I VK P ++ +ENV + + T +I
Sbjct: 74 PCQPFSICGKREGFKDTRGTLFFHICEIIE--VKKPKVIVLENVKHLIHHQQGKTLETII 131
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
L + YL +L+ FGVP +R R +
Sbjct: 132 YALEDLGYLVDYKLLNAKDFGVPQNRERIIIIG 164
>gi|423066558|ref|ZP_17055348.1| DNA-cytosine methyltransferase [Arthrospira platensis C1]
gi|406711866|gb|EKD07064.1| DNA-cytosine methyltransferase [Arthrospira platensis C1]
Length = 605
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF---ETSDTHAK 66
PPCQ ++ G + D R F FL+ L + +KP +++ +ENV G + +T
Sbjct: 82 GPPCQGFSTIG-SNNNLDKRNFLFLEFLRFVEQ-LKPDYII-IENVTGLLSRKNENTLTS 138
Query: 67 MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 103
++ L N Y +LS +GVP R R L R
Sbjct: 139 ILTCLQNIGYTVDVRVLSAHHYGVPEKRRRTIFLGNR 175
>gi|449881058|ref|ZP_21784249.1| cytosine-specific methyltransferase [Streptococcus mutans SA38]
gi|449927102|ref|ZP_21801080.1| cytosine-specific methyltransferase [Streptococcus mutans 4SM1]
gi|449159934|gb|EMB63229.1| cytosine-specific methyltransferase [Streptococcus mutans 4SM1]
gi|449251942|gb|EMC49937.1| cytosine-specific methyltransferase [Streptococcus mutans SA38]
Length = 408
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQ ++ G +K D R F ++L +I P +F+ENV VG + +T +
Sbjct: 85 PCQAFSIAGYRKGFEDDRGDLFFELLRMIERC--KPKAIFIENVKNMVGHDHGNTFKVIR 142
Query: 69 EILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 101
E L ++Y + +L+ FG +P +R R + +
Sbjct: 143 EALTENNYFIKWKVLNGKDFGNIPQNRERIYIVG 176
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 262 LRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQ 309
+R TP+E N +P DF+ P LS Q Y GNS+ + V+ + +
Sbjct: 275 IRKLTPKETFNAQGYPKDFKIPSELSNGQLYKQAGNSVVVPVIKRIAE 322
>gi|420522621|ref|ZP_15021045.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-11b]
gi|393129578|gb|EJC30012.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-11b]
Length = 326
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L++L+L+ P + ENVVG +
Sbjct: 46 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFVFENVVGLMSMQKGQL 100
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
++ Y+ + IL+ L +GVP R R + K
Sbjct: 101 FQRICNAFKERGYILEHAILNALDYGVPQIRERVILVGIHK 141
>gi|294635767|ref|ZP_06714227.1| C-5 cytosine-specific DNA methylase family protein [Edwardsiella
tarda ATCC 23685]
gi|451964513|ref|ZP_21917777.1| putative cytosine-specific methyltransferase [Edwardsiella tarda
NBRC 105688]
gi|291090867|gb|EFE23428.1| C-5 cytosine-specific DNA methylase family protein [Edwardsiella
tarda ATCC 23685]
gi|451316633|dbj|GAC63139.1| putative cytosine-specific methyltransferase [Edwardsiella tarda
NBRC 105688]
Length = 403
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 23/113 (20%)
Query: 8 LLSPPCQPYTRQGLQKQSSD-------ARAFSFLK-------ILELIPHTVKPPHMLFVE 53
L PPCQ ++ + D R F F+K ++E +P + P H ++
Sbjct: 80 LGGPPCQGFSSHRINDAGKDDPRNALLIRYFDFVKNLRPKVFLVENVPGLLWPRHAEYLN 139
Query: 54 NVVGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 106
N V T A +I+ + Q FIL+ +GVP SR R F LA RK +
Sbjct: 140 NFVAL----TRAHDYQIVGD-----QPFILNARDYGVPQSRKRAFILAVRKDI 183
>gi|218439646|ref|YP_002377975.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7424]
gi|218172374|gb|ACK71107.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7424]
Length = 320
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 46/107 (42%), Gaps = 5/107 (4%)
Query: 5 HAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETS 61
H L PCQP++ G K D R F I ++ K P+ +ENV + +
Sbjct: 80 HLLLAGFPCQPFSICGDLKGFEDTRGTLFFDIARILES--KKPYTFVLENVKQLLVHQQG 137
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 108
T +I+ L Y IL+ L FG+P R R F + P+ F
Sbjct: 138 QTLNVIIKSLQKLGYYVNHKILNALDFGLPQKRERIFIVGCLDPIPF 184
>gi|420443356|ref|ZP_14942284.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-41]
gi|393060863|gb|EJB61732.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-41]
Length = 309
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQ ++ GLQK +D R +++ +I K P +L +ENV V +T ++
Sbjct: 70 PCQAFSIAGLQKGLNDERGAIVMEMFRII--QAKKPQVLLLENVKNLVSHNKGETLKFIL 127
Query: 69 EILANSDYLTQEFILSPLQFG-VPYSRPRYFCLAKRKPLSFRC 110
E L N Y IL+ ++ +P +R R + + ++C
Sbjct: 128 ETLKNLGYFVHYKILNTYEYSTIPQNRERVYIIGFLDKNHYKC 170
>gi|422928020|ref|ZP_16960962.1| DNA (cytosine-5-)-methyltransferase [Streptococcus sanguinis ATCC
29667]
gi|422931016|ref|ZP_16963947.1| DNA (cytosine-5-)-methyltransferase [Streptococcus sanguinis SK340]
gi|339617584|gb|EGQ22206.1| DNA (cytosine-5-)-methyltransferase [Streptococcus sanguinis ATCC
29667]
gi|339620198|gb|EGQ24768.1| DNA (cytosine-5-)-methyltransferase [Streptococcus sanguinis SK340]
Length = 407
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 19/120 (15%)
Query: 10 SPPCQPYTRQGLQKQSSDAR---AFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAK 66
PPCQ ++ G ++Q+ D R S+++I++L+ P MLF ENV GF K
Sbjct: 100 GPPCQGFSMAG-KRQNDDVRNQLMHSYVEIIKLVQ-----PKMLFFENVQGFTVDFKDHK 153
Query: 67 --------MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS--FRCQLLNNQ 116
+I L Y I++ FG+P +R R+ A + F +L NN+
Sbjct: 154 DKKNYSNILISELKRLGYQLDYKIITMSDFGIPQNRKRFILFASKNETYEIFFEELFNNR 213
>gi|291530357|emb|CBK95942.1| DNA-methyltransferase (dcm) [Eubacterium siraeum 70/3]
Length = 317
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 87/223 (39%), Gaps = 38/223 (17%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQP++ G K D R F +I+ + + P ++F+ENV T K ++
Sbjct: 71 PCQPFSVCGKGKGFFDERGNLFFEIMRAVD--ILRPQIIFLENVANL-TEHNGGKTFNVI 127
Query: 72 ANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSP-LLG 126
N DY+ + I +G+P R R + +A R + L P L
Sbjct: 128 HNELVSRDYIIRYLIADACDYGIPQHRTRTYIVAFR-------DFAKSVLFDFPQKQQLQ 180
Query: 127 NDDMTVITKHDQPDDS---------WDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGT 177
VI K + D S + K+ +S D + FS+ G Q ++ G T
Sbjct: 181 KHIFDVIDKRTKADKSFYLDCNSRQYYKMKQSIDDNNQIYRFSDYGIQ-KSKDGICFTLK 239
Query: 178 AAV-----------DDFGAAEETVEVDRCVSIDHFLVPLSLIE 209
A + DDFG + T + C+++ F S +E
Sbjct: 240 ANMGTWYNRVPIIRDDFGIRKITPK--ECLALQGFPKEFSFLE 280
>gi|86360841|ref|YP_472728.1| DNA (cytosine-5-)-methyltransferase [Rhizobium etli CFN 42]
gi|86284943|gb|ABC94001.1| probable DNA (cytosine-5-)-methyltransferase protein [Rhizobium
etli CFN 42]
Length = 504
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 15/111 (13%)
Query: 10 SPPCQPYTRQGLQKQSS----------DARAFSFLKILELIPHTVKPPHMLFVENVVGFE 59
PPCQ + R G K D+RA +++ L + P + +ENV
Sbjct: 102 GPPCQAFARVGRSKLREIAEHPEAFRHDSRARLYIEYLAYVEACA--PLAVVIENVPDML 159
Query: 60 TSDTH---AKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 107
H A++ EILA+ DY+ + +L+ +GVP R R +A RK L+
Sbjct: 160 NHGGHNLAAEIGEILASKDYVVRYTLLNAAFYGVPQMRERMILIAIRKELA 210
>gi|421709865|ref|ZP_16149224.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R018c]
gi|421723116|ref|ZP_16162373.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R056a]
gi|407211310|gb|EKE81179.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R018c]
gi|407225484|gb|EKE95255.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R056a]
Length = 160
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 11/96 (11%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAF-SFLKILELIPHTVKPPHMLFVENVVGFETSDTHAK 66
L PPCQ Y+ G +K A F +L++L+L+ P + ENVVG S +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFVFENVVGL-MSMQKGQ 124
Query: 67 MIEILANS----DYLTQEFILSPLQFGVPYSRPRYF 98
+ + + N+ Y+ + IL+ L +GVP R F
Sbjct: 125 LFQQICNAFKERGYILEHAILNALDYGVPQIREEVF 160
>gi|153854028|ref|ZP_01995361.1| hypothetical protein DORLON_01352 [Dorea longicatena DSM 13814]
gi|149753410|gb|EDM63341.1| DNA (cytosine-5-)-methyltransferase [Dorea longicatena DSM 13814]
Length = 468
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQ ++ G ++ +DAR F +I ++ K P +ENV G + D T ++
Sbjct: 115 PCQAFSIAGKREGFADARGTLFFEIARILE--AKRPSYFILENVPGLLSHDKGRTFCTIL 172
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRC 110
L+ Y + +L+ FGVP +R R + + FRC
Sbjct: 173 STLSELGYHVEWKVLNSKDFGVPQARKRVYIVGY---FDFRC 211
>gi|432395094|ref|ZP_19637896.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE21]
gi|430912198|gb|ELC33430.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE21]
Length = 415
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 12/143 (8%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQ ++ G Q +D R F ++ +I P + +ENV G + D T + ++
Sbjct: 74 PCQAFSYAGKQLGFADTRGTLFFEVERIIKKN--KPKLCLLENVRGLTSHDKGRTFSTIL 131
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK-RKPLSFRC-QLLNNQLLRSPSPLLG 126
+ L + Y + +L+ FGVP +R R + +A +K ++ L + + P G
Sbjct: 132 KSLHDLGYHVEYRLLNTSNFGVPQNRVRIYIIASLKKEVTLTIPNDLGAKDTHNYKPSKG 191
Query: 127 NDDMTVITK-----HDQPDDSWD 144
D +K D PD S+D
Sbjct: 192 GHDFYTESKVSDILEDSPDKSYD 214
>gi|386748699|ref|YP_006221907.1| cytosine specific DNA methyltransferase [Helicobacter cetorum MIT
99-5656]
gi|384554941|gb|AFI06697.1| cytosine specific DNA methyltransferase [Helicobacter cetorum MIT
99-5656]
Length = 355
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 6/105 (5%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIE 69
PPCQ ++ +G D R F FL+ +E++ P + +ENV + + E
Sbjct: 79 GPPCQGFSNKGKNLGLKDPRNFLFLEYIEIVKAI--KPEIFIIENVKNLISCAKGYFLEE 136
Query: 70 ILANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRK-PLSFRC 110
I A L + IL+ +GVP SR R F + R F C
Sbjct: 137 IKAKFHALGYQLSYQILNAKDYGVPQSRERAFIVGARHFSFDFNC 181
>gi|322510870|gb|ADX06184.1| putative C-5 cytosine-specific DNA methyltransferase [Organic Lake
phycodnavirus 1]
Length = 465
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 12/97 (12%)
Query: 12 PCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVKPPHMLFVENVVGFETSD---THA 65
PCQ +++ GL+K D R F++IL LI P + +ENV G T D T
Sbjct: 215 PCQSFSQAGLRKGLDDPRGDLMIKFIEILNLI-----KPKIFMIENVKGLLTHDDGKTIK 269
Query: 66 KMIEIL-ANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
K+IE L N+ Y L ++ VP R R F +
Sbjct: 270 KIIEALNKNNLYNISYKCLDASKYDVPQKRERVFIVG 306
>gi|424782383|ref|ZP_18209230.1| DNA-cytosine methyltransferase [Campylobacter showae CSUNSWCD]
gi|421959703|gb|EKU11311.1| DNA-cytosine methyltransferase [Campylobacter showae CSUNSWCD]
Length = 306
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 13/135 (9%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G QK DAR F +IL + P +LF+ENV + D + +++
Sbjct: 63 PCQAFSIAGYQKGFDDARGTLFFEILSIAKK--HKPKVLFLENVKNLKNHD-NGNTFKVI 119
Query: 72 ANS-----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLG 126
NS Y+ + + S +P +R R F +A K ++ N + P P+
Sbjct: 120 KNSLESIGYYVYSDVLNSATHANIPQNRERIFIVAFNKN-----KVKNYEKFTFPKPIKL 174
Query: 127 NDDMTVITKHDQPDD 141
+ I ++ DD
Sbjct: 175 TKKIKEIILKEKQDD 189
>gi|208434405|ref|YP_002266071.1| type II DNA modification enzyme [Helicobacter pylori G27]
gi|208432334|gb|ACI27205.1| type II DNA modification enzyme [Helicobacter pylori G27]
Length = 348
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGFETSDTHAK 66
L PPCQ Y+ G +K A F +L++L+L+ P + ENVVG S +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFVFENVVGL-MSMQKGQ 124
Query: 67 MIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
+ + + N+ Y+ + IL+ L +GVP R R + K
Sbjct: 125 LFQQICNAFKERGYVLEHAILNALDYGVPQIRERVILVGTLK 166
>gi|450121904|ref|ZP_21866494.1| cytosine-specific methyltransferase [Streptococcus mutans ST6]
gi|449228643|gb|EMC28002.1| cytosine-specific methyltransferase [Streptococcus mutans ST6]
Length = 408
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQ ++ G +K D R F ++L +I P +F+ENV VG + +T +
Sbjct: 85 PCQAFSIAGYRKGFEDDRGDLFFELLRMIEKC--KPKAIFIENVKNMVGHDHGNTFKVIR 142
Query: 69 EILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 101
E L ++Y + +L+ FG +P +R R + +
Sbjct: 143 EALTENNYFIKWKVLNGKDFGNIPQNRERIYIVG 176
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 262 LRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQ 309
+R TP+E N +P DF+ P LS Q Y GNS+ + V+ + +
Sbjct: 275 IRKLTPKETFNAQGYPKDFKIPSELSNGQLYKQAGNSVVVPVIKRIAE 322
>gi|89055380|ref|YP_510831.1| DNA-cytosine methyltransferase [Jannaschia sp. CCS1]
gi|88864929|gb|ABD55806.1| DNA-cytosine methyltransferase [Jannaschia sp. CCS1]
Length = 373
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 117/321 (36%), Gaps = 45/321 (14%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIE 69
PPCQ Y+ Q+ DARA F + L ++ P + +ENV G + +
Sbjct: 79 GPPCQAYSVYNHQRGMHDARASLFREYLRIVDGLR--PEWIVMENVTGIYSIANGEAVRA 136
Query: 70 I---LANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR--KPLSFRCQLLNNQLLRSPSPL 124
I A Y ++ +L +GVP R R + R P+S P P
Sbjct: 137 IKAEFAALGYAVEDAVLRAEDYGVPQERRRVVFIGNRVGAPISH------------PEPT 184
Query: 125 LGNDDMTVITKHDQPDDSWDKLLESCDPVE-RFLEFSNSGDQVNTETGFLSTGTAAVDDF 183
G TK L +P + + S Q ++ G A
Sbjct: 185 HGPGRANPFTKIRDAIGDLPPLDNGENPGRVAYADARPSKYQRQMRGNAITVGNHAAPRL 244
Query: 184 GAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDI---VYPDSKRCCCFTKSYYRYVKGT- 239
G V +DR L I GS DI + P+ + + RY + T
Sbjct: 245 G----KVNMDR----------LPYIPPGGSWRDIPHDLLPEGMKRAKRSDHTKRYGRMTW 290
Query: 240 GSLLATVQPK-NKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNS 298
L TV K + + + + R + RE A L +FP F+F S ++Y +GN+
Sbjct: 291 DGLSCTVLTKCDIHWGAYIHPEQDRAISVREAARLQAFPDWFEFAG--SKTEQYVQVGNA 348
Query: 299 ----LSIAVVAPLLQYLFAQA 315
L AV L+Q + AQ
Sbjct: 349 VPPLLGKAVGDHLMQLMAAQG 369
>gi|409993543|ref|ZP_11276681.1| cytosine-specific DNA methylase [Arthrospira platensis str. Paraca]
gi|79835459|gb|ABB52089.1| Mod [Arthrospira platensis]
gi|409935626|gb|EKN77152.1| cytosine-specific DNA methylase [Arthrospira platensis str. Paraca]
Length = 390
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF---ETSDTHAK 66
PPCQ ++ G + D R F FL+ L + +KP +++ +ENV G + +T
Sbjct: 81 GPPCQGFSTIGTNN-NLDKRNFLFLEFLRFVEQ-LKPDYII-IENVTGLLSRKNENTLTS 137
Query: 67 MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 103
++ L N Y +LS +GVP R R L R
Sbjct: 138 ILTCLQNIGYTVDVRVLSAHHYGVPEKRRRTIFLGNR 174
>gi|452206973|ref|YP_007487095.1| site-specific DNA-methyltransferase (cytosine-specific)
[Natronomonas moolapensis 8.8.11]
gi|452083073|emb|CCQ36357.1| site-specific DNA-methyltransferase (cytosine-specific)
[Natronomonas moolapensis 8.8.11]
Length = 370
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 9/112 (8%)
Query: 12 PCQPYTRQGLQKQSS--DARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIE 69
PCQPY+ G K + D + + LK ++ I V+ P ++ ENV D + + ++
Sbjct: 81 PCQPYSTMGQSKNKTHQDHQKWGLLKDIKKISEYVE-PDIIITENVPQVRKDDVYDEFVQ 139
Query: 70 ILANSDYLTQE----FILSPLQFGVPYSRPRYFCLA-KRKPLSFRCQLLNNQ 116
L + Y + + P ++G+P +R R+ +A K P+S L N+
Sbjct: 140 TLKDLGYHVNDDENKKVYCP-EYGIPQNRKRWVMMASKEGPISLPDPLYENE 190
>gi|420471951|ref|ZP_14970647.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-18]
gi|393091306|gb|EJB91938.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-18]
Length = 348
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L++L+L+ P + ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
++ Y+ + IL+ L +GVP R R + K
Sbjct: 126 FKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALK 166
>gi|302671270|ref|YP_003831230.1| DNA-cytosine methyltransferase [Butyrivibrio proteoclasticus B316]
gi|302395743|gb|ADL34648.1| DNA-cytosine methyltransferase [Butyrivibrio proteoclasticus B316]
Length = 579
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 44/105 (41%), Gaps = 5/105 (4%)
Query: 11 PPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKM 67
PCQ ++ G Q+ D R F + LI P + ENV + D T KM
Sbjct: 281 SPCQSFSFVGKQRGLDDTRGTLFYEYARLIDEI--RPKVFIYENVRAVTSHDGGKTWKKM 338
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQL 112
++ + DY +L+ +GVP +R R F + R L +
Sbjct: 339 QQVFSELDYSFSWKVLNARDYGVPQNRERLFVVGFRNDLDLDVEF 383
>gi|420414874|ref|ZP_14913990.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4053]
gi|393033841|gb|EJB34902.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4053]
Length = 160
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 11/96 (11%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAF-SFLKILELIPHTVKPPHMLFVENVVGFETSDTHAK 66
L PPCQ Y+ G +K A F +L++L+L VKP +F ENVVG S +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDL----VKPKIFVF-ENVVGL-MSMQKGQ 124
Query: 67 MIEILANS----DYLTQEFILSPLQFGVPYSRPRYF 98
+ + + N+ Y+ + IL+ L +GVP R F
Sbjct: 125 LFKQICNAFKERGYILENAILNALDYGVPQIREEVF 160
>gi|291571391|dbj|BAI93663.1| cytosine-specific methyltransferase [Arthrospira platensis NIES-39]
Length = 390
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF---ETSDTHAK 66
PPCQ ++ G + D R F FL+ L + +KP +++ +ENV G + +T
Sbjct: 81 GPPCQGFSTIGTNN-NLDKRNFLFLEFLRFVEQ-LKPDYII-IENVTGLLSRKNENTLTS 137
Query: 67 MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 103
++ L N Y +LS +GVP R R L R
Sbjct: 138 ILTCLQNIGYTVDVRVLSAHHYGVPEKRRRTIFLGNR 174
>gi|254409526|ref|ZP_05023307.1| DNA-cytosine methyltransferase superfamily [Coleofasciculus
chthonoplastes PCC 7420]
gi|196183523|gb|EDX78506.1| DNA-cytosine methyltransferase superfamily [Coleofasciculus
chthonoplastes PCC 7420]
Length = 437
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEI- 70
PCQ ++ G + D R F +IL LI T KP ++F ENV G + D + I
Sbjct: 76 PCQSFSYAGKKAGFGDTRGTLFFEILRLI-DTCKPKALIF-ENVRGIYSHDRGRTLETIK 133
Query: 71 --LANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
L + Y F+L+ FG+P +R R + +
Sbjct: 134 HELKSRGYSFDTFLLNSAHFGLPQNRVRLYMVG 166
>gi|418088332|ref|ZP_12725497.1| modification methylase HhaI domain protein [Streptococcus
pneumoniae GA47033]
gi|418201844|ref|ZP_12838275.1| modification methylase HhaI domain protein [Streptococcus
pneumoniae GA52306]
gi|419454963|ref|ZP_13994924.1| modification methylase HhaI domain protein [Streptococcus
pneumoniae EU-NP04]
gi|421285192|ref|ZP_15735969.1| cytosine-specific methyltransferase [Streptococcus pneumoniae
GA60190]
gi|421306757|ref|ZP_15757403.1| cytosine-specific methyltransferase [Streptococcus pneumoniae
GA60132]
gi|353756009|gb|EHD36612.1| modification methylase HhaI domain protein [Streptococcus
pneumoniae GA47033]
gi|353868526|gb|EHE48412.1| modification methylase HhaI domain protein [Streptococcus
pneumoniae GA52306]
gi|379630031|gb|EHZ94622.1| modification methylase HhaI domain protein [Streptococcus
pneumoniae EU-NP04]
gi|395887171|gb|EJG98186.1| cytosine-specific methyltransferase [Streptococcus pneumoniae
GA60190]
gi|395908720|gb|EJH19597.1| cytosine-specific methyltransferase [Streptococcus pneumoniae
GA60132]
Length = 406
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQ ++ G +K D R F ++L +I + P +F+ENV VG + +T +
Sbjct: 86 PCQAFSIAGYRKGFDDDRGDLFFELLRMIEG--RKPRAIFIENVKNMVGHDHGNTFKVIR 143
Query: 69 EILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 101
E L ++Y + +L+ +G +P +R R + +
Sbjct: 144 EALTENNYFIKWKVLNGKDYGNIPQNRERIYIVG 177
>gi|315222611|ref|ZP_07864500.1| DNA (cytosine-5-)-methyltransferase [Streptococcus anginosus F0211]
gi|315188297|gb|EFU22023.1| DNA (cytosine-5-)-methyltransferase [Streptococcus anginosus F0211]
Length = 317
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Query: 12 PCQPYTRQGLQK---QSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMI 68
PCQ ++R GL+K + S R+ + + +I P ++ ENV G + A
Sbjct: 76 PCQDFSRSGLKKGGEKGSGTRSSLLFETIRIIEEMKIRPKIVLWENVKGVLDKNMRASFF 135
Query: 69 EILANSDYLTQEF---ILSPLQFGVPYSRPRYFCLA 101
L + L E IL+ + FG+P R R F ++
Sbjct: 136 HYLKEMERLGYENKYEILNAMDFGIPQKRERIFVVS 171
>gi|376259604|ref|YP_005146324.1| DNA-methyltransferase Dcm [Clostridium sp. BNL1100]
gi|373943598|gb|AEY64519.1| DNA-methyltransferase Dcm [Clostridium sp. BNL1100]
Length = 385
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 56/139 (40%), Gaps = 12/139 (8%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ GL+K S R +L++ +I H P ENV G + + IE++
Sbjct: 136 PCQDFSIAGLRKGLSSERGQLYLEMKRVIEHC--QPLAFIAENVEGLTNINGSNETIELI 193
Query: 72 ----ANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGN 127
A Y + +GVP +R R F + R+ L L P +
Sbjct: 194 KEDFAKCGYNVTYNLFHATDYGVPQTRKRVFIIGIREDLH------KTIYLPKPDRDQFS 247
Query: 128 DDMTVITKHDQPDDSWDKL 146
D +T + DD W KL
Sbjct: 248 KDRPWMTAKEAIDDLWGKL 266
>gi|433639960|ref|YP_007285720.1| site-specific DNA methylase [Halovivax ruber XH-70]
gi|433291764|gb|AGB17587.1| site-specific DNA methylase [Halovivax ruber XH-70]
Length = 371
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 10/105 (9%)
Query: 12 PCQPYTRQGLQKQSS--DARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD-THAKMI 68
PCQPY+ G K+S D + + L + I V P ++ ENV+ + D + I
Sbjct: 81 PCQPYSTMGHSKESGHEDHQKWGLLNEVSRIAEYVD-PDVVVTENVLQVKQEDGVYDAFI 139
Query: 69 EILANSDYL----TQEFILSPLQFGVPYSRPRYFCLA-KRKPLSF 108
E L + DY + + P ++G+P +R R+ +A KR PLS
Sbjct: 140 ESLESQDYHINSDENKNVYCP-EYGIPQNRKRWVVMASKRGPLSL 183
>gi|387760813|ref|YP_006067790.1| DNA methylase [Streptococcus salivarius 57.I]
gi|339291580|gb|AEJ52927.1| DNA methylase [Streptococcus salivarius 57.I]
Length = 373
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQ ++ G +K D R F ++L +I + P +F+ENV VG + +T +
Sbjct: 49 PCQAFSIAGYRKGFDDDRGDLFFELLRMIEG--RKPRAIFIENVKNMVGHDHGNTFKVIR 106
Query: 69 EILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 101
E L ++Y + +L+ +G +P +R R + +
Sbjct: 107 EALTENNYFIKWKVLNGKDYGNIPQNRERIYIVG 140
>gi|323650698|gb|ADX97433.1| M1.BspACI [Psychrobacillus psychrodurans]
Length = 320
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQP++ G + D R F + +I K P +ENV G + D T ++
Sbjct: 72 PCQPFSIAGKRLGFEDTRGTLFFDVARIIKD--KRPKAFLLENVAGITSHDGGKTLDTIL 129
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
L+ Y + +++ +GVP +R R++C+
Sbjct: 130 NTLSELGYEREWKLMNAKYYGVPQNRNRWYCVG 162
>gi|421714623|ref|ZP_16153944.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R036d]
gi|407218308|gb|EKE88137.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R036d]
Length = 351
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGFETSDTHAK 66
L PPCQ Y+ G +K A F +L++L+L+ P + ENVVG S +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFVFENVVGL-MSMQKGQ 124
Query: 67 MIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLA 101
+ + + N+ Y+ + IL+ L +GVP R R +
Sbjct: 125 LFQQICNAFKERGYILEHAILNALDYGVPQIRERVILVG 163
>gi|420482042|ref|ZP_14980679.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-2]
gi|420512466|ref|ZP_15010949.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-2b]
gi|393099276|gb|EJB99857.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-2]
gi|393157529|gb|EJC57790.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-2b]
Length = 351
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGFETSDTHAK 66
L PPCQ Y+ G +K A F +L++L+L+ P + ENVVG S +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFVFENVVGL-MSMQKGQ 124
Query: 67 MIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLA 101
+ + + N+ Y+ + IL+ L +GVP R R +
Sbjct: 125 LFQQICNAFKERGYILEHAILNALDYGVPQIRERVILVG 163
>gi|309789605|ref|ZP_07684186.1| C-5 cytosine-specific DNA methylase [Oscillochloris trichoides
DG-6]
gi|308228341|gb|EFO81988.1| C-5 cytosine-specific DNA methylase [Oscillochloris trichoides DG6]
Length = 342
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 9/109 (8%)
Query: 4 AHAWLLSPPCQPYTRQGLQKQSSDAR-AFS-FLKILELIPHTVKPPHMLFVENVVG--FE 59
A + PPCQP++ G Q+ +D+R F F+K +E V+P +F ENV G ++
Sbjct: 79 ADVVIGGPPCQPFSVGGYQRGLADSRDGFPIFIKAIE----NVRPKIWIF-ENVRGLMYQ 133
Query: 60 TSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 108
++ L + Y+ IL+ + +GVP +R R + + SF
Sbjct: 134 NKRYLEAIMHHLEDLGYIIDAKILNAVHYGVPQNRERLIVVGHKGGFSF 182
>gi|339321213|ref|YP_004683735.1| adenine-specific DNA-methyltransferase [Mycoplasma bovis Hubei-1]
gi|392430292|ref|YP_006471337.1| DNA methyltransferase [Mycoplasma bovis HB0801]
gi|338227338|gb|AEI90400.1| adenine-specific DNA-methyltransferase [Mycoplasma bovis Hubei-1]
Length = 593
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 12/105 (11%)
Query: 11 PPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS------DTH 64
PPCQ ++ +G ++ D R F FL+ L+++ P + +ENV + D
Sbjct: 81 PPCQGFSNKGKKQGLDDPRNFLFLEYLDIVEKV--SPELFIIENVKTMLIAVKGYFIDQI 138
Query: 65 AKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA-KRKPLSF 108
+ IE++ Y +L+ FGVP +R R +A K K +S
Sbjct: 139 VEKIEMMG---YKISYGVLNAKDFGVPQNRARAIIIAHKEKTISL 180
>gi|428301089|ref|YP_007139395.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 6303]
gi|428237633|gb|AFZ03423.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 6303]
Length = 326
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 10 SPPCQPYTRQGLQKQSSD-ARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMI 68
PPCQ ++ G K++ D R + E++ P +ENV G++ + +++++
Sbjct: 83 GPPCQDFSSAG--KRNEDLGRGDLSISFAEIV--ISNRPKWFLMENVEGYKKTQKYSQIV 138
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK 102
+ + Y E I+ GVP +R RY C+ K
Sbjct: 139 NMFRANSYGLTETIIKASLCGVPQNRKRYICIGK 172
>gi|108562885|ref|YP_627201.1| type II DNA modification enzyme [Helicobacter pylori HPAG1]
gi|107836658|gb|ABF84527.1| type II DNA modification enzyme [Helicobacter pylori HPAG1]
Length = 160
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 11/96 (11%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAF-SFLKILELIPHTVKPPHMLFVENVVGFETSDTHAK 66
L PPCQ Y+ G +K A F +L++L+L+ P + ENVVG S +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFVFENVVGL-MSMQKGQ 124
Query: 67 MIEILANS----DYLTQEFILSPLQFGVPYSRPRYF 98
+ + + N+ Y+ + IL+ L +GVP R F
Sbjct: 125 LFQQICNAFKERGYILEHAILNALDYGVPQIREEVF 160
>gi|385262628|ref|ZP_10040731.1| modification methylase HhaI family protein [Streptococcus sp.
SK643]
gi|385189941|gb|EIF37392.1| modification methylase HhaI family protein [Streptococcus sp.
SK643]
Length = 406
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQ ++ G +K D R F ++L +I + P +F+ENV VG + +T +
Sbjct: 86 PCQAFSIAGYRKGFDDDRGDLFFELLRMIEG--RKPRAIFIENVKNMVGHDHGNTFKVIR 143
Query: 69 EILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 101
E L ++Y + +L+ +G +P +R R + +
Sbjct: 144 EALTENNYFIKWKVLNGKDYGNIPQNRERIYIVG 177
>gi|428219918|ref|YP_007083390.1| DNA-cytosine methyltransferase [Pseudanabaena sp. PCC 7367]
gi|427992261|gb|AFY71954.1| DNA-cytosine methyltransferase [Pseudanabaena sp. PCC 7367]
Length = 409
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIE 69
PPCQ ++ G Q+ D R + L I P M+ +ENV T ++ +
Sbjct: 75 GPPCQSFSYAGNQRGLDDRRGQLVYETLNTIEQV--QPKMVLIENVKHLSTINSGKVLKA 132
Query: 70 ILA---NSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
IL + Y TQ IL+ +GV +R R LA RK
Sbjct: 133 ILGRLHSLRYRTQWQILNANDYGVAQNRQRLIILATRK 170
>gi|127464|sp|P11408.1|MTM1_MORSP RecName: Full=Modification methylase MspI; Short=M.MspI; AltName:
Full=Cytosine-specific methyltransferase MspI
gi|44539|emb|CAA32393.1| unnamed protein product [Moraxella sp.]
Length = 418
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 12 PCQPYT----RQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---TH 64
PCQP++ R+G + + ++I+E T K P +LF+ENV G D T
Sbjct: 173 PCQPFSHIGKREGFEHPTQGTMFHEIVRIIE----TKKTP-VLFLENVPGLINHDDGNTL 227
Query: 65 AKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
+IE L + Y +L FG+P R R++ +A
Sbjct: 228 KVIIETLEDMGYKVHHTVLDASHFGIPQKRKRFYLVA 264
>gi|419799142|ref|ZP_14324510.1| putative DNA (cytosine-5-)-methyltransferase [Streptococcus
parasanguinis F0449]
gi|385698682|gb|EIG29029.1| putative DNA (cytosine-5-)-methyltransferase [Streptococcus
parasanguinis F0449]
Length = 406
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQ ++ G +K D R F ++L +I + P +F+ENV VG + +T +
Sbjct: 86 PCQAFSIAGYRKGFDDDRGDLFFELLRMIEG--RKPRAIFIENVKNMVGHDHGNTFKVIR 143
Query: 69 EILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 101
E L ++Y + +L+ +G +P +R R + +
Sbjct: 144 EALTENNYFIKWKVLNGKDYGNIPQNRERIYIVG 177
>gi|383480314|ref|YP_005389208.1| cytosine-specific methyltransferase [Streptococcus pyogenes
MGAS15252]
gi|383494296|ref|YP_005411972.1| cytosine-specific methyltransferase [Streptococcus pyogenes
MGAS1882]
gi|378928304|gb|AFC66510.1| cytosine-specific methyltransferase [Streptococcus pyogenes
MGAS15252]
gi|378930023|gb|AFC68440.1| cytosine-specific methyltransferase [Streptococcus pyogenes
MGAS1882]
Length = 395
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 17/105 (16%)
Query: 10 SPPCQPYTRQGLQKQSSDAR---AFSFLKILELIPHTVKPPHMLFVENVVGF-------- 58
PPCQ ++ G +++++D R S++++++L+ P MLF ENV GF
Sbjct: 86 GPPCQGFSIAG-KRENNDIRNQLMHSYIELVKLVD-----PQMLFFENVQGFTIDFRENG 139
Query: 59 ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 103
+ + A + E L Y I++ +FG+P +R R+ A +
Sbjct: 140 KRKNYSAILAEDLKKLGYKINSQIVTMSEFGIPQNRKRFILFASK 184
>gi|365960575|ref|YP_004942142.1| DNA-cytosine methyltransferase [Flavobacterium columnare ATCC
49512]
gi|365737256|gb|AEW86349.1| DNA-cytosine methyltransferase [Flavobacterium columnare ATCC
49512]
Length = 343
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 47/108 (43%), Gaps = 13/108 (12%)
Query: 10 SPPCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
PPCQ ++ G K +D R F F++ILE K P ENV G S+
Sbjct: 69 GPPCQSWSEAGALKGINDKRGQLFFDFIRILE-----AKQPKFFLAENVSGMLLGRHSEA 123
Query: 64 HAKMIEILANS--DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 109
+ E+ N+ Y +L+ + VP R R F + RK L F+
Sbjct: 124 LKNIQELFRNAGIGYELSFEMLNASDYDVPQDRKRVFFIGIRKDLKFK 171
>gi|396578258|gb|AFM52076.2| DNA methyltransferase [Mycoplasma bovis HB0801]
Length = 594
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 12/105 (11%)
Query: 11 PPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS------DTH 64
PPCQ ++ +G ++ D R F FL+ L+++ P + +ENV + D
Sbjct: 82 PPCQGFSNKGKKQGLDDPRNFLFLEYLDIVEKV--SPELFIIENVKTMLIAVKGYFIDQI 139
Query: 65 AKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA-KRKPLSF 108
+ IE++ Y +L+ FGVP +R R +A K K +S
Sbjct: 140 VEKIEMMG---YKISYGVLNAKDFGVPQNRARAIIIAHKEKTISL 181
>gi|322392562|ref|ZP_08066022.1| DNA methylase [Streptococcus peroris ATCC 700780]
gi|321144554|gb|EFX39955.1| DNA methylase [Streptococcus peroris ATCC 700780]
Length = 406
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQ ++ G +K D R F ++L +I + P +F+ENV VG + +T +
Sbjct: 86 PCQAFSIAGYRKGFDDDRGDLFFELLRMIEG--RKPRAIFIENVKNMVGHDHGNTFKVIR 143
Query: 69 EILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 101
E L ++Y + +L+ +G +P +R R + +
Sbjct: 144 EALTENNYFIKWKVLNGKDYGNIPQNRERIYIVG 177
>gi|385220298|ref|YP_005781770.1| type II DNA modification [Helicobacter pylori India7]
gi|317009105|gb|ADU79685.1| type II DNA modification [Helicobacter pylori India7]
Length = 348
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGFETSDTHAK 66
L PPCQ Y+ G +K A F +L++L+L+ P + ENVVG S +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFVFENVVGL-MSMQKGQ 124
Query: 67 MIEILANS----DYLTQEFILSPLQFGVPYSRPR 96
+ + + N+ Y+ + IL+ L +GVP R R
Sbjct: 125 LFQQICNAFKERGYILEHAILNALDYGVPQIRER 158
>gi|420421857|ref|ZP_14920935.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4110]
gi|393038375|gb|EJB39409.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4110]
Length = 188
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGFETSDTHAK 66
L PPCQ Y+ G +K A F +L++L+L+ P + ENVVG S +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFVFENVVGL-MSMQKGQ 124
Query: 67 MIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
+ + + N+ Y+ + IL+ L +GVP R R + K
Sbjct: 125 LFQQICNAFKERGYILEHAILNALDYGVPQIRERVILVGTLK 166
>gi|443657878|ref|ZP_21131993.1| DNA-cytosine methyltransferase family protein [Microcystis
aeruginosa DIANCHI905]
gi|159029640|emb|CAO87718.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443333088|gb|ELS47664.1| DNA-cytosine methyltransferase family protein [Microcystis
aeruginosa DIANCHI905]
Length = 306
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 3/103 (2%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
Y + SPPCQ ++ G ++ RA L E++ T P +ENV E S
Sbjct: 63 YNPEIIVGSPPCQDFSSAG-KRDEGLGRANLTLTFAEIV--TRLTPQWFVMENVARIEKS 119
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
+ +I + Y E +++ GVP +R RYF + K K
Sbjct: 120 KILIQAKQIFKSHGYGLTEKVINSCYCGVPQTRKRYFMIGKMK 162
>gi|306824635|ref|ZP_07457980.1| DNA methylase [Streptococcus sp. oral taxon 071 str. 73H25AP]
gi|304433203|gb|EFM36174.1| DNA methylase [Streptococcus sp. oral taxon 071 str. 73H25AP]
Length = 410
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQ ++ G +K D R F ++L +I + P +F+ENV VG + +T +
Sbjct: 86 PCQAFSIAGYRKGFDDDRGDLFFELLRMIEG--RKPRAIFIENVKNMVGHDHGNTFKVIR 143
Query: 69 EILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 101
E L ++Y + +L+ +G +P +R R + +
Sbjct: 144 EALTENNYFIKWKVLNGKDYGNIPQNRERIYIVG 177
>gi|283834737|ref|ZP_06354478.1| modification methylase HgiDII [Citrobacter youngae ATCC 29220]
gi|291068977|gb|EFE07086.1| modification methylase HgiDII [Citrobacter youngae ATCC 29220]
Length = 351
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFET-----SDTHAK 66
PCQP++ Q ++ S+D R S L + +P + +F+ENV G ++ + A
Sbjct: 79 PCQPFSSQNKKRDSADTRR-SLLSETKRFIRAFRPKY-IFIENVPGIQSVKLTENGPFAD 136
Query: 67 MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK 102
+ L DY + ++S +GVP R R LAK
Sbjct: 137 FLSFLTRFDYQYEYHVISSEFYGVPQQRKRLVVLAK 172
>gi|166368724|ref|YP_001660997.1| cytosine-specific methyltransferase [Microcystis aeruginosa
NIES-843]
gi|166091097|dbj|BAG05805.1| cytosine-specific methyltransferase [Microcystis aeruginosa
NIES-843]
Length = 189
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 3/103 (2%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
Y + SPPCQ ++ G ++ RA L E++ T P +ENV E S
Sbjct: 63 YNPEIIVGSPPCQDFSSAG-KRDEGLGRANLTLTFAEIV--TGVSPQWFVMENVDRIEKS 119
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
+ +I + Y E +++ GVP +R RYF + K K
Sbjct: 120 KILTQAKQIFKSHGYGLTEKVINSCYCGVPQTRKRYFLIGKMK 162
>gi|126740127|ref|ZP_01755817.1| DNA modification methylase M.NGOI [Roseobacter sp. SK209-2-6]
gi|126718946|gb|EBA15658.1| DNA modification methylase M.NGOI [Roseobacter sp. SK209-2-6]
Length = 319
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 6/99 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS---DTHAKMI 68
PC P++ G Q D R F +E++ T P + +ENV GF + D K+
Sbjct: 74 PCPPFSVAGKQLGEKDERNL-FDDAIEIVDATR--PRAVMIENVRGFLDAVFHDYREKLK 130
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 107
+ L Y T +L+ +GVP RPR +A RK S
Sbjct: 131 KQLTKLGYETDWRLLNASDYGVPQLRPRVAIVALRKEFS 169
>gi|422875785|ref|ZP_16922255.1| DNA methylase [Streptococcus sanguinis SK1056]
gi|332362221|gb|EGJ40021.1| DNA methylase [Streptococcus sanguinis SK1056]
Length = 412
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQ ++ G +K D R F ++L +I + P +F+ENV VG + +T +
Sbjct: 92 PCQAFSIAGYRKGFDDDRGDLFFELLRMIEW--RKPRAIFIENVKNMVGHDHGNTFKVIR 149
Query: 69 EILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 101
E L ++Y + +L+ +G +P +R R + +
Sbjct: 150 EALTENNYFIKWKVLNGKDYGNIPQNRERIYIVG 183
>gi|262201418|ref|YP_003272626.1| DNA-cytosine methyltransferase [Gordonia bronchialis DSM 43247]
gi|262084765|gb|ACY20733.1| DNA-cytosine methyltransferase [Gordonia bronchialis DSM 43247]
Length = 342
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM---I 68
PCQP++RQ + ++D R + + P ++ +ENV G + + +
Sbjct: 82 PCQPFSRQNGNRSANDPRRNLLREFQRFV--LALHPDLVVIENVPGLQLQSRKGPLDSFL 139
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 103
++ Y +L L+FGVP R R LA R
Sbjct: 140 RAISRDGYAVNVRVLRALEFGVPQERRRLVVLASR 174
>gi|385221953|ref|YP_005771086.1| type II DNA modification (methyltransferase) [Helicobacter pylori
SouthAfrica7]
gi|317010732|gb|ADU84479.1| type II DNA modification (methyltransferase) [Helicobacter pylori
SouthAfrica7]
Length = 348
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 9/93 (9%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L++L+L+ P + ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPR 96
++ Y+ + IL+ L +GVP R R
Sbjct: 126 FKQICNAFKERGYILEHAILNALDYGVPQMRER 158
>gi|433448430|ref|ZP_20411362.1| DNA methylase [Weissella ceti NC36]
gi|429539901|gb|ELA07935.1| DNA methylase [Weissella ceti NC36]
Length = 306
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 110/309 (35%), Gaps = 84/309 (27%)
Query: 5 HAWLLSP-PCQPYTRQGLQKQSSDA-RAFSFLKILELIPHTVKPPHMLFVENVVGFETSD 62
H LL+ PCQP++ G ++ A + F +L +I H P M +ENV G T D
Sbjct: 65 HDVLLAGFPCQPFSSIGKREGFMHATQGTLFFDVLRIINH--HQPKMFLLENVQGLLTHD 122
Query: 63 THAKMIEILANSD---YLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLR 119
M ILA+ D Y +L FG+P R R + K L+
Sbjct: 123 KGNTMKVILASLDEAGYDVSYKVLDAQNFGLPQVRKRVMIVGFHKDLN------------ 170
Query: 120 SPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAA 179
IT D P+ K+ PV LE + G
Sbjct: 171 -------------ITNFDIPEGDNKKV-----PVGSILESNPDG---------------- 196
Query: 180 VDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSK-RCCCFTKSYYRYVKG 238
SI + L L ++ I+ +S + SY++ +
Sbjct: 197 ----------------YSISNRLQESYLFKKDDGRPQIIDKESDIQVKTLVASYHKIQRL 240
Query: 239 TGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNS 298
TG+ + KG E +R + EV + FP DF P +S Q Y GNS
Sbjct: 241 TGTFV-------KG-----GETGIRLLSQLEVKRIMGFPDDFVVP--VSRTQMYRQFGNS 286
Query: 299 LSIAVVAPL 307
+++ ++ +
Sbjct: 287 VAVPMIKAV 295
>gi|424796628|ref|ZP_18222329.1| Modification methylase FnuDI [Xanthomonas translucens pv. graminis
ART-Xtg29]
gi|422794854|gb|EKU23656.1| Modification methylase FnuDI [Xanthomonas translucens pv. graminis
ART-Xtg29]
Length = 334
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Query: 10 SPPCQPYTRQGLQKQSSDARAF--SFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
PPCQP++ GL+ ++DAR F+++L+ + P ENV G T + +
Sbjct: 54 GPPCQPFSTGGLRLGTADARNMFPEFIRVLKEV-----QPAAFLAENVPGLATRNRVQYL 108
Query: 68 IEILANSDYL---TQEFILSPLQFGVPYSRPRYFCLAKRK 104
E+L L ++S +GVP R R + RK
Sbjct: 109 AELLNEFKELGFNVSWHVVSAADYGVPQKRRRLIIVGMRK 148
>gi|428773133|ref|YP_007164921.1| DNA-cytosine methyltransferase [Cyanobacterium stanieri PCC 7202]
gi|428687412|gb|AFZ47272.1| DNA-cytosine methyltransferase [Cyanobacterium stanieri PCC 7202]
Length = 340
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 7/100 (7%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G Q +D R F + ++ + P + +ENV F D H + I+
Sbjct: 75 PCQAFSISGKQLGFNDTRGTLFFDVARIVNY--HQPKFILLENVKNFARHD-HGNALNIV 131
Query: 72 ANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 107
N+ Y +L+ FGVP R R + +A RK L
Sbjct: 132 VNTLDEIGYKVYYQVLNSSYFGVPQKRERIYIVAFRKDLE 171
>gi|406885095|gb|EKD32374.1| hypothetical protein ACD_77C00108G0001, partial [uncultured
bacterium]
Length = 380
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 52/123 (42%), Gaps = 7/123 (5%)
Query: 12 PCQPYTRQGLQKQ-SSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKM 67
PCQP+++ G Q D + F + E+I K P +ENV + T+ +
Sbjct: 66 PCQPFSKAGEQLGFGCDKQGDLFQYVAEII--AAKRPAFFLLENVPNLLKHNNGKTYKLI 123
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS-FRCQLLNNQLLRSPSPLLG 126
+E L N Y E LSP FGVP R R + + + L F N L L G
Sbjct: 124 LEKLKNLQYDVDEHRLSPHHFGVPQIRDRVYIVGAKHGLRHFSWPEKKNHELNICDVLEG 183
Query: 127 NDD 129
N D
Sbjct: 184 NPD 186
>gi|206975132|ref|ZP_03236046.1| modification methylase HaeIII [Bacillus cereus H3081.97]
gi|206746553|gb|EDZ57946.1| modification methylase HaeIII [Bacillus cereus H3081.97]
Length = 352
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 118/291 (40%), Gaps = 65/291 (22%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFV-ENVVGFETSDT---HA 65
PPCQ ++++G +K +D R F F + ++ +KP M FV ENV T++
Sbjct: 76 GPPCQGFSQKGQRKTINDDRNFLFKYFVSVV-GLIKP--MYFVMENVPNLLTAEKGYFKK 132
Query: 66 KMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR--KPLSFRCQLLNNQLLRSPSP 123
++ ++ + Y +L+ FGVP +R R + KR P F P P
Sbjct: 133 EIYDLFKSLGYSLSSGVLNAADFGVPQNRKRAVIIGKRGLAPAEF------------PKP 180
Query: 124 LLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDF 183
++ + WD + + FLE S G++V + V
Sbjct: 181 ------------KNEKNTIWDAISDLA-----FLE-SGEGNEVQDYRKAAESFYQQV--- 219
Query: 184 GAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCC----FTKSYY-----R 234
+++ ++ V+ +H V L ER + ++ P++ R TKS Y R
Sbjct: 220 -MRKKSTQLYNHVATNHSKVAL---ER----LKLIPPNAGREVLPKEHLTKSIYSGTWTR 271
Query: 235 YVKGTGSLLATVQPKNKGKASSLKEQH---LRYFTPREVANLHSFPGDFQF 282
K S+ T + SS K H R T RE A + SFP DF+F
Sbjct: 272 MRKDEVSVTVTTRFDT---PSSGKFTHPFLNRAITVREAARIQSFPDDFRF 319
>gi|428312113|ref|YP_007123090.1| DNA-methyltransferase Dcm [Microcoleus sp. PCC 7113]
gi|428253725|gb|AFZ19684.1| DNA-methyltransferase Dcm [Microcoleus sp. PCC 7113]
Length = 425
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLF--VENVVGFETSDTHAKMIE 69
PCQP++ G ++ D R F I++++ H KP + V+ ++ E AK++
Sbjct: 109 PCQPFSSAGKKEGVRDPRGNLFEVIVDIL-HRHKPRFFILENVKRLLSMEEGTHFAKILS 167
Query: 70 ILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
LA+ DY + +++ + FG+P +R R L
Sbjct: 168 RLASLDYTIEWRLVNAMHFGLPQNRQRIVILG 199
>gi|397689937|ref|YP_006527191.1| DNA-cytosine methyltransferase [Melioribacter roseus P3M]
gi|395811429|gb|AFN74178.1| DNA-cytosine methyltransferase [Melioribacter roseus P3M]
Length = 322
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 5/100 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQP++ G +K D R F I ++ + K P +ENV VG + T ++
Sbjct: 77 PCQPFSIIGQKKGFEDTRGTLFFDIARIL--SAKRPKAFVLENVKMLVGHDKGRTLKTIL 134
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 108
+L Y +L+ L +G+P R R + K + F
Sbjct: 135 RVLRELGYYVDYKVLNALDYGLPQKRERVIIIGYYKFILF 174
>gi|422301674|ref|ZP_16389039.1| Modification methylase HpaII [Microcystis aeruginosa PCC 9806]
gi|389789264|emb|CCI14672.1| Modification methylase HpaII [Microcystis aeruginosa PCC 9806]
Length = 347
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 7/102 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQ ++ G + DAR F ++ ++ K P +ENV G D T ++
Sbjct: 71 PCQAFSIAGRKHGFEDARGTLFFEVARILHE--KKPKAFILENVQGLVHHDRGKTLKTIL 128
Query: 69 EILANS--DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 108
+ILA ++ IL+ FGVP +RPR F + R+ L+
Sbjct: 129 DILAKDLHYFVPSPQILNARYFGVPQNRPRIFIVGFREDLNI 170
>gi|153815491|ref|ZP_01968159.1| hypothetical protein RUMTOR_01726 [Ruminococcus torques ATCC 27756]
gi|145847133|gb|EDK24051.1| DNA (cytosine-5-)-methyltransferase [Ruminococcus torques ATCC
27756]
Length = 439
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQ ++ G ++ +DAR F +I L+ K P +ENV G + D T ++
Sbjct: 88 PCQAFSIAGKREGFADARGTLFFEIARLVAD--KRPAYFILENVPGLLSHDKGRTFHTIL 145
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
L+ Y + +L+ FGVP SR R + +
Sbjct: 146 STLSELGYGVEWKVLNSKDFGVPQSRKRVYLVG 178
>gi|256760956|ref|ZP_05501536.1| type II restriction-modification system methylation subunit
[Enterococcus faecalis T3]
gi|256682207|gb|EEU21902.1| type II restriction-modification system methylation subunit
[Enterococcus faecalis T3]
Length = 405
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 5/93 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQ +++ G + D R F + +I K P M +ENV +T D T+ +
Sbjct: 164 PCQAFSQAGKKLGFEDIRGTLFFDVARII--KAKRPKMFLLENVKNLKTHDKGRTYETIT 221
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
+ L + DY + FG P +R R + +
Sbjct: 222 KTLRDMDYEVDSILYKARDFGAPQNRERIYIVG 254
>gi|386820986|ref|ZP_10108202.1| DNA-methyltransferase Dcm [Joostella marina DSM 19592]
gi|386426092|gb|EIJ39922.1| DNA-methyltransferase Dcm [Joostella marina DSM 19592]
Length = 461
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQP+++ G Q D R F +I +++ + P +ENV + D T M
Sbjct: 77 PCQPFSKAGKQLGRDDDRGTLFDEIAKIL--AFRKPKFFILENVPFIKQHDNEETWNYMH 134
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
L+N Y + SP FGVP R R F +
Sbjct: 135 NELSNLGYEVDHQVYSPQDFGVPQHRKRIFIVG 167
>gi|376001427|ref|ZP_09779297.1| DNA (cytosine-5-)-methyltransferase [Arthrospira sp. PCC 8005]
gi|375330256|emb|CCE15050.1| DNA (cytosine-5-)-methyltransferase [Arthrospira sp. PCC 8005]
Length = 387
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 42/97 (43%), Gaps = 6/97 (6%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF---ETSDTHAK 66
PPCQ ++ G + D R F FL+ L + P + +ENV G + +T
Sbjct: 82 GPPCQGFSTIG-SNNNLDKRNFLFLEFLRFVEQL--QPDYIIIENVTGLLSRKNENTLTS 138
Query: 67 MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 103
++ L N Y +LS +GVP R R L R
Sbjct: 139 ILTCLQNIGYTVDVRVLSAHHYGVPEKRRRTIFLGNR 175
>gi|386752365|ref|YP_006225584.1| DNA-cytosine methyltransferase [Helicobacter pylori Shi169]
gi|386753903|ref|YP_006227121.1| DNA-cytosine methyltransferase [Helicobacter pylori Shi112]
gi|384558623|gb|AFH99090.1| DNA-cytosine methyltransferase [Helicobacter pylori Shi169]
gi|384560161|gb|AFI00628.1| DNA-cytosine methyltransferase [Helicobacter pylori Shi112]
Length = 309
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQ ++ GLQK +D R +++ +I K P +L +ENV V +T ++
Sbjct: 70 PCQAFSIAGLQKGLNDERGAIVMEMFRII--QAKKPQVLLLENVKNLVSHNKGETLKFIL 127
Query: 69 EILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 101
E L N Y IL+ ++ VP +R R + +
Sbjct: 128 ETLKNLGYFVHYKILNTYEYSTVPQNRERIYIIG 161
>gi|15088756|ref|NP_150145.1| putative DNA methylase [Streptococcus phage MM1]
gi|15074902|emb|CAC48079.1| putative DNA methylase [Streptococcus phage MM1]
gi|73747029|gb|AAZ82425.1| C5 methyltransferase alpha subunit [Streptococcus phage MM1 1998]
Length = 385
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 5/101 (4%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G ++ D R F +I ++ P LF+ENV G D IL
Sbjct: 75 PCQAFSIAGNRRGFEDTRGTLFFEIARFA--SILKPRYLFLENVKGLLNHDRGNTFEVIL 132
Query: 72 ANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRKPLSFR 109
+ D L + +L+ FGVP +R R F + + S R
Sbjct: 133 SALDELGYDVEWQVLNSKNFGVPQNRERVFIIGHLRGGSGR 173
>gi|317056067|ref|YP_004104534.1| DNA-cytosine methyltransferase [Ruminococcus albus 7]
gi|315448336|gb|ADU21900.1| DNA-cytosine methyltransferase [Ruminococcus albus 7]
Length = 425
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G ++ D R F +I + VK P L +ENV G + D IL
Sbjct: 74 PCQSFSIAGKRRGFDDVRGTLFFEIARI--AAVKRPRYLLMENVPGLLSHDQGRTFEIIL 131
Query: 72 ANSDYLTQEF---ILSPLQFGVPYSRPRYFCLA 101
D L + +L+ FGVP +R R F +
Sbjct: 132 QTLDELGYDVAWQVLNSADFGVPQARKRVFIIG 164
>gi|255073161|ref|XP_002500255.1| DNA methyltransferase [Micromonas sp. RCC299]
gi|226515517|gb|ACO61513.1| DNA methyltransferase [Micromonas sp. RCC299]
Length = 599
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++R+G ++ D R F +IL ++ V P +ENV G T D M EI+
Sbjct: 346 PCQSFSRRGDRRGLGDPRGQLFREILRVL--VVAEPRAFVLENVEGLVTMDDGETMAEIV 403
Query: 72 A---NSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 106
A + Y + + VP SR R F + R L
Sbjct: 404 AALESVGYAVGTRVFDARGW-VPQSRKRVFFVGFRSDL 440
>gi|423068110|ref|ZP_17056898.1| hypothetical protein HMPREF9682_00119 [Streptococcus intermedius
F0395]
gi|355367001|gb|EHG14714.1| hypothetical protein HMPREF9682_00119 [Streptococcus intermedius
F0395]
Length = 318
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Query: 12 PCQPYTRQGLQK---QSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMI 68
PCQ ++R GL+K + S R+ + + +I P ++ ENV G + A
Sbjct: 76 PCQDFSRSGLKKGGTKGSGTRSSLLFETIRIIEEMNIKPKVVLWENVKGVLDRNLRASFF 135
Query: 69 EILANSDYLTQEF---ILSPLQFGVPYSRPRYFCLA 101
L + L E IL+ + FG+P R R F ++
Sbjct: 136 HYLKEMERLGYESKYEILNAMDFGIPQKRERIFVVS 171
>gi|294673665|ref|YP_003574281.1| prophage PRU01 DNA methylase, C-5 cytosine-specific family
[Prevotella ruminicola 23]
gi|294471747|gb|ADE81136.1| prophage PRU01, DNA methylase, C-5 cytosine-specific family
[Prevotella ruminicola 23]
Length = 330
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 114/302 (37%), Gaps = 67/302 (22%)
Query: 10 SPPCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAK 66
PPCQ ++ G + DAR F +++IL+ + P ENV G +D H+
Sbjct: 70 GPPCQSWSEAGSLRGIEDARGQLFFDYIRILQEV-----KPKFFLAENVSGM-LADRHSG 123
Query: 67 MIEILAN----SDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPS 122
++ + N S Y +++ +GV R R F + R L+ +
Sbjct: 124 AVQNILNMFKESGYNVSLTLVNAKDYGVAQERKRVFYIGFRNDLNIDFKFPEGST----- 178
Query: 123 PLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSG-DQVNTETGFLSTGTAAVD 181
DD IT D WD L +S P LE ++ + +N F+ +
Sbjct: 179 ----RDDKKKITLRDI---IWD-LKDSAVPA---LEKNHHNPEAINNNEYFIGAYSTIY- 226
Query: 182 DFGAAEETVEVDRCVSIDH--FLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGT 239
+ +R + D F V S G + +P + + F + R+V+G
Sbjct: 227 --------MSRNRVKAWDEQGFTVQAS-----GRQCQL-HPQAPKMIKFDTNDCRFVEG- 271
Query: 240 GSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSL 299
KE R T REVA + FP F+F + + Y ++GN++
Sbjct: 272 ------------------KEHLYRRMTVREVARVQGFPDSFKFIYD-KVDNAYKMIGNAV 312
Query: 300 SI 301
+
Sbjct: 313 PV 314
>gi|330991509|ref|ZP_08315460.1| Modification methylase DdeI [Gluconacetobacter sp. SXCC-1]
gi|329761528|gb|EGG78021.1| Modification methylase DdeI [Gluconacetobacter sp. SXCC-1]
Length = 449
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFET-----SDTH 64
PPCQ ++ G ++ D R+ L+++ + P ++ +ENV GF++ T+
Sbjct: 118 GPPCQGFSTNG-RRDPDDPRSRMVEAYLDIV--ALVRPRLVLLENVRGFQSMPHAGGGTY 174
Query: 65 AKMI-EILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
A E L++ Y + +L +GVP RPRY C+A
Sbjct: 175 ATATRERLSSLGYDSWADVLIASSWGVPQRRPRYICIA 212
>gi|385248901|ref|YP_005777120.1| DNA-cytosine methyltransferase [Helicobacter pylori F57]
gi|317181696|dbj|BAJ59480.1| DNA-cytosine methyltransferase [Helicobacter pylori F57]
Length = 309
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQ ++ GLQK +D R +++ +I K P +L +ENV V +T ++
Sbjct: 70 PCQAFSIAGLQKGLNDERGAIIMEMFRII--QAKKPQVLLLENVKNLVSHNKGETLKFIL 127
Query: 69 EILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 101
E L N Y IL+ ++ +P +R R + +
Sbjct: 128 ETLKNLGYFVHYKILNTYEYSTIPQNRERIYIIG 161
>gi|265751237|ref|ZP_06087300.1| DNA-cytosine methyltransferase [Bacteroides sp. 3_1_33FAA]
gi|270294602|ref|ZP_06200804.1| DNA-cytosine methyltransferase [Bacteroides sp. D20]
gi|263238133|gb|EEZ23583.1| DNA-cytosine methyltransferase [Bacteroides sp. 3_1_33FAA]
gi|270276069|gb|EFA21929.1| DNA-cytosine methyltransferase [Bacteroides sp. D20]
Length = 335
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 111/297 (37%), Gaps = 58/297 (19%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF---ETSDTHAK 66
PPCQ ++ G K DAR F + + ++ K P ENV G SD +
Sbjct: 70 GPPCQSWSEAGSLKGIEDARGQLFYEYIRILRD--KQPLFFVAENVSGMLAKRHSDAVSG 127
Query: 67 MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLG 126
+++ + Y +L+ + VP R R F + RK L P+PL
Sbjct: 128 FMKLFDEAGYDVNLKMLNANDYDVPEDRDRVFYIGFRKDLDI-------HDFEYPTPL-- 178
Query: 127 NDDMTVITKHDQP--DDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFG 184
KH + WD L +S P + + + +V F+ +
Sbjct: 179 --------KHKPTLRESIWD-LQDSAIPALEKNKTNGNACKVPNNEYFIGAYSPIF---- 225
Query: 185 AAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLA 244
+ +R S D P ++ G + +P + + K+ ++V+G+
Sbjct: 226 -----MSRNRVRSWDE---PGFTVQASGRQCQL-HPQAPKMIKVEKNLQKFVEGS----- 271
Query: 245 TVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSI 301
E R T REVA + SFP +F+F + + Y ++GN++ +
Sbjct: 272 --------------EHLYRRMTVREVARVQSFPDEFKFVYE-DVNYAYKMIGNAVPV 313
>gi|334121160|ref|ZP_08495234.1| DNA-cytosine methyltransferase [Microcoleus vaginatus FGP-2]
gi|333455446|gb|EGK84095.1| DNA-cytosine methyltransferase [Microcoleus vaginatus FGP-2]
Length = 343
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQP++ G + D R F +I ++I +K P ++ +ENV + + +T +I
Sbjct: 69 PCQPFSICGKKLGFEDTRGTLFFEICKII--KIKQPKVIVLENVKHLIHHDKGNTLKVII 126
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR-KPLSF 108
L + Y +L+ FG+P R R F +A + +P +F
Sbjct: 127 ASLEDLGYRVNYQMLNAKDFGIPQHRERIFIIATQGQPFNF 167
>gi|399527289|ref|ZP_10767011.1| C-5 cytosine-specific DNA methylase [Actinomyces sp. ICM39]
gi|398362145|gb|EJN45852.1| C-5 cytosine-specific DNA methylase [Actinomyces sp. ICM39]
Length = 322
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 52/119 (43%), Gaps = 8/119 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF---ETSDTHAKMI 68
PC P++ G Q + D R F ++EL+ V P + +ENV G + + +
Sbjct: 76 PCPPFSYAGKQLGADDERDL-FPAMIELV--RVVRPRAIMIENVRGLLDPKFQEYRKGVE 132
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGN 127
E LA Y Q +L FGVP RPR + R +S Q L P+P +G
Sbjct: 133 EHLAEIGYSLQWKLLQASDFGVPQLRPRVIAVGFRDDVSVSFNYPTPQQL--PAPTVGE 189
>gi|406973896|gb|EKD97156.1| Cytosine-specific methyltransferase [uncultured bacterium]
Length = 351
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG---FETSDTHAKMI 68
PCQ ++ GL+ S D R+ FL + + + +K P + ENV G + + K I
Sbjct: 76 PCQSFSMGGLRNPSKDDRSNLFLGFADAV-NKIK-PKVFIAENVSGLAKLQNGEWFKKQI 133
Query: 69 EILAN---SDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 107
++ N + Y Q +L+ +GVP +R R + R L
Sbjct: 134 DVYENQLAAKYRVQSLLLNAADYGVPQNRKRVIIVGVRDDLG 175
>gi|119355930|ref|YP_910574.1| DNA-cytosine methyltransferase [Chlorobium phaeobacteroides DSM
266]
gi|119353279|gb|ABL64150.1| DNA-cytosine methyltransferase [Chlorobium phaeobacteroides DSM
266]
Length = 371
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 113/303 (37%), Gaps = 49/303 (16%)
Query: 12 PCQPYTRQGLQKQ---SSDARAFSFLKILELIPHTVKPPHMLFVENVVGF-----ETSDT 63
PCQP+T+Q + +SD R + +++ + P ++FVENV G E
Sbjct: 89 PCQPFTKQKTNTKKDAASDDRRGLLIYFSDIVHACL--PELVFVENVPGLQKFSLEDGGP 146
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSP 123
A I L +DY +++ +G P R R+ +A R L L P+P
Sbjct: 147 LAMFISRLKQNDYFVDFDVIAAQDYGSPQVRRRFVLIASR---------LGKITL--PAP 195
Query: 124 LLG-NDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLST-GTAAVD 181
G N + +T HD + + V+ E ++ + N LS +
Sbjct: 196 THGPNTKNSYVTVHD--------AIGNLPSVKHGTEHPDNQNYPNHRAAMLSALNLERIR 247
Query: 182 DFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGS 241
GA +R L+P ++ D KR + Y R G +
Sbjct: 248 HTGANGRRDWPER-------LLPKCYAQK---------KDGKRYEGHSDCYTRLAWGEPA 291
Query: 242 LLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSI 301
T + + + R T RE A L FP DF F L+ R +GN++ +
Sbjct: 292 PGLTTRCISYSNGRFGHPEQDRAITIREAAKLQGFPDDFIFTGSLNSMARQ--IGNAVPV 349
Query: 302 AVV 304
+V
Sbjct: 350 SVA 352
>gi|420487387|ref|ZP_14985991.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-8]
gi|420521170|ref|ZP_15019601.1| modification methylase BanI [Helicobacter pylori Hp P-8b]
gi|393101964|gb|EJC02530.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-8]
gi|393127757|gb|EJC28202.1| modification methylase BanI [Helicobacter pylori Hp P-8b]
Length = 423
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQP++ G ++ D R F +I+ + K P +ENV G T D T + M+
Sbjct: 92 PCQPFSSAGKRRGLDDTRGTLFFEIMRFL--LAKKPKGFLLENVPGLLTHDKGKTFSIML 149
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
L Y +L+ FGV +R R + +
Sbjct: 150 GHLKECGYFVNYKLLNAKDFGVAQNRERLYIVG 182
>gi|260642764|ref|ZP_05417219.2| modification methylase NgoMIV [Bacteroides finegoldii DSM 17565]
gi|260620609|gb|EEX43480.1| DNA (cytosine-5-)-methyltransferase [Bacteroides finegoldii DSM
17565]
Length = 327
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHA---KMI 68
PC P++ G Q + D R F ++L L+ P ++ +ENV G +S +A +++
Sbjct: 73 PCPPFSVAGKQLGADDERDL-FPQMLRLVQEI--NPRIVMIENVRGILSSKFNAYREQVL 129
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 107
+ L Y T +L+ +GVP RPR + R+ L+
Sbjct: 130 QTLKKLGYSTHLQLLNASDYGVPQLRPRVIIIGIRRDLA 168
>gi|91213886|ref|YP_543872.1| hypothetical protein UTI89_C4938 [Escherichia coli UTI89]
gi|110644679|ref|YP_672409.1| modification methylase [Escherichia coli 536]
gi|191170832|ref|ZP_03032384.1| modification methylase HgiDII [Escherichia coli F11]
gi|300974517|ref|ZP_07172633.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 200-1]
gi|386606922|ref|YP_006113222.1| DNA-cytosine methyltransferase [Escherichia coli UM146]
gi|422366411|ref|ZP_16446879.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 153-1]
gi|422377725|ref|ZP_16457960.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 60-1]
gi|432443967|ref|ZP_19686287.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE189]
gi|432444295|ref|ZP_19686608.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE191]
gi|432454611|ref|ZP_19696824.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE201]
gi|432469689|ref|ZP_19711743.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE206]
gi|432516593|ref|ZP_19753803.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE224]
gi|432571672|ref|ZP_19808168.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE55]
gi|432653865|ref|ZP_19889596.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE87]
gi|432701721|ref|ZP_19936859.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE169]
gi|432716220|ref|ZP_19951239.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE8]
gi|432748179|ref|ZP_19982835.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE43]
gi|432988209|ref|ZP_20176908.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE215]
gi|432993425|ref|ZP_20182049.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE218]
gi|433012735|ref|ZP_20201117.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE104]
gi|433022308|ref|ZP_20210333.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE106]
gi|433061115|ref|ZP_20248102.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE124]
gi|433076824|ref|ZP_20263389.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE131]
gi|433100073|ref|ZP_20286184.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE145]
gi|433118431|ref|ZP_20304182.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE153]
gi|433142922|ref|ZP_20328102.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE168]
gi|433197111|ref|ZP_20381039.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE94]
gi|433327076|ref|ZP_20403659.1| DNA-cytosine methyltransferase [Escherichia coli J96]
gi|91075460|gb|ABE10341.1| hypothetical protein UTI89_C4938 [Escherichia coli UTI89]
gi|110346271|gb|ABG72508.1| modification methylase [Escherichia coli 536]
gi|190909056|gb|EDV68643.1| modification methylase HgiDII [Escherichia coli F11]
gi|300308872|gb|EFJ63392.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 200-1]
gi|307629406|gb|ADN73710.1| DNA-cytosine methyltransferase [Escherichia coli UM146]
gi|315290903|gb|EFU50272.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 153-1]
gi|324010993|gb|EGB80212.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 60-1]
gi|430960119|gb|ELC78286.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE189]
gi|430977377|gb|ELC94218.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE191]
gi|430986963|gb|ELD03525.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE201]
gi|431000237|gb|ELD16305.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE206]
gi|431036777|gb|ELD47766.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE224]
gi|431113151|gb|ELE16832.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE55]
gi|431186073|gb|ELE85648.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE87]
gi|431238754|gb|ELF33409.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE169]
gi|431249948|gb|ELF44102.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE8]
gi|431288452|gb|ELF79215.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE43]
gi|431491428|gb|ELH71034.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE215]
gi|431512402|gb|ELH90526.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE218]
gi|431535562|gb|ELI11902.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE104]
gi|431540917|gb|ELI16370.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE106]
gi|431562253|gb|ELI35566.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE124]
gi|431600852|gb|ELI70517.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE131]
gi|431622501|gb|ELI91191.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE145]
gi|431626909|gb|ELI95324.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE153]
gi|431666881|gb|ELJ33505.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE168]
gi|431725573|gb|ELJ89421.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE94]
gi|432345091|gb|ELL39614.1| DNA-cytosine methyltransferase [Escherichia coli J96]
Length = 348
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 7/97 (7%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHA-----K 66
PCQP+++Q K S D+R + I + P + +ENV G + D +
Sbjct: 79 PCQPFSQQNKNKTSDDSRRNLLNETHRFIRELL--PEYIMLENVPGMQKIDEEKEGPFQE 136
Query: 67 MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 103
I++L +Y FI + +G+P R R LA R
Sbjct: 137 FIKLLKELEYNYISFIANAENYGIPQRRKRLVLLASR 173
>gi|66391578|ref|YP_239103.1| hypothetical protein RB43ORF127c [Enterobacteria phage RB43]
gi|62288666|gb|AAX78649.1| hypothetical protein RB43ORF127c [Enterobacteria phage RB43]
gi|406718867|emb|CCL97592.1| protein of unknown function [Enterobacteria phage RB43]
gi|415434135|emb|CCK73975.1| protein of unknown function [Enterobacteria phage RB43]
Length = 302
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 6/100 (6%)
Query: 5 HAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD- 62
H LL+ PCQ +++ GL+ D R F +IL +I K P +LF ENV T D
Sbjct: 64 HDILLAGFPCQAFSKAGLKLGFDDVRGTVFFEILRII--RAKKPRVLFFENVPELLTHDK 121
Query: 63 --THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCL 100
T + +L Y L+ FG+P R R F +
Sbjct: 122 GKTFKTIYGLLEAEGYNVFYQRLNTKDFGLPQRRERVFIV 161
>gi|257867246|ref|ZP_05646899.1| DNA methyltransferase [Enterococcus casseliflavus EC30]
gi|257873580|ref|ZP_05653233.1| DNA methyltransferase [Enterococcus casseliflavus EC10]
gi|257801302|gb|EEV30232.1| DNA methyltransferase [Enterococcus casseliflavus EC30]
gi|257807744|gb|EEV36566.1| DNA methyltransferase [Enterococcus casseliflavus EC10]
gi|347952138|gb|AEP33195.1| hypothetical protein [Enterococcus faecalis]
Length = 470
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 42/98 (42%), Gaps = 5/98 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQ ++ GL++ +D R F +L+ P M ENV G D T MI
Sbjct: 214 PCQSFSYAGLRQGLNDTRGTLFHPYSQLLVQL--QPKMFIAENVKGLLNHDNGRTLETMI 271
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 106
EI +S Y IL+ +GV R R + R L
Sbjct: 272 EIFEDSGYQVFWNILNAWNYGVAQKRERIVIIGIRNDL 309
>gi|221232312|ref|YP_002511465.1| DNA methylase [Streptococcus pneumoniae ATCC 700669]
gi|415699914|ref|ZP_11457743.1| modification methylase Rho11sI [Streptococcus pneumoniae 459-5]
gi|220674773|emb|CAR69346.1| putative DNA methylase [Streptococcus pneumoniae ATCC 700669]
gi|381315526|gb|EIC56288.1| modification methylase Rho11sI [Streptococcus pneumoniae 459-5]
Length = 369
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 5/101 (4%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G ++ D R F +I ++ P LF+ENV G D IL
Sbjct: 59 PCQAFSIAGNRRGFEDTRGTLFFEIARFA--SILKPRYLFLENVKGLLNHDRGNTFEVIL 116
Query: 72 ANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRKPLSFR 109
+ D L + +L+ FGVP +R R F + + S R
Sbjct: 117 SALDELGYDVEWQVLNSKNFGVPQNRERVFIIGHLRGGSGR 157
>gi|392396710|ref|YP_006433311.1| DNA-methyltransferase Dcm [Flexibacter litoralis DSM 6794]
gi|390527788|gb|AFM03518.1| DNA-methyltransferase Dcm [Flexibacter litoralis DSM 6794]
Length = 343
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 10 SPPCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAK 66
PPCQ ++ G + D R + F++ILE K P ENV G S H +
Sbjct: 69 GPPCQSWSEAGKARGIKDKRGQLFYDFIRILE-----EKQPKFFLAENVSGMLIS-KHNQ 122
Query: 67 MIEIL------ANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQL 117
+E + A Y +L+ + VP R R F + RK L+F+ + N +
Sbjct: 123 ALEGIKELFRNAGLGYELSFKMLNASDYNVPQDRKRVFFIGIRKDLNFKYEFPNEKF 179
>gi|315611977|ref|ZP_07886895.1| C-5 cytosine-specific DNA methylase [Streptococcus sanguinis ATCC
49296]
gi|315315966|gb|EFU64000.1| C-5 cytosine-specific DNA methylase [Streptococcus sanguinis ATCC
49296]
Length = 359
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 5/93 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G ++ D R F +I ++ P L +ENV G D A IL
Sbjct: 75 PCQAFSIAGARRGFEDTRGTLFFEIARFA--SILRPKYLLLENVKGLLNHDGGATFETIL 132
Query: 72 ANSD---YLTQEFILSPLQFGVPYSRPRYFCLA 101
D Y + IL+ FGVP +R R F +
Sbjct: 133 GALDELGYNVEWQILNSKDFGVPQNRERVFIVG 165
>gi|414086205|ref|YP_006986395.1| putative DNA-methyltransferase, type II restriction-modification
system [Cronobacter phage vB_CsaM_GAP161]
gi|378566530|gb|AFC22226.1| putative DNA-methyltransferase, type II restriction-modification
system [Cronobacter phage vB_CsaM_GAP161]
Length = 303
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 6/100 (6%)
Query: 5 HAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD- 62
H LL+ PCQ +++ GL+ D R F +IL +I K P +LF ENV T D
Sbjct: 64 HDILLAGFPCQAFSKAGLKLGFDDVRGTVFFEILRII--RAKKPRVLFFENVPELLTHDK 121
Query: 63 --THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCL 100
T + +L Y L+ FG+P R R F +
Sbjct: 122 GKTFKTIYGLLEAEGYNVFYQRLNTKDFGLPQRRERVFIV 161
>gi|307152624|ref|YP_003888008.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822]
gi|306982852|gb|ADN14733.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822]
Length = 708
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG--FETSDTHA 65
+ PPCQP+++ G Q D+R F L+ + P + ENV G +
Sbjct: 95 IAGPPCQPFSKGGYQLGLLDSRD-GFPIFLDAVERY--HPKIALFENVQGMLYRNKRYFE 151
Query: 66 KMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
+++ L+ + Y + IL+ +GVP R R FC+A
Sbjct: 152 EIVATLSTNGYFVEWKILNASDYGVPQRRQRLFCVA 187
>gi|433615137|ref|YP_007191934.1| Site-specific DNA methylase [Sinorhizobium meliloti GR4]
gi|429553336|gb|AGA08335.1| Site-specific DNA methylase [Sinorhizobium meliloti GR4]
Length = 504
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 15/111 (13%)
Query: 10 SPPCQPYTRQGLQKQSS----------DARAFSFLKILELIPHTVKPPHMLFVENVVGFE 59
PPCQ + R G K D RA +++ L + P + +ENV
Sbjct: 102 GPPCQAFARVGRSKLREIAEHPEAFRHDPRARLYIEYLAYVEACA--PLAVVIENVPDML 159
Query: 60 TSDTH---AKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 107
H A++ EILA+ DY+ + +L+ +GVP R R +A RK L+
Sbjct: 160 NHGGHNLAAEIGEILASKDYVVRYTLLNAAFYGVPQMRERMILIAIRKELA 210
>gi|75812889|ref|YP_320506.1| C-5 cytosine-specific DNA methylase [Anabaena variabilis ATCC
29413]
gi|75705645|gb|ABA25317.1| C-5 cytosine-specific DNA methylase [Anabaena variabilis ATCC
29413]
Length = 415
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 114/325 (35%), Gaps = 82/325 (25%)
Query: 5 HAWLLSPPCQPYTRQGLQKQSSDARAF--SFLK-ILELIPHTVKPPHMLFVENVVGFETS 61
H PPCQ ++ GLQ + + F++ +LEL P +ENV G E
Sbjct: 84 HTVFGGPPCQGFSVAGLQNVEDERNSLVGEFVRLVLELNPLAA------IMENVPGIENQ 137
Query: 62 D--THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLR 119
++ + Y ++ L+ +GVP +R R F +A + + +R
Sbjct: 138 KFGCITANLQAVLEEHYFLSKWNLTASDYGVPQARKRVFFVASKFGEIIPPEHQPQHTVR 197
Query: 120 S------PSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLE--FSNSGDQVNTETG 171
P PLL + T+ PD W K ++LE F N G N ETG
Sbjct: 198 DAIADLLPVPLLPKQN----TQEWHPD--WVK-----GEYAKYLEKIFPNFGIVTNIETG 246
Query: 172 FLSTGTAA------VDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRC 225
F +T ++ A E + + D F V L R GS
Sbjct: 247 FAATTHTPEVIQQFINTPPGAREAKSKSKKLQWDGFCVTL----RAGSG----------- 291
Query: 226 CCFTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHH 285
N+ L + R + RE A LHS+P F F
Sbjct: 292 ------------------------NRTALRPLHPEQPRVISVREAARLHSYPDWFNFSEA 327
Query: 286 LSLRQRYALLGNSLSIAVVAPLLQY 310
+ QR +GNS V PLL Y
Sbjct: 328 ILHAQRE--IGNS-----VPPLLAY 345
>gi|82752078|ref|YP_417819.1| DNA modification methylase [Staphylococcus aureus RF122]
gi|82657609|emb|CAI82057.1| DNA modification methylase [Staphylococcus aureus RF122]
Length = 402
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 12/104 (11%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQ ++ G QK D R F ++L I K P +F+ENV T D T +
Sbjct: 84 PCQAFSIAGYQKGFEDERGDLFFELLRFINE--KSPQAIFIENVKNMVTHDHGNTFKVIK 141
Query: 69 EILANSDYLTQEFILSPLQFG-VPYSRPRYFCLAKRKPLSFRCQ 111
E L + Y + +L+ +G +P +R R + + F+C+
Sbjct: 142 EALTLNGYFIKWKVLNAKDYGDIPQNRERIYIVG------FKCR 179
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query: 234 RYVKGTGSLLATVQPKNKGKASS----LKEQH-LRYFTPREVANLHSFPGDFQFPHHLSL 288
RYV+ S + N G +K + +R TPRE ++ FP F+ P ++S
Sbjct: 240 RYVRANKSGVVPTLTANMGTGGHNVPLIKSKFGIRKLTPRETFSVQGFPESFKLPDNMSN 299
Query: 289 RQRYALLGNSLSIAVVAPLLQ 309
Q Y GNS+ + VV + +
Sbjct: 300 GQLYKQAGNSVVVPVVKRIAE 320
>gi|355575377|ref|ZP_09044915.1| hypothetical protein HMPREF1008_00892 [Olsenella sp. oral taxon 809
str. F0356]
gi|354817687|gb|EHF02186.1| hypothetical protein HMPREF1008_00892 [Olsenella sp. oral taxon 809
str. F0356]
Length = 295
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIE 69
PPCQ Y+ G K+ RA +K EL+ +KP ++F ENV E T KM +
Sbjct: 71 GPPCQDYSIAG--KRQIGERANLTVKYAELVID-IKPTWVVF-ENVYNIERFPTLPKMEQ 126
Query: 70 ILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK 102
L ++ Y +L + GVP R R+F + K
Sbjct: 127 KLRDAGYGITTHVLDASRCGVPQKRRRFFLIGK 159
>gi|323650438|gb|ADX97294.1| M.Cac8I [Clostridium acetobutylicum]
Length = 398
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 118/313 (37%), Gaps = 60/313 (19%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ + + D + + +L++L++I VK P +ENV G E + + IL
Sbjct: 106 PCQGFSIANVNRSMEDEKNYLYLELLKVI--HVKNPKFFVLENVKGLENMEKGEVLNVIL 163
Query: 72 ANSD------YLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLL 125
+ + Y +L+ FGVP +R R + R L R + P +
Sbjct: 164 DDLEKAGKCGYTVCYDVLNAYNFGVPQNRERVIIVGIRNDLRDR-------YIIPQKPAV 216
Query: 126 GNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSN---SGD---------QVNTETGFL 173
N T+ K S KL E P ++ N +G N ET L
Sbjct: 217 KNKRKTLFVKPTHSKTS--KLGEELKPWQKINYLYNLWTNGKLDSNKNYLVNENDETYKL 274
Query: 174 STGTAAVDDFGAAEETVEVDRCVSIDHF--LVPLSLIERWGSAMDIVYPDSKRCCCFTK- 230
+T A+ D E D ++H L +S+ R G+ R + K
Sbjct: 275 ATLRDAISDLPLE---FEADNKDILNHTGSLCKVSISNRVGN----------RATSWDKY 321
Query: 231 --SYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSL 288
+ GTG L P QH R + REVA + +FP F F + S
Sbjct: 322 APTIMGRGSGTGGPLIIPHPL----------QH-RRLSVREVARIQTFPDKFLFKGNNS- 369
Query: 289 RQRYALLGNSLSI 301
Y +GN++ +
Sbjct: 370 -ACYRQIGNAVPV 381
>gi|34451619|gb|AAQ72366.1| TspRI methylase [Thermus sp. R]
Length = 431
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 5/101 (4%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEI- 70
PCQ ++ ++ D R + F + + L P +L VENV G ++ ++EI
Sbjct: 143 PCQRFSLTNRKRNDEDPRNYLFREFIRLA--RFLDPDVLIVENVSGIRSAANGKFVLEIV 200
Query: 71 --LANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 109
+ + Y +L+ FGVP R R F + R + FR
Sbjct: 201 RAMEEAGYRAHVEVLNAADFGVPQHRKRIFFVGVRPGIEFR 241
>gi|420463346|ref|ZP_14962124.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-4]
gi|393080874|gb|EJB81599.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-4]
Length = 309
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQ ++ GLQK +D R +++ +I K P +L +ENV V +T ++
Sbjct: 70 PCQAFSIAGLQKGLNDERGAIVMEMFRII--QAKKPQVLLLENVKNLVSHNKGETLKFIL 127
Query: 69 EILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 101
E L N Y IL+ ++ +P +R R + +
Sbjct: 128 ETLKNLGYFVHYKILNTYEYSTIPQNRERVYIIG 161
>gi|420441721|ref|ZP_14940666.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-36]
gi|393059850|gb|EJB60725.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-36]
Length = 309
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQ ++ GLQK +D R +++ +I K P +L +ENV V +T ++
Sbjct: 70 PCQAFSIAGLQKGLNDERGAIVMEMFRII--QAKKPQVLLLENVKNLVSHNKGETLKFIL 127
Query: 69 EILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 101
E L N Y IL+ ++ +P +R R + +
Sbjct: 128 ETLKNLGYFVHYKILNTYEYSTIPQNRERIYIIG 161
>gi|312902257|ref|ZP_07761465.1| helix-turn-helix protein [Enterococcus faecalis TX0635]
gi|283466064|emb|CBG92839.1| hypothetical protein [Enterococcus casseliflavus]
gi|310634316|gb|EFQ17599.1| helix-turn-helix protein [Enterococcus faecalis TX0635]
Length = 470
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 42/98 (42%), Gaps = 5/98 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQ ++ GL++ +D R F +L+ P M ENV G D T MI
Sbjct: 214 PCQSFSYAGLRQGLNDTRGTLFHPYSQLLVQL--QPKMFIAENVKGLLNHDNGRTLETMI 271
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 106
EI +S Y IL+ +GV R R + R L
Sbjct: 272 EIFEDSGYQVFWNILNAWNYGVAQKRERIVIIGIRNDL 309
>gi|417795101|ref|ZP_12442330.1| modification methylase HpaII [Streptococcus oralis SK255]
gi|334265943|gb|EGL84433.1| modification methylase HpaII [Streptococcus oralis SK255]
Length = 452
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 52/127 (40%), Gaps = 17/127 (13%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G + D R F +I P LF+ENV G D IL
Sbjct: 76 PCQAFSIAGRRLGFEDTRGTLFFEIARAAKQI--QPRFLFLENVKGLLNHDKGRTFTTIL 133
Query: 72 ANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRKPLSFRC--------QLLNNQLLRS 120
D L + +L+ FGVP +R R F + + S R Q N+++L++
Sbjct: 134 TTLDELGFDVEWQVLNSKDFGVPQNRERVFIIGHSRKKSTRLLFPFRREGQATNSEILKT 193
Query: 121 PSPLLGN 127
LGN
Sbjct: 194 ----LGN 196
>gi|331085742|ref|ZP_08334825.1| hypothetical protein HMPREF0987_01128 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330406665|gb|EGG86170.1| hypothetical protein HMPREF0987_01128 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 425
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 53/121 (43%), Gaps = 19/121 (15%)
Query: 4 AHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIP--HTVKPPHMLFVENV------ 55
A W PCQ + G Q+ R+ + I++L+ P LFVENV
Sbjct: 67 ADIWCFGFPCQDISVAGKQRGLVGKRSGIYFNIIDLLKGKEESDKPTYLFVENVKNLLSI 126
Query: 56 -VGFETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA------KRKPLSF 108
GF+ A ++ + + Y + +L+ +GVP +R R F +A +R+ LS
Sbjct: 127 NAGFD----FATVLSEMGEAGYDCRWQVLNSKDYGVPQNRERVFIIANLRSRGRREILSL 182
Query: 109 R 109
R
Sbjct: 183 R 183
>gi|373947858|ref|ZP_09607819.1| DNA-cytosine methyltransferase [Shewanella baltica OS183]
gi|386326294|ref|YP_006022411.1| DNA-cytosine methyltransferase [Shewanella baltica BA175]
gi|333820439|gb|AEG13105.1| DNA-cytosine methyltransferase [Shewanella baltica BA175]
gi|373884458|gb|EHQ13350.1| DNA-cytosine methyltransferase [Shewanella baltica OS183]
Length = 371
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 28/139 (20%), Positives = 62/139 (44%), Gaps = 10/139 (7%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF--ETSDTHA 65
L PPCQ ++R +S D R +LK++ + + P ++ +ENV+ ++ +
Sbjct: 115 LAGPPCQGHSRLNNHTRSKDPRNKLYLKVIRFVE--LCRPKLVIIENVLNIKNDSENILV 172
Query: 66 KMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLL 125
K + L Y + ++ ++G+ +R R+ +A + + + S +L
Sbjct: 173 KSADFLTGLGYSVENLVIKTAEYGIAQNRVRHIQVASIEKIDLSLESY------KSSSVL 226
Query: 126 GNDDMTVITKHDQPDDSWD 144
+ +I + DD++D
Sbjct: 227 SDVIADIIDNSNNSDDTFD 245
>gi|291551321|emb|CBL27583.1| DNA-methyltransferase (dcm) [Ruminococcus torques L2-14]
Length = 595
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 5/100 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQ ++ G Q+ D R F + LI P + ENV T D T KM
Sbjct: 296 PCQSFSLVGKQRGLDDTRGTLFYEYARLIDEI--KPKIFIYENVKAVTTHDGGKTWEKMQ 353
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 108
++ + Y IL+ +G+P +R R F + R+ L
Sbjct: 354 QVFSELGYKFTWSILNSKNYGIPQNRERLFVVGFREDLEL 393
>gi|1127162|pdb|1DCT|A Chain A, Dna (Cytosine-5) Methylase From Haeiii Covalently Bound To
Dna
gi|1127163|pdb|1DCT|B Chain B, Dna (Cytosine-5) Methylase From Haeiii Covalently Bound To
Dna
Length = 324
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 109/299 (36%), Gaps = 63/299 (21%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAK--- 66
PPCQ ++ G + D R F + + ++ K P ENV G + H K
Sbjct: 68 GPPCQSWSEGGSLRGIDDPRGKLFYEYIRILKQ--KKPIFFLAENVKGM-MAQRHNKAVQ 124
Query: 67 -MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLL 125
I+ N+ Y +L+ +GV R R F + FR +L N L P P L
Sbjct: 125 EFIQEFDNAGYDVHIILLNANDYGVAQDRKRVFYIG------FRKELNINYL--PPIPHL 176
Query: 126 GNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQV---NTETGFLSTGTAAVDD 182
K D WD +P+ + +G++ N E
Sbjct: 177 --------IKPTFKDVIWDL---KDNPIPALDKNKTNGNKCIYPNHEY------------ 213
Query: 183 FGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSL 242
F + T+ + R + + +W V ++C ++ +
Sbjct: 214 FIGSYSTIFMSR-----------NRVRQWNEPAFTVQASGRQCQLHPQA---------PV 253
Query: 243 LATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSI 301
+ V KN K KE R T RE A + FP DF F H+ SL Y ++GN++ +
Sbjct: 254 MLKVS-KNLNKFVEGKEHLYRRLTVRECARVQGFPDDFIF-HYESLNDGYKMIGNAVPV 310
>gi|420433643|ref|ZP_14932651.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-24]
gi|420507397|ref|ZP_15005910.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp H-24b]
gi|420509085|ref|ZP_15007587.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp H-24c]
gi|420532834|ref|ZP_15031197.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M1]
gi|420534397|ref|ZP_15032748.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M2]
gi|420536203|ref|ZP_15034545.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M3]
gi|420537907|ref|ZP_15036237.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M4]
gi|420541394|ref|ZP_15039702.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M6]
gi|420542914|ref|ZP_15041209.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M9]
gi|393051171|gb|EJB52124.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-24]
gi|393119478|gb|EJC19969.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp H-24b]
gi|393120511|gb|EJC21000.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp H-24c]
gi|393140465|gb|EJC40838.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M1]
gi|393142620|gb|EJC42974.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M2]
gi|393143851|gb|EJC44195.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M3]
gi|393145462|gb|EJC45793.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M4]
gi|393148014|gb|EJC48338.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M6]
gi|393159977|gb|EJC60226.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M9]
Length = 351
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 9/101 (8%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L++L+L+ P + ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFIFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
++ Y+ + IL+ L +G P R R + K
Sbjct: 126 FQRICNAFKERGYILEHAILNALDYGAPQVRERVILVGTLK 166
>gi|425472619|ref|ZP_18851460.1| Modification methylase HpaII [Microcystis aeruginosa PCC 9701]
gi|389881279|emb|CCI38157.1| Modification methylase HpaII [Microcystis aeruginosa PCC 9701]
Length = 347
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G + DAR F ++ ++ K P +ENV G D + IL
Sbjct: 71 PCQAFSIAGRKHGFEDARGTLFFEVARILHE--KKPKAFILENVQGLVHHDRGKTLKTIL 128
Query: 72 ANSDYLTQEF--------ILSPLQFGVPYSRPRYFCLAKRKPLSF 108
D L ++ IL+ FGVP +RPR F + R+ L+
Sbjct: 129 ---DILEKDLHYFVPSPQILNARYFGVPQNRPRIFIIGFREDLNI 170
>gi|319779706|ref|YP_004130619.1| DNA-cytosine methyltransferase [Taylorella equigenitalis MCE9]
gi|397661933|ref|YP_006502633.1| cytosine-specific methyltransferase [Taylorella equigenitalis ATCC
35865]
gi|317109730|gb|ADU92476.1| DNA-cytosine methyltransferase [Taylorella equigenitalis MCE9]
gi|394350112|gb|AFN36026.1| cytosine-specific methyltransferase [Taylorella equigenitalis ATCC
35865]
gi|399115775|emb|CCG18578.1| cytosine-specific methyltransferase [Taylorella equigenitalis
14/56]
Length = 329
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 14/116 (12%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G + D+R F ++ + K P ++F+ENV F D + I I+
Sbjct: 80 PCQAFSISGKRLGFEDSRGTLFFDVVRIAKS--KRPKVIFLENVKNFAKHDG-GRTIRIV 136
Query: 72 ANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSP 123
S Y +L+ +G+P SR R F +A R+ L +Q + P+P
Sbjct: 137 KESLLRLGYSFDWKVLNSCDYGIPQSRARIFMVAFREDLK-------HQEFKFPAP 185
>gi|421709752|ref|ZP_16149111.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R018c]
gi|421723005|ref|ZP_16162262.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R056a]
gi|407211197|gb|EKE81066.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R018c]
gi|407225373|gb|EKE95144.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R056a]
Length = 309
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQ ++ GLQK +D R +++ +I K P +L +ENV V +T ++
Sbjct: 70 PCQAFSIAGLQKGLNDERGAIVMEMFRII--QAKKPQVLLLENVKNLVSHNKGETLKFIL 127
Query: 69 EILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 101
E L N Y IL+ ++ +P +R R + +
Sbjct: 128 ETLKNLGYFVHYKILNTYEYSTIPQNRERVYIIG 161
>gi|443245117|ref|YP_007378342.1| cytosine-specific DNA methylase [Nonlabens dokdonensis DSW-6]
gi|442802516|gb|AGC78321.1| cytosine-specific DNA methylase [Nonlabens dokdonensis DSW-6]
Length = 451
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEI 70
PCQP+++ G Q +D + + F KI+E++ + P +ENV ++ D A I
Sbjct: 69 PCQPFSKAGDQFGLNDKKNGNLFDKIVEILDY--HKPEYFILENVRNLKSHDNFATWKYI 126
Query: 71 LANSD----YLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 107
+ Y + I+SP +G+P R R F + R L+
Sbjct: 127 KNKLEKSLGYTIDDKIMSPHNYGIPQHRERIFIIGSRTGLN 167
>gi|420461645|ref|ZP_14960435.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-3]
gi|393081625|gb|EJB82345.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-3]
Length = 309
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQ ++ GLQK +D R +++ +I K P +L +ENV V +T ++
Sbjct: 70 PCQAFSIAGLQKGLNDERGAIVMEMFRII--QAKKPQVLLLENVKNLVSHNKGETLKFIL 127
Query: 69 EILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 101
E L N Y IL+ ++ +P +R R + +
Sbjct: 128 ETLKNLGYFVHYKILNTYEYSTIPQNRERVYIIG 161
>gi|421720038|ref|ZP_16159322.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R046Wa]
gi|407221361|gb|EKE91166.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R046Wa]
Length = 309
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQ ++ GLQK +D R +++ +I K P +L +ENV V +T ++
Sbjct: 70 PCQAFSIAGLQKGLNDERGAIVMEMFRII--QAKKPQVLLLENVKNLVSHNKGETLKFIL 127
Query: 69 EILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 101
E L N Y IL+ ++ +P +R R + +
Sbjct: 128 ETLKNLGYFVHYKILNTYEYSTIPQNRERVYIIG 161
>gi|421716410|ref|ZP_16155721.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R037c]
gi|407220673|gb|EKE90479.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R037c]
Length = 309
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQ ++ GLQK +D R +++ +I K P +L +ENV V +T ++
Sbjct: 70 PCQAFSIAGLQKGLNDERGAIVMEMFRII--QAKKPQVLLLENVKNLVSHNKGETLKFIL 127
Query: 69 EILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 101
E L N Y IL+ ++ +P +R R + +
Sbjct: 128 ETLKNLGYFVHYKILNTYEYSTIPQNRERIYIIG 161
>gi|420449869|ref|ZP_14948735.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-45]
gi|393069186|gb|EJB69984.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-45]
Length = 309
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQ ++ GLQK +D R +++ +I K P +L +ENV V +T ++
Sbjct: 70 PCQAFSIAGLQKGLNDERGAIVMEMFRII--QAKKPQVLLLENVKNLVSHNKGETLKFIL 127
Query: 69 EILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 101
E L N Y IL+ ++ +P +R R + +
Sbjct: 128 ETLKNLGYFVHYKILNTYEYSTIPQNRERVYIIG 161
>gi|188527161|ref|YP_001909848.1| DNA-cytosine methyltransferase [Helicobacter pylori Shi470]
gi|188143401|gb|ACD47818.1| DNA-cytosine methyltransferase [Helicobacter pylori Shi470]
Length = 309
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQ ++ GLQK +D R +++ +I K P +L +ENV V +T ++
Sbjct: 70 PCQAFSIAGLQKGLNDERGAIVMEMFRII--QAKKPQVLLLENVKNLVSHNKGETLKFIL 127
Query: 69 EILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 101
E L N Y IL+ ++ +P +R R + +
Sbjct: 128 ETLKNLGYFVHYKILNTYEYSTIPQNRERIYIIG 161
>gi|421711360|ref|ZP_16150703.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R030b]
gi|407212509|gb|EKE82371.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R030b]
Length = 309
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQ ++ GLQK +D R +++ +I K P +L +ENV V +T ++
Sbjct: 70 PCQAFSIAGLQKGLNDERGAIVMEMFRII--QAKKPQVLLLENVKNLVSHNKGETLKFIL 127
Query: 69 EILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 101
E L N Y IL+ ++ +P +R R + +
Sbjct: 128 ETLKNLGYFVHYKILNTYEYSTIPQNRERIYIIG 161
>gi|420501190|ref|ZP_14999734.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-30]
gi|393149996|gb|EJC50304.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-30]
Length = 309
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQ ++ GLQK +D R +++ +I K P +L +ENV V +T ++
Sbjct: 70 PCQAFSIAGLQKGLNDERGAIVMEMFRII--QAKKPQVLLLENVKNLVSHNKGETLKFIL 127
Query: 69 EILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 101
E L N Y IL+ ++ +P +R R + +
Sbjct: 128 ETLKNLGYFVHYKILNTYEYSTIPQNRERVYIIG 161
>gi|418166192|ref|ZP_12802848.1| modification methylase HhaI domain protein [Streptococcus
pneumoniae GA17971]
gi|353829788|gb|EHE09918.1| modification methylase HhaI domain protein [Streptococcus
pneumoniae GA17971]
Length = 406
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQ ++ G +K D R F ++L +I P +F+ENV VG + +T +
Sbjct: 86 PCQAFSIAGYRKGFDDDRGDLFFELLRMIEGC--KPRAIFIENVKNMVGHDQGNTFKVIR 143
Query: 69 EILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 101
E L ++Y + +L+ +G +P +R R + +
Sbjct: 144 EALTENNYFIKWKVLNGKDYGNIPQNRERIYIVG 177
>gi|422862666|ref|ZP_16909298.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus
sanguinis SK408]
gi|327474139|gb|EGF19549.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus
sanguinis SK408]
Length = 480
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 52/127 (40%), Gaps = 17/127 (13%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G + D R F +I P LF+ENV G D IL
Sbjct: 104 PCQAFSIAGRRLGFEDIRGTLFFEIARAAKQI--QPRFLFLENVKGLLNHDKGRTFTTIL 161
Query: 72 ANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRKPLSFRC--------QLLNNQLLRS 120
D L + +L+ FGVP +R R F + + S R Q N+++L++
Sbjct: 162 TTLDELGFDVEWQVLNSKDFGVPQNRERVFIIGHSRKKSTRLLFPFRREGQATNSEILKT 221
Query: 121 PSPLLGN 127
LGN
Sbjct: 222 ----LGN 224
>gi|169834211|ref|YP_001693507.1| hypothetical protein SPH_0083 [Streptococcus pneumoniae
Hungary19A-6]
gi|168996713|gb|ACA37325.1| hypothetical protein SPH_0083 [Streptococcus pneumoniae
Hungary19A-6]
Length = 255
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 5/101 (4%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G ++ D R F +I ++ P LF+ENV G D IL
Sbjct: 75 PCQAFSIAGNRRGFEDTRGTLFFEIARFA--SILKPRYLFLENVKGLLNHDRGNTFEVIL 132
Query: 72 ANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRKPLSFR 109
+ D L + +L+ FGVP +R R F + + R
Sbjct: 133 SALDELGYDVEWQVLNSKDFGVPQNRERVFIIGHSRKRGTR 173
>gi|160894995|ref|ZP_02075769.1| hypothetical protein CLOL250_02545 [Clostridium sp. L2-50]
gi|156863426|gb|EDO56857.1| DNA (cytosine-5-)-methyltransferase [Clostridium sp. L2-50]
Length = 447
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQ ++ G ++ +DAR F ++ L+ K P +ENV G + D T ++
Sbjct: 92 PCQAFSIAGRREGFADARGTLFFEVARLVAD--KRPAYFLLENVPGLLSHDKGRTFHTIL 149
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRC 110
L+ Y + +L+ FGVP SR R + + L RC
Sbjct: 150 STLSELGYHVEWKVLNSKDFGVPQSRKRVYIVGY---LDGRC 188
>gi|336437622|ref|ZP_08617326.1| hypothetical protein HMPREF0988_02911 [Lachnospiraceae bacterium
1_4_56FAA]
gi|336004925|gb|EGN34978.1| hypothetical protein HMPREF0988_02911 [Lachnospiraceae bacterium
1_4_56FAA]
Length = 439
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQ ++ G + +DAR F +I L+ K P +ENV G + D T ++
Sbjct: 88 PCQAFSIAGKRGGFADARGTLFFEIARLVAD--KRPAYFILENVPGLLSHDKGRTFHTIL 145
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
L+ Y + +L+ FGVP SR R + +
Sbjct: 146 STLSELGYGVEWKVLNSKDFGVPQSRKRVYLVG 178
>gi|384892407|ref|YP_005766500.1| DNA-cytosine methyltransferase [Helicobacter pylori Cuz20]
gi|384893960|ref|YP_005768009.1| DNA-cytosine methyltransferase [Helicobacter pylori Sat464]
gi|385216220|ref|YP_005776177.1| DNA-cytosine methyltransferase [Helicobacter pylori F32]
gi|386750781|ref|YP_006224001.1| DNA-cytosine methyltransferase [Helicobacter pylori Shi417]
gi|425788977|ref|YP_007016897.1| DNA-cytosine methyltransferase [Helicobacter pylori Aklavik117]
gi|308061704|gb|ADO03592.1| DNA-cytosine methyltransferase [Helicobacter pylori Cuz20]
gi|308063214|gb|ADO05101.1| DNA-cytosine methyltransferase [Helicobacter pylori Sat464]
gi|317180749|dbj|BAJ58535.1| DNA-cytosine methyltransferase [Helicobacter pylori F32]
gi|384557039|gb|AFH97507.1| DNA-cytosine methyltransferase [Helicobacter pylori Shi417]
gi|425627292|gb|AFX90760.1| DNA-cytosine methyltransferase [Helicobacter pylori Aklavik117]
Length = 309
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQ ++ GLQK +D R +++ +I K P +L +ENV V +T ++
Sbjct: 70 PCQAFSIAGLQKGLNDERGAIVMEMFRII--QAKKPQVLLLENVKNLVSHNKGETLKFIL 127
Query: 69 EILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 101
E L N Y IL+ ++ +P +R R + +
Sbjct: 128 ETLKNLGYFVHYKILNTYEYSTIPQNRERIYIIG 161
>gi|385229664|ref|YP_005789580.1| DNA-cytosine methyltransferase [Helicobacter pylori Puno135]
gi|344336102|gb|AEN18063.1| DNA-cytosine methyltransferase [Helicobacter pylori Puno135]
Length = 309
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQ ++ GLQK +D R +++ +I K P +L +ENV V +T ++
Sbjct: 70 PCQAFSIAGLQKGLNDERGAIVMEMFRII--QAKKPQVLLLENVKNLVSHNKGETLKFIL 127
Query: 69 EILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 101
E L N Y IL+ ++ +P +R R + +
Sbjct: 128 ETLKNLGYFVHYKILNTYEYSTIPQNRERVYIIG 161
>gi|385220188|ref|YP_005781660.1| DNA-cytosine methyltransferase [Helicobacter pylori India7]
gi|317008995|gb|ADU79575.1| DNA-cytosine methyltransferase [Helicobacter pylori India7]
Length = 309
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQ ++ GLQK +D R +++ +I K P +L +ENV V +T ++
Sbjct: 70 PCQAFSIAGLQKGLNDERGAIVMEMFRII--QAKKPQVLLLENVKNLVSHNKGETLKFIL 127
Query: 69 EILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 101
E L N Y IL+ ++ +P +R R + +
Sbjct: 128 ETLKNLGYFVHYKILNTYEYSTIPQNRERIYIIG 161
>gi|291549830|emb|CBL26092.1| DNA-methyltransferase (dcm) [Ruminococcus torques L2-14]
Length = 410
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQ ++ G + DAR F + ++P LF ENV G T D T+A +
Sbjct: 155 PCQAFSYAGKRLGLEDARGTLFYH-YAIFLQKLQPKIFLF-ENVKGLLTHDKGRTYATIT 212
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 106
+I + Y Q+ +L+ +GVP R R + R L
Sbjct: 213 DIFEQAGYTIQKKVLNAWDYGVPQKRERLITIGIRNDL 250
>gi|424782768|ref|ZP_18209614.1| DNA-cytosine methyltransferase [Campylobacter showae CSUNSWCD]
gi|421959589|gb|EKU11198.1| DNA-cytosine methyltransferase [Campylobacter showae CSUNSWCD]
Length = 393
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQ +++ G + D R F +I +I K P +ENV ++ D T+ +
Sbjct: 148 PCQAFSQAGKKLGFEDTRGTLFFEIARIIKE--KRPKAFLLENVKNLKSHDKGRTYKTIE 205
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
+ L + +Y IL FGVP +R R + +
Sbjct: 206 KTLKDLNYDVHSIILKAKDFGVPQNRERIYIVG 238
>gi|425464802|ref|ZP_18844112.1| Modification methylase HpaII [Microcystis aeruginosa PCC 9809]
gi|389833097|emb|CCI22700.1| Modification methylase HpaII [Microcystis aeruginosa PCC 9809]
Length = 347
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G + DAR F ++ ++ K P +ENV G D + IL
Sbjct: 71 PCQAFSIAGRKHGFEDARGTLFFEVARILHE--KKPKAFILENVQGLVHHDRGKTLKTIL 128
Query: 72 ANSDYLTQEF--------ILSPLQFGVPYSRPRYFCLAKRKPLSF 108
D L ++ IL+ FGVP +RPR F + R+ L+
Sbjct: 129 ---DILEKDLHYFVPSPQILNARYFGVPQNRPRIFIVGFREDLNI 170
>gi|119510471|ref|ZP_01629604.1| DNA cytosine methylase [Nodularia spumigena CCY9414]
gi|119464893|gb|EAW45797.1| DNA cytosine methylase [Nodularia spumigena CCY9414]
Length = 727
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 4/101 (3%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLF--VENVVGFETSDTHAKMIE 69
PCQP++ G +K D R F I E+I H + PP ++ V++++ + T ++
Sbjct: 74 PCQPFSICGHRKGFHDTRGTLFFHICEIIEH-IHPPVVVLENVKHILHHDQGRTLDVILY 132
Query: 70 ILANSDYLTQEFILSPLQFGVPYSRPR-YFCLAKRKPLSFR 109
L + Y+ I++ FG+P +R R F K K +F+
Sbjct: 133 SLEDMGYIVNYEIVNSRDFGLPQNRERVVFVATKDKKFNFK 173
>gi|428220506|ref|YP_007104676.1| DNA-methyltransferase Dcm [Synechococcus sp. PCC 7502]
gi|427993846|gb|AFY72541.1| DNA-methyltransferase Dcm [Synechococcus sp. PCC 7502]
Length = 341
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 6/108 (5%)
Query: 5 HAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFET 60
H LL+ PCQP++ G K D R F I ++ K P +ENV G
Sbjct: 71 HDILLAGFPCQPFSICGDLKGFEDVRGTLFFDIARIL--EAKQPKAFVLENVKQLKGHNE 128
Query: 61 SDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 108
T ++++ L Y T IL+ L +G+P R R F + ++ F
Sbjct: 129 GKTLQRILQTLQELGYHTDYKILNALNYGLPQKRERIFIIGFKESCHF 176
>gi|420416566|ref|ZP_14915675.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4044]
gi|393036995|gb|EJB38033.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4044]
Length = 309
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQ ++ GLQK +D R +++ +I K P +L +ENV V +T ++
Sbjct: 70 PCQAFSIAGLQKGLNDERGAIVMEMFRII--QAKKPQVLLLENVKNLVSHNKGETLKFIL 127
Query: 69 EILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 101
E L N Y IL+ ++ +P +R R + +
Sbjct: 128 ETLKNLGYFVHYKILNTYEYSTIPQNRERIYIIG 161
>gi|365154735|ref|ZP_09351161.1| modification methylase ScrFIA [Campylobacter sp. 10_1_50]
gi|363648972|gb|EHL88107.1| modification methylase ScrFIA [Campylobacter sp. 10_1_50]
Length = 393
Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQ +++ G + D R F +I +I K P +ENV ++ D T+ +
Sbjct: 148 PCQAFSQAGKKLGFEDTRGTLFFEIARIIKE--KRPKAFLLENVKNLKSHDKGRTYKTIE 205
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
+ L + +Y IL FGVP +R R + +
Sbjct: 206 KTLKDLNYDVHSIILKAKDFGVPQNRERIYIVG 238
>gi|421721497|ref|ZP_16160772.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R055a]
gi|407224832|gb|EKE94607.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R055a]
Length = 351
Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 9/101 (8%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L++L+L+ P M ENVV +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKMFVFENVVSLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
++ Y+ + IL+ L +GVP R R + K
Sbjct: 126 FKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALK 166
>gi|213972219|ref|ZP_03400299.1| cytosine-specific DNA methylase [Pseudomonas syringae pv. tomato
T1]
gi|289626827|ref|ZP_06459781.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. aesculi
str. NCPPB 3681]
gi|301386398|ref|ZP_07234816.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. tomato
Max13]
gi|302062510|ref|ZP_07254051.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. tomato
K40]
gi|422585424|ref|ZP_16660502.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|213923026|gb|EEB56641.1| cytosine-specific DNA methylase [Pseudomonas syringae pv. tomato
T1]
gi|330870292|gb|EGH05001.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. aesculi
str. 0893_23]
Length = 382
Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 8/105 (7%)
Query: 6 AWLLSPPCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVKPPHMLFVENVVGFETS- 61
AW S PCQ + G R+ + F K+++ + + P M+ +ENV G TS
Sbjct: 67 AWA-SFPCQDLSLAGAGAGLKGHRSGTFWPFWKLMKALGEEDRAPRMIVLENVCGAITSH 125
Query: 62 --DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
A + L+N Y +++ + F +P SRPR F +A RK
Sbjct: 126 DGKDFAAISAALSNGGYRFGAVVMNAVHF-LPQSRPRLFIIAVRK 169
>gi|23100791|ref|NP_694258.1| cytosine-specific methyltransferase [Oceanobacillus iheyensis
HTE831]
gi|50897489|sp|Q8EL95.1|MT36_OCEIH RecName: Full=Putative modification methylase OB3336; AltName:
Full=Cytosine-specific methyltransferase; AltName:
Full=M.OihORF3336P
gi|22779025|dbj|BAC15292.1| cytosine-specific methyltransferase [Oceanobacillus iheyensis
HTE831]
Length = 460
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 14/110 (12%)
Query: 10 SPPCQPYTRQGLQK---------QSSDARAFSFLKILELIPHTVKPPHMLFVENV---VG 57
PPCQ Y++ G K Q +DAR + L+ H +++ +ENV V
Sbjct: 94 GPPCQAYSKIGRAKLKSLGEERRQENDARGKLYENFLDYALHV--DANVIVMENVPEAVN 151
Query: 58 FETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 107
+ + + +IL N Y +L+ FGVP +R R F +A +K +
Sbjct: 152 YGGVNIPDTVCDILINKGYDAIWTVLNAADFGVPQTRVRLFVMAIKKDIG 201
>gi|282859944|ref|ZP_06269032.1| DNA (cytosine-5-)-methyltransferase [Prevotella bivia JCVIHMP010]
gi|424899947|ref|ZP_18323489.1| DNA-methyltransferase Dcm [Prevotella bivia DSM 20514]
gi|282587347|gb|EFB92564.1| DNA (cytosine-5-)-methyltransferase [Prevotella bivia JCVIHMP010]
gi|388592147|gb|EIM32386.1| DNA-methyltransferase Dcm [Prevotella bivia DSM 20514]
Length = 448
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 9/105 (8%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G + + R F + E+I K P F+ENV G D K I +
Sbjct: 184 PCQAFSLAGKRLGFEETRGTLFFDVAEIIKR--KQPKAFFLENVKGLLIHD-KGKTINTI 240
Query: 72 AN------SDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRC 110
N + Y+ +L+ FGVP R R + + RK L+ +
Sbjct: 241 LNVLREDLNYYVPDPEVLNAANFGVPQHRERVYIVGFRKDLNIKA 285
>gi|166368121|ref|YP_001660394.1| C-5 cytosine-specific DNA-methylase [Microcystis aeruginosa
NIES-843]
gi|166090494|dbj|BAG05202.1| C-5 cytosine-specific DNA-methylase [Microcystis aeruginosa
NIES-843]
Length = 347
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G + DAR F ++ ++ K P +ENV G D + IL
Sbjct: 71 PCQAFSIAGRKHGFEDARGTLFFEVARILHE--KKPKAFILENVQGLVHHDRGKTLKTIL 128
Query: 72 ANSDYLTQEF--------ILSPLQFGVPYSRPRYFCLAKRKPLSF 108
D L ++ IL+ FGVP +RPR F + R+ L+
Sbjct: 129 ---DILEKDLHYFVPSPQILNARYFGVPQNRPRIFIVGFREDLNI 170
>gi|423374972|ref|ZP_17352309.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus AND1407]
gi|401093188|gb|EJQ01303.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus AND1407]
Length = 600
Score = 44.3 bits (103), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 5/101 (4%)
Query: 11 PPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKM 67
PCQ ++ G ++ D R F + LI P + ENV G D T A M
Sbjct: 286 SPCQSFSMVGKRRGLQDTRGTLFYEYARLIEEV--QPKVFIYENVKGLINHDGGNTWATM 343
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 108
++ + +Y + +L+ +G+P +R R F + RK +
Sbjct: 344 QQVFDDLNYNWEYQVLNSKNYGIPQNRERLFVVGFRKDIKL 384
>gi|166237008|gb|ABY86226.1| BsaHI DNA methyltransferase [Geobacillus stearothermophilus]
Length = 323
Score = 44.3 bits (103), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 6/92 (6%)
Query: 10 SPPCQPYTRQGLQKQSSDAR-AFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMI 68
PPCQ Y+ G +K+ +A F I+ VKP + L +ENV + + + K +
Sbjct: 71 GPPCQDYSSAGKRKEDENANLTIDFANIIA----NVKPKYFL-MENVDQIKKYNAYHKAV 125
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCL 100
EI + Y IL GVP R R+F
Sbjct: 126 EIFRKAGYGLSAKILDASLCGVPQKRKRFFLF 157
>gi|154502686|ref|ZP_02039746.1| hypothetical protein RUMGNA_00499 [Ruminococcus gnavus ATCC 29149]
gi|153796569|gb|EDN78989.1| DNA (cytosine-5-)-methyltransferase [Ruminococcus gnavus ATCC
29149]
Length = 458
Score = 44.3 bits (103), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQ ++ G + +DAR F +I L+ K P +ENV G + D T ++
Sbjct: 107 PCQAFSIAGKRGGFADARGTLFFEIARLVAD--KRPAYFILENVPGLLSHDKGRTFHTIL 164
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
L+ Y + +L+ FGVP SR R + +
Sbjct: 165 STLSELGYGVEWKVLNSKDFGVPQSRKRVYLVG 197
>gi|425437022|ref|ZP_18817451.1| Modification methylase HpaII [Microcystis aeruginosa PCC 9432]
gi|389678124|emb|CCH93007.1| Modification methylase HpaII [Microcystis aeruginosa PCC 9432]
Length = 347
Score = 44.3 bits (103), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G + DAR F ++ ++ K P +ENV G D + IL
Sbjct: 71 PCQAFSIAGRKHGFEDARGTLFFEVARILHE--KKPKAFILENVQGLVHHDRGKTLKTIL 128
Query: 72 ANSDYLTQEF--------ILSPLQFGVPYSRPRYFCLAKRKPLSF 108
D L ++ IL+ FGVP +RPR F + R+ L+
Sbjct: 129 ---DILEKDLHYFVPSPQILNARYFGVPQNRPRIFIVGFREDLNI 170
>gi|425451275|ref|ZP_18831097.1| Modification methylase HpaII [Microcystis aeruginosa PCC 7941]
gi|389767477|emb|CCI07114.1| Modification methylase HpaII [Microcystis aeruginosa PCC 7941]
Length = 342
Score = 44.3 bits (103), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G + DAR F ++ ++ K P +ENV G D + IL
Sbjct: 71 PCQAFSIAGRKHGFEDARGTLFFEVARILHE--KKPKAFILENVQGLVHHDRGKTLKTIL 128
Query: 72 ANSDYLTQEF--------ILSPLQFGVPYSRPRYFCLAKRKPLSF 108
D L ++ IL+ FGVP +RPR F + R+ L+
Sbjct: 129 ---DILEKDLHYFVPSPQILNARYFGVPQNRPRIFIVGFREDLNI 170
>gi|420539629|ref|ZP_15037948.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M5]
gi|393147314|gb|EJC47639.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M5]
Length = 338
Score = 44.3 bits (103), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 9/101 (8%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L++L+L+ P + ENVVG +
Sbjct: 58 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFIFENVVGLMSMQKGQL 112
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
++ Y+ + IL+ L +G P R R + K
Sbjct: 113 FQRICNAFKERGYILEHAILNALDYGAPQVRERVILVGTLK 153
>gi|322376648|ref|ZP_08051141.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus
sp. M334]
gi|321282455|gb|EFX59462.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus
sp. M334]
Length = 452
Score = 44.3 bits (103), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 51/127 (40%), Gaps = 17/127 (13%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G + D R F +I P LF+ENV G D IL
Sbjct: 76 PCQAFSIAGRRLGFEDTRGTLFFEIARAAKQI--QPRFLFLENVKGLLNHDKGRTFTTIL 133
Query: 72 ANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRK--------PLSFRCQLLNNQLLRS 120
D L + +L+ FGVP +R R F + + P Q N+++L++
Sbjct: 134 TTLDELGFDVEWQVLNSKDFGVPQNRERVFIIGHSRKKGTRLLFPFRREGQATNSEILKT 193
Query: 121 PSPLLGN 127
LGN
Sbjct: 194 ----LGN 196
>gi|288904476|ref|YP_003429697.1| DNA methylase [Streptococcus gallolyticus UCN34]
gi|288731201|emb|CBI12749.1| Putative DNA methylase [Streptococcus gallolyticus UCN34]
Length = 366
Score = 44.3 bits (103), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G ++ D R F ++ ++ P LF+ENV G + D IL
Sbjct: 75 PCQAFSIAGNRRGFEDTRGTLFFEVARFA--SILRPKYLFLENVKGLLSHDNGTTFETIL 132
Query: 72 ANSDYLTQEF---ILSPLQFGVPYSRPRYFCLA 101
D L + +L+ FGVP +R R F +
Sbjct: 133 RTLDELGYDVEWQVLNSKDFGVPQNRERVFLIG 165
>gi|425442125|ref|ZP_18822382.1| Modification methylase HpaII [Microcystis aeruginosa PCC 9717]
gi|389716960|emb|CCH98858.1| Modification methylase HpaII [Microcystis aeruginosa PCC 9717]
Length = 347
Score = 44.3 bits (103), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G + DAR F ++ ++ K P +ENV G D + IL
Sbjct: 71 PCQAFSIAGRKHGFEDARGTLFFEVARILHE--KKPKAFILENVQGLVHHDRGKTLKTIL 128
Query: 72 ANSDYLTQEF--------ILSPLQFGVPYSRPRYFCLAKRKPLSF 108
D L ++ IL+ FGVP +RPR F + R+ L+
Sbjct: 129 ---DILEKDLHYFVPSPQILNARYFGVPQNRPRIFIVGFREDLNI 170
>gi|376002334|ref|ZP_09780170.1| Modification methylase M.Asp8005ORF1636 (Cytosine-specific
methyltransferase M.Asp8005ORF1636) (prototype M.HgiCI)
[Arthrospira sp. PCC 8005]
gi|375329328|emb|CCE15923.1| Modification methylase M.Asp8005ORF1636 (Cytosine-specific
methyltransferase M.Asp8005ORF1636) (prototype M.HgiCI)
[Arthrospira sp. PCC 8005]
Length = 429
Score = 44.3 bits (103), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 5/100 (5%)
Query: 5 HAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTH 64
H L PCQ ++ G + D R F +IL LI + P ENV G T D
Sbjct: 69 HILLAGFPCQSFSYAGKKAGFGDTRGTLFFEILRLIDS--QQPQAFIFENVRGLVTHDQG 126
Query: 65 AKMIEI---LANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
+ I + + Y F+L+ +GVP +R R + +
Sbjct: 127 KTINTIRQKMQDRGYSFDLFLLNSSNYGVPQNRVRAYMMG 166
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 262 LRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 312
+R TPRE A L FP FQ H + + Y LGNS++I VV + Q L
Sbjct: 366 VRRITPREAARLQGFPDSFQL--HPNQNKAYRQLGNSVTIPVVKAIAQELL 414
>gi|425440571|ref|ZP_18820869.1| Modification methylase HpaII [Microcystis aeruginosa PCC 9717]
gi|389718951|emb|CCH97155.1| Modification methylase HpaII [Microcystis aeruginosa PCC 9717]
Length = 347
Score = 44.3 bits (103), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G + DAR F ++ ++ K P +ENV G D + IL
Sbjct: 71 PCQAFSIAGRKHGFEDARGTLFFEVARILHE--KKPKAFILENVQGLVHHDRGKTLKTIL 128
Query: 72 ANSDYLTQEF--------ILSPLQFGVPYSRPRYFCLAKRKPLSF 108
D L ++ IL+ FGVP +RPR F + R+ L+
Sbjct: 129 ---DILEKDLHYFVPSPQILNARYFGVPQNRPRIFIVGFREDLNI 170
>gi|384887373|ref|YP_005761884.1| DNA-cytosine methyltransferase [Helicobacter pylori 52]
gi|261839203|gb|ACX98968.1| DNA-cytosine methyltransferase [Helicobacter pylori 52]
Length = 309
Score = 44.3 bits (103), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQ ++ GLQK +D R +++ +I K P +L +ENV V +T ++
Sbjct: 70 PCQAFSIAGLQKGLNDERGAIVMEMFRII--QAKKPQVLLLENVKNLVSHNKGETLKFIL 127
Query: 69 EILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 101
E L N Y IL+ ++ +P +R R + +
Sbjct: 128 ETLKNLGYFVHYKILNTYEYSTIPQNRERIYIVG 161
>gi|197303495|ref|ZP_03168534.1| hypothetical protein RUMLAC_02217 [Ruminococcus lactaris ATCC
29176]
gi|197297493|gb|EDY32054.1| DNA (cytosine-5-)-methyltransferase [Ruminococcus lactaris ATCC
29176]
Length = 496
Score = 44.3 bits (103), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 55/127 (43%), Gaps = 23/127 (18%)
Query: 12 PCQPYTRQGLQKQSSDA-RAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKM 67
PCQ ++R G Q D R F I ++I T P +F+ENV V + +T +
Sbjct: 75 PCQAFSRVGKQLGFRDTTRGTIFFDIADIISRT--NPRAVFLENVENLVSHDKGNTIETI 132
Query: 68 IEIL----------------ANSDYLTQEFILSPLQFGVPYSRPRYFCLA-KRKPLSFRC 110
I+ L N Y + + +FG+P +RPR + +A +K
Sbjct: 133 IKTLEEELEYRVIGVTLDENGNYSYSRATLVRNTREFGLPQNRPRVYIMAFSKKIYGNAI 192
Query: 111 QLLNNQL 117
+LLN QL
Sbjct: 193 KLLNAQL 199
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 10/74 (13%)
Query: 249 KNKGKASSLKEQHLRYFTPREVANLHSFPG----------DFQFPHHLSLRQRYALLGNS 298
K GK + L + +R TP E L F G F FP + Q+Y GNS
Sbjct: 289 KVAGKKTVLNSEGIRVMTPNEWGRLQGFIGYGFVDENGVDSFAFPEDTTNGQKYKQFGNS 348
Query: 299 LSIAVVAPLLQYLF 312
+SI V+ + +++
Sbjct: 349 VSIPVIRSMAEFML 362
>gi|153852755|ref|ZP_01994192.1| hypothetical protein DORLON_00174 [Dorea longicatena DSM 13814]
gi|149754397|gb|EDM64328.1| DNA (cytosine-5-)-methyltransferase [Dorea longicatena DSM 13814]
Length = 367
Score = 44.3 bits (103), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQ ++ G ++ +DAR F ++ L+ K P +ENV G + D T ++
Sbjct: 12 PCQAFSIAGRREGFADARGTLFFEVARLVAD--KRPAYFLLENVPGLLSHDKGRTFHTIL 69
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRC 110
L+ Y + +L+ FGVP SR R + + L RC
Sbjct: 70 STLSELGYHVEWKVLNSKDFGVPQSRKRVYIVGY---LDGRC 108
>gi|127420|sp|P19888.1|MTBA_BACAR RecName: Full=Modification methylase BanI; Short=M.BanI; AltName:
Full=Cytosine-specific methyltransferase BanI
gi|216242|dbj|BAA00613.1| BanI modification methylase [Aneurinibacillus aneurinilyticus]
Length = 428
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 5/93 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQP++ G Q+ D R F ++ ++ P +ENV G T D T +I
Sbjct: 75 PCQPFSYAGKQQGFGDTRGTLFFEVERVLRDN--RPKAFLLENVRGLVTHDKGRTLKTII 132
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
L Y +L+ FGVP +R R + L
Sbjct: 133 SKLEELGYGVSYLLLNSSTFGVPQNRVRIYILG 165
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 263 RYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 312
R TPRE A L FP DF H + Y LGNS+++ VV +++ LF
Sbjct: 364 RRITPRECARLQGFPDDFIL--HSNDNFAYKQLGNSVTVKVVEKVIEDLF 411
>gi|86137701|ref|ZP_01056277.1| DNA modification methylase M.NGOI [Roseobacter sp. MED193]
gi|85825293|gb|EAQ45492.1| DNA modification methylase M.NGOI [Roseobacter sp. MED193]
Length = 319
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 6/99 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS---DTHAKMI 68
PC P++ G Q D R F + ++ T P + +ENV GF + D K+
Sbjct: 74 PCPPFSVAGKQLGEKDERNL-FDDAIHIVDATR--PRAVMIENVRGFLDAAFHDYREKLK 130
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 107
+ L+ Y T +L+ FGVP RPR +A RK S
Sbjct: 131 KQLSKLGYETDWRLLNASDFGVPQLRPRVAIVALRKEYS 169
>gi|372268774|ref|ZP_09504822.1| C-5 cytosine-specific DNA methylase [Alteromonas sp. S89]
Length = 412
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 60/135 (44%), Gaps = 21/135 (15%)
Query: 10 SPPCQPYTR-----QGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG--FETSD 62
PPCQP+++ +G K+ D RA + L ++ +KP L +ENV G F+ D
Sbjct: 77 GPPCQPFSKSAYWSKGDTKRLDDPRADTLTAYLRVL-RDLKPKAFL-LENVQGMTFKGKD 134
Query: 63 THAKMIEIL-------ANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNN 115
K++E + S+Y +L+ +GVP R R F + R FR +
Sbjct: 135 EGLKLLENIIQKINEETGSNYSFTWQVLNAADYGVPQMRERVFLVGSRDGKVFRFPAATH 194
Query: 116 QLLRSPSPLLGNDDM 130
Q P L DD+
Sbjct: 195 Q-----DPELAVDDL 204
>gi|346307000|ref|ZP_08849148.1| hypothetical protein HMPREF9457_00857 [Dorea formicigenerans
4_6_53AFAA]
gi|345907364|gb|EGX77075.1| hypothetical protein HMPREF9457_00857 [Dorea formicigenerans
4_6_53AFAA]
Length = 449
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G ++ +DAR F +I L+ T K P +ENV G + D IL
Sbjct: 99 PCQAFSIAGKREGFADARGTLFFEIARLV--TDKRPAYFILENVPGLLSHDKGRTFHTIL 156
Query: 72 AN---SDYLTQEFILSPLQFGVPYSRPRYFCLA 101
+ Y + +L+ FGVP SR R + +
Sbjct: 157 STFHELGYYVEWKVLNSKDFGVPQSRKRVYLIG 189
>gi|428772287|ref|YP_007164075.1| DNA-cytosine methyltransferase [Cyanobacterium stanieri PCC 7202]
gi|428686566|gb|AFZ46426.1| DNA-cytosine methyltransferase [Cyanobacterium stanieri PCC 7202]
Length = 652
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 16/110 (14%)
Query: 12 PCQPYTRQGLQKQSSD----ARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM 67
PCQP+++ G ++ +D R F I++++ +K P F+ENV G + D
Sbjct: 81 PCQPFSQAGYKRGFNDNHKSERGNLFFNIVDILE--IKQPKAFFLENVRGLISHDK-GNT 137
Query: 68 IEILANSDYLTQEF-------ILSPLQFGVPYSRPRYFCLAKRKPLSFRC 110
+I+ D L QE I+ +G+P RPR F + R F+
Sbjct: 138 FKII--RDILEQELNYSFYYQIVKASDYGLPQLRPRTFIIGFRDEGFFKS 185
>gi|403744257|ref|ZP_10953589.1| DNA-cytosine methyltransferase [Alicyclobacillus hesperidum
URH17-3-68]
gi|403122210|gb|EJY56447.1| DNA-cytosine methyltransferase [Alicyclobacillus hesperidum
URH17-3-68]
Length = 282
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 43/103 (41%), Gaps = 5/103 (4%)
Query: 4 AHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKP--PHMLFVENVVGFETS 61
A +W PCQ + G + + R+ F ++ LI + P L ENVVGF +
Sbjct: 64 ADSWTFGFPCQDLSVAGRHRGFTGERSSLFFTVMRLIRELPEDHRPEWLVAENVVGFLSC 123
Query: 62 DTHAKMIE---ILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
+ LA S Y + +L FG+P R R F +
Sbjct: 124 KRGYDFLAAQTALAESGYDCEWDVLGATSFGIPQHRDRVFLVG 166
>gi|390438785|ref|ZP_10227224.1| Modification methylase HpaII [Microcystis sp. T1-4]
gi|389837791|emb|CCI31348.1| Modification methylase HpaII [Microcystis sp. T1-4]
Length = 347
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G + DAR F ++ ++ K P +ENV G D + IL
Sbjct: 71 PCQAFSIAGRKHGFEDARGTLFFEVARILHE--KKPKAFILENVQGLVHHDRGKTLKTIL 128
Query: 72 ANSDYLTQEF--------ILSPLQFGVPYSRPRYFCLAKRKPLSF 108
D L ++ IL+ FGVP +RPR F + R+ L+
Sbjct: 129 ---DILEKDLHYFVPSPQILNARYFGVPQNRPRIFIVGFREDLNI 170
>gi|443662730|ref|ZP_21133000.1| modification methylase HpaII [Microcystis aeruginosa DIANCHI905]
gi|159027151|emb|CAO86782.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443332022|gb|ELS46652.1| modification methylase HpaII [Microcystis aeruginosa DIANCHI905]
Length = 347
Score = 44.3 bits (103), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G + DAR F ++ ++ K P +ENV G D + IL
Sbjct: 71 PCQAFSIAGRKHGFEDARGTLFFEVARILHE--KKPKAFILENVQGLVHHDRGKTLKTIL 128
Query: 72 ANSDYLTQEF--------ILSPLQFGVPYSRPRYFCLAKRKPLSF 108
D L ++ IL+ FGVP +RPR F + R+ L+
Sbjct: 129 ---DILEKDLHYFVPSPQILNARYFGVPQNRPRIFIVGFREDLNI 170
>gi|440756964|ref|ZP_20936164.1| modification methylase HpaII [Microcystis aeruginosa TAIHU98]
gi|440172993|gb|ELP52477.1| modification methylase HpaII [Microcystis aeruginosa TAIHU98]
Length = 347
Score = 44.3 bits (103), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G + DAR F ++ ++ K P +ENV G D + IL
Sbjct: 71 PCQAFSIAGRKHGFEDARGTLFFEVARILHE--KKPKAFILENVQGLVHHDRGKTLKTIL 128
Query: 72 ANSDYLTQEF--------ILSPLQFGVPYSRPRYFCLAKRKPLSF 108
D L ++ IL+ FGVP +RPR F + R+ L+
Sbjct: 129 ---DILEKDLHYFVPSPQILNARYFGVPQNRPRIFIVGFREDLNI 170
>gi|425447575|ref|ZP_18827560.1| Modification methylase HpaII [Microcystis aeruginosa PCC 9443]
gi|389731828|emb|CCI04164.1| Modification methylase HpaII [Microcystis aeruginosa PCC 9443]
Length = 347
Score = 44.3 bits (103), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 13/104 (12%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G + DAR F ++ ++ K P +ENV G D + IL
Sbjct: 71 PCQAFSIAGRKHGFEDARGTLFFEVARILHE--KKPKAFILENVQGLVHHDGGKTLKTIL 128
Query: 72 ANSDYLTQEF--------ILSPLQFGVPYSRPRYFCLAKRKPLS 107
D L ++ IL+ FGVP +RPR F + R+ L+
Sbjct: 129 ---DILEKDLHYFVPSPQILNARYFGVPQNRPRIFIVGFREDLN 169
>gi|336434561|ref|ZP_08614346.1| hypothetical protein HMPREF0991_03465 [Lachnospiraceae bacterium
2_1_58FAA]
gi|336012560|gb|EGN42465.1| hypothetical protein HMPREF0991_03465 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 470
Score = 44.3 bits (103), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQ ++ G + +DAR F +I L+ K P +ENV G + D T ++
Sbjct: 119 PCQAFSIAGKRGGFADARGTLFFEIARLVAD--KRPAYFILENVPGLLSHDKGRTFHTIL 176
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
L+ Y + +L+ FGVP SR R + +
Sbjct: 177 STLSELGYGVEWKVLNSKDFGVPQSRKRVYLVG 209
>gi|425462557|ref|ZP_18842030.1| Modification methylase HpaII [Microcystis aeruginosa PCC 9808]
gi|389824352|emb|CCI26716.1| Modification methylase HpaII [Microcystis aeruginosa PCC 9808]
Length = 347
Score = 44.3 bits (103), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G + DAR F ++ ++ K P +ENV G D + IL
Sbjct: 71 PCQAFSIAGRKHGFEDARGTLFFEVARILHE--KKPKAFILENVQGLVHHDRGKTLKTIL 128
Query: 72 ANSDYLTQEF--------ILSPLQFGVPYSRPRYFCLAKRKPLSF 108
D L ++ IL+ FGVP +RPR F + R+ L+
Sbjct: 129 ---DILEKDLHYFVPSPQILNARYFGVPQNRPRIFIVGFREDLNI 170
>gi|419718252|ref|ZP_14245581.1| modification methylase HpaII [Lachnoanaerobaculum saburreum F0468]
gi|383305602|gb|EIC96958.1| modification methylase HpaII [Lachnoanaerobaculum saburreum F0468]
Length = 346
Score = 44.3 bits (103), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 6/107 (5%)
Query: 5 HAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFET 60
H LL+ PCQ ++ G ++ DAR F + +I P ++F ENV V +
Sbjct: 67 HDILLAGFPCQAFSLAGHKRGFEDARGTLFFDVARIIKK--HKPKIVFCENVKNLVNHDR 124
Query: 61 SDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 107
T + IL Y +L+ FGVP +R R + +A R ++
Sbjct: 125 GRTFQVIKNILEELGYAVFYQVLNSKNFGVPQNRERIYIVAFRNDIA 171
>gi|321156918|emb|CBW38908.1| putative DNA methylase [Streptococcus pneumoniae]
Length = 452
Score = 44.3 bits (103), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 52/127 (40%), Gaps = 17/127 (13%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G + D R F +I P LF+ENV G D IL
Sbjct: 76 PCQAFSIAGRRLGFEDIRGTLFFEIARAAKQI--QPRFLFLENVKGLLNHDKGRTFTTIL 133
Query: 72 ANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRKPLSFRC--------QLLNNQLLRS 120
D L + +L+ FGVP +R R F + + S R Q N+++L++
Sbjct: 134 TTLDELGFDVEWQVLNSKDFGVPQNRERVFIIGHSRKKSTRLLFPFRREGQATNSEILKT 193
Query: 121 PSPLLGN 127
LGN
Sbjct: 194 ----LGN 196
>gi|452746388|ref|ZP_21946208.1| modification methylase DdeI [Pseudomonas stutzeri NF13]
gi|452009641|gb|EME01854.1| modification methylase DdeI [Pseudomonas stutzeri NF13]
Length = 453
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 19/119 (15%)
Query: 5 HAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDT- 63
H PPCQ ++ G ++ SD R F K +E++ + P L +ENV G + +
Sbjct: 100 HVLAGGPPCQGFSFAG-KRNESDPRNQLFEKYVEMV--QLIRPSALVIENVPGMKVAHAA 156
Query: 64 ---------------HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 107
+ K++E L Y I+ +FGVP RPR + RK L+
Sbjct: 157 RGWKQLGLLVKPQSFYNKLVESLDRIGYEVLGKIVDSSRFGVPQKRPRLIVIGLRKDLA 215
>gi|431800691|ref|YP_007227594.1| C-5 cytosine-specific DNA methylase [Pseudomonas putida HB3267]
gi|430791456|gb|AGA71651.1| C-5 cytosine-specific DNA methylase [Pseudomonas putida HB3267]
Length = 407
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 59/133 (44%), Gaps = 30/133 (22%)
Query: 6 AWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPH---TVKPPHMLFVENVVGFETSD 62
AW S PCQ ++ GL S A + F K ELI T + P ++ +ENVVG
Sbjct: 78 AWA-SSPCQNFSSAGLGDGLSGASSSVFTKWWELIASKTATGREPKIVVLENVVG----- 131
Query: 63 THAKMIEILANSDY--LTQEFILSPLQFGV---------PYSRPRYFCLAKRKPLSFRCQ 111
+++ D+ ++Q F+ +FGV P SRPR F +A + +
Sbjct: 132 ----LLQSRGGLDFKLISQSFVECGYRFGVTMIDAINFLPQSRPRIFFVAVKIDVELPSS 187
Query: 112 LLNNQLLRSPSPL 124
LRS SP+
Sbjct: 188 ------LRSDSPI 194
>gi|383449604|ref|YP_005356325.1| Type II modification methyltransferase HpaII [Flavobacterium
indicum GPTSA100-9]
gi|380501226|emb|CCG52268.1| Type II modification methyltransferase HpaII [Flavobacterium
indicum GPTSA100-9]
Length = 422
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQ ++ G + D R F + E+I K P +F+ENV G + T A ++
Sbjct: 167 PCQAFSIAGKRGGFEDTRGTLFFDVAEIIKR--KQPKAIFLENVKGLRNHNGGKTLATIL 224
Query: 69 EILAN--SDYLTQEFILSPLQFGVPYSRPRYFCLA 101
+L N ++ + I++ FGVP +R R + +
Sbjct: 225 NVLRNDLGYFIPEPQIINAKDFGVPQNRERIYIVG 259
>gi|331090242|ref|ZP_08339130.1| hypothetical protein HMPREF1025_02713 [Lachnospiraceae bacterium
3_1_46FAA]
gi|330402188|gb|EGG81760.1| hypothetical protein HMPREF1025_02713 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 464
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 4 AHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIP---HTVKPPHMLF--VENVVGF 58
A W PCQ + G Q+ R+ + I++LI + KP ++L V+N++
Sbjct: 67 ADIWCFGFPCQDISVAGKQRGLVGERSGIYYNIIDLIKGKEESDKPTYLLVENVKNLLSI 126
Query: 59 ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 109
+ A ++ + + Y + +L+ FGVP +R R F +A + R
Sbjct: 127 NSGFDFASVLSEMDEAGYDCRWQVLNSKDFGVPQNRERVFIIANLRSRGGR 177
>gi|421491166|ref|ZP_15938533.1| putative modification methylase HpaII [Streptococcus anginosus
SK1138]
gi|400372163|gb|EJP25112.1| putative modification methylase HpaII [Streptococcus anginosus
SK1138]
Length = 452
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 51/127 (40%), Gaps = 17/127 (13%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G + D R F +I P LF+ENV G D IL
Sbjct: 76 PCQAFSIAGRRLGFEDTRGTLFFEIARAAKQI--QPRFLFLENVKGLLNHDKGRTFTTIL 133
Query: 72 ANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRK--------PLSFRCQLLNNQLLRS 120
D L + +L+ FGVP +R R F + + P Q N+++L++
Sbjct: 134 TTLDELGFDVEWQVLNSKDFGVPQNRERVFIIGHSRKKGTRLLFPFRREGQATNSEILKT 193
Query: 121 PSPLLGN 127
LGN
Sbjct: 194 ----LGN 196
>gi|355575378|ref|ZP_09044916.1| hypothetical protein HMPREF1008_00893 [Olsenella sp. oral taxon 809
str. F0356]
gi|354817688|gb|EHF02187.1| hypothetical protein HMPREF1008_00893 [Olsenella sp. oral taxon 809
str. F0356]
Length = 315
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 56/131 (42%), Gaps = 10/131 (7%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
YG + PPCQ ++ G Q ++ R + L + P +ENV +
Sbjct: 73 YGPDIIIGGPPCQDFSTAGYQDET---RGRAILSVCYARIVIAVMPRYFVMENVATIRNT 129
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSP 121
++ K+I + Y + +L+ GVP +R R F + + LS L+ +L R+
Sbjct: 130 ESFRKVIVTFKEAGYGLTQKVLNAAYCGVPQTRKRMFVVGE---LSGEDDFLDEELERN- 185
Query: 122 SPLLGNDDMTV 132
L + MT+
Sbjct: 186 ---LADKPMTI 193
>gi|422850870|ref|ZP_16897540.1| modification methylase SinI [Streptococcus sanguinis SK150]
gi|325695618|gb|EGD37518.1| modification methylase SinI [Streptococcus sanguinis SK150]
Length = 471
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 16/107 (14%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS-----DTH 64
PPCQ ++ G +K DAR F++ L++I ++P + + +ENV G +T+ DT
Sbjct: 150 GPPCQAFSTAGNRKGFEDARGDVFIRYLDIIGE-IRPTYAV-IENVRGLQTTKAILEDTK 207
Query: 65 AKMI---------EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAK 102
I E L + Y + + FG P R R+ +AK
Sbjct: 208 GLAIKGGVLHFAKEKLESFGYSVSFELYNAANFGAPQKRERFVIIAK 254
>gi|440753325|ref|ZP_20932528.1| DNA-cytosine methyltransferase family protein [Microcystis
aeruginosa TAIHU98]
gi|440177818|gb|ELP57091.1| DNA-cytosine methyltransferase family protein [Microcystis
aeruginosa TAIHU98]
Length = 306
Score = 44.3 bits (103), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 3/103 (2%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
Y + SPPCQ ++ G ++ RA L E++ T P +ENV E S
Sbjct: 63 YNPEIIVGSPPCQDFSSAG-KRDEGLGRANLTLTFAEIV--TRVSPQWFVMENVDRIEKS 119
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
+ +I + Y E +++ GVP +R RYF + K K
Sbjct: 120 KILIQAKQIFKSHGYGLTEKVINSCYCGVPQTRKRYFLIGKMK 162
>gi|390993340|ref|ZP_10263514.1| DNA-cytosine methyltransferase family protein [Xanthomonas
axonopodis pv. punicae str. LMG 859]
gi|372551927|emb|CCF70489.1| DNA-cytosine methyltransferase family protein [Xanthomonas
axonopodis pv. punicae str. LMG 859]
Length = 404
Score = 44.3 bits (103), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 123/331 (37%), Gaps = 50/331 (15%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG---FETSDTHAK 66
PPCQ ++ ++ + D+R F + L + T P + +ENV G FE T
Sbjct: 81 GPPCQGFSINAPKRSTEDSRNHLFREYLRFV--TEFQPRAVLIENVPGMVSFEGGATLDA 138
Query: 67 MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR----------KPL-------SFR 109
++E L Y IL +GVP +R R L R +PL +F
Sbjct: 139 ILESLKQLGYDADVRILYAPHYGVPQTRWRTIILGSRCGVDPMALFPEPLRQAPVRVNFT 198
Query: 110 CQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKL--LESCDPVERFLEFSNSGDQVN 167
Q L+ P L +TV D+ L L + + E+ ++ + D N
Sbjct: 199 SQFAGKNLVNLPRSLELPSHVTV-------KDAIGDLPALHNGEIGEQVKDYRHPAD--N 249
Query: 168 TETGFLSTGTAAVDDFGAAE-ETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCC 226
+ G+ V AA + ++R I W + + P R
Sbjct: 250 PYQQLMRAGSTGVTCHEAARLSKINLERMTHIPPG-------GNWTDIPEALLPRGMRMA 302
Query: 227 CFTKSYYRYVK-GTGSLLATVQPK-NKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPH 284
+ RY + L +T+ K + + + R FT RE A + SFP + F
Sbjct: 303 RRSDHTKRYGRVNPDGLASTILTKCDPHWGAYFHYEQDRAFTVREAARIQSFPDTYVFCG 362
Query: 285 HLSLRQRYALLGNSLSIAVVAPLLQYLFAQA 315
S ++Y +GN+ V PLL +A
Sbjct: 363 --SRVEQYEQVGNA-----VPPLLGAAVGRA 386
>gi|417915588|ref|ZP_12559197.1| modification methylase HpaII [Streptococcus mitis bv. 2 str. SK95]
gi|342833427|gb|EGU67708.1| modification methylase HpaII [Streptococcus mitis bv. 2 str. SK95]
Length = 452
Score = 44.3 bits (103), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 51/127 (40%), Gaps = 17/127 (13%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G + D R F +I P LF+ENV G D IL
Sbjct: 76 PCQAFSIAGRRLGFEDTRGTLFFEIARAAKQI--QPRFLFLENVKGLLNHDKGRTFTTIL 133
Query: 72 ANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRK--------PLSFRCQLLNNQLLRS 120
D L + +L+ FGVP +R R F + + P Q N+++L++
Sbjct: 134 TTLDELGFDVEWQVLNSKDFGVPQNRERVFIIGHSRKKGTRLLFPFRREGQATNSEILKT 193
Query: 121 PSPLLGN 127
LGN
Sbjct: 194 ----LGN 196
>gi|162149538|ref|YP_001603999.1| cytosine-specifi methyltransferase DdeI [Gluconacetobacter
diazotrophicus PAl 5]
gi|161788115|emb|CAP57719.1| putative cytosine-specifi methyltransferase DdeI [Gluconacetobacter
diazotrophicus PAl 5]
Length = 435
Score = 44.3 bits (103), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 19/106 (17%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVK--PPHMLFVENVVGFET------- 60
PPCQ ++ GL++ D R+ K++++ H V+ P ++ +ENVVGF +
Sbjct: 89 GPPCQGFSMNGLRR-PDDPRS----KMVDVYLHYVEIVRPRLILLENVVGFRSMKHRTGG 143
Query: 61 --SDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
SD + +E Y T IL +GVP RPR+ +A K
Sbjct: 144 TYSDYTKRRLEAFG---YDTWIEILRAADWGVPQRRPRFVLIAAPK 186
>gi|294155594|ref|YP_003559978.1| cytosine-specific DNA modification methyltransferase [Mycoplasma
crocodyli MP145]
gi|291600134|gb|ADE19630.1| cytosine-specific DNA modification methyltransferase [Mycoplasma
crocodyli MP145]
Length = 388
Score = 44.3 bits (103), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 131/328 (39%), Gaps = 45/328 (13%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIP-HTVKPPHMLFVENVVGFETSDTHAKMIEI 70
PCQ +++ G QK D R F +I ++ H K + V N+V + +T +
Sbjct: 74 PCQAFSKAGKQKGLLDTRGTLFFEIQRILEFHKTKYIILENVRNLVSHDNGNTWNVIHNN 133
Query: 71 LANSDYLT--QEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGND 128
L Y T + +LSP +P R R F + K + ++ L+ + S +
Sbjct: 134 LNKLGYRTTSKPLLLSPHNLKIPQLRERVFIIGK-----YDLDNIDKDLIINNSTYSKKN 188
Query: 129 DMTV--ITKHDQPDDSW------DKLLESCDPV-----ERFLEFSNSGDQVNTETGF--- 172
D ++ I ++ +D + DKLLE+ + ++ L F D +N E F
Sbjct: 189 DNSIYDIIDKNKVEDKYYISKAEDKLLETWNKFYIGINKKILGFPIWFDYLN-EDSFSDD 247
Query: 173 ---LSTGTAAVDDFGAAEETVEVDRCVSIDHF---LVPLSLIERWGSAMDIVYPDSKRCC 226
+ E +D+ + F L+P W A D + +
Sbjct: 248 VPKWKLSIILKNKLLYKENKKFIDKWKKENSFLKDLIPTYKKFEW-QAGDSIKSIWEGII 306
Query: 227 CFTKSYYRYVKGTG---SLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFP 283
F S R VK T +L+A VQ GK + R T E + L SF D++F
Sbjct: 307 QFRPSGIR-VKKTDVFPALVAMVQIPIIGK-------YKRRLTVEECSKLQSFIPDYKFS 358
Query: 284 HHLSLRQRYALLGNSLSIAVVAPLLQYL 311
+ + Y LGNS+++ +V + + L
Sbjct: 359 GNDKI--SYKQLGNSVNVDIVKHVFELL 384
>gi|315604954|ref|ZP_07880010.1| modification methylase [Actinomyces sp. oral taxon 180 str. F0310]
gi|315313349|gb|EFU61410.1| modification methylase [Actinomyces sp. oral taxon 180 str. F0310]
Length = 322
Score = 43.9 bits (102), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 6/95 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF---ETSDTHAKMI 68
PC P++ G Q + D R F ++EL+ +V P + +ENV G + A +
Sbjct: 76 PCPPFSYAGKQLGADDERDL-FPAMIELV--SVVRPRAIMIENVRGLLDPKFDAYRASVE 132
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 103
E LA Y Q +L+ FGVP RPR + R
Sbjct: 133 EHLAQVGYSLQWKLLNASDFGVPQLRPRVIAVGFR 167
>gi|291087089|ref|ZP_06345376.2| modification methylase HpaII [Clostridium sp. M62/1]
gi|291076158|gb|EFE13522.1| DNA (cytosine-5-)-methyltransferase [Clostridium sp. M62/1]
Length = 490
Score = 43.9 bits (102), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 10/71 (14%)
Query: 251 KGKASSLKEQHLRYFTPREVANLHSFPG----------DFQFPHHLSLRQRYALLGNSLS 300
KGK S + E+++R TP E L F G F FP ++S +Q++ GNS+S
Sbjct: 310 KGKKSPINEKYIRTMTPAEWGRLQGFIGYAFLDENGNEGFSFPENMSNQQKFKQFGNSVS 369
Query: 301 IAVVAPLLQYL 311
I ++ + ++
Sbjct: 370 IPLIEEMALFI 380
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 22/110 (20%)
Query: 12 PCQPYTRQGLQKQSSD-ARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKM 67
PCQP+++ GL++ D + F I +I T+ P +F+ENV V + T +
Sbjct: 92 PCQPFSKIGLREGFKDITKGTIFFHIARIIEQTM--PKAIFLENVENLVSHDEGRTFRII 149
Query: 68 IEILANS----------------DYLTQEFILSPLQFGVPYSRPRYFCLA 101
I L N Y FI + FG+P +RPR + +A
Sbjct: 150 INTLENELNYHVIGVKRKTDGTLSYDKSSFIRNTRNFGLPQNRPRVYIVA 199
>gi|167751358|ref|ZP_02423485.1| hypothetical protein EUBSIR_02344 [Eubacterium siraeum DSM 15702]
gi|167655604|gb|EDR99733.1| DNA (cytosine-5-)-methyltransferase [Eubacterium siraeum DSM 15702]
Length = 316
Score = 43.9 bits (102), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEI- 70
PCQP++ G +K +D R F +I+ ++PP ++F ENV D I
Sbjct: 71 PCQPFSVCGQKKGFADERGNLFFEIMRF-ADVLQPP-IIFFENVANLTEHDNGRTFNVIH 128
Query: 71 --LANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
L + DY + I +G+P R R + +A
Sbjct: 129 NELVSRDYAIRYLIADACDYGIPQHRTRTYIVA 161
>gi|209544778|ref|YP_002277007.1| DNA-cytosine methyltransferase [Gluconacetobacter diazotrophicus
PAl 5]
gi|209532455|gb|ACI52392.1| DNA-cytosine methyltransferase [Gluconacetobacter diazotrophicus
PAl 5]
Length = 435
Score = 43.9 bits (102), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 19/106 (17%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVK--PPHMLFVENVVGFET------- 60
PPCQ ++ GL++ D R+ K++++ H V+ P ++ +ENVVGF +
Sbjct: 89 GPPCQGFSMNGLRR-PDDPRS----KMVDVYLHYVEIVRPRLILLENVVGFRSMKHRTGG 143
Query: 61 --SDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
SD + +E Y T IL +GVP RPR+ +A K
Sbjct: 144 TYSDYTKRRLEAFG---YDTWIEILRAADWGVPQRRPRFVLIAAPK 186
>gi|167854713|ref|ZP_02477492.1| cell division protein MukB [Haemophilus parasuis 29755]
gi|167854127|gb|EDS25362.1| cell division protein MukB [Haemophilus parasuis 29755]
Length = 361
Score = 43.9 bits (102), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 7/101 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G + D R F ++ E+I P F+ENV G + D + IL
Sbjct: 107 PCQAFSIAGKRGGFEDTRGTLFFEVAEIIRR--HQPKAFFLENVKGLSSHDKGRTLSTIL 164
Query: 72 ----ANSDYLTQE-FILSPLQFGVPYSRPRYFCLAKRKPLS 107
+ +Y + IL+ FGVP +R R F + R+ L+
Sbjct: 165 NVLREDLNYFVPDPKILNAKDFGVPQNRERIFIVGFRQDLA 205
>gi|325269501|ref|ZP_08136117.1| DNA (cytosine-5-)-methyltransferase [Prevotella multiformis DSM
16608]
gi|324988120|gb|EGC20087.1| DNA (cytosine-5-)-methyltransferase [Prevotella multiformis DSM
16608]
Length = 388
Score = 43.9 bits (102), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 121/310 (39%), Gaps = 44/310 (14%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIE 69
PCQ ++ G Q+ D R F + ++ P + ENV G D + E
Sbjct: 105 GAPCQAFSIVGDQRGFDDTRGTLFREFARVVKEC--QPKVFIFENVQGLFKHD-QGRTWE 161
Query: 70 ILANS--DYLTQEF---ILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPL 124
++ N+ DY + +L+ +G+P +R R +C+ +K F+ +P PL
Sbjct: 162 VIYNTFKDYCGYDVHYQLLNARDYGIPQTRERLYCVGFKKKTKFK--------YPAPIPL 213
Query: 125 LGN--DDMTVITKHDQ-PDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVD 181
D + T + D K+L S + + + ++ ++ N F+ D
Sbjct: 214 RYKMYDFLEDYTNSEYFEKDKGVKVLTSNEEHRQAIIGGSASERFND---FIFPVREIDD 270
Query: 182 DFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGS 241
+ +++ + C F P+ + +DI P +S ++ +
Sbjct: 271 KYYLSKKVAKYVLCPGTKTFKTPIK------TDLDIARP-------LLQSMHKMHRAGVD 317
Query: 242 LLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSI 301
T + K+KG LR TPRE L F DF+ +S Y GNS+ +
Sbjct: 318 NYVTYK-KDKGVNG------LRKLTPRECLRLMGFKDDFKIA--VSNTSAYMEAGNSIVV 368
Query: 302 AVVAPLLQYL 311
V+ LL+ +
Sbjct: 369 DVLIALLKQM 378
>gi|289423024|ref|ZP_06424844.1| putative site-specific DNA-methyltransferase [Peptostreptococcus
anaerobius 653-L]
gi|289156598|gb|EFD05243.1| putative site-specific DNA-methyltransferase [Peptostreptococcus
anaerobius 653-L]
Length = 706
Score = 43.9 bits (102), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 47/118 (39%), Gaps = 6/118 (5%)
Query: 12 PCQPYTRQGLQKQSSD-ARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKM 67
PCQ ++ G QK D R F I +I K P +ENV E D T M
Sbjct: 74 PCQAFSICGKQKGFYDETRGTLFFDICRIIEE--KKPKAFVLENVSNLEKHDSGRTLTVM 131
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLL 125
+ +L+ Y +L+ FGVP +R R + +F L + + P L
Sbjct: 132 LSVLSELGYTVVYKVLNARNFGVPQNRERIIIVGNLNGRAFDFTKLKTNTIETMKPFL 189
>gi|365120060|ref|ZP_09337880.1| DNA (cytosine-5-)-methyltransferase [Tannerella sp. 6_1_58FAA_CT1]
gi|363647912|gb|EHL87106.1| DNA (cytosine-5-)-methyltransferase [Tannerella sp. 6_1_58FAA_CT1]
Length = 334
Score = 43.9 bits (102), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 6/99 (6%)
Query: 10 SPPCQPYTRQG-LQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTH---A 65
PPCQ ++ QK+ D R F + + + P ++ +ENV G T D
Sbjct: 78 GPPCQGFSSANRWQKEMEDPRNKLFFEYIRFVQKI--HPKVIMIENVRGLLTRDNGYAIE 135
Query: 66 KMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
++ EIL +Y +L ++GVP +R R + RK
Sbjct: 136 RIKEILGAEEYNITYQVLDASEYGVPQNRKRAIIVGVRK 174
>gi|56461628|ref|YP_156909.1| DNA cytosine methylase [Idiomarina loihiensis L2TR]
gi|56180638|gb|AAV83360.1| DNA cytosine methylase [Idiomarina loihiensis L2TR]
Length = 419
Score = 43.9 bits (102), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 12 PCQPYT----RQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF---ETSDTH 64
PCQP++ R+G + + ++I E K P +LF+ENV G + +T
Sbjct: 167 PCQPFSHIGRREGFKHPTQGTMFHEIVRIAE-----KKRPRVLFLENVPGIVNHDNGNTL 221
Query: 65 AKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
+++ L Y IL+ FGVP +R R++ +A
Sbjct: 222 KVILDTLTELGYECNHTILNASDFGVPQNRKRFYLVA 258
>gi|357541808|gb|AET84570.1| DNA methylase [Ostreococcus lucimarinus virus OlV4]
Length = 418
Score = 43.9 bits (102), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHA---KMI 68
PCQP++ G +K SD R KI+EL + P + +ENV T D +I
Sbjct: 79 PCQPFSTAGQRKGFSDDRGGMIFKIMELCKY--HKPKYILLENVYNLLTIDGGKCIQTII 136
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
++ +Y L+ FG P SR R + +
Sbjct: 137 QLFEELNYNVYYEKLNSKDFGCPQSRERVYIIC 169
>gi|2894386|emb|CAA74996.1| Bpu10I (5m)cytosine-specific DNA modification methyltransferase
(C1) [Bacillus pumilus]
Length = 398
Score = 43.9 bits (102), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 15/114 (13%)
Query: 3 GAHAWLLSPPCQPYTRQGLQKQS-SDARAF---SFLKILELIPHTVKPPHMLFVENV--- 55
G A + PPCQ ++ +++ D R + FL++++L+ P ++F+ENV
Sbjct: 72 GIDAVIGGPPCQGFSISASNRRNPDDPRNYLYRQFLRVIKLVK-----PRIVFMENVKEI 126
Query: 56 VGFETSDTHAKMIEI---LANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 106
V F + + EI L Y + FI++ FG+P R R+F +A P+
Sbjct: 127 VKFVLPNGKLLLDEIIFCLEELGYSIKPFIINAADFGIPQERIRFFMVASLGPV 180
>gi|388543421|ref|ZP_10146712.1| cytosine-specific methyltransferase [Pseudomonas sp. M47T1]
gi|388278733|gb|EIK98304.1| cytosine-specific methyltransferase [Pseudomonas sp. M47T1]
Length = 360
Score = 43.9 bits (102), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQP+++ ++S+D + L + KP ++ +ENV T + + K + L
Sbjct: 81 PCQPFSKYSSTRKSNDDDKWKLLNEFRRLISETKP-ELVTMENVPQLRTHEIYLKFVSFL 139
Query: 72 ANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
S Y ++S Q+G+P R R LA
Sbjct: 140 KVSGYHVDFKVVSCAQYGLPQMRKRLVLLA 169
>gi|268611036|ref|ZP_06144763.1| prophage LambdaSa2, type II DNA modification methyltransferase,
putative [Ruminococcus flavefaciens FD-1]
Length = 425
Score = 43.9 bits (102), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQ ++ G ++ DAR F +I + VK P L +ENV G + D T A ++
Sbjct: 74 PCQSFSIAGKRRGFEDARGTMFFEIARI--AAVKRPKYLLLENVPGLLSHDEGRTFAAIL 131
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
L + Y L+ FGV +R R F +
Sbjct: 132 TALDDLGYDVAWQCLNSANFGVAQARKRVFIIG 164
>gi|294667855|ref|ZP_06733064.1| DNA cytosine-5 -methyltransferase PliMCI [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
gi|292602358|gb|EFF45800.1| DNA cytosine-5 -methyltransferase PliMCI [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
Length = 410
Score = 43.9 bits (102), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 122/329 (37%), Gaps = 46/329 (13%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG---FETSDTHAK 66
PPCQ ++ ++ + D+R F + L + T P + +ENV G FE T
Sbjct: 87 GPPCQGFSINAPKRSTEDSRNHLFREYLRFV--TEFQPQAVLIENVPGMVSFEGGATLDA 144
Query: 67 MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR----------KPL-------SFR 109
++ L Y IL +GVP +R R L R +PL +F
Sbjct: 145 ILAALKQLGYDADVRILYAPHYGVPQTRWRTIILGSRCGVDPTALFPEPLRQAPVRVNFT 204
Query: 110 CQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTE 169
Q L+ P L +TV K D + E +PV+ ++ + D N
Sbjct: 205 SQFAGKNLVNLPRSLELPSHVTV--KDAIGDLPKLRNGEMGEPVK---DYRHPAD--NPY 257
Query: 170 TGFLSTGTAAVDDFGAAE-ETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCF 228
+ G+ V AA + ++R I W D + P R
Sbjct: 258 QQLMRVGSTGVTCHEAARLSKINLERMTHIPPG-------GNWTDIPDALLPSGMRLARR 310
Query: 229 TKSYYRYVK-GTGSLLATVQPK-NKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHL 286
+ RY + L +T+ K + + + R FT RE A + SFP + F
Sbjct: 311 SDHTKRYGRVNPDGLASTILTKCDPHWGAYFHYEQDRAFTVREAARIQSFPDSYVFCG-- 368
Query: 287 SLRQRYALLGNSLSIAVVAPLLQYLFAQA 315
S ++Y +GN+ V PLL +A
Sbjct: 369 SRVEQYEQVGNA-----VPPLLGAAVGRA 392
>gi|430376998|ref|ZP_19431131.1| DNA-cytosine methyltransferase [Moraxella macacae 0408225]
gi|429540135|gb|ELA08164.1| DNA-cytosine methyltransferase [Moraxella macacae 0408225]
Length = 335
Score = 43.9 bits (102), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 51/121 (42%), Gaps = 18/121 (14%)
Query: 10 SPPCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAK 66
PPCQ ++ G + DAR F +++IL T K P ENV G
Sbjct: 73 GPPCQSWSEAGALRGIDDARGQLFFDYIRIL-----TAKQPKFFVAENVSGMLAKRHSFA 127
Query: 67 MIEILA---NSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSP 123
+ ILA + Y +L FGV +R R F + RK L +N+ L P+P
Sbjct: 128 VQNILAQFEQAGYQVFVKMLDAYDFGVAQNRKRVFYIGFRKDLG-----VNDFLF--PTP 180
Query: 124 L 124
L
Sbjct: 181 L 181
>gi|407647539|ref|YP_006811298.1| putative modification methylase [Nocardia brasiliensis ATCC 700358]
gi|407310423|gb|AFU04324.1| putative modification methylase [Nocardia brasiliensis ATCC 700358]
Length = 422
Score = 43.9 bits (102), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 7/99 (7%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF---ETSDTHAKMI 68
PC P++ G Q D R F ++LEL+ + P + +ENV G + SD +
Sbjct: 110 PCPPFSHAGKQLGKHDERDL-FPRMLELV--EILQPRAVMIENVRGLMDPKFSDYRKLIQ 166
Query: 69 EILANSDYLTQEF-ILSPLQFGVPYSRPRYFCLAKRKPL 106
+ L DY+ ++ +L FGVP RPR +A R+ +
Sbjct: 167 DELEQLDYVVCKWGVLEAADFGVPQLRPRAILVAFRREV 205
>gi|307710826|ref|ZP_07647254.1| DNA-cytosine methyltransferase family protein [Streptococcus mitis
SK321]
gi|307617432|gb|EFN96604.1| DNA-cytosine methyltransferase family protein [Streptococcus mitis
SK321]
Length = 406
Score = 43.9 bits (102), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQ ++ G +K D R F ++L +I P +F+ENV VG + +T +
Sbjct: 86 PCQAFSIAGYRKGFDDDRGDLFFELLRMIEGC--KPRAIFIENVKNMVGHDHGNTFKVIR 143
Query: 69 EILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 101
E L ++Y + +L+ +G +P +R R + +
Sbjct: 144 EALTENNYFIKWKVLNGKDYGNIPQNRERIYIVG 177
>gi|336420819|ref|ZP_08600980.1| hypothetical protein HMPREF0993_00357 [Lachnospiraceae bacterium
5_1_57FAA]
gi|336003838|gb|EGN33914.1| hypothetical protein HMPREF0993_00357 [Lachnospiraceae bacterium
5_1_57FAA]
Length = 399
Score = 43.9 bits (102), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQ ++ G ++ +DAR F +I L+ + P +ENV G + D T ++
Sbjct: 48 PCQAFSIAGKREGFADARGTLFFEIARLVAD--RRPAYFILENVPGLLSHDKGRTFHTIL 105
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
L+ Y + +L+ FGVP SR R + +
Sbjct: 106 STLSELGYGVEWKVLNSKDFGVPQSRKRVYIVG 138
>gi|219870523|ref|YP_002474898.1| Type II modification methyltransferase HpaII/DNA
(cytosine-5-)-methyltransferase [Haemophilus parasuis
SH0165]
gi|219690727|gb|ACL31950.1| Type II modification methyltransferase HpaII/DNA
(cytosine-5-)-methyltransferase [Haemophilus parasuis
SH0165]
Length = 350
Score = 43.9 bits (102), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 7/101 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G + D R F ++ E+I P F+ENV G + D + IL
Sbjct: 96 PCQAFSIAGKRGGFEDTRGTLFFEVAEIIRR--HQPKAFFLENVKGLSSHDKGRTLSTIL 153
Query: 72 ----ANSDYLTQE-FILSPLQFGVPYSRPRYFCLAKRKPLS 107
+ +Y + IL+ FGVP +R R F + R+ L+
Sbjct: 154 NVLREDLNYFVPDPKILNAKDFGVPQNRERIFIVGFRQDLA 194
>gi|420435793|ref|ZP_14934792.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-27]
gi|420492530|ref|ZP_14991104.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-15]
gi|420506345|ref|ZP_15004860.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-74]
gi|420526553|ref|ZP_15024954.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-15b]
gi|393051652|gb|EJB52603.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-27]
gi|393106969|gb|EJC07512.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-15]
gi|393115850|gb|EJC16360.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-74]
gi|393131858|gb|EJC32281.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-15b]
Length = 351
Score = 43.9 bits (102), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 9/101 (8%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L++L+L+ P + ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
++ Y+ + IL+ L +G P R R + K
Sbjct: 126 FKQICNAFKERGYILEHAILNALDYGAPQIRERVILVGALK 166
>gi|390940919|ref|YP_006404656.1| DNA-methyltransferase Dcm [Sulfurospirillum barnesii SES-3]
gi|390194026|gb|AFL69081.1| DNA-methyltransferase Dcm [Sulfurospirillum barnesii SES-3]
Length = 375
Score = 43.9 bits (102), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 9/69 (13%)
Query: 253 KASSLKEQHLRYFTPREVANLHSFPG---------DFQFPHHLSLRQRYALLGNSLSIAV 303
K S + Q +R TP E A L F F FP +S Q+Y LGNS+SI V
Sbjct: 297 KQSPINNQGIRVMTPTEWARLQGFKDYAFIKNGMDTFSFPKEVSETQQYKQLGNSVSIPV 356
Query: 304 VAPLLQYLF 312
+ L +Y++
Sbjct: 357 IEELARYIY 365
>gi|269986305|gb|EEZ92611.1| DNA-cytosine methyltransferase [Candidatus Parvarchaeum acidiphilum
ARMAN-4]
Length = 349
Score = 43.9 bits (102), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 45/109 (41%), Gaps = 7/109 (6%)
Query: 4 AHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDT 63
A + PPCQ ++ G + +D R F + + +I K P ENV G +S T
Sbjct: 64 ADGIIGGPPCQSWSLAGAMRGINDERGQLFYEYIRVIRD--KQPKFFVAENVPGMLSS-T 120
Query: 64 HA----KMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 108
H K+I + Y I +GVP R R + RK + F
Sbjct: 121 HKSEFNKIINQMERLGYRVSYNIYDARNYGVPQERKRVIIVGYRKDIGF 169
>gi|26554428|ref|NP_758362.1| cytosine-specific DNA methylase [Mycoplasma penetrans HF-2]
gi|26454438|dbj|BAC44766.1| cytosine-specific DNA methylase [Mycoplasma penetrans HF-2]
Length = 426
Score = 43.9 bits (102), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 260 QHLRYFTPREVANLHSFPGDFQFPHHLSLRQR----YALLGNSLSIAVVAPLLQYL 311
+ R+ TPRE ANL SFP DF+ LS Y GNS+++ + + + +YL
Sbjct: 367 KKWRHLTPRETANLQSFPEDFKIYSDLSKNNNDFYSYKQFGNSINVKIASYIQEYL 422
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 12 PCQPYTRQGLQKQSSDA-RAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKM 67
PCQ ++ G +K D R F I +++ + K P + +ENV V + T +
Sbjct: 82 PCQTFSNAGKKKGFLDEIRGTLFFDIAKILKN--KKPKYILLENVKHLVNHDNGKTWEII 139
Query: 68 IEILANSDYLT--QEFILSPLQFGVPYSRPRYFC 99
I+ L YL + ILSP +FG+P R R F
Sbjct: 140 IKTLKEIGYLIPKEPLILSPHEFGIPQERYRVFI 173
>gi|422015406|ref|ZP_16362004.1| DNA-cytosine methyltransferase [Providencia burhodogranariea DSM
19968]
gi|414099047|gb|EKT60691.1| DNA-cytosine methyltransferase [Providencia burhodogranariea DSM
19968]
Length = 535
Score = 43.9 bits (102), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 29/169 (17%)
Query: 11 PPCQPYTRQGLQKQSSDARA--FSFLKILELIPHTVKPPHMLFVENVVGFETS--DTHAK 66
PPCQ ++ GL+++ SD + F K +E + P + +ENV G + D++ K
Sbjct: 148 PPCQGFSMAGLREKDSDKNMLPWEFAKFVEYV-----QPKIAVLENVTGILRAFKDSNGK 202
Query: 67 -------MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL------SFRCQLL 113
+ + A Y+ ++ GVP +RPR+ +A R + SF + +
Sbjct: 203 PFYAWFEVAKAFAEKKYIPLCLHVNARFAGVPQNRPRFIMIAIRSDIFEDIKSSFGSESV 262
Query: 114 NNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNS 162
+ QLL S + PD + LE DPV+ F +S
Sbjct: 263 DYQLLSSSEKFYK-------LVQNNPDKAIMGTLECYDPVKNISLFEDS 304
>gi|391230864|ref|ZP_10267070.1| DNA-methyltransferase Dcm [Opitutaceae bacterium TAV1]
gi|391220525|gb|EIP98945.1| DNA-methyltransferase Dcm [Opitutaceae bacterium TAV1]
Length = 412
Score = 43.9 bits (102), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 120/327 (36%), Gaps = 46/327 (14%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIE 69
PPCQ ++ + A F + L L+ P L +ENV G + + E
Sbjct: 91 GPPCQAFSYNSHLRTHEGQVAGLFREYLRLVGELN--PRYLVMENVPGILSVGDGGVVGE 148
Query: 70 I---LANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLG 126
I L Y T I+ +GVP R R +A R L + PSP
Sbjct: 149 IASRLGELGYETDGRIVYAEDYGVPQQRRRMIFVASRIGLPANIFPVGTH---GPSP--- 202
Query: 127 NDDMTVITKHDQPDDSWDKLLESCDPVERFLE-FSNSGD-----QVNTETGFLSTGTAAV 180
V +H WD CDP R + +S GD E+ L T A
Sbjct: 203 ---KPVSNEHVH---RWDP--NPCDPPSRLVRVWSAIGDLPVTVSTTDESKALGYRTGAW 254
Query: 181 DDFG--AAEETVEV--DRCVSID-HFLVPLSLIERWGSAMDI---VYPDS---KRCCCFT 229
DF A E ++ V C + + L +S + + GS DI + P R T
Sbjct: 255 CDFQRYAREGSLGVLNHHCAGLGPNSLARISHVPQGGSWRDIPRHLLPAGMQRARTSDHT 314
Query: 230 KSYYRYVKGTGSLLATVQPK-NKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSL 288
K Y R L TV K + + R T RE A L SFP F F L
Sbjct: 315 KRYGRLAPK--DLACTVLTKCDPHWGCYIHPNEDRVLTVREAARLQSFPDRFNF-IGPQL 371
Query: 289 RQRYALLGNSLSIAVVAPLLQYLFAQA 315
Q Y L+GNS V PLL AQ+
Sbjct: 372 AQ-YRLVGNS-----VPPLLARSIAQS 392
>gi|16077673|ref|NP_388487.1| DNA-methyltransferase [Bacillus subtilis subsp. subtilis str. 168]
gi|221308442|ref|ZP_03590289.1| hypothetical protein Bsubs1_03403 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221312764|ref|ZP_03594569.1| hypothetical protein BsubsN3_03379 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221317687|ref|ZP_03598981.1| hypothetical protein BsubsJ_03338 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221321963|ref|ZP_03603257.1| hypothetical protein BsubsS_03409 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|402774831|ref|YP_006628775.1| DNA-methyltransferase [Bacillus subtilis QB928]
gi|418034313|ref|ZP_12672788.1| hypothetical protein BSSC8_37320 [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|452912689|ref|ZP_21961317.1| DNA (cytosine-5-)-methyltransferase family protein [Bacillus
subtilis MB73/2]
gi|81669163|sp|O34939.1|YDIO_BACSU RecName: Full=Probable BsuMI modification methylase subunit YdiO;
Short=M1.BsuMI; AltName: Full=Cytosine-specific
methyltransferase M1.BsuMI
gi|2521997|dbj|BAA22750.1| ydiO [Bacillus subtilis]
gi|2632919|emb|CAB12425.1| DNA-methyltransferase (cytosine-specific) [Bacillus subtilis subsp.
subtilis str. 168]
gi|351468958|gb|EHA29159.1| hypothetical protein BSSC8_37320 [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|402480016|gb|AFQ56525.1| DNA-methyltransferase (cytosine-specific) [Bacillus subtilis QB928]
gi|452117717|gb|EME08111.1| DNA (cytosine-5-)-methyltransferase family protein [Bacillus
subtilis MB73/2]
Length = 427
Score = 43.9 bits (102), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 4/107 (3%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF--ETSDTHA 65
L PPCQ ++ + D R +++ +I + P + VENV G + S +
Sbjct: 171 LAGPPCQGHSDLNNHTRRKDPRNALLMRVSRVI--ELFQPSSVLVENVPGIIHDKSGSFK 228
Query: 66 KMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQL 112
+ L Y E +L+ + GV +R RYF A + P+S Q+
Sbjct: 229 EFKNHLKTQGYYFDEIVLNAEKLGVSQARRRYFIFASKTPVSSLNQI 275
>gi|210614083|ref|ZP_03290039.1| hypothetical protein CLONEX_02252 [Clostridium nexile DSM 1787]
gi|210150861|gb|EEA81869.1| hypothetical protein CLONEX_02252 [Clostridium nexile DSM 1787]
Length = 244
Score = 43.9 bits (102), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G ++ DAR F +I L+ +PP++L +ENV G + + A IL
Sbjct: 68 PCQAFSVAGKRQGFEDARGTLFFEIARLV-KARRPPYLL-LENVPGLLSHNKGATFNTIL 125
Query: 72 AN---SDYLTQEFILSPLQFGVPYSRPRYFCLA 101
Y + +L+ FGVP SR R + +
Sbjct: 126 YTLYELGYHVEWQVLNSKDFGVPQSRKRVYLIG 158
>gi|149919032|ref|ZP_01907517.1| DNA-cytosine methyltransferase family protein [Plesiocystis
pacifica SIR-1]
gi|149820185|gb|EDM79604.1| DNA-cytosine methyltransferase family protein [Plesiocystis
pacifica SIR-1]
Length = 401
Score = 43.9 bits (102), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 56/142 (39%), Gaps = 26/142 (18%)
Query: 10 SPPCQPYTRQGLQKQS-----SDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTH 64
PPCQP+++ L D RA + + T+ P L +ENV G +
Sbjct: 83 GPPCQPWSKASLWTDDGTLGYGDPRAATIDAYFSFVAATL--PQALLLENVPGLASPKGG 140
Query: 65 A------KMIEILANSD---YLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNN 115
A ++ EI + D Y F+++ +GVP R R F LA +
Sbjct: 141 ALKLIEHRLAEINSAHDSVNYRPHAFLVNAADYGVPQFRQRLFVLAS----------IEG 190
Query: 116 QLLRSPSPLLGNDDMTVITKHD 137
+ PSP G+ + IT D
Sbjct: 191 KDFSMPSPTHGDGALEYITAWD 212
>gi|420413317|ref|ZP_14912441.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4099]
gi|420418302|ref|ZP_14917394.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4076]
gi|393029304|gb|EJB30385.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4099]
gi|393033128|gb|EJB34191.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4076]
Length = 309
Score = 43.9 bits (102), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQ ++ GLQK +D R +++ +I K P +L +ENV V +T ++
Sbjct: 70 PCQAFSIAGLQKGLNDERGAIVVEMFRII--QAKKPQVLLLENVKNLVSHNKGETLKFIL 127
Query: 69 EILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 101
E L N Y IL+ ++ +P +R R + +
Sbjct: 128 ETLKNLGYFIHYKILNTYEYSTIPQNRERIYIIG 161
>gi|417847988|ref|ZP_12493944.1| DNA (cytosine-5-)-methyltransferase [Streptococcus mitis SK1073]
gi|339455586|gb|EGP68188.1| DNA (cytosine-5-)-methyltransferase [Streptococcus mitis SK1073]
Length = 406
Score = 43.9 bits (102), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQ ++ G +K D R F ++L +I P +F+ENV VG + +T +
Sbjct: 86 PCQAFSIAGYRKGFDDDRGDLFFELLRMIEGC--KPRAIFIENVKNMVGHDHGNTFKVIR 143
Query: 69 EILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 101
E L ++Y + +L+ +G +P +R R + +
Sbjct: 144 EALTENNYFIKWKVLNGKDYGNIPQNRERIYIVG 177
>gi|322376119|ref|ZP_08050628.1| DNA modification methylase [Streptococcus sp. C300]
gi|321278887|gb|EFX55931.1| DNA modification methylase [Streptococcus sp. C300]
Length = 406
Score = 43.9 bits (102), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQ ++ G +K D R F ++L +I P +F+ENV VG + +T +
Sbjct: 86 PCQAFSIAGYRKGFDDDRGDLFFELLRMIEGC--KPRAIFIENVKNMVGHDHGNTFKVIR 143
Query: 69 EILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 101
E L ++Y + +L+ +G +P +R R + +
Sbjct: 144 EALTENNYFIKWKVLNGKDYGNIPQNRERIYIVG 177
>gi|440723688|ref|ZP_20904044.1| DNA (cytosine-5-)-methyltransferase [Pseudomonas syringae
BRIP34876]
gi|440726663|ref|ZP_20906914.1| DNA (cytosine-5-)-methyltransferase [Pseudomonas syringae
BRIP34881]
gi|440359028|gb|ELP96354.1| DNA (cytosine-5-)-methyltransferase [Pseudomonas syringae
BRIP34876]
gi|440365716|gb|ELQ02806.1| DNA (cytosine-5-)-methyltransferase [Pseudomonas syringae
BRIP34881]
Length = 399
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 14/119 (11%)
Query: 6 AWLLSPPCQPYTRQGLQKQSSDARAFS---------FLKILELIPHTVKPPHMLFVENVV 56
AW S PCQ ++ G + +A S FL+I+ + +PP +L +ENV
Sbjct: 73 AWA-SFPCQDLSQAGSKAGIGEADDISVTRSGAVWPFLRIIRGLAEEGRPPALLALENVT 131
Query: 57 GFETSDTHAKMIEILANSDYLTQEF--ILSPLQFGVPYSRPRYFCLAKRK--PLSFRCQ 111
G +++ + + + + + F I++ VP SRPR F +A R+ P+ R Q
Sbjct: 132 GLLNANSGSDFRSLCSALNEIGYRFGAIVADASHFVPQSRPRVFIVAVRREIPIPARLQ 190
>gi|414077047|ref|YP_006996365.1| DNA-cytosine methyltransferase [Anabaena sp. 90]
gi|413970463|gb|AFW94552.1| DNA-cytosine methyltransferase [Anabaena sp. 90]
Length = 328
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 5/93 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVV---GFETSDTHAKMI 68
PCQP++ G K D R F I +I + K P +ENV G + T +I
Sbjct: 76 PCQPFSICGELKGFEDTRGTLFFDIARIIKN--KQPSAFILENVKQLKGHQQGQTLQIII 133
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
L + Y T IL+ + FG+P R R +
Sbjct: 134 NTLKDLGYYTDYQILNAVNFGLPQKRERILIVG 166
>gi|322385307|ref|ZP_08058952.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus
cristatus ATCC 51100]
gi|321270566|gb|EFX53481.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus
cristatus ATCC 51100]
Length = 480
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 50/127 (39%), Gaps = 17/127 (13%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G + D R F +I P LF+ENV G D IL
Sbjct: 104 PCQAFSIAGRRLGFEDTRGTLFFEIARAAKQI--QPRFLFLENVKGLLNHDKGRTFTTIL 161
Query: 72 ANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRK--------PLSFRCQLLNNQLLRS 120
D L + +L+ FGVP +R R F + + P Q N++ L+
Sbjct: 162 TTLDELGFDVEWQVLNSKNFGVPQNRERVFIIGHSRKRGTRLLFPFRREGQATNSETLK- 220
Query: 121 PSPLLGN 127
+LGN
Sbjct: 221 ---ILGN 224
>gi|254410261|ref|ZP_05024041.1| C-5 cytosine-specific DNA methylase superfamily [Coleofasciculus
chthonoplastes PCC 7420]
gi|196183297|gb|EDX78281.1| C-5 cytosine-specific DNA methylase superfamily [Coleofasciculus
chthonoplastes PCC 7420]
Length = 384
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 6/101 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQP++ G +K D R F +I E+I K P ++ +ENV D + IL
Sbjct: 72 PCQPFSICGKRKGFQDTRGTLFFRICEII--AAKKPPVILLENVKHLMHQDKGRTLKVIL 129
Query: 72 ANSD---YLTQEFILSPLQFGVPYSRPRYFCLA-KRKPLSF 108
+ + Y +L+ FGVP +R R +A K K +F
Sbjct: 130 YSLEDLGYNVNYSLLNSKDFGVPQNRERIIIVATKNKQFNF 170
>gi|418519200|ref|ZP_13085307.1| DNA (cytosine-5)-methyltransferase PliMCI [Xanthomonas axonopodis
pv. malvacearum str. GSPB1386]
gi|410700593|gb|EKQ59141.1| DNA (cytosine-5)-methyltransferase PliMCI [Xanthomonas axonopodis
pv. malvacearum str. GSPB1386]
Length = 400
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 123/331 (37%), Gaps = 50/331 (15%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG---FETSDTHAK 66
PPCQ ++ ++ + D+R F + L + T P + +ENV G FE T
Sbjct: 77 GPPCQGFSINAPKRSTEDSRNHLFREYLRFV--TEFQPRAVLIENVPGMVSFEGGATLDA 134
Query: 67 MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR----------KPL-------SFR 109
++E L Y IL +GVP +R R L R +PL +F
Sbjct: 135 ILESLKQLGYDADVRILYAPHYGVPQTRWRTIILGSRCGVDPMALFPEPLRQAPVRVNFT 194
Query: 110 CQLLNNQLLRSPSPLLGNDDMTVITKHDQPDDSWDKL--LESCDPVERFLEFSNSGDQVN 167
Q L+ P L +TV D+ L L + + E+ ++ + D N
Sbjct: 195 SQFAGKNLVNLPRSLELPSHVTV-------KDAIGDLPALHNGEIGEQVKDYRHPAD--N 245
Query: 168 TETGFLSTGTAAVDDFGAAE-ETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCC 226
+ G+ V AA + ++R I W + + P R
Sbjct: 246 PYQQLMRAGSTGVTCHEAARLSKINLERMTHIPPG-------GNWTDIPEALLPRGMRMA 298
Query: 227 CFTKSYYRYVK-GTGSLLATVQPK-NKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPH 284
+ RY + L +T+ K + + + R FT RE A + SFP + F
Sbjct: 299 RRSDHTKRYGRVNPDGLASTILTKCDPHWGAYFHYEQDRAFTVREAARIQSFPDTYVFCG 358
Query: 285 HLSLRQRYALLGNSLSIAVVAPLLQYLFAQA 315
S ++Y +GN+ V PLL +A
Sbjct: 359 --SRVEQYEQVGNA-----VPPLLGAAVGRA 382
>gi|335030551|ref|ZP_08524039.1| DNA (cytosine-5-)-methyltransferase [Streptococcus infantis SK1076]
gi|334265842|gb|EGL84333.1| DNA (cytosine-5-)-methyltransferase [Streptococcus infantis SK1076]
Length = 406
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQ ++ G +K D R F ++L +I P +F+ENV VG + +T +
Sbjct: 86 PCQAFSIAGYRKGFDDDRGDLFFELLRMIEGC--KPRAIFIENVKNMVGHDHGNTFKVIR 143
Query: 69 EILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 101
E L ++Y + +L+ +G +P +R R + +
Sbjct: 144 EALTENNYFIKWKVLNGKDYGNIPQNRERIYIVG 177
>gi|238751088|ref|ZP_04612584.1| Modification methylase FnuDI [Yersinia rohdei ATCC 43380]
gi|238710778|gb|EEQ03000.1| Modification methylase FnuDI [Yersinia rohdei ATCC 43380]
Length = 362
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G +K SDAR+ + + L ++ + V+P + + ENV G + + + + L
Sbjct: 80 PCQSFSMAGNRKPDSDARSNLYKQFLRVL-NIVRPKYFV-AENVSGLQQLGAGSFLEQQL 137
Query: 72 A---NSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 106
+ Y +++ ++GVP SR R F + RK L
Sbjct: 138 TAYQQAGYQVSYHLVNAKEYGVPQSRKRLFIIGVRKDL 175
>gi|417939243|ref|ZP_12582536.1| DNA (cytosine-5-)-methyltransferase [Streptococcus infantis SK970]
gi|343390688|gb|EGV03268.1| DNA (cytosine-5-)-methyltransferase [Streptococcus infantis SK970]
Length = 406
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQ ++ G +K D R F ++L +I P +F+ENV VG + +T +
Sbjct: 86 PCQAFSIAGYRKGFDDDRGDLFFELLRMIEGC--KPRAIFIENVKNMVGHDHGNTFKVIR 143
Query: 69 EILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 101
E L ++Y + +L+ +G +P +R R + +
Sbjct: 144 EALTENNYFIKWKVLNGKDYGNIPQNRERIYIVG 177
>gi|428779548|ref|YP_007171334.1| DNA-methyltransferase Dcm [Dactylococcopsis salina PCC 8305]
gi|428693827|gb|AFZ49977.1| DNA-methyltransferase Dcm [Dactylococcopsis salina PCC 8305]
Length = 392
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM-- 67
PPCQ ++ G Q D R F F + L +I ++KP +++ +ENV G + +
Sbjct: 77 GPPCQGFSTIG-QNNHQDQRNFLFWEFLRII-KSLKPDYVI-MENVTGLLSRKNEVTLNV 133
Query: 68 -IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 103
+E Y +LS +GVP R R LA R
Sbjct: 134 ILESFTQIGYKVDIKVLSAHHYGVPEKRRRTILLANR 170
>gi|417936804|ref|ZP_12580110.1| DNA (cytosine-5-)-methyltransferase [Streptococcus infantis X]
gi|343399246|gb|EGV11768.1| DNA (cytosine-5-)-methyltransferase [Streptococcus infantis X]
Length = 406
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQ ++ G +K D R F ++L +I P +F+ENV VG + +T +
Sbjct: 86 PCQAFSIAGYRKGFDDDRGDLFFELLRMIEGC--KPRAIFIENVKNMVGHDHGNTFKVIR 143
Query: 69 EILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 101
E L ++Y + +L+ +G +P +R R + +
Sbjct: 144 EALTENNYFIKWKVLNGKDYGNIPQNRERIYIVG 177
>gi|269122950|ref|YP_003305527.1| DNA-cytosine methyltransferase [Streptobacillus moniliformis DSM
12112]
gi|268314276|gb|ACZ00650.1| DNA-cytosine methyltransferase [Streptobacillus moniliformis DSM
12112]
Length = 328
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 5/103 (4%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFET---SDTHAK 66
PPCQ ++ G K D R F + + ++ K P ENV G + +D
Sbjct: 68 GPPCQSWSEAGSLKGIEDPRGQLFYQYIRILKE--KQPKFFLAENVKGMMSKRHNDAVKN 125
Query: 67 MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 109
++ + Y +L+ +GVP R R F + RK L+ +
Sbjct: 126 IVSQFEEAGYDVYIHLLNASDYGVPQDRKRVFYIGFRKDLNIK 168
>gi|427387312|ref|ZP_18883368.1| DNA (cytosine-5-)-methyltransferase [Bacteroides oleiciplenus YIT
12058]
gi|425725473|gb|EKU88344.1| DNA (cytosine-5-)-methyltransferase [Bacteroides oleiciplenus YIT
12058]
Length = 356
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 41/101 (40%), Gaps = 2/101 (1%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLF--VENVVGFETSDTHAKM 67
PPCQ ++ + ++ + K + P LF VE +V F+ T +
Sbjct: 78 GPPCQGFSVSNRKTRTVENENNGLFKEFLRFVDDLNPEWFLFENVEGLVNFDKGKTLRYI 137
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 108
+ Y T E IL +GVP R R+F + R + F
Sbjct: 138 LNQFKKIGYKTSEAILYASDYGVPQHRNRFFIVGNRNDIDF 178
>gi|254804105|ref|YP_003082326.1| putative type II DNA modification methyltransferase [Neisseria
meningitidis alpha14]
gi|254667647|emb|CBA03458.1| putative type II DNA modification methyltransferase [Neisseria
meningitidis alpha14]
Length = 315
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 44/101 (43%), Gaps = 6/101 (5%)
Query: 5 HAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD- 62
H LL+ PCQP++ G D R F I E++ K P +ENV T D
Sbjct: 62 HDILLAGFPCQPFSIAGKGLGFEDTRGTLFFNIAEIL--KTKQPKAFLLENVKRLTTHDS 119
Query: 63 --THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
T ++E L Y +L+ L FG+P R R + +
Sbjct: 120 GRTFRIILETLKQLGYTVYFKVLNTLDFGLPQKRERIYIIG 160
>gi|218247578|ref|YP_002372949.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801]
gi|218168056|gb|ACK66793.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801]
Length = 727
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQP++ G ++ +D R F I ++I K P + +ENV + + T +I
Sbjct: 74 PCQPFSICGKKEGFNDTRGTLFFYICQII--AAKQPQAVILENVKHLIHHQQGKTLETII 131
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 103
L + YL +L+ FGVP R R +A R
Sbjct: 132 YSLEDLGYLVDYQLLNAKDFGVPQHRERIVIIATR 166
>gi|218133430|ref|ZP_03462234.1| hypothetical protein BACPEC_01295 [[Bacteroides] pectinophilus ATCC
43243]
gi|217990805|gb|EEC56811.1| DNA (cytosine-5-)-methyltransferase [[Bacteroides] pectinophilus
ATCC 43243]
Length = 320
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 50/111 (45%), Gaps = 5/111 (4%)
Query: 4 AHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIP---HTVKPPHMLF--VENVVGF 58
A W PCQ + G Q+ R+ + I++L+ + KP ++L V+N++
Sbjct: 67 ADIWCFGFPCQDISVAGKQRGLVGKRSGIYYNIIDLLKGKEESAKPSYLLVENVKNLLSI 126
Query: 59 ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 109
A ++ + + Y + +L+ FGVP +R R F +A + R
Sbjct: 127 NAGFDFASVLSEMDEAGYDCRWQVLNSKNFGVPQNRERVFIIANLRSRGRR 177
>gi|154504826|ref|ZP_02041564.1| hypothetical protein RUMGNA_02336 [Ruminococcus gnavus ATCC 29149]
gi|153794709|gb|EDN77129.1| DNA (cytosine-5-)-methyltransferase [Ruminococcus gnavus ATCC
29149]
Length = 422
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 50/111 (45%), Gaps = 5/111 (4%)
Query: 4 AHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIP---HTVKPPHMLF--VENVVGF 58
A W PCQ + G Q+ R+ + I++L+ + KP ++L V+N++
Sbjct: 67 ADIWCFGFPCQDISVAGKQRGLVGKRSGIYYNIIDLLKGKEESAKPSYLLVENVKNLLSI 126
Query: 59 ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 109
A ++ + + Y + +L+ FGVP +R R F +A + R
Sbjct: 127 NAGFDFASVLSEMDEAGYDCRWQVLNSKNFGVPQNRERVFIIANLRSRGRR 177
>gi|409991833|ref|ZP_11275061.1| DNA (cytosine-5-)-methyltransferase [Arthrospira platensis str.
Paraca]
gi|409937298|gb|EKN78734.1| DNA (cytosine-5-)-methyltransferase [Arthrospira platensis str.
Paraca]
Length = 429
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 42/100 (42%), Gaps = 5/100 (5%)
Query: 5 HAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTH 64
H L PCQ ++ G + D R F +IL LI + P ENV G T D
Sbjct: 69 HILLAGFPCQSFSYAGKKAGFGDTRGTLFFEILRLIDS--QQPQAFIFENVRGLVTHDQG 126
Query: 65 AKMIEI---LANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
+ I + Y F+L+ +GVP +R R + +
Sbjct: 127 KTINTIRQKMQERGYSFDLFLLNSSNYGVPQNRVRAYMMG 166
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 262 LRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 312
+R TPRE A L FP FQ H + + Y LGNS++I VV + Q L
Sbjct: 366 VRRITPREAARLQGFPDSFQL--HPNQNKAYRQLGNSVTIPVVKAIAQELL 414
>gi|262038316|ref|ZP_06011702.1| modification methylase spri [Leptotrichia goodfellowii F0264]
gi|261747667|gb|EEY35120.1| modification methylase spri [Leptotrichia goodfellowii F0264]
Length = 318
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF---ETSDTHAKMI 68
PCQ ++ G ++ +D R + ++ P +ENV G E T K+I
Sbjct: 72 PCQTFSIVGKREGFNDKRGEIIYGLKNILKEKNTP--FFIMENVKGLANHEKGKTLKKII 129
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 106
E+L DY + IL L +GV R R + + +K L
Sbjct: 130 ELLEELDYHVEYKILDSLDYGVSQMRERLYIVGIKKEL 167
>gi|34451612|gb|AAQ72361.1| BsaWI methylase [Geobacillus stearothermophilus]
Length = 411
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 67/168 (39%), Gaps = 30/168 (17%)
Query: 12 PCQPYTRQGLQKQS-SDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHA----- 65
PC+ ++ G +S D R F + + + L M+ ENV G +T
Sbjct: 81 PCETFSTAGATSRSFYDHRQFLYREAIRLADAV--NARMILFENVPGIQTKKVAKDSDRL 138
Query: 66 ---KMIEILANSDYLTQ-EFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNN------ 115
++ + LA Y+ IL+ FGVP SR R+F LA R+ L R + N
Sbjct: 139 IIDEIYDDLAKYGYVHHISTILNAEDFGVPQSRERFFILASREKLDLRVPVAKNRKIVTV 198
Query: 116 ------------QLLRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCD 151
+ + S L N + + ++ D ++ KL++ D
Sbjct: 199 EEAFIDLPEEPKETINSAKKKLENGEEIEVEQYKDIDSAYSKLMKDRD 246
>gi|421711053|ref|ZP_16150397.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R030b]
gi|407213258|gb|EKE83116.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R030b]
Length = 355
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 6/114 (5%)
Query: 3 GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD 62
G + + PPCQ ++ +G D R F FL+ +E++ P + +ENV +
Sbjct: 72 GINMIIGGPPCQGFSNKGKNLGLKDPRNFLFLEYIEIVKAI--KPEIFIIENVKNLISCA 129
Query: 63 THAKMIEILANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLL 113
+ EI + L + IL+ +GVP +R R F + + SF LL
Sbjct: 130 KGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASR-FSFDFNLL 182
>gi|421882427|ref|ZP_16313698.1| DNA-cytosine methyltransferase [Helicobacter bizzozeronii CCUG
35545]
gi|375315272|emb|CCF81694.1| DNA-cytosine methyltransferase [Helicobacter bizzozeronii CCUG
35545]
Length = 313
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 13/134 (9%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G Q+ D R F +I + I H + P +LF+ENV +T D + E++
Sbjct: 71 PCQAFSIAGYQRGFEDTRGTLFFEIAK-IAHKHR-PKVLFLENVKNLKTHD-RGRTFEVI 127
Query: 72 ANS----DYLTQEFIL-SPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLG 126
N+ Y+ +L S +P +R R F +A R Q+ N+Q P P+
Sbjct: 128 CNTLSDLGYVIYSAVLNSATHANIPQNRERLFIVA----FDIR-QVENHQNFTFPKPVKP 182
Query: 127 NDDMTVITKHDQPD 140
N ++ ++ Q D
Sbjct: 183 NRNIHACLQNLQQD 196
>gi|293371777|ref|ZP_06618187.1| DNA (cytosine-5-)-methyltransferase [Bacteroides ovatus SD CMC 3f]
gi|292633229|gb|EFF51800.1| DNA (cytosine-5-)-methyltransferase [Bacteroides ovatus SD CMC 3f]
Length = 459
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 7/106 (6%)
Query: 6 AWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHA 65
++ PPCQ ++ G Q +D R FL ++LI K P +ENV G SD H
Sbjct: 65 GFIGGPPCQSWSEGGKQLGLNDDRGRLFLDYIQLIKQ--KRPKFFIIENVQGM-ISDKHF 121
Query: 66 K----MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 107
K + L + Y+ +L+ + +P R R F + K L+
Sbjct: 122 KTFLSFLSSLECAGYVVSYSLLNAADYCIPQDRFRVFIVGFIKELN 167
>gi|424780746|ref|ZP_18207616.1| Modification methylase [Catellicoccus marimammalium M35/04/3]
gi|422842671|gb|EKU27120.1| Modification methylase [Catellicoccus marimammalium M35/04/3]
Length = 416
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 108/305 (35%), Gaps = 63/305 (20%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF---ETSDTHAKMI 68
PCQ ++ G + DAR F L+ P + ENV G + +T +
Sbjct: 164 PCQSFSISGKRAGLDDARGTLFYDFARLVKEI--QPKVFIYENVPGMLNHDKGNTFKHIS 221
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGND 128
EI + +Y + IL+ +G+P +R R F + R L + + P+P+
Sbjct: 222 EIFDDLNYNWRFQILNSKDYGIPQNRKRLFIVGFRNDLDL-------DIFQFPTPI---- 270
Query: 129 DMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGAAEE 188
+ KH D+ K + + + +V+ + T AA F E
Sbjct: 271 KLNCTVKHFLEDNVDHKYFHGEKGFKWITKDESLKKRVSINSDICRT-QAANQQFNWCGE 329
Query: 189 TVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQP 248
V P+ L E W D VY
Sbjct: 330 MV-----------FKPIEL-EPWAYEDDRVYV---------------------------- 349
Query: 249 KNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLL 308
GK +++ E R TPRE L + +F+ + +Q Y GNS+ + V+ +L
Sbjct: 350 ---GKFNNI-EGVARKLTPRECLRLMGYDDNFKIV--VPDKQIYRQAGNSIVVNVLEHIL 403
Query: 309 QYLFA 313
Q + A
Sbjct: 404 QSIIA 408
>gi|56695946|ref|YP_166300.1| C-5 cytosine-specific family DNA methylase [Ruegeria pomeroyi
DSS-3]
gi|56677683|gb|AAV94349.1| DNA methylase, C-5 cytosine-specific family [Ruegeria pomeroyi
DSS-3]
Length = 373
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 109/299 (36%), Gaps = 37/299 (12%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFET---SDTHAK 66
PPCQ Y+ Q+ D RA F + L ++ P + +ENV G + + A
Sbjct: 79 GPPCQAYSVYNHQRGMHDERATLFKEYLRIVDGLR--PEWIVMENVTGIYSIGGGEAVAA 136
Query: 67 MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLG 126
+ LA Y +E +L ++GVP R R + R + + P P G
Sbjct: 137 IKSELAALGYEVEEAVLRAEEYGVPQERRRVVFIGNRVGVP----------ISHPEPTHG 186
Query: 127 -NDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGA 185
M +T D D P +L+ G + + T +
Sbjct: 187 PGRSMPFVTIKDAIGDLPALENGEAKPDAAYLD----GKPTSYQRQMRGNATVITNHAAP 242
Query: 186 AEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVY---PDSKRCCCFTKSYYRYVKGT-GS 241
V +DR L I GS DI + P + + RY + T
Sbjct: 243 RLGQVNMDR----------LPHIPPGGSWRDIPFDLLPAGMKRAKRSDHTKRYGRMTWDG 292
Query: 242 LLATVQPK-NKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSL 299
L TV K + + + + R + RE A L +FP F+F H S +Y +GN++
Sbjct: 293 LSCTVLTKCDIHWGAYIHPEQDRAISVREAARLQAFPDWFEF--HGSRTDQYVQVGNAV 349
>gi|157151353|ref|YP_001449946.1| cytosine-specific methyltransferase [Streptococcus gordonii str.
Challis substr. CH1]
gi|157076147|gb|ABV10830.1| cytosine-specific methyltransferase [Streptococcus gordonii str.
Challis substr. CH1]
Length = 406
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQ ++ G +K D R F ++L +I P +F+ENV VG + +T +
Sbjct: 86 PCQAFSIAGYRKGFDDDRGDLFFELLRMIEGC--RPRAIFIENVKNMVGHDHGNTFKVIR 143
Query: 69 EILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 101
E L ++Y + +L+ +G +P +R R + +
Sbjct: 144 EALTENNYFIKWKVLNGKDYGNIPQNRERIYIVG 177
>gi|325962428|ref|YP_004240334.1| DNA-methyltransferase Dcm [Arthrobacter phenanthrenivorans Sphe3]
gi|323468515|gb|ADX72200.1| DNA-methyltransferase Dcm [Arthrobacter phenanthrenivorans Sphe3]
Length = 454
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 12/120 (10%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG----FETSDTHA 65
PPCQ ++ G ++ +D R + LE + T P + +ENVVG F DT +
Sbjct: 97 GPPCQGFSLAG-RRNPADIRNELPWQYLEFVGAT--RPRAVVIENVVGMDRSFAAGDTSS 153
Query: 66 --KMIEILANSD--YLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF-RCQLLNNQLLRS 120
++ + LA + Y+ Q ++ + +G P RPR +A R+ ++ R N+ RS
Sbjct: 154 FHQLQQALAETGDGYIVQGVHVNAVHYGAPQHRPRLLIIALRRDVAAQRGVTATNETWRS 213
>gi|290969050|ref|ZP_06560585.1| DNA (cytosine-5-)-methyltransferase [Megasphaera genomosp. type_1
str. 28L]
gi|290781006|gb|EFD93599.1| DNA (cytosine-5-)-methyltransferase [Megasphaera genomosp. type_1
str. 28L]
Length = 333
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 9/112 (8%)
Query: 5 HAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFET 60
H LL+ PCQ ++ G ++ D R F + ++ + P ++F ENV V +
Sbjct: 67 HDILLAGFPCQAFSLAGKKRGFEDTRGTLFFDVARIVNY--HKPKVVFCENVKNLVNHDR 124
Query: 61 SDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK---PLSFR 109
T + + L + Y +L+ FGVP +R R + +A R+ P +FR
Sbjct: 125 GKTFKIINQTLQDLGYTVFHNVLNSKDFGVPQNRERIYIVAFREDIAPNTFR 176
>gi|268597921|ref|ZP_06132088.1| cytosine DNA methylase M.NgoI [Neisseria gonorrhoeae FA19]
gi|268551709|gb|EEZ46728.1| cytosine DNA methylase M.NgoI [Neisseria gonorrhoeae FA19]
Length = 320
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 44/101 (43%), Gaps = 6/101 (5%)
Query: 5 HAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD- 62
H LL+ PCQP++ G D R F I E++ K P +ENV T D
Sbjct: 67 HDILLAGFPCQPFSIAGKGLGFEDTRGTLFFNIAEIL--KTKQPKAFLLENVKRLTTHDS 124
Query: 63 --THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
T ++E L Y +L+ L FG+P R R + +
Sbjct: 125 GRTFRIILETLKQLGYTVYFKVLNTLDFGLPQKRERIYIVG 165
>gi|336115176|ref|YP_004569943.1| modification methylase [Bacillus coagulans 2-6]
gi|335368606|gb|AEH54557.1| Modification methylase [Bacillus coagulans 2-6]
Length = 446
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 5/104 (4%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQ ++ G + SDAR F +++ + P M ENV G D T A MI
Sbjct: 189 PCQAFSYAGKKMGLSDARGTLFYYYAQILKQLL--PKMFLAENVKGLVNHDNGRTLALMI 246
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQL 112
++ ++ Y + +L L + V R R + R L + L
Sbjct: 247 KVFSDIGYTVKWHVLRALDYDVAQKRERIVIIGIRNDLVEKYNL 290
>gi|229187780|ref|ZP_04314910.1| Cytosine-specific methyltransferase [Bacillus cereus BGSC 6E1]
gi|228595683|gb|EEK53373.1| Cytosine-specific methyltransferase [Bacillus cereus BGSC 6E1]
Length = 365
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 5/101 (4%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G + ++ R F +I L P LF+ENV G D IL
Sbjct: 78 PCQAFSIAGKRLGFAETRGTLFFEIARLAKEI--QPQYLFLENVKGLLNHDGGNTFRTIL 135
Query: 72 ANSD---YLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 109
+ D Y + +L+ FGVP +R R F + + S R
Sbjct: 136 STLDELGYDAEWQVLNSKDFGVPQNRERVFIIGHLRGRSRR 176
>gi|296313699|ref|ZP_06863640.1| modification methylase NgoBI [Neisseria polysaccharea ATCC 43768]
gi|296839717|gb|EFH23655.1| modification methylase NgoBI [Neisseria polysaccharea ATCC 43768]
Length = 315
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 44/101 (43%), Gaps = 6/101 (5%)
Query: 5 HAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD- 62
H LL+ PCQP++ G D R F I E++ K P +ENV T D
Sbjct: 62 HDILLAGFPCQPFSIAGKGLGFEDTRGTLFFNIAEIL--KTKQPKAFLLENVKRLTTHDS 119
Query: 63 --THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
T ++E L Y +L+ L FG+P R R + +
Sbjct: 120 GRTFRIILETLKQLGYTVYFKVLNTLDFGLPQKRERIYIVG 160
>gi|291569071|dbj|BAI91343.1| cytosine-specific methyltransferase [Arthrospira platensis NIES-39]
Length = 429
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 42/100 (42%), Gaps = 5/100 (5%)
Query: 5 HAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTH 64
H L PCQ ++ G + D R F +IL LI + P ENV G T D
Sbjct: 69 HILLAGFPCQSFSYAGKKAGFGDTRGTLFFEILRLI--DSQQPQAFIFENVRGLVTHDQG 126
Query: 65 AKMIEI---LANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
+ I + Y F+L+ +GVP +R R + +
Sbjct: 127 KTINTIRQKMQERGYSFDLFLLNSSNYGVPQNRVRAYMMG 166
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 262 LRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLF 312
+R TPRE A L FP FQ H + + Y LGNS++I VV + Q L
Sbjct: 366 VRRITPREAARLQGFPDSFQL--HPNQNKAYRQLGNSVTIPVVKAIAQELL 414
>gi|217032842|ref|ZP_03438321.1| hypothetical protein HPB128_165g1 [Helicobacter pylori B128]
gi|298737011|ref|YP_003729541.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8]
gi|216945425|gb|EEC24089.1| hypothetical protein HPB128_165g1 [Helicobacter pylori B128]
gi|298356205|emb|CBI67077.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8]
Length = 361
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 6/114 (5%)
Query: 3 GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD 62
G + + PPCQ ++ +G D R F FL+ +E++ P + +ENV +
Sbjct: 72 GINMIIGGPPCQGFSNKGKNLGLKDPRNFLFLEYIEIVKAI--KPEIFIIENVKNLISCA 129
Query: 63 THAKMIEILANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLL 113
+ EI + L + IL+ +GVP +R R F + + SF LL
Sbjct: 130 KGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASR-FSFDFNLL 182
>gi|427735817|ref|YP_007055361.1| DNA-methyltransferase Dcm [Rivularia sp. PCC 7116]
gi|427370858|gb|AFY54814.1| DNA-methyltransferase Dcm [Rivularia sp. PCC 7116]
Length = 337
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 9/101 (8%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKP--PHMLFVENVVG--FETSDTHAKM 67
PCQP++ G QK D+R + + VK P + ENV G + ++
Sbjct: 85 PCQPFSVGGKQKGLKDSR-----DGFPIFINAVKKLNPQIWLFENVRGLLYRNKWYFDEI 139
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 108
I+ L N DY+ + +L+ + FGVP +R R + F
Sbjct: 140 IQSLQNLDYIVEYKLLNAVNFGVPQNRERLIVVGHHGKFKF 180
>gi|59802299|ref|YP_209011.1| NgoIM [Neisseria gonorrhoeae FA 1090]
gi|59719194|gb|AAW90599.1| cytosine DNA methylase M.NgoI [Neisseria gonorrhoeae FA 1090]
Length = 315
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 44/101 (43%), Gaps = 6/101 (5%)
Query: 5 HAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD- 62
H LL+ PCQP++ G D R F I E++ K P +ENV T D
Sbjct: 62 HDILLAGFPCQPFSIAGKGLGFEDTRGTLFFNIAEIL--KTKQPKAFLLENVKRLTTHDS 119
Query: 63 --THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
T ++E L Y +L+ L FG+P R R + +
Sbjct: 120 GRTFRIILETLKQLGYTVYFKVLNTLDFGLPQKRERIYIVG 160
>gi|343520520|ref|ZP_08757489.1| modification methylase HpaII [Parvimonas sp. oral taxon 393 str.
F0440]
gi|343397478|gb|EGV10012.1| modification methylase HpaII [Parvimonas sp. oral taxon 393 str.
F0440]
Length = 346
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 8/108 (7%)
Query: 5 HAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDT 63
H LL+ PCQ ++ G ++ DAR F + +I P ++F ENV D
Sbjct: 67 HDILLAGFPCQAFSLAGHKRGFEDARGTLFFDVARIIKE--HKPKIVFCENVKNLVNHD- 123
Query: 64 HAKMIEILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 107
+ +++ N+ Y +L+ FGVP +R R + +A R ++
Sbjct: 124 RGRTFQVIRNTLEELGYAVFYQVLNSKDFGVPQNRERIYIVAFRNDIA 171
>gi|376006068|ref|ZP_09783405.1| Type II DNA modification enzyme (Methyltransferase),
Cytosine-specific methyltransferase, DNA-cytosine
5-methylase [Arthrospira sp. PCC 8005]
gi|423065083|ref|ZP_17053873.1| DNA-cytosine methyltransferase [Arthrospira platensis C1]
gi|375325524|emb|CCE19158.1| Type II DNA modification enzyme (Methyltransferase),
Cytosine-specific methyltransferase, DNA-cytosine
5-methylase [Arthrospira sp. PCC 8005]
gi|406714326|gb|EKD09494.1| DNA-cytosine methyltransferase [Arthrospira platensis C1]
Length = 342
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 5/94 (5%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG--FETSDTHAKM 67
PPCQP++ GLQK D+R F L+ I P + ENV G ++ K+
Sbjct: 90 GPPCQPFSVGGLQKGPRDSRD-GFPIFLDAIERY--QPAIAIFENVRGMLYKNRQYLEKI 146
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
+ L +Y +++ + +GVP R R F +A
Sbjct: 147 VAELERLNYRVDIKLINAVNYGVPQKRERLFVVA 180
>gi|209525305|ref|ZP_03273847.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
gi|209494320|gb|EDZ94633.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
Length = 342
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 5/94 (5%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG--FETSDTHAKM 67
PPCQP++ GLQK D+R F L+ I P + ENV G ++ K+
Sbjct: 90 GPPCQPFSVGGLQKGPRDSRD-GFPIFLDAIERY--QPAIAIFENVRGMLYKNRQYLEKI 146
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
+ L +Y +++ + +GVP R R F +A
Sbjct: 147 VAELERLNYRVDIKLINAVNYGVPQKRERLFVVA 180
>gi|386749158|ref|YP_006222365.1| cytosine specific DNA methyltransferase [Helicobacter cetorum MIT
00-7128]
gi|384555401|gb|AFI03735.1| cytosine specific DNA methyltransferase [Helicobacter cetorum MIT
00-7128]
Length = 355
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 5/97 (5%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIE 69
PPCQ ++ +G D R F FL+ ++++ P + +ENV + + E
Sbjct: 79 GPPCQGFSNKGKNLGLKDPRNFLFLEYIDIVKAI--KPQIFIIENVKNLISCAKGYFLKE 136
Query: 70 ILANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKR 103
I + L + IL+ +GVP SR R F + R
Sbjct: 137 IKEKFNILGYQLSYHILNARDYGVPQSRERAFIVGAR 173
>gi|407005987|gb|EKE21993.1| hypothetical protein ACD_7C00083G0006 [uncultured bacterium]
Length = 330
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 65/154 (42%), Gaps = 15/154 (9%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKM---I 68
PCQ ++ G +K SD R +++++ P +L ENV G D + +
Sbjct: 80 PCQTFSVIGQRKGMSDHRGQVIYGLIKIMKGKNLPYFIL--ENVKGLVNHDGGNSLRIIL 137
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGND 128
E L + Y +LS L FGVP R R + + RK L + N+ P P+
Sbjct: 138 EELDKAGYRVFYKVLSSLDFGVPQMRERIYFVGIRKDL-----VKENKNFEWPKPI---- 188
Query: 129 DMTVITKHDQPDDSWDKLLESCDPVERFLEFSNS 162
T ++ DD + E E FL+F N+
Sbjct: 189 -KTPKVEYYLIDDGELEFDERKKSYETFLKFINN 221
>gi|417921870|ref|ZP_12565360.1| modification methylase HpaII [Streptococcus cristatus ATCC 51100]
gi|342833755|gb|EGU68035.1| modification methylase HpaII [Streptococcus cristatus ATCC 51100]
Length = 452
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 50/127 (39%), Gaps = 17/127 (13%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G + D R F +I P LF+ENV G D IL
Sbjct: 76 PCQAFSIAGRRLGFEDTRGTLFFEIARAAKQI--QPRFLFLENVKGLLNHDKGRTFTTIL 133
Query: 72 ANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRK--------PLSFRCQLLNNQLLRS 120
D L + +L+ FGVP +R R F + + P Q N++ L+
Sbjct: 134 TTLDELGFDVEWQVLNSKNFGVPQNRERVFIIGHSRKRGTRLLFPFRREGQATNSETLK- 192
Query: 121 PSPLLGN 127
+LGN
Sbjct: 193 ---ILGN 196
>gi|15894780|ref|NP_348129.1| DNA-methyltransferase [Clostridium acetobutylicum ATCC 824]
gi|337736722|ref|YP_004636169.1| cytosine-specific DNA-methyltransferase [Clostridium acetobutylicum
DSM 1731]
gi|384458229|ref|YP_005670649.1| DNA-methyltransferase [Clostridium acetobutylicum EA 2018]
gi|15024448|gb|AAK79469.1|AE007660_12 DNA-methyltransferase (cytosine-specific), ortholog of BSP6I
Bsubtilis [Clostridium acetobutylicum ATCC 824]
gi|325508918|gb|ADZ20554.1| DNA-methyltransferase (cytosine-specific) [Clostridium
acetobutylicum EA 2018]
gi|336292975|gb|AEI34109.1| DNA-methyltransferase (cytosine-specific), BSP6I Bsubtilis
[Clostridium acetobutylicum DSM 1731]
Length = 415
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 12 PCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVKPPHMLFVENVVGFETSD---THA 65
PCQ ++ G QK D R S +K++ L+ P +LF+ENV + D T+
Sbjct: 127 PCQAFSIAGEQKGFDDHRGNLFISIIKLIRLLDSVHGKPRVLFLENVKNLMSHDGGRTYK 186
Query: 66 KMIEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 101
+ L Y+ +E +L+ + F +P +R R + +
Sbjct: 187 VIKSKLEKEGYIIKEKVLNTMDFSHLPQNRERIYIVG 223
>gi|169832810|ref|YP_001694558.1| methyl transferase [Streptococcus pneumoniae Hungary19A-6]
gi|168995312|gb|ACA35924.1| methyl transferase [Streptococcus pneumoniae Hungary19A-6]
Length = 452
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 50/127 (39%), Gaps = 17/127 (13%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G + D R F +I P LF+ENV G D IL
Sbjct: 76 PCQAFSIAGRRLGFEDTRGTLFFEIARAAKQI--QPRFLFLENVKGLLNHDKGRTFTTIL 133
Query: 72 ANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRK--------PLSFRCQLLNNQLLRS 120
D L + +L+ FGVP +R R F + + P Q N++ L+
Sbjct: 134 TTLDELGFDVEWQVLNSKDFGVPQNRERVFIIGHSRKKGTRLLFPFRREGQATNSETLK- 192
Query: 121 PSPLLGN 127
+LGN
Sbjct: 193 ---ILGN 196
>gi|383398018|gb|AFH22790.1| putative DNA methylase [Environmental Halophage eHP-35]
Length = 418
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 16/104 (15%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF------------E 59
PCQ ++ G ++ + +AR F +I+ + K P ML +ENV G E
Sbjct: 76 PCQSFSVAGNRQGTDEARGKLFREIVRIA--KAKKPEMLLLENVKGILSQKVVEDGGSVE 133
Query: 60 TSDTHA--KMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
+ HA ++++ L Y + +L+ +GVP +R R F +
Sbjct: 134 GTKGHAFTEVLQALHELGYCLEWQVLNSKHWGVPQNRERVFIIG 177
>gi|418962280|ref|ZP_13514147.1| modification methylase HpaII [Streptococcus anginosus subsp.
whileyi CCUG 39159]
gi|383345928|gb|EID24012.1| modification methylase HpaII [Streptococcus anginosus subsp.
whileyi CCUG 39159]
Length = 450
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 39/93 (41%), Gaps = 5/93 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G + D R F +I P LF+ENV G DT IL
Sbjct: 76 PCQAFSLAGRRLGFEDTRGTLFFEIARAAKQI--QPRFLFLENVKGLLNHDTGETFRTIL 133
Query: 72 ANSDYLTQEF---ILSPLQFGVPYSRPRYFCLA 101
A D L + IL+ F VP +R R F +
Sbjct: 134 ATLDELGYDVEWQILNSKDFQVPQNRERVFIIG 166
>gi|386816060|ref|ZP_10103278.1| DNA-cytosine methyltransferase [Thiothrix nivea DSM 5205]
gi|386420636|gb|EIJ34471.1| DNA-cytosine methyltransferase [Thiothrix nivea DSM 5205]
Length = 432
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQP++ G Q+ D R F ++ ++ P +ENV G T D T ++
Sbjct: 74 PCQPFSYAGKQQGFGDTRGTLFFEVERILRE--HQPKGFLLENVRGLTTHDKGRTFKTIL 131
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
+ L Y + +L+ FG+P +R R + +
Sbjct: 132 QHLEALGYGVEYLLLNGSSFGIPQNRVRVYIVG 164
>gi|293395454|ref|ZP_06639738.1| modification methylase HgiDII [Serratia odorifera DSM 4582]
gi|291422138|gb|EFE95383.1| modification methylase HgiDII [Serratia odorifera DSM 4582]
Length = 354
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 9/105 (8%)
Query: 4 AHAWLLSP--PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
A LLS PCQP+++Q K D R + + + P +F+ENV G +
Sbjct: 69 ADGLLLSACAPCQPFSQQNKYKNKDDERICLLDETHRFVSRLL--PEYIFLENVPGIQKI 126
Query: 62 DTH-----AKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
D + I +L +Y F+ + ++GVP R R+ LA
Sbjct: 127 DGSKESPFTRFISLLDKLNYHYVYFVANAEKYGVPQRRKRFVLLA 171
>gi|268595734|ref|ZP_06129901.1| cytosine DNA methylase M.NgoI [Neisseria gonorrhoeae 35/02]
gi|291044897|ref|ZP_06570606.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
gi|293397972|ref|ZP_06642178.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62]
gi|268549123|gb|EEZ44541.1| cytosine DNA methylase M.NgoI [Neisseria gonorrhoeae 35/02]
gi|291011791|gb|EFE03787.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
gi|291611918|gb|EFF40987.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62]
Length = 320
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 44/101 (43%), Gaps = 6/101 (5%)
Query: 5 HAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD- 62
H LL+ PCQP++ G D R F I E++ K P +ENV T D
Sbjct: 67 HDILLAGFPCQPFSIAGKGLGFEDTRGTLFFNIAEIL--KTKQPKAFLLENVKRLTTHDS 124
Query: 63 --THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
T ++E L Y +L+ L FG+P R R + +
Sbjct: 125 GRTFRIVLETLKQLGYTVYFKVLNTLDFGLPQKRERIYIVG 165
>gi|422302441|ref|ZP_16389804.1| Modification methylase Eco47II [Microcystis aeruginosa PCC 9806]
gi|389788313|emb|CCI16067.1| Modification methylase Eco47II [Microcystis aeruginosa PCC 9806]
Length = 412
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 11/104 (10%)
Query: 12 PCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVKPPHMLFVENVVGF---ETSDTHA 65
PCQP++ GL K D R F F + L+ + P + ENV G + +T
Sbjct: 140 PCQPFSYAGLGKGLEDLRGSLFFEFARCLQEVQ-----PKIAIAENVRGLLSNKKGETLQ 194
Query: 66 KMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 109
M+E L Y +LS VP R R +A R+ L+ +
Sbjct: 195 LMLEALQEIGYYAAYQVLSAQFLDVPQKRERLIIIATRQDLNIK 238
>gi|194099739|ref|YP_002002874.1| NgoIM [Neisseria gonorrhoeae NCCP11945]
gi|240013125|ref|ZP_04720038.1| NgoIM [Neisseria gonorrhoeae DGI18]
gi|240015568|ref|ZP_04722108.1| NgoIM [Neisseria gonorrhoeae FA6140]
gi|240120196|ref|ZP_04733158.1| NgoIM [Neisseria gonorrhoeae PID24-1]
gi|254492718|ref|ZP_05105889.1| modification methylase NgoBI [Neisseria gonorrhoeae 1291]
gi|268600171|ref|ZP_06134338.1| modification methylase NgoBI [Neisseria gonorrhoeae MS11]
gi|268600304|ref|ZP_06134471.1| modification methylase NgoBI [Neisseria gonorrhoeae PID18]
gi|268602536|ref|ZP_06136703.1| modification methylase NgoBI [Neisseria gonorrhoeae PID1]
gi|268681085|ref|ZP_06147947.1| modification methylase NgoBI [Neisseria gonorrhoeae PID332]
gi|268685237|ref|ZP_06152099.1| modification methylase NgoBI [Neisseria gonorrhoeae SK-92-679]
gi|268685565|ref|ZP_06152427.1| modification methylase NgoBI [Neisseria gonorrhoeae SK-93-1035]
gi|385336683|ref|YP_005890630.1| NgoIM [Neisseria gonorrhoeae TCDC-NG08107]
gi|193935029|gb|ACF30853.1| NgoIM [Neisseria gonorrhoeae NCCP11945]
gi|226511758|gb|EEH61103.1| modification methylase NgoBI [Neisseria gonorrhoeae 1291]
gi|268584302|gb|EEZ48978.1| modification methylase NgoBI [Neisseria gonorrhoeae MS11]
gi|268584435|gb|EEZ49111.1| modification methylase NgoBI [Neisseria gonorrhoeae PID18]
gi|268586667|gb|EEZ51343.1| modification methylase NgoBI [Neisseria gonorrhoeae PID1]
gi|268621369|gb|EEZ53769.1| modification methylase NgoBI [Neisseria gonorrhoeae PID332]
gi|268625521|gb|EEZ57921.1| modification methylase NgoBI [Neisseria gonorrhoeae SK-92-679]
gi|268625849|gb|EEZ58249.1| modification methylase NgoBI [Neisseria gonorrhoeae SK-93-1035]
gi|317165226|gb|ADV08767.1| NgoIM [Neisseria gonorrhoeae TCDC-NG08107]
Length = 315
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 44/101 (43%), Gaps = 6/101 (5%)
Query: 5 HAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD- 62
H LL+ PCQP++ G D R F I E++ K P +ENV T D
Sbjct: 62 HDILLAGFPCQPFSIAGKGLGFEDTRGTLFFNIAEIL--KTKQPKAFLLENVKRLTTHDS 119
Query: 63 --THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
T ++E L Y +L+ L FG+P R R + +
Sbjct: 120 GRTFRIVLETLKQLGYTVYFKVLNTLDFGLPQKRERIYIVG 160
>gi|312386601|emb|CBY05924.1| putative DNA methylase [Streptococcus pneumoniae]
Length = 452
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 50/127 (39%), Gaps = 17/127 (13%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G + D R F +I P LF+ENV G D IL
Sbjct: 76 PCQAFSIAGRRLGFEDTRGTLFFEIARAAKQI--QPRFLFLENVKGLLNHDKGRTFTTIL 133
Query: 72 ANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRK--------PLSFRCQLLNNQLLRS 120
D L + +L+ FGVP +R R F + + P Q N++ L+
Sbjct: 134 TTLDELGFDVEWQVLNSKDFGVPQNRERVFIIGHSRKRGTRLLFPFRREGQATNSETLK- 192
Query: 121 PSPLLGN 127
+LGN
Sbjct: 193 ---ILGN 196
>gi|397634955|gb|EJK71655.1| hypothetical protein THAOC_06884 [Thalassiosira oceanica]
Length = 632
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 109/318 (34%), Gaps = 77/318 (24%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF------------E 59
PCQ ++R+G Q D R + +++ ++ T +P +F ENV G E
Sbjct: 307 PCQAFSRRGEQGALRDDRGHLYRELVRVLCAT-RPKSFIF-ENVKGLVTLEGGYVNKGGE 364
Query: 60 TSDTHAKMIEILANSDYLTQEFILSPL--QFGVPYSRPRYFCLAKRKPLSFRCQLLNNQL 117
A M IL + E + L ++ VP R R F + R
Sbjct: 365 EMKAGAVMQRILDEFEACGYEVSWNILDAKYWVPQRRKRLFIVGIR-------------- 410
Query: 118 LRSPSPLLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGT 177
DD+ SWD + EF +G ST
Sbjct: 411 ----------DDIDAQF-------SWDW----------YDEFKTNG----------STDD 433
Query: 178 AAVDDFGAAEETVEVDRCVSIDHFLVPLSLI-ERWGSAMDIVYPDSKRCCCFTKSYYRYV 236
+ D E EVD C+S F L +RW + V+ +K+ SY +
Sbjct: 434 RVLSDI--LEPPHEVDTCLSSSQFDAMKRLRGDRWHEVEEAVFDVNKKTSTLISSYRGHS 491
Query: 237 KGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLG 296
T + +A K R+ TPRE A L FP + P +A
Sbjct: 492 SITTKYVME-------EADGTKRDVPRFLTPRECARLQGFPEWYAVPLAPDSDHEHAHFY 544
Query: 297 NSLSIAVVAPLLQYLFAQ 314
+ AVV PL+ L ++
Sbjct: 545 KGIGNAVVPPLIMRLGSE 562
>gi|419766709|ref|ZP_14292886.1| modification methylase HpaII [Streptococcus mitis SK579]
gi|383353749|gb|EID31352.1| modification methylase HpaII [Streptococcus mitis SK579]
Length = 452
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 50/127 (39%), Gaps = 17/127 (13%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G + D R F +I P LF+ENV G D IL
Sbjct: 76 PCQAFSIAGRRLGFEDTRGTLFFEIARAAKQI--QPRFLFLENVKGLLNHDKGRTFTTIL 133
Query: 72 ANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRK--------PLSFRCQLLNNQLLRS 120
D L + +L+ FGVP +R R F + + P Q N++ L+
Sbjct: 134 TTLDELGFDVEWQVLNSKDFGVPQNRERVFIIGHSRKRGTRLLFPFRREGQATNSETLK- 192
Query: 121 PSPLLGN 127
+LGN
Sbjct: 193 ---ILGN 196
>gi|225571452|ref|ZP_03780448.1| hypothetical protein CLOHYLEM_07550 [Clostridium hylemonae DSM
15053]
gi|225159928|gb|EEG72547.1| hypothetical protein CLOHYLEM_07550 [Clostridium hylemonae DSM
15053]
Length = 377
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Query: 12 PCQPYTRQGLQKQSSD-ARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKM 67
PCQ ++ GLQK +D + F I +I K P +ENV + D T +
Sbjct: 148 PCQAFSICGLQKGFADNTKGTLFFDIARIIKE--KQPQAFVLENVKNLASHDNGKTLKTI 205
Query: 68 IEILANS-DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 106
+E+L + Y +L+ L FG+P R R + +KP
Sbjct: 206 LEVLRDELGYHVDYKLLNALDFGLPQKRERIIIIGSKKPF 245
>gi|429460710|gb|AFZ85150.1| type II restriction-modification system methylation subunit [Vibrio
cholerae]
Length = 420
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 62/154 (40%), Gaps = 36/154 (23%)
Query: 5 HAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD- 62
H LL+ PCQP++ GL+ D R F I ++ K P +ENV G + D
Sbjct: 156 HDVLLAGFPCQPFSHAGLKLGIEDTRGTLFHDIANIL--ETKKPKFALLENVKGLISHDK 213
Query: 63 --THAKMIEILANSDY-------------------LTQEFILSPLQFGVPYSRPRYFCLA 101
T +++ L Y L +E +L + FG+P +R R + +
Sbjct: 214 GYTLKVILKTLTKMGYSCNIPKSVIEHGSTKEIQALAKEMVLKSVDFGIPQNRQRIYIVL 273
Query: 102 KR----------KPLSFRCQLLNNQLLRSPSPLL 125
R KPL + + ++L +P P L
Sbjct: 274 WRDGEVKSFEYPKPLGIEVK-VGDKLEENPDPKL 306
>gi|387879636|ref|YP_006309939.1| putative DNA methylase [Streptococcus parasanguinis FW213]
gi|386793089|gb|AFJ26124.1| putative DNA methylase [Streptococcus parasanguinis FW213]
Length = 480
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 50/127 (39%), Gaps = 17/127 (13%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G + D R F +I P LF+ENV G D IL
Sbjct: 104 PCQAFSIAGRRLGFEDTRGTLFFEIARAAKQI--QPRFLFLENVKGLLNHDKGRTFTTIL 161
Query: 72 ANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRK--------PLSFRCQLLNNQLLRS 120
D L + +L+ FGVP +R R F + + P Q N++ L++
Sbjct: 162 TTLDELGFDVEWQVLNSKDFGVPQNRERVFIIGHSRKKGTRLLFPFRREGQATNSETLKA 221
Query: 121 PSPLLGN 127
LGN
Sbjct: 222 ----LGN 224
>gi|410609536|ref|YP_006953590.1| type II DNA methyltransferase M.EcoO34I [Escherichia coli]
gi|417126105|ref|ZP_11973900.1| putative modification methylase HaeIII [Escherichia coli 97.0246]
gi|420091914|ref|ZP_14603644.1| putative site-specific DNA-methyltransferase [Escherichia coli
O111:H8 str. CVM9602]
gi|420119027|ref|ZP_14628334.1| putative site-specific DNA-methyltransferase [Escherichia coli
O26:H11 str. CVM10030]
gi|424747487|ref|ZP_18175667.1| putative site-specific DNA-methyltransferase [Escherichia coli
O26:H11 str. CFSAN001629]
gi|425376183|ref|ZP_18760775.1| cytosine-specific methyltransferase [Escherichia coli EC1865]
gi|355469723|gb|AER93372.1| type II DNA methyltransferase M.EcoO34I [Escherichia coli]
gi|386145375|gb|EIG91834.1| putative modification methylase HaeIII [Escherichia coli 97.0246]
gi|394381647|gb|EJE59324.1| putative site-specific DNA-methyltransferase [Escherichia coli
O111:H8 str. CVM9602]
gi|394432251|gb|EJF04359.1| putative site-specific DNA-methyltransferase [Escherichia coli
O26:H11 str. CVM10030]
gi|408313887|gb|EKJ30394.1| cytosine-specific methyltransferase [Escherichia coli EC1865]
gi|421946117|gb|EKU03269.1| putative site-specific DNA-methyltransferase [Escherichia coli
O26:H11 str. CFSAN001629]
Length = 385
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 13/124 (10%)
Query: 10 SPPCQPYTRQGLQKQSSDAR-AFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMI 68
PPCQ ++ GL+ + + A SF +I++ I P +ENV S + +
Sbjct: 72 GPPCQDFSHAGLRIEGARANLTRSFSEIIKRIK-----PKWFVMENVDRALRSGAYLEAR 126
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGND 128
I S Y E +L + GVP R R F + K L R + N+++ S D
Sbjct: 127 GIFKESGYGLTEIVLDASKCGVPQKRKRLFVIGK---LDVRDGFILNEVMCGIS----KD 179
Query: 129 DMTV 132
MTV
Sbjct: 180 SMTV 183
>gi|289167633|ref|YP_003445902.1| methyl transferase [Streptococcus mitis B6]
gi|288907200|emb|CBJ22035.1| methyl transferase [Streptococcus mitis B6]
Length = 452
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 50/127 (39%), Gaps = 17/127 (13%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G + D R F +I P LF+ENV G D IL
Sbjct: 76 PCQAFSIAGRRLGFEDTRGTLFFEIARAAKQI--QPRFLFLENVKGLLNHDKGRTFTTIL 133
Query: 72 ANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRK--------PLSFRCQLLNNQLLRS 120
D L + +L+ FGVP +R R F + + P Q N++ L+
Sbjct: 134 TTLDELGFDVEWQVLNSKDFGVPQNRERVFIIGHSRKRGTRLLFPFRREGQATNSETLK- 192
Query: 121 PSPLLGN 127
+LGN
Sbjct: 193 ---ILGN 196
>gi|417848557|ref|ZP_12494499.1| modification methylase HpaII [Streptococcus mitis SK1073]
gi|339452489|gb|EGP65117.1| modification methylase HpaII [Streptococcus mitis SK1073]
Length = 452
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 50/127 (39%), Gaps = 17/127 (13%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G + D R F +I P LF+ENV G D IL
Sbjct: 76 PCQAFSIAGRRLGFEDTRGTLFFEIARAAKQI--QPRFLFLENVKGLLNHDKGRTFTTIL 133
Query: 72 ANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRK--------PLSFRCQLLNNQLLRS 120
D L + +L+ FGVP +R R F + + P Q N++ L++
Sbjct: 134 TTLDELGFDVEWQVLNSKDFGVPQNRERVFIIGHSRKKGTRLLFPFRREGQTTNSETLKT 193
Query: 121 PSPLLGN 127
LGN
Sbjct: 194 ----LGN 196
>gi|166365618|ref|YP_001657891.1| cytosine-specific methyltransferase [Microcystis aeruginosa
NIES-843]
gi|166087991|dbj|BAG02699.1| cytosine-specific methyltransferase [Microcystis aeruginosa
NIES-843]
Length = 412
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 11/104 (10%)
Query: 12 PCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVKPPHMLFVENVVGF---ETSDTHA 65
PCQP++ GL K D R F F + L+ + P + ENV G + +T
Sbjct: 140 PCQPFSYAGLGKGLEDLRGSLFFEFARCLQEVQ-----PKIAIAENVRGLLSNKKGETLQ 194
Query: 66 KMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 109
M+E L Y +LS VP R R +A R+ L+ +
Sbjct: 195 LMLEALQEIGYYAAYQVLSAQFLDVPQKRERLIIIATRQDLNIK 238
>gi|342210802|ref|ZP_08703552.1| Cytosine-specific methyltransferase [Mycoplasma anatis 1340]
gi|341578846|gb|EGS29191.1| Cytosine-specific methyltransferase [Mycoplasma anatis 1340]
Length = 397
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Query: 10 SPPCQPYTRQGLQKQ-SSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHA 65
S PCQ + QGL++ + R+ +I +I ++ K P +L +ENV V + +
Sbjct: 142 SFPCQDISSQGLKRGITKGTRSGLLYEIERIIKNSTKRPKILLLENVKNLVSKKFINDFK 201
Query: 66 KMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
K IE+L Y T +L+ FG +R R F ++
Sbjct: 202 KWIEVLDELGYETSFKVLNASDFGSAQNRERVFAVS 237
>gi|427715942|ref|YP_007063936.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 7507]
gi|427348378|gb|AFY31102.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 7507]
Length = 328
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 9/109 (8%)
Query: 4 AHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKP--PHMLFVENVVG--FE 59
A + PPCQP++ G QK D+R + + VK P + +ENV G ++
Sbjct: 77 AKVIIGGPPCQPFSVGGNQKGLQDSR-----DGFPIFINAVKKLCPEIWLLENVRGLLYK 131
Query: 60 TSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 108
++++ L N Y+ + +L+ + FGVP +R R + + F
Sbjct: 132 NRWYLDEIVQSLQNLGYIVEWKLLNAVDFGVPQNRERLIVVGHKGNFRF 180
>gi|419264366|ref|ZP_13806760.1| DNA-cytosine methyltransferase family protein [Escherichia coli
DEC10C]
gi|378120434|gb|EHW81908.1| DNA-cytosine methyltransferase family protein [Escherichia coli
DEC10C]
Length = 297
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 13/124 (10%)
Query: 10 SPPCQPYTRQGLQKQSSDAR-AFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMI 68
PPCQ ++ GL+ + + A SF +I++ I P +ENV S + +
Sbjct: 72 GPPCQDFSHAGLRIEGARANLTRSFSEIIKRIK-----PKWFVMENVDRALRSGAYLEAR 126
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLGND 128
I S Y E +L + GVP R R F + K L R + N+++ S D
Sbjct: 127 GIFKESGYGLTEIVLDASKCGVPQKRKRLFVIGK---LDVRDGFILNEVMCGIS----KD 179
Query: 129 DMTV 132
MTV
Sbjct: 180 SMTV 183
>gi|30523050|gb|AAP31838.1| AsiSI methylase [Arthrobacter sp. S]
Length = 390
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 5/102 (4%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS---DTHAK 66
PPCQP++ G + D R + + ++ V+P ++F ENV +TS D
Sbjct: 80 GPPCQPFSIAGKRLGLDDPRGHLIAEFVRIV-DEVRPKAVVF-ENVPALQTSHNGDVVRA 137
Query: 67 MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 108
+ L Y + IL+ +GVP +R R +A R F
Sbjct: 138 TTDALEQLGYGVRRAILNAADWGVPQARKRLILIAVRDVAEF 179
>gi|187778292|ref|ZP_02994765.1| hypothetical protein CLOSPO_01884 [Clostridium sporogenes ATCC
15579]
gi|187771917|gb|EDU35719.1| DNA (cytosine-5-)-methyltransferase [Clostridium sporogenes ATCC
15579]
Length = 355
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 5/103 (4%)
Query: 4 AHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKP--PHMLFVENVVGFETS 61
+ W PCQ ++ G ++ R+ ++ L + P L ENV G +S
Sbjct: 62 SDCWCFGAPCQDFSVAGKREGLEGDRSSLVREVFRLCGEIEEEHRPQWLLYENVKGMLSS 121
Query: 62 DTHAKMIEILANSDYLTQEF---ILSPLQFGVPYSRPRYFCLA 101
+ +EIL D L + +L+ FGVP +R R F +
Sbjct: 122 NKGLDYLEILFEMDSLGYDIEWQLLNSKDFGVPQNRERVFTIG 164
>gi|322510834|gb|ADX06148.1| putative C-5 cytosine-specific DNA methyltransferase [Organic Lake
phycodnavirus 1]
Length = 344
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQP+++ G K D R F I++ + + P ++ +ENV+G D T K+
Sbjct: 137 PCQPFSQCGQHKGFDDKRGTLFFNIMKFVDY--HKPKVIILENVMGLLNHDGGKTFEKIK 194
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 103
+ S+Y ++ +G+P R R + R
Sbjct: 195 CDIETSNYSITYKVIKCSDYGLPQMRKRLIIVGVR 229
>gi|410476734|ref|YP_006743493.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus
pneumoniae gamPNI0373]
gi|406369679|gb|AFS43369.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus
pneumoniae gamPNI0373]
Length = 452
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 50/127 (39%), Gaps = 17/127 (13%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G + D R F +I P LF+ENV G D IL
Sbjct: 76 PCQAFSLAGRRLGFEDTRGTLFFEIARAAKQI--QPRFLFLENVKGLLNHDKGRTFTTIL 133
Query: 72 ANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRK--------PLSFRCQLLNNQLLRS 120
D L + +L+ FGVP +R R F + + P Q N++ L++
Sbjct: 134 TTFDELGFDVEWQVLNSKDFGVPQNRERVFIIGHSRKKGTRLLFPFRREGQATNSETLKA 193
Query: 121 PSPLLGN 127
LGN
Sbjct: 194 ----LGN 196
>gi|425465275|ref|ZP_18844585.1| Modification methylase HindV (modular protein) [Microcystis
aeruginosa PCC 9809]
gi|389832515|emb|CCI23796.1| Modification methylase HindV (modular protein) [Microcystis
aeruginosa PCC 9809]
Length = 405
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 45/103 (43%), Gaps = 3/103 (2%)
Query: 2 YGAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS 61
Y + SPPCQ ++ G ++ RA L E++ T P +ENV E S
Sbjct: 158 YNPEIIVGSPPCQDFSSAG-KRDEGLGRANLTLTFAEIV--TGVSPQWFVMENVDRIEKS 214
Query: 62 DTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
+I + Y E +++ GVP +R RYF + K K
Sbjct: 215 KILTLAKQIFKSHGYGLTEKVINSCYCGVPQTRKRYFLIGKMK 257
>gi|347726864|gb|AEP19810.1| C5 cytosine DNA methyltransferase [Helicobacter pylori]
Length = 355
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 6/107 (5%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIE 69
PPCQ ++ +G D R F FL+ +E++ P + +ENV + + E
Sbjct: 79 GPPCQGFSNKGKNLGLKDPRNFLFLEYIEIVKAI--KPEIFIIENVKNIISCAKGYFLEE 136
Query: 70 ILANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLL 113
I + L + IL+ +GVP SR R F + + SF LL
Sbjct: 137 IKERLNALGYQLSYQILNAKDYGVPQSRERAFIVGASR-FSFDFNLL 182
>gi|152998369|ref|YP_001343204.1| DNA-cytosine methyltransferase [Marinomonas sp. MWYL1]
gi|150839293|gb|ABR73269.1| DNA-cytosine methyltransferase [Marinomonas sp. MWYL1]
Length = 417
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 25/120 (20%)
Query: 4 AHAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD 62
AH LL+ PCQP++ GL+ D R F I +I K P +ENV G + D
Sbjct: 155 AHDVLLAGFPCQPFSHAGLKLGIEDTRGTLFHDIARIIEE--KNPRFAVLENVKGLISHD 212
Query: 63 ---THAKMIEILANSDY-------------------LTQEFILSPLQFGVPYSRPRYFCL 100
T +++ L N Y L + +L + FGVP +R R + +
Sbjct: 213 KGHTLKVILKTLTNIGYSCNIPKSTIENGSTKEIQTLAKSMVLKSVDFGVPQNRQRIYIV 272
>gi|254410214|ref|ZP_05023994.1| C-5 cytosine-specific DNA methylase superfamily [Coleofasciculus
chthonoplastes PCC 7420]
gi|196183250|gb|EDX78234.1| C-5 cytosine-specific DNA methylase superfamily [Coleofasciculus
chthonoplastes PCC 7420]
Length = 392
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQP++ G +K D R F I++++ P +ENV + E A ++
Sbjct: 76 PCQPFSSAGKKKGVRDPRGHIFQVIIDVLKR--HKPRFFILENVKRLLSMEEGTHFATIL 133
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
LA+ DY + +++ + G+P +R R L
Sbjct: 134 SELAHLDYTIEWRLVNAMHLGLPQNRQRVVILG 166
>gi|12229862|sp|Q59603.2|MTB1_NEIGO RecName: Full=Modification methylase NgoBI; Short=M.NgoBI; AltName:
Full=Cytosine-specific methyltransferase NgoBI;
Short=M.NgoI
gi|5924404|gb|AAB03206.2| cytosine DNA methylase M.NgoI [Neisseria gonorrhoeae]
Length = 317
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 5/93 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQP++ G D R F I E++ K P +ENV T D T ++
Sbjct: 70 PCQPFSIAGKGLGFEDTRGTLFFNIAEIL--KTKQPKAFLLENVKRLTTHDSGRTFRIVL 127
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
E L Y +L+ L FG+P R R + +
Sbjct: 128 ETLKQLGYTVYFKVLNTLDFGLPQKRERIYIVG 160
>gi|407473320|ref|YP_006787720.1| modification methylase Sau96I [Clostridium acidurici 9a]
gi|407049828|gb|AFS77873.1| modification methylase Sau96I [Clostridium acidurici 9a]
Length = 429
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 5/100 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQ ++ G +K D R F +++ P + ENV G + D T MI
Sbjct: 177 PCQTFSYAGNKKGLEDTRGTMFYYYAQILDQL--KPKVFLAENVKGLVSHDNGRTLQTMI 234
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 108
++ + Y Q +L L +GV R R + RK +
Sbjct: 235 DVFSELGYKIQWKVLKALDYGVAQKRERIVIVGIRKDIDI 274
>gi|386748038|ref|YP_006221246.1| DNA-cytosine methyltransferase [Helicobacter cetorum MIT 99-5656]
gi|384554280|gb|AFI06036.1| DNA-cytosine methyltransferase [Helicobacter cetorum MIT 99-5656]
Length = 437
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQP++ G ++ D R F +I+ + K P +ENV G T D T + M+
Sbjct: 103 PCQPFSSAGKRRGLEDTRGTLFFEIMRFL--LTKKPKGFLLENVPGLLTHDKGKTFSIML 160
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
L + +L+ FGV +R R + +
Sbjct: 161 HHLEECGHFVNYKLLNAKDFGVAQNRERLYIVG 193
>gi|168485680|ref|ZP_02710188.1| modification methylase HaeIII (Cytosine-specificmethyltransferase
HaeIII) (M.HaeIII) [Streptococcus pneumoniae CDC1087-00]
gi|418184341|ref|ZP_12820889.1| DNA-cytosine methyltransferase family protein [Streptococcus
pneumoniae GA47283]
gi|419510257|ref|ZP_14049901.1| DNA (cytosine-5-)-methyltransferase family protein [Streptococcus
pneumoniae NP141]
gi|421212588|ref|ZP_15669550.1| modification methylase HgiDII [Streptococcus pneumoniae 2070108]
gi|421214780|ref|ZP_15671711.1| modification methylase HgiDII [Streptococcus pneumoniae 2070109]
gi|183571278|gb|EDT91806.1| modification methylase HaeIII (Cytosine-specificmethyltransferase
HaeIII) (M.HaeIII) [Streptococcus pneumoniae CDC1087-00]
gi|353851939|gb|EHE31929.1| DNA-cytosine methyltransferase family protein [Streptococcus
pneumoniae GA47283]
gi|379633450|gb|EHZ98019.1| DNA (cytosine-5-)-methyltransferase family protein [Streptococcus
pneumoniae NP141]
gi|395580995|gb|EJG41468.1| modification methylase HgiDII [Streptococcus pneumoniae 2070108]
gi|395582339|gb|EJG42801.1| modification methylase HgiDII [Streptococcus pneumoniae 2070109]
Length = 363
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 9/100 (9%)
Query: 11 PPCQPYTRQGLQKQSSDAR--AFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMI 68
PPCQ ++ G ++ D F FL+++ + P L +ENVVG +
Sbjct: 81 PPCQGFSTIGTNNENDDRNQLVFQFLRLINEL-----NPDFLLMENVVGMTRTRNEKIFK 135
Query: 69 EILANSD--YLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 106
+ L + D Y IL+ +GVP SR R RK +
Sbjct: 136 KFLTSIDNNYSVIYDILNTADYGVPQSRKRLVLHGIRKEI 175
>gi|237753192|ref|ZP_04583672.1| cytosine specific DNA methyltransferase [Helicobacter winghamensis
ATCC BAA-430]
gi|229375459|gb|EEO25550.1| cytosine specific DNA methyltransferase [Helicobacter winghamensis
ATCC BAA-430]
Length = 354
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG-FETSDTHAKMI 68
PPCQ ++ +G + D R F FL+ L+++ P + +ENV F T++ + K
Sbjct: 82 GPPCQGFSLKGKKLGLQDPRNFLFLEYLDIVKQL--QPELFIIENVKSIFSTANGYFKN- 138
Query: 69 EI---LANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
EI + + Y IL+ F VP +R R F +A +K
Sbjct: 139 EIERHIQDLGYKVDSAILNAKDFCVPQNRERAFFIAHKK 177
>gi|170739771|ref|YP_001768426.1| DNA-cytosine methyltransferase [Methylobacterium sp. 4-46]
gi|168194045|gb|ACA15992.1| DNA-cytosine methyltransferase [Methylobacterium sp. 4-46]
Length = 434
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 17/105 (16%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIE 69
PPCQ ++ GL + D R+ L+ + P ++ +ENVVGF + K
Sbjct: 89 GPPCQGFSTNGL-RHPDDPRSAMVDVYLQYV--AAVQPRLVLLENVVGFRS----MKHRT 141
Query: 70 ILANSDYLTQEF----------ILSPLQFGVPYSRPRYFCLAKRK 104
+ SDY+T+E +L +GVP RPR+ LA K
Sbjct: 142 GGSYSDYVTRELDRLGYQAWSDVLRAADWGVPQRRPRFVLLAAPK 186
>gi|428318060|ref|YP_007115942.1| DNA-cytosine methyltransferase [Oscillatoria nigro-viridis PCC
7112]
gi|428241740|gb|AFZ07526.1| DNA-cytosine methyltransferase [Oscillatoria nigro-viridis PCC
7112]
Length = 345
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQP++ G + D R F I ++I +K P ++ +ENV + + +T +I
Sbjct: 69 PCQPFSICGKKLGFEDTRGTLFFDICKII--KIKQPKVIVLENVKHLIHHDKGNTLKVII 126
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
L + Y +L+ FG+P R R F +A
Sbjct: 127 ASLEDLGYSVNYKMLNAKDFGIPQHRERIFIIA 159
>gi|417686624|ref|ZP_12335901.1| modification methylase HpaII [Streptococcus pneumoniae GA41301]
gi|418159800|ref|ZP_12796499.1| modification methylase HpaII [Streptococcus pneumoniae GA17227]
gi|419521050|ref|ZP_14060646.1| DNA (cytosine-5-)-methyltransferase family protein [Streptococcus
pneumoniae GA05245]
gi|332075476|gb|EGI85945.1| modification methylase HpaII [Streptococcus pneumoniae GA41301]
gi|353821533|gb|EHE01709.1| modification methylase HpaII [Streptococcus pneumoniae GA17227]
gi|379540064|gb|EHZ05241.1| DNA (cytosine-5-)-methyltransferase family protein [Streptococcus
pneumoniae GA05245]
Length = 452
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 50/127 (39%), Gaps = 17/127 (13%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G + D R F +I P LF+ENV G D IL
Sbjct: 76 PCQAFSIAGRRLGFEDTRGTLFFEIARAAKQI--QPRFLFLENVKGLLNHDKGRTFTTIL 133
Query: 72 ANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRK--------PLSFRCQLLNNQLLRS 120
D L + +L+ FGVP +R R F + + P Q N++ L++
Sbjct: 134 TTLDELGFDVEWQVLNSKDFGVPQNRERVFIIGHSRKKGTRLLFPFRREGQATNSETLKT 193
Query: 121 PSPLLGN 127
LGN
Sbjct: 194 ----LGN 196
>gi|325973250|ref|YP_004250314.1| cytosine-specific DNA modification methylase, HpaII-like protein
[Mycoplasma suis str. Illinois]
gi|323651852|gb|ADX97934.1| cytosine-specific DNA modification methylase, HpaII-like protein
[Mycoplasma suis str. Illinois]
Length = 326
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHA--KMIE 69
PCQ +++ G +K D R F +I+ ++ K P +ENV T + K+IE
Sbjct: 88 PCQAFSQAGKKKGFEDERGALFFEIIRILKD--KKPKTFLLENVKNLRTHNKGETLKVIE 145
Query: 70 I-LANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 106
L + +Y +L FG+P +R R + + K L
Sbjct: 146 QHLKDLNYHITYKVLKSRDFGIPQNRERIYIVGFNKDL 183
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 258 KEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVV 304
K ++ R TPRE A L FP +F P +S Q Y GNS+++ V+
Sbjct: 269 KNKNPRKLTPREAARLQGFPDNFLIP--VSDNQAYKQFGNSVTVPVI 313
>gi|312874669|ref|ZP_07734692.1| modification methylase HaeIII [Lactobacillus iners LEAF 2053A-b]
gi|311089796|gb|EFQ48217.1| modification methylase HaeIII [Lactobacillus iners LEAF 2053A-b]
Length = 331
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 7/102 (6%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIE 69
PPCQ ++ G K +DAR F + + ++ K P ENV G + H+ +E
Sbjct: 68 GPPCQSWSEAGSLKGINDARGQLFYQYIRILKD--KKPKFFLAENVKGM-MAKRHSVAVE 124
Query: 70 ILA----NSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 107
+ + Y +L+ +GVP R R F + RK L+
Sbjct: 125 NIVLQFEKAGYDVFIHLLNASDYGVPQDRKRVFYVGFRKDLN 166
>gi|256822924|ref|YP_003146887.1| DNA-cytosine methyltransferase [Kangiella koreensis DSM 16069]
gi|256796463|gb|ACV27119.1| DNA-cytosine methyltransferase [Kangiella koreensis DSM 16069]
Length = 419
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 12 PCQPYTRQGLQKQSSD--ARAFSFLKILELIPHTVKPPHMLF--VENVVGFETSDTHAKM 67
PCQ ++ G ++ SD R F KI ++I T KP L V+N+ G + +T +
Sbjct: 165 PCQAFSVAGYREGFSDKKGRGNLFFKIHDIIK-TKKPEAFLLENVKNLQGHDGGNTFKVI 223
Query: 68 IEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLA 101
+E L S Y +L+ + FG VP +R R + +
Sbjct: 224 VEYLHESGYSVISNVLNSMDFGDVPQNRERIYIIG 258
>gi|440752731|ref|ZP_20931934.1| hypothetical protein O53_1103 [Microcystis aeruginosa TAIHU98]
gi|440177224|gb|ELP56497.1| hypothetical protein O53_1103 [Microcystis aeruginosa TAIHU98]
Length = 728
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQP++ G + D R F I E++ +K P ++ +ENV D K ++I+
Sbjct: 74 PCQPFSISGKRAGFRDTRGTLFFHICEIV--ELKKPKIILLENVKHLIHLDK-GKNLDII 130
Query: 72 ANS----DYLTQEFILSPLQFGVPYSRPRYFCLA 101
+S YL +L+ FGVP +R R +A
Sbjct: 131 LHSLEELGYLVDYKLLNAKNFGVPQNRERIIIIA 164
>gi|419529667|ref|ZP_14069199.1| DNA (cytosine-5-)-methyltransferase family protein [Streptococcus
pneumoniae GA40028]
gi|379575136|gb|EHZ40071.1| DNA (cytosine-5-)-methyltransferase family protein [Streptococcus
pneumoniae GA40028]
Length = 363
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 9/100 (9%)
Query: 11 PPCQPYTRQGLQKQSSDAR--AFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMI 68
PPCQ ++ G ++ D F FL+++ + P L +ENVVG +
Sbjct: 81 PPCQGFSTIGTNNENDDRNQLVFQFLRLINEL-----NPDFLLMENVVGMTRTRNEKIFK 135
Query: 69 EILANSD--YLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 106
+ L + D Y IL+ +GVP SR R RK +
Sbjct: 136 KFLTSIDNNYSVIYDILNTADYGVPQSRKRLVLHGIRKEI 175
>gi|260579295|ref|ZP_05847178.1| modification methylase NaeI (cytosine-specificmethyltransferase
NaeI) (M.NaeI) [Corynebacterium jeikeium ATCC 43734]
gi|258602594|gb|EEW15888.1| modification methylase NaeI (cytosine-specificmethyltransferase
NaeI) (M.NaeI) [Corynebacterium jeikeium ATCC 43734]
Length = 372
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 6/99 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFET---SDTHAKMI 68
PC P++ G Q D R F + LEL + P L +ENV G + +++
Sbjct: 107 PCPPFSIAGKQLGQDDERDL-FPRALELTAQSR--PKALMLENVRGLAQPRFARYRNELV 163
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 107
L Y T +++ FGVP RPR+ +A R+P +
Sbjct: 164 AELEELGYRTFWEVVTAADFGVPQLRPRFVLVALREPYA 202
>gi|365833197|ref|ZP_09374718.1| DNA (cytosine-5-)-methyltransferase [Coprobacillus sp. 3_3_56FAA]
gi|365258810|gb|EHM88814.1| DNA (cytosine-5-)-methyltransferase [Coprobacillus sp. 3_3_56FAA]
Length = 324
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 54/98 (55%), Gaps = 8/98 (8%)
Query: 12 PCQPYTRQGLQKQSSD--ARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAK 66
PCQ ++ G ++ +D R F ++++++ +K P ++F+ENV V + T
Sbjct: 78 PCQAFSIAGYREGFADHHGRGELFFEVMDIV--RIKNPKVIFLENVKNLVSHDNGRTFQI 135
Query: 67 MIEILANSDYLTQEFILSPLQFG-VPYSRPRYFCLAKR 103
++ L N+ Y + +L+ +++G VP +R R + +A R
Sbjct: 136 IMAELKNAGYHIKYKVLNSMEYGDVPQNRERIYIVAFR 173
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 30/50 (60%)
Query: 262 LRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYL 311
+R TPRE L FP ++ P+ +++ Y GNS+S++V++ + + +
Sbjct: 269 IRKLTPRECFALQGFPKNYVLPNDIAMSYLYKQAGNSVSVSVISRIAEQI 318
>gi|326381717|ref|ZP_08203411.1| cytosine-specific methyltransferase [Gordonia neofelifaecis NRRL
B-59395]
gi|326199964|gb|EGD57144.1| cytosine-specific methyltransferase [Gordonia neofelifaecis NRRL
B-59395]
Length = 356
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 100/280 (35%), Gaps = 39/280 (13%)
Query: 7 WLLS-PPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHA 65
W++ PPCQ Y+ G ++ D R FL+ ++ P +ENV+G +
Sbjct: 78 WVVGGPPCQGYSTVG-KRNREDPRNVLFLQFRRIVKGLR--PKGFMIENVLGLKDMSYEQ 134
Query: 66 KMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLL 125
++ E + Y + +L+ + GVP R R + R F+ P +
Sbjct: 135 EVAESFKDLGYRVRFMVLTSAEHGVPQLRRRVVFVGHRDRGLFQ------------GPPI 182
Query: 126 GNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDFGA 185
+DD T ++ D D L E E++ + L
Sbjct: 183 THDDETYVSVADAIFD-----LPELSAGEAATEYTKPPSTPYQKLMHLPGDVLQGHSVSN 237
Query: 186 AEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLAT 245
E H + +S I G+ I P + F SY R ++ T
Sbjct: 238 HPE-----------HLVKAISYIPDGGNRTAIP-PKLQPRAGFHNSYSRLASWRPAVAIT 285
Query: 246 VQPKNKGKASSLKEQHL---RYFTPREVANLHSFPGDFQF 282
+N GK S + H R T RE A L SFP FQF
Sbjct: 286 ---QNLGKPSGTRCIHPTQDRGLTTREGARLQSFPDRFQF 322
>gi|386748262|ref|YP_006221470.1| DNA-cytosine methyltransferase [Helicobacter cetorum MIT 99-5656]
gi|384554504|gb|AFI06260.1| DNA-cytosine methyltransferase [Helicobacter cetorum MIT 99-5656]
Length = 294
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF---ETSDTHAKMI 68
PCQ ++ G Q+ D R F + LI P + ENV G +T M
Sbjct: 6 PCQSFSLVGKQRGLEDTRGTLFYEYARLIKEI--QPKVFIYENVKGLLSHNRGETFKIME 63
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 109
++ Y + +L+ +G+P +R R F + RK L +
Sbjct: 64 QVFDALGYTRYKAVLNAKDYGIPQNRERLFVVGFRKDLGVK 104
>gi|383318860|ref|YP_005379701.1| DNA-methyltransferase (dcm) [Methanocella conradii HZ254]
gi|379320230|gb|AFC99182.1| DNA-methyltransferase (dcm) [Methanocella conradii HZ254]
Length = 420
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 12 PCQPYTRQGLQKQSSDA-RAFSFLKILELIPHTVKPPHMLF--VENVVGFETSDTHAKMI 68
PCQP+++ G QK +D R F +IL++I + P +++F V N+ T +
Sbjct: 69 PCQPFSKAGSQKGLNDTERGTLFYEILKIIDYH-DPKYLIFENVPNIRRHNNGQTWRIIE 127
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 106
+L + Y +SP FG+P R R + + K+ L
Sbjct: 128 GLLRDRGYDISCNDISPHHFGIPQIRLRTYIVGKKNSL 165
>gi|335049000|ref|ZP_08542011.1| modification methylase HpaII [Megasphaera sp. UPII 199-6]
gi|333764445|gb|EGL41839.1| modification methylase HpaII [Megasphaera sp. UPII 199-6]
Length = 333
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 9/112 (8%)
Query: 5 HAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFET 60
H LL+ PCQ ++ G ++ D R F + ++ + P ++F ENV V +
Sbjct: 67 HDILLAGFPCQAFSLAGKKRGFEDTRGTLFFDVARIVNY--HKPKVVFCENVKNLVNHDR 124
Query: 61 SDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK---PLSFR 109
T + + L + Y +L+ FGVP +R R + +A R+ P +FR
Sbjct: 125 GKTFKIINQTLQDLGYKVFHKVLNSKDFGVPQNRERIYIVAFREDIAPNTFR 176
>gi|153814253|ref|ZP_01966921.1| hypothetical protein RUMTOR_00462 [Ruminococcus torques ATCC 27756]
gi|145848649|gb|EDK25567.1| DNA (cytosine-5-)-methyltransferase [Ruminococcus torques ATCC
27756]
Length = 422
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 50/111 (45%), Gaps = 5/111 (4%)
Query: 4 AHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIP---HTVKPPHMLF--VENVVGF 58
A W PCQ + G Q+ R+ + I++L+ + KP ++L V+N++
Sbjct: 67 ADIWCFGFPCQDISVAGKQRGLVGKRSGIYYNIIDLLKGKEESSKPSYLLVENVKNLLSI 126
Query: 59 ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 109
A ++ + + Y + +L+ FGVP +R R F +A + R
Sbjct: 127 NAGFDFASVLSEMDEAGYDCRWQVLNSKNFGVPQNRERVFIIANLRSRGRR 177
>gi|421765734|ref|ZP_16202515.1| DNA-cytosine methyltransferase [Lactococcus garvieae DCC43]
gi|407625819|gb|EKF52507.1| DNA-cytosine methyltransferase [Lactococcus garvieae DCC43]
Length = 407
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 262 LRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFA 313
+R TPRE N+ FP DF+ P L+ Y GNS+ + V+ + Q + A
Sbjct: 274 IRKLTPRETFNVQGFPKDFKLPEKLANSSLYKQAGNSVVVPVIKRIAQKIAA 325
>gi|379730544|ref|YP_005322740.1| DNA-cytosine methyltransferase [Saprospira grandis str. Lewin]
gi|378576155|gb|AFC25156.1| DNA-cytosine methyltransferase [Saprospira grandis str. Lewin]
Length = 418
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 53/128 (41%), Gaps = 21/128 (16%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G + D R F + E+I K P +F+ENV G D + IL
Sbjct: 159 PCQAFSIAGKRGGFEDTRGTLFFDVAEIIRR--KKPKAIFLENVKGLRNHDKGKTLSTIL 216
Query: 72 ANSDYLTQEF--------ILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSP 123
L ++ +++ FGVP +R R F + FR + N P
Sbjct: 217 ---HVLREDLGYSVPDPQVVNARDFGVPQNRERIFIVG------FREDIANEVAFEYPKA 267
Query: 124 LLGNDDMT 131
L N+++T
Sbjct: 268 L--NEEVT 273
>gi|444386994|ref|ZP_21185020.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pneumoniae
PCS125219]
gi|444389554|ref|ZP_21187469.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pneumoniae
PCS70012]
gi|444392434|ref|ZP_21190161.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pneumoniae
PCS81218]
gi|444394487|ref|ZP_21192038.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pneumoniae
PNI0002]
gi|444397790|ref|ZP_21195273.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pneumoniae
PNI0006]
gi|444400419|ref|ZP_21197821.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pneumoniae
PNI0007]
gi|444402865|ref|ZP_21200013.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pneumoniae
PNI0008]
gi|444405895|ref|ZP_21202736.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pneumoniae
PNI0009]
gi|444407404|ref|ZP_21204071.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pneumoniae
PNI0010]
gi|444412188|ref|ZP_21208510.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pneumoniae
PNI0153]
gi|444414172|ref|ZP_21210467.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pneumoniae
PNI0199]
gi|444417871|ref|ZP_21213873.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pneumoniae
PNI0360]
gi|444419599|ref|ZP_21215449.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pneumoniae
PNI0427]
gi|444254204|gb|ELU60650.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pneumoniae
PCS125219]
gi|444256017|gb|ELU62355.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pneumoniae
PCS70012]
gi|444259729|gb|ELU66038.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pneumoniae
PNI0002]
gi|444260447|gb|ELU66755.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pneumoniae
PNI0006]
gi|444263398|gb|ELU69574.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pneumoniae
PCS81218]
gi|444265713|gb|ELU71705.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pneumoniae
PNI0008]
gi|444266396|gb|ELU72351.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pneumoniae
PNI0007]
gi|444271000|gb|ELU76751.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pneumoniae
PNI0010]
gi|444271801|gb|ELU77546.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pneumoniae
PNI0009]
gi|444274710|gb|ELU80352.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pneumoniae
PNI0153]
gi|444282446|gb|ELU87708.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pneumoniae
PNI0360]
gi|444282932|gb|ELU88155.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pneumoniae
PNI0199]
gi|444286502|gb|ELU91480.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pneumoniae
PNI0427]
Length = 362
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 50/127 (39%), Gaps = 17/127 (13%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G + D R F +I P LF+ENV G D IL
Sbjct: 76 PCQAFSLAGRRLGFEDTRGTLFFEIARAAKQI--QPRFLFLENVKGLLNHDKGRTFTTIL 133
Query: 72 ANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRK--------PLSFRCQLLNNQLLRS 120
D L + +L+ FGVP +R R F + + P Q N++ L++
Sbjct: 134 TTFDELGFDVEWQVLNSKDFGVPQNRERVFIIGHSRKKGTRLLFPFRREGQATNSETLKA 193
Query: 121 PSPLLGN 127
LGN
Sbjct: 194 ----LGN 196
>gi|387907427|ref|YP_006337761.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori
XZ274]
gi|387572362|gb|AFJ81070.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori
XZ274]
Length = 355
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 6/114 (5%)
Query: 3 GAHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD 62
G + + PPCQ ++ +G D R F FL+ +E++ P + +ENV +
Sbjct: 72 GINMIIGGPPCQGFSNKGKNLGLKDPRNFLFLEYIEIVKAL--KPEIFIIENVKNLISCA 129
Query: 63 THAKMIEI---LANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLL 113
+ EI L Y IL+ +GVP +R R F + + SF LL
Sbjct: 130 KGYFLEEIKERLNALGYQVSYQILNAKDYGVPQNRERAFVVGASR-FSFDFNLL 182
>gi|119511452|ref|ZP_01630563.1| modification methylase NlaIV [Nodularia spumigena CCY9414]
gi|119463917|gb|EAW44843.1| modification methylase NlaIV [Nodularia spumigena CCY9414]
Length = 433
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 6/101 (5%)
Query: 5 HAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD- 62
H LL+ PCQ ++ G ++ D R F +I L+ T KP +F ENV G + D
Sbjct: 68 HEVLLAGFPCQSFSHAGKKEGFGDTRGTLFFEITRLLD-TYKPQAFIF-ENVRGIYSHDQ 125
Query: 63 --THAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
T A + + Y F+L+ FG+P +R R + +
Sbjct: 126 GKTLATIKHEIQKRGYSFDAFLLNSANFGLPQNRVRIYLIG 166
Score = 37.4 bits (85), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 228 FTKSYYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLS 287
F+ Y++V + T+ + + Q +R TPRE A L FP F H +
Sbjct: 333 FSFEVYKFVD-PNKISVTLVASDANRLGVYHNQRVRRLTPREAARLQGFPDSFLL--HPN 389
Query: 288 LRQRYALLGNSLSIAVVAPLLQ 309
+ Y LGNS+SI VV + +
Sbjct: 390 DDKAYHQLGNSVSINVVKAVAE 411
>gi|331091171|ref|ZP_08340013.1| hypothetical protein HMPREF9477_00656 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330405393|gb|EGG84929.1| hypothetical protein HMPREF9477_00656 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 375
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 22/110 (20%)
Query: 12 PCQPYTRQGLQKQSSDA-RAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKM 67
PCQ +++ GL++ +D + F I E+I T P +F+ENV V + +T +
Sbjct: 75 PCQTFSKAGLEEGFNDTEKGIIFNHIAEIIRRT--RPRAVFLENVDNLVRHDKGNTFRVI 132
Query: 68 I----------------EILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
I ++L Y ++FI + FG+P +RPR + +A
Sbjct: 133 INTLEKTLNYKVIGVTYDMLGEPTYNGKDFIRNSRNFGIPQNRPRTYIMA 182
>gi|335437887|ref|ZP_08560645.1| cytosine-specific methyltransferase [Halorhabdus tiamatea SARL4B]
gi|335438177|ref|ZP_08560927.1| cytosine-specific methyltransferase [Halorhabdus tiamatea SARL4B]
gi|334892866|gb|EGM31093.1| cytosine-specific methyltransferase [Halorhabdus tiamatea SARL4B]
gi|334894048|gb|EGM32256.1| cytosine-specific methyltransferase [Halorhabdus tiamatea SARL4B]
Length = 398
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 42/105 (40%), Gaps = 4/105 (3%)
Query: 5 HAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTH 64
H + PPCQ ++ G + D R L E + V P + +ENV
Sbjct: 74 HLLFMGPPCQGISQAGGEIDPYDPRNEHILGTTEWV--RVLDPQVAIIENVDALVRDHGT 131
Query: 65 AKMI--EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 107
K I E L+ Y + L + GVP R R F +A R LS
Sbjct: 132 LKKIVTEQLSEHGYTVETIRLDAAEHGVPQHRSRAFIIAVRDDLS 176
>gi|68536951|ref|YP_251655.1| DNA restriction-modification system, DNA methylase [Corynebacterium
jeikeium K411]
gi|68264550|emb|CAI38038.1| putative DNA restriction-modification system, DNA methylase
[Corynebacterium jeikeium K411]
Length = 341
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFET---SDTHAKMI 68
PC P++ G Q D R F + LEL + P L +ENV G + +++
Sbjct: 76 PCPPFSIAGKQLGQDDERDL-FPRALELTAQSR--PKALMLENVRGLAQPRFARYRNELV 132
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKP 105
L Y T +++ FGVP RPR+ +A R+P
Sbjct: 133 AELEELGYRTFWEVVTAADFGVPQLRPRFVLVALREP 169
>gi|225849813|ref|YP_002730047.1| modification methylase FnuDI [Persephonella marina EX-H1]
gi|225646519|gb|ACO04705.1| putative modification methylase FnuDI [Persephonella marina EX-H1]
Length = 307
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 42/101 (41%), Gaps = 1/101 (0%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PC+P++ L+K+ S F ++ L +KP +F ENVV T K I L
Sbjct: 68 PCKPWSTLNLKKRGSSHEDFVLMEKYFLHVLEIKPAVFVF-ENVVPVGKDKTLRKFIRKL 126
Query: 72 ANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQL 112
Y E + FG +R RYF K S R Q
Sbjct: 127 RAHGYSIYETKIKYSDFGAAIARERYFAFGFYKDKSARKQF 167
>gi|169786848|ref|YP_001700742.1| modification methylase (Cytosine-specific
methyltransferase)(HpaIIM-like) [Acinetobacter
baumannii]
gi|169150765|emb|CAP02959.1| modification methylase (Cytosine-specific
methyltransferase)(HpaIIM-like) [Acinetobacter
baumannii]
Length = 366
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 7/98 (7%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G + D R F + ++I K P F+ENV G + D + IL
Sbjct: 112 PCQAFSIAGKRSGFEDTRGTLFFDVADIIKR--KQPKAFFLENVKGLVSHDKGKTLRTIL 169
Query: 72 A--NSD---YLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
D Y+ + I++ FGVP +R R F + K
Sbjct: 170 QVLREDLGYYVPEPKIINAKDFGVPQNRERIFIVGFHK 207
>gi|160883583|ref|ZP_02064586.1| hypothetical protein BACOVA_01555 [Bacteroides ovatus ATCC 8483]
gi|423291618|ref|ZP_17270465.1| DNA (cytosine-5-)-methyltransferase [Bacteroides ovatus CL02T12C04]
gi|156110996|gb|EDO12741.1| DNA (cytosine-5-)-methyltransferase [Bacteroides ovatus ATCC 8483]
gi|392662741|gb|EIY56297.1| DNA (cytosine-5-)-methyltransferase [Bacteroides ovatus CL02T12C04]
Length = 417
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 18/104 (17%)
Query: 10 SPPCQPYTRQGLQKQSSDAR---AFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAK 66
PPCQ ++ G +K+ D R S++K +EL+ P MLF ENV GF K
Sbjct: 94 GPPCQGFSMAGRRKED-DVRNHLVHSYIKFIELVH-----PKMLFFENVKGFTQEFKKNK 147
Query: 67 ---------MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
++E L Y T +++ +GVP R R+ +
Sbjct: 148 EKGIAYSHLVVEELEKLGYRTASQLVNFGDYGVPQKRTRFILVG 191
>gi|350645903|emb|CCD59448.1| DNA (cytosine-5)-methyltransferase, putative [Schistosoma mansoni]
Length = 42
Score = 42.7 bits (99), Expect = 0.21, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 276 FPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFA 313
FP F FP H++ +QR LLGNS++I VV+ L+ + F
Sbjct: 4 FPKSFDFPEHITEKQRLRLLGNSVNILVVSHLIYWAFG 41
>gi|313201769|ref|YP_004040427.1| modification methylase [Methylovorus sp. MP688]
gi|312441085|gb|ADQ85191.1| putative modification methylase [Methylovorus sp. MP688]
Length = 378
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLF--VENVVGFETSDTHAKMIE 69
PCQP++ G ++ D R F I++ + KP + + V+ ++ E + A +++
Sbjct: 70 PCQPFSSAGKKEGIRDPRGTLFQSIVKTLDKN-KPKYFILENVKRLLSMENGEHFATILQ 128
Query: 70 ILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 103
L+ Y + +++ + FG+P +R R F R
Sbjct: 129 ELSTLGYCVEWRLINAIHFGLPQNRQRLFITGIR 162
>gi|424033621|ref|ZP_17773034.1| modification methylase HaeIII [Vibrio cholerae HENC-01]
gi|424037455|ref|ZP_17776242.1| modification methylase HaeIII [Vibrio cholerae HENC-02]
gi|408874280|gb|EKM13454.1| modification methylase HaeIII [Vibrio cholerae HENC-01]
gi|408895524|gb|EKM31886.1| modification methylase HaeIII [Vibrio cholerae HENC-02]
Length = 337
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 13/107 (12%)
Query: 10 SPPCQPYTRQGLQKQSSDARA---FSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAK 66
PPCQ ++ G Q+ D R F F++ILE K P ENV G + + HA
Sbjct: 71 GPPCQSWSEAGAQRGIEDKRGQLFFDFIRILE-----AKKPKFFLAENVSGMQHT-RHAN 124
Query: 67 MI----EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 109
+ ++ ++ Y +++ + +G R R + R L+ +
Sbjct: 125 ALNNIKQMFKDAGYDLYYQMMNAVDYGAAQDRKRVIFIGFRSDLNIK 171
>gi|15901190|ref|NP_345794.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus
pneumoniae TIGR4]
gi|418091962|ref|ZP_12729104.1| modification methylase HpaII [Streptococcus pneumoniae GA44452]
gi|418110308|ref|ZP_12747331.1| modification methylase HpaII [Streptococcus pneumoniae GA49447]
gi|418162396|ref|ZP_12799079.1| modification methylase HpaII [Streptococcus pneumoniae GA17328]
gi|418201916|ref|ZP_12838347.1| modification methylase HpaII [Streptococcus pneumoniae GA52306]
gi|419431719|ref|ZP_13971858.1| modification methylase HpaII [Streptococcus pneumoniae EU-NP05]
gi|419453511|ref|ZP_13993483.1| modification methylase HpaII [Streptococcus pneumoniae EU-NP03]
gi|419460167|ref|ZP_14000096.1| modification methylase HpaII [Streptococcus pneumoniae GA02270]
gi|419462499|ref|ZP_14002405.1| modification methylase HpaII [Streptococcus pneumoniae GA02714]
gi|419489566|ref|ZP_14029315.1| modification methylase HpaII [Streptococcus pneumoniae GA44386]
gi|14972819|gb|AAK75434.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus
pneumoniae TIGR4]
gi|353764062|gb|EHD44612.1| modification methylase HpaII [Streptococcus pneumoniae GA44452]
gi|353782511|gb|EHD62945.1| modification methylase HpaII [Streptococcus pneumoniae GA49447]
gi|353827368|gb|EHE07520.1| modification methylase HpaII [Streptococcus pneumoniae GA17328]
gi|353868598|gb|EHE48484.1| modification methylase HpaII [Streptococcus pneumoniae GA52306]
gi|379531172|gb|EHY96407.1| modification methylase HpaII [Streptococcus pneumoniae GA02270]
gi|379531970|gb|EHY97203.1| modification methylase HpaII [Streptococcus pneumoniae GA02714]
gi|379587108|gb|EHZ51958.1| modification methylase HpaII [Streptococcus pneumoniae GA44386]
gi|379626244|gb|EHZ90864.1| modification methylase HpaII [Streptococcus pneumoniae EU-NP03]
gi|379629969|gb|EHZ94561.1| modification methylase HpaII [Streptococcus pneumoniae EU-NP05]
Length = 407
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 50/127 (39%), Gaps = 17/127 (13%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G + D R F +I P LF+ENV G D IL
Sbjct: 77 PCQAFSIAGRRLGFEDTRGTLFFEIARAAKQI--QPRFLFLENVKGLLNHDKGRTFTTIL 134
Query: 72 ANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRK--------PLSFRCQLLNNQLLRS 120
D L + +L+ FGVP +R R F + + P Q N++ L++
Sbjct: 135 TTLDELGFDVEWQVLNSKDFGVPKNRERVFIIGHSRKKGTRLLFPFRREGQATNSETLKA 194
Query: 121 PSPLLGN 127
LGN
Sbjct: 195 ----LGN 197
>gi|420197905|ref|ZP_14703625.1| putative modification methylase HhaI [Staphylococcus epidermidis
NIHLM020]
gi|420228144|ref|ZP_14732898.1| putative modification methylase HhaI [Staphylococcus epidermidis
NIH05003]
gi|394265252|gb|EJE09912.1| putative modification methylase HhaI [Staphylococcus epidermidis
NIHLM020]
gi|394295118|gb|EJE38773.1| putative modification methylase HhaI [Staphylococcus epidermidis
NIH05003]
Length = 402
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 262 LRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQ 309
+R TPRE NL FP D+ P +S Q Y GNS+ + V+ + +
Sbjct: 273 IRKLTPRETFNLQGFPKDYTLPKEMSNGQLYKQAGNSVVVTVIERIAK 320
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 6/101 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQ ++ G +K D R F ++L +I K P +F+ENV T D T +
Sbjct: 84 PCQAFSIAGYRKGFDDHRGDLFFELLRVIKS--KSPECIFIENVKNMVTHDHGNTFKVIK 141
Query: 69 EILANSDYLTQEFILSPLQFG-VPYSRPRYFCLAKRKPLSF 108
E L + Y + +L+ +G +P +R R + + + +F
Sbjct: 142 EALVLNGYSIKWKVLNAKDYGNIPQNRERIYIVGFKNKTAF 182
>gi|390442178|ref|ZP_10230192.1| Cytosine-specific methyltransferase [Microcystis sp. T1-4]
gi|425472072|ref|ZP_18850923.1| Cytosine-specific methyltransferase [Microcystis aeruginosa PCC
9701]
gi|389834470|emb|CCI34318.1| Cytosine-specific methyltransferase [Microcystis sp. T1-4]
gi|389881963|emb|CCI37552.1| Cytosine-specific methyltransferase [Microcystis aeruginosa PCC
9701]
Length = 728
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQP++ G + D R F I E++ +K P ++ +ENV D K ++I+
Sbjct: 74 PCQPFSISGKRAGFRDTRGTLFFHICEIV--ELKKPKIILLENVKHLIHLDK-GKNLDII 130
Query: 72 ANS----DYLTQEFILSPLQFGVPYSRPRYFCLA 101
+S YL +L+ FGVP +R R +A
Sbjct: 131 LHSLEELGYLVDYKLLNAKDFGVPQNRERIIIIA 164
>gi|127439|sp|P05302.1|MTD1_DESNO RecName: Full=Modification methylase DdeI; Short=M.DdeI; AltName:
Full=Cytosine-specific methyltransferase DdeI
gi|79418|pir||S00543 site-specific DNA-methyltransferase (cytosine-specific) (EC
2.1.1.73) DdeI - Desulfovibrio desulfuricans
gi|40795|emb|CAA68505.1| DdeI methylase [Desulfovibrio vulgaris]
Length = 415
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 14/121 (11%)
Query: 11 PPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAK---- 66
PPCQ ++ G + Q D R F+ + + P +ENV+G + T ++
Sbjct: 74 PPCQGFSLSGNRDQK-DPRNSLFVDFVRFVKFF--SPKFFVMENVLGILSMKTKSRQYVK 130
Query: 67 --MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPL 124
+ E +N Y IL+ +GVP SR R F + + + LN Q+L PS +
Sbjct: 131 DIIAEEFSNVGYKVCVIILNACDYGVPQSRQRVFFIGLKSD-----RPLNQQILTPPSKV 185
Query: 125 L 125
+
Sbjct: 186 I 186
>gi|2522459|gb|AAC45757.1| M.BssHII methylase [Geobacillus stearothermophilus]
Length = 375
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 3/97 (3%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLF--VENVVGFETSDTHAKM 67
PPCQ +++ G QK ++D R + L I + PP + V N+ G + + + +
Sbjct: 242 GPPCQAFSQAGKQKATNDPRGNLIYEYLRFI-EKINPPFFVMENVANLKGVQRGELYQDI 300
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
+E ++N Y L +G P R R L +K
Sbjct: 301 LERMSNLGYNVTVAPLLAADYGAPQLRKRLIFLGCKK 337
>gi|218895988|ref|YP_002444399.1| cytosine-specific methyltransferase [Bacillus cereus G9842]
gi|423371043|ref|ZP_17348383.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus AND1407]
gi|218540614|gb|ACK93008.1| cytosine-specific methyltransferase NlaX [Bacillus cereus G9842]
gi|401102869|gb|EJQ10854.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus AND1407]
Length = 348
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 12/117 (10%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQP++ G +K D R F +I+ ++ H P +ENV + D +I
Sbjct: 88 PCQPFSNVGYRKGLEDPRGELFFEIVRILRHY--KPSFFILENVSKISSVSSGDALKTII 145
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPR-YFCLAKRKPLSFRCQLLNNQLLRSPSPL 124
L + Y + L +G+P R R +FC R+ + N+LL P P+
Sbjct: 146 SELEEAGYNVHLWDLYADHYGLPQKRRRLFFCGVLRE------YSIGNELLLEPQPI 196
>gi|225164697|ref|ZP_03726934.1| DNA-cytosine methyltransferase [Diplosphaera colitermitum TAV2]
gi|224800687|gb|EEG19046.1| DNA-cytosine methyltransferase [Diplosphaera colitermitum TAV2]
Length = 372
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 7/114 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHA---KMI 68
PC P++ G Q +D R F + L L+ +KP + +ENV GF + A +
Sbjct: 75 PCPPFSTAGKQLGKNDERDL-FPEALRLV-REIKP-RAVMLENVGGFASQKFSAYRRHIF 131
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPS 122
+ L + Y ++ + GVP RPRY + RK R +N +++ +P+
Sbjct: 132 DDLMDMGYTPSARLIQASELGVPQLRPRYIIVGLRKDDYLRFS-MNFKVITAPT 184
>gi|108562472|ref|YP_626788.1| cytosine specific DNA methyltransferase [Helicobacter pylori HPAG1]
gi|107836245|gb|ABF84114.1| cytosine specific DNA methyltransferase [Helicobacter pylori HPAG1]
Length = 355
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 6/107 (5%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIE 69
PPCQ ++ +G D R F FL+ +E++ P + +ENV + + E
Sbjct: 79 GPPCQGFSNKGKNLGLKDPRNFLFLEYIEIVKAI--KPEIFIIENVKNLISCAKGYFLEE 136
Query: 70 ILANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLL 113
I + L + IL+ +GVP +R R F + + SF +LL
Sbjct: 137 IKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASR-FSFDFKLL 182
>gi|417934599|ref|ZP_12577919.1| DNA (cytosine-5-)-methyltransferase [Streptococcus mitis bv. 2 str.
F0392]
gi|340771169|gb|EGR93684.1| DNA (cytosine-5-)-methyltransferase [Streptococcus mitis bv. 2 str.
F0392]
Length = 452
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 50/127 (39%), Gaps = 17/127 (13%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G + D R F +I P LF+ENV G D IL
Sbjct: 76 PCQAFSIAGRRLGFDDTRGTLFFEIARAAKQI--QPRFLFLENVKGLLNHDKGRTFTTIL 133
Query: 72 ANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRK--------PLSFRCQLLNNQLLRS 120
D L + +L+ FGVP +R R F + + P Q N++ L++
Sbjct: 134 TTLDELGFDVEWQVLNSKDFGVPQNRERVFIIGHSRKKCTRLLFPFRREGQATNSETLKA 193
Query: 121 PSPLLGN 127
LGN
Sbjct: 194 ----LGN 196
>gi|404481724|ref|ZP_11016954.1| DNA (cytosine-5-)-methyltransferase [Clostridiales bacterium
OBRC5-5]
gi|404345028|gb|EJZ71382.1| DNA (cytosine-5-)-methyltransferase [Clostridiales bacterium
OBRC5-5]
Length = 346
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 6/107 (5%)
Query: 5 HAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFET 60
H LL+ PCQ ++ G ++ DAR F + ++ + P ++F ENV V +
Sbjct: 67 HDILLAGFPCQAFSLAGQKRGFEDARGTLFFDVARIVKY--HKPKVVFCENVKNLVNHDR 124
Query: 61 SDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 107
T + +L + Y +L+ FGVP +R R + + R ++
Sbjct: 125 GRTFDVIKSVLEDLGYKVFYKVLNSKNFGVPQNRERIYIVGFRNDIA 171
Score = 40.8 bits (94), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 255 SSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQ 314
S+ ++++R TPRE A L FP +F+F ++ Y GNS+++ V+ + + + AQ
Sbjct: 266 GSVNKEYIRKMTPREWARLQGFPDNFKFV--VADTHLYKQFGNSVTVPVIRAIAEKIKAQ 323
>gi|125974232|ref|YP_001038142.1| DNA-cytosine methyltransferase [Clostridium thermocellum ATCC
27405]
gi|125714457|gb|ABN52949.1| DNA-cytosine methyltransferase [Clostridium thermocellum ATCC
27405]
Length = 483
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 5/111 (4%)
Query: 4 AHAWLLSPPCQPYTRQGLQKQSSDARAFSFLKILELIP---HTVKPPHMLF--VENVVGF 58
A W PCQ + G Q+ R+ + +I++LI KP ++L V+N++
Sbjct: 64 ADIWCFGFPCQDISVAGKQRGIRGKRSGLYFRIIDLIKGKEEKDKPSYLLIENVKNLLSI 123
Query: 59 ETSDTHAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 109
A ++ L + Y +L+ FGVP +R R F A + R
Sbjct: 124 NNGWDFAAVLSELDEAGYDAFWQVLNSKDFGVPQNRERVFITANLRSRGRR 174
>gi|398345731|ref|ZP_10530434.1| DNA-methyltransferase (dcm) [Leptospira broomii str. 5399]
Length = 420
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVK--PPHMLFVENV---VGFETSDTHAK 66
PCQP+++ G QK + + + E + +K P +F+ENV V T
Sbjct: 69 PCQPFSKAGFQKGFNCP---DYGDLFEYVYKIIKFHNPKFVFLENVPNIVKHNNGKTWKT 125
Query: 67 MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRK 104
+++ L N Y +LSP +G+P R R + + +K
Sbjct: 126 IVDKLENIGYNINHNVLSPHFYGIPQIRERVYIICTKK 163
>gi|262402827|ref|ZP_06079388.1| type II restriction-modification system methylation subunit [Vibrio
sp. RC586]
gi|262351609|gb|EEZ00742.1| type II restriction-modification system methylation subunit [Vibrio
sp. RC586]
Length = 341
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 16/123 (13%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETS--DTHAKMIE 69
PCQP++ G +K D R F +++++ K P ++ ENV GF +S D M E
Sbjct: 80 PCQPFSSAGNRKSMDDHRGGLFESVMDIVDK--KKPKVVLFENVRGFISSKDDKGVLMPE 137
Query: 70 ILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLL 125
+ N Y T +L F VP +R R + R ++ NN P P++
Sbjct: 138 RIKNELLTHGYHTYWKLLKASDFEVPQNRHRVIIVGVRHDVN------NNYTF--PEPII 189
Query: 126 GND 128
+D
Sbjct: 190 SSD 192
Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 9/76 (11%)
Query: 240 GSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSL 299
G++ A P+N G L+ R ++ RE+A SFP DF+F S+ +Y ++GN+
Sbjct: 269 GTITAAATPENSGILHPLEN---RRYSVREIARFQSFPDDFKFI-GTSIPSKYKMIGNA- 323
Query: 300 SIAVVAPLLQYLFAQA 315
V P L Y A++
Sbjct: 324 ----VPPKLAYHIAKS 335
>gi|402298514|ref|ZP_10818199.1| DNA-cytosine methyltransferase [Bacillus alcalophilus ATCC 27647]
gi|401726291|gb|EJS99529.1| DNA-cytosine methyltransferase [Bacillus alcalophilus ATCC 27647]
Length = 364
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 6/101 (5%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHA---- 65
PPC ++ G K + LI +T P+ +ENV G + H
Sbjct: 87 GPPCPDFSVGGKNKGHQGENGKLTETFVNLICNT--RPNFFVIENVKGLVKTKKHKEFFD 144
Query: 66 KMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPL 106
+MI +L +S Y +L+ L GVP R R F L K +
Sbjct: 145 RMIGLLEDSGYAVDFKVLNALDLGVPQDRERIFILGVTKTI 185
>gi|347533667|ref|YP_004842380.1| DNA methylase C-5 cytosine-specific family protein [Sphingobium
chungbukense]
gi|345452348|gb|AEN94388.1| DNA methylase C-5 cytosine-specific family protein [Sphingobium
chungbukense]
Length = 389
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 121/324 (37%), Gaps = 61/324 (18%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIE 69
PPCQ Y+ Q+ +D RA F + L ++ P + +ENV G + + E
Sbjct: 83 GPPCQGYSVYNHQRGVNDPRAGLFREYLRIVKGI--QPRWIVMENVTGITSIGGGGIVHE 140
Query: 70 I---LANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR--KPLSFRCQLLNNQLLR----- 119
I + + Y +L ++GVP R R F +A R P+ F Q LL
Sbjct: 141 IFEGMKSLGYRVDMKVLRAEEYGVPQERRRVFFIATRTDAPILFPEQTHGPGLLPFVTVW 200
Query: 120 ---SPSPLLGNDDMTVITKHDQ-PDDSWDKLLES-CDPVERFLEFSNSGDQVNTE-TGFL 173
S P L N D + + P +S+ LL C V+ ++ ++N E +
Sbjct: 201 DAISDLPKLENGDRAGPRPYGKRPQNSYQALLRGDCTIVQN--HSASRLSRINQERMRHI 258
Query: 174 STGTAAVDDFGAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSK--RCCCFTKS 231
G + D + ID + L +R P C TK
Sbjct: 259 PAGGSWRD--------------IPIDLLPAGMKLAKRSDHTKRYGRPKKTDLSCTVLTKC 304
Query: 232 YYRYVKGTGSLLATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQR 291
+ G+ + VQ R FT RE A L SFP F F + + ++
Sbjct: 305 DVHW----GAYIHPVQD--------------RSFTVREAARLQSFPDFFTFKGNST--EQ 344
Query: 292 YALLGNSLSIAVVAPLLQYLFAQA 315
Y +GN+ V PLL A+A
Sbjct: 345 YVQVGNA-----VPPLLGKCVAEA 363
>gi|403729024|ref|ZP_10948382.1| putative modification methylase [Gordonia rhizosphera NBRC 16068]
gi|403203148|dbj|GAB92713.1| putative modification methylase [Gordonia rhizosphera NBRC 16068]
Length = 422
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHA---KMI 68
PC P++ G Q +SD R F +E + TVKP L +ENV G T A +++
Sbjct: 84 PCPPFSIAGQQLGASDERDL-FAWAVEQVA-TVKP-RALMLENVRGLSTPRFAAYRQRIL 140
Query: 69 EILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 103
+ L Y +L+ FGVP RPR+ +A R
Sbjct: 141 DRLGKLGYEPFWKLLNACDFGVPQLRPRFVLVALR 175
>gi|422883901|ref|ZP_16930350.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus
sanguinis SK49]
gi|332361999|gb|EGJ39801.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus
sanguinis SK49]
Length = 480
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 49/127 (38%), Gaps = 17/127 (13%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G + D R F +I P LF+ENV G D IL
Sbjct: 104 PCQAFSIAGRRLGFEDTRGTLFFEIARAAKQI--QPRFLFLENVKGLLNHDKGRTFTTIL 161
Query: 72 ANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRK--------PLSFRCQLLNNQLLRS 120
D L + +L+ FGVP +R R F + + P Q N++ L+
Sbjct: 162 TTLDELGFDVEWQVLNSKDFGVPQNRERVFIIGHSRKKGTRLLFPFRREGQATNSETLKE 221
Query: 121 PSPLLGN 127
LGN
Sbjct: 222 ----LGN 224
>gi|334345632|ref|YP_004554184.1| DNA-cytosine methyltransferase [Sphingobium chlorophenolicum L-1]
gi|334102254|gb|AEG49678.1| DNA-cytosine methyltransferase [Sphingobium chlorophenolicum L-1]
Length = 368
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQP++ ++S D R ++ L+ E + VK P ++ +ENV G + + L
Sbjct: 91 PCQPFSTYSQSRKSKDDR-WTLLREFERLAVDVK-PEIVTMENVPGLANQSVWKEFVAAL 148
Query: 72 ANSDYLTQEFILSPLQFGVPYSRPRYFCLAKR 103
Y ++ +GVP SR R LA +
Sbjct: 149 RGEGYKVWWSEIACDDYGVPQSRRRLVLLASK 180
>gi|111656823|ref|ZP_01407675.1| hypothetical protein SpneT_02001911 [Streptococcus pneumoniae
TIGR4]
gi|148994722|ref|ZP_01823806.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus
pneumoniae SP9-BS68]
gi|148999034|ref|ZP_01826467.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus
pneumoniae SP11-BS70]
gi|307067986|ref|YP_003876952.1| site-specific DNA methylase [Streptococcus pneumoniae AP200]
gi|417677069|ref|ZP_12326478.1| modification methylase HpaII [Streptococcus pneumoniae GA17545]
gi|417696524|ref|ZP_12345703.1| modification methylase HpaII [Streptococcus pneumoniae GA47368]
gi|417698736|ref|ZP_12347908.1| modification methylase HpaII [Streptococcus pneumoniae GA41317]
gi|418088405|ref|ZP_12725570.1| DNA-cytosine methyltransferase family protein [Streptococcus
pneumoniae GA47033]
gi|418107767|ref|ZP_12744805.1| DNA-cytosine methyltransferase family protein [Streptococcus
pneumoniae GA41410]
gi|418130494|ref|ZP_12767377.1| DNA-cytosine methyltransferase family protein [Streptococcus
pneumoniae GA07643]
gi|418155325|ref|ZP_12792054.1| modification methylase HpaII [Streptococcus pneumoniae GA16242]
gi|418169357|ref|ZP_12806000.1| modification methylase HpaII [Streptococcus pneumoniae GA19077]
gi|418176149|ref|ZP_12812743.1| modification methylase HpaII [Streptococcus pneumoniae GA41437]
gi|418219076|ref|ZP_12845742.1| DNA-cytosine methyltransferase family protein [Streptococcus
pneumoniae NP127]
gi|418221387|ref|ZP_12848040.1| DNA-cytosine methyltransferase family protein [Streptococcus
pneumoniae GA47751]
gi|418225724|ref|ZP_12852352.1| DNA-cytosine methyltransferase family protein [Streptococcus
pneumoniae NP112]
gi|419423276|ref|ZP_13963490.1| DNA (cytosine-5-)-methyltransferase family protein [Streptococcus
pneumoniae GA43264]
gi|419455031|ref|ZP_13994991.1| DNA (cytosine-5-)-methyltransferase family protein [Streptococcus
pneumoniae EU-NP04]
gi|419477991|ref|ZP_14017815.1| DNA (cytosine-5-)-methyltransferase family protein [Streptococcus
pneumoniae GA18068]
gi|419497711|ref|ZP_14037419.1| DNA (cytosine-5-)-methyltransferase family protein [Streptococcus
pneumoniae GA47522]
gi|419506246|ref|ZP_14045907.1| DNA (cytosine-5-)-methyltransferase family protein [Streptococcus
pneumoniae GA49194]
gi|421247591|ref|ZP_15704077.1| modification methylase SPRI [Streptococcus pneumoniae 2082170]
gi|147755157|gb|EDK62211.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus
pneumoniae SP11-BS70]
gi|147927053|gb|EDK78094.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus
pneumoniae SP9-BS68]
gi|306409523|gb|ADM84950.1| Site-specific DNA methylase [Streptococcus pneumoniae AP200]
gi|332074668|gb|EGI85142.1| modification methylase HpaII [Streptococcus pneumoniae GA17545]
gi|332200781|gb|EGJ14853.1| modification methylase HpaII [Streptococcus pneumoniae GA41317]
gi|332201799|gb|EGJ15869.1| modification methylase HpaII [Streptococcus pneumoniae GA47368]
gi|353756082|gb|EHD36685.1| DNA-cytosine methyltransferase family protein [Streptococcus
pneumoniae GA47033]
gi|353779950|gb|EHD60414.1| DNA-cytosine methyltransferase family protein [Streptococcus
pneumoniae GA41410]
gi|353801818|gb|EHD82118.1| DNA-cytosine methyltransferase family protein [Streptococcus
pneumoniae GA07643]
gi|353820703|gb|EHE00886.1| modification methylase HpaII [Streptococcus pneumoniae GA16242]
gi|353834542|gb|EHE14643.1| modification methylase HpaII [Streptococcus pneumoniae GA19077]
gi|353841588|gb|EHE21643.1| modification methylase HpaII [Streptococcus pneumoniae GA41437]
gi|353874212|gb|EHE54068.1| DNA-cytosine methyltransferase family protein [Streptococcus
pneumoniae NP127]
gi|353874697|gb|EHE54551.1| DNA-cytosine methyltransferase family protein [Streptococcus
pneumoniae GA47751]
gi|353880921|gb|EHE60735.1| DNA-cytosine methyltransferase family protein [Streptococcus
pneumoniae NP112]
gi|379565427|gb|EHZ30419.1| DNA (cytosine-5-)-methyltransferase family protein [Streptococcus
pneumoniae GA18068]
gi|379586440|gb|EHZ51292.1| DNA (cytosine-5-)-methyltransferase family protein [Streptococcus
pneumoniae GA43264]
gi|379599975|gb|EHZ64757.1| DNA (cytosine-5-)-methyltransferase family protein [Streptococcus
pneumoniae GA47522]
gi|379608160|gb|EHZ72906.1| DNA (cytosine-5-)-methyltransferase family protein [Streptococcus
pneumoniae GA49194]
gi|379629488|gb|EHZ94082.1| DNA (cytosine-5-)-methyltransferase family protein [Streptococcus
pneumoniae EU-NP04]
gi|395614412|gb|EJG74433.1| modification methylase SPRI [Streptococcus pneumoniae 2082170]
Length = 392
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 50/127 (39%), Gaps = 17/127 (13%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G + D R F +I P LF+ENV G D IL
Sbjct: 62 PCQAFSIAGRRLGFEDTRGTLFFEIARAAKQI--QPRFLFLENVKGLLNHDKGRTFTTIL 119
Query: 72 ANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRK--------PLSFRCQLLNNQLLRS 120
D L + +L+ FGVP +R R F + + P Q N++ L++
Sbjct: 120 TTLDELGFDVEWQVLNSKDFGVPKNRERVFIIGHSRKKGTRLLFPFRREGQATNSETLKA 179
Query: 121 PSPLLGN 127
LGN
Sbjct: 180 ----LGN 182
>gi|419526070|ref|ZP_14065632.1| DNA (cytosine-5-)-methyltransferase family protein [Streptococcus
pneumoniae GA14373]
gi|421270759|ref|ZP_15721614.1| DNA (cytosine-5-)-methyltransferase family protein [Streptococcus
pneumoniae SPAR48]
gi|421272911|ref|ZP_15723753.1| DNA (cytosine-5-)-methyltransferase family protein [Streptococcus
pneumoniae SPAR55]
gi|421309745|ref|ZP_15760372.1| cytosine-specific methyltransferase [Streptococcus pneumoniae
GA62681]
gi|421313694|ref|ZP_15764284.1| cytosine-specific methyltransferase [Streptococcus pneumoniae
GA47562]
gi|379558330|gb|EHZ23366.1| DNA (cytosine-5-)-methyltransferase family protein [Streptococcus
pneumoniae GA14373]
gi|395867888|gb|EJG79008.1| DNA (cytosine-5-)-methyltransferase family protein [Streptococcus
pneumoniae SPAR48]
gi|395874565|gb|EJG85648.1| DNA (cytosine-5-)-methyltransferase family protein [Streptococcus
pneumoniae SPAR55]
gi|395911166|gb|EJH22035.1| cytosine-specific methyltransferase [Streptococcus pneumoniae
GA62681]
gi|395914194|gb|EJH25038.1| cytosine-specific methyltransferase [Streptococcus pneumoniae
GA47562]
Length = 390
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 50/127 (39%), Gaps = 17/127 (13%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G + D R F +I P LF+ENV G D IL
Sbjct: 60 PCQAFSIAGRRLGFEDTRGTLFFEIARAAKQI--QPRFLFLENVKGLLNHDKGRTFTTIL 117
Query: 72 ANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRK--------PLSFRCQLLNNQLLRS 120
D L + +L+ FGVP +R R F + + P Q N++ L++
Sbjct: 118 TTLDELGFDVEWQVLNSKDFGVPKNRERVFIIGHSRKKGTRLLFPFRREGQATNSETLKA 177
Query: 121 PSPLLGN 127
LGN
Sbjct: 178 ----LGN 180
>gi|334120434|ref|ZP_08494514.1| DNA-cytosine methyltransferase [Microcoleus vaginatus FGP-2]
gi|333456412|gb|EGK85044.1| DNA-cytosine methyltransferase [Microcoleus vaginatus FGP-2]
Length = 330
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 5/102 (4%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIE 69
PPCQ ++ G ++ D+R F + + ++ K P ENV G
Sbjct: 73 GPPCQSWSEAGAKRGIDDSRGQLFWEYIRIVRD--KQPVFFLAENVSGILAPRNKEAFTY 130
Query: 70 ILANSD---YLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 108
IL+ + Y +L+ FGVP R R + R+ L F
Sbjct: 131 ILSQFEEIGYRVSYKLLNAKNFGVPQDRQRVIVVGYRETLGF 172
>gi|428311071|ref|YP_007122048.1| DNA-methyltransferase Dcm [Microcoleus sp. PCC 7113]
gi|428252683|gb|AFZ18642.1| DNA-methyltransferase Dcm [Microcoleus sp. PCC 7113]
Length = 341
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 5/94 (5%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG--FETSDTHAKM 67
PPCQP++ G Q D+R F ++ + P + ENV G F ++
Sbjct: 95 GPPCQPFSVNGHQLGLQDSRD-GFPIFIDAVDRYR--PKIALFENVRGMLFRNKAYFEEI 151
Query: 68 IEILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
+ L Y+ + IL+ +GVP R R FC+A
Sbjct: 152 VIALKELGYIVEWNILNAAHYGVPQRRERLFCVA 185
>gi|390936031|ref|YP_006393590.1| modification methylase [Bifidobacterium bifidum BGN4]
gi|389889644|gb|AFL03711.1| modification methylase [Bifidobacterium bifidum BGN4]
Length = 322
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIE 69
PPCQ ++ G +K+ ARA K ++ H P +ENV +T+ +E
Sbjct: 95 GPPCQDFSSAGKRKEG--ARADLTEKYATIVAHFR--PSFFVMENVARAKTATAFRHAVE 150
Query: 70 ILANSDYLTQEFILSPLQFGVPYSRPRYFCLA 101
IL + Y E +L+ GVP +R R +
Sbjct: 151 ILTEAGYGITEHVLNAAYCGVPQARKRLITVG 182
>gi|386748106|ref|YP_006221314.1| DNA-cytosine methyltransferase [Helicobacter cetorum MIT 99-5656]
gi|384554348|gb|AFI06104.1| DNA-cytosine methyltransferase [Helicobacter cetorum MIT 99-5656]
Length = 418
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 43/103 (41%), Gaps = 5/103 (4%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGF---ETSDTHAK 66
PCQ ++ G Q+ D R F + LI P + ENV G +T
Sbjct: 172 GSPCQSFSLVGKQRGLEDTRGTLFYEYARLIKEI--QPKVFIYENVKGLLSHNRGETFKI 229
Query: 67 MIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFR 109
M ++ Y + +L+ +G+P +R R F + RK L +
Sbjct: 230 MEQVFDALGYTRYKAVLNAKDYGIPQNRERLFVVGFRKDLGVK 272
>gi|418121438|ref|ZP_12758381.1| modification methylase HpaII [Streptococcus pneumoniae GA44194]
gi|419491282|ref|ZP_14031020.1| modification methylase HpaII [Streptococcus pneumoniae GA47179]
gi|419532586|ref|ZP_14072101.1| DNA (cytosine-5-)-methyltransferase family protein [Streptococcus
pneumoniae GA47794]
gi|421275098|ref|ZP_15725927.1| modification methylase HpaII [Streptococcus pneumoniae GA52612]
gi|353792274|gb|EHD72646.1| modification methylase HpaII [Streptococcus pneumoniae GA44194]
gi|379592644|gb|EHZ57459.1| modification methylase HpaII [Streptococcus pneumoniae GA47179]
gi|379605106|gb|EHZ69857.1| DNA (cytosine-5-)-methyltransferase family protein [Streptococcus
pneumoniae GA47794]
gi|395873062|gb|EJG84154.1| modification methylase HpaII [Streptococcus pneumoniae GA52612]
Length = 452
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 50/127 (39%), Gaps = 17/127 (13%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G + D R F +I P LF+ENV G D IL
Sbjct: 76 PCQAFSIAGRRLGFEDIRGTLFFEIARAAKQI--QPRFLFLENVKGLLNHDKGRTFTTIL 133
Query: 72 ANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRK--------PLSFRCQLLNNQLLRS 120
D L + +L+ FGVP +R R F + + P Q N++ L++
Sbjct: 134 TTLDELGFDVEWQVLNSKDFGVPQNRERVFIIGHSRKKGTRLLFPFRREGQATNSETLKT 193
Query: 121 PSPLLGN 127
LGN
Sbjct: 194 ----LGN 196
>gi|335044409|ref|ZP_08537434.1| site-specific DNA methylase [Methylophaga aminisulfidivorans MP]
gi|333787655|gb|EGL53539.1| site-specific DNA methylase [Methylophaga aminisulfidivorans MP]
Length = 420
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 61/154 (39%), Gaps = 36/154 (23%)
Query: 5 HAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD- 62
H LL+ PCQP++ GL+ D R F I ++ K P +ENV G + D
Sbjct: 156 HDVLLAGFPCQPFSHAGLKLGIEDTRGTLFHDIANIL--ETKKPKFALLENVKGLISHDK 213
Query: 63 --THAKMIEILANSDY-------------------LTQEFILSPLQFGVPYSRPRYFCLA 101
T +++ L Y L +E +L + FG+P +R R + +
Sbjct: 214 GYTLKVILKTLTKMGYSCNIPKSVIEHGSTKEIQALAKEMVLKSVDFGIPQNRQRIYIVL 273
Query: 102 KR----------KPLSFRCQLLNNQLLRSPSPLL 125
R KPL + + + L +P P L
Sbjct: 274 WRDGEVKSFEYPKPLGIEVK-VGDMLEENPDPKL 306
>gi|194396841|ref|YP_002037999.1| Tn5253 C-5 cytosine-specific DNA methylase [Streptococcus
pneumoniae G54]
gi|194356508|gb|ACF54956.1| Tn5253 C-5 cytosine-specific DNA methylase [Streptococcus
pneumoniae G54]
Length = 452
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 50/127 (39%), Gaps = 17/127 (13%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G + D R F +I P LF+ENV G D IL
Sbjct: 76 PCQAFSIAGRRLGFEDIRGTLFFEIARAAKQI--QPRFLFLENVKGLLNHDKGRTFTTIL 133
Query: 72 ANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRK--------PLSFRCQLLNNQLLRS 120
D L + +L+ FGVP +R R F + + P Q N++ L++
Sbjct: 134 TTLDELGFDVEWQVLNSKDFGVPQNRERVFIIGHSRKKGTRLLFPFRREGQATNSETLKT 193
Query: 121 PSPLLGN 127
LGN
Sbjct: 194 ----LGN 196
>gi|383812432|ref|ZP_09967870.1| putative modification methylase HpaII [Prevotella sp. oral taxon
306 str. F0472]
gi|383354992|gb|EID32538.1| putative modification methylase HpaII [Prevotella sp. oral taxon
306 str. F0472]
Length = 371
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 6/103 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSD---THAKMI 68
PCQ ++ G + DAR F ++ + P + ENV G T D T +
Sbjct: 105 PCQAFSYAGNKAGFEDARGTLFFELARAVKEV--KPKVFMGENVRGLYTHDHGHTFEVIK 162
Query: 69 EILANSDY-LTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRC 110
++A+ Y L + IL +Q+ VP R R +A R L+ R
Sbjct: 163 SVIADLGYTLVEPQILKAIQYQVPQKRERLILIAIRNDLANRV 205
>gi|12229856|sp|P94147.1|MTA1_RUEGE RecName: Full=Modification methylase AgeI; Short=M.AgeI; AltName:
Full=Cytosine-specific methyltransferase AgeI
gi|8037880|gb|AAF71525.1|AF247972_2 AgeI methylase [Thalassobius gelatinovorus]
gi|1695647|dbj|BAA11333.1| ageI metylase [Thalassobius gelatinovorus]
gi|1588637|prf||2209243A AgeI methylase
Length = 429
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 54/133 (40%), Gaps = 16/133 (12%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIE 69
PPCQ ++ G Q++ DAR ++ + P +ENVVG + A + +
Sbjct: 77 GPPCQGFSTYG-QRRDDDARNQLYVPYFGFVEEFR--PKAFLIENVVGLLSMSGGAVLAD 133
Query: 70 ILANSD---YLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSPLLG 126
++A ++ Y L ++GVP R R F + Q + P P
Sbjct: 134 MVARAEALGYAADVVTLDACEYGVPQHRRRVFIFGA----------ADGQRIDPPQPSHV 183
Query: 127 NDDMTVITKHDQP 139
N + + +DQP
Sbjct: 184 NGKRSGVVLNDQP 196
>gi|307244197|ref|ZP_07526312.1| DNA (cytosine-5-)-methyltransferase [Peptostreptococcus stomatis
DSM 17678]
gi|306492347|gb|EFM64385.1| DNA (cytosine-5-)-methyltransferase [Peptostreptococcus stomatis
DSM 17678]
Length = 534
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 8/102 (7%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVG-FETSDTHAK-MIE 69
PCQP++ G ++ +D+R + + L +I K P ++ ENV G T D + +IE
Sbjct: 264 PCQPFSNAGNRRGVNDSRGNLYKECLRVINE--KHPKVVVFENVRGLLSTKDENGNPLIE 321
Query: 70 ILANS----DYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 107
+ ++ Y T +++ +GVP +R R +A RK L+
Sbjct: 322 TIISNLYELGYKTTYKLVNASSYGVPQNRIRVIVVAFRKDLN 363
>gi|182684309|ref|YP_001836056.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus
pneumoniae CGSP14]
gi|221232093|ref|YP_002511246.1| DNA methylase [Streptococcus pneumoniae ATCC 700669]
gi|415699230|ref|ZP_11457500.1| modification methylase Rho11sI [Streptococcus pneumoniae 459-5]
gi|415749774|ref|ZP_11477718.1| modification methylase Rho11sI [Streptococcus pneumoniae SV35]
gi|415752463|ref|ZP_11479574.1| modification methylase Rho11sI [Streptococcus pneumoniae SV36]
gi|418123683|ref|ZP_12760615.1| modification methylase HpaII [Streptococcus pneumoniae GA44378]
gi|418128226|ref|ZP_12765120.1| modification methylase HpaII [Streptococcus pneumoniae NP170]
gi|418137414|ref|ZP_12774253.1| modification methylase HpaII [Streptococcus pneumoniae GA11663]
gi|418178404|ref|ZP_12814987.1| modification methylase HpaII [Streptococcus pneumoniae GA41565]
gi|419473417|ref|ZP_14013267.1| modification methylase HpaII [Streptococcus pneumoniae GA13430]
gi|182629643|gb|ACB90591.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus
pneumoniae CGSP14]
gi|220674554|emb|CAR69117.1| putative DNA methylase [Streptococcus pneumoniae ATCC 700669]
gi|353796344|gb|EHD76687.1| modification methylase HpaII [Streptococcus pneumoniae GA44378]
gi|353799224|gb|EHD79544.1| modification methylase HpaII [Streptococcus pneumoniae NP170]
gi|353842463|gb|EHE22509.1| modification methylase HpaII [Streptococcus pneumoniae GA41565]
gi|353900971|gb|EHE76519.1| modification methylase HpaII [Streptococcus pneumoniae GA11663]
gi|379551771|gb|EHZ16864.1| modification methylase HpaII [Streptococcus pneumoniae GA13430]
gi|381310159|gb|EIC50992.1| modification methylase Rho11sI [Streptococcus pneumoniae SV36]
gi|381316028|gb|EIC56783.1| modification methylase Rho11sI [Streptococcus pneumoniae 459-5]
gi|381318068|gb|EIC58793.1| modification methylase Rho11sI [Streptococcus pneumoniae SV35]
Length = 452
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 50/127 (39%), Gaps = 17/127 (13%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ G + D R F +I P LF+ENV G D IL
Sbjct: 76 PCQAFSIAGRRLGFEDIRGTLFFEIARAAKQI--QPRFLFLENVKGLLNHDKGRTFTTIL 133
Query: 72 ANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRKPLSFRC--------QLLNNQLLRS 120
D L + +L+ FGVP +R R F + + R Q N++ L++
Sbjct: 134 TTLDELGFDVEWQVLNSKDFGVPQNRERVFIIGHSRKKGIRLLFPFRREGQATNSETLKT 193
Query: 121 PSPLLGN 127
LGN
Sbjct: 194 ----LGN 196
>gi|319639602|ref|ZP_07994349.1| cytosine-specific methyltransferase [Neisseria mucosa C102]
gi|317399173|gb|EFV79847.1| cytosine-specific methyltransferase [Neisseria mucosa C102]
Length = 327
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 5/99 (5%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIEIL 71
PCQ ++ K ++DARA + ++++++ T +P + +F ENV G T + ++L
Sbjct: 85 PCQSFSTVNPSKDTNDARANLYKELVKVL-QTKQPKYFIF-ENVKGLMTLQKGKILQKVL 142
Query: 72 A---NSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLS 107
+ Y Q +L FG+P R R F + RK +
Sbjct: 143 TEFKQAGYEVQYKLLLAANFGIPQKRERVFMVGVRKDIQ 181
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 7/53 (13%)
Query: 263 RYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAVVAPLLQYLFAQA 315
R FTPRE A + SFP FQFP +S Q Y +GN+ + P+L + A A
Sbjct: 277 RRFTPREAAGIQSFPDTFQFP--VSDIQAYRQIGNA-----IPPVLMWHVANA 322
>gi|434384967|ref|YP_007095578.1| DNA-methyltransferase Dcm [Chamaesiphon minutus PCC 6605]
gi|428015957|gb|AFY92051.1| DNA-methyltransferase Dcm [Chamaesiphon minutus PCC 6605]
Length = 318
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 6/108 (5%)
Query: 5 HAWLLSP-PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDT 63
H LL+ PCQP++ G +D R F I E++ K P+ +ENV + D
Sbjct: 63 HDILLAGFPCQPFSIIGKSLGFADTRGTLFFNIEEILRR--KQPYAFMLENVKQLRSHDR 120
Query: 64 HAKMIEI---LANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSF 108
++ I L Y +L+ L FG+P R R + ++ L F
Sbjct: 121 GRTLLVIKQKLEALGYFIYITVLNALDFGLPQKRERIIIVGFKEDLEF 168
>gi|387907797|ref|YP_006338131.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori XZ274]
gi|387572732|gb|AFJ81440.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori XZ274]
Length = 352
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 115/312 (36%), Gaps = 45/312 (14%)
Query: 8 LLSPPCQPYTRQGLQKQSSDARAFS-FLKILELIPHTVKPPHMLFVENVVGF---ETSDT 63
L PPCQ Y+ G +K A F +L++L+L+ P + ENVVG +
Sbjct: 71 LGGPPCQSYSTLGKRKMDEKANLFKEYLRLLDLV-----KPKIFVFENVVGLMSMQKGQL 125
Query: 64 HAKMIEILANSDYLTQEFILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLLNNQLLRSPSP 123
++ Y+ + IL+ L +GV R R + K SF+ Q P P
Sbjct: 126 FKQICNAFKERGYILEHAILNALDYGVTQIRERVILVGVLK--SFK------QKFHFPKP 177
Query: 124 LLGNDDMTVITKHDQPDDSWDKLLESCDPVERFLEFSNSGDQVNTETGFLSTGTAAVDDF 183
I H D+ L P++ SGD + G+L +F
Sbjct: 178 ---------IKTHFSLKDA----LGDLPPIQS----GESGDAL----GYLKNADNVFLEF 216
Query: 184 GAAEETVEVDRCVSIDHFLVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLL 243
+ + + L+ + + G + D + + +T +Y + +
Sbjct: 217 VRNSKELSEHSSPKNNEKLIKIMQTLKDGQSKDDLPKHLRPKSGYTNTYAKMWWEKPAPT 276
Query: 244 ATVQPKNKGKASSLKEQHLRYFTPREVANLHSFPGDFQFPHHLSLRQRYALLGNSLSIAV 303
T + + + R + RE A L SFP +++F S ++ +GN+
Sbjct: 277 ITRNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFCGSASAKR--LQIGNA----- 329
Query: 304 VAPLLQYLFAQA 315
V PLL A A
Sbjct: 330 VPPLLSVALAHA 341
>gi|296114087|ref|YP_003628025.1| cytosine-specific methyltransferase [Moraxella catarrhalis RH4]
gi|416230549|ref|ZP_11628473.1| cytosine-specific methyltransferase [Moraxella catarrhalis 46P47B1]
gi|421779019|ref|ZP_16215514.1| cytosine-specific methyltransferase [Moraxella catarrhalis RH4]
gi|295921781|gb|ADG62132.1| cytosine-specific methyltransferase [Moraxella catarrhalis BBH18]
gi|326560672|gb|EGE11040.1| cytosine-specific methyltransferase [Moraxella catarrhalis 46P47B1]
gi|407813797|gb|EKF84576.1| cytosine-specific methyltransferase [Moraxella catarrhalis RH4]
Length = 318
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Query: 12 PCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENV---VGFETSDTHAKMI 68
PCQ ++ G QK SD+R F I ++I P ++F+ENV + DT ++
Sbjct: 74 PCQAFSVAGYQKGFSDSRGTLFFDIEKIIEK--HRPKVVFLENVKNLISHNKGDTFKVIL 131
Query: 69 EILANS-DYLTQEFILSPLQFG-VPYSRPRYFCLAKRKPL 106
+IL N +Y +++ ++ +P +R R F +A K +
Sbjct: 132 DILENKLNYQVFYKVMNTSEYANIPQNRERIFIIAFDKNI 171
>gi|386752038|ref|YP_006225257.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Shi169]
gi|384558296|gb|AFH98763.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Shi169]
Length = 353
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 6/107 (5%)
Query: 10 SPPCQPYTRQGLQKQSSDARAFSFLKILELIPHTVKPPHMLFVENVVGFETSDTHAKMIE 69
PPCQ ++ +G D R F FL+ +E++ P + +ENV + + E
Sbjct: 79 GPPCQGFSNKGKNLGLKDPRNFLFLEYIEIVKAI--KPEIFIIENVKNLISCAKGYFLEE 136
Query: 70 ILANSDYLTQEF---ILSPLQFGVPYSRPRYFCLAKRKPLSFRCQLL 113
I + L + IL+ +GVP +R R F + + SF LL
Sbjct: 137 IKEKLNALGYQLSYQILNAKDYGVPQNRERAFIVGASR-FSFDFNLL 182
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.137 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,090,846,470
Number of Sequences: 23463169
Number of extensions: 209863389
Number of successful extensions: 400103
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 262
Number of HSP's successfully gapped in prelim test: 1319
Number of HSP's that attempted gapping in prelim test: 398507
Number of HSP's gapped (non-prelim): 2449
length of query: 316
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 174
effective length of database: 9,027,425,369
effective search space: 1570772014206
effective search space used: 1570772014206
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 76 (33.9 bits)