Query 021171
Match_columns 316
No_of_seqs 199 out of 1413
Neff 6.5
Searched_HMMs 46136
Date Fri Mar 29 08:09:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021171.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021171hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03030 cationic peroxidase; 100.0 5E-106 1E-110 762.5 24.9 306 4-315 3-324 (324)
2 cd00693 secretory_peroxidase H 100.0 1E-98 2E-103 710.9 25.4 290 22-314 1-298 (298)
3 PF00141 peroxidase: Peroxidas 100.0 7.1E-72 1.5E-76 511.5 11.0 226 39-279 1-230 (230)
4 PLN02608 L-ascorbate peroxidas 100.0 1.3E-69 2.8E-74 507.5 22.5 232 36-312 14-257 (289)
5 cd00691 ascorbate_peroxidase A 100.0 1.5E-66 3.3E-71 481.5 20.8 229 34-300 11-251 (253)
6 PLN02364 L-ascorbate peroxidas 100.0 3.9E-65 8.5E-70 470.6 20.6 231 25-300 3-248 (250)
7 cd00692 ligninase Ligninase an 100.0 2.3E-64 5E-69 479.8 22.2 236 35-315 16-287 (328)
8 PLN02879 L-ascorbate peroxidas 100.0 7.4E-64 1.6E-68 461.5 21.2 218 38-300 19-248 (251)
9 cd00314 plant_peroxidase_like 100.0 3.7E-59 7.9E-64 433.2 19.0 224 38-296 2-255 (255)
10 cd00649 catalase_peroxidase_1 100.0 1.5E-56 3.2E-61 432.9 20.6 272 23-305 29-401 (409)
11 TIGR00198 cat_per_HPI catalase 100.0 2.4E-53 5.2E-58 433.8 20.9 269 23-302 39-405 (716)
12 cd08201 plant_peroxidase_like_ 100.0 3.7E-51 8E-56 377.0 12.2 212 45-296 33-264 (264)
13 PRK15061 catalase/hydroperoxid 100.0 6.3E-50 1.4E-54 406.7 20.4 270 23-303 41-412 (726)
14 cd08200 catalase_peroxidase_2 100.0 1.9E-41 4.1E-46 316.2 18.0 222 41-298 17-296 (297)
15 TIGR00198 cat_per_HPI catalase 100.0 1.3E-35 2.9E-40 303.7 17.7 222 37-299 428-710 (716)
16 PRK15061 catalase/hydroperoxid 100.0 2.2E-35 4.7E-40 300.6 18.8 223 41-299 442-722 (726)
17 COG0376 KatG Catalase (peroxid 100.0 1.4E-30 3.1E-35 254.9 15.7 253 38-298 71-416 (730)
18 COG0376 KatG Catalase (peroxid 99.5 9.2E-14 2E-18 137.4 13.3 217 41-298 452-725 (730)
19 PTZ00411 transaldolase-like pr 87.2 3.9 8.5E-05 39.9 9.2 148 117-288 161-327 (333)
20 TIGR00874 talAB transaldolase. 78.7 14 0.0003 35.9 9.1 130 132-286 166-312 (317)
21 PRK12309 transaldolase/EF-hand 78.4 14 0.00031 36.7 9.4 119 117-252 155-292 (391)
22 PRK05269 transaldolase B; Prov 76.7 9.8 0.00021 36.9 7.5 146 117-287 151-313 (318)
23 PRK12346 transaldolase A; Prov 75.1 11 0.00024 36.6 7.3 144 117-287 150-312 (316)
24 cd00957 Transaldolase_TalAB Tr 70.1 11 0.00024 36.5 6.0 141 117-283 149-309 (313)
25 PF11895 DUF3415: Domain of un 54.8 11 0.00023 29.3 2.3 19 282-300 2-20 (80)
26 PRK01362 putative translaldola 29.0 55 0.0012 29.9 3.1 73 96-186 89-163 (214)
27 TIGR00875 fsa_talC_mipB fructo 26.5 44 0.00096 30.4 2.0 72 96-185 89-162 (213)
28 cd00439 Transaldolase Transald 24.0 50 0.0011 30.8 1.9 78 97-184 128-212 (252)
29 PRK01844 hypothetical protein; 23.5 1.9E+02 0.0042 22.0 4.6 29 38-66 24-52 (72)
30 COG3763 Uncharacterized protei 21.4 1.2E+02 0.0025 23.0 3.0 30 37-66 23-52 (71)
No 1
>PLN03030 cationic peroxidase; Provisional
Probab=100.00 E-value=5.3e-106 Score=762.51 Aligned_cols=306 Identities=42% Similarity=0.706 Sum_probs=283.5
Q ss_pred hHHHHHHHHHHHh---hhccCCCCcCccccCCCChHHHHHHHHHHHHHhccchhhhHHHHHhhccCCCCCCceEeccCCC
Q 021171 4 RGIFHVVLILAFA---ATAFSTLSPCYYDKVCPEALPTIKRIVEAAVEKEGRMGASLLRLHFHDCFVQGCDASILLDDTS 80 (316)
Q Consensus 4 ~~~~~~~~~~~~~---~~~~~~l~~~~Y~~sCP~~e~~V~~~v~~~~~~d~~~aa~llRl~FHDc~v~GcDgSill~~~~ 80 (316)
|+++.++++++++ .++.++|+++||++|||++|+||++.|++++.+|++++|++|||+||||||+||||||||+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~L~~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~~- 81 (324)
T PLN03030 3 RFIVILFFLLAMMATTLVQGQGTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGS- 81 (324)
T ss_pred eehhHHHHHHHHHhcccchhccCccchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCCC-
Confidence 4444444444433 223467999999999999999999999999999999999999999999999999999999964
Q ss_pred CCcccccCCCCCCCchhHHHHHHHHHHHhhhCCCCcccHhHHHHHhhhhHHhhcCCCCcccCCCCCCCCCcccccccCCC
Q 021171 81 TIDSEKNAIPNNNSVRGFEVIDLIKKELDKVCKRPVVSCADILAVAARDSVVALGGPTWKVPLGRRDSTTANRTLANNDI 160 (316)
Q Consensus 81 ~~~~E~~~~~N~~~l~g~~~i~~iK~~le~~cp~~~VScADiialAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~l 160 (316)
.+||++++|. ++|||++|+.||+++|++||+ +|||||||+|||||||+++|||.|+|++||||+++|.+.++. +|
T Consensus 82 --~~Ek~a~~N~-~l~Gf~~i~~iK~~~e~~CPg-~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~-~L 156 (324)
T PLN03030 82 --NTEKTALPNL-LLRGYDVIDDAKTQLEAACPG-VVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDAS-NL 156 (324)
T ss_pred --cccccCCCCc-CcchHHHHHHHHHHHHhhCCC-cccHHHHHHHHhhccccccCCCceeeeccccCCCCCCccccc-CC
Confidence 3699999998 999999999999999999999 999999999999999999999999999999999999887775 89
Q ss_pred CCCCCCHHHHHHHHHHcCCCcccchhccCCccccccccccccccccC--------CCCCCHHHHHHHhhcCCCCCCCCCC
Q 021171 161 PSPFLNLTGLISSFRRQGLNETDLVALSGGHTIGFARCSAFRNRIYN--------ATNIDPDFAKERQRTCPSTGGDSNL 232 (316)
Q Consensus 161 P~p~~~~~~l~~~F~~~Gls~~e~VaLsGaHtiG~~hc~~f~~Rl~~--------dp~~d~~~~~~L~~~Cp~~~~~~~~ 232 (316)
|.|+.++++|++.|+++|||.+|||+||||||||++||.+|.+|||| ||+|||.|+.+|++.||..+.....
T Consensus 157 P~p~~~~~~l~~~F~~~Gl~~~DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp~~~~~~~~ 236 (324)
T PLN03030 157 PGFTDSIDVQKQKFAAKGLNTQDLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCPQNGDGSRR 236 (324)
T ss_pred cCCCCCHHHHHHHHHHcCCCHHHheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCCCCCCCCcc
Confidence 99999999999999999999999999999999999999999999995 8999999999999999964333346
Q ss_pred CCCC-CCCCccChHHHHHHhhcCCCcchhhhcccCcchHHHHHHhhhCH----HHHHHHHHHHHHHhhcCCCCCCCCCcc
Q 021171 233 APFD-PTPLTFDGKYFSSLLQKRGLLISDQALFNGGSTDGLVKTYSLNF----KAFSADFANSMIKMGNINVLTGNKGQI 307 (316)
Q Consensus 233 ~~~D-~Tp~~FDN~Yy~~l~~~~glL~SD~~L~~d~~t~~~V~~~A~d~----~~F~~~Fa~Am~Km~~lgv~tg~~Gei 307 (316)
+++| .||.+|||+||+||++++|+|+|||+|+.|++|+++|++||.|+ +.|+++|++||+|||+|+|+||++|||
T Consensus 237 ~~lD~~Tp~~FDn~Yy~nll~~rGlL~SDq~L~~d~~T~~~V~~~A~~~~~~~~~F~~~Fa~AmvKMg~i~VlTG~~GEI 316 (324)
T PLN03030 237 IALDTGSSNRFDASFFSNLKNGRGILESDQKLWTDASTRTFVQRFLGVRGLAGLNFNVEFGRSMVKMSNIGVKTGTNGEI 316 (324)
T ss_pred ccCCCCCCcccccHHHHHHHhcCCCcCCchHhhcCccHHHHHHHHhcccccchhhhHHHHHHHHHHHccCCCCCCCCCce
Confidence 7899 99999999999999999999999999999999999999999875 599999999999999999999999999
Q ss_pred ccccccCC
Q 021171 308 RSNCRRLN 315 (316)
Q Consensus 308 R~~C~~~n 315 (316)
||+|+++|
T Consensus 317 Rk~C~~vN 324 (324)
T PLN03030 317 RKVCSAIN 324 (324)
T ss_pred eccccccC
Confidence 99999998
No 2
>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=1e-98 Score=710.87 Aligned_cols=290 Identities=54% Similarity=0.927 Sum_probs=279.4
Q ss_pred CCCcCccccCCCChHHHHHHHHHHHHHhccchhhhHHHHHhhccCCCCCCceEeccCCCCCcccccCCCCCCCchhHHHH
Q 021171 22 TLSPCYYDKVCPEALPTIKRIVEAAVEKEGRMGASLLRLHFHDCFVQGCDASILLDDTSTIDSEKNAIPNNNSVRGFEVI 101 (316)
Q Consensus 22 ~l~~~~Y~~sCP~~e~~V~~~v~~~~~~d~~~aa~llRl~FHDc~v~GcDgSill~~~~~~~~E~~~~~N~~~l~g~~~i 101 (316)
||+++||++|||++|+||+++|++.+.+|++++|++|||+||||||+||||||||++++++.+|+++++|. +++||++|
T Consensus 1 ~L~~~~Y~~sCP~~e~iV~~~v~~~~~~~~~~a~~~lRl~FHDc~v~GcDaSill~~~~~~~~E~~~~~N~-~l~g~~~i 79 (298)
T cd00693 1 QLSVGFYSKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDSTANNTSEKDAPPNL-SLRGFDVI 79 (298)
T ss_pred CCCcccccCCCCChHHHHHHHHHHHHHhCCCcCchhhhhhhHhhhccCcceeEEecCCCCCchhccCCCCC-CcchhHHH
Confidence 59999999999999999999999999999999999999999999999999999999887778899999999 99999999
Q ss_pred HHHHHHHhhhCCCCcccHhHHHHHhhhhHHhhcCCCCcccCCCCCCCCCcccccccCCCCCCCCCHHHHHHHHHHcCCCc
Q 021171 102 DLIKKELDKVCKRPVVSCADILAVAARDSVVALGGPTWKVPLGRRDSTTANRTLANNDIPSPFLNLTGLISSFRRQGLNE 181 (316)
Q Consensus 102 ~~iK~~le~~cp~~~VScADiialAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gls~ 181 (316)
+.||+++|++||+ +|||||||+||||+||+++|||.|+|++||+|+.++.+..+ +.||+|+.+++++++.|+++||++
T Consensus 80 ~~iK~~~e~~cp~-~VScADiialAar~av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~G~~~ 157 (298)
T cd00693 80 DDIKAALEAACPG-VVSCADILALAARDAVVLAGGPSYEVPLGRRDGRVSSANDV-GNLPSPFFSVSQLISLFASKGLTV 157 (298)
T ss_pred HHHHHHHHhhCCC-cccHHHHHHHhhhhceeccCCCcccccCCCcCCcccCcccc-cCCCCcccCHHHHHHHHHHcCCCH
Confidence 9999999999998 99999999999999999999999999999999998877665 789999999999999999999999
Q ss_pred ccchhccCCccccccccccccccccC-------CCCCCHHHHHHHhhcCCCCCCCCCCCCCC-CCCCccChHHHHHHhhc
Q 021171 182 TDLVALSGGHTIGFARCSAFRNRIYN-------ATNIDPDFAKERQRTCPSTGGDSNLAPFD-PTPLTFDGKYFSSLLQK 253 (316)
Q Consensus 182 ~e~VaLsGaHtiG~~hc~~f~~Rl~~-------dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D-~Tp~~FDN~Yy~~l~~~ 253 (316)
+|||||+||||||++||.+|.+|+|+ ||+|++.|+..|++.||..+.+.+.+++| .||.+|||+||++|+.+
T Consensus 158 ~d~VaL~GaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~~l~~~ 237 (298)
T cd00693 158 TDLVALSGAHTIGRAHCSSFSDRLYNFSGTGDPDPTLDPAYAAQLRKKCPAGGDDDTLVPLDPGTPNTFDNSYYKNLLAG 237 (298)
T ss_pred HHheeecccceeeeeecccccccccCCCCCCCCCCCccHHHHHHhcCCCCCCCCCCccccCCCCCCCccccHHHHHHHhc
Confidence 99999999999999999999999984 89999999999999999754455678999 99999999999999999
Q ss_pred CCCcchhhhcccCcchHHHHHHhhhCHHHHHHHHHHHHHHhhcCCCCCCCCCccccccccC
Q 021171 254 RGLLISDQALFNGGSTDGLVKTYSLNFKAFSADFANSMIKMGNINVLTGNKGQIRSNCRRL 314 (316)
Q Consensus 254 ~glL~SD~~L~~d~~t~~~V~~~A~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~~ 314 (316)
+|+|+||++|+.|++|+++|++||.||+.|+++|++||+||++++|+||.+||||++|++|
T Consensus 238 ~glL~SD~~L~~d~~t~~~V~~~A~d~~~F~~~Fa~Am~Kl~~l~v~tg~~GeiR~~C~~~ 298 (298)
T cd00693 238 RGLLTSDQALLSDPRTRAIVNRYAANQDAFFRDFAAAMVKMGNIGVLTGSQGEIRKNCRVV 298 (298)
T ss_pred ccCccCCHHhccCccHHHHHHHHhhCHHHHHHHHHHHHHHHhhcCCccCCCCccCCccccC
Confidence 9999999999999999999999999999999999999999999999999999999999975
No 3
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Most haem peroxidases follow the reaction scheme: Fe3+ + H2O2 --> [Fe4+=O]R' (Compound I) + H2O [Fe4+=O]R' + substrate --> [Fe4+=O]R (Compound II) + oxidised substrate [Fe4+=O]R + substrate --> Fe3+ + H2O + oxidised substrate In this mechanism, the enzyme reacts with one equivalent of H2O2 to give [Fe4+=O]R' (compound I). This is a two-electron oxidation/reduction reaction where H2O2 is reduced to water and the enzyme is oxidised. One oxidising equivalent resides on iron, giving the oxyferryl [] intermediate, while in many peroxidases the porphyrin (R) is oxidised to the porphyrin pi-cation radical (R'). Compound I then oxidises an organic substrate to give a substrate radical []. Haem peroxidases include two superfamilies: one found in bacteria, fungi, plants and the second found in animals. The first one can be viewed as consisting of 3 major classes []. Class I, the intracellular peroxidases, includes: yeast cytochrome c peroxidase (CCP), a soluble protein found in the mitochondrial electron transport chain, where it probably protects against toxic peroxides; ascorbate peroxidase (AP), the main enzyme responsible for hydrogen peroxide removal in chloroplasts and cytosol of higher plants; and bacterial catalase- peroxidases, exhibiting both peroxidase and catalase activities. It is thought that catalase-peroxidase provides protection to cells under oxidative stress []. Class II consists of secretory fungal peroxidases: ligninases, or lignin peroxidases (LiPs), and manganese-dependent peroxidases (MnPs). These are monomeric glycoproteins involved in the degradation of lignin. In MnP, Mn2+ serves as the reducing substrate []. Class II proteins contain four conserved disulphide bridges and two conserved calcium-binding sites. Class III consists of the secretory plant peroxidases, which have multiple tissue-specific functions: e.g., removal of hydrogen peroxide from chloroplasts and cytosol; oxidation of toxic compounds; biosynthesis of the cell wall; defence responses towards wounding; indole-3-acetic acid (IAA) catabolism; ethylene biosynthesis; and so on. Class III proteins are also monomeric glycoproteins, containing four conserved disulphide bridges and two calcium ions, although the placement of the disulphides differs from class II enzymes. The crystal structures of a number of these proteins show that they share the same architecture - two all-alpha domains between which the haem group is embedded. ; GO: 0004601 peroxidase activity, 0020037 heme binding, 0006979 response to oxidative stress, 0055114 oxidation-reduction process; PDB: 1QPA_B 2DV2_A 2B2R_B 1MWV_B 2FXJ_A 2FXG_A 2B2O_B 1X7U_B 2B2Q_A 2FXH_A ....
Probab=100.00 E-value=7.1e-72 Score=511.45 Aligned_cols=226 Identities=50% Similarity=0.863 Sum_probs=208.8
Q ss_pred HHHHHHHHHHhccchhhhHHHHHhhccCC-CCCCceEeccCCCCCcccccCCCCCCCch-hHHHHHHHHHHHhhhCCCCc
Q 021171 39 IKRIVEAAVEKEGRMGASLLRLHFHDCFV-QGCDASILLDDTSTIDSEKNAIPNNNSVR-GFEVIDLIKKELDKVCKRPV 116 (316)
Q Consensus 39 V~~~v~~~~~~d~~~aa~llRl~FHDc~v-~GcDgSill~~~~~~~~E~~~~~N~~~l~-g~~~i~~iK~~le~~cp~~~ 116 (316)
||++|++++..+++++|+||||+|||||+ +|||||||+. .+|+++++|. +|+ |+++|+.||+++|++||+ +
T Consensus 1 Vr~~v~~~~~~~~~~~~~~lRl~FHDc~~~~GcDgSil~~-----~~e~~~~~N~-gl~~~~~~i~~ik~~~~~~cp~-~ 73 (230)
T PF00141_consen 1 VRSDVRAAFKKDPTLAPGLLRLAFHDCFVYGGCDGSILLF-----SAEKDAPPNR-GLRDGFDVIDPIKAKLEAACPG-V 73 (230)
T ss_dssp HHHHHHHHHHHHTTSHHHHHHHHHHHHTTHTSSSSGGGGS-----TTGGGSGGGT-THHHHHHHHHHHHHHHCHHSTT-T
T ss_pred CHHHHHHHHHHCcCccHHHHHHHccccccccccccceecc-----cccccccccc-CcceeeechhhHHhhhcccccC-C
Confidence 79999999999999999999999999999 9999999983 5799999999 888 999999999999999999 9
Q ss_pred ccHhHHHHHhhhhHHhhcCCCCcccCCCCCCCCCcccccccCCCCCCCCCHHHHHHHHHHcCCCcccchhccCCcccccc
Q 021171 117 VSCADILAVAARDSVVALGGPTWKVPLGRRDSTTANRTLANNDIPSPFLNLTGLISSFRRQGLNETDLVALSGGHTIGFA 196 (316)
Q Consensus 117 VScADiialAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~e~VaLsGaHtiG~~ 196 (316)
|||||||+||||+||+.+|||.|+|++||+|+.++++.++ .+||.|+.++++|++.|+++|||++|||||+||||||++
T Consensus 74 VS~ADiialAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~Gls~~e~VaLsGaHTiG~~ 152 (230)
T PF00141_consen 74 VSCADIIALAARDAVELCGGPRIPVPLGRRDGTVSSPSGA-SNLPSPTDSVDQLLAFFARKGLSAEEMVALSGAHTIGRA 152 (230)
T ss_dssp S-HHHHHHHHHHHHHHHTTGGHSHBEB-EBB-SSGGHHHH-HHSSTTTSHHHHHHHHHHHTT--HHHHHHHHGGGGSTEE
T ss_pred CCHHHHHHHHhhhccccccccccccccccccccccccccc-ccccccccccchhhhhhhccccchhhhcceecccccccc
Confidence 9999999999999999999999999999999999999777 789999999999999999999999999999999999999
Q ss_pred ccccccccccC--CCCCCHHHHHHHhhcCCCCCCCCCCCCCCCCCCccChHHHHHHhhcCCCcchhhhcccCcchHHHHH
Q 021171 197 RCSAFRNRIYN--ATNIDPDFAKERQRTCPSTGGDSNLAPFDPTPLTFDGKYFSSLLQKRGLLISDQALFNGGSTDGLVK 274 (316)
Q Consensus 197 hc~~f~~Rl~~--dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~Tp~~FDN~Yy~~l~~~~glL~SD~~L~~d~~t~~~V~ 274 (316)
||.+|. |+|. ||+||+.|+.. .| .++.+. .+++| ||.+|||+||++|++++|+|.||++|+.|++|+++|+
T Consensus 153 ~c~~f~-rl~~~~dp~~d~~~~~~---~C-~~~~~~-~~~~d-tp~~fDN~Yy~~ll~~~gll~SD~~L~~d~~t~~~V~ 225 (230)
T PF00141_consen 153 HCSSFS-RLYFPPDPTMDPGYAGQ---NC-NSGGDN-GVPLD-TPTVFDNSYYKNLLNGRGLLPSDQALLNDPETRPIVE 225 (230)
T ss_dssp SGGCTG-GTSCSSGTTSTHHHHHH---SS-STSGCT-CEESS-STTS-SSHHHHHHHHTEEEEHHHHHHHHSTTHHHHHH
T ss_pred eecccc-cccccccccccccccee---cc-CCCccc-ccccc-CCCcchhHHHHHHhcCCCcCHHHHHHhcCHHHHHHHH
Confidence 999999 9995 89999999988 99 444343 77889 9999999999999999999999999999999999999
Q ss_pred HhhhC
Q 021171 275 TYSLN 279 (316)
Q Consensus 275 ~~A~d 279 (316)
+||+|
T Consensus 226 ~yA~d 230 (230)
T PF00141_consen 226 RYAQD 230 (230)
T ss_dssp HHHHT
T ss_pred HHhcC
Confidence 99986
No 4
>PLN02608 L-ascorbate peroxidase
Probab=100.00 E-value=1.3e-69 Score=507.54 Aligned_cols=232 Identities=30% Similarity=0.443 Sum_probs=209.8
Q ss_pred HHHHHHHHHHHHHhccchhhhHHHHHhhccC-------CCCCCceEeccCCCCCcccccCCCCCCCc-hhHHHHHHHHHH
Q 021171 36 LPTIKRIVEAAVEKEGRMGASLLRLHFHDCF-------VQGCDASILLDDTSTIDSEKNAIPNNNSV-RGFEVIDLIKKE 107 (316)
Q Consensus 36 e~~V~~~v~~~~~~d~~~aa~llRl~FHDc~-------v~GcDgSill~~~~~~~~E~~~~~N~~~l-~g~~~i~~iK~~ 107 (316)
-+.++++| ..+.+||.++|.+|||+||||+ ++||||||+++ +|+++++|. +| +|+++|+.||++
T Consensus 14 ~~~~~~~~-~~~~~d~~~a~~llRLaFHDc~t~d~~~~~gGcDgSIll~------~E~~~~~N~-gL~~g~~vid~iK~~ 85 (289)
T PLN02608 14 IEKARRDL-RALIASKNCAPIMLRLAWHDAGTYDAKTKTGGPNGSIRNE------EEYSHGANN-GLKIAIDLCEPVKAK 85 (289)
T ss_pred HHHHHHHH-HHHHHCCCcHHHHHHHhhhhcCCcCCCCCCCCCCeeeecc------cccCCcccc-chHHHHHHHHHHHHH
Confidence 35667777 4577899999999999999999 89999999984 599999998 88 599999999998
Q ss_pred HhhhCCCCcccHhHHHHHhhhhHHhhcCCCCcccCCCCCCCCCcccccccCCCCCCCCCHHHHHHHHHHcCCCcccchhc
Q 021171 108 LDKVCKRPVVSCADILAVAARDSVVALGGPTWKVPLGRRDSTTANRTLANNDIPSPFLNLTGLISSFRRQGLNETDLVAL 187 (316)
Q Consensus 108 le~~cp~~~VScADiialAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~e~VaL 187 (316)
+ | +|||||||+||||+||+++|||.|+|++||+|+.++++ +++||+|+.+++++++.|+++|||++|||||
T Consensus 86 ~----~--~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~---~~~LP~p~~~~~~l~~~F~~~Gl~~~D~VaL 156 (289)
T PLN02608 86 H----P--KITYADLYQLAGVVAVEVTGGPTIDFVPGRKDSNACPE---EGRLPDAKKGAKHLRDVFYRMGLSDKDIVAL 156 (289)
T ss_pred c----C--CcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCcCCc---cCCCcCCCCCHHHHHHHHHHcCCCHHHHhhh
Confidence 7 2 89999999999999999999999999999999998863 4689999999999999999999999999999
Q ss_pred cCCccccccccccccccccCCCCCCHHHHHHHhhcCCCCCCCCCCCCCCCCCCccChHHHHHHhhc--CCC--cchhhhc
Q 021171 188 SGGHTIGFARCSAFRNRIYNATNIDPDFAKERQRTCPSTGGDSNLAPFDPTPLTFDGKYFSSLLQK--RGL--LISDQAL 263 (316)
Q Consensus 188 sGaHtiG~~hc~~f~~Rl~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~Tp~~FDN~Yy~~l~~~--~gl--L~SD~~L 263 (316)
+||||||++||. |+ +..+ +++.||.+|||+||++++.+ +|+ |+||++|
T Consensus 157 sGAHTiG~ahc~----r~---------------------g~~g---~~~~Tp~~FDN~Yy~~ll~~~~~gll~L~SD~~L 208 (289)
T PLN02608 157 SGGHTLGRAHPE----RS---------------------GFDG---PWTKEPLKFDNSYFVELLKGESEGLLKLPTDKAL 208 (289)
T ss_pred cccccccccccc----CC---------------------CCCC---CCCCCCCccChHHHHHHHcCCcCCccccccCHhh
Confidence 999999999994 32 0011 23479999999999999998 788 7999999
Q ss_pred ccCcchHHHHHHhhhCHHHHHHHHHHHHHHhhcCCCCCCCCCccccccc
Q 021171 264 FNGGSTDGLVKTYSLNFKAFSADFANSMIKMGNINVLTGNKGQIRSNCR 312 (316)
Q Consensus 264 ~~d~~t~~~V~~~A~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~ 312 (316)
+.|++|+++|++||.|++.|+++|++||+||++|+|+||++||+.+.-+
T Consensus 209 ~~d~~T~~~V~~fA~~~~~F~~~Fa~Am~Km~~lgvltg~~Ge~~~~~~ 257 (289)
T PLN02608 209 LEDPEFRPYVELYAKDEDAFFRDYAESHKKLSELGFTPPSSAFKKKSTS 257 (289)
T ss_pred hcChhHHHHHHHHhhCHHHHHHHHHHHHHHHHcCCCCCCCCCcccccCc
Confidence 9999999999999999999999999999999999999999999987643
No 5
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water.
Probab=100.00 E-value=1.5e-66 Score=481.45 Aligned_cols=229 Identities=27% Similarity=0.411 Sum_probs=207.0
Q ss_pred ChHHHHHHHHHHHHHhccchhhhHHHHHhhccCCCCCCceEeccC---CCCCcccccCCCCCCCc-hhHHHHHHHHHHHh
Q 021171 34 EALPTIKRIVEAAVEKEGRMGASLLRLHFHDCFVQGCDASILLDD---TSTIDSEKNAIPNNNSV-RGFEVIDLIKKELD 109 (316)
Q Consensus 34 ~~e~~V~~~v~~~~~~d~~~aa~llRl~FHDc~v~GcDgSill~~---~~~~~~E~~~~~N~~~l-~g~~~i~~iK~~le 109 (316)
..++||+++|++.+. +++++|.+|||+|||||+ ||+|+++++ +..+.+|+++++|. +| +||++|+.||+++
T Consensus 11 ~~~~~V~~~v~~~~~-~~~~~~~llRl~FHDc~~--~d~s~~~~G~d~s~~~~~E~~~~~N~-~L~~~~~~i~~iK~~~- 85 (253)
T cd00691 11 KDLEAARNDIAKLID-DKNCAPILVRLAWHDSGT--YDKETKTGGSNGTIRFDPELNHGANA-GLDIARKLLEPIKKKY- 85 (253)
T ss_pred HHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHhc--cccccCCCCCCccccchhhcCCcccc-chHHHHHHHHHHHHHc-
Confidence 467899999999999 999999999999999994 777776643 33345799999998 77 8999999999876
Q ss_pred hhCCCCcccHhHHHHHhhhhHHhhcCCCCcccCCCCCCCCCcccccccCCCCCCCCCHHHHHHHHHHcCCCcccchhccC
Q 021171 110 KVCKRPVVSCADILAVAARDSVVALGGPTWKVPLGRRDSTTANRTLANNDIPSPFLNLTGLISSFRRQGLNETDLVALSG 189 (316)
Q Consensus 110 ~~cp~~~VScADiialAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~e~VaLsG 189 (316)
| +|||||||+||||+||+.+|||.|+|++||+|+.++....++.+||.|+.+++++++.|+++|||++|||||+|
T Consensus 86 ---~--~VScADilalAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~d~VaLsG 160 (253)
T cd00691 86 ---P--DISYADLWQLAGVVAIEEMGGPKIPFRPGRVDASDPEECPPEGRLPDASKGADHLRDVFYRMGFNDQEIVALSG 160 (253)
T ss_pred ---C--CCCHHHHHHHHHHHHHHHcCCCccCcccCCCCCCcccccCcccCCCCCCCCHHHHHHHHHhcCCCHHHHHHhcc
Confidence 3 89999999999999999999999999999999999988777889999999999999999999999999999999
Q ss_pred CccccccccccccccccCCCCCCHHHHHHHhhcCCCCCCCCCCCCCCCCCCccChHHHHHHhhcCC--------Ccchhh
Q 021171 190 GHTIGFARCSAFRNRIYNATNIDPDFAKERQRTCPSTGGDSNLAPFDPTPLTFDGKYFSSLLQKRG--------LLISDQ 261 (316)
Q Consensus 190 aHtiG~~hc~~f~~Rl~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~Tp~~FDN~Yy~~l~~~~g--------lL~SD~ 261 (316)
|||||++||..+ . ..+ +++.||.+|||+||++|+.++| +|+||+
T Consensus 161 aHTiG~a~c~~~--~-----------------------~~g---~~~~tp~~FDn~Yy~~ll~~~g~~~~~~~~~L~sD~ 212 (253)
T cd00691 161 AHTLGRCHKERS--G-----------------------YDG---PWTKNPLKFDNSYFKELLEEDWKLPTPGLLMLPTDK 212 (253)
T ss_pred cceeecccccCC--C-----------------------CCC---CCCCCCCcccHHHHHHHhcCCCccCcCcceechhhH
Confidence 999999999531 0 011 1236999999999999999999 999999
Q ss_pred hcccCcchHHHHHHhhhCHHHHHHHHHHHHHHhhcCCCC
Q 021171 262 ALFNGGSTDGLVKTYSLNFKAFSADFANSMIKMGNINVL 300 (316)
Q Consensus 262 ~L~~d~~t~~~V~~~A~d~~~F~~~Fa~Am~Km~~lgv~ 300 (316)
+|+.|++|+++|+.||.|+++|+++|++||+||+++||.
T Consensus 213 ~L~~d~~t~~~v~~~a~~~~~F~~~Fa~Am~Km~~l~v~ 251 (253)
T cd00691 213 ALLEDPKFRPYVELYAKDQDAFFKDYAEAHKKLSELGVP 251 (253)
T ss_pred HHHcCccHHHHHHHHhhCHHHHHHHHHHHHHHHHhcCCC
Confidence 999999999999999999999999999999999999986
No 6
>PLN02364 L-ascorbate peroxidase 1
Probab=100.00 E-value=3.9e-65 Score=470.62 Aligned_cols=231 Identities=29% Similarity=0.475 Sum_probs=205.9
Q ss_pred cCccc--cCCCChHHHHHHHHHHHHHhccchhhhHHHHHhh-----ccCCC--CCCceEeccCCCCCcccccCCCCCCCc
Q 021171 25 PCYYD--KVCPEALPTIKRIVEAAVEKEGRMGASLLRLHFH-----DCFVQ--GCDASILLDDTSTIDSEKNAIPNNNSV 95 (316)
Q Consensus 25 ~~~Y~--~sCP~~e~~V~~~v~~~~~~d~~~aa~llRl~FH-----Dc~v~--GcDgSill~~~~~~~~E~~~~~N~~~l 95 (316)
.+||. +-|+.+++.+++.+++.+ .+++++|.||||+|| ||+++ ||||||.. .+|+++++|. +|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~a~~~lRl~FHd~~t~dc~~~~GG~dgSi~~------~~E~~~~~N~-gl 74 (250)
T PLN02364 3 KNYPTVSEDYKKAVEKCRRKLRGLI-AEKNCAPIMVRLAWHSAGTFDCQSRTGGPFGTMRF------DAEQAHGANS-GI 74 (250)
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHH-hCCCcHHHHHHHHHccccCcCcCCCCCCCCccccc------cccccCCCcc-CH
Confidence 35665 347888999999999977 889999999999999 88876 99999944 4699999998 67
Q ss_pred -hhHHHHHHHHHHHhhhCCCCcccHhHHHHHhhhhHHhhcCCCCcccCCCCCCCCCcccccccCCCCCCCCCHHHHHHHH
Q 021171 96 -RGFEVIDLIKKELDKVCKRPVVSCADILAVAARDSVVALGGPTWKVPLGRRDSTTANRTLANNDIPSPFLNLTGLISSF 174 (316)
Q Consensus 96 -~g~~~i~~iK~~le~~cp~~~VScADiialAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F 174 (316)
+||++|+.||+++ + +|||||||+||||+||+++|||.|+|++||+|+.++.+ +++||.|+.++++|++.|
T Consensus 75 ~~~~~~i~~ik~~~-----~-~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~---~~~lP~p~~~~~~l~~~F 145 (250)
T PLN02364 75 HIALRLLDPIREQF-----P-TISFADFHQLAGVVAVEVTGGPDIPFHPGREDKPQPPP---EGRLPDATKGCDHLRDVF 145 (250)
T ss_pred HHHHHHHHHHHHHc-----C-CcCHHHHHHHHHHHHHHhcCCCeeCCCCCCCCcccccc---cCCCCCCCcCHHHHHHHH
Confidence 8999999999988 3 89999999999999999999999999999999999865 467999999999999999
Q ss_pred HH-cCCCcccchhccCCccccccccccccccccCCCCCCHHHHHHHhhcCCCCCCCCCCCCCCCCCCccChHHHHHHhhc
Q 021171 175 RR-QGLNETDLVALSGGHTIGFARCSAFRNRIYNATNIDPDFAKERQRTCPSTGGDSNLAPFDPTPLTFDGKYFSSLLQK 253 (316)
Q Consensus 175 ~~-~Gls~~e~VaLsGaHtiG~~hc~~f~~Rl~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~Tp~~FDN~Yy~~l~~~ 253 (316)
++ +|||++|||||+||||||++||. |+ +..+ +++.||.+|||+||++|+.+
T Consensus 146 ~~~~Gl~~~d~VaLsGaHTiG~~hc~----r~---------------------~~~g---~~~~tp~~fDn~Yy~~ll~~ 197 (250)
T PLN02364 146 AKQMGLSDKDIVALSGAHTLGRCHKD----RS---------------------GFEG---AWTSNPLIFDNSYFKELLSG 197 (250)
T ss_pred HHhcCCCHHHheeeecceeeccccCC----CC---------------------CCCC---CCCCCCCccchHHHHHHhcC
Confidence 97 69999999999999999999992 32 0111 23479999999999999998
Q ss_pred --CCCcc--hhhhcccCcchHHHHHHhhhCHHHHHHHHHHHHHHhhcCCCC
Q 021171 254 --RGLLI--SDQALFNGGSTDGLVKTYSLNFKAFSADFANSMIKMGNINVL 300 (316)
Q Consensus 254 --~glL~--SD~~L~~d~~t~~~V~~~A~d~~~F~~~Fa~Am~Km~~lgv~ 300 (316)
+|+|. ||++|+.|++|+.+|+.||.|++.|+++|++||+||++||+-
T Consensus 198 ~~~gll~l~sD~~L~~d~~T~~~v~~~a~~~~~F~~~Fa~Am~Km~~lg~~ 248 (250)
T PLN02364 198 EKEGLLQLVSDKALLDDPVFRPLVEKYAADEDAFFADYAEAHMKLSELGFA 248 (250)
T ss_pred CcCCCccccchHHHccCchHHHHHHHHhhCHHHHHHHHHHHHHHHHccCCC
Confidence 89865 999999999999999999999999999999999999999974
No 7
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases. Ligninases and related extracellular fungal peroxidases belong to class II of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class II peroxidases are fungal glycoproteins that have been implicated in the oxidative breakdown of lignin, the main cell wall component of woody plants. They contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=2.3e-64 Score=479.81 Aligned_cols=236 Identities=26% Similarity=0.376 Sum_probs=212.5
Q ss_pred hHHHHHHHHHHHHHhccc---hhhhHHHHHhhccCC------------CCCCceEeccCCCCCcccccCCCCCCCchhHH
Q 021171 35 ALPTIKRIVEAAVEKEGR---MGASLLRLHFHDCFV------------QGCDASILLDDTSTIDSEKNAIPNNNSVRGFE 99 (316)
Q Consensus 35 ~e~~V~~~v~~~~~~d~~---~aa~llRl~FHDc~v------------~GcDgSill~~~~~~~~E~~~~~N~~~l~g~~ 99 (316)
+|..|+++|++.+..+.. .|+.+|||+||||++ +|||||||++.+ .|+++++|. +|+ +
T Consensus 16 ~~~~v~~dl~~~~~~~~~c~~~a~~~lRL~FHD~~~~~~~~~~~~~~~gGcDgSill~~~----~E~~~~~N~-gL~--~ 88 (328)
T cd00692 16 VWFDILDDIQGNLFNGGECGEEAHESLRLTFHDAIGFSPALAAGQFGGGGADGSIVLFDD----IETAFHANI-GLD--E 88 (328)
T ss_pred chHHHHHHHHHHHhcCCCCchHHHHhHHHhhhcccccccccccCCCCCCCcCceeecCCc----ccccCCCCC-CHH--H
Confidence 588999999999986644 677799999999996 799999999853 699999998 786 9
Q ss_pred HHHHHHHHHhhhCCCCcccHhHHHHHhhhhHHh-hcCCCCcccCCCCCCCCCcccccccCCCCCCCCCHHHHHHHHHHcC
Q 021171 100 VIDLIKKELDKVCKRPVVSCADILAVAARDSVV-ALGGPTWKVPLGRRDSTTANRTLANNDIPSPFLNLTGLISSFRRQG 178 (316)
Q Consensus 100 ~i~~iK~~le~~cp~~~VScADiialAar~av~-~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~G 178 (316)
+|+.||..+|+.| |||||||+||||+||+ ++|||.|+|++||+|++++.+ +++||.|+.++++|++.|+++|
T Consensus 89 vvd~lk~~~e~~c----VScADiialAa~~AV~~~~GGP~i~v~~GR~D~~~s~~---~g~LP~p~~sv~~l~~~F~~~G 161 (328)
T cd00692 89 IVEALRPFHQKHN----VSMADFIQFAGAVAVSNCPGAPRLEFYAGRKDATQPAP---DGLVPEPFDSVDKILARFADAG 161 (328)
T ss_pred HHHHHHHHHHhcC----cCHHHHHHHHHHHHHHhcCCCCcccccCCCCCCCCCCc---ccCCCCCCCCHHHHHHHHHHcC
Confidence 9999999999986 9999999999999999 679999999999999998864 4589999999999999999999
Q ss_pred CCcccchhccCCccccccccccccccccCCCCCCHHHHHHHhhcCCCCCCCCCCCCCCCCCCccChHHHHHHh-hcCC--
Q 021171 179 LNETDLVALSGGHTIGFARCSAFRNRIYNATNIDPDFAKERQRTCPSTGGDSNLAPFDPTPLTFDGKYFSSLL-QKRG-- 255 (316)
Q Consensus 179 ls~~e~VaLsGaHtiG~~hc~~f~~Rl~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~Tp~~FDN~Yy~~l~-~~~g-- 255 (316)
||++|||+|+||||||++|. . ||+++ .++||.||.+|||+||+|++ .+++
T Consensus 162 f~~~E~VaLsGAHTiG~a~~------~--Dps~~-------------------g~p~D~TP~~FDn~Yf~~ll~~~~~~~ 214 (328)
T cd00692 162 FSPDELVALLAAHSVAAQDF------V--DPSIA-------------------GTPFDSTPGVFDTQFFIETLLKGTAFP 214 (328)
T ss_pred CCHHHHhhhcccccccccCC------C--CCCCC-------------------CCCCCCCcchhcHHHHHHHHHcCCCCC
Confidence 99999999999999999993 1 66664 14688999999999999987 4555
Q ss_pred -----------------CcchhhhcccCcchHHHHHHhhhCHHHHHHHHHHHHHHhhcCCCCCCCCCccccccccCC
Q 021171 256 -----------------LLISDQALFNGGSTDGLVKTYSLNFKAFSADFANSMIKMGNINVLTGNKGQIRSNCRRLN 315 (316)
Q Consensus 256 -----------------lL~SD~~L~~d~~t~~~V~~~A~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~~n 315 (316)
+|+||++|+.|++|+.+|++||.||++|+++|++||+||++|||. ...+.+|+.|+
T Consensus 215 g~~~~~~e~~~~~~g~~~L~SD~~L~~D~~T~~~v~~fa~dq~~f~~~Fa~Am~KLs~lgv~----~~~l~dcs~v~ 287 (328)
T cd00692 215 GSGGNQGEVESPLPGEFRLQSDFLLARDPRTACEWQSFVNNQAKMNAAFAAAMLKLSLLGQD----NISLTDCSDVI 287 (328)
T ss_pred CccccccccccCccccccccchHHHhcCCcHHHHHHHHhcCHHHHHHHHHHHHHHHHcCCCC----cchhccCcccC
Confidence 499999999999999999999999999999999999999999987 34778999987
No 8
>PLN02879 L-ascorbate peroxidase
Probab=100.00 E-value=7.4e-64 Score=461.47 Aligned_cols=218 Identities=30% Similarity=0.460 Sum_probs=196.0
Q ss_pred HHHHHHHHHHHhccchhhhHHHHHhhccCC-------CCCCceEeccCCCCCcccccCCCCCCCch-hHHHHHHHHHHHh
Q 021171 38 TIKRIVEAAVEKEGRMGASLLRLHFHDCFV-------QGCDASILLDDTSTIDSEKNAIPNNNSVR-GFEVIDLIKKELD 109 (316)
Q Consensus 38 ~V~~~v~~~~~~d~~~aa~llRl~FHDc~v-------~GcDgSill~~~~~~~~E~~~~~N~~~l~-g~~~i~~iK~~le 109 (316)
-+++.+.+.+ ++..++|.+|||+||||.+ +||||||.+. +|+++++|. +|+ ++++|+.||+++
T Consensus 19 ~~~~~~~~~~-~~~~~~p~~vRla~Hdagt~~~~~~~GG~~Gsirf~------~E~~~~~N~-gL~~~~~~i~~iK~~~- 89 (251)
T PLN02879 19 RCKRKLRGLI-AEKHCAPIVLRLAWHSAGTFDVKTKTGGPFGTIRHP------QELAHDANN-GLDIAVRLLDPIKELF- 89 (251)
T ss_pred HHHHHHHHHH-hCCCchhHhHHHHHhhhccccCCCCCCCCCeeecCh------hhccCCCcC-ChHHHHHHHHHHHHHc-
Confidence 4466677665 5679999999999999975 7999999763 599999999 888 999999999987
Q ss_pred hhCCCCcccHhHHHHHhhhhHHhhcCCCCcccCCCCCCCCCcccccccCCCCCCCCCHHHHHHHHHHcCCCcccchhccC
Q 021171 110 KVCKRPVVSCADILAVAARDSVVALGGPTWKVPLGRRDSTTANRTLANNDIPSPFLNLTGLISSFRRQGLNETDLVALSG 189 (316)
Q Consensus 110 ~~cp~~~VScADiialAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~e~VaLsG 189 (316)
+ +|||||||+||||+||+++|||.|+|++||+|+.++.+ +++||.|+.++++|++.|+++|||++|||||+|
T Consensus 90 ----~-~VScADilalAa~~AV~~~GGP~~~~~~GR~D~~~~~~---~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVALsG 161 (251)
T PLN02879 90 ----P-ILSYADFYQLAGVVAVEITGGPEIPFHPGRLDKVEPPP---EGRLPQATKGVDHLRDVFGRMGLNDKDIVALSG 161 (251)
T ss_pred ----C-CcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCCCCc---ccCCCCCCCCHHHHHHHHHHcCCCHHHHeeeec
Confidence 2 89999999999999999999999999999999998854 468999999999999999999999999999999
Q ss_pred CccccccccccccccccCCCCCCHHHHHHHhhcCCCCCCCCCCCCCCCCCCccChHHHHHHhhc--CCC--cchhhhccc
Q 021171 190 GHTIGFARCSAFRNRIYNATNIDPDFAKERQRTCPSTGGDSNLAPFDPTPLTFDGKYFSSLLQK--RGL--LISDQALFN 265 (316)
Q Consensus 190 aHtiG~~hc~~f~~Rl~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~Tp~~FDN~Yy~~l~~~--~gl--L~SD~~L~~ 265 (316)
|||||++||. |. +.++ .||.||.+|||+||++|+.+ +|+ |+||++|+.
T Consensus 162 aHTiG~ah~~----r~---------------------g~~g---~~d~tp~~FDN~Yy~~ll~~~~~gll~L~SD~aL~~ 213 (251)
T PLN02879 162 GHTLGRCHKE----RS---------------------GFEG---AWTPNPLIFDNSYFKEILSGEKEGLLQLPTDKALLD 213 (251)
T ss_pred cccccccccc----cc---------------------cCCC---CCCCCccceeHHHHHHHHcCCcCCCccchhhHHHhc
Confidence 9999999994 21 1111 35689999999999999999 888 679999999
Q ss_pred CcchHHHHHHhhhCHHHHHHHHHHHHHHhhcCCCC
Q 021171 266 GGSTDGLVKTYSLNFKAFSADFANSMIKMGNINVL 300 (316)
Q Consensus 266 d~~t~~~V~~~A~d~~~F~~~Fa~Am~Km~~lgv~ 300 (316)
|++|+++|++||.||++||++|++||+||++||+.
T Consensus 214 D~~t~~~V~~~A~d~~~F~~~Fa~Am~KL~~lg~~ 248 (251)
T PLN02879 214 DPLFLPFVEKYAADEDAFFEDYTEAHLKLSELGFA 248 (251)
T ss_pred CCcHHHHHHHHhhCHHHHHHHHHHHHHHHHccCCC
Confidence 99999999999999999999999999999999975
No 9
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised
Probab=100.00 E-value=3.7e-59 Score=433.17 Aligned_cols=224 Identities=36% Similarity=0.518 Sum_probs=204.4
Q ss_pred HHHHHHHHHHHhccchhhhHHHHHhhccCCC--------CCCceEeccCCCCCcccccCCCCCCCchhHHHHHHHHHHHh
Q 021171 38 TIKRIVEAAVEKEGRMGASLLRLHFHDCFVQ--------GCDASILLDDTSTIDSEKNAIPNNNSVRGFEVIDLIKKELD 109 (316)
Q Consensus 38 ~V~~~v~~~~~~d~~~aa~llRl~FHDc~v~--------GcDgSill~~~~~~~~E~~~~~N~~~l~g~~~i~~iK~~le 109 (316)
.|+..|++.+.+++.+++.+|||+||||+++ ||||||++++ |+++++|.+..+++++|+.||.+++
T Consensus 2 ~v~~~l~~~~~~~~~~~~~llRl~fHD~~~~~~~~~~~gg~dgsi~~~~------e~~~~~N~~l~~~~~~l~~ik~~~~ 75 (255)
T cd00314 2 AIKAILEDLITQAGALAGSLLRLAFHDAGTYDIADGKGGGADGSIRFEP------ELDRPENGGLDKALRALEPIKSAYD 75 (255)
T ss_pred hHHHHHHHHHHhCcchHHHHHHHHHHHhccccccCCCCCCCCceEeccc------cccCcccccHHHHHHHHHHHHHHcC
Confidence 5888999999999999999999999999997 9999999973 9999999844589999999999999
Q ss_pred hhCCCCcccHhHHHHHhhhhHHhhc--CCCCcccCCCCCCCCCcc--cccccCCCCCCCCCHHHHHHHHHHcCCCcccch
Q 021171 110 KVCKRPVVSCADILAVAARDSVVAL--GGPTWKVPLGRRDSTTAN--RTLANNDIPSPFLNLTGLISSFRRQGLNETDLV 185 (316)
Q Consensus 110 ~~cp~~~VScADiialAar~av~~~--GGP~~~v~~GR~D~~~s~--~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~e~V 185 (316)
. |+ +|||||||+||+++||+.+ |||.|+|++||+|+..+. ...+...+|.|+.+++++++.|+++||+++|||
T Consensus 76 ~--~~-~vS~ADlialAa~~Av~~~~~ggp~~~~~~GR~D~~~~~~~~p~P~~~~p~~~~~~~~~~~~F~~~Gl~~~e~V 152 (255)
T cd00314 76 G--GN-PVSRADLIALAGAVAVESTFGGGPLIPFRFGRLDATEPDLGVPDPEGLLPNETSSATELRDKFKRMGLSPSELV 152 (255)
T ss_pred C--CC-cccHHHHHHHHHHHHHHHhccCCCeeeeCCCCCCCchhhccCCCCCCCCCCccchHHHHHHHHHHcCCCHHHHH
Confidence 8 87 9999999999999999999 999999999999999764 334456788888999999999999999999999
Q ss_pred hcc-CCccc-cccccccccccccCCCCCCHHHHHHHhhcCCCCCCCCCCCCCCCCCCccChHHHHHHhhcC---------
Q 021171 186 ALS-GGHTI-GFARCSAFRNRIYNATNIDPDFAKERQRTCPSTGGDSNLAPFDPTPLTFDGKYFSSLLQKR--------- 254 (316)
Q Consensus 186 aLs-GaHti-G~~hc~~f~~Rl~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~Tp~~FDN~Yy~~l~~~~--------- 254 (316)
||+ ||||| |++||..+..|+ | ..++.||.+|||+||++++.++
T Consensus 153 AL~~GaHti~G~~~~~~~~~~~-----------------~---------~~~~~tp~~fDN~yy~~l~~~~~~~~~~~~~ 206 (255)
T cd00314 153 ALSAGAHTLGGKNHGDLLNYEG-----------------S---------GLWTSTPFTFDNAYFKNLLDMNWEWRVGSPD 206 (255)
T ss_pred hhccCCeeccCcccCCCCCccc-----------------C---------CCCCCCCCccchHHHHHHhcCCcccccCCcc
Confidence 999 99999 999998776543 2 1233799999999999999998
Q ss_pred -------CCcchhhhcccCcchHHHHHHhhhCHHHHHHHHHHHHHHhhc
Q 021171 255 -------GLLISDQALFNGGSTDGLVKTYSLNFKAFSADFANSMIKMGN 296 (316)
Q Consensus 255 -------glL~SD~~L~~d~~t~~~V~~~A~d~~~F~~~Fa~Am~Km~~ 296 (316)
++|+||++|+.|++|+.+|++||.|+++|+++|++||+||++
T Consensus 207 ~~~~~~~~~l~sD~~L~~d~~t~~~v~~ya~~~~~f~~~Fa~a~~Km~~ 255 (255)
T cd00314 207 PDGVKGPGLLPSDYALLSDSETRALVERYASDQEKFFEDFAKAWIKMVN 255 (255)
T ss_pred CCCcccCCCchhhHHHhcCHhHHHHHHHHHhCHHHHHHHHHHHHHHHcC
Confidence 899999999999999999999999999999999999999985
No 10
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms, where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to class I of the plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C
Probab=100.00 E-value=1.5e-56 Score=432.87 Aligned_cols=272 Identities=20% Similarity=0.308 Sum_probs=228.0
Q ss_pred CCcCc-cccCCCCh-HHHHHHHHHHHHHhc--------cchhhhHHHHHhhccCC-------CCCC-ceEeccCCCCCcc
Q 021171 23 LSPCY-YDKVCPEA-LPTIKRIVEAAVEKE--------GRMGASLLRLHFHDCFV-------QGCD-ASILLDDTSTIDS 84 (316)
Q Consensus 23 l~~~~-Y~~sCP~~-e~~V~~~v~~~~~~d--------~~~aa~llRl~FHDc~v-------~GcD-gSill~~~~~~~~ 84 (316)
+-.+| |.+.+-.. .+.|+++|++.+.+. ...+|.+|||+|||+.+ +|++ |+|.+ .+
T Consensus 29 ~~~~~~~~~~~~~~d~~~~~~di~~ll~~s~~~wp~D~g~~gp~lvRlAWh~AgTy~~~d~~GG~ngg~iRf------~p 102 (409)
T cd00649 29 MGEDFNYAEEFKKLDLEALKEDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIADGRGGAGTGQQRF------AP 102 (409)
T ss_pred CCCCCCHHHHhhhccHHHHHHHHHHHHhcccccCccccCCcccceeeeeccccccccCcCCCCCCCCCcccc------cc
Confidence 44444 44444333 378999999998764 47999999999999986 5886 77766 46
Q ss_pred cccCCCCCCCchhHHHHHHHHHHHhhhCCCCcccHhHHHHHhhhhHHhhcCCCCcccCCCCCCCCCcccc----------
Q 021171 85 EKNAIPNNNSVRGFEVIDLIKKELDKVCKRPVVSCADILAVAARDSVVALGGPTWKVPLGRRDSTTANRT---------- 154 (316)
Q Consensus 85 E~~~~~N~~~l~g~~~i~~iK~~le~~cp~~~VScADiialAar~av~~~GGP~~~v~~GR~D~~~s~~~---------- 154 (316)
|++++.|.+.-+++.+++.||+++ |. .||+||+|+||+.+|||.+|||.|+|.+||.|...+...
T Consensus 103 e~~~~~N~gL~~a~~~L~pik~k~----~~-~iS~ADL~~LaG~~AiE~~Ggp~ipf~~GR~Da~~~~~~v~wg~~~~~~ 177 (409)
T cd00649 103 LNSWPDNVNLDKARRLLWPIKQKY----GN-KISWADLMILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGPEKEWL 177 (409)
T ss_pred ccCcHhhhhHHHHHHHHHHHHHHc----CC-CccHHHHHHHHHHHHHHHcCCCcccccCCCCccCCCccccccCcchhcc
Confidence 999999983334667777777655 43 799999999999999999999999999999999764321
Q ss_pred ---------------------------cccCCCCCCCCCHHHHHHHHHHcCCCcccchhc-cCCcccccccccccccccc
Q 021171 155 ---------------------------LANNDIPSPFLNLTGLISSFRRQGLNETDLVAL-SGGHTIGFARCSAFRNRIY 206 (316)
Q Consensus 155 ---------------------------~~~~~lP~p~~~~~~l~~~F~~~Gls~~e~VaL-sGaHtiG~~hc~~f~~Rl~ 206 (316)
+.+..||+|..++.+|++.|++||||++||||| +||||||++||..|.+|+.
T Consensus 178 ~~~~~~~~~~l~~pl~a~~mgliyv~Pegp~gLPdP~~sa~~LR~~F~RmGlnd~E~VAL~sGAHTiGkaHc~~~~~rlg 257 (409)
T cd00649 178 ADKRYSGDRDLENPLAAVQMGLIYVNPEGPDGNPDPLAAAKDIRETFARMAMNDEETVALIAGGHTFGKTHGAGPASHVG 257 (409)
T ss_pred cccccccchhhccchhhhhccccccCCCCCCCCCCCccCHHHHHHHHHHcCCCHHHHeeeccCCcceeecCcccccccCC
Confidence 112269999999999999999999999999999 5999999999999999999
Q ss_pred CCCCCCHHHHHHHh--hcCCCCCC-CCCCCCCC----CCCCccChHHHHHHhh---------------------------
Q 021171 207 NATNIDPDFAKERQ--RTCPSTGG-DSNLAPFD----PTPLTFDGKYFSSLLQ--------------------------- 252 (316)
Q Consensus 207 ~dp~~d~~~~~~L~--~~Cp~~~~-~~~~~~~D----~Tp~~FDN~Yy~~l~~--------------------------- 252 (316)
.||++++.|++.|+ .+||.... +.....+| .||.+|||+||++|+.
T Consensus 258 ~dP~~~~~~~~gLgw~~~Cp~g~g~~t~~sglDG~Wt~tP~~FDN~YF~nLl~~eW~~~~~p~g~~Q~~~~~~~~~~~~~ 337 (409)
T cd00649 258 PEPEAAPIEQQGLGWKNSYGTGKGKDTITSGLEGAWTPTPTKWDNNYLKNLFGYEWELTKSPAGAWQWVPKNAAGENTVP 337 (409)
T ss_pred CCCCcCHHHHHhhcccccCCCCCCCCCccccCCCCCCCCcchhhHHHHHHHHhccceeccCCCCcccccccCccccccCC
Confidence 99999999999996 89996422 22233455 6999999999999998
Q ss_pred ---------cCCCcchhhhcccCcchHHHHHHhhhCHHHHHHHHHHHHHHh--hcCCCCCCCCC
Q 021171 253 ---------KRGLLISDQALFNGGSTDGLVKTYSLNFKAFSADFANSMIKM--GNINVLTGNKG 305 (316)
Q Consensus 253 ---------~~glL~SD~~L~~d~~t~~~V~~~A~d~~~F~~~Fa~Am~Km--~~lgv~tg~~G 305 (316)
+.|||+||++|+.|++|+++|++||.|++.||++|++||+|| +.+|+++--.|
T Consensus 338 d~~~~~~~~~~gmL~SD~aL~~Dp~tr~iV~~yA~d~~~Ff~dFA~A~~KL~hrdmgp~~~~~g 401 (409)
T cd00649 338 DAHDPSKKHAPMMLTTDLALRFDPEYEKISRRFLENPDEFADAFAKAWFKLTHRDMGPKSRYLG 401 (409)
T ss_pred CccccccccCcccchhhHhhhcCccHHHHHHHHhcCHHHHHHHHHHHHHHHccccCCchhhhcC
Confidence 568999999999999999999999999999999999999999 68999886555
No 11
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=2.4e-53 Score=433.77 Aligned_cols=269 Identities=19% Similarity=0.259 Sum_probs=221.8
Q ss_pred CCcCc-cccCCCCh-HHHHHHHHHHHHHhc--------cchhhhHHHHHhhccCC-------CCC-CceEeccCCCCCcc
Q 021171 23 LSPCY-YDKVCPEA-LPTIKRIVEAAVEKE--------GRMGASLLRLHFHDCFV-------QGC-DASILLDDTSTIDS 84 (316)
Q Consensus 23 l~~~~-Y~~sCP~~-e~~V~~~v~~~~~~d--------~~~aa~llRl~FHDc~v-------~Gc-DgSill~~~~~~~~ 84 (316)
+-.+| |.+.+-+. .+.|+++|++.+.+. ...+|.+|||+||++.+ +|| .|+|.+ .+
T Consensus 39 ~~~~f~y~~~~~~ld~~a~~~dl~~l~~~s~~wwpad~g~ygp~~vRlAWHsAgTYr~~d~rGGa~gg~iRf------~P 112 (716)
T TIGR00198 39 MGEDFDYAEEFQQLDLAAVKQDLKHLMTDSQSWWPADWGHYGGLFIRMAWHAAGTYRIADGRGGAATGNQRF------AP 112 (716)
T ss_pred CCCCccHHHHhhhccHHHHHHHHHHHHhcCcccCccccCCcceeeeeeeccccccccCCCCCCCCCCCceec------cc
Confidence 44444 44444332 357999999999864 47999999999999987 577 477766 46
Q ss_pred cccCCCCCCCchhHHHHHHHHHHHhhhCCCCcccHhHHHHHhhhhHHhhcCCCCcccCCCCCCCCCccc-----------
Q 021171 85 EKNAIPNNNSVRGFEVIDLIKKELDKVCKRPVVSCADILAVAARDSVVALGGPTWKVPLGRRDSTTANR----------- 153 (316)
Q Consensus 85 E~~~~~N~~~l~g~~~i~~iK~~le~~cp~~~VScADiialAar~av~~~GGP~~~v~~GR~D~~~s~~----------- 153 (316)
|++++.|.+.-+++.+++.|| ++||+ +|||||||+||+++||+.+|||.|+|.+||+|+..+..
T Consensus 113 ~~sw~~N~~Ldka~~lL~pIk----~kyp~-~VS~ADLivLAG~vAVE~~Ggp~i~f~~GR~D~~~~~~d~~~g~e~~~l 187 (716)
T TIGR00198 113 LNSWPDNVNLDKARRLLWPIK----KKYGN-KLSWADLIILAGTVAYESMGLKVFGFAGGREDIWEPDKDIYWGAEKEWL 187 (716)
T ss_pred ccCchhhhhHHHHHHHHHHHH----HHCCC-ceeHHHHHHHHHHHHHHHhCCCccCCCCCCCCCCCcccccccccccchh
Confidence 999999982223555555555 57897 99999999999999999999999999999999943320
Q ss_pred ---------------c----------cccCCCCCCCCCHHHHHHHHHHcCCCcccchhcc-CCccccccccccccccccC
Q 021171 154 ---------------T----------LANNDIPSPFLNLTGLISSFRRQGLNETDLVALS-GGHTIGFARCSAFRNRIYN 207 (316)
Q Consensus 154 ---------------~----------~~~~~lP~p~~~~~~l~~~F~~~Gls~~e~VaLs-GaHtiG~~hc~~f~~Rl~~ 207 (316)
. +....+|+|..++.+|++.|++||||++|||||+ ||||||++||.+|.+|+-.
T Consensus 188 ~~~~~~~~~l~~p~a~~~~Gliyvnpeg~~~lPdP~~sa~~Lrd~F~rmGLnd~EmVALiaGaHTiGkaHc~s~~~rlg~ 267 (716)
T TIGR00198 188 TSSREDRESLENPLAATEMGLIYVNPEGPDGHPDPLCTAQDIRTTFARMGMNDEETVALIAGGHTVGKCHGAGPAELIGP 267 (716)
T ss_pred hccccccccccccchhhhccccccCcccccCCCCCCCCHHHHHHHHHHcCCChHHHeeeecCceeccccCCCcccccCCC
Confidence 0 1122699999999999999999999999999995 9999999999999999988
Q ss_pred CCCCCHHHHHHHhhcCCCCC---CCCCCCCCC----CCCCccChHHHHHHhhc---------------------------
Q 021171 208 ATNIDPDFAKERQRTCPSTG---GDSNLAPFD----PTPLTFDGKYFSSLLQK--------------------------- 253 (316)
Q Consensus 208 dp~~d~~~~~~L~~~Cp~~~---~~~~~~~~D----~Tp~~FDN~Yy~~l~~~--------------------------- 253 (316)
||+++|.|++.|+.+||... .+.....+| .||.+|||+||+||+..
T Consensus 268 dP~~~~~~~~gLg~~c~~~~g~g~dt~~sglDG~wT~TP~~FDN~YF~nLl~~~w~~~~s~~g~~q~~~~~~~~~~p~~~ 347 (716)
T TIGR00198 268 DPEGAPIEEQGLGWHNQYGKGVGRDTMTSGLEVAWTTTPTQWDNGYFYMLFNYEWELKKSPAGAWQWEAVDAPEIIPDVE 347 (716)
T ss_pred CCCcCHHHHHHhcccCCCCCCCCCCcccccCCCCCCCCCCccchHHHHHHhcCCceeeecCCCCceeeeccccccccccc
Confidence 99999999999999998521 122233454 69999999999999975
Q ss_pred -------CCCcchhhhcccCcchHHHHHHhhhCHHHHHHHHHHHHHHhh--cCCCCCC
Q 021171 254 -------RGLLISDQALFNGGSTDGLVKTYSLNFKAFSADFANSMIKMG--NINVLTG 302 (316)
Q Consensus 254 -------~glL~SD~~L~~d~~t~~~V~~~A~d~~~F~~~Fa~Am~Km~--~lgv~tg 302 (316)
.++|+||++|..|++++++|+.||.|++.|+++|++||.||+ .+|++.-
T Consensus 348 ~~~~~~~~~mL~SDlaL~~Dp~~r~iVe~yA~d~~~F~~dFA~Aw~KL~~~d~gp~~~ 405 (716)
T TIGR00198 348 DPNKKHNPIMLDADLALRFDPEFRKISRRFLREPDYFAEAFAKAWFKLTHRDMGPKSR 405 (716)
T ss_pred ccccccccCccchhHHhccCccHHHHHHHHhcCHHHHHHHHHHHHHHHcccccCchhh
Confidence 689999999999999999999999999999999999999999 5666543
No 12
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins. This is a subgroup of heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX) which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions.
Probab=100.00 E-value=3.7e-51 Score=376.98 Aligned_cols=212 Identities=27% Similarity=0.366 Sum_probs=178.4
Q ss_pred HHHHhccchhhhHHHHHhhccC-------CCCCCceEeccCCCCCccccc-CCCCCCCchhHHHHHHHHHHHhhhCCCCc
Q 021171 45 AAVEKEGRMGASLLRLHFHDCF-------VQGCDASILLDDTSTIDSEKN-AIPNNNSVRGFEVIDLIKKELDKVCKRPV 116 (316)
Q Consensus 45 ~~~~~d~~~aa~llRl~FHDc~-------v~GcDgSill~~~~~~~~E~~-~~~N~~~l~g~~~i~~iK~~le~~cp~~~ 116 (316)
.+...+++++|+||||+||||| ++||||||+++.. .+|+. .+.|. ++++|+.|+.+ +
T Consensus 33 ~~~~~~~~~aa~~LRL~FHDc~t~~~~~g~gGcDgSIlle~~---~~En~G~~~n~-~l~~~~~i~~~-----------~ 97 (264)
T cd08201 33 CAPGPGRQAAAEWLRTAFHDMATHNVDDGTGGLDASIQYELD---RPENIGSGFNT-TLNFFVNFYSP-----------R 97 (264)
T ss_pred cCcCCCccHHHHHHHHHHHhhcCcccCCCCCCCCcceeecCC---ChhhccCchhh-ccccceeeccC-----------c
Confidence 3445788999999999999999 7899999999842 46887 44554 78888877542 6
Q ss_pred ccHhHHHHHhhhhHHhhcCCCCcccCCCCCCCCCcccccccCCCCCCCCCHHHHHHHHHHcCCCcccchhccC-Cccccc
Q 021171 117 VSCADILAVAARDSVVALGGPTWKVPLGRRDSTTANRTLANNDIPSPFLNLTGLISSFRRQGLNETDLVALSG-GHTIGF 195 (316)
Q Consensus 117 VScADiialAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~e~VaLsG-aHtiG~ 195 (316)
||||||||||||+||+.+|||.|+|++||+|+.++.+. .||.|+.++++|++.|+++||+++|||+|+| |||||+
T Consensus 98 VScADiialAa~~AV~~~GGP~i~v~~GR~Da~~s~~~----glP~P~~~v~~l~~~Fa~~Gfs~~DmVaLsggaHTiG~ 173 (264)
T cd08201 98 SSMADLIAMGVVTSVASCGGPVVPFRAGRIDATEAGQA----GVPEPQTDLGTTTESFRRQGFSTSEMIALVACGHTLGG 173 (264)
T ss_pred cCHHHHHHHHHHHHHHHcCCCeecccccCCCccccccc----cCCCCccCHHHHHHHHHHcCCChHHHheeecCCeeeee
Confidence 99999999999999999999999999999999988764 4999999999999999999999999999995 999999
Q ss_pred cccccccccccCCCCCCHHHHHHHhhcCCCCCCC-CCCCCCCCCCCccChHHHHHHhhcCC----------Ccchhhhcc
Q 021171 196 ARCSAFRNRIYNATNIDPDFAKERQRTCPSTGGD-SNLAPFDPTPLTFDGKYFSSLLQKRG----------LLISDQALF 264 (316)
Q Consensus 196 ~hc~~f~~Rl~~dp~~d~~~~~~L~~~Cp~~~~~-~~~~~~D~Tp~~FDN~Yy~~l~~~~g----------lL~SD~~L~ 264 (316)
+||..|.++. +| +.. +...+||.||.+|||+||.+++.+.. .+.||..++
T Consensus 174 ahc~~f~~~~--~~-----------------g~~~~~~~p~dstp~~FDn~~f~E~l~g~~~~~L~~~~~~~~~sd~r~f 234 (264)
T cd08201 174 VHSEDFPEIV--PP-----------------GSVPDTVLQFFDTTIQFDNKVVTEYLSGTTNNPLVVGPNNTTNSDLRIF 234 (264)
T ss_pred cccccchhhc--CC-----------------ccccCCCCCCCCCccccchHHHHHHhcCCCCCceeecCCCCccchhhhe
Confidence 9999887654 11 111 12357899999999999999998752 367999999
Q ss_pred cCcchHHHHHHhhhCHHHHHHHHHHHHHHhhc
Q 021171 265 NGGSTDGLVKTYSLNFKAFSADFANSMIKMGN 296 (316)
Q Consensus 265 ~d~~t~~~V~~~A~d~~~F~~~Fa~Am~Km~~ 296 (316)
..... ..++..| +++.|.+.++..++||.+
T Consensus 235 ~~d~n-~t~~~l~-~~~~f~~~c~~~~~~mi~ 264 (264)
T cd08201 235 SSDGN-VTMNELA-SPDTFQKTCADILQRMID 264 (264)
T ss_pred ecCcc-HHHHHhc-ChHHHHHHHHHHHHHHhC
Confidence 76554 4567787 799999999999999974
No 13
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=6.3e-50 Score=406.68 Aligned_cols=270 Identities=20% Similarity=0.291 Sum_probs=222.8
Q ss_pred CCcCc-cccCCCCh-HHHHHHHHHHHHHhc--------cchhhhHHHHHhhccCC-------CCCC-ceEeccCCCCCcc
Q 021171 23 LSPCY-YDKVCPEA-LPTIKRIVEAAVEKE--------GRMGASLLRLHFHDCFV-------QGCD-ASILLDDTSTIDS 84 (316)
Q Consensus 23 l~~~~-Y~~sCP~~-e~~V~~~v~~~~~~d--------~~~aa~llRl~FHDc~v-------~GcD-gSill~~~~~~~~ 84 (316)
+-.+| |.+.+-.. .+.|+++|.+.+.+. ...+|.+|||+||++.+ +||+ |+|.+ .+
T Consensus 41 ~~~~f~y~~~~~~ld~~a~k~di~~l~~~sqdwwpaD~g~ygp~~vRlAWH~AgTYr~~d~rGGangg~iRf------~p 114 (726)
T PRK15061 41 MGEDFDYAEEFKKLDLEALKKDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIGDGRGGAGGGQQRF------AP 114 (726)
T ss_pred CCCCCCHHHHhchhhHHHHHHHHHHHHhcccccccccCCCccceeeeeeecccccccCcCCCCCCCCCcccC------cc
Confidence 44444 55444332 367999999998764 47999999999999987 5785 67755 57
Q ss_pred cccCCCCCCCchhHHHHHHHHHHHhhhCCCCcccHhHHHHHhhhhHHhhcCCCCcccCCCCCCCCCcccc----------
Q 021171 85 EKNAIPNNNSVRGFEVIDLIKKELDKVCKRPVVSCADILAVAARDSVVALGGPTWKVPLGRRDSTTANRT---------- 154 (316)
Q Consensus 85 E~~~~~N~~~l~g~~~i~~iK~~le~~cp~~~VScADiialAar~av~~~GGP~~~v~~GR~D~~~s~~~---------- 154 (316)
|++++.|.+.-+++.+++.||+++ |. .||+||+|+||+.+|||.+|||.|+|.+||.|...+...
T Consensus 115 e~~w~~N~gL~ka~~~L~pik~ky----~~-~iS~ADLi~LaG~vAiE~~Ggp~i~f~~GR~D~~~~~~~v~wg~e~~~l 189 (726)
T PRK15061 115 LNSWPDNVNLDKARRLLWPIKQKY----GN-KISWADLMILAGNVALESMGFKTFGFAGGREDVWEPEEDVYWGPEKEWL 189 (726)
T ss_pred cccchhhhhHHHHHHHHHHHHHHh----CC-CccHHHHHHHHHHHHHHHcCCCccCcCCCCCCCcCCccccccCcccccc
Confidence 999999983334677777777665 43 799999999999999999999999999999998654321
Q ss_pred ----------------------------cccCCCCCCCCCHHHHHHHHHHcCCCcccchhcc-CCccccccccccccccc
Q 021171 155 ----------------------------LANNDIPSPFLNLTGLISSFRRQGLNETDLVALS-GGHTIGFARCSAFRNRI 205 (316)
Q Consensus 155 ----------------------------~~~~~lP~p~~~~~~l~~~F~~~Gls~~e~VaLs-GaHtiG~~hc~~f~~Rl 205 (316)
+-+..+|+|..++.+|++.|++||||++|||||+ ||||||++||..|.+|+
T Consensus 190 ~~~~r~~~~~~l~~pl~a~~mgliyvnpegp~glPdP~~sa~~lR~tF~RMGmnDeEtVALiaGgHT~GkaHca~~~~rl 269 (726)
T PRK15061 190 GGDERYSGERDLENPLAAVQMGLIYVNPEGPNGNPDPLAAARDIRETFARMAMNDEETVALIAGGHTFGKTHGAGDASHV 269 (726)
T ss_pred ccccccccccccccchhhhhccceecCCCCCCCCCCcccCHHHHHHHHHHcCCCHHHheeeccCCceeeeCCCcCccccc
Confidence 0012389999999999999999999999999995 99999999999999999
Q ss_pred cCCCCCCHHHHHHHh--hcCCCCC-CCCCCCCCC----CCCCccChHHHHHHhhc-------------------------
Q 021171 206 YNATNIDPDFAKERQ--RTCPSTG-GDSNLAPFD----PTPLTFDGKYFSSLLQK------------------------- 253 (316)
Q Consensus 206 ~~dp~~d~~~~~~L~--~~Cp~~~-~~~~~~~~D----~Tp~~FDN~Yy~~l~~~------------------------- 253 (316)
-.||++++.+++.|. +.||.+. .+.....+| .||.+|||+||++|+..
T Consensus 270 gpdP~~a~~~~qgLgw~~~c~~g~g~dt~tsGldG~Wt~tPt~fDN~YF~nLl~~~W~~~~sp~G~~qw~~~~~~~~~~~ 349 (726)
T PRK15061 270 GPEPEAAPIEEQGLGWKNSYGSGKGADTITSGLEGAWTTTPTQWDNGYFENLFGYEWELTKSPAGAWQWVPKDGAAEDTV 349 (726)
T ss_pred CCCCCcCHHHHHhccccccCCCCCCCCCccccCCCCCCCCcchhhHHHHHHHhhCcceeccCCCccccccccCccccccC
Confidence 889999999999985 8999632 222233344 69999999999999985
Q ss_pred -----------CCCcchhhhcccCcchHHHHHHhhhCHHHHHHHHHHHHHHhhc--CCCCCCC
Q 021171 254 -----------RGLLISDQALFNGGSTDGLVKTYSLNFKAFSADFANSMIKMGN--INVLTGN 303 (316)
Q Consensus 254 -----------~glL~SD~~L~~d~~t~~~V~~~A~d~~~F~~~Fa~Am~Km~~--lgv~tg~ 303 (316)
.+||+||++|..||+++++|++||.|+++|+++|++||.||++ +|+++--
T Consensus 350 pd~~~~~~~~~~~MLtSD~AL~~DP~~r~iV~~fA~d~~~F~~~FA~A~~KL~hrdmgp~~ry 412 (726)
T PRK15061 350 PDAHDPSKKHAPTMLTTDLALRFDPEYEKISRRFLENPEEFADAFARAWFKLTHRDMGPKSRY 412 (726)
T ss_pred CcccccccccCcccccccHHhhcCCcHHHHHHHHhcCHHHHHHHHHHHHHHHcccCCCchhhh
Confidence 5899999999999999999999999999999999999999954 6665543
No 14
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C-terminal do
Probab=100.00 E-value=1.9e-41 Score=316.15 Aligned_cols=222 Identities=18% Similarity=0.238 Sum_probs=180.6
Q ss_pred HHHHHHHHhccchhhhHHHHHhhccCC-------CCCCce-EeccCCCCCcccccCCCCCC--CchhHHHHHHHHHHHh-
Q 021171 41 RIVEAAVEKEGRMGASLLRLHFHDCFV-------QGCDAS-ILLDDTSTIDSEKNAIPNNN--SVRGFEVIDLIKKELD- 109 (316)
Q Consensus 41 ~~v~~~~~~d~~~aa~llRl~FHDc~v-------~GcDgS-ill~~~~~~~~E~~~~~N~~--~l~g~~~i~~iK~~le- 109 (316)
+.+++.+....-+.+.||||+||++.+ +|++|+ |.+ .+|++++.|.+ .-+.+.+++.||+++.
T Consensus 17 ~~lk~~i~~~gl~~~~lvrlAWhsAgTyr~sd~rGGaNGariRl------~pe~~w~~N~~~~L~~~~~~Le~ik~~~~~ 90 (297)
T cd08200 17 AALKAKILASGLTVSELVSTAWASASTFRNSDKRGGANGARIRL------APQKDWEVNEPEELAKVLAVLEGIQKEFNE 90 (297)
T ss_pred HHHHHHHHhcCCcHHHHHHHhhhccccccCCCCCCCCCcccccC------ccccCcCccCcHHHHHHHHHHHHHHHHhcc
Confidence 667778888888999999999999987 689998 655 57999999984 2247788888888774
Q ss_pred hhCCCCcccHhHHHHHhhhhHHhhcCC-----CCcccCCCCCCCCCcccccc--cCCCCCCC------------CCHHHH
Q 021171 110 KVCKRPVVSCADILAVAARDSVVALGG-----PTWKVPLGRRDSTTANRTLA--NNDIPSPF------------LNLTGL 170 (316)
Q Consensus 110 ~~cp~~~VScADiialAar~av~~~GG-----P~~~v~~GR~D~~~s~~~~~--~~~lP~p~------------~~~~~l 170 (316)
..-+++.||+||+|+||+.+|||.+|| |.|+|.+||.|...+..... ...+|.+. .+.++|
T Consensus 91 ~~~~~~~vS~ADLivLaG~vAiE~agg~ag~~p~Ipf~pGR~Da~~~~td~~sf~~l~P~adg~rny~~~~~~~~~~~~L 170 (297)
T cd08200 91 SQSGGKKVSLADLIVLGGCAAVEKAAKDAGVDIKVPFTPGRTDATQEQTDVESFEVLEPKADGFRNYLKKGYRVPPEEML 170 (297)
T ss_pred cccCCccccHHHHHHHHhHHHHHHHHhccCCCceeccCCCCCCcccCCCCcccccccCCCCcccccccccCCCCCHHHHH
Confidence 223344799999999999999999999 99999999999987643211 11345332 245789
Q ss_pred HHHHHHcCCCcccchhccCCc-cccccccccccccccCCCCCCHHHHHHHhhcCCCCCCCCCCCCCCCCCCccChHHHHH
Q 021171 171 ISSFRRQGLNETDLVALSGGH-TIGFARCSAFRNRIYNATNIDPDFAKERQRTCPSTGGDSNLAPFDPTPLTFDGKYFSS 249 (316)
Q Consensus 171 ~~~F~~~Gls~~e~VaLsGaH-tiG~~hc~~f~~Rl~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~Tp~~FDN~Yy~~ 249 (316)
++.|.++|||++|||||+||| ++|++|..++ . .+|..+|.+|||+||+|
T Consensus 171 rd~f~rlglsd~EmvaL~Gg~r~lG~~~~~s~---------------------------~---G~wT~~p~~f~N~fF~n 220 (297)
T cd08200 171 VDKAQLLTLTAPEMTVLVGGLRVLGANYGGSK---------------------------H---GVFTDRPGVLTNDFFVN 220 (297)
T ss_pred HHHHHhCCCChHHHhheecchhhcccCCCCCC---------------------------C---CCCcCCCCccccHHHHH
Confidence 999999999999999999998 7998885321 1 24556899999999999
Q ss_pred HhhcC--------------------C-----CcchhhhcccCcchHHHHHHhhhC--HHHHHHHHHHHHHHhhcCC
Q 021171 250 LLQKR--------------------G-----LLISDQALFNGGSTDGLVKTYSLN--FKAFSADFANSMIKMGNIN 298 (316)
Q Consensus 250 l~~~~--------------------g-----lL~SD~~L~~d~~t~~~V~~~A~d--~~~F~~~Fa~Am~Km~~lg 298 (316)
|++.. | ++++|.+|.+|++.|++|+.||.| +++||++|++||.||+++.
T Consensus 221 LLd~~~~W~~~~~~~~~~~~~dr~~g~~~~~~t~~Dl~l~sd~~~R~~ve~YA~dd~~~~F~~DF~~A~~Klmeld 296 (297)
T cd08200 221 LLDMSTEWKPADEDDGLFEGRDRKTGEVKWTATRVDLVFGSNSELRAVAEVYASDDAQEKFVKDFVAAWTKVMNLD 296 (297)
T ss_pred HhcccceeeecCCCCCceeeccCCCCceeeccChhhhhhccCHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhcC
Confidence 99521 1 268899999999999999999998 9999999999999999874
No 15
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=1.3e-35 Score=303.70 Aligned_cols=222 Identities=19% Similarity=0.238 Sum_probs=174.0
Q ss_pred HHHHHHHHHH---HHhccchhhhHHHHHhhccCC-------CCCCce-EeccCCCCCcccccCCCC--CCCchhHHHHHH
Q 021171 37 PTIKRIVEAA---VEKEGRMGASLLRLHFHDCFV-------QGCDAS-ILLDDTSTIDSEKNAIPN--NNSVRGFEVIDL 103 (316)
Q Consensus 37 ~~V~~~v~~~---~~~d~~~aa~llRl~FHDc~v-------~GcDgS-ill~~~~~~~~E~~~~~N--~~~l~g~~~i~~ 103 (316)
++|+++|.+. +....-..+.|||++||++.+ +|++|+ |.|. +|++++.| .+.-+.+++++.
T Consensus 428 ~~v~~di~~lk~~i~~sgl~~~~lVr~AWhsA~Tyr~sd~rGGaNGariRl~------pe~~w~~N~p~gL~~vl~~Le~ 501 (716)
T TIGR00198 428 TLSEGDIKELKQQILASGLSVSELVCTAWASASTFRSSDYRGGANGARIRLE------PQKNWPVNEPTRLAKVLAVLEK 501 (716)
T ss_pred hhHHHHHHHHHHHHHhcCCcHHHHHHHhhhhcccccCCCCCCCCCcceeecc------hhcCcccCCHHHHHHHHHHHHH
Confidence 3456665553 455667889999999999986 699998 7664 69999999 522235666666
Q ss_pred HHHHHhhhCCCCcccHhHHHHHhhhhHHhhc---CCC--CcccCCCCCCCCCcccccccCCCCC-C--------------
Q 021171 104 IKKELDKVCKRPVVSCADILAVAARDSVVAL---GGP--TWKVPLGRRDSTTANRTLANNDIPS-P-------------- 163 (316)
Q Consensus 104 iK~~le~~cp~~~VScADiialAar~av~~~---GGP--~~~v~~GR~D~~~s~~~~~~~~lP~-p-------------- 163 (316)
||++. |...||+||+|+||+.+|||.+ ||| .|+|.+||.|+..... ++++..|. |
T Consensus 502 Ik~~f----~~~~vS~ADLivLaG~vAVE~aa~~gG~~~~Vpf~pGR~Da~~~~t-d~~~~~~l~p~adgfRn~~~~~~~ 576 (716)
T TIGR00198 502 IQAEF----AKGPVSLADLIVLGGGAAVEKAALDAGISVNVPFLPGRVDATQAMT-DAESFTPLEPIADGFRNYLKRDYA 576 (716)
T ss_pred HHHHc----CCCcccHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCccccCCC-CccccccCCCCCcccchhcccccc
Confidence 66655 4226999999999999999988 898 5799999999987653 22222221 1
Q ss_pred CCCHHHHHHHHHHcCCCcccchhccCCc-cccccccccccccccCCCCCCHHHHHHHhhcCCCCCCCCCCCCCCCCCCcc
Q 021171 164 FLNLTGLISSFRRQGLNETDLVALSGGH-TIGFARCSAFRNRIYNATNIDPDFAKERQRTCPSTGGDSNLAPFDPTPLTF 242 (316)
Q Consensus 164 ~~~~~~l~~~F~~~Gls~~e~VaLsGaH-tiG~~hc~~f~~Rl~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~Tp~~F 242 (316)
....+.|++.|.++|||++|||||+||| ++|++|..++ . .+|..+|.+|
T Consensus 577 ~~~~~~l~d~a~~lglt~~EmvaL~Gg~r~lG~~~~~s~---------------------------~---G~~T~~p~~f 626 (716)
T TIGR00198 577 VTPEELLLDKAQLLTLTAPEMTVLIGGMRVLGANHGGSK---------------------------H---GVFTDRVGVL 626 (716)
T ss_pred CCHHHHHHHHHHhCCCChHHHHheecchhhccccCCCCC---------------------------C---CCCcCCCCcc
Confidence 2245678999999999999999999995 9999995321 1 2455689999
Q ss_pred ChHHHHHHhhcC--------------------C---C--cchhhhcccCcchHHHHHHhhhCH--HHHHHHHHHHHHHhh
Q 021171 243 DGKYFSSLLQKR--------------------G---L--LISDQALFNGGSTDGLVKTYSLNF--KAFSADFANSMIKMG 295 (316)
Q Consensus 243 DN~Yy~~l~~~~--------------------g---l--L~SD~~L~~d~~t~~~V~~~A~d~--~~F~~~Fa~Am~Km~ 295 (316)
||+||+||++.. | + ..+|.+|.+|++.|++|+.||+|+ ++||++|++||.|++
T Consensus 627 ~NdfF~~LLd~~~~w~~~~~~~~~~~~~dr~tg~~~~~~t~~Dl~~~sd~~lra~aE~YA~dd~~~~F~~DF~~Aw~Klm 706 (716)
T TIGR00198 627 SNDFFVNLLDMAYEWRAADNNRYLFEGGDRQTGEVKWTATRVDLVFGSNSILRAVAEVYAQDDAREKFVKDFVAAWTKVM 706 (716)
T ss_pred ccHHHHHHhcCCceeeecCCCCceeeeecCCCCceeeccChhheeeccCHHHHHHHHHHhcccccchHHHHHHHHHHHHH
Confidence 999999999721 2 2 278999999999999999999997 999999999999999
Q ss_pred cCCC
Q 021171 296 NINV 299 (316)
Q Consensus 296 ~lgv 299 (316)
+++-
T Consensus 707 ~ldr 710 (716)
T TIGR00198 707 NLDR 710 (716)
T ss_pred hCCC
Confidence 9874
No 16
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=2.2e-35 Score=300.63 Aligned_cols=223 Identities=19% Similarity=0.251 Sum_probs=181.1
Q ss_pred HHHHHHHHhccchhhhHHHHHhhccCC-------CCCCce-EeccCCCCCcccccCCCCC--CCchhHHHHHHHHHHHhh
Q 021171 41 RIVEAAVEKEGRMGASLLRLHFHDCFV-------QGCDAS-ILLDDTSTIDSEKNAIPNN--NSVRGFEVIDLIKKELDK 110 (316)
Q Consensus 41 ~~v~~~~~~d~~~aa~llRl~FHDc~v-------~GcDgS-ill~~~~~~~~E~~~~~N~--~~l~g~~~i~~iK~~le~ 110 (316)
..+++.+....-..+.|||++||++.+ +|++|+ |.|. +|++++.|. +.-+.+++++.||++...
T Consensus 442 ~~lk~~i~~~gl~~~~LVr~AWhsA~Tyr~sd~rGGaNGarIRl~------Pq~~w~~N~p~~L~~vl~~LE~Ik~~f~~ 515 (726)
T PRK15061 442 AALKAKILASGLSVSELVSTAWASASTFRGSDKRGGANGARIRLA------PQKDWEVNEPAQLAKVLAVLEGIQAEFNA 515 (726)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHhhcccccCCCCCCCCCccceecc------cccCccccCHHHHHHHHHHHHHHHHHHhh
Confidence 467777777778899999999999986 699998 7664 699999997 333478899999998854
Q ss_pred h-CCCCcccHhHHHHHhhhhHHhhc---CC--CCcccCCCCCCCCCcccccc--cCCCCCCC------------CCHHHH
Q 021171 111 V-CKRPVVSCADILAVAARDSVVAL---GG--PTWKVPLGRRDSTTANRTLA--NNDIPSPF------------LNLTGL 170 (316)
Q Consensus 111 ~-cp~~~VScADiialAar~av~~~---GG--P~~~v~~GR~D~~~s~~~~~--~~~lP~p~------------~~~~~l 170 (316)
. ..++.||+||+|+||+.+|||.+ || |.|+|.+||.|+........ ...+|.+. ...+.|
T Consensus 516 ~~~~~~~vS~ADLivLaG~vAIE~aa~~aG~~~~VPf~pGR~Da~~~~td~esf~~l~P~Adgfrny~~~~~~~~~e~~L 595 (726)
T PRK15061 516 AQSGGKKVSLADLIVLGGNAAVEQAAKAAGHDVTVPFTPGRTDATQEQTDVESFAVLEPKADGFRNYLKKGYSVSPEELL 595 (726)
T ss_pred ccCCCCceeHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCCcccCCCCcccccccCCCCccccccccccCCCCHHHHH
Confidence 3 23347999999999999999988 68 99999999999987643221 12456543 234789
Q ss_pred HHHHHHcCCCcccchhccCCc-cccccccccccccccCCCCCCHHHHHHHhhcCCCCCCCCCCCCCCCCCCccChHHHHH
Q 021171 171 ISSFRRQGLNETDLVALSGGH-TIGFARCSAFRNRIYNATNIDPDFAKERQRTCPSTGGDSNLAPFDPTPLTFDGKYFSS 249 (316)
Q Consensus 171 ~~~F~~~Gls~~e~VaLsGaH-tiG~~hc~~f~~Rl~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~Tp~~FDN~Yy~~ 249 (316)
++.|.++|||++|||||+||| ++|.+|..++ . .+|..+|.+|||+||+|
T Consensus 596 ~d~a~~lglt~~EmvaL~Gg~r~Lg~~~~~S~---------------------------~---G~~T~~p~~fsNdfFvn 645 (726)
T PRK15061 596 VDKAQLLTLTAPEMTVLVGGLRVLGANYGGSK---------------------------H---GVFTDRPGVLTNDFFVN 645 (726)
T ss_pred HHHHHhCCCChHHHhheecchhhcccCCCCCC---------------------------C---CCCcCCCCccccHHHHH
Confidence 999999999999999999997 7898884321 1 23456899999999999
Q ss_pred HhhcC--------------------C---C--cchhhhcccCcchHHHHHHhhhC--HHHHHHHHHHHHHHhhcCCC
Q 021171 250 LLQKR--------------------G---L--LISDQALFNGGSTDGLVKTYSLN--FKAFSADFANSMIKMGNINV 299 (316)
Q Consensus 250 l~~~~--------------------g---l--L~SD~~L~~d~~t~~~V~~~A~d--~~~F~~~Fa~Am~Km~~lgv 299 (316)
|++.. | + +.+|.+|.+|++.|++|+.||.| +++||++|++||.|+++++-
T Consensus 646 LLdm~~~W~~~~~~~~~ye~~Dr~tg~~~~~~t~~Dlvfgsds~lRa~aEvYA~dd~~~kF~~DF~~Aw~Kvmeldr 722 (726)
T PRK15061 646 LLDMGTEWKPTDEDEEVYEGRDRKTGEVKWTATRVDLVFGSNSQLRALAEVYASDDAKEKFVRDFVAAWTKVMNLDR 722 (726)
T ss_pred HhcCCceeeecCCCCCceeeccCCCcceeeccChhheecccCHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCCC
Confidence 99521 1 1 47899999999999999999999 99999999999999999873
No 17
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.97 E-value=1.4e-30 Score=254.89 Aligned_cols=253 Identities=21% Similarity=0.300 Sum_probs=196.9
Q ss_pred HHHHHHHHHHHhc--------cchhhhHHHHHhhccCCC----CCCceEeccCCCCCcccccCCCCCCCchhHHHHHHHH
Q 021171 38 TIKRIVEAAVEKE--------GRMGASLLRLHFHDCFVQ----GCDASILLDDTSTIDSEKNAIPNNNSVRGFEVIDLIK 105 (316)
Q Consensus 38 ~V~~~v~~~~~~d--------~~~aa~llRl~FHDc~v~----GcDgSill~~~~~~~~E~~~~~N~~~l~g~~~i~~iK 105 (316)
.|++.+...+... ....|.+|||+||-+.++ |-.|+- .+.-+|.++.++|.|.+.-+++.++..||
T Consensus 71 Avk~Dl~aLmtdSqdWWPAD~GhYGplfIRmAWHsAGTYRi~DGRGGa~--~G~qRFaPlnSWPDN~nLDKarRLLWPIK 148 (730)
T COG0376 71 AVKRDLKALMTDSQDWWPADFGHYGPLFIRMAWHSAGTYRIGDGRGGAG--GGQQRFAPLNSWPDNANLDKARRLLWPIK 148 (730)
T ss_pred HHHHHHHHHhhcccccCcccccccccceeeeeecccCceecccCCCCCC--CCceecccccCCCcccchHHHHHHhhhHh
Confidence 5566666666543 358999999999999872 211110 11235678999999995556899999998
Q ss_pred HHHhhhCCCCcccHhHHHHHhhhhHHhhcCCCCcccCCCCCCCCCccc--------------------------------
Q 021171 106 KELDKVCKRPVVSCADILAVAARDSVVALGGPTWKVPLGRRDSTTANR-------------------------------- 153 (316)
Q Consensus 106 ~~le~~cp~~~VScADiialAar~av~~~GGP~~~v~~GR~D~~~s~~-------------------------------- 153 (316)
+++ +. .+|+||+|+|++.+|++.+|++.+.+..||.|-..+..
T Consensus 149 kKY----G~-kiSWaDL~iLaGnvAlEsMGfktfGFa~GR~D~wepd~dvyWG~e~~wl~d~Ry~~~~~Le~PlaavqMG 223 (730)
T COG0376 149 KKY----GR-KISWADLIILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGSEKTWLGDERYSGDRDLENPLAAVQMG 223 (730)
T ss_pred Hhh----cc-cccHhHhhhhhchhhhhhcCCccccccCCCCcCCCCccccccCccccccccccccccccccCchhhheee
Confidence 766 44 89999999999999999999999999999999877654
Q ss_pred ------ccccCCCCCCCCCHHHHHHHHHHcCCCcccchhcc-CCccccccccccccccccCCCCCCHHHHHHHh--hcCC
Q 021171 154 ------TLANNDIPSPFLNLTGLISSFRRQGLNETDLVALS-GGHTIGFARCSAFRNRIYNATNIDPDFAKERQ--RTCP 224 (316)
Q Consensus 154 ------~~~~~~lP~p~~~~~~l~~~F~~~Gls~~e~VaLs-GaHtiG~~hc~~f~~Rl~~dp~~d~~~~~~L~--~~Cp 224 (316)
.+ ++..|+|-.+..+++..|++|+++++|.|||+ ||||+|++|...-.+.+-.+|.--+--.+.|- ++|.
T Consensus 224 LIYVNPEG-png~PDpl~aA~dIRetFaRMaMNDeETVALiaGGHtfGKtHGag~a~~vg~ePe~a~ie~qGlGW~~~~g 302 (730)
T COG0376 224 LIYVNPEG-PNGNPDPLAAARDIRETFARMAMNDEETVALIAGGHTFGKTHGAGPASNVGPEPEAAPIEQQGLGWANTYG 302 (730)
T ss_pred eEEeCCCC-CCCCCChhhhHHHHHHHHHHhcCCcHhhhhhhhcccccccccCCCchhhcCCCccccchhhhccccccccC
Confidence 22 34689999999999999999999999999997 69999999986644444446654444444443 3343
Q ss_pred CC-CCC----CCCCCCCCCCCccChHHHHHHhhcC-----------------------------------CCcchhhhcc
Q 021171 225 ST-GGD----SNLAPFDPTPLTFDGKYFSSLLQKR-----------------------------------GLLISDQALF 264 (316)
Q Consensus 225 ~~-~~~----~~~~~~D~Tp~~FDN~Yy~~l~~~~-----------------------------------glL~SD~~L~ 264 (316)
.+ |.+ +--+.|..||++|||+||.+|+... .||++|.+|.
T Consensus 303 ~G~G~dtitsGlE~~Wt~tPT~w~n~ff~~Lf~yEWeltksPAGa~Qw~~k~~~~~~~pd~~dp~~~~~p~MlttDlaLr 382 (730)
T COG0376 303 SGKGPDTITSGLEGAWTTTPTQWSNEFFENLFNYEWELTKSPAGAWQWDAKSAAAETIPDAHDPSKKHGPMMLTTDLALR 382 (730)
T ss_pred CCcCcccccccccccCCCCcchhhhHHHHHHhccceeeecCCCccccccccCccccCCCCCCCcccccCceeeccchhhh
Confidence 32 111 1134566799999999999999632 4899999999
Q ss_pred cCcchHHHHHHhhhCHHHHHHHHHHHHHHhhcCC
Q 021171 265 NGGSTDGLVKTYSLNFKAFSADFANSMIKMGNIN 298 (316)
Q Consensus 265 ~d~~t~~~V~~~A~d~~~F~~~Fa~Am~Km~~lg 298 (316)
-||..+++.++|..|++.|.+.|++||-||..-.
T Consensus 383 ~DP~Y~kIs~rf~e~pd~F~~~FArAWfKLtHRD 416 (730)
T COG0376 383 FDPEYEKISRRFLEDPDEFADAFARAWFKLTHRD 416 (730)
T ss_pred cChHHHHHHHHHHhCHHHHHHHHHHHHHHHhhcc
Confidence 9999999999999999999999999999997643
No 18
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.53 E-value=9.2e-14 Score=137.41 Aligned_cols=217 Identities=19% Similarity=0.291 Sum_probs=157.8
Q ss_pred HHHHHHHHhccchhhhHHHHHhhccCC-------CCCCce-EeccCCCCCcccccCCCCCCC-c-hhHHHHHHHHHHHhh
Q 021171 41 RIVEAAVEKEGRMGASLLRLHFHDCFV-------QGCDAS-ILLDDTSTIDSEKNAIPNNNS-V-RGFEVIDLIKKELDK 110 (316)
Q Consensus 41 ~~v~~~~~~d~~~aa~llRl~FHDc~v-------~GcDgS-ill~~~~~~~~E~~~~~N~~~-l-~g~~~i~~iK~~le~ 110 (316)
..++..+....-....|+-.+|-.+.+ +|.+|. |.|. +.|+++.|... | +-+.+++.|.+...
T Consensus 452 ~~lK~~IlasgLsvs~lVstAWaSAsTfRgsDkRGGaNGaRirLa------PqkdWevN~P~~l~kvl~~le~iq~~fn- 524 (730)
T COG0376 452 AALKAKILASGLSVSQLVSTAWASASTFRGSDKRGGANGARIRLA------PQKDWEVNQPAELAKVLAVLEKIQKEFN- 524 (730)
T ss_pred HHHHHHHHHccCCHHHHHHHHHHhhhhccCCcccCCcCcceEeec------ccccCCCCCHHHHHHHHHHHHHHHHHhc-
Confidence 356677777777889999999998875 577776 6664 58999999631 2 35677777777765
Q ss_pred hCCCCcccHhHHHHHhhhhHHhh---cCCCC--cccCCCCCCCCCcccccccCCCCCCC--------------CCHHHHH
Q 021171 111 VCKRPVVSCADILAVAARDSVVA---LGGPT--WKVPLGRRDSTTANRTLANNDIPSPF--------------LNLTGLI 171 (316)
Q Consensus 111 ~cp~~~VScADiialAar~av~~---~GGP~--~~v~~GR~D~~~s~~~~~~~~lP~p~--------------~~~~~l~ 171 (316)
+.||.||+|+|++..|||. .+|-. +++.+||.|+...........+-.|. .+-.-|+
T Consensus 525 ----kkvSlADlIVL~G~a~ie~AAk~aG~~v~VPF~pGR~DA~qeqtDv~sf~~LeP~aDGfRNy~~~~~~~~pe~~Lv 600 (730)
T COG0376 525 ----KKVSLADLIVLGGNAAVEKAAKAAGFSVTVPFAPGRTDASQEQTDVESFAVLEPIADGFRNYVKKDYVLTPEELLV 600 (730)
T ss_pred ----CccchhHheeecchHHHHHHHHhcCceeeeccCCCCcccchhhcchhhhhcccccchhhhhhccCCCcCCHHHHHH
Confidence 2799999999999999985 46655 56779999998765432111111121 2234577
Q ss_pred HHHHHcCCCcccchhccCCc-cccccccccccccccCCCCCCHHHHHHHhhcCCCCCCCCCCCCCCCCCCccChHHHHHH
Q 021171 172 SSFRRQGLNETDLVALSGGH-TIGFARCSAFRNRIYNATNIDPDFAKERQRTCPSTGGDSNLAPFDPTPLTFDGKYFSSL 250 (316)
Q Consensus 172 ~~F~~~Gls~~e~VaLsGaH-tiG~~hc~~f~~Rl~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~Tp~~FDN~Yy~~l 250 (316)
+.-+-.+||..||++|+||- .+|..+..+ ....|...|..+.|.||.||
T Consensus 601 DkAqlL~LtapemtVLiGGlRvLg~n~g~s------------------------------~~GVfT~~pg~LtndFFvnL 650 (730)
T COG0376 601 DKAQLLTLTAPEMTVLIGGLRVLGANYGGS------------------------------KHGVFTDRPGVLTNDFFVNL 650 (730)
T ss_pred HHHHHhccCCccceEEEcceEeeccCCCCC------------------------------ccceeccCcccccchhhhhh
Confidence 88888999999999999986 445433211 11123346788889999998
Q ss_pred hhcC--------------------CC-----cchhhhcccCcchHHHHHHhhhC--HHHHHHHHHHHHHHhhcCC
Q 021171 251 LQKR--------------------GL-----LISDQALFNGGSTDGLVKTYSLN--FKAFSADFANSMIKMGNIN 298 (316)
Q Consensus 251 ~~~~--------------------gl-----L~SD~~L~~d~~t~~~V~~~A~d--~~~F~~~Fa~Am~Km~~lg 298 (316)
++.. |- -..|..+-+++..|.+.+-||.| +++|.++|..||.|.+++.
T Consensus 651 lDM~~~W~~~~~~~~~feg~DrktG~~kwt~trvDLvfGsns~LRA~aEVYa~dda~ekFv~DFvaaw~kVMn~D 725 (730)
T COG0376 651 LDMGTEWKPTDDARGLFEGRDRKTGEVKWTATRVDLVFGSNSELRALAEVYASDDAKEKFVKDFVAAWTKVMNLD 725 (730)
T ss_pred hhccceeeeccccccceeccccccCceEeeeeEEeEEecCcHHHHHHHHHHhccchHHHHHHHHHHHHHHHhccc
Confidence 8632 21 35788888899999999999975 8999999999999999875
No 19
>PTZ00411 transaldolase-like protein; Provisional
Probab=87.20 E-value=3.9 Score=39.86 Aligned_cols=148 Identities=13% Similarity=0.182 Sum_probs=77.3
Q ss_pred ccHhHHHHHhhhhHHh--hcCCCCcccCCCCCCCCCcccccccCCCCCCC---CCHHHHHHHHHHcCCCc----------
Q 021171 117 VSCADILAVAARDSVV--ALGGPTWKVPLGRRDSTTANRTLANNDIPSPF---LNLTGLISSFRRQGLNE---------- 181 (316)
Q Consensus 117 VScADiialAar~av~--~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~---~~~~~l~~~F~~~Gls~---------- 181 (316)
|.|-=.+.+....|+. .+|-..+..+.||.+...-.+.......+... ..+.++...|++.|+..
T Consensus 161 I~~N~TlvFS~~QA~aaaeAGa~~ISPfVGRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~~~~k~~g~~T~Im~ASfRn~ 240 (333)
T PTZ00411 161 IHCNLTLLFSFAQAVACAQAGVTLISPFVGRILDWYKKPEKAESYVGAQDPGVISVTKIYNYYKKHGYKTIVMGASFRNT 240 (333)
T ss_pred CceeEeEecCHHHHHHHHHcCCCEEEeecchHHHhcccccccccccccCCchHHHHHHHHHHHHHcCCCeEEEecccCCH
Confidence 3333333444443333 46778899999998654322211111112122 35677888888888754
Q ss_pred ccchhccCCccccccccccccccccCCCCCCHHHHHHHhhcC-CCCC---CCCCCCCCCCCCCccChHHHHHHhhcCCCc
Q 021171 182 TDLVALSGGHTIGFARCSAFRNRIYNATNIDPDFAKERQRTC-PSTG---GDSNLAPFDPTPLTFDGKYFSSLLQKRGLL 257 (316)
Q Consensus 182 ~e~VaLsGaHtiG~~hc~~f~~Rl~~dp~~d~~~~~~L~~~C-p~~~---~~~~~~~~D~Tp~~FDN~Yy~~l~~~~glL 257 (316)
+|+..|.|+|.+ |++|...++|...- ..-. .+......+..+..+|...|+-.++..+|=
T Consensus 241 ~qi~~laG~D~l----------------Ti~p~ll~~L~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~fr~~~~~d~ma 304 (333)
T PTZ00411 241 GEILELAGCDKL----------------TISPKLLEELANTEDGPVERKLDPEKLTEDTEKLPELTEKEFRWELNEDAMA 304 (333)
T ss_pred HHHHHHHCCCEE----------------eCCHHHHHHHHhCCCcccCcccCcccccccccccCCCCHHHHHHHhCCCcch
Confidence 455556666543 57777777776532 2100 011111111234567888887554433321
Q ss_pred chhhhcccCcchHHHHHHhhhCHHHHHHHHH
Q 021171 258 ISDQALFNGGSTDGLVKTYSLNFKAFSADFA 288 (316)
Q Consensus 258 ~SD~~L~~d~~t~~~V~~~A~d~~~F~~~Fa 288 (316)
. .++..-++.|+.|+....+-..
T Consensus 305 ~--------ekl~~gir~F~~d~~~Le~~i~ 327 (333)
T PTZ00411 305 T--------EKLAEGIRNFAKDLEKLENVIR 327 (333)
T ss_pred H--------HHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1344667888888766655443
No 20
>TIGR00874 talAB transaldolase. This family includes the majority of known and predicted transaldolase sequences, including E. coli TalA and TalB. It excluded two other families. The first includes E. coli transaldolase-like protein TalC. The second family includes the putative transaldolases of Helicobacter pylori and Mycobacterium tuberculosis.
Probab=78.66 E-value=14 Score=35.86 Aligned_cols=130 Identities=12% Similarity=0.166 Sum_probs=70.1
Q ss_pred hhcCCCCcccCCCCCCCCCcccccccCCCC----CCCCCHHHHHHHHHHcCCCcccc----------hhccCCccccccc
Q 021171 132 VALGGPTWKVPLGRRDSTTANRTLANNDIP----SPFLNLTGLISSFRRQGLNETDL----------VALSGGHTIGFAR 197 (316)
Q Consensus 132 ~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP----~p~~~~~~l~~~F~~~Gls~~e~----------VaLsGaHtiG~~h 197 (316)
..+|-..+..+.||.|-..-...+.. ..+ ++-..+.++.+.|++.|+..+=| .+|.|+|.+
T Consensus 166 a~AGa~~ISPFVgRi~dw~~~~~g~~-~~~~~~d~Gv~~v~~i~~~~k~~g~~T~Im~ASfRn~~qv~~laG~d~~---- 240 (317)
T TIGR00874 166 AEAKVTLISPFVGRILDWYKAATGKK-EYSIEEDPGVASVKKIYNYYKKHGYPTEVMGASFRNKEEILALAGCDRL---- 240 (317)
T ss_pred HHcCCCEEEeecchHhHhhhhccCcc-ccccccCchHHHHHHHHHHHHHcCCCcEEEeeccCCHHHHHHHHCCCeE----
Confidence 35688889999999876322111000 111 12345777888898989865433 333343322
Q ss_pred cccccccccCCCCCCHHHHHHHhhcCCC-CC--CCCCCCCCCCCCCccChHHHHHHhhcCCCcchhhhcccCcchHHHHH
Q 021171 198 CSAFRNRIYNATNIDPDFAKERQRTCPS-TG--GDSNLAPFDPTPLTFDGKYFSSLLQKRGLLISDQALFNGGSTDGLVK 274 (316)
Q Consensus 198 c~~f~~Rl~~dp~~d~~~~~~L~~~Cp~-~~--~~~~~~~~D~Tp~~FDN~Yy~~l~~~~glL~SD~~L~~d~~t~~~V~ 274 (316)
|++|...++|...-.. .. ........+..|..+|...|+-.++..+|=. .++..-++
T Consensus 241 ------------Ti~p~ll~~L~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~fr~~~~~d~ma~--------ekl~~gir 300 (317)
T TIGR00874 241 ------------TISPALLDELKESTGPVERKLDPESAKKVDKQPIILDESEFRFLHNEDAMAT--------EKLAEGIR 300 (317)
T ss_pred ------------eCCHHHHHHHHhCCCCcCccCCccccccccccCCCCCHHHHHHHhCCCcchH--------HHHHHHHH
Confidence 6788888888654211 00 0001111112346678888875554433211 13456677
Q ss_pred HhhhCHHHHHHH
Q 021171 275 TYSLNFKAFSAD 286 (316)
Q Consensus 275 ~~A~d~~~F~~~ 286 (316)
.|+.|+....+-
T Consensus 301 ~F~~d~~~Le~~ 312 (317)
T TIGR00874 301 KFAADQEKLEKL 312 (317)
T ss_pred HHHHHHHHHHHH
Confidence 888777665443
No 21
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=78.36 E-value=14 Score=36.75 Aligned_cols=119 Identities=15% Similarity=0.245 Sum_probs=63.5
Q ss_pred ccHhHHHHHhhhhHHh--hcCCCCcccCCCCCCCCCcccccccCCCCCCC----CCHHHHHHHHHHcCCCcc--------
Q 021171 117 VSCADILAVAARDSVV--ALGGPTWKVPLGRRDSTTANRTLANNDIPSPF----LNLTGLISSFRRQGLNET-------- 182 (316)
Q Consensus 117 VScADiialAar~av~--~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~----~~~~~l~~~F~~~Gls~~-------- 182 (316)
|.|-=.+.+....|+. .+|-..+..+.||.|...-...+ ...+|... ..+.++.+.|++.|+..+
T Consensus 155 I~~n~TlvFS~~QA~aaaeAGa~~ISPfVgRi~dw~~~~~g-~~~~~~~~dpGv~~v~~i~~~~~~~~~~T~Im~ASfRn 233 (391)
T PRK12309 155 IHCNLTLLFGFHQAIACAEAGVTLISPFVGRILDWYKKETG-RDSYPGAEDPGVQSVTQIYNYYKKFGYKTEVMGASFRN 233 (391)
T ss_pred CceeeeeecCHHHHHHHHHcCCCEEEeecchhhhhhhhccC-CCccccccchHHHHHHHHHHHHHhcCCCcEEEecccCC
Confidence 4444444444444443 56888899999998774322111 01244332 247778888888887543
Q ss_pred --cchhccCCccccccccccccccccCCCCCCHHHHHHHhhcCCC---CCCCCCCCCCCCCCCccChHHHHHHhh
Q 021171 183 --DLVALSGGHTIGFARCSAFRNRIYNATNIDPDFAKERQRTCPS---TGGDSNLAPFDPTPLTFDGKYFSSLLQ 252 (316)
Q Consensus 183 --e~VaLsGaHtiG~~hc~~f~~Rl~~dp~~d~~~~~~L~~~Cp~---~~~~~~~~~~D~Tp~~FDN~Yy~~l~~ 252 (316)
++..|.|+|.+ |++|...++|...-.. .-.+......+..|..+|..=|+-.++
T Consensus 234 ~~~v~~laG~d~~----------------Ti~p~ll~~L~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~f~~~~~ 292 (391)
T PRK12309 234 IGEIIELAGCDLL----------------TISPKLLEQLRSTEAELPRKLDPANAAGMEIEKIHMDRATFDKMHA 292 (391)
T ss_pred HHHHHHHHCCCee----------------eCCHHHHHHHHhcCCCcCcccChhhccccccccCCCCHHHHHHHhc
Confidence 33444444422 6788888888763110 000111111123445678776765554
No 22
>PRK05269 transaldolase B; Provisional
Probab=76.75 E-value=9.8 Score=36.89 Aligned_cols=146 Identities=11% Similarity=0.135 Sum_probs=75.0
Q ss_pred ccHhHHHHHhhhhHH--hhcCCCCcccCCCCCCCCCcccccccCCCC---CCCCCHHHHHHHHHHcCCCcccch------
Q 021171 117 VSCADILAVAARDSV--VALGGPTWKVPLGRRDSTTANRTLANNDIP---SPFLNLTGLISSFRRQGLNETDLV------ 185 (316)
Q Consensus 117 VScADiialAar~av--~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP---~p~~~~~~l~~~F~~~Gls~~e~V------ 185 (316)
|+|-=-+.+....|+ ..+|-..+..+.||.|...-...+....-+ ++-..+.++.+.|++.|+..+-|.
T Consensus 151 I~vn~TlvFs~~Qa~~aa~AGa~~ISPfVgRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~~~~k~~~~~t~im~ASfrn~ 230 (318)
T PRK05269 151 INCNLTLLFSFAQARACAEAGVFLISPFVGRILDWYKKNTGKKEYAPAEDPGVVSVTKIYNYYKKHGYKTVVMGASFRNT 230 (318)
T ss_pred CceeEeEecCHHHHHHHHHcCCCEEEeeccHHHHHhhhcccccccCcCCCcHHHHHHHHHHHHHHcCCCceEEeeccCCH
Confidence 443333334433333 356888899999999854221110000111 123457788889999998765333
Q ss_pred ----hccCCccccccccccccccccCCCCCCHHHHHHHhhcC-CCCC-CCCCCCCCCCCCCccChHHHHHHhhcCCCcch
Q 021171 186 ----ALSGGHTIGFARCSAFRNRIYNATNIDPDFAKERQRTC-PSTG-GDSNLAPFDPTPLTFDGKYFSSLLQKRGLLIS 259 (316)
Q Consensus 186 ----aLsGaHtiG~~hc~~f~~Rl~~dp~~d~~~~~~L~~~C-p~~~-~~~~~~~~D~Tp~~FDN~Yy~~l~~~~glL~S 259 (316)
+|.|+|++ |++|...++|...- +... -+.. .+-...+..+|...|+..++..++
T Consensus 231 ~~v~~laG~d~v----------------Ti~p~ll~~l~~~~~~~~~~l~~~-~~~~~~~~~~~e~~f~~~~~~d~m--- 290 (318)
T PRK05269 231 GQILELAGCDRL----------------TISPALLEELAASEGELERKLSPP-GEAKARPVPLTEAEFRWQHNEDAM--- 290 (318)
T ss_pred HHHHHHhCCCeE----------------ECCHHHHHHHHhcCCCccccCCCc-cccccccccCCHHHHHHHhCcccc---
Confidence 33333322 67888888887432 2100 0000 000123556788877765544332
Q ss_pred hhhcccCcchHHHHHHhhhCHHHHHHHH
Q 021171 260 DQALFNGGSTDGLVKTYSLNFKAFSADF 287 (316)
Q Consensus 260 D~~L~~d~~t~~~V~~~A~d~~~F~~~F 287 (316)
.......-++.|+.|++...+-+
T Consensus 291 -----a~ekl~egi~~F~~~~~~L~~~i 313 (318)
T PRK05269 291 -----ATEKLAEGIRKFAKDQEKLEKLI 313 (318)
T ss_pred -----hHHHHHHHHHHHHHHHHHHHHHH
Confidence 11234566777777766555443
No 23
>PRK12346 transaldolase A; Provisional
Probab=75.07 E-value=11 Score=36.56 Aligned_cols=144 Identities=13% Similarity=0.162 Sum_probs=76.4
Q ss_pred ccHhHHHHHhhhhHHh--hcCCCCcccCCCCCCCCCcccccccCCCCC-C---CCCHHHHHHHHHHcCCCc---------
Q 021171 117 VSCADILAVAARDSVV--ALGGPTWKVPLGRRDSTTANRTLANNDIPS-P---FLNLTGLISSFRRQGLNE--------- 181 (316)
Q Consensus 117 VScADiialAar~av~--~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~-p---~~~~~~l~~~F~~~Gls~--------- 181 (316)
|+|-=.+.+....|+. .+|-..+..+.||.|......... ..++. . -..+.++.+.|++.|+..
T Consensus 150 I~~n~TliFS~~Qa~~aa~AGa~~ISPfVgRi~d~~~~~~~~-~~~~~~~~~Gv~~v~~i~~~~k~~~~~T~Vm~ASfRn 228 (316)
T PRK12346 150 INCNLTLLFSFAQARACAEAGVFLISPFVGRIYDWYQARKPM-DPYVVEEDPGVKSVRNIYDYYKQHRYETIVMGASFRR 228 (316)
T ss_pred CceeEEEecCHHHHHHHHHcCCCEEEecccHHHHhhhhcccc-ccccccCCChHHHHHHHHHHHHHcCCCcEEEecccCC
Confidence 5554444555554443 578888999999998643221110 11211 1 235677888888888754
Q ss_pred -ccchhccCCccccccccccccccccCCCCCCHHHHHHHhhcCCCCC---CCCCCCCCCCCCCccChHHHHHHhhcCCCc
Q 021171 182 -TDLVALSGGHTIGFARCSAFRNRIYNATNIDPDFAKERQRTCPSTG---GDSNLAPFDPTPLTFDGKYFSSLLQKRGLL 257 (316)
Q Consensus 182 -~e~VaLsGaHtiG~~hc~~f~~Rl~~dp~~d~~~~~~L~~~Cp~~~---~~~~~~~~D~Tp~~FDN~Yy~~l~~~~glL 257 (316)
+|+.+|.|+|.+ |++|...++|...-..-. .+..... ..|..+|..=|+-.+
T Consensus 229 ~~qi~alaG~d~l----------------Ti~p~ll~~L~~~~~~~~~~l~~~~~~~--~~~~~~~e~~fr~~~------ 284 (316)
T PRK12346 229 TEQILALAGCDRL----------------TISPNLLKELQESESPVERKLIPSSQTF--PRPAPMSEAEFRWEH------ 284 (316)
T ss_pred HHHHHHHhCCCEE----------------eCCHHHHHHHHhcCCCcccccChhhhcc--cCCCCCCHHHHHHHh------
Confidence 445555555533 577888888865421100 0000010 124566766665322
Q ss_pred chhhhcccCcchHHHHHHhhhCHHHHHHHH
Q 021171 258 ISDQALFNGGSTDGLVKTYSLNFKAFSADF 287 (316)
Q Consensus 258 ~SD~~L~~d~~t~~~V~~~A~d~~~F~~~F 287 (316)
..|. +.. .+..+=++.|+.|+....+-+
T Consensus 285 ~~d~-mA~-ekl~eGIr~F~~d~~~Le~~i 312 (316)
T PRK12346 285 NQDA-MAV-EKLSEGIRLFAVDQRKLEDLL 312 (316)
T ss_pred CcCH-hHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 2221 111 125566788888877665544
No 24
>cd00957 Transaldolase_TalAB Transaldolases including both TalA and TalB. The enzyme catalyses the reversible transfer of a dyhydroxyacetone moiety, derived from fructose-6-phosphate to erythrose-4-phosphate yielding sedoheptulose-7-phosphate and glyceraldehyde-3-phosphate. The catalytic mechanism is similar to other class I aldolases. The enzyme is found in the non-oxidative branch of the pentose phosphate pathway and forms a dimer in solution.
Probab=70.07 E-value=11 Score=36.46 Aligned_cols=141 Identities=13% Similarity=0.189 Sum_probs=71.2
Q ss_pred ccHhHHHHHhhhhHHh--hcCCCCcccCCCCCCCCCcccccccCCCCC----CCCCHHHHHHHHHHcCCCcccc------
Q 021171 117 VSCADILAVAARDSVV--ALGGPTWKVPLGRRDSTTANRTLANNDIPS----PFLNLTGLISSFRRQGLNETDL------ 184 (316)
Q Consensus 117 VScADiialAar~av~--~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~----p~~~~~~l~~~F~~~Gls~~e~------ 184 (316)
|+|-=.+.+....|+. .+|-..+..+.||.|-..-..... ...+. +-..+.++.+.|++.|+..+=|
T Consensus 149 I~vn~TlvFS~~Qa~~aa~AGa~~ISPfVgRi~d~~~~~~~~-~~~~~~~d~Gv~~v~~i~~~~~~~~~~T~vmaASfRn 227 (313)
T cd00957 149 IHCNLTLLFSFAQAVACAEAGVTLISPFVGRILDWYKKHSGD-KAYTAEEDPGVASVKKIYNYYKKFGYKTKVMGASFRN 227 (313)
T ss_pred CceeeeeecCHHHHHHHHHcCCCEEEeecchHHHhhhhcccc-ccCCccCCcHHHHHHHHHHHHHHcCCCcEEEecccCC
Confidence 4444444454444443 467788899999987542211110 01111 1234777888898999865433
Q ss_pred ----hhccCCccccccccccccccccCCCCCCHHHHHHHhhcCCCCCC---CCC-CCCCCCCCCccChHHHHHHhhcCCC
Q 021171 185 ----VALSGGHTIGFARCSAFRNRIYNATNIDPDFAKERQRTCPSTGG---DSN-LAPFDPTPLTFDGKYFSSLLQKRGL 256 (316)
Q Consensus 185 ----VaLsGaHtiG~~hc~~f~~Rl~~dp~~d~~~~~~L~~~Cp~~~~---~~~-~~~~D~Tp~~FDN~Yy~~l~~~~gl 256 (316)
.+|.|+|.+ |++|...++|... |..-. +.. ....+..+...|...|+--++...|
T Consensus 228 ~~~v~~laG~d~~----------------Ti~p~ll~~L~~~-~~~~~~~l~~~~~~~~~~~~~~~~e~~fr~~~~~d~m 290 (313)
T cd00957 228 IGQILALAGCDYL----------------TISPALLEELKNS-TAKVERKLDPAASKALDIHPNFLDESAFRWALNEDAM 290 (313)
T ss_pred HHHHHHHhCCCeE----------------EcCHHHHHHHHhC-CCccccccCcccccccccccccCCHHHHHHHhCcccc
Confidence 333343322 6788888888653 32100 000 0001112344577777665543321
Q ss_pred cchhhhcccCcchHHHHHHhhhCHHHH
Q 021171 257 LISDQALFNGGSTDGLVKTYSLNFKAF 283 (316)
Q Consensus 257 L~SD~~L~~d~~t~~~V~~~A~d~~~F 283 (316)
.-.++..-++.|+.|+...
T Consensus 291 --------a~ekl~~gir~F~~d~~~L 309 (313)
T cd00957 291 --------AVEKLSEGIRGFAKDAVKL 309 (313)
T ss_pred --------hHHHHHHHHHHHHHHHHHH
Confidence 1122345566666665543
No 25
>PF11895 DUF3415: Domain of unknown function (DUF3415); InterPro: IPR024589 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Peroxidases are found in bacteria, fungi, plants and animals. Fungal ligninases are extracellular haem enzymes involved in the degradation of lignin. They include lignin peroxidases (LiPs), manganese-dependent peroxidases (MnPs) and versatile peroxidases, which combine the substrate-specificity characteristics of the other two []. In MnP, Mn2+ serves as the reducing substrate []. It is commonly thought that the plant polymer lignin is the second most abundant organic compound on Earth, exceeded only by cellulose. Higher plants synthesise vast quantities of insoluble macromolecules, including lignins. Lignin is an amorphous three-dimensional aromatic biopolymer composed of oxyphenylpropane units. Biodegradation of lignins is slow - it is probable that their decomposition is the rate-limiting step in the biospheric carbon-oxygen cycle, which is mediated almost entirely by the catabolic activities of microorganisms. The white-rot fungi are able extensively to decompose all the important structural components of wood, including both cellulose and lignin. Under the proper environmental conditions, white-rot fungi completely degrade all structural components of lignin, with ultimate formation of CO2 and H2O. The first step in lignin degradation is depolymerisation, catalysed by the LiPs (ligninases). LiPs are secreted, along with hydrogen peroxide (H2O2), by white-rot fungi under conditions of nutrient limitation. The enzymes are not only important in lignin biodegradation, but are also potentially valuable in chemical waste disposal because of their ability to degrade environmental pollutants []. To date, 3D structures have been determined for LiP [] and MnP [] from Phanerochaete chrysosporium (White-rot fungus), and for the fungal peroxidase from Arthromyces ramosus []. All these proteins share the same architecture and consist of 2 all-alpha domains, between which is embedded the haem group. The helical topography of LiPs is nearly identical to that of yeast cytochrome c peroxidase (CCP) [], despite the former having 4 disulphide bonds, which are absent in CCP (MnP has an additional disulphide bond at the C terminus). This uncharacterised C-terminal domain is found in fungal ligninases. It is about 80 amino acids in length and associated with Pfam:PF00141.; PDB: 1B85_B 1B82_A 1B80_A 1YYG_A 1YZP_A 1MNP_A 1MN1_A 1YZR_A 1MN2_A 3M8M_A ....
Probab=54.81 E-value=11 Score=29.25 Aligned_cols=19 Identities=16% Similarity=0.258 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHhhcCCCC
Q 021171 282 AFSADFANSMIKMGNINVL 300 (316)
Q Consensus 282 ~F~~~Fa~Am~Km~~lgv~ 300 (316)
+..++|..||.||+.||..
T Consensus 2 ~m~~~F~~am~KlavLG~d 20 (80)
T PF11895_consen 2 KMQSAFKAAMAKLAVLGHD 20 (80)
T ss_dssp HHHHHHHHHHHHHCTTTS-
T ss_pred hHHHHHHHHHHHHHHhcCC
Confidence 3568999999999999864
No 26
>PRK01362 putative translaldolase; Provisional
Probab=28.99 E-value=55 Score=29.86 Aligned_cols=73 Identities=15% Similarity=0.244 Sum_probs=43.1
Q ss_pred hhHHHHHHHHHHHhhhCCCCcccHhHHHHHhhhhHHh--hcCCCCcccCCCCCCCCCcccccccCCCCCCCCCHHHHHHH
Q 021171 96 RGFEVIDLIKKELDKVCKRPVVSCADILAVAARDSVV--ALGGPTWKVPLGRRDSTTANRTLANNDIPSPFLNLTGLISS 173 (316)
Q Consensus 96 ~g~~~i~~iK~~le~~cp~~~VScADiialAar~av~--~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~ 173 (316)
.|++.|..++++ .|++--...+....|+. .+|--++..+.||.|-..- ++..-+.++.+.
T Consensus 89 ~G~~a~~~L~~~--------Gi~v~~T~vfs~~Qa~~Aa~aGa~yispyvgRi~d~g~----------dg~~~i~~~~~~ 150 (214)
T PRK01362 89 EGLKAVKALSKE--------GIKTNVTLIFSANQALLAAKAGATYVSPFVGRLDDIGT----------DGMELIEDIREI 150 (214)
T ss_pred HHHHHHHHHHHC--------CCceEEeeecCHHHHHHHHhcCCcEEEeecchHhhcCC----------CHHHHHHHHHHH
Confidence 377777766543 12222222333333332 3466678999999976421 234457788889
Q ss_pred HHHcCCCcccchh
Q 021171 174 FRRQGLNETDLVA 186 (316)
Q Consensus 174 F~~~Gls~~e~Va 186 (316)
++..|+..+=|+|
T Consensus 151 ~~~~~~~tkilaA 163 (214)
T PRK01362 151 YDNYGFDTEIIAA 163 (214)
T ss_pred HHHcCCCcEEEEe
Confidence 9888977654443
No 27
>TIGR00875 fsa_talC_mipB fructose-6-phosphate aldolase, TalC/MipB family. This model represents a family that includes the E. coli transaldolase homologs TalC and MipB, both shown to be fructose-6-phosphate aldolases rather than transaldolases as previously thought. It is related to but distinct from the transaldolase family of E. coli TalA and TalB. The member from Bacillus subtilis becomes phosphorylated during early stationary phase but not during exponential growth.
Probab=26.47 E-value=44 Score=30.43 Aligned_cols=72 Identities=15% Similarity=0.252 Sum_probs=42.1
Q ss_pred hhHHHHHHHHHHHhhhCCCCcccHhHHHHHhhhhHHh--hcCCCCcccCCCCCCCCCcccccccCCCCCCCCCHHHHHHH
Q 021171 96 RGFEVIDLIKKELDKVCKRPVVSCADILAVAARDSVV--ALGGPTWKVPLGRRDSTTANRTLANNDIPSPFLNLTGLISS 173 (316)
Q Consensus 96 ~g~~~i~~iK~~le~~cp~~~VScADiialAar~av~--~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~ 173 (316)
.|++.|..++++ .|.+--...+....|+. .+|--++..+.||.|...- ++-.-+.++.+.
T Consensus 89 ~Gl~A~~~L~~~--------Gi~v~~T~vfs~~Qa~~Aa~aGa~yispyvgRi~d~g~----------dg~~~v~~~~~~ 150 (213)
T TIGR00875 89 EGLKAVKILKKE--------GIKTNVTLVFSAAQALLAAKAGATYVSPFVGRLDDIGG----------DGMKLIEEVKTI 150 (213)
T ss_pred HHHHHHHHHHHC--------CCceeEEEecCHHHHHHHHHcCCCEEEeecchHHHcCC----------CHHHHHHHHHHH
Confidence 477777666542 12222222333333332 3466678999999877421 234456788889
Q ss_pred HHHcCCCcccch
Q 021171 174 FRRQGLNETDLV 185 (316)
Q Consensus 174 F~~~Gls~~e~V 185 (316)
++..|++.+=|+
T Consensus 151 ~~~~~~~tkIla 162 (213)
T TIGR00875 151 FENHAPDTEVIA 162 (213)
T ss_pred HHHcCCCCEEEE
Confidence 989998876443
No 28
>cd00439 Transaldolase Transaldolase. Enzymes found in the non-oxidative branch of the pentose phosphate pathway, that catalyze the reversible transfer of a dihydroxyacetone group from fructose-6-phosphate to erythrose-4-phosphate yielding sedoheptulose-7-phosphate and glyceraldehyde-3-phosphate. They are members of the class I aldolases, who are characterized by using a Schiff-base mechanism for stabilization of the reaction intermediates.
Probab=23.98 E-value=50 Score=30.85 Aligned_cols=78 Identities=12% Similarity=-0.009 Sum_probs=43.1
Q ss_pred hHHHHHHHHHHHhhhCCCCcccHhHHHHHhhhhHHh--hcCCCCcccCCCCCCCCCcccccccCCCCCCC--CC---HHH
Q 021171 97 GFEVIDLIKKELDKVCKRPVVSCADILAVAARDSVV--ALGGPTWKVPLGRRDSTTANRTLANNDIPSPF--LN---LTG 169 (316)
Q Consensus 97 g~~~i~~iK~~le~~cp~~~VScADiialAar~av~--~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~--~~---~~~ 169 (316)
|++.+..+++. .|++-=.+.+....|+. .+|..++..+.||.|...-......+ +++. .. +.+
T Consensus 128 Gl~A~~~L~~~--------GI~vn~T~vfs~~Qa~~aa~Aga~~ispfvgRid~~~~~~~~~~~--~d~~~~~gi~~~~~ 197 (252)
T cd00439 128 GIPAIKDLIAA--------GISVNVTLIFSIAQYEAVADAGTSVASPFVSRIDTLMDKMLEQIG--LDLRGKAGVAQVTL 197 (252)
T ss_pred HHHHHHHHHHC--------CCceeeeeecCHHHHHHHHHcCCCEEEEeccHHHHHhhhhccccc--cccccCcHHHHHHH
Confidence 66666655432 24433333444444433 56778889999999986553322111 2222 33 446
Q ss_pred HHHHHHHcCCCcccc
Q 021171 170 LISSFRRQGLNETDL 184 (316)
Q Consensus 170 l~~~F~~~Gls~~e~ 184 (316)
+.+.|+..|...+=|
T Consensus 198 ~~~~~~~~~~~tkiL 212 (252)
T cd00439 198 AYKLYKQKFKKQRVL 212 (252)
T ss_pred HHHHHHHhCCCCeEE
Confidence 667777777765433
No 29
>PRK01844 hypothetical protein; Provisional
Probab=23.45 E-value=1.9e+02 Score=21.97 Aligned_cols=29 Identities=7% Similarity=0.171 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHhccchhhhHHHHHhhccC
Q 021171 38 TIKRIVEAAVEKEGRMGASLLRLHFHDCF 66 (316)
Q Consensus 38 ~V~~~v~~~~~~d~~~aa~llRl~FHDc~ 66 (316)
+-|+.+++.++++|.+-...||.-+--.+
T Consensus 24 ~ark~~~k~lk~NPpine~mir~Mm~QMG 52 (72)
T PRK01844 24 IARKYMMNYLQKNPPINEQMLKMMMMQMG 52 (72)
T ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHHhC
Confidence 57889999999999999999999887653
No 30
>COG3763 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.44 E-value=1.2e+02 Score=23.04 Aligned_cols=30 Identities=3% Similarity=0.145 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHhccchhhhHHHHHhhccC
Q 021171 37 PTIKRIVEAAVEKEGRMGASLLRLHFHDCF 66 (316)
Q Consensus 37 ~~V~~~v~~~~~~d~~~aa~llRl~FHDc~ 66 (316)
=+.|+.+.+.++++|.+-...||+.+--.+
T Consensus 23 fiark~~~k~lk~NPpine~~iR~M~~qmG 52 (71)
T COG3763 23 FIARKQMKKQLKDNPPINEEMIRMMMAQMG 52 (71)
T ss_pred HHHHHHHHHHHhhCCCCCHHHHHHHHHHhC
Confidence 378999999999999999999999987653
Done!